LOCUS       DADMJE010000001        79467 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.001, whole genome shotgun sequence.
ACCESSION   DADMJE010000001 DADMJE010000000
VERSION     DADMJE010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 79467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 79467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..79467
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.001"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            414..1616
                     /locus_tag="JN001_000001"
     CDS             414..1616
                     /locus_tag="JN001_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     ATP-binding protein ProV"
                     /protein_id="HAY9051363.1"
                     /translation="MAIKLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGV
                     KDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELRE
                     VRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHS
                     YPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTI
                     VFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFRGVDISQVFSA
                     KDIARRTPNGLIRKTPGFGPRSALKLLQDEDREYGYVIERGNKFVGAVSIDSLKTALT
                     QQQGLDAALIDAPLAVDAQTPLSELLSHVGQAPCAVPVVDEDQQYVGIISKGMLLRAL
                     DREGVNNG"
     gene            1609..2673
                     /gene="proW"
                     /locus_tag="JN001_000002"
     CDS             1609..2673
                     /gene="proW"
                     /locus_tag="JN001_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     permease ProW"
                     /protein_id="HAY9051364.1"
                     /translation="MADQNNPWDTTPAADSAVQSADAWGTPATAPTDGGGADWLTSTP
                     APNVEHFNILDPFHKTLIPLDSWVTEGIDWVVTHFRPVFQGVRVPVDYILNGFQQLLL
                     GMPAPVAIIVFALIAWQISGVGMGVATLVSLIAIGAIGAWSQAMVTLALVLTALLFCI
                     VIGLPLGIWLARSPRAAKIIRPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFA
                     LPPIIRLTILGINQVPADLIEASRSFGASPRQMLFKVQLPLAMPSIMAGVNQTLMLAL
                     SMVVIASMIAVGGLGQMVLRGIGRLDMGLATVGGVGIVILAIILDRLTQAVGRDSRSR
                     GNRRWYTTGPVGLLTRPFIK"
     gene            2731..3723
                     /gene="proX"
                     /locus_tag="JN001_000003"
     CDS             2731..3723
                     /gene="proX"
                     /locus_tag="JN001_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708493.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     substrate-binding protein ProX"
                     /protein_id="HAY9051365.1"
                     /translation="MRHSVLFATAFATLISTQTFAADLPGKGITVNPVQSTITEETFQ
                     TLLVSRALEKLGYTVNKPSEVDYNVGYTLLASGDATFTAVNWTPLHDNMYEAAGGDKK
                     FYREGVFVNGAAQGYLIDKKTADQYKITNIAQLKEPKIAKLFDTNGDGKADLTGCNPG
                     WGCEGAINHQLAAYELTNTVTHNQGNYAAMMADTISRYKEGKPVFYYTWTPYWVSNEL
                     KPGKDVVWLQVPFSALPGDKNADTKLPNGANYGFPVSTMHIVANKAWTEKNPAAAKLF
                     AIMQLPVADINAQNAIMHDGKASEGDIQGHVDGWIKAHQQQFDGWVNEALAAQK"
     gene            4015..5199
                     /locus_tag="JN001_000004"
     CDS             4015..5199
                     /locus_tag="JN001_000004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9051366.1"
                     /translation="MTKPNHELSPALIVLMSIATGLAVASNYYAQPLLDTIARNFSLS
                     ASSAGFIVTAAQLGYAAGLLFLVPLGDMFERRRLIVSMTLLAAGGMLITASSQSLAMM
                     ILGTALTGLFSVVAQILVPLAATLASPDKRGKVVGTIMSGLLLGILLARTVAGLLANL
                     GGWRTVFWVASVLMALMALALWRGLPQMKSETHLNYPQLLGSVFSMFISDKILRTRAL
                     LGCLTFANFSILWTSMAFLLAAPPFNYSDGVIGLFGLAGAAGALGARPAGGFADKGKS
                     HHTTTFGLLLLLLSWLAIWFGHTSVLALIIGILVLDLTVQGVHITNQTVIYRIHPDAR
                     NRLTAGYMTSYFIGGAAGSLISASAWQHGGWAGVCLAGATIALVNLLVWWRGFHRQEA
                     AN"
     gene            5323..6060
                     /locus_tag="JN001_000005"
     CDS             5323..6060
                     /locus_tag="JN001_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HAY9051367.1"
                     /translation="MESPTPQPALGSATFMEGCKDSLPIVISYIPVAFAFGLNATRLG
                     FSPLESVFFSCIIYAGASQFVITAMLAAGSSLWVAALTVMAMDVRHVLYGPSLRSRII
                     QRLQKSKTALWAFGLTDEVFAAATAKLVRNNRRWSENWMIGIAFSSWSSWVFGTVIGA
                     FSGSGLLQGYPAVEAALGFMLPALFMSFLLASFQRKQSLCVTAALVGALAGVTLFSIP
                     VAILAGIVCGCLTALIQAFWQGAPDEL"
     gene            6050..6385
                     /gene="ygaH"
                     /locus_tag="JN001_000006"
     CDS             6050..6385
                     /gene="ygaH"
                     /locus_tag="JN001_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-valine transporter subunit YgaH"
                     /protein_id="HAY9051368.1"
                     /translation="MSYEVLLLGLLVGVANYCFRYLPLRLRVGNARPTKRGAVGILLD
                     TIGIASICALLVVSTAPEVMHDTRRFVPTLVGFAVLGASFYKTRSIIIPTLLSALAYG
                     LAWKVMAII"
     gene            complement(6404..6505)
                     /locus_tag="JN001_000007"
     CDS             complement(6404..6505)
                     /locus_tag="JN001_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005228386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051369.1"
                     /translation="MFNGRKRTIHLGMTSLISADIVTTVTNKVNVLF"
     gene            6476..7006
                     /gene="emrR"
                     /locus_tag="JN001_000008"
     CDS             6476..7006
                     /gene="emrR"
                     /locus_tag="JN001_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter EmrAB
                     transcriptional repressor EmrR"
                     /protein_id="HAY9051370.1"
                     /translation="MDSSFTPIEQMLKFRASRHEDFPYQEILLTRLCMHMQSKLLENR
                     NKMLKAQGINETLFMALITLESQENHSIQPSELSCALGSSRTNATRIADELEKRGWIE
                     RRESDNDRRCLHLQLTEKGHEFLREVLPPQHNCLHQLWSALSTTEKDQLEQITRKLLS
                     RLDQMEQDGVVLEAMS"
     gene            7133..8305
                     /gene="emrA"
                     /locus_tag="JN001_000009"
     CDS             7133..8305
                     /gene="emrA"
                     /locus_tag="JN001_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrA"
                     /protein_id="HAY9051371.1"
                     /translation="MSANAETQTPQQPVKKSGKRKRLLLLLTLLFIIIAVAIGIYWFL
                     VLRHFEETDDAYVAGNQIQIMSQVSGSVTKVWADNTDFVKEGDVLVTLDPTDARQAFE
                     KAKTALASSVRQTHQLMINSKQLQANIEVQKIALAKAQSDYNRRVPLGNANLIGREEL
                     QHARDAVTSAQAQLDVAIQQYNANQAMILGTKLEDQPAVQQAATEVRNAWLALERTRI
                     VSPMTGYVSRRAVQPGAQISPTTPLMAVVPATNMWVDANFKETQIANMRIGQPVTITT
                     DIYGDDVKYTGKVVGLDMGTGSAFSLLPAQNATGNWIKVVQRLPVRIELDQKQLEQYP
                     LRIGLSTLVSVNTTNRDGQVLANKVRSTPVAVSTAREISLAPVNKLIDDIVKANAG"
     gene            8322..9860
                     /gene="emrB"
                     /locus_tag="JN001_000010"
     CDS             8322..9860
                     /gene="emrB"
                     /locus_tag="JN001_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrB"
                     /protein_id="HAY9051372.1"
                     /translation="MQQQKPLEGAQLVIMTIALSLATFMQVLDSTIANVAIPTIAGNL
                     GSSLSQGTWVITSFGVANAISIPLTGWLAKRVGEVKLFLWSTIAFAIASWECGVSSSL
                     NMLIFFRVIQGIVAGPLIPLSQSLLLNNYPPAKRSIALALWSMTVIVAPICGPILGGY
                     ISDNYHWGWIFFINVPIGVAVVLMTLQTLRGRETRTERRRIDAVGLALLVIGIGSLQI
                     MLDRGKELDWFSSQEIIILTVVAVVAICFLIVWELTDDNPIVDLSLFKSRNFTIGCLC
                     ISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLASAPVGIIPVILSPIIGRFAHKLDMR
                     RLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQFIQGFAVACFFMPLTTITLSGLPP
                     ERLAAASSLSNFTRTLAGSIGTSITTTMWTNRESMHHAQLTESVNPFNPNAQAMYSQL
                     EGLGMTQQQASGWIAQQITNQGLIISANEIFWMSAGIFLVLLGLVWFAKPPFGAGGGG
                     GGAH"
     gene            complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JN001_000011"
     CDS             complement(9924..10439)
                     /gene="luxS"
                     /locus_tag="JN001_000011"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008458247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HAY9051373.1"
                     /translation="MPLLDSFTVDHTRMEAPAVRVAKTMNTPHGDAITVFDLRFCVPN
                     KEVMPERGSHTLEHLFAGFMRNHLNGNGVEIIDISPMGCRTGFYMSLIGTPDEQRVAD
                     AWKAAMEDVLKVQDQNQIPELNVYQCGTYQMHSLQEAQDIARSILERDVRINSNEELA
                     LPKEKLQELHI"
     gene            complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JN001_000012"
     CDS             complement(10589..12145)
                     /gene="gshA"
                     /locus_tag="JN001_000012"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY9051374.1"
                     /translation="MIPDVSQALAWLEKHPQALKGIQRGLERETLRVNADGTQATTGH
                     PEALGSALTHKWITTDFAEALLEFITPVDGDIEHMLTFMRDLHRYTARNMGDERMWPL
                     SMPCYIAEGQDIELAQYGTSNTGRFKTLYREGLKNRYGALMQTISGVHYNFSLPMAFW
                     QAKCCDISGTDAKEKISAGYFRVIRNYYRFGWVIPYLFGASPAICSSFLQGKPTSLPF
                     EKTECGMYYLPYATSLRLSDLGYTNKSQSNLGITFNDLYEYVAGLKQAIKTPSEEYAK
                     IGIEKDGKRLQINSNVLQIENELYAPIRPKRVTRSGESPSDALLRGGIEYIEVRSLDI
                     NPFSPIGVDEQQVRFLDLFMVWCALADAPEMSSSELACTRVNWNRVILEGRKPGLTLG
                     IGCETAQFPLPQVGKDLFRDLKRVAQTLDSINGGKAYQKVCDELVACFDNPDLTFSAR
                     ILRSMIDTGIGGTGKAFAEAYRNLLREEPLEILREEDFVAEREASERRQQEMETADTE
                     PFAVWLEKHA"
     gene            complement(12218..12646)
                     /locus_tag="JN001_000013"
     CDS             complement(12218..12646)
                     /locus_tag="JN001_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9051375.1"
                     /translation="MSEALSLFSLFASSFLSATLLPGNSEVVLVAMLLSGISYPWVLV
                     LTATMGNSLGGLTNVILGRFFPLRKTSRWQEKATGWLKRYGAVTLLLSWMPVVGDLLC
                     LLAGWMRISWGPVIFFLCLGKALRYVAVAAATVQGMMWWH"
     gene            complement(12643..13198)
                     /gene="yqaB"
                     /locus_tag="JN001_000014"
                     /pseudo
     CDS             complement(12643..13198)
                     /gene="yqaB"
                     /locus_tag="JN001_000014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311579.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1-phosphate/6-phosphogluconate
                     phosphatase"
     gene            complement(13346..13422)
                     /locus_tag="JN001_000015"
     tRNA            complement(13346..13422)
                     /locus_tag="JN001_000015"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13386..13388),aa:Arg,seq:acg)
     gene            complement(13621..13697)
                     /locus_tag="JN001_000016"
     tRNA            complement(13621..13697)
                     /locus_tag="JN001_000016"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13661..13663),aa:Arg,seq:acg)
     gene            complement(13895..13971)
                     /locus_tag="JN001_000017"
     tRNA            complement(13895..13971)
                     /locus_tag="JN001_000017"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13935..13937),aa:Arg,seq:acg)
     gene            complement(13975..14067)
                     /locus_tag="JN001_000018"
     tRNA            complement(13975..14067)
                     /locus_tag="JN001_000018"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(14031..14033),aa:Ser,seq:gct)
     gene            complement(14383..14568)
                     /gene="csrA"
                     /locus_tag="JN001_000019"
     CDS             complement(14383..14568)
                     /gene="csrA"
                     /locus_tag="JN001_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon storage regulator CsrA"
                     /protein_id="HAY9051376.1"
                     /translation="MLILTRRVGETLMIGDEVTVTVLGVKGNQVRIGVNAPKEVSVHR
                     EEIYQRIQAEKSQQSSY"
     gene            complement(14803..17433)
                     /gene="alaS"
                     /locus_tag="JN001_000020"
     CDS             complement(14803..17433)
                     /gene="alaS"
                     /locus_tag="JN001_000020"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HAY9051377.1"
                     /translation="MSKSTAEIRQAFLDFFHSKGHQVVASSSLVPHNDPTLLFTNAGM
                     NQFKDVFLGLDKRNYSRATTSQRCVRAGGKHNDLENVGYTARHHTFFEMLGNFSFGDY
                     FKHDAIQFAWELLTSEKWFALPKERLWVTVYESDDEAYEIWEKEVGIPRERIIRIGDN
                     KGAPYASDNFWQMGDTGPCGPCTEIFYDHGDHIWGGPPGSPEEDGDRYIEIWNIVFMQ
                     FNRQADGTMEPLPKPSVDTGMGLERIAAVLQHVNSNYDIDLFRTLIQAVAKVTGATDL
                     SNKSLRVIADHIRSCAFLIADGVMPSNENRGYVLRRIIRRAVRHGNMLGAKETFFYKL
                     VGPLIDVMGSAGEDLKRQQAQVEQVLKTEEEQFARTLERGLALLDEELAKLSGDTLDG
                     ETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRAREASGFGADYNAMI
                     RVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGD
                     KGELKDANFSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSA
                     THLMHAALRQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEEIRAVEDLVNAQIRRNL
                     PIETNIMDLEAAKAKGAMALFGEKYDERVRVLSMGDFSTELCGGTHASRTGDIGLFRI
                     ISESGTAAGVRRIEAVTGEGAITTVHADSDRLSEVAHLLKGDSNNLADKVRSVLERTR
                     QLEKELQQLKEQAAAQESANLSSKAIDVNGVKLLVSELSGVEPKMLRTMVDDLKNQLG
                     STIIVLATVAEGKVSLIAGVSKDVTDRVKAGELIGMVAQQVGGKGGGRPDMAQAGGTD
                     AAALPAALASVKGWVSAKLQ"
     gene            complement(17561..18061)
                     /gene="recX"
                     /locus_tag="JN001_000021"
     CDS             complement(17561..18061)
                     /gene="recX"
                     /locus_tag="JN001_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HAY9051378.1"
                     /translation="MTESTSRRPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKN
                     GPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKGYGPARIRQELNQKGIS
                     REATEKAMRECDIDWCALARDQATRKYDEPLPTVFSEKVKIQRFLLYRGYLMEDIQDI
                     WRNFAD"
     gene            complement(18304..19365)
                     /gene="recA"
                     /locus_tag="JN001_000022"
     CDS             complement(18304..19365)
                     /gene="recA"
                     /locus_tag="JN001_000022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HAY9051379.1"
                     /translation="MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTG
                     SLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDP
                     IYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAALTPKAEIEGEI
                     GDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKIGVMFGNPETTTGGNALKF
                     YASVRLDIRRIGAVKEGENVVGSETRVKVVKNKIAAPFKQAEFQILYGEGINFYGELV
                     DLGVKEKLIEKAGAWYSYKGEKIGQGKANATAWLKDNPETAKEIEKKVRELLLSNPNS
                     TPDFSVDDSEGVAETNEDF"
     gene            complement(19445..19942)
                     /gene="pncC"
                     /locus_tag="JN001_000023"
     CDS             complement(19445..19942)
                     /gene="pncC"
                     /locus_tag="JN001_000023"
                     /EC_number="3.5.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide-nucleotide amidase"
                     /protein_id="HAY9051380.1"
                     /translation="MTDSELMQLSEQVGQALKARGATVTTAESCTGGWVAKVITDIAG
                     SSAWFERGFVTYSNEAKAQMIGVREETLAQHGAVSEPVVVEMVIGALKAARADYAVSI
                     SGIAGPDGGSEEKPVGTVWFAFATARGEGITRRECFSGDRDAVRRQATAYALQTLWQQ
                     FLQNT"
     gene            complement(20087..21172)
                     /gene="mltB"
                     /locus_tag="JN001_000024"
     CDS             complement(20087..21172)
                     /gene="mltB"
                     /locus_tag="JN001_000024"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase B"
                     /protein_id="HAY9051381.1"
                     /translation="MFKRRYVTLFPLFVLLAACSSKPKPTETETTTGTPSGGFLLEPQ
                     HNVMQMGGDFANNPNAQQFIDKMVNKHGFDRQQLQEILSQAKRLDSVLRLMDNQAPTT
                     SVKPPSGPNGAWLRYRKKFITPDNVQNGVVFWNQYEDALNRAWQVYGVPPEIIVGIIG
                     VETRWGRVMGKTRILDALATLSFNYPRRAEYFSGELETFLLMARDEQDDPLNLKGSFA
                     GAMGYGQFMPSSYKQYAVDFSGDGHINLWDPVDAIGSVANYFKAHGWVKGDQVAVMAN
                     GQAPGLPNGFKTRYSISQLATAGLTPQQPLGNHQQASLLRLDVGTGYQYWYGLPNFYT
                     ITRYNHSTHYAMAVWQLGQAVALARVQ"
     gene            21428..21991
                     /gene="srlA"
                     /locus_tag="JN001_000025"
                     /gene_synonym="gutA"
     CDS             21428..21991
                     /gene="srlA"
                     /locus_tag="JN001_000025"
                     /gene_synonym="gutA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HAY9051382.1"
                     /translation="MIETITHGAEWFIGLFQKGGEVFTGMVTGILPLLISLLVIMNAL
                     INFIGQHRIERFAQRCAGNPVSRYLLLPCIGTFVFCNPMTLSQGRFMPEKYKPSYYAA
                     ASYSCHSMNGLFPHINPGELFVYLGIASGLTTLNLPLGPLAVSYLLVGLVTNFFRGWV
                     TDLTTAIFEKKMGIQLEQKVHLAGATS"
     gene            21988..22947
                     /gene="srlE"
                     /locus_tag="JN001_000026"
                     /gene_synonym="gutE"
     CDS             21988..22947
                     /gene="srlE"
                     /locus_tag="JN001_000026"
                     /gene_synonym="gutE"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HAY9051383.1"
                     /translation="MTRIRIEKGTGGWGGPLELEATPGKKIVYITAGTRPAIVDKLAQ
                     LTGWQAIDGFKEGEPAEAEIGVAVIDCGGTLRCGIYPKRRIPTINIHSTGKSGPLAQY
                     IVEDIYVSGVKEENITVVGDATPQPSSVGRDYDTSKKITEQSDGLLAKVGMGMGSAVA
                     VLFQSGRDTIDTVLKTILPFMAFVSALIGIIMASGLGDWIAHGLAPLASHPLGLVMLA
                     LICSFPLLSPFLGPGAVIAQVIGVLIGVQIGLGNIPPHLALPALFAINAQAACDFIPV
                     GLSLAEARQDTVRVGVPSVLVSRFLTGAPTVLIAWFVSGFIYQ"
     gene            22958..23329
                     /gene="srlB"
                     /locus_tag="JN001_000027"
                     /gene_synonym="gutB"
     CDS             22958..23329
                     /gene="srlB"
                     /locus_tag="JN001_000027"
                     /gene_synonym="gutB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HAY9051384.1"
                     /translation="MTVIYKTTITRIGASATDALSDQMLITFREGAPADLEEYCFIHC
                     HGELKGALHPGLQFTLGQHRYPVTAVGSVAEDNLRELGHVTLRFDGLNEAEFPGTVHV
                     AGPVPDDIAPGSVLKFESVKE"
     gene            23333..24112
                     /gene="srlD"
                     /locus_tag="JN001_000028"
     CDS             23333..24112
                     /gene="srlD"
                     /locus_tag="JN001_000028"
                     /EC_number="1.1.1.140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbitol-6-phosphate dehydrogenase"
                     /protein_id="HAY9051385.1"
                     /translation="MNQVAVVIGGGQTLGAFLCHGLVAEGYRVAVVDIQSDKAANVAQ
                     EINAEYGESMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYSAGIAKAAFISDFQL
                     GDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFG
                     GVGLTQSLALDLVEYGITVHSLMLGNLLKSPMFQSLLPQYATKLGIKPDQVEQYYIDK
                     VPLKRGCDYQDVLNMLLFYASPKASYCTGQSINVTGGQVMF"
     gene            24217..24575
                     /gene="gutM"
                     /locus_tag="JN001_000029"
                     /pseudo
     CDS             24217..24575
                     /gene="gutM"
                     /locus_tag="JN001_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417186.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
     gene            24642..25415
                     /gene="srlR"
                     /locus_tag="JN001_000030"
                     /gene_synonym="gutR"
     CDS             24642..25415
                     /gene="srlR"
                     /locus_tag="JN001_000030"
                     /gene_synonym="gutR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucitol operon DNA-binding transcriptional
                     repressor SrlR"
                     /protein_id="HAY9051386.1"
                     /translation="MKPRQRQAAILEYLQKQGKCSVEELAQYFDTTGTTIRKDLVILE
                     HAGTVIRTYGGVVLNKEESDPPIDHKTLINTHKKELIAEAAVSFIHDGDSIILDAGST
                     VLQMVPLLSRFNNITVMTNSLHIVNALSELDNEQTILMPGGTFRKKLASFHGQLAENA
                     FEHFSFDKLFMGTDGIDLNAGVTTFNEVYTVSKAMCNAAREVILMADSSKFGRKSPNV
                     VCSLESVDKLITDAGIDPAFRQALEEKGIDVIITGESNE"
     gene            25408..26373
                     /gene="gutQ"
                     /locus_tag="JN001_000031"
     CDS             25408..26373
                     /gene="gutQ"
                     /locus_tag="JN001_000031"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311591.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase GutQ"
                     /protein_id="HAY9051387.1"
                     /translation="MSEALLNAGRQTLMLELQEASRLPERLGDDFVRAANIILHCEGK
                     VVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGA
                     KELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNT
                     LMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASV
                     MDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTL
                     QAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII"
     gene            complement(26370..27884)
                     /gene="norR"
                     /locus_tag="JN001_000032"
     CDS             complement(26370..27884)
                     /gene="norR"
                     /locus_tag="JN001_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311592.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide reductase transcriptional regulator
                     NorR"
                     /protein_id="HAY9051388.1"
                     /translation="MSFSVDVLANIAIELQRGIGHQDRFQRLITTLRQVLECDASALL
                     RYDSRQFIPLAIDGLAKGVLGRRFALEGHPRLEAIARAGDVVRFPADSELPDPYDGLI
                     PGQESLKVHACVGLPLFAGQNLIGALTLDGMQPDQFDVFSDEELRLIAALAAGALSNA
                     LLIEQLESQNMMPGDATPFEAVKQTQMIGLSPGMTQLKKEIEIVAASDLNVLISGETG
                     TGKELVAKAIHEASPRAVNPLVYLNCAALPESVAESELFGHVKGAFTGAISNRSGKFE
                     MADNGTLFLDEIGELSLALQAKLLRVLQYGDIQRVGDDRSLRVDVRVLAATNRDLREE
                     VLAGRFRADLFHRLSVFPLSVPPLRERGDDVILLAGYFCEQCRLRLGLSRVVLSAGAR
                     NLLQHYRFPGNVRELEHAIHRAVVLARATRNGDEVILEAQHFAFPEVTLPPPEAAAVP
                     VVKQNLREATEAFQRETIRQALAQNHHNWAACARMLETDVANLHRLAKRLGMKD"
     gene            28071..29510
                     /gene="norV"
                     /locus_tag="JN001_000033"
     CDS             28071..29510
                     /gene="norV"
                     /locus_tag="JN001_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic nitric oxide reductase
                     flavorubredoxin"
                     /protein_id="HAY9051389.1"
                     /translation="MSIVVKNNIHWVGQRDWEVRDFHGTEYKTLRGSSYNSYLIREEK
                     NVLIDTVDHKFSREFVQNLRNEIDLADIDYIVINHAEEDHAGALTELMAQIPDTPIYC
                     TANAIDSINGHHHHPEWNFNVVKTGDTLDIGNGKQLIFVETPMLHWPDSMMTYLTGDA
                     VLFSNDAFGQHYCDEHLFNDEVDQTELFEQCQRYYANILTPFSRLVTPKITEILGFNL
                     PVDMIATSHGVVWRDNPTQIVELYLKWAADYQEDRITIFYDTMSNNTRMMADAIAQGI
                     AETDPRVAVKIFNVARSDKNEILTNVFRSKGVLVGTSTMNNVMMPKIAGLVEEMTGLR
                     FRNKRASAFGSHGWSGGAVDRLSTRLQDAGFEMSLSLKAKWRPDQDALELCREHGREI
                     ARQWALAPLPQSTVNKVVKEETSATTTADLGPRMQCSVCQWIYDPAKGEPMQDVAPGT
                     PWSEVPDNFLCPECSLGKDVFEELASEAK"
     gene            29507..30640
                     /gene="norW"
                     /locus_tag="JN001_000034"
                     /pseudo
     CDS             29507..30640
                     /gene="norW"
                     /locus_tag="JN001_000034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417191.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADH:flavorubredoxin reductase NorW"
     gene            complement(30768..33020)
                     /gene="hypF"
                     /locus_tag="JN001_000035"
     CDS             complement(30768..33020)
                     /gene="hypF"
                     /locus_tag="JN001_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyltransferase HypF"
                     /protein_id="HAY9051390.1"
                     /translation="MAKNTSCGVQLRIRGKVQGVGFRPFVWQLAQQLNLHGDVCNDGD
                     GVEVRLREDPETFLVQLHQHCPPLARIDSVEREPYIWSQLPTEFTIRQSAGGAMNTQI
                     VPDAATCPACLAEMNTPGERRYRYPFINCTHCGPRFTIIRAMPYDRPFTVMAAFPLCP
                     ACDKEYRDPLDRRFHAQPVACPECGPHLEWVSHGEHAEQEAALQAAIAQLKMGNIVAI
                     KGIGGFHLACDARNSNAVATLRARKHRPAKPLAVMLPVADGLPDAARQLLTTPAAPIV
                     LVDKKYVPELCDDIAPDLNEVGVMLPANPLQHLLLQELQCPLVMTSGNLSGKPPAISN
                     EQALADLQGIADGFLIHNRDIVQRMDDSVVRESGEMLRRSRGYVPDALALPPGFKNVP
                     PVLCLGADLKNTFCLVRGEQAVLSQHLGDLSDDGIQMQWREALRLMQNIYDFTPKYVV
                     HDAHPGYVSSQWAREMNLPTQTVLHHHAHAAACLAEHQWPLDGGDVIALTLDGIGMGE
                     NGALWGGECLRVNYRECEHLGGLPAVALPGGDLAAKQPWRNLLAQCLRFVPEWQNYPE
                     TASVQQQNWSVLARAIERGINAPLASSCGRLFDAVAAALGCAPATLSYEGEAACALEA
                     LAASCHGVTHPVTMPLVDNQLDLAAFWQQWLNWQAQVNQRAWAFHDALAQGFAALMRE
                     QATMRGITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA
                     RWLAGEVQNG"
     gene            complement(33173..33700)
                     /gene="hydN"
                     /locus_tag="JN001_000036"
     CDS             complement(33173..33700)
                     /gene="hydN"
                     /locus_tag="JN001_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport protein HydN"
                     /protein_id="HAY9051391.1"
                     /translation="MNRFIIADASKCIGCRTCEVACVVSHQENQDCASLTPETFLPRI
                     HVIKGVNISTATVCRQCEDAPCANVCPNGAISRDKGFVHVMQERCIGCKTCVVACPYG
                     AMEVVVRPVIRNSGAGLNVRADKAEANKCDLCNHREDGPACMAACPTHALICVDRNKL
                     EQLSAEKRRRTALMF"
     gene            complement(33849..34859)
                     /locus_tag="JN001_000037"
     CDS             complement(33849..34859)
                     /locus_tag="JN001_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY9051392.1"
                     /translation="MTTMLEVAKRAGVSKATVSRVLSGNGYVSQETKDRVFQAVEESG
                     YRPNLLARNLSAKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADGKHS
                     AEEERQAIQYLLDLRCNAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVW
                     CDHKQTSFNAVAELINAGHQEIAFLTGSMDSPTSIERLAGYKDALAQHGIALNEKLIA
                     NGKWTPASGAEGVETLLERGAKFSALVASNDDMAIGAMKALHERGVAVPEQVSVIGFD
                     DIAIAPYIVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTFSGKLIHRDSLIAL
                     SR"
     gene            35119..36576
                     /gene="ascF"
                     /locus_tag="JN001_000038"
     CDS             35119..36576
                     /gene="ascF"
                     /locus_tag="JN001_000038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose/arbutin/salicin transporter
                     subunit IIBC"
                     /protein_id="HAY9051393.1"
                     /translation="MAKNYAALARSEIAALGGVDNISAVTHCMTRLRFVIKDDQLIDS
                     PTLKTIPGVLGVVRSDNQCQVIIGNTVSQAFQEVVSLLPGDMQPAQPVGKPKLTPRRI
                     GAGILDALIGTMSPLIPAIIGGSMVKLLAMILEMSGVLTKGSPTLTILNVIGDGAFFF
                     LPLMVAASADIKFKTNMSLAIAIAGVLVHPSFIELMAKAAQGEHVEFALIPVTAVKYT
                     YTVIPALVMTWCLSYIERWVDRITPAVTKNFLKPMLIVLIAAPLAILLIGPIGIWIGS
                     AISALVYSIHGYLGWLSVAIMGALWPLLVMTGMHRVFTPTIIQTIAETGKEGMVMPSE
                     IGANLSLGGSSLAVAWKTKNPELRQTALAAAASAIMAGISEPALYGVAIRLKRPLIAS
                     LISGFICGAVAGMAGLASHSMAAPGLFTSVQFFDPANPMSIVWVFAVMALAVVLSFIL
                     TLLLGFEDIPVEEAAAQARKHQSVQPTVAKEVSLN"
     gene            36585..38009
                     /locus_tag="JN001_000039"
     CDS             36585..38009
                     /locus_tag="JN001_000039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY9051394.1"
                     /translation="MSVFPEGFLWGGALAANQSEGAFREGGKGLTTVDMIPHGEHRMA
                     VKLGLEKRFQLRDDEFYPSHEATDFYHRYKEDIALMAEMGFKVFRTSIAWSRLFPQGD
                     EITPNQQGIAFYRSVFEECKKYGIEPLVTLCHFDVPMHLVTEYGSWRNRKLVEFFSRY
                     ARTCFEAFDGLVKYWLTFNEINIMLHSPFSGAGLVFEEGENQDQVKYQAAHHQLVASA
                     LAAKIAHEVNPQNQVGCMLAGGNFYPYSCKPEDVWAALEKDRENLFFIDVQARGAYPA
                     YSARVFREKGVTIDKALGDDEILKNTVDFVSFSYYASRCASAEMNANNSSAANVVKSL
                     RNPYLQVSDWGWGIDPLGLRITMNMMYDRYQKPLFLVENGLGAKDELAANGEINDDYR
                     ISYLREHIRAMGEAIADGIPLMGYTTWGCIDLVSASTGEMSKRYGFVYVDRDDAGNGT
                     LTRTRKKSFWWYKKVIASNGEDLE"
     gene            complement(38168..38638)
                     /gene="hycI"
                     /locus_tag="JN001_000040"
     CDS             complement(38168..38638)
                     /gene="hycI"
                     /locus_tag="JN001_000040"
                     /EC_number="3.4.23.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation peptidase HycI"
                     /protein_id="HAY9051395.1"
                     /translation="MTDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE
                     NDIVAIRELRPTRLLIVDATDMGLNPGEIRIIDPDDIAEMFMMTTHNMPLNYLIDQLK
                     EDIGEVIFLGIQPDIVGFYYPMTQPIKDAVETVYQRLEGWEGNGGFAQLAVEEE"
     gene            complement(38631..39041)
                     /locus_tag="JN001_000041"
     CDS             complement(38631..39041)
                     /locus_tag="JN001_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HycH family protein"
                     /protein_id="HAY9051396.1"
                     /translation="MSEKVVFSQLSRKFIDENDATPAEAQQVVYYSLAIGHHLGVIDC
                     LEAALTCPWDEYLAWIATLEAGSEARRKMEGVPKYGEIVIDINHVPMLANAFDKARAA
                     QTSQQQEWSTMLLSMLHDIHQENAIYLMVRRLRD"
     gene            complement(39038..39805)
                     /gene="hycG"
                     /locus_tag="JN001_000042"
     CDS             complement(39038..39805)
                     /gene="hycG"
                     /locus_tag="JN001_000042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycG"
                     /protein_id="HAY9051397.1"
                     /translation="MSNLLGPRDANGIPVPMTVDESIASMKASLLKKIKRSAYVYRVD
                     CGGCNGCEIEIFATLSPLFDAERFGIKVVPSPRHADILLFTGAVTRAMRSPALRAWQS
                     APDPKICISYGACGNSGGIFHDLYCVWGGTDKIVPVDVYIPGCPPTPAATLYGFAMAL
                     GLLEQKIHARGPGELDEQPAEILHGDMVQPLRVKVDREARRLAGYRYGRQIADDFLTQ
                     LGQGEEQVARWLEAENDPRLNEIVSHLNHVVEEVRIR"
     gene            complement(39805..40347)
                     /gene="hycF"
                     /locus_tag="JN001_000043"
     CDS             complement(39805..40347)
                     /gene="hycF"
                     /locus_tag="JN001_000043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycF"
                     /protein_id="HAY9051398.1"
                     /translation="MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEQNPQQCIGCA
                     ACVNACPSNALTVETDLATGELAWEFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWK
                     KEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLKHNGDSRAENHRESFETCPECKR
                     QKCLVPSDRIELTRHMKEAI"
     gene            complement(40357..42066)
                     /locus_tag="JN001_000044"
     CDS             complement(40357..42066)
                     /locus_tag="JN001_000044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase large subunit"
                     /protein_id="HAY9051399.1"
                     /translation="MSEEKLGQHYLAALNEAFPGVVLDHAWQTKDQLTVTVKVNYLPE
                     VVEFLYYKQGGWLSVLFGNDERKLNGHYAVYYVLSMEKGTKCWVTVRVEVDANKPEYP
                     SVTPRVPAAVWGEREVRDMYGLIPVGLPDERRLVLPDDWPDELYPLRKDSMDYRQRPA
                     PTTDAETYEFINELGDKKNNVVPIGPLHVTSDEPGHFRLFVDGENIIDADYRLFYVHR
                     GMEKLAETRMGYNEVTFLSDRVCGICGFAHSTAYTTSVENAMGIQVPERAQMIRAILL
                     EVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTGARKTYGLNLIGGIR
                     RDLLKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIGRLDPEIARDFSNVGP
                     MVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINEVYTALNMIDYGLD
                     NLPGGPLMVEGFTYIPHRFALGFAEAPRGDDIHWSMTGDNQKLYRWRCRAATYANWPT
                     LRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRKKKSKVVPYKELERYSIERKNS
                     PLK"
     gene            complement(42084..43007)
                     /gene="hycD"
                     /locus_tag="JN001_000045"
     CDS             complement(42084..43007)
                     /gene="hycD"
                     /locus_tag="JN001_000045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit HycD"
                     /protein_id="HAY9051400.1"
                     /translation="MSVLYPLIQALVLFAVAPLLSGITRVARARLHNRRGPGVLQEYR
                     DIIKLLGRQSVGPDASGWVFRLTPYVMVGVMLTIATALPVVTVGSPLPQLGDLITLLY
                     LFAIARFFFAISGLDTGSPFTAIGASREAMLGVLVEPMLLLGLWVAAQVAGSTNISNI
                     TDTVYHWPLSQSIPLVLALCACAFATFIEMGKLPFDLAEAEQELQEGPLSEYSGSGFG
                     VMKWGISLKQLVVLQMFVGVFIPWGQMETFTAGGLLLALVIAIVKLVVGVLVIALFEN
                     SMARLRLDITPRITWAGFGFAFLAFVSLLAA"
     gene            complement(43010..44641)
                     /gene="hycC"
                     /locus_tag="JN001_000046"
     CDS             complement(43010..44641)
                     /gene="hycC"
                     /locus_tag="JN001_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001274449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase subunit 3"
                     /protein_id="HAY9051401.1"
                     /translation="MTIWEISEKADYIAQRHRRLQDQWHIYCNSLVQGITLSKARLHH
                     AMSCAPDKELCFVLFEHFRIYVTLADGFNSHTIEYYVETKEGKLWFALGRLGTLLLAI
                     ACWLLWQRYGTLDLRLLDMRMQQLPLGSDIWLLGVIGFGLLAGIIPLHGWVPQAHANA
                     SAPAAALFSTVVMKIGLLGILTLSLLGGNAPLWWGIVLLVLGMITAFVGGLYALMEHN
                     IQRLLAYHTLENIGIILLGLGAGVTGIALEQPALIALGLVGGLYHLLNHSLFKSVLFL
                     GAGSVWFRTGHRDIEKLGGIGKKMPVISIAMLVGLMAMAALPPLNGFAGEWVIYQSFF
                     KLSNSGAFVARLLGPLLAVGLAITGALAVMCMAKVYGVTFLGAPRTKEAENATCAPLL
                     MSVSVVALAICCVIGGVAAPWLLPMLSAAVPLPLEPANTTVSQPMITLLLIACPLLPF
                     IIMAICKGDRLPSRSRGAAWVCGYDHEKSMVITAHGFAMPVKQAFAPVLKLRKWLNPV
                     SLVPGWQCEGSALLFRRMALVELAVLVVIIVSRGA"
     gene            44853..45203
                     /gene="hypA"
                     /locus_tag="JN001_000047"
     CDS             44853..45203
                     /gene="hypA"
                     /locus_tag="JN001_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY9051402.1"
                     /translation="MHEITLCQRALELIEQQAAKHGAKRVTGVWLKIGAFSCVETSSL
                     AFCFDLVCRGSVAEGCKLHLEEQEVECWCETCQQYVTLLTQRVRRCPQCHGDMLQIVA
                     DDGLQIRRIEIDQE"
     gene            45207..46079
                     /gene="hypB"
                     /locus_tag="JN001_000048"
     CDS             45207..46079
                     /gene="hypB"
                     /locus_tag="JN001_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase nickel incorporation protein HypB"
                     /protein_id="HAY9051403.1"
                     /translation="MCTTCGCGEGNLYIEGDEHNPHSAFRSAPFAPAARPKMKITGIK
                     APEFTPSQTEEGDLHYGHGEAGTHAPGMSQRRMLEVEIDVLDKNNRLAERNRARFAAR
                     KQLVLNLVSSPGSGKTTLLTETLMRLKDSVPCAVIEGDQQTVNDAARIRATGTPAIQV
                     NTGKGCHLDAQMIADAAPRLPLDDNGILFIENVGNLVCPASFDLGEKHKVAVLSVTEG
                     EDKPLKYPHMFAAASLMLLNKVDLLPYLNFDVEKCIACAREVNPEIEIILISATSGEG
                     MDQWLNWLETQRCA"
     gene            46070..46342
                     /gene="hypC"
                     /locus_tag="JN001_000049"
     CDS             46070..46342
                     /gene="hypC"
                     /locus_tag="JN001_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 3 maturation protein HypC"
                     /protein_id="HAY9051404.1"
                     /translation="MCIGVPGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRV
                     GQWVLVHVGFAMSVITEAEARDTLDALQNMFDVEPDVGALLYGEEK"
     gene            46342..47463
                     /gene="hypD"
                     /locus_tag="JN001_000050"
     CDS             46342..47463
                     /gene="hypD"
                     /locus_tag="JN001_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase formation protein HypD"
                     /protein_id="HAY9051405.1"
                     /translation="MRFVDEYRAPEQVMQLIEHLRERASHLSYTAERPLRIMEVCGGH
                     THAIFKFGLDQLLPENVEFIHGPGCPVCVLPMGRIDTCVEIASHPEVIFCTFGDAMRV
                     PGKQGSLLQAKARGADVRIVYSPMDALKLAQENPTRKVVFFGLGFETTMPTTAITLQQ
                     AKARDVQNFYFFCQHITLIPTLRSLLEQPDNGIDAFLAPGHVSMVIGTDAYNFIASDF
                     HRPLVVAGFEPLDLLQGVVMLVEQKIAAHSKVENQYRRVVPDAGNLLAQQAIADVFCV
                     NGDSEWRGLGVIESSGVHLTPDYQRFDAEAHFRPAPQQVCDDPRARCGEVLTGKCKPH
                     QCPLFGNTCNPQTAFGALMVSSEGACAAWYQYRQQESEA"
     gene            47460..48470
                     /gene="hypE"
                     /locus_tag="JN001_000051"
     CDS             47460..48470
                     /gene="hypE"
                     /locus_tag="JN001_000051"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311613.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation carbamoyl dehydratase
                     HypE"
                     /protein_id="HAY9051406.1"
                     /translation="MNNIQLAHGSGGQAMQQLINSLFMEAFANPWLAEQEDQARLDLA
                     QLVAEGDRLAFSTDSYVIDPLFFPGGNIGKLAICGTANDVAVSGAIPCYLSCGFILEE
                     GLPMETLKAVVTSMAETARTAGIAIVTGDTKVVQRGAADKLFINTAGMGAIPANIHWG
                     AQTLTAGDVLLVSGTLGDHGATILNLREQLGLDGELVSDCAVLTPLIQTLRDIPGVKA
                     LRDATRGGVNAVVHEFAAACGCGIEISESALPVKPAVRGVCELLGLDALNFANEGKLV
                     IAVERNAAEQVLAALHSHPLGKDAALIGEVVERKGVRLAGLYGVKRTLDLPHAEPLPR
                     IC"
     gene            48544..50622
                     /gene="flhA"
                     /locus_tag="JN001_000052"
     CDS             48544..50622
                     /gene="flhA"
                     /locus_tag="JN001_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase transcriptional activator
                     FlhA"
                     /protein_id="HAY9051407.1"
                     /translation="MSYTPMSDLGQQGLFDITRTLLQQPDLASLCEALSQLVKRSALA
                     DNAAIVLWQAQTQRASYYASREKDTPIKYEDETVLAHGPVRRILSRPDTLHCSYEEFC
                     ETWPQLVAGGLYPKFGHYCLMPLAAEGHIFGGCEFIRYDDRPWSEKEFNRLQTFTQIV
                     SVVTEQIQSRVVNNVDYELLCRERDNFRILVAITNAVLSRLDMDELVSEVAKEIHYYF
                     DIDDISIVLRSHRKNKLNIYSTHYLDKQHPAHEQSEVDEAGTLTERVFKSKEMLLINL
                     HERDDLAPYERMLFDTWGNQIQTLCLLPLMSGDTMLGVLKLAQCEEKVFTTTNLNLLR
                     QIAERVAIAVDNALAYQEIHRLKERLVDENLALTEQLNNVDSEFGEIIGRSEAMYSVL
                     KQVEMVAQSDSTVLILGETGTGKELIARAIHNLSGRNNRRMVKMNCAAMPAGLLESDL
                     FGHERGAFTGASAQRIGRFELADKSSLFLDEVGDMPLELQPKLLRVLQEQEFERLGSN
                     KIIQTDVRLIAATNRDLKKMVADREFRSDLYYRLNVFPIHLPPLRERPEDIPLLAKAF
                     TFKIARRLGRNIDSIPAETLRTLSNMEWPGNVRELENVIERAVLLTRGNVLQLSLPDI
                     ALPEPETPPAATVVAQEGEDEYQLIVRVLKETNGVVAGPKGAAQRLGLKRTTLLSRMK
                     RLGIDKSALI"
     gene            complement(50659..51012)
                     /locus_tag="JN001_000053"
     CDS             complement(50659..51012)
                     /locus_tag="JN001_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrous oxide-stimulated promoter family
                     protein"
                     /protein_id="HAY9051408.1"
                     /translation="MSGKRISREKLTIKKMIDLYQAKCPQASAEPEHYEALFVYAQKR
                     LDKCVFGEEKPACKQCPVHCYQPAKREEMKQIMRWAGPRMLWRHPILTVRHLIDDKRP
                     VPELPEKYRPKKPRE"
     gene            complement(51089..51223)
                     /locus_tag="JN001_000054"
     CDS             complement(51089..51223)
                     /locus_tag="JN001_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051409.1"
                     /translation="MIPELIISGEEANGEFLMLVPGKMLFCSFCVMLMKQVRKIASVE
                     "
     gene            51299..53860
                     /gene="mutS"
                     /locus_tag="JN001_000055"
     CDS             51299..53860
                     /gene="mutS"
                     /locus_tag="JN001_000055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HAY9051410.1"
                     /translation="MSAIENFDAHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYDDA
                     KRASQLLDISLTKRGASAGEPIPMAGIPYHAVENYLAKLVNQGESVAICEQIGDPATS
                     KGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDSKGFGYATLDISSGRFRLSEP
                     ADRETMAAELQRTNPAELLYAEDFAEMSLIEGRRGLRRRPLWEFEIDTARQQLNLQFG
                     TRDLVGFGVENAPRGLCAAGCLLQYAKDTQRTTLPHIRSITMEREQDSIIMDAATRRN
                     LEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTIGALQDF
                     TAGLQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLETVDSAPVQA
                     LREKMGEFAELRDLLERAIIDTPPVLVRDGGVIASGYNEELDEWRALADGATDYLERL
                     EVRERERTGLDTLKVGFNAVHGYYIQISRGQSHLAPINYMRRQTLKNAERYIIPELKE
                     YEDKVLTSKGKALALEKQLYEELFDLLLPHLEALQQSASALAELDVLVNLAERAYTLN
                     YTCPTFIDKPGIRITEGRHPVVEQVLNEPFIANPLNLSPQRRMLIITGPNMGGKSTYM
                     RQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILH
                     NATEYSLVLMDEIGRGTSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKME
                     DVANVHLDALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
                     ISPNAAATQVDGTQMSLLSVPEETSPAVEALENLDPDSLTPRQALEWIYRLKSLV"
     gene            53966..54622
                     /gene="pphB"
                     /locus_tag="JN001_000056"
     CDS             53966..54622
                     /gene="pphB"
                     /locus_tag="JN001_000056"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY9051411.1"
                     /translation="MPSTRYQKINAHHYRHIWVVGDIHGEYQLLQSRLHQLSFCPETD
                     LLISVGDNIDRGPESLDVLRLLNQPWFISVKGNHEAMELDAFATGDGNMWLASGGDWF
                     FDLNDSEQQEAIDLLLKFHHLPHIIEITNDIIKYVIAHADYPGDEYLFGKEIAESELL
                     WPVYRVQKSLNGELQQINGADYFIFGHMMFDNIQTFANQIYIDTGSPKSGRLSFYKIR
                     "
     gene            complement(54673..55470)
                     /locus_tag="JN001_000057"
     CDS             complement(54673..55470)
                     /locus_tag="JN001_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY9051412.1"
                     /translation="MSAGQRKEQKLIPVERRQIILEMVAEKGIVSIAELTDRMNVSHM
                     TIRRDLQKLEQQGAVVLVSGGVQSPGRVAHEPSHQVKTALAMTQKAAIGKLAASLVQP
                     GSCIYLDAGTTTLAIAQHLIHMESLTVVTNDFVIANYLLDNSNCTIIHTGGAVCRENR
                     SCVGEAAATMLRSLMIDQAFISASSWSVRGISTPAEDKVTVKRAIASASRQRVLVCDA
                     TKYGQVATWLALPLSEFDQIITDDGLPESASRALAKQDLSLLVAKNE"
     gene            55636..56544
                     /locus_tag="JN001_000058"
     CDS             55636..56544
                     /locus_tag="JN001_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY9051413.1"
                     /translation="MKTGSEFHVGIVGLGSMGMGAALSCVRAGLSTWGADLNSNACAT
                     LKEAGACGVSDNAATFAEKLDALLVLVVNAAQVKQVLFGETGVAQHLKPGTAVMVSST
                     IASADAQEIATALAGFDLEMLDAPVSGDAVKAANGEMTVMASGSDIAFERLAPVLEAV
                     AGKVYRIGAEPGLGSTVKIIHQLLAGVHIAAGAEAMALAARAGIPLDVMYDVVTNAAG
                     NSWMFENRMRHVVDGDYTPHSAVDIFVKDLGLVADTAKALHFPLPLASTALNMFTSAS
                     NAGYGKEDDSAVIKIFSGITLPGAKS"
     gene            56541..57802
                     /locus_tag="JN001_000059"
                     /pseudo
     CDS             56541..57802
                     /locus_tag="JN001_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649192.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
     gene            57799..58436
                     /locus_tag="JN001_000060"
                     /pseudo
     CDS             57799..58436
                     /locus_tag="JN001_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417218.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
     gene            58441..59217
                     /locus_tag="JN001_000061"
     CDS             58441..59217
                     /locus_tag="JN001_000061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HAY9051414.1"
                     /translation="MPRFAANLSMMFTEVPFIERFAAARKAGFDAMEFLFPYDYSTLQ
                     IQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQV
                     HVMAGVVPAGEDAERYRAVFIDNLRYAADRFVPHGKRILVEALSPDVKPHYLFSSQYQ
                     ALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGE
                     INYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGWFDAWR"
     gene            59306..60670
                     /locus_tag="JN001_000062"
     CDS             59306..60670
                     /locus_tag="JN001_000062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntP family transporter"
                     /protein_id="HAY9051415.1"
                     /translation="MSTITLLCIALAGVIMLLLLVIKAKVQPFVALLLVSLLVALAAG
                     IPAGEVGKVMIAGMGGVLGSVTIIIGLGAMLGRMIEHSGGAESLANYFSRKLGDKRTI
                     AALTLAAFFLGIPVFFDVSFIILAPIIYGFAKVAKISPLKFGLPVAGIMLTVHVAVPP
                     HPGPVATAGLLHADIGWLTIIGIAISIPVGIVGYFAAKIINKRQYAMSVEVLEQMQLA
                     PASEEGATKLSDKINPPGVALVTSLIVIPIAIIMTGTVSATLMPPSHPLLGTLQLIGS
                     PMVALMIALVLAFWLLALRRGWSLQHTSDIMGSALPTAAVVILVTGAGGVFGKVLVES
                     GVGKALANMLQMIDLPLLPAAFIISLALRASQGSATVAILTTGGLLSEAVMGLNPIQC
                     VLVTLAACFGGLGASHINDSGFWIVTKYLGLSVADGLKTWTVLTTILGFTGFLITWCV
                     WAVI"
     gene            complement(60764..61756)
                     /gene="rpoS"
                     /locus_tag="JN001_000063"
     CDS             complement(60764..61756)
                     /gene="rpoS"
                     /locus_tag="JN001_000063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoS"
                     /protein_id="HAY9051416.1"
                     /translation="MSQNTLKVHDLNEDAEFDENGVEVFDEKALVEEEPSDNDLAEEE
                     LLSQGVTQRVLDATQLYLGEIGYSPLLTAEEEVYFARRALRGDVASRRRMIESNLRLV
                     VKIARRYGNRGLALLDLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMN
                     QTRTIRLPIHIVKELNVYLRTARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNER
                     ITSVDTPLGGDSEKALLDILADEKENGPEDTTQDDDMKQSIVKWLFELNAKQREVLAR
                     RFGLLGYEAATLEDVGREIGLTRERVRQIQVEGLRRLREILQTQGLNIEALFRE"
     gene            complement(61819..62910)
                     /gene="nlpD"
                     /locus_tag="JN001_000064"
     CDS             complement(61819..62910)
                     /gene="nlpD"
                     /locus_tag="JN001_000064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator NlpD"
                     /protein_id="HAY9051417.1"
                     /translation="MSAGSPKFTVRRIAALSLVSLWLAGCSDTSNPPAPVSSVNGNAP
                     ANTNSGMLITPPPKMGTTSTAQQPQIQPVQPVAQQPVQMENGRIVYNRQYGNIPKGSY
                     SGSTYTVKKGDTLFYIAWITGNDFRDLAQRNNIQAPYALNVGQTLQVGNASGTPITGG
                     NAITQADAAEQGVVIKTAQNSTVAVASQPTITYSESSGEQSANKMLPNNKPAATTVTA
                     PVTVPTASTTEPTVSSTSTSTPISTWRWPTEGKVIETFGASEGGNKGIDIAGSKGQAI
                     IATADGRVVYAGNALRGYGNLIIIKHNDDYLSAYAHNDTMLVREQQEVKAGQKIATMG
                     STGTSSTRLHFEIRYKGKSVNPLRYLPQR"
     gene            complement(63050..63676)
                     /gene="pcm"
                     /locus_tag="JN001_000065"
     CDS             complement(63050..63676)
                     /gene="pcm"
                     /locus_tag="JN001_000065"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate O-methyltransferase"
                     /protein_id="HAY9051418.1"
                     /translation="MVSRRVQALLDQLRAQGIQDEQVLNALAAVPREKFVDEAFEQKA
                     WDNIALPIGQGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQHVCS
                     VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPTALMT
                     QLDEGGILVLPVGEEHQYLKRVRRRGGEFIIDTVEAVRFVPLVKGELA"
     gene            complement(63670..64431)
                     /gene="surE"
                     /locus_tag="JN001_000066"
     CDS             complement(63670..64431)
                     /gene="surE"
                     /locus_tag="JN001_000066"
                     /EC_number="3.1.3.5"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HAY9051419.1"
                     /translation="MRILLSNDDGVHAPGIQTLAKALREFADVQVVAPDRNRSGASNS
                     LTLESSLRTFTFENGDIAVQMGTPTDCVYLGVNALMRPRPDIVVSGINAGPNLGDDVI
                     YSGTVAAAMEGRHLGFPALAVSLDGHKHYDTAAAVTCSILRALCKEPLRTGRILNINV
                     PDLPLDQIKGIRVTRCGTRHPADQVIPQQDPRGNTLYWIGPPGGKCDAGPGTDFAAVD
                     EGYVSITPLHVDLTAHSAQDVVSDWLNSVGVGTQW"
     gene            complement(64412..65461)
                     /gene="truD"
                     /locus_tag="JN001_000067"
     CDS             complement(64412..65461)
                     /gene="truD"
                     /locus_tag="JN001_000067"
                     /EC_number="5.4.99.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(13) synthase TruD"
                     /protein_id="HAY9051420.1"
                     /translation="MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHI
                     LVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLS
                     AFQLEGCQVLEYARHKRKLRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYF
                     GAQRFGIGGSNLQGALRWAQTNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQ
                     VVDGDALQLAGRGSWFVATTEELAELQHRVNDKELMITAALPGSGEWGTQRKALAFEQ
                     AAVAAETELQALLVREKVEAARRAMLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVV
                     RELINTTGDYAHIAE"
     gene            complement(65458..65937)
                     /gene="ispF"
                     /locus_tag="JN001_000068"
     CDS             complement(65458..65937)
                     /gene="ispF"
                     /locus_tag="JN001_000068"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HAY9051421.1"
                     /translation="MRIGHGFDVHAFGGEGPIIIGGVRIPYEKGLLAHSDGDVALHAL
                     TDALLGAAALGDIGKLFPDTDPAFKGADSRELLREAWRRIQAKGYTLGNVDVTIIAQA
                     PKMLPHIPQMRVFIAEDLGCHMDDVNVKATTTEKLGFTGRGEGIACEAVALLIKATK"
     gene            complement(65937..66647)
                     /gene="ispD"
                     /locus_tag="JN001_000069"
     CDS             complement(65937..66647)
                     /gene="ispD"
                     /locus_tag="JN001_000069"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HAY9051422.1"
                     /translation="MATTHLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHA
                     LLAHPRVKRVVIAISPGDSRFAQLPLANHPQITVVDGGDERADSVLAGLKAAGDAQWV
                     LVHDAARPCLHQDDLARLLALSETSRTGGILAAPVRDTMKRAEPGKNAIAHTVDRNGL
                     WHALTPQFFPRELLHDCLTRALNEGATITDEASALEYCGFHPQLVEGRADNIKVTRPE
                     DLALAEFYLTRTIHQENT"
     gene            complement(66666..66977)
                     /gene="ftsB"
                     /locus_tag="JN001_000070"
     CDS             complement(66666..66977)
                     /gene="ftsB"
                     /locus_tag="JN001_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsB"
                     /protein_id="HAY9051423.1"
                     /translation="MGKLTLLLLAILVWLQYSLWFGKNGIHDYTRVNDDVAAQQATNA
                     KLKARNDQLFAEIDDLNGGQEALEERARNELSMTRPGETFYRLVPDASKRAQSAGQNN
                     R"
     gene            complement(67171..67494)
                     /locus_tag="JN001_000071"
     CDS             complement(67171..67494)
                     /locus_tag="JN001_000071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3561 family protein"
                     /protein_id="HAY9051424.1"
                     /translation="MRNSHNITLTNNDSLTEDEETTWSLPGAVVGFISWLFALAMPML
                     IYGSNTLFFFIYTWPFFLALMPVAVVVGIALHSLMDGKLRYSIVFTLVTVGIMFGALF
                     MWLLG"
     gene            complement(67544..68149)
                     /gene="cysC"
                     /locus_tag="JN001_000072"
     CDS             complement(67544..68149)
                     /gene="cysC"
                     /locus_tag="JN001_000072"
                     /EC_number="2.7.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylyl-sulfate kinase"
                     /protein_id="HAY9051425.1"
                     /translation="MALHDENVVWHSHPVTVQQRELHHGHRGVVLWFTGLSGSGKSTV
                     AGALEEALHKLGVSTYLLDGDNVRHGLCSDLGFSDADRKENIRRVGEVANLMVEAGLV
                     VLTAFISPHRAERQMVRERVGEGRFIEVFVDTPLAICEARDPKGLYKKARAGELRNFT
                     GIDSVYEAPESAEIHLNGEQLVTNLVQQLLDLLRQNDIIRS"
     gene            complement(68149..69576)
                     /gene="cysN"
                     /locus_tag="JN001_000073"
     CDS             complement(68149..69576)
                     /gene="cysN"
                     /locus_tag="JN001_000073"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysN"
                     /protein_id="HAY9051426.1"
                     /translation="MNTALAQQIANEGGVEAWMIAQQHKSLLRFLTCGSVDDGKSTLI
                     GRLLHDTRQIYEDQLSSLHNDSKRHGTQGEKLDLALLVDGLQAEREQGITIDVAYRYF
                     STEKRKFIIADTPGHEQYTRNMATGASTCELAILLIDARKGVLDQTRRHSFISTLLGI
                     KHLVVAINKMDLVDYSEETFTHIREDYLTFAGQLPGNLDIRFVPLSALEGDNVASQSE
                     SMSWYSGPTLLEVLETVEIQRVVDAQPMRFPVQYVNRPNLDFRGYAGTLASGRVEVGQ
                     RVKALPSGVESNVARIVTFDGDREEAFAGEAITLVLTDEIDISRGDLLLAADEALPAV
                     PSASVDVVWMAEQPLSPGQSYDIKIAGKKTRARVDGIRYPVDINNLTQREVENLPLNG
                     IGLVDLTFDEPLVLDRYQQNPVTGGLIFIDRLSNVTVGAGMVHEPKNEAAVASSEFSA
                     FELELNALVRRHFPHWGARDLLGDK"
     gene            complement(69578..70486)
                     /gene="cysD"
                     /locus_tag="JN001_000074"
     CDS             complement(69578..70486)
                     /gene="cysD"
                     /locus_tag="JN001_000074"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HAY9051427.1"
                     /translation="MAQKRLTHLRQLEAESIHIIREVAAEFSNPVMLYSIGKDSSVML
                     HLARKAFYPGTLPFPLLHVDTGWKFREMYEFRDRTAKAYGCELLVHKNPEGVAMGINP
                     FVHGSAKHTDIMKTEGLKQALNKYGFDAAFGGARRDEEKSRAKERIYSFRDRFHRWDP
                     KNQRPELWHNYNGQINKGESIRVFPLSNWTEQDIWQYIWLENIDIVPLYLAAERPVLE
                     RDGMLMMIDDNRIDLQPGEVIKKRMVRFRTLGCWPLTGAVESNAQTLPEIIEEMLVST
                     TSERQGRVIDRDQAGSMELKKRQGYF"
     gene            70738..71775
                     /gene="iap"
                     /locus_tag="JN001_000075"
     CDS             70738..71775
                     /gene="iap"
                     /locus_tag="JN001_000075"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase isozyme conversion
                     aminopeptidase"
                     /protein_id="HAY9051428.1"
                     /translation="MFSALRHRTAALALGVCFILPVHASSPKPGDFANTQARHIATFF
                     PGRMTGTPAEMLSADYIRQQFQQMGYRSDIRTFNSRYIYTARDNRKSWHNVTGSTVIA
                     AHEGKAPQQIIIMAHLDTYAPLSDADADANLGGLTLQGMDDNAAGLGVMLELAERLKN
                     TPTEYGIRFVATSGEEEGKLGAENLLKRMSDTEKKNTLLVINLDNLIVGDKLYFNSGV
                     KTPEAVRKLTRDRALAIARSHGIAATTNPGLNKNYPKGTGCCNDAEIFDKAGIAVLSV
                     EATNWNLGNKDGYQQRAKTAAFPAGNSWHDVRLDNQQHIDKALPGRIERRCRDVMRIM
                     LPLVKELAKAS"
     gene            complement(71982..72275)
                     /gene="cas2"
                     /locus_tag="JN001_000076"
     CDS             complement(71982..72275)
                     /gene="cas2"
                     /locus_tag="JN001_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endoribonuclease
                     Cas2"
                     /protein_id="HAY9051429.1"
                     /translation="MSMVVVVTENVPPRLRGRLAIWLLEVRAGVYVGDTSKRIREMIW
                     QQITQLAGCGNVVMAWATNTESGFEFQTWGENRRIPVDLDGLRLVSFLPVDNQ"
     gene            complement(72275..73195)
                     /gene="cas1e"
                     /locus_tag="JN001_000077"
     CDS             complement(72275..73195)
                     /gene="cas1e"
                     /locus_tag="JN001_000077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated endonuclease Cas1"
                     /protein_id="HAY9051430.1"
                     /translation="MTFVPLSPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHI
                     PVGSVACIMLEPGTRVSHAAVHLAATVGTLQVWVGEAGVRVYSSGQPGGARADKLLYQ
                     AKLALTEDLRMKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRQTYALLAKQYGVKW
                     NGRKYDPKDWEKGDVVNRCISAATSCLYGISEAAVLAAGYAPAIGFIHSGKPLSFVYD
                     IADIIKFDSVVPKAFEIAARQPAEPDKEVRLACRDIFRSTKLTGKLIPLIEEVLAAGE
                     IEPPQPAPDMLPPAIPEPETLGDSGHRGRG"
     gene            complement(73192..73842)
                     /gene="cas6e"
                     /locus_tag="JN001_000078"
     CDS             complement(73192..73842)
                     /gene="cas6e"
                     /locus_tag="JN001_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas6/Cse3/CasE"
                     /protein_id="HAY9051431.1"
                     /translation="MYLSRITLHTGQLSPAQLLHLVDRGEYVMHQWLWDLFPSGKERQ
                     FLYRREELQGAFRFFVLSQERPAESDTFTIECRSFAPELCTGQQLCFNLRANPTICKA
                     GKRHDLLMEAKRQVRGQAEGSDVWLHQQQAALDWLAAQGERSGFTLLDISVDAYRQQQ
                     LRRENSQQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGCGLMLIKPGAEA"
     gene            complement(73824..74570)
                     /gene="cas5e"
                     /locus_tag="JN001_000079"
     CDS             complement(73824..74570)
                     /gene="cas5e"
                     /locus_tag="JN001_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cas5/CasD"
                     /protein_id="HAY9051432.1"
                     /translation="MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSLSALLGLLAAGV
                     GIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPE
                     LLSAIISRRDYYTDAWWMVAVATTADAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPL
                     APLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDV
                     PLNRQQWLFGERTVNQGPWLSKEEPCTSQE"
     gene            complement(74581..75659)
                     /gene="cas7e"
                     /locus_tag="JN001_000080"
                     /pseudo
     CDS             complement(74581..75659)
                     /gene="cas7e"
                     /locus_tag="JN001_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311639.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein
                     Cas7/Cse4/CasC"
     gene            complement(75687..76256)
                     /gene="casB"
                     /locus_tag="JN001_000081"
     CDS             complement(75687..76256)
                     /gene="casB"
                     /locus_tag="JN001_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005008196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse2/CasB"
                     /protein_id="HAY9051433.1"
                     /translation="MSIVKDEHKVALRKWHEELQDKRGERASLRRSTTVNDVCLTDGF
                     RLFLKNRQIKWQDEPEWRITALALIAAVSANVKAIDERQPFAAQLAAVMKKGRFTRLL
                     AVKTPDDLLRQLRRAVKLLNGSVNLDSLEEGVFRWCQESDDLLNHHRRQQRPTEFIRI
                     RWALGAGRWALGAGRWALGAGILPGWRRR"
     gene            complement(76253..77815)
                     /gene="casA"
                     /locus_tag="JN001_000082"
     CDS             complement(76253..77815)
                     /gene="casA"
                     /locus_tag="JN001_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I-E CRISPR-associated protein Cse1/CasA"
                     /protein_id="HAY9051434.1"
                     /translation="MNSFSLLTTPWLPVRFKDGTTGKLAPVDLADENVVDIAAPRADL
                     QGAAWQFLLGLLQTSFAPKDQRSWDDIWEDGLEAEKLREALLSLEHAFQFGPDSPSFM
                     QDFDELKVKATFIASLLPDAPGKQTKERNTDHFIKRDTTQHLCLHCVPLALFSIQLNA
                     PIGGRGYYPGLRGGGPLTTLIELLEYQGNQQTPLWRKLWLNVMPQDEADLPLPKTFDD
                     LVFPWLAPTRTSELDGAVVTDEQVNKLQAYWGMPRRIRIDFKTTSIGNCDICGRQSDA
                     LLGLMSLKNYGVQYVMWRHPLTPYRLPLKEGGDFYSVKPQPGGLIWRDWLGLIEVGNS
                     KNNTELPAQVVKLLNASNLKQTRVGLWGFGFDFEDMKVRCWYEHHFPLLLNKKEDLIP
                     KLRLAAQAASHILSLLHRALKEAWFSEKKTTKLDFGFVDIDFWNKTQHRFLRLVRKIE
                     EGQDPDELLSKWQKEMWLFARQDFDDRVFTNPYEPVDLERVMTARKKYFTTSAEKQNA
                     NAAREKKQEAAE"
     gene            complement(77913..79467)
                     /gene="cas3"
                     /locus_tag="JN001_000083"
                     /pseudo
     CDS             complement(77913..79467)
                     /gene="cas3"
                     /locus_tag="JN001_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142534.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="CRISPR-associated helicase Cas3'"
BASE COUNT        18741 a        21563 c        20297 g        18866 t
ORIGIN      
        1 gctcctctta tgtgatgggg aaagcggttg aaacagaaga tgaagactgg aatttctgag
       61 ggtgttattt tcaaaaatat cactacccgc agcagggaaa taattcccgc caaatagctt
      121 tttatcacgc aaatattctg tagtgatcta cactgagact ctgttgcatt attcgcctga
      181 aactacaata ttcaggcgtt ttttcgctat ctatgacaaa aaatatcaac ttttctcgat
      241 ttgctctcag cccttatatc acgggaaatt ccggcgattt gctcgcatca atattcatgc
      301 cacatttgcc ctcaggggtt gcctcagatt ctcagtatgt tagggtagaa aaaagtgact
      361 atttccattg ggtaatatat cgacataaac aaataaagga atctttctat tgcatggcaa
      421 ttaaattaga aattaaaaat ctttataaaa tatttggcga gcatccacag cgagcgttca
      481 aatatatcga acaaggactt tcgaaagaac aaattctgga aaaaactggg ctatcgcttg
      541 gcgtaaaaga cgccagtctg gccattgaag aaggcgagat atttgtcatc atgggattat
      601 ccggctcggg taaatccaca atggtacgcc ttctcaatcg cctgattgaa cccacccgcg
      661 ggcaagtgct gattgatggt gtggatattg ccaaaatatc cgatgccgaa ctccgtgagg
      721 tgcgcagaaa aaagattgcg atggtcttcc agtcctttgc cttaatgccg catatgaccg
      781 tgctggacaa tactgcgttc ggtatggaat tggccggaat taatgccgaa gaacgccggg
      841 aaaaagccct tgatgcactg cgtcaggtcg ggctggaaaa ttatgcccac agctacccgg
      901 atgaactctc tggcgggatg cgtcaacgtg tgggattagc ccgcgcgtta gcgattaatc
      961 cggatatatt attaatggac gaagccttct cggcgctcga tccattaatt cgcaccgaga
     1021 tgcaggatga gctggtaaaa ttacaggcga aacatcagcg caccattgtc tttatttccc
     1081 acgatctcga tgaagctatg cgtattggcg accgaattgc cattatgcaa aatggtgaag
     1141 tggtacaggt cggcacaccg gatgaaattc tcaataatcc ggcgaatgat tatgtccgta
     1201 ccttcttccg tggcgttgat attagtcagg tattcagtgc gaaagatatt gcccgccgga
     1261 caccgaatgg cttaattcgt aaaacccctg gcttcggccc acgttcggca ctgaaattat
     1321 tgcaggatga agatcgcgaa tatggctacg ttatcgaacg cggtaataag tttgtcggcg
     1381 cagtttccat cgattcgctt aaaaccgcgt taacgcagca gcaaggtctt gatgcggcgc
     1441 tgattgatgc gccgttagca gtcgatgcac aaacgcctct tagcgagttg ctctctcatg
     1501 tcggacaggc accctgtgcg gtacccgtgg tcgacgagga ccaacagtat gtcggcatca
     1561 tttcgaaagg aatgctgctg cgcgctttag atcgtgaggg ggtaaataat ggctgatcaa
     1621 aataatccgt gggataccac gccagcggcg gacagtgccg tgcaatccgc agacgcctgg
     1681 ggtacaccgg cgactgcacc gactgacggc ggtggtgctg actggctgac cagtacgcct
     1741 gcgccaaacg tcgagcattt taatattctc gatccgttcc ataaaacgct gatcccgctc
     1801 gacagttggg tcactgaagg gatcgactgg gttgttaccc atttccgtcc cgtcttccag
     1861 ggcgtgcgcg ttccggttga ttatatcctc aacggtttcc agcaattgct gctgggtatg
     1921 cccgcaccgg tggcgattat cgttttcgct ctcatcgcct ggcagatttc cggggtcgga
     1981 atgggcgtgg cgacgctggt ttcgctgatt gccatcggcg caatcggtgc ctggtcgcag
     2041 gccatggtta ccctggcgct ggtgttaacc gccctgctgt tctgtatcgt cattggtttg
     2101 ccgctgggga tctggctggc gagaagtccg cgagcggcga aaattattcg tccactgctt
     2161 gatgccatgc agaccacgcc agcgtttgtt tatctggtgc caatcgtcat gctatttggt
     2221 atcggtaacg tgccgggcgt ggtggtgacg atcatctttg ctctgccgcc gattatccgt
     2281 ctgaccattc tggggattaa ccaggttccg gcggatctga ttgaagcctc gcgctcattc
     2341 ggtgccagcc cgcgccagat gctgttcaaa gttcagttac cgctggcgat gccgagcatt
     2401 atggcgggcg ttaaccagac gctgatgctg gccctttcta tggtggtcat tgcctcgatg
     2461 attgccgtcg gcgggctggg tcagatggta cttcgcggta tcggtcgtct ggatatgggg
     2521 cttgccaccg ttggcggcgt cgggattgtg atcctcgcca ttatcctcga tcgcctgacg
     2581 caggccgttg ggcgcgactc acgcagtcgc ggcaaccgtc gctggtacac cactggccct
     2641 gttggtctgc tgacccgccc attcattaag taactctgca cttgcccggt gacgccgggc
     2701 attatcaccc tgccaaaaaa aggaataaca atgcgacata gcgtactttt tgcgacagcg
     2761 tttgccacgc ttatctctac acaaactttt gctgccgatc tgccgggcaa aggtattact
     2821 gttaatccag ttcaaagcac catcaccgaa gaaaccttcc agacgctgct ggtcagccgt
     2881 gcgctggaga aattaggcta taccgtcaac aaacccagcg aagtagatta caacgttggc
     2941 tacaccttgc ttgcttccgg cgatgcaacc ttcaccgccg tgaactggac gccactgcat
     3001 gacaacatgt acgaagctgc cggtggcgat aagaaatttt atcgtgaagg ggtatttgtt
     3061 aacggcgcgg cacagggtta cctgatcgat aagaaaaccg ccgaccagta caaaatcacc
     3121 aacatcgcac aactgaaaga gccgaagatc gccaaactgt tcgataccaa cggcgacggt
     3181 aaagcggatt taaccggttg taatcctggc tggggctgcg aaggtgcgat caaccaccag
     3241 cttgccgcgt atgaactgac caacaccgtg acgcataatc aggggaacta cgcagcgatg
     3301 atggccgaca ccatcagtcg ctacaaagag ggcaaaccgg tgttttatta cacctggacg
     3361 ccgtactggg tgagtaatga gctgaagcca gggaaagatg tggtctggtt gcaggtgccg
     3421 ttctccgcac tgccgggcga taaaaatgcc gataccaaac tgccgaatgg cgcgaattac
     3481 ggcttcccgg tcagcaccat gcatatcgtt gccaacaaag cctggaccga gaaaaatccg
     3541 gcggcagcca aactgtttgc cattatgcag ttgccagtgg ccgatattaa cgcccagaac
     3601 gccattatgc atgacggcaa agcctcagaa ggcgatattc agggccacgt tgatggctgg
     3661 atcaaagccc accagcagca gttcgatggc tgggtgaatg aggcgctggc agcgcagaag
     3721 taatttttat tcaggcggat aaggcgtttt tgccttatcc gccgctctgt acacaatgcc
     3781 tgatgcgacg ctgacgcgtc ttatcatgcc tacaaaatac actcattccg tatggcggat
     3841 aaggcgtttt cgccgcatcc gccgttctgt gcacaatgcc tgatgcgacg ctggcgcgtc
     3901 ttatcatgcc tacaaaccac atcgcacatt tcaacaagct atctttcatc ccatattcat
     3961 caacatccgc tattattgat ttccagctta atcatcacct gatgaacaaa aataatgact
     4021 aaacctaatc atgagcttag cccggcgctg atcgtgctga tgtctatcgc caccggtctg
     4081 gcggtagcca gtaactatta cgcccagcca ttgctcgaca ccatcgcgcg taacttttcc
     4141 ctttccgcca gttcggcagg ctttattgtt accgccgcgc aattgggcta tgcagcaggt
     4201 ctgctgtttc ttgttcccct cggtgatatg tttgaacgcc gccgcctgat tgtctcgatg
     4261 accttactgg cggcaggcgg catgttaatc actgccagca gtcagtcgct ggcgatgatg
     4321 atcctcggta cggcattaac cggtttattc tctgtcgtgg cacaaattct ggttccgctg
     4381 gcagcgacgc tggcttcacc ggacaaacgc ggcaaagtgg ttggcactat tatgagcggt
     4441 ctgctgttgg ggatcttact cgcacggacc gttgccggat tgctggcgaa tctcggcggc
     4501 tggcgcaccg tcttttgggt tgcctcggtg ttaatggcac tgatggcgct ggcattatgg
     4561 cgtggtctgc cacaaatgaa atcagaaacc cacctcaact acccacagtt gttaggttcc
     4621 gttttcagca tgtttatcag cgataagatc ctgcgcaccc gcgcattgct gggctgcctg
     4681 acctttgcca acttcagcat tctctggacc tcaatggcct ttttgcttgc cgctccacct
     4741 tttaactaca gcgatggtgt cattggtctg tttggacttg cgggagctgc cggagcgttg
     4801 ggcgctcgtc cggcgggcgg ttttgccgat aagggtaaat cgcaccacac cacaactttc
     4861 ggtctgctgc tgctattact ttcatggctg gcgatctggt ttggtcacac ttccgtactg
     4921 gcgctgatta tcggcatcct ggtgctggat ctcaccgtac agggcgtgca tatcactaac
     4981 cagacggtaa tttatcgaat acaccctgat gcgcgtaatc gcctgaccgc aggttacatg
     5041 accagctact ttattggcgg tgccgccggt tcgctaattt cagcctcagc ctggcaacat
     5101 ggcggttggg ctggcgtttg tctggctggc gcgacgattg ccctggttaa cttactggtc
     5161 tggtggcgag gttttcatcg tcaggaagcc gcaaattaag caatcagcaa ccgttttcgt
     5221 ggctttacac ttataagggt gttaagaagc ccatcagtct gataaggtta agatattcat
     5281 tcagtctatt tataatatta acaatcgtta agcgtacact ctatggaaag ccctactcca
     5341 cagcctgctc ttggttcggc gaccttcatg gaaggatgca aagacagttt accgattgtt
     5401 attagttata ttccggtggc ctttgcgttc ggtctgaatg cgacccgtct gggattctct
     5461 cctctcgaaa gcgttttttt ctcctgcatc atttatgcag gcgcgagcca gttcgtcatt
     5521 accgcgatgc tggcagccgg gagtagtttg tgggttgctg cactgaccgt catggcaatg
     5581 gatgttcgcc atgtgttgta tggcccgtca ctgcgtagcc gtattattca gcgtctgcaa
     5641 aaatcgaaaa ccgccctgtg ggcatttggc ctgacggatg aggtttttgc cgccgcaacc
     5701 gcaaaactgg tacgcaataa tcgccgctgg agcgagaact ggatgatcgg cattgccttc
     5761 agttcatggt catcgtgggt atttggtacg gtaatagggg cattctccgg cagcggcttg
     5821 ctgcaaggtt atcccgccgt tgaagctgca ttaggtttta tgcttccggc actctttatg
     5881 agtttcctgc tcgcctcttt ccagcgcaaa caatctcttt gcgttaccgc agcgttagtt
     5941 ggtgcccttg caggcgtaac gctattttct attcccgtcg ccattctggc aggcattgtc
     6001 tgtggctgcc tcactgcgtt aatccaggca ttctggcaag gagcgcccga tgagctatga
     6061 ggttctgctg cttgggttac tggttggcgt ggcgaattat tgcttccgct atttgccgct
     6121 gcgcctgcgt gtgggtaatg cccgcccaac caaacgtggc gcggtaggta ttttgctcga
     6181 caccattggc atcgcctcga tatgcgctct gctggttgtc tctaccgcac cagaagtgat
     6241 gcacgataca cgccgtttcg tgcccacgct ggtcggcttc gcggtactgg gtgccagttt
     6301 ctataaaaca cgcagcatta tcatcccaac actgcttagt gcgctggcct atgggctcgc
     6361 ctggaaagtg atggcgatta tataacccac aagaatcatt tttctaaaac aatacattta
     6421 ctttatttgt tactgtcgtt actatatcgg ctgaaattaa tgaggtcata cccaaatgga
     6481 tagttcgttt acgcccattg aacaaatgct aaaatttcgc gccagccgcc acgaagattt
     6541 tccttatcag gagatccttc tgactcgtct ttgcatgcac atgcaaagca agctgctgga
     6601 gaaccgcaat aaaatgctga aggctcaggg gattaacgag acgttgttta tggcgttgat
     6661 tacgctggag tctcaggaaa accacagtat tcagccttct gaattaagtt gtgctcttgg
     6721 atcatcccgt accaacgcga cgcgtattgc cgatgaactg gaaaaacgcg gttggatcga
     6781 acgtcgtgaa agcgataacg atcgccgctg cctgcatctg caattaacgg aaaaaggtca
     6841 cgagtttttg cgcgaggttt taccaccgca gcataactgc ctgcatcaac tctggtccgc
     6901 gctcagcaca acagaaaaag atcagctcga gcaaatcacc cgcaaattgc tctcccgtct
     6961 cgaccagatg gaacaagacg gtgtggttct cgaagcgatg agctaacgcg tcatctcgct
     7021 caaaaatcca gatttataaa agaaaaaatg accggccagc atcgcaacat gctggccttt
     7081 ttggcaagca ggtcggctca gccgatgagt taagaagatc gtggagaaca atatgagcgc
     7141 aaatgcggag actcaaaccc cgcagcaacc ggtaaagaag agcggcaaac gtaagcgtct
     7201 gctcctcctt ctcaccttgc tctttataat tattgccgta gcgataggga tttattggtt
     7261 tttggtactg cgtcatttcg aagaaaccga tgacgcatac gtggcaggga atcagattca
     7321 aattatgtct caggtgtctg gcagcgtgac gaaagtctgg gccgataaca ccgattttgt
     7381 aaaagaaggc gatgttctgg tcactctcga cccgacagat gctcgccagg cgtttgaaaa
     7441 agccaaaact gcactggctt ccagcgttcg ccaaacccac cagctgatga ttaacagcaa
     7501 acagttacag gcgaatattg aggtgcaaaa aatcgccctc gcgaaagcac aaagcgacta
     7561 caaccgccgt gtgccgctgg gcaatgccaa cctgattggt cgcgaagagc tgcaacacgc
     7621 ccgcgacgcc gtcaccagtg cccaggcgca actggacgtc gctattcaac aatacaatgc
     7681 caatcaggcg atgattctgg ggactaaact ggaagatcag cctgccgtgc aacaggctgc
     7741 caccgaagta cgtaacgcct ggctggcgct ggagcgtacc cgtattgtca gtccgatgac
     7801 cggttatgtc tcccgccgcg cggtacagcc tggggcgcaa attagcccaa cgacgccgct
     7861 gatggcggtc gttccagcca ccaatatgtg ggtggatgcc aactttaaag agacgcagat
     7921 tgccaatatg cgtatcggtc agccggtcac tatcaccacg gatatttacg gcgatgatgt
     7981 gaaatacacc ggtaaagtgg ttggtctgga tatgggcaca ggtagcgcat tctcactgct
     8041 tccggcgcaa aatgcgaccg gtaactggat caaagtcgtt cagcgtctac ctgtgcgtat
     8101 cgaactggac cagaaacagc tggagcaata cccgctgcgc attggtttgt ccacgctggt
     8161 gagcgtcaat accactaacc gtgacggtca ggtactggca aataaagtac gttcaacacc
     8221 ggtcgcggta agtaccgcgc gtgaaatcag cctggcacct gtcaataaac tgatcgacga
     8281 tatcgtaaaa gctaacgctg gctaatccag aggtgcgtgt gatgcaacag caaaaaccgc
     8341 tggaaggcgc gcaactggtc attatgacga ttgcgctgtc actggcgaca ttcatgcagg
     8401 tgctggactc caccattgct aacgtggcga tccccactat cgccgggaat ctgggctcat
     8461 cgctcagcca gggaacgtgg gtaatcactt ctttcggggt ggcgaatgcc atctcgatcc
     8521 cgcttaccgg ctggctggca aagcgcgtcg gggaagtgaa actgttcctt tggtccacca
     8581 tcgcctttgc tattgcgtcg tgggagtgtg gtgtctccag cagcctgaat atgctgatct
     8641 tcttccgtgt gattcagggg attgtcgctg ggccgttgat cccactttcg caaagtcttt
     8701 tgctgaataa ttacccgcca gccaaacgct caatcgcgct ggcgttgtgg tcgatgacgg
     8761 tgattgtcgc gccaatttgc ggcccaatcc tcggcggtta tatcagcgat aattaccact
     8821 ggggctggat attcttcatc aacgtgccaa ttggcgtggc ggtggtgttg atgacactgc
     8881 aaaccctgcg cggacgcgaa acccgcaccg aacggcggcg gattgatgcc gtggggctgg
     8941 cactgctggt tattggtatc ggtagcctgc agattatgct cgaccgcggt aaagagctgg
     9001 actggttttc atcacaggaa attatcattc ttaccgtggt ggcggtggtg gctatctgct
     9061 tcctgattgt ctgggagctg accgacgata acccgatagt cgatctgtcg ttgtttaagt
     9121 cgcgcaactt caccatcggc tgcttgtgta tcagcctcgc gtatatgctc tacttcggcg
     9181 cgattgttct gctgccgcag ttgttgcagg aggtctacgg ttacacggcg acctgggcag
     9241 gtttggcctc tgcgccggta gggattattc cggtgatcct gtcgccgatt atcggccgct
     9301 tcgcgcataa actggatatg cggcggctgg taaccttcag ctttattatg tatgccgtct
     9361 gcttctactg gcgtgcctat acctttgaac caggtatgga ttttggcgcg tcggcctggc
     9421 cgcagtttat ccaggggttt gcggtggcct gcttctttat gccgctgacc accattacgc
     9481 tgtctggttt gccaccggaa cgactggcgg cggcatcgag cctctctaac tttacgcgaa
     9541 cgctggcggg gtctatcggc acgtcgataa ccacgaccat gtggaccaac cgcgagtcga
     9601 tgcaccatgc gcagttgact gagtcggtaa acccgttcaa cccgaatgcc caggcgatgt
     9661 acagtcaact ggaagggctt gggatgacgc aacagcaggc atcaggctgg attgcccagc
     9721 agatcactaa tcaggggctg attatttccg ccaatgagat cttctggatg tcagccggga
     9781 tattcctcgt cctgctgggg ctggtgtggt ttgctaaacc gccctttggc gcaggtggcg
     9841 gcggaggtgg tgcgcactaa gtacaactaa gccagttcat ttgaactggc ttttttcaat
     9901 taattgtgaa gatagtttac tgactaaatg tgcagttcct gcaacttctc tttcggcagt
     9961 gccagttctt cgttgctgtt gatgcgtacg tcacgttcca gaatgctacg cgcaatatcc
    10021 tgcgcttcct gcaacgagtg catctggtaa gtgccacact ggtagacgtt cagctccggg
    10081 atctgattct gatcctgcac tttcagcacg tcttccattg ccgctttcca ggcatcagca
    10141 acacgctgct catctggcgt accaatcaga ctcatataaa aaccggtgcg gcagcccatt
    10201 ggcgagatat cgataatctc tacaccatta ccgttaagat ggttacgcat aaaaccagca
    10261 aacaggtgct ccagagtatg gctccctctt tctggcatca cttctttgtt cggcacgcag
    10321 aagcgcagat cgaacacggt gattgcgtcg ccatgcgggg tgttcattgt tttcgccacc
    10381 cgaactgcag gcgcttccat ccgggtatga tcgactgtga agctatctaa caacggcatt
    10441 tagccacctc cggtaatttt tttaaaaatt ttctgaactc tttcttccca ggcgagtctg
    10501 agtatatgaa agacgcgcat ttgttatcat catccctgaa ttcagagatg aaattttggc
    10561 cactcacgag tggccttttt cttttctgtc aggcgtgttt ttccagccac accgcaaacg
    10621 gttcggtatc agcggtttcc atttcctgct gacggcgttc agatgcctcg cgctcggcta
    10681 caaaatcctc ttcgcgcaga atttccaacg gctcttcacg cagcagatta cggtaggctt
    10741 ctgcaaacgc tttgcctgtt ccgccaatac cagtatcaat catagacctt aagatacggg
    10801 cagagaaagt cagatcggga ttatcgaagc aggcgaccag ttcatcacac actttctgat
    10861 acgctttgcc gccgttaatg ctatccaacg tttgcgcgac gcgtttcaga tcgcggaaca
    10921 gatctttacc cacctgcggt aacgggaact gcgcggtttc gcagccgata cccagcgtca
    10981 ggcccggttt gcgaccttcg aggatcaccc ggttccagtt aacgcgtgta caggcaagtt
    11041 cgctactgct catttccggt gcatcagcca gcgcacacca gaccataaac aggtcgagga
    11101 atcgcacctg ctgttcatct acaccaatcg gcgagaacgg gttgatgtcc agcgaacgca
    11161 cttcaatata ttcaatgccg ccacgtaaca gcgcatcaga aggtgactcg ccgctgcggg
    11221 taacgcgttt tggacgaatc ggcgcataca gttcgttttc aatctgcagc acgttgctat
    11281 tgatttgcag cctcttaccg tctttctcaa taccaatctt cgcgtactct tccgatggcg
    11341 ttttgattgc ctgtttaagg cccgctacgt actcgtaaag atcgttgaag gtaataccaa
    11401 gattgctttg cgatttattg gtatagccga gatcgctcaa acgaagagag gtcgcatacg
    11461 gcaggtaata cataccgcac tcggttttct caaacggcag cgacgttggt tttccttgca
    11521 ggaaagaaga acaaatcgcc ggagatgcac caaacagata aggaatgacc caaccgaaac
    11581 gatagtaatt gcggataacg cggaaatagc ccgcagaaat tttctctttg gcatcagtgc
    11641 ccgagatatc acagcacttc gcttgccaga atgccattgg caaagagaaa ttgtagtgca
    11701 cgccggaaat ggtttgcatc agcgcgccgt agcgattttt cagcccttca cgatacagcg
    11761 ttttaaagcg tccggtgtta gaagtgccgt actgtgccag ttcgatgtcc tgaccttctg
    11821 cgatgtagca tggcatactt aacggccaca tccgctcatc gcccatattg cgcgccgtat
    11881 aacgatgcag atcgcgcata aaggtcaaca tatgttcaat atcaccatcc actggtgtaa
    11941 tgaattccag caatgcttcc gcaaaatcgg tagtaatcca tttgtgcgtc agtgcggaac
    12001 ctaatgcttc aggatgacct gttgttgcct gtgtgccatc agcattaaca cgcaaagttt
    12061 cgcgctccag cccacgctgt atccccttta acgcctgagg atgtttttcc agccaggcca
    12121 gcgcctgtga tacgtccggg atcaaattga cctcccgcct gtcaaaatcg ttttaattag
    12181 cataactgta atggtgacca tatgtgcagg cctacaatta gtgccaccac atcatgccct
    12241 gaacggtagc tgctgcaact gcaacatagc gtaaagcttt accaaggcac aaaaaaaaga
    12301 ttaccggtcc ccacgagatg cgcatccatc ccgctaacag acacagtaaa tcgccaacca
    12361 cgggcatcca gcttaataat agcgtgactg caccatagcg tttcagccag ccagtagctt
    12421 tctcttgcca gcgcgatgtt ttacgcaatg gaaagaaacg cccaaggata acgttagtta
    12481 accctccaag gctattaccc attgttgctg ttaaaactaa aacccaggga taactgatcc
    12541 cggaaagcaa cattgccacc agcacgactt cggagttgcc gggtaatagt gtagcgctga
    12601 gaaaactact ggcaaacaac gagaaaagcg ataacgcttc actcacagca agcgaacatc
    12661 cacggcgtcc atgcctgctg cacgggccgc ctgaataccg aaatcggcat cttcaaagac
    12721 cacacactgc gtcggttgca cgcccatacg ctgcgcgcac aacaaaaatg tgtctggcgc
    12781 gggtttatgg tgtttgacgt gatcagcagc gacgacggcg tcaaaataac ggcgtaatcc
    12841 caggtgcgcc agcaatgcct cagcgatggc gctttcactc cccgttccta cagccattgg
    12901 gcgacgacca tgccaacttt tcaccacttc aacaagagga agcggctcga cactatccag
    12961 cagcatactt cttactgctt ctgttttttc acgcgctaac gcatgcgggg cgagatcggc
    13021 ctgattcagc tcaataattg cctgagcaat acgccaggtg ggcgatccat taagcgcaat
    13081 cattgcctga acatcgtact gaagaccgta gtgccctaat acttcgcgcc acgctttacg
    13141 gtgcgtaggc tccgtatcca ggaatatcaa aaattaaacc tgcataacgc tcgtacatgg
    13201 tcttctcgca agtcgaaaaa tatgacgcta ctttagcgta attgcttgat tttgtcgctg
    13261 atggcgaagg agaagaaaat tcaggaaatg gataaagtag ttatttagaa atgagatatt
    13321 tttgaaggaa atttttggga gaagatggtg catccgggag gattcgaacc tccgaccgct
    13381 cggttcgtag ccgagtactc tatccagctg agctacggat gcatcgggaa aatttatttt
    13441 actgctgata ttgatatcgc tactaaagcc atatcaagta agagatggtg catccgggag
    13501 gattactcgc cttgcggctc gcccttcggg ccgttgctaa agcaacgtta tcatccctgg
    13561 tgcctgcggt taattccgct acctcttcga taccttcatt gctgaagatt tcggagaata
    13621 tggtgcatcc gggaggattc gaacctccga ccgctcggtt cgtagccgag tactctatcc
    13681 agctgagcta cggatgcatc gggaaactta ctttactgca gattttttga taccgctact
    13741 aaagccgtat caagtaagag atggtgcatt cgggaggatt actcgccttg cggctcgccc
    13801 ttctggccgt tgctaaagca acgttatcct ccctggtgcc tgcggttata ccgccacctc
    13861 ttccatacct tcatcgctga aagtacgtag aatatggtgc atccgggagg attcgaacct
    13921 ccgaccgctc ggttcgtagc cgagtactct atccagctga gctacggatg caaatggcgg
    13981 tgaggcgggg attcgaaccc cggatgcagc ttttgaccgc atactccctt agcaggggag
    14041 cgccttcagc ctctcggcca cctcaccaca cacctcttac gagtgcttcg aagaacttgt
    14101 ttatcgctca tcgtcgctgc gtggcgcaca tattactttc tgagacttat aagtcaaaca
    14161 atttttccca cacttttatc gtttgcacac ttcacgctca attagtctgt aaaaacgtca
    14221 aaaagagtgt tttatctaca gaaaaacgga ggtctggcag atagcagtaa tgcaaaaaaa
    14281 tggagactta agttgaatga acgggagtaa agcgaaaaga ctatagagtg aaggagaaat
    14341 tttgagggtg cgtctcaccg ataaagatga gacgcggaaa gattagtaac tggactgctg
    14401 ggatttttca gcctggatac gctggtagat ctcttcacgg tgaacagaaa cttccttcgg
    14461 ggcatttacg ccaatacgta cctggttgcc cttcacccct aaaactgtca cggtgacctc
    14521 atccccaatc atgagggtct caccaactcg acgagtcaga atcagcattc tttgctcctt
    14581 gaaagattaa aagagtcggg tctctctgta tcccggcatt atccatcata taacgccaaa
    14641 aagtaagcaa tgacaaacac attacatgta agcagtcatg gcattacatt ctgttaaacc
    14701 taagtttagc cgatatacac aacttcaacc tgactttatc gttgtcgata gcgttaatgc
    14761 gaatgccgtg aagcgagtcc acggcattgc ctgacgctta tattattgca atttcgcgct
    14821 gacccagcct ttcacactgg ctaacgctgc aggtaaggcc gcagcatccg taccaccggc
    14881 ttgcgccatg tcaggacgtc caccaccctt gccgcccacc tgctgagcga ccataccaat
    14941 cagttcccct gctttcacac gatctgtgac gtccttagat acgcctgcaa tcagagaaac
    15001 cttaccttcg gctaccgttg ccagcacgat aattgtcgac cccagctgat tttttaaatc
    15061 gtcaaccatg gtacgcaaca ttttcggctc aacaccgcta agctcgctaa ccaacagctt
    15121 aacaccatta acatcaattg ccttactgga aagatttgcg ctctcctgtg cggcagcttg
    15181 ttctttaagc tgttgtagtt ctttttctaa ctgacgcgta cgttccagta ctgagcgcac
    15241 tttatccgcc agattattgc tatcgccttt cagcagatgc gcgacttcgc ttaagcgatc
    15301 gctgtctgca tgaacggtgg tgatagcgcc ttctccggtt accgcttcga tacgacgaac
    15361 gcctgcagca gtacccgatt cagagatgat gcggaacaga ccaatatcac cagtgcggct
    15421 ggcgtgagta ccgccacaca gctcggtgga gaaatcgccc atgctcagca cgcgtacacg
    15481 ctcatcatac ttctcgccga acagcgccat cgcacctttc gctttcgccg cttcgagatc
    15541 catgatgttg gtttcgatcg gcaaattgcg acgaatctgt gcgttcacca ggtcttcgac
    15601 cgcacgaatc tcttccggtt tcatcgcttc gttgtgtgag aagtcgaagc gcagcacctt
    15661 gtcgttaacc agtgaacctt tctgcgatac atgagtcccc agaacctggc gcagcgcagc
    15721 gtgcatcagg tgcgttgcgg agtgattcag acgaatacgg gcgcgacgag cctcatcaac
    15781 atcagcctgc acagcgtcgc ccactttcag agaacccgca gcaagtttac cgatgtgacc
    15841 aatcgcctgg ccgtatttct gcgtatcttc caccgcgaag gagaagttag cgtctttcag
    15901 ttcgccttta tcaccaacct gaccgccgga ttccgcatag aatggtgttt gatctagcac
    15961 gaccacagct tcctggcctg cattgatggc atcaaccgct ttaccatcaa caaacagcgc
    16021 ggtcactttg ccgttcagtt ccagatggtc atagccttta aattcagatg cactatcaac
    16081 acggatcatt gcgttgtaat cggcaccaaa gccgctggct tcgcgcgcgc gacgacgctg
    16141 ctcttccatt gctgcttcaa aaccagcttc gtcaactttg atgttgcgct cacgacaaac
    16201 atcagccgtc aggtcaaccg ggaagccata ggtgtcgtac agacggaaag ccgtttcacc
    16261 atccagcgta tcaccagaaa gttttgccag ctcttcatcc agcaacgcca gaccgcgctc
    16321 cagagtacgg gcaaactgct cttcttcagt cttcagcacc tgctcaacct gcgcctgctg
    16381 gcgtttcagg tcttcacccg cagagcccat aacgtcgatc agcggaccaa ccagtttgta
    16441 gaagaaggtt tctttcgcgc cgagcatatt gccgtgacgc actgcgcgac gaatgatacg
    16501 acgcagtaca taaccacggt tttcattgga cggcattacg ccatccgcga tcaggaacgc
    16561 acaagaacga atgtggtcag cgattacgcg cagcgattta ttgctcagat cggtcgcgcc
    16621 agtgactttc gctaccgcct ggatcaacgt gcggaacagg tcgatgtcat agttagagtt
    16681 aacgtgttgc agcaccgcag caatacgctc cagacccata ccggtatcta cagacggctt
    16741 cggcagcggt tccatcgtgc catctgcctg gcggttgaac tgcatgaaga cgatgttcca
    16801 gatctcaatg tagcggtcgc cgtcttcttc cggacttccc ggagggccac cccaaatgtg
    16861 gtcgccgtga tcgtagaaga tttcggtgca cgggccgcac ggaccagtgt cacccatctg
    16921 ccagaagttg tcagatgcgt atggcgcacc tttgttatcg ccgatgcgaa taatacgttc
    16981 gcgcgggatc ccgacttctt tttcccagat ttcgtaggct tcgtcgtcgc tttcatagac
    17041 ggtaacccac agacgctctt tcggcagggc aaaccatttt tcgctggtca gcagttccca
    17101 tgcaaactga atggcatcgt gtttgaaata gtcgccgaag ctgaagttgc ccagcatttc
    17161 gaagaaggta tggtgacgcg cggtgtaacc gacgttttcc aggtcgttgt gtttaccacc
    17221 cgcacgcacg cagcgttggg aagtggtagc gcgggaataa ttacgcttgt cgagcccaag
    17281 gaacacatcc ttgaactgat tcatcccggc gttggtaaac aacaaagttg ggtcgttatg
    17341 gggtaccagg gagctgctgg caactacctg atgtccctta ctatggaaaa agtcgagaaa
    17401 cgcctgacgg atctcagcgg tgctcttgct cataattatc ctgaaatcaa gctaacgaaa
    17461 tatcgccacc agctccagcg tgtcttaacc gccgggctgg taactgaaaa gtgggaataa
    17521 gataagtttt cttgactggg aagtaaaata ccgtatgcgt tcagtcggca aaatttcgcc
    17581 aaatatcctg gatatcttcc atcagatagc cacgatagag cagaaaacgc tggatcttaa
    17641 ctttttctga aaagacagtt ggcaaaggtt catcatattt tcgcgtcgcc tgatcgcgcg
    17701 ccagtgcgca ccagtcgatg tcacattcac gcatcgcttt ttctgtcgct tcgcgggaaa
    17761 tacctttctg attcagttcc tgacgaatac gtgcaggtcc ataacctttg cggctacggc
    17821 tggcgataaa gcgcgcaaca aatcggctgt catcgagata gccatgttca tggcaccatg
    17881 caataacgcg ctcgtaatct tctgccgtag catcaatctc ttctgggcca tttttgccca
    17941 taatcggtgc cgcgagttta cgtcgcagtt cttgctcact gtgatcgcgc accgccagaa
    18001 tgcgtaccgc acgatccaac aggcgagcat atgccgggcg acgggacgtt gattctgtca
    18061 tggcatatcc ttacaactta aaaaagcaaa agggccgcag atgcgaccca ggttttgctg
    18121 ataaacagat ttaatagtca atgagtgtgc agaatgttcc cgcaggccca attcgttaga
    18181 ggatcgaggt gagagtaatt tttcacgcca gtgctggcct gttcccctca ccctaaccct
    18241 ctccccaaag gggcgagggg accgtccgtg cacacattat ctattatcat caataacgaa
    18301 cgattaaaaa tcttcgttag tttctgctac gccttcgctg tcatctacag agaaatccgg
    18361 cgttgagttc gggttgctca gcagcaactc acgtactttc ttctcgatct ctttcgcggt
    18421 ttccgggtta tctttcagcc aggcagttgc attcgcttta ccctgaccga tcttctcacc
    18481 tttgtagctg taccacgcgc ctgctttctc gatcagcttc tcttttacgc ccaggtcaac
    18541 cagttcgccg tagaagttga taccttcgcc gtagaggatc tgaaattcag cctgtttaaa
    18601 cggtgcagcg attttgttct tcaccacttt cacgcgggtt tcgctaccca ccacgttttc
    18661 gccctctttc accgcgccga tacgacggat gtcgagacga acagaggcgt agaatttcag
    18721 cgcgttacca ccggtagtgg tttccgggtt accgaacatc acaccaattt tcatacggat
    18781 ctggttgatg aagatcagca gcgtgttgga ctgcttcagg ttacccgcca gcttacgcat
    18841 cgcctggctc atcatacgtg ccgcaaggcc catgtgagag tcgccgattt cgccttcgat
    18901 ttccgctttc ggcgtcagtg ccgccacgga gtcaacgacg ataacgtcta ctgcaccaga
    18961 acgcgccagg gcgtcacaga tttccagtgc ctgctcgccg gtgtccggct gggagcacag
    19021 caggttgtcg atatcgacgc ccagtttacg tgcgtagatt gggtccagcg cgtgttcagc
    19081 atcgataaac gcacaggttt taccttcacg ctgcgctgcg gcgatcacct gcagcgtcag
    19141 cgtggtttta ccggaagatt ccggtccgta gatttcgacg atacggccca tcggcagacc
    19201 acctgcccca agcgcgatat ccagtgaaag cgaaccggta gagatggttt ccacatccat
    19261 ggaacggtct tcacccaggc gcatgatgga gcctttacca aattgtttct caatctggcc
    19321 cagtgctgcc gccaacgctt tctgtttgtt ttcgtcgata gccattttta ctcctgtcat
    19381 gccgggtaat accggatagt caatatgttc tgttgaagta attatactgt atgttcatac
    19441 agtatcaagt gttttgtaga aattgttgcc acaaggtctg caatgcatac gcagtagcct
    19501 gacgacgcac cgcatcacgg tcgccgctga agcattcccg ccgggtaatg ccttcaccgc
    19561 gggcagtggc aaaagcaaac cagacggtgc cgacaggctt ctcttcactg ccgccatccg
    19621 gcccggcgat accactaata gacacggcat aatcagcacg agccgctttc agtgcgccta
    19681 tcaccatttc caccacgacg ggttcactca ccgcgccatg ctgcgccagc gtctcttcgc
    19741 gtacgccgat catctgcgct ttggcttcgt tactgtaggt gacaaatccg cgttcaaacc
    19801 aggcggagct accggcaata tcggtaatca ctttcgctac ccaaccaccg gtacaagact
    19861 cggcagttgt tacggttgcg ccacgggctt tcagcgcctg cccaacctgt tcacttaact
    19921 gcatcagttc actgtcagtc atcacaacct ctgtcagtca aaaatttatg ccggacaaga
    19981 tagcactttc gtcaggaaga tggtgttggc gttgcaattt tacgaggagg attcagaaaa
    20041 aagctgatta gccagaggga agctcacgcc cccctcttgc aaatagttac tgcacgcgcg
    20101 ccagcgccac ggcttgtcct aactgccaga ccgccattgc gtaatgggtg ctgtggttat
    20161 aacgggtaat ggtgtagaag ttcggcagac cgtaccagta ctggtaaccg gtaccgacat
    20221 ccagacgcag caggctggct tgttgatggt tgcccagcgg ctgctgtggc gttaaacctg
    20281 ccgtggcaag ctgcgaaatg ctgtacctgg ttttgaagcc atttggcaag cctggagcct
    20341 gaccgtttgc cattaccgcg acctgatcgc ctttcaccca gccgtgcgct ttgaaatagt
    20401 tcgccacgct accgatcgca tcaaccggat cccacaggtt gatatgcccg tcgccgctga
    20461 aatctaccgc atattgtttg taagacgacg gcataaactg tccgtagccc atcgccccgg
    20521 caaaggaacc tttcagattg agcggatcgt cctgctcgtc gcgcgccatc agcaggaagg
    20581 tttccagctc gccagagaaa tactccgcgc ggcgtgggta gttaaatgac agcgttgcca
    20641 gcgcatcgag gatgcgagtt ttccccatca cgcgccccca gcgggtttca acgccgataa
    20701 tcccgacgat aatttccggc ggtacgccat acacctgcca cgcgcgattc aacgcatctt
    20761 catactgatt ccagaaaacc acaccgttct gcacgttgtc cggcgtaata aattttttgc
    20821 gataacgcag ccatgcgccg ttcggacctg atggcggttt caccgatgtg gttggtgcct
    20881 ggttatccat cagccgcagt accgaatcca gacgcttcgc ctgggagaga atttcctgca
    20941 actgctgacg atcgaaaccg tgtttgttca ccattttgtc gatgaactgc tgggcattcg
    21001 ggttattagc gaaatcgccg cccatctgca tcacattgtg ctgcggctca agcaggaagc
    21061 cgccagacgg cgttccggtg gtcgtttcag tctcagtagg ttttggcttg ctgctacagg
    21121 cggcaagcaa cacaaaaagg ggaaacaatg ttacataacg acgcttgaac atgaggggtc
    21181 catttaacag attcaaccag gggcaagtat ggtaaagcat cacgccccgc acaaggaagc
    21241 ggtagtcact gcccgatacg gactttacat aactcaactc attcccctcg ctatcctttt
    21301 actcaaactt ccaaattaaa atatttatct ttcattttta gattaaaata acacttttaa
    21361 atctttcaat ctgattagat taggttgccg tttggtaata aaacaataaa tcctgaagga
    21421 gagaacaatg atagaaacca ttactcatgg tgcagagtgg tttatcgggc tgttccaaaa
    21481 gggcggagag gtgtttaccg ggatggtgac cggcattctt ccgctgttga ttagcctgct
    21541 ggttatcatg aacgcactga ttaattttat cggtcagcat cgtattgaac gttttgctca
    21601 acgttgcgcc ggtaaccctg tttcccgtta cctgctgcta ccgtgcattg gcacgtttgt
    21661 cttttgcaat ccgatgacct taagccaggg tcgctttatg ccggaaaagt acaaacccag
    21721 ctactacgcg gcggcctctt atagctgcca ctcaatgaat ggcctctttc cccatatcaa
    21781 ccctggcgaa ctgtttgttt atcttggcat tgccagcggt ctgacaacgc tgaacctgcc
    21841 acttggccca ctggcggtga gctatctgct ggttggtctg gtcaccaact tctttcgcgg
    21901 ctgggtgacc gatctgacca ccgccatttt tgagaaaaag atgggcattc aacttgaaca
    21961 aaaagttcac ctggcaggag caacatcatg acgcgtattc ggatcgaaaa aggaacgggt
    22021 ggctggggcg gcccgcttga gctggaagcc acgccgggca aaaaaatcgt ctatatcacc
    22081 gccggtaccc ggcctgcgat tgttgacaaa ctggcacaac ttactggctg gcaggctatt
    22141 gacggattta aagaaggtga acccgcggag gcggaaattg gtgtcgcggt aatcgactgt
    22201 ggcggcacat tacgctgcgg catctatccg aaacgacgta ttcccaccat taatatccac
    22261 tcgacgggca agtccggtcc gctggcgcag tacattgtgg aagatattta tgtctctggc
    22321 gtaaaagaag aaaacatcac tgtagtgggt gatgcgacac cacaaccctc ttccgtgggc
    22381 cgtgactatg acaccagtaa gaaaatcacc gaacaaagcg atggtttact ggcgaaggtg
    22441 ggaatgggca tggggtccgc cgttgcggtg ctgtttcaat ctggtcgtga caccatcgac
    22501 actgtattaa aaaccattct gccgtttatg gcattcgtct cggcgctcat tggcatcatt
    22561 atggcttctg gccttggtga ctggattgcc cacggtcttg ctccgctggc gagccatcca
    22621 ctgggtctgg tcatgctggc gctcatctgc tccttcccac tgctttcacc tttcctcggc
    22681 ccaggcgcag ttatcgcaca ggttatcggc gtattgattg gcgtgcagat tggtctcggc
    22741 aatattccgc cgcatctggc tttaccggca ctgtttgcca tcaacgcgca ggcggcctgc
    22801 gacttcatcc cggtcggttt gtcgctggcg gaagcccgtc aggacacggt tcgcgtcggt
    22861 gtcccttctg tactggtgag ccgcttttta accggcgcac cgactgtact gatcgcctgg
    22921 tttgtctccg gttttatcta tcaatagagg ctgaaacatg accgttattt ataagaccac
    22981 catcacccgt atcggcgcga gtgccactga cgccctcagc gaccagatgc tcatcacctt
    23041 tcgtgaaggc gcgccagcgg acctcgaaga gtattgcttc attcattgcc acggcgagtt
    23101 gaaaggtgca ctccatcccg gtttgcaatt tacgctcggg cagcatcgct atccggtgac
    23161 cgctgttggc agcgtggcgg aagacaacct tcgcgaactg ggtcatgtca ccctgcgctt
    23221 cgatggttta aacgaagcgg aatttccggg cactgtccat gtggcaggcc ctgtacccga
    23281 cgatatcgcg ccgggatcgg ttttgaagtt tgaatctgtt aaggagtaaa aaatgaatca
    23341 ggttgccgtt gtcatcggtg gtgggcaaac cttaggcgcg ttcctgtgcc acggtctggt
    23401 tgccgagggg tatcgcgtcg cggttgtcga tattcagagc gacaaagccg caaatgtggc
    23461 acaagaaatt aacgccgaat atggtgaaag tatggcgtac ggttttggtg ctgacgccac
    23521 tagcgagcaa agcgttctgg cgctctctcg tggggtagat gaaatctttg gtcgcgtgga
    23581 tttgctggtc tatagcgccg gaatagcaaa agcagccttt atcagcgact tccagctcgg
    23641 cgattttgac cgttcgctac aagtgaatct ggtgggttat ttcctgtgtg cccgtgaatt
    23701 ttcgcgtttg atgatccgcg acgggattca gggtcgcatt attcagatca actcgaaatc
    23761 cggcaaagtg ggcagcaaac acaactctgg ctacagcgca gcgaaatttg gtggcgtcgg
    23821 gctgactcaa tcactggcgc tggatctggt ggagtacggc attacggtgc attcactgat
    23881 gctcggtaac ctgctgaaat cgccgatgtt ccagtcactg ttgccacaat acgcgaccaa
    23941 gctgggtatc aaaccggatc aagtcgagca gtattacatt gacaaagtac cgctcaaacg
    24001 cggctgcgat tatcaagatg tgctgaatat gctgctgttc tacgccagtc ctaaggcgtc
    24061 gtactgcacc ggacagtcga tcaatgtcac cggcggtcag gtgatgttct gatcaacagc
    24121 ggagatccat taaggatctc cgtgagacta tagaatgcct gatgcgctac gctcatcagg
    24181 catacaggac ttccgccact acattaagga aaagttatgg tatccgcact catcaccgtc
    24241 gccgttatcg cctggtgtgc gcaactggcc ttaggcggct ggcaaatttc tcgttttaac
    24301 cgtgccttcg acacactatg ccagcaaggg cgggttggcg tgggtcgttc cagcgggcgc
    24361 tttaaaccgc gggtcgtggt cgccatcggc tggacgatca gcagcgcatc gtcgacacct
    24421 tgtttatgaa aggactgacc gtcttcgccc gaccgcaaaa aattcccgca attaccggta
    24481 tgcatgcggg tgatttacag cccgatgtga tctttcccca tgatccacta tcacagaatg
    24541 ctctatcatt ggcgcttaaa ctgaaacgtg gataatttcg ttgtgaatgt tacttgcttg
    24601 cgaagttatc attttgaaac ctaaatcagg taatcacgcc catgaaacct cgtcagcgtc
    24661 aggccgccat tctggagtat ctgcaaaagc agggtaaatg ctcggttgaa gaattggcgc
    24721 aatactttga caccacaggc acaaccattc gcaaagatct ggtcattctg gaacatgccg
    24781 gaaccgtcat tcgtacttat ggcggagtgg tgttgaataa agaggaatcc gatccgccta
    24841 tcgatcataa aacactcatc aacacccaca agaaagagct gattgcagaa gctgccgtta
    24901 gttttatcca tgatggcgat tcgatcattc ttgatgctgg cagtaccgtt ttgcagatgg
    24961 ttcccctgct ctcgcgcttt aataacatca cggtgatgac caacagcctg catatcgtca
    25021 atgcgctatc cgaactggat aacgaacaaa ctatcctgat gccaggcgga acgtttcgta
    25081 aaaaattggc ctcatttcac ggacagctgg cagagaatgc cttcgaacat ttcagtttcg
    25141 ataaattgtt tatgggcacc gacggcatcg atctcaatgc gggcgtaacc accttcaacg
    25201 aggtttatac cgtcagtaag gcaatgtgca atgccgcgcg cgaagtgatt ttgatggcgg
    25261 actcatcaaa gtttggccgt aaaagcccca acgtagtttg cagtcttgaa agcgtcgata
    25321 agctgattac cgacgcaggt atcgatccgg cgtttcgtca ggcgctggaa gagaaaggga
    25381 tcgatgtgat cataaccgga gagagcaatg agtgaagcac tactgaacgc gggacgtcag
    25441 acgttaatgc tggagttgca ggaagcaagc cgtttaccgg aacgtctggg cgatgatttt
    25501 gttcgcgccg ccaatatcat cctgcactgc gaaggcaaag tggtggtttc gggaattggc
    25561 aaatcgggcc acattggtaa gaaaatcgcc gcaacacttg ccagtaccgg cacaccggct
    25621 ttttttgtcc atccggcaga agcactgcac ggcgatctgg ggatgattga aagccgcgat
    25681 gtgatgctgt ttatctctta ctccggtggc gcgaaggaac tggatctgat tattccgcgt
    25741 ctggaagata aatctatcgc gctgctggcg atgaccggca aaccgacgtc accgctgggc
    25801 ctggcggcaa aagcggtgct ggatatctcc gtagaacgcg aagcctgccc gatgcacctt
    25861 gcgccgacct ccagcaccgt caataccctg atgatgggtg acgcgctggc gatggcggtc
    25921 atgcaggcgc gcggatttaa tgaagaagat tttgcccgct cccacccagc cggggcactg
    25981 ggcgctcgct tgctgaataa agtgcatcat ctgatgcgcc gtgacgatgc catcccacag
    26041 gtggcgttaa ccgccagcgt gatggatgcg atgctggaac tcagccgcac cggtctgggg
    26101 ctggtggcgg tatgtgacgc tcaacaacag gtacaaggcg tctttaccga cggcgattta
    26161 cgtcgctggc tggtaggcgg cggcgcactc accacgccag ttaatgaagc gatgacgaca
    26221 ggcggcacca cgttacaggc gcaaagtcgc gccatcgacg ccaaagagat cctgatgaag
    26281 cgcaaaatca ctgccgcacc ggtggtggat gaaaacggca aactcaccgg cgcaattaac
    26341 ctgcaggatt tctatcaggc cgggattatt taatccttca ttcccagacg tttcgccagc
    26401 cgatgcaggt tggcgacgtc ggtttccagc atccgcgcgc aggcagccca gttatgatga
    26461 ttttgtgcca gtgcctggcg aatagtttca cgctggaacg cttctgtcgc ttcacgcagg
    26521 ttttgcttaa caacgggcac cgccgccgct tctggcggcg gcaacgtcac ctcaggaaaa
    26581 gcaaaatgtt gcgcctcaag aatcacttca tcgccgttgc gggtggctct cgccagcact
    26641 accgcccgat gaatagcatg ttccagttcg cgcacgttcc ccggaaaacg atagtgttgc
    26701 agtaaatttc gcgctccggc acttaatacc acgcgggaga gccccagccg caaacgacac
    26761 tgttcgcaga aataccccgc cagcagaatg acatcatcgc cccgctcacg cagcggcggc
    26821 accgaaagtg gaaacacgct caggcgatga aacaagtcag cgcgaaatcg ccctgccagc
    26881 acctcttcgc gtaagtcgcg gttagtcgcc gccagcacgc gcacatcgac ccgcaaacta
    26941 cggtcatcgc caacgcgctg aatatcgcca tactgcaaca ccctcagcag cttggcctgc
    27001 aatgccaacg acaactcgcc gatctcatcc agaaacagag tgccgttatc cgccatttca
    27061 aacttcccgc tgcggttact gatagcgcca gtaaacgctc ctttcacatg cccgaacaac
    27121 tcactttccg ccacactttc cggcagtgca gcacagttga gatagaccag cggattcacc
    27181 gcccgtggcg aggcttcatg aatcgctttc gccaccagct ccttaccggt tcccgtctca
    27241 ccgctgatca ggacgttgag atcggacgcc gccacaatct caatctcttt tttcagttgc
    27301 gtcatgccag gggacaagcc aatcatctgc gtctgtttca ccgcttcaaa cggcgtggca
    27361 tcgcctggca tcatattctg gctttccagt tgttcaatca gcaacgcatt gcttaacgct
    27421 cccgccgcca gcgcagcaat cagccgtagc tcttcgtcgc tgaaaacatc gaactgatcg
    27481 ggctgcatcc cgtcgagcgt cagtgcgccg atcaggtttt gcccggcaaa caatggcaga
    27541 ccaacgcagg cgtgaacctt cagactctcc tgcccaggaa tcaaaccgtc atagggatcg
    27601 ggcaattcgc tgtctgcggg aaagcgcacc acatccccgg cgcgggcaat cgcttccagc
    27661 cgtggatgcc cttccagcgc aaagcgtcta ccgagtacac cctttgccag accgtcgatg
    27721 gcaagcggaa taaactgccg cgaatcgtaa cgtagcaacg cagacgcatc gcactccagc
    27781 acctgacgta gcgtggtgat caggcgctga aaacgatcct gatgaccaat cccacgctgc
    27841 aattcgatgg cgatattcgc cagcacatca acggaaaaac tcatctttgc ctcactgtca
    27901 atttgactat agatattgtc atatcgacca tttgattgat agtcattttg actactcatt
    27961 aatgagcata attttattta tagagtaaaa acaatcagat aaaaaactgg cacgtaatct
    28021 gcaattagca agacatcttt ttagaacacg ctgaataaat tgaggttgct atgtctattg
    28081 tggtgaaaaa taacattcat tgggttggtc aacgtgactg ggaagtgcgt gattttcacg
    28141 gtacggaata taaaacgctg cgcggcagca gttacaacag ctacctcatc cgcgaagaaa
    28201 aaaacgtgct gatcgacacc gtcgaccata aattcagccg cgaatttgtg cagaacctgc
    28261 gtaatgaaat cgatctggcg gatatcgatt acatcgtgat taaccatgca gaagaggacc
    28321 acgctggggc gctgaccgaa ctgatggcgc aaattcccga tacgccgatt tactgtactg
    28381 ccaacgctat cgactcgata aatggtcatc accatcatcc ggagtggaat tttaatgtgg
    28441 tgaaaactgg tgacacgctg gatatcggca acggcaaaca gctcattttt gtcgaaacgc
    28501 caatgctgca ctggccggac agcatgatga cttacctgac aggcgacgcg gtgctgttca
    28561 gtaacgatgc tttcggtcag cactactgcg acgagcatct gttcaacgat gaagtggatc
    28621 agacggagct tttcgagcag tgccagcgtt actacgccaa tatcctgacg ccgttcagcc
    28681 gcctggtaac accgaaaatt accgagatcc tgggctttaa cttaccagtc gatatgatag
    28741 cgacctctca cggcgtggta tggcgcgata acccgacgca aattgtcgag ctgtacctga
    28801 aatgggcggc tgattatcag gaagacagaa tcaccatttt ctacgacacc atgtcgaata
    28861 acacccgcat gatggctgac gctatcgccc aggggattgc ggaaaccgac ccacgcgtgg
    28921 cggtgaaaat tttcaacgtc gcccgaagcg ataaaaacga aatcctgacc aatgtcttcc
    28981 gctcaaaagg cgtgctggtc ggcacttcga cgatgaataa cgtgatgatg ccgaaaatcg
    29041 ccgggctggt ggaggagatg actggtttac gcttccgtaa caaacgcgcc agtgctttcg
    29101 gctctcacgg ctggagcggc ggtgcggtgg atcgtctttc cacgcgcctg caggatgcgg
    29161 gtttcgaaat gtcgcttagc ctgaaagcga aatggcgacc agaccaggac gctctggagt
    29221 tatgccgtga acacggtcgc gaaatcgccc gtcagtgggc gctcgcgccg ctgccgcaga
    29281 gcacggtgaa taaggtagtc aaagaagaaa cctctgccac cacgacggct gacctcggcc
    29341 cacggatgca gtgcagcgtc tgccagtgga tttacgatcc ggcaaaaggc gagccaatgc
    29401 aggacgttgc gccaggaacg ccgtggagtg aagtcccgga taacttcctc tgcccggaat
    29461 gctccctcgg caaagacgtc tttgaagaac tggcatcgga ggcaaaatga gtaacggcat
    29521 tgtgatcatc ggttcgggct tcgccgcccg ccaactggtg aaaaatattc gcaaacagga
    29581 cgccactatt ccattaaccc tgattgccgc cgacagcatg gatgagtaca acaaacctga
    29641 cctcagccat gttatcagtc aggggcaacg tgccgatgac cttacccgcc agacggcggg
    29701 tgaatttgcc gagcagttta atctgcacct gtttccacaa acctgggtga cggatatcga
    29761 tgccgaagcc cgtgtggtga aaagccagaa taatcagtgg caatacgaca agctagtact
    29821 ggcaaccggt gccagtgcct ttgtcccgcc tgtgcctggg cgtgagttaa tgctgacgtt
    29881 aaatagtcag caagagtatc gcgcctgtga aacgcaactg cgggatgccc gacgcgtgtt
    29941 gattgttggc ggtggtttga ttggtagcga actggcgatg gatttttgtc gtgcaggcaa
    30001 agcggtcacg ctaatcgaca acgctgccag tattctggcg tcgttaatgc caccggaagt
    30061 aagcagccgc ttgcagcatc ggttgacgga gatgggcgtt catctgctgt tgaaatctca
    30121 gttacagggg ctggaaaaaa cggattctgg cattctggca acgctggacc accagcgtag
    30181 tatcgaagtg gatgcggtaa ttgccgccac cggactgcgc ccggaaacag ccctggcacg
    30241 acgcgccggg ctgacgatta atcgcggcgt ttgcgtcgat agttatctgc aaaccagtaa
    30301 tgacgatatt tatgcgctgg gcgattacgc ggaaatcaac ggtcaggtac tgccattcct
    30361 gcagccgatt caacttagcg cgatggtgct ggcaaaaaat cttctcggca ataacacgcc
    30421 gctgaaacta ccgacgatgc tggtgaaaat caaaacgccg gaattaccgc tgcatctggc
    30481 aggcgaaacc cagcgtcagg atttacgctg gcaaattaat accgaacgct agggaatggt
    30541 ggctcgcggt gttgacgatg ctgaccagct tcgcgccttt gtggtcagtg aggatcggat
    30601 gaaagaggca tttggattgt tgaaaacatt gccgatgtag gtgggctact gtgcctaaaa
    30661 tgtcggatgc gacgctagcg cgtcttatcc gacctacggg gacgcatgtg taggccggat
    30721 aaggcgttta cgccgcatcc ggcaatggtg tccaaatgca acacgtttta tccgttctgg
    30781 acttcacccg ctaaccaacg cgccgcagca ataaccccct gccccagaga caaaccgcca
    30841 tcacccgccg gtaaactctg tggaaagagc aatgtgaaat cagcgagata atgcgccaga
    30901 cgtgcacgca gcaaacggtt atgaataacc ccgccgctaa ataccagcgt agtgatacca
    30961 cgcatcgtgg cctgctcacg catcaacgcg gcaaaaccct gcgccagcgc atcatgaaac
    31021 gcccacgcgc gttgattaac ctgtgcctgc cagttcagcc actgctgcca gaaagcggcg
    31081 agatccagtt gattgtccac cagcggcatc gtcaccggat gcgtcactcc gtggcatgag
    31141 gctgcgagcg cctccagagc acaagccgct tcaccttcat aacttaacgt ggctggcgca
    31201 cagcccagtg ccgccgccac tgcatcgaac aaccgcccac acgatgacgc cagcggcgcg
    31261 ttaattccac gctcaatggc ccgcgccagc acgctccagt tttgctgttg cacacttgct
    31321 gtttcagggt aattctgcca ctccggcaca aagcgcaggc actgcgccag caggtttcgc
    31381 cacggctgct tcgctgccaa atcgccaccc ggaagcgcca ctgcaggcaa gccgcccagg
    31441 tgctcacatt cgcgatagtt cacccgcagg cactcgccgc cccacaaagc gccgttctcc
    31501 cccataccga taccgtcgag cgtcaaagca atgacatcac cgccatccag cggccactga
    31561 tgctctgcca gacacgccgc tgcatgggca tgatgatgca gtaccgtttg cgtcggcaga
    31621 ttcatttcac gcgcccactg gctggagaca tagcccggat gcgcgtcatg cacaacgtat
    31681 ttcggggtaa aatcgtagat gttttgcatc aggcgtaacg cttcgcgcca ctgcatctgg
    31741 atgccatcgt cacttaaatc gcccagatgc tgactcaaca ccgcttgttc accgcgcacc
    31801 aggcagaagg tatttttcag atccgctccg agacacagca caggcggaac atttttaaag
    31861 cccggaggca aagccagcgc atccggcaca tacccccgcg aacggcgcag catttcgccg
    31921 ctttcgcgca ccaccgaatc atccatccgc tgcacgatgt cgcggttatg tatcaagaat
    31981 ccgtcggcaa tgccctgcaa atccgccagc gcctgttcgt tgctgatagc tggtggttta
    32041 ccgctcaggt tgccggaggt catcaccagc gggcattgca gttcctgtaa cagcaaatgc
    32101 tggagcgggt tcgcaggcaa cattaccccg acttcgttaa ggtcaggggc gatatcatca
    32161 caaagctcag gaacgtattt tttatccacc agcacaatcg gcgcggcggg cgtggtaagc
    32221 aactggcgcg cagcgtctgg taaaccgtca gccactggca acatgaccgc cagcggtttc
    32281 gccgggcgat gtttgcgcgc ccgaagtgtc gccaccgcgt tactgttacg tgcatcgcag
    32341 gcaagatgaa atccgccaat ccctttgatg gcgacaatgt tgcccatttt taactgtgcg
    32401 atagccgcct gtaatgccgc ctcttgttct gcatgttcac catgacttac ccattcaaga
    32461 tgcgggccac actccgggca ggccaccggc tgggcgtgga agcgacgatc gagcgggtcg
    32521 cggtactctt tgtcacaagc cggacacaac ggaaacgccg ccatcacggt aaacgggcgg
    32581 tcgtaaggca tggcgcgaat aatggtgaaa cgcgggccgc agtgggtaca gttgataaac
    32641 ggataacgat aacgccgttc gcctggggta ttcatttcgg caaggcaagc agggcaagta
    32701 gcggcatccg ggacaatttg cgtattcatg gcacctcccg cgctctggcg gatggtgaac
    32761 tcagtgggca gttgtgacca gatgtacggc tcacgctcga cgctatcaat acgcgccagc
    32821 ggcgggcagt gctgatgcaa ttgaacaaga aacgtttccg ggtcttcccg cagccggact
    32881 tctacgccat cgccgtcatt acagacatcg ccgtgaagat ttaattgctg tgccagctgc
    32941 cagacaaacg gacgaaaacc gacgccctgc actttgccac gaatacgcag ttggacaccg
    33001 caagatgtgt tttttgccat tgagttattc ccgccatcat gaattgcgta acccgcccag
    33061 ccggacacga cagcgtcgca tccggcagtc acaggtcggc gataccgcct gctccgtatt
    33121 ctacgaatat ttccgggaat tcctttgatg ccagaacagt tctgtaagat ttttagaaca
    33181 tcagcgccgt acggcggcgt ttttctgcac tcagttgttc aagtttatta cgatcgacac
    33241 aaatcagcgc atgagtcggg caagccgcca tacacgccgg gccgtcttca cgatggttgc
    33301 acaggtcaca tttattggct tcggctttgt cagcccgtac attcagcccc gcgccgctgt
    33361 tgcgaatcac cggacgtacc accacttcca tcgcgccata cgggcaagcc acaacgcagg
    33421 ttttgcaacc aatgcaacgt tcctgcatca catgaacaaa ccctttatca cggctgatag
    33481 caccattcgg gcagacgtta gcgcacggtg catcttcaca ctgacggcaa actgtcgccg
    33541 tggaaatgtt cacaccttta atgacatgga tacgcggtaa aaatgtttcc ggggtcagcg
    33601 atgcacagtc ctgattttcc tgatgagaaa ccacgcacgc cacttcacag gtacggcaac
    33661 caatacattt actcgcgtca gcaatgatga aacggttcat caaattctcc agcaatgaca
    33721 gttaatgcgc cgatacattc acaaatcatg ccagttttta atttactgtt atttaaggaa
    33781 attaatttct gtaatgcagg aaaaaagatg tcatcgacac tagtgacgat gacatgtgat
    33841 gacaatgttt atcgcgaaag agcaatgagt gagtcgcggt ggatcagttt tccgctgaag
    33901 gttttcggcg gtgagaaatc cccgccatcg agcataaaaa tcagccgtcc aataatttcc
    33961 tgaatcatct cagtcaccgg aatttttacg ctggagagcg ccggaacgat atagggggca
    34021 attgcgatat catcgaatcc gataactgac acctgctctg gcaccgctac gccgcgctcg
    34081 tgcaacgctt tcatcgcacc tatcgccata tcgtcgttac tggcaactaa cgcgctaaat
    34141 ttagccccac gttcgagcaa cgtttctacc ccttcggccc cgctggcggg cgtccattta
    34201 ccgttagcga taagtttttc attgagcgca ataccatgct gcgccagcgc gtctttatac
    34261 ccagcaagac gttcaatgct ggtgggggaa tccatcgagc cggtaaggaa agcaatctcc
    34321 tgatgtccgg cgtttatcaa ctctgccacg gcattaaagc tggtctgttt atgatcgcac
    34381 cagacgctat ggctgctgtt tttgcgcagg cggcgattaa gcaccattat cggctgactg
    34441 tgcgcgtcaa tgatgtcatc gatctcatcc acgcttaaaa aacgcgggta aatcataatg
    34501 gcgttgcagc gcaaatccag cagatactga atcgcctggc gctcttcttc ggcgctgtgt
    34561 ttaccatctg ccaatagcaa ctgccgccct ttctcttccg ccattcgcgc ggcatgaaag
    34621 agtaattcac taaaataaat gccgtggtaa agcgtgttgg tcactaccag ccccagcgtc
    34681 tgagtactct tcgccgacag attgcgcgcc agcaagtttg ggcggtaacc gctctcttct
    34741 accgcctgaa acacgcgatc tttagtctcc tggctgacgt agccattacc tgaaagcacg
    34801 cgggaaacgg tcgcttttga aaccccggcg cgcttcgcca cttccagcat cgtcgtcatc
    34861 attttcatcc ctttacacgc aatcaacgca gtgtactgca ccgtttgccg attgtccttg
    34921 cgcaatcggc gggaaaaata ttcaggtgac cggtttcaca aatataaaaa atgaataatt
    34981 aactctcttg cttatttagt gacaactatt catgattttg tgaaaccggt ttcctaattc
    35041 cgtttcagca tcggcatttt tccgttacgt cgactgataa caactacatc taccctactg
    35101 ataacaggat aaaatccgat ggccaaaaat tatgcggcgc tggcacgctc ggagatagcg
    35161 gcactgggcg gcgttgataa catctcggcg gtcacgcact gtatgacgcg tttgcgcttt
    35221 gttatcaaag atgaccagct tatcgacagc ccgacgttaa aaaccatccc cggcgtgctc
    35281 ggcgtggtac gtagtgacaa ccagtgtcag gtgattatcg gcaataccgt ttcacaagcc
    35341 tttcaggaag tcgtcagcct gctgccggga gatatgcagc ccgcacagcc cgtgggtaaa
    35401 cccaaactca cgccgcgtcg cattggtgcg gggatcctcg atgcgctgat cggcaccatg
    35461 tcaccgctga tcccggcgat tatcggcgga tcgatggtca aactgctggc gatgatcctc
    35521 gagatgagcg gcgtgctgac aaaaggatcg ccgaccttaa ccattctgaa tgtgattggt
    35581 gacggtgctt tcttcttcct gccgctgatg gtcgcggcat ctgccgacat caaatttaaa
    35641 accaatatgt cgctggcgat tgccatcgcg ggtgtgctgg tacatccgag ttttattgaa
    35701 ctgatggcga aagcggccca gggtgaacat gtcgaatttg ccctgattcc ggtcaccgcg
    35761 gtgaaataca cctacacagt gatcccggcg ctggtgatga cctggtgcct gtcatatatc
    35821 gaacgctggg tggatcgcat tacaccggcg gtgaccaaaa acttcctcaa gccaatgctg
    35881 attgtgttga ttgccgcacc gctggcaatc ctgctgattg gcccgattgg tatctggatc
    35941 ggtagcgcca tttcggcgct ggtttacagc attcatggtt atctgggctg gctttcagtc
    36001 gccattatgg gcgcgctgtg gcctctgctg gtaatgaccg ggatgcaccg cgtctttacg
    36061 ccaaccatca ttcagaccat tgccgaaacc ggcaaagaag ggatggtcat gccgtcagag
    36121 atcggcgcta acctgtcgct gggcggttca tcactggcgg tggcgtggaa aacgaaaaac
    36181 ccggaactgc gccagacggc gctggctgcg gcggcatcag ccattatggc ggggatttcc
    36241 gaaccggcgt tatacggcgt ggcgatccgc ctgaaacgtc cgcttatcgc cagtcttatc
    36301 agcggtttta tttgcggcgc ggttgccggt atggcggggc ttgccagcca ctcaatggca
    36361 gcgccggggc tatttaccag cgtgcaattc ttcgatccgg cgaatccaat gagcatcgtc
    36421 tgggtgttcg cggtcatggc gctggcggtg gtgctgtcgt ttatcctcac actgttgctc
    36481 ggctttgagg atattcctgt tgaggaagcg gctgcccagg cgcgaaagca tcagagcgta
    36541 caaccgaccg tcgccaaaga agtaagtctt aattgaggat gaaaatgtca gtatttccag
    36601 aaggtttttt atggggcggc gcgcttgccg ccaaccagtc tgaaggtgcg ttccgtgaag
    36661 gcggaaaagg gctgaccacc gtcgatatga tcccacacgg cgagcatcga atggcggtga
    36721 aactggggct ggaaaaacgt tttcagttgc gcgatgacga gttttatccc agccatgagg
    36781 cgacggattt ttatcatcgt tataaagaag atatcgccct gatggcagag atgggattca
    36841 aggttttccg tacctcaatt gcctggagcc gtctctttcc gcagggcgat gaaatcacgc
    36901 ccaatcagca gggcattgct ttttatcgtt ctgtctttga agagtgtaaa aagtacggta
    36961 tcgaaccgct ggtcacgttg tgccacttcg atgtgccgat gcatctggtc accgaatatg
    37021 gctcctggcg taaccgcaag ctggtggagt ttttcagccg ctacgccaga acctgctttg
    37081 aagcatttga tggtctggtg aaatactggc taaccttcaa tgaaatcaac attatgttgc
    37141 atagcccgtt ctccggcgcg ggtctggtgt ttgaagaagg tgaaaatcag gatcaggtga
    37201 aatatcaggc cgcgcatcac cagctggttg ccagtgcgct agccgccaaa atcgcccatg
    37261 aggttaaccc gcaaaatcag gtgggctgta tgctggcggg cggcaacttc tacccttaca
    37321 gctgcaaacc ggaagatgtc tgggcggcgc tggagaaaga tcgggaaaac ctgtttttta
    37381 tcgatgtgca ggcgcgcggc gcgtatccgg cttactctgc ccgcgtattt cgcgaaaaag
    37441 gggtaaccat agataaagcg ctgggcgatg atgagatcct gaaaaacacc gtcgattttg
    37501 tctctttcag ctattacgcc tcgcgctgcg cctcggcgga gatgaacgcc aacaacagca
    37561 gtgcggcgaa cgtggtgaaa tcgctgcgta acccgtatct gcaagtgagc gactggggct
    37621 ggggaattga tccactcggt ctgcgtatca ccatgaatat gatgtacgat cgttatcaga
    37681 agccgctgtt tctggtggaa aacggcctcg gcgcaaaaga tgaacttgct gccaatggcg
    37741 agattaacga tgactatcgc atcagctatt tacgcgaaca tatccgcgca atgggcgaag
    37801 cgattgcaga tggcattccg ctgatgggct acaccacatg gggctgtatt gatttagttt
    37861 ccgcctctac gggtgaaatg agcaaacgct acggttttgt ctacgtagac cgtgacgacg
    37921 caggcaacgg cacgctgacg cgcacacgta agaaatcgtt ctggtggtat aaaaaagtga
    37981 ttgccagtaa tggggaagat ttagagtaag taacagtgcc ggatgcggcg tgaacgcctt
    38041 atccggccta catgtcgcac gaaccaggaa ggcccgataa gcgcagcgca tcgggcaatt
    38101 tagcatttgg catcagagct ggttcacccc atcaagaaca tccctgtcct gattccttaa
    38161 tgaaaaacta ctcttcttcc accgctaact gcgcgaagcc gccattccct tcccagcctt
    38221 ccagtcgttg ataaacggtt tctaccgcat ctttaatcgg ctgggtcatc gggtagtaaa
    38281 agccgacgat atccggctgt atgccgagga aaatcacttc gccaatatct tctttcaact
    38341 ggtcgataag atagttcaga ggcatgttat gggtagtcat cataaacatc tcggcgatat
    38401 catccgggtc gatgatgcgg atctcgccgg ggtttagccc catatccgtg gcgtcgacaa
    38461 tcagtaaccg cgtagggcgc agttcacgga tggcgacgat gtcgttttcc ggtgcactac
    38521 cgccgtcaat caccacccag ttacctttcg gcgcggcggc gcacttttcc gccagcagcg
    38581 gacctgcgcc atcatcgccc atcatgctat tgccaacaca gagtaaaacg tcagtcacgc
    38641 aatctcctca ccatcaaata gatggcgttt tcctgatgaa tatcatgcag catacttaac
    38701 agcattgtac tccattcctg ctgctgcgaa gtttgcgctg cccgggcttt atcgaatgcg
    38761 ttggccagca tcggcacatg gttaatgtcg atgacgatct caccgtactt cggtacgcct
    38821 tccattttgc ggcgggcttc actgcccgcc tccagagtgg caatccatgc cagatattca
    38881 tcccacgggc aggtgagcgc cgcttccagg caatcgataa ccccaaggtg gtgaccaatc
    38941 gccaggctgt aatagaccac ctgctgcgcc tcggcgggcg tggcatcgtt ctcatcaata
    39001 aatttacggc tcagttgact gaacaccacc ttttcactca tcggatacgc acctcttcta
    39061 caacatgatt cagatggctg acaatctcgt tcagacgcgg atcgttttcc gcttccagcc
    39121 agcgtgcaac ctgttcttcg ccctgcccta actgtgtcag gaagtcatcg gcaatctgac
    39181 gaccgtaacg ataacccgcc aggcggcgtg cttcgcgatc cactttcacg cgcagcggct
    39241 gcaccatatc gccatgcagg atctccgccg gttgttcatc cagttcaccc ggcccacggg
    39301 cgtgaatttt ctgctccagc aggccgagcg ccattgcaaa gccgtacagc gtggcggcag
    39361 gcgttggcgg gcagccaggg atataaacat ccacagggac aattttatcc gtaccgcccc
    39421 acacgcagta gagatcgtgg aagatcccgc cgctgttacc gcaggcaccg taggagatac
    39481 aaattttcgg gtccggcgcg gactgccacg cacgcagcgc aggggatcgc attgcacggg
    39541 tgaccgcgcc ggtaaacagt aaaatatccg catgacgcgg tgaaggaacg actttaatgc
    39601 cgaagcgttc tgcatcaaac agcggcgata aagtggcgaa aatttcgatt tcgcagccgt
    39661 tgcagccgcc gcagtccacg cggtaaacat aggcagaacg tttgattttt ttcagtaacg
    39721 acgccttcat gctggcgatg gattcatcca ccgtcatcgg gaccggaatg ccgttggcgt
    39781 cacgggggcc taataaattg ctcatcagat ggcctctttc atatggcgag tcagttcaat
    39841 acggtcggac ggcaccaggc atttctggcg cttacattcc gggcaagtct caaagctttc
    39901 gcggtggttt tccgcgcggc tgtcgccgtt gtgcttaagc agcgcaatgg cgtagtcgat
    39961 ctctttctgg acggcgaaag gacgattgca gacgcgacag ttgcacagcg cgaagcgaga
    40021 ctgttgcagg aagtcttctt tcttccacac cgccagttcg tactcttgcg acagcttaat
    40081 cgccgccgtc gggcaaactt cttcgcagcg tccacagaag atgcagcgcc cgagattaaa
    40141 ctcccaggcc agctctcctg tggcgaggtc agtttcaacc gttaaggcgt ttgacgggca
    40201 ggcattgacg caggccgcgc agccgatgca ctgctgcggg ttctgctctg gcttaccacg
    40261 gaagttttta tcaaccgcaa tcggctccag cggataagac gaggtcgccg taccggtttt
    40321 gataactttt ttgataaagg taaacatggc gattccttat ttcagcggcg agtttttacg
    40381 ctcaatgctg tagcgctcga gttctttgta cggcaccact ttgctcttct tcttacgtac
    40441 atcgaccaca gtcatgcggt cggtacagga gtagcaaggg tccaggctac cgataatcag
    40501 cggcgcatcg gaaacagtgt tgccacgcag catgtagcgc agggtcggcc agttcgcgta
    40561 ggtcgcggca cggcagcgcc agcggtacag cttctggttg tcgccagtca tgctccagtg
    40621 gatatcatca ccgcgcggcg cttcggcaaa gcccagcgcg aaacggtgcg gaatgtaggt
    40681 aaagccttcc accatcagcg ggccacccgg caggttatcc agaccgtagt cgatcatgtt
    40741 cagcgcggta tagacttcgt tgatacgcac tttcagacgc gaaataacgt cgcagccctg
    40801 ctcgctgtgg acttccattg gcagcaggcc ataaccaaca aacgggtgat cagcgcgggt
    40861 atcgcgagcg tgtccgctgg cgcggaccat cgggccaacg ttactgaaat cgcgggcaat
    40921 ttccgggtcc agacgaccaa tgccgacggt gcgctgttcc atgttcggtg tgctcagcag
    40981 cacatccacc agctcctgca cttcacgacg catctgttgc gccagctggc gggtctggat
    41041 catgtcatct ttcaacagat cgcgacgaat cccgccgatc aggttcaggc cgtaggtttt
    41101 acgcgcaccg gtgaggatct cggccatttt catggaggtt tcacgcacgc ggaagaattg
    41161 cataaagccg gagtcgaagc cggtaaagtg gcaggcgagg ccgaggttga gcagatgcga
    41221 gtgcaggcgt tccacctcca gcagaatggc gcggatcatc tgcgcacgtt ctggcacctg
    41281 aatacccatc gcgttttcca ccgacgtggt gtaggcggtg ctgtgggcga agccgcagat
    41341 cccgcacaca cggtcagaga ggaaggtcac ttcgttataa cccatgcggg tttccgccag
    41401 tttttccata ccgcgatgga catagaacaa gcggtagtct gcgtcgataa tgttttcgcc
    41461 atcgacgaac agacggaagt ggcccggttc gtcagaagtg acgtgcagcg gaccaatcgg
    41521 cacgacgttg tttttcttgt cgcccagttc gttgatgaac tcgtaggttt cagcatcggt
    41581 ggtcggtgcc ggacgctgac gataatccat gctgtcttta cgcagcggat aaagttcatc
    41641 cggccagtca tccggcagca ccagacggcg ttcatccggc agaccaaccg gaatcaaacc
    41701 gtacatatcg cgcacttcgc gctcgcccca caccgccgcc ggaacgcgcg gcgtcacgga
    41761 cggatactcc ggtttgttgg catcaacttc gacgcgaacc gttacccagc acttagtccc
    41821 cttctccatc gacagcacgt aataaacggc gtaatgacca ttcagtttgc gttcgtcgtt
    41881 accaaaaagc accgacagcc agcccccctg cttgtagtag agaaactcca ccacttccgg
    41941 cagatagttc acctttacgg tgacagtcag ctgatctttg gtctgccagg cgtggtccag
    42001 cacgacgccc ggaaatgcct cattcagcgc ggcgagataa tgttgaccta atttttcttc
    42061 agacatgctc aaactctctt taatcacgcc gccagcaagg agacgaacgc taaaaatgca
    42121 aagccaaacc cagcccaggt aatgcgcgga gtaatatcaa gacgcagacg ggccatgctg
    42181 ttttcgaaca gcgcgataac caggacgccg accaccagtt ttacgatcgc aatcaccagc
    42241 gccagcagca gtccaccggc ggtgaaggtt tccatttgtc cccacggaat aaacaccccg
    42301 acgaacatct gcaacaccac cagctgtttc aggctgatac cccatttcat gacgccaaag
    42361 ccgctgccgc tatactcaga gagcggacct tcctgcaact cctgctcggc ttccgccagg
    42421 tcgaacggca gtttgcccat ttcgataaaa gtggcgaacg cacaggcgca gagcgccagc
    42481 accagcggga tgctttggct cagcggccag tgataaacgg tgtcggtaat gttgctgatg
    42541 ttggtggaac cggcaacctg tgcggcaacc cacagaccaa gcagcaacat cggttcgacc
    42601 agcacgccaa gcatcgcttc acggctcgca ccgatagcgg taaacgggct accggtatcc
    42661 agaccggaaa tggcaaagaa gaaacgcgcg atggcgaaga gatacagtaa ggtgatcaaa
    42721 tcgcccagtt gcggcagcgg agaaccgacg gtcaccaccg gcagcgcagt agcgatagtc
    42781 agcatgacgc ccaccatcac atacggcgtc aggcggaaca cccagccaga ggcatccggg
    42841 ccaacgctct ggcggcccag cagtttgata atgtcgcgat actcctgcaa cacgcccggc
    42901 ccgcgacggt tatgcagacg ggcgcgcgcc acgcgggtaa taccggagag cagcggcgca
    42961 acggcaaata acaccagcgc ctgaattaac ggatataaaa cactcattct caggctcctc
    43021 gtgaaacaat aatcaccacc agtaccgcca gttcaaccag cgccatccgg cggaacagca
    43081 acgcactacc ttcgcactgc cagcccggca ccagcgacac cggattcagc catttgcgca
    43141 gtttcagcac tggcgcaaac gcctgtttaa ccggcatggc aaaaccgtga gcggtaatca
    43201 ccattgattt ttcatggtcg tagccgcaca cccaggccgc accgcgggaa cgtgacggca
    43261 ggcggtcgcc tttgcaaatc gccataatga tgaatggcag cagcgggcag gcaatcagca
    43321 gcaatgtgat cattggttga gaaacggtgg tgttagcagg ctccagaggc agaggtacgg
    43381 cagcagagag catcggcagc agccacggcg cagcaacacc gccaattacg cagcaaatcg
    43441 ccagtgccac tacgcttacg ctcatcagga gcggcgcaca ggtggcgttt tcggcttctt
    43501 tggtacgcgg cgcgccgagg aacgtgacgc catagacttt cgccatacac atcaccgcca
    43561 gcgcaccggt aattgccaga cccacagcga gcagcggccc cagcagacgg gcaacaaacg
    43621 cgccactatt gctcagtttg aaaaaggatt gatagataac ccattccccg gcaaacccgt
    43681 tcagcggcgg cagcgcagcc attgccatca acccgactaa catggcgatg gagataaccg
    43741 gcattttctt gccaatacca ccgagttttt cgatatcgcg atgaccggta cggaaccaga
    43801 cgctccccgc cccgaggaac agtacgcttt tgaacaggct atggttaagc agatggtaca
    43861 gaccaccgac caggccaaga gcaatcagcg ccggttgttc gagcgcgata cccgttacgc
    43921 cagcgcccag ccccagcagg ataatgccga tattttccag ggtgtggtaa gccagcaggc
    43981 gctggatgtt gtgctccatc agcgcataca gaccaccgac aaacgcggtg atcatgccga
    44041 gcaccagcag cacgatcccc caccacagcg gtgcattacc gcccagcagt gacagggtta
    44101 aaatgcccag caggccaatt ttcatgacta ccgtagaaaa caacgcggca gctggcgcag
    44161 aggcgttagc atgtgcctgc ggcacccagc cgtgcagcgg aataatcccg gcgagcaggc
    44221 caaagccaat cacaccgagc agccagatat cggaaccgag cggcagctgt tgcatacgca
    44281 tatccagcag gcgcagatcc agcgtgccat aacgctgcca cagcagccag caagcaatcg
    44341 ccagcagcag agtgccaaga cgccccagcg caaaccacag tttgccctct tttgtttcga
    44401 cgtaatactc gatggtgtgg ctgttaaagc catccgccag ggtgacgtaa atacgaaaat
    44461 gttcaaaaag gacgaaacag agttctttgt ccggcgcgca gctcatggcg tgatgcaggc
    44521 gcgctttcga taacgtgatc ccctgaacca gcgaattgca gtagatgtgc cactggtcct
    44581 gtaggcgacg atgccgctgt gcgatgtaat cggctttctc gcttatttcc caaatagtca
    44641 ttgtcaggtt acccgtttaa cagagatgcc agctttaagc attttctgtg ccaattttta
    44701 atttattgtt attaaaacga tttttaagct aaagatgaat ttcgtcgccg tgtcgacgtg
    44761 tcatttcgac atcatcgaca ttattcaccg cagggataat caacactggc acaattattg
    44821 cttgtagctg gcaatagtta atgggaggcg atatgcacga aataaccctc tgccaacggg
    44881 cactggaatt gatcgaacag caggccgcaa aacacggcgc aaaacgcgta actggggtct
    44941 ggctcaaaat tggcgcattt tcttgtgtcg aaaccagctc tcttgccttt tgttttgatc
    45001 tggtttgccg cggcagcgtg gcggaaggtt gtaaactgca cctcgaagaa caagaggtcg
    45061 aatgctggtg tgaaacatgc caacagtatg tgacgctatt gacccagcgc gtccgccgct
    45121 gtccacagtg tcatggtgac atgctacaga ttgtggcaga cgacggttta cagattcggc
    45181 ggatagaaat agaccaggag tgagcgatgt gtacaacatg cggttgcggt gaaggcaacc
    45241 tgtatatcga gggtgatgaa cataaccctc attccgcgtt tcgtagcgcg ccatttgccc
    45301 cggcggcacg cccgaagatg aaaatcaccg gcattaaagc gcctgaattt acccccagcc
    45361 agactgaaga aggcgacctg cattacggtc atggcgaagc gggcactcac gcaccgggca
    45421 tgagccagcg tcggatgctg gaagtcgaaa ttgacgtgct ggacaaaaac aaccgtctgg
    45481 ctgaacgcaa ccgcgcgcgc tttgctgccc gcaagcaact ggtgctcaac ctggtttcca
    45541 gcccaggttc cggtaaaacc accctgctga cggaaaccct aatgcgcctg aaagacagcg
    45601 ttccgtgcgc ggttattgaa ggtgaccagc aaaccgtgaa cgatgccgca cgcattcgcg
    45661 ctaccggcac accagcgatt caggtgaaca caggtaaagg ctgccatctt gacgcacaga
    45721 tgattgccga cgccgcaccg cgtctgccac tggacgataa cggtattctg tttatcgaaa
    45781 acgttggcaa cctcgtatgc ccggccagct tcgatctcgg tgaaaaacac aaagtggcgg
    45841 tgctttccgt taccgaaggt gaagacaaac cgctgaaata tccgcatatg tttgccgccg
    45901 cctcgctgat gctgctcaac aaagttgacc tgttgccgta tctcaacttt gacgttgaga
    45961 agtgcatcgc ctgcgcccgc gaagtcaatc cagaaattga aatcatcctt atttccgcca
    46021 ccagcggtga agggatggac cagtggctga actggctgga gacacagcga tgtgcatagg
    46081 cgttcccggc cagatccgca ccattgacgg caaccaggca aaagtcgacg tctgcggcat
    46141 tcagcgcgat gtcgatttaa cgttagtcgg cagctgcgat gaaaacggtc agccgcgcgt
    46201 gggccagtgg gtactggtac acgttggctt tgccatgagc gtaattactg aagccgaagc
    46261 acgcgacact ctcgacgcct tacaaaacat gtttgacgtt gagccggatg tcggcgcgct
    46321 gttgtatggc gaggaaaaat aatgcgtttt gttgatgaat atcgcgcgcc ggaacaggtg
    46381 atgcagttaa ttgagcatct gcgcgaacgt gcttcacatc tctcttacac cgccgaacgc
    46441 cctctgcgga ttatggaagt gtgcggtggt catacccacg ctatttttaa attcggcctc
    46501 gaccagttac tgcctgaaaa cgttgagttt atccacggtc cgggttgccc tgtgtgcgta
    46561 ctgccgatgg gtagaatcga cacctgcgtg gagattgcca gccatccgga agtcatcttc
    46621 tgtacctttg gcgatgccat gcgcgtacca gggaaacagg gatcgctgtt gcaggcaaaa
    46681 gcacgcggtg ccgatgtgcg catcgtttac tcgccgatgg atgcgttgaa actggcgcag
    46741 gagaatccaa cccgcaaagt ggtgttcttc ggcttaggtt ttgaaaccac catgccgacc
    46801 accgccatca ctctgcaaca ggcgaaagcg cgtgatgtgc agaattttta cttcttctgc
    46861 cagcacatta cgcttatccc gacgctgcgc agtttgctgg aacagccgga taacggtatc
    46921 gacgcgttcc tcgcgccggg ccacgttagt atggttatcg gcactgatgc ctataatttt
    46981 atcgccagcg attttcatcg tccgctggtg gtcgctggtt tcgaacccct tgatctactg
    47041 caaggcgtgg tgatgctggt ggagcagaaa atagcggccc acagcaaggt agagaatcag
    47101 tatcgtcggg tggtaccgga tgccggtaac ctgctggcgc aacaggcgat tgccgatgtg
    47161 ttctgtgtca acggcgacag cgaatggcgc ggcttaggcg tgattgaatc ttctggcgtg
    47221 cacctgacgc cggattatca acgattcgat gccgaagcac atttccgccc ggcaccgcag
    47281 caggtctgcg atgacccgcg cgcgcgttgt ggtgaggtat taacgggcaa atgtaagccg
    47341 catcaatgcc cgctgtttgg taacacctgt aatcctcaaa ccgcatttgg tgcactgatg
    47401 gtctcctccg aaggagcgtg cgccgcgtgg tatcagtatc gtcagcagga gagtgaagcg
    47461 tgaataatat ccaactcgcc cacggcagcg gtggccaggc gatgcagcaa ttaatcaaca
    47521 gcctgtttat ggaagccttt gccaacccgt ggctggcaga gcaggaagac caggcacgtc
    47581 ttgatctggc gcagctggta gcagaaggcg atcgtctggc gttctccacc gacagttacg
    47641 tcattgaccc gctgttcttt cctggcggta atatcggcaa gctggcgatt tgcggcaccg
    47701 cgaatgacgt tgcggtcagt ggcgctattc cgtgctatct ctcctgtggc tttatcctcg
    47761 aagaaggatt gccgatggag acactgaaag ccgtagtgac cagcatggca gaaaccgccc
    47821 gcacggcagg cattgccatc gttactggcg atactaaagt ggtgcagcgc ggcgcggcag
    47881 ataaactgtt tatcaacacc gctggcatgg gcgcaattcc ggcgaatatt cactggggcg
    47941 cacagacgct aaccgcaggc gatgtattgc tggttagcgg tacactcggc gaccacgggg
    48001 cgactatcct taacctgcgt gaacaactgg ggctggatgg tgaactggtc agcgactgcg
    48061 cggtgctgac gccgcttatt cagacgctgc gtgacattcc cggcgtgaaa gcgctgcgtg
    48121 atgccacccg tggtggtgta aacgcggtgg ttcatgagtt cgcggcagcc tgcggttgtg
    48181 gtattgaaat ttctgaatca gcactgccgg ttaaacctgc tgtgcgcggc gtttgcgaac
    48241 tgctgggact ggacgccctt aactttgcca acgaaggcaa actagtaata gctgttgaac
    48301 gcaacgcagc agagcaagtg ctggcagcgt tacattccca tccactgggg aaagacgcgg
    48361 cgctaattgg tgaagtggtg gaacgtaaag gtgttcgtct tgccggtctg tatggtgtga
    48421 aacgaaccct cgatttacca cacgccgaac cgcttccgcg tatatgctaa taaaattcta
    48481 aatctcctat agttagtcaa tgaccttttg caccgctttg cggtgctttc ctggaagaac
    48541 aaaatgtcat atacaccgat gagtgatctc ggacagcaag ggttgttcga catcactcgg
    48601 acactattgc agcagcccga tctggcctcg ctgtgtgagg ctctttcgca actggtaaag
    48661 cgttctgcgc tcgccgacaa cgcggctatt gtgttgtggc aagcgcagac tcaacgtgcg
    48721 tcttattacg catcgcgtga aaaagacacc cccattaaat atgaagacga aactgttctg
    48781 gcacacggtc cggtacgccg cattttgtcg cgccctgata cgctgcattg cagttacgaa
    48841 gaattttgtg aaacctggcc gcagctggtc gctggtgggc tataccccaa atttggtcac
    48901 tattgcctga tgccactggc ggcggaaggg catatttttg gtggctgtga atttattcgt
    48961 tatgacgatc gtccctggag cgaaaaagag ttcaatcgtc tgcaaacatt tacgcagatc
    49021 gtttctgtcg tcaccgaaca aatccagagc cgcgtcgtca acaatgtcga ctatgagttg
    49081 ttatgccggg agcgcgataa cttccgcatc ctggttgcca ttaccaacgc ggtgctttcc
    49141 cgcctggata tggacgaact ggtcagcgaa gtcgccaaag aaatccatta ctatttcgac
    49201 attgacgata tcagtatcgt cttacgcagc caccgtaaaa acaaactcaa catctactcc
    49261 actcactatc ttgataaaca acatcccgcc cacgaacaga gcgaagtcga tgaagccgga
    49321 accctcaccg aacgcgtgtt caaaagtaaa gagatgctgc tgatcaatct ccacgagcgg
    49381 gacgatttag ccccctatga acgcatgttg ttcgacacct ggggcaacca gattcaaacc
    49441 ttgtgcctgt taccgctgat gtctggcgac accatgctgg gcgtgctgaa actggcgcaa
    49501 tgcgaagaga aagtgtttac cactaccaat ctgaatttgc tgcgccagat tgccgaacgt
    49561 gtggcaatcg ctgtcgataa cgccctcgcc tatcaggaaa tccatcgtct gaaagaacgg
    49621 ctggttgatg aaaacctcgc cctgaccgag cagctcaaca atgttgatag tgaatttggc
    49681 gagattattg gccgcagcga agccatgtac agcgtgctta aacaagttga aatggtggcg
    49741 caaagtgaca gtaccgtgct gatcctcggt gaaactggca cgggtaaaga gctgattgcc
    49801 cgcgcgatcc ataatctcag tgggcgtaat aatcgccgca tggtcaaaat gaactgcgcg
    49861 gcgatgcctg ccggattgct ggaaagcgat ctgtttggtc atgagcgtgg ggcttttacc
    49921 ggtgccagcg cccagcgcat tggtcgtttt gaactggcgg ataaaagctc cctgttcctc
    49981 gacgaagtgg gcgatatgcc actggagtta cagccgaagt tgctgcgtgt attgcaggaa
    50041 caggagtttg aacgtctcgg cagcaacaaa atcattcaga cggacgtacg tttaattgcc
    50101 gcgactaacc gcgatctgaa aaaaatggtc gccgaccgag agttccgtag cgatctctat
    50161 taccgcctga acgtattccc gattcacctg ccgccactac gcgagcgtcc ggaagatatt
    50221 ccgctgctgg cgaaagcctt taccttcaaa attgcccgtc gtctggggcg caatatcgac
    50281 agcattccag ccgagacgct gcgcaccttg agcaacatgg agtggccggg taacgtacgc
    50341 gaactggaaa acgtcattga gcgcgcagta ttgctaacac gcggcaacgt gctgcagctg
    50401 tcattgccag atattgcttt accggagcct gaaacgccgc ctgccgcaac ggttgtcgct
    50461 caggagggcg aagatgaata tcagttgatt gttcgcgtgc tgaaagaaac caacggcgtg
    50521 gttgccgggc ctaaaggcgc tgcgcaacgt ctggggctga aacgcacgac cctgctgtca
    50581 cggatgaagc ggctgggaat tgataaatcg gcattgattt aactgcaaat tgccggacag
    50641 atctgcctgt ccggcatact attcacgagg ttttttcgga cgatattttt ccggcagttc
    50701 tggcaccgga cgcttgtcat cgatgagatg acgcacggtt aagatcggat gacgccacag
    50761 cattctcggc ccggcccaac gcataatctg tttcatctct tcacgctttg caggctggta
    50821 acagtgcacc ggacactgct tacaggctgg tttctcttcg ccgaacacac atttatccag
    50881 ccgcttttgc gcgtaaacaa acaacgcctc gtaatgctcc ggctccgctg acgcctgcgg
    50941 gcatttcgct tgataaagat cgatcatttt tttaatcgtc agtttttcac gagagatacg
    51001 cttgccggac atgctgcctc catactctta aggtgtattt atattacaac ttaatttgaa
    51061 aggggactat ggctctgaag gaggaggttt attcaaccga cgcaattttg cgtacttgct
    51121 tcataagcat cacgcaaaag ctgcaaaaca gcatctttcc cggaaccagc atcaagaact
    51181 cgccgttcgc ttcttcccct gaaatgatta actccggtat catgtgcgcc ttatgtgatt
    51241 acaacgaaaa taaaaaccat cacaccccat ttaatatcag ggaaccggac ataaccccat
    51301 gagtgcaata gaaaatttcg acgcccatac gcccatgatg cagcagtatc tcaggctgaa
    51361 agcccagcat cccgagatcc tgctgtttta ccggatgggt gatttttatg aactgtttta
    51421 tgacgacgca aaacgcgcgt cgcaactgct ggatatttca ctgaccaaac gcggtgcttc
    51481 ggcgggagag ccgatcccga tggcggggat tccctaccat gcggtggaaa actatctcgc
    51541 caaactggtg aatcagggag agtccgttgc catctgcgaa caaattggcg atccggcgac
    51601 cagcaaaggt ccggttgagc gcaaagttgt gcgtatcgtt acgccaggca ccatcagcga
    51661 tgaagccctg ttacaggagc gtcaggacaa cctgctggcg gctatctggc aggacagcaa
    51721 aggtttcggc tacgcgacgc tggatatcag ctccgggcgt tttcgcctga gcgaaccggc
    51781 cgaccgcgaa acgatggcgg cagagctgca acgcactaat ccggcggaac tgctgtatgc
    51841 agaagatttc gccgagatgt cgctgattga aggccgtcgc ggcctgcgcc gtcgcccgct
    51901 gtgggagttt gaaatcgaca ccgcgcgcca gcagttgaat ctgcaatttg gcacccgcga
    51961 tctggtcggt tttggcgtcg agaacgcgcc gcgcggactt tgtgctgccg gttgtctgtt
    52021 gcagtatgcg aaagataccc aacgcacgac cctgccgcat attcgttcta tcaccatgga
    52081 acgtgagcag gacagcatca ttatggatgc cgcgacacgt cgtaacctgg aaattactca
    52141 gaacctggcg ggcggtgcgg aaaatacgct ggcttctgtg ctcgactgca ccgtcacgcc
    52201 gatgggtagt cgtatgctga aacgctggct gcatatgcca gtgcgcgata cccgcgtgtt
    52261 gcttgagcgc cagcaaacta ttggcgcatt gcaggatttc accgccgggc tacagccggt
    52321 actgcgtcag gtcggcgacc ttgaacgtat tctggcacgt ctggctttac gaactgctcg
    52381 cccacgcgat ctggcccgta tgcgccacgc tttccagcaa ctgccggagc tgcgtgcaca
    52441 gttagaaact gtcgatagtg caccggtaca ggcgctacgt gagaagatgg gcgagtttgc
    52501 cgagctgcgc gatctgctgg agcgagcaat catcgacaca ccgccggtgc tggtacgcga
    52561 cggtggtgtt atcgcatcgg gctataacga agagctggat gagtggcgcg cgctggctga
    52621 cggcgcgacc gattatctgg agcgtctgga agtccgcgag cgtgaacgta ccggcctgga
    52681 cacgctgaaa gttggcttta atgcggtgca cggctactac attcaaatca gccgtgggca
    52741 aagccatctg gcacccatca actacatgcg tcgccagacg ctgaaaaacg ccgagcgcta
    52801 catcattcca gagctaaaag agtacgaaga taaagttctc acctcaaaag gcaaagcact
    52861 ggcactggaa aaacagcttt atgaagagct gttcgacctg ctgttgccgc atctggaagc
    52921 gttgcaacag agcgcgagcg cgctggcgga actcgacgtg ctggttaacc tggcggaacg
    52981 ggcctatacc ctgaactaca cctgcccgac cttcattgat aaaccgggca ttcgcattac
    53041 cgaaggtcgc catccggtag ttgaacaagt actgaatgag ccatttatcg ctaacccgct
    53101 gaatctgtcg ccgcagcgcc gtatgttgat tattaccggc ccgaacatgg gcggtaaaag
    53161 tacctatatg cgccagaccg cactgattgc gctgatggcc tacattggca gctatgtacc
    53221 ggcacaaaaa gtcgagattg gacctatcga tcgcatcttt acccgcgtag gcgcggcaga
    53281 tgacctggct tccgggcgct caacctttat ggtggagatg actgaaaccg ccaatatttt
    53341 acataacgcc accgaataca gtctggtgtt aatggatgag atcgggcgtg gaacgtccac
    53401 ctacgatggt ctgtcgctgg cgtgggcgtg cgcagaaaat ctggcgaata agattaaggc
    53461 attgacgctg tttgccaccc actatttcga gctgacccag ctaccggaga aaatggaaga
    53521 cgtcgccaac gtgcatctcg atgcgctgga gcacggagac accattgcct ttatgcatag
    53581 cgtgcaggat ggcgcggcga gcaaaagcta cggcctggcg gttgcagctc tggcaggcgt
    53641 gccaaaagag gtgattaagc gcgcacggca aaaactgcgt gagctggaaa gcatttcgcc
    53701 gaacgccgcc gctacgcaag tggatggtac gcaaatgtct ttgctgtcag taccggaaga
    53761 aacctcgcca gcggtcgaag ctctggaaaa cctggacccg gattcactga ctccgcgtca
    53821 ggcgctggaa tggatttatc gcttgaagag cctggtgtaa taacaattcc cgatagtctt
    53881 ttgctatcgg gaatattaac gacaactgac gaataaaata aaaaccccct gtataatagg
    53941 aaagcttatt ttacagggta aaaccatgcc atctacacgc tatcaaaaaa ttaatgccca
    54001 tcactatcgc catatatggg tcgttggtga tatacatggt gaatatcaat tattacaatc
    54061 ccgcttacat caactctctt tttgccctga aaccgactta cttatttctg tcggcgataa
    54121 tattgatcgt gggccggaga gtcttgacgt cctgcgcctg ctaaaccagc cctggtttat
    54181 ctccgttaaa ggcaaccacg aagcaatgga gctggatgcg ttcgcgaccg gcgatggcaa
    54241 tatgtggctt gccagcggtg gtgactggtt tttcgattta aatgattcag agcaacaaga
    54301 ggcaatagat ctgttgctga aattccatca ccttccacat attattgaaa tcactaacga
    54361 cataataaaa tatgtcatcg cacatgcaga ttatccgggt gatgaatatc tctttggcaa
    54421 agaaatagcg gagagcgaat tactctggcc tgtttatcgt gtgcagaaat cgcttaatgg
    54481 cgagttacaa caaataaacg gcgctgatta ttttatattt ggacatatga tgtttgataa
    54541 cattcagacg ttcgctaacc agatttatat tgataccgga tcgccgaaaa gtgggcggct
    54601 gtcattttat aaaataaggt agtctcatgc ttcttctgtg aagcatgagt aaccagatgt
    54661 tattgcaggc cattattcat ttttcgctac cagcaaagag agatcctgct tcgccagcgc
    54721 gcgactggca ctctccggca aaccgtcgtc tgtaataatc tgatcaaact cgcttaatgg
    54781 taacgccagc catgtcgcca cctgaccata tttcgtcgca tcacagacca aaactcgctg
    54841 gcggctggca ctagcaatcg cccgtttcac cgtgacttta tcttccgctg gcgtagaaat
    54901 cccccgcaca ctccatgacg atgcagaaat aaaagcctga tcaatcatca ggctgcgcag
    54961 catggtcgca gcggcttccc cgacacagga acggttttcc cgacacactg caccgccagt
    55021 gtgaataatt gtgcaattac tgttgtcgag caagtagttc gcaataacga aatcgtttgt
    55081 gaccacagtc agtgactcca tgtgaatcag atgctgtgct atcgctaacg tggtcgttcc
    55141 tgcatccaga tagatacaac ttcccggctg aacaagactt gccgccagct tgccaatagc
    55201 cgctttttgc gtcattgcta gcgcagtttt tacctgatga gaaggttcat gcgccacgcg
    55261 tcccggagac tggacgcctc cggacaccag cacaacggct ccctgctgct ccagtttttg
    55321 taaatcccga cgaatggtca tatgtgatac attcattctg tccgttagtt cagcaatact
    55381 gacaatgcct ttttcagcta ccatctcaag gatgatttgg cgacgctcta cgggtatcaa
    55441 cttttgctcc ttcctttgtc ctgctgacat tctacgctat ttgcctgcga aacgtgcgcg
    55501 gcgcaactaa cgcttagttc acataaaata acacacaatg ttaatttatg tgaatcggct
    55561 caccatatcg ttatcttcca gcgcttatat tcacaatatc aaacaaaata tcacttaaat
    55621 taacaaggag agcagatgaa aacgggatct gagtttcatg tcggtatcgt tggcttaggg
    55681 tcaatgggaa tgggagcagc actgtcatgt gtccgcgcag gtctttctac ctggggcgca
    55741 gacctgaaca gcaatgcctg cgctacgttg aaagaggcag gtgcttgcgg ggtttctgat
    55801 aacgccgcga cgtttgccga aaaactggac gctctgctgg tgctggtggt caatgcggcc
    55861 caggttaaac aggtgctgtt tggtgaaaca ggcgttgcac aacatctgaa acccggtacg
    55921 gcagtaatgg tttcttccac tatcgctagt gctgatgcgc aagaaattgc taccgctctg
    55981 gctggattcg atctggaaat gctggatgcg ccagtttctg gtgatgcagt aaaagccgct
    56041 aacggtgaaa tgactgtcat ggcctccggt agcgatattg cctttgaacg actggcaccc
    56101 gtgctggaag ccgttgccgg aaaagtttat cgcataggtg cagaaccggg actaggttcg
    56161 accgtaaaaa ttattcacca gttgttagcg ggcgtacata ttgctgccgg agccgaagcg
    56221 atggcacttg cagcccgtgc ggggatcccg ctggatgtga tgtatgacgt cgtgaccaat
    56281 gccgccggaa attcctggat gttcgaaaac cggatgcgtc atgtggtgga tggcgattac
    56341 accccgcatt cagccgtcga tatttttgtt aaggatcttg gtctggttgc cgatacagcc
    56401 aaagccctgc acttcccgct gccattggcc tcaacagcat tgaatatgtt caccagcgcc
    56461 agtaacgcag gttacgggaa agaagacgat agcgcagtta tcaagatttt ctctggcatc
    56521 actctaccgg gagcgaaatc atgatcaaga ttggcgttat cgccgatgat tttaccggcg
    56581 cgacggatat cgccagtttt ctggtggaaa acggtctacc aacggtacaa attaacggtg
    56641 ttccaacagg taaaatgccg gaagcaatcg acgcactggt gatcagcctg aaaacgcgct
    56701 cctgtccggt ggttgaagcc acacagcaat cgctggcggc tctgagctgg ttgcaacagc
    56761 aaggttgcaa acagatctat ttcaaatact gctctacttt cgacagtacg gcgaaaggta
    56821 atatcggccc ggttaccgat gcattaatgg atgctctcga cacgccgttt acggtcttct
    56881 ctccggccct gtcggtcaac ggacgtacgg tttatcaggg gtatttgttc gtaatgaatc
    56941 aactgctggc cgaatccggg atgcgccatc acccggtaaa tcccatgacc gacagctatc
    57001 ttccccgtct ggttgaagcg caatccacag ggcgctgcgg cgtcgtttcg gcacatgttt
    57061 tcgaacaagg tgtggatgcc gttcgtcaag agcaggctcg cttacagcaa gagggctacc
    57121 gctacgcggt gcttgatgcg ctgaccgaac accatctgga aattcaggga gaagccttgc
    57181 gcgatgcccc actggtaacg ggcggttctg gtctggcgat tggcctggcc cggcagtggg
    57241 cgcaagaaaa cggtaaccag gctcgcgaag cagggcatcc gctcgctggg cgcggcgtag
    57301 tgctctccgg ttcatgctct caaatgacca accgccaggt ggcacattac cgtcaaattg
    57361 caccagcccg tgaagttgat gtggcacgct gcctctcaac cgaaactctg gccgcttatg
    57421 cacacgaact ggcagagtgg gttctgggcc aggaaagtgt acttgctcca ctggtttttg
    57481 ccaccgccag cactgacgca ttggcagcaa ttcaacagca atacggtgca caaaaagcca
    57541 gtcaggcagt agaaactctg ttttctcaac tagcggcgcg gttagcagcg gaaggcgtga
    57601 cacgctttat tgtcgcaggc ggtgagacct ccggcgtagt cacacagagc ctgggcataa
    57661 aagggtttca tattggccca accatttccc ccggcgtgcc gtgggtaaac gcactggata
    57721 agcctgtctc actcgccctt aaatctggca acttcggtga tgaagccttt tttcacgagc
    57781 ccaaagagag tttttatcat gagcgatttc gcaaaagtag agcagtcttt gcgagaggag
    57841 atgacgcgga ttgccagttc attctttcag cgcggctatg caaccggttc ggctggcaat
    57901 ctgtcgctgc ttttacctga cgggaattta ctggcgacac cgacaggttc atgcctgggc
    57961 aatctcgatc cgcagcggct ttccaaagtc gccgcggatg gcgaatggtt aagtggtgac
    58021 aaaccctcga aagaggtgct ctttcatctg gcgctgtatc gcaacaatcc gcgctgtaaa
    58081 gcggtggtgc atttgcacag cacatggtcg acggcgcttt cctgcctgca agggctggac
    58141 agcagcaacg ttattcgtcc gttcacacca tacgtggtga tgcggatggg aaatgtcccg
    58201 ctggtgccct attaccgacc gggcgataaa cgcatcgcac aggatctggc ggaactggca
    58261 gcagacaatc aggctttttt actggcaaat catggcccag tggtttgcgg tgaaagcctg
    58321 caagaagccg ccaacaatat ggaagagctg gaggaaacgg caaagctgat ttttattctc
    58381 ggtgaccgcc cgatccgtat ctgaccgcag gtgaaattgc ggaattaagg agttaatgca
    58441 atgcctcgtt ttgcagctaa tttatccatg atgttcaccg aagtgccttt tattgaacgc
    58501 ttcgccgcag cgcgaaaagc cgggttcgat gctatggaat ttctgtttcc ctatgactac
    58561 tccaccctgc aaatccaaaa gcaactggag caaaaccatc tgacactggc gctgttcaat
    58621 accgctcccg gagatattaa tgcgggggaa tggggattat ccgcccttcc cggacgtgag
    58681 cacgaagcac acgcagacat cgacctggca ctggaatatg cattggcgct caattgtgaa
    58741 caagtccatg tgatggcagg cgtcgtgccc gctggcgaag atgctgaacg gtaccgggca
    58801 gtatttatcg ataatctccg ctacgctgcc gaccgctttg tgccacacgg caagcgaata
    58861 ttagttgaag cactcagccc cgacgttaag cctcattatc tcttctccag ccagtatcag
    58921 gcactggcta ttgttgaaga ggttgcgcga gataacgtgt ttattcaact agatactttt
    58981 catgcgcaaa aagtagatgg caacctgacg catttaatcc gcgactacgc tgggaaatat
    59041 gcgcacgtac aaattgccgg actacctgat cgacatgaac cggacgatgg agaaatcaac
    59101 tatccgtggc tgttccgcct gttcgatgag gtgggatatc agggctggat cggttgtgaa
    59161 tataaacctc gtggcctcac cgaagaaggg cttggctggt ttgacgcctg gcgctaattc
    59221 gttaaatccc taattacaac gtacccatac atccccccat ctacggatgg ggtaggttaa
    59281 ctataacttt cagacagggt ttcccatgtc cacaattaca ttgttatgca ttgcgttagc
    59341 tggcgtaatc atgctgttgc tgctggtcat caaggcaaag gtacaaccat tcgttgctct
    59401 gctcctcgtc agcctgttag tcgcacttgc ggcgggtata ccggcgggcg aagtgggtaa
    59461 agtgatgatc gccgggatgg gcggtgtgct tggttccgtc actattatta ttggtctggg
    59521 cgctatgctg gggcgtatga tcgaacactc tggtggtgca gagtcactgg ctaattattt
    59581 cagtcgcaag ttaggtgaca aacgaactat cgctgcgctg actctggcag cgttcttcct
    59641 cggtattccc gtcttctttg atgtcagctt tattattctt gcgccaatca tttacggttt
    59701 tgccaaggtt gccaaaatat cgccactcaa atttggcctg cctgtcgctg gaatcatgct
    59761 aactgttcat gtggcagtac cgccgcatcc aggccctgtc gccacagcgg ggttactcca
    59821 cgcagacatc ggctggctaa ccatcatcgg tattgcgatt tctattcccg tagggattgt
    59881 tggctacttt gcagcgaaaa taatcaataa gcgccaatat gcgatgtcag tagaagtact
    59941 ggaacagatg caactggctc cggccagtga ggaaggcgcg acaaaattaa gcgataaaat
    60001 aaatccaccg ggcgtcgcgc tggtcacctc gctaattgtt attcctatcg cgattatcat
    60061 gacgggtacg gtttccgcaa cactgatgcc gccttcgcat cccctgcttg gtacgctaca
    60121 gctgatcggc tcaccaatgg tagctctaat gattgcgctg gtgctggcat tctggttatt
    60181 ggctttacgt cgcggctgga gcttacaaca caccagcgac attatgggct cagcccttcc
    60241 cactgcggcg gtagtgattt tggttactgg tgctggaggg gtatttggca aagtgctggt
    60301 ggaatcgggc gtcggcaaag cccttgccaa tatgctacaa atgattgacc tgcctctgtt
    60361 accagccgca tttattattt cactggctct gcgtgcatcg caggggtcag caaccgtagc
    60421 aatcctgaca accggcgggt tactctcaga agcggtgatg ggattgaatc cgattcagtg
    60481 cgtattggtg acgctggcag cctgctttgg tgggcttggc gcgtcacata ttaatgactc
    60541 agggttctgg attgtgacca aatatctggg gttgtcggta gcagacggtc tgaaaacctg
    60601 gacagtgtta acgaccattc tcggttttac cggattctta attacctggt gcgtatgggc
    60661 ggtaatttga ccttaataaa aaggtccgat gggcatcgga ccttttattg tgcacagaaa
    60721 aggccagcct cgcttgagac tggcctttct gacagatgct tacttactcg cggaacagcg
    60781 cttcgatatt cagcccctgc gtttgcagga tttcacgcaa acggcgcagg ccttcaacct
    60841 gaatctggcg aacacgttca cgggtgaggc caatttcacg acctacatct tccagtgttg
    60901 ccgcttcgta ccccagcaaa ccgaatcgac gtgccagcac ttcacgctgt ttggcgttca
    60961 gctcgaacag ccatttgacg atgctctgct tcatatcgtc atcttgcgtg gtatcttccg
    61021 gaccgttctc tttttcatcg gccaggatgt ccagcaacgc tttttcggaa tcaccaccca
    61081 gcggggtgtc taccgaggta atgcgctcgt taagacgaag catacggctg acgtcatcaa
    61141 ctggcttatc cagttgctct gcgatctctt ccgcacttgg ttcatggtcc agcttatggg
    61201 acaactcacg tgcggttcgc aggtaaacgt tcagctcctt tacgatgtga atcggcaaac
    61261 gaatagtacg ggtttggttc ataatcgccc gttcaatcgt ctggcgaatc caccaggttg
    61321 cgtatgttga gaagcggaaa ccacgttccg ggtcaaactt ctctaccgcg cggatcagcc
    61381 ccaggttgcc ctcttcgata aggtccagca acgccagacc acgattgcca taacggcggg
    61441 caatttttac caccagacgc aagttactct cgatcatccg gcggcgagag gcgacatctc
    61501 cacgcagtgc gcgacgcgca aaataaactt cttcttcggc cgttaacagt ggtgaataac
    61561 caatctcacc aaggtaaagc tgagtcgcgt ccaacactcg ctgtgtgact ccctgcgata
    61621 acagttcctc ttcggccaaa tcgttatcac tgggttcctc ttctactaag gccttttcgt
    61681 caaaaacctc aactccgttc tcatcaaatt ccgcatcttc atttaaatca tgaactttca
    61741 gcgtattctg actcataagg tggctcctac ccgtgatccc ttgacggaac attcaagcaa
    61801 aagcctggtt ccgccgattt atcgctgcgg caaataacgc agcgggttta cggatttccc
    61861 cttgtaacga atttcaaaat gcaagcgtgt tgaactggtt ccggtgctac ccatggttgc
    61921 tattttttgc cccgccttca cttcttgttg ttcccggacc agcattgtgt cgttatgggc
    61981 gtaggcactc aggtaatcat cattatgttt gatgataatc agattaccgt agccgcgcag
    62041 cgcgttaccg gcataaacaa cgcggccatc tgcggtcgcg ataattgcct gtcctttgct
    62101 gcctgcgata tcaatcccct tgttgccccc ctcagaagcg ccaaaggttt cgatcacttt
    62161 gccctcagtc ggccagcgcc aggtggagat aggcgtactg gttgatgtac tgctgacagt
    62221 tggctcggtt gtgcttgctg ttggtaccgt tacaggcgct gtgaccgtgg tcgcagctgg
    62281 cttgttgttc ggcaacattt tgttagcact ctgttcaccc gaagattcag aatacgtaat
    62341 tgtcggttgc gacgcaacag caacggtgga attttgtgca gtcttgatca caactccttg
    62401 ctctgctgcg tcggcctggg taatggcatt tccgccagtg attggcgtac cggaagcatt
    62461 acccacctgc aaggtctgac caacgttcag cgcgtatggt gcctgaatat tgttgcgctg
    62521 agcaaggtca cggaaatcgt tgccagtaat ccaggcgata tagaaaagtg tgtcgccttt
    62581 tttcacggta taggtactgc cgctataact gcctttcgga atgttcccat actgacggtt
    62641 atagacgatg cgtccgtttt ccatctgtac cggctgctga gctactggct gcactggctg
    62701 gatttgcggt tgctgggctg tagacgtcgt ccccattttc ggcggcggcg taatcaacat
    62761 accagaattg gtatttgcag gcgcattgcc attaacggag ctgaccggtg ccggtggatt
    62821 tgaagtgtca gaacagcctg ccagccatag cgaaaccagt gacaaagccg caatgcggcg
    62881 aacggtgaat tttgggcttc ccgcgctcat ttatccccca ggaaaaattg gttaataacc
    62941 agtgacataa ttaccgtgca aggcacccta ctgaacactg gaaaagatgt tcacgatacg
    63001 ctgacctgcg gcaaaataac caggaaaaat ccaggtattt cctcacgttt taagccagct
    63061 cccccttcac taaagggaca aagcgcacgg cctccacggt atcgataata aattcgcctc
    63121 cccgacgacg cacccgtttc aaatactggt gctcctcccc tacgggtaag acgagaatcc
    63181 cgccttcgtc cagctgcgtc attagcgcag ttggaatttc cggcggtgcc gccgtaacaa
    63241 tgatagcgtc aaacggcgcg cgtgcctgcc aaccttgcca tccatcgcca tgacgggttg
    63301 aaacattatg taaatcaaga tttttcaggc ggcgacgcgc ctgccactgc aaacctttaa
    63361 tccgttcgac cgagcaaaca tgctggacaa gatgcgccag gattgccgtt tgatatcccg
    63421 aaccggtgcc aatttccagc acccgcgact gcggcgtcag ctcgagtaat tcggtcattc
    63481 gcgccaccat atacggctgc gaaattgtct gcccctgacc tatcggcaag gcgatattgt
    63541 cccaggcttt ttgttcaaac gcttcatcaa cgaatttttc acgcggcacg gcagcaagtg
    63601 cattcagcac ctgctcatcc tgaatacctt gcgcacgtaa ttgatccaga agtgcttgta
    63661 cgcgtctgct taccattgcg tgccaactcc cacgctgttt aaccagtctg aaaccacatc
    63721 ttgcgcgcta tgcgcagtta aatccacatg cagcggcgtg atggagacat agccctcatc
    63781 taccgcagca aaatcggtcc ccggaccggc atcacattta ccgcccggcg ggccaatcca
    63841 gtacagcgta ttgccgcgcg gatcttgctg cgggatcacc tgatctgccg gatgtcgtgt
    63901 accgcagcgc gtcacgcgaa tacctttgat ttgatccaag ggtaaatccg gaacgttaat
    63961 attaagaata cgtccggtgc gcagcggctc tttacacagt gcgcgcaaaa ttgaacaggt
    64021 taccgccgcg gcagtgtcgt aatgtttatg cccgtcaagc gagacggcca gcgccggaaa
    64081 acctaaatga cggccttcca tcgcggcggc taccgtaccg gaataaataa cgtcatcccc
    64141 cagattcggc ccggcgttaa tgccggacac aacaatgtcc gggcgcggac gcatcagagc
    64201 attcacgcca agatagacgc aatcggtcgg ggttcccatt tgcacagcaa tatcaccatt
    64261 ttcaaaggta aacgtgcgca gggaggattc cagtgtcaga gaatttgaag cgccgctgcg
    64321 gttacgatcg ggggcgacca cctgaacgtc agcaaactca cgcaaggctt tcgccagcgt
    64381 ttgtataccg ggtgcatgta ccccgtcatc attactcagc aatatgcgca taatcacctg
    64441 ttgtgttgat aagttccctg acaacgctgg ttgcaaaact acccgccgga agccagaaac
    64501 ggatctctac ggtgacgtca tcccaccaat tccagcttaa ttgttgcgga tacagcagca
    64561 tcgctctgcg cgcggcttca actttttcgc gcaccagtaa agcttgtaat tcagtttctg
    64621 cggcgacagc tgcttgttcg aatgccagcg ctttacgctg agttccccat tcgccactgc
    64681 ccggcaatgc ggcggttatc atcagctctt tatcgttgac gcgatgctgt aattccgcca
    64741 gttcttcggt ggttgctaca aaccagctac cacgtccggc taattgtagc gcatcgccgt
    64801 caacaacttg attaacgtct gcttttttga ggcgctcagc aacaatctga ttaaacaacg
    64861 cactgcgggc tgccgacaac caaaaactcc gtttattgcg atcgcgcacc ggagtattgg
    64921 tttgcgccca gcgcagcgcg ccctgcaagt tgctaccgcc aatcccaaaa cgttgggcac
    64981 cgaagtagtt cggtacacct tttacgcaaa tatcgatcag acgttgttca acgtcatcgc
    65041 gattgctcac ttcgcgcaga accagggtaa aggcgttacc tttcagcgcg cctaaacgca
    65101 gcttgcgctt gtgccgcgca tactccagca cctggcagcc ttccagttga aaggcgctca
    65161 gatcgggcat ttccttgcct ggcacgcgag cgcataacca ctgttccgta acagcatgtt
    65221 tgtctttttg cccagcgaag ctgacttcac gggcatgaat tttcaggaat ttcgccagtg
    65281 catccgccac aaaacgggta ttgcagccgt ttttgaggat tctaaccaga atatgctcac
    65341 cttcaccatc aggctcaaag cccaaatctt ccaccaccac aaagtcttcc ggattggctt
    65401 tcagcagccc ggtgccttgc ggtttaccgt ggaggtaagt gagattatca aactcaatca
    65461 ttttgttgcc ttaatgagta gcgccaccgc ttcacaggca atcccttccc cacgtccggt
    65521 aaatccaagt ttttccgtag tagtggcttt cacgttaaca tcatccatat ggcagccgag
    65581 atcttcggca ataaacacgc gcatttgtgg aatgtgcggc aacatcttcg gtgcctgagc
    65641 gatgatagtg acatcgacgt tgcccagggt ataacccttc gcctgaatac gacgccaggc
    65701 ttcgcgtagc agctcgcggc tgtcggcacc tttaaatgcc ggatcggtat ccgggaacag
    65761 cttgccgata tcccccagcg ccgccgcgcc aagcaatgca tcggtcaacg catggagcgc
    65821 cacgtcgcca tcagaatgcg ccagcaatcc tttttcgtaa ggaatgcgta cgccaccaat
    65881 gataattggg ccttcaccgc caaaggcatg tacgtcaaaa ccgtgtccaa ttcgcattat
    65941 gtattctcct gatggatggt tcgggtgagg taaaactcgg ccagtgccaa atcttccggg
    66001 cgcgtgactt taatgttatc cgcacggcct tcgaccaact gaggatggaa tccgcaatat
    66061 tccagcgccg aggcttcgtc ggtaatagtc gcgccttcat ttagagcgcg cgtcagacag
    66121 tcatgtaaca gctcacgagg gaaaaattgc ggcgtcagcg cgtgccataa gccgttgcga
    66181 tcaacggtat gagcaatggc atttttgccc ggttcggcac gtttcatcgt atcgcgcact
    66241 ggtgcggcta ggatccctcc cgtgcggctg gtttcgctca acgccaacaa tcgcgcgagg
    66301 tcatcctgat gcagacaagg acgagcggcg tcatgcacca atacccactg cgcgtcgcca
    66361 gcggctttca aacctgccag cacggaatcg gcacgctcat caccgccatc tacaacggtg
    66421 atttgcggat gattcgccag aggaagttgt gcaaaacggc tatcgccagg acttatggca
    66481 atgacgacac gtttcacccg gggatgcgcc agcagcgcat gcaccgagtg ttcaagaatg
    66541 gtttgattac cgattgagag atattgctta ggacattccg tttgcattcg acggccaaat
    66601 ccggccgccg gaaccacggc gcaaacatcc aaatgagtgg ttgccatgtt aattcccggg
    66661 ctgatttatc gattgttttg ccccgcagac tgtgcgcgct tcgacgcgtc aggcaccaga
    66721 cgataaaaag tttcgcccgg cctggtcatg ctgagttcat tacgcgcacg ctcttcgagc
    66781 gcctcctggc cgccattgag atcgtcaatt tcggcaaaaa gttgatcgtt tcgcgcttta
    66841 agtttcgcgt ttgtagcttg ctgtgccgcc acatcatcat tgacgcgggt atagtcatgt
    66901 ataccgttct taccgaacca cagcgaatac tgtagccaga ccagaatagc cagcaacagc
    66961 agcgttagtt tacccatcct gccccctgaa aaacggcatc atcatcccat gcatccgaag
    67021 acgactctac atcctctgtt ggggataccg cgacaacgcg ggcaaatgta ccacatttgt
    67081 ccattgttac gtatacctag ggcgtgcaga acataatctc attattagtt acggtttgaa
    67141 ttatgaacag aggagacaag aaagtacaaa ttagcccagt agccacataa acagtgcgcc
    67201 aaacataatg cctactgtca ccagggtgaa aacaatactg tagcgtagct ttccgtccat
    67261 caatgaatgc agcgcaatcc ccaccactac cgcgacaggc atcagtgcca gaaagaaagg
    67321 ccaggtgtag ataaagaaga acagcgtgtt agagccataa atcaacatcg gcatcgccag
    67381 cgcaaataac caggagataa aaccgaccac ggcaccaggt agtgaccatg tggtttcttc
    67441 atcctcagta aggctgtcgt tatttgttag tgtaatgtta tggctattac gcatatttga
    67501 tcctgttact ttgacgaacc gggcatggaa acccggtggt gtctcaggat ctgataatat
    67561 cgttctgtct caacagatct aataattgct gtaccaaatt tgttactaat tgttcaccat
    67621 tgagatgaat ttctgccgat tcaggcgctt cgtaaacgga atctattccc gtaaagttgc
    67681 gcagttcacc ggcacgcgct ttcttatata agcctttggg atcgcgggct tcgcaaatcg
    67741 ccagcggcgt atcgacaaac acttcgataa agcgcccttc tcctacgcgt tcgcgaacca
    67801 tctggcgttc ggcgcggtgt ggcgagataa atgcggtcag caccaccagt ccggcttcaa
    67861 ccatcaaatt cgccacttca ccgacgcgac ggatattctc tttacgatcg gcatcgctaa
    67921 aaccgagatc gctgcataat ccgtggcgaa cattgtcgcc atccagcaga tacgtactga
    67981 cgccgagttt atgtaacgcc tcctccagcg ccccggcgac cgttgattta ccggacccag
    68041 agaggccggt aaaccacagc actacaccac gatgaccgtg gtgtagctcg cgttgttgca
    68101 cagtgaccgg atggctatgc cagacgacgt tttcgtcatg cagcgccatt atttatcccc
    68161 cagcaaatcg cgcgcgcccc agtgcggaaa gtggcgacga accagggcat tcaattccag
    68221 ttcgaatgca ctgaattcag atgacgcaac ggcggcctcg tttttcggct catgcaccat
    68281 accggcacca acagtcacgt tgctcaggcg atcgataaaa atcagcccac ccgtcaccgg
    68341 attttgttga taacgatcta acaccagcgg ctcgtcaaaa gtgagatcca cgaggccgat
    68401 cccattcagt ggcaggtttt caacttcacg ctgggtaagg ttattaatat caaccggata
    68461 gcgaatgcca tcaacacgcg cgcgcgtctt cttaccggca attttgatgt cgtaactctg
    68521 gcccggggaa agcggctgtt ccgccatcca taccacatcc accgacgcgc tcggcaccgc
    68581 cggtaacgct tcgtctgccg ccagcagcag atcgccacgg ctgatgtcga tctcatccgt
    68641 cagcaccagg gtgatcgctt ctccggcaaa ggcttcttcg cgatcaccat caaaagtcac
    68701 gatccgcgcg acgtttgatt ccacaccaga gggcagcgct ttgacacgtt gcccgacttc
    68761 cacgcgaccg gatgccagcg ttccggcgta gccacgaaaa tcgagattcg ggcgattaac
    68821 gtactgcacc gggaagcgca ttggctgggc atccaccact cgctggatct ccacggtttc
    68881 cagcacttcg agcagtgtcg gaccgctgta ccacgacata ctttcacttt gcgatgccac
    68941 gttgtcgcct tccagtgcag agagcggcac aaagcggata tccagattac ccggcagctg
    69001 cccggcaaag gtcaaataat cttcacgaat atgggtgaac gtctcttcac tgtaatccac
    69061 cagatccatt ttgttgatcg ccacgaccag atgtttgatc cccaacagtg tggagataaa
    69121 actgtgacga cgggtttgat cgagcacgcc tttacgggca tcgatcagta agatcgccag
    69181 ttcacatgtc gatgcgccag ttgccatatt gcgagtgtac tgctcgtgcc ctggggtgtc
    69241 ggcgataata aatttacgct tctcggtaga gaaataacgg taagccacgt caatggtgat
    69301 gccctgttcg cgctcagctt gcaggccgtc caccagcagt gccagatcca gcttttcgcc
    69361 ctgggtgccg tgacgcttac tgtcgttatg cagcgatgag agctgatctt cgtagatttg
    69421 gcgggtatcg tgcagcaggc gaccaatcag ggtacttttg ccgtcatcga cgctaccaca
    69481 ggtcagaaaa cgcagcaggc ttttatgttg ttgcgcaatc atccaggctt cgacgccgcc
    69541 ttcattggcg atttgttgtg caagtgcggt gttcatctta aaaatacccc tgacgttttt
    69601 tcagctccat agaccccgcc tggtcgcggt caatcacgcg gccctgacgt tcactggtgg
    69661 tagaaaccag catctcttcg atgatctccg gcagtgtttg tgcatttgac tccaccgcac
    69721 cggtcagcgg ccagcagccc agcgtacgga aacgcaccat ccgtttttta atcacttcgc
    69781 ccggttgcag gtcgatacgg ttgtcatcaa tcatcatcaa cataccgtcg cgttccagaa
    69841 ccggacgttc cgcagcgaga tacagtggca caatgtcgat attttccagc cagatgtatt
    69901 gccagatatc ctgctcggtc cagttagaga gcgggaagac gcggatgctt tcacctttgt
    69961 taatttgccc gttgtagttg tgccacagct ccgggcgctg atttttcgga tcccagcgat
    70021 ggaagcggtc acggaaagag tagattcgct ctttagcgcg ggatttctct tcatcacggc
    70081 gcgcaccacc gaaggcggca tcaaaaccgt atttgttcag cgcctgtttc aggccttcag
    70141 ttttcataat atcggtatgt ttcgcgctgc cgtgtacgaa tggattaatc cccatcgcca
    70201 cgccttccgg gtttttatgc accagcagct cgcagccgta ggctttagca gtacgatcgc
    70261 ggaactcata catctcgcgg aatttccagc cggtatcgac atgcagcaac gggaaaggca
    70321 gcgtacctgg ataaaacgcc ttgcgcgcca gatgcagcat gacgctggaa tctttaccga
    70381 tagagtagag catcaccgga tttgagaatt ctgccgccac ctcgcgaata atgtggatgc
    70441 tttccgcctc cagttgccgc aggtgagtaa gtcgtttttg agccataacc gttcctttgc
    70501 aataccgcta ttttcttgcc atcagatgtt tcgactatag ggagcgtaag agaacgaatg
    70561 aaattaccaa ttagaatgag tagttcctta acggaataac gatttggcaa agctaatatc
    70621 aaaaagtgct taaggcaccg gatttcgggc gtttaggaag atttgaaatt gttttagcgc
    70681 agcggcagtt tcatactatg gcggtaaaaa aatttgcatg gtatttaagg actcactatg
    70741 ttttccgcat tgcgccaccg taccgctgcc ctggcgctcg gcgtatgctt tattctcccc
    70801 gtacacgcct cgtcacctaa acctggcgat tttgctaata ctcaggcacg acatattgct
    70861 actttctttc cgggacgcat gaccggaact cctgcagaaa tgttatctgc cgattatatt
    70921 cgccaacagt ttcagcaaat gggttatcgc agtgatattc ggacatttaa tagtcggtat
    70981 atttataccg cccgcgataa tcgtaagagc tggcataacg tgacgggaag tacggtgatt
    71041 gccgctcatg aaggcaaagc gccgcagcag atcatcatta tggcgcatct ggatacttac
    71101 gccccgctga gcgatgctga cgccgatgcc aatctcggcg ggctgacgtt acaaggaatg
    71161 gatgataacg ccgcaggttt aggtgtcatg ctggaattgg cagaacgcct gaaaaatacg
    71221 cctaccgagt atggtattcg atttgtggcg accagcggcg aagaggaagg gaaattaggc
    71281 gctgagaatt tactcaagcg gatgagtgac accgaaaaga aaaatacgct gctggtgatt
    71341 aatctcgata acttaattgt tggcgataaa ttgtatttca acagcggtgt aaaaacccct
    71401 gaagcagtaa ggaaattaac gcgcgacagg gcgctggcaa ttgcgcgcag tcacggaata
    71461 gccgcaacga ccaatccggg gttgaataaa aattatccga aaggcactgg gtgttgtaat
    71521 gacgcagaaa tattcgacaa agcgggcatt gctgtacttt cggtggaagc gactaactgg
    71581 aatcttggga ataaggatgg ttatcagcaa cgcgcaaaaa cagccgcatt ccctgcggga
    71641 aatagctggc atgacgtaag actggataat caacagcata ttgataaggc acttcctgga
    71701 agaatagaac gtcgctgccg tgacgttatg cggataatgc taccgttggt gaaggagctg
    71761 gcgaaggcgt cttgatgggt ttgaaaatgg gagctgggag ttctaccgca ggggcgggga
    71821 attctaagtg atatccatta tcgcatccag tgcgcccggt ttatccccgc tggcgcgggg
    71881 aacacactaa gcatacataa ctgtttttaa acaaatttat tccgcatcaa caatctacca
    71941 actaaattaa aacatttcct tatttttaaa gaacggataa cttattgatt atcaacagga
    72001 agaaaagaaa ccaaacgtaa cccatccaaa tccaccggaa tacgtctgtt ttctccccag
    72061 gtctgaaatt caaaacccga ctcggtattg gtcgcccagg ccatcaccac atttccgcaa
    72121 ccagccagtt gggtaatttg ctgccagatc atctcccgaa tacgttttga tgtatcacca
    72181 acatacacac cggcacgcac ttccagtagc cagattgcga gccgtccacg taagcgtggc
    72241 gggacatttt ctgtaacaac cacgaccatg ctcatcagcc gcgtcctcga tgaccgctat
    72301 cgcccaacgt ttcaggttcg gggatggctg gcggtaacat atccggcgca ggttgtggcg
    72361 gttcaatttc acctgcggca aggacttcct caattaacgg tattaatttg cccgttaact
    72421 tagtgctacg gaaaatatca cgacaggcta atctgacttc tttatcaggt tctgcgggtt
    72481 gcctcgccgc tatttcaaat gcctttggta caaccgaatc aaatttaatg atatcggcta
    72541 tgtcataaac aaatgaaagc ggtttgccac tatggataaa cccaatagcg ggcgcatatc
    72601 ccgcggctaa tactgccgct tcagatatac cgtacagaca tgatgtagca gcactgatgc
    72661 agcgattcac aacatcgcct ttttcccagt ctttaggatc gtatttgcga ccattccatt
    72721 tcacaccata ttgtttcgcc agtaatgcat acgtctggcg aacgcgagat ccctcaattc
    72781 cacgtagctg ctccactgaa cggcgagctg gcggtggctc acgaaaacgt aattcataca
    72841 ttttgcgcac caccttcata cgtagatctt ccgttaaagc cagctttgcc tggtagagta
    72901 acttatcagc acgcgcccca ccgggttgtc cggaagagta gacgcgaaca cccgcttcac
    72961 cgacccagac ctgtagcgtc cccaccgtgg cggccagatg caccgccgcg tgggaaactc
    73021 tcgttcccgg ttcgagcata atgcaggcga ccgatcccac cggaatgtgc gtgcggatcc
    73081 cggttttatc gatcagcacg aaagcgccgt ccagtacgtc gatttgcccg tactggagga
    73141 agatcataga ggtgcgatct tttaacggga tcgggctcag cggtacaaac gtcacgcctc
    73201 tgctccgggt ttgatcagca tcagaccaca gccgaacgcg cggcttttgc catacccctg
    73261 actgagacgt tgcagaaata acccgggatc ggtgaccgta agcatccccg tataatccac
    73321 gctactgaac tggatcagtt gctgggagtt ttcccgccgc agttgctgtt gtcggtaggc
    73381 atcaaccgag atatccagca gtgtaaaacc acttctctcc ccctgcgctg ccagccagtc
    73441 cagcgccgcc tgttgttgat gcaaccagac atcacttcct tccgcctgcc ccctcacctg
    73501 ccgtttcgcc tccatcagca gatcgtggcg cttgcccgct ttacagattg ttggattcgc
    73561 ccgcaggttg aaacaaagtt gttgtccggt acacagctcg ggcgcaaatg accggcattc
    73621 tatggtgaac gtatcacttt ccgccgggcg ttcctgcgac agtacaaaaa agcgaaacgc
    73681 gccctggagt tcttcccgac gataaagaaa ttgcctttct ttgccgctag ggaagagatc
    73741 ccacagccac tgatgcatca catattcacc gcgatccacc agatgcagca actgcgcagg
    73801 cgaaagctgg ccggtatgta aggttattct tgagaggtac atggttcctc cttgctgagc
    73861 cacggcccct gattgacggt gcgttcccca aacagccact gctgacgatt taaaggaaca
    73921 tcccggcggc gtaatatttt gctcgcgacc aggccgtcgt gtttcccttc ccaccagcat
    73981 tcatcctgaa gtttcgggag tgaaactttc agtttatgga aatgatcctg atactgttgg
    74041 tatgcattac ataaggcatc acacgcgttg ccttcgagca gtaacggcgc aagaggtaat
    74101 gccagcggat gactttttcg ccccagataa agcggaaaaa ctggatggcg taaaccgtcc
    74161 tgcaactgtt cgaggctgta aggcgcatcg gctgttgttg ccaccgccac catccaccag
    74221 gcatcggtgt agtagtcgcg ccgggagata atcgcgctca aaagctcagg gtcgctcaac
    74281 tcttcgcgac ggctgaaata acgtgcttta cgcacctctt ttggcatctg gaccgtgtga
    74341 taatcccgtg cccagcgcgg gttacggctg gcgcaaacca ccagtgaata gtggcgatta
    74401 aacgcgttta agcgttcggt atcatcacgc cggatcccta ccccggcagc cagcagcccc
    74461 agcaatgctg agagcgaagg cagttcatgg gtatgacgca cttcgccggg ggcatcgacg
    74521 ccccaggatg ccatcggccc atgaagctga aaaatcagat attggctcat aagccgcccc
    74581 ttacgcgcag ataaagtcca gcacgtcctt catgcttccc tgtttgttca tcacgtcaaa
    74641 acttgcgtaa tcggtcttct gttcgtagac cgtattcata ttttcgcgaa gagttgtaat
    74701 acgctgcacc gccacctcta actgacgggt gccattaatg ggttcataga aagctgccgc
    74761 cagagaacgc ggttgatcgg tgcctttttc tgccagcgcc caggaggcat aagcccggct
    74821 ggcaaagctg ttttgtttac cggttgggga gactttaagc gcggcttccg taaaggcgcg
    74881 tatggtctga ttagctaacg cttcgtcacc gccgaggttt tctaccagca gatctttatc
    74941 aatgcagata agatataggt gtagaacagc gcagaaccga atccggtttc atctacatga
    75001 ccggcaccgg catcttcaga agcctggcgt aaatcatcta cggcggtgaa aaaatcattt
    75061 tcgacaatcg tttcactgac accaaacgca tgcgcgacct ggcaggcggc ttctacatta
    75121 aacccgggtt ttttcgccag catacgacca aacatagcga tatctaccgc catacggtct
    75181 ttacgtaaca aagcgagatc tttctctttt ggcgcgcgct tttcttctgc cagttgatgg
    75241 gccagcgctt ttacggcgtc aaattctgcc gggctgatat ggacgagctg ttcagtttcg
    75301 gcgctagtga gcggatcttt tggttttttg tcgttttttt gttttttgtc ttttttggct
    75361 ttcccaagat aatcggctat ctctactgcc cattcgatgg cttttttatc ttcgattcct
    75421 ttctcaatca ggatagttgc cgcctcacgc gcaatacgcc cgctacgaac accaatatgg
    75481 cccgccagcg cctgttcaaa aagttcagaa gtgcgccaag cacgcttcag actttgcgag
    75541 gaaacgcgca gacgcgttgc tccacccaga atcacagttt tcggagagcc ggaatcatca
    75601 cggttaagat tggcagcagg gtaagcggtt aacaaatgaa gctgaataaa tgttgtcatg
    75661 agatagtcct ttattaattt tgttcgttat cggcgtcgcc agcctggtaa tattccagcg
    75721 cccagcgccc agcgcccagc gcccagcgcc cagcgcccag cgcccagcgc ccagcggata
    75781 cggataaatt ctgttggtcg ctgctggcgg cggtgatgat tgagcaggtc atcgctctcc
    75841 tggcaccagc ggaagacccc ctcttctaga gagtcaagat tgacggaacc gtttaataat
    75901 ttgaccgcac ggcgtaactg ccgcaataaa tcatccggcg tttttactgc caacaaacga
    75961 gtaaaccgcc cctttttcat taccgccgcc agttgcgcgg caaaaggctg ccgttcgtca
    76021 atagctttaa cattggcgct aactgctgct atcagcgcta gtgcggtgat acgccactcg
    76081 ggttcatcct gccactttat ttgtctgttc ttaagaaaca ggcgaaatcc atccgtcaga
    76141 caaacatcat taaccgtcgt actacgccgc agactggcac gctcgccgcg tttatcctgc
    76201 aactcttcat gccatttacg cagcgcaact ttatgctcat cttttacaat actcattcag
    76261 cagcctcctg ctttttctcc ctggcggcgt tagcattttg cttctccgct gatgttgtaa
    76321 aatatttctt gcgtgcggtc atgacgcgtt ccaaatcaac gggctcatat ggattggtaa
    76381 agacacgatc gtcaaaatcc tgacgcgcga ataaccacat ttccttttgc catttactga
    76441 gtaattcgtc cggatcctga ccttcttcaa ttttgcgcac taatctcagg aatcgatgct
    76501 gagttttgtt ccagaagtca atatccacaa aaccgaaatc aagctttgtg gttttcttct
    76561 cagagaacca tgcttctttc aacgctcggt gtaacaagct tagaatgtgt gatgccgctt
    76621 gcgctgccag acgcaactta ggtattaggt cttctttttt gtttaacaac agcgggaaat
    76681 ggtgttcata ccaacaacga accttcatat cttcaaaatc aaaaccaaat ccccataagc
    76741 ccacccttgt ctgctttaga ttgctggcat tcaaaagttt cacgacctgt gcggggagtt
    76801 cagtattgtt ttttgagtta cctacctcta tgaggcctaa ccagtcgcgc cagattaaac
    76861 caccaggttg tggtttaact gagtaaaaat ctccaccctc tttaagcggc agacggtaag
    76921 gtgttagagg atggcgccac atgacgtatt gaacaccata gtttttgagt gacatcaagc
    76981 ccaaaagagc atcgctctgc ctaccgcaaa tgtcgcagtt acctattgag gttgtcttaa
    77041 aatcaatacg tatacgtcgt ggcattcccc agtaggcctg aagtttattg acttgttcat
    77101 ccgttaccac agcaccgtcc agttcgctgg tacgcgtcgg tgcaagccaa ggaaagacca
    77161 ggtcatcaaa ggtttttggt aaaggtaaat cggcttcatc ttgcggcatt acgtttagcc
    77221 acagctttcg ccacaaaggg gtttgttgat tgccctgata ctccagcaat tctataagtg
    77281 tcgtcagagg ccctccgcca cgtagcccag gatagtaacc gcgtccacct ataggtgcat
    77341 tcaactggat tgaaaaaagc gctaaaggca cacaatgcag gcacagatgc tgagttgtgt
    77401 ctcgcttaat aaaatggtct gtatttcgtt cttttgtttg ttttcctggt gcgtcaggaa
    77461 gaagcgaagc aataaaagtt gccttaactt ttaattcatc aaaatcctgc ataaatgaag
    77521 gggaatctgg cccaaactga aaagcatgtt ctaaagacag caatgcttcc cttagctttt
    77581 cagcttccag tccgtcttcc cagatatcat cccaactacg ttgatctttt ggcgcgaagc
    77641 tggtttgtag tagccccagc aaaaactgcc aggccgcccc ctggagatct gcccgcggcg
    77701 cagcgatatc gacaacattt tcatcagcca gatcgactgg tgccagtttg cctgtcgttc
    77761 cgtctttaaa acgaacgggc aaccacgggg ttgtcagaag tgaaaacgag ttcatacgca
    77821 tcctctcgta aaaaagacca tcccaggtcg gttgtccatc cttccatcct tttctgtata
    77881 tcaactattc agagagtctt gtcgcagaca tctcaaccaa ccttgccaat caatccctcc
    77941 ctggccgaat acccgcaact ttcgtcatcg gtgactaaaa tcacgtttgc catttccgga
    78001 tcttgccgct gttcaacgca ccactgcctg aacgcatccc cttccagtaa agaaaactca
    78061 tcccgatgtt ttttccacca gcttcggcgc actctgacaa cgctcatttc ccatgcgtga
    78121 gcaccggtgg cataaggctt caccacaccg tcaatacagg tagccagcca cagggaaaca
    78181 gactcttcag ccagacgtgt cgacagtttt tccggaaggt aatcgttgat attggcggca
    78241 tagccgagcc tgaagttcag cacatacttt ttagcccttg cgcgatcaca gtaatatttg
    78301 cccacttgct cctgctcgct gcgggcaaat ccttccggca ttaccacgtc ctcaccgtaa
    78361 actgattcaa taagaagccg ggctgcgtgc ggcatctgaa tagcgccttg ctcacgcagc
    78421 acacgctgcg tcagccagat tcgcccatga tcgggataga catatgcact gttacgcatg
    78481 gcactgccga accattcgtc accaggagcg tcatcccaga cgggggccag aatcagcaat
    78541 tcaggggggg aacgctcgtc ttttccgtca cgctttaact gaccattaat atcgcggata
    78601 tgccgctgta atcgccccgc tcgctggatt agcaaatcaa tgggggccag gtcggagatc
    78661 atttcgtcca ggtcaatatc cacgctttgt tcaattactt gtgtacaaac aatgacttga
    78721 gacgctctct gtaaactaca atatttacca aagcgtgcca gcgtttccgt ttcaattcgc
    78781 tggcgatcgc taaaagcaaa gcggctatga aaaagtgaaa ggctggaagc aggaatgacg
    78841 ccgcgggcaa gcagctgacg atacacctga atagcgtcat caacagaatt ccgaatccag
    78901 gcgatgcatt tcccctgact taccgccgat tcgatacgcg caatacactc ttgttcacta
    78961 tggagccaac ccacgctcac gctacgttca acttctttgc gcgtcgctac ccggtgcgaa
    79021 tgtacatcgg ttttcgtgac atgcgtcagc caggggtaat catcttttcc caggagtggg
    79081 gcttcttgct ggccctctgc accacgcgca aaggcggcga cgagtttgtc gcgctgctgt
    79141 tgagataacg tagcagaaag caaaataacg ctgtttccgc cacgcgcctg ccgctcgatc
    79201 agcccttcaa gaatgcacga catataagcg tcacaggcgt ggatctcatc agccagcagg
    79261 attttgttac tcagccccag aagccgcaga ttattatgtt taaacggcat cactgccatc
    79321 atcgcctgat ccagggtgcc gacgccaatt tcagccagca acgccttctt gttactgtcg
    79381 gcaaactagg ccgcacaacc ctggctgaaa gcttgttcat ccggttcttc tgacccgatt
    79441 aaatcaccgg accagagtga ttcatta
//
LOCUS       DADMJE010000002        77378 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.002, whole genome shotgun sequence.
ACCESSION   DADMJE010000002 DADMJE010000000
VERSION     DADMJE010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 77378)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 77378)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..77378
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.002"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1624
                     /locus_tag="JN001_000084"
     CDS             <1..1624
                     /locus_tag="JN001_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000556401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY9051435.1"
                     /translation="NNGSQVNVTDSSLVSDTIGLTNGSSLNIGANGVVATDHLTVDSY
                     STVNLTESTGWNNYSNLYTNTITVTNGGVLDVNVDQFDTEAFRTDKLELTSGNIADHN
                     GNVISGVFDINSSDYVLNADLVNDRTWDTSKSNYGYGIVAMNSDGHLTINGNGDVDNG
                     TELDNSSVDNVVAATGNYKVRIDNATGAGTIADYKDKELIRVNDANTNATFSAANKAD
                     LGAYTYQAEQRGNTVVLQQMELTDYANMALSIPSANTNIWNLEQDTVGTRLTNSRHGL
                     ADNGGAWVSYFGGNFNGDNGTINYDQDVNGIMVGVDTKIDGNNAKWIVGAAAGFAKGD
                     MNDRSGQVDQDSQTAYIYSSAHFANNVFVDGSLSYSHFNNDLSATMSNGTYVDGSTNS
                     DAWGFGLKAGYDFKLGDAGYETPYGSVSGLFQSGDDYQLSNDMKVDGQSYDSMRYELG
                     VDAGYTFTYSEDQALTPYFKLAYVYDDSNNDNDVNGDSIDNGTEGSAVRVGLGTQFSF
                     TKNFSAYTDANYLGGGDVDQDWSANVGVKYTW"
     gene            1712..2335
                     /gene="iprA"
                     /locus_tag="JN001_000085"
     CDS             1712..2335
                     /gene="iprA"
                     /locus_tag="JN001_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414909.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogen peroxide resistance inhibitor IprA"
                     /protein_id="HAY9051436.1"
                     /translation="MLSVVKPLQEFGKLDKCLSRYGTRFEFNNEKQVIFSSDVNSEDT
                     FFILEGVISLRREENVLIGITQASYIMGLADGLMKNDIPYKLISEGNCTGYHLPAKQT
                     ITLIEQNQLWRDAFYWLAWQNRILELRDVQLIGHNSYEQIRATLLSMIDWNEELRSRI
                     GVMNYIHQRTRISRSVVAEVLAALRKGGYIEMNKGKLVAINCLPSEY"
     gene            complement(2336..3493)
                     /locus_tag="JN001_000086"
     CDS             complement(2336..3493)
                     /locus_tag="JN001_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OXA-12 family class D beta-lactamase AmpH"
                     /protein_id="HAY9051437.1"
                     /translation="MKRSLLFSAVLCAASLTSVHAAQPITEPEFASDIVDRYADHIFY
                     GSGATGMALVVIDGNQRVFRSYGETRPGNNVRPQLDSVVRIASLTKLMTSEMLVKLLD
                     QGTVKLNDPLSKYAPPGARVPTYNGTPITLVNLATHTSALPREQPGGAAHRPVFVWPT
                     REQRWKYLSTAKLKAAPGSQAAYSNLAFDLLADALANASGKPYTQLFEEQITRPLGMK
                     DTTYTPSPDQCRRLMVAERGASPCNNTLAAIGSGGVYSTPGDMMRWMQQYLSSDFYQR
                     SNQADRMQTLIYQRAQFTKVIGMDVPGKADALGLGWVYMAPKEGRPGIIQKTGGGGGF
                     ITYMAMIPQKNIGAFVVVTRSPLTRFKNMSDGINDLVTELSGNKPLVIPAS"
     gene            3845..5065
                     /gene="sbmA"
                     /locus_tag="JN001_000087"
     CDS             3845..5065
                     /gene="sbmA"
                     /locus_tag="JN001_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706191.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide antibiotic transporter SbmA"
                     /protein_id="HAY9051438.1"
                     /translation="MFKSFFPKPGAFFLSAFVWALIAVIFWQAGGGDWVARITGASGQ
                     IPISAARFWSLDFLIFYAYYIVCVGLFAFFWFIYSPHRWQYWSILGTALIIFVTWFLV
                     EVGVAVNAWYAPFYDLIQTALSSPHKVTIEQFYREVGVFLGIALIAVVISVLNNFFVS
                     HYVFRWRTAMNEYYMANWQQLRHIEGAAQRVQEDTMRFASTLENMGVSFINAIMTLVA
                     FLPVLVTLSAHVPELPIIGHIPYGLVIAAIVWSLMGTGLLAVVGIKLPGLEFKNQRVE
                     AAYRKELVYGEDDATRATPPTVRELFSAVRKNYFRLYFHYMYFNIARILYLQVDNVFG
                     LFLLFPSIVAGTITLGLMTQITNVFGQVRGAFQYLINSWTTLVELMSIYKRLRSFEHE
                     LDGDKIQEVTHTLS"
     gene            5078..6172
                     /gene="yaiW"
                     /locus_tag="JN001_000088"
     CDS             5078..6172
                     /gene="yaiW"
                     /locus_tag="JN001_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-exposed outer membrane lipoprotein YaiW"
                     /protein_id="HAY9051439.1"
                     /translation="MSRVNHLSSLSLLAVLVLAGCSSQAPQPLKKGEKAIDVASVVRQ
                     KMPASVKDRDAWAKDLATTFESQGLAPTLENVCSVLAVAQQESNYQADPAVPGLSKIA
                     WQEIDRRAERMHIPAFLVHTALKIKSPNGKSYSERLDSVRTEKQLSAIFDDLISMVPM
                     GQTLFGSLNPVRTGGPMQVSIAFAEQHTKGYPWKMDGTVRQEVFSRRGGLWFGTYHLL
                     NYPASYSAPIYRFADFNAGWYASRNAAFQNAVSKASGVKLALDGDLIRYDSKEPGKTE
                     LATRKLAGKLGMSDSEIRRQLEKGDSFSFEETALYKKVYQLAEAKTGKSLPREMLPGI
                     QLESPKITRNLTTAWFAKRVDERRARCMKQ"
     gene            complement(6231..6539)
                     /locus_tag="JN001_000089"
     CDS             complement(6231..6539)
                     /locus_tag="JN001_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2755 family protein"
                     /protein_id="HAY9051440.1"
                     /translation="MADFTLSKSLFSGKYRNASSTPGNIAYALFVLFCFWAGAQLLNL
                     LVHAPGVYERLMQVQETGRPRVEIGLGVGTIFGLIPFLVGCLIFAVVALWLHWRHRRQ
                     "
     gene            6799..7011
                     /locus_tag="JN001_000090"
     CDS             6799..7011
                     /locus_tag="JN001_000090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414914.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2754 domain-containing protein"
                     /protein_id="HAY9051441.1"
                     /translation="MNLPVKIRRDWHYYAFAIGLIFILNGVVGLLGFEAKGWQTYAVG
                     LVTWVISFWLAGLIIRRRDEETENAQ"
     gene            complement(7035..8129)
                     /gene="ddlA"
                     /locus_tag="JN001_000091"
     CDS             complement(7035..8129)
                     /gene="ddlA"
                     /locus_tag="JN001_000091"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY9051442.1"
                     /translation="MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKSRFDVVLLGID
                     KQGQWHVSDASNYLLNADDPAHIALRPSATSLAQVPSKHEHQLIDAQNGQPLPTVDVI
                     FPIVHGTLGEDGSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDAGLNIAPFIT
                     LTRANRHNISFAEVESKLRLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKV
                     IVEQGIKGREIECAVLGNDNPQASTCGEIVLTSDFYAYDTKYIDEDGAKVVVPAAIAP
                     EINDKIRAIAVQAYQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQA
                     SGLGYTDLITRLIELALERHAADNALKTTM"
     gene            8207..8364
                     /locus_tag="JN001_000092"
                     /pseudo
     CDS             8207..8364
                     /locus_tag="JN001_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8591..8851
                     /gene="iraP"
                     /locus_tag="JN001_000093"
     CDS             8591..8851
                     /gene="iraP"
                     /locus_tag="JN001_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraP"
                     /protein_id="HAY9051443.1"
                     /translation="MKNLIAELLLKLAQKEEESKELCAQVEALEIIVTAMLRNMAQND
                     QQRLIEQVEGALYEVKPDASIPDDDTELLRNYVKKLLKHPRQ"
     gene            8952..10367
                     /gene="phoA"
                     /locus_tag="JN001_000094"
     CDS             8952..10367
                     /gene="phoA"
                     /locus_tag="JN001_000094"
                     /EC_number="3.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414917.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase"
                     /protein_id="HAY9051444.1"
                     /translation="MKQSTIALALLPLLFTPVTKARTPEMPVLENRAAQGDITAPGGA
                     RRLTGDQTAALRDSLSDKPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPL
                     TGQYTHYALNKKTGKPDYVTDSAASATAWSTGVKTYNGALGVDIHEKDHPTILEMAKA
                     AGLATGNVSTAELQDATPAALVAHVTSRKCYGPSATSEKCPGNALEKGGKGSITEQLL
                     NARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNAVTEANQQKP
                     LLGLFADGNMPVRWLGPKATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSK
                     NEKGFFLQVEGASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKDGNTLVIVTADH
                     AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAAN
                     VVGLTDQTDLFYTMKAALGLK"
     gene            10486..10806
                     /gene="psiF"
                     /locus_tag="JN001_000095"
     CDS             10486..10806
                     /gene="psiF"
                     /locus_tag="JN001_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PsiF"
                     /protein_id="HAY9051445.1"
                     /translation="MKITLLVTLFFGLVFLTTVGAAERTLTPQQQRMTSCNQQATAQA
                     LKGDARKTYMSDCLKNSKSAPGEKSLTPQQQKMRECNNQATQQSLKGDDRNKFMSACL
                     KKAA"
     gene            10908..12023
                     /gene="adrA"
                     /locus_tag="JN001_000096"
                     /gene_synonym="dgcC"
     CDS             10908..12023
                     /gene="adrA"
                     /locus_tag="JN001_000096"
                     /gene_synonym="dgcC"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase AdrA"
                     /protein_id="HAY9051446.1"
                     /translation="MFPKIMNDENFFKKAAAHGEEPPLTPQNEHQRSGLRFARRVRLP
                     RAVGLAGMFLPIASTLVSHPPPGWWWLVLVGWAFVWPHLAWQIASRAVDPLSREIYNL
                     KTDAVLAGMWVGVMGVNVLPSTAMLMIMCLNLMGAGGPRLFVAGLVLMVVSCLVTLEL
                     TGITVSFNSAPLEWWLSLPIIVVYPLLFGWVSYQTATKLAEHKRRLQVMSTRDGMTGV
                     YNRRHWETMLRNEFDNCRRHNRDATLLIIDIDHFKSINDTWGHDVGDEAIVALTRQLQ
                     ITLRGSDVIGRFGGDEFAVIMSGTPAESAITAMLRVREGLNTLRLPNTPQVTLRISVG
                     VAPLNPQMSHYREWLKSADLALYKAKKAGRNRTEVAA"
     gene            complement(12040..12849)
                     /gene="proC"
                     /locus_tag="JN001_000097"
     CDS             complement(12040..12849)
                     /gene="proC"
                     /locus_tag="JN001_000097"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HAY9051447.1"
                     /translation="MEKKIGFIGCGNMGKAILGGLIASGQVLPGQIWVYTPSPNKVAA
                     LHDQFGINAAESAQEVAQIADIIFAAVKPGIMIKVLSEITSSLNKDSLVVSIAAGVTL
                     DQLARALGHDRKIIRAMPNTPALVNAGMTSVTPNALVTPEDTADVLNIFRCFGEAEVI
                     AEPMIHPVVGVSGSSPAYVFMFIEAMADAAVLGGMPRAQAYKFAAQAVMGSAKMVLET
                     GEHPGALKDMVCSPGGTTIEAVRVLEEKGFRAAVIEAMTKCMEKSEKLSKS"
     gene            12969..13427
                     /locus_tag="JN001_000098"
     CDS             12969..13427
                     /locus_tag="JN001_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414921.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HAY9051448.1"
                     /translation="MTIWVDADACPNVIKEILYRAAERMQMPLVLVANQSLRVPPSRF
                     IRTLRVAAGFDVADNEIVRQCEAGDLVITADIPLAAEAIEKGAAALNPRGERYTPATI
                     RERLTMRDFMDTLRASGIQTGGPDSLSQRDRQAFAAELEKWWLEVQRSRG"
     gene            13610..14134
                     /gene="aroL"
                     /locus_tag="JN001_000099"
     CDS             13610..14134
                     /gene="aroL"
                     /locus_tag="JN001_000099"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroL"
                     /protein_id="HAY9051449.1"
                     /translation="MTQPLFLIGPRGCGKTTVGMALADSLNRRFVDTDQWLQSQLNMT
                     VAEIVEREEWAGFRARETAALEAVTAPSTVIATGGGIILTEFNRHFMQNNGIVVYLCA
                     PVSVLVNRLQAAPEEDLRPTLTGKPLSEEVQEVLEERDALYREVAHIIIDATNEPSQV
                     ISEIRSALAQTINC"
     gene            14184..14375
                     /gene="yaiA"
                     /locus_tag="JN001_000100"
     CDS             14184..14375
                     /gene="yaiA"
                     /locus_tag="JN001_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YaiA"
                     /protein_id="HAY9051450.1"
                     /translation="MPTKPPYPREAYIVTIEKGKPGQTVTWYQLRADHPKPDSLISEH
                     PTAQEAMDAKKRYEDPDKE"
     gene            14633..15310
                     /locus_tag="JN001_000101"
     CDS             14633..15310
                     /locus_tag="JN001_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AroM family protein"
                     /protein_id="HAY9051451.1"
                     /translation="MSASLAILTIGIVPMQEVLPLLTEYIDEDNISHHSLLGKLSREE
                     VMAEYAPEAGEDTILTLLNDNQLAHVSRRKVERDLQGVVEVLDNQGYDVILLMSTANI
                     SSMTARNTIFLEPSRILPPLVSSIVEDHQVGVIVPVEEMLPVQAQKWQILQKSPVFSL
                     GNPIHDSEQKIIDAGKELLAKGADVIMLDCLGFHQRHRDLLQKQLDVPVLLSNVLIAR
                     LAAELLV"
     gene            15382..15666
                     /gene="ppnP"
                     /locus_tag="JN001_000102"
     CDS             15382..15666
                     /gene="ppnP"
                     /locus_tag="JN001_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine/purine nucleoside phosphorylase"
                     /protein_id="HAY9051452.1"
                     /translation="MLQSNEYFSGKVKSIGFSSSSTGRASVGVMVEGEYTFSTAEPEE
                     MTVISGALNVLLPDATDWQVYEAGSVFNVPGHSEFHLQVAEPTSYLCRYL"
     gene            15814..16155
                     /locus_tag="JN001_000103"
                     /pseudo
     CDS             15814..16155
                     /locus_tag="JN001_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308469.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2773 domain-containing protein"
     gene            16152..16235
                     /locus_tag="JN001_000104"
     CDS             16152..16235
                     /locus_tag="JN001_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051453.1"
                     /translation="MTQRPWSKLQHKTHNIAALKIIVRRSE"
     gene            complement(16313..17224)
                     /gene="rdgC"
                     /locus_tag="JN001_000105"
     CDS             complement(16313..17224)
                     /gene="rdgC"
                     /locus_tag="JN001_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-associated protein RdgC"
                     /protein_id="HAY9051454.1"
                     /translation="MLWFKNLMVYRLSREISLRAEEMEKQLASMAFTPCGSQDMAKMG
                     WVPPMGSHSDALTHVANGQIVICARKEEKILPSPVIKQALEAKIAKLEAEQARKLKKT
                     EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGS
                     LPVVPLSMENPIELTLTEWVRSGSAAQGFQLLDEAELKSLLEDGGVIRAKKQDLTSEE
                     ITNHIEAGKVVTKLALDWQQRIQFVMCDDGSLKRLKFCDELRDQNEDIDREDFAQRFD
                     ADFILMTGELAALIQNLIEGLGGEAQR"
     gene            17349..18257
                     /gene="mak"
                     /locus_tag="JN001_000106"
     CDS             17349..18257
                     /gene="mak"
                     /locus_tag="JN001_000106"
                     /EC_number="2.7.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414928.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructokinase"
                     /protein_id="HAY9051455.1"
                     /translation="MRIGIDLGGTKTEVIALGDAGEQLYRHRLPTPRDDYRQTIETIA
                     TLVDMAEQATGQRGTVGMGIPGSISPYTGVVKNANSTWLNGQPFDKDLSARLQREVRL
                     ANDANCLAVSEAVDGAAAGAQTVFAVIIGTGCGAGVAFNGRAHISGNGTAGEWGHNPL
                     PWMDEDELRYREEVPCYCGKQGCIETFISGTGFAMDYRRLSGHALKGSEIIRLVEESD
                     PVAELALRRYELRLAKSLAHVVNILDPDVIVLGGGMSNVDRLYQTVPQLIKQFVFGGE
                     CETPVRKAKHGDSSGVRGAAWLWPQE"
     gene            complement(18400..19584)
                     /gene="araJ"
                     /locus_tag="JN001_000107"
     CDS             complement(18400..19584)
                     /gene="araJ"
                     /locus_tag="JN001_000107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414930.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter AraJ"
                     /protein_id="HAY9051456.1"
                     /translation="MKKVILSLALGTFGLGMAEFGIMGVLTELAHNVGISIPAAGHMI
                     SYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSG
                     FPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTF
                     LLIAVFNIAVMASVYFWVPDIRDEAKGKLREQFHFLRSPAPWLIFAATMFGNAGVFAW
                     FSYVKPYMMFISGFSETAMTFIMMLVGLGMVLGNMLSGRISGRYSPLRIAAVTDFIIV
                     LALLMFFFCGGMKTTSLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAGGQIAFN
                     LGSAVGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGRYKRQQAADTPVLAKP
                     LG"
     gene            complement(19710..22847)
                     /gene="sbcC"
                     /locus_tag="JN001_000108"
     CDS             complement(19710..22847)
                     /gene="sbcC"
                     /locus_tag="JN001_000108"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcC"
                     /protein_id="HAY9051457.1"
                     /translation="MKILSLRLKNLNSLKGEWKIDFTREPFASNGLFAITGPTGAGKT
                     TLLDAICLALYHETPRLSNVSQSQNDLMTRDTAECLAEVEFEVKGEAYRAFWSQNRAR
                     NQPDGNLQVPRVELARCADGKILADKVKDKLELTATLTGLDYGRFTRSMLLSQGQFAA
                     FLNAKPKERAELLEELTGTEIYGQISAMVFEQHKSARTELEKLQAQASGVALLTPEQV
                     QSLTASLQVLTDEEKQLLTAQQQEQQSLNWLTRLDELQQEASRRQQALQQALAEEEKA
                     QPQLAALSLAQPARNLRPHWERIAEHSAALAHTRQQIEEVNTRLQSTMALRASIRHHA
                     AKQSAELQQQQQSLNTWLQEHDRFRQWNNELAGWRAQFSQQTSDREHLRQWQQQLTHA
                     EQKLNALAAITLTLTADEVATALAQHAEQRPLRQRLVALHGQIVPQQKRLAQLMVTIQ
                     NGSLEQTQRNVALNEMRQRYKEKTQQLADVKTICEQEARIKTLEAQRAQLQAGQPCPL
                     CGSTSHPAVKAYQALEPGVNQSRLLALENEVKKLGEEGAALRGQLDALTKQLQRDENE
                     AQSLRQDEQALTQQWQAVTASLNITLQPQDDIQPWLDAQDEHKRQLRLLSQRHELQGQ
                     IAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEDEEESWLATRQQEAQSWQQRQN
                     ELTTLQNRIQQLTPILETLPQSDDLPHSEETVALDNWRQVHEQCLALHSQQQTLQQQD
                     VLAAQSLQKAQAQFDTALQASVFDDQQAFLAALMDEQTLTQLEQLKQNLENQRRQAQT
                     LVTQTAETLAQHQQHRPDGLALTVTVEQIQQELAQTHQKLRENTTSQGEIRQQLKQDA
                     DNRQQQQTLMQQIAQMTQQVEDWGYLNSLIGSKEGDKFRKFAQGLTLDNLVHLANQQL
                     TRLHGRYLLQRKASEALEVEVVDTWQADAVRDTRTLSGGESFLVSLALALSDLVSHKT
                     RIDSLFLDEGFGTLDSETLDTALDALDALNASGKTIGVISHVEAMKERIPVQIKVKKI
                     NGLGYSKLESTFAVK"
     gene            complement(22844..24046)
                     /gene="sbcD"
                     /locus_tag="JN001_000109"
     CDS             complement(22844..24046)
                     /gene="sbcD"
                     /locus_tag="JN001_000109"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease subunit SbcD"
                     /protein_id="HAY9051458.1"
                     /translation="MRILHTSDWHLGQNFYSKSREAEHQAFLDWLLETAQTHQVDAII
                     VAGDVFDTGSPPSYARTLYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDIMAFLNT
                     TVVASAGHAPQILPRRDGTPGAVLCPIPFLRPRDIISSQAGLNGIEKQQHLLAAITDY
                     YQQHYADACKLRGDQPLPIIATGHLTTVGASKSDAVRDIYIGTLDAFPAQNFPPADYI
                     ALGHIHRAQIIGGMEHVRYCGSPIPLSFDECGKSKYVHLVTFSNGKLESVENLNVPVT
                     QPMAVLKGDLASITAQLEQWRDVSQEPPVWLDIEITTDEYLHDIQRKIQALAESLPVE
                     VLLVRRSREQRERVLASQQRETLSELSVEEVFNRRLALEELDESQQQRLQHLFTTTLH
                     TLAGEHEA"
     gene            24236..24925
                     /gene="phoB"
                     /locus_tag="JN001_000110"
     CDS             24236..24925
                     /gene="phoB"
                     /locus_tag="JN001_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000113934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate response regulator transcription
                     factor PhoB"
                     /protein_id="HAY9051459.1"
                     /translation="MARRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNE
                     PWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARGEEEDRVRGLETGADDY
                     ITKPFSPKELVARIKAVMRRISPMAVEEVIEMQGLSLDPTSHRVMAGEEPLEMGPTEF
                     KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALEPGGHDRMVQTV
                     RGTGYRFSTRF"
     gene            24983..26278
                     /gene="phoR"
                     /locus_tag="JN001_000111"
     CDS             24983..26278
                     /gene="phoR"
                     /locus_tag="JN001_000111"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate regulon sensor histidine kinase PhoR"
                     /protein_id="HAY9051460.1"
                     /translation="MLERLSWKRLVLELLLCCLPAFILGAFFGYLPWFLLASVTGLLI
                     WHFWNLLRLSWWLWVDRSMTPPPGRGSWEPLLYGLHQMQLRNKKRRRELGNLIKRFRS
                     GAESLPDAVVLTTEEGGIFWCNGLAQQILGLRWPEDNGQNILNLLRYPEFTQYLKTRD
                     FSRPLNLVLNTGRHLEIRVMPYTHKQLLMVARDVTQMHQLEGARRNFFANVSHELRTP
                     LTVLQGYLEMMDEQPLEGAVREKALHTMREQTQRMEGLVKQLLTLSKIEAAPTQLLNE
                     KVDVPMMLRVVEREAQTLSQKKQTFTFEIDNGLKVSGNEDQLRSAISNLVYNAVNHTP
                     EGTHITVRWQRVPHGAEFSVEDNGPGIAPEHIPRLTERFYRVDKARSRQTGGSGLGLA
                     IVKHAVNHHESRLNIESTVGKGTRFSFVIPERLIAKNSD"
     gene            26685..28004
                     /gene="brnQ"
                     /locus_tag="JN001_000112"
     CDS             26685..28004
                     /gene="brnQ"
                     /locus_tag="JN001_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid transporter carrier
                     protein BrnQ"
                     /protein_id="HAY9051461.1"
                     /translation="MTHQLRSRDIIALGFMTFALFVGAGNIIFPPMVGLQAGEHVWTA
                     AFGFLITAVGLPVLTVVALAKVGGGVDSLSTPIGKVAGVLLATVCYLAVGPLFATPRT
                     ATVSFEVGIAPLTGDSALPLFIYSLVYFAIVILVSLYPGKLLDTVGNFLAPLKIIALV
                     ILSVAAIVWPAGSISTATEAYQNAAFSNGFVNGYLTMDTLGAMVFGIVIVNAARSRGV
                     TEARLLTRYTVWAGLMAGVGLTLLYLALFRLGSDSASLVDQSANGAAILHAYVQHTFG
                     GGGSFLLAALIFIACLVTAVGLTCACAEFFAQYVPLSYRTLVFILGGFSMVVSNLGLS
                     QLIQISVPVLTAIYPPCIALVVLSFTRSWWHNSSRVIAPPMFISLLFGILDGIKASAF
                     SDILPSWAQRLPLAEQGLAWLMPTVVMVVLAIIWDRAAGRQVTSSAH"
     gene            28080..29453
                     /gene="proY"
                     /locus_tag="JN001_000113"
     CDS             28080..29453
                     /gene="proY"
                     /locus_tag="JN001_000113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline-specific permease ProY"
                     /protein_id="HAY9051462.1"
                     /translation="MESKNKLKRGLSTRHIRFMALGSAIGTGLFYGSADAIKMAGPSV
                     LLAYIIGGIAAYIIMRALGEMSVHNPAASSFSRYAQENLGPLAGYITGWTYCFEILIV
                     AIADVTAFGIYMGVWFPTVPHWIWVLSVVLIICAVNLMSVKVFGELEFWFSFFKVATI
                     IIMIVAGFGIIIWGIGNGGQPTGIHNLWSNGGFFSNGWLGMVMSLQMVMFAYGGIEII
                     GITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTAGSPFVLTFQH
                     MGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKTSRRGIPWVT
                     VLVMTTALLFAVYLNYIMPENVFLVIASLATFATVWVWIMILLSQIAFRRRLPPEEVK
                     ALKFKVPGGVATTIGGLIFLLFIIGLIGYHPDTRISLYVGFAWIVVLLIGWMFKRRHD
                     RQLAENQ"
     gene            29609..31331
                     /gene="malZ"
                     /locus_tag="JN001_000114"
                     /pseudo
     CDS             29609..31331
                     /gene="malZ"
                     /locus_tag="JN001_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706291.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin glucosidase"
     gene            complement(31336..31917)
                     /gene="acpH"
                     /locus_tag="JN001_000115"
     CDS             complement(31336..31917)
                     /gene="acpH"
                     /locus_tag="JN001_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP phosphodiesterase"
                     /protein_id="HAY9051463.1"
                     /translation="MNFLAHLHLAHLAESSLSGNLLADFVRGNPEESFPPDVVAGIHM
                     HRRIDVLTDNLPEVREAREWFRRETRRVAPITLDVMWDHFLSRHWSQLSPDFPLQEFI
                     CYARKQVMTILPDSPPRFINLNNYLWSEQWLVRYRDMDFIQNVLNGMASRRPRLDALR
                     DSWYDLNAHYTALGTRFWQFYPRMMAQASHKAL"
     gene            32010..33080
                     /gene="queA"
                     /locus_tag="JN001_000116"
     CDS             32010..33080
                     /gene="queA"
                     /locus_tag="JN001_000116"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HAY9051464.1"
                     /translation="MRVTDFFFELPESLIAHYPMPERSSCRLLSLDGPTGALTHGTFT
                     DLLDKLNPGDLLVFNNTRVIPARLFGRKASGGKIEVLVERMLDDKRILAHIRASKAPK
                     PGAELLLGDDESINATMTARHGALFEVEFNDDRSVLDILNSIGHMPLPPYIDRPDEDA
                     DRELYQTVYSEKPGAVAAPTAGLHFDEPLLEKLRAKGVEMAFVTLHVGAGTFQPVRVD
                     TIEDHIMHSEYAEVPQDVVDAVLAAKARGNRVIAVGTTSVRSLESAAQAAKNDLIEPF
                     FDDTQIFIYPGFQYKVVDALVTNFHLPESTLIMLVSAFAGYQHTMNAYKAAVEEKYRF
                     FSYGDAMFITYNPQAINERVGE"
     gene            33136..34263
                     /gene="tgt"
                     /locus_tag="JN001_000117"
     CDS             33136..34263
                     /gene="tgt"
                     /locus_tag="JN001_000117"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HAY9051465.1"
                     /translation="MKFELDTTDGRARRGRLVFDRGVVETPCFMPVGTYGTVKGMTPE
                     EVEATGAQIILGNTFHLWLRPGQEIMKLHGDLHDFMQWKGPILTDSGGFQVFSLGDIR
                     KITEQGVHFRNPINGDPIFLDPEKSMEIQYDLGSDIVMIFDECTPYPADWDYAKRSME
                     MSLRWAKRSRERFDSLGNKNALFGIIQGSVYEDLRDISVKGLVDIGFDGYAVGGLAVG
                     EPKADMHRILEHVCPQIPADKPRYLMGVGKPEDLVEGVRRGIDMFDCVMPTRNARNGH
                     LFVTDGVVKIRNAKYKSDTGPLDPECDCYTCRNYSRAYLHHLDRCNEILGARLNTIHN
                     LRYYQRLMAGLRKAIEEGKLESFVTDFYQRQGREVPPLNVD"
     gene            34286..34618
                     /gene="yajC"
                     /locus_tag="JN001_000118"
     CDS             34286..34618
                     /gene="yajC"
                     /locus_tag="JN001_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000007628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HAY9051466.1"
                     /translation="MSFFISDAVAATGAPAQGSPMSLILMLVVFGLIFYFMILRPQQK
                     RTKEHKKLMDSIAKGDEVLTNGGLVGRVTKVAENGYIAIALNDTTEVVIKRDFVAAVL
                     PKGTMKAL"
     gene            34646..36493
                     /gene="secD"
                     /locus_tag="JN001_000119"
     CDS             34646..36493
                     /gene="secD"
                     /locus_tag="JN001_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HAY9051467.1"
                     /translation="MLNRYPLWKYVMLIVVIVIGLLYALPNLFGEDPAVQITGARGVA
                     ASEQTLIQVQKTLQEEKITAKSVALEEGAILARFDSTDTQLRAREALMGVMGDKYVVA
                     LNLAPATPRWLAAIHAEPMKLGLDLRGGVHFLMEVDMDTALGKLQEQNIDSLRSDLRE
                     KGIPYTTVRKENNYGLSITFRDAKARDEAIAYLSKRHPDLVISSQGSNQLRAVMSDAR
                     LSEAREYAVQQNINILRNRVNQLGVAEPVVQRQGADRIVVELPGIQDTARAKEILGAT
                     ATLEFRLVNTNVDQAAAASGRVPGDSEVKQTREGQPVVLYKRVILTGDHITDSTSSQD
                     EYNQPQVNISLDSAGGNIMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAVLVKQEEV
                     INIANIQSRLGNSFRITGINNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGMQNI
                     EQGLEACLAGLLVSILFMIIFYKKFGLIATSALIANLILIVGIMSLLPGATLSMPGIA
                     GIVLTLAVAVDANVLINERIKEELSNGRTVQQAIDEGYRGAFSSIFDANITTLIKVII
                     LYAVGTGAIKGFAITTGIGVATSMFTAIVGTRAIVNLLYGGKRVKKLSI"
     gene            36504..37475
                     /gene="secF"
                     /locus_tag="JN001_000120"
     CDS             36504..37475
                     /gene="secF"
                     /locus_tag="JN001_000120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HAY9051468.1"
                     /translation="MAQEYTVEQLNHGRKVYDFMRWDYWAFGISGLLLIAAIVIMGVR
                     GFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNFGSSHDIMVRMPPAE
                     GETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLTQTGAMALMAALLSILVY
                     VGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIGYSLNDSIVVS
                     DRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGPVLEGFSLT
                     MLIGVSIGTASSIYVASALALKLGMKREHMLQQKVEKEGADQPSILP"
     gene            37604..37951
                     /locus_tag="JN001_000121"
     CDS             37604..37951
                     /locus_tag="JN001_000121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH nuclease family protein"
                     /protein_id="HAY9051469.1"
                     /translation="MAIIPKNYARLESGYREKALKIYPWVCGRCSREFVYSNLRELTV
                     HHIDHDHTNNPEDGSNWELLCLYCHDHEHSKYTEADQYGTTVIAGEDAQKDVGEAKYN
                     PFADLKAMMNKKK"
     gene            complement(38128..39012)
                     /locus_tag="JN001_000122"
     CDS             complement(38128..39012)
                     /locus_tag="JN001_000122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-specific channel-forming protein Tsx"
                     /protein_id="HAY9051470.1"
                     /translation="MKKTLLAAGAVLALSSSFTVNAAENDKPQYLSDWWHQSVNVVGS
                     YHTRFGPQIRNDTYLEYEAFAKKDWFDFYGYADAPVFFGGNSDAKGIWNHGSPLFMEI
                     EPRFSIDKLTNTDLNFGPFKEWYFANNYIYDMGRNKNGRQSTWYMGLGTDIDTGLPMS
                     LSMNVYAKYQWQNYGAANENEWDGYRFKIKYFVPITDLWGGQLSYIGFTNFDWGSDLG
                     DDSGNAINGIKTRTNNSIASSHILALNYDHWHYSVVARYWHDGGQWNDDAELNFGNGN
                     FNVRSTGWGGYLVVGYNF"
     gene            complement(39311..39850)
                     /locus_tag="JN001_000123"
     CDS             complement(39311..39850)
                     /locus_tag="JN001_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3251 domain-containing protein"
                     /protein_id="HAY9051471.1"
                     /translation="MNTNVFRLLLLGSLFSLSACVQQSEVRQMKHSVSTLNQEMTQLN
                     QETVKITQQNRLNAKSSSGGYLLPGAKTPARLESQIGTLRMSLVNITPDTDGTTLTLR
                     IQGESNDPLPAFSGTVEYGQIQGTIDNFQEINVQNQLINAPASVLAPSDVDIPLQLKG
                     ISVDQLGFVRIHDIQPVMQ"
     gene            40001..40450
                     /gene="nrdR"
                     /locus_tag="JN001_000124"
     CDS             40001..40450
                     /gene="nrdR"
                     /locus_tag="JN001_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HAY9051472.1"
                     /translation="MHCPFCFAVDTKVIDSRLVGEGSSVRRRRQCLVCNERFTTFEVA
                     ELVMPRVVKSNDVREPFNEEKLRSGMLRALEKRPVSSDDVEMAINHIKSQLRATGERE
                     VPSKMIGNLVMEQLKKLDKVAYIRFASVYRSFEDIKEFGEEIARLED"
     gene            40454..41557
                     /gene="ribD"
                     /locus_tag="JN001_000125"
     CDS             40454..41557
                     /gene="ribD"
                     /locus_tag="JN001_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HAY9051473.1"
                     /translation="MQDEYYMARALKLAQRGRFTTHPNPNVGCVIVKDGEIVGEGYHQ
                     RAGEPHAEVHALRMAGEKAKGATAYVTLEPCSHHGRTPPCCDALIAAGVARVVASMQD
                     PNPQVAGRGLYRLQQAGIDVSHGLMMSEAEQLNKGFLKRMRTGFPYIQLKLGASLDGR
                     TAMASGESQWITSPQARRDVQRLRAQSHAILTSSATVLADDPALTVRWSELDEQTQAL
                     YPQQNLRQPVRIVIDSQNRVTPEHHIVQQPGETWFARTQEDSREWPETVRTLLIPEHK
                     GHLDLVVLMMQLGKQQINSIWGEAGPTLAGALLQAGLVDELIVYIAPKLLGSDARGLC
                     TLPGLEKLADAPQFKFKEIRHVGPDVCLHLVGA"
     gene            41646..42116
                     /gene="ribE"
                     /locus_tag="JN001_000126"
     CDS             41646..42116
                     /gene="ribE"
                     /locus_tag="JN001_000126"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HAY9051474.1"
                     /translation="MNIIEANVATPDARVAITIARFNNFINDSLLEGAIDALKRIGQV
                     KDENITVVWVPGAYELPLAAGALAKTGKYDAVIALGTVIRGGTAHFEYVAGGASNGLA
                     HVAQDSEIPVAFGVLTTESIEQAIERAGTKAGNKGAEAALTALEMINVLKAIKA"
     gene            42136..42555
                     /gene="nusB"
                     /locus_tag="JN001_000127"
     CDS             42136..42555
                     /gene="nusB"
                     /locus_tag="JN001_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HAY9051475.1"
                     /translation="MKPAARRRARECAVQALYSWQLSQNDIADVEYQFLAEQDVKDVD
                     VLYFRELLAGVATNTAYLDGLMKPYLSRLLEELGQVEKAVLRIALYELSKRSDVPYKV
                     AINEAIELAKSFGAEDSHKFVNGVLDKAAPVIRPNKK"
     gene            42633..43610
                     /gene="thiL"
                     /locus_tag="JN001_000128"
     CDS             42633..43610
                     /gene="thiL"
                     /locus_tag="JN001_000128"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HAY9051476.1"
                     /translation="MACGEFSLIARYFDRVRSSRLDVELGIGDDCALLNIPEKQTLAI
                     STDTLVAGNHFLPDIDPADLAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLES
                     FSDSLFDLLNYYDMQLIGGDTTRGPLSMTLGIHGFVPMGRALTRSGAKPGDWIYVTGT
                     PGDSAAGLAILQNRLQVADAKDADYLIKRHLRPSPRILQGQALRDLANSAIDLSDGLI
                     SDLGHIVKASDCGVRIDLALLPFSDALSRHVEPEQALRWALSGGEDYELCFTVPELNR
                     GALDVALGHLGVPFTCIGQMTADIEGLCFIRDGEPVTLDWKGYDHFATP"
     gene            43588..44106
                     /gene="pgpA"
                     /locus_tag="JN001_000129"
     CDS             43588..44106
                     /gene="pgpA"
                     /locus_tag="JN001_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HAY9051477.1"
                     /translation="MTILPRHKDVAKSRLKMSNPWHLLAVGFGSGLSPIVPGTMGSLA
                     AIPFWYLMTFLPWQLYSLVVMLGICIGVYLCHQTAKDMGVHDHGSIVWDEFIGMWITL
                     MALPTNDWQWVAAGFVIFRILDMWKPWPIRWFDRNVHGGMGIMIDDIVAGVISAGILY
                     FIGHHWPLGILS"
     gene            complement(44160..45134)
                     /gene="yajO"
                     /locus_tag="JN001_000130"
     CDS             complement(44160..45134)
                     /gene="yajO"
                     /locus_tag="JN001_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414953.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxyxylulose-5-phosphate synthase YajO"
                     /protein_id="HAY9051478.1"
                     /translation="MQYNPLGKTDLRVSRLCLGSMTFGEPDRGNHAWTLPEESSRPII
                     KRALEGGINFFDTANSYSDGSSEEIVGRALRDFARREDVVVATKVFHRVGDLPEGLSR
                     AQILRSIDDSLRRLGMDYVDILQIHRWDYNTPIEETLEALNDVVKAGKARYIGASSMH
                     ASQFAQALELQKQHGWAQFVSMQDHYNLIYREEEREMLPLFYQEGVAVIPWSPLARGR
                     LTRPWGETTARLVSDEVGKNLYKESDENDAQIAERLTGVSEELGATRAQVALAWLLSK
                     PGIAAPIIGTSREEQLDELLNAVDITLKPEQIAELETPYKPHPVVGFK"
     gene            complement(45189..47051)
                     /gene="dxs"
                     /locus_tag="JN001_000131"
     CDS             complement(45189..47051)
                     /gene="dxs"
                     /locus_tag="JN001_000131"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HAY9051479.1"
                     /translation="MSFDIAKYPTLALVDSTQELRLLPKESLPKLCDELRRYLLDSVS
                     RSSGHFASGLGTVELTVALHYVYNTPFDQLIWDVGHQAYPHKILTGRRDKIGTIRQKG
                     GLHPFPWRGESEYDVLSVGHSSTSISAGIGIAVAAEKEGKNRRTVCVIGDGAITAGMA
                     FEAMNHAGDIRPDMLVVLNDNEMSISENVGALNNHLAQLLSGKLYSSLREGGKKVFSG
                     VPPIKELLKRTEEHIKGMVVPGTLFEELGFNYIGPVDGHDVLGLITTLKNMRDLKGPQ
                     FLHIMTKKGRGYEPAEKDPITFHAVPKFDPSSGCLPKSSGGLPSYSKIFGDWLCETAA
                     KDNKLMAITPAMREGSGMVEFSRKFPDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAIY
                     STFLQRAYDQVLHDVAIQKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMT
                     PSDENECRQMLYTGYHYNDGPSAVRYPRGNAVGVELTPLEKLPIGKGIVKRRGEKLAI
                     LNFGTLMPEAAKVAESLNATLVDMRFVKPLDEALILEMAASHEALVTVEENAIMGGAG
                     SGVNEVLMAHRKPVPVLNIGLPDFFIPQGTQEEMRAELGLDAAGMEAKIKAWLA"
     gene            complement(47076..47975)
                     /gene="ispA"
                     /locus_tag="JN001_000132"
     CDS             complement(47076..47975)
                     /gene="ispA"
                     /locus_tag="JN001_000132"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl diphosphate synthase"
                     /protein_id="HAY9051480.1"
                     /translation="MDFPQQLEACVKQANQALSRFIAPLPFQNTPVVETMQYGALLGG
                     KRLRPFLVYATGHMFGVSTNTLDAPAAAVECIHAYSLIHDDLPAMDDDDLRRGLPTCH
                     VKFGEANAILAGDALQTLAFSILSDADMPEVSDRDRISMISELASASGIAGMCGGQAL
                     DLDAEGKHVPLDALERIHRHKTGALIRAAVRLGALSAGDKGRRALPVLDKYAESIGLA
                     FQVQDDILDVVGDTATLGKRQGADQQLGKSTYPALLGLEQARKKARDLIDDARQSLKQ
                     LAEQSPDTSALEALADYIIQRNK"
     gene            complement(47975..48217)
                     /gene="xseB"
                     /locus_tag="JN001_000133"
     CDS             complement(47975..48217)
                     /gene="xseB"
                     /locus_tag="JN001_000133"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015571292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HAY9051481.1"
                     /translation="MPKKNEAPASFEKALSELEQIVTRLESGDLPLEEALNEFERGVQ
                     LARQGQAKLQQAEQRVQILLSDNEDASLTPFTPDNE"
     gene            48423..49871
                     /gene="thiI"
                     /locus_tag="JN001_000134"
     CDS             48423..49871
                     /gene="thiI"
                     /locus_tag="JN001_000134"
                     /EC_number="2.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HAY9051482.1"
                     /translation="MKFIIKLFPEITIKSQSVRLRFIKILTGNIRNVLKHYDETLAVV
                     RHWDNIEVRAKDENQRLAIRDALTRIPGIHHILEVEDVPFTDMHDIFEKALVQYRDQL
                     EGKTFCVRVKRRGKHDFSSIDVERYVGGGLNQHIESARVKLTNPEVTVHLEVEDDRLL
                     LIKGRYEGIGGFPIGTQEDVLSLISGGFDSGVSSYMLMRRGCRVHYCFFNLGGAAHEI
                     GVRQVAHYLWNRFGSSHRVRFVAINFEPVVGEILEKIDDGQMGVILKRMMVRAASKVA
                     ERYGVQALVTGEALGQVSSQTLTNLRLIDNVSDTLILRPLISYDKEHIINLARQIGTE
                     DFARTMPEYCGVISKSPTVKAVKSKIEAEEEKFDFSILDKVVEEANNVDIREIALQTE
                     QEVVEVETVNGFGPNDVILDIRSIDEQEDKPLKVEGIDVVSLPFYKLSTKFGDLDQNR
                     TWLLWCERGVMSRLQALYLREQGFNNVKVYRP"
     gene            complement(49925..50515)
                     /gene="yajL"
                     /locus_tag="JN001_000135"
     CDS             complement(49925..50515)
                     /gene="yajL"
                     /locus_tag="JN001_000135"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein deglycase YajL"
                     /protein_id="HAY9051483.1"
                     /translation="MSASALVCLAPGSEETEAVTTIDLLVRGGIKVTTASVASDGNLA
                     ITCSRGVKLLADAPLVEVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIV
                     AAICAAPATVLVPHDIFPIGNMTGFPTLKDKIPAEQWQDKRVVWDARVKLLTSQGPGT
                     AIDFGLKIIDLQVGREKAHEVASQLVMAAGIYNYYE"
     gene            complement(50478..51389)
                     /gene="panE"
                     /locus_tag="JN001_000136"
     CDS             complement(50478..51389)
                     /gene="panE"
                     /locus_tag="JN001_000136"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HAY9051484.1"
                     /translation="MKITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSANLVET
                     DGSIFNESLTANDPDFLATSDLLLVTLKAWQVSDAVKSLASTLPVTTPILLIHNGMGT
                     IEELQNIQQPLLMGTTTHAARRDGNVIIHVANGITHIGPARQQDGDYSYLADILQTVL
                     PDVAWHNNIRAELWRKLAVNCVINPLTAIWNCPNGELRHHPQEIMQICEEVAAVIERE
                     GHHTSAEDLRDYVMQVIDATAENISSMLQDIRALRHTEIDYINGFLLRRARAHGIAVP
                     ENTRLFEMVKRKESEYERIGTGLPRPW"
     gene            51557..52048
                     /gene="yajQ"
                     /locus_tag="JN001_000137"
     CDS             51557..52048
                     /gene="yajQ"
                     /locus_tag="JN001_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414960.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide binding protein YajQ"
                     /protein_id="HAY9051485.1"
                     /translation="MPSFDIVSEVDLQEARNAVDNASREVESRFDFRNVEASFELNDA
                     SKTIKVLSESDFQVNQLLDILRAKLLKRGIEGSSLDVPENIVHSGKTWFVEAKLKQGI
                     ESATQKKIVKMIKDSKLKVQAQIQGDEIRVTGKSRDDLQAVMAMVRGGDLGQPFQFKN
                     FRD"
     gene            complement(52176..53540)
                     /locus_tag="JN001_000138"
     CDS             complement(52176..53540)
                     /locus_tag="JN001_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308508.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9051486.1"
                     /translation="MNDYKMTPGERRATWGLGTVFSLRMLGMFMVLPVLTTYGMALQG
                     ASEALIGIAIGIYGLTQAVFQIPFGLLSDRIGRKPLIVGGLAVFAAGSVIAALSDSIW
                     GIILGRALQGSGAIAAAVMALLSDLTREQNRTKAMAFIGVSFGITFAIAMVLGPIITH
                     KLGLHALFWMIAILATTGIALTIWVVPNSSTHVLNRESGMVKGSFSKVLAEPRLLKLN
                     FGIMCLHILLMSTFVALPGQLADAGFPAAEHWKVYLATMLIAFGSVVPFIIYAEVKRK
                     MKQVFVFCVGLIVVAEIVLWNAQTQFWQLVVGVQLFFVAFNLMEALLPSLISKESPAG
                     YKGTAMGVYSTSQFLGVAIGGSLGGWIDGMFDGQGVFLAGAMLAAVWLAVASTMKEPA
                     YVSSLRIEIPANIAANEALKVRLLETEGIKEVLIAEEEHSAYVKIDSKVTNRFDVEQA
                     IRQA"
     gene            complement(53689..54579)
                     /gene="cyoE"
                     /locus_tag="JN001_000139"
     CDS             complement(53689..54579)
                     /gene="cyoE"
                     /locus_tag="JN001_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HAY9051487.1"
                     /translation="MMFKQYLQVTKPGIIFGNLISVIGGFLLASKGSIDYPLFIYTLV
                     GVSLVVASGCVFNNYIDRDIDRKMERTKNRVLVKGLISPAVSLVYATLLGIAGFMLLW
                     FGANPLACWLGVMGFVVYVGVYSLYMKRHSVYGTLIGSLSGAAPPVIGYCAVTGEFDS
                     GAAILLAIFSLWQMPHSYAIAIFRFKDYQAANIPVLPVVKGISVAKNHITLYIIAFAV
                     ATLMLSLGGYAGYKYLVVAAAVSVWWLGMALRGYKVADDRIWARKLFGFSIIAITALS
                     VMMSVDFMVPDSHTLLAAVW"
     gene            complement(54591..54920)
                     /locus_tag="JN001_000140"
     CDS             complement(54591..54920)
                     /locus_tag="JN001_000140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit IV"
                     /protein_id="HAY9051488.1"
                     /translation="MSHSTDHSGASHGSVKTYMTGFILSIILTVIPFWMVMTGAASPA
                     VILGTILAMAVVQVLVHLVCFLHMNTKSDEGWNMTAFVFTVLIIAILVVGSIWIMWNL
                     NYNMMMH"
     gene            complement(54920..55534)
                     /locus_tag="JN001_000141"
     CDS             complement(54920..55534)
                     /locus_tag="JN001_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit III"
                     /protein_id="HAY9051489.1"
                     /translation="MATDTLTHATAHAHEHGHHDAGGTKIFGFWIYLMSDCILFSILF
                     ATYAVLVNGTAGGPTGKDIFELPFVLVETFLLLFSSITYGMAAIAMYKNNKSQVISWL
                     ALTCLFGAGFIGMEIYEFHHLIVNGMGPDRSGFLSAFFALVGTHGLHVTSGLIWMAVL
                     MVQIARRGLTSTNRTRIMCLSLFWHFLDVVWICVFTVVYLMGAM"
     gene            complement(55524..57515)
                     /gene="cyoB"
                     /locus_tag="JN001_000142"
     CDS             complement(55524..57515)
                     /gene="cyoB"
                     /locus_tag="JN001_000142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002444673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit I"
                     /protein_id="HAY9051490.1"
                     /translation="MFGKLSLDAVPFHEPIVMVTIAGIILGGLALVGLITYFGKWTYL
                     WKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQI
                     FTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNVSL
                     GVGEFAQTGWLAYPPLSGIEYSPGVGVDYWIWSLQLSGIGTTLTGINFFVTILKMRAP
                     GMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYI
                     NLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHH
                     FFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMLWTIGFIVTFS
                     VGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNE
                     TWGKRAFWFWIIGFFVAFMPLYALGFMGMTRRLSQQIDPQFHTMLMIAASGAVLIALG
                     ILCLVIQMYVSIRDRDQNRDLTGDPWGGRTLEWANSSPPPFYNFAVVPHVHERDAFWE
                     MKEKGEAYKKPDHYEEIHMPKNSGAGIVIAAFSTIFGFAMIWHIWWLAIVGFAGMIIT
                     WIVKSFDEDVDYYVPVAEIEKLENQHFDEITKAGLKNGN"
     gene            complement(57537..58484)
                     /gene="cyoA"
                     /locus_tag="JN001_000143"
     CDS             complement(57537..58484)
                     /gene="cyoA"
                     /locus_tag="JN001_000143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome o ubiquinol oxidase subunit II"
                     /protein_id="HAY9051491.1"
                     /translation="MRLRKYNKSLGWLSLFAGTVLLSGCNSALLDPKGQIGLEQRSLI
                     LTAFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPILIIIF
                     LAVLTWKTTHALEPSKPLAHDEKPITIEVVSMDWKWFFIYPEQGIATVNEIAFPANTP
                     VYFKVTSNSVMNSFFIPRLGSQIYAMAGMQTRLHLIANEPGTYDGISASYSGPGFSGM
                     KFKAIATPDRAEFDQWVAKAKQSPNTMSDMAAFEKLAAPSEYNQVEYFSNVKPDLFAD
                     VINKFMAHGKSMDMTQPEGEHSAHEGMEGMDMSHAESAH"
     gene            complement(58945..60420)
                     /gene="ampG"
                     /locus_tag="JN001_000144"
     CDS             complement(58945..60420)
                     /gene="ampG"
                     /locus_tag="JN001_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muropeptide MFS transporter AmpG"
                     /protein_id="HAY9051492.1"
                     /translation="MSSQYLRIFQQPRSAILLILGFASGLPLALTSGTLQAWMTVENI
                     DLKTIGFFSLVGQAYVFKFLWSPLMDRYTPPFFGRRRGWLLATQILLLVAIAAMGFLE
                     PGTQLRWMAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLGMLVSG
                     GLALWLADKWLGWQGMYWLMAALLIPCIIATLLAPEPTDTIPVPKTLEQAVVAPLRDF
                     FGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGVVNKTLGLLATIVGA
                     LYGGILMQRLSLFRALLIFGILQGASNAGYWLLSITDKHLYSMGAAVFFENLCGGMGT
                     SAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWSTFYLFSVAAA
                     VPGLILLLVCRQTLEYTRVNDNFISRTEYPAGYAFAMWTLAAGVSLLAVWLLLLTMDA
                     LDLTHFSFLPALLEVGVLVALSGVVLGGLLDYLALRKTHLT"
     gene            complement(60464..61042)
                     /locus_tag="JN001_000145"
     CDS             complement(60464..61042)
                     /locus_tag="JN001_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9051493.1"
                     /translation="MFKKILFPLVALFMLAGCAKPPTTIEVSPTITLPQQDPSLMGVT
                     VSINGADQRTDQALAKVTRDNQIVTLAASRDLRFLLQEVLEKQMTARGYMVGPNGPVN
                     LQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKITKNYRASYNVEGAFQASNK
                     NIADAVNSVLTDTIADMSQDTSIHEFIKQNAR"
     gene            61347..61664
                     /gene="bolA"
                     /locus_tag="JN001_000146"
     CDS             61347..61664
                     /gene="bolA"
                     /locus_tag="JN001_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414969.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator BolA"
                     /protein_id="HAY9051494.1"
                     /translation="MMIRERIEEKLRAAFQPVFLEVVDESYRHNVPAGSESHFKVVLV
                     SDRFTGERFLNRHRMIYSTLAEELSTTVHALALHTYTIKEWEGLQDTVFASPPCRGAG
                     SIA"
     gene            62008..63306
                     /gene="tig"
                     /locus_tag="JN001_000147"
     CDS             62008..63306
                     /gene="tig"
                     /locus_tag="JN001_000147"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001716227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HAY9051495.1"
                     /translation="MQVSVETTQGLGRRVTITIAADSIETAVKSELVNVAKKVRIDGF
                     RKGKVPMNIVAQRYGASVRQDVLGDLMSRNFIDAIIKEKINPAGAPTYVPGEYKLGED
                     FTYSVEFEVYPEVELQGLEAIEVEKPIVEVTDADVDGMLDTLRKQQATWKEKDSAVEA
                     EDRVTIDFTGSVDSEEFEGGKASDFVLAMGQGRMIPGFEDGIKGHKAGEEFTIDVTFP
                     EEYHAENLKGKAAKFAINLKKVEERELPELTAEFIKRFGVEDGSVEGLRAEVRKNMER
                     ELKSAIRNRVKSQAIEGLVKANDIDVPAALIDSEIDVLRRQAAQRFGGNEKQALELPR
                     ELFEEQAKRRVVVGLLLGEVIRTNELKADEERVKGLIEEMASAYEDPKEVIEFYSKNK
                     ELMDNMRNVALEEQAVEAVLAKAKVTEKETTFNELMNQQA"
     gene            63551..64174
                     /gene="clpP"
                     /locus_tag="JN001_000148"
     CDS             63551..64174
                     /gene="clpP"
                     /locus_tag="JN001_000148"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HAY9051496.1"
                     /translation="MSYSGERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF
                     LTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVS
                     TICMGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVK
                     GRMNELMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN"
     gene            64300..65574
                     /gene="clpX"
                     /locus_tag="JN001_000149"
     CDS             64300..65574
                     /gene="clpX"
                     /locus_tag="JN001_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HAY9051497.1"
                     /translation="MTDKRKDGSGKLLYCSFCGKSQHEVRKLIAGPSVYICDECVDLC
                     NDIIREEIKEVAPHRERSALPTPHEIRNHLDDYVIGQEQAKKVLAVAVYNHYKRLRNG
                     DTSNGVELGKSNILLIGPTGSGKTLLAETLARLLDVPFTMADATTLTEAGYVGEDVEN
                     IIQKLLQKCDYDVQKAQRGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGT
                     VAAVPPQGGRKHPQQEFLQVDTSKILFICGGAFAGLDKVISHRVETGSGIGFGATVKA
                     KSDKASEGELLAQVEPEDLIKFGLIPEFIGRLPVVATLNELSEEALIQILKEPKNALT
                     KQYQALFNLEGVDLEFRDEALDAIAKKAMARKTGARGLRSIVEAALLDTMYDLPSMED
                     VEKVVIDESVIDGQSKPLLIYGKPEAQQASGE"
     gene            65762..68116
                     /gene="lon"
                     /locus_tag="JN001_000150"
     CDS             65762..68116
                     /gene="lon"
                     /locus_tag="JN001_000150"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HAY9051498.1"
                     /translation="MNPERSERIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAM
                     DHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGTVKVLVEGLQRARISA
                     LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSID
                     DPARLADTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK
                     KQMEKSQREYYLNEQMKAIQKELGEMDDAPDENEALKRKIDAAKMPKEAKEKAEAELQ
                     KLKMMSPMSAEATVVRGYIDWMVQVPWNARSKVKKDLRQAQEILDTDHYGLERVKDRI
                     LEYLAVQSRVNKIKGPILCLVGPPGVGKTSLGQSIAKATGRKYVRMALGGVRDEAEIR
                     GHRRTYIGSMPGKLIQKMAKVGVKNPLFLLDEIDKMSSDMRGDPASALLEVLDPEQNV
                     AFSDHYLEVDYDLSDVMFVATSNSMNIPAPLLDRMEVIRLSGYTEDEKLNIAKRHLLP
                     KQIERNALKKGELTVDDSAIIGIIRYYTREAGVRGLEREISKLCRKAVKQLLLDKSLK
                     HIEINGDNLHDYLGVQRFDYGRADNENCVGQVTGLAWTEVGGDLLTIETACVPGKGKL
                     TYTGSLGEVMQESIQAALTVVRARAEKLGINPDFYEKRDIHVHVPEGATPKDGPSAGI
                     AMCTALVSCLTGNPVRADVAMTGEITLRGQVLPIGGLKEKLLAAHRGGIKTVLIPFEN
                     KRDLEEIPDNVIADLDIHPVKRIEEVLTLALQNEPSGMQVVTAK"
     gene            68325..68597
                     /gene="hupB"
                     /locus_tag="JN001_000151"
     CDS             68325..68597
                     /gene="hupB"
                     /locus_tag="JN001_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-beta"
                     /protein_id="HAY9051499.1"
                     /translation="MNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVAL
                     VGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN"
     gene            68789..70660
                     /gene="ppiD"
                     /locus_tag="JN001_000152"
     CDS             68789..70660
                     /gene="ppiD"
                     /locus_tag="JN001_000152"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY9051500.1"
                     /translation="MMDSLRTAANSLVLKIIFGIIIVSFILTGVSGYLIGGGNNYAAK
                     VNDQEISRGQFENAFNSERNRMQQQLGDQYSELAANEGYMKTLRQQVLNRLIDEALLD
                     QYARELKLGISDEQVKQAIFATPAFQVDGKFDNSRYNGILNQMGMTADQYAQALRNQL
                     TTQQLINGVAGTDFMLKGETDELAALVAQQRVVREATIDVNALAAKQPVTEQEIASYY
                     EQNKNNFMTPEQFRVSYIKLDAATMQQPVSDADIQSYYDQHQDQFTQPQRTRYSIIQT
                     KTEDEAKAVLDELNKGGDFAALAKEKSADIISARNGGDMGWLEDATIPDELKNAGLKE
                     KGQLSGVIKSSVGFLIVRLDDIQPAKVKSLDEVRDDIAAKVKHEKALDAYYALQQKVS
                     DAASNDTESLAGAEQAAGVKATQTGWFSKDNLPEELNFKPVADAIFNGGLVGENGAPG
                     INSDIITVDGDRAFVLRISEHKPEAVKPLADVQEQVKALVQHNKAEQQAKVDAEKLLV
                     DLKAGKGAEAMQAAGLKFGEPKTLSRSGRDPISQAAFALPLPAKDKPSYGMATDMQGN
                     VVLLALDEVKQGSMPEDQKKAMVQGITQNNAQIVFEALMSNLRKEAKIKIGDALEQQ"
     gene            70811..71182
                     /locus_tag="JN001_000153"
     CDS             70811..71182
                     /locus_tag="JN001_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051501.1"
                     /translation="MKHGIKALLITLSLACAGMSHSALAAASVAKPTAVETKAEAPAA
                     QSKAAVPAKASDEEGTRVSINNASAEELARAMNGVGLKKAQAIVSYREEYGPFKTVED
                     LKQVPGMGNSLVERNLAVLTL"
     gene            71276..71674
                     /locus_tag="JN001_000154"
     CDS             71276..71674
                     /locus_tag="JN001_000154"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgC/FadM family acyl-CoA thioesterase"
                     /protein_id="HAY9051502.1"
                     /translation="MQTQIKVRGYHLDVYQHVNNARYLEFLEEARWDGLENSDSFQWM
                     TAHNIAFVVVNININYRRPAVLSDLLTITSQLQQLNGKSGILSQVITLEPEGQVVADA
                     LITFVCIDLKTQKALALEGELREKLEQMVK"
     gene            complement(71726..72421)
                     /gene="queC"
                     /locus_tag="JN001_000155"
     CDS             complement(71726..72421)
                     /gene="queC"
                     /locus_tag="JN001_000155"
                     /EC_number="6.3.4.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine synthase QueC"
                     /protein_id="HAY9051503.1"
                     /translation="MKRAVVVFSGGQDSTTCLVQALQQYDEVHCVTFDYGQRHRAEID
                     VARELALKLGARAHKVLDVTLLNELAVSSLTRDSIPVPDYEPEADGIPNTFVPGRNIL
                     FLTLAAIYAYQVKAEAVITGVCETDFSGYPDCRDEFVKALNHAVSLGMAKDIRFETPL
                     MWIDKAETWALADYYGKLDLVRNETLTCYNGIKGDGCGHCAACNLRANGLNHYLADKP
                     TVMAAMKQKTGLR"
     gene            complement(72486..74186)
                     /locus_tag="JN001_000156"
     CDS             complement(72486..74186)
                     /locus_tag="JN001_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HAY9051504.1"
                     /translation="MRLLNRLNQYQRLWQPSAGKPQTVTVSELAERCFCSERHVRTLL
                     RQAQEAGWLEWQAQSGRGKRGQLRFLVTPESLRNAMMEQALETGKQQDVLELAQLAPG
                     ELRTLLQPFMGGQWQNDTPTLRIPYYRPLEPLQPGFLPGRAEQHLAGQIFSGLTRFDN
                     NTQRPIGDLAHHWETSTDGLRWDFYLRSTLHWHNGDAVKASHLHQRLLMLLQLPALDQ
                     LFISVKRIEVTHPQCLTFFLHRPDYWLAHRLASYCSHLAHPQFPLIGTGPFRLTQFTA
                     ELVRLESHDYYHLRHPLLKAVEYWITPPLFEKDLGTSCRHPVQITIGKPEELQRVSQV
                     SSGISLGFCYLTLRKSPRLSLWQARKVISIIHQSGLLQTLEVGENLITASHALLPGWT
                     IPHWQVPDEVKLPKTLTLVYHLPIELHTMAERLQATLAAEGCELTIIFHNAKNWDDTT
                     LLAHADLMMGDRLIGEAPEYTLEQWLRCDPLWPHVFDAPAYAHLQSTLDAVQVMPDEE
                     NRFNALKAVFSQLMADATLTPLFNYHYRISAPPGVNGVRLTPRGWFEFTEAWLPAPSQ
                     "
     gene            74286..75068
                     /gene="cof"
                     /locus_tag="JN001_000157"
     CDS             74286..75068
                     /gene="cof"
                     /locus_tag="JN001_000157"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HMP-PP phosphatase"
                     /protein_id="HAY9051505.1"
                     /translation="MARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATGR
                     HALEMQHILGALSLDAYLITGNGTRVHSLEGELLHRDDLPADVAELVLYQQWDTRASM
                     HIFNDDGWFTGKEIPALLQAFVYSGFRYQIIDVKKMPLGSVTKICFCGDHDDLTRLQI
                     QLYEALGERAHLCFSATDCLEVLPVGCNKGAALTVLTQHLGLSLRDCMAFGDAMNDRE
                     MLGSVGSGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTH"
     gene            75170..75715
                     /locus_tag="JN001_000158"
     CDS             75170..75715
                     /locus_tag="JN001_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706341.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC family transcriptional regulator"
                     /protein_id="HAY9051506.1"
                     /translation="MVFKPHRINCRDFTFKIELKEKKILCGRAMLDKIDRKLLALLQQ
                     DCTLSLQALAEAVNLTTTPCWKRLKRLEDDGILIGKVALLDPEKIGLGLTAFVLIKTQ
                     HHSSEWYCRFVTVVTEMPEVLGFWRMAGEYDYLMRVQVADMKRYDEFYKRLVNSVPGL
                     SDVTSSFAMEQIKYTTSLPIE"
     gene            75745..>77378
                     /locus_tag="JN001_000159"
     CDS             75745..>77378
                     /locus_tag="JN001_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdA family multidrug ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY9051507.1"
                     /translation="MRLFAQLSWYFRREWRRYLGAVALLVIIAMLQLVPPKVVGIVVD
                     GVTEQHFTTGQILMWIATMVLIAVVVYFLRYVWRVLLFGASYQLAVELREDYYRQLSR
                     QHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIMMSTQISWQL
                     TLFALLPMPVMAIMIKRNGDALHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDR
                     QSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVQGSLTLGQ
                     LTSFMMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVNDGSEPVPEGRGE
                     LDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGD
                     IRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGCPNATQQEIEHVARLAS
                     VHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTE
                     HQILHNLRQWGQGRTVIISAHRLSALTEASENVMNAS"
BASE COUNT        18894 a        19172 c        20575 g        18737 t
ORIGIN      
        1 aaataatggc tctcaggtaa atgttactga ttcctctctg gtatcagata ccattggttt
       61 aaccaacggt tcttcactga atattggtgc aaatggcgtg gttgctacag accacctgac
      121 tgttgatagc tacagtaccg ttaatttaac cgaatctacc ggttggaata attattctaa
      181 tctgtatacc aatactatca ctgtgactaa cggtggtgtg ctggatgtga atgttgatca
      241 gttcgatact gaagctttcc gtactgataa actggaactg accagcggca acattgctga
      301 ccataatggc aacgtaattt ctggtgtgtt cgacatcaac agcagcgatt acgttctgaa
      361 cgctgatctg gtgaacgacc gtacgtggga tacttccaag tctaactacg gttacggtat
      421 tgttgctatg aactctgatg gtcacctgac tatcaatggt aacggcgacg tagacaacgg
      481 tactgaactg gataacagct ctgttgataa cgttgttgct gcaaccggta actacaaagt
      541 tcgtatcgac aacgcaactg gcgctggcac tatcgctgat tacaaagata aagaacttat
      601 tcgggtaaac gacgctaaca ccaacgcgac cttctctgct gctaacaaag ctgacctggg
      661 tgcatacacc tatcaggctg aacagcgcgg taacaccgtt gttctgcaac agatggagct
      721 gaccgactac gctaacatgg cgctgagcat cccgtctgcg aacaccaata tctggaacct
      781 ggaacaagac accgttggta ctcgtctgac caactctcgt catggcctgg ctgataacgg
      841 cggcgcatgg gtaagctact tcggtggtaa cttcaacggc gacaacggca ccatcaacta
      901 tgatcaggat gttaacggca tcatggtcgg tgttgatacc aaaattgacg gtaacaacgc
      961 taagtggatc gtcggtgcgg ctgcaggctt cgctaaaggt gacatgaatg accgttctgg
     1021 tcaggtggat caagacagcc agactgccta catctactct tctgctcact tcgcgaacaa
     1081 cgtctttgtt gatggtagct tgagctactc tcacttcaac aacgacctgt ctgcaaccat
     1141 gagcaacggt acttacgttg acggtagcac caactctgac gcgtggggct tcggtttgaa
     1201 agccggttac gacttcaaac tgggtgatgc tggttacgag actccttacg gcagcgtttc
     1261 tggtctgttc cagtctggtg atgactacca gctgagcaac gacatgaaag ttgacggtca
     1321 gtcttacgac agcatgcgtt atgaactggg tgtagatgca ggttatacct tcacctacag
     1381 cgaagatcag gctctgactc cgtacttcaa actggcttac gtctacgacg actcaaacaa
     1441 cgataacgat gtgaacggtg attccatcga taacggtact gaagggtctg cggtacgtgt
     1501 tggtctgggt actcagttca gcttcaccaa gaacttcagc gcctataccg atgctaacta
     1561 cctcggtggt ggtgacgtag atcaagactg gtccgcgaac gtgggtgtta aatatacttg
     1621 gtaatattct tcactccgaa gaaattctgg taatttaatc taaataatgc ccgtcaagga
     1681 tttgacgggc attactgcaa aggacgcgca aatgttatct gtagttaaac ctcttcagga
     1741 atttggtaag ctcgataaat gtttgtccag atacggtacg cgcttcgagt ttaataatga
     1801 aaagcaagtt atattttcca gtgatgtcaa tagcgaagat actttcttta ttttagaggg
     1861 cgttatctct ctgcgtagag aagaaaacgt acttatcggt attacccagg cttcttatat
     1921 tatggggctg gctgatggtt taatgaaaaa cgatatacca tacaaattaa tatcagaagg
     1981 aaattgtacg ggatatcatc taccagccaa acaaaccatt acgcttattg aacaaaatca
     2041 actctggcga gacgcttttt actggttagc ctggcaaaat agaattctgg aattacgcga
     2101 cgtgcagctc attgggcata attcctacga acaaatccgc gcaacattat tatcaatgat
     2161 tgactggaat gaagaattgc gatcacgtat tggtgtgatg aattatatcc atcaacgtac
     2221 acgcatatcg cgttctgtcg tcgcagaagt tctcgctgct ttgcgtaaag gcggctatat
     2281 cgaaatgaat aaaggcaaac tggtcgctat caactgtttg ccttcagagt attaatcagg
     2341 atgcagggat aaccaacggt ttattcccgc ttagctcggt caccagatca ttgatgccat
     2401 cgctcatatt tttaaagcgc gtcaacggcg aacgagtgac caccacaaac gcgccaatat
     2461 tcttctgcgg gatcatcgcc atataggtaa tgaaaccgcc accaccgcct gtcttctgaa
     2521 taatccccgg acgaccctct ttcggggcca tatataccca gcctaaacca agcgcatccg
     2581 ctttgccggg gacatccatg ccaatcactt tggtaaactg cgcgcgctga taaatcaacg
     2641 tctgcatgcg atctgcctgg ttactgcgct gataaaaatc agatgataaa tactgctgca
     2701 tccagcgcat catatcgcca ggcgtggaat agacgccgcc gctgccaatt gccgccagcg
     2761 tgttattgca cggactggca ccgcgctcag caaccattaa acggcggcac tgatccggtg
     2821 agggggtgta ggtggtgtct ttcatcccca atggacgggt aatctgctct tcaaacaact
     2881 gggtataagg cttgccggac gcattcgcca gtgcatctgc cagcaggtcg aacgcaaggt
     2941 tagagtacgc cgcctgactg cctggcgcgg ctttcagctt cgccgtagaa aggtatttcc
     3001 agcgttgctc gcgcgttggc cagacaaaca ccggacgatg tgccgcgcca ccgggctgtt
     3061 cacggggcag ggcgctggta tgggttgcca gattcactag ggtaatgggc gtcccattgt
     3121 aggttggcac gcgtgcgcct ggcggagcat atttacttag cggatcgttt aacttcacgg
     3181 tcccctggtc gagcaatttc accagcattt cactggtcat tagcttggtg agggaagcaa
     3241 tacgcacgac cgaatccagc tgcgggcgaa cgttattacc aggtcgcgtt tcgccataac
     3301 tgcgaaagac gcgctggtta ccgtcgataa caaccagcgc catccccgtg gcaccgctgc
     3361 cgtaaaaaat atgatcggca taacgatcga caatatcaga ggcaaactcc ggttcagtga
     3421 tcggctgcgc cgcatggacg gaggtcaatg acgccgcaca cagcacggca gaaaaaagca
     3481 gactacgttt caacggtggt gtccatagat tgaatgaagg taactgagcg tatttatact
     3541 actcattgat ggattgcaaa gggcgaatta gtgcaataat agtgttaaaa acgtaacggc
     3601 gcgtaaacac gatctttttc ctgctcacca atgcctgcat ttgtgatcct gcgcgtgtta
     3661 atccgcttat gtaaacaatc tttggtttgt gaaatccgtc gaaacaattc ttatggtcag
     3721 gctggcgaac taagcgcctt gctatgggtc acaatgggcg gtttcatttg gctgacgctt
     3781 tgtagtggtc atgcggttaa tacacagcag ttgttaaaac gataagaagt tagcaggagt
     3841 gcatatgttt aagtcttttt tcccaaagcc gggagcgttt tttctctcgg cctttgtttg
     3901 ggcattgatt gccgttatct tctggcaagc cggtggggga gactgggtgg cgcgtatcac
     3961 cggcgcttcc gggcagatcc cgattagcgc cgcgcgtttc tggtcgttgg atttcctgat
     4021 tttttacgct tactacattg tttgcgtagg actttttgca tttttctggt ttatctacag
     4081 cccgcaccgt tggcaatact ggtcaatact cggtactgca ctgatcatct tcgtcacctg
     4141 gtttttggtg gaagtcggag tcgccgtcaa cgcctggtat gcaccgttct atgatctgat
     4201 tcaaaccgcg ctaagttcgc cgcataaagt cactatcgaa caattttacc gcgaagtggg
     4261 cgtctttctg gggattgcgc tgatcgcggt ggtgatcagt gtactgaaca acttctttgt
     4321 cagtcactat gtgttccgct ggcgtacggc gatgaacgaa tattacatgg cgaactggca
     4381 acaactgcgt catatcgaag gtgccgcaca gcgtgtgcag gaagacacca tgcgttttgc
     4441 ttcaacgctg gagaatatgg gcgtcagttt tatcaacgcc atcatgacgt tggtcgcctt
     4501 cctgccggtg ctggtaacgc tctccgcgca tgtgccggag ctgccgatta tcgggcacat
     4561 tccgtatggt ctggtgattg ccgctatcgt ctggtcgctg atggggaccg gattgctggc
     4621 agtggtaggg atcaaactgc cggggctgga gtttaaaaac cagcgagtag aggccgccta
     4681 ccgtaaagag ctggtttatg gtgaagacga tgccacgcgc gcgacgccgc ctacggtacg
     4741 cgagctgttt agcgccgtac ggaaaaacta ttttcgcctc tattttcact atatgtattt
     4801 caacatcgcc cgcattctct atttgcaggt cgataacgtt ttcggtttgt tcttgctgtt
     4861 tccgtcaatt gttgccggta cgattacgct cggcctgatg acgcagatta ccaacgtttt
     4921 tggtcaggtt cgcggtgctt tccagtacct gattaactca tggaccacac tggttgagtt
     4981 gatgtctatc tacaaacgtc tgcgcagctt tgaacatgag ctggatggtg acaaaattca
     5041 ggaagtaacc cataccttga gctaaaaagg agaagtaatg tcgcgcgtca atcatctatc
     5101 ttcgctgtca ttgttggcgg ttctggtttt agcggggtgt agtagtcagg ctccgcaacc
     5161 gttgaaaaag ggcgaaaaag cgatagatgt agcgagcgtc gtgcggcaga agatgcctgc
     5221 gagcgtgaaa gaccgcgatg cctgggcgaa agatctcgcc accacctttg aaagtcaggg
     5281 gctggcaccg acgctggaaa acgtctgctc ggtgctggcg gtggcgcagc aggagtcaaa
     5341 ttatcaggca gatccggccg ttccgggctt aagcaagatc gcctggcaag agattgaccg
     5401 tcgtgctgaa cggatgcaca ttcctgcttt tctggttcat accgcgctaa aaatcaaatc
     5461 gccaaacggc aaaagttata gcgaacggtt agattcggtg cgtacagaaa agcaattgag
     5521 cgcgattttt gacgatctga tcagcatggt accaatgggg cagacgctgt ttggttcgct
     5581 taatccggtg cgcaccggtg ggccgatgca ggtcagcatt gcttttgccg aacagcatac
     5641 caaagggtat ccgtggaaaa tggacggtac agttcgtcag gaagtcttca gtcgccgcgg
     5701 cgggttgtgg tttggtactt accatttact gaattatccc gccagctata gcgcaccgat
     5761 ataccgcttt gctgatttta acgctggctg gtacgccagc cgtaatgccg cgtttcagaa
     5821 cgcggtcagt aaggccagcg gcgtgaagct ggcactggac ggtgatttaa ttcgttacga
     5881 cagtaaagaa cccgggaaaa ccgaactggc aacgcgcaaa ctggcgggaa aactggggat
     5941 gagcgacagc gaaattcgcc gtcagttaga gaaaggtgac agcttctctt ttgaggagac
     6001 ggcgctgtac aagaaagttt atcaacttgc cgaagcgaaa acgggtaaat cactaccccg
     6061 cgaaatgttg cctggcattc aactggaaag cccgaaaatc acccgcaacc tgactacggc
     6121 ctggtttgcg aagcgcgtag acgaacggcg ggcgcgttgt atgaaacagt gatcaaacag
     6181 gaatgtcatg ccagataagg cgttttaggc cgtatctggc aacgtaaatc ttactggcgg
     6241 cgatgtcgcc agtgcagcca tagcgccacc actgcaaaaa tgaggcagcc tactaaaaac
     6301 gggatcagcc cgaaaatggt gccgacacct aaaccaattt ccacccgtgg gcgacctgtt
     6361 tcctggacct gcattaaacg ctcatagacg ccgggcgcat gcactaacag gttcagcaat
     6421 tgcgccccag cccaaaagca aaacagcaca aacaacgcat aggcaatgtt gccaggcgtt
     6481 gaagaggcat tgcgatattt tccgctaaac agcgattttg acagggtgaa atcagccata
     6541 aaaacctccg gaagtcatct gcttctcttc tggtgtgata ccagcggctt atggcaagtc
     6601 tgacaggtca tttagattgt caatatcaga atcatggtaa attgatgttg ggaatattcc
     6661 cgaagcgtga atcttcgttg tgagtcacaa aatggcaacc ttaagttaaa tttattaaca
     6721 attacgaaaa tgttgtctac accacagacg gttgttacag aatatgcaag gatgttgttt
     6781 ttcgttaacg gagctgccat gaatctgcct gtaaaaatcc gccgtgactg gcactactat
     6841 gcgttcgcca ttggccttat attcattctt aatggcgtgg tggggttact gggatttgaa
     6901 gcaaaaggtt ggcagaccta tgccgtcggt ctggtgacgt gggtgattag tttctggctg
     6961 gcggggttga ttattcgtcg tcgcgatgaa gaaactgaaa acgcccaata agaatattat
     7021 cgggcgttaa aatattacat tgtggttttc aatgcgttat ccgcagcgtg acgctccagc
     7081 gccagctcaa tcaaacgtgt gatcagatcg gtgtaaccca gaccgctggc ttgccacagc
     7141 ttcggataca tactgatgtt ggtgaagcca ggcagtgtgt tgatctcgtt gatcaccact
     7201 tcgttctctg gggttaaaaa cacgtctaca cgcgccatgc ctgcgcatcc caacgtttga
     7261 taagcctgaa cggcaatcgc ccggatctta tcgttgattt ctggcgcaat ggctgccgga
     7321 actaccactt tcgcgccatc ttcgtcaatg tacttggtgt cgtaggcata gaagtcgctg
     7381 gtgagtacga tctcgccaca ggtgctggct tgcgggttgt cgttgcccag aactgcgcat
     7441 tcgatctcac gacctttgat cccttgctca acgatcactt tatgatcgaa ttcgaacgcc
     7501 agatcgacgg caattgcgta ctgttcttca ctggttactt tgctgacacc aacagaagag
     7561 ccctgattag ccggttttac aaacagtggt aacctcagtt tagactccac ttcggcaaaa
     7621 ctaatgttgt gacgattggc gcgcgtcagg gtaataaatg gcgcaatgtt cagcccggca
     7681 tcgcgcagca gacgtttggt aacatcttta tccatacagg ctgctgaagc cagaacatca
     7741 gaacctacaa acggtaaatt ggcgacccgc agcattccct gcaaggaacc atcttcgccc
     7801 agcgtaccgt ggacaatcgg gaaaatgaca tccaccgtcg gtaacggctg accgttttgc
     7861 gcgtcgataa gctgatgctc atgtttactt ggcacctgcg caaggctagt cgccgaaggg
     7921 cgcaacgcaa tatgggcagg atcgtctgca tttagcagat aattgctggc atcgctgacg
     7981 tgccattgcc cttgtttatc aatgcccagc agcacaacgt cgaagcgact tttatcaatg
     8041 gcatcgacaa tgttttttgc cgattgcaga gacacttcat gttccgctga tttaccacca
     8101 aaaacgattc ctacccgcag tttttccatc ttaaaaacct atcccgtcta acacaaagtg
     8161 catacattac cacgacaaaa cgggggattc gcggccttct gacagaatgt tgcaatcttc
     8221 tgctgacaaa gcgtgcaacg taatggtgaa gaaagtgcgt tattacaaag atgtgcgcga
     8281 gatcacaaaa atgatgaacg ggaagctaat ttattcctgg cttaaatggc catgcggtga
     8341 gttttttctc ttagttgtaa gtaaacgcag agaatatatt tcataacttt tgtttataat
     8401 aaaggttgat aattaaaggc ctgttctttg tgtggttaat tatttaaata tgagaaacgt
     8461 ttcgctggta atcaaacaaa gaacatttgc gcaaagtatt tcctttgtca taaaaataat
     8521 acttccagac actatgaagt tgtgaaacat aatgttaact tctccatacg ttggataagg
     8581 aaatacagac atgaaaaatc tcattgctga gttgttatta aagcttgccc aaaaagaaga
     8641 agagtcgaaa gaactgtgcg cgcaggtaga agctttggag attatcgtca ctgcaatgct
     8701 tcgcaatatg gcacaaaatg accaacagcg cttgattgaa caggtggagg gggctcttta
     8761 cgaggtaaag cctgatgcca gcattcctga cgacgatacg gagctgctgc gcaattatgt
     8821 aaagaagtta ttgaagcatc ctcgtcagta aaaagttaat cttttcaaca gctgtcataa
     8881 agttgtcacg gccgagactt atagtcgctt tgtttttatt ttttaatgta tttgtacatg
     8941 gagaaaataa agtgaaacaa agcactattg cactggcact cttaccgtta ctgtttaccc
     9001 ctgtgacaaa agcccggaca ccagaaatgc ctgttctgga aaaccgggct gctcagggcg
     9061 atattactgc acccggcggt gctcgccgtt taacgggtga tcagactgcc gctctgcgtg
     9121 attctcttag cgataaacct gcaaaaaata ttattttgct gattggcgat gggatggggg
     9181 attcggaaat tacagccgca cgtaattatg ccgaaggtgc gggcggcttt tttaaaggta
     9241 tcgatgcctt accgcttacc gggcaataca ctcactatgc gctgaataaa aaaaccggca
     9301 aaccggacta cgtcaccgat tcggctgcat cagcaaccgc ctggtcaacc ggtgtcaaaa
     9361 cctataacgg cgcgctgggc gtcgatattc acgaaaaaga tcacccaacg attctggaaa
     9421 tggcaaaagc cgcaggtctg gcgaccggta acgtttctac cgcagagttg caggatgcca
     9481 cgcccgctgc gctggtggca catgtgactt cgcgcaaatg ctacggtccg agcgcgacca
     9541 gtgaaaaatg tccgggtaac gctctggaaa aaggcggaaa aggatcgatt accgaacagc
     9601 tgcttaatgc tcgtgccgac gttacgcttg gcggtggcgc aaaaaccttt gctgaaacgg
     9661 caaccgccgg tgaatggcag ggaaaaacgc tgcgtgaaca ggcacaggcg cgtggttatc
     9721 agttggtcag cgatgccgcc tcgctaaatg cggtgacgga agcgaatcag caaaaacctc
     9781 tgcttggact gtttgctgac ggcaatatgc cagtgcgctg gctaggaccg aaagcaacgt
     9841 accacggcaa tatcgataag cccgcagtca cctgtacgcc taatccgcaa cgtaatgaca
     9901 gtgtaccaac cctggcgcag atgaccgaca aagccattga attgttgagt aaaaatgaga
     9961 aaggattttt cctgcaagtt gaaggtgcgt caatcgataa acaggatcac gctgcgaatc
    10021 cttgtgggca aattggcgag acggtcgatc tcgatgaagc cgtacaacgg gcgctggaat
    10081 tcgctaaaaa ggatggcaac acgctggtca tagtcaccgc tgatcacgcc cacgccagcc
    10141 agattgtcgc gccggatacc aaagctccgg gcctcaccca ggcgctaaat accaaagatg
    10201 gcgcagtgat ggtgatgagc tacgggaact ccgaagagga ttcacaagaa cataccggca
    10261 gtcagttgcg tattgcggcg tatggcccgc atgccgccaa tgtcgttgga ctgaccgacc
    10321 agaccgatct cttctacacc atgaaagccg ccctggggct gaaataaaac cgcgcccggc
    10381 agtgaatttt cgctgccggg tggttttttt gctgttagca accagactta atggcaaatc
    10441 tcgggcgcat acgctcatgg ttaaaacatg aagagggatg gtgctatgaa aattacatta
    10501 ctggttacct tgtttttcgg tctggttttt ttaaccacag tcggcgctgc cgagagaacg
    10561 ttaaccccac aacaacagcg tatgacctcc tgtaatcagc aggcgacggc gcaggcgttg
    10621 aaaggggatg ctcgtaagac ctacatgagt gattgcctga agaacagcaa gtctgcgcct
    10681 ggtgaaaaaa gtttgacgcc acagcagcaa aagatgcgcg aatgtaataa tcaagcaacg
    10741 caacaatctc tgaaaggtga tgatcgtaat aagtttatga gtgcctgcct caagaaagcc
    10801 gcctgatacc tgatagtgct aacgggtgag ctacgaaagt ggctcacccg aaatttcata
    10861 cttctgcctt tagccccgtc tctataattt gggaaaattg tttctgaatg ttcccaaaaa
    10921 taatgaatga tgaaaacttt ttcaaaaaag cggcggcgca tggggaggaa cctcctttaa
    10981 ctcctcaaaa cgaacatcag cggtccgggc tgcgcttcgc ccgtcgcgtc agactacccc
    11041 gtgcggttgg cctggctggc atgttcttac cgattgcttc aacgctggtt tcgcacccgc
    11101 cgccgggctg gtggtggcta gtgttggtcg gctgggcgtt cgtctggccg catttagcct
    11161 ggcagatagc gagcagggcc gtcgatccgc ttagccggga aatttacaac ttaaaaaccg
    11221 atgcagtatt agcgggaatg tgggtaggcg taatgggcgt aaacgtgctg ccttccaccg
    11281 ctatgttgat gattatgtgt ctgaatttga tgggggcagg cggcccccgt ctgtttgtcg
    11341 cgggtctggt gttgatggtg gtttcctgcc ttgtcaccct cgagcttacg ggcattaccg
    11401 tgtcgttcaa tagtgcgccg ctggaatggt ggctctccct tcccattatt gtcgtttatc
    11461 ctctgctgtt tggctgggtc agctaccaga cggcaaccaa actggcggaa cataaacgca
    11521 ggttgcaggt catgagtacc cgcgacggca tgacgggcgt gtataaccga cgtcattggg
    11581 aaactatgtt acgcaatgaa tttgataact gtcggcggca taatcgcgat gcaacgttac
    11641 tgattatcga tatcgaccat ttcaagagca tcaacgatac ctggggtcat gatgtgggcg
    11701 atgaagcgat tgtggcgctt acccgacagt tacaaattac cctgcgcggt agcgatgtga
    11761 ttggtcggtt tggcggcgat gagtttgcag taatcatgtc cggtacgcca gctgagagcg
    11821 ccattaccgc catgttacgg gtgcgtgaag ggctaaacac gttacgcttg ccgaatacgc
    11881 cacaggtaac tttacggatt agtgtggggg ttgcgccgct gaacccacaa atgagtcact
    11941 atcgtgagtg gttgaaatcg gcagatttgg cgctttacaa agcaaagaaa gccggacgta
    12001 accgcaccga agtggcggcc tgacgtcagg cgaaagtcat caggatttgc tgagtttttc
    12061 tgatttttcc atacacttcg tcatcgcttc gatcactgcg gcacggaagc ctttctcttc
    12121 cagtacgcgt accgcttcaa tggtggtgcc tcccggtgag cagaccatat ctttcagtgc
    12181 ccccggatgt tctcccgttt ccagcaccat ttttgcggaa cccattaccg cctgagcggc
    12241 aaatttatac gcctgggcgc gtggcatccc gcccagcacg gcggcgtcgg ccatcgcttc
    12301 gataaacata aatacgtagg ctggcgaaga accgctcaca ccgactaccg ggtggatcat
    12361 cggctcagca attacttccg cttcgccaaa gcagcggaaa atattcagca catcagcggt
    12421 atcttctggg gttaccagcg cgtttggcgt tacggaggtc atcccggcat taaccagcgc
    12481 gggagtgttc ggcatggcgc ggataatttt ccggtcatgg cccagcgcgc gggcaagctg
    12541 gtcgagcgtg acacctgcag caatagaaac gaccagagag tctttattca ggctggaggt
    12601 gatttcgcta agcactttaa tcatgatgcc aggtttaacg gcagcaaaaa tgatgtcggc
    12661 gatttgcgcc acttcttgcg ccgattctgc ggcgttgatg ccgaactggt catgcagggc
    12721 ggcgacttta ttcggggagg gggtgtatac ccagatttgc cctggaagca cctgaccgct
    12781 ggcaatcaga ccgccgagaa tggcttttcc catattgccg cagccaataa aaccgatttt
    12841 cttttccatt gcctcactcc tgccgtgaaa ttcattgttt tgataatcgc tggcagaagc
    12901 ataaacagaa ctatgccgga aggcaaaagc gcgacacaat agaggattac ccaacaaagg
    12961 atgactttat gacaatttgg gtggatgctg acgcgtgtcc caatgtaatt aaagagattt
    13021 tgtatcgcgc ggcggaacgt atgcagatgc cgctggtact ggtagcaaac cagagtttac
    13081 gcgtgccgcc atcgcgattt attcgtacgc tgcgcgtcgc ggcaggtttc gacgttgccg
    13141 ataacgaaat tgtccggcag tgtgaagcgg gcgatttggt gatcaccgca gatatacctt
    13201 tggctgctga agccatcgag aaaggcgcag cggcgcttaa tccgcgcggc gaacgttaca
    13261 cgccagcgac cattcgtgag cgcctgacga tgcgcgattt tatggatacc ttacgtgcca
    13321 gtgggatcca gaccggcgga ccagatagcc tttcacaacg tgaccgccag gcctttgccg
    13381 cggagctgga gaagtggtgg ctggaagtgc aacgtagtcg tggctaaatg taatttatta
    13441 tttacacttc attcttgaat atttattggt atagtaaggg atgtattgag attttcactt
    13501 taagtggaat tttttcttta caatcgaaat tgtactagtt tgatggaatg atcgctattc
    13561 tcatgacacc ggctttcgcc gcattgcgac ctattgggga aaacccacga tgacacaacc
    13621 tctttttctg atcgggcctc ggggctgtgg taaaacaacg gtcggaatgg cccttgccga
    13681 ttcgcttaac cgtcggtttg tcgataccga tcagtggttg caatcacagc tcaatatgac
    13741 ggtcgcggag atcgtcgaaa gggaagagtg ggcgggattt cgcgccagag aaacggcggc
    13801 gctggaagcg gtaactgcgc catccacagt tatcgctaca ggcggcggca ttattctgac
    13861 ggaatttaat cgtcacttca tgcaaaataa cgggatcgtg gtttatttgt gtgcgccagt
    13921 atcagtcctg gttaaccgac tgcaagctgc accggaagaa gatttacggc caaccttaac
    13981 gggaaaaccg ctgagcgaag aagttcagga agtgctggaa gaacgcgatg cgctatatcg
    14041 cgaagttgcg catattatca tcgacgcaac aaacgaaccc agccaggtga tttctgaaat
    14101 tcgtagcgcc ctggcacaga cgatcaattg ttgattttag agcgcctata cttaacgttc
    14161 attccgtgaa ataaggaaga acgatgccaa cgaaaccgcc ttatcctcgt gaagcatata
    14221 tagtgacgat tgaaaaagga aagccaggac agacggtaac ctggtaccaa ctcagagccg
    14281 atcatcctaa accagactcg ttgatcagtg aacatccgac cgctcaggaa gcgatggatg
    14341 cgaaaaaacg ctatgaggac cctgacaaag agtgaccgca tcagactgct cggaagggat
    14401 tctgagtgcc actacaaggg atctgcgtca catttttcat aattcatgtt tttctaataa
    14461 ttagaatatt aaacaataac aatccattac tggaatcatt tggaatcttt acattatgcc
    14521 gtgcacgtct gctgctacgc tttttgtcat ttgtagcaca agtaagtgtc agcagtggtg
    14581 cttcacactt gcccggtaat taacgacgaa agaaaagtaa ggtggatgaa caatgagtgc
    14641 gtcgttggcg atcctgacca tcggcattgt acctatgcag gaggttttgc cgctcctgac
    14701 ggaatacatt gacgaagata atatttccca tcatagcctg ctggggaagt taagtcgtga
    14761 agaagtgatg gcggagtacg cgccagaagc aggcgaagac accattctca cattattaaa
    14821 tgacaaccag ctggcccatg tttcgcgtcg taaagtggag cgagacctgc aaggtgtggt
    14881 tgaagtgctc gataatcagg gttatgacgt cattttatta atgagtacag caaacattag
    14941 tagtatgact gcgcgtaata cgatctttct tgagccgtcg cgaatattgc ctccactggt
    15001 ttcctctatt gttgaagatc atcaggtggg ggttatcgtt ccggttgagg agatgctgcc
    15061 cgttcaggcg caaaaatggc aaattttgca gaaatcgccg gtattttcat tgggtaaccc
    15121 cattcatgat tcagaacaaa aaatcattga tgcagggaaa gaattactgg caaaaggggc
    15181 tgatgtcatc atgctggatt gtttaggatt tcaccaacgt catcgcgatt tactgcaaaa
    15241 acagctcgat gttcctgtct tgctgtctaa cgtattgatt gcacggctgg ctgcggaatt
    15301 actggtgtaa ttttgcgtga cagccagcgc ctctggcccc tatagtgaag tagatgttca
    15361 actaccagac agggccagtt tatgcttcaa agtaatgagt acttttccgg caaagtgaaa
    15421 tcaatcggct tttccagcag cagcactggt cgcgccagcg tgggtgttat ggttgaaggc
    15481 gaatacacct tcagcaccgc tgagccggaa gagatgacgg taatcagtgg cgcgctgaat
    15541 gtgttactgc ctgatgcgac cgactggcag gtgtatgaag ccggttcggt gtttaatgtt
    15601 cccggtcaca gtgagtttca tctgcaagtt gccgaaccca cctcttatct gtgccgctat
    15661 ctgtaattcc tcgccttccc cttgaacggg agggcatttt tctgaaatat cctctcttta
    15721 acccataata atatttcctt tgctgcgatt ttttcaattt ccgatatatt cataattcat
    15781 caaggttgat ataaatatca gtgaagatct ccagatattg ttgcggaact ggctacgata
    15841 aaagataaat cagatgatga atggtggcgt gcattgctgc aaagtcgcaa tgatcatttg
    15901 cgccaaacgg cattacgcaa cgcacatacc ccggcgtcgt tgttaacgac attgaccgag
    15961 tctcggcatc ggtcgctagc tatgaataat ccacagctcg ctgccgatgt gaaaacgacg
    16021 tggttaaaag aggatccatc attactctta tttgtcgaac aacccgatct ttcgctgtta
    16081 cgggatttag tgaaaaccgg ggcaatgcgg aaaattcgca gtgaagcgcg tcactggctt
    16141 gaggaaaaac aatgacacaa cgtccatgga gcaagttaca gcataaaacg cataatattg
    16201 ctgcgctaaa aattattgtc cgccgtagcg aataattata tccctggtgt ggcttcgtac
    16261 gccggataag acgcggcagg cgtcgcatcc ggcattaaag gaaaatcagc aattaacgtt
    16321 gtgcttcgcc acctaatcct tcaatcaggt tttgaattaa cgctgccagt tcaccagtca
    16381 tcaggatgaa atcggcatca aaacgctggg cgaaatcttc acggtcgata tcttcgtttt
    16441 gatcgcgcag ctcgtcgcaa aacttcagac gcttgagcga accatcgtcg cacatcacaa
    16501 actgaatgcg ctgctgccag tcgagcgcca gtttagtcac cacttttccg gcttcgatgt
    16561 gattggtgat ctcttcgctg gtcagatctt gtttcttcgc gcggatcacg ccgccatctt
    16621 ccagcaacga tttcagctcg gcttcatcaa gcagctggaa gccctgtgcc gcgctaccgg
    16681 agcgaaccca ttcggtcagc gtcagttcaa tcgggttttc catgctcaat ggtaccacag
    16741 gtaacgaccc caggctttta cgcagcagtg ccagcgtatc ttccgctttt ttggcactgg
    16801 cgcagtccac cataatcaaa ccgttaaccg tgtcgatcca catcattgtc tggctaaaac
    16861 ggctgaaagc acgcggcaac agagagtgca gcacttcgtc tttcagcgaa tctttttcgg
    16921 ttttcttcag cttacgcgcc tgttccgctt ccagtttggc gattttcgct tccagcgcct
    16981 gcttaatcac cggagacggg aggatttttt cttctttgcg cgcgcagata acaatttgac
    17041 cattggcaac gtgcgttaac gcatcgctgt gcgatcccat cggaggaacc cagcccatct
    17101 tcgccatgtc ctggctgccg catggggtaa atgccatcga ggctagctgt ttttccatct
    17161 cttctgcacg cagcgaaatc tcgcggctaa gacggtaaac cattaaattt ttgaaccaca
    17221 gcatgataat ttccacggcc ttgttgttaa atttagcggg catgataacg aattgtcggc
    17281 ggccttgcat tgccaatccg gttgtccgtc tctacgctat tgatattgaa aaaaataagg
    17341 agagtaccgt gcgtataggt atcgatttag gcggcaccaa aactgaagtg attgcactgg
    17401 gcgatgcagg ggagcagttg taccgccatc gtctgcccac gccgcgtgat gattaccggc
    17461 agactattga aacgatcgcc acgttggttg atatggcgga gcaggcgacg gggcagcgcg
    17521 gaacggtagg tatgggcatt cctggctcaa tttcgcctta caccggtgtg gtgaagaatg
    17581 ccaattcaac ctggctcaac ggtcagccat tcgataaaga cttaagcgcg aggttgcagc
    17641 gggaagtgcg gctggcaaat gacgctaact gtctggcggt ttcagaagca gtagatggcg
    17701 cggcagcggg agcgcagacg gtatttgccg tgattatcgg cacgggatgc ggcgcgggcg
    17761 tggcattcaa tgggcgggcg catatcagcg gcaatggcac ggcaggtgag tggggacaca
    17821 atccgctacc gtggatggac gaagacgaac tgcgttatcg cgaggaagtc ccttgttatt
    17881 gcggtaaaca aggttgtatt gaaaccttta tttcgggcac gggattcgcg atggattatc
    17941 gtcgtttgag cggacatgcg ctgaaaggca gtgaaattat ccgcctggtt gaagaaagcg
    18001 atccggtagc ggaactggca ttgcgtcgct acgagctgcg gctggcaaaa tcgctggcac
    18061 atgtcgtgaa tattctcgat ccggatgtga ttgtcctggg gggggggatg agcaatgtag
    18121 accgtttata tcaaacggtt ccgcagttga ttaaacaatt tgtcttcggc ggcgaatgtg
    18181 aaacgccggt gcgtaaggcg aagcacggtg attccagcgg cgtacgcggc gctgcgtggt
    18241 tatggccaca agagtaaaaa acgtaggcaa ttggcgcatc atgcctgatg cgacgcttgc
    18301 cgcgtcttat caggcctgca aaatgtgcca gaaccgcgta gggcggataa ggcgttcacg
    18361 ccgcatccgg caataagtaa tgaacaccga gactataacc taccccagtg gtttcgccag
    18421 caccggagta tccgccgctt gctggcgctt atagcgacca tacagcagca acgacgacat
    18481 cgcagcaaac gaaagcaggg cggcaggcag cgccacgtaa ttatatgcca gccccagcgt
    18541 cagcatcata ccaccgcaat atgcgccgac ggcgctaccg aggttaaacg ctatttgccc
    18601 acctgcggca cctaataact ctccgccttt ggcgttttgt agtaacaata tttgtagcgg
    18661 tgctgaaagg gcaaataatc ccgcgcaaca aataaaagca aaaataagcg acgttgtttt
    18721 catgccgccg cagaaaaaga acatcagcag tgccagtaca attataaagt cagtcactgc
    18781 tgcaatgcgc agtggtgaat aacgtcctga aatcctgcca cttagcatat ttcccagcac
    18841 catccctagc ccaactaaca tcataataaa ggtcatcgcc gtttccgaaa aaccggaaat
    18901 aaacatcatg tatggcttta cgtagctgaa ccaggcaaac acacctgcgt tgccaaacat
    18961 ggtggcggcg aaaattaacc acggggccgg gctgcgcaaa aagtgaaatt gttcgcgcag
    19021 ctttcctttc gcctcgtcgc gaatatccgg cacccaaaaa tagaccgatg ccatcaccgc
    19081 aatattaaaa acagcgatca ataaaaaggt gtaacgccag ctaaattcct gacttaaata
    19141 cgttcccagc ggaatgccca gcaaattggc gactgtcatc ccggaaacca tccccgccac
    19201 ggcggcggtg acttttccgg gtttgataat ttttgataac acgatcgcgc cgacgccaaa
    19261 aaatgcgcca tgcggaaagc cggataccag ccgaccaatg gcgagcatca ggtaagacga
    19321 agagagcgtg aacatggcgt tgccaatgac gcacaacgcc accagaaaca acaagatatg
    19381 tttgagtgag tagcggctgg aaaagagtgc gatgattggc gcaccgacca ccactcccag
    19441 tgcataatac gagatcatat gcccggcagc aggaatcgaa attcctacgt tatgcgccag
    19501 ctccgtgagc acgcccataa tgccaaattc ggccatcccc aaaccaaacg tgcccagagc
    19561 caaagataaa atgacttttt tcataccacc atcacaacca ccagaacggc taccaatcac
    19621 cgtagccaat aaagtgatag cttgcaggat aacgaccagc aaggccaaga gataattcgc
    19681 ccctctgtat tcattatcct gctgaatagt tatttcactg caaacgtact ttccagtttg
    19741 ctgtagccca ggccgttgat ctttttcact ttgatctgca ccggaatacg ctctttcatc
    19801 gcttctacgt ggctaatcac accgatggtt ttgccactgg cgttcagggc atccagcgca
    19861 tcaagggcgg tatccagcgt ttcgctatcc agcgtgccaa aaccttcatc aaggaacagc
    19921 gagtcaatac gtgttttatg gctgaccaga tccgaaagcg ccagcgccag actaacgagg
    19981 aaactttcgc cgccggaaag ggtacgggta tcgcgtaccg catctgcctg ccaggtatca
    20041 acaacctcga cttccagcgc ctcgctggct ttgcgctgta acagatagcg cccgtgcagc
    20101 cgggtaagtt gctgattagc gagatggact aaattatcca gcgtcagccc ctgggcaaac
    20161 ttgcggaatt tatcgccctc tttggaacct attagcgaat tcagatatcc ccagtcctca
    20221 acctgctgcg tcatttgagc aatttgctgc attaaggttt gttgttgctg acggttatct
    20281 gcatcctgct tcagctgctg gcgaatctcg ccttgactcg tggtgttttc acgcaacttt
    20341 tggtgagttt gcgctaactc ttgctgaatc tgctccaccg tcacagtgag agccaacccg
    20401 tcaggtcggt gttgttgatg ctgtgccagc gtttctgctg tctgagtgac cagcgtttgc
    20461 gcctgacggc gctggttttc cagattctgc ttgagctgtt ccagctgcgt tagtgtttgt
    20521 tcatccatta gcgccgcaag gaacgcctgc tgatcgtcaa agacgctggc ctgtagcgcg
    20581 gtgtcaaact gcgcctgggc tttttgcaga ctttgcgccg ccagaacatc ctgttgctgt
    20641 aacgtctgct gctggctgtg taatgcgaga cattgttcat gaacctgccg ccagttatcc
    20701 agcgccacag tttcttcgct gtgcgggaga tcatcacttt gcggcaacgt ttccagaatc
    20761 ggcgtcagct gctgaatacg gttttgcagc gtggttaatt cgttctggcg ttgctgccag
    20821 ctctgcgctt cttgctgacg tgtcgccaac cagctctctt cttcatcttc ctgtggcaat
    20881 gtcagtgcat aacccgccaa tgccgttaag agctgctgct ggcgttgttc aatttgctgt
    20941 tgatactgga taatttgctg attatgcgcg gcaatctgcc cttgtaattc atgtcgttgg
    21001 ctgagtaacc gcagctggcg tttgtgctca tcttgtgcat ccagccacgg ttgaatatcg
    21061 tcctgtggct gcaaggtgat attgaggctg gccgtgacgg cttgccattg ttgagtaagt
    21121 gcttgctcat cttgtcggag gctttgcgct tcgttttcat cgcgctgaag ctgcttcgtt
    21181 aatgcatcca gttgcccgcg cagcgccgca ccttcttcgc cgagcttttt aacttcgttt
    21241 tccagcgcca gtaatcgaga ctgattaaca ccaggctcca gcgcctgata cgccttgacc
    21301 gccgggtggc tggtggaacc acaaagtgga caaggctgac ccgcctgtaa ctgtgcacgc
    21361 tgggcttcca gcgttttgat gcgcgcttcc tgctcgcaaa tggttttcac atcggcaagt
    21421 tgctgcgtct tttctttata acgctggcgc atttcgttaa gtgcgacatt acgttgcgtc
    21481 tgttccagag atccattctg gatagtgacc attaactgcg ccagacgttt ttgttgggga
    21541 acaatctgcc catgcagcgc gaccaggcgc tgacgcagtg ggcgttgctc agcatgttgc
    21601 gccagggcgg tagcaacttc atcggcggtt aacgtcaacg tgatcgccgc aagcgcatta
    21661 agtttttgct cagcatgggt taactgttgc tgccattgcc gcagatgctc gcgatcgctg
    21721 gtttgttggg agaactgcgc acgccaaccc gccagttcgt tgttccactg acggaagcgg
    21781 tcgtgttcct gtaaccaggt attcaggctt tgttgctgct gctgtaattc tgctgactgc
    21841 ttcgccgcgt ggtggcgaat gctcgcgcga agcgccattg tgctctgtaa gcgagtattt
    21901 acttcttcaa tctgctggcg agtatgcgcc agcgccgcgc tgtgttctgc gatgcgttcc
    21961 cagtgcggac gaagatttcg tgccggttgt gccagactga gcgccgccag ttgaggttgc
    22021 gctttttctt cttcggctaa cgcctgttgc aaggcctgct gacggcggct ggcttcttgc
    22081 tgcaattcgt ccagacgcgt taaccagttt agtgattgtt gttcttgctg ctgcgcggta
    22141 agtaactgtt tttcttcgtc agtaagtacc tgcaaactcg ctgtcagcga ttgcacttgt
    22201 tccggcgtga gcaacgcgac gccgctggcc tgcgcttgca gcttctccag ctctgtgcgg
    22261 gccgatttgt gctgctcaaa aaccatcgcc gagatttgcc cgtagatttc agtgccggtt
    22321 aactcctcga gcaattccgc gcgttctttg ggtttggcat tcaggaaggc agcaaattgc
    22381 ccctgcgaaa gcagcatcga acgggtgaag cgcccgtaat ccagcccggt taacgtcgct
    22441 gtcagttcca gcttatcttt cactttgtcg gcgagaattt tgccgtcggc gcagcgcgcc
    22501 agctctacgc gtggcacctg caaattaccg tcgggttggt tacgcgcccg attctggctc
    22561 cagaatgcac ggtacgcttc acctttcact tcaaactcca cctccgccag acattcggcg
    22621 gtatcgcggg tcatgagatc attttgcgat tgtgaaacgt tagagagacg cggagtttcg
    22681 tgatacagcg ccagacaaat ggcgtccagc agggtggttt tccccgcacc ggttgggccg
    22741 gtaatggcaa acagcccgtt gctggcgaac ggctcgcggg tgaaatcaat cttccattcg
    22801 ccttttaatg agttcaggtt tttcaggcgc aggctgagaa ttttcatgct tcgtgttctc
    22861 cggcgagggt atgcaacgtc gtggtgaaaa gatgctgcag acgttgctgc tgcgattcat
    22921 ccagttcttc cagtgccaga cggcgattga acacctcttc gacgctgagt tcgctgaggg
    22981 tttcacgctg ttggctggct aacacacgct cgcgctgttc acgactccga cgtaccagca
    23041 atacttcgac aggcaatgat tcggctaatg cctggatttt gcgctgaata tcatgcagat
    23101 actcatcagt agtgatttcg atatccagcc agacaggtgg ctcctgcgat acatcgcgcc
    23161 actgttccag ctgtgcggta atcgacgcca gatcgccttt cagcaccgcc atgggttgag
    23221 ttaccggtac gttcaggttt tccacgctct ctaatttgcc gtttgaaaat gtcaccagat
    23281 ggacatattt actcttaccg cattcatcaa aactcagtgg aatgggggaa ccgcaatagc
    23341 gaacatgttc catgccgcca ataatctgtg cgcggtgaat atgcccgagc gcgatgtagt
    23401 cggctggtgg aaagttttgt gccggaaacg cgtccagcgt gccaatataa atgtcacgca
    23461 cggcgtcact tttactggca cccacggtcg ttaaatgtcc cgtggcgatg atgggcagag
    23521 gctgatcgcc gcgcagtttg caggcatcgg catagtgttg ttggtaataa tcggtaatcg
    23581 ctgccagtaa atgctgctgt ttttcaatac cgttaagccc cgcctggctg gaaataatgt
    23641 cacgcgggcg taaaaacgga atggggcaca gcactgcgcc tggcgtcccg tcgcgacgag
    23701 gcaagatttg cggcgcatgt ccggcgctgg cgaccacggt tgtattgagg aacgccatga
    23761 tatcgcgcga ttcattcagc gtggcgaccg agtcatggtt tcctgccagt accaccagat
    23821 gacagccagt ttgctgtaaa ttgacaacaa aacggttgta taacgtgcgg gcgtaactgg
    23881 gcggcgagcc ggtatcgaaa acatcaccag caacaataat cgcatccacc tgatgggttt
    23941 gtgctgtctc cagcagccag tcaagaaaag cctgatgttc agcttcgcgg cttttactgt
    24001 agaagttctg gccgagatgc cagtctgagg tgtgaaggat gcgcataacg gttccctggc
    24061 gaaaaagcat ggtcgcgatt atacccaaac agatgtgcca tttgcttttt tctgcgccac
    24121 ggaaatcaat aacctgaaga tatgtgcgac gagcttttca taaatctgtc ataaatctga
    24181 cgcataatga cgtcgcatta atgatcgcaa cctatttatt acaacagggc aaatcatggc
    24241 gagacgtatt ctggtcgtag aagatgaagc tccaattcgc gaaatggtct gcttcgtgct
    24301 cgaacaaaat ggctttcagc cggtcgaagc ggaagattat gacagtgctg tgaatcaact
    24361 gaatgaaccc tggccggatt taattctcct tgactggatg ttacctggcg gctccggtat
    24421 ccagttcatc aaacacctca agcgcgagtc gatgacccgg gatattccag tggtgatgtt
    24481 gaccgccaga ggggaagaag aagatcgcgt gcgcggcctt gaaaccggcg cggatgacta
    24541 tatcaccaag ccgttttcgc cgaaggagct ggtggcgcga atcaaagcgg taatgcgccg
    24601 tatttcgcca atggcggtgg aagaggtgat tgagatgcag ggattaagtc tcgacccgac
    24661 atctcaccga gtgatggcgg gcgaagagcc gctggagatg gggccgacag aatttaaact
    24721 gctgcacttt tttatgacgc atcctgagcg cgtgtacagc cgcgagcagc tgttaaacca
    24781 cgtctgggga actaacgtgt atgtggaaga ccgcacggtc gatgtccaca ttcgtcgcct
    24841 gcgtaaagca ctggagcccg gcgggcatga ccgcatggtg cagaccgtgc gcggtacagg
    24901 atatcgtttt tcaacccgct tttaacgcct tgctcatcgg acgcagagca gggcttatga
    24961 tttcttaact ggagtatctt acgtgctgga acggctgtcg tggaaaaggc tggtgctgga
    25021 gctgctactt tgttgcctcc cggctttcat cctgggtgca ttttttggtt acctgccctg
    25081 gtttttgctg gcatcggtaa caggactgct tatctggcat ttctggaatt tattgcgcct
    25141 ttcatggtgg ttgtgggtgg atcgcagtat gaccccgcca ccggggcgtg gtagctggga
    25201 accgctacta tacggcttac accagatgca gctgcgaaat aaaaaacgcc gccgtgaact
    25261 gggcaatctg attaaacgct ttcgtagcgg cgcggagtcg ctgcctgacg cggtggtgct
    25321 gaccacggaa gagggcggta ttttctggtg taacggtctg gcgcaacaaa ttcttggttt
    25381 gcgctggccg gaagataacg ggcagaacat ccttaaccta ctgcgttacc cggagtttac
    25441 gcaatatctg aaaacgcgtg atttttctcg cccgctcaat ctggtgctca acaccgggcg
    25501 gcatctggaa attcgcgtca tgccttatac ccacaaacag ttgctgatgg tggcgcgtga
    25561 tgtcacgcaa atgcatcaac tggaaggggc gcggcgtaac ttttttgcca acgtgagcca
    25621 tgagttacgt acgccattga ccgtgttaca gggttacctg gagatgatgg atgagcagcc
    25681 gctggaaggc gcggtacgcg aaaaagcgtt gcacaccatg cgcgagcaga cccagcggat
    25741 ggaagggctg gtgaagcagt tgctaacgct gtcgaaaatt gaagccgcgc cgacgcaatt
    25801 gctcaatgaa aaggttgatg tgccgatgat gctgcgcgtt gttgagcgcg aggctcagac
    25861 tctgagtcag aaaaaacaga catttacctt tgagatagat aacggcctca aagtgtctgg
    25921 caacgaagat cagctacgca gtgcgatttc gaacctggtc tataacgccg tgaatcatac
    25981 tccagaaggc acgcatatca ccgtacgctg gcagcgagtg ccgcacggtg ccgaatttag
    26041 cgttgaagat aacggaccgg gcattgcacc ggagcatatt ccgcgcctga ccgagcgttt
    26101 ttatcgcgtt gataaagcgc gttcccggca aaccggcggt agcggattag ggttagcgat
    26161 cgtgaaacat gctgtgaatc atcacgaaag tcgcctgaat attgagagta cagtaggaaa
    26221 aggaacacgt ttcagttttg ttatcccgga acgtttaatt gccaaaaaca gcgattaatc
    26281 cgcctttgtc atcttttatt gccataagcc agtcgatgct ggcttatttt ctttgcagtc
    26341 aaaatacggg cgttagattt tacaacggtt ggtgattttt tgttcgcatg attagccatg
    26401 tctttttcac ggaaatagtg ttttatactg gttggtgatt tcttatcgct atatacctct
    26461 ggtttttaga tccctccttg ctttaaaacg ttataagcgt ttaaattgcg cttcaggtgc
    26521 tgtcatactg actgcattaa cgcggtaaat cgaaaaacta ttcttcgccg cgccaggttg
    26581 ggagtatttc ccgctaaaat tgtttaaata taccgctgta tcatccccag ggattggcac
    26641 aaaaatttaa cgttacaaca ccacatccac aggcagtatg atttatgacc catcaattaa
    26701 gatcgcgcga tatcatcgct ctgggcttta tgacatttgc gttgttcgtc ggcgcaggta
    26761 acattatttt ccctccaatg gtcggcttgc aggcaggcga acacgtctgg actgcggcat
    26821 tcggcttcct cattactgcc gttggcctgc cggtattaac ggtagtggcg ctggcaaaag
    26881 ttggcggcgg tgttgacagc ctcagcacgc caatcggtaa agtcgctggc gtgctgctgg
    26941 caacggtttg ttacttggcg gtggggccgc ttttcgctac gccgcgtaca gctaccgttt
    27001 cctttgaagt ggggattgcg ccgctgacgg gtgattccgc gctgccgctg tttatctaca
    27061 gcctggtcta tttcgctatc gttattctgg tttcgctcta tccgggcaag ctgctggata
    27121 ccgtgggcaa cttccttgcg ccgctgaaaa ttatcgcgct ggtcatcctg tctgttgccg
    27181 ctattgtctg gccggcgggt tctatcagca cggcgactga ggcttatcaa aacgctgcgt
    27241 tttctaacgg cttcgttaac ggctatctga ccatggatac gctgggcgca atggtgtttg
    27301 gtatcgttat tgttaacgcg gcgcgttctc gtggcgttac cgaagcgcgt ctgctgaccc
    27361 gttataccgt ctgggctggc ctgatggcgg gtgttggtct gactctgctg tacctggcgc
    27421 tgttccgtct gggttcagac agcgcgtcgc tggtcgatca gtctgcaaac ggcgctgcta
    27481 ttctgcatgc ttacgttcag cacacatttg gcggcggcgg tagcttcctg ctggcggcgt
    27541 taatcttcat cgcctgcctg gtaacggcag ttggcctgac ctgtgcttgt gcagaattct
    27601 ttgcccagta cgtaccgctc tcttatcgta cgctggtgtt tatcctcggc ggcttctcga
    27661 tggtggtgtc taacctcggc ttaagccagc tgatccagat ctccgtaccg gtgctgaccg
    27721 ctatttatcc gccgtgtatc gcactggttg tattaagttt tacacgctca tggtggcata
    27781 attcgtcccg cgtgattgcc ccgccgatgt ttatcagcct gctttttggt attctcgacg
    27841 ggatcaaagc atctgcattc agcgatatct taccgtcctg ggcgcagcgt ttaccgctgg
    27901 ccgaacaagg cctggcgtgg ttaatgccaa cagtggtgat ggtggttctg gccattatct
    27961 gggatcgcgc ggcaggtcgt caggtgacct ccagcgctca ctaaatcact gaacatttgt
    28021 tttaaccacg gggctgcgat gccccgtggt tttttattgt gttgatgggt taggaattga
    28081 tggaaagtaa gaacaagcta aagcgtgggc taagtacccg ccacatacgc tttatggcac
    28141 tgggttcagc aattggcacc gggctgtttt acggttcggc agacgccatc aaaatggccg
    28201 gtccgagcgt gttgttggcc tatattatcg gtggtatcgc ggcgtatatc attatgcgtg
    28261 cgctggggga aatgtcggta cataacccgg ccgccagctc tttctcgcgt tatgcgcagg
    28321 aaaacctcgg cccgctggca ggttacatta ccggctggac ctactgcttt gaaatcctaa
    28381 ttgtcgccat cgccgatgtg accgcttttg gtatctatat gggtgtctgg ttcccgacgg
    28441 tgccgcactg gatttgggta ctgagcgtgg tgctgatcat ttgcgccgta aacctgatga
    28501 gcgtgaaggt attcggtgag ctggaattct ggttctcgtt ctttaaagtc gccaccatca
    28561 tcatcatgat tgtcgccggt ttcggcatca tcatctgggg gattggcaac ggcgggcaac
    28621 cgaccggtat tcataacctg tggagcaacg gcggcttctt cagtaacggc tggcttggca
    28681 tggtaatgtc gttgcaaatg gtgatgtttg cttacggtgg gatcgaaatt atcgggatta
    28741 ccgccggtga agcgaaagat cctgagaaat cgattccgcg tgcgattaac tccgtgccga
    28801 tgcgtattct ggtgttctac gtcggtacgc tgttcgtcat tatgtctatc tacccgtgga
    28861 atcaggttgg cactgccggt agcccgttcg tgctgacgtt ccagcatatg ggcattacct
    28921 ttgccgccag cattcttaac tttgttgtgc tgaccgcttc gctgtcggca attaacagtg
    28981 acgtatttgg cgtaggccgt atgctccacg gtatggcaga gcagggcagc gcaccgaaaa
    29041 ttttcagcaa aacgtcgcgt cgcggtattc cgtgggttac ggtgctggtg atgactaccg
    29101 cgctgctgtt tgcggtgtat ctgaactaca tcatgccgga aaacgtcttc ctggtgatcg
    29161 cttcgctggc aaccttcgcc acggtatggg tgtggattat gatcctgctg tcgcaaatcg
    29221 ccttccgtcg ccgtttgccg ccagaagaag ttaaggcgct gaaatttaaa gtgccgggtg
    29281 gggtagcaac gaccatcggc gggctgattt tcctgctctt tattatcggg ttgattggtt
    29341 atcacccgga tacgcgtatc tcgctgtatg tcggtttcgc gtggattgtt gtgctgttga
    29401 ttggctggat gtttaagcgt cgccacgatc gtcagctggc tgaaaaccag taatccttgc
    29461 gttctgtaag ccggttcagg aggaaatcct gatccggcta ttccgaaagt tatccgcccc
    29521 cgtcctcctc ccccaaatat ccttcagatg atgagtgatc ctgcattagg ctatggcaag
    29581 gtgatcagat tttcatcaca ggggaattat gatgttaaat gcatggcacc tgccggtgcc
    29641 cccatttgtt aaacaaagca aagatcaact gctcattaca ctgtggctga cgggcgaaga
    29701 cccaccgcag cgcattatgc tgcgtacaga acacgataac gaagaaatgt cagtaccaat
    29761 gcataagcag cgcagtcagc cgcagccagg cgtcaccgca gggcttcagc cgaatgccgc
    29821 cggcacgact ggagcagttt gccgtcgatg taccggatat cggcccacaa tgggctgcgg
    29881 atcagatttt ttatcagatc ttccctgatc gttttgcgcg tagtcttcct cgtgaagctg
    29941 aacaggatca tgtctattac catcatgcag ccggacaaga gatcatcttg cgtgactggg
    30001 atgaaccggt cacggcgcag gcgggcggat caacgttcta tggcggcgat ctggacggga
    30061 taagcgaaaa actgccgtat ctgaaaaagc ttggcgtgac agcgctgtat ctcaatccgg
    30121 tgtttaaagc tcccagcgta catcaatacg ataccgagga ttatcgccat gtcgatccgc
    30181 agtttggcgg tgatggggcg ttgctgcgtt tgcgacacaa tacgcagcag ctgggaatgc
    30241 ggctggtgct ggacggcgtg tttaaccaca gtggcgattc ccatgcctgg tttgacaggc
    30301 acaatcgtgg cacgggggga gcttgttaca accctgaatc gccctggcgc gactggtact
    30361 cgtttagtga tgatggcacg gcgctcgact ggcttggcta tgccagcttg ccgaagctgg
    30421 attatcagtc ggaaagtctg gtgaatgaaa tttatcgcgg ggaagacagt attgtccgcc
    30481 attggctgac agcgccgtgg agtatggacg gctggcggct ggatgtggtg catatgctgg
    30541 gggaggcggg tggggcgcgc aataatatgc agcacgttgc tgggatcacc gaagcggcga
    30601 aagaaaccca gccggaagcg tatattgtcg gcgaacattt tggcgatgca cggcaatggt
    30661 tacaggccga tgtggaagat gccgccatga actatcgtgg cttcacattc ccgttgtggg
    30721 gatttcttgc caataccgat atctcttacg atccgcagca aattgatgcc caaacctgta
    30781 tggcctggat ggataattac cgcgcagggc tttctcatca acaacaatta cgtatgttta
    30841 atcagctcga cagccacgat actgcgcgat ttaaaacgct gctcggtcgg gatattgcgc
    30901 gcctgccgct ggcggtggtc tggctgttca cctggcctgg tgtaccgtgc atttattacg
    30961 gtgatgaagt gggactggat ggtaaaaacg atccgttttg ccgtaaaccg ttcccctggc
    31021 aggtggaaaa gcaggatacg gcgttattcg cgctgtaccg gcgaatgatt gtgctgcgta
    31081 agaaaagtca ggcgctgcgt cgtggcggct gtcaggtgct gtatgcggaa gataacgtag
    31141 tggtatttgt ccgcgtgctg aatcagcaac gtgtactggt ggcaatcaac cgtggcgagg
    31201 cctgtgaagt ggtgctaccc gcgtcaccgt ttctcaatgc cgtgcaatgg caatgcaaag
    31261 aagggcatgg gcaactgact gacgggattc tggctttgcc tgccatttcg gctacggtat
    31321 ggatgaacta acgttttata acgccttgtg tgacgcctgc gccatcatcc gcggataaaa
    31381 ctgccagaag cgggttccga gggcggtata atgggcgttt aaatcgtacc aggagtcacg
    31441 cagggcatcc agacgtgggc gacggcttgc catgccgttt aacacgttct ggatgaaatc
    31501 catatcgcga tagcgcacca gccactgctc tgaccacaag taattgttta gattgataaa
    31561 acgtggcggt gagtccggca aaatcgtcat cacttgcttg cgggcataac agataaattc
    31621 ctgtagcgga aagtccggcg acagctgcga ccagtggcgg gaaagaaagt gatcccacat
    31681 gacatccagc gtaataggcg caacgcggcg cgtttcacga cgaaaccact cccgtgcttc
    31741 gcggacttcc ggcagattgt cagtcaatac gtcgatacgt cgatgcatat gaatgccagc
    31801 cacgacgtcg ggcggaaaac tttcttcagg atttccgcgt acgaaatcag ccagtaaatt
    31861 gccggaaagc gagctttccg cgagatgggc taaatgcagg tgagctaaaa aattcatcga
    31921 ttatattcta tccaaagggg ggtaaaggtt gcagggagag cgccccggca ctagactacc
    31981 cgcctcttat tttagtctga gtcagtgtca tgcgcgttac cgatttcttc tttgaattgc
    32041 ccgaatccct gattgcccac taccccatgc ctgaacgcag tagctgtcgt ttactgtcgc
    32101 tggacgggcc tacgggcgcg ctgacgcacg gtactttcac cgatttactc gataagctca
    32161 accccggcga tcttctggtt tttaataata ctcgcgtgat cccggcgcgc ctgtttgggc
    32221 gtaaagccag cggcggcaag attgaagtgc tggttgagcg gatgctcgac gacaaacgca
    32281 ttcttgcgca tattcgcgcc tcgaaagcgc caaaacctgg cgcagaactg ctgctgggcg
    32341 atgacgaaag tattaacgca acaatgaccg cgcgccacgg cgcactgttt gaagtcgaat
    32401 tcaatgatga tcgttcggta ctggatatcc tcaacagtat cgggcatatg ccgctgccgc
    32461 cgtatatcga ccgtccggac gaagacgctg accgcgaact ttatcaaacc gtttatagcg
    32521 aaaaaccggg cgcggttgca gccccgaccg ctggtctgca ttttgacgag cctttgctgg
    32581 aaaaattgcg cgccaaaggc gtggagatgg cgtttgtgac gttgcacgtt ggtgcgggca
    32641 ccttccagcc ggtgcgcgtc gacaccattg aagatcacat catgcactcg gaatacgctg
    32701 aagtaccgca ggatgtggta gacgcggtac tggcggcgaa agcgcgcggt aaccgggtga
    32761 ttgcggttgg caccacttca gtacgttcgc tggaaagcgc ggctcaggca gcgaaaaacg
    32821 atctcattga accgttcttc gacgataccc aaatctttat ctatccgggc ttccagtaca
    32881 aagtggtcga tgcgctggtg acgaacttcc acttgccaga gtcgacgctg attatgctgg
    32941 tttcggcctt tgccggttat caacacacca tgaacgccta taaagcagcg gtagaagaga
    33001 aatatcgctt ttttagttac ggtgatgcga tgtttattac gtacaatccg caggcaatta
    33061 atgagcgcgt cggggagtaa ttccgcggcg ctggtttaaa acgttggact gtttttctga
    33121 cgtagtggag aaaaaatgaa atttgaactg gacaccaccg acggtcgcgc acgccgtggc
    33181 cgcctggtct ttgatcgtgg cgtagtggaa acgccttgtt ttatgcctgt tggcacctac
    33241 ggcaccgtaa aagggatgac gccggaagaa gttgaagcca ctggcgcgca aattatcctc
    33301 ggcaacacct tccacctgtg gctgcgcccg ggccaggaaa tcatgaaact gcacggcgat
    33361 ctgcacgatt ttatgcagtg gaaggggccg atcctcaccg actccggggg cttccaggtc
    33421 ttcagccttg gcgatattcg taaaatcacc gaacagggcg tgcacttccg taacccgatc
    33481 aacggcgatc caattttcct cgatcctgaa aaatcaatgg agattcagta cgatcttggt
    33541 tcggatatcg tcatgatctt tgatgagtgt acgccgtatc ctgctgactg ggattacgca
    33601 aaacgctcca tggagatgtc tctgcgttgg gcgaagcgta gccgtgagcg ttttgacagt
    33661 ctcggaaaca aaaatgcgct gtttggtatc attcagggca gcgtttacga agatttacgt
    33721 gatatttctg ttaaaggtct ggtagatatc ggttttgatg gctacgctgt cggcggtctg
    33781 gctgtgggtg agccgaaagc agatatgcac cgcattctgg agcatgtatg cccgcaaatt
    33841 ccggcagaca aaccgcgtta cctgatgggc gttggtaaac cagaagacct ggttgaaggc
    33901 gtacgtcgtg gtatcgatat gtttgactgc gtaatgccaa cccgcaacgc ccgaaatggt
    33961 catttgttcg tgaccgatgg cgtggtgaaa atccgcaatg cgaagtataa gagcgatact
    34021 ggcccactcg atcctgagtg tgattgctac acctgtcgca attattcacg cgcttacttg
    34081 catcatcttg accgttgcaa cgaaatatta ggcgcgcgac tcaacaccat tcataacctt
    34141 cgttactacc agcgtttgat ggcgggttta cgcaaggcta ttgaagaggg taaattagag
    34201 agcttcgtaa ctgattttta ccagcgtcag gggcgagaag taccaccttt gaacgttgat
    34261 taatattaat aatgagggaa atttaatgag cttttttatt tctgatgcgg tagcggcaac
    34321 gggtgcaccg gcgcaaggta gcccgatgtc tttgattttg atgctggtgg tattcggtct
    34381 gattttctat ttcatgatcc tgcgtccaca gcagaagcgc accaaagaac acaaaaagct
    34441 gatggactcc attgccaaag gtgatgaagt tctgacgaac ggtggcctgg ttggtcgcgt
    34501 aaccaaagta gcggaaaacg gctacattgc tatcgcgctg aatgacacca ctgaagtagt
    34561 tattaaacgt gacttcgtag ctgccgtcct gccgaaaggc accatgaagg cgctgtaatt
    34621 aaaatttttc cctaagggaa ttgccgtgtt aaaccgttat cctttgtgga agtacgtcat
    34681 gctgatcgtg gtgattgtca tcggtctgct gtatgcgctt cccaacctgt ttggtgagga
    34741 tccggctgtt cagatcactg gtgcgcgcgg agtcgccgcc agtgagcaaa cgctgatcca
    34801 ggtccagaaa acgttacaag aagaaaaaat aactgctaag tctgtggcac tggaagaggg
    34861 cgctattctt gcgcgcttcg actccactga cacccagctg cgcgctcgtg aagcattaat
    34921 gggcgttatg ggtgacaaat acgtcgtggc gcttaacctt gccccggcaa cgccgcgctg
    34981 gctggcagct attcacgctg agccgatgaa gctcggcctt gacctgcgtg gcggcgttca
    35041 cttcctgatg gaagtggata tggacaccgc gcttggcaaa ctccaggaac aaaatatcga
    35101 tagcctgcgc agcgatctgc gtgaaaaggg catcccgtat accaccgttc gtaaagaaaa
    35161 caactacggc ctgagcatta ctttccgcga tgctaaagct cgtgatgaag ccattgcgta
    35221 tctgagcaag cgccatccgg acctggtgat tagtagccag ggcagcaacc agctgcgtgc
    35281 ggtaatgagc gatgctcgtc tgagtgaagc gcgtgaatat gcggtgcagc agaacatcaa
    35341 tatcctgcgt aaccgtgtaa accaacttgg cgtagcggag ccggtggttc agcgtcaggg
    35401 tgctgaccgt atcgttgttg aactgccagg tattcaggac actgcgcgtg cgaaagagat
    35461 tctgggtgcg acggcaacgc tggaattccg tctggtaaac accaacgttg accaggccgc
    35521 tgcggcatcc ggtcgcgtac cgggcgactc tgaagtgaaa cagacccgcg aaggtcagcc
    35581 agttgtgctg tacaaacgcg taattctgac cggtgaccat atcaccgact ccacttccag
    35641 ccaggacgaa tacaaccaac cgcaggttaa catctcgctc gatagcgctg gtggtaacat
    35701 catgtctaac ttcactaagg acaacatcgg caaaccgatg gcaaccctgt ttgtggagta
    35761 caaagacagc ggtaagaaag atgcaaatgg tcgtgcggtt ctggtgaaac aggaagaggt
    35821 gattaacatc gccaacatcc agtctcgtct gggtaacagc ttccgtatca ccggcatcaa
    35881 caacccgaac gaagcccgtc agctgtcact gctgctgcgt gccggtgcgt tgatcgcgcc
    35941 gattcagatt gttgaagaac gtaccattgg cccaaccctg ggtatgcaga acattgaaca
    36001 ggggctggag gcttgccttg ccggtctgct ggtttctatt ctgttcatga tcatcttcta
    36061 taagaagttt ggtctgattg cgaccagtgc tctgattgcc aacttgatct taatcgtcgg
    36121 cattatgtcg ctgttgccag gcgcaacgct gagtatgcca ggtatcgcgg gtatcgtctt
    36181 aacccttgcg gtggcggtcg atgcgaacgt actgatcaac gaacgtatta aagaagagtt
    36241 gagcaacgga cgtactgttc aacaggcaat tgatgaaggt tatcgtggcg cattcagttc
    36301 tatcttcgat gcgaacatca ccacgctgat taaagtcatc atcctgtacg cagtgggtac
    36361 cggggcaatt aaagggttcg cgattactac cggtatcggt gtggcgacgt cgatgtttac
    36421 cgcgattgtc ggtacgcgtg ccatcgtaaa cctgctatat ggcggcaagc gcgtcaagaa
    36481 gctgtcaatc tgaggagtgc gatgtggcac aggaatatac tgttgaacaa ctaaaccacg
    36541 gccgtaaagt ctatgacttt atgcgctggg actactgggc tttcggcatc tctggtctgc
    36601 tgttaatcgc cgctatcgtt attatgggcg tgcgcggctt taactggggg ctggatttca
    36661 ccggtggtac ggttatcgaa attacgctcg aaaaaccggc tgaaattgac gtaatgcgtg
    36721 atgcattgca aaaagccggt tttgaagagc caatgctgca aaactttggt agcagccacg
    36781 acatcatggt ccgtatgccg cctgctgaag gcgaaaccgg cggtcaggtg ctgggcagcc
    36841 aggttctgaa ggtgattaac gaatccacca atcagaatgc agcagtgaag cgtattgagt
    36901 tcgtcggtcc gagcgtgggg gcagacctta cgcaaaccgg tgcgatggcg ttgatggcgg
    36961 cgctgctgtc tatccttgtg tacgtaggtt ttcgctttga gtggcgactg gcggcagggg
    37021 ttgttattgc gctggcgcac gacgttatca ttacgctggg tattttgtcg ttattccata
    37081 tcgagattga cctgaccatt gtggcatcgt tgatgtcggt tatcggttac tcgcttaacg
    37141 acagtatcgt ggtatcggac cgtattcgtg aaaacttccg caagatccgt cgcggtacgc
    37201 cttacgaaat ctttaacgtg tccttgaccc agacgctgca ccgtaccttg atcacatccg
    37261 gtactacctt gatggttatc ctgatgctgt acctcttcgg tggtccggta ctggaaggct
    37321 tctcgctgac catgcttatc ggtgtttcta tcggtactgc atcttccatc tatgtggcat
    37381 ctgcgttggc tctgaaactg ggtatgaagc gcgaacacat gttgcagcag aaagtggaaa
    37441 aagaaggggc ggatcagccg tcaattctgc cgtaatcaag ttcccgttga tgttgaaaat
    37501 cccggtcaga agatcgggat tttttttgat gtatggagat tgcgaaaatc cccgcatctt
    37561 gggaaactgc gcgtaaccct acatttcatc caggtaactc ttcatggcta tcatcccaaa
    37621 aaactatgcg cggttagaaa gcggctatcg cgaaaaagca ttaaaaatat atccgtgggt
    37681 ctgcggtcgc tgttcccgcg agtttgttta ttccaacctg cgtgaactta ccgttcacca
    37741 cattgatcac gaccatacca ataacccgga agatggcagt aactgggaat tgctttgtct
    37801 ctattgccac gatcatgagc attcgaaata taccgaagcg gatcagtatg gtacgaccgt
    37861 tatcgcaggg gaagatgcgc agaaagatgt cggtgaagcg aagtacaacc cattcgctga
    37921 cctgaaagcg atgatgaaca agaagaagtg attaaaacgt aaaattgcct gatgcgctac
    37981 gcttatcagg cctacgttat ttcagcaata tattgaattt acgtgctttt gtgggccgga
    38041 caaagcgttt acgccgcatc cggcatgaac aaagctcacg ttgttaacaa tcagaaatgc
    38101 cgggaataaa tcccggcatt ttcataatca gaagttgtaa cctactacca ggtaaccacc
    38161 ccagccggta gagcgaacgt tgaagttgcc gttgccgaag ttcagttctg catcgtcgtt
    38221 ccactgacca ccgtcgtgcc agtaacgagc tacgacagag tagtgccagt gatcgtagtt
    38281 cagagccaga atatggctgg aagcgataga gttattagta cgggtcttaa taccgttgat
    38341 tgcgttaccg ctgtcatccc ctaaatcgga accccagtcg aagttggtga agccgatgta
    38401 gctcagctga ccgccccaca gatcggtaat cggcacaaag tatttaattt tgaaacggta
    38461 accgtcccac tcgttttcgt tcgctgcgcc atagttctgc cactggtatt tcgcatagac
    38521 gttcatggac aggctcatcg gcagaccagt atcgatgtcg gtacccagac ccatgtacca
    38581 ggtgctctgg cgaccatttt tattacgacc catgtcgtaa atgtagttgt tcgcgaagta
    38641 ccactctttg aacggaccga agttaaggtc agtattggtc agcttgtcga tggagaaacg
    38701 tggttcgatt tccataaaca gcggagaacc gtggttccag atacctttag catcggagtt
    38761 accgccgaag aataccggcg catccgcata accatagaag tcgaaccagt cttttttagc
    38821 gaatgcttcg tactcaaggt aggtatcgtt gcggatctgc ggtccgaaac gggtgtgata
    38881 gcttccgaca acgttaacgc tctggtgcca ccagtcggaa agatactgcg gtttgtcgtt
    38941 ttcagctgcg ttgacagtaa aagacgaaga gagcgccagt accgcaccgg ctgccagtaa
    39001 tgtttttttc atatgtatgc cactgtttga aaatcccttg cgggagtgaa aaaggcgcaa
    39061 attgcgtttc taaatatttc gtatacagag gagcctatta taaaaatcat tgctcacaaa
    39121 aatatgtttc gtttcacagt tctatcattt acgtaatcga ttgcgttcac gtttacacac
    39181 attcgggcgg ggattgtact gactttcgcc cttgttgcaa acttttacta tcaatccagg
    39241 tgatgtaagc agagtaacaa aatgacgggg aaagatgttg cgggacgcac aaaatcgtcc
    39301 cgaaatacgt ttactgcata acaggttgaa tgtcgtggat acgtacaaag cctaactgat
    39361 ccacagaaat cccctttaat tgtaacggaa tatcaacatc gctgggggcg aggacgctgg
    39421 caggggcatt aatcaattga ttctgcacat tgatttcctg aaagttgtct attgttccct
    39481 gaatttgccc atattcaaca gttccgctga atgcgggcaa gggatcattc gactcaccct
    39541 gaatacgtag tgtaagggtg gtgccatctg tatcaggcgt aatattcacc agcgacatac
    39601 gtaaagtacc gatctggctt tccagtcttg ccggtgtttt cgctccaggc agaaggtaac
    39661 ccccactgct ggattttgca ttcagcctgt tttgctgagt gattttgact gtttcttgat
    39721 tgagttgcgt catctcctgg ttcagcgtgc tgacgctgtg tttcatctgt cgcacttcac
    39781 tttgctgcac acaggcgcta aggctgaaca ggcttcccag caggagcagt cgaaaaacgt
    39841 tagtattcat aggtcgtccc tttctcgtcg caattagcct aatggtagag ggtaaaagca
    39901 gcgaaagcat cgatccttta tctcaaaagc gttgcgcctt tgttgtatcg tcagttcagg
    39961 gtaaaataga tttccgttaa ccacctggtc aggacgccgt atgcattgcc cattctgttt
    40021 cgccgtggac actaaggtaa ttgactctcg tctcgtgggc gagggttcat ccgtacgccg
    40081 ccgtcggcag tgtctggtgt gtaatgaacg tttcaccacc tttgaagtgg cggagctggt
    40141 tatgccgcgt gttgtaaaaa gcaacgacgt gcgtgaaccg tttaatgaag agaaattgcg
    40201 tagcggaatg ctgcgggcgc tggaaaaacg tccggtgagt tccgatgacg ttgaaatggc
    40261 aatcaatcat attaaatcgc agctgcgcgc caccggtgag cgcgaagtac cgagcaagat
    40321 gattggcaat ctggtgatgg agcaattgaa aaagctcgat aaagtcgcct atatccgttt
    40381 tgcctctgtc taccgcagtt tcgaagatat caaagaattt ggcgaagaga tcgcgcgcct
    40441 ggaggactaa gccgtgcagg acgagtatta catggcgcgg gcgctaaagc tggcgcaacg
    40501 aggacgtttt accacccacc ccaacccaaa tgtcgggtgc gtcattgtca aagatggcga
    40561 aattgtcggt gaaggttacc atcaacgagc gggtgaacca catgccgaag tacacgcgtt
    40621 gcgtatggcg ggtgaaaaag ccaaaggtgc aacggcgtat gtgacactcg aaccttgcag
    40681 ccatcacggc cgtacgccgc cttgctgtga tgctttaatt gccgcaggtg tggcgcgcgt
    40741 ggttgcctcg atgcaagatc ctaacccgca ggtcgctggg cgtggacttt accgtctgca
    40801 acaggctggc attgacgtca gccacggcct gatgatgagt gaagccgagc aattgaataa
    40861 aggctttctc aagcggatgc gcaccggctt tccttatatt cagttaaaac ttggcgcatc
    40921 gcttgatggt cgcacggcga tggcgagcgg cgaaagccag tggatcactt cgccccaggc
    40981 gcggcgtgat gtacaacgac tgcgcgcgca aagtcatgcc attttaacca gcagcgccac
    41041 ggtgctggcg gatgatcctg ccttaacggt gcgttggtcc gaactggatg aacaaactca
    41101 ggcgctctac ccgcaacaaa atctccgcca gccggtacgt attgtgattg atagccaaaa
    41161 tcgcgtgacg ccggaacatc acattgtgca gcagcccggc gaaacctggt tcgcgcgtac
    41221 gcaggaagat tctcgtgagt ggccggaaac ggtgcgtacc ttgctgattc cagagcataa
    41281 aggtcatctg gatctggttg tactgatgat gcaactgggt aaacagcaga ttaacagcat
    41341 ctggggggaa gcggggccaa cgctcgctgg cgcattgctg caggcgggtt tagtcgatga
    41401 gctgattgtc tatatcgcac ctaaactatt aggcagcgac gcccgtggat tatgcaccct
    41461 gccagggctt gagaaattag ccgacgcccc ccaatttaaa ttcaaagaga tacgtcatgt
    41521 aggcccggat gtttgcctgc atttagtggg tgcatgatct cccggctcga aagggaagca
    41581 gcgcacgaaa tattatgcta aaatccgccc ccctgcgggg ccatactcga acccgaagga
    41641 agaaaatgaa cattattgaa gctaacgttg ctaccccgga cgctcgcgtc gccatcacca
    41701 tcgcgcgttt caacaacttt atcaatgaca gcctgctgga aggtgcaatt gacgcactga
    41761 aacgtatcgg tcaggtaaaa gatgaaaaca ttaccgttgt ttgggtgcct ggtgcctatg
    41821 agctgccgct ggcggcgggt gcactggcta aaaccggtaa atacgacgcg gtgattgcgc
    41881 tgggtacggt tattcgtggt ggcactgccc attttgaata tgtcgctggt ggtgcaagca
    41941 acggcctggc gcatgttgcc caggacagcg aaattccggt tgcttttggg gttctgacca
    42001 ctgaaagcat tgaacaagcg atcgaacgtg ctggcaccaa agctggcaac aaaggtgcag
    42061 aagctgcact gaccgcgctt gaaatgatta atgtattgaa agccatcaag gcctgaaatt
    42121 agtaagggga aatccgtgaa acctgctgct cgtcgccgcg ctcgtgagtg tgccgtccag
    42181 gcgctctact cctggcagtt gtcccagaac gacatcgctg atgttgaata ccagttcctg
    42241 gctgaacagg atgtaaaaga cgttgacgtc ctgtacttcc gtgagctgct ggccggggtg
    42301 gcgactaata ccgcatacct cgacggactg atgaagccat acctgtcccg tctgctggaa
    42361 gaactgggac aggtagaaaa agcagtactg cgcattgcgc tgtacgaact gtctaaacgt
    42421 agcgatgtgc catacaaagt ggccattaac gaagcgatcg aactggcgaa atcgttcggc
    42481 gcagaagaca gccataagtt cgtcaacggt gtactcgata aagcagcacc tgtgattcgc
    42541 cctaacaaaa agtaatatcc aggccggtag attcacggaa gaccgttcca tgatcgccgg
    42601 ccttttcttt tttacctgct gaggcataac gtatggcatg tggcgagttc tccctgattg
    42661 cccgttattt tgaccgtgta agaagttctc gtcttgatgt cgaactgggc atcggcgacg
    42721 attgcgcact tctcaatatc cccgagaaac agaccctggc gatcagcact gatacgctgg
    42781 tggcgggcaa ccacttcctc cctgatatcg atcctgctga tctggcgtat aaagcactgg
    42841 cggtgaacct aagcgatctg gcagcgatgg gggccgatcc ggcctggctg acgctggcat
    42901 taaccttgcc ggacgtagac gaagcgtggc ttgagtcctt cagcgacagt ttgtttgatc
    42961 ttctcaatta ttacgatatg caactcattg gcggcgatac cacgcgtggg ccattatcaa
    43021 tgacgttggg tatccacggc tttgttccga tgggacgagc cttaacgcgc tctggggcga
    43081 aaccgggtga ctggatctat gtgaccggta caccgggcga tagcgccgcc gggctggcga
    43141 ttttgcaaaa ccgtttgcag gttgccgatg ctaaagatgc ggactacttg atcaaacgtc
    43201 atctccgtcc atcgccgcgt attttacagg ggcaggcact gcgcgatctg gcaaattcag
    43261 ctatcgatct ctctgacggt ctgatttccg atctcgggca tatcgtgaaa gccagcgact
    43321 gcggcgtacg tattgacctg gcattgctgc cgttttctga tgcgctttct cgccatgttg
    43381 aaccggaaca ggcgctgcgc tgggcgctct ctggcggtga agattacgag ttgtgtttca
    43441 cggtgccgga actgaaccgt ggagcgctgg atgtggctct cggacacctg ggcgtaccgt
    43501 ttacctgtat cgggcaaatg accgccgata tcgaagggct ttgttttatt cgtgacggtg
    43561 aacctgttac gttagactgg aaaggatatg accattttgc cacgccataa agatgtcgcg
    43621 aaaagtcgcc tgaagatgag taatccgtgg catctacttg ctgtcggatt cggaagtgga
    43681 ttaagcccga tcgttcctgg gacgatgggc tcgctggcag cgattccgtt ctggtatctg
    43741 atgacctttt tgccctggca gctctactcg ctggtggtga tgctggggat ctgtatcggc
    43801 gtctatcttt gtcatcagac cgcaaaagat atgggcgtgc acgatcacgg cagcattgtc
    43861 tgggacgaat ttattggtat gtggatcacg ctcatggcgc tgccgaccaa tgactggcag
    43921 tgggttgccg ccgggtttgt gattttccgt attctggata tgtggaaacc gtggccgatc
    43981 cgctggtttg atcgcaatgt gcatggcggc atggggatca tgatagatga tattgtcgcc
    44041 ggggtgatct ccgctggcat cctgtacttt attggtcatc actggccgct gggcattctg
    44101 tcgtagttgt gcaccgatgc ctgatgtgac gcttgttgcg tctcatcagg cctggactct
    44161 tatttaaatc ctactaccgg atgcggttta tacggcgttt ccagttcggc aatctgttcc
    44221 ggcttcaaag tgatatccac cgcgttcaat agctcatcaa gctgttcttc ccgcgatgta
    44281 ccgataatcg gtgcggcaat gcccggttta ctcaacaacc aagccagcgc aacttgtgct
    44341 cgtgttgcac cgagttcttc actgacgccc gttaaccgct ctgcgatctg cgcgtcattt
    44401 tcatcgcttt ctttatagag atttttcccc acctcatcag acaccagtcg tgcggtagtt
    44461 tctccccacg gacgcgtcag tcgcccccgc gccagcgggc tccacggaat caccgccacg
    44521 ccctcctgat aaaacagtgg cagcatctcg cgctcttctt cgcgataaat cagattgtag
    44581 tgatcctgca tactgacaaa ctgcgcccag ccgtgctgtt tttggagttc cagtgcctga
    44641 gcaaactgcg aagcgtgcat tgatgacgcg ccgatataac gcgctttccc ggcttttacc
    44701 acgtcgttca gggcttccag cgtctcttcg atcggcgtgt tgtaatccca gcgatgaatt
    44761 tgcaggatat cgacataatc catgccgaga cgtcgcaggc tgtcgtcgat agagcgcaaa
    44821 atttgtgcac gggataatcc ttccggtaaa tcaccaacgc gatggaacac tttggtggca
    44881 acgaccacgt cttcacgacg ggcgaaatcc cgcagtgcgc gaccaacgat ctcttcgctg
    44941 ctaccatcgg aatagctatt ggcggtatca aagaaattta tgccgccttc cagtgcgcgt
    45001 ttaattatgg gacggctgct ctcttccggc agtgtccatg cgtgattacc acgatctggc
    45061 tcgccaaagg tcatagagcc gaggcaaagt cgggaaacgc gaaggtcggt ttttcctaag
    45121 gggttgtatt gcatgctgcc actcctgcca tgaataattt cttaagcata gcaggagtgg
    45181 agtagggatt atgccagcca ggccttgatt ttggcttcca taccggcggc atcgaggccg
    45241 agttcggcgc gcatttcttc ctgcgttcct tgcggaataa agaagtcagg caggccaatg
    45301 ttcagcacgg ggactggttt acgatgggcc attagcactt cgttcactcc gctgcctgca
    45361 ccgcccataa tggcgttttc ttctacggta accagtgctt catgactggc ggccatttcc
    45421 agaattaacg cttcatcaag cggtttcaca aaacgcatat cgaccagcgt ggcgttcagc
    45481 gattcggcga ctttcgccgc ttctggcatc agcgtaccaa agttaaggat cgccagtttc
    45541 tcgccacgac gcttcacaat gcctttgcca attggtagtt tttccagcgg cgtcagttcc
    45601 acgccgaccg cgttgccacg cgggtagcgc accgctgacg ggccatcgtt atagtgatag
    45661 ccggtataga gcatctggcg acattcgttt tcatcgctcg gggtcataat gaccatttcc
    45721 ggtatgcagc gcaggtaaga gagatcaaaa gcaccctgat gggtttgacc gtcagcacca
    45781 acaatgcccg cgcggtcgat ggcgaacagg accggaagct tttgaattgc cacgtcatgc
    45841 agcacctgat cataggcgcg ttgcaggaaa gtggagtaga tcgcgacaat gggtttgtac
    45901 ccaccaatcg ccagaccggc ggcaaaggtc actgcgtgtt gctcggcaat tgccacgtcg
    45961 aagtagcgat ccgggaattt acgagaaaac tcgaccatgc cggaaccttc acgcatcgcc
    46021 ggagtaatcg ccatcagctt gttatctttc gccgccgttt cgcacaacca gtcgccaaag
    46081 atttttgaat agctcggtaa accgccgcta cttttcggca aacaaccgct ggagggatca
    46141 aatttaggca cggcgtggaa agtgattggg tctttttctg ccggttcata accacgacct
    46201 tttttggtca tgatatgcag gaactgcggg cctttcaggt cacgcatgtt cttcagcgtg
    46261 gtgataagcc ccagcacatc gtgaccgtca accgggccga tgtagttaaa gcccagctct
    46321 tcaaacaacg tgccagggac taccatgcct ttaatatgtt cttcggtacg tttgagcagc
    46381 tctttaatgg gtggcacgcc agagaaaact tttttcccgc cttcgcgcag tgaagagtaa
    46441 agcttaccgg aaagcagctg cgccagatgg ttgttgagcg cgccgacatt ttcggaaatc
    46501 gacatttcgt tgtcgttgag gaccaccagc atatcaggac ggatatcgcc cgcgtgattc
    46561 atcgcttcaa acgccatgcc tgcggtaatc gcgccatcgc cgattacaca gacggtacgg
    46621 cgatttttgc cttctttctc ggcagcaacc gcaataccaa ttccggcact gatggaggtt
    46681 gatgaatgcc cgacgcttaa tacgtcatat tcgctttcgc cgcgccacgg gaacgggtgc
    46741 aggccgcctt tctgacggat ggtgccgatt ttgtcgcggc gtccggtcaa aattttatgc
    46801 ggataagcct gatgccccac atcccaaatc aattggtcaa acggggtgtt gtagacatag
    46861 tgcagcgcca cggtcagttc gaccgtgccc agcccggagg cgaagtgccc gctggaacgg
    46921 ctcacgctgt cgagtaaata gcggcgcagt tcgtcgcaga gtttcggtaa actctctttc
    46981 ggcaacagtc gtaactcctg ggtggagtcg accagtgcca gggtcgggta tttggcaata
    47041 tcaaaactca tcaggggcct attaatactt attgtttatt tattacgctg gatgatgtag
    47101 tccgctagcg cttccagtgc cgaggtatcg ggtgactgtt cagccagttg tttcagcgac
    47161 tgacgggcat cgtcgatcag atcccgggct ttcttccggg cttgctcaag acccagaagt
    47221 gcagggtagg tacttttacc aagttgctgg tcggcaccct ggcgttttcc caacgttgca
    47281 gtatctccta ccacatccag gatgtcatcc tgaacctgga aggcaaggcc gatgctctct
    47341 gcgtacttgt cgagtactgg cagagcacga cgccctttat ctccggcgct taatgcacca
    47401 agacgaacgg cggcgcgaat caatgcgccg gttttatgac gatgaatacg ctcaagcgcg
    47461 tccagaggta cgtgtttgcc ttccgcgtct aaatctaatg cctgaccacc gcacattccg
    47521 gcaataccgc tggcgctcgc cagttcagaa atcatcgaaa ttctgtcgcg atccgacact
    47581 tccggcatat cagcatcgct taaaatcgag aacgccagcg tttgtaaagc gtcgccagcg
    47641 agaatcgcgt ttgcttcgcc aaacttcaca tggcaggtcg gcaaaccgcg acgcagatcg
    47701 tcatcatcca tcgccggtaa atcatcatga attaatgagt aagcgtggat acactctacg
    47761 gcggcagcgg gtgcgtccag cgtgtttgtg ctaacgccaa acatatgacc ggtggcataa
    47821 accaggaagg gtcgcagacg cttaccacct aataatgcac catactgcat ggtttcgacc
    47881 acgggagtgt tctgaaaggg cagtggggcg ataaaacggc tcagcgcctg gttggcctgc
    47941 ttaacgcagg cttcgagttg ctgcggaaag tccattactc attgtccggt gtaaaagggg
    48001 ttagagaggc gtcttcattg tcagacagca gaatttgtac gcgctgttcg gcttgttgta
    48061 atttggcctg cccctgacgt gccagctgca cgccgcgttc gaactcgttc agcgcctctt
    48121 ccagcggcag gtcgccactt tccagacggg ttacaatctg ttccagctcg ctcagcgcct
    48181 tttcaaagct ggcgggagcc tcatttttct tcggcataat gaatgtctga ctctcaatat
    48241 ttttcgcccc gtcatggtaa cggactcagg gcaaatagca aataacgcgc aatggtaagg
    48301 tgatgtgcgc agcaaagcga tgttagtggt atacttccgc gcctggatgc agccgcaggt
    48361 gtgggctgct gtatttttcc ctatacaagt cgcttaaggc ttgccaacga accattgccg
    48421 ccatgaagtt tatcattaaa ttgttcccgg aaatcaccat caaaagccaa tctgtgcgct
    48481 tgcgctttat aaaaatcctt accgggaaca ttcgtaacgt tttaaagcac tatgatgaga
    48541 cgctcgctgt cgtccgccac tgggataaca tcgaagttcg tgcaaaagat gaaaaccagc
    48601 gtctggctat tcgcgacgcc ctgacccgta ttccgggtat ccaccatatt ctcgaagtcg
    48661 aagacgtgcc gtttaccgac atgcacgata tttttgagaa agcgttggtt cagtatcgcg
    48721 atcagctgga aggcaaaacc ttctgcgtac gcgtgaagcg ccgtggcaaa catgatttta
    48781 gctcgattga tgtggaacgt tacgtcggcg gcggtttaaa tcagcatatt gagtccgcgc
    48841 gcgtgaagct gaccaatccg gaagtgactg tccatctgga agtggaagac gatcgtctcc
    48901 tgctgattaa aggccgctac gaaggtattg gcggtttccc gatcggcacc caggaagatg
    48961 tgctgtcgct catttccggt ggtttcgact ccggtgtttc cagttatatg ttgatgcgtc
    49021 gcggctgccg cgtgcattac tgtttcttta accttggcgg cgcggcgcat gaaattggcg
    49081 tgcgtcaggt ggcgcattat ctgtggaacc gttttggcag ctcccaccgc gtgcgttttg
    49141 tcgctattaa tttcgaaccg gtcgtcgggg aaattctcga gaaaatcgac gacggtcaga
    49201 tgggcgttat cctcaaacgt atgatggtgc gtgccgcgtc taaagtggct gaacgttacg
    49261 gcgtacaggc gctggtcacc ggcgaagcgc tcggccaggt gtccagtcag acgctgacca
    49321 acctgcgcct gattgataac gtctccgata cgctgatcct gcgtccgctg atttcttacg
    49381 acaaagagca catcatcaac ctggctcgcc agattggcac cgaagacttt gctcgcacga
    49441 tgccggaata ttgcggtgtt atctccaaaa gcccgacggt gaaagcggtt aagtcgaaga
    49501 ttgaagcgga agaagagaaa ttcgacttca gcattctcga taaagtggtt gaagaagcga
    49561 ataacgttga tatccgcgaa atcgccctgc agaccgagca ggaagtggtg gaagtggaaa
    49621 ccgtcaatgg cttcggcccg aacgacgtga tcctcgatat ccgttctatc gatgaacagg
    49681 aagataagcc actgaaagtc gaagggattg atgtagtttc tctgccgttc tataaactga
    49741 gcaccaagtt tggcgatctc gaccagaaca gaacctggct actgtggtgt gagcgcgggg
    49801 tgatgagccg tctgcaggcg ctctatctgc gcgagcaggg ctttaacaat gtgaaggtat
    49861 atcgcccgta atttgtggtt gtaacgtcgc atctggtcag atgcgacgct taccgcatcc
    49921 gacactactc gtaataatta taaatccctg ccgccatcac cagttgtgat gccacttcat
    49981 gggctttctc gcgcccaacc tgcaggtcga taattttcag accaaagtcg atagctgtcc
    50041 ccggcccctg gctggtcagc aattttaccc gtgcatccca gacgacgcgc ttgtcctgcc
    50101 attgttcagc gggaattttg tctttcagcg tcgggaagcc ggtcatatta ccaatcggga
    50161 agatatcgtg cggcaccagc acggtggctg gcgcggcgca aatagccgcg acgatacgcc
    50221 cggaacggtg gaactgttta acggtttcaa ccagcagagt gctatcgcga aaacactctg
    50281 cgcctttaat gccaccaggc agtacgatca cgtcatattc gccatcagcc acctcgacca
    50341 gcggcgcatc cgccagcagc ttcacgccgc gcgagcaggt aattgccagg ttgccatcgc
    50401 tggctacgct ggcagtggtg actttgatac cgccgcgaac caagaggtcg atcgtggtga
    50461 cggcttcagt ctcttcacta ccaggggcga ggcaaaccag tgccgatgcg ctcatattca
    50521 ctctcctttc tttttaccat ttcaaacagg cgggtgtttt ccggtacggc aatcccatgc
    50581 gcgcgggcgc ggcgtaagag aaaaccattg atatagtcga tttcggtgtg gcgcagcgcg
    50641 cggatatcct gcaacatcga cgagatattt tccgctgtgg catcaatcac ctgcatcacg
    50701 taatcacgca aatcttccgc tgaagtatga tgcccttcgc gttcgatcac tgccgcgact
    50761 tcttcgcata tttgcataat ttcttgcgga tgatgacgta attcaccgtt cgggcaattc
    50821 cagatggcgg tcagtggatt aatcacgcag ttgactgcca gcttgcgcca cagctcggcg
    50881 cgaatattgt tatgccaggc aacgtcaggc aacacggttt gtaaaatatc cgccagataa
    50941 ctgtaatcgc catcctgttg ccgtgccgga ccaatatgcg tgataccgtt tgccacatga
    51001 ataatgacat tgccgtcgcg gcgggcggca tgggtggtgg tgcccatcag taatggctgc
    51061 tgaatatttt gcaactcttc gatggtgccc atgccgttgt gaattaacag tattggcgtg
    51121 gttacaggca gtgtggacgc gaggcttttg acggcatcgg aaacctgcca tgctttcagc
    51181 gtcaccagga gcagatcgct ggtggcgaga aaatcgggat cgttggcggt cagcgattcg
    51241 ttaaatatcg aaccatctgt ctcaaccaga ttcgcactac aataaggttg cggtacgcgc
    51301 agccagccct gaacttcatg accctgtttg caaagtgctg taagccataa ttgccctaag
    51361 gcaccgcatc ccaatacggt aattttcatt gttcctcctc acccgcaacc actccgggtg
    51421 ttcaataagg ctatccctta attgtgcatg ctgttgcgac tatgcacaat taagggatac
    51481 gtcctggtgc aggactgtcg gttatttaac tttgcgggta ttatgcttcg catcaaaaat
    51541 gaagggagag gaaaagatgc catctttcga tattgtctct gaagttgatc ttcaggaagc
    51601 acgtaacgcg gtcgataacg cgagccgcga agtggagtcc cgttttgact tccgtaacgt
    51661 tgaagcctca tttgagctga acgacgccag caaaaccatc aaagtgttga gcgagtccga
    51721 tttccaggtc aatcagttgc tggatattct gcgtgccaag ctgctgaagc gcggcattga
    51781 aggcagttca ctggatgtac cggaaaatat cgttcatagc ggtaaaacct ggtttgtgga
    51841 agcgaaactg aagcagggca ttgagagcgc gacccagaaa aaaatcgtca agatgatcaa
    51901 agacagcaaa ctgaaagtgc aggcgcaaat tcagggcgat gagatccgcg tgactggcaa
    51961 atctcgtgat gatttgcagg ctgtcatggc gatggtgcgc ggtggcgatc tgggtcagcc
    52021 gttccagttc aaaaacttcc gcgattaatc gcgacaacct gcgctttgtt catgtcagat
    52081 gcggcatgaa cgcctggttc ggcctacaaa ggcttgtaaa tcaggagctt agtaggcctg
    52141 atgagcgtag cgcagcaggc aatttcgcct cgcttttatg cctggcgaat tgcctgttca
    52201 acatcaaagc gattcgtcac tttgctgtcg attttcacat aagctgaatg ttcttcttct
    52261 gcaatcaaca cttctttgat gccttcagtt tctagcaaac gcacttttaa cgcctcgttt
    52321 gcggcaatgt tcgccgggat ttcaatgcgc aaactgctga catacgccgg ttctttcatg
    52381 gtactggcga ctgccagcca cactgcggcc agcattgcgc cagcgagaaa tacgccctga
    52441 ccgtcaaaca tgccgtcaat ccagccgccc agtgaaccgc caatcgccac gccaagaaac
    52501 tggctggtgg agtaaacacc catcgctgta cctttgtaac ctgctggcga ctctttactg
    52561 ataagtgaag gcagaagggc ttccatcaaa ttaaacgcta caaagaaaag ctgcacgccg
    52621 accaccagtt gccagaactg cgtttgcgcg ttccacaaca caatttccgc aaccacgatc
    52681 aatccgacgc agaagacaaa gacttgcttc attttgcgct taacttcagc gtagataatg
    52741 aaaggcacga ccgagccaaa ggcgattagc attgtcgcca gatagacctt ccagtgttca
    52801 gccgccggga accctgcatc agccagttgt ccgggcaggg caacaaacgt cgacatcagc
    52861 aaaatatgca gacacataat gccaaagttg agtttcagca gccgcggttc cgccagcact
    52921 ttactgaaac tgcctttcac cattccggac tcacgattaa gtacgtgagt gctactgttg
    52981 ggcacaaccc aaatggtcaa cgcaatgccg gtcgttgcca gaatagcgat catccagaac
    53041 agcgcgtgca gcccaagttt gtgagtgatg atcgggccaa gcaccatcgc aatggcaaag
    53101 gtaatgccaa agctcacgcc gataaacgcc attgctttgg tgcggttttg ttcgcgcgtg
    53161 agatcggaaa gcagcgccat aacggcagcg gcaatcgcac cggagccttg tagcgcccgg
    53221 cctagaataa ttccccagat ggagtcagag agcgcagcga taacgctacc ggcggcaaac
    53281 accgccagcc caccgacaat taatggtttg cgaccaatac ggtcggaaag caggccaaac
    53341 ggaatctgaa aaacggcctg agtcagacca taaataccaa tggcaatacc gattaatgct
    53401 tcgctggcac cttgcagagc catgccatac gtggtcagaa ccggcagaac cataaacatg
    53461 cccagcatgc gcaacgagaa tacggtccct aaaccccagg tcgcgcgcct ctcacctggc
    53521 gtcattttat aatcgttcat taccacctct gttttaaatt cgcgactagt gtaaagcggc
    53581 aaacgaatgg ggtaaacatg cggatttttt agtaaatatt tcgagaggga tatgtttcta
    53641 atgctaagaa aaaaggtgcc gtagcacctt tttaatagag aggttttgtt accacacagc
    53701 agccagcagc gtatgcgagt ccggtaccat aaaatcaacg gacatcatca ccgagagggc
    53761 agtgatggcg atgatagaga agccgaacag cttgcgcgcc cagattctgt catcagcaac
    53821 tttataaccg cgcagagcca tacctaacca ccagacgcta accgccgcgg cgaccaccag
    53881 atatttatat ccagcgtaac cgccaagaga gagcatcagc gtggcaacgg caaaggcgat
    53941 gatatacagc gtgatgtgat tcttcgccac cgaaatgcct tttaccactg gcaataccgg
    54001 aatgtttgcc gcctggtaat ccttaaagcg gaaaatggcg atggcatagg agtgaggcat
    54061 ctgccacagg ctgaagatag ccagcaggat cgctgcgccg ctatcgaact cgccggttac
    54121 tgcacagtag ccaatcaccg gcggcgcagc gccggagagc gaaccaatca atgtgccgta
    54181 gactgagtgg cgtttcatgt acaggctata gacgccgaca taaaccacaa agcccatcac
    54241 ccccagccag caggccagcg gattcgcgcc aaaccacagc agcataaagc cagcaatacc
    54301 cagcaaggtg gcgtacacca gcgagacagc aggagagatc aggcctttaa ccagcacccg
    54361 attcttcgtc ctttccatct ttctgtcgat atccctgtcg atgtagttgt taaacacaca
    54421 acccgacgcc acaaccagtg acaccccaac cagcgtgtag ataaacaggg gataatcaat
    54481 gctgcccttt gaggccagca ggaatccccc aatcaccgag atcaggttgc caaagatgat
    54541 gcctggtttc gttacttgca ggtattgctt aaacatcata accgccgctc ttagtgcatc
    54601 atcatgttgt agttgaggtt ccacataatc cagatggagc ctacaaccag gatagcgatg
    54661 attagcacgg tgaagacaaa cgccgtcatg ttccagcctt catctgattt ggtattcatg
    54721 tgcaggaagc acaccagatg caccagaacc tgtaccactg ccattgccag gattgttccc
    54781 agaattacgg ccggagaggc agcccctgtc atcaccatcc agaacggaat caccgtcaga
    54841 atgatcgaca ggataaagcc tgtcatgtag gtttttacgc tgccatggga cgcgccgctg
    54901 tgatcggtag aatgactcat tacatcgccc ccatcagata aacaacagtg aacacacaga
    54961 tccaaaccac atccaggaag tgccagaaca ggctcaggca catgatgcgg gtacggttag
    55021 tgctggtcag gccgcgacga gcgatttgta ccatcagcac cgccatccag ataagaccgg
    55081 aagtgacgtg cagaccgtgc gtgccgacca gcgcaaagaa cgctgacagg aagccgctgc
    55141 gatccggacc catgccgtta acaatcaggt gatggaattc gtagatttcc atcccgataa
    55201 atccggcacc aaacaaacag gtcaacgcca gccaggagat aacctggctt ttgttgtttt
    55261 tgtacatggc gatagccgcc atgccgtagg tgatggagct gaacaacagc aagaaagttt
    55321 caaccagaac gaacggcagt tcgaaaatgt ccttacctgt cgggccgcct gcggtgccgt
    55381 tcaccagaac ggcataggta gcaaacaaga ttgagaacag aatgcagtcg ctcatcaggt
    55441 agatccaaaa tccgaagatt ttggttccgc ctgcatcgtg gtgcccgtgt tcgtgcgcgt
    55501 gggcagtcgc gtgcgtcaaa gtatcagttg ccatttttca gccctgcctt agtaatctca
    55561 tcgaaatgct ggttttccag tttttcgatt tctgccaccg gcacgtagta atccacgtcc
    55621 tcgtcgaagc ttttcacgat ccaggtgatg atcatgcctg cgaagccaac aatcgccagc
    55681 caccagatat gccagatcat ggcgaaaccg aagatggtgg agaaagctgc aatgacgata
    55741 cctgcaccgc tgtttttcgg catatgaatt tcttcatagt ggtcaggctt tttatacgct
    55801 tcgcctttct ctttcatttc ccagaatgca tcacgctcgt gaacgtgcgg cacaacggca
    55861 aagttataga acggaggcgg ggaagagttt gcccactcca gcgtacggcc accccacggg
    55921 tcgccagtca ggtcacggtt ctggtcgcgg tcgcgaatag aaacgtacat ctgaataacg
    55981 aggcagagaa tacccagcgc aatcagtact gcaccgctag ctgcaatcat cagcatggtg
    56041 tggaactgcg ggtcaatctg ctggctcaaa cgacgggtca tgcccatgaa gcccagtgca
    56101 tacagcggca taaaggcaac gaagaagccg atgatccaga accagaacgc gcgtttaccc
    56161 caggtttcat tcagtttgaa accgaacgct ttaggccacc agtaggtcat ccctgcgaag
    56221 cagccgaaga ccacgccgcc gatgataacg ttatggaagt gcgcaatcag gaacaggctg
    56281 ttatgcagaa cgaagtccgc gcccggtact gccagcagca cgccagtcat cccgcccacc
    56341 gagaaagtga cgataaaacc gatggtccac agcatcgcag aatggaacac gatacggccc
    56401 tgatacatgg tgaacagcca gttgaagatc ttcaccccgg tcgggatggc gataatcatt
    56461 gtggtgatac caaagaaggc gtttacgttc gcgcccgcac ccatcgtaaa gaagtggtgc
    56521 agccaaacga tgaacgacag cacggtgata cagacggttg cccataccag cgaggtataa
    56581 ccaaacagac gtttacgcga gaaggttgcc gcaatttcgg agaacacacc gaaaacaggc
    56641 aggatcagga tgtaaacttc cgggtggccc caggcccaaa tcaggttgat gtacatcatc
    56701 atgttgccac ccatatcgtt ggtaaagaaa tgggtgccca gatagcgatc cagggtcaac
    56761 aacgcgacgg taaccgtcag aattgggaag gaagcaataa tcagtacgtt cgcgcacagt
    56821 gatgcccagg taaatactgg catcttgaac atggtcatgc ccggtgcgcg catcttcaga
    56881 atggtaacga agaagttgat accggtaagc gtcgtaccta taccggatag ctggagactc
    56941 catatccagt aatcaacacc gactcccgga ctgtactcta ttcccgatag cggtggatag
    57001 gccagccagc cggtctgcgc aaattcgccc acgccgagag aaacgttaac cagaatcaca
    57061 ccaacaacag taaaccagaa gcttaagttg ttgaggaacg ggaacgcaac gtcacgcgcg
    57121 ccgatctgca gcggaaccac caggttcatc agaccgataa cgaaaggcat cgccacgaag
    57181 aagatcataa tcacgccgtg cgcggtgaag atctgatcgt agtggtgagg tggcaggaag
    57241 cccgcttcgc ccgccgaggc aagagcctgc tggctacgca tcataatggc gtcagcaaaa
    57301 ccacgcagca acatcacaat cgccacgatg atatacatga taccgaggcg tttatggtcg
    57361 acggaggtca gccactcttt ccacaggtag gtccacttac cgaagtaagt gatcaggcca
    57421 acgagcgcca gacctcccaa aataatgcca gcgatcgtaa ccatgacgat aggttcatgg
    57481 aacgggactg catcaagtga taattttccg aacatcttta ttcttcctca acccctttaa
    57541 tgggcggatt ccgcgtggct catgtccatg ccttccatac cttcgtgtgc gctgtgctca
    57601 ccttctggct gggtcatgtc catgctctta ccgtgagcca taaacttgtt aatcacatca
    57661 gcaaacaagt ctggtttcac gttggagaaa tattccacct ggttgtattc gctaggcgcg
    57721 gccagttttt cgaacgcagc catgtcagac atggtgttcg gcgactgctt cgcttttgcg
    57781 acccactggt cgaattcggc gcgatccggt gttgcaatag ctttgaactt catgcctgag
    57841 aagcccgggc cgctgtagct ggcggagata ccgtcataag taccgggttc gttggcgatc
    57901 agatgcaggc gagtctgcat accagccatg gcataaatct ggctacccag acgcggaatg
    57961 aagaaggagt tcatcacgga gttggaggtc actttgaagt acaccggagt gttcgccggg
    58021 aaagcgattt cattcacggt agcaatgccc tgttccgggt agatgaagaa ccatttccag
    58081 tccatggaaa ccacttcgat ggtaatgggc ttctcgtcgt gtgccagcgg cttgctaggc
    58141 tcaagagcgt gagtggtttt ccaggtcagt accgcaagga agatgatgat taagataggt
    58201 accgtccaga ccacagcttc cactttattg gagtgtgacc agttcgggct gtacttagca
    58261 tctttattgc tcgcacgata cttccaggcg aaaccaacag ccatcaagat tgcgggaata
    58321 acgacaatca acatcaggcc aaatgccgtc agtatcagtg aacgttgctc cagaccaatc
    58381 tgtcctttgg gatctaacag cgcagaatta cagccactga gcaatacagt gcctgcaaat
    58441 aatgacaacc atcccaaact tttattgtat ttcctgagtc tcatttaacg acctcaattc
    58501 cacgggatct ggtggcgttt aaagtgtgtg ggcattttat gggaaggtta cattactgta
    58561 aacatgatta aattcctgtt acttggattt gactgtcagg tcacatatgt tgcaaaacat
    58621 atcaagttga ttttaagaag ctgttgcaaa agggcgttat aacgaaaggg gagtgcagaa
    58681 ggagtttgga tgggcaattg gtataaccaa tctggaataa aataattgtt taacaaataa
    58741 ttatcattat ggtgacaatt gggtgggggg aaaataaaga ctcgttagct gaatcgtgta
    58801 agaaaaaata gaattcataa attgcgtcaa taatttccaa acgctaagcc gcacaaaaga
    58861 acaaatatta ttaagcgata ctgatgttta tttagccgta ataattacgg cgagtgatta
    58921 ctacagctaa ataatattta cagattacgt cagatgcgtt tttcgtagag ccagataatc
    58981 cagcaaacca ccaagcacga cgccagaaag ggcgactaaa accccgactt ccagcagagc
    59041 aggcaggaaa gagaagtgcg tcaaatccag cgcgtccatc gtcaacagca gtaaccacac
    59101 ggccaacagg ctgacgcccg ccgccagtgt ccacatggca aaggcataac ctgccggata
    59161 ttcggtacgg gagataaagt tgtcatttac tcgtgtatat tcaagcgtct ggcggcaaac
    59221 cagcagcaaa ataagccccg gtacggcagc ggcgacggag aatagataga atgtcgacca
    59281 gccgtgtgct tcaacaaacc aacccgccac ggggccgaca taaactcgtc ctacagcgga
    59341 aagcgctgag agcagggcaa attgagtagc ggaaaatgac ttattacaca gcgtcattaa
    59401 cagcgcgaca aaggctgatg tgcccatccc gccacagagg ttttcgaaaa agacggctgc
    59461 gcccatgctg tagagatgct tatcagtaat cgacagcagc cagtaaccag cgttagacgc
    59521 accttgtaaa atgccgaaaa tcagcagcgc ccggaacagc gacaggcgct gcatcaaaat
    59581 cccaccgtac aatgcgccca caatggtcgc cagtaagcca agcgttttgt taaccacgcc
    59641 tacttcaccc gcatcaaacc cgacgccgcg aatcaaaaac gtggttgtca ggctcatggc
    59701 gaatgcgtcg cccagcttat acagcacgat aagaagcaaa ataagccagg cattattgcg
    59761 accaaagaaa tctcgcagag gtgcaacaac cgcttgttcc agcgtttttg gcacaggaat
    59821 ggtgtcggtc ggttctggtg caagcaacgt cgcgataata caagggatca acagcgccgc
    59881 catcaaccag tacatgccct gccagcccag ccatttatct gccagccaca gggctaagcc
    59941 gccggaaacc agcatcccta aacggtaacc cagcacgctg attgccgcgc ccgcaccacg
    60001 ttcttctgcc gggagcacat cggttttcca cgcatcgaag acaatatcct gggaggccga
    60061 gcaaaaagcg atcaccaccg ccagtgccgc catccagcgg agttgggtgc caggttcgag
    60121 aaaacccatc gccgcaatgg cgactaataa caggatttgc gtggcgagca gccaaccgcg
    60181 ccgccgccca aaaaatgggg gcgtgtagcg gtccatcagc ggtgaccaga ggaatttaaa
    60241 aacgtaagcc tggcctacca gagagaagaa accaatggtt ttgagatcaa tattctcgac
    60301 cgtcatccag gcctgtaagg taccggatgt cagggcgagc ggtagcccgg aagcaaaacc
    60361 caggatcagc aatatggctg aacgcggctg ttgaaaaata cgtaaatatt gactggacat
    60421 gggcgtctac aggcccggtt tgcaccgggc cagagggcag aaattaacgc gcgttctgct
    60481 tgatgaattc gtgaatgctg gtgtcctgag acatatcagc gatggtatcg gtcagcacac
    60541 tgttaaccgc atcggcgata tttttgttgg aggcctggaa cgcaccttca acgttgtagc
    60601 tggcacgata gtttttggtt attttgttgc cattctgcgc ggtagcgatg atggcgatat
    60661 ccgctttggt agcgatgttg tagcgcacgt tgccctggga cacgtcagca tacagttggc
    60721 taacgatgat ttgcagatta accgggccat tcggaccaac catgtaacca cgcgcggtca
    60781 tctgtttttc cagcacttct tgcagcagga aacgcagatc gcgggaggcg gccagggtaa
    60841 cgatttgatt atcgcgggtg acttttgcca gcgcctgatc ggtacgctga tcggcaccat
    60901 taatgcttac ggtgacgccc atcaggcttg gatcctgctg tggcagtgta atcgtcgggg
    60961 aaacttcaat agttgttggc ggttttgcgc atcctgcaag cataaacaga gcaactaacg
    61021 ggaagaggat ttttttgaac atgttcgggc tctcagagac tcttaagcgt gtttggtaaa
    61081 aattcccgcc atcataacat tgccaacggc gaggggaagt gggtaaggca tgtaaattca
    61141 tcatgttgac gaaataatca cccctggtaa aagaaacgct gatgcgaggc ctgtgtttca
    61201 atctttaaat cagtaaactt catacgcttg acggaaaaac caggacgaaa cctaaatatt
    61261 tgttgttaag ctgcaatgga aacggtaaaa gcggctagta tttaaaggga tggatgacat
    61321 ctcagcgttg tcggaggaga tatttcatga tgatacgtga gcggatagaa gaaaaattaa
    61381 gggcggcgtt ccaacccgta ttcctcgaag tagtggatga aagctatcgt cacaatgtcc
    61441 cagccggctc tgaaagccat tttaaagttg tgctggtcag cgatcgtttt acgggtgaac
    61501 gttttctgaa tcgtcatcga atgatttaca gtactttagc ggaggaactc tctactaccg
    61561 ttcatgcgct ggctctgcat acttacacta ttaaggagtg ggaagggttg caggacaccg
    61621 tctttgcctc tcctccctgt cgtggagcag gaagcatcgc gtaaaaacgc atttgcaact
    61681 gtcggcgctt tttcagtatg ttgctaaaga ttttatgaaa aacggcctgc gggccgtttt
    61741 gttttgtctg gattttgcgc tttttgccca gcattcagac gaaaattgcc cgggaattgt
    61801 gaaaaaatac gcgacagcgc gcaataaccg ttctcgactc ataaaagtga tgccgctata
    61861 atgccgcgtc ctatttgaat gctttcggga tgattctggt aacagggaat gtgattgatt
    61921 ataagaacat cccggttccg cgaagccaac aacctgtgct tgcggggtaa gagttgaccg
    61981 agcactgtga ttttttgagg taacaagatg caagtttcag ttgaaaccac tcaaggcctt
    62041 ggccgccgtg taacgattac tatcgctgct gacagcatcg agaccgctgt taaaagcgag
    62101 ctggtcaacg ttgcgaaaaa agtacgtatt gacggcttcc gcaaaggcaa agtgccaatg
    62161 aatatcgttg ctcagcgtta tggcgcgtct gtacgccagg acgttctggg tgacctgatg
    62221 agccgtaact tcattgacgc catcattaaa gaaaaaatca atccggctgg cgcaccgact
    62281 tatgttccgg gcgaatacaa gctgggtgaa gacttcactt actctgtaga gtttgaagtt
    62341 tatccggaag ttgaactgca gggtctggaa gcgatcgaag ttgaaaaacc gatcgttgaa
    62401 gtgaccgacg ctgacgttga cggcatgctg gatactctgc gtaaacagca ggcgacctgg
    62461 aaagaaaaag acagcgctgt tgaagcagaa gaccgcgtaa ccatcgactt caccggttct
    62521 gtagacagcg aagagttcga aggcggtaaa gcgtctgatt tcgtactggc gatgggccag
    62581 ggtcgtatga tcccgggctt tgaagacggt atcaaaggcc acaaagctgg cgaagagttc
    62641 accatcgacg tgaccttccc ggaagaatac cacgcagaaa acctgaaagg taaagcagcg
    62701 aaattcgcta tcaacctgaa gaaagttgaa gagcgtgaac tgccggaact gactgcagaa
    62761 ttcatcaaac gtttcggcgt tgaagatggt tccgtagaag gtctgcgcgc tgaagtgcgt
    62821 aaaaacatgg agcgcgagct gaagagcgcc atccgtaacc gcgttaagtc tcaggcgatc
    62881 gaaggtctgg taaaagctaa cgacatcgac gtaccggctg cgctgatcga cagcgaaatc
    62941 gacgttctgc gtcgccaggc tgcacagcgt ttcggtggca acgaaaaaca agctctggaa
    63001 ctgccgcgcg aactgttcga agaacaggct aaacgccgcg tagttgttgg cctgctgctg
    63061 ggcgaagtta tccgcaccaa cgagctgaaa gctgacgaag agcgcgtgaa aggcctgatc
    63121 gaagagatgg cttctgcgta cgaagatccg aaagaagtta tcgagttcta cagcaaaaac
    63181 aaagaactga tggacaacat gcgcaatgtt gctctggaag aacaggctgt tgaagctgta
    63241 ctggcgaaag cgaaagtgac tgaaaaagaa accactttca acgagctgat gaaccagcag
    63301 gcgtaattta cgcagcataa cgcgctaaat tcgcacaaag gcccgtcacc gccaggtggt
    63361 gggctttttt tgtcatgaat tttgcatgga accgtgcgaa aagcctcttt cggtgttagc
    63421 gtaacaacaa aagattgtta tgcttgaaat atggtgatgc cgtacccata acacagggac
    63481 tagctgataa tccgtccata aggttacaat cggtacagca ggttttttca attttatcca
    63541 ggagacggaa atgtcataca gcggcgaacg agataacttt gcaccccata tggcgctggt
    63601 gccgatggtc attgaacaga cctcacgcgg tgagcgctct tttgatatct attctcgtct
    63661 acttaaggaa cgcgtcattt ttctgactgg ccaggttgaa gaccacatgg ctaacctgat
    63721 tgtggcgcag atgctgttcc tggaagcgga aaacccagaa aaagatatct atctgtacat
    63781 taactcccca ggcggggtga tcactgccgg gatgtctatc tatgacacca tgcagtttat
    63841 caagcctgat gtcagcacca tctgtatggg ccaggcggcc tcgatgggcg ctttcttgct
    63901 gaccgcaggg gcaaaaggta aacgtttttg cctgccgaat tcgcgcgtga tgattcacca
    63961 accgttgggc ggctaccagg gccaggcgac cgatatcgaa attcatgccc gtgaaattct
    64021 gaaagttaaa gggcgcatga atgaacttat ggcgcttcat acgggtcaat cattagaaca
    64081 gattgaacgt gataccgagc gcgatcgctt cctttccgcc cctgaagcgg tggaatacgg
    64141 tctggtcgat tcgattctga cccatcgtaa ttgatgccag aggcgcaact gtgccgctat
    64201 acttatccag ggcggcacaa cgctgtaagc ggcttgcgcc tgagaatggc atttgcgtcg
    64261 tcgtgtgcgg cacaaagaac aaagaagagg ttttgaccca tgacagataa acgcaaagat
    64321 ggctcaggca aattgctgta ttgctctttt tgcggcaaaa gccagcatga agtgcgcaag
    64381 ctgattgccg gtccatccgt gtatatctgc gacgaatgtg ttgatttatg taacgacatc
    64441 attcgcgaag agattaaaga agttgcaccg catcgtgaac gcagtgcgct accgacgccg
    64501 catgaaattc gcaaccacct ggacgattac gttatcggcc aggaacaggc gaaaaaagtg
    64561 ctggcggtcg cggtatacaa ccattacaaa cgtctgcgca acggcgatac cagcaatggt
    64621 gtcgagttgg gcaaaagtaa cattctgctg atcggtccga ccggttccgg taaaacgctg
    64681 ctggctgaaa cgctggcgcg cctgctggat gttccgttca ccatggccga cgcgactaca
    64741 ctgaccgaag ccggttatgt gggtgaagac gttgaaaaca tcattcagaa gctgttgcag
    64801 aaatgcgact acgatgtcca gaaagcacag cgtggtattg tctacatcga tgaaatcgac
    64861 aagatttctc gtaagtcgga caacccgtct attacccgtg acgtttccgg tgaaggcgta
    64921 cagcaggcac tgttgaaact gatcgaaggt actgttgctg ccgttccacc gcagggcggg
    64981 cgtaagcatc cgcagcagga atttttgcag gttgatacct ccaagatcct gtttatttgt
    65041 ggcggtgcgt ttgccggtct ggataaagtg atttcccacc gtgtagaaac cggctccggc
    65101 attggttttg gcgcgacggt aaaagcgaag tccgacaaag caagcgaagg cgagctgctg
    65161 gcgcaggttg aaccggaaga tctgatcaag tttggtctta tccctgagtt tattggtcgt
    65221 ctgccggttg tcgcaacgtt gaatgaactg agcgaagaag ctctgattca gatcctcaaa
    65281 gagccgaaaa acgccctgac caagcagtat caggcgctgt ttaatctgga aggcgtggat
    65341 ctggaattcc gtgacgaggc gctggatgct atcgctaaga aagcgatggc gcgtaaaacc
    65401 ggtgcccgtg gcctgcgttc catcgtagaa gccgcactgc tcgataccat gtacgatctg
    65461 ccgtccatgg aagatgtcga aaaagtggtt atcgacgagt cggtaattga tggtcaaagc
    65521 aaaccgttgc tgatttatgg taagccggaa gcgcaacagg catctggtga ataattaacc
    65581 attcccatac aattagttaa ccaaaaaggg gggattttat ctccccttta atttttcctc
    65641 tattctcggc gttgaatgtg ggggaaacat ccccatatac tgacgtacat gttaatagat
    65701 ggcgtgaagc acagtcgtgt catctgatta cctggcggaa attaaactaa gagagagctc
    65761 tatgaatcct gagcgttctg aacgcattga aatccccgta ttgccgctgc gcgatgtggt
    65821 ggtttatccg cacatggtca ttcccttatt tgtcgggcgg gaaaaatcta tccgttgtct
    65881 ggaagcggcg atggaccatg ataaaaaaat tatgctggtc gcgcagaaag aagcttcaac
    65941 ggatgagccg ggtgtaaacg atcttttcac cgtcgggacc gtggcctcta tattgcagat
    66001 gctgaaactg cctgacggca ccgtcaaagt gctggtcgag gggttacagc gcgcgcgtat
    66061 ttctgcgctc tctgacaatg gcgaacactt ttctgcgaag gcggagtatc tggagtcgcc
    66121 gaccattgat gagcgggaac aggaagtgct ggtgcgtact gcaatcagcc agttcgaagg
    66181 ctacatcaag ctgaacaaaa aaatcccacc agaagtgctg acgtcgctga atagcatcga
    66241 cgatccggcg cgtctggcgg ataccattgc tgcacatatg ccactgaaac tggctgacaa
    66301 acagtccgtt ctggagatgt ccgacgttaa cgaacgtctg gaatatctga tggcaatgat
    66361 ggaatcggaa atcgatctgc tgcaggttga gaaacgcatt cgcaaccgcg ttaaaaagca
    66421 gatggagaaa tcccagcgtg agtactatct gaacgagcaa atgaaagcta ttcagaaaga
    66481 actcggtgaa atggacgacg cgccggacga aaacgaagcc ctgaagcgca aaatcgacgc
    66541 ggcgaagatg ccgaaagagg caaaagagaa agcggaagca gagttgcaga agctgaaaat
    66601 gatgtctccg atgtcggcag aagcgaccgt agtgcgtggt tatatcgact ggatggtaca
    66661 ggtaccgtgg aatgcgcgca gcaaggtcaa aaaagacctg cgtcaggcgc aggaaatcct
    66721 tgataccgac cattatggtc tggagcgcgt gaaagatcgc atccttgagt accttgcggt
    66781 tcaaagccgt gtcaacaaaa tcaagggacc gatcctctgc ctggtagggc cgccgggggt
    66841 aggtaaaacc tctcttggtc agtccattgc caaagccacc gggcgtaaat atgtccgtat
    66901 ggcgctgggc ggcgtgcgtg atgaagcgga aatccgtggt caccgccgta cttacatcgg
    66961 ttctatgccg ggtaaactga tccagaaaat ggcgaaagtg ggcgtgaaaa acccgctgtt
    67021 cctgctcgat gagatcgaca aaatgtcttc tgacatgcga ggcgatccgg cctctgcact
    67081 gcttgaagtg ctggatccag agcagaacgt agcgttcagc gaccactacc tggaagtgga
    67141 ttacgatctc agcgacgtga tgtttgtcgc gacgtcgaac tccatgaaca ttccggcacc
    67201 gctgctggat cgtatggaag tgattcgcct ctccggttat accgaagatg aaaaactgaa
    67261 catcgccaaa cgtcacctgc tgccgaagca gattgaacgt aatgcactga aaaaaggtga
    67321 gctgaccgtc gacgatagcg ccattatcgg cattattcgt tactacaccc gtgaggcggg
    67381 cgtgcgtggt ctggagcgtg aaatctccaa actgtgccgc aaagcggtta agcagttact
    67441 gctcgataag tcattaaaac atatcgaaat taacggcgat aacctgcatg actacctcgg
    67501 tgttcagcgt ttcgactatg gtcgcgctga taacgaaaac tgtgtcggtc aggtaaccgg
    67561 tctggcgtgg acggaagtgg gcggtgactt gctgaccatt gaaaccgcat gtgttccggg
    67621 taaaggcaaa ctgacctata ccggttcgct cggcgaagtg atgcaggagt ctattcaggc
    67681 ggcgttaacg gtggttcgtg cgcgtgcgga aaaactgggg atcaaccctg atttttacga
    67741 aaaacgtgac atccacgtcc acgtaccgga aggtgcgacg ccgaaagatg gtccgagtgc
    67801 cggtattgct atgtgcaccg cgctggtttc ttgcctgacc ggtaacccgg ttcgtgccga
    67861 tgtggcaatg accggtgaga tcactctgcg tggtcaggta ctgccgatcg gtggtttgaa
    67921 agaaaaactc ctggcagcgc atcgcggcgg gattaaaaca gtgctaattc cgttcgaaaa
    67981 taaacgcgat ctggaagaga ttcctgacaa cgtaattgcc gatctggaca ttcatcctgt
    68041 gaagcgcatt gaggaagttc tgactctggc gctgcaaaat gaaccgtctg gcatgcaggt
    68101 tgtgactgca aaatagtgac ctcgcgcaaa atgcactaat aaaaacaggg ctggcaggct
    68161 aattcgggct tgccagcctt tttttgtctc gctaagttag atggcggatc gggcttgccc
    68221 ttattaaggg gtgttgtaag gggatggctg gcctgatata actgctgcgc gttcgtacct
    68281 tgaaggattc aagtgcgata taaattataa agaggaagag aagagtgaat aaatctcaat
    68341 tgatcgacaa gattgctgca ggggctgata tctctaaagc tgcggctggc cgtgcgttag
    68401 atgctattat tgcttccgta actgaatctc tgaaagaagg ggatgatgta gcactggtag
    68461 gttttggtac ttttgccgtt aaagagcgtg ctgcccgtac tggccgcaac ccgcagaccg
    68521 gtaaagagat caccatcgct gctgctaaag taccgagctt ccgtgcaggt aaagcactga
    68581 aagacgcggt aaactaagcg ttgtccccgg tggggatgtg acgaagttca agggcgcatc
    68641 tactgatgtg ccttttttat ttgtattcgg tgactttctg cgtcttgtgg gctgacaatt
    68701 gcccccgttt cttgtcacaa taggcctttg cgcgcatcga tacgttgcgt gaggtacaca
    68761 gtcatctaca gcggagtgtt gttacaccat gatggacagc ttacgcacgg ctgcaaacag
    68821 tctcgtgctc aagattattt tcggtatcat tatcgtgtcg ttcatattga ccggcgtgag
    68881 tggttacctg attggcggag gcaataacta cgccgcaaaa gtgaatgacc aggaaatcag
    68941 ccgtgggcag ttcgagaacg cctttaacag cgagcgtaat cgcatgcagc aacagctggg
    69001 cgatcaatac tccgagctgg cagcgaatga aggctatatg aaaaccctgc gtcaacaggt
    69061 gctgaatcgt ctgatcgacg aggcgctgtt ggatcagtac gctcgtgagc tgaaactggg
    69121 tatcagtgat gagcaggtta aacaggcgat tttcgcgacc ccagccttcc aggttgacgg
    69181 caaatttgat aacagccgct ataacggtat cctcaaccag atggggatga ccgccgatca
    69241 gtacgcccag gcgctgcgta accagctcac tacccaacag ctgattaacg gtgttgccgg
    69301 taccgatttt atgctgaaag gtgaaaccga cgagctggcg gcactggtcg cgcaacaacg
    69361 cgtggtgcgt gaggcgacta tcgatgttaa cgcgctggcg gcgaagcagc ctgtgaccga
    69421 acaggagatt gccagctact acgaacaaaa caaaaacaat ttcatgacgc cggaacaatt
    69481 ccgcgtgagt tacatcaagc tggatgccgc aacgatgcag caaccggtta gcgatgcgga
    69541 tatccagagc tactacgatc agcatcagga tcaattcacc cagccgcagc gtacccgcta
    69601 cagcatcatc cagaccaaaa ctgaagatga agcgaaagcg gtacttgatg agctgaataa
    69661 aggcggtgat tttgctgcat tagccaaaga aaaatctgcc gatattatct ctgcccgtaa
    69721 cggcggcgat atgggttggt tagaagatgc cactatcccc gacgaactga aaaatgctgg
    69781 tctgaaagaa aaaggccaac tgtctggtgt catcaaatct tcggtcggtt tcctgattgt
    69841 acgtctggac gacattcagc cagcgaaagt gaaatcgtta gacgaagtac gtgacgacat
    69901 tgcggcgaaa gtgaaacacg aaaaagccct cgatgcgtac tatgcgctgc agcagaaagt
    69961 gagcgatgcg gcaagcaacg acaccgagtc tctggccggt gcagagcaag ctgccggcgt
    70021 taaagccact cagacgggtt ggttcagcaa agataacctg ccggaagagt tgaacttcaa
    70081 gccggttgcc gacgctatct ttaacggcgg tctggtaggt gaaaacggcg cgccgggcat
    70141 caactctgac atcatcaccg tagacggcga ccgtgcattc gtgctgcgca tcagcgagca
    70201 caaaccggaa gcggtgaaac cgttggcaga tgttcaggaa caagttaagg cactggttca
    70261 gcacaacaaa gctgaacaac aggcgaaagt ggatgctgag aaactgctgg ttgatttgaa
    70321 agccggcaaa ggtgcggaag ctatgcaggc tgccggtctg aaatttggcg agccgaaaac
    70381 cttaagccgt tccggtcgtg acccgattag ccaggcggcg tttgcactgc cactgccagc
    70441 gaaagacaaa ccgagctacg gtatggcgac cgatatgcaa ggtaatgtgg ttctgctggc
    70501 gctggatgaa gtgaaacaag gttcaatgcc ggaagatcag aaaaaagcga tggtgcaggg
    70561 tatcacccag aacaacgcac aaatcgtctt tgaagctctg atgagtaacc tgcgtaaaga
    70621 ggcgaaaatc aaaattggcg atgcgctgga acagcaataa tcctgaagcc gcctcgcaaa
    70681 aaaatgcgtt gcagctgtaa caagaaaagg tcgctttcgc ggccttttcc atttctgaac
    70741 attgccattt gtttactgtt ttcactgccg ttaaggtgat tccactgtta acaaacaagg
    70801 agaaaacagt atgaaacacg gaattaaagc actgctcatt accctgtccc tggcctgtgc
    70861 cggaatgtct catagcgcgc tggcggcagc ttctgtggcg aaaccgacgg cggtagaaac
    70921 caaagcggaa gctcctgcag cacaaagtaa agcagcagta ccggcgaaag ccagtgacga
    70981 agaaggcacc cgggtcagca ttaataatgc cagcgcggaa gagctagccc gcgcgatgaa
    71041 tggcgttggc ctgaagaaag cgcaggcgat tgtcagttat cgcgaagagt acggtccgtt
    71101 taaaacagtg gaggatctaa agcaggtgcc ggggatgggc aattcgctgg tggaacgtaa
    71161 tctggcggta ttaaccctgt aattaatttg catagtggca attttttgcc agactgaaga
    71221 ggtcatacca gttatgacct ctgtacttat aacaacaacg taaggttatt gcgctatgca
    71281 aacacaaata aaagttcgtg gatatcatct cgacgtttac cagcacgtca acaacgcccg
    71341 ctaccttgaa tttctcgaag aagcccgctg ggatgggttg gaaaatagcg acagttttca
    71401 gtggatgacg gcccataaca tcgccttcgt cgtggtcaat atcaatatta actatcgtcg
    71461 cccagcggta ttaagtgacc tgttaactat taccagtcag ttgcagcaat taaacggtaa
    71521 aagcggcatc ttaagccagg tcattacact ggagccggaa gggcaggtgg tagcggatgc
    71581 gcttattacg tttgtttgta ttgatcttaa aacgcagaaa gcattagctc tggaagggga
    71641 attgcgcgaa aagctggagc agatggttaa gtaaacgttt tgtggtgccg gatgctcaag
    71701 ccgcatccgg cgacacccgg aataattacc tcaacccggt tttctgcttc atcgctgcca
    71761 tcaccgtcgg tttatcggcc agataatgat tcaaaccgtt ggcgcgtaaa ttacatgccg
    71821 cacaatgacc gcaaccgtcg cctttaatgc cgttatagca ggtcaacgtt tcgttacgga
    71881 ctaaatccag tttgccgtaa taatctgcca gcgcccaggt ttccgcttta tcaatccaca
    71941 tcagcggcgt ttcaaaacga atatctttcg ccatgcccaa actgacggca tggtttagtg
    72001 ctttcacaaa ctcatcgcgg caatccgggt agccggagaa atccgtttca cagacgccgg
    72061 taattacggc ttctgctttt acctgatacg catatattgc cgccagcgtc aggaacaaaa
    72121 tattacgccc tgggacaaac gtattcggga tgccatcggc ttcaggttca taatcaggca
    72181 ccggaatgct gtcacgtgtc aggctgctga ccgccagctc gttgagcagc gttacatcaa
    72241 gaaccttatg cgcgcgtgct cccagtttca gcgccagttc gcgtgccacg tcgatttctg
    72301 cgcgatgtcg ctgaccgtaa tcgaacgtca cgcaatggac ttcatcatat tgttgtaatg
    72361 cctgcaccag acaggtggtg gaatcctggc ctccactgaa cacaacgaca gcacgtttca
    72421 tagataatcc tgcttgaaca ataaaagcgt tatggtaacg cctgcgatta acccggacca
    72481 gctattcatt gcgacggcgc gggaagccag gcttcggtaa attcaaacca gccgcgcggt
    72541 gtcagtcgca caccgttcac gccgggaggg gcactaatgc gatagtgata gttgaacagc
    72601 ggcgtcagcg tcgcgtctgc cattaactgg ctaaaaaccg ctttcagggc attaaatcgg
    72661 ttttcctcat caggcattac ttgcaccgcg tccagcgtcg attgcagatg tgcatatgct
    72721 ggagcgtcga aaacatgtgg ccatagtgga tcgcaacgta gccattgctc cagagtatat
    72781 tccggtgctt cgccaattaa tctgtcgccc atcatgaggt ctgcgtgtgc cagtagggtc
    72841 gtgtcgtccc agttttttgc gttatgaaaa ataattgtga gttcacagcc ttccgctgcc
    72901 agtgtcgcct gtaggcgttc tgccatggta tgaagttcta tcggtaggtg ataaaccagc
    72961 gtcaaggttt tcggtagttt gacttcatcc ggtacttgcc agtgcggaat agtccagcct
    73021 ggcagtaatg catgactggc ggtgatcagg ttttctccga cttctaacgt ttgtaataaa
    73081 ccggattgat gaataatgga gatcactttt cgcgcctgcc agagggagag tcggggactt
    73141 ttgcgcaacg ttaaatagca aaaacctaaa ctgatgccac tactgacctg gctgacccgt
    73201 tgcagctcct ccggtttgcc gatggtgatt tgcacgggat gccgacaact ggttcccaaa
    73261 tctttttcga aaagcggcgg agttatccag tactcaaccg ctttaagcag cggatgacgc
    73321 aaatggtaat aatcatggct ctccaggcgc accagctccg ctgtgaattg tgttaagcga
    73381 aaaggaccag tgccgatcag tgggaattgc ggatgcgcca gatggctgca atagctcgcc
    73441 agccggtgcg caagccagta atcggggcga tgtaaaaaga aggtcagaca ctgcggatgg
    73501 gtgacttcaa tacgcttcac gctaataaat aattgatcca gtgctggcag ttgtaacagc
    73561 atcaataatc gctggtgtaa gtgtgaggct tttactgcat cgccgttatg ccagtgtagg
    73621 gttgaacgaa gataaaagtc ccagcgtaac ccgtcagtag aggtttccca gtgatgcgct
    73681 aaatcgccaa tcgggcgctg agtattatta tcgaagcggg tcaggccgga aaatatctgc
    73741 ccggcgagat gctgctcggc acggccgggc aaaaagcctg gttgtagcgg ttcgagcggg
    73801 cgatagtagg gaatacgcaa cgtgggtgta tcgttttgcc attgtccgcc cataaacggc
    73861 tgtaacagag tgcgtagctc acctggggcc agttgcgcca gctccagcac atcttgctgc
    73921 tttccggttt ccagtgcctg ttccatcatc gcattgcgta gcgattccgg cgtgaccaga
    73981 aagcgtaatt gtccgcgctt tccgcgtcct gactgcgcct gccactccag ccatcccgcc
    74041 tcctgtgcct gacgcaacag cgtacgaaca tggcgttcgc tgcaaaaaca gcgttcggcc
    74101 agttcgctga cggtgacggt ttgcggcttt ccggctgaag gttgccacag acgttgatac
    74161 tggttaagac ggttgagcaa tcgcatataa acccggaaca atattattta actattcact
    74221 attacttccg tatatatcag gtgatactca atctccatta accgtgtcac agagtggaga
    74281 aagaaatggc tcgtctggca gcatttgata tggatggcac tttattgatg cctgaccatc
    74341 atttaggtga gaaaaccctc tctactttgg cgcgactgcg tgaacgcgac attaccctca
    74401 cttttgccac ggggcgtcat gcgctggaga tgcagcatat tctcggggcg ctatcgctgg
    74461 atgcatattt gattaccggc aacggaacgc gcgtgcattc tctggaaggt gaacttttac
    74521 atcgtgatga tttacctgcg gatgtcgcgg agctggtgct gtatcagcaa tgggataccc
    74581 gagccagcat gcatatcttc aatgacgacg gttggtttac cgggaaagag atccctgcgt
    74641 tgttgcaggc atttgtctat agcggttttc gttatcagat aatcgatgtc aaaaaaatgc
    74701 cactcggcag cgtcaccaag atctgcttct gtggcgatca cgacgatctt acacgcttgc
    74761 agatccagct atacgaagca ttaggcgagc gtgcacattt gtgtttttcc gccacggatt
    74821 gcctcgaagt gctgccggtg ggctgcaata aaggcgctgc attgacggtg ctgacccaac
    74881 atctaggttt atcgttgcgc gattgcatgg cctttggtga tgcgatgaac gatcgcgaaa
    74941 tgttaggcag cgtcggtagc gggtttatta tgggcaatgc gatgccgcaa ctgcgcgcgg
    75001 agctcccgca tttaccggtg attggacatt gccgaaatca ggctgtctct cactatttga
    75061 cgcactgact ggactatcca catctacctt attcccccga ataatgagat cccttccagc
    75121 accgggcaat tgcccggttt tttttgcgtt gaatttgtca ttttgtgccg tggtgtttaa
    75181 accgcacaga ataaattgtc gtgatttcac ctttaaaata gaattaaaag agaaaaaaat
    75241 tctctgtgga agggctatgt tagataaaat tgaccgtaag ctgctggcct tactgcagca
    75301 ggattgcacc ctctctttgc aggcactggc tgaagccgtt aatctgacaa ccaccccttg
    75361 ctggaagcgc ctgaaacggc tggaggacga cggtatcctt atcggcaaag tcgccctgct
    75421 ggatccggaa aaaataggcc tcggcctgac cgcctttgtg ctgataaaaa cgcaacatca
    75481 cagtagcgaa tggtattgcc gctttgtcac ggtggttacc gaaatgccag aagtgctggg
    75541 gttctggcgc atggctggtg aatacgatta tctgatgcgc gtccaggttg ccgacatgaa
    75601 acgctacgac gagttttata agcgtctggt aaacagcgtg ccggggctgt cggacgtcac
    75661 ttccagcttc gcgatggaac agattaaata caccacttct ttacccatcg aataaatatc
    75721 cagaatcagg tcaggacaca acgcgtgcga ttatttgctc aattaagctg gtatttccgt
    75781 cgggaatggc gtcgctatct cggggctgtc gccttgcttg tcattatcgc gatgctgcaa
    75841 ctggttccgc caaaagtggt tggtattgtt gtcgatggcg tgacagaaca acactttact
    75901 accgggcaga tcctgatgtg gatcgccacc atggtgctga ttgccgttgt ggtttatttc
    75961 ctgcgttacg tctggcgggt attgctgttt ggtgcgtctt atcaactggc tgttgaactg
    76021 cgtgaagatt attaccgtca gctaagccgg cagcatcctg agttttacct gcgtcatcgc
    76081 acgggtgacc tcatggctcg tgcgaccaat gacgtcgatc gcgtcgtgtt tgcagccgga
    76141 gaaggggtgc tgacgctggt ggattcactg gtgatgggct gcgctgtgtt gattatgatg
    76201 tctacgcaaa ttagctggca gttgacctta tttgccctgt tgccgatgcc agtgatggcg
    76261 atcatgatca agcgcaacgg cgatgccttg catgaacgct ttaagctggc acaggcggcg
    76321 ttttctagtc ttaatgaccg cacccaggaa agcctcacca gtatccgcat gatcaaagcc
    76381 tttggtctgg aagatcgcca gtcggcgtta tttgccgcgg atgccgaaga taccggcaaa
    76441 aaaaacatgc gggtggcgcg tattgatgct cgtttcgacc cgaccatcta tatcgcgatt
    76501 ggtatggcga acttgctggc gattggcggc ggtagttgga tggtggtgca gggcagttta
    76561 acgctgggcc agctcaccag ttttatgatg tatttaggtc tgatgatttg gccaatgctg
    76621 gcgctggcat ggatgtttaa cattgtggaa cgtggtagtg ctgcatacag ccgtattcgc
    76681 gcgatgctgg cggaagcgcc ggtggtgaac gatggtagcg aacccgtgcc ggaagggcgt
    76741 ggcgaactgg atgtaaatat tcaccagttc acgtatccgc agactgacca tcctgcgctg
    76801 gaaaacgtca atttcgccct gaaacccggt cagatgctgg gtatctgcgg gccgactggt
    76861 tccggcaaaa gtaccctgtt gtcgctcatt cagcgtcatt tcgacgtcag cgagggggat
    76921 attcgctttc atgatattcc tctgacgaag ttacaactcg atagctggcg tagccgcctg
    76981 gcggtagtta gccagacacc gttccttttt tccgacaccg tagcgaacaa catcgcgttg
    77041 ggttgcccga atgccaccca gcaagagatt gagcatgtcg cgcggttagc cagcgtacat
    77101 gacgatattt tgcgtctacc gcaaggttac gatacagaag tgggcgagcg cggcgtgatg
    77161 ctttccggtg ggcaaaaaca gcgtatctcc attgctcgag cgttattagt caacgcggaa
    77221 atcctcatcc ttgatgatgc gctttcggcg gtggacggac gcacagagca ccagatcctg
    77281 cataacctgc gtcagtgggg acagggaaga acggtaatca tcagtgccca tcgcctttcg
    77341 gcactgacgg aagccagtga aaatgtaatg aacgcatc
//
LOCUS       DADMJE010000003        69857 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.003, whole genome shotgun sequence.
ACCESSION   DADMJE010000003 DADMJE010000000
VERSION     DADMJE010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 69857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 69857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..69857
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.003"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..790
                     /locus_tag="JN001_000160"
     CDS             <1..790
                     /locus_tag="JN001_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9051508.1"
                     /translation="DSLDIKTTLQANDIPGLTTDQVVSVNTRFTQIKSSTVYSAATQT
                     GVCQGDTSRYGPVNIGANTTFTLYVTKPFLGSMTIPKTDIAVIKGAWVDGMGSPSTGD
                     FHDLVKLSIQGNLTAPQSCKINQGDVIKVNFGFINGQKFTTRNAMPDGFTPVDFDITY
                     DCGDTSKIKNSLQMRIDGTTGVVDQYNLVARRRSSDNVPDVGIRIENLGGGVANIPFQ
                     NGILPVDPSGHGTVNMRAWPVNLVGGELETGKFQGTATITVMVR"
     gene            complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JN001_000161"
     CDS             complement(833..1693)
                     /gene="rsmI"
                     /locus_tag="JN001_000161"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HAY9051509.1"
                     /translation="MKQHQSADNSQGQLYIVPTPIGNLADITQRALEVLQAVDLIAAE
                     DTRHTGLLLQHFGINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTPLINDPG
                     YHLVRTCREAGIRVVPLPGPCAAITALSAAGLPSDRFCYEGFLPAKSKGRRDALKAIE
                     AEPRTLIFYESTHRLLDSLEDIVAVLGESRYVVLARELTKTWETIHGAPVGELLAWVK
                     EDENRRKGEMVLIVEGHKAQEEDLPADALRTLALLQAELPLKKAAALVAEIHGVKKNA
                     LYKYALEQQG"
     gene            1757..3784
                     /locus_tag="JN001_000162"
     CDS             1757..3784
                     /locus_tag="JN001_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HAY9051510.1"
                     /translation="MVPSTFSRLKAARCLPVVLAALIFAGCGTHTPDQSTAYMQGTAQ
                     ADSAFYLQQMQQSSDDTRINWQLLAIRALVKEGKTGQAVELFNQLPQELNDSQRREKT
                     LLAVEIKLAQKDFAGAQNLLAKITPADLEQNQQARYWQAKIDASQGRPSIDLLRALIA
                     QEPLLGAKEKKQNIDATWQALSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDP
                     DMMKAGIADWQKRYPNNPGAKMLPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTI
                     QQGFEAAKNIGTQPVAAQVAAADVAEQPQPQTADGVASPAQASVSDLTGDQPAAQPVP
                     VSAPATSTAAVSAPANPSAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEEL
                     LKSNTPLNVLVLNQPENIENRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSS
                     LGDRVANAFAQEWQKLGGGTVLQQKFGSTSELRAGVNGGSGIALTGTPITPRATTDSG
                     MTTNNPTLQTTPTDDQFTNNGGRVDAVYIVATPGEIAFIKPMIAMRNGSQSGAMLYAS
                     SRSAQGTAGPDFRLEMEGLQYSEIPMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDA
                     WSLANHFSQMRQVQGFEINGNTGSLTANPDCVINRKLSWLQYQQGQVVPAS"
     gene            3742..4137
                     /locus_tag="JN001_000163"
     CDS             3742..4137
                     /locus_tag="JN001_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HAY9051511.1"
                     /translation="MATVPTRSGSPRQLTTKQTGDAWEVQARRWLEGKGLRFVAANVN
                     ERGGEIDLIMREGWTTVFVEVRYRRSALYGGAAASVTRSKQHKLLQTARLWLARHNGS
                     FDTVDCRFDVVAFTGNEVEWIKDAFNDHS"
     gene            4157..4747
                     /gene="diaA"
                     /locus_tag="JN001_000164"
     CDS             4157..4747
                     /gene="diaA"
                     /locus_tag="JN001_000164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA initiator-associating protein DiaA"
                     /protein_id="HAY9051512.1"
                     /translation="MQERIKACFTESIQTQIAAAEALPDAISRAAMTLVQSLLNGNKI
                     LCCGNGTSAANAQHFAASMINRFETERPSLPAIALNTDNVVLTAIANDRLHDEVYAKQ
                     VRALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVE
                     IRIPSHRSARIQEMHMLTVNCLCDLIDNTLFPHQDD"
     gene            4757..5332
                     /gene="yraP"
                     /locus_tag="JN001_000165"
     CDS             4757..5332
                     /gene="yraP"
                     /locus_tag="JN001_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divisome-associated lipoprotein YraP"
                     /protein_id="HAY9051513.1"
                     /translation="MKALSPIAVLISALLLQGCVAAAVVGTAAVGTKAATDPRSVGTQ
                     VDDGTLEVRVNSALSKDEQIKKETRINVTAYQGKVLLVGQSPNAELSARAKQIAMGVD
                     GANEVYNEIRQGQPIGLGEASNDTWITTKVRSQLLTSDLVKSSNVKVTTENGEVFLMG
                     LVTEREAKAAADIASRVSGVKRVTTAFTFIK"
     gene            complement(5446..6486)
                     /locus_tag="JN001_000166"
     CDS             complement(5446..6486)
                     /locus_tag="JN001_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY9051514.1"
                     /translation="MTGQSSSQAATPIQWWKPALFFLVVIAGLWYVKWQHYYGKAFTA
                     AETHSIGKSILAQADANPWQAALDYAMIYFLAVWKAAVLGVILGSLIQVLIPRDWLLR
                     TLGQSRFRGTLLGTLFSLPGMMCTCCAAPVAAGMRRQQVSMGGALAFWMGNPVLNPAT
                     LVFMGFVLGWGFAAICLVAGLVMVLLIATLVQKWVRETPQTQAPVEIDIPEARSGFFS
                     RWGRALWTLFWSTIPVYILAVLVLGAARVWLFPHADGAVDNSLMWVVAMAVAGCLFVI
                     PTAAEIPIVQTMMLAGMGTAPALALLMTLPAVSLPSLIMLRKAFPAKALWLTGAMVAV
                     SGVIVGGLALLF"
     gene            complement(6559..7194)
                     /locus_tag="JN001_000167"
     CDS             complement(6559..7194)
                     /locus_tag="JN001_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417621.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-binding protein"
                     /protein_id="HAY9051515.1"
                     /translation="MSQVLITGATGLVGGHLLRMLINEPKVNAIAAPTRRPLGDMPGV
                     FNPHDPQLSDALAQVTEPIDIVFCCLGTTRREAGSKEAFIHADYTLVVDTALTGRRLG
                     AQHMLVVSAMGANAHSPFFYNRVKGEMEEALIAQNWPKLTIARPSMLLGDRSKQRMNE
                     TLFAPLFRLLPGNWKSIDARDVARVMLAEAMRPEHEGVTILSSSELRKRAE"
     gene            7322..7840
                     /gene="yhbO"
                     /locus_tag="JN001_000168"
     CDS             7322..7840
                     /gene="yhbO"
                     /locus_tag="JN001_000168"
                     /EC_number="3.5.1.124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417622.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein/nucleic acid deglycase"
                     /protein_id="HAY9051516.1"
                     /translation="MSKKIAVLISDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVK
                     GKKGEASVTIDKSIDEVTPAEFDALLLPGGHSPDYLRGDNRFVTFTRDFVNSGKPVFA
                     ICHGPQLLISADVIRGRKLTAVKPIIIDVKNAGAEFYDQEVVVDKDQLVTSRTPDDLP
                     AFNREALRLLGA"
     gene            complement(7820..8263)
                     /locus_tag="JN001_000169"
     CDS             complement(7820..8263)
                     /locus_tag="JN001_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhbP family protein"
                     /protein_id="HAY9051517.1"
                     /translation="METLITISRWLAKQHVVTWCVQQEGELWCANAFYLFDAQKVAFY
                     ILTEEKTRHAQMSGPQAAVAGTVNGQPKTVALIRGVQFKGEIRRLEGEESDLARKAYN
                     HRFPVARMLSAPVWEIRLDEIKFTDNTLGFGKKMIWLRDSGTEQA"
     gene            8314..8616
                     /gene="yhbQ"
                     /locus_tag="JN001_000170"
     CDS             8314..8616
                     /gene="yhbQ"
                     /locus_tag="JN001_000170"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708956.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage response exodeoxyribonuclease YhbQ"
                     /protein_id="HAY9051518.1"
                     /translation="MTPWFLYLIRTADNKLYTGITTDVERRYQQHQSGKGAKALRGKG
                     ELTLAFSAPVGDRSLALRAEYRVKQLTKRQKERLVAEGAGFAELLSSLQTPEIKSD"
     gene            complement(8603..9106)
                     /locus_tag="JN001_000171"
     CDS             complement(8603..9106)
                     /locus_tag="JN001_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY9051519.1"
                     /translation="MLIRVEIPIDAPGIDALLRRSFESDAEAKLVHDLREDGFLTLGL
                     VATDDEGQVIGYVAFSPVDVQGEDLQWVGMAPLAVDEKYRGQGLARQLVYEGLDSLNE
                     FGYAAVVTLGDPALYSRFGFELAAHHDLRCRWPGTESAFQVHRLADDALNGVTGLVEY
                     HEHFNRF"
     gene            complement(9100..9624)
                     /locus_tag="JN001_000172"
     CDS             complement(9100..9624)
                     /locus_tag="JN001_000172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SCP2 domain-containing protein"
                     /protein_id="HAY9051520.1"
                     /translation="MLDKLRSRIVHLGPSLLSVPVKLTPFALKRQVLEQVLSWQFRQA
                     LDDGELEFLEGRWLSIHVRDIDLQWFTSVVNGKLVVSQNAQADVSFSADVSDLLMIAA
                     RKQDPDTLFFQRRLVIEGDTELGLHVKNLMDAIELEQMPKALRMMLLQLADFVEAGMK
                     TAPETKQTSVGEPC"
     gene            9833..10813
                     /locus_tag="JN001_000173"
     CDS             9833..10813
                     /locus_tag="JN001_000173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017457364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY9051521.1"
                     /translation="MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTE
                     KKLQEAVSFVHQHRRKLHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEY
                     AAERYPNIERHVSVQASATNEEAINFYHRHFDVARVVLPRVLSIHQVKQLARVTPVPL
                     EVFAFGSLCIMSEGRCYLSSYLTGESPNTVGACSPARFVRWQQTPQGLESRLNEVLID
                     RYQDGENAGYPTLCKGRYLVDGERYHALEEPTSLNTLELLPELMAANIASVKIEGRQR
                     SPAYVSQVAKVWRQAIDRCKADPQSAWMETLGSMSEGTQTTLGAYHRKWQ"
     gene            10822..11700
                     /locus_tag="JN001_000174"
     CDS             10822..11700
                     /locus_tag="JN001_000174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312067.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HAY9051522.1"
                     /translation="MKYSLGPVLWYWPKETLEDFYQQAATSSADVIYLGEAVCSKRRA
                     TKVGDWLEMAKSLAGSGKQIVLSTLALVQASSELGELKRYVENGEFLIEASDLGVVNM
                     CAERKLPFVAGHALNCYNAVTLKILLKQGMMRWCMPVELSRDWLVNLLNQCDELGIRN
                     QFEVEVLSYGHLPLAYSARCFTARSEDRPKDECETCCIKYPNGRNVLSQENQQVFVLN
                     GIQTMSGYVYNLGNELTSMQGLVDVVRLSPQGTDTFAMLDAFRANENGAAPLLLTANS
                     DCNGYWRRLAGLELQA"
     gene            11906..12913
                     /locus_tag="JN001_000175"
     CDS             11906..12913
                     /locus_tag="JN001_000175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="luciferase-like monooxygenase"
                     /protein_id="HAY9051523.1"
                     /translation="MTDKTIAFSLLDLAPIPEGSSAREAFSHSLDLARLAEKRGYHRY
                     WLAEHHNMTGIASAATSVLIGYLAANTTTLHLGSGGVMLPNHSPLVIAEQFGTLNTLY
                     PGRIDLGLGRAPGSDQRTMMALRRHMSGDIDNFPRDVAELVDWFDARDPNPHVRPVPG
                     YGEKIPVWLLGSSLYSAQLAAQLGLPFAFASHFAPDMLFQALHLYRSNFKPSARLEKP
                     YAMVCINIIAADSNRDAEFLFTSMQQAFVKLRRGETGQLPPPIQNMDQFWSPSEQYGV
                     QQALSMSLVGDKAKVRHGLQSILRETDADEIMVNGQIFDHQARLHSFELAMDVKEELL
                     G"
     gene            complement(13031..14275)
                     /gene="mtr"
                     /locus_tag="JN001_000176"
     CDS             complement(13031..14275)
                     /gene="mtr"
                     /locus_tag="JN001_000176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan permease"
                     /protein_id="HAY9051524.1"
                     /translation="MATLTTTQTSPSLLGGVVIIGGTIIGAGMFSLPVVMSGAWFFWS
                     MAALIFTWFCMLHSGLMILEANLNYRIGSSFDTITKDLLGKGWNVVNGISIAFVLYIL
                     TYAYISASGSILHHTFAEMSLNVPARAAGFGFALLVAFVVWLSTKAVSRMTAIVLGAK
                     VITFFLTFGSLLGHVQPATLFNVAESNASYAPYLLMTLPFCLASFGYHGNVPSLMKYY
                     GKDPKTIVKCLVYGTLMALALYTIWLLATMGNIPRPEFIGIAEKGGNIDVLVQALSGV
                     LNSRSLDLLLVVFSNFAVASSFLGVTLGLFDYLADLFGFDDSAMGRLKTALLTFAPPV
                     VGGLLFPNGFLYAIGYAGLAATIWAAIVPALLARASRKRFGSPKFRVWGGKPMITLIL
                     VFGVGNALVHILSSFNLLPVYQ"
     gene            complement(14429..16318)
                     /locus_tag="JN001_000177"
     CDS             complement(14429..16318)
                     /locus_tag="JN001_000177"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH family ATP-dependent RNA helicase"
                     /protein_id="HAY9051525.1"
                     /translation="MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGR
                     DVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMR
                     GVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADE
                     MLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
                     DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALN
                     GDMNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIG
                     RTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQ
                     QQLESSDLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKR
                     EFRDRDDRGPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAI
                     ANEGDISSRYIGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPH
                     TGGERRGGGRGFGGERREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRR
                     FGGDA"
     gene            complement(16311..16391)
                     /gene="yrbN"
                     /locus_tag="JN001_000178"
     CDS             complement(16311..16391)
                     /gene="yrbN"
                     /locus_tag="JN001_000178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YrbN"
                     /protein_id="HAY9051526.1"
                     /translation="MKIADQFHDELCRLAAINFEAHVLHG"
     gene            complement(16498..17382)
                     /gene="nlpI"
                     /locus_tag="JN001_000179"
     CDS             complement(16498..17382)
                     /gene="nlpI"
                     /locus_tag="JN001_000179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020802045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpI"
                     /protein_id="HAY9051527.1"
                     /translation="MKPFLRWCFVATALTLAGCSNTSWRKSEVLAVPLQPTLQQEVIL
                     ARMEQILASRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFNYL
                     GIYLTQAGNFDAAYEAFDSVLELDPTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQDD
                     PNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGNISEQTLMER
                     LKADATDNTSLAEHLSETNFYLGKYYLSLGDSDSATALFKLAVANNVHNFVEHRYALL
                     ELSLLGQDQDDLAESDQQ"
     gene            complement(17491..19626)
                     /gene="pnp"
                     /locus_tag="JN001_000180"
     CDS             complement(17491..19626)
                     /gene="pnp"
                     /locus_tag="JN001_000180"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312072.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HAY9051528.1"
                     /translation="MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTV
                     VGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPIRPL
                     FPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQ
                     YVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQN
                     INELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSE
                     TIATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVL
                     PRTHGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGM
                     VGSPKRREIGHGRLAKRSVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLAL
                     MDAGVPIKAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSREGISALQMD
                     IKIEGITKEIMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIK
                     DVIGKGGSVIRALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRV
                     YTGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQ
                     GRIRLSIKEATEQSQPAAAPEAPAAEQGE"
     gene            complement(19874..20143)
                     /gene="rpsO"
                     /locus_tag="JN001_000181"
     CDS             complement(19874..20143)
                     /gene="rpsO"
                     /locus_tag="JN001_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004933502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HAY9051529.1"
                     /translation="MSLSTEATAKIVSEFGRDANDTGSTEVQVALLTAQINHLQGHFA
                     EHKKDHHSRRGLLRMVSQRRKLLDYLKRKDVARYTQLIERLGLRR"
     gene            complement(20292..21236)
                     /gene="truB"
                     /locus_tag="JN001_000182"
     CDS             complement(20292..21236)
                     /gene="truB"
                     /locus_tag="JN001_000182"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HAY9051530.1"
                     /translation="MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHT
                     GALDPLATGMLPICFGEATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVT
                     FSAEQLAAALDTFRGDIEQIPSMYSALKYQGKKLYEYARQGIEVPREARPITIYELLF
                     IRHEGNELELEIHCSKGTYIRTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEH
                     LRELVEQAEQQDIPAAELLDPLLMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAP
                     LEGLVRVTEGENGKFIGMGEIDDEGRVAPRRLVVEYPA"
     gene            complement(21236..21637)
                     /gene="rbfA"
                     /locus_tag="JN001_000183"
     CDS             complement(21236..21637)
                     /gene="rbfA"
                     /locus_tag="JN001_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001712908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HAY9051531.1"
                     /translation="MAKEFGRPQRVAQEMQKEIALILQREIKDPRLGMMTTVSGVEMS
                     RDLAYAKVYVTFLNDKDEDAVKAGIKALQEASGFIRSLLGKAMRLRIVPELTFFYDNS
                     LVEGMRMSNLVTSVVKHDEERRVNPDDSKED"
     gene            complement(21801..24449)
                     /gene="infB"
                     /locus_tag="JN001_000184"
     CDS             complement(21801..24449)
                     /gene="infB"
                     /locus_tag="JN001_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HAY9051532.1"
                     /translation="MTDVTIKTLAAERQTSVERLVQQFADAGIRKSADDSVSAQEKQT
                     LIDHLNQKNSGPDKLTLQRKTRSTLNIPGTGGKSKSVQIEVRKKRTFVKRDPQEAERL
                     AAEEQARREAEESAKREAQQKAEREAAEQAKREAAEQAKREAAEKDKVSNQQDDMTKN
                     AQAEKARREQEAAELKRKAEEEARRKLEEEARRVAEEARRMAEENKWTDNAEPTEDSS
                     DYHVTTSQHARQAEDESDREVEGGRGRGRNAKAARPKKGNKHAESKADREEARAAVRG
                     GKGGKRKGSSLQQGFQKPAQAVNRDVVIGETITVGELANKMAVKGSQVIKAMMKLGAM
                     ATINQVIDQETAQLVAEEMGHKVILRRENELEEAVMSDRDTGAAAEPRAPVVTIMGHV
                     DHGKTSLLDYIRSTKVASGEAGGITQHIGAYHVETENGMITFLDTPGHAAFTSMRARG
                     AQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAVNKIDKPEADPDRVKNELSQ
                     YGILPEEWGGESQFVHVSAKAGTGIDELLDAILLQAEVLELKAVRKGMASGAVIESFL
                     DKGRGPVATVLVREGTLHKGDIVLCGFEYGRVRAMRNELGQEVLEAGPSIPVEILGLS
                     GVPAAGDEVTVVRDEKKAREVALYRQGKFREVKLARQQKSKLENMFANMTEGEVHEVN
                     IVLKADVQGSVEAISDSLLKLSTDEVKVKIIGSGVGGITETDATLAAASNAILVGFNV
                     RADASARKVIEAESLDLRYYSVIYNLIDEVKAAMSGMLSPELKQQIIGLAEVRDVFKS
                     PKFGAIAGCMVTEGVVKRHNPIRVLRDNVVIYEGELESLRRFKDDVNEVRNGMECGIG
                     VKNYNDVRTGDVIEVFEIIEIQRTIA"
     gene            complement(24474..25961)
                     /gene="nusA"
                     /locus_tag="JN001_000185"
     CDS             complement(24474..25961)
                     /gene="nusA"
                     /locus_tag="JN001_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005131833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HAY9051533.1"
                     /translation="MNKEILAVVEAVSNEKALPREKIFEALESALATATKKKYEQEID
                     VRVQIDRKSGDFDTFRRWLVVDEVTQPTKEITLEAARYEDESLNLGDYVEDQIESVTF
                     DRITTQTAKQVIVQKVREAERAMVVDQFREHEGEIITGVVKKVNRDNISLELGNNAEA
                     VILREDMLPRENFRPGDRVRGVLYSVRPEARGAQLFVTRSKPEMLIELFRIEVPEIGE
                     EVIEIKAAARDPGSRAKIAVKTNDKRIDPVGACVGMRGARVQAVSTELGGERIDIVLW
                     DDNPAQFVINAMAPADVASIVVDEDKHTMDIAVEAGNLAQAIGRNGQNVRLASQLSGW
                     ELNVMTVDDLQAKHQAEAHAAIDTFTKYLDIDEDFSTVLVEEGFSTLEELAYVPMKEL
                     LEIEGLDEPTVEALRERAKNALATIAQAQEESLGDNKPADDLLNLEGIDRDLAFKLAA
                     RGVCTLEDLAEQGIDDLADIEGVTDEKAGALIMAARNICWFGDEA"
     gene            complement(25989..26441)
                     /gene="rimP"
                     /locus_tag="JN001_000186"
     CDS             complement(25989..26441)
                     /gene="rimP"
                     /locus_tag="JN001_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HAY9051534.1"
                     /translation="MSTLEQKLTEMITAPVEALGFELVGIEFIRGHTSTLRIYIDSED
                     GINVDDCADVSHQVSAVLDVEDPITVAYNLEVSSPGLDRPLFTAEHYARFVGEEVTLV
                     LRMAVQNRRKWQGVIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF"
     gene            complement(26648..26724)
                     /locus_tag="JN001_000187"
     tRNA            complement(26648..26724)
                     /locus_tag="JN001_000187"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(26688..26690),aa:Met,seq:cat)
     gene            27072..28415
                     /gene="argG"
                     /locus_tag="JN001_000188"
     CDS             27072..28415
                     /gene="argG"
                     /locus_tag="JN001_000188"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HAY9051535.1"
                     /translation="MTTILKHLPVGQRIGIAFSGGLDTSAALLWMRQKGAVPYAYTAN
                     LGQPDEEDYDAIPRRAMEYGAENARLIDCRKQLVAEGIAAIQCGAFHNTTGGLTYFNT
                     TPLGRAVTGTMLVAAMKEDGVNIWGDGSTYKGNDIERFYRYGLLTNAELQIYKPWLDT
                     DFIDELGGRHEMSEFMIACGFDYKMSVEKAYSTDSNMLGATHEAKDLEYLNSSVKIVN
                     PIMGVKFWDESVKIPAEEVTVRFEQGHPVALNGKTFSNDVEMMLEANRIGGRHGLGMS
                     DQIENRIIEAKSRGIYEAPGMALLHIAYERLLTGIHNEDTIEQYHAHGRQLGRLLYQG
                     RWFDSQALMLRDSLQRWVASQITGEVTLELRRGNDYSILNTVSENLTYKPERLTMEKG
                     DSVFSPDDRIGQLTMRNLDITDTREKLFGYAKTGLLSSSATSGVPQVENMENKGQ"
     gene            complement(28423..30048)
                     /locus_tag="JN001_000189"
     CDS             complement(28423..30048)
                     /locus_tag="JN001_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417641.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY9051536.1"
                     /translation="MTVFNKFARSFKSHWLLYLCVIVFGITNLVASSGAHMVQRLLFF
                     VLTILVVKRISSLPLRLLVAAPFVLLTAADMSISLYSWCTFGTTFNDGFAISVLQSDP
                     DEVVKMLGMYIPYLCAFAFLSLLFWAVIIKYDVSLPTKKVTGILLLIVISGSLFSACQ
                     FAYKDAKNKKTFSPYILASRFATYTPFFNLNYFALAAKEHQRLLSIANTVPYFQLSVR
                     DTGIDTYVLIVGESVRVDNMSLYGYTRSTTPQVEAQRKQIKLFNQAISSAPYTALSVP
                     LSLTADSVLSHDIHNYPDNIINMANQAGFQTFWLSSQSAFRQNGTAVTSIAMRAMETV
                     YVRGFDELLLPHLSQALQQNTQQKKLIVLHLNGSHEPACSAYPQSSAVFQPQDDQDAC
                     YDNSIHYTDSLLGQVFELLKDRRASVMYFADHGLERDPTKKNVYFHGGREASQQAYHV
                     PMFIWYSPVLGDGVDRTTENNIFSTAYNNYLINAWMGVTKPEQPQTLEEVIAHYKGDS
                     RVVDANHDVFDYVMFRKEFTEDKQGNPPPEGQG"
     gene            complement(30507..30593)
                     /locus_tag="JN001_000190"
     tRNA            complement(30507..30593)
                     /locus_tag="JN001_000190"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30557..30559),aa:Leu,seq:gag)
     gene            complement(30608..30940)
                     /gene="secG"
                     /locus_tag="JN001_000191"
     CDS             complement(30608..30940)
                     /gene="secG"
                     /locus_tag="JN001_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HAY9051537.1"
                     /translation="MYEALLVVFLIVAIGLVGLIMLQQGKGADMGASFGAGASATLFG
                     SSGSGNFMTRMTALLATLFFIISLVLGNINSNKTNKGSEWDNLSAPAKTEQTQPAAPA
                     KPTSDIPN"
     gene            complement(31168..32505)
                     /gene="glmM"
                     /locus_tag="JN001_000192"
     CDS             complement(31168..32505)
                     /gene="glmM"
                     /locus_tag="JN001_000192"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003905541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HAY9051538.1"
                     /translation="MSNRKYFGTDGIRGRVGDAPITPDFVLKLGWAAGKVLARHGSRK
                     IIISKDTRISGYMLESALEAGLAAAGLSALFTGPMPTPAVAYLTRTFRAEAGIVISAS
                     HNPFYDNGIKFFSIDGTKLPDAVEEAIEAEMEKEISCVDSAELGKASRIVDAAGRYIE
                     FCKATFPNELSLSELKIVVDCANGATYHIAPNVLRELGANVIAIGCEPNGVNINAEVG
                     ATDVRALQARVLAEKADLGIAFDGDGDRVIMVDHEGNKVDGDQIMYIIAREGLRQGQL
                     RGGAVGTLMSNMGLELALKQLGIPFARAKVGDRYVLEKMQEKGWRIGAENSGHVILLD
                     KTTTGDGIVAGLQVLAAMARNHMSLHDLCSGMKMFPQILVNVRYTAGSGDPLEHESVK
                     AVTAEVEAALGNRGRVLLRKSGTEPLIRVMVEGEDEAQVTEFAHRIADAVKAV"
     gene            complement(32498..33346)
                     /gene="folP"
                     /locus_tag="JN001_000193"
     CDS             complement(32498..33346)
                     /gene="folP"
                     /locus_tag="JN001_000193"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312083.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HAY9051539.1"
                     /translation="MKLFAQGTSLDLSHPHVMGILNVTPDSFSDGGTHNSLIDAVKHA
                     NLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWLSVDTSKPEV
                     IRESAKVGAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAE
                     VNRYFIEQIARCEQAGIAKEKLLLDPGFGFGKNLSHNYSLLARLAEFHHFNLPLLVGM
                     SRKSMIGQLLNVGPSERLSGSLACAVIAAMQGAHIIRVHDVKETVEAMRVVEATLSAK
                     ENKRYE"
     gene            complement(33436..35370)
                     /gene="ftsH"
                     /locus_tag="JN001_000194"
     CDS             complement(33436..35370)
                     /gene="ftsH"
                     /locus_tag="JN001_000194"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HAY9051540.1"
                     /translation="MAKNLILWLVIAVVLMSVFQSFGPSESNGRKVDYSTFLQEVNND
                     QVREARINGREINVTKKDSNRYTTYIPVQDPKLLDNLLTKNVKVVGEPPEEPSLLASI
                     FISWFPMLLLIGVWIFFMRQMQGGGGKGAMSFGKSKARMLTEDQIKTTFADVAGCDEA
                     KEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISG
                     SDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLN
                     QMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFDRQVVVGLPDVRGREQILKVH
                     MRRVPLAPDIDAAIIARGTPGFSGADLANLVNEAALFAARGNKRVVSMIEFEKAKDKI
                     MMGAERRSMVMTEAQKESTAYHEAGHAIIGRLVPEHDPVHKVTIIPRGRALGVTFFLP
                     EGDAISASRQKLESQISTLYGGRLAEEIIYGPEHVSTGASNDIKVATNLARNMVTQWG
                     FSEKLGPLLYAEEEGEVFLGRSVAKAKHMSDETARIIDQEVKALIERNYNRARQLLTD
                     NMDILHAMKDALMKYETIDAPQIDDLMARRDVRPPAGWEEPGASNNSGDNGSPKAPRP
                     VDEPRTPNPGNTMSEQLGDK"
     gene            complement(35470..36099)
                     /gene="rlmE"
                     /locus_tag="JN001_000195"
     CDS             complement(35470..36099)
                     /gene="rlmE"
                     /locus_tag="JN001_000195"
                     /EC_number="2.1.1.166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uridine(2552)-2'-O)-methyltransferase
                     RlmE"
                     /protein_id="HAY9051541.1"
                     /translation="MTGKKRSASSSRWLQEHFSDKYVQQAQKKGLRSRAWFKLDEIQQ
                     SDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLPMDPIVGVDFLQGDFRD
                     ELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGS
                     FVVKVFQGEGFDEYLREIRSLFTKVKVRKPDSSRARSREVYIVATGRKP"
     gene            36225..36518
                     /gene="yhbY"
                     /locus_tag="JN001_000196"
     CDS             36225..36518
                     /gene="yhbY"
                     /locus_tag="JN001_000196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014833438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HAY9051542.1"
                     /translation="MNLSTKQKQHLKGLAHPLKPVVLLGSNGLTEGVLAEIEQALEHH
                     ELIKVKIATEDRETKTLIVEAIVRETGACNVQVIGKTLVLYRPTKERKISLPR"
     gene            complement(36675..37151)
                     /gene="greA"
                     /locus_tag="JN001_000197"
     CDS             complement(36675..37151)
                     /gene="greA"
                     /locus_tag="JN001_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006178768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY9051543.1"
                     /translation="MQAIPMTLRGAEKLREELDFLKSVRRPEIIAAIAEAREHGDLKE
                     NAEYHAAREQQGFCEGRIKDIEAKLSNAQVIDVTKMPNNGRVIFGATVTVLNLDSDEE
                     QTYRIVGDDEADFKQNLISVNSPIARGLIGKEEDDVVVIKTPGGEVEFEVIKVEYL"
     gene            37399..38832
                     /gene="dacB"
                     /locus_tag="JN001_000198"
     CDS             37399..38832
                     /gene="dacB"
                     /locus_tag="JN001_000198"
                     /EC_number="3.4.16.4"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
                     /protein_id="HAY9051544.1"
                     /translation="MRFSRFIIGLTSCIAFSVQAANVDEYVTQLPAGANLALMVQKVG
                     ASAPAIDYHSQQMALPASTQKVITALAALIQLGPDFRFTTTLETKGNVENGVLKGDLV
                     ARFGADPTLKRQDIRNMIATLKKSGVNQIDGNVLIDTSIFASHDKAPGWPWNDMTQCF
                     SAPPAAAIVDRNCFSVSLYSAPKPGDMAFIRVASYYPVTMFSQVRTLPRGSAEAQYCE
                     LDVIPGDLNRFTLTGCLPQRSEPLPLAFAVQDGASYAGAILKDELKQAGITWSGTLLR
                     QTQVNEPGTVVASKQSAPLHDLLKIMLKKSDNMIADTVFRMIGHARFNVPGTWRAGSD
                     AVRQILRQQAGVDIGNTIIADGSGLSRHNLIAPATMMQVLQYIAQHDNELNFISMLPL
                     AGYDGSLQYRAGLHQAGVDGKVSAKTGSLQGVYNLAGFITTASGQRMAFVQYLSGYAV
                     EPADQRNRRIPLVRFESRLYKDIYQNN"
     gene            complement(38872..40044)
                     /gene="cgtA"
                     /locus_tag="JN001_000199"
     CDS             complement(38872..40044)
                     /gene="cgtA"
                     /locus_tag="JN001_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Obg family GTPase CgtA"
                     /protein_id="HAY9051545.1"
                     /translation="MKFVDEASILVVAGDGGNGCVSFRREKYIPKGGPDGGDGGDGGD
                     VWMEADENLNTLIDYRFEKSFRAERGQNGASRDCTGKRGKDVTIKVPVGTRVIDQGTG
                     ETMGDMTKHGQRLLVAKGGWHGLGNTRFKSSVNRTPRQKTNGTPGDKRELLLELMLLA
                     DVGMLGMPNAGKSTFIRAVSAAKPKVADYPFTTLVPSLGVVRMDNEKSFVVADIPGLI
                     EGAAEGAGLGIRFLKHLERCRVLLHLIDIDPIDGTDPVENARIIISELEKYSQDLAAK
                     PRWLVFNKIDLLDKAEAEEKAKAIAEALGWEDKYYLISAASGLGVKDLCWDVMTFIIE
                     NPVVQAEEAKQPEKVEFMWDDYHRQQLEEIAEEDDEDWDDDWDEDDEEGVEFIYKR"
     gene            complement(40060..41025)
                     /locus_tag="JN001_000200"
     CDS             complement(40060..41025)
                     /locus_tag="JN001_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012135318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY9051546.1"
                     /translation="MKQQAGIGILLALTTAICWGALPIAMKQVLEVMEPPTIVFYRFL
                     MASIGLGAILAVKKRLPPLRVFRKPRWLILLAVATAGLFGNFILFSSSLQYLSPTASQ
                     VIGQLSPVGMMVASVFILKEKMRSTQVVGALMLLSGLVMFFNTSLVEIFTKLTDYTWG
                     VIFGVGAATVWVSYGVAQKVLLRRLASPQILFLLYTLCTIALFPLAKPGVIAQLSHWQ
                     LACLIFCGLNTLVGYGALAEAMARWQAAQVSAIITLTPLFTLFFSDLLSLAWPDFFAR
                     PMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHTTVVSQPRAGE"
     gene            complement(41152..41409)
                     /gene="rpmA"
                     /locus_tag="JN001_000201"
     CDS             complement(41152..41409)
                     /gene="rpmA"
                     /locus_tag="JN001_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HAY9051547.1"
                     /translation="MAHKKAGGSTRNGRDSEAKRLGVKRFGGESVLAGSIIVRQRGTK
                     FHAGANVGCGRDHTLFAKADGKVKFEVKGPKNRKFISIEAE"
     gene            complement(41430..41741)
                     /gene="rplU"
                     /locus_tag="JN001_000202"
     CDS             complement(41430..41741)
                     /gene="rplU"
                     /locus_tag="JN001_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015960603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HAY9051548.1"
                     /translation="MYAVFQSGGKQHRVSEGQTVRLEKLDIATGETVEFAEVLMIANG
                     EEVKIGVPFVDGGVIKAEVVAHGRGEKVKIVKFRRRKHYRKQQGHRQWFTDVKITGIS
                     A"
     gene            42000..42971
                     /gene="ispB"
                     /locus_tag="JN001_000203"
     CDS             42000..42971
                     /gene="ispB"
                     /locus_tag="JN001_000203"
                     /EC_number="2.5.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="octaprenyl diphosphate synthase"
                     /protein_id="HAY9051549.1"
                     /translation="MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGG
                     KRIRPMIAVLAARAVGYEGNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAA
                     FGNAASVLVGDFIYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITE
                     ENYMRVIYSKTARLFEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNA
                     DGEQLGKNVGDDLNEGKPTLPLLHAMHHGTPEQAQMIRTAIEQGNGRHLLEPVLEAMN
                     ACGSLEWTRQRAEEEADKAIAALQVLPDTPWREALIGLAHIAVQRDR"
     gene            43199..43477
                     /gene="sfsB"
                     /locus_tag="JN001_000204"
     CDS             43199..43477
                     /gene="sfsB"
                     /locus_tag="JN001_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator SfsB"
                     /protein_id="HAY9051550.1"
                     /translation="MESNFIDWHPPDIIAGLRKKGTSMAAESRRNGLSSSTLANALSR
                     PWPKGEMIIAKALGTDPWVIWPSRYHDPQTHEFIDRTQLMRSYTKPKK"
     gene            complement(43525..44784)
                     /gene="murA"
                     /locus_tag="JN001_000205"
     CDS             complement(43525..44784)
                     /gene="murA"
                     /locus_tag="JN001_000205"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HAY9051551.1"
                     /translation="MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNV
                     PKLKDVDTSMKLLSQLGAKVERNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVA
                     RFGQGQVSLPGGCTIGARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDK
                     VSVGATVTIMCAATLAEGTTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGV
                     ERLGGGVYRVLPDRIETGTFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVG
                     EDWISLDMHGKRPKAVNVRTAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMH
                     VPELSRMGAHAEIESNTVICHGVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRI
                     YHIDRGYERIEDKLRALGANIKRVKGE"
     gene            complement(44839..45093)
                     /gene="ibaG"
                     /locus_tag="JN001_000206"
     CDS             complement(44839..45093)
                     /gene="ibaG"
                     /locus_tag="JN001_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015585657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family iron metabolism protein IbaG"
                     /protein_id="HAY9051552.1"
                     /translation="MENNEIQSVLMNALSLQEVHVSGDGSHFQVIAVGELFDGMSRVK
                     KQQTVYGPLMEYIADNRIHAVSIKAYTPAEWARDRKLNGF"
     gene            complement(45253..45546)
                     /gene="mlaB"
                     /locus_tag="JN001_000207"
     CDS             complement(45253..45546)
                     /gene="mlaB"
                     /locus_tag="JN001_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312097.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance protein MlaB"
                     /protein_id="HAY9051553.1"
                     /translation="MSESLSWMQTGDTLALSGELDQDVLLPLWEMREEAVKGITCIDL
                     SRVSRVDTGGLALLLQLIDLAKKQGNNVTLQGVNDKVYTLAKLYNLPADVLPR"
     gene            complement(45546..46181)
                     /gene="mlaC"
                     /locus_tag="JN001_000208"
     CDS             complement(45546..46181)
                     /gene="mlaC"
                     /locus_tag="JN001_000208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding protein MlaC"
                     /protein_id="HAY9051554.1"
                     /translation="MFKRLMMVALLVIAPLSAATAADQTNPYKLMDEAAQKTFDRLKN
                     EQPQIRANPDYLRTIVDQELLPYVQVKYAGALVLGQYYKSATPAQREAYFAAFREYLK
                     QAYGQALAMYHGQTYQIAPEQPLGDKTIVPIRVTIIDPNGRPPVRLDFQWRKNSQTGN
                     WQAYDMIAEGVSMITTKQNEWGTLLRTKGIDGLTAQLKSISQQKITLEEKK"
     gene            complement(46200..46751)
                     /gene="mlaD"
                     /locus_tag="JN001_000209"
     CDS             complement(46200..46751)
                     /gene="mlaD"
                     /locus_tag="JN001_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipid asymmetry maintenance
                     protein MlaD"
                     /protein_id="HAY9051555.1"
                     /translation="MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYA
                     TFDNIGGLKARSPVSIGGVVVGRVADITLDPKTYLPRVTLEIEQRYNHIPDTSSLSIR
                     TSGLLGEQYLALNVGFEDPELGTAILKDGDTIQDTKSAMVLEDLIGQFLYGSKGDDNK
                     NSGDAPAAAPGNNETTEPVGTTK"
     gene            complement(46756..47538)
                     /gene="mlaE"
                     /locus_tag="JN001_000210"
     CDS             complement(46756..47538)
                     /gene="mlaE"
                     /locus_tag="JN001_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014071945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid asymmetry maintenance ABC transporter
                     permease subunit MlaE"
                     /protein_id="HAY9051556.1"
                     /translation="MLLNALASLGHKGIKTLRTFGRAGLMLFNALVGKPEFRKHAPLL
                     VRQLYNVGVLSMLIIVVSGVFIGMVLGLQGYLVLTTYSAETSLGMLVALSLLRELGPV
                     VAALLFAGRAGSALTAEIGLMRATEQLSSMEMMAVDPLRRVISPRFWAGVISLPLLTV
                     IFVAVGIWGGSLVGVSWKGIDSGFFWSAMQNAVDWRMDLVNCLIKSVVFAITVTWISL
                     FNGYDAIPTSAGISRATTRTVVHSSLAVLGLDFVLTALMFGN"
     gene            complement(47546..48355)
                     /gene="mlaF"
                     /locus_tag="JN001_000211"
     CDS             complement(47546..48355)
                     /gene="mlaF"
                     /locus_tag="JN001_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid ABC transporter ATP-binding protein
                     MlaF"
                     /protein_id="HAY9051557.1"
                     /translation="MEQSVANLVDMRDVSFTRGNRCIFDNISLTVPRGKITAIMGPSG
                     IGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALFTDMNV
                     FDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMPSELSGGMARRAALARAIA
                     LEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAWIL
                     ADKKIVAHGSAQALQANPDPRVRQFLDGIADGPVPFRYPAGDYHADLLPGS"
     gene            48565..49542
                     /locus_tag="JN001_000212"
     CDS             48565..49542
                     /locus_tag="JN001_000212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/sodium antiporter"
                     /protein_id="HAY9051558.1"
                     /translation="MLLATALLIVGLLLVVYSADRLVFAASILCRTFGIPPLIIGMTV
                     VSIGTSLPEIIVSLAASLHEQRDLAVGTALGSNIINILLILGLAALVRPFTVHSDVLR
                     RELPLMLLVSVVAGSVLYDGQLSRSDGIFLLFLAVLWLLFIVKLARQAERQGTDSLTR
                     EQLAELPRDGGLPVAFLWLGIALIIMPVATRMVVDNATVLANYFAISELTMGLTAIAI
                     GTSLPELATAIAGVRKGENDIAVGNIIGANIFNIVIVLGLPALITPGEIDPLAYSRDY
                     SVMLLVSIIFALLCWRRSPQPGRGVGVLLTGGFIVWLAMLYWLSPILVE"
     gene            49556..50542
                     /gene="kdsD"
                     /locus_tag="JN001_000213"
     CDS             49556..50542
                     /gene="kdsD"
                     /locus_tag="JN001_000213"
                     /EC_number="5.3.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose-5-phosphate isomerase KdsD"
                     /protein_id="HAY9051559.1"
                     /translation="MSHVELQPGFDFQQAGKEVLAIERECLAELDQYINQNFTLACEK
                     MFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIA
                     ISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPLGLAP
                     TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVNDIMHTGDEIPH
                     VKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVDVRQLSIADV
                     MTPGGIRVRPGILAVEALNLMQSRHITSVMVADGDHLLGVLHMHDLLRAGVV"
     gene            50563..51129
                     /gene="kdsC"
                     /locus_tag="JN001_000214"
     CDS             50563..51129
                     /gene="kdsC"
                     /locus_tag="JN001_000214"
                     /EC_number="3.1.3.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate-8-phosphatase KdsC"
                     /protein_id="HAY9051560.1"
                     /translation="MSKAGASLATCYGPVSADVIAKAENIRLLILDVDGVLSDGLIYM
                     GNNGEELKAFNVRDGYGIRCALTSDIEVAIITGRKAKLVEDRCATLGITHLYQGQSNK
                     LIAFSELLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIA
                     GGRGAVREVCDLLLLAQGKLDEAKGQSI"
     gene            51126..51701
                     /gene="lptC"
                     /locus_tag="JN001_000215"
     CDS             51126..51701
                     /gene="lptC"
                     /locus_tag="JN001_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HAY9051561.1"
                     /translation="MSKARRWVTIVLSLAVLVMIGINMAEKDDTAQVVVNNNDPTYKS
                     EHTDTLVYNPEGALSYRLIAQHVEYYSDQAVSWFTQPVLTTFDKDKIPTWSVKADKAK
                     LTNDRMLYLYGHVEVNALVPDSQLRRITTDNAQINLVTQDVTSEDLVTLYGTTFNSSG
                     LKMRGNLRSKNAELIEKVRTSYEIQNKQTQP"
     gene            51670..52227
                     /gene="lptA"
                     /locus_tag="JN001_000216"
     CDS             51670..52227
                     /gene="lptA"
                     /locus_tag="JN001_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide ABC transporter
                     substrate-binding protein LptA"
                     /protein_id="HAY9051562.1"
                     /translation="MKFKTNKLSLNLVLASSLLAASIPAFAVTGDTDQPIHIESDQQS
                     LDMQGNVVTFTGNVIVTQGTIKINADKVVVTRPGGEQGKEVIDGYGKPATFYQMQDNG
                     KPVEGHASQMHYELAKDFVVLTGNAYLQQVDSNIKGDKITYLVKEQKMQAFSDKGKRV
                     TTVLVPSQLQDKNNKGQTPAQKKGN"
     gene            52234..52959
                     /gene="lptB"
                     /locus_tag="JN001_000217"
     CDS             52234..52959
                     /gene="lptB"
                     /locus_tag="JN001_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004091254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HAY9051563.1"
                     /translation="MATLTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTT
                     TFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAV
                     LQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFIL
                     LDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAH
                     GTPTEILQDEHVKRVYLGEDFRL"
     gene            53007..54440
                     /gene="rpoN"
                     /locus_tag="JN001_000218"
     CDS             53007..54440
                     /gene="rpoN"
                     /locus_tag="JN001_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HAY9051564.1"
                     /translation="MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESN
                     PLLEQIDTHEEIDTSETQDSETLDTADALEQKEMPEELPLDASWDTIYTAGTPSGTSG
                     DYIDDELPVYQGETTQTLQDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVPLED
                     ILESMGDEEIDIDEVEAVLKRIQRFDPVGVAAKDLRDCLLIQLSQFDKTTPWLEEARL
                     IISDHLDLLANHDFRTLMRVTRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDV
                     LVRKHNGHWTVELNSDSIPRLQINQHYASMCNNARNDGDSQFIRSNLQDAKWLIKSLE
                     SRNDTLLRVSRCIVEQQQAFFEQGEEYMKPMVLADIAQAVEMHESTISRVTTQKYLHS
                     PRGIFELKYFFSSHVNTEGGGEASSTAIRALVKKLIAAENPAKPLSDSKLTSLLSEQG
                     IMVARRTVAKYRESLSIPPSNQRKQLV"
     gene            54463..54750
                     /gene="hpf"
                     /locus_tag="JN001_000219"
     CDS             54463..54750
                     /gene="hpf"
                     /locus_tag="JN001_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007369896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome hibernation promoting factor"
                     /protein_id="HAY9051565.1"
                     /translation="MQLNITGNNVEITEALREFVRAKFAKLEQYFDRINQVYVVLKVE
                     KVTHTSDATLHVNGGEIHASAEGQDMYAAIDGLIDKLARQLTKHKDKLKQH"
     gene            54868..55359
                     /gene="ptsN"
                     /locus_tag="JN001_000220"
     CDS             54868..55359
                     /gene="ptsN"
                     /locus_tag="JN001_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HAY9051566.1"
                     /translation="MTNNDTTLQLSSVLNRECTRSRVHCQSKKRALEIISELAAKQLS
                     LPPQVVFEAILTREKMGSTGIGNGIAIPHGKLEEDTLRAVGVFVQLETPIAFDAIDNQ
                     PVDLLFALLVPADQTKTHLHTLSLVAKRLADKTICRRLRAAQSDEELYQIITDTEGTP
                     DEA"
     gene            55405..56259
                     /gene="rapZ"
                     /locus_tag="JN001_000221"
     CDS             55405..56259
                     /gene="rapZ"
                     /locus_tag="JN001_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HAY9051567.1"
                     /translation="MVLMIVSGRSGSGKSVALRALEDMGFYCVDNLPVVLLPDLARTL
                     ADREISAAVSIDVRNMPESPEIFEQAMSNLPDAFSPQLLFLDADRNTLIRRYSDTRRL
                     HPLSSKNLSLESAIDKESDLLEPLRSRADLIVDTSEMSVHELAEMLRTRLLGKREREL
                     TMVFESFGFKHGIPIDADYVFDVRFLPNPHWDPKLRPMTGLDKPVAAFLDRHTEVHNF
                     IYQTRSYLELWLPMLETNNRSYLTVAIGCTGGKHRSVYIAEQLADYFRSRGKNVQSRH
                     RTLEKRKP"
     gene            56256..56528
                     /gene="npr"
                     /locus_tag="JN001_000222"
     CDS             56256..56528
                     /gene="npr"
                     /locus_tag="JN001_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS phosphocarrier protein NPr"
                     /protein_id="HAY9051568.1"
                     /translation="MTVKQTVEITNKLGMHARPAMKLFELMQGFDAEVLLRNDEGTEA
                     EANSVIALLMLDSAKGRQIEVEATGPQEEEALAAVIALFNSGFDED"
     gene            56742..57374
                     /gene="yrbL"
                     /locus_tag="JN001_000223"
     CDS             56742..57374
                     /gene="yrbL"
                     /locus_tag="JN001_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP regulatory network protein YrbL"
                     /protein_id="HAY9051569.1"
                     /translation="MIRLSEQSPLGTGRHRKCYAHPEDAQRCIKIVYHRGDGGDKEIR
                     RELKYYAYLGRRLKDWSGIPRYHGTVETDCGTGYVYDVIADFDGKPSITLTEFAEQCR
                     YEEDIAQLRQLLKQLKRYLQDNRIVTMSLKPQNILCHHISESEVIPVVCDNIGESTLI
                     PLATWSKWCCLRKQERLWKRFIAQPALAIALQKDLQPRESKTLALTSREA"
     gene            complement(57371..58099)
                     /gene="mtgA"
                     /locus_tag="JN001_000224"
     CDS             complement(57371..58099)
                     /gene="mtgA"
                     /locus_tag="JN001_000224"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HAY9051570.1"
                     /translation="MSKSRLTVFSFVRRFLLRLMVVLAVFWGGGIALFSVAPVPFSAV
                     MVERQVSAWLHGNFRYVAHSDWVSMDQISPWMGLAVIAAEDQKFPEHRGFDVASIEKA
                     LAHNERNENRIRGASTISQQTAKNLFLWDGRSWVRKGLEAGLTLGIETVWSKKRILTV
                     YLNIAEFGDGVFGVEAAAQRYFHKPASKLTRSEAALLAAVLPNPLRFKVSSPSGYVRS
                     RQAWILRQMYQLGGEPFMQQHQLD"
     gene            complement(58096..58749)
                     /gene="elbB"
                     /locus_tag="JN001_000225"
     CDS             complement(58096..58749)
                     /gene="elbB"
                     /locus_tag="JN001_000225"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709007.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenoid biosynthesis glyoxalase ElbB"
                     /protein_id="HAY9051571.1"
                     /translation="MKKIGVILSGCGVYDGSEIHEAVLTLLAISRSGAQAVCFAPDKQ
                     QVDVINHLTGEAMTETRNVLIEAARITRGEIRPLAQADAAELDALIVPGGFGAAKNLS
                     NFATLGSECTVDRELKALAQAMHQAGKPLGFMCIAPAMLPKIFDFPLRLTIGTDIDTA
                     EVLEEMGAEHVPCPVDDIVVDEDNKIVTTPAYMLAQNIAEAASGIDKLVSRVLVLAE"
     gene            complement(58979..61315)
                     /gene="arcB"
                     /locus_tag="JN001_000226"
     CDS             complement(58979..61315)
                     /gene="arcB"
                     /locus_tag="JN001_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic respiration two-component sensor
                     histidine kinase ArcB"
                     /protein_id="HAY9051572.1"
                     /translation="MKQIRLLAQYYVDLMMKLGLVRFSMLLALALVVLAIVVQMAVTM
                     VLHGQVESIDVIRSIFFGLLITPWAVYFLSVVVEQLEESRQRLSRLVQKLEEMRERDL
                     SLNVQLKDNIAQLNQEIAVREKAEAELQETFGQLKIEIKEREETQIQLEQQSSFLRSF
                     LDASPDLVFYRNEDKEFSGCNRAMELLTGKSEKQLVHLKPADVYSPEAAAKVIETDEK
                     VFRHNVSLTYEQWLDYPDGRKACFEIRKVPYYDRVGKRHGLMGFGRDITERKRYQDAL
                     ERASRDKTTFISTISHELRTPLNGIVGLSRILLDTELTAEQEKYLKTIHVSAVTLGNI
                     FNDIIDMDKMERRKVQLDNQPVDFTSFLADLENLSALQAQQKGLRFNLEPTLPLPHQV
                     ITDGTRLRQILWNLISNAVKFTQQGQVTVRVRYDEGDMLHFEVEDSGIGIPQDELDKI
                     FAMYYQVKDSHGGKPATGTGIGLAVSRRLAKNMGGDITVTSEQGKGSTFTLTIHAPSV
                     AEEVDDAFDEDDMPLPALNVLLVEDIELNVIVARSVLEKLGNSVDVAMTGKAALEMFK
                     PGEYDLVLLDIQLPDMTGLDISRELTKRYPREDLPPLVALTANVLKDKQEYLNAGMDD
                     VLSKPLSVPALTAMIKKFWDTQDDEESTVTTEENSKSEALLDIPMLEQYLELVGPKLI
                     TDGLAVFEKMMPGYVSVLESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS
                     PDLPAWEDNVGEWIEEMKEEWRHDVEVLKAWVAKATKK"
     gene            complement(61411..62340)
                     /locus_tag="JN001_000227"
     CDS             complement(61411..62340)
                     /locus_tag="JN001_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312117.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HAY9051573.1"
                     /translation="MQLQKLVNMFGGDLTRRYGQKVHKLTLHGGFSCPNRDGTIGRGG
                     CTFCNVASFADEAQQHRSIAEQLAHQANLVNRAKRYLAYFQAYTSTFAEVQVLRSMYQ
                     QAVSQANIVGLCVGTRPDCVPDAVLDLLCEYKDQGYEVWLELGLQTAHDKTLHRINRG
                     HDFACYQRTTQLARQRGLKVCSHLIVGLPGEGQAECLQTLERVVETGVDGIKLHPLHI
                     VKGSIMAKAWEAGRLNGIELEDYTLTAGEMIRHTPPEVIYHRISASARRPTLLAPLWC
                     ENRWTGMVELDRYLNEHGVQGSALGRPWLPPTE"
     gene            63015..67475
                     /gene="gltB"
                     /locus_tag="JN001_000228"
     CDS             63015..67475
                     /gene="gltB"
                     /locus_tag="JN001_000228"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HAY9051574.1"
                     /translation="MLYDKSLERDNCGFGLIAHIEGEPSHKVVRTAIHALARMQHRGA
                     ILADGKTGDGCGLLLQKPDRFFRIVAQERGWRLAKNYAVGMLFLNKDPELAAAARRIV
                     EEELQRETLSIVGWRDVPTNEGVLGEIALSSLPRIEQIFVNAPAGWRPRDMERRLFIA
                     RRRIEKRLEADKDFYVCSLSNLVNIYKGLCMPADLPRFYLDLADLRLESAICLFHQRF
                     STNTVPRWPLAQPFRYLAHNGEINTITGNRQWARARTYKFQTPLIPDLHDAAPFVNET
                     GSDSSSMDNMLELLLAGGMDIIRAMRLLVPPAWQNNPDMDPELRAFFDFNSMHMEPWD
                     GPAGIVMSDGRFAACNLDRNGLRPARYVITKDKLITCASEVGIWDYQPDEVVEKGRVG
                     PGELMVIDTRSGRILHSAETDDDLKSRHPYKEWMEKNVRRLVPFEDLPDEEVGSRELD
                     DDTLASYQKQFNYSAEELDSVIRVLGENGQEAVGSMGDDTPFAVLSSQPRIIYDYFRQ
                     QFAQVTNPPIDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSFKSPILLYSDFKQLT
                     TMKEEHYRADTLDITFDVTKTTLEATVKELCDKAEKMVRSGTVLLVLSDRNIAKDRLP
                     VPAPMAVGAIQTRLVDQSLRCDANIIVETASARDPHHFAVLLGFGATAIYPYLAYETL
                     GRLVDTHAIAKDYRTVMLNYRNGINKGLYKIMSKMGISTIASYRCSKLFEAVGLHDDV
                     VGLCFQGAVSRIGGASFEDFQQDLLNLSKRAWLARKPISQGGLLKYVHGGEYHAYNPD
                     VVRTLQQAVQSGEYSDYQEYAKLVNERPATTLRDLLAITPGENAVNIADVEPASELFK
                     RFDTAAMSIGALSPEAHEALAEAMNSIGGNSNSGEGGEDPARYGTNKVSRIKQVASGR
                     FGVTPAYLVNADVIQIKVAQGAKPGEGGQLPGDKVTPYIAKLRYSVPGVTLISPPPHH
                     DIYSIEDLAQLIFDLKQVNPKAMISVKLVSEPGVGTIATGVAKAYADLITIAGYDGGT
                     GASPLSSVKYAGCPWELGLVETQQALVANGLRHKIRLQVDGGLKTGVDIIKAAILGAE
                     SFGFGTGPMVALGCKYLRICHLNNCATGVATQDDKLRKNHYHGLPFKVTNYFEFIARE
                     TRELMAQLGVTRLVDLIGRTDLLKELDGFTAKQQKLALSKLLETAEPHPGKALYCTEN
                     NPPFDNGLLNAQLLQQAKPFVDERQSKTFWFDIRNTDRSVGASLSGYIAQTHGDQGLA
                     ADPIKAYFNGTAGQSFGVWNAGGVELYLTGDANDYVGKGMAGGLIAIRPPVGSAFRSH
                     EASIIGNTCLYGATGGRLYAAGRAGERFGVRNSGAITVVEGIGDNGCEYMTGGIVCIL
                     GKTGVNFGAGMTGGFAYVLDESGDFRKRVNPELVEVLNVDDLAIHEEHLRGLITEHVQ
                     HTGSQRGEEILANWSTFATKFALVKPKSSDVKALLGHRSRSAAELRVQAQ"
     gene            67488..68906
                     /locus_tag="JN001_000229"
     CDS             67488..68906
                     /locus_tag="JN001_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY9051575.1"
                     /translation="MSQNVYQFIDLQRVDPPKKPLKIRKIEFVEIYEQFSEGQAKAQA
                     DRCLSCGNPYCEWKCPVHNYIPNWLKLANEGRIFEAAELSHQTNTLPEVCGRVCPQDR
                     LCEGSCTLNDEFGAVTIGNIERYINDKAFEMGWRPDMSGVKQTGKKVAIIGAGPAGLA
                     CADVLTRNGVKAVVFDRHPEIGGLLTFGIPAFKLEKEVMTRRREIFTGMGIEFKLNTE
                     VGRDVQLDDLLSDYDAVFLGVGTYQSMRGGLENKDADGVYAALPFLIANTKQLMGFGE
                     TRDEPFVSMEGKRVVVLGGGDTAMDCVRTSVRQGAKHVTCAYRRDEENMPGSRREVKN
                     AREEGVEFKFNVQPLGIEVNGNGKVSGVKMVRTEMGEPDAKGRRRAEIVAGSEHIVPA
                     DAVIMAFGFRPHNMEWLAKHSVELDSQGRIIAPEGSDNAFQTSNPKIFAGGDIVRGSD
                     LVVTAIAEGRKAADGIMNWLEV"
     gene            69090..69569
                     /locus_tag="JN001_000230"
     CDS             69090..69569
                     /locus_tag="JN001_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1016 family protein"
                     /protein_id="HAY9051576.1"
                     /translation="MESLSERTSTGYQQIHDGIIHLVDSARTETVRSVNALMTATYWE
                     IGRRIVEFEQGGEARAAYGAQLIKRLSKDLSLRYKRGFSAKNLRQMRLFYLFFQHVEI
                     RQTVSGELTPLGIPQTPSAEFPSAKIWQTLSAKLRGCLIFPQLLYCISYFRFVYSCK"
     gene            69586..>69857
                     /locus_tag="JN001_000231"
     CDS             69586..>69857
                     /locus_tag="JN001_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9051577.1"
                     /translation="MIYIEQLELIHKSGDVLYPVKITRKSSGKTAFHLVPFGLNKTHD
                     LLEVEDASEAIRLVIDERHSIRCSTLTATITNKKGKRIKRTGIYSI"
BASE COUNT        17099 a        18941 c        17347 g        16470 t
ORIGIN      
        1 tgacagcctg gatattaaaa ccacattaca ggcaaacgac attccaggac tcacaaccga
       61 ccaggttgtc tctgttaaca cccgattcac acagataaaa agcagcaccg tatattctgc
      121 tgcaacccaa acgggtgttt gccagggtga cacgtctcgt tatggacccg ttaatattgg
      181 tgcaaatacc acctttaccc tgtatgtcac caagccattt ctcggctcga tgaccattcc
      241 gaaaacggat attgccgtca ttaaaggcgc gtgggtcgat ggaatgggaa gcccgtctac
      301 aggtgacttc catgatttag tcaagttatc gattcaggga aatctcaccg ccccacagtc
      361 gtgcaaaatt aatcagggcg atgttattaa ggttaatttt ggattcatca atggtcagaa
      421 gtttaccacc cgcaatgcca tgccagacgg ttttactcca gtagactttg atatcactta
      481 tgactgtggt gatacttcaa agattaaaaa ctcgttgcaa atgcgcatcg acggtacaac
      541 tggggtagta gaccagtaca acctggtcgc caggcgaaga agttcagaca atgtgcccga
      601 tgtcggtatt cgtattgaaa atctcggcgg cggagttgca aatattcctt ttcagaacgg
      661 tatccttccc gttgatcctt ccgggcatgg caccgtcaat atgcgcgcct ggccagttaa
      721 tctggtcggt ggtgagctgg aaacaggaaa atttcagggc acagccacca ttaccgtcat
      781 ggtgcggtaa aagaagacgt tgcgttttga ttaacgcaac gcttcggcac tgttacccct
      841 gctgctccag cgcatactta tacagcgcat ttttcttcac gccatgaatt tctgcgacca
      901 gcgccgccgc ttttttcagc ggcagttctg cctgtagcag cgccagcgtg cgcagggcat
      961 cggcgggtaa gtcttcttcc tgtgctttat gaccttcgac aatcagcacc atttcgcctt
     1021 tgcgacggtt ttcatcttcc tttacccacg ccagcagttc gccaacgggc gcgccgtgaa
     1081 tggtttccca ggttttggtc agctcacgcg ccagaaccac gtagcgggat tcgcctaata
     1141 ccgcaacgat atcttccagg ctatctaaca gacggtgggt ggattcataa aaaatcagcg
     1201 tgcgcggctc cgcttcaatg gcttttagcg catcacggcg gccttttgat ttggcaggta
     1261 aaaagccttc gtaacagaaa cggtcagagg gtaaacccgc ggcgcttaac gcagtgatag
     1321 cagcacacgg cccgggtagc ggcaccacgc gaatccccgc ttcacggcag gtacgcacca
     1381 gatggtagcc aggatcgtta attagcggcg ttccggcatc ggaaaccagc gcaatgtttt
     1441 gcccctcttg cagcttcgcc agcagcgttt cggctttttg ttgttcgtta tggtcgtgca
     1501 gcgcaaacaa ccgggcatta atcccaaaat gttgcagcaa taaaccggtg tgacgagtat
     1561 cctcggcggc aatcagatca acggcctgta atacctctaa cgcacgctgg gtgatatccg
     1621 ccagattgcc gattggcgtc ggtacaatgt aaagctggcc ctgagaatta tccgccgatt
     1681 ggtgttgttt cattgtgtcg tccgtattgc cgatttaata ttgagcattg cgtaaaaaaa
     1741 tatcactgga tacattatgg taccctcaac attttctcgt ttgaaagccg cgcgttgtct
     1801 gcctgttgtt ctggcagccc tgattttcgc cggttgtggc acccatactc ccgatcagtc
     1861 cactgcttat atgcagggca cggcgcaggc tgattctgcc ttttatcttc agcagatgca
     1921 gcaaagctct gatgatacca ggatcaactg gcaattactc gccattcgtg cactggtgaa
     1981 agaaggtaaa accgggcagg cggttgagtt gtttaaccaa ctaccgcaag aactgaacga
     2041 ttctcagcgt cgcgagaaaa cactgctggc ggtagagatt aaactggcgc agaaagattt
     2101 tgctggcgcg caaaacttgc tggcgaaaat cacacctgcc gatttagaac aaaaccagca
     2161 agcgcgttac tggcaggcaa aaatcgatgc cagccagggg cgtccttcca ttgatttact
     2221 gcgcgcgtta attgctcagg aaccgctgct cggcgcgaaa gaaaaaaagc agaatattga
     2281 tgccacctgg caggcgctct cctccatgac tcaggaacag gcgaatacgc tggtgatcaa
     2341 cgccgacgaa aatattctgc aaggctggct ggatctgcag cgcgtctggt ttgataaccg
     2401 taacgatccc gatatgatga aagccgggat cgccgactgg cagaaacgtt atccgaacaa
     2461 tccgggcgcg aaaatgctgc caacgcagtt ggttaacgta aaagcgttta aaccagcctc
     2521 gaccaacaaa atcgccctgc tgttgccgct gaatggccag gcagcggtat ttggtcgcac
     2581 tattcagcaa ggctttgaag cggcgaaaaa tatcggcact cagccagtgg cggctcaggt
     2641 agctgccgca gacgtagcag aacaacctca gccgcaaact gcggatggcg ttgccagccc
     2701 ggcacaagcc tcggttagcg atctgaccgg tgatcagcct gcggcccagc cggtgcctgt
     2761 aagcgccccg gcgacaagca ccgcagcggt aagcgcaccc gcaaatccat ccgcagagct
     2821 gaaaatctac gatacctcat cacaaccact tagccagatc ttaagccagg ttcagcagga
     2881 tggcgcgagt attgtggttg gtccgttgct gaaaaataac gttgaagagt tgcttaagag
     2941 caacaccccg ctgaacgtgc tggtactgaa ccagccggag aatatcgaaa accgcgtcaa
     3001 tatttgttac ttcgcgcttt caccggaaga cgaagcgcgc gatgcagcgc gtcatattcg
     3061 tgaccagggt aaacaagcgc cgctggtgct gatcccacgc agttcattgg gcgatcgcgt
     3121 agccaatgcg tttgcgcagg agtggcagaa actgggcggc ggcaccgttc tgcaacaaaa
     3181 atttggttcc accagcgaat tacgcgcggg tgttaacggc ggttctggta tcgctttaac
     3241 gggtaccccg attactccca gagcgacaac cgactccggc atgacgacca acaatccaac
     3301 gctgcaaacc acgccaaccg atgaccagtt caccaataat ggcggtcgtg tcgatgcggt
     3361 gtacattgtg gcaacgccgg gtgaaatcgc ttttatcaaa ccgatgatcg ccatgcgtaa
     3421 cggtagccag agcggtgcaa tgctgtacgc cagctcccgc agcgcacaag gcaccgcagg
     3481 cccggatttc cgtctggaga tggaaggttt gcagtacagc gaaatcccga tgctggcggg
     3541 cggtaatctg ccgttaatgc agcaggcact cagcgcggtg aataacgatt attcactggc
     3601 tcgcatgtat gcgatgggcg tcgatgcctg gtcgctggca aatcatttct cacaaatgcg
     3661 ccaggttcag ggttttgaaa tcaacggtaa taccggaagc ctgacggcaa acccggattg
     3721 cgtgattaac aggaagttat catggctaca gtaccaacaa ggtcaggtag tccccgccag
     3781 ttaaccacca aacagaccgg cgatgcgtgg gaagtacaag cgcgtcgctg gctggaaggc
     3841 aaaggactgc gatttgtcgc cgctaacgtg aacgagcgtg gcggtgagat cgatctgata
     3901 atgcgtgaag gctggaccac cgtttttgtc gaggtgcgtt accgccgctc tgcgctttat
     3961 ggcggcgcgg cagccagtgt gacccgcagc aaacaacaca aattattaca gactgcccgc
     4021 ttgtggctcg cgcgtcataa tgggagtttt gatactgtgg attgccggtt cgatgtggta
     4081 gccttcaccg ggaatgaggt tgagtggatt aaggatgcct ttaatgacca ctcataatta
     4141 aggtttaagg attagcgtgc aagaaagaat taaagcttgc ttcactgaaa gcattcaaac
     4201 tcaaattgcg gcggcagagg cgcttccgga tgccatctcc cgtgcagcca tgacgctggt
     4261 tcagtctctg ctcaatggca acaaaatcct ctgttgtggt aatggaactt ccgctgccaa
     4321 tgcacagcat tttgctgcca gcatgatcaa ccgtttcgaa acggagcggc ccagcttacc
     4381 tgccattgca ctaaatactg ataatgttgt cttaacggcg attgccaacg atcgcttaca
     4441 tgatgaagtg tatgcaaaac aggtgcgggc gctgggtcat gcgggagatg tattgttagc
     4501 catttccacc cgtggcaaca gccgcgatat tgttaaagca gttgaagccg ccgttacgcg
     4561 tgatatgacc attgtggcat tgaccggcta tgacggcggc gaacttgcag gtttgttagg
     4621 gccacaggat gtggagatcc gcattccttc gcatcgtagt gctcgcattc aggaaatgca
     4681 tatgctgacg gtaaattgcc tgtgcgatct gatcgataac acgcttttcc ctcaccagga
     4741 tgattaagga gaatacatga aggcattatc gccaatcgca gtccttattt ccgcgctgct
     4801 gttgcaaggt tgtgttgccg ctgccgtagt gggtaccgct gctgtgggta ccaaagccgc
     4861 aactgaccca cgcagtgtcg gtacccaggt ggacgatggt accctggaag tgcgcgtgaa
     4921 cagcgcattg tcgaaagacg aacagattaa gaaagaaacc cgtattaatg tcacggcgta
     4981 tcagggcaaa gtgctgctgg ttgggcagtc accaaatgct gaactttcgg ctcgcgccaa
     5041 acagattgct atgggcgtag acggtgccaa cgaagtgtat aacgagattc gtcagggcca
     5101 gccgattggt ctgggcgaag catctaacga tacgtggatc accaccaaag tgcgttcgca
     5161 gctcttaacc agcgacctgg tgaaatcgtc caacgtgaaa gtgaccaccg aaaacggtga
     5221 agtgttcctg atggggctgg tgactgaacg tgaagcgaaa gcggcggcag atattgccag
     5281 ccgggtgagc ggcgtaaagc gggtaaccac agcgtttacg tttattaaat agcagcccct
     5341 tgtaatgcct gatgcgacgc ttgccgcgtc ttatcaggcc tacaacgatg caaaccgtag
     5401 gtcggataag gcgtttacgc cgcatccgac atgttttccc tcaaatcaga acaacagcgc
     5461 cagcccgccg acaatcacac cagacactgc caccatcgcc cctgtcagcc ataaggcttt
     5521 cgccgggaac gctttgcgca gcataatcag tgacggcaaa ctcactgccg ggagcgtcat
     5581 caacaatgcc agcgccggag cggttcccat acctgccagc atcatcgttt gtacaatcgg
     5641 aatttctgct gccgtgggaa tgacaaacaa gcatcctgct accgccatcg ccaccaccca
     5701 catcaggctg ttatcgacag caccatcggc atgggggaat aaccagacgc gtgcggcacc
     5761 caacaccagt actgcaagga tgtaaaccgg gatcgtactc cagaaaagtg tccatagcgc
     5821 cctgccccag cggctaaaaa aaccgctccg tgcttccggt atgtcaattt cgaccggtgc
     5881 ctgcgtttgc ggtgtttcac gcacccattt ttgcaccagc gtcgcaatca gcaacaccat
     5941 caccagcccg gccaccagac aaatcgccgc aaaaccccag ccgaggacaa accccataaa
     6001 caccagcgtc gccgggttta acaccggatt gcccatccag aatgccagcg caccgcccat
     6061 cgatacctgt tggcgacgca tccccgccgc gaccggagcc gcacagcagg tacacatcat
     6121 gcccggcagc gaaaacagcg ttcccagcag cgtgccgcga aagcgcgatt gcccaagcgt
     6181 acgcaacaac cagtcacgcg ggatcagcac ctgaatcaac gaaccgagga tcacccccag
     6241 caccgccgct ttccatactg cgaggaaata gatcatcgcg taatccaacg ccgcttgcca
     6301 cggattagca tccgcctgcg caaggataga tttaccgata ctgtgggttt cggctgcagt
     6361 aaacgctttg ccgtagtaat gttgccattt cacataccag agaccggcaa tgacaacgag
     6421 aaagaaaagc gcgggtttcc accactgaat gggtgttgcc gcctgagatg aagactgacc
     6481 agtcatagca ttccctagga ataagttatg ataattgagc gcgtgaatat tacgctcact
     6541 atcaattctt gggaataatt attcagctct tttgcgtaat tctgaagagc ttaaaatcgt
     6601 cacgccttca tgctcaggcc gcatcgcctc tgccagcatg acccgcgcca cgtctctcgc
     6661 atcaatggat ttccagttac ctggtaacaa acggaacagc ggcgcaaaaa gcgtttcgtt
     6721 catccgctgt ttgctacgat cgcccagtaa catcgacggg cgagcaatgg tcaatttcgg
     6781 ccagttctgg gcaattaatg cttcttccat ctcccctttg acgcggttat agaaaaacgg
     6841 cgagtgggca ttggccccca tagcactgac caccagcata tgctgcgcgc ccagccgccg
     6901 cccggttaat gcggtatcca ctaccagcgt gtaatcggca tgaataaacg cctctttgct
     6961 ccccgcttct cgccgcgtgg tgccgagaca acaaaacaca atgtcgatgg gttcggtgac
     7021 ctgcgccaac gcgtcactca gttgcggatc atggggatta aacaccccgg gcatatcgcc
     7081 caacggacgt cgcgtcggcg cagcaatggc gttaactttc ggttcattaa tcaacatccg
     7141 cagcaggtga ccgcccacca gccccgttgc gcctgtaatc agtacctgac tcatcttcgc
     7201 tcctttacag aattgtctgc cttgcgctcc acggctcatg caccagtctt aatagaccat
     7261 gaggtaatta tccccgattg tgggaaattc gcctcatcca atgcaacaac gcggaggaag
     7321 catgagtaag aaaattgccg ttttaatcag tgatgaattt gaggattcag aatttacttc
     7381 acccgcagac gagttccgta aagccggaca cgaagtaatt accattgaaa agcaagcggg
     7441 taaaacggtg aaaggcaaaa aaggagaagc cagcgtgacc atcgataaat ccatcgatga
     7501 agtgacgcca gcggagtttg atgccctgct gctaccgggc ggccattcac cggattatct
     7561 gcgtggggac aaccgttttg tcacctttac ccgtgatttt gtgaatagcg gcaaacctgt
     7621 tttcgccatc tgtcacggtc cgcagctgct gatcagcgcc gatgtgattc gggggcgcaa
     7681 actgaccgca gttaaaccga tcattattga tgttaaaaat gcgggcgcgg aattttacga
     7741 tcaggaagtc gtggttgata aagatcagct ggttaccagc cggacaccgg acgatctgcc
     7801 agcgtttaac cgcgaggcgt tacgcctgct cggtgcctga gtcgcgtagc caaatcattt
     7861 ttttaccaaa gcccagcgtg ttgtcggtga atttgatttc atcgagccgg atttcccaca
     7921 ccggggccga cagcattctg gcaaccggaa agcgatgatt gtacgccttg cgcgcgaggt
     7981 cgctttcctc accttccagc ctgcggatct cacctttaaa ctgcacaccg cgaattaacg
     8041 ctaccgtttt cggctgaccg tttaccgttc cggcaaccgc agcctgcggc ccactcatct
     8101 gcgcgtggcg cgttttttct tccgtcaaaa tgtagaaggc gactttctgc gcatcaaaca
     8161 gataaaaagc attagcgcac cacagttccc cttcctgctg cacacaccag gtgacaacat
     8221 gttgttttgc caaccaacgg ctgatggtga tgagtgtttc cattgctgtt ctcttttata
     8281 ctgtgggcct gaccttaaca tgcgacgcag acgatgacac cctggtttct ttacttgatc
     8341 cgtaccgccg acaataagct ttataccggg atcaccacgg atgtcgaacg ccgctatcag
     8401 cagcaccaaa gcggcaaagg ggcgaaagca ctgcgcggga aaggagaact gacgctggcg
     8461 ttttctgcgc cagtgggcga ccgttcgctg gcactacggg cggaatatcg cgttaagcaa
     8521 ctgaccaaac ggcaaaaaga gcgtctggta gcggaaggcg cagggtttgc agaactgttg
     8581 agcagcctgc aaaccccgga gattaaaagc gattgaaatg ctcgtgatac tcaaccagac
     8641 cggttacgcc attcagcgcg tcatccgcta aacgatgtac ctggaaggcg ctttcagtgc
     8701 ccggccagcg gcaacgcaga tcgtgatgcg ccgccagttc aaagccgaaa cgactgtaca
     8761 gcgccggatc gcccagcgtc accactgcgg catagccgaa ctcattaagc gaatcgagtc
     8821 cttcatagac cagttggcgt gccagcccct gtccacggta tttttcatca accgccaacg
     8881 gtgccatgcc gacccattgc aggtcttcgc cctgcacatc aaccggacta aatgccacat
     8941 agccaatgac ctgaccttcg tcatctgtcg ccaccagccc cagcgtcaga aagccatctt
     9001 cacgcagatc gtgaaccagc ttcgcttccg catcactttc gaatgagcga cgcagcaggg
     9061 catcaatacc cggcgcatca atgggaattt ctactcgaat tagcatggtt cacctaccga
     9121 tgtctgtttg gtttcaggcg cggttttcat tcccgcctca acaaaatccg ccagttgcag
     9181 cagcatcatg cgtaaggctt tcggcatttg ctccagttca atggcgtcca tcaggttttt
     9241 cacatgcagc cccagctccg tatcgccttc aatcaccagc cgacgctgga agaagagcgt
     9301 atctggatct tgtttacgcg ccgcaatcat cagcagatcg ctgacgtcgg cactaaaact
     9361 cacatcagct tgcgcgttct ggctgaccac cagtttgcca ttcaccaccg aggtaaacca
     9421 ttgcaggtca atatcacgca catgaatact taaccagcgg ccttcaagaa actccagctc
     9481 gccatcatcc agcgcctgac ggaattgcca gcttaagacc tgctcaagaa cctggcgttt
     9541 tagcgcaaat ggcgtcagtt ttaccggtac actcaacaga gatggcccca aatgcacaat
     9601 acgggaacga agtttatcca acacgagttt tactccctgt ttcaacaatc atcctatttt
     9661 gccatatcag aaaaataaca tagcggtata aatcaacaat tccatatgaa attgctgcta
     9721 ccaccaatac aactttaact gccttaaatc aaaaattgtc gcagcaaggt taactaaaat
     9781 cccagttcgt taacattttt gcgttttgat agcgcaacct tcaggaaaaa ttatggagct
     9841 gctctgccct gccggaaatc tcccggcgct taaggcggcc atcgaaaacg gcgcagatgc
     9901 tgtttatatc gggctaaaag atgataccaa tgcccgtcac ttcgccggcc ttaactttac
     9961 cgagaaaaaa ttgcaggaag cggtgagttt tgtccatcaa catcgccgca aacttcacat
    10021 cgcgattaac acttttgcgc atccggacgg ttacgcccgt tggcagcgcg ccgtggatat
    10081 ggcggcgcag ctgggtgccg acgcgctgat cctcgccgac ctcgccatgc tggaatacgc
    10141 cgccgagcgt tatccgaata ttgagcgcca cgtatcggtg caggcttcgg cgaccaatga
    10201 agaggcgatt aacttttatc atcgccattt tgacgttgcc cgcgtggtgc tgccgcgcgt
    10261 gttgtcgatt catcaggtga aacagctggc acgggtcaca cctgtaccac tggaagtgtt
    10321 tgctttcggc agcctgtgca ttatgtcgga aggccgttgc tatctgtcgt cgtatctgac
    10381 gggtgagtcg cctaacaccg tgggcgcgtg ttctccggcc cgtttcgtgc gctggcaaca
    10441 aacgccgcag gggctggaat cccgcctgaa cgaagtgctg atcgaccgtt atcaggacgg
    10501 cgaaaacgca ggttatccga cgctgtgtaa agggcgttat ctggtggacg gcgagcgcta
    10561 tcacgcgctg gaagaaccaa ccagtctcaa taccctggaa ctgctgccgg agttaatggc
    10621 ggcgaatatt gcttcggtga aaattgaagg ccgccagcgt agcccggcgt atgtcagcca
    10681 ggtggcgaaa gtctggcgtc aggctatcga ccgttgtaag gccgatccgc aaagcgcgtg
    10741 gatggagacg ctcgggtcga tgtccgaagg cacgcagacc acccttggcg cgtatcaccg
    10801 taaatggcag tgagaagagc aatgaaatat tccttagggc cagtgctgtg gtactggcca
    10861 aaagagacgc tggaagattt ttatcagcag gccgccacca gcagcgccga cgtgatttat
    10921 cttggtgaag cggtatgcag caagcgccgg gcaaccaaag ttggcgactg gctggagatg
    10981 gcaaaatcgc tcgccggaag tggcaagcag attgtgctct ccacgctggc gctggtgcag
    11041 gcatcctctg aactgggcga actgaaacgc tatgttgaga acggtgagtt tctgattgaa
    11101 gccagcgatc tcggcgtggt gaatatgtgc gctgaacgca aactgccgtt cgtcgccggg
    11161 cacgcgctga actgctacaa cgcggtgacg ctgaaaatat tgctcaaaca gggcatgatg
    11221 cgctggtgta tgccggtgga gctttcccgc gactggctgg tgaatctgct taatcagtgc
    11281 gatgagctgg gcattcgcaa ccagtttgaa gtggaagtcc tgagctacgg tcatctaccg
    11341 ctggcctact ccgctcgctg ctttaccgcg cgttcggaag accgcccgaa agatgagtgt
    11401 gaaacctgct gcattaagta tccgaacggg cgcaacgtgc tgtcgcagga aaaccaacaa
    11461 gtgtttgtac tcaatggcat tcagaccatg agcggctacg tttacaacct cggtaacgag
    11521 ctgacatcca tgcagggatt ggttgatgtg gtccgcctgt caccgcaggg tactgacact
    11581 ttcgcgatgc tcgacgcctt ccgcgctaat gaaaatggcg ctgcgccact attgttgacg
    11641 gcaaacagcg actgtaacgg ctactggcgg cggctggcag gactggagct gcaagcctaa
    11701 gtaaatatgc tcgtcatact tcaagttgca tgtgctgcat ctgcattcgt tcaccccagt
    11761 cacttactta tgtaagctcc tggggattca ctctcttgtc gccttcctgc aactcgaatt
    11821 atttagagca cagctcactt tgttaacaac tttaactact ctttaatgca gtattaaaga
    11881 ttaatcggta acaaagtgag ctgttatgac tgataaaacc attgcgtttt cgttactcga
    11941 tctggccccc attcccgaag gttcttcagc gcgagaagca ttctcccact ctctcgatct
    12001 cgcccgtctg gctgaaaagc gcggctatca tcgctactgg ctggcagaac accacaatat
    12061 gactggcatt gccagtgctg ccacgtcggt attgattggc tatctggcgg cgaataccac
    12121 cacgctgcat ctggggtctg gcggcgtgat gttgcctaac cactcaccgt tggtcattgc
    12181 cgaacagttc ggcacgctca atacactcta tccggggcga atcgatttgg ggctgggtcg
    12241 tgcgccaggt agtgaccaac ggacaatgat ggcgctgcgt cgccatatga gcggcgatat
    12301 tgataatttc ccccgcgatg tcgcggagct ggtggactgg tttgacgccc gcgatcccaa
    12361 tccgcatgtg cgcccggtac caggctatgg cgagaaaatc cccgtgtggt tgttaggctc
    12421 cagcctttac agcgcgcaac tggcggcgca gcttggtctg ccgttcgcgt ttgcctcaca
    12481 cttcgcgccg gatatgttgt tccaggcgct gcatctttat cgcagcaact tcaaaccgtc
    12541 ggcacgactg gaaaaaccat acgcgatggt gtgcatcaat attatcgccg ccgacagcaa
    12601 ccgcgatgcc gaattcctgt ttacctcaat gcagcaagcc tttgtgaagc tgcgccgcgg
    12661 cgaaaccggg caactgccgc caccgattca aaatatggat cagttctggt cgccgtccga
    12721 acagtatggt gtgcagcagg cgctgagtat gtcgttggta ggtgataaag cgaaagtgcg
    12781 tcatggcttg cagtcgatcc tgcgcgaaac cgacgccgat gagattatgg tcaacgggca
    12841 gattttcgac caccaggcgc ggctgcattc gtttgagctg gcgatggatg ttaaggaaga
    12901 gttgttggga tagtgtgtct taacgcggga agccttatcc gagctggcaa cgctgtccta
    12961 cgtagacctg ataagcgaag cgcatcaggc attgtgtagg cagcagaaat gtcggataag
    13021 gcaccgctga ttactgatac accggcagta aattaaagct cgataaaata tgtaccaatg
    13081 cgttgccgac gccaaacacc agaatcagcg taatcatcgg cttgccgccc cagacgcgga
    13141 atttcgggct gccaaagcgt ttacgcgatg cgcgggccag cagtgccgga acaattgccg
    13201 cccagatggt agccgctaaa ccagcataac caatggcgta caggaatcca ttcgggaaca
    13261 gcagaccacc cacaacaggc ggtgcaaagg tcaacaatgc tgttttcaag cggcccatag
    13321 ccgagtcatc gaaaccaaac agatctgcca gatagtcaaa caaacccagc gttacgccaa
    13381 ggaacgaact cgctaccgca aagtttgaga acacgaccag cagaaggtcc aggctacggc
    13441 tgttcagcac gccgcttaat gcctgtacca gcacatcaat attaccgccc ttctctgcaa
    13501 taccgataaa ctccggacgc gggatgttac ccatcgtcgc cagcaaccag atggtataca
    13561 gcgccagtgc catcagcgta ccgtacacca ggcatttcac gatggttttc ggatctttgc
    13621 cgtaatactt catcaggctt ggcacgttac cgtgataacc aaacgacgcc aggcagaacg
    13681 gcaatgtcat cagcagatac ggcgcataag atgcattgct ttctgcaacg ttgaacaatg
    13741 tcgcaggctg cacatgcccc aacaggctgc caaaggtgag gaagaaggta atgactttcg
    13801 cccccagcac aatcgccgtc atgcggctga cggccttagt actcaaccac accacaaacg
    13861 ctaccagcag tgcaaaacca aaacccgccg cccgtgccgg gacgtttagc gacatctctg
    13921 cgaaggtgtg atgcagaatt gaaccactgg cagaaatata ggcataggtc aggatataga
    13981 gcacaaaggc aatggaaata ccgttgacca cgttccagcc tttgcccagc aaatctttgg
    14041 tgatggtgtc aaaactcgaa ccgattcggt aattcaggtt agcttccaga atcatcaagc
    14101 cggaatgcag catacagaac caggtaaaga tcagcgccgc cattgaccag aaaaaccacg
    14161 ccccggacat gaccactggc agagaaaaca tccctgcgcc aataatggtg ccgccgataa
    14221 tcaccacgcc gccaagcagc gacggtgacg tttgggtggt ggttagtgtt gccatgaggg
    14281 cttctctcca gtgaaaaata gtgcgactgc gttgttatgc attgcactgt accagtacgc
    14341 gagtacaaaa gacagaaaaa aagccccgat ggtaaaaatc ggggctgtat atattatttt
    14401 acagattgtg ttcgctgttc agcgatgatt acgcatcacc accgaaacga cgacgaccgg
    14461 tagagtcatc acgacgcgga gcgcggcctt cacgacgttc gccgctaaaa cgacgaccat
    14521 caccacggcc accttcacgg cgttcaccgc tgaagttacg accgccttca cgacgttcgc
    14581 caccgaaacc acgaccaccg ccacgacgct caccgccagt atgcggctgt gcatcgccca
    14641 gtaactgcat gttcatcggc ttgttgagaa tgcgagtgcg cgtaaagtgt tgcagcactt
    14701 cacccggcat acctttcggc agttcgatgg tggagtgaga agcaaacagc ttgatgttac
    14761 caatgtaacg gctgctgatg tcgccttcgt tagcaatcgc accaacgata tgacgaactt
    14821 caacaccatc atcacggccc acttcaatgc ggtacagctg catatcgcca acatcacgac
    14881 gttcacgacg cggacgatct tcacggtcac cacgcgggcc acggtcgtta cgatcgcgcg
    14941 gaccacggtc atcacggtca cggaattcac gtttcggacg catcggcgca tctggcggta
    15001 cgatcagagt acgttcaccc tgtgccattt tcagcagtgc cgcagccaga gtttcgagat
    15061 ccagctcttc accttctgca gtcggctgaa ttttgctcag cagtgcgcgg tattgatcca
    15121 gatcgctgct ttccagctgc tgctgtactt tagcggcgaa tttttccaga cggcgtttgc
    15181 ccagcagttc tgcgttcggc agttctactt ccggaatagt cagcttcata gtacgttcaa
    15241 tgttgcgcag cagacgacgc tcgcggttct caacgaacag cagcgcgcgg ccagcacgac
    15301 ccgcacgacc ggtacgaccg atacggtgaa cgtaagactc agaatccatc gggatatcgt
    15361 agttaactac caggctgata cgctcaacgt ccaggccacg ggctgcaacg tcggtcgcaa
    15421 tcaggatgtc cagacgacca tctttcaggc gttccagtgt ctgttcacgc agcgcctggt
    15481 tcatgtcacc gttcagcgcg gcgctgttgt agccgttacg ctcaagagct tcagccactt
    15541 ccagagtcgc gtttttggta cgaacgaaga taatcgccgc atcaaaatct tccgcttcca
    15601 ggaaacgtac cagtgcttcg tttttgcgca taccccagac agtccagtag ctctggctga
    15661 tgtcaggacg ggtagtcacg ctggactgaa tgcgcacttc ctgcggctct ttcataaagc
    15721 ggcgggtaat gcgacgaatc gcttccggca tggttgcaga gaacagagcg gtctgatgac
    15781 cttccgggat ctgcgccata atggtttcaa cgtcttcgat gaagcccatg cgcagcattt
    15841 cgtcagcttc atccagaacc agaccgctca gtttagagag gtccagagtg ccacgtttca
    15901 ggtggtccag cagacggccc ggagtaccga caacgatctg cggcccctga cgcagggcgc
    15961 gtaattgcac gtcataacgc tggccgccgt acagagcaac cacatttacg ccgcgcatgt
    16021 gtttagagaa atccgtcatt gcttcagcaa cctgtaccgc cagttcgcgg gtcggtgcca
    16081 gcaccagaat ctgtggtgct ttcagctcag gatcaagatt ctgcaacaga ggtaaagaga
    16141 atgctgcagt ttttccgctc cccgtctggg ccatacccag aacgtcgcgg ccattcagca
    16201 gatgtggaat acactctgcc tgaattggag atggtttttc gtaacccaga tcgttaaggg
    16261 cttcaaggat aggagccttc aggcccagat ctgcaaaagt ggtttcgaat tcagccatgt
    16321 agtacgtgtg cctcaaaatt aatggcggcc agtctacata actcatcatg aaattgatca
    16381 gcaattttca ttgaaaagtg tgaaccggct caaagtaggt gtattaacga acaacaacgc
    16441 cctcacccct taaggtgatg gcaatcaaaa aagattacgg gctgatgtgt acgtcagcta
    16501 ttgctggtcc gattctgcca ggtcatcttg gtcctggccc aggagcgata attccaacaa
    16561 tgcgtatcgg tgctcaacaa agttatgaac gttgttggca accgccagtt tgaacagtgc
    16621 cgtggcgctg tccgaatccc ccagacttag gtagtactta cctaaataga agttggtttc
    16681 actgagatgc tcagcgagcg aggtgttatc cgttgcgtcc gccttgagcc tttccattaa
    16741 cgtttgttcg ctaatgttgc ccaggtagaa ctcgacaatg ttccatcccc actgttcctt
    16801 atccgatttt tcgaagtgct gtttcaacac ttctttagcc tgcttctcat cgagcttctg
    16861 ctcggcgaga taaagccaca gactacggaa aggatcattg ggatcgtctt gataaaacgc
    16921 cagcagatca tcttgcgcta acttgtcacg accgccgtaa tataatgcga tcccgcgatt
    16981 caagtgcgcg tagttgtaag ttggatcaag ctcaagtaca gaatcaaacg cttcataggc
    17041 agcatcaaaa ttgcctgcct gcgttaaata tatgcctaag taattgaaca cttcaggcat
    17101 atccggtcgg attgccagcg cttgcgaaaa atcgttacgc gctaatgccc tcagaccgag
    17161 actatcatac aacactccgc gctcatataa aagctgtgcg cgttcgtcat cggttaaagc
    17221 ccgactggca aggatttgtt ccatacgtgc cagaatcact tcctgctgta aagtcggttg
    17281 caatggtacc gcgaggactt cacttttacg ccaggaagta ttactgcatc ctgcaagcgt
    17341 aagtgctgtc gcaacgaaac accagcgcaa aaaaggcttc atttcccact cccgaagacc
    17401 acggttgaat gaacgtcctg ttcccggttg ctaacaaggc gtcctgcccg gttaaaagcc
    17461 ccccgccgca gcggagggca aatggcaacc ttactcgccc tgttcagcag ccggagcttc
    17521 cggtgctgca gcaggttgag actgctcagt cgcttcttta atgctcagac ggatacggcc
    17581 ctggcgatca acttccagaa ctttcaccgg tacttcctga cccatctgca ggtaatcggt
    17641 cactttctca acgcgtttgt cagcgatttg agagatgtgg accagacctt ctttaccgcc
    17701 gccgatggca acaaatgcgc caaagtcaac gatacgggtc actttaccag tgtagacgcg
    17761 gcccacttcg atttctgcag tgatctcttc gatacgacga atagcatgtt tcgctttctc
    17821 gccgtcggtc gctgcgatct tcacagtacc gtcatcttcg atttcgatgg tagtgccagt
    17881 ttcttcggtc agggcacgga taacagagcc gcctttaccg ataacgtctt tgatcttgtc
    17941 cgggttgatc ttgatggtat ggatacgcgg tgcgaactca gagatatcgc cacgcggcgc
    18001 gttgatcgcc tgttccatta cgcccaggat atgcagacgc gcacctttag cctggttcag
    18061 cgcaacctgc atgatctctt tggtgatacc ttcaattttg atatccatct gcaatgcaga
    18121 gataccctcg cgggaacccg caactttgaa gtccatatcg cccaggtgat cttcgtcgcc
    18181 caaaatgtca gacagtacaa cgtagttgtc gccttctttc accagaccca ttgcgatacc
    18241 cgcaacggca gctttgatcg gcacacctgc gtccatcagc gccagagacg cgccgcacac
    18301 ggaagccata gaagaggaac cgttggattc agtgatttca gacacaacac gtacggtgta
    18361 cgggaatttg tccatatccg gcatgactgc cagcacgctg cgcttcgcca gacgaccgtg
    18421 accaatttca cgacgcttcg gagaaccgac catgccggtt tcgcctacgg agtacggagg
    18481 gaagttgtag tggaacagga aggtatcggt acgttcgccc atcagttcat caagaacctg
    18541 cgcgtcacga gcagtaccca gcgttgcggt aaccagcgcc tgcgtttcac cacgggtgaa
    18601 cagcgcagaa ccgtgagtac gcggcagcac gccagtacgc acatccagac cacggatcat
    18661 atctttttca cgaccgtcga tacgcggttc gcctgccagt acgcggctac gaacaacgtt
    18721 tttctcgata gcgtgcagaa tttcacccag ttcgttttcg tccagggttt cgtcttcagc
    18781 aagcagcgtc gcgatggttt cagatttgat gacatcaacc tgcgcataac gctcttgttt
    18841 gtcggtgatg cggtaagcat cgctcaggcg agcttcagcc agtgcagcaa cgcgcgcgtt
    18901 cagcgcttcg tttaccggct ccggctgcca gtcccaacgt ggtttaccgg cttctttcac
    18961 cagttcattg atgttctgaa taacaacctg ctgttgttca tgaccgaaca ctactgcgcc
    19021 cagcatctgg tcttcgctca gcagttcagc ttcagattca accatcagaa cagcggcttc
    19081 agtaccggca acaaccagat ccagtttgct ctctttcagc tcgtcctgag tcgggttcag
    19141 tacgtactgg tcattgatgt aacctacgcg agcagcacca atcggaccat tgaacggaat
    19201 accagacaga gacagtgctg cggaagcacc aatcatcgcg acgatatccg ggttaacttg
    19261 cgggttaaca gaaaccacgg tggcgataac ctgaacttcg ttgacgaagc cttccgggaa
    19321 cagcgggcga atcgggcggt caatcagacg cgcgatcagg gtttcgcctt cgcttggacg
    19381 accttcacga cggaagaagc tacccgggat acgaccagca gcgtaggtac gctcctgata
    19441 gttaacggtc agtgggaaga agtcctgacc tggtttggct tttttctggc caacaacggt
    19501 aacaaatacc gcggtgtcat ccatgctaac cataacagcg gcagtagcct gacgagccat
    19561 catgccggtt tccagagtca cggtgtgttg gccgtactgg aatttacgaa cgatcggatt
    19621 aagcaatgta atatcctttc tctttcttag acagtacctt acggcactgg tgttaatacc
    19681 cgatcttctg cgcatcctcg cgactaatga caaccctaac ccagctctat gtgggtaaag
    19741 cctctcatta gccgcgcgaa cctctgcaac ggaagatcat tcatagcaac aatacattag
    19801 tttccagtga attgctgccg tcagcttgaa aaaaggggcc actcaggccc ccttttctga
    19861 aactcggcag gaattagcga cgcagaccca ggcgctcgat gagctgggtg taacgtgcta
    19921 cgtctttacg tttcaggtag tcgagcagtt tacgacgctg agaaaccatg cgcagcagac
    19981 cacgacggct gtggtgatct tttttgtgct ctgcaaagtg gccctgcagg tggttgatct
    20041 gtgcagtcag cagtgctacc tgaacttcgg tagaaccggt gtcgtttgcg tcacgaccaa
    20101 actcagaaac gattttagct gttgcttcag tacttagaga cattttaaaa ctccaaagta
    20161 tatagaatga aaggacgccg atctctaatt cagcgatccc agtgtacgtt acgcaaagtg
    20221 ttaaacaatt tacgcgacgt taagcggcag tattctactc gtagcgactt gttatcgcaa
    20281 gacggttaac attacgccgg gtattcaacc accaggcgac gaggcgcgac gcggccttca
    20341 tcgtcaattt cgcccatacc gataaacttg ccgttctcac cttctgtaac gcgaaccagt
    20401 ccttccagcg gcgcaccgga tgtacgaact gggttaccat ttttgaagta aacagaagac
    20461 gttaacggaa gattcaccac cgggtagtcc gaagctggac tgtccattgg catcagtaat
    20521 ggatcaagta actccgcagc cggaatatcc tgctgttcgg cttgttcgac cagttcacgc
    20581 agatgttcca gggtcaccat ccgttcaacc ggatatttac ttaccgccag acgacgcagg
    20641 taaataacat gcgcgccaca accgagtttt tcacccaggt catcaatgat ggtgcggata
    20701 taagtgcctt ttgagcagtg aatttccagc tccagctcat tgccttcgtg gcgaataaac
    20761 agcaattcat aaatggtaat cgggcgcgct tcacgcggta cttcaatgcc ctgacgcgca
    20821 tattcgtaca gttttttacc ctgatatttc agtgctgaat acatcgaagg gatctgttcg
    20881 atatcgccac ggaaagtatc cagcgccgcc gccagttgct ctgcgctaaa ggttaccgga
    20941 cgttcttcaa cgatttgtcc gtcggcatca gaagtatcgg tacgctgtcc aagacgcgca
    21001 atgacccgat agcgtttgtc ggagtccagc agatactggg aaaacttcgt cgcttccccg
    21061 aagcaaattg gcaacatgcc agttgccagc gggtccagcg caccggtatg cccggcacgg
    21121 ttggcgttat aaatccgttt cactttttgc agcgcatcat tgctggacat accctgcggt
    21181 ttatccagca acaaaacgcc gttaatgtcg cgaccgcgac gacgaggacg actcattagt
    21241 cctccttgct gtcgtccggg ttaacacgac gttcttcgtc atgtttgacc acgctggtca
    21301 ccaggtttga catgcgcatc ccttcaacca gagagttgtc gtagaagaag gtcagttccg
    21361 gcacgatacg caggcgcatc gctttcccca gcaggctgcg gatgaaacca gaagcttctt
    21421 gcaacgcttt gatgcccgct ttaaccgcgt cttcatcttt gtcgttgagg aacgtcacat
    21481 atactttggc atacgccagg tcgcgagaca tttcgacacc ggaaacggtg gtcatcatgc
    21541 ccaggcgagg atctttaatt tcacgctgca ggatgagagc gatctctttt tgcatttcct
    21601 gcgctacgcg ctgcgggcga ccaaattctt tcgccataat aaattctcct gacaaaaaag
    21661 ggactgttag ccccttttta aaattaattt caggtggaag ggctgttcac gttggcctga
    21721 taagacgcgc cagcgtcaca tcaggcaatc catgccggat gcggcgtaaa cgccttatcc
    21781 cgcatggaac cctaaaaacc ttaagcgatg gtacgttgga tctcgatgat ttcgaatact
    21841 tcgatcacat cgccagtgcg gacgtcgttg tagttcttaa cgccgatacc acattccata
    21901 ccgttacgga cttcgttaac gtcatctttg aagcggcgca gggactccag ctcgccttcg
    21961 tagataacca cgttgtcacg cagaacgcgg atcgggttgt gacgtttaac cacaccttcg
    22021 gtaaccatac agcctgcgat ggcaccaaat ttcggcgatt tgaacacgtc acgaacttcc
    22081 gccagaccga taatctgctg tttcagttcc ggagacagca taccgctcat cgccgctttc
    22141 acttcgtcaa tcaggttata gatgacggag tagtaacgca gatctaggct ttccgcttca
    22201 atcactttac gtgcagaggc atcagcacgt acgttgaagc caaccaggat ggcgttggac
    22261 gccgcagcca gggtggcgtc ggtttcggtg ataccaccta cgccagaacc gatgatcttc
    22321 actttaactt cgtcagtaga cagtttcagc aaggagtcgg agatcgcttc cacagaaccc
    22381 tgtacgtctg ccttcaggac gatgttcact tcgtgaactt cgccttcggt catgttggcg
    22441 aacatgttct cgagtttaga tttctgctga cgcgccagtt taacttcgcg gaatttaccc
    22501 tgacgataca gtgcaacttc acgcgctttc ttctcgtcac gtacaacggt aacttcatca
    22561 cccgcagccg gtacgccgga caggccgagg atttccaccg gaatggacgg acccgcttcc
    22621 agcacttcct gacccagttc gttacgcatc gcacgaacac gaccgtattc gaagccacac
    22681 agaacgatat cgcccttgtg cagagtacct tcacgtacca gaacggtagc aaccggacca
    22741 cgacctttat cgaggaagga ttcgataacc gcaccgctcg ccataccttt acgtaccgct
    22801 ttcagctcca gaacttccgc ctgcagcagg atagcgtcca gcagttcatc gatgccggta
    22861 cccgctttcg cagatacgtg tacgaactgg ctttcaccgc cccactcttc tggcaggatg
    22921 ccatactggg agagttcgtt cttaacacga tccggatcgg cttctggttt atcaatcttg
    22981 ttcactgcaa ccaccaccgg tacctgcgcc gctttcgcgt gctggattgc ttcgatggtc
    23041 tgcggcatca cgccgtcgtc ggcagcaaca accaggacta cgatgtccgt tgcctgcgca
    23101 ccacgagcac gcattgaagt aaacgcggcg tgccctgggg tgtccaggaa ggtgatcatg
    23161 ccgttttcag tttcaacgtg gtatgcacca atgtgctggg taatgccgcc cgcttcgcca
    23221 gaggccactt tcgttgaacg aatgtagtcc agcagagagg ttttaccgtg gtcaacgtga
    23281 cccatgatgg tcacaaccgg cgcgcgcggt tcagccgcag cccccgtgtc acggtcgctc
    23341 attaccgcct cttccagctc gttttcacga cgcaggataa ctttgtggcc catctcttca
    23401 gcaaccagct gtgcggtttc ctgatcgata acctggttga tggttgccat tgcgcccagt
    23461 ttcatcatcg ctttgatgac ctgagagcct ttaaccgcca tcttgttcgc cagttcgcca
    23521 acggtgatgg tttcgccgat cacaacgtca cggttaacgg cctgagctgg cttctggaag
    23581 ccttgctgca gggaagaacc tttacgtttt ccgcctttac ctccacgtac tgctgcgcga
    23641 gcttcttcac gatcagcttt tgattcagcg tgtttgttgc ctttcttcgg acgcgctgct
    23701 ttcgcgttac gaccacggcc acggccgcct tcgacttcac gatcgctttc gtcttctgcc
    23761 tggcgagcat gttgagaagt agtgacgtga taatcgctgg aatcttcagt cggttccgcg
    23821 ttatcagtcc atttgttttc ttccgccata cgacgtgctt cttcagcaac gcgacgtgct
    23881 tcttcttcga gtttacgacg cgcttcttct tcagctttac gcttgagctc tgcagcttcc
    23941 tgctcacggc gggctttttc agcctgggcg tttttagtca tatcgtcttg ttgattgctc
    24001 actttgtctt tttccgcagc ttcacgtttc gcttgttcag cagcttcacg cttagcttgt
    24061 tctgcggcct cacgttcagc tttttgttgc gcctcgcgtt tagccgattc ttctgcctca
    24121 cgacgggctt gctcttccgc tgcaaggcgt tcagcctctt gcggatcgcg tttcacaaag
    24181 gtgcgtttct tgcggacttc gatttgtacc gatttgcttt ttccaccggt accaggaatg
    24241 ttaagggtgc tgcgtgtttt acgttgcagc gtcaatttgt ccgggcctga atttttctga
    24301 ttcaggtggt caatcaaagt ctgtttctct tgtgcggaca cagagtcgtc agcagacttc
    24361 cggatacctg catcagcaaa ttgctgtacc aggcgttcca cggaggtctg tcgctctgcg
    24421 gccagcgttt taatcgttac atctgtcatg ctgttccttc ctgctacagt ttattacgct
    24481 tcgtcaccga accagcaaat attacgggca gccataatca gtgctccggc tttttcgtcg
    24541 gtcacccctt cgatatcagc cagatcatca atgccctgtt cggcgagatc ttccagcgta
    24601 caaacgccac gggcggccag tttgaatgcc aaatcacgat ctatcccttc aaggttcagc
    24661 agatcgtcag ccggtttgtt atcaccgagg ctttcttcct gggcctgtgc aatggtggcc
    24721 agtgcatttt tagcacgctc gcgcagtgct tcaacggtcg gctcatcaag gccttcgatt
    24781 tccaacagct ctttcatcgg cacataggcc agttcttcca gcgtcgagaa gccttcttct
    24841 accagaacag tcgagaagtc ttcgtcgatg tcgagatatt tggtgaaggt gtcgatcgct
    24901 gcgtgcgctt ccgcctgatg cttagcctgc aggtcgtcaa cggtcatcac gttgagttcc
    24961 caaccgctca gctgcgaagc cagacgcacg ttctgaccgt tacggccaat cgcctgcgcc
    25021 aggttaccgg cttcaacggc gatatccatg gtgtgtttat cttcatccac cacgatagaa
    25081 gcaacgtctg ccggtgccat tgcgttaatc acaaactgcg ccgggttatc atcccacagg
    25141 acgatatcga tacgctcgcc gcccagttca gtagaaaccg cctgaacacg cgcgccacgc
    25201 atacctacac aggcacctac cggatcgata cgtttatcgt tggttttcac cgcgattttc
    25261 gcacgagaac ccggatcgcg agccgctgct ttaatttcaa tcacttcttc gccgatttct
    25321 ggcacttcaa tacggaacag ttcgatcagc atttccggct tggaacgagt gacgaacagt
    25381 tgcgcgccac gcgcttccgg gcgaacggaa tagagcacgc cacgaacgcg gtcgccaggg
    25441 cggaagtttt cacgcggcag catatcttcg cgcaggatca cggcttcagc attgttgccc
    25501 agctccagag agatgttgtc gcggtttact tttttcacca cgccggtgat gatttcacct
    25561 tcgtgttcac ggaactgatc aaccaccatc gcacgttcgg cttcacgcac tttctgcacg
    25621 ataacctgtt ttgccgtctg ggtagtgata cggtcaaagg taacagactc aatctgatct
    25681 tcaacgtaat cgcccaggtt caggctttca tcttcataac gtgcggcttc aagggtgatt
    25741 tccttggtcg gctgggtgac ttcatcaaca actaaccagc gacggaaggt gtcaaaatca
    25801 ccgcttttgc gatcgatctg tacgcggacg tcgatctctt gttcatattt tttctttgtt
    25861 gctgtcgcca gcgcgctttc caatgcttcg aaaatcttct cgcgaggtag cgccttttca
    25921 ttggatacgg cttcaactac agccaaaatt tctttgttca tcgcgggctt ttcacctcat
    25981 ccagactatt aaaagtgggg aaccaggttc gccttctgga tattactcag cgcgaacact
    26041 tcatctttac cttcgacggt aactgtgatc atttcaccgt ctaccgcttt gataacgccc
    26101 tgccatttac gacggttttg taccgccata cggagaacca gagtcacctc ttctccgaca
    26161 aaacgggcgt agtgttcagc cgtgaacagt gggcgatcga gacccggtga ggagacttcc
    26221 aggttataag caacggtgat gggatcttca acatccagca cagcacttac ctggtggctc
    26281 acatcagcac aatcatcaac attgatgcca tcttcactat caatatagat gcgcagtgtg
    26341 gatgtgtgac cgcgaataaa ttcgatgcca accagttcaa aacccagggc ctcaactggc
    26401 gcagtaatca tctctgttaa tttttgctct aatgtggaca agcccacccc caagacataa
    26461 aaaaagggcc taaagcccag ttattctgta gtcagataac aaaaaacccc gataaatcgg
    26521 ggctttatat aactgaaccc tataatcgca actgcggtct ggagcacttt ccagaaggat
    26581 tttttcaaat cccactacga aggccgaagt cttcacagta tatttgaaaa aggactctaa
    26641 gggaaagtgg ttgcgggggc cggatttgaa ccgacgacct tcgggttatg agcccgacga
    26701 gctaccaggc tgctccaccc cgcgcctgaa actcggcaaa ttctactcgt tttgggtaaa
    26761 agatgcaaat actgctggga tttggtgtac cgagacggga cgtaaaatct gcaggcatta
    26821 tagtgatcca tgccacattt tgtcaacgtt tattgctaat cacgtgaatg aatatccagt
    26881 tcactttcat ttgttgaata cttttgcctt ctcctgctct cccttaagcg cattatttta
    26941 caaaaaacac actaaactct tcctgtctcc gataaaagat gattaaatga aaactcattt
    27001 attttgcata aaaattcagt gagagcggaa atccaggctc atcatcagtt aattaagcag
    27061 ggtgttattt tatgacgacg attctcaagc atctcccggt aggtcaacgt attggtatcg
    27121 ctttttctgg cggtctggac accagtgccg cactgctgtg gatgcgacaa aagggagcgg
    27181 ttccttatgc atatactgca aacctaggcc agccagacga agaggattat gatgcgatcc
    27241 ctcgtcgtgc catggaatac ggcgcggaga acgcacgtct gatcgactgc cgcaaacaac
    27301 tggtggccga aggtattgcc gctattcagt gtggcgcatt tcataacacc accggcggcc
    27361 tgacctattt caacacgacg ccgctgggcc gcgccgtgac tggtaccatg ctggttgctg
    27421 cgatgaaaga agatggcgtg aatatctggg gtgacggtag cacctataaa ggaaacgata
    27481 tcgaacgttt ctatcgttat ggtctgctga ccaatgctga actgcagatt tacaaaccgt
    27541 ggcttgatac tgactttatt gatgaactgg gcggccgtca tgagatgtct gaatttatga
    27601 ttgcctgcgg tttcgactac aaaatgtctg tcgaaaaagc ctactccaca gactccaaca
    27661 tgcttggtgc aacgcatgaa gcgaaggatc tggaatacct caactccagc gtcaaaatcg
    27721 tcaacccgat tatgggcgtg aaattctggg atgagagcgt gaagatcccg gcagaagaag
    27781 tcacagtacg ctttgagcaa ggtcatccgg tggcgctgaa cggtaaaacc tttagcaacg
    27841 acgtagaaat gatgctggaa gctaaccgca tcggcggtcg tcacggcctg ggcatgagcg
    27901 accagattga gaaccgtatc atcgaagcga aaagccgtgg tatttacgaa gctccgggga
    27961 tggcactgct gcacattgcg tatgaacgtc tgttgaccgg tattcacaac gaagacacca
    28021 ttgagcagta tcacgcgcat ggtcgtcagt tgggccgtct actgtaccag gggcgttggt
    28081 ttgactccca ggcgctgatg ctgcgtgact ctctgcaacg ctgggttgcc agccagatca
    28141 ctggtgaagt taccctggag ctgcgccgtg ggaacgatta ttcaatcctg aataccgtct
    28201 cagagaacct gacctacaag ccagagcgtc tgacgatgga aaaaggcgac tcggtgttct
    28261 cgccagatga tcgtattggt caattgacca tgcgtaatct ggatatcact gatacccgag
    28321 agaaactttt tggttatgcc aaaactggcc tgctctcctc ctctgccact tcaggcgtgc
    28381 cgcaggtgga gaatatggaa aacaaaggcc agtaattcga catcaaccct gcccttcagg
    28441 gggggggtta ccttgcttat cctctgtaaa ctcctttctg aacatcacat aatcgaaaac
    28501 atcatggttt gcatccacaa cccgtgagtc tcctttatag tgtgcaatca cttcctcaag
    28561 cgtttgcggc tgttccggct ttgttacccc catccacgca ttaataaggt aattattgta
    28621 agctgtcgaa aagatgttgt tttccgttgt gcgatccacg ccatccccaa gaacggggct
    28681 ataccagata aacatcggga catgatatgc ctgctggcta gcctccctgc ctccatgaaa
    28741 atagacgttc ttcttcgtag ggtcacgttc caggccgtgg tcggcaaaat acatgaccga
    28801 ggcgcggcga tcttttaata attcaaaaac ctgacctagc aaactatctg tgtaatgaat
    28861 ggagttgtca tagcaggcat cctgatcgtc ctgcggttga aacacggcgc tggattgcgg
    28921 ataggcgcta caagccggtt catggcttcc atttaaatga agaacaatca gtttcttttg
    28981 ctgcgtattt tgctgtaatg cttgcgataa atgcggcaac aacaattcat caaatcctct
    29041 gacataaact gtttccatgg cgcgcatggc gatactggta actgcagtac cattctgccg
    29101 aaaagcggat tgcgagctta gccagaaagt ctgaaatcct gcttgattag ccatattaat
    29161 aatgttgtcg gggtaattat gaatgtcatg actcaaaaca gaatcagcag ttaaagaaag
    29221 gggaaccgac agcgcagtgt aaggtgcgct gcttattgct tgattaaaca gtttgatctg
    29281 ttttctttgt gcttcaactt gcggtgtcgt agagcgtgta tatccataca aagacatatt
    29341 gtcgacacgt acagactccc ccacaatcaa cacgtaggta tcaatacctg tatccctgac
    29401 tgataattga aaatacggca ccgtgtttgc aattgagagt aatctttgat gctctttcgc
    29461 tgctaaagca aaatagttga gattgaaaaa cggcgtatag gtagcaaatc gcgacgctag
    29521 tatatatgga ctgaacgttt ttttattttt tgcatcttta taagcaaatt gacaagcgga
    29581 aaataaactg cccgaaatga caatcagcaa taatattcct gtcacttttt ttgtcggcaa
    29641 ggaaacatca tattttatta ttactgccca aaaaagaagg gataaaaaag caaaggcaca
    29701 tagataaggg atatacatcc ccagcatttt gacaacttca tccggatcac tctggagcac
    29761 actaatcgca aatccatcat tgaaagttgt accaaaggta caccatgaat agaggctaat
    29821 actcatgtct gccgcagtca gtaacacaaa tggtgcggca acaagcaggc gaagcggaag
    29881 ggatgatata cgttttacaa ccaggatggt caggacgaag aacagcaatc gctgaaccat
    29941 atgcgcgccg gaagaggcga ctaagttcgt aataccaaaa acaataacac aaagatacaa
    30001 caaccaatga gatttaaaac ttctagcaaa tttgttgaat actgtcatcc agaaatccaa
    30061 gttcacaacc aatataaaca attatcaaca atgttcaatt ttatatcaga catgtttttc
    30121 aactctgatc catatcagac cgaaacactg ttagtttttt ctttttaaat gatgcggcca
    30181 ttgcgttctc agtaattaaa taacattatc aatgcgtctc taaacattac gcagaacgta
    30241 gccatcagta gttatactga caggagcagg atggtttatc gagaagtaaa catatccgta
    30301 ttcgtaccgg aactggagtt gacacaataa agtgccaatt atgtcagcag aagggaaaag
    30361 tttataacta aggcgtaccg gcaccatcgt ttcaaggtac cagctacgag taaagcaact
    30421 ggacgagata cagatacctg acaaccattc ctcagaccag gaccaaaacg aaaaaagacg
    30481 cttttcagcg tctcttttct ggagtttggt accgaggacg ggacttgaac ccgtaagccc
    30541 tattgggcac taccacctca aggtagcgtg tctaccaatt ccaccacctc ggcacggata
    30601 ctacttttta gttcgggata tcgctggtcg gcttagccgg agcagctggt tgagtttgtt
    30661 cggttttcgc cggtgcactc agattgtccc attcgctacc tttattggtt ttgttgctgt
    30721 tgatgttacc cagcaccaga ctgatgatga agaataacgt tgccagcagc gccgtcatgc
    30781 gggtcatgaa gttaccagaa ccacttgaac caaacagcgt agcggaagcg cctgctccga
    30841 aggaggctcc catatcagcg cctttacctt gctgcagcat gatcagacca acaaggccaa
    30901 ttgccacaat aaggaaaact accaaaagag cttcgtacat aatcaacctg ttccttgcgg
    30961 agttgccgcg taccaatgct tcaaccaata aagcgggagt ttttaatctt tcccactgaa
    31021 gcgggtgtga atactaacca aagcgaatga ccttcgcaag ggcaatttta tcgcattgta
    31081 tcaactgcgg aaaaaaacag caaaaccgat gtgttcgctg agaaaaaagg cgacaatcgc
    31141 cgccttttta gccagtcatt tatcgtttta aacggctttt actgcatcgg cgatgcggtg
    31201 tgcaaattca gtcacctgcg cttcgtcttc gccttccacc atcacgcgaa ttaacggttc
    31261 ggtgccggat ttacgcagca acacgcgtcc acggttgccc agcgcagctt caacctctgc
    31321 ggtcacggct ttaactgact catgctcaag cggatcgccg ctacctgcgg tgtaacgcac
    31381 gttaaccaga atctgcggga acattttcat gccgctgcaa aggtcgtgca ggctcatatg
    31441 gttacgtgcc atcgccgcca gcacctgcaa gccagcaacg atgccgtcac cggtagtggt
    31501 tttatccagc aggatcacat gaccggaatt ctctgcaccg atacgccagc ctttctcctg
    31561 cattttttcc agtacgtagc ggtcacccac tttcgcgcgc gcaaatggaa tacctaactg
    31621 tttcagcgcc agctcaagcc ccatgttact catcaatgta cccacagcac caccacgcag
    31681 ctggccctga cgaagacctt cacgcgcgat gatatacatg atctgatcac catcgacttt
    31741 attgccttca tggtcaacca taatcacgcg atcgccgtcg ccgtcgaagg caataccgag
    31801 atccgctttt tcagccagca cacgagcctg gagcgcgcga acgtcggtag cccccacttc
    31861 ggcattgatg tttacaccgt tcggctcaca accgatagcg ataacgttcg cccccagttc
    31921 acgcagcacg ttcggcgcga tgtgataagt cgcaccgttt gcgcaatcca ccacaatctt
    31981 cagttcgctg aggctaagtt cgttcgggaa cgtggctttg caaaactcga tatagcgacc
    32041 cgcagcatca acgatacggc tggctttacc cagttctgcc gaatcaacac agctgatctc
    32101 tttttccatt tccgcttcga tggcctcttc taccgcatcc ggtagtttgg tgccgtcgat
    32161 agagaaaaat ttaatgccat tatcgtagaa cgggttatgc gatgcagata tcacaattcc
    32221 ggcctctgcg cggaaggtac gcgtcagata agccacggcc ggtgttggca tcgggccagt
    32281 gaagagtgcg gaaaggcccg ctgccgccag acccgcttcc agtgctgact ccagcatata
    32341 gccagaaata cgcgtgtctt tactaataat gatcttacgg gagccgtggc gcgccagcac
    32401 tttacccgcg gcccaaccca gcttaagcac aaaatcaggt gtgatcggcg catcccctac
    32461 acgaccacga atcccatcgg taccgaaata tttacgatta ctcatagcgt ttgttttcct
    32521 ttgcagacag agtggcttcc accacccgca tcgcttctac ggtttctttg acgtcatgaa
    32581 cacgaataat gtgcgcgcct tgcattgcgg caatgaccgc acaggccaga ctaccgctca
    32641 ggcgctcgga cggccccacg ttcagcagct gcccaatcat cgattttcgt gacataccta
    32701 ccaacagcgg caggttgaaa tggtgaaatt cagccaggcg cgccagtaat gaatagttat
    32761 gggagagatt tttaccgaaa ccgaatccgg ggtcgagcaa caatttctct tttgcgatac
    32821 ccgcctgctc gcaacgtgct atttgctcaa taaagtagcg attcacttct gcaaagacat
    32881 cgtcatactt cggagcttcc tgcatggttt ttggatttcc ctgcatatgc atcagacaaa
    32941 ccggtaaacc ggtttctgcc gccgcctcca gagcgccagg ttcggaaagg gagcggatat
    33001 cgttaataat gtgagcgcca actttcgctg actcacggat gacttctggt ttggatgtat
    33061 ctaccgagag ccagacttcg aagcgttgag caattgcctc aaccacagga ataacacgtt
    33121 gcaactcttc ttcaacgcta acttccgccg cccctgggcg cgtggactcg ccaccaacgt
    33181 caatgatcgt cgcgccagcg ttgatcatca gattcgcatg tttcaccgca tctatcagcg
    33241 agttatgcgt gccaccatcc gaaaaggaat caggcgtgac gttgaggatc cccattacgt
    33301 gaggatggct aaggtccagt gaagtgccct gggcaaagag tttcatggtg ttatccctgg
    33361 tatgaattga taagaaaaaa ccccggagca cgccccgggg ttttcggtac aaatacagtc
    33421 atctgatgcg ggaacttact tgtcgcctaa ctgctctgac atggtgttac ccgggttcgg
    33481 cgtacgcggt tcatcaaccg gacgaggagc ctttggacta ccattgtcgc cagaattgtt
    33541 agaagcgcct ggttcttccc agcccgctgg cggacgtaca tcgcgacgtg ccatcaggtc
    33601 atcaatctgc ggtgcgtcga tagtctcata tttcatgaga gcatctttca tcgcatgcag
    33661 aatatccata ttgtcggtca gaagctgacg cgcacgatta tagttacgct caatcagtgc
    33721 tttcacttcc tggtcgatga tacgtgcagt ttcatcggac atatgtttcg ctttcgctac
    33781 gctacggccg aggaacactt caccttcttc ttccgcgtac agcagtggac ccaatttctc
    33841 agagaagccc cactgagtca ccatattacg cgccaggttg gtcgcaactt taatatcgtt
    33901 ggacgcaccg gtagaaacat gttccggccc gtagatgatc tcttctgcca gacgaccacc
    33961 gtacagcgta gaaatctggc tttccagttt ctgacggctg gcgctgattg cgtcgccctc
    34021 aggcaagaag aaagtcacac ccagcgcacg accgcgtggg ataatcgtca ctttgtgcac
    34081 cggatcgtgt tccggcacca agcgaccgat aatcgcatga cccgcttcgt ggtaagccgt
    34141 cgattctttc tgcgcttccg tcatcaccat ggagcgacgt tccgcaccca tcatgatttt
    34201 atctttcgct ttttcgaact caatcatcga cacaacgcgt ttgttgccac gagcagcgaa
    34261 cagtgccgct tcgtttacca ggttcgccag gtcagcaccg gagaaaccag gagtaccacg
    34321 ggcaatgatt gccgcgtcga tatcgggtgc caatggtacg cgacgcatgt gaactttcag
    34381 gatctgctca cgaccgcgaa catctggcaa gccaaccaca acctgacggt cgaaacggcc
    34441 aggacgcagc agggctgggt caagaacgtc cggacggtta gtcgcggcga taacgatgat
    34501 accttcgtta ccttcgaagc catccatctc aaccagcatc tggttcagag tctgttcacg
    34561 ttcatcgtga ccaccgccca gaccagcgcc acgctggcgg cctacggcgt cgatttcatc
    34621 gataaagatg atgcacggtg ccgctttctt cgcctgttcg aacatgtcac gaacacggga
    34681 tgcacccaca ccgacgaaca tttctacgaa gtcagaaccg gagatagtaa agaacggaac
    34741 tttcgcttcg cctgcaatcg ctttcgccag caacgtttta ccggtacccg gaggaccgac
    34801 catcaggacg cctttcggga tcttaccgcc gagtttctgg aagcggctcg gctcgcgcag
    34861 atactctacc agttcagcaa cttcttcttt tgcttcgtcg cagcccgcaa cgtcagcaaa
    34921 ggtcgttttg atctgatctt ccgtcagcat gcgcgctttg ctcttaccaa acgacatggc
    34981 acctttgcca ccgccgccct gcatttgacg catgaagaag atccagacac caatcagcaa
    35041 cagcatcggg aaccaagaga tgaagataga agccagcagg cttggttctt caggcggttc
    35101 accgacaacc ttgacgttct tggtcaacag gttatccagt aatttcggat cctgaaccgg
    35161 aatgtaagtg gtataacggt tactatcttt cttggtaacg ttgatttcac gtccgttgat
    35221 acgcgcttca cgaacctggt cgttattgac ctcttgtagg aaggtagagt aatccacctt
    35281 acggccatta gactcgctgg gcccaaagct ctggaatact gacatcagca caacggcaat
    35341 gaccagccag agtattaggt ttttcgccat gtcactcaag ggattaacct cttattacaa
    35401 ctgtgttaaa aacagcgtca ggatactcta tatccagcat ctttcaaact ttcgtctgaa
    35461 atctcccggt tagggtttac gcccggtcgc tacaatatac acttcccgcg aacgtgcacg
    35521 agaagagtcc ggcttacgaa ctttgacctt cgtaaacagg gagcgaattt cccttagata
    35581 ctcatcgaaa ccttcgccct ggaacacctt cactacaaaa ctgccacctg gcgctaatac
    35641 atcacgacac atttctaacg ccagttccac cagatacatg gcacggggga tatccaccgc
    35701 cggtgttccg ctcatgtttg gtgccatatc ggacatgaca acctggactt tgctgtcgcc
    35761 aacgcgctcc agcagtgctt tcatcaccag ttcatcacga aaatcgccct gaagaaagtc
    35821 cacaccaacg ataggatcca taggtaaaag atcgcaagcg atgatgcggc ctttgccgcc
    35881 aatttgggtg accacatatt gtgaccaacc acccggagca gcaccaaggt cgacaaccgt
    35941 cattcccggt ttaaagagtt tgtcactttg ctgtatttca tcaagtttaa accaggcacg
    36001 ggaacgtaac ccctttttct gtgcctgttg aacatattta tcgctaaagt gttcctgaag
    36061 ccagcggctg gagctggcag aacgcttctt acctgtcatt taactttccc atggggataa
    36121 ctcatcgtaa ccaattgcgt aaatttttac gcgcctattt ggtgatatat gggagatggc
    36181 ggtagaatga cccgttttca atcccaacgt aagcaaaaaa tacgatgaat ctgagtacta
    36241 aacaaaaaca gcacctgaaa ggtctggcac atccgctcaa gccagttgtt ctgcttggca
    36301 gtaatggttt gaccgaaggg gtgctggccg agattgaaca agcgttagag caccatgaac
    36361 tcatcaaggt gaaaatcgcc accgaagatc gcgaaacaaa aaccttgatc gtggaagcta
    36421 tcgtgcgcga aaccggcgcc tgtaatgtac aggtcatcgg taaaacgctg gtgctttatc
    36481 gcccaactaa agaacgtaaa atctcgctgc cacgctaaga ttatcctaaa gttacacaca
    36541 tttgctgtgt aaaacgaggg gttttccgca ggcaggagag caaaatgcca cgctctgttc
    36601 gttgataaaa ggccgcatag cggccttttt cctttcttta caatacatca acatcttgat
    36661 gtattgggta attcttacag gtattccacc ttaattactt caaattctac ttcgccgccc
    36721 ggcgttttga tgaccacaac atcatcttct tctttgccga tcaggccacg agcaataggc
    36781 gagtttacag aaatcaggtt ttgtttaaag tcagcttcgt catcgccaac gatgcgataa
    36841 gtctgttctt cgtcagaatc cagattcagc accgttacgg tagcaccaaa aataacgcgc
    36901 ccattgttgg gcattttggt gacatcaatc acctgcgcgt tcgacagctt ggcttcgatg
    36961 tctttaatac ggccttcgca gaaaccctgc tgttcacgag ctgcgtggta ttcggcgttt
    37021 tctttcaggt cgccatgctc acgcgcttcc gcgatagcag caatgatttc aggacggcgc
    37081 acagatttca gaaaatccag ctcttcgcgt aatttttcag cgccgcgtaa ggtcatcgga
    37141 atagcttgca tttgttatac ctcttgaata ttcctgatgg ggcaagtctt cacccacccc
    37201 ggctgttcgg cctgcccggc ataactcctc accgggacca gaagcaaaaa aataccgacc
    37261 cgggtacaag tcccaggtca gctacaattc acattttgat agtcatttta ccctgaagtt
    37321 cccgaagggt catcgtttac tttatagggc gttgcgccgt agtatgacgg ctcgattcca
    37381 ggttgttagc gcgagattat gcgattttcc agatttatca tcggattgac cagctgtata
    37441 gcgttcagtg ttcaggccgc gaatgttgat gagtacgtta ctcaactccc cgctggtgcc
    37501 aaccttgccc tgatggtgca aaaagtcggc gcgtcggccc ccgctattga ttaccacagt
    37561 cagcagatgg cgctgcccgc cagtacgcag aaagtgatta ctgcgctggc ggcgttgatt
    37621 caactcggcc ccgattttcg tttcaccacg acgcttgaaa ccaaaggcaa tgtggaaaac
    37681 ggcgtactta agggtgactt agtggcgcga tttggtgccg atccgacgtt aaaacgtcag
    37741 gatattcgca atatgatcgc gactttgaaa aaatctggcg tcaaccaaat cgatggcaat
    37801 gtgttgatag atacctccat tttcgccagc cacgataaag cccccggctg gccatggaat
    37861 gacatgacac aatgctttag cgctccgcct gccgctgcca tagttgaccg caactgtttc
    37921 tccgtctcgc tctacagtgc cccaaaacct ggtgatatgg cttttatacg cgtggcatct
    37981 tattaccccg ttacgatgtt cagccaggta cgcaccctcc cccgaggttc tgccgaagcg
    38041 caatactgcg aactggatgt cataccaggc gacctgaacc gctttacgct gacgggatgc
    38101 ctgccacaac gttctgagcc gctcccgttg gcttttgccg tgcaggatgg agccagctat
    38161 gccggggcaa ttctgaaaga tgagttaaaa caggcaggta tcacctggag cggaacactg
    38221 ctgcgccaga ctcaggttaa cgaacctgga acggtagttg ccagtaaaca gtcggccccg
    38281 ttgcacgatc tgcttaagat tatgctgaaa aagtcggaca acatgatcgc cgatacggtt
    38341 ttccgcatga taggccatgc gcgcttcaat gtgcctggaa catggcgggc cgggtcggac
    38401 gccgtgcgtc agatcctgcg ccagcaagcc ggtgtcgata ttggaaacac cattattgcc
    38461 gatggttcag ggctttcgcg gcataacctg attgcccccg ccaccatgat gcaggtgttg
    38521 caatacattg cccaacacga caatgaactt aactttatct ccatgctgcc gctggcgggc
    38581 tatgatggct ctttgcagta ccgtgcaggt ctgcatcagg cgggcgtgga tggaaaagtc
    38641 tcagcgaaaa ccggttcgtt gcagggggta tataacctgg cgggattcat taccacagcg
    38701 agcgggcaac gaatggcgtt tgtacaatat ctttctggct atgcagtaga accggcggat
    38761 cagcgtaatc gccgtattcc gttagtgcgt tttgaaagcc gtttgtataa agatatttat
    38821 cagaacaatt agtcaaaaag aaaccccggc acatggccgg ggttttgctg attaacgctt
    38881 gtaaatgaac tcaacgcctt cttcgtcgtc ttcgtcccag tcatcatccc agtcctcatc
    38941 atcctcttca gcaatctctt caagctgctg gcgatgataa tcatcccaca tgaattcgac
    39001 tttctctggc tgtttcgctt cttcagcctg cacgaccggg ttttcaatga taaaggtcat
    39061 cacatcccag cagagatctt tcacgcccag tccactcgcc gcagagatca gataatattt
    39121 atcttcccag cccagcgctt cagcaatcgc tttcgctttc tcttcagctt ctgccttatc
    39181 cagcagatcg atcttattga acactaacca acgcggtttc gccgccagat cctggctgta
    39241 tttttccagc tcgctgataa taatacgcgc gttttcaacc ggatcggtgc cgtcaatcgg
    39301 atcgatatcg atgaggtgca acaggacgcg gcaacgttcc aggtgcttca ggaagcggat
    39361 acccagacct gcgccttccg cagcgccttc aatcagtcct ggaatatcgg caacaacgaa
    39421 gctcttttcg ttgtccattc gtaccacacc cagacttggc accagagtgg taaacggata
    39481 atccgccact ttcggtttag ccgccgatac cgcgcgaata aaggtcgatt tacccgcgtt
    39541 tggcatcccc aacataccga cgtcagccag cagcatcagc tccagcagca gctcacgctt
    39601 atcacccggc gtaccgttgg ttttctgccg tggtgtacgg ttaacggacg atttgaaacg
    39661 ggtattgccc agaccgtgcc agccgccctt agcaaccagc agacgctgac cgtgtttagt
    39721 catatcgccc atggtttcac cagtaccctg gtcgattaca cgcgtaccta ccggcacttt
    39781 aatcgtcacg tctttaccgc gcttaccggt acaatcgcgg cttgcgccgt tctgaccgcg
    39841 ctctgcacgg aaagattttt caaaacgata atcgataagc gtgttcaggt tttcgtcggc
    39901 ttccatccat acgtcaccac catcaccacc gtcgccgcca tccgggccgc ctttcggaat
    39961 atacttttcg cggcggaagc tcacgcaacc attaccgcca tcacctgcaa cgaccagaat
    40021 cgatgcttca tcaacaaact tcattttatt ctccgtaaat cattcgcctg cgcggggttg
    40081 cgataccacc gttgtatgct tacgtaatcc gccccaaata cgatgaccaa tggcggaata
    40141 catcgcgccc gcaaccacga caaacgcacc gagataacct aaaaggttta acatcggtct
    40201 ggcgaagaaa tcgggccagg ccagtgataa aagatctgaa aaaaacagcg taaacagtgg
    40261 ggtgagcgtg atgatcgcgc tcacctgcgc tgcctgccag cgagccatcg cttccgccag
    40321 ggcgccatat cctaccaatg tattcagtcc gcaaaaaatt aaacatgcga gctgccagtg
    40381 gctaagctgc gctatcactc ctggctttgc cagagggaag agcgcaattg tacataaagt
    40441 gtacagtaaa aacaggatct gcggtgaggc cagccgacgc aataaaacct tttgcgccac
    40501 gccataactc acccaaaccg tcgccgcacc gaccccaaag atgactcccc aggtgtaatc
    40561 agtgagcttt gtaaatatct cgaccagact ggtgttaaaa aacatcacca ggccgctcag
    40621 gagcatcaat gcccctacaa cctgagtgct gcgcattttc tctttcagga taaatacgct
    40681 ggcaaccatc atgccaactg gcgagagttg cccaatcacc tgcgaagcgg tcggactcag
    40741 gtattgcaag gatgagctga acaggatgaa gttcccaaac agcccggcgg tcgccactgc
    40801 caacaaaatc aaccagcgtg gcttacgaaa cacgcgtaat ggcggcaacc tcttcttcac
    40861 cgcaagaatg gcacccaggc caatactcgc catcaagaaa cggtaaaaca cgattgtcgg
    40921 aggttccatc acctccagca cctgcttcat tgcgattggc aacgcccccc agcaaattgc
    40981 tgtggtgagc gccaaaagaa tgccaatgcc tgcctgctgc ttcataccgt attccctgca
    41041 aagcgcattt gcggattaac gtcgcaccat gctcattttt accggttatc gaatgtaaaa
    41101 agccccgcaa cgtgttgcgg ggctttcatc cgttaccggg acgcgaaaaa cttattcagc
    41161 ttcgatgctg ataaatttac ggtttttcgg gcctttaact tcgaatttca ctttaccgtc
    41221 tgctttagca aacagagtgt ggtcacgacc gcaacctacg ttagcgccag cgtggaattt
    41281 ggtaccacgt tgacgaacga tgatgctacc cgccagaacg gattcgccac cgaaacgctt
    41341 aacgcccagg cgtttagctt ctgaatcgcg accgttacgt gtggagccgc cagccttttt
    41401 atgtgccatt tgaaatctct cctcaggtct taggcgctga tgccagtaat tttcacatca
    41461 gtgaaccact gacgatggcc ctgctgctta cgatagtgtt tacgacgacg aaacttaacg
    41521 attttaactt tctcgccacg accgtgagca acaacttcag ctttgattac gccgccatca
    41581 acgaaaggaa cgccgatttt gacttcttca ccgtttgcga tcatcagcac ttcagcgaac
    41641 tcaacagttt cgccagttgc gatgtccagc ttttccaggc gaacggtctg accttcgctt
    41701 actcggtgtt gtttaccacc actttggaaa accgcgtaca tataaaactc cgcttccgcg
    41761 cacacctttt caatgattca gagtgcgcta taaatattca caatagggcg cgaatattac
    41821 gcaaaacgca cgcctttgac aagtgctaca gtcaatacac gaagaaaaaa aacacaactt
    41881 gtacggtaac gtttatctgt gccatttttt cagtacaatc accctatatt cctaaccata
    41941 aaccctaagt tgcctttgtt cacagtaagg taatcggggc gaaaagcccg gcttttgcga
    42001 tgaatttaga aaaaatcaat gagttaaccg cgcaagatat ggcgggtgtt aatgcggcaa
    42061 tccttgagca gcttaattcc gacgtccaac tgatcaatca gttaggctat tacatcgtca
    42121 gcggcggcgg taaacgtatt cgtccgatga ttgctgtact ggctgcacga gctgttggct
    42181 atgagggaaa tgcgcatgtc accattgctg ccctgatcga gtttatccac acggcgactc
    42241 tgctacacga cgacgttgtg gatgaatcag atatgcgcag gggtaaagct accgccaacg
    42301 ctgcatttgg caatgccgcc agcgtgctgg taggcgattt tatttatacc cgcgcgttcc
    42361 agatgatgac cagcctcggt tcactcaaag tgctggaagt catgtcagaa gctgtaaacg
    42421 tcatcgcaga aggtgaagtt ctgcaactga tgaacgttaa cgatccggac atcactgaag
    42481 aaaactacat gcgcgttatc tatagcaaaa ccgcgcgtct gtttgaggct gccgcgcagt
    42541 gttccgggat tctggctggc tgtacgccgg aggaggagaa aggcctgcag gattatgggc
    42601 gctatctcgg cactgctttc cagttgatcg acgatttact cgattacaat gccgatggcg
    42661 aacagttagg taaaaacgtc ggcgacgatc tgaacgaagg taaaccgacg ctgccgctgc
    42721 tgcatgcgat gcatcatggc acaccagaac aggcacagat gatccgtacc gccatcgaac
    42781 agggtaacgg tcgccatctt ctggaaccgg ttctggaagc aatgaacgct tgtggatctc
    42841 ttgaatggac gcgtcagcgc gccgaggaag aagcagacaa agccatcgca gcgttacagg
    42901 tgctcccgga caccccttgg cgagaagcac tcatcggcct cgcgcacatc gctgttcaac
    42961 gcgatcgtta atcccctccc ttcatcccgc gcagtgcgcg ggatgattcc agtaaattcc
    43021 ataaaaacac taattcagcg ctataacacc tgaaaaaaaa ggcgatgaat ctttatatat
    43081 tctgaatatt cacactcttt acaggagctt tttagagcaa taggccatca ggagtatagt
    43141 gatgcccgac agaagaagtg ttctgaatga aagcgactaa cttaaggagt gaggaaagat
    43201 ggaaagtaat ttcattgact ggcatccccc tgacatcatt gcaggtttgc gcaagaaagg
    43261 aacgtcaatg gcggcggaat ctcgcagaaa tggtttgagt tcctcaacgc tggcaaacgc
    43321 attatcgcgc ccatggccga aaggagagat gattattgcg aaagccctgg gaactgaccc
    43381 ctgggttatc tggccatcac gctaccatga tccgcagacc catgagttta tcgacagaac
    43441 gcagttgatg cgtagctaca ctaaaccgaa aaaatgagtg gtctggcggt agccccgcga
    43501 acggggctgc cagctctcag acgattactc gcctttcaca cgcttaatat ttgcacctaa
    43561 agcgcgcagt ttgtcttcaa tgcgttcgta gccacgatcg atgtgataaa tacgatcaac
    43621 caccgtcgtc ccttccgcaa tacagccagc cagcaccagg cttgctgatg cacgcagatc
    43681 ggttgccata acctgtgcac cagaaagttt ttcaacacca tgacaaataa cggtattgct
    43741 ttcgatttcg gcatgcgcgc ccatacggct aagctccggc acatgcataa agcggttttc
    43801 aaagaccgtt tcggtgatga atccggtccc ttctgccacc aggttcaaca gcgtgaactg
    43861 ggcctgcata tcggtcggga atgccggatg cggcgcggta cgtacgttaa cagccttcgg
    43921 acgtttgcca tgcatatcca ggctaatcca gtcttcgccg acttcgatgt ccgctccagc
    43981 gtcacgcagt ttcgccagca cggcgtcgag agtatctggc tgcgcgttac ggcagataat
    44041 tttgccgcga gaaatcgccg ccgccaccag gaaagtaccg gtttcgatac gatccggtag
    44101 cacgcgatag acaccgccgc ctaaacgttc cacaccttcg atgacgatac gatcggtgcc
    44161 ctgaccgcta attttcgcac ccagcgtaat caggaagttc gcggtatcga cgatttccgg
    44221 ttcacgcgct gcgttttcaa taatcgtggt accttccgcc agggttgcag cacacatgat
    44281 ggtcaccgtt gcgccaacgc tgactttatc catcacgata tgtgcgcctt tcagacgacc
    44341 atcgacggaa gctttaacgt aaccttcttc cagtttgatg gtcgcgccta attgttcgag
    44401 gccagaaatg tgtagatcaa ccggacgcgc accgatcgta caaccgccag gcagtgaaac
    44461 ttgcccctga ccaaagcgcg ctaccagcgg ccccagtgcc cagatagaag cacgcatggt
    44521 tttaaccaga tcgtaaggtg cgcagaatac attaacgtcg cgggcatcaa tatgcacaga
    44581 accattacgt tctactttcg cacccagctg acttagcagc ttcattgatg tatcgacgtc
    44641 tttcagtttc gggacgttct ggatctctac cggttcttcc gccagtagag cggcaaaaag
    44701 gataggcaga gcagcatttt tagcgccgga aattgtgact tcgccctgga gcttcgttgg
    44761 cccctgaaca cgaaatttat ccatttagtt tgttctcagt taacaattca tatccgctac
    44821 cggcgaatcg cccatagctc aaaagccgtt cagtttgcga tcgcgcgccc actccgcagg
    44881 ggtatacgct ttgatcgaca cagcatgaat gcggttatcc gcaatatatt ccatcagcgg
    44941 gccatagacc gtctgctgtt ttttaacccg actcatgccg tcaaacaact cacccacggc
    45001 aataacctga aagtggctgc catcgccgga aacgtggact tcctggaggg agagagcgtt
    45061 catcaacacg ctctgaattt cattattttc catgggatct tcaatcatca gttaataaac
    45121 cagcgaaaca tcttagagca aagttgcgct ggcataaata agcaaaaagc ctcgctgata
    45181 aatcagacaa ggctcgactt gcaggcaggt ttgccggaca ggcggttaac gccatatccg
    45241 gcctgaaaaa atttaacgag gcagaacatc agcaggcaaa ttatacaatt tcgccagggt
    45301 atacactttg tcgtttaccc cctgaagcgt cacattgttg ccctgctttt tcgccagatc
    45361 gataagctgg agcagcagtg ccagtccccc cgtatccacg cgggacacac ggctaagatc
    45421 gatgcaggta atccccttca ccgcttcctc acgcatttcc caaagcggta gcaaaacgtc
    45481 ctgatccagc tctccggata acgccagcgt gtcacccgtc tgcatccagc tcagtgactc
    45541 gctcattatt ttttctcttc cagagtgatt ttctgttgag aaatcgattt cagttgcgca
    45601 gtcaggccgt cgataccttt ggtacgcagc agcgttcccc actcgttttg tttggtggtg
    45661 atcatactga cgccttcagc aatcatgtcg taagcctgcc agttgcccgt ctgggagttt
    45721 ttacgccact ggaagtccag acgcaccggc gggcggccat tcggatcaat aatggtaacg
    45781 cgaatcggca caatggtttt atcgcccagc ggctgttctg gcgcaatctg ataggtttga
    45841 ccatgataca tcgccagcgc ctgaccgtaa gcctgcttca ggtactcacg gaaagcggca
    45901 aagtaggctt cacgttgagc aggggtcgca ctcttgtaat actggcccag caccagcgca
    45961 ccggcgtatt tcacctgtac gtatggcagc agttcctgat caacaatggt acgcagataa
    46021 tccgggttgg cccgaatttg cggttgctca ttcttcaggc gatcgaacgt tttctgcgcc
    46081 gcctcgtcca tcagcttata aggattggtc tggtctgccg cggttgccgc actcagcggt
    46141 gcaatcacca gcaaagcgac catcattaaa cgtttaaaca tgcgtcggtt ctcctgaaat
    46201 tatttcgttg tacccacagg ttcagtggtt tcattattac ctggcgcagc agctggcgca
    46261 tcgccactat tcttattgtc atcgccttta ctaccgtaaa ggaactgacc aatgagatct
    46321 tccagcacca tcgcagactt agtgtcctga attgtatcgc catccttcag gatagcagtc
    46381 cccagttccg ggtcttcaaa accgacgttt aatgccagat attgttcccc cagtaggccg
    46441 gaagtacgaa tgctcagcga actggtatct ggaatgtggt tataacgttg ttcaatttcc
    46501 agcgttacgc gtggcagata ggttttcggg tccagcgtaa tatccgccac ccggcccaca
    46561 acaacgccac caatactgac cggagagcgc gctttcaggc cgccaatgtt atcgaacgtc
    46621 gcataaagcg tgtaggtcgg ttcagtacgt atggacgtca cgttcgccgc cttcaggcaa
    46681 acaaacagag ccgccagcag tgctgctaat aaaaagatac ccacccaaat ttcatttttt
    46741 ttcgtttgca tgtactcaat tcccaaacat caatgcggtc agcacaaaat ccagccccag
    46801 aacagccaga gacgagtgga caacggtgcg agtggttgcc cggctaatcc cggcagacgt
    46861 cgggatggcg tcgtagccgt taaacaacga aatccacgtc accgtgatgg cgaacaccac
    46921 gctcttaatc agacagttga ccagatccat acgccagtcg acggcatttt gcattgccga
    46981 ccagaagaac ccgctatcaa tgcctttcca actgacgccg accagagatc cgccccagat
    47041 ccccacggcg acgaaaataa ccgtcaacag tggtaatgaa ataaccccag cccagaaacg
    47101 gggagaaata acccgacgca gcggatccac cgccatcatc tccatactgg agagttgctc
    47161 tgtagcgcgc atcaggccga tttctgcggt tagcgccgaa ccagcacgcc cggcaaacaa
    47221 caacgcggca accaccggcc ccagttcacg cagtagcgat aacgccacca gcatacccag
    47281 actggtttcc gcactataag tggtcagaac cagataacct tgcagcccca acaccattcc
    47341 gatgaacacg ccagaaacca caataatcag catcgacagg acgccgacat tatagagctg
    47401 gcgcaccagc agcggcgcat gtttgcgaaa ttccggtttg ccgaccagcg cattgaataa
    47461 cattaacccg gcccgcccga acgttctcag ggttttaatc cctttatgtc cgagcgacgc
    47521 cagcgcattt aacagcatga gtggcttaac tccctggtaa aagatcagcg tgataatcgc
    47581 cggcaggata gcggaacgga acaggcccgt cagctatccc gtccagaaac tgacgtacgc
    47641 gcggatcagg attcgcctgc aacgcctggg cactgccatg agcgacaatt tttttgtccg
    47701 ccaggatcca ggcgtgatcc gcaatactta acacttccgg cacatcgtga gaaaccacca
    47761 cacaagtcac gcccagcgcg ctgttcagct cagaaatcag cttcaccagt acgcccatgg
    47821 tgatgggatc ttgcccaaca aaaggttcat caaacatgat gagatccggc tccagcgcaa
    47881 tcgcacgcgc cagcgctgca cgccgcgcca tcccaccgga aagttcagaa ggcattagtt
    47941 tagccgctcc acgcagcccc acggcctcca gcttcatcat caccgtacta tgcaacaatg
    48001 gcgcgggaag ttgggtatgt tcgcgcagtg gataggcgac gttgtcaaat acgttcatat
    48061 cagtgaacaa cgccccggac tgaaataaca tgctcatccg tttgcgcact gtatacaggc
    48121 gcgaacgaga catcgccgga atattctcac catcgaaaag gatctcacca tgatctggtg
    48181 cgatttgccc gccaatcaga cggagtagcg tcgttttacc gatgcccgat ggccccatga
    48241 tcgccgtgat cttccctcgc ggcacggtca gggaaatatt atcgaagatg cagcgattgc
    48301 cacgcgtaaa actgacatcg cgcatatcga ctaaattcgc cacagactgc tccataattc
    48361 acccttcgtc ttgcgttgat tttctaagca tggcgctcaa tttaaccttg aacccaacat
    48421 atttacagaa tattacccgc cgtggttagc gaaagctggc atttgtttta ctttttagcc
    48481 gcataaagtc aaaattaaga atccgttacg gctttctgaa aatcttcagc ggaccggcga
    48541 gtatacctga agaaaggacg ttagatgctt ttagctacgg cactgttaat tgttggttta
    48601 cttttggtcg tttacagtgc cgaccgcctg gtttttgccg cgtctattct ttgccgaacc
    48661 tttggcatcc cgccgctgat catcggcatg acggtggtca gtattggtac atcgttacca
    48721 gaaatcatcg tctcgcttgc cgcgtctctg cacgaacaac gcgatttagc cgttggtaca
    48781 gccctcggct caaacattat caatattttg ctgatcctcg gtctggctgc gctggttcgt
    48841 ccttttaccg tccattccga tgttctgcgt cgtgaattac ccttaatgtt gttggtcagc
    48901 gtagtggccg gttccgtact ctatgacgga caacttagtc gcagcgatgg tatctttctc
    48961 ctctttctgg ctgtgctatg gctgctgttc attgttaaac ttgcacgtca ggctgaacgt
    49021 caggggactg acagcctgac cagagagcag cttgcagagc tgccgcgtga cggcggattg
    49081 cccgtcgcgt ttttatggct cggcattgcg cttatcatca tgccagtggc cacgcggatg
    49141 gtggttgata acgccacggt gctggcgaat tactttgcca tcagcgagtt gacgatgggt
    49201 ctgacggcaa ttgctatcgg aaccagcctg ccggaactgg caaccgcaat agcgggggtt
    49261 cgcaaaggtg aaaacgacat tgctgtcgga aatatcattg gcgcaaacat ttttaatatt
    49321 gtcatcgtgt tgggtttacc cgcgctgata acaccaggag agattgatcc attggcgtac
    49381 agtcgtgact acagcgtgat gttgctggtg agcattattt ttgcgttgct gtgctggcgg
    49441 cgctccccgc aaccgggccg tggtgtaggg gtattattaa ctggcggatt tatcgtatgg
    49501 ctggcgatgt tgtactggtt atcgccaata ctcgttgaat aactggaaac gcattatgtc
    49561 gcacgtagag ttacaaccgg gttttgactt tcagcaagca ggtaaagaag tcctggcgat
    49621 tgaacgtgaa tgcctggcgg agcttgatca atacatcaat cagaatttca cgcttgcctg
    49681 tgaaaagatg ttctggtgta aagggaaagt tgtcgtcatg gggatgggga aatcggggca
    49741 catcgggcgc aaaatggccg caacgtttgc cagcaccggt acaccttcat ttttcgtcca
    49801 tcctggtgaa gccgcgcatg gtgatttagg catggtcacc ccacaggatg tggtgattgc
    49861 tatctctaac tcaggtgaat ccagcgaaat cacggcctta attccagtgc ttaagcgtct
    49921 tcacgtaccg ttaatctgca tcaccggtcg cccggagagc agcatggcgc gcgccgcaga
    49981 tgtgcatctg tgtgttaaag tagcgaaaga agcctgtccg ttagggctgg caccgaccag
    50041 cagcaccacc gccacgctgg ttatgggcga tgccctcgct gtcgcgctgt taaaagcacg
    50101 cggctttact gctgaagatt ttgcgctctc acacccaggc ggcgcactgg gtcgtaaact
    50161 tctgctgcgc gtaaacgata ttatgcatac gggcgatgag atcccgcatg ttaagaaaac
    50221 ggccagtctg cgtgacgcat tgctggaagt tacccgcaaa aatcttggta tgactgtcat
    50281 ttgcgatgac aatatgatga ttgaaggcat ctttaccgac ggtgatttac gccgtgtctt
    50341 cgatatggga gtggatgttc gtcagttaag tattgccgat gtgatgacgc cggggggaat
    50401 acgcgtgcgc cctggcattc tggccgttga ggcactgaac ttaatgcagt cccgccatat
    50461 cacctccgtg atggttgccg atggcgacca tttactcggt gtgttacata tgcatgattt
    50521 actgcgtgca ggcgtagtgt aaagattcaa ggataaacaa caatgagcaa agcaggtgcg
    50581 tcgcttgcga cctgttacgg ccctgtcagc gccgacgtta tagcaaaagc agagaacatt
    50641 cgtctgctga tcctcgacgt tgatggcgta ctgtcagatg gcctgattta tatgggcaat
    50701 aacggcgaag agctgaaagc gttcaatgtt cgtgacggtt atggcattcg ttgtgcgctc
    50761 acctctgata ttgaagtcgc tatcattacc gggcgaaagg ctaaactggt agaagatcgt
    50821 tgtgccacat tggggatcac tcacttgtat caggggcagt caaacaaact gatcgccttt
    50881 agcgaactgc tggaaaaact ggcgattgcc ccggaaaatg tggcttatgt cggcgatgat
    50941 ctcatcgact ggccggtaat ggaaaaagtg ggtttaagcg tcgccgtggc cgatgctcat
    51001 ccactgttga tcccgcgcgc cgattatgtg acgcgcattg ctggcggtcg tggcgcagtg
    51061 cgagaagttt gcgacttatt actcctggcg cagggcaaac tggatgaagc caaagggcaa
    51121 tcgatatgag taaagccaga cgttgggtta ccattgtgct atcactggcg gttctggtga
    51181 tgatcggcat taatatggcc gaaaaagacg ataccgccca ggtggtcgtc aacaacaatg
    51241 atcccaccta taaaagcgag catacggaca cgctcgtcta taacccagaa ggggcactaa
    51301 gctatcgatt gattgctcaa cacgttgaat attattccga tcaggccgtt tcgtggttta
    51361 cgcagccggt acttaccacg tttgataagg ataaaatccc gacatggtcc gtaaaagcag
    51421 ataaagccaa gctgaccaat gaccggatgc tctatttata tggacacgtt gaagtcaacg
    51481 cacttgtgcc ggactctcaa cttcgcagaa tcacgacgga taacgcgcag atcaatctgg
    51541 tgacgcagga tgttacctct gaagacctcg tcacgttata cggaacaaca tttaactcca
    51601 gcggtctgaa aatgcgcggc aacttacgca gcaagaacgc cgagctgatt gaaaaggtta
    51661 gaacatccta tgaaattcaa aacaaacaaa ctcagcctta atcttgtgct tgccagctca
    51721 cttctggccg ccagcattcc ggcatttgcc gtaaccggag acactgatca gccgatccac
    51781 attgaatcgg accagcaatc tcttgatatg caaggcaacg tggttacctt taccggtaat
    51841 gtcatcgtca cccagggcac catcaaaatt aatgccgaca aagtggtcgt tacccgtccg
    51901 ggcggcgaac aaggtaaaga agtgattgac ggctacggta aaccggcaac gttctaccag
    51961 atgcaggaca acggtaaacc cgttgaaggt catgcttccc agatgcacta cgaactggca
    52021 aaagattttg tcgttctgac gggtaatgct tatctgcagc aggtcgatag caacattaag
    52081 ggcgataaga tcacttacct ggtgaaagag cagaaaatgc aggctttcag cgacaaaggc
    52141 aagcgcgtaa caaccgttct ggtgccgtcg cagctgcagg acaaaaacaa caaaggccag
    52201 accccggcac agaagaaggg taattaattc gttatggcaa cattaactgc aaagaacctt
    52261 gcaaaagcct ataaaggccg tcgcgtggta gaagacgtca gcctgaccgt caactccggg
    52321 gaaattgtcg gtctgctggg gccaaacggt gccggtaaga ccaccacttt ctatatggtt
    52381 gttggcattg tgccgcgcga tgcgggcaac atcattattg atgatgacga tatcagtctg
    52441 ctgcctctgc atgcacgcgc gcgccgcggt atcggctatc tgccacagga agcctccatt
    52501 ttccgtcgcc tcagcgttta cgataacctg atggcggtac tgcaaattcg tgacgacttg
    52561 tctgctgaac aacgtgaaga ccgcgcgaac gagctgatgg aagagtttca cattgagcac
    52621 ctgcgtgaca gcatggggca gtcactctcc gggggtgaac gtcgccgtgt agaaattgcc
    52681 cgcgcactgg ctgcgaatcc gaaatttatt ctactcgacg aaccgtttgc cggggttgac
    52741 ccgatctcgg ttatcgacat taaacgcatc attgaacacc tgcgcgacag cggcctgggc
    52801 gtactgatca ctgaccacaa cgtgcgtgaa acactggcgg tttgtgaacg cgcttatatc
    52861 gtcagtcagg ggcatttgat tgcccacggc acgcctacag aaatcttaca agacgaacac
    52921 gttaagcgtg tataccttgg ggaagacttc agactctgat agggtagaag tttgcgacgt
    52981 tttagcagga gagtacgatt ctgaacatga agcaaggttt gcaactcagg cttagccaac
    53041 aactggcgat gacgccacag cttcaacagg cgattcgtct gttgcagttg tcgacgctgg
    53101 aacttcagca ggagctacag caggcgctgg agagtaatcc gctgcttgag caaatcgaca
    53161 ctcatgaaga aatcgacacc agcgaaacgc aagacagtga aacgctggac accgccgacg
    53221 cgctcgaaca aaaagagatg ccggaagagc tgccgctcga tgccagttgg gacaccattt
    53281 acaccgctgg tacaccatcc ggcaccagcg gtgactacat tgacgatgag ctgccggtct
    53341 atcagggcga aacgacgcag accttgcagg attacctgat gtggcaggtc gagctgacac
    53401 cgttttccga cactgaccgc gctattgcta cctctatcgt cgatgccgtt gatgacaccg
    53461 gttatctgac tgtcccgctg gaagatattc tcgaaagtat gggcgatgaa gagatcgaca
    53521 tcgacgaggt tgaagccgtc cttaagcgga tccaacggtt tgatccggtc ggtgtagcgg
    53581 caaaagatct gcgtgactgc ctgctaatcc aactctccca attcgataaa accacgccgt
    53641 ggctggaaga ggccagactg atcattagcg atcatctcga tctgttagcc aatcacgact
    53701 tccgcacttt aatgcgcgtc acgcgtctga aagaagatgt gctgaaagaa gccgtcaatc
    53761 tgatccagtc gctcgatccg cgccccgggc agtcgatcca gactggcgaa cctgagtatg
    53821 tcattccaga tgtgctggtg cgtaagcata acggtcactg gacggtagaa ctcaacagtg
    53881 acagcattcc gcgtctgcaa atcaaccagc actacgcctc gatgtgcaat aacgcgcgca
    53941 acgatggtga cagccagttt atccgcagca atctgcagga tgccaaatgg ttgatcaaga
    54001 gtctggaaag ccgtaacgat acgctactgc gcgtgagtcg ctgtatcgtt gaacagcagc
    54061 aagccttctt tgagcaaggt gaagaatata tgaaaccgat ggtactggcc gatatcgccc
    54121 aggctgtcga aatgcatgaa tcgacgatat ctcgcgtgac cacgcaaaaa tacctgcata
    54181 gtccacgagg catttttgaa ctgaagtatt tcttttccag tcacgtcaat accgagggcg
    54241 gcggcgaagc ttcctccacg gcgattcgtg cgctggtgaa gaaattaatc gcggcggaaa
    54301 acccagcgaa accgttgagc gacagcaagt taacctcttt gctgtcggaa caaggtatca
    54361 tggtggcacg ccgcactgtt gcgaagtacc gagagtcttt atccattccg ccgtcaaacc
    54421 agcgtaaaca gctcgtttga cccaaccgat aaggaagaca ctatgcagct caacattacc
    54481 ggaaataacg tcgagatcac cgaggcactg cgcgaatttg ttagagccaa atttgccaaa
    54541 cttgagcaat attttgaccg aatcaaccag gtctatgttg ttctgaaagt ggagaaagtc
    54601 acccacacct cagatgcaac actgcatgta aacggtggtg aaattcatgc cagcgcggaa
    54661 ggtcaggaca tgtacgctgc cattgatggc ttaattgata agctggcacg ccagttgacc
    54721 aaacataaag ataaactgaa acaacactaa ttgtccgggc aattagcatg tgcatggcgg
    54781 cctgttgtgc ggcacaacgg gccatttgta cggttaatgc tccgagcctg ttccactgtt
    54841 tgagtgggca ggttcttagg tgaaattatg acaaataatg atacaactct acagcttagc
    54901 agtgttctta acagggaatg tacgcgaagc cgcgttcact gtcagagcaa aaaacgcgcc
    54961 ctggaaatca tcagcgagct ggcggcgaaa caacttagcc tgccgcctca ggtggttttt
    55021 gaagctatcc tgacgcggga aaaaatgggc agtaccggta tcggcaatgg tattgccatt
    55081 ccgcatggca aactggaaga agatactctg cgcgccgttg gcgttttcgt tcagctcgaa
    55141 acgcctatag ctttcgatgc catcgacaac caaccggtgg acttactttt tgccctgctg
    55201 gtgccggcag accaaactaa aacgcacctg catactctgt cgctggtggc gaaacgtctg
    55261 gcggacaaaa ccatctgccg ccgtttacgc gcagcccaga gcgatgaaga gctgtatcaa
    55321 atcattacgg ataccgaagg tactccggat gaagcgtagt tattcggtaa tgtctctttt
    55381 agacgttgtg aggagaaaca gtacatggta ctgatgatcg tcagcggacg ttcaggttca
    55441 ggtaaatctg tcgccctgcg tgcgctggaa gatatgggtt tttactgcgt ggataacctt
    55501 cccgtagtgt tgttacccga tctggctcga accctggccg atcgcgagat ttctgccgcc
    55561 gtcagcattg atgttcgtaa tatgccggag tcaccagaaa tattcgaaca ggcgatgagt
    55621 aacctgcctg acgctttctc accgcaactc ctgttcctgg atgccgaccg taatacctta
    55681 attcgtcgtt acagtgacac gcgccgactg catccgcttt ccagcaaaaa cctgtcgctg
    55741 gaaagtgcta tcgacaaaga aagcgatttg ctggagcctc tgcgttcgcg agcggatctg
    55801 attgtcgata cctcagaaat gtccgttcac gagctggctg aaatgctgcg tacccgtctg
    55861 ctgggtaaac gtgaacgcga actgaccatg gtctttgagt ctttcggctt caaacacggt
    55921 atccctatcg atgcagatta cgtctttgac gtgcgcttct tgccgaaccc gcactgggat
    55981 ccgaaactgc gtccaatgac aggtcttgat aaacctgtcg ccgcgttcct cgaccgccac
    56041 acagaagtac acaattttat ctaccagacg cgaagctatc ttgagctatg gttacctatg
    56101 ctggaaacca acaaccgtag ctacttgacg gtcgccattg gttgtaccgg cgggaagcac
    56161 cgttcggtgt atattgcaga gcaactggca gactacttcc gctcgcgcgg taaaaacgtc
    56221 cagtcacgcc atcgtacgct ggaaaaacgt aaaccatgac cgtcaagcaa actgttgaaa
    56281 tcacaaacaa gctgggcatg catgcccggc ctgcaatgaa gctgtttgaa ttaatgcagg
    56341 gttttgacgc tgaagtgctg ttacgtaatg acgaaggcac cgaggccgaa gccaacagcg
    56401 ttattgcgct gctgatgttg gattctgcca aaggacggca gattgaagtt gaagcgaccg
    56461 gcccacagga agaggaagca ctggccgccg ttatcgccct ctttaactct ggttttgatg
    56521 aagattaatc ttcatcactt tgacatacaa ctcccttcaa actccccccg acaataagaa
    56581 aatcacgtac tgaaatcgtt ctcaatcaac gtcatttgta cattttgtgc gcttttcact
    56641 ttcagaagaa ccttaagaaa accttaagag gcattgttta ggttttgttt aagttaatcg
    56701 accatactgg agatcgtcag aaaatatttc caggagatgg catgattcgc ttatctgaac
    56761 aaagtcccct gggcaccgga agacatcgga aatgttatgc gcatccggaa gatgcccaac
    56821 gctgtatcaa gattgtctac catcgtggcg atggtggcga taaagagatc cgccgtgagt
    56881 taaagtacta cgcgtatctt ggtcgccggt taaaagactg gagtggaata ccgcgctatc
    56941 acggtaccgt tgagacggat tgcggaaccg gttatgtcta cgatgtgatt gcagattttg
    57001 acggcaaacc ctccattacg ctgaccgaat ttgctgaaca atgccgttac gaagaagaca
    57061 ttgcacaact gcgccagcta ctgaaacagc tgaagcgtta tttgcaggat aaccgtatcg
    57121 tgacgatgtc gctgaagccg cagaatatcc tctgtcacca catcagtgag tcagaggtta
    57181 tcccggtcgt ctgcgacaac attggtgaaa gcacattgat tccactggcg acctggtcga
    57241 agtggtgttg tctgcgtaag caagagcggt tatggaaacg atttatcgcc caaccggcgc
    57301 tggctattgc cctgcagaaa gatctgcaac ctcgtgagag caaaacgctg gccctcactt
    57361 cgcgcgaagc ttaatccagc tggtgttgtt gcataaacgg ctcaccgcct aactgataca
    57421 tctgccgtaa aatccacgcc tgacggctac gcacgtagcc cgatggcgag gagactttga
    57481 aacgaagtgg attaggtaat acagctgcca gtaatgcagc ttccgaccgg gtaagtttgc
    57541 tcgcgggttt gtggaaataa cgttgtgccg cagcttcgac gccaaacaca ccgtcgccaa
    57601 attcggcgat attcaggtaa accgtcagga tacgcttttt gctccagact gtttctatcc
    57661 ccagcgttaa tccagcttcc agcccttttc gtacccagct acgcccatcc cataaaaaga
    57721 gatttttggc cgtctgctga gaaatcgttg aagcaccgcg aatacggttt tcattgcgct
    57781 cgttgtgcgc cagggctttc tcaatggaag cgacatcaaa gccccggtgc tcaggaaatt
    57841 tctgatcttc tgcggcaatc accgccagtc ccatccacgg cgagatttga tccatactga
    57901 cccagtcaga atgtgccacg taacgaaaat tgccatgcag ccaggcgctg acctgtcgct
    57961 cgaccattac cgctgagaag ggaacaggcg caacactaaa caacgcgatg cccccgcccc
    58021 agaaaacggc gaggacaacc attaaccgca aaagaaaacg gcgaacgaaa ctaaacaccg
    58081 ttaagcggct tttactcatt cagccagaac cagcacgcgg gaaaccagct tatcaatgcc
    58141 gctcgccgct tctgcaatgt tctgcgccag catatatgct ggggtggtga caatcttatt
    58201 gtcttcatca accacgatat catcgacagg acagggcaca tgctccgcgc ccatctcttc
    58261 cagcacttct gcggtatcga tatcagtacc gatggtcaaa cgcagcggga aatcgaaaat
    58321 tttcggcagc atcgccgggg caatacacat aaaaccaagc ggttttccgg cctgatgcat
    58381 cgcttgtgcc agcgccttta attcacggtc aacggtgcat tcgctaccaa gagtggcaaa
    58441 attgcttaaa ttcttcgccg cgccaaaccc ccccggcaca atcaacgcat ccagttcagc
    58501 ggcatcggcc tgggccagag gacggatttc accgcgcgtt attcgtgccg cttcaatcag
    58561 cacgttgcgc gtttccgtca tcgcttcgcc agttaaatgg ttgataacat caacctgctg
    58621 cttatcaggt gcaaagcaga ccgcctgcgc accgctgcgt gaaatagcta acaacgtcaa
    58681 caccgcttca tgaatttcag aaccgtcata gacgccgcat ccgctcagaa ttacgccaat
    58741 tttcttcatt gtgatcatcc tttcgcaatt gactgaaaca cattaatttt tttaataaaa
    58801 atggtacgca tcacacattt aactgattca tgtaacaaat catttaagtt ttgctatctt
    58861 aactgcgtgc ggcctgaaaa acagtgctgt gcccttgtaa ctcatcataa taatttacgg
    58921 cgcagccaag atttccctgg tgttggcgca gtattcgcgc accccggtct agccggggtc
    58981 attttttagt ggcttttgcc acccacgctt tcagcacttc tacgtcgtga cgccactctt
    59041 ctttcatctc ttcaatccat tcaccgacgt tatcttccca ggcaggaagg tcaggagact
    59101 gaatttgctg acccagctgt tgcagatggc gtaaccccac tgaccccgcc gcacctttaa
    59161 ttttatgtcc ttcctcaaca atgccttttt tatcctgcgc cgtcagattc gactccagca
    59221 cgctgacata gcccggcatc atcttctcaa acaccgctaa cccgtcggtg atcagcttcg
    59281 gtcctacaag ttcgagatac tgttccagca tgggaatatc gagcaatgct tctgatttac
    59341 tgttctcttc tgtcgtcacc gtactctcct catcatcctg ggtatcccag aatttcttga
    59401 tcatcgcggt tagcgccgga accgaaagcg gcttactcag cacatcatcc attccagcat
    59461 tgaggtactc ttgtttgtct ttcagcacgt tagcggttaa ggccaccagc ggcggtaaat
    59521 cctcgcgcgg ataacgcttc gtcagttcac gagagatatc cagcccggtc atatctggca
    59581 actgaatatc cagcaacacc aggtcgtatt cgcccggttt aaacatctcc agcgccgcct
    59641 tgccggtcat ggcgacatca acgctgttac ctaatttttc cagcacagaa cgcgcaacaa
    59701 tcacgttcag ttcaatgtct tccaccagca gcacattcag cgccggtaaa ggcatatcgt
    59761 cttcatcaaa cgcatcatcg acctcttctg ctaccgacgg tgcgtggatc gtcaacgtaa
    59821 aggttgaacc tttgccctgt tcgctggtaa ccgtaatatc gccgcccata tttttcgcca
    59881 gacgacgaga aacggccaga ccaataccgg tgccggtggc aggtttaccg ccatgactgt
    59941 ctttcacctg gtaatacatg gcgaaaattt tatccagctc atcctgcgga atgccgatac
    60001 cagagtcttc cacttcaaaa tgcagcatat cgccttcatc gtagcgcacg cgcacggtaa
    60061 cctggccttg ctgggtgaat ttgacggcgt tactgatgag gttccacagg atctgccgta
    60121 aacgcgtccc gtcggtaatg acctgatgcg gtaatggcag cgtcggctcc aggttaaagc
    60181 gcaatccttt ttgttgcgcc tgcaatgcgg agagattttc cagatcggca aggaagctgg
    60241 tgaaatcaac cggttgatta tcaagctgga ccttgcgccg ttccatctta tccatgtcga
    60301 taatatcgtt aaagatattc cccagcgtga cggccgaaac atggatggtc ttgagatatt
    60361 tttcctgctc ggcggtgagt tcggtatcca gcagaatgcg gctcagaccg acgataccgt
    60421 tcagcggtgt acgcaattcg tgactgatgg tggagataaa cgtcgttttg tcgcggctgg
    60481 cccgttcaag cgcatcctga taccgcttac gctcggtaat gtcgcgacca aagcccatca
    60541 aaccgtgacg tttacccacg cggtcgtagt acggcacttt acggatttca aagcaggctt
    60601 tgcgcccgtc cgggtaatcc agccactgtt cataggtcag tgacacatta tgacggaaca
    60661 ctttttcatc ggtttcaatg acttttgcgg cggcttccgg tgagtaaaca tcagcaggtt
    60721 tcaggtgaac cagttgtttt tcgctttttc cggtcagcag ctccatcgcg cggttacagc
    60781 cggaaaactc tttatcttcg ttacgataaa aaaccaggtc gggtgaagca tcaaggaagg
    60841 aacgtaagaa tgaggattgc tgctcgagct gaatttgtgt ctcttcgcgc tctttgattt
    60901 caattttcag ttggccgaag gtttcctgca gttctgcttc cgctttttca cgaacggcaa
    60961 tttcctgatt tagctgggca atattatctt ttaactgaac gttgaggctc aaatcgcgct
    61021 cgcgcatctc ctccagtttt tgcaccagcc gtgacagacg ttgtcgtgac tcctccagtt
    61081 gctcgacgac caccgataga aagtagaccg cccacggcgt aatcagcaaa ccaaagaaga
    61141 tagaacgaat aacatcaatg ctttcgacct gaccatgcag caccatggtt accgccattt
    61201 gtaccacaat ggcaagaacg acgagggcca gcgccagcaa cattgagaag cgcaccagac
    61261 ctaacttcat catcaggtca acataatact gcgccagcag acgaatttgc ttcattaggg
    61321 aattccttca cgacaacctg ccccaataat acccaattct gacagttacg ttataaattg
    61381 tgtgagaaat gcggaattcc cctcaacgac ctactccgtt ggaggtagcc acggacgtcc
    61441 cagcgccgat ccctgtacgc catgttcatt cagatagcga tccagctcga ccattcccgt
    61501 ccatcgattt tcgcaccaca gcggagcaag cagcgtcggg cgacgggcgc tggcggaaat
    61561 gcggtggtag atcacttccg gtggcgtatg gcgaatcatt tctccggcag tgagcgtgta
    61621 atcctccagt tcaataccgt tcaaacgccc cgcttcccag gctttcgcca taatgctgcc
    61681 tttcacaata tgcagcggat gcagctttat gccgtccacg ccggtttcaa ccactcgctc
    61741 cagcgtttgc aaacattcag cctgcccttc accaggcagg ccgacaatta agtgggaaca
    61801 caccttcagc ccgcgctgac gtgccagctg ggttgtacgc tgataacagg caaaatcatg
    61861 gccgcggttg atgcgatgca gtgttttgtc gtgggcggtt tgtagcccca gctccagcca
    61921 cacttcgtaa ccctggtcct tatattcgca aagcagatcc agcaccgcat ccggcacgca
    61981 gtccgggcgg gtaccaacac acaaaccgac aatattggcc tggctcaccg cctgctgata
    62041 catagaacgc agcacctgaa cttccgcaaa ggtgctagta tacgcctgaa agtaggccag
    62101 atagcgttta gcgcggttaa ctaaattcgc ctggtgcgcc agttgctcgg caatggaacg
    62161 atgctgctgc gcttcatcgg caaacgaggc aacattacag aatgtgcagc caccacgccc
    62221 gatggtaccg tcacggttag ggcagctaaa accgccgtgc agcgtcagct tatgcacctt
    62281 ttgcccataa cgacgggtga gatcaccacc aaacatattg actaatttct gtaactgcat
    62341 aatctgatag accgcgcctt gaaaagaggc caaagcctgc catttttagc tcaattcggc
    62401 gatgacctgg atcaatcgtc ccggcctgct tttatcaact gcataatcaa tcaaaattac
    62461 cgaaatttca tgcataatca cataaatcac ttttgcttat cttgtgtcag atttttttat
    62521 ctccttatgg attttaggca aaaacagtag catgaaacgt cattaccaat taaggcagta
    62581 taaaatgctg gttttctcgt cagttcaagg taggataagg gttaacacgc ctttatgaca
    62641 gtcaggaatt gactgtttct ctaacgactt cccttttagc cttaaagata aaattcattt
    62701 taatttcagt tacttaataa agaattttgc gctaaagcac atttctgtac caataagctt
    62761 gccatttgac ctgtatcagc tttcccgata agttggaaat ccgctggaag ctttctggat
    62821 gagcagcctg ctcatcatat ttatgcagta attgagatcc cctcttcacc gtattaaccg
    62881 atgcgaaaag gacaacaagg gggcgaatac gaggcgcgcg tatgacacgc aacccccgtc
    62941 gccacgctct ttctgtgccc gtgcgcagcg gttcggaagt ggggttcccg cagagcctgg
    63001 gggaggttca cgatatgttg tacgataaat cccttgagag ggataactgt ggtttcggcc
    63061 tgatcgccca catagaaggc gaacctagcc acaaggtagt gcgtactgca atacacgcac
    63121 tggcccgcat gcagcaccgt ggcgcgattc tcgccgatgg taaaaccggt gacggttgcg
    63181 gcttgctgtt acaaaaaccg gatcgctttt ttcgcatcgt tgcgcaggag cgcggctggc
    63241 gtttagcaaa aaactacgct gtcgggatgc tcttcctgaa taaagatcct gaactcgcgg
    63301 ctgccgcacg ccgcatcgtt gaagaagagc tgcaacgcga aaccttgtcg attgtgggct
    63361 ggcgtgatgt ccccactaac gaaggcgtgc tgggtgaaat cgccctctcc tctctgcccc
    63421 gcattgagca aattttcgtt aacgctccgg caggctggcg tccgcgggat atggagcgcc
    63481 gtctgtttat cgcccgccgc cgcattgaaa agcgtctcga agccgacaaa gacttctacg
    63541 tctgtagcct gtcgaatctg gtgaacatct ataaaggtct gtgtatgccg gcggatctgc
    63601 cgcgctttta tctggatctt gcggacctgc gtctggaatc ggccatctgc ctgttccacc
    63661 agcgcttctc cactaacacc gtaccgcgct ggccgctggc gcagccgttc cgctacctgg
    63721 cgcataacgg tgaaatcaac accatcaccg gtaaccgcca atgggcgcgt gcgcgtacct
    63781 ataaattcca gacgccgctt atccctgatc tgcacgacgc cgcaccgttc gtcaacgaaa
    63841 ccggctctga ctccagttcg atggataaca tgctggaact gctgctggca ggcgggatgg
    63901 atatcatccg cgccatgcgt ctgttagtgc cacccgcctg gcagaacaac ccggatatgg
    63961 acccggaact gcgtgccttc tttgacttta actccatgca tatggagccg tgggatggcc
    64021 cggcgggcat cgtgatgtcc gacggtcgtt ttgccgcctg taacctcgac cgtaacggtc
    64081 tgcgtccggc gcgctacgtc atcaccaaag ataagctcat cacctgcgcc tctgaagtcg
    64141 gtatctggga ttaccagcct gacgaagtgg tcgaaaaagg ccgcgtcggg ccaggcgaac
    64201 tgatggttat cgacacccgc agtgggcgta ttctgcactc ggcagaaacc gatgacgatc
    64261 tgaaaagccg ccatccatat aaagagtgga tggagaaaaa cgtccgccga ctggtaccgt
    64321 ttgaagatct gcccgatgaa gaagtgggta gccgcgaatt ggacgacgac acgcttgcca
    64381 gctaccagaa acagtttaac tacagtgcgg aagagctgga ctccgtaatt cgcgtactgg
    64441 gcgaaaacgg tcaggaagcg gtcggttcga tgggcgatga taccccattc gccgtgctct
    64501 ccagtcagcc gcgcattatt tacgactact tccgccagca gtttgcccag gtgactaacc
    64561 cgccaatcga cccgctgcgt gaagcgcatg ttatgtcgct cgccaccagt atcggtcgtg
    64621 aaatgaacgt cttttgcgaa gcagagggcc aggcgcaccg tttaagcttt aaatcgccga
    64681 ttctgctcta ctccgatttc aaacagctca cgacgatgaa agaggagcac taccgcgcag
    64741 atacgctgga tatcaccttt gacgtcacta aaaccacgct cgaagcgaca gtcaaagagc
    64801 tgtgcgacaa agccgaaaaa atggtacgta gcggcaccgt gctgctggtg ctctccgacc
    64861 ggaatatcgc taaagatcgc ctgccggttc cagccccgat ggcggttggc gcgatccaga
    64921 cccgtctggt cgatcaaagc ctgcgttgcg atgccaacat catcgtcgaa accgccagcg
    64981 cccgcgatcc gcaccacttc gccgtgttgc tgggcttcgg cgcgacggct atttatccat
    65041 accttgccta tgaaacgctg ggccgcctgg ttgacaccca tgcgattgcc aaagattatc
    65101 gtaccgtgat gctcaactac cgtaacggca tcaacaaagg cttgtacaaa atcatgtcca
    65161 aaatgggcat ctccaccatc gcctcttacc gctgctcgaa actgtttgaa gcggtcggtc
    65221 tgcacgatga tgtagtgggc ctgtgcttcc agggggcggt cagccgcatt ggtggggcga
    65281 gctttgaaga cttccagcag gatctgctga acctgtcgaa acgtgcctgg ctggcgcgta
    65341 agcccatcag ccagggcggc ctgctgaaat acgtccacgg cggcgaatac cacgcttaca
    65401 acccggacgt ggtgcgcacg ctgcaacagg cggtacaaag cggcgagtac agcgactatc
    65461 aggaatacgc gaagctggtt aatgagcgtc cggcaaccac gctgcgcgat ctgctggcaa
    65521 ttacgccggg tgaaaacgcg gtcaacattg ctgatgttga accggcaagc gaactgttta
    65581 aacgctttga taccgccgcg atgtctatcg gcgcgttaag cccggaagcc cacgaggcgc
    65641 tggcggaagc gatgaatagc atcggcggta actcgaactc cggtgaaggc ggcgaagacc
    65701 cggcgcgcta tggcactaac aaagtgtcgc gcatcaagca ggtggcttct ggtcgcttcg
    65761 gcgttactcc ggcgtatctg gtcaatgccg acgtcattca gattaaagtc gcccagggcg
    65821 cgaagccggg cgaaggcggt cagttgccgg gcgacaaagt cactccttac atcgccaaac
    65881 tgcgctattc ggtgcccgga gtgacgctga tctccccgcc gccgcaccac gatatctact
    65941 ctatcgagga cttagcgcag ctcattttcg acctcaagca ggttaacccg aaagcgatga
    66001 tctccgtgaa gctggtttcc gaaccgggcg taggcaccat cgcgactggc gtggcaaaag
    66061 cttatgccga tttaatcacc atcgcaggct atgacggtgg caccggcgca agcccgctgt
    66121 cgtcagtgaa atacgcaggt tgcccgtggg agctggggct tgttgaaacc cagcaggcgc
    66181 tggttgccaa tggtctgcgt cataagatcc gtttgcaggt cgatggcggc ctgaaaaccg
    66241 gtgttgatat catcaaagcg gcgattctcg gcgcagaaag cttcggcttc ggcactggtc
    66301 caatggtcgc gctcggctgt aaatatctgc gtatttgcca cctgaacaac tgcgcaacgg
    66361 gtgtggcaac tcaggatgac aaactgcgta agaatcacta tcacggcctg ccgttcaagg
    66421 tgacgaatta ctttgagttt atcgcccgtg aaacccgcga gctgatggca cagctggggg
    66481 taacgcggct ggtggatctg attggtcgca ccgacctgct gaaagagctg gacggtttca
    66541 ccgccaaaca gcagaaactg gcgctgtcga agctgctgga gaccgccgaa ccgcatccag
    66601 gtaaggcact ctactgcacc gaaaacaacc cgccgtttga taacggcctg ctgaacgcgc
    66661 agttgctgca acaggcgaaa ccgtttgtcg atgaacgcca gagcaaaacc ttctggttcg
    66721 atatccgcaa taccgatcgc tccgtgggcg cgtcgctttc aggctatatc gcccagacgc
    66781 acggcgatca ggggctggca gccgatccta tcaaagcgta cttcaacggc accgcaggcc
    66841 agagtttcgg tgtatggaac gcgggcggcg tggaactgta cctgaccggg gatgccaacg
    66901 actatgtcgg taaaggcatg gcgggcggct taatcgccat tcgtcctccg gttggttccg
    66961 ccttccgcag ccatgaagca agtattatcg gcaacacctg cctgtatggc gcgaccggtg
    67021 gtcgtctgta tgccgcaggc cgcgcgggtg aacgtttcgg cgtgcggaac tccggtgcta
    67081 tcaccgtggt agaaggcatt ggcgacaacg gctgtgaata tatgacgggc ggtattgtct
    67141 gtattctggg taaaaccggc gttaacttcg gtgcgggcat gaccggcggc ttcgcttacg
    67201 ttctcgatga aagcggtgat ttccgcaaac gcgttaaccc ggaactggtc gaggtcttaa
    67261 acgttgacga tctggcgatc catgaagagc atctgcgcgg tcttatcacc gagcatgttc
    67321 agcatactgg ctctcagcgc ggtgaagaga ttctggcgaa ctggtcaacc ttcgccacta
    67381 aatttgcgct ggttaaaccg aagtccagtg atgtaaaagc actgctgggt caccgtagtc
    67441 gtagcgcagc agagttgcgc gtgcaggcgc agtaaggggt agcaacaatg agtcagaatg
    67501 tttatcaatt tatcgacctg cagcgcgttg atccgcctaa gaaaccgctg aagatccgca
    67561 aaattgagtt tgttgaaatt tacgagcagt tttccgaagg ccaggccaaa gcgcaggctg
    67621 accgctgcct gtcgtgcggc aacccatact gcgagtggaa atgtccggta cacaactaca
    67681 tcccgaactg gctgaagctc gccaacgagg ggcgtatttt tgaagcggcg gaactgtcgc
    67741 accagaccaa caccctgccg gaagtttgcg gacgagtctg cccgcaagac cgtctgtgcg
    67801 aaggttcctg cactctgaac gatgagtttg gcgcggtgac catcggcaac attgagcgtt
    67861 atatcaatga taaagcgttc gaaatgggct ggcgtccgga tatgtccggc gtgaagcaaa
    67921 ccggtaaaaa agtggcgatt atcggcgcag gcccggcagg tctggcgtgt gcggatgtcc
    67981 tgacgcgtaa cggcgtaaaa gccgttgtct tcgaccgtca tccagaaatt ggcgggctgc
    68041 tgaccttcgg tattccggcc ttcaagctgg aaaaagaggt aatgacgcgt cgccgtgaaa
    68101 tcttcaccgg catgggtatt gaattcaaac tcaataccga agtgggccgc gacgtgcagc
    68161 tggacgatct gctgagtgat tacgatgccg tcttccttgg cgtcgggact tatcagtcaa
    68221 tgcgcggcgg tctggaaaac aaagacgccg atggcgtgta cgcagcgctg ccgttcctta
    68281 tcgccaacac caaacagtta atgggctttg gtgaaacccg cgacgaaccg ttcgtcagca
    68341 tggaaggcaa acgcgtggtg gtccttggcg gtggcgacac tgcgatggac tgcgtgcgta
    68401 cgtccgtgcg ccagggagcg aagcacgtta cctgtgccta tcgtcgtgat gaagagaaca
    68461 tgccgggttc ccgccgcgaa gtgaaaaacg cgcgggaaga aggcgtagag ttcaaattca
    68521 acgtccagcc actggggatt gaagtgaacg gtaacggcaa agtcagcggc gtaaaaatgg
    68581 tacgtaccga aatgggcgaa ccggatgcca aaggccgtcg ccgcgcggag atcgttgcag
    68641 gttccgaaca tatcgttccg gcagatgcag tgatcatggc gtttggtttc cgtccacaca
    68701 acatggaatg gctggcaaaa cacagcgtcg agctggattc acaaggccgc atcatcgccc
    68761 cggaaggcag cgacaacgcc ttccagacca gcaacccgaa aatctttgct ggcggcgata
    68821 tcgtccgtgg ttccgatctg gtggtaaccg ctattgccga aggtcgtaag gcggcagacg
    68881 gtattatgaa ctggctggaa gtttaagctc tgtcccagcg ccgcctcctc agaaaagagt
    68941 cggcgctgaa attctccttt ctttctggaa agcgcctcgc ataatctgaa gaaaaccaat
    69001 gtaatacgct catctggatt gttaccggta gatgcccggc gtatagctga ttccattatt
    69061 caacgcagcg ccatataaag ggacagataa tggaatcgct ctcagagaga acctcaacag
    69121 gctaccagca aatccacgac ggtattattc acctggtcga tagcgcccgg acggaaacgg
    69181 tacgtagcgt taacgcgctg atgaccgcga catactggga aattggccga cgaattgtcg
    69241 aatttgaaca aggtggcgag gcaagggctg cgtatggtgc gcagctaatc aagcgactat
    69301 caaaggattt aagtctaagg tataagcgtg ggttctctgc aaaaaactta cgccaaatga
    69361 ggctttttta cctctttttt caacatgttg aaattcgcca gacagtgtct ggcgaattaa
    69421 caccattggg aattccgcag acaccatctg cagaattccc atcggcaaag atttggcaga
    69481 cgctgtctgc caaattgaga ggctgtttga tatttccaca gcttttgtat tgcatctcct
    69541 attttcggtt tgtatattca tgcaaataaa cgaaggaaag ttgccatgat ttacattgaa
    69601 cagcttgaat taatccataa aagtggtgat gtgttgtatc cagtaaaaat aaccagaaaa
    69661 tcatcaggaa aaactgcctt ccatcttgtt ccattcggct taaataagac tcacgacctt
    69721 ctagaggtgg aagatgcttc agaagcaatt cggctggtga ttgatgaacg tcattccatt
    69781 cgctgcagta cacttacagc aactattacg aataaaaagg gcaagcgaat taagcggaca
    69841 ggtatataca gtatcaa
//
LOCUS       DADMJE010000004        68830 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.004, whole genome shotgun sequence.
ACCESSION   DADMJE010000004 DADMJE010000000
VERSION     DADMJE010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 68830)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 68830)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..68830
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.004"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..418)
                     /gene="yeeE"
                     /locus_tag="JN001_000232"
     CDS             complement(<1..418)
                     /gene="yeeE"
                     /locus_tag="JN001_000232"
                     /inference="COORDINATES: protein motif:HMM:NF016064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY9051578.1"
                     /translation="MTYEAGAFPWPGTVIGGYIFGLGIVLAGGCATGTWYRAGEGLIG
                     SWIALFTYMVMSAVMRSPHASGLNQTLQHYSTEHNSIAETFNLSVWPLVAVLLVITLW
                     VVMKELKKPKLKVATLPPRRTGIAHILFEKRWHPFVT"
     gene            complement(428..610)
                     /locus_tag="JN001_000233"
     CDS             complement(428..610)
                     /locus_tag="JN001_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001467426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeeE/YedE family protein"
                     /protein_id="HAY9051579.1"
                     /translation="MFSMILSGLICGALLGFVMQRGRFCLTGGFRDMYIAKNNRMFYA
                     LLIAISVQSVGVFALI"
     gene            complement(789..2147)
                     /gene="plaP"
                     /locus_tag="JN001_000234"
     CDS             complement(789..2147)
                     /gene="plaP"
                     /locus_tag="JN001_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PlaP"
                     /protein_id="HAY9051580.1"
                     /translation="MSHNVTPNTSRVELRKTLTLVPVVMMGLAYMQPMTLFDTFGIVS
                     GLTDGHVPTAYAFALIAILFTALSYGKLVRRYPSAGSAYTYAQKSISPTVGFMVGWSS
                     LLDYLFAPMINILLAKIYFEALVPSIPSWMFVVALVAFMTAFNLRSLKSVANFNTVIV
                     VLQVVLIAVILGMVVYGVFEGEGAGTLASTRPFWSGDAHVIPMITGATILCFSFTGFD
                     GISNLSEETKDAERVIPRAIFLTALIGGMIFIFATYFLQLYFPDISRFKDPDASQPEI
                     MLYVAGKAFQVGALIFSTITVLASGMAAHAGVARLMYVMGRDGVFPKSFFGYVHPKWR
                     TPAMNIILVGAIALLAINFDLVMATALINFGALVAFTFVNLSVISQFWIREKRNKTLK
                     DHFQYLFLPMCGALTVGALWVNLEESSMVLGLIWAAIGLIYLACVTKSFRNPVPQYED
                     VA"
     gene            complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="JN001_000235"
     CDS             complement(2137..2199)
                     /gene="yoeI"
                     /locus_tag="JN001_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YoeI"
                     /protein_id="HAY9051581.1"
                     /translation="MGQFFAYATVITVKENDHVA"
     gene            complement(2414..3343)
                     /locus_tag="JN001_000236"
     CDS             complement(2414..3343)
                     /locus_tag="JN001_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416519.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9051582.1"
                     /translation="MKPLLDVLMILDALEKEGSFAAASAKLYKTPSALSYTVHKLESD
                     LNIQLLDRSGHRAKFTRTGKMLLEKGREVLHTVRELEKQAIKLHEGWENELVIGVDDT
                     FPFSLLAPLIEAFYQHHSVTRLKFINGVLGGSWDALTQGRADIIVGAMHEPPSSSEFG
                     FSRLGDLEQVFAVAPHHPLALEEEPLNRRIIKRYRAIVVGDTAQAGASTASQLLDEQE
                     AITVFDFKTKLELQISGLGCGYLPRYLAQHFLDSGALIEKKVVAQTLFEPVWIGWNEQ
                     TAGLASGWWRDEILANSAIAGVYAKSDDGKSAI"
     gene            complement(3389..4213)
                     /locus_tag="JN001_000237"
     CDS             complement(3389..4213)
                     /locus_tag="JN001_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9051583.1"
                     /translation="MKKVAIVGLGWLGMPLAMSLSARGWQVTGSKTTQDGVEAARMSG
                     IDSYLLRMEPELVCDSDDLDALMDADALVITLPARRSGSGDEFYLQAVQELVDSALAH
                     RIPRIIFTSSTSVYGDAQGMVKETTPRNPVTNSGRVLEELEDWLHNLPGTSVDILRLA
                     GLVGPGRHPGRFFAGKTAPDGEHGVNLVHLEDVIGAITLLLQAPKGGHIYNICAPAHP
                     ARNVFYPQMARLLGLEPPQFRNSLDSGKGKIIDGSRICNELGFEYQYPDPLVMPLE"
     gene            complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="JN001_000238"
                     /pseudo
     CDS             complement(4296..4550)
                     /gene="yoeB"
                     /locus_tag="JN001_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707909.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system mRNA interferase
                     toxin YoeB"
     gene            complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="JN001_000239"
     CDS             complement(4547..4798)
                     /gene="yefM"
                     /locus_tag="JN001_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoeB-YefM toxin-antitoxin system antitoxin YefM"
                     /protein_id="HAY9051584.1"
                     /translation="MRTISYSEARQNLSATMMKAVEDHAPILITRQNGEACVLMSLEE
                     YNSLEETAYLLRSPANARRLMDSIDSLKSGKGTEKDIIE"
     gene            5081..5131
                     /gene="hisL"
                     /locus_tag="JN001_000240"
     CDS             5081..5131
                     /gene="hisL"
                     /locus_tag="JN001_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="his operon leader peptide"
                     /protein_id="HAY9051585.1"
                     /translation="MTRVQFKHHHHHHHPD"
     gene            5277..6176
                     /gene="hisG"
                     /locus_tag="JN001_000241"
     CDS             5277..6176
                     /gene="hisG"
                     /locus_tag="JN001_000241"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HAY9051586.1"
                     /translation="MTDNTRLRIAMQKSGRLSDDSRELLARCGIKINLHTQRLIAMAE
                     NMPIDILRVRDDDIPGLVMDGVVDLGIIGENVLEEELLNRRAQGEDPRYFTLRRLDFG
                     GCRLSLATPVDEAWDGPLSLNGKRIATSYPHLLKRYLDQKGISFKSCLLNGSVEVAPR
                     AGLADAICDLVSTGATLEANGLREVEVIYRSKACLIQRDGEMEESKQQLIDKLLTRIQ
                     GVIQARESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWE
                     TMEKLKALGASSILVLPIEKMME"
     gene            6182..7486
                     /gene="hisD"
                     /locus_tag="JN001_000242"
     CDS             6182..7486
                     /gene="hisD"
                     /locus_tag="JN001_000242"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HAY9051587.1"
                     /translation="MSFNTIIDWNSCTAEQQRQLLMRPAISASESITRTVNDILDNVK
                     ARGDEALREYSAKFDKTTVTALKVSAEEIAAASERLSDELKQAMAVAVKNIETFHTAQ
                     KLPPVDVETQPGVRCQQVTRPVASVGLYIPGGSAPLFSTVLMLATPARIAGCKKVVLC
                     SPPPIADEILYAAQLCGVQDVFNVGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAK
                     RQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGPDSQVILLTPAAD
                     MARRVAEAVERQLAELPRAETARQALNASRLIVTKDLAQCVEISNQYGPEHLIIQTRN
                     ARDLVDGITSAGSVFLGDWSLESAGDYASGTNHVLPTYGYTATCSSLGLADFQKRMTV
                     QELSKEGFSALASTIETLAAAERLTAHKNAVTLRVNALKEQA"
     gene            7483..8553
                     /gene="hisC"
                     /locus_tag="JN001_000243"
     CDS             7483..8553
                     /gene="hisC"
                     /locus_tag="JN001_000243"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HAY9051588.1"
                     /translation="MSIVTITDLARENVRNLTPYQSARRLGGNGDVWLNANEYPTAVE
                     FQLTQQTLNRYPECQPKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDA
                     ILYCPPTYGMYGVSAETIGVECRTVPTLDNWQLDLQGISDKLEGVKVVYVCSPNNPTG
                     QLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAFAL
                     AGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAER
                     ECLIAALKEIPCVEQVFDSETNYILARFKASSAVFKSLWDQGIILRDQNKQPSLSGCL
                     RITVGTREESQRVIDALRAEQV"
     gene            8553..9620
                     /gene="hisB"
                     /locus_tag="JN001_000244"
     CDS             8553..9620
                     /gene="hisB"
                     /locus_tag="JN001_000244"
                     /EC_number="3.1.3.15"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     histidinol-phosphatase/imidazoleglycerol-phosphate
                     dehydratase HisB"
                     /protein_id="HAY9051589.1"
                     /translation="MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQ
                     KAGYKLVMITNQDGLGTQSFLQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECD
                     CRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGINGLRYDRETLNWPMIGE
                     QLTKRDRYAHVVRNTKETQIDVQVWLDREGGSKINTGVGFFDHMLDQIATHGGFRMEI
                     NVKGDLYIDDHHTVEDTGLALGEALKIALGDKRGICRFGFVLPMDECLARCALDISGR
                     PHLEYKAEFTYQRVGDLSTEMIEHFFRSLSYTMGVTLHLKTKGKNDHHRVESLFKAFG
                     RTLRQAIRVEGDTLPSSKGVL"
     gene            9620..10210
                     /gene="hisH"
                     /locus_tag="JN001_000245"
     CDS             9620..10210
                     /gene="hisH"
                     /locus_tag="JN001_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HAY9051590.1"
                     /translation="MNVVILDTGCANLNSVKSAIARHGYEPKVSRDPDVVLLADKLFL
                     PGVGTAQAAMDQVRERELFDLIKACTQPVLGICLGMQLLGRRSEESNGVDLLGIIDED
                     VPKMTDFGLPLPHMGWNRVYPQAGNRLFQGIEDGAYFYFVHSYAMPVNPWTIAQCNYG
                     EPFTAAVQKDNFYGVQFHPERSGAAGAKLLKNFLEM"
     gene            10210..10947
                     /gene="hisA"
                     /locus_tag="JN001_000246"
     CDS             10210..10947
                     /gene="hisA"
                     /locus_tag="JN001_000246"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310852.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HAY9051591.1"
                     /translation="MIIPALDLIDGTVVRLHQGDYGKQRDYGNDPLPRLQDYAAQGAE
                     VLHLVDLTGAKDPAKRQIPLIKTLVAGVNVPVQVGGGVRSEEDVAALLEAGVARVVVG
                     STAVKSPEMVKGWFERFGADALVLALDVRIDEQGNKQVAVSGWQENSGVSLEQLVETY
                     LPVGLKHVLCTDISRDGTLAGSNVSLYEEVCARYPQVAFQSSGGIGDINDVAALRGTG
                     VRGVIVGRALLEGKFTVKEAIACWQNA"
     gene            10929..11705
                     /gene="hisF"
                     /locus_tag="JN001_000247"
     CDS             10929..11705
                     /gene="hisF"
                     /locus_tag="JN001_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015853929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HAY9051592.1"
                     /translation="MLAKRIIPCLDVRDGQVVKGVQFRNHEIIGDIVPLAKRYAEEGA
                     DELVFYDITASSDGRVVDKSWVSRVAEVIDIPFCVAGGIKSLEDAAKILSFGADKISI
                     NSPALADPTLITRLADRFGVQCIVVGIDTWYDGETGKYHVNQYTGDESRTRVTQWETL
                     DWVQEVQKRGAGEIVLNMMNQDGVRNGYDLEQLKKVREVCHVPLIASGGAGTMEHFLE
                     AFRDADVDGALAASVFHKQIINIGELKAYLATQGVEIRIC"
     gene            11699..12310
                     /locus_tag="JN001_000248"
     CDS             11699..12310
                     /locus_tag="JN001_000248"
                     /EC_number="3.5.4.19"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphoribosyl-AMP
                     cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE"
                     /protein_id="HAY9051593.1"
                     /translation="MLTEQQRRELDWEKTDGLMPVIVQHAVSGEVLMLGYMNPEALDK
                     TIESGKVTFFSRTKQRLWTKGETSGNFLNVVNIAPDCDNDTLLVLANPIGPTCHKGTS
                     SCFGDTAHQWLFLYQLEQLLAERKSADPETSYTAKLYASGTKRIAQKVGEEGVETALA
                     ATVHDRFELTNEASDLMYHLLVLLQDQDLDLTTVIENLRKRHQ"
     gene            complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="JN001_000249"
     CDS             complement(12407..13384)
                     /gene="wzzB"
                     /locus_tag="JN001_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310855.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen chain length determinant protein
                     WzzB"
                     /protein_id="HAY9051594.1"
                     /translation="MRVENNNVSGQNHDPEQIDLIDFLVQLWRGKMTIIISVIVAIAL
                     AIGYLAVAKEKWTSTAIVTQPDVGQIAGYTNAMNVIYGPAVPKVSDIQTSLIGRYSTA
                     FSALAETLDNQEEPEKLTIEPTVKNQSLPLAVSYVGETAEGAQKQLAQYIQQVDDQVN
                     EELEKDLKDNIALRMKNLQDSLKTQEVVAQEQKDLRIRQIQEALQYANQAQVTKPQVQ
                     QTEDVTQDTLFLLGSEALESMIKHEATRPLVFSSNYYQTRQNLLDIESLKVDDLDIHA
                     YRYVMKPTLPIRRDSPKKAITLILAVLLGGMVGAGIVLGRNALRNYNAK"
     gene            complement(13531..13623)
                     /locus_tag="JN001_000250"
                     /pseudo
     CDS             complement(13531..13623)
                     /locus_tag="JN001_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416532.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
     gene            13793..14797
                     /locus_tag="JN001_000251"
     CDS             13793..14797
                     /locus_tag="JN001_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015572392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase"
                     /protein_id="HAY9051595.1"
                     /translation="MKFLVTGAAGFIGFYVSKRLLAAGHQVVGIDNLNDYYDVNLKQA
                     RLDLLKHDNFSFYKIDLADREKMAALFADERFDRVINLAAQAGVRYSLENPNAYADAN
                     LIGFLNILEGCRHNNVQHLLYASSSSVYGMNRKMPFSTDDSVDHPVSLYAATKKANEL
                     MAHTYSHLYGLPTTGLRFFTVYGPWGRPDMALFKFTKAMLEGKSIDVYNFGKMKRDFT
                     YIDDIAEAIIRLQDVIPEKDPQWTVETGSPATSSAPYRVYNIGNSSPVELMDYINALE
                     EALGIEANKNMMPLQPGDVLETSADTKALYDVIGFKPETSVKEGVKNFVEWYRNFYKV
                     "
     gene            complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="JN001_000252"
     CDS             complement(14863..16029)
                     /gene="ugd"
                     /locus_tag="JN001_000252"
                     /EC_number="1.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005227854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 6-dehydrogenase"
                     /protein_id="HAY9051596.1"
                     /translation="MKITISGTGYVGLSNGILIAQNHEVVALDIVQAKVDMLNKKQSP
                     IVDKEIEEYLATKDLNFRATTDKYDAYKNADYVIIATPTDYDPKTNYFNTSSVEAVIR
                     DVTEINPNAVMIIKSTIPVGFTESIKERFGIENVIFSPEFLREGKALYDNLHPSRIVI
                     GEQSDRAERFAALLQEGAIKQDIPILFTDSTEAEAIKLFANTYLAMRVAYFNELDSYA
                     ESLGLNSRQIIEGVCLDPRIGNHYNNPSFGYGGYCLPKDTKQLLANYQSVPNNLISAI
                     VDANRTRKDFIADSILARKPKVVGVYRLIMKSGSDNFRASSIQGIMKRIKAKGVPVIV
                     YEPAMKEDDFFRSRVVRDLDAFKQEADVIISNRMSADLADVADKVYTRDLFGND"
     gene            complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="JN001_000253"
     CDS             complement(16278..17684)
                     /gene="gndA"
                     /locus_tag="JN001_000253"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HAY9051597.1"
                     /translation="MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSREKTEEVIA
                     ENPGKKLVPYYTVKEFVESLETPRRILLMVKAGAGTDAAIDSLKPYLDKGDIIIDGGN
                     TFFQDTIRRNRELSAEGFNFIGTGVSGGEEGALKGPSIMPGGQKEAYELVAPILTKIA
                     AVAEDGEPCVTYIGADGAGHYVKMVHNGIEYGDMQLIAEAYSLLKGGLNLSNEELAQT
                     FTEWNNGELSSYLIDITKDIFTKKDEDGNYLVDVILDEAANKGTGKWTSQSALDLGEP
                     LSLITESVFARYISSLKDQRVAASKVLSGPQAQPAGNKAEFIEKVRRALYLGKIVSYA
                     QGFSQLRAASEEYNWDLNYGEIAKIFRAGCIIRAQFLQKITDAYAENPQIANLLLAPY
                     FKQIADDYQQALRDVVAYAVQNGIPVPTFAAAVAYYDSYRAAVLPANLIQAQRDYFGA
                     HTYKRIDKDGVFHTEWLD"
     gene            complement(17753..18859)
                     /gene="glf"
                     /locus_tag="JN001_000254"
     CDS             complement(17753..18859)
                     /gene="glf"
                     /locus_tag="JN001_000254"
                     /EC_number="5.4.99.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactopyranose mutase"
                     /protein_id="HAY9051598.1"
                     /translation="MQYDFIIIGSGLFGAVCAYELNKRNKRVLVIEKRDHIGGNIYTE
                     KVDDIHIHKYGAHIFHTNDQYIWNYINKFASFNRFTNSPLAYHKGKLYNLPFNMNTFY
                     QLWGTKTPSEAQDKIDLQRSKYSNITPTNLEEQALSLVGEDVYEKLIKGYTEKQWGRS
                     CSELPPFIIKRIPVRFTFDNNYFTDRFQGVPIGGYTQIIDKMLNGVDLLLNVDYLSEK
                     DKYNSMAERIIYTGPIDAYFDKKLGTLEYRSLKFITKKIEEANYQGNAVINYTEKDIP
                     FTRIIEHKHFDDSYETEYTFITEEYPIEWSEGQEPYYPINDKKNMDIYHKYRELSQME
                     SKVIFGGRLAEYKYYDMHQVIRSALNCVNKILHD"
     gene            complement(18892..19422)
                     /gene="rfbC"
                     /locus_tag="JN001_000255"
     CDS             complement(18892..19422)
                     /gene="rfbC"
                     /locus_tag="JN001_000255"
                     /EC_number="5.1.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017490056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose 3,5-epimerase"
                     /protein_id="HAY9051599.1"
                     /translation="MKVQDTVLDGVKIIEPVVYGDNRGFFLEVYQKQRYQNLLNIEFD
                     FVQDNYSRSSKNVLRGLHFQKTKPQGKLVRVVRGEVFDVAVDIRKESPNYGQWIGVLL
                     SEMNKKQFWVPPGFAHGFVVLSEMADFEYKCTEYYDPEDECCLLWNDPELNIQWPLSN
                     PILSDKDMKGCLLKEL"
     gene            complement(19437..20606)
                     /locus_tag="JN001_000256"
     CDS             complement(19437..20606)
                     /locus_tag="JN001_000256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000340489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HAY9051600.1"
                     /translation="MDCLDEKDHLRDNHSLKIVLTANSSWYIYNFRRSTIKALINIGF
                     DVLVVVPDYEYKDSILKFGAKFEKVDLKPKSINIFTECTSLISYYKIIKKFNPQVILT
                     FTPKANIYCGLLAYKFDAKVIPNISGLGSAFVNSNTILSQIVKLLYKIALKKAAFVFF
                     QNEDDRQLLINSGCVNYEKTCRIFGSGVDLSKFLPSNKNLKQRSCVKFILVARLLYTK
                     GILHYLKAAEIIKSKYPNCSFSLLGAFEKNEKIITKELIEGFCTRGIVNYYGTSDDVA
                     SIMKHYDAIVLPSFYREGVPKALIEGASSGLAILTTDNVGCRDMVQNEVNGFLCQPND
                     LDSLVDIIEKYILLTDEMKNTMSIKSREFAESHCDENKIIEKYTNTINDVLNRNH"
     gene            complement(20569..21441)
                     /locus_tag="JN001_000257"
     CDS             complement(20569..21441)
                     /locus_tag="JN001_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HAY9051601.1"
                     /translation="MNRVAVIIVLYYPDVSKINKMIDSLGKKQCEILLVDNTPELHLE
                     SDVLCNNNIHYYHLGDNKGIAFAQNYGFIKAIGLGKSLFFTFDQDSCISKDYISSMLK
                     EYEYACSLRSNIAALGPTIINERNGKKYDREIKLGSQISETIHDVESIISSGALIPLE
                     AIINIGLNKVSWFIDLIDIEWSFRARKEGWNILVTDKVLISHNIGSKDINIMGIKTFT
                     VCSPFRLYYVYRNWLLALREPVFPLRYKLKKLITMPVRIIIYAFCERGGQRLNYIFKG
                     IKDGLLGRKGSFKG"
     gene            complement(22244..22876)
                     /locus_tag="JN001_000258"
     CDS             complement(22244..22876)
                     /locus_tag="JN001_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase-like hydrolase"
                     /protein_id="HAY9051602.1"
                     /translation="MLEHIVVFDVCGTLYLSNTTFDYVVFVHRKQKKYTKLIKCLLLR
                     SLFGKLLHKLRICSLRKHFLKTLEGYEKSTLEELANLFYDEFLIFKEKNEVMALLERY
                     KHEKIILMSASVDPVINVIAKNLNVEAVSSKLEFIDNKSTGLLEYNLTGIKHLQVNNP
                     VSLIVTDNFSDINLIKLADTAVIISKAKDKNKWRVLLNRFGVSKDKVRFM"
     gene            complement(22878..24059)
                     /locus_tag="JN001_000259"
     CDS             complement(22878..24059)
                     /locus_tag="JN001_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001564252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligosaccharide repeat unit polymerase"
                     /protein_id="HAY9051603.1"
                     /translation="MTIFIAIIMLMYSGLLLSINKDIKSPSAILFFIWGGLLFLSGVN
                     GDITNYTLCIILFSCLSFSVGALLAKPYAPIFEHVFSYNINNTKALVLITNIISFVIL
                     IYTLIVFLYYYKGGFTESYINSRTEINYGDKSGLIKIYGYIYYLLYPLVYVWSFLYFK
                     NKYKKIEEGERARLPYNNRTFYFVFFTSLFYALLSTAKIKVLLLIIPIVFLRLFFSKI
                     SLKYLLVTVSGIIFFFYLSMLFLNKIDDSSGAFEALKYGLMNYSLANIFALDSVLQGK
                     AVVIDCNGDATCGLANFISYKEYKTNVFTIFYSLTKYSDFLYSLIFFFVIGFFHSSLY
                     NVAKKNKKTISVVICSILYFPLLFQFFDQLYMLMFYIYAIAMLYVICFCSRLTLTLKG
                     V"
     gene            complement(24062..24826)
                     /locus_tag="JN001_000260"
     CDS             complement(24062..24826)
                     /locus_tag="JN001_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001533039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4422 domain-containing protein"
                     /protein_id="HAY9051604.1"
                     /translation="MALFIACHKQTELPNHECYIPIHAGKKISGKMLDQVLGDDTGNN
                     ISCKNKNYCELTVIYWLWKNKLFNDDYIGLVHYRRYFGNVLSNFKFKEVRIYDRANIS
                     NKMKQYDIIIPVKESLKLSVVEHYRKFHNVEDLMLAKKIVDKLYPDYSVAFRELLEQK
                     KISLYNMFIMKAGIFDCYCDWLFSILDELEKEINLCRYDEYQSRVFGFIAERLLNVWI
                     NKNKEVFKVGEEFVINTDECSGRGAQLISQLRAKLK"
     gene            complement(24839..26086)
                     /locus_tag="JN001_000261"
     CDS             complement(24839..26086)
                     /locus_tag="JN001_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_050009647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase"
                     /protein_id="HAY9051605.1"
                     /translation="MKLVTSLNKNIFYLAILQGSYFILPLLTFPYLVRVLGPYSFGLL
                     GFCQATMQYLVMVTDYGFNWSATQDVSKSKNDKEKLTTIFWNVFFSKIILALSAIVIF
                     FGITFFIKELYYAQVVLISFIPMVLGNILYPVWFFQGLEKMKWITLCSLSARLLLIPL
                     TFLLVKNPQDIWLAALIQGGVNFIAGLIGFAIIINNNWIGKLVFDYDGIIYSLKSGWH
                     IFISTAAISLYTTTTVVVLGFICGPVSVGYFNAANTIRNAAQSLMNPIYQAVYPRINS
                     LFEENYAKSMNLLKKSFKGVLFISFSGSLLLCILSPIIIRYGVGDKYTESISILRILA
                     FLPFIISLSNFFGIQTMLTHGYKRQFSKILLICGVMHVIIIAPLIFFAGAYGAAMTVL
                     ITETVVASLMYLFLKRKKINLFK"
     gene            complement(26129..27013)
                     /gene="rfbA"
                     /locus_tag="JN001_000262"
     CDS             complement(26129..27013)
                     /gene="rfbA"
                     /locus_tag="JN001_000262"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000857538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY9051606.1"
                     /translation="MKTRKGIILAGGSGTRLYPVTMAVSKQLLPIYDKPMIYYPLSTL
                     MLAGIRDILIISTPQDTPRFQQLLGDGSQWGLNLQYKVQPTPDGLAQAFIIGEEFIGG
                     DDCALVLGDNIFYGHDLPKLMDTAVDKESGATVFAYHVNDPERYGVVEFDKNGTAISL
                     EEKPLQPKSNYAVTGLYFYDNDVVEMAKNLKPSARGELEITDINRIYMEQGRLSVAMM
                     GRGYAWLDTGTHQSLIEASNFIATIEERQGLKVSCPEEIAYRKGFIDSEQVKILAEPL
                     KKNAYGQYLLNIINNKIS"
     gene            complement(27071..27970)
                     /gene="rfbD"
                     /locus_tag="JN001_000263"
     CDS             complement(27071..27970)
                     /gene="rfbD"
                     /locus_tag="JN001_000263"
                     /EC_number="1.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-dehydrorhamnose reductase"
                     /protein_id="HAY9051607.1"
                     /translation="MNILLFGKTGQVGWELQRALAPLGNLIALDVHSTDYCGDFSNPE
                     GVAETVKKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVESIAKAANEVGAWVIHY
                     STDYVFPGTGEIPWLETDATAPLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGN
                     NFAKTMLRLAKEREELAVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGMYHLVAS
                     GTTTWHDYAALVFEEARKAGIPLALNKLNAVPATAYPTPARRPHNSRLNTEKFQQNFA
                     LVLPDWQVGVKRMLNELFTTTAI"
     gene            complement(27970..29055)
                     /gene="rfbB"
                     /locus_tag="JN001_000264"
     CDS             complement(27970..29055)
                     /gene="rfbB"
                     /locus_tag="JN001_000264"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY9051608.1"
                     /translation="MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA
                     DVSDSERYVFEHADICDAAAMARIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIV
                     GTYVLLEAARNYWSALDGDKKNSFRFHHISTDEVYGDLPHPDEVNNKEQLPLFTETTA
                     YAPSSPYSASKASSDHLVRAWKRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEG
                     KALPIYGKGDQIRDWLYVEDHARALYIVVTEGKAGETYNIGGHNEKKNIDVVLTICDL
                     LDEIVPKEKSYREQITYVADRPGHDRRYAIDAEKISRELGWKPQETFESGIRKTVEWY
                     LANAKWVENVKSGAYQSWIEQNYEGRQ"
     gene            complement(29427..30320)
                     /gene="galF"
                     /locus_tag="JN001_000265"
     CDS             complement(29427..30320)
                     /gene="galF"
                     /locus_tag="JN001_000265"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalF"
                     /protein_id="HAY9051609.1"
                     /translation="MTNLKAVIPVAGLGMHMLPATKAIPKEMLPIVDKPMIQYIVDEI
                     VAAGIKEILLVTHASKNAVENHFDTSYELESLLEQRVKRQLLAEVQSICPPGVTIMNV
                     RQGEPLGLGHSILCARPAIGDNPFVVVLPDVVIDDASADPLRYNLAAMIARFNETGRS
                     QVLAKRMPGDLSEYSVIQTKEPLDREGKVSRIVEFIEKPDQPQTLDSDIMAVGRYVLS
                     ADIWPELERTQPGAWGRIQLTDAIAELAKKQSVDAMLMTGDSYDCGKKMGYMQAFVKY
                     GLRNLKEGAKFRKGIEKLLSE"
     gene            complement(30495..31889)
                     /gene="wcaM"
                     /locus_tag="JN001_000266"
     CDS             complement(30495..31889)
                     /gene="wcaM"
                     /locus_tag="JN001_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis protein WcaM"
                     /protein_id="HAY9051610.1"
                     /translation="MPFKKLSRRTFLTASSALAFLHTPFARALPARQSVNINDYNPHD
                     WIASFKQAFSEGQTVVVPGGLVCDNINTGIFIPAGKTLHILGSLRGNGRGRFVLQDGS
                     QVTGEEGGSMHNITLDVRGSDCTIKGLTMSGFGPVTQIYIGGKNKQVMRNLTIDNLTV
                     SHANYAILRQGFHNQIIGANITNCKFSDLQGDAIEWNVAINDSDILISDHVIERINCT
                     NGKINWGIGIGLAGSTYDNNYPEDQAVKNFVVANITGSDCRQLIHVENGKHFVIRNIK
                     ARNITPDFSKKAGIDNATVAIYGCDNFVIDNIEMINSAGMLIGYGVIKGKYLSIPQNF
                     RVNNIQLDNTHLAYKLRGIQISAGNAVSCVALTNIEMKRASLELHNKPQHLFMRNINV
                     MQESSVGPALSMNFDMRKDVRGVFMAKKETLLSLANVHAVNERGQSSVDIDRINHHIV
                     NVEKINFRLPERGE"
     gene            complement(31900..33120)
                     /gene="wcaL"
                     /locus_tag="JN001_000267"
     CDS             complement(31900..33120)
                     /gene="wcaL"
                     /locus_tag="JN001_000267"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaL"
                     /protein_id="HAY9051611.1"
                     /translation="MKVGFFLLKFPLSSETFVLNQITAFIDMGFEVEIVALQKGDTQN
                     THAAWTKYNLAARTRWLQDEPQGKVAKLRYRASQTLRGIHRKNTWQALNLKRYGAESR
                     NLILSAICGQVATPFHADVFIAHFGPAGVTAAKLRELDVIRGKIATIFHGIDISSREV
                     LNHYTPEYQQLFRRGDLMLPISELWAGRLQKMGCPREKIAVSRMGVDMTRFSPRPVKA
                     PATPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQ
                     LEDVVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVST
                     LHSGIPELVEADKSGWLVPENDARALAQRLAAFSQLDTDELTTVVKRAREKVEHDFNQ
                     QVINRELASLLQAL"
     gene            complement(33117..34397)
                     /gene="wcaK"
                     /locus_tag="JN001_000268"
     CDS             complement(33117..34397)
                     /gene="wcaK"
                     /locus_tag="JN001_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis pyruvyl transferase
                     WcaK"
                     /protein_id="HAY9051612.1"
                     /translation="MKLLILGNHTCGNRGDSAILRGLLDAINILNPHAEVDVMSRYPV
                     SSSWLLNRPVMGDPLFLQMKQHNSAAGVVGRVKKVLRRRYQHQVLLSRVTDTGKLRNI
                     AIAQGFTDFVRLLSGYDAIIQVGGSFFVDLYGVPQFEHALCTFMAKKPLFMIGHSVGP
                     FQDEQFNQLANYVFGHCDALILRESVSLDLMKRSNITTAKVENGVDTAWLVDHHIEDF
                     TASYAVQHWLDVAAQQKAVAITLRELAPFDKRLGTTQEAYEKAFAGVVNRILDEGYQV
                     IALSTCTGIDSYNKDDRMVALNLRQHISDPARYHVVMDELNDLEMGKILGACELTVGT
                     RLHSAIISMNFSTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQ
                     LPALNARLNEAVSRERQTGMRMVQSVLERIGEAK"
     gene            complement(34565..36043)
                     /gene="wzxC"
                     /locus_tag="JN001_000269"
     CDS             complement(34565..36043)
                     /gene="wzxC"
                     /locus_tag="JN001_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M-antigen undecaprenyl disphosphate flippase"
                     /protein_id="HAY9051613.1"
                     /translation="MSLREKTISGAKWSAIATVIIIGLGLVQMTVLARIIDNHQFGLL
                     TVSLVIIALADTLSDFGIANSIIQRKEISHLELTTLYWLNVGLGIVVCVAVFLLSDAI
                     GDVLNNPDLAPLIKTLSLAFVVIPHGQQFRALMQKELEFNKIGMIETSAVLAGFTFTV
                     VSAHFWPLAMTAILGYLVNSAVRTLLFGYFGRKIYRPGLHFSLASVAPNLRFGAWLTA
                     DSIINYLNTNLSTLVLARILGAGVAGGYNLAYNVAVVPPMKLNPIITRVLFPAFAKIQ
                     DDTEKLRVNFYKLLSVVGIINFPALLGLMVVSNNFVPLVFGEKWNSIIPVLQLLCIVG
                     LLRSVGNPIGSLLMAKARVDISFKFNVFKTFLFIPAIVIGGQMAGAIGVTLGFLLVQI
                     INTILSYFVMIKPVLGSSYRQYILSLWLPFYLSLPTLVVSYALGIVLKGQLALGMLLA
                     VQIIAGVLAFVVMIVLSRHPLVVEVKRQFCRSEKMKMLLRAG"
     gene            complement(36045..37439)
                     /gene="wcaJ"
                     /locus_tag="JN001_000270"
     CDS             complement(36045..37439)
                     /gene="wcaJ"
                     /locus_tag="JN001_000270"
                     /EC_number="2.7.8.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate glucose
                     phosphotransferase"
                     /protein_id="HAY9051614.1"
                     /translation="MTNLKKRERAKTNASLISMVQRFSDITIMFAGLWLVCEVSGLSF
                     LYMHLLVALITLVVFQMLGGITDFYRSWRGVRAATEFALLLQNWTLSVIFSAGLVAFN
                     NDFDTQLKIWLAWYGLTSIGLVVCRSCIRIGAGWLRNHGYNKRMVAVAGDLAAGQMLM
                     ESFRNQPWLGFEVVGVYHDPKPGGVSNDWAGNLQQLVEDAKAGKIHNVYIAMQMCDGA
                     RVKKLVHQLADTTCSVLLIPDVFTFNILHSRLEEMNGVPVVPLYDTPLSGVNRLLKRA
                     EDIVLATLILLLISPVLCCIALAVKLSSPGPVIFRQTRYGMDGKPIKVWKFRSMKVME
                     NDKVVTQATQNDPRVTKVGNFLRRTSLDELPQFINVLTGGMSIVGPRPHAVAHNEQYR
                     QLIEGYMLRHKVKPGITGWAQINGWRGETDTLEKMEKRVEFDLEYIREWSVWFDIKIV
                     FLTVFKGFVNKAAY"
     gene            complement(37494..38864)
                     /gene="cpsG"
                     /locus_tag="JN001_000271"
     CDS             complement(37494..38864)
                     /gene="cpsG"
                     /locus_tag="JN001_000271"
                     /EC_number="5.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase CpsG"
                     /protein_id="HAY9051615.1"
                     /translation="MKKLTCFKAYDIRGKLGEELNEDIAWRIGRAYGEFLKPKTIVLG
                     GDVRLTSETLKLALARGLQDAGVDVLDIGMSGTEEIYFATFHLGVDGGIEVTASHNPM
                     DYNGMKLVREGARPISGDTGLRDVQRLAEANDFPPVDETKRGRYQQINLRDAYVDHLF
                     GYINVKNLTPLKLVINSGNGAAGPVVDAIEARFKALGAPVELIKVHNTPDGNFPNGIP
                     NPLLPECRDDTRNAVIKHGADMGIAFDGDFDRCFLFDEKGQFIEGYYIVGLLAEAFLE
                     KNPGAKIIHDPRLSWNTIDVVTAAGGTPVMSKTGHAFIKERMRKEDAIYGGEMSAHHY
                     FRDFAYCDSGMIPWLLVAELVCLKGKTLGELVRDRMAAFPASGEINSKLAQPVEAINR
                     VEQHFSREALSVDRTDGISMTFADWRFNLRTSNTEPVVRLNVESRGDVPLMEARTRTL
                     LTLLNE"
     gene            complement(39057..40493)
                     /gene="cpsB"
                     /locus_tag="JN001_000272"
     CDS             complement(39057..40493)
                     /gene="cpsB"
                     /locus_tag="JN001_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate guanyltransferase"
                     /protein_id="HAY9051616.1"
                     /translation="MAQSKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTT
                     ICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
                     KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGY
                     IRRGEVSAGEQDTVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELK
                     KYRPDILDACEQAMSAVDPDLDFIRVDEEAFLACPEESVDYAVMERTADAVVVPMDAG
                     WSDVGSWSSLWEISAHTAEGNVCHGDVINHKTENSYVYAESGLVTTVGVKDLVVVQTK
                     DAVLIADRNAVQDVKKVVEQIKADGRHEHRVHREVYRPWGKYDSIDAGDRYQVKRITV
                     KPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKI
                     PLDLIEVRSGSYLEEDDVVRFADRYGRV"
     gene            complement(40496..41719)
                     /gene="wcaI"
                     /locus_tag="JN001_000273"
     CDS             complement(40496..41719)
                     /gene="wcaI"
                     /locus_tag="JN001_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis fucosyltransferase
                     WcaI"
                     /protein_id="HAY9051617.1"
                     /translation="MKILVYGINYSPELTGIGKYTGEMVEWLAAQGHEVRVITAPPYY
                     PQWQVGENYSAWRYKREEGAATVWRCPLYVPKQPSTLKRLLHLGSFAVSSFFPLMAQR
                     RWKPDRIIGVVPTLFCTPGMRLLAKLSGARTVLHIQDYEVDAMLGLGLAGKGKGGKVA
                     QLATAFERSGLHNVDNVSTISRSMMNKAIEKGVAAENVIFFPNWSEIARFQHVADADV
                     DALRNQLDLPDNKKIILYSGNIGEKQGLENVIEAADRLRDEPLIFAIVGQGGGKARLE
                     KMAQQRGLRNMQFFPLQSYDALPALLKMGDCHLVVQKRGAADAVLPSKLTNILAVGGN
                     AVITAEAHTELGQLCETFPGIAVCVEPESVEALVAGIRQALLLPKHNTVAREYAERTL
                     DKENVLRQFINDIRG"
     gene            complement(41716..42195)
                     /locus_tag="JN001_000274"
     CDS             complement(41716..42195)
                     /locus_tag="JN001_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose mannosyl hydrolase"
                     /protein_id="HAY9051618.1"
                     /translation="MFLRQEDFATVVRSTPLVSLDFIVENSRGEFLLGKRTNRPAQGY
                     WFVPGGRVQKDETLEAAFERLTMAELGLRLPITAGQFYGVWQHFYDDNFSGTDFTTHY
                     VVLGFRFRVAEEELLMPDEQHDDYRWLTPDALLASNDVHANSRAYFLAEKRAGVPGL"
     gene            complement(42195..43163)
                     /gene="fcl"
                     /locus_tag="JN001_000275"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
     CDS             complement(42195..43163)
                     /gene="fcl"
                     /locus_tag="JN001_000275"
                     /gene_synonym="wcaG"
                     /gene_synonym="yefB"
                     /EC_number="1.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-L-fucose synthase"
                     /protein_id="HAY9051619.1"
                     /translation="MSRQRIFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDS
                     RAVHDFFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKL
                     LFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRS
                     VMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQNAPDVVVWGSGTPMREFLHVDDMA
                     AASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK
                     PDGTPRKLLDVTRLHQLGWYHEISLEAGLASTYQWFLENQDRFRGE"
     gene            complement(43166..44287)
                     /gene="gmd"
                     /locus_tag="JN001_000276"
     CDS             complement(43166..44287)
                     /gene="gmd"
                     /locus_tag="JN001_000276"
                     /EC_number="4.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose 4,6-dehydratase"
                     /protein_id="HAY9051620.1"
                     /translation="MSKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERV
                     DHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYT
                     ADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVA
                     KLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYL
                     GNMDSLRDWGHAKDYVKMQWMMLQQEQPEDFVIATGVQYSVRQFVEMAAAQLGIKLRF
                     EGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVETLLGDPTKAHEKLGWK
                     PEITLREMVSEMVANDLEAAKKHSLLKSHGYDVAIALES"
     gene            complement(44314..44862)
                     /gene="wcaF"
                     /locus_tag="JN001_000277"
     CDS             complement(44314..44862)
                     /gene="wcaF"
                     /locus_tag="JN001_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaF"
                     /protein_id="HAY9051621.1"
                     /translation="MQDLSGFSVPKGFRGGNAIKVQLWWAVQATIFAWSPQVLYRWRA
                     FLLRLFGAKIGKNVVIRPSVKITYPWKLTLGDYAWVGDDVNLYTLGEITIGAHSVISQ
                     KSYLCTGSHDHASQHFTINATPIVIGEKCWLATDVFVAPGVTIGDGTVVGARSSVFKT
                     LPANVVCRGNPAVVIRERVETE"
     gene            complement(44878..45624)
                     /gene="wcaE"
                     /locus_tag="JN001_000278"
     CDS             complement(44878..45624)
                     /gene="wcaE"
                     /locus_tag="JN001_000278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaE"
                     /protein_id="HAY9051622.1"
                     /translation="MLLSIITVAFRNLEGIVKTHASLAHLAQAEDISFEWIVVDGGSN
                     DGTREYLENLNGIYNLRFVSEPDNGIYDAMNKGITMAQGKFALFLNSGDIFHQDAANF
                     VRKLKMQKDNMMITGDALLDFGDGHKIKRSAKPGWYIYHSLPASHQAIFFPVSGLKKW
                     RYDLEYKVSSDYALAAKMYKAGYAFKKLNGLVSEFSMGGVSTTNNMELCADAKKVQRQ
                     ILHVPGFWAELSWHLRQRTTSKTKALYNKV"
     gene            complement(45635..46852)
                     /gene="wcaD"
                     /locus_tag="JN001_000279"
     CDS             complement(45635..46852)
                     /gene="wcaD"
                     /locus_tag="JN001_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative colanic acid polymerase WcaD"
                     /protein_id="HAY9051623.1"
                     /translation="MSTSIRICSYLLLPLIYLLVNVKIAQLGESFPITIVTFLPVLLL
                     LFLERISVKKLMIALGIGAGLTAFNYLFGQSLDASKYVTSTMLFVYIVIIIGMVWSIR
                     FKTISPHNHRKILRFFYLVVGLVVALAVVEMAQIILTGGSSIMESISKYLIYSNSYVL
                     NFIKFGGKRTTALYFEPAFFALALISIWLSIKQFGIKTPKTDAMILAGIILSGSFSGV
                     MTFILFYLLEWAFQYLNKEAIKKKLPLALISLAVFLVGVVIAFPYISTRLGDLGTEGS
                     SSYYRIVGPLVMVGYSLTHIDGVVRFGSLYEYVASFGIFNGADVGKTIDNGLYLLIIY
                     FSWFAVFLSLWYMGKVIKMMINAFGDNRNFRVQLYLFTPVSLFFTGSIFSPEYAFLIV
                     CPFILRKALNITR"
     gene            complement(46827..48044)
                     /gene="wcaC"
                     /locus_tag="JN001_000280"
     CDS             complement(46827..48044)
                     /gene="wcaC"
                     /locus_tag="JN001_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaC"
                     /protein_id="HAY9051624.1"
                     /translation="MNILQFNVRLAEGGAAGVALDLHQRALQQGLASHFVYGYGKGGK
                     ESVSHQNYPQVIKHTPRMTAMANIALFRLFNRDLFGNFNELYRTITRTPGPVVLHFHV
                     LHSYWLNLKSVVRFCEKVKNHKPDVTVVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCP
                     TLNNYPPVKIDRAHQLVAGKRQLFREMLALGCQFISPSQHVADAFNSLYGPGRCRIIN
                     NGIDMATEAILADLPPVRETQGKPKIAVVAHDLRYDGKTNQQLVREMMALGDKIELHT
                     FGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVI
                     ATHSDAAREVLQKSGGKTVSEEDVLQLVQLSKPEIAQAIFGTTLAEFSQRSRAAYSGQ
                     QMLEEYVNFYQNL"
     gene            complement(48041..48529)
                     /gene="wcaB"
                     /locus_tag="JN001_000281"
     CDS             complement(48041..48529)
                     /gene="wcaB"
                     /locus_tag="JN001_000281"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis acetyltransferase
                     WcaB"
                     /protein_id="HAY9051625.1"
                     /translation="MLEDLRANSWSLRPCCMVLAYRVAHFCSVWRKKNVLNNLWAAPL
                     LVLYRIITECFFGYEIQAAATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG
                     ADNMACPHIGNGVELGANVIILGDITLGNNVTVGAGSVVLDSVPDNALVVGEKARVKV
                     IK"
     gene            complement(48532..49371)
                     /gene="wcaA"
                     /locus_tag="JN001_000282"
     CDS             complement(48532..49371)
                     /gene="wcaA"
                     /locus_tag="JN001_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colanic acid biosynthesis glycosyltransferase
                     WcaA"
                     /protein_id="HAY9051626.1"
                     /translation="MKDNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCS
                     TSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNR
                     LSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQV
                     FTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSP
                     KKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGI
                     RGR"
     gene            complement(49549..51711)
                     /gene="wzc"
                     /locus_tag="JN001_000283"
     CDS             complement(49549..51711)
                     /gene="wzc"
                     /locus_tag="JN001_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase Wzc"
                     /protein_id="HAY9051627.1"
                     /translation="MTEKVKQHAAPVTGSDEIDIGRLVGTVIEARWWVIGITAVFALC
                     AVVYTFFATPIYSADALVQIEQNSGNSLVQDIGSALANKPPASDAEIQLIRSRLVLGK
                     TVDDLDLDIAVSKNTFPIFGAGWDRLMGRQNETVKVTTFNRPKEMADQVFTLNVLDDK
                     NYTLSSDGGFSARGQAGQMLKKEGVTLMVEAIHARPGSEFTVTKYSTLGMINQLQNSL
                     TVTENGKDAGVLSLTYTGEDREQIRDILNSIARNYQEQNIERKSAEASKSLAFLAQQL
                     PEVRSRLDVAENKLNAFRQDKDSVDLPLEAKAVLDSMVNIDAQLNELTFKEAEISKLY
                     TKVHPAYRTLLEKRQALEDEKAKLNGRVTAMPKTQQEIVRLTRDVESGQQVYMQLLNK
                     EQELKITEASTVGDVRIVDPAITQPGVLKPKKELIILGAIILGLMLSIVGVLLRSLFN
                     RGIESPQVLEEHGISVYASIPLSEWQKARDSVKTIKGIKRYKQSQLLAMGNPTDLAIE
                     AIRSLRTSLHFAMMQAQNNVLMMTGVSPSIGKTFVCANLAAVISQTNKRVLLIDCDMR
                     KGYTHELLGTNNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVPPNPSELLMSER
                     FAELVNWASKNYDLVLIDTPPILAVTDAAIVGRHVGTTLMVARYAVNTLKEVETSLSR
                     FEQNGIPVKGVILNSIFRRASAYQDYGYYEYEYKSDAK"
     gene            complement(51714..52157)
                     /gene="wzb"
                     /locus_tag="JN001_000284"
     CDS             complement(51714..52157)
                     /gene="wzb"
                     /locus_tag="JN001_000284"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight
                     protein-tyrosine-phosphatase Wzb"
                     /protein_id="HAY9051628.1"
                     /translation="MFNNILVVCVGNICRSPTAERLLQRYHPELKVESAGLGALVGKG
                     ADPTAISIAAEHQLSLEGHCARQISRRLCRNYDLILTMEKRHIERLCEMAPEMRGKVM
                     LFGHWDNECEIPDPYRKSRETFAAVYTLLERSARQWAQALNAEQV"
     gene            complement(52163..53302)
                     /locus_tag="JN001_000285"
     CDS             complement(52163..53302)
                     /locus_tag="JN001_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY9051629.1"
                     /translation="MMKSKMKLMPLLVSVTLISGCTVLPGSNMSTMGKDVIKQQDADF
                     DLDKMVNVYPLTPRLIDQLRPRPNVARPNMTLESEIANYQYRVGPGDVLNVTVWDHPE
                     LTTPAGQYRSSSDTGNWVQPDGTMFYPYIGKVHVVGKTLAEIRSDITGRLATYIADPQ
                     VDVNIAAFRSQKTYISGQVNKSGQQAITNVPLTILDAINAAGGLTDTADWRNVVLTHN
                     GREERISLQVLMQNGDLNQNRLLYPGDILYVPRNDDLKVFVMGEVKKQSTLKMDFSGM
                     TLTEALGNAEGIDMTTSNASGIFVIRPLKGEGGRNGKIANIYQLDMSDATSLVMATEF
                     RLQPYDVVYVTTAPVSRWNRLINQLLPTISGVRYMTDTASDIHNW"
     gene            53961..55544
                     /locus_tag="JN001_000286"
     CDS             53961..55544
                     /locus_tag="JN001_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310895.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY9051630.1"
                     /translation="MEWIADPSIWAGLITLIVIELVLGIDNLVFIAILAEKLPPKQRD
                     RARVTGLLLAMLMRLLLLASISWLVTLTQPLFSFRSFTFSARDLIMLFGGFFLLFKAT
                     MELNERLEGKDSNNPTQRKGAKFWGVVTQIVVLDAIFSLDSVITAVGMVDHLLVMMAA
                     VVIAISLMLMASKPLTQFVNSHPTIVILCLSFLLMIGFSLVAEGFGFVIPKGYLYAAI
                     GFSVMIEALNQLAIFNRRRFLSANQTLRQRTTEAVMRLLSGQKEDAELDAETASMLVD
                     HGNQQIFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEDEIRQLLERNQHT
                     RLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLNLRVLIRQPLVFPETLPLLPALEQFR
                     NARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDARHDIQKNADGSWTANG
                     HMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQVGDYLLKTLQVESHR
                     VQKVQIIPLHKDGELEYEV"
     gene            complement(55818..57671)
                     /gene="asmA"
                     /locus_tag="JN001_000287"
     CDS             complement(55818..57671)
                     /gene="asmA"
                     /locus_tag="JN001_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane assembly protein AsmA"
                     /protein_id="HAY9051631.1"
                     /translation="MRRFLTTLMILLVVLVAGLSALVLLVNPNDFRNYMVKQVAARSG
                     YQLQLDGPLRWHVWPQLSILSGRMSLTAQGASQPLVRADNMRLDVALLPLLSHQLSVK
                     QVMLKGAVIQLTPQTEVVRSEDAPVAPRDNTLPDLSDDRGWSFDISSLKVADSVLVFQ
                     HEDDEQVTIRNIRLQMEQDPQHRGSFEFSGRVNRDQRDLTISLNGTVDASDYPHDLTA
                     AIEQINWQLQGADLPKQGIHGQGSFQAQWQESHKRLSFNQISLTANDSTLSGQAQVTL
                     TEKPEWQLRLQFPQLNLDNLIPLNETANGENGAAQQGQSQSTLPRPVISSRIDEPAYQ
                     GLQGFTADILLQASNVRWRGMNFTDVATQMTNKSGLLEITQLQGKLNGGQVSLPGTLD
                     ATSINPRINFQPRLENVEIGTILKAFNYPISLTGKMSLAGDFSGADIDADAFRHNWQG
                     QAHVEMTDTRMEGMNFQQMIQQAVERNGGDVKAAENFDNVTRLDRFTTDLTLKDGVVT
                     LNDMQGQSPVLALSGAGTLNLAEQTCDTQFDIRVVGGWNGESKLIDFLKETPVPLRVY
                     GNWQQLNYSLQVDQLLRKHLQDEAKRRLNDWAERNKDSRNGKDVKKLLEKM"
     gene            complement(57693..58274)
                     /gene="dcd"
                     /locus_tag="JN001_000288"
     CDS             complement(57693..58274)
                     /gene="dcd"
                     /locus_tag="JN001_000288"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dCTP deaminase"
                     /protein_id="HAY9051632.1"
                     /translation="MRLCDRDIEAWLDEGRLSINPRPPVERINGATVDVRLGNKFRTF
                     RGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPAD
                     LVGWLDGRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSF
                     EPLSGPAARPYNRREDAKYRNQQGAVASRIDKD"
     gene            complement(58366..59007)
                     /gene="udk"
                     /locus_tag="JN001_000289"
     CDS             complement(58366..59007)
                     /gene="udk"
                     /locus_tag="JN001_000289"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HAY9051633.1"
                     /translation="MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVI
                     PEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTR
                     MKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
                     MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE"
     gene            59325..62622
                     /locus_tag="JN001_000290"
                     /pseudo
     CDS             59325..62622
                     /locus_tag="JN001_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
     gene            complement(62661..63518)
                     /gene="alkA"
                     /locus_tag="JN001_000291"
     CDS             complement(62661..63518)
                     /gene="alkA"
                     /locus_tag="JN001_000291"
                     /EC_number="3.2.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2"
                     /protein_id="HAY9051634.1"
                     /translation="MYTLNWQPPYDWSWMLGFLAARAVSGVETVADDYYARSLAVGEY
                     RGVVTAIPDIARHTLHINLSAGLEPVAAECLAKMSRLFDLQCNPQIVNGALGKLGAAR
                     PGLRLPGCIDAFEQGVRAILGQLVSVAMAAKLTAKVVQLYGERLDDFPEYICFPTPQR
                     LAAADPQALKALGMPLKRAEALIHLANAALEGSLPMTIPGDVEQAMKTLQTFPGIGRW
                     TANYFALRGWQAKDVFLPDDYLIKQRFPGMTPAQIRRYAERWKPWRSYALLHIWYTEG
                     WQPDGTDEL"
     gene            63652..65004
                     /gene="yegD"
                     /locus_tag="JN001_000292"
     CDS             63652..65004
                     /gene="yegD"
                     /locus_tag="JN001_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416573.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY9051635.1"
                     /translation="MFIGFDYGTANCSVAVMRDGKPHLLKMENDSTLLPSMLCAPTRE
                     AVSEWLYRHHDVPADDDETQALLRRAIRYNREEDIDVTAKSVQFGLSSLAQYIDDPEE
                     VWFVKSPKSFLGASGLKPQQVALFEDLVCAMMLHIRQQAQAQLPEAITQAVIGRPINF
                     QGLGGDEANAQAQGILERAAKRAGFRDVVFQYEPVAAGLDYEATLQEEKRVLVVDIGG
                     GTTDCSLLLMGPQWRSRLDREASLLGHSGCRIGGNDLDIALAFKNLMPLLGMGGETEK
                     GIALPILPWWNAVAINDVPAQSDFYSSANGRLLNDLVRDAREPEKVALLQKVWRQRLS
                     YRLVRSAEESKIALSNAAETRASLPFISDELATLISQQGLESALSQPLARILEQVQLA
                     LDNAQEKPDVIYLTGGSARSPLIKKALAEQLPGISIAGGDDFGSVTAGLARWAEVVFR
                     "
     gene            complement(65016..66938)
                     /gene="yegI"
                     /locus_tag="JN001_000293"
     CDS             complement(65016..66938)
                     /gene="yegI"
                     /locus_tag="JN001_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310906.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YegI"
                     /protein_id="HAY9051636.1"
                     /translation="MKPTLYTATGECVTPGRELGKGGEGAVYDIEEFVDSVAKIYHTP
                     PPASKQDKLAFMAATADAQLLNYVAWPQATLHGGRGGKVIGFMMPKVSGKEPIHMIYS
                     PAHRRQSYPHCAWDFLLYVARNIASSFATVHEHGHVVGDVNQNSFMVGRDSKVVLIDS
                     DSFQINVNGTLHLCEVGVSHFTPPELQTLSSFVGFERTENHDNFGLALLIFHVLFGGR
                     HPYSGVPLISDAGNALETDITHFRYAYASDNQRRGLKPPPRSIPLSMLPSDVEAMFQQ
                     AFTESGVATGRPTAKAWVAALDSLRQQLKKCPVSAMHVYPAHLTDCPWCTLDNQGVIY
                     FVDLGEEVITTSGDFVLAKVWAMVMASVAPPALQLPLPDHFQPTGRPLPLGLLRREYI
                     ILIEIALSALSLLLCGLQAEPRYIILVPVLSAIWIIGSLTSKAYKAEIQQRREAFNRA
                     KMDYEHLVSQIQQLGGLEGFIAKRAMLEKMKDEILGLPEEEKRALAALYDTARERQKQ
                     KFLEGFFASIPGVGPARKAALRSFGIETAADVTRRGVKQVKGFGDHLTQAVIDWKASC
                     DRRFVFRPNEAVTPADRQAVMAAKRHRLESALTVGATELQRFRLYAPARTMPLMEPLR
                     QAAEKLAQAQADLSRC"
     gene            complement(66935..67696)
                     /gene="pphC"
                     /locus_tag="JN001_000294"
     CDS             complement(66935..67696)
                     /gene="pphC"
                     /locus_tag="JN001_000294"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase PphC"
                     /protein_id="HAY9051637.1"
                     /translation="MSWRLVYASAVGTSHISADLPCQDACQMQVVWLNDQQPLLVMFL
                     ADGAGSVSQGGEGATLAVNEAMAFMVQKVQDGELGLNDVLATNMVLTIRQRLFAEAEA
                     KALAVRDFACTFLGLISSPDGTLIMQIGDGGVVVDLGHGLQLPLTPMVGEYANMTHFI
                     TDEDAVSRLETFTSTGRAHKVAAFTDGIQRLALNMLDNSPHVPFFTPFFNGLASVTQE
                     QLDLLPELLKQFLSSPAVNERTDDDKTLALALWLP"
     gene            complement(67693..68352)
                     /locus_tag="JN001_000295"
     CDS             complement(67693..68352)
                     /locus_tag="JN001_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY9051638.1"
                     /translation="MSEQITFATSDFASNPEPRCPCILLLDVSGSMSGRPINELNAGL
                     VTFRDELLADPLALKRVELGIVTFGPVHVEQPFTSAANFFPPILFAQGDTPMGAAITK
                     ALDMVEERKREYRANGISYYRPWIFLITDGAPTDEWQAAANKVFQGEEDKKFAFFSIG
                     VQGADMKTLAQISVRQPLPLQGLQFRELFSWLSSSLRSVSRSTPGTEVVLEAPKGWTS
                     V"
     gene            complement(68573..68632)
                     /gene="ibsA"
                     /locus_tag="JN001_000296"
     CDS             complement(68573..68632)
                     /gene="ibsA"
                     /locus_tag="JN001_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsA"
                     /protein_id="HAY9051639.1"
                     /translation="MMKHVIILVILLVISFQAY"
BASE COUNT        17803 a        17381 c        15990 g        17656 t
ORIGIN      
        1 cagtgacaaa gggatgccag cgtttttcaa acagaatatg agcgatcccg gttcggcgcg
       61 gcggtaaggt cgcgactttg agttttggct tcttcaactc tttcatcacc acccagagcg
      121 ttatcaccag caaaacggca accaacggcc acacagacaa attaaaagtc tcagcaatag
      181 agttatgttc agtactgtag tgctgcaagg tttgatttaa accactggca tgtggagaac
      241 gcatcaccgc actcatcacc atataagtga aaagcgcgat ccaactgccg atcaatccct
      301 cacccgcgcg ataccaggtc ccggtggcac atccacccgc cagaacaatt cccagcccga
      361 agatataccc acctataaca gtaccaggcc acgggaacgc cccggcttcg taagtcagta
      421 ggcccgccta aattaacgca aaaaccccca cactttgtac cgaaattgca atcagcaagg
      481 cgtaaaacat gcgattattt ttcgcgatat acatatcgcg aaaaccacca gtcaggcaaa
      541 aacgcccacg ctgcatgaca aatcccagca gagcaccaca aattagcccg cttaatatca
      601 ttgaaaacat aaattaatta accagatgaa tgttaatgag gaaattattc atgactggtg
      661 gaatgcagac caataaccaa attctctaaa ttagaacaaa tggttcttaa tgaggatttc
      721 gataaaaaag aataaaaaaa ccggagccaa atattcattc gactccggtt gattattaga
      781 aaagatgatt atgctacgtc ttcgtactgc ggaaccgggt tacggaagct cttggtgacg
      841 caagccaggt aaatcagacc gatagcagcc cagatcagac ccagaaccat tgagctttct
      901 tccaggttaa cccacagcgc accaacggtc agcgcaccac acatcggcag gaacagatac
      961 tggaagtgat ctttcagcgt cttattacgc ttctcacgga tccagaactg cgagatgacc
     1021 gacaggttaa cgaaggtgaa cgccaccagc gcaccaaagt taatcagcgc cgttgccatt
     1081 accaggtcga agttgattgc cagcagggca atcgcgccaa ccaggatgat gttcatcgcc
     1141 ggagtacgcc atttcgggtg tacataaccg aagaagcttt tcgggaatac gccgtcacga
     1201 cccattacgt acatcagacg cgctacgcct gcatgcgccg ccataccgga cgccagtacg
     1261 gtaatggtgg agaagatcag cgcgccaacc tggaacgctt tacccgcaac gtacagcatg
     1321 atttcaggct gtgacgcatc cggatcttta aagcgagaga tatccgggaa gtacagctgc
     1381 aggaagtaag ttgcaaagat gaagatcatg ccgccgatca gcgcggtcag gaaaatcgca
     1441 cgcgggatca cgcgctctgc atctttggtt tcttccgaca ggttgctgat gccgtcaaag
     1501 ccggtaaagg agaagcacag gattgtcgcc ccggtaatca tcgggataac atgcgcatcg
     1561 ccagaccaga atggacgagt gctcgccagc gtaccagcgc cttcaccttc aaatacgcca
     1621 taaacaacca tgcccagaat caccgcgatc agcaccacct gcaacacgac gattacagtg
     1681 ttgaagttcg ctacggattt cagactacgc aggttaaagg cggtcatgaa ggccaccaac
     1741 gccaccacaa acatccacga tgggatggaa ggcaccagag cttcaaaata gattttcgcc
     1801 agcagaatgt tgatcatcgg cgcgaacaga tagtcgagca gagaagacca acccaccata
     1861 aagccgacag tcgggctaat ggatttctgg gcgtaagtgt atgcagagcc agcagaagga
     1921 tagcggcgaa ccagcttccc gtagctcaga gccgtaaaca ggatcgcaat caatgcgaac
     1981 gcataggctg tcggcacatg accatccgtg aggcctgaaa cgataccaaa agtatcaaac
     2041 agcgtcatcg gctgcatata ggcaagaccc atcattacaa ccggaactaa cgtaagcgtt
     2101 ttacgcaatt ccacgcgaga ggtgtttgga gtaacgttat gcgacatggt cattctcctt
     2161 tacggtgata accgtcgcgt aagcaaaaaa ttgccccatt tttttggatt cctcagcgac
     2221 aacaactgtc gatttttagt aaatatctat ccggtacgaa gcccggcctc ttggtatgaa
     2281 tgattggttt gaagcaaaaa ataaccgacg ctgatgaaac gtcggttttt agtcattttt
     2341 tgacagcggc gcattgtgcc taaatggggg ggaaatgaca agagaatgag aggcttgtca
     2401 taataatttt tctttaaatg gctgattttc cgtcatcaga ttttgcataa acaccggcga
     2461 tcgcactatt tgctaaaatt tcatcccgcc accagccact ggcaagtcct gcggtctgtt
     2521 cattccagcc aatccagacg ggttcaaaga gagtttgggc gaccactttc ttctcgatta
     2581 acgcgccact atcgagaaaa tgttgcgcca gataacgggg taaatagccg cagccgaggc
     2641 cgctaatttg cagctccagc ttggttttaa aatcgaaaac ggtaatggct tcttgttcgt
     2701 cgagaagttg tgaggccgta gaagcgcctg cctgcgcagt atcccccacc acaatcgccc
     2761 gatatcgctt aataatacga cgatttaacg gctcttcttc cagggctaac ggatgatgag
     2821 gcgcgaccgc aaagacttgt tccagatcgc ccaaccgtga aaaaccaaac tcactggaag
     2881 atggtggctc atgcatcgcg ccaacaataa tatccgctcg cccctgagtc agggcatccc
     2941 atgaaccacc cagtacgcca ttgataaact tcaggcgcgt cacgctatga tgttgataaa
     3001 aagcttcaat cagtggcgct agcagagaaa aaggaaacgt gtcgtccacg ccaatcacca
     3061 gctcgttttc ccagccttca tgcagtttga tcgcctgctt ttccagttcc cgcacggtat
     3121 gcagaacttc ccgccctttc tctaataaca tttttccggt gcgggtgaat ttagcgcggt
     3181 gaccgctacg atcaagcaat tgaatattaa ggtcgctttc cagcttgtga acggtgtaac
     3241 tcagagcgga cggcgtcttg tagagtttgg ccgacgccgc cgcaaaactg ccttcttttt
     3301 ctaaggcatc gaggatcatc aacacatcca gcagtggttt catacacgcc cccttgcagt
     3361 gtatgcggcg tcctgctggc gtgatcgttt actccagcgg cattaccagc ggatcgggat
     3421 actggtattc aaatcccagt tcattacaaa tccgactgcc atcaataatc ttacctttgc
     3481 cgctgtccag actatttctg aactgcggag gttccagccc cagtaaacgg gccatctgcg
     3541 gatagaaaac attacgcgca gggtgagctg gcgcacatat attatagatg tgtccgcctt
     3601 taggtgcctg taacaacaga gtgatagcgc caataacatc ttctaaatgg actaaattaa
     3661 caccatgttc accatcaggc gcggtttttc cggcaaagaa gcgtccggga tgacgccccg
     3721 gtccgaccag gcccgcaaga cgcagaatat cgaccgaagt accgggtaaa ttgtgcagcc
     3781 agtcttcgag ttcttctaat actcgtccac tgttggttac cggattacgc ggggtagttt
     3841 ctttcaccat gccttgcgca tcgccataga cagatgttga gctggtaaaa ataattcggg
     3901 gaatacgatg ggccagcgcg ctatccacta actcttgtac cgcttgtaaa tagaactcat
     3961 cgccggagcc gctacgacgt gccggaagcg taatgaccag tgcatcggca tccatcaggg
     4021 catccagatc gtcagaatcg caaactaact caggctccat gcgaagcaga tagctatcaa
     4081 tgccactcat tcgggccgct tcgacaccat cttgtgtggt tttactcccg gtgacttgcc
     4141 agcctcgcgc tgaaagtgac atcgccagcg gcatgcctaa ccaccctaac ccgacaattg
     4201 cgaccttttt catccgttat ctcctgatac accttagatc tataaggcta cgctagcgta
     4261 tcaaaactga caattcattc tatgaatgaa tctgttcaat aatgataacg acatgctgca
     4321 atgagcagtg aatcgtcggt aaccgcgtat accagacggt gctcctctgt aatgcgtcgg
     4381 gactagaaac ctgacaaatt atgtttcagg ggttctggct tccccttacc ttcaaatggc
     4441 gttctgcggg tatctttgat aagttcattg atctttttaa caattcgctt atctgtttcc
     4501 tgccagtaca gataatcatc ccatgattcc tcagaccaga ttagtttcac tcaataatgt
     4561 ccttttctgt tcctttgcct gatttcaggc tatcgattga gtccatcaat ctccgggcgt
     4621 tagcggggga acgcagtaga taagccgtct cttccagcga gttgtattct tcgagtgaca
     4681 tcagaacaca agcctcccca ttctgacgag taataaggat cggggcatga tcttcaacgg
     4741 ctttcatcat tgttgccgac aaattctgac gcgcttcgct gtagctaatt gtacgcatgt
     4801 caatctcctc ttttgtacag ttcattgtac aatgatgggc gttaattaac tatttattaa
     4861 ttagtttgta gatcaaggta ttgtcagtga gacgaaaatc caggcttcgc tatttttggt
     4921 gccgtcagct tagaggacag tcctcttagc cccctccttt ccccgctcat tcattaaaca
     4981 aatccatcgc catagaatat ataaaaaagc ccttgctttc taacgtgaaa gtggtttagg
     5041 ttaaaagaca tcagttgaat aaacattcac agagactttt atgacacgcg ttcaatttaa
     5101 acaccaccat catcaccatc atcctgacta gtctttcagg cgatgtgtgc tggaagacat
     5161 tcagatcttc cagtggtgca tgaacgcatg agaaagcccc cggaagatca ccttccgggg
     5221 gcttttttat tgcgcggttg ataacggttc agacaggttt aaagaggaat aagaaaatga
     5281 cagacaacac tcgtttacgc atagctatgc agaaatccgg ccgtttaagt gatgactcac
     5341 gcgaattgct ggcgcgctgt ggcattaaaa tcaatcttca cacccagcgc ctgatcgcga
     5401 tggcagaaaa catgccgatt gatattctgc gcgtgcgtga cgacgacatt cccggtctgg
     5461 taatggacgg cgtggttgac ctcgggatta tcggcgaaaa cgtgctggaa gaagagctgc
     5521 ttaaccgccg cgcccagggt gaagatccac gctactttac cctgcgtcgt ctggatttcg
     5581 gcggctgccg actttcactg gcaacgccgg ttgatgaagc ctgggatggc ccgctctcct
     5641 taaacggtaa acgtatcgcc acctcttatc ctcacctgct caagcgttat ctcgaccaga
     5701 aaggtatctc ttttaaatcc tgcttactga acggttctgt tgaagtcgcc ccgcgtgccg
     5761 gactggcgga tgcgatttgc gatctggttt ccaccggtgc cacgctggaa gctaacggcc
     5821 tgcgcgaagt cgaagttatc tatcgctcga aagcctgcct gatacaacgc gatggcgaaa
     5881 tggaagaatc caaacagcaa ctgatcgaca aactgctgac ccgtattcag ggtgttatcc
     5941 aggcgcgtga atcaaaatac atcatgatgc acgcaccgac cgaacgtctg gatgaagtca
     6001 tcgccctgct gccaggtgcc gaacgcccaa ctattctacc gctggcgggt gatcaacagc
     6061 gcgtagcgat gcacatggtc agtagcgaaa ccctgttctg ggaaacgatg gaaaaactga
     6121 aagcgctggg tgccagttca atcctggtcc tgccgattga gaagatgatg gagtgatcgc
     6181 catgagcttt aacacaatca ttgactggaa tagctgtact gcggagcaac aacgccagct
     6241 gttaatgcgc ccggcgatct ccgcttctga aagcattacc cgcactgtta acgatattct
     6301 cgataacgtg aaagcacgcg gcgatgaggc cctgcgggaa tacagcgcga agtttgataa
     6361 aaccacggtt accgcactga aggtgtctgc tgaggaaatt gccgccgcta gcgaacgcct
     6421 gagcgacgag ctaaaacagg cgatggcggt ggcagtgaag aatattgaaa ccttccacac
     6481 tgcgcaaaaa ctgccgccgg tagatgtaga aacgcagcca ggcgtgcgtt gccagcaggt
     6541 cacgcgcccg gtcgcttcag ttgggttgta tattcctggc ggctccgccc cgctcttctc
     6601 aacggtatta atgctggcga ctccggcgcg tattgcgggc tgtaaaaaag tggtgctgtg
     6661 ctcaccgccg ccgattgccg atgagatcct ttatgcggcg cagctgtgcg gtgtgcagga
     6721 cgtgtttaac gtcggcggcg cacaggccat tgccgcactg gcgtttggta cggaatctgt
     6781 gccgaaagtg gacaaaatct tcgggccggg caacgccttt gtcaccgaag cgaaacgtca
     6841 ggtgagccag cgtctggacg gtgcggcgat cgatatgccc gcaggcccgt cggaagtgtt
     6901 ggtcattgcc gacagtggcg caacgccgga tttcgtggct tctgatttgc tttctcaggc
     6961 tgaacacggc ccggactcac aggtgatttt actgacgccc gctgctgata tggcgcgtcg
     7021 cgttgccgag gctgtcgaac gccagctggc agaactgccg cgtgctgaaa ccgcccgtca
     7081 ggcactgaac gccagccgcc tgatcgtgac taaagattta gcgcagtgcg tagagatctc
     7141 caaccagtac ggcccggagc acctgatcat ccagacccgc aacgcccgcg atctggtcga
     7201 tggcattacc agtgccggtt cggtatttct tggtgactgg tcactggaat cggcaggtga
     7261 ttacgcctcc ggcaccaacc acgttctgcc gacttacggt tacaccgcca cctgttccag
     7321 cctcgggctg gcagatttcc agaagcgcat gaccgtgcag gaactgtcga aagaaggttt
     7381 ctccgcgctg gcttcgacca ttgaaacatt ggccgccgcc gagcgcctga ccgcccataa
     7441 aaatgccgtt actttacgtg ttaacgccct taaggagcaa gcatgagcat cgtgactatt
     7501 accgatttag cgcgtgaaaa cgtgcgcaac ctgacgccgt atcagtcggc gcgtcgtctg
     7561 ggcggtaacg gcgatgtctg gctgaacgcc aacgaatatc ccacagccgt ggaatttcag
     7621 cttactcagc aaacgctcaa ccgctacccg gaatgtcagc cgaaagcggt gattgaaaat
     7681 tacgcgcaat atgcaggcgt aaaaccggaa caggtgctgg tcagccgtgg cgcggacgaa
     7741 ggtattgaac tactgattcg cgctttttgc gaaccgggta aagacgccat cctctactgc
     7801 ccgccaacgt acggcatgta cggcgtcagc gccgaaacca ttggcgtcga gtgccgcaca
     7861 gtgccgacgc tggacaactg gcaactggat ttacagggca tttccgacaa gctggaaggc
     7921 gtaaaagtgg tctatgtttg cagccccaac aacccgaccg ggcaactgat caatccgcag
     7981 gattttcgca ctctgctgga gttaacccgc ggtaaagcga ttgtggttgc cgatgaagcc
     8041 tatatcgagt tttgcccgca ggcatcgctg gctggctggc tggcggaata tccgcacctg
     8101 gctattttgc gcacactgtc gaaagctttt gctctggcgg gccttcgttg cggatttacg
     8161 ctggcaaacg aagaagtcat caacctgctg atgaaagtga ttgcccccta cccgctctcg
     8221 acgccggttg ccgacattgc ggcccaggcg ttaagcccgc aggggatcgt cgccatgcgt
     8281 gagcgggtgg cgcaaattat tgcagaacgc gaatgcctga ttgccgcact gaaagagatc
     8341 ccctgcgtgg agcaggtttt cgactctgaa accaactaca ttctggcgcg ctttaaagcc
     8401 tccagtgcag tgtttaaatc tttgtgggat cagggcatta tcttacgtga tcagaataaa
     8461 caaccctctt taagcggctg cctgcgaatt accgtcggaa cccgtgaaga aagccagcgc
     8521 gtcattgacg ccttacgtgc ggagcaagtt tgatgagtca gaagtatctt tttatcgatc
     8581 gcgatggaac cctgattagc gaaccgccga gtgattttca ggtggaccgt tttgataaac
     8641 tcgcctttga accgggcgtg atcccggagc tgctgaagct gcaaaaagcg ggctacaagc
     8701 tggtgatgat cactaatcag gatggtctgg gaacacaaag tttcctgcag gcggattttg
     8761 atggcccgca caacctgatg atgcagatct tcacctcgca aggcgtgcag tttgatgaag
     8821 tgctgatttg tccgcacctg cccgccgatg agtgcgactg ccgtaagccg aaagtaaaac
     8881 tggtggaacg ttatctggct gagcaagcga tggatcgcgc taacagttat gtgattggcg
     8941 atcgcgcgac cgacattcaa ctggcggaaa acatgggtat taatggttta cgctacgacc
     9001 gcgaaaccct gaactggccg atgattggcg agcaactcac taaacgagac cgttacgccc
     9061 atgtagtgcg caacaccaaa gagacgcaaa ttgacgtcca ggtgtggctg gatcgcgaag
     9121 gtggcagcaa gattaacacc ggcgttggct tctttgatca catgctggat cagatcgcca
     9181 cccacggcgg tttccgtatg gaaatcaacg tcaaaggcga cctctatatc gacgatcacc
     9241 acaccgtcga agataccggc ctggcgctgg gtgaagcgtt aaaaattgcc cttggcgaca
     9301 aacgcggtat ttgccgcttt ggttttgtgc taccgatgga cgaatgcctt gcccgctgtg
     9361 cactggatat ctctggtcgc ccgcacctgg aatataaagc cgaatttacc taccagcgcg
     9421 tcggcgatct cagcaccgag atgatcgagc acttcttccg ttcgctgtct tacaccatgg
     9481 gcgtgacgct acacctgaaa accaaaggta aaaacgatca ccaccgtgta gagagcctgt
     9541 tcaaagcctt tggtcgcacc ctgcgccagg ccatccgcgt ggaaggcgac accctgccct
     9601 cgtcgaaagg agtgctgtga tgaacgtggt gatcctggat accggctgcg ccaacctgaa
     9661 ctcggtgaag tctgccattg cgcgccacgg ttatgaaccc aaagtcagcc gtgacccgga
     9721 cgtcgtgttg ctggccgata aactattttt acccggcgta ggcaccgcac aagcagcgat
     9781 ggatcaggtg cgtgagcgcg aactgtttga tctcatcaaa gcctgtaccc aaccggtgct
     9841 gggcatctgc ttagggatgc aactgcttgg gcggcgcagc gaagagagca acggcgtcga
     9901 cttgctgggc atcatcgacg aagacgtgcc gaaaatgacc gactttggtc tgcccctgcc
     9961 gcatatgggc tggaaccgcg tttacccgca ggcaggcaac cgcctgtttc aggggattga
    10021 agatggcgcg tacttttact ttgttcacag ctacgcaatg ccagtcaatc cgtggaccat
    10081 cgcccagtgt aattacggcg aaccgttcac cgcggcggta caaaaagata acttctacgg
    10141 cgtgcagttt cacccggagc gttctggtgc cgctggcgct aagttgctga aaaacttcct
    10201 ggagatgtga tgattattcc ggcattagat ttaatcgacg gcaccgtggt gcgtctccat
    10261 cagggcgatt acggcaaaca gcgcgattac ggtaacgacc cgctgccgcg cttacaggat
    10321 tacgcagcgc agggtgccga agtgctgcat ctggtggatc tgaccggagc aaaagatccg
    10381 gcaaaacgtc aaatcccgct gattaaaacc ctggtcgcgg gcgttaacgt tcctgtgcag
    10441 gttggcggcg gcgtgcgtag cgaagaagac gtggcggcgt tactggaagc gggcgttgcg
    10501 cgcgtggtgg ttggctccac cgcggtgaaa tcaccagaaa tggtgaaagg ctggtttgaa
    10561 cgtttcggtg ccgatgcctt agtactggcg ctggatgtcc gtattgacga gcaaggtaac
    10621 aagcaggtgg cggtgagcgg ctggcaagag aactcgggcg tttcactgga acaactggtg
    10681 gaaacctatc tgcccgtcgg cctgaaacat gtgctttgta ccgatatctc gcgcgacggc
    10741 acgctggcag gttctaacgt ctctttatat gaagaagtgt gcgccagata tccgcaggtg
    10801 gcatttcagt cctccggcgg cattggcgac attaacgatg ttgctgctct acgtggtact
    10861 ggcgtgcgcg gcgtaatagt tggtcgtgca ttactggaag gtaaattcac cgtgaaggag
    10921 gccatcgcat gctggcaaaa cgcataattc cgtgtctcga cgttcgtgat ggtcaggtgg
    10981 tgaaaggcgt acagtttcgc aaccatgaaa tcattggcga tatcgtgcca ctggcaaaac
    11041 gctacgccga agaaggtgca gatgaactgg tgttctacga tatcaccgct tccagcgatg
    11101 gccgtgtggt agataaaagc tgggtatctc gcgtggcgga agtgatcgac attccgtttt
    11161 gtgtggcggg tgggattaag tctctggaag atgccgcgaa aattctttcc tttggcgcgg
    11221 ataaaatttc cataaactcg cctgcgctgg cggacccgac gttaattact cgcctggccg
    11281 atcgctttgg cgtgcagtgt attgtagtcg gtattgatac ctggtacgac ggcgaaaccg
    11341 gtaaatatca tgtgaatcaa tataccggcg atgaaagccg cacccgcgtc actcagtggg
    11401 aaacactcga ctgggtacag gaagtgcaaa aacgcggtgc cggagaaatc gtcctcaaca
    11461 tgatgaatca ggacggcgtg cgtaacggtt acgacctcga acaactgaaa aaagtgcgtg
    11521 aagtttgcca cgtcccgcta attgcctccg gtggcgcggg caccatggaa cacttcctcg
    11581 aagccttccg cgatgccgac gttgacggcg cgctggctgc ttccgtattc cacaaacaaa
    11641 taatcaatat tggtgaatta aaagcgtacc tggcaacaca gggcgtggag atcaggatat
    11701 gttaacagaa caacaacgtc gcgaactgga ctgggaaaaa accgacggac ttatgccggt
    11761 gattgtgcag cacgcggtat ccggtgaagt gttaatgctg ggctatatga acccggaagc
    11821 cttagacaaa accatcgaaa gcggcaaagt caccttcttc tcgcgcacta aacagcgact
    11881 gtggaccaaa ggcgaaacgt cgggcaattt cctcaacgta gtaaatattg cgccggactg
    11941 cgacaacgac acgctactgg tactggcgaa tcctatcgga ccaacctgcc acaaaggcac
    12001 cagcagctgc ttcggcgaca ccgctcacca atggctgttc ctgtatcaac tggaacaact
    12061 gctcgccgaa cgtaaatctg ccgacccgga aacctcttac accgccaaac tgtatgccag
    12121 cggcaccaaa cgcattgcgc agaaagtggg cgaagaaggc gtggaaaccg cactggccgc
    12181 gacggtacat gaccgctttg agctcaccaa cgaggcgtct gatttgatgt atcacctgct
    12241 ggtattgttg caggatcagg atctggattt aacaacggtg attgagaacc tgcgtaaacg
    12301 tcatcagtga gttgcggggt aagcggatgc gatgttgtcg tcgcatccgg caaaaaaaac
    12361 gggcaaggtc tcaccaccct gcccattttc tttaaaaccg aaaagattac ttcgcgttgt
    12421 aattacgcag agcgttacgc cccagcacaa tccccgcgcc aaccatgccg cccagcagca
    12481 ctgccaaaat caaggtaatt gcctttttcg ggctatcgcg acgaataggt aacgtcggtt
    12541 tcattacata gcggtaagca tgaatatcaa gatcatcaac ctttaagctt tcgatatcca
    12601 gcaggttttg acgtgtctga tagtagtttg atgagaacac caacggacgg gtcgcctcat
    12661 gcttaatcat cgactccagc gcttcgctcc ccaaaaggaa caacgtatct tgtgtcacat
    12721 cttcagtctg ctgaacctgt ggctttgtca cctgcgcctg attcgcatac tgcaacgctt
    12781 cctgaatctg acggatacgc agatctttct gctcctgcgc gactacttcc tgagttttca
    12841 gagaatcctg caagtttttc atacgcagcg cgatgttgtc tttcaggtct ttttccagtt
    12901 cttcgtttac ctggtcgtca acttgctgga tatactgcgc cagctgtttc tgcgcacctt
    12961 cagctgtttc accaacataa gaaaccgcta aaggtaagga ctgattttta acggtaggct
    13021 caatggtcag tttttcaggt tcttcctgat tatccagcgt ttccgctaat gctgagaaag
    13081 cagtgctgta acgtccgata agtgaagtct gaatgtcgga gactttcggt acagccggac
    13141 cgtaaatcac attcatcgcg ttggtataac cagcgatttg ccccacatca ggttgagtaa
    13201 cgatagctgt ggaagtccac ttttctttgg caacggccag ataccctata gccagggcaa
    13261 tagccacaat gacagagatg ataattgtca tcttgccgcg ccacaactgc accaggaaat
    13321 caatcaaatc aatctgttcc gggtcatggt tttgcccaga aacattatta ttttctactc
    13381 tcatcattac cctaacggac gaaataattt taagtcgcca tagtttagcg ataatcgcca
    13441 tgaatgctat aggataaatg ataaaaataa tgaattatta caaagggaac ataagagaat
    13501 cagggcgaaa atcgcactga taacaagatg ttagtcgctg ccaaaaagat cgcgggtgta
    13561 gactttgtct gccacatcct taagctcttc tgccatacgg ttggagataa tgacgtcggc
    13621 ttgtatagtc agcttagaac agctttgatt gtaaaatgag cacgttacca gaaaaaacag
    13681 ccaggtttag aactgatacc gattatcttt ttttcttgtc taacggtatg atttaacttt
    13741 cagttatgcc agatgaaaat tggctatatt ctagcctgag cgaggattat aaatgaaatt
    13801 tctggttacg ggagctgctg gctttatcgg tttctatgta agtaaacggc ttcttgcagc
    13861 tggtcatcag gttgtaggga ttgacaactt aaatgattat tacgatgtca acctcaaaca
    13921 agcacgactt gatttactca agcacgacaa tttcagtttt tataaaattg acctggccga
    13981 tcgcgagaaa atggccgcac tgtttgcaga cgagcggttc gatcgcgtaa taaacctcgc
    14041 tgcgcaagcc ggtgtacgtt actcccttga aaatcccaat gcatatgcag atgcaaacct
    14101 gattggattc ctgaacatac tggaaggatg ccgccataat aatgttcagc atctacttta
    14161 cgcttcctcc agttctgttt atggcatgaa ccgcaagatg cctttctcta cagatgactc
    14221 tgtagatcat cctgtttcgc tttatgcagc aactaaaaaa gcgaatgaac tcatggccca
    14281 tacgtattct catttgtatg gcttaccgac cacagggctg cgtttcttta cggtttatgg
    14341 tccatgggga cgtccggata tggcattatt taaatttact aaagccatgc tggaaggtaa
    14401 aagcattgat gtttacaact tcggcaaaat gaagcgtgac tttacttata ttgatgatat
    14461 tgccgaagct attattcgct tacaggatgt tattccagaa aaagatccac agtggactgt
    14521 agaaactgga tcgcctgcaa caagttcagc accgtatcgt gtctataaca ttggtaatag
    14581 ttcgcctgtg gagttgatgg actatatcaa tgccttagaa gaggctctgg gtattgaagc
    14641 caacaagaat atgatgcctc tccaacccgg tgatgtactg gaaaccagtg ctgatacaaa
    14701 agcactgtat gacgtaatag gattcaaacc tgaaacgtca gttaaagagg gggtaaagaa
    14761 ctttgtagaa tggtatcgta acttctataa agtttgattt tacaaaacca taagaaaagg
    14821 ccctaatata ttagggcctt ttcttagaat aaaacaaaat aattaatcat tgccaaacaa
    14881 gtcgcgcgta taaactttat ctgctacatc agccagatcg gcagacatac ggttagaaat
    14941 aataacatca gcttcttgtt tgaacgcatc cagatcacgt accacgcgcg aacggaaaaa
    15001 atcgtcctct ttcatcgctg gttcataaac gattactggc acacctttcg ccttgattcg
    15061 cttcataata ccctgaatcg aggaagcacg gaaattgtct gaaccactct tcataatcag
    15121 acgataaacg ccaacaactt tcggtttacg tgcaaggata gaatcggcaa taaagtcttt
    15181 tcgcgtgcgg ttagcatcaa caattgccga aatcagatta ttcggtacag attgatagtt
    15241 tgccagtaac tgcttggtat ctttcggcag acaataacca ccataaccaa atgagggatt
    15301 gttgtagtga ttaccgatac gcggatcaag gcaaaccccc tcaataattt ggcgggagtt
    15361 aagacccaga ctttcagcgt aactatctag ttcattaaaa taagccacac gcatcgccag
    15421 ataagtattg gcaaaaagtt taatcgcctc agcctcggtt gagtcagtaa acaatattgg
    15481 tatgtcttgc ttaatagcgc cttcctgtaa taacgctgca aaacgttcag cgcgatcgga
    15541 ttgctcacca atcacaatgc gtgatggatg caagttatca taaagagctt tcccttcgcg
    15601 taaaaactcc ggcgaaaaga tcacattttc aataccaaac cgttctttaa tggactctgt
    15661 aaaaccaaca gggatagttg attttataat cattaccgcg ttgggattaa tttctgtcac
    15721 atcgcgaatg accgcttcca cgcttgaggt attaaaataa tttgttttcg ggtcataatc
    15781 ggtaggcgtg gcaataataa cataatcggc atttttatac gcgtcatact tatctgtcgt
    15841 agcgcggaaa ttgagatctt tagtcgccag atactcttca atctccttat caacaatcgg
    15901 tgactgcttc ttgttaagca tgtctacttt ggcctgaacg atatccagtg caaccacttc
    15961 gtgattttgc gcaatcagaa taccatttga aagaccaaca taacctgttc ctgaaattgt
    16021 tattttcatt agctctgact tcttccggtt aaacatttag agtggtcatt aatccaccac
    16081 cacaacttca tctactgcgg gatttttaac gctaatgtag atgaactgtc aaggcagcga
    16141 tcctgctgtg cggcgctgta ttatatcgcg tttttaacta taaattataa aaaaaggccc
    16201 taacctgccg ctttgtataa taaaaaagcc cggagggttt ctccgggcct tgcattgatt
    16261 aattgattta aatcagatta atccagccat tcggtatgga acacaccgtc tttatcaatg
    16321 cgtttataag tatgcgcacc gaaatagtca cgctgtgcct ggatcaggtt cgcaggcaga
    16381 acagcggcac ggtagctatc ataataggca acagcagcgg cgaaggtcgg aaccgggata
    16441 ccgttctgta ctgcgtaagc gacgacatcg cgcagcgcct gctggtagtc atcggcgatt
    16501 tgcttgaagt acggggccag cagcaggtta gcgatctgcg gattttcggc atatgcatcg
    16561 gtgattttct gcaggaactg cgcacggatg atgcagccag cacggaaaat cttcgcgatt
    16621 tcgccgtagt tcagatccca gttgtactct tcagacgccg cacgcagttg agagaacccc
    16681 tgagcgtaag aaacgatttt gcccagatac agtgcacggc gaactttttc gatgaactca
    16741 gccttgttgc cagctggctg cgcttgtggg ccagagagaa ctttagacgc agcaacgcgc
    16801 tgatctttca gagaagagat gtatcgtgca aacacagact cggtaatcag cgacagcggt
    16861 tcgccgagat ccagtgcgct ctggctggtc catttgcccg tacctttgtt tgccgcttca
    16921 tccaggatca catcaaccag gtagttaccg tcttcatctt ttttagtgaa gatgtctttg
    16981 gtgatatcga tcagatagct gctcagttca ccgttattcc actcggtaaa ggtctgcgcc
    17041 aactcttcgt tggaaaggtt caggccgcct ttaagtagag aataggcttc agcaatcagt
    17101 tgcatatcac cgtattcaat accgttgtga accatcttca catagtgacc tgcaccatcg
    17161 gcaccaatat aggtaacgca tggctcaccg tcttcagcca ctgcggcgat tttggtcagg
    17221 atcggtgcaa ccagttcata ggcttctttc tgtccgccag gcataatgga aggacctttc
    17281 agcgcacctt cttcaccgcc ggaaacaccg gtaccaatga agttaaagcc ttctgcagaa
    17341 agctcacgat tacgacgaat ggtgtcctgg aagaaggtat taccaccatc aatgatgatg
    17401 tcacctttat cgaggtatgg cttgagggaa tcaatagcag catccgtgcc tgcacctgct
    17461 ttcaccatta acaggatgcg acgaggcgtt tccagagatt caacaaactc tttcaccgta
    17521 tagtaaggaa ccagtttctt gcctggattt tcggcaatca cttcttccgt cttctcacgg
    17581 gaacggttga aaatagagac ggtataacca cggctttcga tgttgagcgc aaggttgcgc
    17641 cccatcactg ccataccgac gacgccgatc tgttgctttg acattgttta ctcctgttag
    17701 ggggttacta cattaaatat ttaattaata atattaataa cgccaaaaca acttaatcat
    17761 gtaatatttt atttacacaa ttcagtgctg aacggataac ttggtgcata tcataatact
    17821 tatattcagc aaggcgtcct ccgaaaatta ctttactctc catttgcgaa agctctctat
    17881 atttatgata tatatccata ttttttttat cattaatggg ataataaggc tcttgaccct
    17941 cactccactc tattgggtac tcttcagtta taaaggtata ttcagtttca taagagtcat
    18001 caaaatgctt atgctcaatt atcctagtaa aaggaatatc tttttcagta taattaatta
    18061 cggcattgcc ttgataatta gcctcctcaa ttttttttgt tataaacttt aaggatctat
    18121 attctaaagt tcccaacttt ttatcaaaat aagcatctat aggcccagta tatataatcc
    18181 gttccgccat agaattatac ttatcctttt ctgataaata gtcaacatta agcagaagat
    18241 caacaccatt aagcatctta tcaattattt gtgtgtatcc tccgatagga accccctgaa
    18301 atctatcggt gaaataatta ttatcgaaag tgaatcgaac tgggattctt tttataataa
    18361 aaggcggtaa ttcagaacat gaacgtcccc attgtttttc cgtatacccc ttaattagtt
    18421 tttcataaac atcttcccct accagggaaa gagcttgttc ttctaaattt gtgggagtta
    18481 tgttagaata tttacttctt tgtaaatcta ttttatcttg agcttcagaa ggagtttttg
    18541 tcccccataa ctgataaaag gtattcatat tgaaaggtaa gttatataat ttacctttat
    18601 gatatgctaa tggagaatta gtgaatctat taaaagaagc gaatttattt atataattcc
    18661 agatatattg atcgtttgta tgaaatatat gagcaccata cttatgtatg tgaatatcgt
    18721 caactttttc agtatagata ttccctccaa tatgatccct tttctcaatg accaacacac
    18781 gtttatttct tttatttaat tcataagcgc aaaccgcacc aaataaacct gaacctataa
    18841 ttatgaaatc atattgcatt gcggttccta tgtcatctaa cttagttaaa attaaagttc
    18901 tttaagtaag caacctttca tatctttatc tgataatata ggattactta aaggccattg
    18961 aatattgagt tctggatcat tccataataa acaacactca tcctcaggat cataatattc
    19021 tgtgcattta tattcaaaat cggccatttc agataataca acaaaaccat gtgcgaaacc
    19081 tggtggtacc caaaattgtt ttttattcat ttcagaaagt aacacaccaa tccattggcc
    19141 ataattaggt gattcttttc taatatcgac ggcaacatca aaaacttcgc cgcgcacaac
    19201 tcttacaagt ttaccttgtg gcttcgtttt ttggaaatgt aatcctctta aaacattttt
    19261 gcttgatcgt gaatagttat cttgtacgaa atcaaattct atatttaata aattttgata
    19321 acgttgtttt tgatatactt ctaaaaaaaa acccctgttg tcaccatata cgaccggttc
    19381 aataatttta actccatcca gaacagtgtc ttgaactttc atatttatta taacctttag
    19441 tgatttctat ttaaaacgtc attaattgta ttagtatact tctctatgat cttattttca
    19501 tcacaatgtg attcagcaaa ttctctcgac ttaatagaca ttgtgttttt catttcgtct
    19561 gtcagtagaa tatacttttc aataatgtca actaagctat caagatcatt aggttgacac
    19621 aaaaaaccat taacttcatt ttgcaccata tccctacagc caacattatc tgttgtcaaa
    19681 atagctaacc cactagaagc accttcaatc aacgctttag gtacaccttc tctataaaat
    19741 gatggtaata ctattgcatc ataatgcttc attatactag caacgtcatc ggaagtccca
    19801 tagtaattaa ctatacccct cgtacaaaaa ccttcaatca attccttcgt gattatcttt
    19861 tcattttttt caaatgcacc taacagtgaa aatgaacaat taggatattt ggattttatt
    19921 atttctgcgg ccttaagata gtgaagtatg cctttggtat atagaagtct agcaacaagt
    19981 atgaatttca cacatgatct ttgctttaaa ttcttatttg agggaagaaa ttttgataaa
    20041 tcaacaccag acccaaatat tcggcatgtt ttctcataat tgacgcagcc agaattaatc
    20101 aataactgac gatcatcctc gttttgaaaa aaaacgaatg ctgctttctt taatgctatc
    20161 ttatataata gcttaacaat ttgacttaat atcgtattac tattaacaaa tgcacttcca
    20221 aggccagaaa tattaggtat cactttcgcg tcaaatttat aagcaagcaa accacaatat
    20281 atattagctt tgggtgtaaa cgttaatata acctgtggat tgaatttttt tataatttta
    20341 taatatgata ttagagatgt acattcagta aaaatattaa tagattttgg tttaagatca
    20401 accttctcaa atttagcgcc gaattttaaa atagaatcct tatattcata atccggtaca
    20461 accactaata catcaaaccc tatattaata agtgccttaa ttgtgcttcg tctaaaatta
    20521 tatatatacc aactactatt agcagttaaa actattttta aggaatgatt atcccttaaa
    20581 tgatcctttt cgtccaagca gtccatcttt tatcccctta aaaatataat ttaatcgttg
    20641 tcctccacgt tcacaaaaag cgtaaataat gattcggaca ggcattgtta tcaatttttt
    20701 taacttatat cttaaaggaa atacaggctc tctcagagct aataaccaat ttctataaac
    20761 ataatacaaa cgaaatggac tgcaaactgt aaatgtttta atccccataa tatttatatc
    20821 tttagatcct atattgtgag aaataaggac tttatctgtc actaggatat tccagccttc
    20881 tttcctagct ctgaaactcc attctatgtc aattaaatcg ataaaccaag atactttatt
    20941 taatccaata ttgataattg cctctagggg tatgagtgca ccagaagata ttatactttc
    21001 aacatcatgt atcgtttcac ttatctggga gcccagcttt atttcacgat catacttttt
    21061 cccattacgt tcatttatta ttgttggacc taatgcagca atattactcc ggagagagca
    21121 agcgtactca tactctttta acattgatga tatataatct tttgatatac atgaatcttg
    21181 atcaaatgta aagaataagg actttcctaa tccgatagct ttaatgaaac catagttctg
    21241 cgcaaacgca atgcctttgt tatctcctaa atgatagtaa tgaatgttgt tattacacaa
    21301 aacatcactt tctaagtgga gctcaggtgt attgtcaaca agtaatattt cgcactgttt
    21361 ttttcccagt gagtcaatca ttttattgat tttactaaca tcaggataat atagtacaat
    21421 tatcaccgct actctattca ttttttattc cacttataag atccatgatg agtccttttt
    21481 acaaaatttt tatcggatac tttaaaggtt atgtatcgat aaaacaaaaa atatcccgac
    21541 aataatacaa tcttccagtc ctgatatata tatgcataca caatagcagc atcaaaaaag
    21601 aaaaagtaat atttaaccct aaataaatca gggtaaataa taaaatcctt taacctttta
    21661 ataccatatt tctccttaca ggcgtgttct aatgttctga ttaaagggaa taataataat
    21721 atgataaaaa caaaaaatac actgcatgtg acagtgggta tcaaaggaat aatgtaacga
    21781 catgacacca aagaaaaata agtgattata tttctcttat cccggattgt attatgcaaa
    21841 taaaaggaga taattaaaaa ccctatacat aatacaaaat agataacagt atagtgatga
    21901 gcaatgatat cactttgata aattaataac gcgaatgata caaaaaaata aacaactcta
    21961 atgaaaatta tacttgataa tttactttta attgtatcac gcagctctcc acctcttatt
    22021 gttggtgctt tttctgtatt tattgttcta tagtcattgt ctaagtagcc tatttcataa
    22081 atggacatgg tcatcataaa tgacagaagc aaagatacaa aactaccatt atacaaaaaa
    22141 caacacagca atagaaaccc tggatatata ataaaccagc taattttttc atgccatgtt
    22201 ttcaatcttg aaatgaataa atatgataat gggaaataca atatcacata aacctcactt
    22261 tatctttgga gacaccaaat ctatttaata gtactctcca tttattttta tctttggctt
    22321 ttgaaataat cactgctgta tctgcaagtt taataagatt aatatcactg aaattatcag
    22381 tgacaatcaa acttacaggg ttattaactt gtaaatgctt tataccagta agattatatt
    22441 ctaataaccc tgttgattta ttgtcgataa attctaattt agatgatact gcctcaacat
    22501 tcaaattttt agcaattaca tttatgacag gatcaacgga agcagacatt aaaatgatct
    22561 tctcatgttt atatcgttct aaaagtgcca taacttcatt cttttcttta aaaatgagaa
    22621 attcatcata aaacaaattc gccaactctt ccaaagtaga cttttcatat ccttctaatg
    22681 tcttcaaaaa atgttttcgt aaggaacata tacgcaattt atgtagcaac tttccaaata
    22741 aggagcgtaa taataagcat ttaattaact tggtatattt tttttgtttc ctatgtacaa
    22801 atacaacata atcaaaagtt gtattcgaca aataaagagt gccacataca tcaaatacaa
    22861 caatatgttc gagcatgtta aactcccttc aaagttagag ttaatcttga gcaaaaacat
    22921 atcacataaa gcattgcaat tgcataaata tagaacatca acatatataa ttggtcaaaa
    22981 aattgaaata acaaggggaa gtacaaaata gagcaaatga caactgatat cgttttctta
    23041 tttttttttg ctacattgta caaagatgaa tgaaagaaac ctatgacaaa aaagaaaatt
    23101 aatgagtaca aaaaatcaga atattttgtt agcgaataaa atattgtaaa aacatttgtc
    23161 ttatactctt tatatgatat aaaattagct aatccacatg tagcatctcc attacaatct
    23221 ataactactg ctttaccttg caaaaccgaa tctaatgcaa aaatgtttgc caagctatag
    23281 ttcatcaatc catattttaa cgcttcgaat gctcctgaag agtcgtcaat tttatttaaa
    23341 aacaacatag ataaatagaa aaaaaatata ataccagaca ctgtgacaag taaatatttt
    23401 aaagatattt ttgaaaaaaa taatcgcaaa aacactattg gtataattag taataaaact
    23461 ttaattttag ctgttgataa taacgcataa aaaagtgaag taaaaaaaac aaaataaaat
    23521 gttcgattat tatatggtaa ccgggcccgc tctccttctt caatcttttt atatttattt
    23581 ttaaaatata aaaagctcca tacatatacc aatgggtata aaagatagta tatataccca
    23641 tatattttta ttaatcccga tttatctccg taattaattt ctgtacgtga atttatatag
    23701 gattcagtga agcccccctt ataataatat aaaaaaacta ttaaagtata gattaaaata
    23761 acaaacgaga taatatttgt aattaatact aacgcttttg tattgtttat attataggaa
    23821 aatacatgtt caaatatagg agcgtaaggt tttgccagta gagcccctac cgaaaaagat
    23881 aaacatgaaa ataaaattat acataatgta tagttagtta tgtctccatt tactcccgac
    23941 aaaaataaca gcccccccca gataaagaat agaatcgccg acggcgattt aatatcttta
    24001 ttaatactca gtaataatcc tgaatacata agcattatta tagctataaa aatggtcatg
    24061 ttcatttaag cttagctcta agttgagaaa ttaattgagc tcctcttcca ctgcattcat
    24121 cagtgttaat tacaaattcc tcaccgactt taaaaacttc tttattttta ttaatccata
    24181 cattcagaag tcgctcagca ataaagccga acacacgtga ttgatattca tcgtatctgc
    24241 ataaatttat ttctttctcc agctcatcta atatggaaaa caaccaatca caataacaat
    24301 caaaaatccc agccttcatt ataaacatat tataaagcga tatttttttt tgttctaaaa
    24361 gttctctgaa tgcaacacta taatcaggat ataatttatc aactattttt tttgccaaca
    24421 ttagatcttc gacattatgg aatttcctgt agtgttcaac aacagatagc ttcaaactct
    24481 ctttcaccgg aataattata tcatattgtt tcattttatt agaaatatta gctctgtcat
    24541 atatcctcac ctctttaaat ttaaaattcg ataaaacatt tccaaaatac ctcctataat
    24601 gaaccaagcc aatataatca tcattaaaaa gtttattttt ccaaagccaa tatataacgg
    24661 tcagctcaca ataattttta tttttacatg atatattatt ccctgtatca tctcccaaca
    24721 cttgatcaag cattttccct gatattttct tacccgcatg aatagggata tagcactcat
    24781 gattaggtaa ttcagtttgt ttatggcaag caatgaataa agccattaat attcctcttt
    24841 atttaaacaa atttattttc tttcttttta agaaaagata catcaatgat gcaactacgg
    24901 tttctgtaat taaaaccgtc atcgcagccc catacgcccc ggcaaaaaag atcaaaggag
    24961 caatgattat cacatgcata acaccacaaa ttagcagtat tttactaaat tgtcttttat
    25021 aaccatgtgt cagcatggtt tgaatgccaa aaaaattact aagagaaata ataaatggca
    25081 aaaaggctaa tattcttaaa atactaattg actcagtata tttatctccg actccatatc
    25141 ttattattat tggagaaagt atgcacagga gtaatgaacc tgaaaacgaa atgaataata
    25201 cgcccttaaa tgattttttc agaagattca tactttttgc ataattttct tcaaacaatg
    25261 aattaattct tggataaaca gcttgataaa taggattcat tagactctgg gctgcatttc
    25321 taattgtatt agcagcgtta aagtagccaa cagagacagg tccacatata aacccaagaa
    25381 caacaacagt tgttgttgta tataagctaa tagcagctgt tgaaatgaaa atatgccatc
    25441 cgctttttaa tgaataaatt ataccatcat aatcaaatac caatttccca atccagttat
    25501 tatttataat aatagcaaat ccaattaaac ctgctataaa attaacgccg ccttgaatca
    25561 aagcggctaa ccagatatct tgtggatttt ttactaacaa aaaagttaat ggtattaata
    25621 ataatcttgc acttaaacta cataatgtaa tccatttcat tttttctaat ccctggaaaa
    25681 accaaacagg gtataatata ttacctaaca ccattggaat aaatgatatt aacaccactt
    25741 gagcataata tagctcctta ataaaaaatg ttattccgaa aaatataaca attgccgaaa
    25801 gtgcaagtat aatcttacta aagaagacat tccaaaatat tgttgttaat ttttccttgt
    25861 cattcttact tttcgaaaca tcttgtgttg ctgaccaatt aaacccataa tcagtcacca
    25921 tcacaagata ttgcattgtt gcttgacaaa accctaatag accaaaagag tatggtccta
    25981 atactctaac aagataagga aatgttaaca atggcagtat aaaataactt ccttgcaata
    26041 tagctaaata gaagatattt ttattaagag aggtaacaag cttcaatgca atctccgagc
    26101 ctatttatat agctgcaact agttaatatt atgatatttt attatttatg atatttagca
    26161 gatactgacc ataagcattt tttttcagtg gttcagctaa tattttcacc tgctcagaat
    26221 caataaaccc tttacggtaa gcaatttctt ccgggcagga aactttcaac ccctgacgtt
    26281 cttcaattgt agcaatgaag ttgcttgcct caatcaggct ttgatgtgtc cccgtgtcca
    26341 gccacgcata accacgcccc atcatggcaa cggataaacg cccctgttcc atataaatac
    26401 ggttaatatc ggtaatttcc agttcaccac gggcagaagg cttaaggttt ttcgccattt
    26461 cgacaacgtc gttatcatag aaataaagcc cggttaccgc ataattactt tttggttgta
    26521 gcggtttttc ttccaggctt attgccgtac cgtttttatc aaactcaacg acaccgtagc
    26581 gttcaggatc attaacgtga taggcaaata ccgttgcacc actttctttg tcaacagcgg
    26641 tatccattaa cttcggcaga tcgtggccgt agaagatatt atcaccaaga accaaagcac
    26701 aatcatcacc accgataaac tcttcaccga taataaacgc ctgcgcaagc ccatctggag
    26761 tcggttgcac tttgtactga agatttagcc cccactggct accgtcaccc agcagttgtt
    26821 gaaaacgagg agtatcctgt ggcgtactaa taatcagaat atcgcgaata cccgccaaca
    26881 tcagtgtaga gagcgggtaa tagatcatcg gcttatcata aataggtaat agctgtttac
    26941 tgacagccat agtcacagga taaagacgtg taccagaacc acccgctaaa ataatacctt
    27001 tacgcgtttt catttcatca ttccttttaa ttcatcttgc tccatcatca cgaacaagat
    27061 gcaaaaacta ttaaattgct gtagtcgtaa ataattcgtt gagcattcgt ttcacgccaa
    27121 cctgccagtc aggcaaaaca agcgcaaagt tctgctgaaa tttttctgta ttaaggcgag
    27181 agttatgtgg acgacgagct ggtgtaggat aggctgttgc tggtactgcg ttgagcttgt
    27241 tgagtgcaag gggaatacct gctttgcgcg cctcttcaaa aaccagcgca gcataatcgt
    27301 gccaggttgt ggtaccactg gctaccagat ggtacatgcc tgcgacttct ggtttattca
    27361 gtgccacacg aatagcatgt gccgtacaat ctgccagcag ctcagcacct gttggcgcac
    27421 caaattgatc attaatcaca gccagttctt cgcgctcttt tgccagacgc aacatcgttt
    27481 tggcgaagtt atttccttta cctgcgtata cccagctggt acggaaaata agatgcttcg
    27541 cgcaatgttc ctgtaacgct ttttctccgg ctaacttggt ttcaccgtaa acatttagcg
    27601 gtgcggttgc atccgtctcc agccatggta tttcaccggt tcccggaaat acgtagtcag
    27661 ttgagtaatg aattacccag gccccaactt cattagccgc tttggcaatt gattcaacgc
    27721 tggtcgcatt gagtaattgt gcaaattcgg gttctgactc agccttatct actgcggtat
    27781 gagccgcagc attaacaatt acatcagggc gaattttttt gacggtttca gccacacctt
    27841 caggattact aaaatcacca caataatcag tggagtgaac atcaagagca atcaaattac
    27901 ccaaaggtgc gagagcacgc tgtagttccc aacctacctg ccctgttttg ccgaaaagga
    27961 gaatattcat tactggcggc cctcatagtt ctgttcaatc cacgattgat aagcaccact
    28021 tttcacattc tcgacccatt ttgcattagc caggtaccat tccactgttt tacgaatccc
    28081 gctctcaaac gtttcctgcg gtttccagcc caattcgcgg ctaatcttct ctgcatcaat
    28141 cgcataacgg cgatcgtgtc ccgggcgatc ggcaacataa gtaatttgct cacggtaaga
    28201 tttctctttc ggtacaatct catccaacaa atcacaaata gtgagcacta catcgatgtt
    28261 tttcttttcg ttgtgtccac caatgttata agtttcaccc gctttacctt cggttacgac
    28321 gatatataac gcacgcgcat gatcttcaac atacagccag tcacgaattt gatccccttt
    28381 gccataaata ggtaatgcct taccttccag agcattaaga attactagtg gaatcaattt
    28441 ttccggaaag tgataaggac cgtagttatt cgaacagtta gtcacaatgg tcggtaaacc
    28501 ataggtacgt ttccacgcac ggactaaatg atcgctggat gcttttgatg cggaataagg
    28561 actactaggc gcgtaagctg tcgtctcagt aaagaggggt aattgttctt tattatttac
    28621 ttcgtcagga tgaggcaaat caccatagac ttcgtcagta gaaatatgat gaaaacggaa
    28681 gctatttttc ttgtcgccat caagagcaga ccagtaattg cgagccgctt ccaaaaggac
    28741 ataagtacca acaatattgg tttcaataaa tgccgcaggg cctgtaattg aacgatccac
    28801 atggctttca gcagccaggt gcatcactgc atccggctga tgctgagcaa aaatccgcgc
    28861 cattgcagca gcatcgcaaa tatcagcatg ttcaaaaaca tagcgttcag agtcagaaac
    28921 atcagcaagt gattccaggt ttccggcgta cgttaattta tcgacattaa caacactatc
    28981 ctgcgtatta tttataatgt gacgaactac agcagaacca ataaatcctg cgccaccagt
    29041 aacaagtatc ttcactttat tattccatat tacttcagag catgctgtga aataagcggc
    29101 tctcagtttg attaatagag gtattaatgc acgctaccgc ccctggcttt acagctacca
    29161 gagcactgca tgcatgtcta cgatgtgacg agcgttaccc actcgcgcta aacccgaaaa
    29221 attcaaacgc taattgtctt accaatccgc tctggaaaca aggaaaatcc tggaaaactt
    29281 tgactaaaat cctattgcta actcgttgtt atcctgattg tttatataaa acaacggcag
    29341 gaatattcgc aacaaattac tttcgccacg aatcttcact gccgttataa ttttcttatc
    29401 aaccgttaca tccggtcaga ttttcattat tcgcttaaca acttctcaat ccctttacgg
    29461 aacttcgccc cttctttcag gttgcgtagt ccatacttca cgaacgcttg catatagccc
    29521 atttttttac cgcagtcgta gctgtcacct gtcatcagca tggcatcaac ggactgtttt
    29581 ttcgccagtt cagcaatggc atcagtcagc tgaatacgtc cccatgcacc aggctgagta
    29641 cgttccagtt ccggccaaat atcggcagaa agcacatagc gaccaacggc catgatgtct
    29701 gagtccagcg tctgcggctg atccggtttt tcgataaatt cgacgatgcg gctgacttta
    29761 ccttcgcgat ccagtggttc tttggtctgg atgaccgagt attcagagag gtcacccggc
    29821 atacgttttg ccagcacctg actgcggccc gtttcattga aacgtgcaat catggcagca
    29881 aggttgtaac gcagcgggtc ggcgctggcg tcgtcgatca caacgtctgg cagcaccacg
    29941 acaaatggat tgtcaccaat ggcaggtcgt gcacataaaa tggagtggcc caaacctaaa
    30001 ggttcgccct gacgcacgtt cataatggtc acgcccggcg gacagatgga ctgcacttcc
    30061 gcaagcagtt gacgctttac gcgctgttca aggagagatt ctaattcata agaggtgtcg
    30121 aagtggtttt cgaccgcgtt cttggacgcg tgagttacca ggaggatttc tttgatccct
    30181 gcagccacaa tctcgtcaac aatgtactga atcattggct tgtcgacgat cggtagcatc
    30241 tctttgggaa tcgccttagt ggcaggcaac atatgcatcc caagacccgc tacaggaata
    30301 actgctttta aattcgtcat tatttcatcc acctgtaaaa tggttgctga attatagctt
    30361 gttcgatttt tttcgccagc atcaattacc ctgaattgat tactgaatta cttgtgatgt
    30421 tacgccgctt cgttgtggat tgcagtagca ttgttcctaa gtatggctcc atttttccag
    30481 gaatggtcgc aaatctactc cccccgttcc ggcaatctaa agttaatctt ttccacatta
    30541 acaatatggt gattaatcct gtcgatatcg acggagcttt gccctctttc attcaccgca
    30601 tgaacatttg caagagatag tagtgtttct tttttcgcca taaagacgcc gcgaacgtct
    30661 ttgcgcatgt cgaagttcat gctcaatgct ggtccaacag aggattcctg catcacatta
    30721 atattacgca taaaaaggtg ttgtggtttg ttgtgtaact ccagcgacgc acgcttcatc
    30781 tcaatgttag tcagcgccac acaggagaca gcattcccgg cggagatttg gatgccgcgc
    30841 aatttataag caagatgggt gttatccagt tgaatattat tcactcggaa attttgcggt
    30901 atcgagagat atttgccttt aattacccca tagccgatta acatcccggc gctattaatc
    30961 atttcaatat tatcaatcac gaaattgtca caaccgtaaa tagcaactgt cgcgttatca
    31021 atacctgctt tcttactgaa atccggcgtg atattgcggg ctttgatatt acgaataaca
    31081 aaatgtttac cattttcaac atggatcagt tgccgacaat ccgatcccgt gatattcgcc
    31141 acgacaaagt ttttcactgc ctggtcttcc ggataattat tatcgtaggt acttcccgca
    31201 agacctatgc cgatgcccca gttgattttg ccgttggtac agttgatgcg ctcaataacg
    31261 tggtcagata tcaaaatatc actgtcgtta atcgccacgt tccattcaat ggcatcgccc
    31321 tgtaagtcgc tgaacttaca attggtgatg ttggcaccga taatctggtt atgaaatccc
    31381 tggcgtaaga tggcgtaatt agcgtggcta acggtcaggt tatcgatggt caggttgcgc
    31441 atgacctgtt tgtttttgcc gccgatataa atctgcgtta ccgggccaaa gccgctcata
    31501 gtcagccctt tgatggtgca gtcggaacca cgcacatcca gggtgatgtt atgcatactg
    31561 ccgccctcct cccctgtcac ctggctgccg tcctgtaaaa caaatcgccc tctgccgttg
    31621 ccgcgcaggc ttccaaggat gtgtaacgtt ttacctgcag gaatgaagat gccggtgttg
    31681 atattgtcgc aaaccaatcc gccaggcacg acgaccgttt gcccttcgct gaaggcttgt
    31741 ttaaatgagg cgatccagtc gtgagggttg tagtcgttaa tgttaacgct ttgtcgggcg
    31801 ggaagtgcgc gagcgaaagg ggtatggagg aaggcaagcg ccgagcttgc cgtcaggaag
    31861 gtgcgtcggg agagtttttt aaatggcatg cgttctcctc tataaagcct gcaacaagct
    31921 ggcgagttct cgattaatca cctgctggtt aaaatcgtgt tcgacttttt cgcgcgcacg
    31981 tttgacaacc gtagtaagtt cgtcggtgtc cagttggcta aacgccgcca gtcgttgcgc
    32041 cagtgcgcga gcatcgttct caggcaccag ccagccggat ttatcggcct ccaccagttc
    32101 cggtattccg ctatgcagag tagaaaccac cggaatgccg accgccatcg cttccatcag
    32161 cgccaccgga atgccttcca tatcgccgtc agcacccgtt accgatggca acagaaagac
    32221 atccgcatcg tcgagcatcg ccttcacttc gtggcttggt ttaaagcccg gcatctctac
    32281 cacatcctcc agttgatatt gttcgatgag cgtgcgcagg cgtcgttccc acgggccaat
    32341 gccgaggatg cgataacgaa atgccacgcc ctgctctttc aactgccggc aggcttcgat
    32401 cgccacatgc aggccttttt tctcggttaa gcgtgcgaca gatatgattt ccagcggcgt
    32461 tgcaggcgct tttaccggac gcgggctaaa gcgcgtcatg tctacaccca tgcgcgatac
    32521 ggcaattttt tccctcgggc agcccatttt ttgcagcctt ccggcccaca gttcgcttat
    32581 cggtagcatc aaatcgccac gacgaaacag ttgttgatat tcgggagtgt aatggttgag
    32641 cacttcccga ctggagatat caataccgtg gaagatagtg gcaattttgc cgcgaatgac
    32701 atccagttcg cgtagttttg ctgcggttac ccccgcaggg ccaaaatgag cgataaaaac
    32761 atcagcatga aacggtgttg cgacctggcc gcaaatggca gacaaaatca ggttccgcga
    32821 ctcagcacca tagcgtttga ggttgagcgc ctgccaggta tttttacgat gaatgccgcg
    32881 taaggtctgg ctggcgcggt agcgcagttt cgccactttg ccttgtggtt cgtcctgtaa
    32941 ccagcgagtt ctggcggcaa ggttatattt cgtccatgcc gcgtgggtgt tttgcgtatc
    33001 gcctttttgc agcgcgacaa tctccacctc aaagcccata tcaataaacg cagtgatttg
    33061 gttgagaacg aaggtttccg acgacagcgg aaatttcaat aagaagaagc cgaccttcat
    33121 ttcgcctccc cgatgcgctc aagcacagac tgcaccatcc gcattcccgt ctgacgctca
    33181 cgactgacgg cttcgttaag tcgcgcgttc agcgccggaa gttggcctaa ggtatccgca
    33241 accatcgctt gcaggctgcc gtccagtaaa tggcgaatat caatcgccat ctctggcagc
    33301 cccagttgtt gcataatccc ggcggatttg tgttcgtagt tgatggcaat tgccggagtg
    33361 gagaaattca tcgagataat ggcagagtgc aggcgcgtac ctacggtgag ttcacaggca
    33421 ccgaggattt tgcccatttc cagatcgttg agctcatcca tcaccacgtg ataacgggca
    33481 ggatcgctga tgtgctgacg caggttgagc gccaccatgc ggtcgtcttt gttatagctg
    33541 tcgatacccg tacaggtgga gagcgcaatc acctgatagc cttcgtcgag aatgcgattg
    33601 accaccccgg caaaggcttt ttcatacgct tcttgagtgg tgccgagacg tttgtcgaac
    33661 ggtgccagtt cgcgcagggt aattgccacc gctttctgtt gtgcggcaac atccagccag
    33721 tgttgaacag catagctggc ggtgaagtct tcaatgtggt gatcgaccag ccacgcggta
    33781 tcgacgccat tttcaacttt tgcggtagtg atattgctgc gtttcattag atccaggctg
    33841 accgattcgc gcaggatcag cgcgtcgcag tgaccgaata cgtagttcgc cagttggtta
    33901 aattgctcat cctggaacgg gccgacgctg tgaccaatca taaacagcgg ctttttcgcc
    33961 ataaacgtgc aaagcgcatg ttcaaactgc ggcacgccgt agagatcgac aaaaaacgat
    34021 ccgccgacct ggataatggc atcgtaacct gacagcaggc gcacaaagtc agtgaatccc
    34081 tgggcaatgg cgatattacg cagcttgccg gtgtcggtga cgcgtgagag caatacctgg
    34141 tgctggtagc ggcgacggag gacttttttt acgcgcccga caacgcccgc cgcgctgttg
    34201 tgttgtttca tttgcaggaa cagcggatcg cccattaccg gacggttgag cagccaggaa
    34261 gaactgaccg gatagcggct cattacgtcc acttcggcgt gtggattgag gatgttgatg
    34321 gcatcaagta agccgcgcaa gatggcgctg tcgccgcgat tgccgcaagt gtggttgccc
    34381 agaatcagta atttcatttt ttcctcataa atttgatgcc aagtgaggct gtgttttttg
    34441 tgttcgttgc cgctttttgc ctggcgcgtc ttatcaggcc tacaagtccc gagcacagag
    34501 ccgtaggccg gataaggcgt tcacgccgca tccggcaact attgccggaa ccgaaaacaa
    34561 ccattcaccc ggcccgcaaa agcattttca ttttttcgct gcgacaaaac tgacgcttca
    34621 cttccaccac cagcggatgg cgcgacaaca cgatcatcac cacaaacgcc agcacgcctg
    34681 cgataatttg caccgccagc agcatcccca gcgccagttg ccctttcagc acaatgccca
    34741 gcgcataact gaccaccagc gtcggcaacg agagataaaa cggcagccac aaactcagga
    34801 tgtactggcg ataactggaa ccaagaaccg gtttaatcat cacgaagtaa ctcagaatgg
    34861 tgttgataat ttgcaccagc aggaagccaa gcgtgacgcc gatcgcgccc gccatctgcc
    34921 caccaataac aatcgccgga ataaacagaa atgttttgaa tacgttgaat ttaaagctga
    34981 tatcgacccg cgctttcgcc atcagcagcg aaccaatcgg gttacccacg gagcgcagca
    35041 gacccacaat acacagcaat tgcagcaccg gaataatgct gttccacttt tcgccgaata
    35101 ccagcggtac gaagttattc gacaccacca tcagcccgag cagcgccgga aagttgataa
    35161 tccccaccac cgacagcagc ttgtagaagt tcacgcgcag cttttcggtg tcgtcctgaa
    35221 ttttggcaaa cgccggaaac aacacacggg tgatgattgg gttcagcttc atcggcggca
    35281 caacggccac gttgtacgcc aggttgtatc cccctgccac gcccgcgcca agaatacgcg
    35341 ccagcaccag cgttgaaagg ttggtgttga gatagttgat gatgctgtcc gccgtcagcc
    35401 aggcaccaaa acgtaagttc ggcgcaactg acgccagcga gaaatgcaga ccggggcgat
    35461 aaatttttcg accaaagtag ccaaacagca gcgttcttac cgcactattg accagataac
    35521 cgaggatcgc ggtcatcgcc agcggccaga aatgggcgct aaccaccgta aaagtgaagc
    35581 ccgccagcac cgcgctggtt tcgatcatgc cgattttgtt gaactccagt tccttttgca
    35641 tcaacgcgcg gaactgttgc ccgtggggga tcaccacaaa cgccagcgac aatgttttaa
    35701 tcaacggtgc caggtccggg ttattcagca cgtcaccaat ggcatcactc aacaaaaaca
    35761 ccgccacaca caccacgatc cccagcccga cgttcagcca gtacagcgtg gtgagttcca
    35821 ggtggctgat ttcttttcgc tgaataatcg agttagcgat accgaagtca gaaagcgtat
    35881 ctgccagcgc gatgatcacc agcgacacgg taagcaaacc gaactggtgg ttgtcgataa
    35941 tccgcgccag cacggtcatc tgcaccagcc cgaggccgat gatgatcacc gtagcaatcg
    36001 ccgaccactt tgcgccgctg atggtctttt cacgtaagct catatcaata tgccgctttg
    36061 ttaacgaagc ccttgaatac cgtcaggaaa acgattttga tatcgaacca gacgctccat
    36121 tcgcggatgt actcaaggtc gaactcgacg cgtttttcca ttttctccag cgtgtcggtt
    36181 tcgccacgcc agccattaat ctgcgcccag ccggtaatgc ccggtttcac cttatggcgc
    36241 agcatgtagc cttcaatgag ctggcgatac tgttcgttat gcgccaccgc gtgtggacgt
    36301 ggaccgacaa tcgacatccc cccggtcagc acattgataa actgcggcaa ttcatccagc
    36361 gaggtgcggc gcagaaagtt ccccactttg gtgacgcgcg gatcgttctg cgtcgcctgg
    36421 gtcaccactt tgtcgttctc catcactttc atggaacgaa acttccacac tttgatcggc
    36481 ttgccatcca tgccatagcg agtctggcgg aaaataaccg gccctggtga actgagtttc
    36541 accgccagcg caatacagca cagcaccggg gagatcagca acagaataag cgtcgccagc
    36601 acaatgtctt ccgcacgttt gagcaggcgg ttaaccccgg aaagcggcgt gtcgtaaagc
    36661 ggcaccaccg gaacgccgtt catctcttcg agacgtgaat ggagaatgtt gaaggtaaag
    36721 acatcgggga tcagcagcac cgaacaggtg gtatccgcca gttgatggac cagttttttc
    36781 actcgcgcgc cgtcgcacat ctgcatcgcg atatagacgt tatgaatttt gcccgctttc
    36841 gcatcctcga ccagctgttg cagattgccc gcccagtcgt tagaaacgcc gcccggtttc
    36901 gggtcgtggt aaacccccac cacttcaaac cctaaccacg gctgattacg gaagctctcc
    36961 atcagcattt gtccggcggc taaatctccc gctacggcga ccatacgctt gttatagcca
    37021 tgattacgca gccagcccgc cccaatgcga atacatgaac ggcaaaccac cagtccgata
    37081 ctggtcagcc cataccacgc cagccagatt ttcagttgcg tgtcgaaatc attgttgaac
    37141 gccaccagtc cggcgctgaa aatcacgctt aaggtccagt tttgtagcaa cagggcaaat
    37201 tctgtcgctg cccgaacacc gcgccatgag cgataaaaat cggtgatgcc gcccagcatc
    37261 tggaacacca ccagcgtaat caacgccacc aacaggtgca tgtagaggaa tgacagtccg
    37321 ctcacttcgc aaaccagcca tagtccggca aacatgatgg tgatatctga aaagcgttgc
    37381 accatagaga ttaacgatgc attggttttc gctcgctcgc gcttttttag atttgtcatc
    37441 gttgttcctg ttattagccc cttacccgca gtggggtaag ggaagatccg acattactca
    37501 ttcagcaacg tcagcagagt tcgcgttcgc gcttccatca gcggcacatc accgcgcgat
    37561 tccacattca accgcaccac cggttcggtg ttggaggtgc gcaggttaaa gcgccagtcg
    37621 gcaaaggtca tgctgatgcc atcggtacga tccaccgaca gcgcctcacg gctaaaatgc
    37681 tgttcgacgc gattaatcgc ctcaacgggt tgcgccagtt tgctgttgat ctcaccgctt
    37741 gccggaaacg ccgccatccg gtcgcgcacc agttcgccca gcgtttttcc tttcaggcac
    37801 accagttcgg ctaccagcag ccacgggatc atgccgctgt cgcagtaagc gaaatcacgg
    37861 aagtaatggt gagcgctcat ttcgccaccg tagatggcgt cttccttgcg catccgttct
    37921 ttaataaagg cgtgtccggt tttcgacatt accggggtgc cgcctgcggc agtcaccaca
    37981 tcaatagtgt tccaggagag acgcggatca tggatgatct tcgcgccggg atttttttcg
    38041 aggaacgctt ctgccagcag gccgacaatg tagtagccct cgataaactg ccctttttcg
    38101 tcaaacagaa aacagcggtc aaaatcgcca tcaaaggcaa tgcccatatc cgcgccgtgt
    38161 ttgatgaccg cattgcgggt gtcgtcgcga cattccggca gcagcgggtt aggaataccg
    38221 ttggggaaat tgccgtccgg tgtgttgtgt actttgatta attccacggg cgcgccgagg
    38281 gctttaaagc gggcttcaat ggcgtctacc accggacccg ctgcgccatt cccggagtta
    38341 atcaccagct tgagcggcgt gaggtttttg acattgatat aaccgaacag gtgatcaacg
    38401 taagcgtcac gcaggttgat ttgctgatag cggccgcgtt tggtttcatc gacgggagga
    38461 aagtcgttgg cttcagccag acgctggacg tcgcgcagtc cggtatcacc gctgatcggg
    38521 cgagcccctt cgcgcaccag tttcatgccg ttataatcca tcgggttatg gctggcggta
    38581 acttcaatgc cgccatccac gccgagatgg aacgtggcga aatagatctc ttcggtgccg
    38641 gacatgccaa tatccagcac atcgacgccc gcatcctgta aacctctcgc cagcgccagt
    38701 tttaaggttt cgctggtgag gcggacatca ccgcctaaca caatggtttt cggtttgaga
    38761 aattcgccat aggcgcgacc aatgcgccag gcgatatctt cattcagttc ttcgcctagt
    38821 tttccgcgaa tatcataggc tttaaagcag gttaattttt tcatatcgtt accctttttc
    38881 aggcaatagt tggccctgac cgaagcggcc aattttattt ttgtcgttat ttacaccgcg
    38941 gtttcgcatt cattgcctga tgcgacgctg ccgcgtctta tcaggactac aaacccgaac
    39001 cgtaggtcgg ataaggcgtt cacgccgcat ccgacaaaca gctcctgatg cgacgtttac
    39061 acccgtccgt agcgatccgc gaagcgcacc acatcatcct cttcgagata agagccggag
    39121 cgcacttcaa ttaaatcgag cggaattttc cccgggtttt ccaggcagtg cgtcgccccc
    39181 agcggaatat aaatggactc gttttcacca agcagtttga tatcaccatc aatggtgact
    39241 tttgccgttc ccgcgaccac tacccagtgt tccgcgcggt gatggtgcat ctgtaccgac
    39301 aagccctcgc ccggtttcac ggtgatgcgt ttcacctggt agcggtcgcc cgcgtcgata
    39361 gagtcatatt tgccccacgg acgatacact tcgcgatgca cccgatgctc atggcgacca
    39421 tcggctttga tctgctcgac cacttttttc acatcctgca ccgcgttacg gtcggcaatc
    39481 agcaccgcat ctttggtctg caccactacc agatctttca ccccgacggt ggtgaccagg
    39541 ccagattcgg cgtacacata gctgttttca gttttgtgat taatcacatc accgtggcaa
    39601 acgttgccct cggcggtgtg ggcgctgatc tcccataatg aagaccagga accgacatcg
    39661 ctccagcccg catccatcgg caccacaacg gcatctgccg tacgttccat gaccgcgtaa
    39721 tccaccgact cttccgggca ggcgagaaac gcttcttcat ccacgcgaat aaaatcgaga
    39781 tccggatcga cggcgctcat cgcttgttca caggcgtcga gaatatccgg gcgatatttt
    39841 ttcagttctt cgagatagcg tccggcgcgg aacaggaaca tgccgctgtt ccagtaatat
    39901 tcgccgcttg ccacataggc ctgggcggtt tccagattcg gtttttcgac aaactgcgcc
    39961 acttcaaagg ccaccgtatc ctgctcaccc gcagatactt caccgcgacg aatatagcca
    40021 tatccggttt caggtagatc cggcacaatg ccgaaggtca ccagcttgcc cgcttcggca
    40081 tacggcatgg cattacgcac ggcggcacgg aacgcgtctt catcggcaat cacatgatcc
    40141 gccgccaata ccagcattaa cgggtcgctc tccgggctat gacgttttgc cgccagcgcc
    40201 gccagtgcaa tggcaggtgc agtgttacgc cctgccggtt cgagaataat gttctcggtg
    40261 agtttgttca gttgacgcag ctgttccgcg acaataaagc ggtgctgctc attgcaaatc
    40321 accaccgggc tttcgcactc cacgccgttc aggcggcaga tggtggtttg cagcatggtg
    40381 agatcgcctt tcaggcataa aaactgcttg gggtaaagta cgcgggaaag cggccataag
    40441 cggctaccgg agccacctgc catcacaact ggatagagtt tcgactgcgc cataattatc
    40501 cccgaatatc atttataaat tgacgtaaca cgttctcttt atcgagtgtg cgttcggcat
    40561 attcacgtgc caccgtgttg tgtttgggca gcaggagcgc ctgacggatc cccgccacca
    40621 gcgcctcgac cgattccggt tctacgcaaa ccgcaatgcc cggaaaggtt tcgcaaagct
    40681 gccccagttc tgtgtgggcc tctgcggtaa tcaccgcgtt accgcctacc gccagaatat
    40741 tggtcagttt cgacggcaat acggcatctg ccgcgccgcg tttttgcacc accagatggc
    40801 aatcgcccat cttcagcagt gcgggtaaag cgtcatacga ttgcagcggg aaaaattgca
    40861 tgttgcgcag tccacgctgc tgcgccattt tttccagccg cgctttgccg ccgccctgcc
    40921 cgacaatggc aaaaatcagc ggttcatcgc gcagacgatc ggcagcttca ataacgtttt
    40981 ccagcccctg cttttcacca atattgccgg agtaaagaat gatttttttg ttatccggca
    41041 ggtcaagctg gttacgaagg gcgtcaacat cggcatctgc aacatgctga aaacgggcaa
    41101 tttccgacca gttggggaag aagatgacgt tttccgccgc cacgcctttt tcgatggctt
    41161 tattcatcat cgaacgcgaa atcgtggaga cgttatcgac gttatgcagt ccgctacgtt
    41221 cgaacgccgt tgccagctgt gccactttgc cgcctttgcc ttttccggca aggcccagcc
    41281 ccagcatggc gtccacttcg taatcctgaa tatgcagcac ggtacgcgca ccagagagct
    41341 tcgccagcag gcgcattccc ggcgtgcaaa acagcgttgg cactacgccg ataatgcgat
    41401 ccggcttcca gcgacgttgc gccatcagtg gaaagaaact gctgacggca aaactgccga
    41461 gatgcaacaa gcgtttcagg gtgctcggct gttttggcac gtacagcggg cagcgccaca
    41521 ccgtggcggc cccctcttct cgtttgtagc gccaggcgga atagttctca cccacctgcc
    41581 attgcgggta gtaaggcggt gcggtaatga cccgcacctc atgaccttgt gccgccagcc
    41641 attccaccat ctcgccggtg tatttgccga tgccggttaa ctccggcgag tagttaatgc
    41701 cgtagaccag tattttcata atccgggtac tccggctcgc ttctcagcga gaaaataggc
    41761 gcggctgtta gcgtgaacat cgttactggc gagcagcgcg tccggcgtca gccagcggta
    41821 atcgtcatgc tgctcatccg gcattaacag ctcttcttcc gctactctga agcgaaaacc
    41881 gagcaccaca tagtgagtgg tgaaatccgt gccggagaag ttatcgtcat aaaagtgctg
    41941 ccagacaccg taaaactggc ctgctgttat cggcagacgc agccccagtt ccgccatcgt
    42001 cagccgctca aatgcggctt ccagcgtttc gtctttctgc acgcgccctc ccggcacaaa
    42061 ccagtaaccc tgcgccgggc ggttggttct tttgccaagc agaaactcgc cgcgactgtt
    42121 ctcgacaata aagtcgagag agacaagcgg tgtggagcgc actacagtgg caaagtcttc
    42181 ctgacgtaaa aacatcattc cccccgaaag cggtcttgat tctcaaggaa ccactggtaa
    42241 gtgctggcaa gccccgcttc cagtgagatt tcgtgatacc agccaagctg atgcaggcgc
    42301 gtcacatcca gcagtttgcg cggcgtacca tccggtttgc tggcatcaaa aaccacccga
    42361 cctttgtaac ccaccacttt ggcgatggtt tgcgccagct cgcggatagt gcagtcaacg
    42421 cccgtaccaa cgttaatgtg cgacagcatc ggctgggtgt tctccagcca gacttcatgc
    42481 gccagctcca tgacatgaat gctcgccgcc gccatgtcat cgacgtgcag gaattcacgc
    42541 atcggtgtac cgctgcccca taccaccacg tccggcgcat tctgtgccgt cgcctcgtgg
    42601 aagcgacgca gcaatgctgg gatcacatgc gagttactcg ggtggaagtt gtcatgcggg
    42661 ccatacaggt tggtcggcat gactgagcgg taatcgcgtc cgtactggcg gttgtatgat
    42721 tcgcacagtt tgatcccggc gattttggca atggcgtaag gctcgttggt cggctccagc
    42781 gtgccctgca ataactcgct ttctgccatc ggctgttttg ccagtttcgg gtagatacag
    42841 gacgatccaa gaaacagcag tttgttcacg tcgttctgat gcgcggcgtg aatgatgttg
    42901 ctctcaatca tcatgttctg gtagatgaaa tccgccggat aggtgttgtt ggcaacaatg
    42961 ccgcccactt tcgccgccgc cagatagacc tggtcaatgc gttcgctggc aaagaaatca
    43021 tgcaccgcgc ggctgtccag caggttcagc tcgtcgcggg tgcgtaatac cagttccaca
    43081 tcaccgcgct gttcgagctg ccgcctgatg gcagaaccga ccattccgcg atggccagcg
    43141 ataaaaatgc gttgtctact catgcttatg actccagcgc gatcgccacg tcgtagccgt
    43201 gagatttcag cagagagtgt tttttcgccg cttcgaggtc attagccacc atttcagaca
    43261 ccatctctct gagggtgatt tccggtttcc agcccagttt ttcgtgcgct ttggtcgggt
    43321 cgccgagcag cgtttcaact tcagccggac ggaagtaacg cggatcaacg gcgataatca
    43381 catcacccgg tttaacgccc ggcgcgtcat gcccggtgac ggaaaccaca atgcccttct
    43441 cttcaacgcc cgtgccttca aagcgcagtt tgatgcccag ctgtgctgcc gccatttcca
    43501 cgaactgacg cacggagtac tgaacgccgg tcgcgataac gaaatcttcc ggctgttcct
    43561 gttgcagcat catccactgc atttttacgt agtctttggc atggccccag tcacgcaggg
    43621 aatccatatt gccgaggtac aggcacgact ccagcccctg ggcgatattg gcgattgcgc
    43681 gggtgatttt gcgggtaacg aaggtttcgc cgcggcgcgg ggattcatgg ttgaagagaa
    43741 taccgttaca ggcgtacatg ccgtaggatt cgcggtagtt aacggtgatc cagtaggcgt
    43801 acagtttggc gacagcatac ggagagcgtg ggtagaacgg cgtggtttct ttctgcggaa
    43861 tttcctgcac cagaccatac agttcagagg tggaagcctg atagaaacgg gttttctttt
    43921 ccagaccgag gaagcggatc gcctcgagca ggcgcagcgt acccatcgca tcgacgtctg
    43981 cggtatattc cggtgactca aaagaaaccg caacgtggct cattgcgccc aggttgtaaa
    44041 cttcatccgg ctgcacttca cgcaaaatgc gtgtcaggtt ggaggtatca ctcaggtcgc
    44101 cataatgcag atggaatttc gggttgcagg tgtgcggatc ctgataaatg tgatccacgc
    44161 gctcggtgtt gaatgacgat gcacgacgct taataccatg cacctcgtaa cctttttcca
    44221 gcagaaactc tgccaggtaa gaaccgtctt gtccggttac accggtgatg agagcgactt
    44281 ttgacatgtc ttattcctct gtattttttg aatttattca gtttcaacgc gttcgcgtat
    44341 caccactgcg ggattccccc ggcaaaccac atttgccgga agcgttttaa aaacactgct
    44401 tcgtgcaccc acgacggtgc cgtcgccaat cgtgacgcca ggggcaacaa aaacatcggt
    44461 tgccagccag catttctcgc caatcacaat aggcgtagca ttaatggtga aatgttgact
    44521 tgcatggtcg tggctaccgg tgcataaata acttttttgc gatatcaccg aatgtgcgcc
    44581 aatggttatt tcaccgaggg tatataaatt gacgtcatcg ccgacccacg cgtaatcacc
    44641 taaggttaat ttccacggat aggtaatttt tactgacgga cgaataacta cgttttttcc
    44701 tatttttgcg ccgaataaac gtaataaaaa tgcccgccag cgatacaata cttgtggcga
    44761 ccaggcaaat attgttgcct gtactgccca ccataattgc actttaatag cgttgccgcc
    44821 ccggaaccct ttcggcaccg agaaaccgct taaatcttgc attggttctc cttatattca
    44881 gactttgtta tataaggctt tcgtctttga ggtagtacgt tggcgtaaat gccaggataa
    44941 ttcagcccaa aagccaggta catgtaatat ttgtcgttgg acttttttcg cgtcagcaca
    45001 caattccata ttattggtgg tagatacccc acccatggaa aattcagaca ccaggccatt
    45061 gagtttttta aatgcataac cggctttata cattttggct gccagcgcgt agtcggaaga
    45121 aactttatat tccaggtcat aacgccattt tttcaagccg gatacaggga aaaatatcgc
    45181 ctgatgactg gcgggcaggc tgtgataaat ataccagccc ggtttggcgc tacgtttaat
    45241 tttatgcccg tcgccaaaat ccagcagcgc atcgccggtg atcatcatgt tatctttttg
    45301 catttttaac ttacggacaa aatttgcggc atcctgatga aaaatatcgc ccgaattgag
    45361 aaacaacgcg aacttgcctt gtgccatcgt aatgcctttg ttcatggcgt cgtagatacc
    45421 gttatctggc tcgctgacaa agcgtaggtt atagatacca ttgagatttt ccagatactc
    45481 acgggtgccg tcattggaac cgccatcgac aacaatccat tcgaagctga tatcttccgc
    45541 ctgcgccaga tgcgccagcg aggcatgtgt tttgactatc ccttcgaggt tacgaaacgc
    45601 gacagtgatt atgctaagca acatgttctt attcttacct cgtaatattt aacgcttttc
    45661 gcaaaataaa cggacagacg attaaaaatg catattccgg gctaaatatc gaaccggtaa
    45721 aaaacagcga taccggagta aaaagatata attgcacgcg aaaattgcgg ttatcaccaa
    45781 aagcgttgat catcattttt atcactttcc ccatgtacca cagcgataaa aacactgcga
    45841 accaggaaaa ataaataatc agcagataca aaccattgtc tatggttttt ccgacatccg
    45901 caccgttaaa tattccgaat gatgcgacgt attcataaag tgagccaaat ctgactacac
    45961 cgtcaatatg ggtcaaagaa taaccgacca tcaccagcgg accgacaata cgataatacg
    46021 atgacgatcc ttccgtacct aaatcgccca gacgggtgga aatataagga aacgcgatta
    46081 ccacaccaac caggaataca gccagagaaa tcaatgccaa cggtaacttt ttcttaatcg
    46141 cctctttatt cagatattga aatgcccact ccagcaaata aaacaggata aaggtcataa
    46201 cccctgaaaa cgatccggat aatattatcc ctgcgagaat catagcatcg gttttaggcg
    46261 ttttgatacc aaactgtttg atgctgagcc aaattgagat taatgccaga gcgaaaaatg
    46321 ccggttcgaa ataaagtgct gtcgtgcgct tgccgccgaa tttaatgaaa ttcagtacat
    46381 agctgttgct gtaaatcaga tatttcgaaa tcgactccat aatactgctg ccaccggtga
    46441 ggataatttg cgccatctcc accaccgcca gcgccaccac cagcccgacc accagataaa
    46501 agaaacgtaa tatcttgcga tggttgtgtg gcgaaatcgt tttaaagcga atactccaca
    46561 ccatgccaat aatgatcaca atatagacaa acagcatggt tgatgtgacg tatttactgg
    46621 catccaacga ctgaccaaac agatagttga acgccgtgag tcccgcacca atccctaagg
    46681 caatcatcaa ttttttaacg ctgatgcgtt ctaaaaacag cagtaacaag acaggtaaaa
    46741 aagtgacgat agtgatgggg aaactttcac caagctgggc gattttgacg ttaaccagca
    46801 ggtagatcag cggcagcagc aggtagctac agattctgat agaagttgac atactcctcc
    46861 agcatctgtt gtccactgta ggcggcgcgg ctgcgttggc tgaactcagc cagcgtggta
    46921 ccaaatatcg cctgcgcgat ttccggtttg cttaactgaa ccagttgcag cacgtcttct
    46981 tcgctgacag tttttcctcc ggatttttgc agcacttccc gcgccgcatc gctatgggtg
    47041 gcgatcaccg gcacaccaat cgatagcgcc tcacacaaaa tcagcgggta gttatcgaca
    47101 cgagaactga acaccagcgc atccatctga ttgagcgcgc tcatcaactt gcgcttgtca
    47161 gtttcaaagc cgtgattaac cacgttgcca gcggtgaacg gcgagaactt accaaaggta
    47221 tgcagttcga ttttgtcgcc cagcgccatc atctcacgca ccagttgctg gttagttttg
    47281 ccgtcgtaac gcaggtcatg cgccaccacc gcgattttcg gcttgccctg ggtttcgcgc
    47341 accggaggca gatccgccag aatcgcttcg gttgccatat caatgccatt attgataatc
    47401 cggcaacgcc ctggaccgta caggctattg aaagcatcag ccacatgctg gctgggggaa
    47461 ataaactgac agcccagcgc cagcatctca cgaaataact ggcgtttgcc cgccaccagc
    47521 tggtgcgcgc gatcaatctt caccggcgga tagttattta aggtcgggca tttctggcaa
    47581 cccgttttcc agccttcgca accgtcggta aaggcgcagc gcccggttac actccagtga
    47641 tcgtgcagcg tccagaccac agtgacgtcc ggtttatggt ttttcacttt ttcgcaaaag
    47701 cgcaccacgc tcttaagatt tagccagtag ctgtgcagca catgaaaatg caggaccacc
    47761 ggacccggtg tgcgagtaat ggtgcgatat aactcattga aattgccaaa cagatcgcga
    47821 ttaaacagac gaaacagtgc aatgttcgcc atcgcggtca tccgcggcgt atgtttgatt
    47881 acctgcggat agttttgatg gctgacgctc tctttgccgc ctttgccgta gccgtagaca
    47941 aaatgtgacg ccagcccctg ttgcagcgca cgctggtgga gatctaacgc cacacctgcc
    48001 gctccgcctt ccgccagtcg cacattaaat tgcagaatat tcatttaatt accttcactc
    48061 gcgctttttc tcccaccacc agcgcgttgt ccgggacaga gtcgagcacc acgctgcccg
    48121 cgcccacggt gacgttgtta ccaagcgtga tatcaccaag aataatgacg ttggcaccga
    48181 gttcgacgcc gttgccaatg tgtggacatg ccatgttatc ggcaccacga ttgccgatag
    48241 tgacgccgtg gcgaatggta aaatcatccc ccgcaaccac gtttttattg atcactacgg
    48301 cgtaaccgtg atggatagta aagcggcggc caatggttgc ggctgcctgg atttcataac
    48361 cgaaaaagca ttcggtgata atgcgataca gcaccagcag cggtgccgcc cacagattgt
    48421 tgaggacgtt ctttttgcgc cacaccgaac aaaaatgagc aacacgatag gcaagaacca
    48481 tgcagcacgg gcgtaaactc cagctgttgg cgcgcagatc ttccagcatc tttagcgccc
    48541 ccgaatacca tcagccagac gtttgccgtt acgcaccgac agcagcgtca acaaggtgcg
    48601 ccaggtcatg cgtttattac ggatctggta gagggtaaac agctgatatt ttttgcttgc
    48661 acggtcaaat ttatctttgt gctttcggta aaagtggaag tacccggaga attttttcgg
    48721 tgacgaggtg atctgcattt caccgtgatt gatatgcagg atctgcgtcg cttcttccac
    48781 tttccacggt tcgccgtact ccaccaccat ccgcaggaag atgtcgtaat cctgtgctgc
    48841 tttcagttcg gtatcgaaca aacactcttt gaaacgccat gcccaagtaa agacctgatt
    48901 gccaatgata ttgcgtttat agaacaggcg gcgtgaatac ggcgatttgg gatatagcgg
    48961 caaacttgct ggttgggaat agacttcgcc ctggcaaacg tagtcgttag cgtacaaaaa
    49021 ggcgtgagtg accagttgct gtttatgggc gaggaagacg ctcagacggt tgggtgtcca
    49081 ttcgtcatcg tcatcaatcc cggtgatgta ttccccttgc gccagcataa tcgcctggtt
    49141 acgtaccgcg cacgccccgc tgttaatgtc gttgtgaatg taggtgatac gcggatcgtt
    49201 gagggcagtg acgtactgtt gcagttgttc ccaggaggtg gagcaatcat ccacgatgat
    49261 catctcccag ttgctgtagt cctggcgcag gaccgatttt atcgcccgaa tcgccagttg
    49321 ttggcggttc caggtcggca tatagattga aatcagcgga ttgtctttca taggttgttc
    49381 tcccggagtg tcgagatgtt ctgccggttt ataagcttgt ttacgggttc tgttgccgga
    49441 tgcggcgtga gcgccttatc cggcctacgg agctggtttg cttgccggat gcggcgtgaa
    49501 ggtaggtcgg ataagatgcg tcagcatcgc atccgacagc ggatgtcgtt atttcgcatc
    49561 cgacttatat tcgtattcgt aatagccata atcctgatac gcgctggcgc ggcggaagat
    49621 ggagttcaga atcacccctt tcaccggaat accattttgc tcaaagcggc tcagactggt
    49681 ttccacttct ttcaatgtgt tgaccgcata acgcgccacc attaacgtgg ttccaacatg
    49741 acgaccaaca attgccgcat cggtcactgc cagaatcggc ggcgtatcaa tcaacaccag
    49801 gtcatagttt ttactcgccc agttcaccag ttcggcaaag cgttcgctca tcaacagttc
    49861 agaaggattt ggcggcacct gaccgcgcgg gatcaggtca aatttggcaa tagaggtcgg
    49921 tttagcagcg gtagtaatat cgccctgacc aatcagaatt tccgacaggc cattaacgtt
    49981 attagtgccc agcagctcgt gggtgtagcc tttgcgcata tcgcagtcga tcaacaacac
    50041 ccgtttattg gtctggctga tcaccgccgc caggttggcg cagacaaagg ttttaccgat
    50101 tgacgggcta accccggtca tcatcaacac attgttctgt gcctgcatca tcgcgaagtg
    50161 caaactggta cgcagactgc ggatggcttc aatcgccaga tcggttggat tccccatcgc
    50221 cagtagctgg ctctgtttat agcgtttaat ccctttgatg gttttgacgc tatcgcgcgc
    50281 tttctgccat tccgaaagcg ggatgctggc atagacgctg ataccgtgtt cttccagcac
    50341 ctgcgggctt tcgatgccgc gattaaacaa cgagcgcagc agcacaccca cgatagaaag
    50401 catcaggccg aggataatcg ccccaaggat aatcagctct ttcttcggtt tcagtacacc
    50461 tggctgggtg attgccgggt caacaatgcg cacatcgccg acggtgctgg cctcggtgat
    50521 tttcagctcc tgctctttat tcagcagttg catatagacc tgctgaccag actcgacatc
    50581 gcgggtcaga cggacaatct cctgctgggt tttcggcatc gccgttacgc gaccgttaag
    50641 tttggctttt tcgtcttcca gcgcctgacg tttctccagc agcgtgcggt acgccgggtg
    50701 aactttggtg tacagcttgg agatttccgc ctctttaaag gtcagttcgt tcaactgggc
    50761 gtcgatgttc accatcgaat cgagcaccgc tttcgcttcc agcggcagat caacagaatc
    50821 tttatcctga cggaaggcat tcagtttgtt ttcggcaaca tcaaggcggc tacgtacttc
    50881 cggtaactgt tgcgcgagga aagcgaggct tttcgacgct tccgccgatt tgcgctcaat
    50941 attttgttcc tgatagttac gggcgatgct gttaagaatg tcgcggatct gttcgcgatc
    51001 ttcaccggta taagtcaggc tcagtacgcc tgcgtctttg ccgttctccg ttaccgtcag
    51061 gctgttttgc agttgattga tcatccccag cgtggagtat ttggtgacgg taaactcact
    51121 gcccgggcgg gcgtgaatgg cttcaaccat cagcgtgacg ccttcttttt tcagcatctg
    51181 gcccgcttgt ccacgggcgc taaagccgcc atcactgctc agggtgtagt ttttatcgtc
    51241 cagcacatta agcgtaaaca cctgatccgc catctctttc gggcggttaa aggtggtcac
    51301 tttcaccgtc tcgttctgac gtcccatcaa acgatcccag cccgcaccga aaatcgggaa
    51361 cgtgtttttg ctcaccgcaa tatcgaggtc gagatcgtcc accgttttac caagcaccag
    51421 acgcgaacga atcaactgga tctcggcgtc cgatgcaggc ggtttgttgg ctaatgccga
    51481 accaatgtcc tgcactaacg aattgccgct gttttgctcg atttgtacca gtgcgtcggc
    51541 actataaatc ggcgtggcga agaaggtgta aaccacggca cagagggcaa atacagcggt
    51601 gatgccaatc acccaccagc gcgcttcaat gacggtgccg accaggcgac caatatcgat
    51661 ttcatcactg cccgttaccg gagcggcatg ttgttttact ttttctgtca ttcttatacc
    51721 tgctctgcgt tcaatgcctg cgcccactgg cgggcagacc gttcaagtaa tgtgtacacc
    51781 gctgcaaacg tttcccggct tttgcgatac ggatcgggga tttcacattc gttatcccag
    51841 tgaccaaaca gcatcacttt gccgcgcatc tcaggtgcca tctcgcataa gcgttcgata
    51901 tggcgctttt ccatggtcaa aatcaggtcg tagttgcgac acagacggcg gctgatttgc
    51961 cgtgcacagt gaccttccag agacagttga tgttctgcgg cgatgctgat agcagtaggg
    52021 tcagcgccct taccgaccag cgcgccgagt ccagcggact ccactttcag ctccgggtga
    52081 taacgttgca gtaagcgttc cgccgtcggg gagcggcaaa tattgccgac acagacaact
    52141 aagatgttgt taaacatgac gattaccagt tatgaatgtc gctggctgta tccgtcatgt
    52201 aacggacacc gctaatagtt ggcagcaact gattgatcag acggttccag cgggaaaccg
    52261 gggcggtggt gacatacacc acgtcataag gttgcaggcg gaattctgtc gccatcacca
    52321 gcgacgtggc atcggacata tccagctggt agatattggc aatcttgccg ttacgcccgc
    52381 cctcgccttt cagcggacga atgacaaaga tgccgctggc gttggaggtg gtcatgtcga
    52441 taccttcagc attacccagg gcttcagtca gggtcatgcc gctaaagtcc attttcaggg
    52501 tgctctgttt cttcacttca cccatcacaa atactttcag atcatcatta cgcggcacgt
    52561 agagaatatc gccgggataa agcagtcggt tctgattgag gtcgccgttt tgcatcagca
    52621 cctgcaaaga aatgcgttct tcacgaccat tgtgtgttag caccacgttg cgccagtcag
    52681 cggtgtcggt caggccacct gcggcgttga tggcgtcgag aatggtcagt ggtacgttgg
    52741 tgatcgcctg ttgaccggat ttattcacct gacctgagat ataggtcttt tgtgagcgga
    52801 aggcggcgat attaacgtcc acctgcgggt cagcgatgta cgtcgctaag cgcccggtaa
    52861 tatcactgcg gatttcagcg agcgttttcc cgactacgtg aaccttgccg atatacgggt
    52921 aaaacatagt gccgtcaggc tgtacccagt tgccggtgtc gctggagctg cggtactgac
    52981 cagctggcgt ggtgagttcc gggtgatccc agacggtgac attaagaacg tcccccggcc
    53041 cgacgcgata ctggtaattc gcgatctcgc tttccagcgt catattgggg cgcgctacat
    53101 tcgggcgtgg gcgtaattgg tcaatcaggc gcggggtcag cggataaaca ttcaccattt
    53161 tgtcgagatc gaaatcagcg tcctgctgtt tgatgacgtc tttgcccatc gtcgacatat
    53221 tgctgcccgg aagtactgtg caaccgctta tcaaggttac tgacaccaat aatggcatca
    53281 atttcatttt ggatttcatc attgtttatt tatcactttg gcagagtaat tatcctgtgc
    53341 actattaata gcaatgtcgc catgcacatt taccttgcag ttaattgaat acaaatttaa
    53401 ctggcatcag tcctaaaaaa attgatttca tccgcaggct attgacagaa taattcagac
    53461 tggtctttca ggcatccaga cacgctaccg cccctggctt tttagccacc aatacactga
    53521 tttagcttaa ttttttaaac cctctctgca tacaatcgtt gatgagaaag ggttattgcg
    53581 gaaattaact tccgaatata aggtgacatt atggtaattg aatattggct ctccaataat
    53641 gcaggaggaa gtgttacagc taacggaata gcaggcaagg taacaattcg gcaattggct
    53701 atttttaaga attatattaa gtgtcattca atatggtttt taggagtttc tttaggttga
    53761 caatatttaa tattgcgcct ccgcatgcga tatttcttaa ataatgtttt attattacca
    53821 cttttaattc agggataatg tgaggttatt accctcaaat aatatgagat aaatagtgct
    53881 gcaacattgc atttttgccc cgatttatcc atgatcgaat tgtgacattt gtcatacaac
    53941 gaataggttt tgtacttact atggaatgga ttgccgatcc gtctatctgg gccgggttaa
    54001 tcacgctgat tgtgatcgaa ctggtcctcg gcattgataa cctggtcttt attgccatcc
    54061 tcgccgaaaa actaccgccg aagcagcgcg accgcgcacg ggttaccggg ctgttgctgg
    54121 cgatgttaat gcgcctgtta ctgctggcgt caatctcctg gctggtcacc ctgacgcaac
    54181 cgctgttcag cttccgctcg tttaccttta gcgcccgcga cttaatcatg ctgtttggtg
    54241 gtttcttcct gttgttcaaa gccacgatgg agctgaacga acggctggaa gggaaagaca
    54301 gcaataatcc cacacaacgc aaaggtgcga agttctgggg ggtggtgaca caaattgtgg
    54361 tactggacgc catcttctca ctcgactcag tgattaccgc cgtcgggatg gtcgaccatt
    54421 tactggtcat gatggccgcc gtggttatcg ctatcagcct gatgttgatg gccagcaagc
    54481 cgttaacgca atttgttaac agtcacccga ccatcgttat tctctgctta agcttcctgt
    54541 tgatgattgg ctttagcctg gtggcagaag gtttcggctt cgtcattccg aaaggctacc
    54601 tgtacgctgc cattggtttc tcggtaatga tcgaggcgct caatcagttg gctatcttta
    54661 accggcgacg ttttctttcc gctaaccaga cgctacgcca gcggactacc gaagcggtaa
    54721 tgcgcctgct tagcgggcaa aaagaagatg cggaactgga cgccgaaacc gcgtccatgc
    54781 tggtggatca tggtaaccag cagatcttta atccgcagga acggcggatg attgagcggg
    54841 tacttaatct taaccagcgt actgtcagca gcattatgac gtcgcgccac gatattgagc
    54901 atatcgatct caacgcgccg gaagacgaga tccgccagtt gctggagcga aatcagcata
    54961 cgcggctggt ggttaccgac ggtgatgacg cagaagattt gctcggtgtt gttcacgtta
    55021 tcgacctgct acaacagtca ctgcgtggcg aaccgctcaa cctgcgggtg ttgattcgcc
    55081 agccgctagt gttcccggaa accttgccgt tgttacctgc cctggagcag ttccgtaatg
    55141 cccgcacaca ctttgctttt gtggtggatg agtttggctc ggtggaaggg attgtgacat
    55201 taagtgacgt cactgaaacc attgccggta acttaccgaa cgaagtggaa gagatcgacg
    55261 cccgccatga tattcagaag aatgcggacg gttcctggac ggcgaatggt catatgccgc
    55321 tggaagatct ggtgcaatat gtgccgctgc cgctggatga aaaacgtgaa tatcacacca
    55381 ttgccgggct gttgatggaa tatttacagc gtattccaaa acctggcgaa gaagttcagg
    55441 tgggggatta tttgcttaaa acgttgcagg tggaaagcca tcgcgtgcag aaggtgcaga
    55501 ttattccgct gcataaggat ggcgagttgg agtacgaggt gtgatggtat cggtcatttt
    55561 acccaatagc cgaaaggaat aagatgaggg aaccgcgcca gcggcgattt accgccggga
    55621 gcccgggttg ccagggtggt ggcgattgag cccccctggc acgttcaccg gcttgagcgt
    55681 tccatagtag cgaggaacat caagtgaacg gaacagcctt cgatcttaca tattcagaat
    55741 ataatgatgc cgccacgaac gcctgatgcg acgctttacg cgtcttatca ggcctacagg
    55801 acaggtcacc aggtaaccta catcttctcc agcaacttct tcacatcttt gccattgcgg
    55861 gaatctttat tccgctcggc ccagtcattc agacgacgtt tcgcttcgtc ctgtagatgt
    55921 ttgcgcagta actgatccac ttgcagactg taattgagtt gctgccagtt gccataaacc
    55981 cgcagcggta ctggcgtttc tttaaggaaa tcaatcagtt tgctttcccc gttccagcca
    56041 cccacgaccc gaatatcaaa ctgggtgtcg caggtttgct ccgccagatt caacgtacca
    56101 gccccggaaa gcgccagcac aggcgattga ccttgcatgt cgtttaacgt cacgacgcca
    56161 tccttcaacg tcaaatcggt ggtaaagcgg tcaagacgcg ttacgttatc gaagttttca
    56221 gcggccttca catcaccacc attacgttct accgcttgct gaatcatctg ctggaagttc
    56281 atcccttcca tgcgcgtgtc ggtcatttcg acatgtgcct gtccttgcca gttgtggcgg
    56341 aatgcgtcgg catctatgtc agcaccggag aaatcaccag ccagtgacat ctttccggtc
    56401 aacgaaatcg gatagttaaa cgccttcaga atggtgccaa tctcaacgtt ttccagccgt
    56461 ggctggaagt ttatccgcgg atttattgat gtcgcgtcca gcgtgcccgg cagtgaaacc
    56521 tgtccaccgt taagcttgcc ctgcagttga gtaatttcca gcaaacccga cttgttggtc
    56581 atttgcgtgg caacatctgt aaaattcatt ccgcgccagc gcacgttact ggcctgcaac
    56641 aaaatatcag ccgtaaagcc ttgcagtccc tgatatgccg gttcatcaat acgcgaagaa
    56701 atgaccgggc gcggcaacgt tgattggctc tgcccctgct gcgcggcacc gttttcacca
    56761 ttcgctgttt cattaagcgg gatgaggttg tcaagattca gttgcgggaa ttgcagtctc
    56821 agctgccatt ccggtttctc tgtcagcgtg acctgtgctt gcccgctcag cgtactgtca
    56881 ttggcggtca aactaatttg gttaaatgaa aggcgtttat gtgactcctg ccactgggcc
    56941 tggaaactcc cctgcccatg aataccttgt tttggtaaat ctgcaccctg caactgccag
    57001 ttaatttgtt caatagccgc cgttaaatca tgcggataat cagaagcatc taccgtaccg
    57061 ttaagggata tcgtgagatc gcgctgatcg cgattaaccc gcccggagaa ctcaaatgaa
    57121 ccacgatgtt ggggatcttg ttccatttgc aggcgaatat tgcggattgt cacctgctcg
    57181 tcatcttcat gctggaacac cagcacgctg tccgccacct taagactgga tatatcaaac
    57241 gaccatccgc gatcgtctga cagatccggc aaggtattgt cgcgcggtgc aaccggagcg
    57301 tcttcactgc gcaccacttc cgtctgcggc gtcagttgga tcactgcccc ttttagcatc
    57361 acctgcttaa cgctcagttg atgactcagt agtggtaaaa gcgccacgtc cagacgcatg
    57421 ttgtcggcgc gaaccagtgg ctggctcgcg ccctgggcgg tgagagacat tcgcccggag
    57481 aggatactaa gctgcggcca gacgtgccaa cgcagtggcc cgtcgagctg caattgataa
    57541 ccgctacgtg cagcaacttg cttgaccata tagttgcgga aatcattcgg attcaccagc
    57601 aacactaacg cagataaccc ggccaccagc acgaccagga gtatcatcag cgtcgtcaga
    57661 aatcgtctca tggtatcctc aatgggcctg aattagtctt tatcgattcg gctggctacc
    57721 gcgccctgct ggttgcgata tttcgcatct tcacggcggt tgtaaggtcg cgccgccggg
    57781 ccggaaagcg gctcaaagct cagcgcacca attaacatgc ccggacgcag cgccagcggc
    57841 agcttaccgg agttgtagaa ctccagcaca atgcaaccag accagcccgg atcgatacgg
    57901 tgcgcggtga cgtgcaccat cagccccaga cgcgccaaag aggaacgccc gtccagccag
    57961 cccaccagat cggctggcag cgtcaccgac tccagcgtca ccgccagcgc cagttctcct
    58021 gggtgaagat agaacgcctc gccctcgtcg agaacgatct catcgctcat cacgcggtca
    58081 agcgcggcgc tcacttcatc tttgggaccg ctcagatcga taaacgctgc cgtgtgacca
    58141 cggaaggtac gaaatttatt gcccaggcgt acatccaccg tcgcgccgtt aatacgctcc
    58201 actggcggac gtgggttgat cgacaaacgg ccttcatcaa gccaggcttc aatatctcgg
    58261 tcacacagac gcatggcatt ttctcctttc gcgcatcact cccttaacgc caattacgtc
    58321 aagggcatac caggttatca ctgaacggta cacaatttat caagcttatt caaagaactg
    58381 acttattttc gctttcaata tatcgatcgc gatgcggttt ttcccgccgc gcggcacgat
    58441 aatgtccgca tattgtttag aaggctcaat gaattgcagg aacatcgggc gcacggtttt
    58501 ttgatattgc gccatcacgg aatccattga acgcccacgc tcgttaacgt cacgcttgat
    58561 gcggcgcatc aggcagatat ccagcggggt atcaacgaaa atggagaagt taagttcgtc
    58621 acgcaaacgc gcatccgtca gcaacaaaat gccttcgaga atgatgacct tcttcggctc
    58681 aaccgtcacc gtttctttca tacgcgtatg ttcaacatag ctgtaaaccg gcaggtcaat
    58741 tgccgagccg cgtttcaacg cttgtaaatg ctcaagcagc aggttgtgat ccatcgcgct
    58801 gggatggtcg tagttggtct taacgcgttc ttccatcgac agatggcttt gatctttgta
    58861 atagcagtct tcgggaatta cgccgatgtg ttcatcaccg acttgctcac gtaattcacg
    58921 ataaagggta ctggcaataa gactcttgcc ggaagccgat gcgccagcga taccgataat
    58981 gacgcactga tgagactgat cagtcatata tttagcgacc tgattaacct ggatgttagg
    59041 aagggggcga cgaagcgcca aacgcggcaa ttatagggat ttcatccgcc tgataccagt
    59101 cgaatagcgt tgccgcgcgc tcagagttaa ttgttgacaa agaattcccg gtggcaaatt
    59161 acgttgatca gttttatgta aggtaaaaaa tgttatacgc agttgcgcaa attatccgcc
    59221 tttacgtcac tttatgagca attcacatat aaaatgtaaa acttttgtac tagcataaac
    59281 acagaaacga atactggcga cctggtcttg cggataaagc ggtaatgagc aaacaatcac
    59341 agcatgtatt aattgccctg ccccacccac tgcttcacct ggtcagttta ggtttagtct
    59401 cgtttatctt tacccttttc tcgcttgagc tttcgcagtt tggcacccaa ctcgccccac
    59461 tgtggttccc gacgtccatc atgatggtgg cgttttatcg ccatgccggg cgcatgtggc
    59521 cgggaattgc gctgagctgc tcgctgggaa atatcgccgc atccatcctg cttttttcca
    59581 ccagctcgct gaacatgacc tggacgacca tcaatattgt tgaagccgtg gtcggggcag
    59641 tgctgctacg taaattgctg ccgtggtata accccttgca aaatctggct gactggctgc
    59701 gtctggcatt cggcagcgcc attgttccgc ctctgttagg gggtgttctg gttgtcctgc
    59761 tgacgcccgg agacgatcct ctcagggcat ttttgatatg ggtactgtca gaatccatcg
    59821 gcgctctggt actggtgccg ctgggattgt tatttaagcc acactatctg ctgcgccatc
    59881 gcaacccacg gttacttttt gagtcactgc tcacattagc catcacgctg acgttaagct
    59941 ggctttctat gttgtacctg ccgtggcctt ttactttcat tattgtgctg ttgatgtgga
    60001 gcgccgtgcg cctgccacga atggaagcct ttttgatctt ccttaccacg gtgatgatgg
    60061 tgtcgctgat gatggccgcg gatccctccc tgcttgctac gccgcgtacg tacctgatga
    60121 gccatatgcc gtggctactg tttttgctga tcctgctgcc cgccaacatc atgaccatgg
    60181 tgatgtatgc ctttcgtgcg gaacgcaaac acatttccga aagcgaaacc cgctttcgga
    60241 acgcgatgga atattccgct atcggtatgg cgttagtggg caccgaggga caatggctgc
    60301 aaaccaacaa agcgctctgc cagtttctcg ggtacagtca ggaagagctg cgcggactca
    60361 cctttcagca actgacctgg ccggaggatc tcaataaaga tctccaacag gttgaaaagc
    60421 tgataagcgg tgaaataaac acctattcaa tggaaaaacg ctactacaac cgtaatggcg
    60481 atgttgtctg ggcgttgctt gccgtctcac tggtgcgcca cacggatggc acgccgctct
    60541 attttatcgc tcagattgaa gacattaacg agctaaaacg caccgaacag gtgaatcagc
    60601 aactgatgga gcgcatcacg ctggctaacg aagcgggcgg gattggcatc tgggagtggg
    60661 agctgaagcc gaatattttt cgagctgtat gaaattcctc cgcatatcaa accgaactgg
    60721 caggtgtggt acgagtgcgt gctgccggaa gatcgccagc atgccgaaaa agtgattcgt
    60781 gattcgttgc aatcacgctc gccctttaag ctggaatttc gcattaccgt aaaagacggt
    60841 attcgccata tccgcgccct cgccaaccgg gtactgaata aagaaggcga agtcgaacgc
    60901 ctgctcggca ttaatatgga tatgaccgag gttaaacagc ttaacgaggc attgtttcag
    60961 gaaaaagagc gcctgcacat tacgctggat tccatcggtg aagccgtggt ctgtattgat
    61021 atggcgatga aaattacctt tatgaatcca gtggcggaga agatgagcgg ctggacgcag
    61081 gaagaagcat taggtgttcc gctcctgacg gtgttgcata ttacttttgg cgacaacgga
    61141 ccattaatgg agaacattta cagtgccgac acctcacgtt ccgcgattga acaagatgtg
    61201 gtgttgcact gccggaacgg cggcagttac gacgtgcatt acagtattac gccgttaagt
    61261 actctggacg gcagcaatat aggctcggta ctggtgattc aggacgtcac cgaatcacgc
    61321 aaaatgctgc gccagctgag ctacagcgcc tcccatgatg cactgacgca tctcgccaat
    61381 cgcgccagtt ttgagaagca actgcgtatc ctgctgcaaa cggtaaacag tacacatcag
    61441 cgacatgccc tagtgtttat cgatcttgat cgctttaaag cggtgaatga cagcgccggg
    61501 catgcggcgg gtgacgcttt actgcgcgaa ctggcgtcgt tgatgctgag tatgctgcgc
    61561 tccagcgacg tgctggcgcg actcggtggt gatgaatttg gtctactgtt gccagactgt
    61621 aatatcgaaa gtgcgcgttt tatcgctaca cgcattatca gtgccgtgaa tgattatcac
    61681 tttatatggg aaggccgtgt gcatcgggta ggtgccagtg ccgggattac cttgattgat
    61741 gacaacaatc atcaggcggc agaagtgatg tcgcaggctg atatcgcctg ttatgcctcc
    61801 aaaaatggtg gacggggccg ggtgacggtt tacgaaccac agcaagctgc cgcacatagc
    61861 gaacgggcgg cgatgtcgct tgatgaacag tggcggatga ttaaagagaa tcagttgatg
    61921 atgatcgccc acggtgtcgc ttcgccgcgg atcccggaag cgcgtaattt gtggctgatt
    61981 tcacttaagc tctggagttg cgaaggcgag attattgatg aacaaaaatt tcgtcgtagc
    62041 ttcagcgatc cggcacttag ccatgctctt gaccgacggg tattccacga atttttccag
    62101 caggccgcaa aagcggttgc cagtaaaggc ataagcatcg ccctccccct ttccgttgcc
    62161 ggtttgagta gcgccacgct ggtgaatgat ctgcttgagc agctgggaaa tagccctcta
    62221 ccaccacggt tattacatct gattattccg gctgaagcga ttttagatca cgcagaaagc
    62281 gtgcaaaaac tgcggctggt gggatgtcgg atagtgctca gccaggtggg ccgcgatctg
    62341 caaatcttca actcgctgaa agcgaatatg gcagattacc tgctacttga tggtgagtta
    62401 tgcgccaacg tgcagggtaa tttgatggat gagatgctga ttacgattat tcaggggcac
    62461 gctcagcgac tcgggatgaa aaccatcgcc gggccagtcg ttttaccctt agtgatggat
    62521 acgctttctg gcatcggcgt cgatctgatt tatggtgatg tgattgccga tgcccaaccg
    62581 ctggatttgc tggtgaatag cagttatttc gcgattaact gagagagcgt ttgcccattg
    62641 cctgatgcga cgtatcaggc ctacaattcg tccgttccgt ctggttgcca gccttccgta
    62701 taccagatat gcaacagcgc ataagaacgc caaggcttcc agcgctcggc ataacggcgg
    62761 atttgtgccg gtgtcatccc cggaaatcgc tgtttaatca gataatcatc cggcagaaaa
    62821 acatctttcg cctgccagcc acgcaaagcg aaataattcg ccgtccagcg cccgataccc
    62881 ggaaaagttt gcagcgtttt catcgcctgc tccacatcgc ccggaattgt cattggtaag
    62941 ctgccctcca gcgccgcatt tgccagatga atcagtgcct ctgcccgttt caacggcatg
    63001 cctaacgctt ttaatgcctg cgggtcggct gctgccagcc gctgaggcgt ggggaagcag
    63061 atatactccg gaaaatcatc cagccgttcg ccataaagct gtacaacttt ggcagtcaat
    63121 tttgccgcca tcgccacgct caccagttgg cctaaaatcg cccgcacacc ctgctcaaaa
    63181 gcatcaatac agccgggtaa acgcaatccg ggccgcgccg cgcctaactt gcccaacgca
    63241 ccgttaacaa tctgcgggtt acattgcaga tcaaacaggc ggctcatttt cgccagacac
    63301 tcagcggcaa cgggttctaa acctgcactt aaatttatgt gcagagtatg gcgggctata
    63361 tccggaatag cagtcaccac gccgcgatat tcgcccaccg ccagactacg ggcataataa
    63421 tcgtcagcga ccgtttccac accactcact gcacgggcgg cgagaaatcc caacatccac
    63481 gaccagtcat acggcggctg ccagttcagg gtatacatcg catctcctta ttcatccgct
    63541 ttcagcataa acgttattca gacgctacgc tttgctttca tattccggtt gtcgcgacgg
    63601 caacatttcg ctaaagtcac gccccttctt caccggcatg gggattattt cgtgtttatt
    63661 ggttttgatt acggtacagc aaactgttca gtggcggtca tgcgtgacgg taaaccgcac
    63721 ttgctaaaaa tggaaaacga cagcacgctg ctgccttcaa tgctttgcgc gccaacgcgt
    63781 gaagcggtaa gcgaatggct gtaccgccat catgacgttc cggcagacga cgatgaaacg
    63841 caggcgttgt tacgacgggc gattcgttat aaccgcgaag aagatatcga tgttacagcg
    63901 aaaagcgtgc agttcggtct ttcctcactg gcacagtaca ttgatgatcc agaagaagtg
    63961 tggtttgtga aatcaccaaa atcgttcctc ggtgccagcg gcttaaaacc gcagcaggta
    64021 gcgctgtttg aggatctggt ctgcgcaatg atgttgcaca ttcgccagca ggcgcaggcg
    64081 cagctgccag aagcgattac tcaggcggtg attggtcgcc cgatcaactt ccaggggctg
    64141 ggcggcgatg aagcaaacgc ccaggcgcaa gggattctgg aacgcgcggc gaagcgtgcc
    64201 ggattcaggg acgtggtatt ccagtatgag ccggtcgcgg ctgggctgga ttacgaagcc
    64261 accttgcagg aagaaaaacg ggtgctggtg gtggatatcg gtggtggtac gactgactgt
    64321 tcattgctgc tgatgggacc gcagtggcgt tcgcgtctcg atcgtgaagc cagcctgctg
    64381 ggtcacagtg gttgtcgtat tggcggtaac gatctggata tcgccctggc gtttaaaaac
    64441 ctgatgccac tgctgggtat gggtggcgaa accgaaaaag gcatcgccct gccgatcctg
    64501 ccgtggtgga atgcggttgc catcaacgac gtacctgcgc agagtgattt ctacagtagt
    64561 gccaacggtc gtctgcttaa cgatctggta cgcgatgccc gcgaaccgga aaaagtggcc
    64621 ctgttacaga aagtctggcg tcagcgttta agctatcgcc tggtacgcag cgcagaagag
    64681 agcaaaatcg ccctttcaaa cgctgcggaa acccgcgcct cactgccgtt tatcagcgat
    64741 gaactggcta cgctgattag ccagcaaggg ctggaaagcg ccctcagcca gccactggcg
    64801 cggattctgg aacaggtgca actggcgctg gataacgccc aggaaaaacc ggacgttata
    64861 tacctgaccg gcggtagcgc ccgttcgccg ctgattaaaa aggctctggc agaacagttg
    64921 ccgggcattt cgattgcagg cggcgatgac tttggctccg tcaccgccgg gctggcacgc
    64981 tgggcggaag tggtatttcg ttaaaagaaa atggctcagc agcggcttaa atctgcctgc
    65041 gcctgagcca gtttttctgc cgcctgacgt aacggttcca tcaacggcat ggtccgtgct
    65101 ggagcataaa ggcggaatcg ctgcaactct gtcgcgccga cagtcaacgc cgattccagc
    65161 cgatgtcgtt tggcggccat taccgcctgt ctgtctgctg gcgttaccgc ttcgttcggc
    65221 ctgaacacaa aacggcggtc acagctcgct ttccagtcga taaccgcctg ggtcagatgg
    65281 tcgccaaacc ctttaacttg cttaacgcca cgacgggtaa catccgctgc tgtttcaata
    65341 ccaaaagacc gtaacgccgc tttacgcgca gggccaacgc cgggaataga ggcaaaaaat
    65401 ccctccagaa acttctgctt ctgccgttcc cttgcggtgt cataaagtgc tgccagagcg
    65461 cgtttctcct cttccggtaa cccgagaatt tcgtccttca ttttttcgag catcgcccgt
    65521 ttggcgataa aaccttccag cccgcccaac tgttggatct ggctgactaa atgctcatag
    65581 tccattttcg cgcgattaaa tgcctcacgg cgttgctgga tttctgcttt gtacgctttg
    65641 cttgtcagac tgccaataat ccagatagcc gacagcacag gaaccaaaat aatataacgc
    65701 ggttctgcct gaaggccgca aagcaacagc gataacgctg acagtgcgat ctcaatcaga
    65761 atgatgtatt cgcgccgtaa caggcctaaa ggaagcggcc tgccagtcgg ttggaaatga
    65821 tcgggtaatg gcaattgcaa tgctggcggt gctactgacg ccatcaccat cgcccagact
    65881 ttcgccagca caaaatcacc gctggtggta atgacctctt caccgagatc aacaaaatag
    65941 ataacgcctt gattatccag cgtacaccac gggcagtcgg tcaaatgagc gggataaaca
    66001 tgcattgccg aaacgggaca tttctttaac tgttggcgca gagaatcaag tgccgctacc
    66061 cacgctttag ccgtcggacg cccggttgcc acgccacttt ccgtgaatgc ctgctgaaac
    66121 atggcttcaa catcactcgg taacatcgat agcggaatcg atcgtggcgg cggttttaaa
    66181 ccacgtcgct gattatctga cgcgtaggca taacggaaat gggtaatatc cgtctccagc
    66241 gcattacccg catcagagat aagcggcaca ccagaataag gatgccggcc accaaacaag
    66301 acgtgaaaaa tcagcaacgc aaggccaaaa ttatcgtgat tttctgtgcg ttcaaagccg
    66361 acaaatgacg acaaggtttg tagctctggc ggcgtaaaat gcgacacgcc gacttcgcat
    66421 aaatgcagtg tgccattgac gttaatctga aaggagtcgc tatcaatcag taccactttg
    66481 ctgtcgcgac ctaccataaa actgttctgg tttacgtcac ccacgacgtg cccgtgctcg
    66541 tgaaccgtag caaaagatga agcaatattg cgcgcaacat agagtagaaa atcccacgca
    66601 caatgagggt aactctggcg acgatgtgcc gggctataga tcatatgaat cggttcttta
    66661 ccagaaactt ttggcatcat aaaaccgata acttttccgc ctcgtccacc gtgaagcgtt
    66721 gcctgcggcc aggcgacata attcaacaac tgcgcgtcag ctgtcgcagc cataaaggca
    66781 agtttgtcct gttttgaggc gggtggcggc gtgtgataaa tcttggcgac gctatcgaca
    66841 aactcctcga tatcataaac cgcgccttca ccgcctttgc ccagttcacg gcctggcgta
    66901 acgcactcac cagtagcagt atataaagtg ggtttcatgg taaccacagc gccagtgcca
    66961 acgttttatc atcatccgta cgctcgttta ccgccgggct ggacaaaaac tgctttaaca
    67021 attcaggtaa taaatcgagt tgttcctgcg ttactgacgc cagtccattg aaaaacgggg
    67081 taaagaaagg cacatgagga gaattatcca gcatatttaa cgccagccgc tgaataccat
    67141 ccgtaaatgc tgcaacttta tgcgcacgcc cagtgctggt gaaagtttcc agtctggaaa
    67201 cggcatcttc gtcggtaatg aagtgcgtca tgttggcata ttcacccacc atcggcgtga
    67261 gaggcaattg cagaccgtga cccaaatcta ccaccacgcc gccatcgcca atctgcataa
    67321 tcaaggtgcc gtcaggcgat gaaatcaatc ccagaaacgt gcaggcaaaa tcgcgaactg
    67381 ctaatgcttt ggcttctgcc tcggcaaaaa gtcgttgacg aatagtcagt accatatttg
    67441 tggcgaggac atcattaagc cccaattcac cgtcctgtac tttttgcacc ataaacgcca
    67501 tcgcttcatt gacggcgagc gtcgcgcctt ctcctccctg cgaaacgcta cctgcgccat
    67561 cagcaaggaa catcaccagt aatggttgct ggtcgtttaa ccagacaacc tgcatctggc
    67621 aggcatcctg acaaggcaaa tcagcactaa tgtgcgatgt tccaacagcg gatgcataaa
    67681 ccagacgcca gctcacactg acgtccagcc ttttggcgct tccagcacaa cttccgttcc
    67741 cggcgtggag cgggaaaccg aacgcagcga actggataac cagctaaaca gttcacggaa
    67801 ttgtaatccc tgcagtggca aaggctgacg aacgctgatt tgtgccagag tcttcatatc
    67861 cgccccctga acaccgatgg aaaagaaggc aaacttctta tcttcttccc cctgaaacac
    67921 tttgttggcg gcagcctgcc actcatcggt tggagcgcca tcggtgatca ggaaaatcca
    67981 cgggcgataa tacgaaatac catttgcgcg gtactcacgt ttcctctctt caaccatatc
    68041 tagggctttg gtaatggcgg cccccatagg cgtatccccc tgggcaaaca ggatgggcgg
    68101 gaaaaagtta gcggcgctgg taaagggttg ttccacatgc accgggccga acgtcacaat
    68161 gccgagttcc actcttttta aagccagcgg atcagcaagc agttcatcac gaaaggtaac
    68221 caatccggcg ttaagttcat taataggtct gccgctcatc gagccagaaa catccagcag
    68281 caaaatgcag gggcaacgtg gttccgggtt actggcaaaa tcgctggtgg caaacgtgat
    68341 ttgttcgctc ataagaaatc ctttcttaga gaattatcga ggtccggtat cataccgatt
    68401 gcaataatga aataagagca aacgaagaaa ctttcagaat taggcccgtc ggcgcagaaa
    68461 attttgctat tcgcctcgca agaacggaga gccgtcgatt gacactaagg gcggagtgac
    68521 ataatttcag gagtgagggt tagggagagg tttccccctc cccctggtgt tcttagtaag
    68581 cctggaagct aatcactaag agtatcacca gtatgatgac gtgcttcatc ataacccttt
    68641 ccttattaaa agccctcttc tccgggagag gctttcccgt ttcagcgtcc cgctgaaatc
    68701 atcggcttac ctcctttcgc cctgaatgca gtctatcgct aacgcgtgaa taaaatagtt
    68761 tcctctgtga ttattgcgta acgactcgca aagaatattt gctggcagga tcgcagacta
    68821 caaagcctac
//
LOCUS       DADMJE010000005        66347 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.005, whole genome shotgun sequence.
ACCESSION   DADMJE010000005 DADMJE010000000
VERSION     DADMJE010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 66347)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 66347)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..66347
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.005"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(128..607)
                     /gene="folK"
                     /locus_tag="JN001_000297"
     CDS             complement(128..607)
                     /gene="folK"
                     /locus_tag="JN001_000297"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HAY9051640.1"
                     /translation="MTVAYIAIGSNLASPLEQVNAALKALGDIPESHILAVSSFYRTP
                     PLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQDRVRKAERWGPRTLDLDIMLF
                     GNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELAFPDGETLREVLHTRAFDELSKW"
     gene            complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JN001_000298"
     CDS             complement(604..2022)
                     /gene="pcnB"
                     /locus_tag="JN001_000298"
                     /EC_number="2.7.7.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000174652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polynucleotide adenylyltransferase PcnB"
                     /protein_id="HAY9051641.1"
                     /translation="MTLPRCTIFTRVANFCRKVLSREESEAEQAVARPQVTVIPREQH
                     AISRKDISENALKVMYRLNKAGYEAWLVGGGVRDLLLGKKPKDFDVTTNATPEQVRKL
                     FRNCRLVGRRFRLAHVMFGPEIIEVATFRGHHEGNVSDRTTSQRGQNGMLLRDNIFGS
                     IEEDAQRRDFTINSLYYSVADFTVRDYVGGMKDLKDGVIRLIGNPETRYREDPVRMLR
                     AVRFAAKLGMRISPETAEPIPRLATLLNDIPPARLFEESLKLLQAGYGYETYKLLCEY
                     HLFQPLFPTITRYFTENGDSPMERIIEQVLKNTDTRIHNDMRVNPAFLFAAMFWYPLL
                     ETAQKIAQESGLTYHDAFALAMNDVLDEACRSLAIPKRLTTLTRDIWQLQLRMSRRQG
                     KRAWKLLEHPKFRAAYDLLALRAEVERNAELQRLVKWWGEFQVSAPPDQKGMLNELDE
                     EPSPRRRTRRPRKRAPRREGTA"
     gene            complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JN001_000299"
     CDS             complement(2061..2987)
                     /gene="gluQRS"
                     /locus_tag="JN001_000299"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414686.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HAY9051642.1"
                     /translation="MLPPYFLFKEMTDTQYIGRFAPSPSGELHFGSLIAALGSYLQAR
                     ARQGRWLVRIEDIDPPREVPGAAETILRQLEHYGLHWDGDVLWQSQRHDAYREALAWL
                     HEQGLSYYCTCTRARIQSIVGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGII
                     HADEKLAREDFIIHRRDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLF
                     GWKVPDYIHLPLALNPQGAKLSKQNHAPALPKGDPRPVLIAALQFLGQQVEAHWQDFS
                     VEQILQSAVKNWTLTAVPESAIVNSTFSNASC"
     gene            complement(3024..3479)
                     /locus_tag="JN001_000300"
     CDS             complement(3024..3479)
                     /locus_tag="JN001_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding transcription factor
                     DksA"
                     /protein_id="HAY9051643.1"
                     /translation="MQEGQNRKTSSLSILAIAGVEPYQEKPGEEYMNEAQLAHFRRIL
                     EAWRNQLRDEVDRTVTHMQDEAANFPDPVDRAAQEEEFSLELRNRDRERKLIKKIEKT
                     LKKVEDEDFGYCESCGVEIGIRRLEARPTADLCIDCKTLAEIREKQMAG"
     gene            complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JN001_000301"
     CDS             complement(3657..4361)
                     /gene="sfsA"
                     /locus_tag="JN001_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HAY9051644.1"
                     /translation="MEFSPLLQRATLIQRYKRFLADVITPDGRELTLHCPNTGAMTGC
                     ATRGDTVWYSTSDNTKRKYPHTWELTQSQSGAFICVNTLWANRLTKEAILNESISELS
                     GYSSLKSEVKYGAERSRIDFMLQADSRPDCYIEVKSVTLAENEQGYFPDAVTERGQKH
                     LRELMNVAAEGQRAVIFFAVLHSAITRFSPARHIDEKYAQLLSEAQQRGVEILAYKAE
                     ISAEGMALKKSLPVTL"
     gene            complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JN001_000302"
     CDS             complement(4376..4906)
                     /gene="thpR"
                     /locus_tag="JN001_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414689.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HAY9051645.1"
                     /translation="MSEPQRLFFAIDLPAEIREQIIHWRATHFPPEAGRPVAADNLHL
                     TLAFLGEVSAEKEKALSLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQL
                     ANMLRSQAARSGCFQSNRPFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFA
                     RGRTRYTPLKRWALMQ"
     gene            4980..7409
                     /gene="hrpB"
                     /locus_tag="JN001_000303"
     CDS             4980..7409
                     /gene="hrpB"
                     /locus_tag="JN001_000303"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414690.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HAY9051646.1"
                     /translation="MSSLPVAAVLPELLTALDCAPQVLLSAPTGAGKSTWLPLQLLAH
                     PGINGKIILLEPRRLAARNVAQRLEELLNEKPGDTVGYRMRAQNCVGPNTRLEVVTEG
                     VLTRMIQRDPELSGVGLVILDEFHERSLQADLALALLLDVQQGLRDDLKLLIMSATLD
                     NDRLQQMLPEAPVVISEGRSFPVERRYLPLPAHQRFDDAVAVATAEMLRQESGSLLLF
                     LPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLATNIAE
                     TSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGICLH
                     LIAKEQAERAAAQSEPEILQSDLSGLLMELLQWGCSDPAQMSWLDQPPTVNLLAAKRL
                     LQMLGALEGERLSAQGQKMAALGNDPRLAAMLVSAKNDDEAATAAKIAAILEEPPRMG
                     NSDLGVAFSRNQPAWQQRSQQLLKRLNVRGGEADSSLIAPLLAGAFADRIARRRGQDG
                     RYQLANGMGAMLDADDALSRHEWLIAPLLLQGSASPDARILLALPVDIDELVQRCPQL
                     VQQSDTVEWDDAQGTLKAWRRLQIGLLTVKVQPLAKPSEDELHQAMLNGIRDKGLSVL
                     NWTAEAEQLRLRLLCAAKWLPEYDWPAVDDESLLATLETWLLPHMTGVHSLRGLKSLD
                     IYQALRGLLDWGMQQRLDSELPAHYTVPTGSRIAIRYHEDNPPALAVRMQEMFGEATN
                     PTIAQGRVPLVLELLSPAQSPLQITRDLSAFWKGAYREVQKEMKGRYPKHVWPDDPAN
                     TAPTRRTKKYS"
     gene            7605..10127
                     /gene="mrcB"
                     /locus_tag="JN001_000304"
     CDS             7605..10127
                     /gene="mrcB"
                     /locus_tag="JN001_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glycosyl
                     transferase/transpeptidase"
                     /protein_id="HAY9051647.1"
                     /translation="MAGNDREPIGRKGKPTRPVKQKVSRRRYEDDDDYDDYDDYEDEE
                     PMPRKGKGKGKGRKPRGKRGWLWLLLKLAIVFAVLIAIYGVYLDQKIRSRIDGKVWQL
                     PAAVYGRMVNLEPDMTISKNEMVKLLEATQYRQVSKMTRPGEFTVQANSIEMIRRPFD
                     FPDSKEGQVRAHLTFDGDHLATIVNMENNRQFGFFRLDPRLITMISSPNGEQRLFVPR
                     SGFPDLLVDTLLATEDRHFYEHDGISLYSIGRAVLANLTAGRTVQGASTLTQQLVKNL
                     FLSSERSYWRKANEAYMALIMDARYSKDRILELYMNEVYLGQSGDNEIRGFPLASLYY
                     FGRPVEELSLDQQALLVGMVKGASIYNPWRNPKLALERRNLVLRLLQQQQIIDQELYD
                     MLSARPLGVQPRGGVISPQPAFMQLVRQELQAKLGDKVKDLSGVKIFTTFDSVAQDAA
                     EKAAVEGIPALKKQRKLSDLETAIVVVDRFSGEVRAMVGGSEPQFAGYNRAMQARRSI
                     GSLAKPATYLTALSQPKIYRLNTWIADAPIALRQPNGLVWSPQNDDRRYSESGRVMLV
                     DALTRSMNVPTVNLGMALGLPAVTDTWIKLGVPKDQLHPVPAMLLGALNLTPIEVAQA
                     FQTIASGGNRAPLSALRSVIAEDGKVLYQSFPQAERAVPAQAAYLTLWTMQQVVQRGT
                     GRQLGAKYPNLHLAGKTGTTNNNVDTWFAGIDGSTVTITWAGRDNNQPTKLYGASGAM
                     SIYQRYLANQTPTPLNLVPPEDIADMGVDYDGNFVCSGGMRVLPVWTSDPQSLCQQSE
                     MQQQPSGNPFDQSSQPQQQPAQQEQKDSDGVAGWIKDMFGSN"
     gene            10347..12536
                     /gene="fhuA"
                     /locus_tag="JN001_000305"
     CDS             10347..12536
                     /gene="fhuA"
                     /locus_tag="JN001_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrichrome porin FhuA"
                     /protein_id="HAY9051648.1"
                     /translation="MARSKTAQPKHSLRKIAVVVATAVSGMSVYAQAAVEPKEDTITV
                     TAAPAPQESAWGPAATIAAKHSATATKTDTPIEKTPQSISVVTNEEMQMHQFQSVKEA
                     LGYTPGVTVSSRGASNTYDFVIIRGFSSVGLNQNNYLDGLKLQGNFYNDAVIDPYMLE
                     RVELMRGPTSVLYGKSNPGGIISMVSKRPTTEPLKEIQFKMGTDNLFQTGFDFSDALD
                     DNGEFSYRLTGLARSTNEQQKNSESQRYTIAPSFSWRPDDKTNFTFLSYFQNEPETGY
                     YGWLPKEGTVEPLPNGKRLPTDFNEGASNNTYSRNQKMVGYSFEHGFNDTFTVRQNLR
                     FSEMKTSQKSVYGTGIAGDGHTLNRGTVVDNERLQNFSVDTQLESKFATGDVEHTLLT
                     GVDFMRMRNDINASFGSAPSIDLYNKYHPEYFAFGSAEPYQMNESKQTGIYVQDQAEW
                     NKWVFTLGGRYDWSKQATTVRENSYTPTEGYIERNDHQFTWRGGVNYLFDNGISPYFS
                     YSQSFEPSAFDLWSNPRISYKPSKGEQYEAGVKYVPNDMPVVVTGAVYQLTKTNNLTA
                     DPTNPLAQVPAGEIRARGVELEAKAALNANINLTASYTYTDAEYTKDTNLKGKTPEQV
                     PEHMASLWGDYTFNEGPLSGLTLGTGGRFIGSSYGDPANTFKVGSAAVMDAVVKYDLA
                     RFGMAGSSLAVNVNNLLDREYVASCFQTYGCFWGAERQVVATATFRF"
     gene            12587..13384
                     /gene="fhuC"
                     /locus_tag="JN001_000306"
     CDS             12587..13384
                     /gene="fhuC"
                     /locus_tag="JN001_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe3+-hydroxamate ABC transporter ATP-binding
                     protein FhuC"
                     /protein_id="HAY9051649.1"
                     /translation="MQEYTNHSDTTFALRNISFRVPGRTLLHPLSLTFPAGKVTGLIG
                     HNGSSKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYLPQQLPPAEGMTV
                     RELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLVDSLSGGERQRAWIAM
                     LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYL
                     VALRGGEMIAQGTPAEIMRGDTLEMIYGIPMGILPHPAGAAPVSFVY"
     gene            13384..14274
                     /gene="fhuD"
                     /locus_tag="JN001_000307"
     CDS             13384..14274
                     /gene="fhuD"
                     /locus_tag="JN001_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter
                     substrate-binding protein FhuD"
                     /protein_id="HAY9051650.1"
                     /translation="MSGLPLISRRRLLTAMALSPLLWQMNTAHAAAIDPNRIVALEWL
                     PVELLLALGIVPYGVADTINYRLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVW
                     SAGYGPSAEMLARIAPGRGFNFSDGKQPLAMARKSLTEMADLLNLQSAAETHLAQYED
                     FIRSMKPRFVKRGARPLLLTTLIDPRHMLVFGPNSLFQEILDEYGIPNAWQGETNFWG
                     STAVSIDRLAAYKDVDVLCFDHDNSKDMDALMATPLWQAMPFVRAGRFQRVPAVWFYG
                     ATLSAMHFVRVLDNAIGGKA"
     gene            14271..16253
                     /gene="fhuB"
                     /locus_tag="JN001_000308"
     CDS             14271..16253
                     /gene="fhuB"
                     /locus_tag="JN001_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-hydroxamate ABC transporter permease
                     FhuB"
                     /protein_id="HAY9051651.1"
                     /translation="MSKRIALFPALLLALLVIVATALTWMNFSQALPRSQWAQAAWSP
                     DIDVIEQMIFHYSLLPRLAISLLVGAGLGLVGVLFQQVLRNPLAEPTTLGVATGAQLG
                     ITVTTLWAIPGAMASQFAALAGACVVGLIVFGVAWGKRLSPVTLILAGLVVSLYCGAI
                     NQLLVIFHHDQLQSMFLWSTGTLTQTDWGGVERLWPQLLGGVMLTLLLLRPLTLMGLD
                     DGVARNLGLALSLARLAALSLAIVISALLVNAVGIIGFIGLFAPLLAKMLGARRLLPR
                     LMLASLIGALILWLSDQIILWLTRVWMEVSTGSVTALIGAPLLLWLLPRLRSISAPDM
                     KVNDRVAAERQHVLAFALAGGVLLLMAVVVALSFGRDAHGWMWASGALLDDLMPWRWP
                     RIMAALFAGVMLAVAGCIIQRLTGNPMASPEVLGISSGAAFGVVLMLFLVPGNAFGWL
                     LPAGSIGAAVTLLIIMIAAGRGGFSPHRMLLAGMALSTAFTMLLMMLQASGDPRMAQV
                     LTWISGSTYNATDAQVWRTGIVMVILLAITPLYRRWLTILPLGGDTARAVGMALTPTR
                     IALLLLAACLTTTSTMTIGPLSFVGLMAPHIARMMGFRRTMPHIVISALVGGLLLVFA
                     DWCGRMVLFPFQIPAGLLSTFIGAPYFIYLLRKQSR"
     gene            complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="JN001_000309"
     CDS             complement(16288..17568)
                     /gene="hemL"
                     /locus_tag="JN001_000309"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HAY9051652.1"
                     /translation="MSKSENLYSAARELLPGGVNSPVRAFTGVGGTPLFIEKADGAYL
                     YDVDGKAYIDYVGSWGPMVLGHNHPAIRNAVIEAAERGLSFGAPTEMEVKMAQLVTEL
                     VPTMDMVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHADCLLVKAGSGALTL
                     GQPNSPGVPADFAKHTLTCTYNDLASVRAAFEQYPQEIACIIVEPVAGNMNCVPPQPE
                     FLPGLRALCDEFGALLIIDEVMTGFRVALAGAQDYYGVVPDLTCLGKIIGGGMPVGAF
                     GGRRDVMDALAPTGPVYQAGTLSGNPIAMAAGFACLNEVAQPGVHETLDELTTRLAEG
                     LLEAAEEAGTPLVVNHVGGMFGIFFTDAESVTCYQDVMACDVERFKRFFHMMLDEGVY
                     LAPSAFEAGFMSVAHSMEDINNTIDAARRVFAKL"
     gene            17793..19214
                     /gene="clcA"
                     /locus_tag="JN001_000310"
     CDS             17793..19214
                     /gene="clcA"
                     /locus_tag="JN001_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="H(+)/Cl(-) exchange transporter ClcA"
                     /protein_id="HAY9051653.1"
                     /translation="MKTDTPSLETPQAARLRRRQLIRQLLERDKTPLAILFMAAVVGT
                     LVGLAAVAFDKGVAWLQNQRMEALVHTADNYPLLLTVAFLCSAVLAMFGYFLVRKYAP
                     EAGGSGIPEIEGALEDQRPVRWWRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGR
                     MVLDIFRLKGDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAV
                     FIGVIMSTIMYRIFNHEVALIDVGKLSDAPLNTLWLYLILGIIFGIFGPIFNKWVLGM
                     QDLLHRVHGGNITKWVLMGGAIGGLCGLLGFVAPATSGGGFNLIPIATAGNFSMGMLV
                     FIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVVVELFPQYHLESGTFAIA
                     GMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSEILA
                     RTLAKQEAEQLARSKAASASENT"
     gene            19238..19303
                     /locus_tag="JN001_000311"
     CDS             19238..19303
                     /locus_tag="JN001_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051654.1"
                     /translation="MAIIIGLEFAQLPMSFGAKYE"
     gene            19296..19640
                     /gene="erpA"
                     /locus_tag="JN001_000312"
     CDS             19296..19640
                     /gene="erpA"
                     /locus_tag="JN001_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HAY9051655.1"
                     /translation="MSDDVALPLEFTDAAANKVKSLIADEDNPNLKLRVYITGGGCSG
                     FQYGFTFDDQVNEGDMTIEKQGVGLVVDPMSLQYLVGGSVDYTEGLEGSRFIVTNPNA
                     KSTCGCGSSFSI"
     gene            complement(19687..20310)
                     /locus_tag="JN001_000313"
     CDS             complement(19687..20310)
                     /locus_tag="JN001_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HAY9051656.1"
                     /translation="MLVYWLDIVGTAVFAISGVLLAGKLRMDPFGVLVLGVVTAVGGG
                     TIRDMALDHGPVFWVKDPTDLVVAMVTSMLTIVLVRQPRRLPKWMLPVLDAVGLAVFV
                     GIGVNKAFNAEAGPLIAVCMGVITGVGGGIIRDVLAREIPMILRTEIYATACIIGGIV
                     HATAYYTFSVPLETASMMGMVVTLLIRLAAIRWHLKLPTFALDENGR"
     gene            complement(20353..21147)
                     /gene="btuF"
                     /locus_tag="JN001_000314"
     CDS             complement(20353..21147)
                     /gene="btuF"
                     /locus_tag="JN001_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005024031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter substrate-binding
                     protein BtuF"
                     /protein_id="HAY9051657.1"
                     /translation="MAKSLFRALVALSFLAPLWLNAAPRVITLSPANTELAFAAGITP
                     VGVSSYSDYPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASPGI
                     KVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFL
                     QFGINPPFTSGKESIQNQVLEVCGGENIFKDSRVPWPQVSREQVLARSPQAIVITGGP
                     DQIPKIKQYWGEQLKIPVIPLTSDWFDVQAHVLSSLHNSSVMRFHR"
     gene            complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="JN001_000315"
     CDS             complement(21140..21838)
                     /gene="mtnN"
                     /locus_tag="JN001_000315"
                     /EC_number="3.2.2.16"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/S-adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HAY9051658.1"
                     /translation="MKIGIIGAMEEEVTLLRDKIENRQTISLGGCEIYTGQLNGTEVA
                     LLKSGIGKVAAALGATLLLEHGKPDVIINTGSAGGLAPTLKVGDIVVSDEARYHDADV
                     TAFGYEYGQLPGCPAGFKADDKLIAAAEACIAELNLNAVRGLIVSGDAFINGSVGLAK
                     IRHNFPQAIAVEMEATAIAHVCHNFNVPFVVVRAISDVADQQSHLSFDEFLAVAAKQS
                     SLMVESLVQKLAHG"
     gene            21922..23439
                     /gene="dgt"
                     /locus_tag="JN001_000316"
     CDS             21922..23439
                     /gene="dgt"
                     /locus_tag="JN001_000316"
                     /EC_number="3.1.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dGTPase"
                     /protein_id="HAY9051659.1"
                     /translation="MAQIDFRKKINWHRRYRSPQGVKTEHEILRIFESDRGRIINSPA
                     IRRLQQKTQVFPLERNAAVRTRLTHSMEVQQVGRYIAKEILSRMKELKLLEAYGLDEL
                     TGPFESIVEMSCLMHDIGNPPFGHFGEAAINDWFRQRLHPEDAESQPLTDDRCSVAAL
                     RLRDGEEPLNELRRKIRQDLCHFEGNAQGIRLVHTLMRMNLTWAQVGGILKYTRPAWW
                     RGETPETHHYLMKKPGYYLSEEAYIARLRKELNLALYSRFPLTWIMEAADDISYCVAD
                     LEDAVEKRIFTVEQLYHHLHEAWGQHEKGSLFSLVVENAWEKSRSNSLSRSTEDQFFM
                     YLRVNTLNKLVPYAAQRFIDNLPAIFAGTFNHALLEDASECSDLLKLYKNVAVKHVFS
                     HPDVEQLELQGYRVISGLLEIYRPLLSLSLSDFTELVEKERVKRFPIESRLFHKLSTR
                     HRLAYVEAVSKLPSDSPEFPLWEYYYRCRLLQDYISGMTDLYAWDEYRRLMAVEQ"
     gene            23569..24993
                     /gene="degP"
                     /locus_tag="JN001_000317"
     CDS             23569..24993
                     /gene="degP"
                     /locus_tag="JN001_000317"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegP"
                     /protein_id="HAY9051660.1"
                     /translation="MKKTTLALSALALSLGLALSPLSATAAETSSATTAQQMPSLAPM
                     LEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGN
                     GGGQQQKFMALGSGVIIDADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRS
                     DIALIQIQNPKNLTAIKMADSDALRVGDYTVAIGNPFGLGETVTSGIVSALGRSGLNA
                     ENYENFIQTDAAINRGNSGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKNL
                     TSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGD
                     VITSLNGKPISSFAALRAQVGTMPVGSKLTLGLLRDGKQVNVNLELQQSSQNQVDSSS
                     IFNGIEGAEMSNKGKDQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKV
                     LDSKPSVLALNIQRGDSTIYLLMQ"
     gene            25148..26305
                     /locus_tag="JN001_000318"
     CDS             25148..26305
                     /locus_tag="JN001_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CdaR family transcriptional regulator"
                     /protein_id="HAY9051661.1"
                     /translation="MAGWHLDTKMAQDIVARTMRIIDTNINVMDARGRIIGSGDRERI
                     GELHEGALLVLSQGRVVDIDDAVARHLHGVRQGINLPLRLEGEIVGVIGLTGEPENLR
                     KYGELVCMTAEMMLEQSRLMHLLAQDSRLREELVMNLIQAEENTPALTEWAQRLGIDL
                     NQPRVVAIVEVDSGQLGVDSAMAELQQLQNALTTPERNNLVAIVSLTEMVVLKPALNS
                     FGRWDAEDHRKRVEQLITRMKEYGRLRFRVSLGNYFTGPGSIARSYRTAKTTMVVGKQ
                     RMPESRCYFYQDLMLPVLLDSLRGDWQANELARPLARLKAMDNNGLLRRTLAAWFRHN
                     VQPLATSKALFIYRNTLEYRLNRISELTGLDLGNFDDRLLLYVALQLDEER"
     gene            complement(26394..26780)
                     /locus_tag="JN001_000319"
     CDS             complement(26394..26780)
                     /locus_tag="JN001_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000272186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3461 family protein"
                     /protein_id="HAY9051662.1"
                     /translation="MYDNLKSLGITNPEEIDRYSLRQEANNDILKIYFQKDKGEFFAK
                     SVKFKYPRQRKTVVADGVGQGYKEVQEISPNLRYIIDELDQICQRDRSEVDLKRKILD
                     DLRHLESVVTNKISEIEADLEKLTRK"
     gene            complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="JN001_000320"
     CDS             complement(26942..27754)
                     /gene="yaeI"
                     /locus_tag="JN001_000320"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414706.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase YaeI"
                     /protein_id="HAY9051663.1"
                     /translation="MISRRRLLQATAATIATSSGFGYMHYWEPGWFELIRHRLAFFKD
                     NAAPFKILFLADLHYSRFVPLSLISDAIALGIEQKPDLILLGGDYVLFDMPLNFSAFS
                     DVLSPLAECAPTFACFGNHDRPVGTEKNHLIGETLKSVGITVLFNQATVIATPNRQFE
                     LVGTGDLWAGQCKPPPASEANLPRLMLAHNPDSKEVMRDEPWDLMLCGHTHGGQLRVP
                     LVGEPFAPVEDKRYVAGLNAFGERHIYTTRGVGSLYGLRLNCRPEVTMLELV"
     gene            complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="JN001_000321"
     CDS             complement(27809..28633)
                     /gene="dapD"
                     /locus_tag="JN001_000321"
                     /EC_number="2.3.1.117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-succinyltransferase"
                     /protein_id="HAY9051664.1"
                     /translation="MQQLQNIIETAFERRAEITPTNADTVTREAVNQVIALLDSGALR
                     VAEKIDGQWVTHQWLKKAVLLSFRINDNQVIEGAESRYFDKVPMKFADYDEARFQKEG
                     FRVVPPAAVRQGAFIARNTVLMPSYVNIGAYVDEGTMVDTWATVGSCAQIGKNVHLSG
                     GVGIGGVLEPLQANPTIIEDNCFIGARSEVVEGVIVEEGSVISMGVYIGQSTRIYDRE
                     TGEIHYGHVPAGSVVVSGNLPSKDGKYSLYCAVIVKKVDAKTRGKVGINELLRTID"
     gene            complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="JN001_000322"
     CDS             complement(28664..31336)
                     /gene="glnD"
                     /locus_tag="JN001_000322"
                     /EC_number="2.7.7.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     uridylyltransferase/uridylyl-removing protein GlnD"
                     /protein_id="HAY9051665.1"
                     /translation="MNTLPEQYANTALPTLPGQPQNPCVWPRDELTVGGIKAHIDTFQ
                     RWLGDAFDNGISAEQLIEARTEFIDQLLQRLWIEAGFSQIADLALVAVGGYGRGELHP
                     LSDIDLLILSRKKLPDDQAQKVGELLTLLWDVKLEVGHSVRTLEECMLEGLSDLTVAT
                     NLIESRLLIGDVALFLELQKHIFSEGFWPSDKFYAAKVEEQNQRHQRYHGTSYNLEPD
                     IKSSPGGLRDIHTLQWVARRHFGATSLDEMVGFGFLTSAERAELNECLHILWRIRFAL
                     HLVVSRYDNRLLFDRQLSVAQRLNYSGEGNEPVERMMKDYFRVTRRVSELNQMLLQLF
                     DEAILALPADEKPRPIDDEFQLRGTLIDLRDETLFMRQPEAILRMFYTMVRNSAITGI
                     YSTTLRQLRHARRHLQQPLCNIPEARKLFLSILRHPGAVRRGLLPMHRHSVLGAYMPQ
                     WSHIVGQMQFDLFHAYTVDEHTIRVMLKLESFASEETRQRHPLCVDVWPRLPSTELIF
                     IAALFHDIAKGRGGDHSILGAQDVVHFAELHGLNSRETQLVAWLVRQHLLMSVTAQRR
                     DIQDPEVIKQFAEEVQTENRLRYLVCLTVADICATNETLWNSWKQSLLRELYFATEKQ
                     LRRGMQNTPDMRERVRHHQLQALALLRMDNIDEEALHQIWSRCRANYFVRHSPNQLAW
                     HARHLLQHDLSKPLVLLSPQATRGGTEIFIWSPDRPYLFAAVCAELDRRNLSVHDAQI
                     FTTRDGMAMDTFIVLEPDGSPLSADRHEVIRFGLEQVLTQSSWQPPQPRRQPAKLRHF
                     TVETEVTFLPTHTDRKSFLELIALDQPGLLARVGKIFADLGISLHGARITTIGERVED
                     LFIIATADRRALNNELQQEVHQRLTEALNPNDKG"
     gene            complement(31398..32192)
                     /gene="map"
                     /locus_tag="JN001_000323"
     CDS             complement(31398..32192)
                     /gene="map"
                     /locus_tag="JN001_000323"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HAY9051666.1"
                     /translation="MAISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRI
                     CNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIK
                     DGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAE
                     GFSVVREYCGHGIGRGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMK
                     DGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDDTIPAIISHDE"
     gene            32560..33285
                     /gene="rpsB"
                     /locus_tag="JN001_000324"
     CDS             32560..33285
                     /gene="rpsB"
                     /locus_tag="JN001_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HAY9051667.1"
                     /translation="MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLE
                     KTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLT
                     NWKTVRQSIKRLKDLETQSQDGTFEKLTKKEALMRTRELEKLENSLGGIKDMGGLPDA
                     LFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVA
                     ATVREGRSQDLASQAEESFVEAE"
     gene            33543..34394
                     /gene="tsf"
                     /locus_tag="JN001_000325"
     CDS             33543..34394
                     /gene="tsf"
                     /locus_tag="JN001_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HAY9051668.1"
                     /translation="MAEITASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKS
                     GAIKAAKKAGNVAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVA
                     GKITDVEVLKAQFEEERVALVAKIGENINIRRVAALEGDVLGSYQHGARIGVLVAAKG
                     ADEELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGKPKEIAEKMVEG
                     RMKKFTGEVSLTGQPFVMEPSKTVGQLLKEHNAEVTGFIRFEVGEGIEKVETDFAAEV
                     AAMSKQS"
     gene            34541..35266
                     /gene="pyrH"
                     /locus_tag="JN001_000326"
     CDS             34541..35266
                     /gene="pyrH"
                     /locus_tag="JN001_000326"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HAY9051669.1"
                     /translation="MATNAKPVYKRILLKLSGEALQGTEGFGIDASILDRMAQEIKEL
                     VELGIQVGVVIGGGNLFRGAGLAKAGMNRVVGDHMGMLATVMNGLAMRDALHRAYVNA
                     RLMSAIPLNGVCDSYSWAEAISLLRNNRVVILSAGTGNPFFTTDSAACLRGIEIEADV
                     VLKATKVDGVFTADPAKDPTATMYEQLTYSEVLEKELKVMDLAAFTLARDHKLPIRVF
                     NMNKPGALRRVVMGEKEGTLITE"
     gene            35558..36115
                     /gene="frr"
                     /locus_tag="JN001_000327"
     CDS             35558..36115
                     /gene="frr"
                     /locus_tag="JN001_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000622421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HAY9051670.1"
                     /translation="MISDIRKDAEVRMDKCVEAFKTQISKIRTGRASPSLLDGIVVEY
                     YGTPTPLRQLASVTVEDSRTLKINVFDRSMSPAVEKAIMASDLGLNPNSAGSDIRVPL
                     PPLTEERRKDLTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDDDRRSQDDV
                     QKLTDAAIKKIEAALADKEAELMQF"
     gene            36207..37403
                     /gene="ispC"
                     /locus_tag="JN001_000328"
     CDS             36207..37403
                     /gene="ispC"
                     /locus_tag="JN001_000328"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HAY9051671.1"
                     /translation="MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE
                     QCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQQAACDMAALEDVDQVMAAIV
                     GAAGLLPTLAAIRAGKTILLANKESLVTCGRLFMDAVKQSKAQLLPVDSEHNAIFQSL
                     PQPIQHNLGYADLEQNGVVSILLTGSGGPFRETPLRDLATMTPDQACRHPNWSMGRKI
                     SVDSATMMNKGLEYIEARWLFNASASQMEVLIHPQSVIHSMVRYQDGSVLAQLGEPDM
                     RTPIAHTMAWPNRVNSGVKPLDFCKLSALTFAAPDYDRYPCLKLAMEAFEQGQAATTA
                     LNAANEITVAAFLAQQIRFTDIAALNLSVLEKMDMREPQCVDDVLSVDANAREVARKE
                     VMRLAS"
     gene            37591..38349
                     /gene="ispU"
                     /locus_tag="JN001_000329"
                     /gene_synonym="uppS"
     CDS             37591..38349
                     /gene="ispU"
                     /locus_tag="JN001_000329"
                     /gene_synonym="uppS"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308203.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2E,6E)-farnesyl-diphosphate-specific
                     ditrans,polycis-undecaprenyl-diphosphate synthase"
                     /protein_id="HAY9051672.1"
                     /translation="MLSATQPLSEKLPAHGCRHVAIIMDGNGRWAKKQGKIRAFGHKA
                     GAKSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH
                     NVRLRIIGDTSRFNSRLQECIRKSEALTAGNTGLTLNIAANYGGRWDIVQGVRQLAEK
                     VQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGEHRISNFLLWQIAYAELYFIDV
                     LWPDFDEQDFEGALNAFANRERRFGGTEPGDETA"
     gene            38362..39219
                     /gene="cdsA"
                     /locus_tag="JN001_000330"
     CDS             38362..39219
                     /gene="cdsA"
                     /locus_tag="JN001_000330"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414717.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HAY9051673.1"
                     /translation="MLKYRLISAFVLIPVVIAALFLLPPVGFAIVTLVVCMLAAWEWG
                     QLSGFTTRSQRVWLAVLCGLLLALMLFLLPEYHRNIHQPLVEISLWASLGWWIVSLLL
                     VLFYPGSAAIWRNSKTLRLIFGVLTIVPFFWGMLALRAWHYDENHYSGAIWLLYVMIL
                     VWGADSGAYMFGKLFGKHKLAPKVSPGKTWQGFIGGLATAAVISWGYGMWANLDVAPV
                     TLLICSIVAALASVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDSLTAAVPVFAC
                     LLLLVFRTL"
     gene            39231..40583
                     /gene="rseP"
                     /locus_tag="JN001_000331"
     CDS             39231..40583
                     /gene="rseP"
                     /locus_tag="JN001_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma E protease regulator RseP"
                     /protein_id="HAY9051674.1"
                     /translation="MLSFLWDLASFIVALGVLITVHEFGHFWVARRCGVRVERFSIGF
                     GKALWRRTDKLGTEYVIALIPLGGYVKMLDERAEPVVPELRHHAFNNKSVGQRAAIIA
                     AGPVANFIFAIFAYWLVFIIGVPGVRPVVGEIAANSIAAEAQIAPGTELKAVDGIETP
                     DWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWAFEPDKEDPVSSLGIRPR
                     GLQIEPVLENVQPNSAASKAGLQAGDRIVKVDGQPLTQWVTFVMLVRDNPGKSLALEI
                     ERQGSLLSLTLIPESKPGNGKAIGFVGIEPKVIPLPDEYKVVRQYGPFNAIVEATDKT
                     WQLMKLTVSMLGKLITGDVKLNNLSGPISIAKGAGMTAELGVVYYLPFLALISVNLGI
                     INLFPLPVLDGAHLLFLAIEKIKGGPVSERVQDFCYRIGSILLVLLMGLALFNDFSRL
                     "
     gene            40613..43045
                     /gene="bamA"
                     /locus_tag="JN001_000332"
     CDS             40613..43045
                     /gene="bamA"
                     /locus_tag="JN001_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamA"
                     /protein_id="HAY9051675.1"
                     /translation="MAMKKLLIASLLFSSATVYGAEGFVVKDIHFEGLQRVAVGAALL
                     SMPVRTGDTVNDEDISNTIRALFATGNFEDVRVLRDGDTLLVQVKERPTIASITFSGN
                     KSVKDDMLKQNLEASGVRVGESLDRTTIADIEKGLEDFYYSVGKYSASVKAVVTPLPR
                     NRVDLKLVFQEGVSAEIQQINIVGNHAFTTDELISHFQLRDEVPWWNVVGDRKYQKQK
                     LAGDLETLRSYYLDRGYARFNIDSTQVSLTPDKKGIYVTVNITEGDQYKLSGVEVSGN
                     LAGHSAEIEQLTKIEPGELYNGTKVTKMEDDIKKLLGRYGYAYPRVQSMPEINDADKT
                     VKLRVNVDAGNRFYVRKIRFEGNDTSKDAVLRREMRQMEGAWLGSDLVDQGKERLNRL
                     GFFETVDTDTQRVPGSPDQVDVVYKVKERNTGSFNFGIGYGTESGVSFQAGVQQDNWL
                     GTGYAVGINGTKNDYQTYAELSVTNPYFTVDGVSLGGRLFYNDFQADDADLSDYTNKS
                     YGTDVTLGFPINEYNSLRAGLGYVHNSLSNMQPQVAMWRYLYSMGEHPSTSDQDNSFK
                     TDDFTFNYGWTYNKLDRGYFPTDGSRVNLTGKVTIPGSDNEYYKVTLDTATYVPIDDD
                     HKWVVLGRTRWGYGDGLGGKEMPFYENFYAGGSSTVRGFQSNTIGPKAVYFPHQASNY
                     DPDYDYECATQDGAKDLCKSDDAVGGNAMAVASLEFITPTPFISDKYANSVRTSFFWD
                     MGTVWDTNWDSSQYSGYPDYSDPSNIRMSAGIALQWMSPLGPLVFSYAQPFKKYDGDK
                     AEQFQFNIGKTW"
     gene            43167..43652
                     /gene="skp"
                     /locus_tag="JN001_000333"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
     CDS             43167..43652
                     /gene="skp"
                     /locus_tag="JN001_000333"
                     /gene_synonym="hlpA"
                     /gene_synonym="ompH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone Skp"
                     /protein_id="HAY9051676.1"
                     /translation="MKKWLLAAGLGLALATSAQAADKIAIVNMGSLFQQVAQKTGVSN
                     TLENEFKGRASELQRMETDLQAKMKKLQSMKAGSDRTKLEKDVMAQRQTFAQKAQAFE
                     QDRARRSNEERGKLVTRIQTAVKSVANSQDIDLVVDANAVAYNSSDVKDITADVLKQV
                     K"
     gene            43656..44681
                     /gene="lpxD"
                     /locus_tag="JN001_000334"
     CDS             43656..44681
                     /gene="lpxD"
                     /locus_tag="JN001_000334"
                     /EC_number="2.3.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-(3-hydroxymyristoyl)glucosamine
                     N-acyltransferase"
                     /protein_id="HAY9051677.1"
                     /translation="MPSIRLADLAQQLDAELHGDGDIVITGVASMQSAQTGHITFMVN
                     PKYREHLGLCQASAVVMTQDDLPFAKSAALVVKNPYLTYARMAQILDTTPQPAQNIAP
                     SAVIDATAKLGNNVSIGANAVIESGVELGDNVIIGAGCFVGKNSKIGAGSRLWANVTI
                     YHEIQIGQNCLIQSGTVVGADGFGYANDRGNWVKIPQIGRVIIGDRVEIGACTTIDRG
                     ALDDTVIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGH
                     MEICDKVTVTGMGMVMRPITEPGVYSSGIPLQPNKVWRKTAALVMNIDDMSKRLKSLE
                     RKVNQQD"
     gene            44786..45241
                     /gene="fabZ"
                     /locus_tag="JN001_000335"
     CDS             44786..45241
                     /gene="fabZ"
                     /locus_tag="JN001_000335"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000210741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HAY9051678.1"
                     /translation="MTTNTHTLQIEEILELLPHRFPFLLVDRVLDFEEGRFLRAVKNV
                     SVNEPFFQGHFPGKPIFPGVLILEAMAQATGILAFKSVGKLEPGELYYFAGIDEARFK
                     RPVVPGDQMIMEVTFEKTRRGLTRFKGVALVDGKVVCEATMMCARSREA"
     gene            45245..46033
                     /gene="lpxA"
                     /locus_tag="JN001_000336"
     CDS             45245..46033
                     /gene="lpxA"
                     /locus_tag="JN001_000336"
                     /EC_number="2.3.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-ACP--UDP-N-acetylglucosamine
                     O-acyltransferase"
                     /protein_id="HAY9051679.1"
                     /translation="MIDKSAFVHPTAIVEEGASIGANAHIGPFCIVGPHVGIGEGTVL
                     KSHVVVNGHTKIGRDNEIYQFASIGEVNQDLKYAGEPTRVEIGDRNRIRESVTIHRGT
                     VQGGGLTKVGSDNLLMINAHIAHDCTVGNRCILANNATLAGHVSVDDFAIIGGMTAVH
                     QFCIIGAHVMVGGCSGVAQDVPPYVIAQGNHATPFGVNIEGLKRRGFSREAITAIRNA
                     YKLIYRSGKTLDEVKPEIAELAETYPEVKAFTDFFSRSTRGLIR"
     gene            46033..47181
                     /gene="lpxB"
                     /locus_tag="JN001_000337"
     CDS             46033..47181
                     /gene="lpxB"
                     /locus_tag="JN001_000337"
                     /EC_number="2.4.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase"
                     /protein_id="HAY9051680.1"
                     /translation="MTEQRPLTIALVAGETSGDILGAGLIRALKERVPNARFVGVAGP
                     RMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDF
                     NITLEGNLKKQGIKTIHYVSPSVWAWRQKRVFKIGRATDLVLAFLPFEKAFYDKYNVP
                     CRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQL
                     LRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDFSVHLLDGMGREAMVASDAALLASG
                     TAALECMLVKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEP
                     QKLAAALLPLLANGKISHAMHDTFRELHQQIRCNADEQAAQAVLELAQ"
     gene            47178..47774
                     /gene="rnhB"
                     /locus_tag="JN001_000338"
     CDS             47178..47774
                     /gene="rnhB"
                     /locus_tag="JN001_000338"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HAY9051681.1"
                     /translation="MIEFVYPHTQLVAGVDEVGRGPLVGAVVTAAVILDPARPIAGLN
                     DSKKLSEKRRLALCEEIKEKALSWSLGRAEPHEIDELNILHATMLAMQRAVAGLHIAP
                     EYVLIDGNRCPKLPMPAMVVVKGDSRVPEISAASILAKVTRDAEMAALDIVFPQYGFA
                     QHKGYPTAFHLEKLAEHGATEHHRRSFGPVKRALGLAS"
     gene            47811..51293
                     /gene="dnaE"
                     /locus_tag="JN001_000339"
     CDS             47811..51293
                     /gene="dnaE"
                     /locus_tag="JN001_000339"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HAY9051682.1"
                     /translation="MSEPRFVHLRVHSDYSMIDGLAKTAPLVKKAAALGMPALAITDF
                     TNLCGLVKFYGAGHGAGIKPIVGADFNVQCDLLGDELTHLTVLAANNTGYQNLTLLIS
                     KAYQRGYGAAGPIIDRDWLIELNEGLILLSGGRMGDVGRSLLRGNSALVDECVAFYEE
                     HFPDRYFLELIRTGRPDEESYLHAAVELAEARGLPVVATNDVRFIDSSDFDAHEIRVA
                     IHDGFTLDDPKRPRNYSPQQYMRSEEEMCELFADIPEALANTVEIAKRCNVTVRLGEY
                     FLPQFPTGDMSTEDYLVKRAKEGLEERLAFLFPDEEERVKRRPEYDERLETELQVINQ
                     MGFPGYFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFL
                     NPERVSMPDFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
                     HPYGFVDRISKLIPPDPGMTLAKAFEAEPQLPEIYEADEEVKALIDMARKLEGVTRNA
                     GKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAGLVKFDFLGLRTLTIIN
                     WALEMINKRRAKNGEPPLDIAAIPLDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLQ
                     PDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREEISYPDVQWQHESLKPVLEPTYG
                     IILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEMAKQRSVFAEGAEKNGVNAEL
                     AMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVV
                     GLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKGVGEGPIEAIIEARNKG
                     GYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMNSLGDALKAADQHAK
                     AEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLYLTGHPINQYLKE
                     IERYVGGVRLKDMHPTERGKVITAAGLVVAARVMVTKRGNRIGICTLDDRSGRLEVML
                     FTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKYASGLAISL
                     TDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDL
                     RGLIGSEQVELEFD"
     gene            51306..52265
                     /gene="accA"
                     /locus_tag="JN001_000340"
     CDS             51306..52265
                     /gene="accA"
                     /locus_tag="JN001_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyl transferase
                     subunit alpha"
                     /protein_id="HAY9051683.1"
                     /translation="MSLNFLDFEQPIAELEAKIDSLTAVSRQDEKLDINIDEEVHRLR
                     EKSVELTRKIFADLGAWQIAQLARHPQRPYTLDYVRLAFDEFDELAGDRAYADDKAIV
                     GGIARLDGRPVMIIGHQKGRETKEKIRRNFGMPAPEGYRKALRLMQMAERFKMPIITF
                     IDTPGAYPGVGAEERGQSEAIARNLREMSRLGVPVVCTVIGEGGSGGALAIGVGDKVN
                     MLQYSSYSVISPEGCASILWKSADKAPLAAEAMGIIAPRLKELKLIDSIIPEPLGGAH
                     RNPEAMAASLKAQLLADLADLDVLSTEDLKNRRYQRLMSYGYA"
     gene            52364..54473
                     /gene="ldcC"
                     /locus_tag="JN001_000341"
                     /pseudo
     CDS             52364..54473
                     /gene="ldcC"
                     /locus_tag="JN001_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414728.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lysine decarboxylase LdcC"
     gene            54530..54919
                     /locus_tag="JN001_000342"
     CDS             54530..54919
                     /locus_tag="JN001_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308216.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY9051684.1"
                     /translation="MLGLKQVHHIAIIATDYAVSKAFYCDILGFTLQSEVYREARDSW
                     KGDLALNGQYVIELFSFPFPPERPSRPEACGLRHLAFSVDDIDAAVAHLESHNVKCEA
                     IRVDPYTQKRFTFFNDPDGLPLELYEQ"
     gene            54984..56282
                     /gene="tilS"
                     /locus_tag="JN001_000343"
     CDS             54984..56282
                     /gene="tilS"
                     /locus_tag="JN001_000343"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HAY9051685.1"
                     /translation="MTLTLNRQLLTSRQILVAFSGGLDSTVLLHQLVQWRTENPGVTL
                     RAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQLAQEGLGIEAQARQARYQAFA
                     RTLLPGEVLVTAQHLDDQCETFLLALKRGSGPAGLSAMAEVSEFAGTRLIRPLLARTR
                     GELAQWALAHGLRWIEDESNQDDSYDRNFLRLRVVPLLQQRWPHFAEATARSAALCAE
                     QESLLDELLADDLAHCQTSQGTLQIAPMLAMSDARRAAIIRRWLAGQNAPMPSREALV
                     RIWQEVALAREDASPCLRLGAFEIRRYQSQLWWIKSVTGQSETIVPWQTWLQPLELPA
                     GLGSVQLTAGGDIRPPRADEAVSVRFKSAGLLHIVGRNGGRKLKKIWQELGVPPWLRD
                     TTPLLFYGETLIAAAGVFVTQEGVAEGENGVSFVWQKTLS"
     gene            complement(56331..56591)
                     /gene="rof"
                     /locus_tag="JN001_000344"
     CDS             complement(56331..56591)
                     /gene="rof"
                     /locus_tag="JN001_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rho-binding antiterminator"
                     /protein_id="HAY9051686.1"
                     /translation="MLMNDTYQPINCDDYDNLELACQHHLMLTLELKDGEKLQAKASD
                     LVSRKNVEYLVVEAAGETRELRLDKITSFSHPEIGTVVVSES"
     gene            complement(56578..56778)
                     /locus_tag="JN001_000345"
     CDS             complement(56578..56778)
                     /locus_tag="JN001_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeP family protein"
                     /protein_id="HAY9051687.1"
                     /translation="MEKYCELIRKRYAEIASGDLGYVPDALGCVLKVLNEMAADDALS
                     EAVREKAAYAAANLLVSDYVNE"
     gene            56944..57489
                     /locus_tag="JN001_000346"
     CDS             56944..57489
                     /locus_tag="JN001_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaeQ family protein"
                     /protein_id="HAY9051688.1"
                     /translation="MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRL
                     LAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEV
                     ALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGV
                     IWLSDDKNNLEVNLTAWQQPS"
     gene            57486..57908
                     /gene="arfB"
                     /locus_tag="JN001_000347"
     CDS             57486..57908
                     /gene="arfB"
                     /locus_tag="JN001_000347"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY9051689.1"
                     /translation="MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIR
                     ASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQ
                     KARRPTRPTRASKERRLASKAQKSSAKAMRGKVRSGRE"
     gene            57922..58632
                     /gene="nlpE"
                     /locus_tag="JN001_000348"
                     /gene_synonym="cutF"
     CDS             57922..58632
                     /gene="nlpE"
                     /locus_tag="JN001_000348"
                     /gene_synonym="cutF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308221.1"
                     /note="NlpE, an outer membrane lipoprotein, interacts
                     directly with CpxA, the sensor histidine kinase of the Cpx
                     system for response to envelope stress; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response activation lipoprotein
                     NlpE"
                     /protein_id="HAY9051690.1"
                     /translation="MVKKAIVTAMAVISLFTLMGCNNRAEVDTLSPAQAAELKPMPQS
                     WRGVLPCADCEGIETSLFLEKDGTWVMNERYLGAREEPSSFASYGTWARTADKLVLTD
                     SKGEKSYYRAKGDALEMLDREGNPIESQFNYTLEPAQSSLPMTPMTLRGMYFYMADAA
                     TFTDCATGKRFMVANNAELERGYLAARGHSEKPVLLSVEGHFTLEANPDTGAPTKVLA
                     PDTAGKFYPNKDCSSLGQ"
     gene            complement(58832..59652)
                     /locus_tag="JN001_000349"
                     /pseudo
     CDS             complement(58832..59652)
                     /locus_tag="JN001_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414735.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YaeF family permuted papain-like enzyme"
     gene            complement(59705..61423)
                     /gene="proS"
                     /locus_tag="JN001_000350"
     CDS             complement(59705..61423)
                     /gene="proS"
                     /locus_tag="JN001_000350"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HAY9051691.1"
                     /translation="MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLP
                     TGVRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGER
                     PFVLGPTHEEVITDLIRNELSSYKQLPLNFYQIQTKFRDEVRPRFGVMRSREFLMKDA
                     YSFHTSQESLQETYDAMYAAYSKIFSRMGLDFRAVQADTGSIGGSASHEFQVLAQSGE
                     DDVVFSDTSDYAANIELAEAIAPKEPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEK
                     TVKTLLVKAVEGSSFPLVALLVRGDHELNEVKAEKLPQVASPLTFATEEEIRAVVKAG
                     PGSLGPVNMPIPVVIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPEVADIRNVVA
                     GDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTR
                     VVAAAIEQNYDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVL
                     LDDRKERPGVMFADMELIGIPHTIVLGDRNLDNDDIEYKYRRNGEKQLIKTGDIVEYL
                     VKQIKG"
     gene            complement(61533..62240)
                     /gene="tsaA"
                     /locus_tag="JN001_000351"
     CDS             complement(61533..62240)
                     /gene="tsaA"
                     /locus_tag="JN001_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HAY9051692.1"
                     /translation="MSSFQFEQIGVIRSPYKEKFAVPRQPGLVKSANGELHLIAPYNQ
                     ADAVRGLEAFSHLWILFVFHQTMEGGWRPTVRPPRLGGNARMGVFATRSTFRPNPIGM
                     SLVELKEVVCHKDSVILKLGSLDLVDGTPVVDIKPYLPFAESLPDASASYAQSAPAAE
                     MAVSFTAEVEKQLLTLEKRYPQLTLFIREVLAQDPRPAYHKGEETGKTYAVWLHDFNV
                     RWRVTDAGFEVFALEPR"
     gene            complement(62237..62641)
                     /gene="rcsF"
                     /locus_tag="JN001_000352"
     CDS             complement(62237..62641)
                     /gene="rcsF"
                     /locus_tag="JN001_000352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rcs stress response system protein RcsF"
                     /protein_id="HAY9051693.1"
                     /translation="MRALPICLVALMLSGCSMLSRSPVEPVQSTAPQPKAEPAKPKAP
                     RATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKAN
                     AVLLHSCEVTSGTPGCYRQAVCIGSALNITAK"
     gene            complement(62759..63574)
                     /gene="metQ"
                     /locus_tag="JN001_000353"
     CDS             complement(62759..63574)
                     /gene="metQ"
                     /locus_tag="JN001_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter substrate-binding
                     lipoprotein MetQ"
                     /protein_id="HAY9051694.1"
                     /translation="MAFKFKTFAAVGALIGSLALVGCGQDEKDPNHIKVGVIVGAEQQ
                     VAEVAQKVAKDKYGLDVELVTFNDYVLPNEALSKGDIDANAFQHKPYLDQQLKDRGYK
                     LVAVGNTFVYPIAGYSKKIKSLDELQDGSQVAVPNDPTNLGRSLLLLQKVGLIKLKDG
                     VGLLPTVLDVVENPKNLKIVELEAPQLPRSLDDAQIALAVINTTYASQIGLTPAKDGI
                     FVEDKDSPYVNLIVTREDNKDAENVKKFVQAYQSDEVYEAANKVFNGGAVKGW"
     gene            complement(63614..64267)
                     /gene="metI"
                     /locus_tag="JN001_000354"
     CDS             complement(63614..64267)
                     /gene="metI"
                     /locus_tag="JN001_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter permease MetI"
                     /protein_id="HAY9051695.1"
                     /translation="MSEPMMWLLVRGVWETLAMTFVSGFFGFVIGLPVGVLLYVTRPG
                     QIIANAKLYRTVSAIVNIFRSIPFIILLVWMIPFTRVIVGTSIGLQAAIVPLTVGAAP
                     FIARMVENALLEIPTGLIEASRAMGATPMQIVRKVLLPEALPGLVNAATITLITLVGY
                     SAMGGAVGAGGLGQIGYQYGYIGYNATVMNTVLVLLVILVYLIQFAGDRIVRAVTRK"
     gene            complement(64260..65291)
                     /gene="metN"
                     /locus_tag="JN001_000355"
     CDS             complement(64260..65291)
                     /gene="metN"
                     /locus_tag="JN001_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014168731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein
                     MetN"
                     /protein_id="HAY9051696.1"
                     /translation="MIKLSNITKVFHQGTRIIQALNNVSLHVPAGQIYGVIGASGAGK
                     STLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGN
                     VALPLELDNTPKDEIKRRVTELLSLVGLGDKHDSYPSNLSGGQKQRVAIARALASNPK
                     VLLCDEATSALDPATTRSILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGE
                     LIEQDTVSEVFSHPKTPLAQKFIQSTLHLDIPEDYQERLQAEPFTDCVPMLRLEFTGQ
                     SVDAPLLSETARRFNVNNNIISAQMDYAGGVKFGIMLTEMHGTQQDTQAAIAWLQEHH
                     VKVEVLGYV"
     gene            65479..66051
                     /gene="gmhB"
                     /locus_tag="JN001_000356"
     CDS             65479..66051
                     /gene="gmhB"
                     /locus_tag="JN001_000356"
                     /EC_number="3.1.3.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1,7-bisphosphate
                     7-phosphatase"
                     /protein_id="HAY9051697.1"
                     /translation="MAKSVPAIFLDRDGTINVDHGYVHEIDNFEFIDGVIDAMRELKK
                     MGFVLVVVTNQSGIARGKFTEAQFETLTEWMDWSLADRDVDLDGIYYCPHHPQGSVEE
                     FRQVCDCRKPHPGMLLSARDYLHIDMAASYMVGDKLEDMQAAAAANVGTKVLVRTGKP
                     ITPEAENAADWVLNSLADLPQAIKKQQKPA"
BASE COUNT        15764 a        16432 c        18201 g        15950 t
ORIGIN      
        1 tgggattgat atttatctgc gggaatttat attatgtttc tgcaaaaatg tttaaactaa
       61 aatttttatt aaggaaagag aggatgtatg attttcagaa aatatttata ttcgtaatat
      121 aaataaatta ccatttgctt aattcgtcaa atgctcttgt atgtaagact tcacgcaacg
      181 tctccccatc aggaaacgcc agctccggtg caatctcaaa cagcggccac agcataaatc
      241 cacgattctt catatcgtag tgcggaacgg tcaggcgttc ggtatttatc acttcattac
      301 caaacagcat gatatcgaga tccagcgtgc gtggtcccca gcgttcagct ttacgaacac
      361 gatcctgttg cagttctatg cgctgtgtat ggttgagtaa ctcttccggg gcgagcgaag
      421 tttcaagcgc cacggcggcg ttgaggtaat cgggttgatc ttgcggcccc agcggtggag
      481 tgcggtaaaa cgaagaaacg gcaagaatgt ggctttcagg gatatcgcct aatgctttca
      541 gggcagcatt gacctgctcc agcggagagg ccagattgct gcctatggca atatacgcca
      601 ctgtcatgcg gtaccctcac gacgcggtgc gcgtttgcgt ggacgacgag tacggcgacg
      661 cggtgacggc tcttcatcca actcgttaag catccctttt tgatctggtg gcgcggaaac
      721 ctggaactca ccccaccatt tcaccagacg ctgcagttca gcgttacgtt caacttcagc
      781 tcgcaaggcc aacaggtcat aagccgcacg gaacttagga tgctccagca gtttccatgc
      841 gcgtttaccc tgacgacggg acatacgcaa ctgcaactgc cagatatcgc gggttaacgt
      901 cgtcagacgt ttcgggattg ccagtgaacg gcaggcttcg tccagcacgt cgttcatcgc
      961 cagcgcgaaa gcgtcgtgat aggtcaggcc gctttcctgg gcgatcttct gtgccgtctc
     1021 cagcagtggg taccagaaca tggcggcaaa caagaacgcc gggttcacgc gcatatcgtt
     1081 atggatacgc gtatcggtat tcttcagcac ctgttcaatg atccgctcca tcgggctgtc
     1141 gccattttcc gtgaagtagc gggtaatggt cgggaacagc ggctggaaca gatgatattc
     1201 acacaacagc ttataggttt cgtaaccgta gcccgcttgt agcagtttaa gcgattcttc
     1261 aaacaggcgt gccggtggga tatcgttcag cagggtagcg aggcgaggga tcggttctgc
     1321 ggtttccggg ctgatgcgca tacccaattt ggcggcaaaa cgtaccgcgc gcagcatacg
     1381 taccggatct tcacggtagc gcgtttccgg gttaccaatc agacggataa cgccgtcctt
     1441 cagatccttc atgccgccaa cgtaatcacg gacggtaaaa tccgctacgc tgtaatacag
     1501 gctgttgata gtgaaatcgc ggcgctgggc gtcttcttcg atggagccga aaatgttgtc
     1561 gcgcagcaac atgccgtttt gcccgcgttg ggaggtcgtg cggtcgctga cgttaccttc
     1621 gtggtgtcca cggaaggttg caacttcgat aatctccggg ccaaacatca catgagccag
     1681 acggaaacgg cgacccacaa ggcggcagtt acggaacagt ttgcgcacct gctcaggcgt
     1741 ggcgttagtg gttacgtcaa aatctttcgg ctttttgcca agtaacaggt cgcgcacgcc
     1801 gccgccaacc agccaggctt cgtatcccgc tttattgagc ctgtacatta ccttcagggc
     1861 attttcactg atatctttgc gggaaatagc atgctgctca cgcgggatca ccgtcacctg
     1921 tggacgggcg actgcctgtt cagcctcgct ttcctcgcgg cttagcacct tgcggcaaaa
     1981 attagcgact cgggtaaaaa tagtacacct cggtagtgtc aaacatcatt caggacaaaa
     2041 aaatagcggc taatcatagc tcagcatgac gcatttgaga atgttgaatt tacaattgcc
     2101 gactcgggca cggcggtcag cgtccagttt ttgacggctg actgaaggat ttgctcgacg
     2161 ctgaaatcct gccagtgtgc ttctacctgc tgccccagaa attgaagtgc cgcgattagt
     2221 accgggcgtg gatcgccttt cggcaacgca ggcgcatgat tctgcttgga aagtttagcg
     2281 ccttgtggat taagcgccag cggcagatga atgtaatctg gcactttcca gccaaaaagc
     2341 tggtacagcg agatttgcct tactgttggt tcaatcagat cagccccacg cactatttct
     2401 gtaacgccct ggaaatgatc atcaaccaca acagccaggt tgtaggcgaa caacccatca
     2461 cggcgatgaa tgataaaatc ttcccgtgcc agtttttcgt cggcgtgaat aatgccgcgc
     2521 agctggtcag taaattgcgt gaccggatgc tgctggcgga tacgcactgc ggcgttgtct
     2581 ggtccatgat gcaacacccg gcaatgaccg tcgtaaatac cgacaatgct ttgaatacgc
     2641 gcacgcgtac aggtgcagta ataacttagt ccttgttcat gtaaccaggc gagtgcttca
     2701 cgataggcgt cgtgacgttg cgattgccag agaacatcgc cgtcccagtg cagaccgtaa
     2761 tgttccagct ggcgcaggat agtttctgcg gcaccgggaa cttcacgagg cgggtcgata
     2821 tcttctatgc gtaccagcca gcgaccttgc cgggcgcgag cctgcaaata gctgccgagc
     2881 gcggcgatca gagagccaaa atgaagctcg ccggaaggag agggggcgaa gcggccaata
     2941 tactgtgtgt ctgtcatctc tttgaacaaa aaataaggcg ggagcatttc ccgcctgtgg
     3001 taaacgtgat ggaacggctg taattagcca gccatctgtt tttcgcgaat ttcagccagc
     3061 gttttgcagt cgatgcacag atcggctgtc gggcgcgctt ccagacggcg aataccaatt
     3121 tcaacaccgc aggattcgca gtagccgaaa tcttcgtctt ccactttttt cagcgtcttc
     3181 tcgatctttt tgatcagctt acgctcgcga tcgcggttac gcagttcgag gctgaactct
     3241 tcttcctggg ctgcacggtc taccgggtcc gggaagttgg ctgcttcatc ctgcatatgt
     3301 gtaacggtgc gatcgacttc atccctgagt tgattacgcc atgcttccag aatacgacgg
     3361 aagtgcgcca gctgggcttc attcatatac tcttcgcccg gcttctcctg atatggttcc
     3421 accccagcga tggcgagaat actcagggac gatgttttac ggttttgccc ttcttgcatg
     3481 ttgcttctcc ttaacacgca ctatcgatcc ccatgttcgg gggaaaaatg aggccgctat
     3541 aaatagcaga tgcttttccg gatagcaatt atctaaacgt aacacttgac aactgtgtga
     3601 ggaaaagcgt atttgcgcac gcgaccagaa tgtaaattaa ccagttactt actttactac
     3661 aatgtaaccg gcagtgattt tttaagagcc atgccttcag cagaaatttc cgctttgtaa
     3721 gccagaattt ctacccccct ctgttgagct tctgacaata gttgcgcgta tttctcatcg
     3781 atgtggcgcg cgggtgaaaa ccgtgtaatg gctgaatgca gcacggcgaa aaagataacc
     3841 gcacgctggc cttcagccgc tacgttcatc aactcccgaa ggtgtttctg acctcgttca
     3901 gtgaccgcat cgggaaaata tccctgttcg ttctccgcta acgtaaccga tttcacttca
     3961 atatagcagt ctggacgcga atccgcctgc aacataaagt caatacggct gcgttctgcg
     4021 ccatatttta cttcgctttt cagcgagcta tagcctgaca gttctgaaat tgattcatta
     4081 aggatagcct ctttcgtcaa cctgttagcc caaagcgtat tgacgcaaat aaatgcgccg
     4141 ctctggcttt gagttagttc ccaggtgtgt gggtatttcc gtttggtgtt gtctgaagtc
     4201 gaataccaga cggtatcgcc acgcgttgca caaccggtca tcgcacccgt attcgggcag
     4261 tgtagcgtta attcgcgacc atcgggtgtg atcacatcgg ctaaaaaacg tttgtaacgc
     4321 tgaattagcg tcgcgcgctg tagaagggga gagaattcca ttgcgacaat ccttgttatt
     4381 gcattagcgc ccagcgtttt agcggcgtgt agcgtgtgcg tccacgggca aacgaggagg
     4441 cgtaaagggt gaactccgtc accgcataag accagttaaa acctggcggc gggattgtca
     4501 ccgcctcgct ggcgtcgcgc aataaggtaa tatgtggatg aaacggacga ttgctttgaa
     4561 aacaaccgct gcgggcagcc tgtgaacgga gcatattcgc cagctggatt aagccgcgtg
     4621 gcggctgacg catccctaac cacaccacac gcgaacgcag ccattgtccg gcgtcatcaa
     4681 gcgtgagtgt gaaaccaggt tgacgaatcc gtccggctaa aagagaaagc gccttctctt
     4741 tctcggcgct cacttcgcct aaaaatgcca gagtcagatg caaattatcg gcggcgaccg
     4801 gacgtcccgc ctcaggtggg aagtgtgtgg cgcgccagtg gataatctgt tcgcggattt
     4861 ctgcaggtaa gtcgatagca aagaacagac gttgcggttc agacatgtga ggcactcggt
     4921 tatgaattac cgcgatgcta caatgtggcg cgaagaatgt taaccctctg gagcgttttg
     4981 tgtcgtcgtt gcccgttgct gccgttttac ctgaattact taccgctctc gattgtgcgc
     5041 cgcaggtatt attaagtgcg ccgaccgggg ccgggaaatc aacctggctg ccgctgcaac
     5101 tgctggcgca tcccggcatt aacgggaaaa ttatcctgct ggagccgcgt cgtctggcgg
     5161 cgcgtaacgt cgcgcaacgg ctggaggagc tgcttaacga aaagccaggc gataccgttg
     5221 gctaccggat gcgtgcgcaa aactgcgtcg ggccgaatac ccgcctggaa gtagttaccg
     5281 aaggcgtgct gacgcggatg atccagcgtg acccggagtt gagcggtgtt ggattggtga
     5341 tccttgatga atttcatgag cgtagcttgc aggcggattt ggcgttggcg ctgttactcg
     5401 atgtgcaaca aggtctgcgt gatgacctta aactgctaat tatgtcggct acgctggaca
     5461 acgaccgctt gcagcaaatg ctgccagaag cgcccgtcgt catctcagaa gggcgctcgt
     5521 ttccggttga acgccgttat ttaccgctgc ccgcgcatca gcgttttgac gatgccgttg
     5581 cggtagccac cgctgaaatg ctgcgtcagg aaagcggatc attactgtta tttttacctg
     5641 gcgtcggaga aattcagcgt gtgcaggaac aactggcttc gcgcatcggc agtgatgtat
     5701 tgctctgccc gctgtatggc gcgttgtcgc tgaacgatca gcgaaaagcg atcctcccgg
     5761 caccgcaagg gatgcgcaaa gtggtgctgg cgaccaatat tgctgaaacc agtttaacca
     5821 tcgaaggtat tcgtctggtg gtggattgtg cccaggagcg tgtggcgcgt tttgatccgc
     5881 gcacggggct aacgcgactg attactcaac gcgttagcca ggcatccatg acgcagcgtg
     5941 ccgggcgcgc cgggcgtctg gagccgggta tctgcctgca tctaatcgcc aaagaacaag
     6001 cagaacgcgc tgccgcgcaa agtgaaccgg aaatcttaca aagcgatctt tccggtttgc
     6061 tgatggaatt actgcaatgg ggatgcagcg atccggcgca gatgagctgg ctggatcaac
     6121 cgccaacggt gaatctactg gccgcgaaac gcctgttaca aatgctgggg gcgctggagg
     6181 gtgaacggct tagtgcgcag gggcaaaaaa tggcagcgct gggtaacgat ccgcgtttag
     6241 cggcaatgct ggttagcgcg aagaacgacg acgaagctgc taccgcggca aaaattgccg
     6301 ccattctcga agagccgcca cggatgggca atagtgacct gggcgtggcg ttttcgcgca
     6361 atcaaccagc ctggcagcaa cgtagtcagc aactgttaaa acgcttaaac gtacgtggcg
     6421 gtgaggcaga cagttcgctt atcgcgccgc tacttgccgg ggcgtttgcc gatcgcattg
     6481 ctcgtcgccg tgggcaagat ggacgctatc aactggcaaa cggcatggga gcgatgctcg
     6541 atgccgacga cgcgctaagc cgccacgaat ggttgatcgc accgttatta ttgcagggca
     6601 gcgcctcgcc ggatgcgcgg attttactgg cgctgccggt cgatattgat gagttagtac
     6661 aacgctgccc gcagctggta cagcagtctg acactgtgga gtgggatgac gcgcaaggta
     6721 cgctgaaagc ctggcgtcgg ctgcaaatcg gtctgctgac ggtgaaagtg cagccgctgg
     6781 cgaaaccctc ggaagacgag ttgcatcagg cgatgcttaa tggcatccgt gataaaggtt
     6841 taagcgtgct caactggacg gcggaagcgg aacagctacg cttgcgtttg ttatgcgccg
     6901 caaagtggtt gccggaatat gactggccag cggttgatga tgaaagttta ttggcgacgc
     6961 tggaaacgtg gctgctgcca catatgactg gcgtacattc actacgcggc ctgaaatcac
     7021 tcgacattta tcaggcacta cgcggattac ttgattgggg aatgcagcaa cgtctggata
     7081 gtgaattgcc tgcgcattac actgtgccga cgggaagccg gatcgccatt cgttatcatg
     7141 aagataaccc gcccgcgctg gcggtgagaa tgcaagagat gtttggcgag gccaccaatc
     7201 cgacgatcgc ccaggggcgc gtgccgctgg tgctggagtt gctttcacct gcccaaagtc
     7261 cattacaaat cacacgagat ttgagcgcct tctggaaagg agcgtaccgt gaggtgcaaa
     7321 aagagatgaa agggcgttat cccaaacatg tctggccgga cgacccggca aatactgcac
     7381 cgacgcgacg gacgaaaaag tattcgtaag gttggttttc tccctctccc tgtgggagag
     7441 ggccggggtg agggcatcag cgcgcacgtt caccctcacc ctaaccctct ccctcaaggg
     7501 agaggggacc gatcgaacac aaattttgag agatatcttc ttctgtcttg taacagaaga
     7561 acagaaaatc gggcttttgc gcctgaatat tgcggagaaa aagcatggcc gggaatgacc
     7621 gcgagccaat tggacgcaaa gggaaaccga cgcgtccggt caaacaaaag gtaagccgtc
     7681 gtcgttacga agatgacgat gattacgacg attatgatga ctatgaggat gaagaaccga
     7741 tgccgcgcaa aggtaagggc aaaggcaaag ggcgtaagcc tcgtggcaaa cgcggctggc
     7801 tatggctact gctaaaactg gctatcgttt ttgccgtgct gatcgccatt tacggcgttt
     7861 atctcgatca aaaaattcgt agccgtattg atggcaaggt ctggcaactg cctgcagcag
     7921 tttatggccg aatggtcaat cttgagccag atatgaccat cagcaagaac gagatggtga
     7981 agctgctgga ggcgactcag tatcgtcagg tgtcgaaaat gacccgtcct ggcgaattta
     8041 ccgtgcaggc caacagcatt gagatgatcc gccgtccgtt tgatttcccg gacagtaaag
     8101 aagggcaggt gcgtgcgcat ctgacctttg atggtgatca tctggcgacc atcgtcaata
     8161 tggagaacaa ccgtcagttc ggctttttcc gtcttgatcc gcgtctgatc accatgatct
     8221 cctcgccaaa cggtgagcaa cgtctgtttg tgccgcgcag tggtttccct gatttgctgg
     8281 tggatacttt gctggcgaca gaagaccgcc atttctacga gcatgatggg atcagcctct
     8341 actcaattgg gcgtgcggtg ctggcaaacc tgaccgcagg tcgcacggtg cagggtgcga
     8401 gtacgctgac gcaacagctg gtgaaaaacc tgttcctctc cagcgagcgc tcttactggc
     8461 gtaaagcgaa cgaagcctac atggcgctga tcatggacgc gcgttacagc aaagaccgta
     8521 ttcttgagct gtatatgaac gaggtgtatc tcggtcagag cggcgacaac gaaatccgcg
     8581 gcttcccgct ggcaagcttg tattactttg gtcgcccggt agaagagcta agcctcgacc
     8641 agcaggcgct gttagtcggt atggtgaaag gggcgtccat ctacaacccg tggcgtaacc
     8701 cgaaactggc gctggagcga cgtaatctgg tgctgcgtct gctgcaacag caacagatta
     8761 ttgatcaaga actctatgac atgttgagtg cccgtccgct gggggttcag ccgcgcggtg
     8821 gggtgatctc tcctcagcca gcctttatgc aactggtgcg tcaggagctg caggcaaaac
     8881 tgggcgataa ggtaaaagat ctctccggcg tgaagatctt cactaccttt gactcggtgg
     8941 cccaggacgc ggcagaaaaa gccgccgtgg aaggcattcc ggcactgaag aaacagcgta
     9001 agttgagcga tcttgaaact gcgattgtgg tcgtcgaccg ctttagtggt gaagttcgtg
     9061 cgatggtggg aggttctgag ccgcagtttg cgggctacaa ccgtgcgatg caggcgcgtc
     9121 gttcgattgg ttcccttgca aaaccagcga cttatctgac ggctttaagc cagccgaaaa
     9181 tctatcgcct gaacacgtgg attgccgatg cgccaatcgc gctgcgtcag ccgaatggcc
     9241 tggtctggtc accgcagaac gatgaccgtc gttatagcga aagcggcaga gtgatgctgg
     9301 tggatgcgtt gacccgttcg atgaacgtgc cgacggtaaa tctggggatg gcgctggggc
     9361 tgcctgcagt tacggatacc tggatcaaac tgggcgtacc gaaagatcag ctgcatccgg
     9421 ttccggcgat gctgctgggg gcgttgaact taacgccaat cgaagtggcg caggcgttcc
     9481 agaccatcgc cagcggtggt aaccgtgcac cgctttctgc actgcgttcg gtaatcgcgg
     9541 aagatggcaa ggtgctgtat cagagcttcc cgcaggcaga acgcgctgtt ccggcgcagg
     9601 cggcgtatct gacactatgg accatgcagc aggtggtaca acgtggtacg ggtcgtcagc
     9661 ttggggcgaa atacccgaac ctgcatctgg cagggaaaac agggactacc aacaataacg
     9721 tagatacttg gtttgcaggc attgacggca gcacggtgac catcacctgg gcaggccgtg
     9781 ataacaacca gccgaccaaa ctgtatggag ccagcggggc aatgtcgatt tatcagcgtt
     9841 atctggctaa ccagacgcca acgccgctga atcttgttcc gccagaagat attgcagata
     9901 tgggcgtgga ctacgacggc aactttgttt gcagcggtgg catgcgtgtc ttgccggtct
     9961 ggaccagcga tccgcaatcg ctgtgccagc agagcgagat gcagcagcag ccgtcaggca
    10021 atccgtttga tcagtcttct cagccgcaac agcaacctgc tcagcaagag cagaaagaca
    10081 gcgacggtgt agccggttgg atcaaggata tgtttggtag taattaacat ctaagcgtga
    10141 aataccggat ggcgagttgc catccggtaa aataacatcc catctaagat attaaccctt
    10201 tcttttcatc tggttgttta ttaacccttc aggaacgctc agattgcgta ccgcttgcga
    10261 acccgccagc gtttcgaata ttatcttatc tttataataa tcattctcgt ttacgttatc
    10321 attcacttta catcagagat ataccaatgg cgcgttccaa aactgctcag ccaaaacact
    10381 cactgcgtaa aatcgcagtt gtagtagcca cagcggttag cggcatgtct gtttatgcac
    10441 aggcagcggt tgaaccgaaa gaagacacta tcaccgttac cgctgcacct gcgccgcaag
    10501 aaagcgcatg ggggcctgct gcaactattg cggcgaagca ctctgctact gcgactaaaa
    10561 cggatacacc aattgaaaaa acgccgcagt ctatttcggt tgtgacaaat gaagagatgc
    10621 agatgcatca atttcagtct gtaaaagaag cattaggtta tacacctggc gttacggtta
    10681 gcagtcgtgg tgcttctaat acatatgatt ttgttatcat tcgtggtttc tcatctgttg
    10741 gtctgaatca aaataattac cttgatggac taaaacttca gggcaacttt tataacgatg
    10801 ctgtgattga tccttacatg ctcgagaggg ttgaactgat gcgtgggccg acgtctgttc
    10861 tctatggaaa aagtaatcct ggtgggatta tttctatggt gagtaagcgt ccgaccactg
    10921 aacccctgaa agaaattcag tttaaaatgg ggacggataa tctgtttcag accggattcg
    10981 atttcagtga tgcactggat gataacggtg agttctctta ccgtttgacg ggcctcgctc
    11041 gctcaacaaa cgaacagcag aaaaactctg aatctcagcg ttataccatt gctccatcat
    11101 tctcatggcg tccagacgac aaaaccaatt ttactttcct gtcctatttc cagaatgaac
    11161 cagaaacggg ttattacggt tggttgccga aagaggggac cgttgagcca ttgcctaatg
    11221 gtaagcgtct accgactgac ttcaatgaag gtgcatcgaa taatacatac tcccgtaacc
    11281 agaaaatggt gggatatagt tttgaacatg gttttaatga caccttcacc gtgcgtcaga
    11341 atctgcgttt cagtgaaatg aaaacctcac agaaaagtgt ttatggcaca gggattgctg
    11401 gtgatggtca taccctaaac cgcgggacag tggtggataa tgagcgtcta caaaacttta
    11461 gcgttgatac ccaacttgaa agtaagtttg ctacaggtga cgtcgagcat actttgctga
    11521 caggggtaga cttcatgcgg atgcgtaatg atatcaatgc cagctttgga tccgcaccat
    11581 ccatcgatct ttataacaaa tatcaccctg aatactttgc atttggtagc gcagagccat
    11641 accagatgaa tgaaagcaaa caaacaggta tttatgttca ggatcaggcg gaatggaata
    11701 aatgggtatt cactctgggg ggacgctacg attggtctaa gcaagcgacc actgttcgtg
    11761 aaaactctta tacgccgact gaaggttata ttgagcgcaa tgatcatcag ttcacctggc
    11821 gcggtggtgt aaattactta ttcgataatg gtatttcacc ttactttagc tatagccagt
    11881 cctttgaacc gagtgctttc gatctgtgga gcaacccacg catttcctat aagccatcga
    11941 aaggtgaaca gtatgaagct ggcgtaaaat atgttccgaa tgatatgccg gtcgttgtta
    12001 cgggcgcagt ctatcaattg acgaaaacaa ataacctgac agcagaccca acaaacccat
    12061 tagcgcaagt cccagcaggt gagattcgcg ctcgtggtgt ggaacttgaa gcaaaagcgg
    12121 cgttaaatgc caatattaac ttgacggctt cttataccta caccgatgcg gaatacacca
    12181 aagacaccaa tctcaaaggt aaaactccag aacaagtacc ggagcatatg gcatctctct
    12241 ggggggatta taccttcaat gaagggccgc tttctggttt aacattggga acaggtggtc
    12301 gttttattgg ttccagctat ggtgatccgg caaacacttt taaagtgggt agcgcagctg
    12361 taatggatgc tgttgtaaaa tatgatctgg cacgctttgg tatggcggga tccagccttg
    12421 ctgtgaacgt caacaatttg ctcgatcgtg agtatgttgc cagttgcttc cagacttatg
    12481 gctgcttctg gggcgcagaa cgtcaggtcg ttgcaaccgc aaccttccgt ttctaatttc
    12541 tcttttgggg cacggatttc cgtgcccatt tcacaagttg gctgttatgc aggaatacac
    12601 gaatcattcc gataccactt ttgcactgcg taatatctcc tttcgtgtgc ccgggcgcac
    12661 gcttttgcat ccgctgtcgt taacctttcc tgccgggaaa gtgaccggtc tgattggtca
    12721 caacggttct agtaaatcca ctctgctcaa aatgcttggc cgtcatcagc ctccgtcaga
    12781 aggggagatt cttcttgatg cccagccgct ggaaagctgg agcagcaaag cgtttgcccg
    12841 caaagtggct tatttgccgc agcagcttcc tccggcagaa gggatgaccg tgcgtgaact
    12901 ggtggcgatt ggtcgttacc cgtggcatgg cgcgctgggg cgctttgggg cggcagatcg
    12961 cgaaaaagtc gaggaagcta tctcgctggt tggcttaaaa ccgctggcgc atcggctggt
    13021 tgatagtctc tctggcggcg aacgtcagcg ggcgtggatc gccatgctgg tggcgcagga
    13081 tagccgttgt ctgttgctcg acgaaccgac ctcggcgctg gatatcgccc accaggttga
    13141 tgtgctggcg ctggtgcacc gtttaagtca ggagcgtggc ctgacggtca ttgccgtgtt
    13201 gcacgatatc aatatggcgg cacgctactg tgattatctg gtcgccctgc gcggtggtga
    13261 aatgattgct cagggaacgc ctgcggaaat tatgcgcggc gataccctcg aaatgattta
    13321 tggcatcccg atgggtattt tgccgcatcc ggcgggtgct gcacctgtga gttttgttta
    13381 ttgatgagcg gcttacctct tatttcgcgc cgtcgactgt taacggcgat ggcgctttct
    13441 ccgttgttat ggcagatgaa taccgcccac gcggcggcta ttgatcccaa tcgtattgtg
    13501 gcgctggagt ggttgccggt ggaattactg ctggcgctcg gcatcgtgcc ttacggcgta
    13561 gcggatacca tcaactatcg cctgtgggtc agcgaaccac cattgccgga ctcagtgatc
    13621 gacgtcggtt tgcgcacaga acctaacctt gaactgctga ccgaaatgaa accgtcgttt
    13681 atggtctggt cggcaggata tggcccttca gcagaaatgc tggcacgtat tgcgccgggg
    13741 cgtggattta acttcagcga cggcaaacag ccgctggcga tggcgcgtaa atcactgacg
    13801 gaaatggcag atttacttaa cctgcaaagc gcagcagaaa cgcatttagc gcaatatgaa
    13861 gactttatcc gcagcatgaa accccgcttt gtgaagcgtg gtgcacgccc gttattgctg
    13921 acgacgctta tcgatccgcg ccatatgttg gtcttcggtc caaacagctt gttccaggaa
    13981 attcttgatg agtacggcat cccaaatgcc tggcaagggg aaaccaactt ctggggcagt
    14041 accgccgtca gtatcgatcg tctggcagcg tataaagacg ttgatgtgct ctgttttgat
    14101 cacgacaaca gcaaagacat ggatgcgcta atggcaaccc cgctgtggca ggccatgccg
    14161 tttgtccgcg ccggacgctt tcagcgcgta cccgcagtct ggttttatgg tgcgacgctc
    14221 tcggcaatgc actttgtgcg cgttctggat aacgccatcg gaggtaaagc gtgagtaaac
    14281 gaattgcgct tttcccggcg ttattgctgg cgctgctggt gattgtcgct acggcgctga
    14341 cctggatgaa cttttcgcag gcgctgccgc gtagccagtg ggcgcaggcc gcctggtcgc
    14401 cggatattga cgtcatcgag cagatgattt ttcactacag cttgctgccg cgtctggcga
    14461 tttcgctgct ggtgggcgca ggcctggggc tggtgggcgt gctgtttcag caagtgctgc
    14521 gtaatccgct ggcggaaccg acgacacttg gcgttgctac aggcgcgcaa ctggggatta
    14581 ccgtcactac gctctgggcg atcccagggg cgatggcgag tcagtttgct gcgctggcgg
    14641 gcgcttgcgt tgttggctta atcgtctttg gcgtcgcgtg ggggaaacgg ctttcgccgg
    14701 taacgctgat cctcgcgggg ctggtagtga gcctttattg tggggcaatc aatcagttac
    14761 tggttatctt ccaccatgac caactgcaaa gcatgttcct gtggagcacc ggaacgctga
    14821 cgcaaaccga ctggggcggt gttgagcgtt tatggccgca gttgctgggc ggtgtgatgc
    14881 tgacgttgct gctacttcgc ccgttaaccc tgatggggct tgatgatggc gtggcgcgca
    14941 atctcgggct ggccttgtcg ctcgcgcgtc tggcggcgct gtcgctggcg attgtcatca
    15001 gtgcgctgct ggtgaacgcg gtggggatta tcggctttat cgggttgttt gcgccgttgc
    15061 tggcaaaaat gctgggggcg cggcgtctgc tgccgcgact gatgctggcg tcgttgattg
    15121 gtgcgctgat cctctggctt tccgatcaaa tcatcctctg gctgactcgc gtgtggatgg
    15181 aagtgtccac cggttcggtc actgcgttga tcggtgcgcc gctgctactg tggctgttgc
    15241 cgcgtttacg cagcattagc gcgccggata tgaaggtcaa cgatcgtgtc gcggctgaac
    15301 gccaacatgt gctggcgttt gccctcgcgg gcggcgtgct gctgttgatg gctgtggtgg
    15361 tggcgctgtc gtttggtcgt gatgcgcacg gctggatgtg ggcgagcggg gcgttgctcg
    15421 atgatttaat gccctggcgc tggccgcgaa ttatggcggc gctatttgcg ggcgtcatgc
    15481 tggcggtggc gggctgtatt attcagcgac tgaccggcaa cccgatggca agcccggaag
    15541 tgctggggat tagctccggc gcagcgtttg gcgtggtact gatgctgttt ctggtaccgg
    15601 gtaatgcttt tggctggctg ttacccgcgg gaagtatcgg tgccgcggtg acgctgttga
    15661 ttattatgat cgccgccggg cgcggtggat tttccccaca ccgcatgtta ctggcgggga
    15721 tggcgttaag taccgcattc accatgcttt taatgatgtt gcaggcgagt ggtgacccgc
    15781 gaatggcgca agtgctcacc tggatctctg gttcgaccta caacgccacc gatgcgcagg
    15841 tctggcgtac cggaattgtg atggtgattt tgctggcgat taccccgctg taccgccgct
    15901 ggctgaccat tttacctctg ggcggtgata ccgcacgagc tgtgggaatg gcgctgacgc
    15961 cgacgcgaat tgcgctgctg ctgttagcgg cttgcctgac gacgacctcg acgatgacta
    16021 ttggaccgtt gagttttgtt ggtttaatgg caccgcatat tgcgcggatg atgggttttc
    16081 gacggacgat gccacacatc gtaatttcgg cgctggtggg tggtttactg ctggtattcg
    16141 ctgactggtg tgggcggatg gtgctgtttc cattccagat cccggcgggg ctgctgtcga
    16201 cctttatcgg cgcgccatat tttatctatt tgttgagaaa gcagagccgt taattgagtg
    16261 cctcgcccgg tgggcgaggc aaaattatca caacttcgca aatacccgac gtgcagcatc
    16321 gatggtgtta ttgatatctt ccatgctgtg cgccacagac ataaagcccg cttcaaacgc
    16381 tgacggtgcc aggtaaacac cttcgtccag catcatatgg aagaaacgct taaagcgttc
    16441 cacgtcacag gccatcacat cctgatagca cgtcacggac tcggcgtcgg taaagaaaat
    16501 accgaacatg ccgccaacgt ggttaacgac cagcggagtt ccggcttctt ctgccgcttc
    16561 cagcagacct tctgccagac gtgttgtcag ctcatccagc gtttcgtgaa cgcccggctg
    16621 cgcgacttca ttcagacagg cgaaacccgc tgccatcgca atcgggttac cggaaagcgt
    16681 acccgcctga tagaccggac ccgtcggggc cagcgcatcc attacatcac gacgaccacc
    16741 gaatgcgcct accggcattc caccgccgat gattttgccg aggcaggtta aatctggcac
    16801 tacgccgtaa taatcctgtg cgccagccag tgccacgcgg aagccggtca tcacttcatc
    16861 gatgatcagc aacgcgccaa attcgtcgca cagcgcacgc agacctggca ggaactctgg
    16921 ctgcggcgga acacagttca tattgcctgc caccggctcg acgataatac aggcaatctc
    16981 ttgcgggtat tgctcaaacg cggcgcgtac agaagccaga tcgttataag tacaggttaa
    17041 ggtatgtttg gcgaaatctg ccggaacacc cggcgagttt ggctggccta acgtgagtgc
    17101 gccagaaccg gctttcacca gcaggcagtc agcgtgaccg tggtaacaac cttcaaattt
    17161 aatgattttg tcgcgaccgg taaaaccacg ggccaggcgg atggcgctca tggtcgcttc
    17221 agtgccggag ttcaccatgc gcaccatatc catggtcggg accagttcgg tcaccagttg
    17281 cgccattttc acttccattt cggtcggtgc accaaagctt aaaccacgct cggcggcttc
    17341 aatcacggca ttgcggatag ccggatggtt atggcccagc accatcggcc cccaggaacc
    17401 gacataatcg atataggctt tgccatcaac atcgtacaga taagcgccgt ccgctttttc
    17461 gataaacagt ggagtgccgc ccacgccagt aaaggcgcga acaggggagt tcacaccgcc
    17521 agggagcagc tcgcgcgctg cgctgtaaag attttcagac ttactcatgg agggttcctg
    17581 attcgtagaa aaagtgaatg gctgctattc tatgttattc ataacaagtt aaatactcgt
    17641 caaacatcag gctgcttgta ctggtgcaat cctgatttct tagagtataa aagttttgtg
    17701 catttgaaac attacgcttt gcaaaggatt ttcatggaac gtgcgagtaa aatgccgtca
    17761 tcttatttgt atgaccaata agtgatcatt ggatgaaaac tgatactccc tctttagaaa
    17821 caccgcaggc cgcgcgcctg cgacgcagac aactgattcg ccaacttctt gagcgcgata
    17881 aaaccccgtt agccattttg tttatggcgg cagtcgtcgg cacgcttgtc gggctggcag
    17941 cggttgcttt tgacaaaggt gtcgcctggt tgcagaacca acgtatggag gcgctggtac
    18001 atactgctga taattatccg cttctgttaa ccgtcgcttt tctctgttcg gcggtgctgg
    18061 cgatgttcgg ctactttttg gtgcgcaaat acgcgccgga agcaggtggt tcggggatcc
    18121 cggaaattga aggggcgctg gaagatcaac gtcccgttcg ctggtggcgt gtgttgccgg
    18181 tgaaattctt tggcgggctg gggacactcg gcggaggcat ggtgctgggg cgcgaagggc
    18241 caaccgtgca gatcggcggc aatatcggtc gcatggtact cgatattttc cgcctgaaag
    18301 gtgatgaagc tcgccatacg ctgctggcaa ccggtgctgc tgcggggctg gctgcggcct
    18361 ttaacgcgcc gctggcgggt attttgttta ttatcgaaga gatgcgtccg cagtttcgct
    18421 atacgttaat ttcgattaaa gcggtattta ttggcgtcat tatgtcgacc attatgtacc
    18481 ggatttttaa tcatgaagtt gcgttgattg acgtcggtaa actttctgat gcgccgctta
    18541 atacgctgtg gctttatctg atcctcggta ttatttttgg cattttcggc cctattttta
    18601 ataaatgggt gctggggatg caggatttgc tgcaccgtgt gcacggcggc aatattacca
    18661 aatgggtgct aatgggcggt gcgattggcg gtctgtgtgg attgctgggg tttgtggcac
    18721 cagcaacgtc gggcggcggt tttaacctga ttcctatcgc taccgcaggg aatttcagca
    18781 tgggaatgct ggtgtttatc ttcgtcgcgc gggtcattac caccttactg tgcttctctt
    18841 ccggcgcgcc gggcggtatt tttgccccga tgctggcgct gggtactgtg ctgggaaccg
    18901 ctttcggaat ggttgtcgtt gagctgtttc cgcaatatca ccttgagtcg gggacttttg
    18961 ctattgccgg aatgggggcg ttactggcgg catctattcg cgcgccgtta acggggatca
    19021 ttttggttct ggagatgacc gataactacc agctcatttt gccaatgatt attaccggtc
    19081 ttggcgcaac actattagcg caatttaccg gcgggaaacc gctatattcg gagattcttg
    19141 cgcgcacgct ggcaaaacag gaagctgagc aactggcgcg aagcaaggcc gcatcagcca
    19201 gcgagaatac ttgaacgaaa taccagggta ttagataatg gcgattatta ttgggttaga
    19261 atttgcccaa ttgccgatgt cgtttggagc aaaatatgag tgatgacgta gcactgccgc
    19321 tggagtttac cgacgcagca gccaacaaag ttaaaagcct gatcgctgac gaagataacc
    19381 cgaatctgaa attacgcgtg tatatcaccg gtggcggttg cagcggcttc cagtatggtt
    19441 tcacctttga tgatcaggtg aacgaaggcg atatgaccat cgaaaaacag ggcgttggcc
    19501 tggtggttga tccgatgagc ctgcaatatc tggtcggtgg ttccgttgac tataccgaag
    19561 gactggaagg ttctcgtttc atcgtgacca acccgaacgc gaaaagcacc tgcggttgcg
    19621 gttcttcctt tagcatctaa tctgttgttc atgtgccgga taaactatcc ggcacatctt
    19681 ctctcttcaa cgcccattct catccagcgc aaacgtcggt agcttaagat gccaacgaat
    19741 agccgccagc cgaatcaata gcgtcacgac catgcccatc atactggctg tttccagtgg
    19801 tacggaaaat gtgtaataag ccgtagcgtg gacaataccg ccgataatac aggcagttgc
    19861 gtagatttct gtacgtaaaa tcatggggat ttcgcgggcc agtacatcac gaatgatccc
    19921 gccgccaacg ccagtaatga cgcccataca aaccgcgatt aacggaccgg cttccgcatt
    19981 aaaggcttta ttcacgccaa tgccgacaaa caccgccaga ccaacggcgt ccagcaccgg
    20041 caacatccat tttggtaagc gtcttggctg gcgcaccagc acgatggtca gcatgctggt
    20101 taccattgca acgaccagat cggtgggatc tttcacccaa aataccgggc cgtgatccag
    20161 cgccatgtcg cgaattgtcc cgccgcctac agcggtaacc acgcccagta ccagaacacc
    20221 aaaagggtcc atacgcaatt ttccggctaa caaaacgccg gagatggcaa ataccgctgt
    20281 gccgactata tccagccaat agacgagcat tgttcaatcc ccactgagca cctaaaaagg
    20341 tcaggcgcta atctacctgt gaaagcgcat tacagagctg ttgtgcagcg aggataatac
    20401 gtgggcttgc acgtcaaacc agtcactcgt gagaggaata acgggaattt tgagctgttc
    20461 accccagtat tgtttgattt taggaatttg gtccggtccg cctgtaatga caatcgcctg
    20521 tggcgagcgt gctaacacct gttcgcggct aacttgcggc caaggaaccc ggctgtcttt
    20581 aaagatgttt tctccgccac aaacttcgag tacctggttt tgaatcgact cttttccact
    20641 ggtaaatggc ggattaatgc cgaattgcag aaaaacacgt tttttaggtt tatcagcata
    20701 ttgcgctttc aattgcgcgt actgatccag cagggattgc gcggcttgtt cggccttatc
    20761 cggttgcgga ctccaggggg ccagttgacg taacgcattg gcaatttgtt caatgcttgt
    20821 cgcatcgacc cacatcactt ttattcccgg cgaagccagc tggtcaacct gccgctcggc
    20881 attacctcca cgccaggcaa tcaccagatc gggtttcagc gcgacaatgc gttccagatt
    20941 catcccctgc caggtggaaa cctgctcaat cttttgcgct tgtggaggat agtcggaata
    21001 gctgctgacc ccaaccggcg tgatcccggc ggcaaaggca agttcagtgt tggcgggaga
    21061 aagcgtgatg acgcgcggtg ccgcgttgag ccacagtggc gcgagaaaag acagggcgac
    21121 cagcgccctg aacagtgact tagccatgtg ccagtttctg caccagtgac tcaaccatca
    21181 ggctggactg tttagcggca acagccagga actcatcgaa gctaagatga gactgttgat
    21241 cggccacgtc ggagatggcg cgtacgacaa caaacgggac gttgaaattg tggcagacat
    21301 gggcgattgc cgtcgcttcc atctctacag caatggcctg tgggaagttg tggcggattt
    21361 tcgccagacc aacagaaccg ttgatgaaag cgtcgccgct aacaatcagg ccacgtacag
    21421 cgttaagatt cagttcggca atgcaggcct cagcggcagc gatcagttta tcgtcagctt
    21481 taaagcctgc cggacagcct ggtaactgac cgtattcata accaaatgcc gtgacatccg
    21541 cgtcgtgata acgtgcttcg tccgagacaa cgatatcgcc cactttcaac gttggtgcca
    21601 ggccaccggc agaaccggtg ttaataatca catctggctt gccgtgttcc aacagcaaag
    21661 tggcacccag cgccgcagcg actttaccga tgcccgattt cagaagcgca acctcggttc
    21721 cattcagttg gccggtatag atttcgcaac cgccgagact gatagtttga cgattttcga
    21781 ttttgtcacg cagcagcgta acttcttctt ccattgcacc aatgatgccg attttcatag
    21841 atttactcgc gataagcccg atttgaaggc atagtttacc atgcgcttac ggggaagcgt
    21901 atttctcacg cgggagagga catggcacag attgatttcc gaaaaaaaat aaactggcat
    21961 cgtcgttacc gttcaccgca gggcgttaaa accgaacatg agatcctgcg gatcttcgag
    22021 agcgatcgcg ggcgtatcat caactctccg gcaattcgtc gtctgcaaca aaagacccag
    22081 gtttttccac tggagcgcaa tgccgccgtg cgcacgcgtc ttacccactc gatggaagtc
    22141 cagcaggtgg ggcgctacat cgccaaagaa attctaagcc gtatgaaaga gcttaaatta
    22201 ctggaagcat acggcctgga tgaactgacc ggcccctttg aaagcattgt tgagatgtca
    22261 tgcctgatgc acgatatcgg caatccgccg tttggtcatt ttggcgaagc ggcgataaat
    22321 gattggtttc gccagcgttt gcacccggaa gatgccgaaa gccagcctct gactgacgat
    22381 cgctgcagcg tggcggcact acgtttacgg gacggggaag aaccgcttaa cgagctgcgg
    22441 cgcaagattc gtcaggactt atgtcatttt gaggggaatg cacaaggcat tcgtctggtg
    22501 catacattga tgaggatgaa tctcacctgg gcacaggttg gcggtatttt aaaatatacc
    22561 cgtccggcgt ggtggcgtgg cgaaacgcct gagacacatc actatttaat gaaaaagccg
    22621 ggttattatc tttctgaaga agcctatatt gcccggttgc gtaaagaact taatttggcg
    22681 ctttacagtc gttttccatt aacgtggatt atggaagcag ccgacgacat ctcctattgt
    22741 gtggcagacc ttgaagatgc ggtagagaaa agaatattta ccgttgagca gctttatcat
    22801 catttgcacg aagcgtgggg ccagcatgag aaaggttcgc tcttttcgct ggtggttgaa
    22861 aatgcctggg aaaaatcacg ctcaaatagt ttaagccgca gtacggaaga tcagtttttt
    22921 atgtatttac gggtaaacac cctaaataaa ctggtaccct atgcggcaca acgatttatt
    22981 gataatctgc ctgcgatttt cgccggaacg tttaatcatg cattattgga agatgccagc
    23041 gaatgcagcg atcttcttaa gctatataaa aatgtcgctg taaaacatgt gtttagccat
    23101 ccagatgtcg agcagcttga attgcagggc tatcgggtca ttagcggatt attagagatt
    23161 tatcgtcctt tattaagcct gtcgttatcc gactttactg aactggtaga aaaagaacgg
    23221 gtgaaacgtt tccctattga atcgcgctta ttccacaaac tctcgacgcg ccatcggctg
    23281 gcctatgtcg aggctgtcag taaattaccg tcagattctc ctgagtttcc gctatgggaa
    23341 tattattacc gttgccgcct gctgcaggat tatatcagcg gtatgaccga cctctatgcg
    23401 tgggatgaat accgacgtct gatggccgta gaacaataac caggcttttg taaagacgaa
    23461 caataaattt ttaccttttg cagaaacttt agttcggaac ttcgcgctat aaaacgaatc
    23521 tgaagaacac agaaattttg cgttatctgt taatcgagac tgaaatacat gaaaaaaacc
    23581 acattagcac tgagtgcact ggctctgagt ttaggtttgg cgttatctcc gctctctgca
    23641 acggcggctg agacttcttc agcaacgaca gcccagcaga tgccaagcct tgcaccgatg
    23701 ctcgaaaagg tgatgccttc agtggtcagc attaacgtag aaggtagcac aaccgttaat
    23761 acgccgcgta tgccgcgtaa tttccagcag ttcttcggtg atgattctcc gttctgccag
    23821 gaaggttctc cgttccagag ctctccgttc tgccagggtg gccagggcgg taatggtggc
    23881 ggccagcaac agaaattcat ggcgctgggt tccggcgtca tcattgatgc cgataaaggc
    23941 tatgtcgtca ccaacaacca cgttgttgat aacgcgacgg tgattaaagt ccagctgagc
    24001 gatggccgta agttcgacgc gaagatggtc ggcaaagatc cgcgctctga tatcgcgctg
    24061 atccaaatcc agaacccgaa aaacctgacc gcaattaaga tggcggattc tgatgcactg
    24121 cgcgtgggtg attacaccgt agcgattggt aacccgtttg gtctgggcga gacggtaact
    24181 tccgggattg tctctgcgct ggggcgtagc ggcctgaatg ctgaaaacta cgaaaacttc
    24241 atccagaccg atgcagcgat caaccgtggt aactccggtg gtgcgctggt taacctgaac
    24301 ggcgaactga tcggtatcaa caccgcgatc ctcgcaccgg acggcggcaa catcggtatc
    24361 ggttttgcaa tcccgagcaa catggtgaaa aacctgacct cgcagatggt ggaatacggc
    24421 caggtgaaac gcggtgagct gggtattatg gggactgagc tgaactccga actggcgaaa
    24481 gcgatgaaag ttgacgccca gcgcggtgct ttcgtaagcc aggttctgcc taattcctcc
    24541 gctgcaaaag cgggcattaa agcgggtgat gtgatcacct cactgaacgg taagccgatc
    24601 agcagctttg ccgcactgcg tgctcaggtg ggtactatgc cggtgggcag caaactgacc
    24661 ctgggcttac tgcgcgacgg taagcaggtt aacgtgaacc tggaactgca gcagagcagc
    24721 cagaatcagg ttgattccag ctccatcttc aacggcattg aaggcgctga gatgagcaac
    24781 aaaggcaaag atcagggcgt ggtagtgaac aacgtgaaaa cgggcactcc ggctgcgcag
    24841 atcggcctga agaaaggtga tgtgattatt ggcgcgaacc agcaggcagt gaaaaacatc
    24901 gctgaactgc gtaaagttct cgacagcaaa ccgtctgtgc tggcactgaa cattcagcgc
    24961 ggcgacagca ccatctacct gttaatgcag taatctcact caaccccttc ctgaaaacgg
    25021 gaaggggttc tccttacaat ctgtgaactt caccacaact ccatacatct tcatcatcct
    25081 ttaggcattt gcacaatgcc gtacgttacg tacttcctta tgctaagccg tgcataacgg
    25141 aggacttatg gctggctggc atcttgatac caaaatggcg caggatatcg tggcacgtac
    25201 catgcgcatc atcgatacca atatcaacgt aatggatgcc cgtgggcgaa ttatcggcag
    25261 cggcgatcgt gagcgtattg gtgaattgca cgaaggtgca ttgctggtac tttcacaggg
    25321 acgagtcgtc gatatcgatg acgcggtggc acgtcatctg cacggtgtgc ggcaagggat
    25381 taatctaccg ttacggctgg aaggtgaaat tgtcggcgta attggcctga caggtgaacc
    25441 agagaatctg cgtaaatatg gcgaactggt ctgcatgacg gctgaaatga tgctggaaca
    25501 gtcgcggttg atgcacttgt tggcgcagga tagccgtttg cgggaggaac tggtgatgaa
    25561 cctgattcag gcagaggaga atactcccgc acttactgaa tgggcgcaac ggctggggat
    25621 cgatctcaat caaccgcgag tggtggctat tgttgaggtc gacagcggtc agcttggtgt
    25681 ggacagcgca atggcggagt tacaacaact gcaaaacgcg ctgactacgc ccgagcgtaa
    25741 taatctggtg gcgattgtct cgctaaccga aatggtggtg ttgaaaccgg cgttgaactc
    25801 ttttgggcgc tgggatgcag aagatcatcg taagcgagtt gaacaactga ttacccgcat
    25861 gaaagagtac ggccggctgc gttttcgcgt ttcactgggc aactatttta ccggtcctgg
    25921 cagtattgcc cgatcctatc gtacggcgaa aacgacgatg gtggtgggta aacagcggat
    25981 gccagaaagt cgctgctatt tttatcagga tctgatgtta cctgtgttac tcgacagttt
    26041 gcgtggcgac tggcaggcca acgaactggc gcgaccgctg gcgcggctga aagcgatgga
    26101 caataacggc ttgctgcgac gaacgctggc ggcgtggttt cgtcacaatg tgcaaccgct
    26161 ggcaacgtca aaggcgttgt ttatttatcg taataccctg gagtatcggc ttaatcgtat
    26221 atcggaactg accgggcttg atttgggcaa ttttgatgac aggttgctgc tgtatgtggc
    26281 gttacaactg gatgaagagc ggtaggttat gcgttaaggt tgaggcggcg ctgtctcatt
    26341 tccctcagcc cgaaggggag aggggaatgc ccgaattaac cgtcaattcg ggattattta
    26401 cgcgttagtt tttccagatc ggcttcaatc tcgctgatct tattggttac gactgactcc
    26461 aggtgacgta agtcgtcgag gatcttacgc ttaagatcaa cttcgctgcg gtcacgctgg
    26521 cagatttgat caagctcatc aatgatatac cgtagattcg ggctgatttc ctggacttct
    26581 ttataaccct gacccacacc atcagcgacg accgttttac gctgacgcgg atatttaaac
    26641 ttaacgctct tggcgaaaaa ctcgcctttg tctttctgga aatagatttt cagaatatcg
    26701 ttgttggctt cctgccggag gctgtaacga tcaatttctt caggattggt aatacccaga
    26761 cttttcagat tgtcgtacat agcgttacct caaaatgagt cagtaaattg tgcttatttt
    26821 agcatttggc ctagcccgcc cggctcgact gtgatcgcag aaagcctttt tcttccagac
    26881 ttctatcatg gcgtaaaaat caaaaaatta cctgctttat tgtggtgata aaattcacgt
    26941 tctacaccag ttccagcatc gttacttccg ggcggcagtt cagacgcaaa ccatacaaac
    27001 tgcccacgcc acgggttgtg tagatgtgtc gttcgccaaa ggcatttaat ccggcgacgt
    27061 aacgtttatc ttcgacaggg gcaaaaggtt ctccaaccaa cggtacgcgc agttgcccgc
    27121 cgtgagtatg gccgcacagc atcagatccc agggttcatc acgcatgact tctttgctgt
    27181 cgggattatg tgccagcatc agtcttggca gatttgcttc gctggcggga ggtggtttgc
    27241 attgtccggc ccataagtca ccggtgccta ccagttcgaa ttgcctgttc ggcgtggcga
    27301 tcaccgtagc ctggttaaac aacaccgtga tgcccactga tttcaacgtc tcgccaatta
    27361 agtgattttt ttctgtacca acagggcgat cgtggttgcc gaagcaggca aacgtcggcg
    27421 cacattcggc aaggggggag aggacatcac taaacgccga aaaattcagc ggcatatcaa
    27481 ataatacgta atcgccgccc agtaatatca aatcgggctt ttgttctatg ccaagagcaa
    27541 tcgcgtcaga aatcaggctt aaaggaacaa aacgagagta atggagatcg gccagaaaaa
    27601 gaattttgaa tggtgctgcg ttgtctttaa aaaaggcgag gcggtgacgg attaattcaa
    27661 accagcctgg ctcccagtaa tgcatataac cgaaacctga gctcgtggct atcgtcgcgg
    27721 cagtagcctg caacaatcgg cggcgtgaaa tcatcgctca tccctgcaaa aaaaatcggg
    27781 cagcgtcgtg ctgcccgtgt gcatactttt agtcgatggt acgcagcagt tcgttaatgc
    27841 cgactttgcc gcgagttttc gcgtcaactt tcttaacgat aaccgcacag tagaggctgt
    27901 atttgccatc ttttgacggc agattacctg aaacaaccac agaccccgcc ggaacgtgac
    27961 cgtagtggat ttcgccggtt tcacggtcgt aaatacgggt gctctgacca atgtatacgc
    28021 ccatggaaat gacggaacct tcttcgacaa tcaccccttc aactacttca gagcgtgcgc
    28081 caatgaagca gttatcttca atgatggttg ggttagcctg cagcggttcc agcacgccgc
    28141 cgatgcccac gccaccggaa aggtggacgt ttttaccaat ctgcgcacaa gaaccgacgg
    28201 tcgcccaggt atcaaccatg gtgccttcat caacatatgc gccgatgttg acgtaagacg
    28261 gcatcagcac ggtgttacgg gcaataaacg caccctgacg taccgccgct ggtggcacaa
    28321 cgcggaagcc ttctttctgg aaacgtgctt cgtcgtagtc ggcgaatttc attggcactt
    28381 tgtcgaagta gcggctttct gccccttcga tcacctgatt atcattaata cggaaagaga
    28441 gcagcaccgc ttttttcaac cactgatgcg tcacccactg accgtcaatt ttttccgcta
    28501 cacgcagtgc accggaatcc agcagggcga tcacctgatt taccgcttcg cgggtaacgg
    28561 tgtctgcgtt ggttggcgtg atctcggcac ggcgttcaaa agcggtttca ataatgttct
    28621 gtaactgctg cattgttaaa ctcttttcat atcagtaaac acatcaccct ttatcgtttg
    28681 gattgagggc ctctgtcaac cgctgatgca cttcctgctg caactcgtta ttaagcgcac
    28741 gccggtcagc ggtggcaatt atgaataaat cttctactcg ctcgccaatg gttgtaattc
    28801 gggcaccatg aagcgaaatt cccagatcgg caaaaatttt cccgactctc gccagcagtc
    28861 ctggctggtc gagcgcgata agctcaagga acgatttgcg gtcggtatgg gtcggcaaaa
    28921 acgttacttc ggtttcaaca gtaaaatggc gtaatttggc gggttggcga cggggctgcg
    28981 gtggctgcca gctactttgc gtcagtactt gctccagacc aaaccgaata acctcatgac
    29041 gatctgcgga cagcgggctg ccatcgggtt ccagcacgat aaaggtatcc atcgccatac
    29101 cgtcgcgagt ggtgaaaatt tgtgcgtcgt gaacacttaa attgcggcgg tctaattcgg
    29161 cacagacggc ggcaaacaga taggggcggt ccgggctcca gataaaaatc tcggtgcctc
    29221 cacgcgtagc ctgcgggcta agcaatacca gtggtttgct taaatcatgc tgtaataaat
    29281 ggcgggcatg ccaggccagt tgatttgggc tatggcggac aaaatagtta gcacgacagc
    29341 gtgaccaaat ttggtgcagc gcctcttcgt cgatgttatc catgcgcagt agtgccagtg
    29401 cctggagttg gtgatggcga acccgttcgc gcatatccgg cgtgttttgc attccgcgtc
    29461 gtagctgctt ttcggtggca aaatagagtt cgcgcaacag actttgcttc cagctattcc
    29521 acagcgtttc gttggtggcg caaatgtcag ccactgtcag gcataccaga tagcgcagac
    29581 gattttccgt ttgaacttct tcggcaaact gcttgatgac ttcagggtcc tgaatatcgc
    29641 ggcgttgtgc tgtcaccgac atcagcaagt gctggcgaac cagccaggca accagctgtg
    29701 tttcgcgtga gttcagcccg tggagttctg caaaatgcac tacatcctga gcaccgagaa
    29761 tggagtggtc gccgccgcgt cctttggcga tatcgtgaaa cagcgcggcg atgaaaatca
    29821 gctcagttga cggcaggcgc ggccagacgt ccacacacaa cggatggcgc tggcgcgttt
    29881 cttcactggc aaaactctcc agtttcagca tcacgcggat agtatgttca tccaccgtgt
    29941 aggcgtggaa cagatcaaac tgcatctgcc cgacgatatg cgaccattgc ggcatatacg
    30001 cgccgagcac gctatggcga tgcattggca atagcccgcg ccgcaccgct ccggggtgac
    30061 gcagaatgct caaaaacagt tttcgtgctt ccggaatatt acacagcggt tgttgcagat
    30121 ggcgacgggc atggcgtaac tggcgcagcg tggtggagta aatgccggtg atcgcactgt
    30181 tgcgcaccat ggtgtagaac atacgcaaga tggcttccgg ctggcgcata aatagtgttt
    30241 catcacgcag gtcgattagc gtaccgcgta gctgaaactc atcgtcgatt ggacgtggtt
    30301 tttcgtcggc aggaagggcg aggatggctt catcgaacag ttgcagcagc atctggttga
    30361 gttcactgac gcggcgtgta acgcggaagt aatccttcat catccgctcg accggttcgt
    30421 tgccttcacc actgtaattc agacgctgag cgacgctaag ttggcgatcg aataacaggc
    30481 gattatcgta acggctgacg accagatgca gggcaaagcg aatacgccac agtatatgca
    30541 gacattcgtt taattccgcc cgctccgctg aggttaagaa gccaaaccca accatttcat
    30601 ccagcgatgt tgcgccaaaa tgacggcggg ccacccattg cagagtgtgg atatcgcgca
    30661 agccgccagg gctacttttg atgtctggtt caagattgta gctggtgccg tggtaacgct
    30721 gatggcgctg gttctgttct tcaactttcg ccgcgtagaa cttgtcggaa ggccagaatc
    30781 cttcgctaaa aatatgtttt tgcagttcga ggaagagcgc aacatcgcca attaataagc
    30841 gggattcgat taaattggtg gcgacggtta aatccgataa cccttccagc atgcactctt
    30901 caagcgtgcg cacactatga ccgacttcca gctttacatc ccagagcagc gttaacagct
    30961 cgcccacttt ttgcgcctga tcgtccggga gctttttacg gcttaaaatc agtaaatcga
    31021 tgtcagaaag tggatgcagc tcgccacgac cgtagccacc gacggcgacc aatgccaggt
    31081 cggcaatctg gctgaatccc gcttcaatcc ataatcgttg caggagctgg tcgataaact
    31141 cggtgcgcgc ctcaatcaac tgttctgcag agatcccatt gtcaaaggca tcacccagcc
    31201 aacgctggaa agtatcgata tgggctttta tcccaccgac ggttaattca tcacggggcc
    31261 agacgcatgg attttgcggt tgaccgggca gggtggggag agcggtgttt gcgtactgtt
    31321 ctggaagggt attcattgtg cgccactcat aagattaaat tatcgcatta aaaaagccgg
    31381 cattcgccgg cttcatctta ttcgtcgtgc gagattatcg ccgggatggt gtcatccttg
    31441 cgtagcgtca gaatttcgca gccgttatca gtcaccacaa tagtatgctc atattgtgca
    31501 gacaagctgc gatctttggt ttttaccgtc cagccatctt tcatggtgcg gatctctttt
    31561 ttacccgcgt tgaccattgg ctcgatggtg aacgtcatcc caggtttcag tacgacgttg
    31621 gtttcacggg agtcatagtg cagcacctgc ggttcttcat ggaagccgcg accaataccg
    31681 tgtccgcaat attcacgaac gacggagaag ccttctgctt cgacaaactt ctgaatcgcc
    31741 gcaccgattt cgcgcaggtt aatgcctggt ttgaccatgc gcagcgccag gtacaggctt
    31801 tcttgcgtga tgcggcacag acgttcgccc atgatggtcg gcttaccgac gataaacatt
    31861 ttcgaggtat cgccgtggaa accatctttg attacggtga catcaatgtt aacgatatcg
    31921 ccatctttca gcagcttcgc atcgtccggg ataccgtggc acaccacttc attaatagag
    31981 atgcaaacgg atttcggata gccgtgatag ccgaggcagg cagaaaccgc gtgttgttca
    32041 ttaacaatgt aatcattaca gatgcgatcc agctcgccgg tgctgacgcc cggtttaaca
    32101 tacggttcga tcatctccag cacttcggca gccagtcggc cagcgacgcg cattttttcg
    32161 atatcttctg gggtcttgat tgagatagcc attaattctg tccatcagcg tcggtgatac
    32221 cgacaatata tatgtaagtg ccgtcaatgg tatcacaccc gggcaaattg agaatcattc
    32281 tgaatttcgc caaacgtgcc actgaacgtt ttctataata gaaaattcaa cgtctgatgc
    32341 tgtacacagc gccaacaatt attggtgtcc atgacgtatt tgtggtataa agcgcgccgg
    32401 acttccgatc catttcgtat acacagactg gacggaagcg acaatctcac tttgtgtaac
    32461 aacacacacg tatcggcaca tattccgggg tgccctttgg ggtcggtaat atgggatacg
    32521 tggaggcata accccaactt ttatatagag gttttaatca tggcaactgt ttccatgcgc
    32581 gacatgctca aggctggtgt tcacttcggt caccagaccc gttactggaa cccgaaaatg
    32641 aagccgttca tcttcggtgc gcgtaacaaa gttcacatca tcaaccttga gaaaactgta
    32701 ccgatgttca acgaagctct ggctgaactg aacaagattg cttctcgcaa aggtaaaatc
    32761 cttttcgttg gtactaaacg cgctgcaagc gaagcggtga aagacgctgc tctgagctgc
    32821 gaccagttct tcgtgaacca tcgctggctg ggcggtatgc tgactaactg gaaaaccgtt
    32881 cgtcagtcca tcaaacgtct gaaagacctg gaaactcagt ctcaggacgg tactttcgaa
    32941 aagctgacca agaaagaagc gctgatgcgc actcgtgagc tggagaaact ggaaaacagc
    33001 ctgggcggta tcaaagacat gggcggtctg ccggacgctc tgtttgtaat cgatgctgac
    33061 cacgaacaca ttgctatcaa agaagcaaac aacctgggta ttccggtatt tgctatcgtt
    33121 gataccaact ctgatccgga cggtgttgac ttcgttatcc cgggtaacga cgacgcaatc
    33181 cgtgctgtga ccctgtacct gggcgctgta gctgcaaccg tacgtgaagg ccgttctcag
    33241 gatctggctt cccaggcgga agaaagcttc gtagaagctg agtaataagg cttgataact
    33301 cccccaaaat agttcgagtt gcagaaaggc ggcaagctcg agaattcccg ggagcttaca
    33361 tcagtaagtg accgggatga gcgagcgaag ataacgcatc tgcggcgcga aatatgaagg
    33421 gggagagccc ttatagacca ggtagtacac gtttggttag ggggcctgca tatggccccc
    33481 tttttcactt ttatatctgt gcggtttaat gccgggcaga tcacatctcc gaggatttta
    33541 gaatggctga aattaccgca tccctggtaa aagagctgcg tgagcgtact ggcgcaggca
    33601 tgatggattg caaaaaagca ctgactgaag ctaacggcga catcgagctg gcaatcgaaa
    33661 acatgcgtaa gtccggtgct attaaagcag cgaaaaaagc aggcaacgtt gctgctgacg
    33721 gcgtgatcaa aaccaaaatc gacggcaact acggcatcat tctggaagtt aactgccaga
    33781 ctgacttcgt tgcaaaagac gctggtttcc aggcgttcgc agacaaagtt ctggacgcag
    33841 ctgttgctgg caaaatcact gacgttgaag ttctgaaagc acagttcgaa gaagaacgtg
    33901 ttgcgctggt agcgaaaatt ggtgaaaaca tcaacattcg ccgcgttgct gcgctggaag
    33961 gcgacgttct gggttcttat cagcacggtg cgcgtatcgg cgttctggtt gctgctaaag
    34021 gcgctgacga agagctggtt aaacacatcg ctatgcacgt tgctgcaagc aagccagaat
    34081 tcatcaaacc agaagacgta tccgctgaag tggtagaaaa agaataccag gtacagctgg
    34141 atatagcgat gcagtctggt aagccgaaag aaatcgcaga gaaaatggtt gaaggccgca
    34201 tgaagaaatt caccggcgaa gtttctctga ccggtcagcc gttcgttatg gaaccaagca
    34261 aaactgttgg tcagctgctg aaagagcata acgctgaagt gactggcttc atccgcttcg
    34321 aagtgggtga aggcatcgag aaagttgaga ctgactttgc agcagaagtt gctgcgatgt
    34381 ccaagcagtc ttaattatca aaaaggagcc gcctgagggc ggcttctttt tgtgcccatc
    34441 ttgtaaattc agctaaccct tgtggggctg cgctgaaaag cgacgtacaa tgtcgctagt
    34501 attaattcat ttcaatcgtt gacagtctca ggaaagaaac atggctacca atgcaaaacc
    34561 cgtctataaa cgcattctgc ttaagttgag tggcgaagct ctgcagggca ctgaaggctt
    34621 cggtattgat gcaagcatac tggatcgtat ggctcaggaa atcaaagaac tggttgaact
    34681 gggtattcag gttggtgtgg tgattggtgg gggtaacctg ttccgtggcg ctggtctggc
    34741 gaaagcgggt atgaaccgcg ttgtgggcga ccacatgggg atgctggcga ccgtaatgaa
    34801 cggcctggca atgcgtgatg cactgcaccg cgcctatgtg aacgctcgtc tgatgtccgc
    34861 tattccattg aatggcgtgt gcgacagcta cagctgggca gaagctatca gcctgttgcg
    34921 caacaaccgt gtggtgatcc tctccgccgg tacaggtaac ccgttcttta ccaccgactc
    34981 agcagcttgc ctgcgtggta tcgaaattga agccgatgtg gtgctgaaag caaccaaagt
    35041 tgacggcgtg tttaccgctg atccggcgaa agatccaacc gcaaccatgt acgagcaact
    35101 gacttacagc gaagtgctgg aaaaagagct gaaagtcatg gacctggcgg ccttcacgct
    35161 ggctcgtgac cataaattac cgattcgtgt tttcaatatg aacaaaccgg gtgcgctgcg
    35221 ccgtgtggta atgggtgaaa aagaagggac tttaatcacg gaataattcc cgtgatggat
    35281 aaataagggt aagattccgc gtaagtatcg cgggggcgta agtctggtta taaggcgtta
    35341 ttgttgcagg cagtttggtc acggccagcg cgcagcaacc ggagcgtaca aaagtacgtg
    35401 aggatggcga gcactgctcg gggccaaaat ggcaaataaa atagcctaat aatccagacg
    35461 attacccgta atatgtttaa tcagggctat acttagcaca cttccactgt gtgtgactgt
    35521 ctggtctgac tgagacaagt tttcaaggat tcgtaacgtg attagcgata tcagaaaaga
    35581 tgctgaagta cgcatggaca aatgcgtaga agcgttcaaa acccaaatca gcaaaatacg
    35641 cacgggtcgt gcttctccca gcctgctgga tggcattgtc gtagaatatt acggcacgcc
    35701 gacgccgctg cgtcagctgg caagcgtaac ggtagaagat tcccgtactc tgaaaatcaa
    35761 cgtgtttgat cgttcaatgt ctccggccgt tgaaaaagcg attatggcgt ccgatcttgg
    35821 cctgaacccg aactctgcgg gtagcgacat ccgtgttccg ctgccgccgc tgacggaaga
    35881 acgtcgtaaa gatctgacca aaatcgttcg tggtgaagca gaacaagcgc gtgttgcagt
    35941 acgtaacgtg cgtcgtgacg cgaacgacaa agtgaaagca ctgttgaaag ataaagagat
    36001 cagcgaagac gacgatcgcc gttctcagga cgatgtacag aaactgactg atgctgcaat
    36061 caagaaaatt gaagcggcgc tggcagacaa agaagcagaa ctgatgcagt tctgatttct
    36121 tgaacgacaa aaacgccgct cagtagatcc ttgcggatcg gctggcggcg ttttgctttt
    36181 tattctgtct caactctgga tgtttcatga agcaactcac cattctgggc tcgaccggct
    36241 cgattggttg cagcacgctg gacgtggtgc gccataatcc cgaacacttc cgcgtagttg
    36301 cgctggtggc aggcaaaaat gtcactcgca tggtagaaca gtgcctggaa ttctctcccc
    36361 gctatgccgt aatggacgat gaagcgagtg cgaaacttct taaaacgatg ctacagcaac
    36421 agggtagccg caccgaagtc ttaagtgggc aacaagccgc ttgcgatatg gcagcgcttg
    36481 aggatgttga tcaggtgatg gcagccattg ttggcgctgc tgggctgtta cctacgcttg
    36541 ctgcgatccg cgcgggtaaa accattttgc tggccaataa agaatcactg gttacctgcg
    36601 gacgtctgtt tatggacgcc gtaaagcaga gcaaagcgca attgttaccg gtcgatagcg
    36661 aacataacgc catttttcag agtttaccgc aacctatcca gcataatctg ggatacgctg
    36721 accttgagca aaatggcgtg gtgtccattt tacttaccgg gtctggtggc cctttccgtg
    36781 agacgccatt gcgcgatttg gcaacaatga cgccggatca agcctgccgt catccgaact
    36841 ggtcgatggg gcgtaaaatt tctgtcgatt cggctaccat gatgaacaaa ggtctggaat
    36901 acattgaagc gcgttggcta tttaacgcca gcgccagcca gatggaagtg ctgattcacc
    36961 cgcagtcagt gattcactca atggtgcgct atcaggacgg cagtgttctg gcgcagctgg
    37021 gggaaccgga tatgcgtacg ccaattgccc acaccatggc atggccgaat cgcgtgaact
    37081 ctggcgtgaa gccgctcgat ttttgcaaac taagtgcgtt gacatttgcc gcaccggatt
    37141 atgatcgtta tccatgcctg aaactggcga tggaggcgtt cgaacaaggt caggcagcga
    37201 cgacagcatt gaatgccgca aacgaaatca ccgttgctgc ttttcttgcg caacaaatcc
    37261 gctttacgga tatcgctgcg ttgaatttat cggtactgga aaaaatggat atgcgcgaac
    37321 cacaatgtgt ggacgatgtg ttatctgttg atgcgaacgc gcgtgaagtc gccagaaaag
    37381 aggtgatgcg tctcgcaagc tgaggataat ccggctacag agagtctcgc tatttgttag
    37441 cgtagggctt cagtgatata gtctgcgcca tctgatcgta agtagttggc tttataaggt
    37501 caggtatgcc gtggttttgc acggcttttt ttgtataggc ttcagtattc ctgagtaccg
    37561 taaaccctgt cagggaataa aaaacgcgtg atgttgtctg ctactcaacc acttagcgaa
    37621 aaattgccag cgcatggctg ccgtcatgtt gcgatcatta tggacggcaa tggtcgctgg
    37681 gcaaaaaagc aagggaagat tcgtgccttt gggcataaag ccggggcaaa atccgtccgc
    37741 cgggctgtct cttttgcggc caacaacggt attgaggcgt taacgctgta tgcctttagt
    37801 agtgaaaact ggaaccgacc agcgcaggaa gtcagtgcgt taatggaact gtttgtgtgg
    37861 gcgctcgata gcgaagtaaa aagtctgcac cgacataacg tgcgtctgcg tattattggc
    37921 gataccagtc gctttaactc gcgtttgcaa gaatgtattc gtaaatctga agcgctaaca
    37981 gccgggaata ccggtctgac gctgaatatt gcggcgaact acggtggacg ttgggatata
    38041 gtccagggag tcaggcaact ggctgaaaag gtgcagcaag gaaacctgca accagatcag
    38101 atagatgaag agatgctaaa ccagcatgtc tgtatgcatg aactggcccc tgtagattta
    38161 gtaattagga ctggggggga gcatcgcatt agtaactttt tgctttggca aattgcctat
    38221 gccgaacttt actttataga tgttctctgg cccgatttcg atgaacaaga ctttgaaggg
    38281 gcgttaaatg cctttgctaa tcgagagcgt cgtttcggcg gcaccgagcc cggtgatgaa
    38341 acagcctgat ggggggcgct tttgctgaag tatcgcctga tatctgcttt tgtgttaata
    38401 cccgtcgtca tcgcggcgtt gtttctgttg ccgccggtgg ggttcgccat tgtaacgctg
    38461 gtggtctgca tgctggcagc gtgggaatgg ggacagctta gcggttttac cactcgttcg
    38521 cagcgagtat ggttggcggt gttatgcggg ttattgttgg cgctgatgct ttttctgttg
    38581 ccggaatatc accgaaatat tcatcaaccg ctggttgaaa tctcactttg ggcttcgctg
    38641 ggttggtgga ttgtctcgct attgctggtg ctgttttacc caggttccgc agcaatctgg
    38701 cgtaactcta aaacattgcg ccttattttt ggcgtgctaa ccattgttcc cttcttctgg
    38761 ggcatgctgg cgttacgggc ctggcactat gacgagaatc attacagtgg cgcaatatgg
    38821 ctgctctatg tcatgatcct ggtatggggc gctgactccg gcgcatatat gtttggcaaa
    38881 ttgtttggta aacataagct ggcaccgaag gtttctccgg gtaaaacctg gcaaggcttt
    38941 ataggtggac tcgctactgc agcggtaatc tcatggggtt atggcatgtg ggcgaatctc
    39001 gacgtcgctc ccgtcacctt actcatttgc tctattgtcg cagcgttagc ctcagtgctc
    39061 ggcgatctga ccgagagtat gtttaagcgt gaagcaggaa ttaaggacag cggtcattta
    39121 attccaggac acggtggtat tttagatcgt attgatagcc tgacggctgc ggtaccggtc
    39181 tttgcttgct tgttgttact ggtattcagg acgctttaac ggaaggtaat atgctgagtt
    39241 ttctctggga tttggcttcg ttcatcgttg cactgggtgt acttatcact gtgcatgaat
    39301 ttggtcattt ctgggttgcc cggcgttgtg gtgttcgcgt tgagcgtttc tcaatagggt
    39361 ttggtaaggc gctctggcgg cgaactgata agctcggcac cgaatatgtt atcgccctga
    39421 tcccgctggg cggttatgtc aaaatgctgg atgagcgcgc agaaccggtc gttccggaac
    39481 tccgccacca tgccttcaat aataaatctg ttggccaacg agcggcgatt attgccgcag
    39541 gtccggttgc aaacttcatt tttgctatct ttgcctactg gctggttttt attattggtg
    39601 tgcctggcgt acgtccggtg gttggtgaaa tagcagccaa ttcgatagct gcggaagcac
    39661 aaattgcacc aggtacggaa ctaaaagccg tagatggtat cgaaacgcct gattgggatg
    39721 ccgtgcgttt gcagttggtc gataaaattg gcgatgaaag caccaccatt acagtagcgc
    39781 catttggcag cgaccaacgg cgggatgtaa agctcgattt acgtcactgg gcgtttgagc
    39841 ctgataaaga agatccggta tcttcgctgg ggattcgtcc tcgtgggctg caaattgaac
    39901 ctgtactgga aaatgtgcag ccaaactcgg cggcaagcaa ggcaggtttg caagcaggcg
    39961 acaggatcgt taaagtcgat ggtcagccct taacgcagtg ggtgaccttt gtgatgcttg
    40021 tccgggataa cccggggaaa tccttagcgt tagaaatcga aaggcaggga agtctcttgt
    40081 ctttgacatt aatcccggag agtaaaccgg gtaatggtaa agcgattggt tttgtcggta
    40141 ttgagccgaa agtcattcct ttgccagatg agtataaagt tgtacgccag tatgggccgt
    40201 tcaacgccat cgtcgaagcc acggacaaaa cgtggcagct gatgaagctg acggtcagta
    40261 tgctgggaaa attgatcacc ggtgatgtga aactgaacaa cctcagtggg ccgatctcta
    40321 tcgccaaggg ggctgggatg acagcggaac tcggggtagt ttattacctg ccgtttcttg
    40381 cgcttattag cgtgaactta gggataatta acctgtttcc gttgcccgta cttgacgggg
    40441 cgcatctgct gttccttgcg atcgaaaaga tcaagggcgg accggtatcc gagcgggttc
    40501 aagacttttg ttatcgcatt ggctcgattc tgctggtgct gttaatgggg cttgcacttt
    40561 tcaatgattt ctctcggtta tgagagttag ttaggaagaa cgcataataa cgatggcgat
    40621 gaaaaagttg ctcatagcgt cgctgctgtt tagcagcgcc accgtatacg gtgctgaagg
    40681 gttcgtagtg aaagatattc atttcgaagg ccttcagcgt gtcgccgttg gtgcggccct
    40741 cctcagtatg ccggtgcgta caggcgacac ggttaatgat gaagatatca gtaataccat
    40801 tcgcgctctg tttgctaccg gcaactttga ggatgttcgc gtccttcgtg atggtgatac
    40861 ccttctggtt caggtaaaag aacgtccgac cattgccagc attactttct ccggtaacaa
    40921 atcggtgaaa gatgacatgc tgaagcaaaa cctcgaggct tctggtgtgc gtgtgggcga
    40981 atccctcgat cgcaccacca ttgccgatat cgagaaaggt ctggaagact tctactacag
    41041 cgtcggtaaa tatagcgcca gcgtaaaagc tgtcgtgacc ccgctgccgc gcaaccgtgt
    41101 tgacctaaaa ctggtgttcc aggaaggtgt gtcagctgaa atccagcaaa ttaacattgt
    41161 tggtaaccat gctttcacca ccgacgaact gatctctcat ttccaactgc gtgacgaagt
    41221 gccgtggtgg aacgtggtag gcgatcgtaa ataccagaaa cagaaactgg cgggcgacct
    41281 tgaaaccctg cgcagctact atctggatcg cggttatgcc cgtttcaaca tcgactctac
    41341 ccaggtcagt ctgacgccag ataaaaaagg tatttacgtc acggtgaaca ttaccgaagg
    41401 cgatcagtac aagctttctg gcgttgaagt gagcggcaac cttgccgggc actccgctga
    41461 aattgagcag ctgactaaga tcgagccggg cgagctgtat aacggcacca aagtgaccaa
    41521 gatggaagat gacatcaaaa agcttctcgg tcgctatggt tatgcctatc cgcgcgtaca
    41581 gtcgatgcct gaaattaacg atgccgacaa aaccgttaaa ttacgcgtga acgttgatgc
    41641 gggtaaccgt ttctacgtgc gtaagatccg ttttgaaggt aacgatacct cgaaagatgc
    41701 cgtcctgcgt cgcgaaatgc gtcagatgga aggtgcatgg ctgggaagcg atctggtcga
    41761 tcagggtaag gagcgtctga atcgtctggg cttctttgaa actgtcgata ccgataccca
    41821 acgtgttccg ggtagcccgg accaagtaga tgtagtctac aaggtgaaag aacgtaacac
    41881 cggtagcttc aacttcggga ttggttacgg tactgaaagt ggcgtgagct tccaggctgg
    41941 cgtgcaacag gataactggt taggtacagg ttatgctgtt ggtatcaacg ggaccaaaaa
    42001 cgattaccag acctatgctg aattgtcggt aaccaacccg tacttcactg tagatggtgt
    42061 aagcctcggt ggtcgtctct tctataatga cttccaggca gatgacgccg acctgtccga
    42121 ctataccaac aagagttatg gtacagacgt gacgttgggc ttcccgatca acgaatataa
    42181 ctcgctgcgt gcaggtctgg gttatgtaca taactccctg tccaacatgc agcctcaggt
    42241 tgcgatgtgg cgttatctgt actctatggg tgaacatccg agcacctctg atcaggataa
    42301 cagcttcaaa acggacgact tcacgttcaa ctatggttgg acctataaca agcttgaccg
    42361 tggttacttc ccgacagatg gttcacgtgt caacctgacc ggtaaagtga ccattcctgg
    42421 atcggataac gaatactaca aagtgacgtt agacacggcg acttatgtgc cgatcgatga
    42481 cgatcacaaa tgggttgttc tggggcgtac ccgctggggt tatggtgatg gtttaggcgg
    42541 caaagagatg ccgttctacg agaacttcta tgccggtggt tccagcaccg tccgtggctt
    42601 ccagtccaat accattggtc cgaaagcagt ttacttcccg catcaggcca gtaattatga
    42661 tccggactat gattacgaat gtgcgactca ggacggcgcg aaagacctgt gtaaatcgga
    42721 tgatgctgta ggcggtaacg ccatggcggt tgccagcctc gagttcatca ccccgacgcc
    42781 gtttattagc gataagtatg ctaactcggt tcgtacttcc ttcttctggg atatgggtac
    42841 cgtttgggat acaaactggg attccagcca atattctgga tatccggact atagtgatcc
    42901 aagcaatatc cgtatgtctg cgggtatcgc attacaatgg atgtccccat tggggccgtt
    42961 ggtgttctcc tacgcccagc cgttcaaaaa gtacgatgga gacaaggcag aacagttcca
    43021 gtttaacatc ggtaaaacct ggtaagtgtt ctccacaaag gaatgtagtg gtagtgtagc
    43081 gatgacttta ggcgatcaat ataagatcgc cgggccacgc aaagaactgc accctccggt
    43141 gcaaatggga tggtaaggag tttattgtga aaaagtggtt attagcggca ggtctcggtt
    43201 tagcactggc aacttctgct caggcggctg acaaaattgc aatcgtcaat atgggcagcc
    43261 tgttccagca ggtagcgcag aaaaccggtg tttctaacac gctggaaaat gagttcaaag
    43321 gccgtgccag cgaactgcag cgtatggaaa ccgatctgca ggctaaaatg aaaaagctgc
    43381 agtccatgaa agcgggcagc gatcgcacta agctggaaaa agacgtgatg gctcagcgcc
    43441 agacttttgc tcagaaagcg caggcttttg agcaggatcg cgcacgtcgt tccaacgaag
    43501 aacgcggcaa actggttact cgtatccaga ctgctgtgaa atccgttgcc aacagccagg
    43561 atatcgatct ggttgttgat gcaaacgccg ttgcttacaa cagcagcgat gtaaaagaca
    43621 tcactgccga cgtactgaaa caggttaaat aagtaatgcc ttcaattcga ctggctgatt
    43681 tagcgcagca gttggatgca gaactacacg gtgatggcga tatcgtcatc accggcgttg
    43741 cgtccatgca atctgcacaa acaggtcaca ttacgttcat ggttaaccca aaataccgtg
    43801 agcatttagg cttgtgccag gcgtccgcgg ttgtcatgac ccaggacgat cttcctttcg
    43861 cgaaaagtgc cgcgctggta gtgaagaatc cctacctgac ttacgcgcgc atggcgcaaa
    43921 ttttagatac cacgccgcag cccgcgcaga acattgcacc cagtgcggtg atcgacgcga
    43981 cggcgaagct ggggaacaat gtatcgattg gcgctaacgc ggtgattgaa tccggcgttg
    44041 aactgggcga taacgtgatt atcggtgccg gttgcttcgt aggtaaaaac agcaaaatcg
    44101 gtgcaggttc gcgtctctgg gcgaacgtaa ccatttacca tgagatccag atcggtcaga
    44161 attgcctgat ccagtccgga acagtggtag gcgcagacgg ctttggttat gccaacgatc
    44221 gtggtaactg ggttaagatc ccacagattg gtcgcgtaat tattggcgat cgcgtggaga
    44281 tcggtgcctg cactaccatc gatcgcggcg cactggatga cactgttatt ggcaatggcg
    44341 tgatcattga taaccagtgc cagattgcac ataacgtcgt gattggcgac aatacggcgg
    44401 ttgccggtgg cgtcattatg gcgggcagcc tgaaaattgg tcgttactgc atgatcggcg
    44461 gagccagcgt aatcaacggg catatggaaa tatgcgacaa agtgacggtt acgggcatgg
    44521 gtatggtgat gcgtcccatc actgaaccag gcgtctattc ctcaggcatt ccgctgcaac
    44581 ccaacaaagt ctggcgcaaa accgctgcac tggtgatgaa cattgatgac atgagcaagc
    44641 gtctgaaatc gcttgagcgc aaggttaatc aacaagacta acgttccatc ttttgttcgc
    44701 caaactttac ggcctgtctc attcttacga ttgcggcagg ccgtgttatt attgtcgttt
    44761 cttatatttt gacaggaaga gtatcttgac tactaacact catactctgc agattgaaga
    44821 gattttagaa cttctgccgc accgtttccc gttcttactg gtggatcgcg tgctggattt
    44881 tgaagaaggt cgttttctgc gcgcagtaaa aaatgtctct gtcaatgagc cattcttcca
    44941 gggccatttc cctggaaaac cgattttccc gggtgtgctg attctggaag caatggcaca
    45001 ggcaacaggt attctggcgt ttaaaagcgt aggaaaactg gaaccgggtg agctgtacta
    45061 cttcgctggt attgacgaag cgcgcttcaa gcgcccggtc gtgcctggcg atcaaatgat
    45121 catggaagtc actttcgaaa aaacgcgccg cggcctgacc cgttttaaag gggttgctct
    45181 ggtcgatggt aaagtagttt gcgaagcaac gatgatgtgt gctcgtagcc gggaggcctg
    45241 atacgtgatt gataaatccg cctttgtgca tccaaccgcc attgtggaag agggcgcgtc
    45301 aattggcgcg aacgcacaca ttggtccttt ttgtatcgtt ggaccccatg tcggaattgg
    45361 tgagggtacc gtactgaaat ctcacgttgt cgtgaatggt catactaaaa ttggccgcga
    45421 taatgagatt tatcagttcg cctccatcgg cgaagttaac caggatctga aatatgctgg
    45481 cgaaccgacc cgtgtggaaa tcggcgatcg taaccgcatt cgcgaaagcg tcaccattca
    45541 tcgtggcaca gtccagggcg gtggattgac gaaggtgggc agcgacaact tactgatgat
    45601 caacgcgcac attgcgcacg attgtacggt aggtaaccgc tgtattctcg ccaacaacgc
    45661 aacgctggcg ggtcacgtat cggttgacga cttcgcgatc atcggcggca tgaccgcagt
    45721 ccatcagttc tgcatcattg gtgcgcacgt gatggttggc ggctgctccg gtgtggcgca
    45781 ggacgtccct ccttatgtca ttgcgcaggg taaccacgca acgccgttcg gtgtcaatat
    45841 cgaagggctg aagcgccgcg gattcagccg tgaggcgatt accgctatcc gcaatgcgta
    45901 taagctgatt tatcgtagcg gtaaaacgct cgatgaagtg aaaccggaaa ttgctgaact
    45961 ggcggaaaca tatccggaag tgaaagcctt taccgatttc ttttcacgct caacgcgcgg
    46021 tctgattcgt taatgactga acagcgtcca ttaacgattg ccctggtcgc cggagaaacc
    46081 tccggcgata tcctaggggc cggtttaatc cgcgctctga aagaacgtgt gcccaacgcc
    46141 cgctttgttg gtgttgccgg gccacgaatg caggctgaag gctgcgaagc ctggtacgaa
    46201 atggaagaac tggcggtgat gggcattgtt gaagtgctcg gtcgtctgcg tcgcttactg
    46261 catattcgtg ccgatctgac aaagcgtttt ggcgaactga agccagatgt ttttgttggt
    46321 attgatgcgc ctgacttcaa tattactctt gaaggtaacc tcaaaaagca gggtatcaaa
    46381 accattcatt acgtcagtcc gtcagtctgg gcgtggcgac agaaacgtgt tttcaaaata
    46441 ggcagagcca ccgatctggt gctcgcattt ctgcctttcg aaaaagcgtt ttatgacaaa
    46501 tacaacgtac cgtgccgctt tatcggtcat accatggctg atgccatgcc attagatcca
    46561 gataaaaatg ccgcccgtga tgtgctgggg atccctcacg atgcccactg cctggcgttg
    46621 ctaccgggga gccgtggtgc agaagttgaa atgcttagtg ccgatttcct gaaaacggcc
    46681 cagcttttgc gccagacata tccggatctc gaaatcgtgg tgccactggt gaatgccaaa
    46741 cgccgcgagc agtttgaacg catcaaagct gaagtcgcgc cagacttttc agttcatttg
    46801 ctggatggga tgggccgtga ggcgatggtc gccagcgatg cggcgctact ggcgtcgggt
    46861 acggcagccc tggagtgtat gctggtgaaa tgcccgatgg tggtgggata tcgcatgaag
    46921 ccttttacct tctggttggc gaagcggctg gtgaaaactg attatgtctc gctgccaaat
    46981 ctgctggcgg gcagagagtt agtcaaagag ttattgcagg aagagtgtga gccgcaaaaa
    47041 ctggctgcgg cgctgttacc gctgttggcg aacgggaaaa tcagccacgc gatgcacgat
    47101 accttccgtg aactgcatca gcagatccgt tgcaatgccg atgagcaggc ggcacaagcc
    47161 gttctggagt tagcacaatg atcgaatttg tttatccgca cacgcagctg gttgcgggtg
    47221 tggatgaagt cggacgcggg ccgttagttg gcgcggtcgt caccgctgcg gtgatccttg
    47281 acccggcgcg cccgattgcc gggctgaatg attccaaaaa gctgagcgaa aaacgccgtc
    47341 tggcgctctg tgaagagatc aaagagaaag cgttgagctg gagtctgggc cgcgcggaac
    47401 cccacgaaat cgacgagctg aacattcttc atgcgaccat gctggcgatg cagcgtgccg
    47461 tcgctgggct gcatattgcg ccggaatatg tgttgattga tggtaaccgc tgcccgaaat
    47521 taccgatgcc tgcgatggtt gtggtgaaag gcgatagccg cgtaccggaa atcagtgccg
    47581 cgtctatcct ggcgaaagtg acgcgtgacg ccgaaatggc ggcgctggat attgttttcc
    47641 cgcaatatgg ttttgcccaa cacaaagggt acccaaccgc ttttcatctg gaaaaactgg
    47701 ctgaacacgg cgcgaccgaa caccatcggc gcagctttgg gcctgtcaaa cgcgcactgg
    47761 gacttgcgtc ctgattcttg tgtcgagatt aagtaaaccg gaatctgaag atgtctgaac
    47821 cacgtttcgt acacctgcgg gtgcacagcg actactcgat gatcgatggc ctggccaaaa
    47881 ctgcaccgtt ggtaaaaaag gcggcggcgt tgggtatgcc agcactggcg atcaccgatt
    47941 tcaccaacct ttgtggtctg gtgaagttct acggagcggg acatggcgca gggattaagc
    48001 ctatcgtcgg ggcagatttt aacgtccagt gcgacctgct gggtgatgag ttaacccacc
    48061 tgacggtact ggcggcgaac aataccggct atcagaatct gacgttgctg atctcaaaag
    48121 cgtatcagcg cgggtacggt gccgctgggc cgatcatcga tcgcgactgg cttatcgaat
    48181 taaatgaagg gttgatcctt ctttccggcg ggcgcatggg cgacgtcgga cgcagtcttt
    48241 tgcgtggtaa cagcgcgctg gtagatgagt gtgtcgcgtt ttatgaagaa cacttcccgg
    48301 atcgctattt tctcgagctg atccgcaccg gcaggccgga tgaagaaagc tatctgcacg
    48361 cggcggtgga actggcggaa gcgcgcggtt tgcccgtcgt ggcgactaac gatgtgcgct
    48421 ttatcgacag cagcgacttt gacgcacacg aaatccgcgt cgcgatccac gacggcttta
    48481 ccctcgacga tcctaaacgc ccgcgtaact attcgccgca gcaatatatg cgtagcgaag
    48541 aggagatgtg tgagctgttt gccgacatcc ccgaagccct tgccaacacc gttgagatcg
    48601 ccaaacgctg taacgtaact gtgcgtcttg gtgaatactt cctgccgcag ttcccgaccg
    48661 gggacatgag caccgaagat tatctggtca agcgtgcaaa agagggcctg gaagagcgtc
    48721 tggccttttt attccctgac gaggaagaac gtgttaagcg ccgcccggaa tatgacgaac
    48781 gtctggagac tgaacttcag gttatcaacc agatgggctt cccgggctac ttcctcatcg
    48841 ttatggaatt tatccagtgg tcgaaagata acggcgtacc ggtagggcca ggccgtggct
    48901 ccggtgcggg ttcactggtg gcctacgcgc tgaaaatcac cgacctcgat ccgctggaat
    48961 ttgacctgct gttcgaacgt ttccttaacc cggaacgtgt ctccatgcct gacttcgacg
    49021 ttgacttctg tatggagaaa cgcgatcagg ttatcgagca cgtagcggac atgtacggtc
    49081 gtgatgcggt atcgcagatc atcaccttcg gtacaatggc ggcgaaagcg gtgatccgcg
    49141 acgtaggccg cgtgctgggg catccgtacg gctttgtcga tcgtatctcg aaactgatcc
    49201 cgcccgatcc ggggatgacg ctggcgaaag cgtttgaagc cgagccgcag ctgccggaaa
    49261 tctacgaagc ggatgaagaa gttaaggcgc tgatcgacat ggcgcgcaaa ctggaagggg
    49321 tcacccgtaa cgccggtaag cacgccggtg gggtggttat cgcgccgacc aaaattaccg
    49381 attttgcgcc gctttactgc gatgaagagg gcaaacatcc ggtcacccag tttgataaaa
    49441 gcgacgttga atacgccgga ctggtgaagt tcgacttcct tggtttgcgt acgctcacca
    49501 tcatcaactg ggcgctggag atgatcaaca agcggcgggc gaagaatggc gagccgccgc
    49561 tggatatcgc cgcgatcccg ctggatgaca agaaaagctt cgacatgctg caacgctcgg
    49621 aaaccacggc ggtattccag cttgaatcgc gcggcatgaa ggatctgatc aagcgtctgc
    49681 aacctgactg cttcgaagat atgatcgcac tggtggcgct gttccgccca ggtccgttgc
    49741 aatcagggat ggtggataac tttatcgacc gtaaacatgg tcgcgaagaa atctcctatc
    49801 cggacgtaca gtggcagcat gaaagcctga aaccggtact ggagccaacc tacggcatca
    49861 tcctgtatca ggaacaggtc atgcagattg cgcaggtgct ttctggttat accctcggtg
    49921 gcgcggatat gctgcgtcgt gcgatgggta agaaaaagcc ggaagagatg gctaagcagc
    49981 gttctgtatt tgctgaaggt gcagaaaaga acggagtcaa cgccgaactg gcgatgaaaa
    50041 tcttcgacct ggtggagaaa ttcgcgggtt acggatttaa caaatcgcac tctgcggcct
    50101 atgctttggt gtcatatcaa acgttatggc tgaaagcgca ctatccggcg gagtttatgg
    50161 cggcggtaat gaccgccgat atggacaaca ccgagaaggt ggtgggcctg gtggatgagt
    50221 gctggcggat ggggctgaaa atcctgccac cagatataaa ctccggtctt taccatttcc
    50281 acgtcaacga cgacggcgaa atcgtgtatg gtattggcgc catcaaaggg gtaggtgaag
    50341 gtccgattga ggccatcatc gaagcccgta ataaaggcgg ctacttccgc gaactgtttg
    50401 atctctgcgc ccgtaccgac accaaaaagt taaaccggcg ggtgctggaa aaactgatca
    50461 tgtccggggc gtttgaccgt cttgggccac accgcgcggc gctgatgaac tcgctgggtg
    50521 atgcgttaaa agcggcagat caacacgcga aagcggaagc tatcggtcag gccgatatgt
    50581 tcggcgtgct ggccgaagag ccggaacaaa ttgaacaatc ctacgccagc tgccaaccgt
    50641 ggccggagca ggtggtgtta gatggggaac gtgaaacgtt aggtctgtac cttacgggac
    50701 accctatcaa ccagtattta aaagagattg agcgttatgt cggaggcgta aggctgaaag
    50761 acatgcaccc gacagaacgt ggtaaagtca tcacggctgc ggggctcgtt gttgccgcgc
    50821 gggttatggt caccaagcgc ggcaatcgta tcggtatctg cacgctggat gaccgttccg
    50881 ggcggctgga agtgatgttg tttactgacg ccctggataa ataccagcaa ttgctggaaa
    50941 aagaccgcat acttatcgtc agcggacagg tcagctttga tgacttcagc ggtgggctta
    51001 aaatgaccgc tcgcgaagtg atggatattg acgaagcccg ggaaaaatat gctagcgggc
    51061 ttgctatctc gctgacggac aggcaaattg atgaccagct tttaaaccga ctccgtcagt
    51121 ctctggaacc ccaccgctct gggacaattc cagtacatct ctactatcag agggcggatg
    51181 cacgcgcgcg gttgcgtttt ggcgcgacgt ggcgtgtctc tccgagcgat cgtttattaa
    51241 acgatctccg tggcctcatt ggttcggagc aggtggaact ggagtttgac taatacagga
    51301 atactatgag tctgaatttc cttgattttg aacagccgat tgcagagctg gaagcgaaaa
    51361 tcgattctct gactgcggtt agccgtcagg atgagaaact ggatattaac atcgatgaag
    51421 aagtgcatcg tctgcgtgaa aaaagcgtag aactgacacg taaaatcttc gccgatctcg
    51481 gtgcatggca gattgcgcaa ctggcacgcc atccacagcg tccttatacc ctggattacg
    51541 ttcgcctggc atttgatgaa tttgacgaac tggctggcga ccgcgcgtat gcagacgata
    51601 aagctatcgt cggtggtatc gcccgtcttg acggtcgtcc ggtgatgatc attggtcatc
    51661 aaaaaggtcg tgaaaccaaa gaaaaaattc gccgtaactt tggtatgcca gcgccagaag
    51721 gttaccgcaa agcactgcgt ctgatgcaaa tggctgaacg ctttaagatg cctatcatca
    51781 cctttatcga caccccgggg gcttatcctg gcgtgggcgc agaagagcgt ggtcagtctg
    51841 aagccattgc acgcaacctg cgtgaaatgt ctcgcctcgg cgtaccggta gtttgtacgg
    51901 ttatcggtga aggtggttct ggcggtgcgc tggcgattgg cgtgggcgat aaagtgaata
    51961 tgctgcaata cagctcctat tccgttatct cgccggaagg ttgtgcgtcc attctgtgga
    52021 agagcgccga caaagcgccg ctggcggctg aagcgatggg tatcatcgct ccgcgtctga
    52081 aagagctgaa actgatcgac tccatcatcc cggaaccgct gggcggcgct caccgtaacc
    52141 cggaagcgat ggcggcatcg ttgaaagcgc aactgctggc ggatctggcc gatctcgatg
    52201 tgttaagcac tgaagattta aaaaatcgtc gttatcagcg cctgatgagc tacggttacg
    52261 cgtaattcgc aaaagttctg aaaaagggtc acttcggtgg ccctttttta tcgccacggt
    52321 ttgagcaggc tatgattaag gaaggatttt ccaggaggaa cacatgaaca tcattgccat
    52381 tatgggaccg catggcgtct tttataaaga tgagcccatc aaagaactgg agtcggcgct
    52441 ggtggcgcaa ggctttcaga ttatctggcc acaaaacagt gttgatttgc tgaaatttat
    52501 cgaacataac cctcgaattt gcggcgtgat ttttgactgg gatgagtaca gtctcgattt
    52561 atgcagcgat atcaatcaac ttaatgaata tctcccgctt tatgccttca tcaacaccca
    52621 ctcgacgatg gatgtcagcg tgcaggatat gcggatggcg ctctggtttt ttgaatatgc
    52681 gctggggcag gcggaagata tcgccattcg tatgcgtcag tacaccaacg aatatcttga
    52741 taacattacg ccgccgttca cgaaagcctt gtttacctac gttaaagagc ggaagtacac
    52801 cttttgtacg ccggggcata tgggcggcac cgcatatcaa aaaagcccgg ttggctgcct
    52861 gttttatgat tttttcggcg ggaataccct caaggctgat gtctctattt cggtcaccga
    52921 gcttggttcg ttgctcgacc acaccgggcc acacctggaa gcggaagagt acatcgcgcg
    52981 gacttttggc gcggaacaga gttatatcgt taccaacgga acatcgacgt cgaacaaaat
    53041 tgtgggtatg tacgccgcgc catccggcag tacgctgttg atcgaccgca attgtcataa
    53101 atcgctggcg catctgttga tgatgaacga tgtagtgcca gtctggctga aaccgacgcg
    53161 taatgcgttg gggattcttg gtgggatccc gcaccgtgaa tttactcgcg acagcatcga
    53221 agagaaagtc gctgccacca cgcaggcaca atggccggtt catgcggtga ttaccaactc
    53281 cacctatgat ggcttgctct acaacaccga ctggatcaaa cagacgctgg atgtcccgtc
    53341 gatccacttc gattccgcct gggtgccgta cacccatttt catccgatct accaggggaa
    53401 aagtgatctt cgaaacgcaa tcgacccaca aaatgctggc ggcgttatcg caggcttcgc
    53461 tgatccacat taaaggcgag tatgacgaag aggcgtttaa cgaagccttt atgatgcata
    53521 ccaccacctc gcccagttat cccattgttg cttcggttga gacggcggcg gcgatgctgc
    53581 gtggtaatcc gggcaaacgg ctgattaacc gttcggtgga gcgggcgctg cattttcgca
    53641 aagaggtcca gcggttgcgg gaagagtctg acggttggtt tttcgatatc tggcaaccgc
    53701 cgcaggtgga tgaagccgaa tgctggcccg ttgcgccagg cgaacagtgg cacggcttta
    53761 acgatgcgga tgccgatcat atgtttctcg atccggttaa agtcactatt ttgataccgg
    53821 ggatggacga acagggcaat atgagcgagg aggggatccc ggcggcgctg gtggcaaaat
    53881 tcctcgacga acgtgggatc gtagtagaga aaaccggccc ttataacctg ctgtttctct
    53941 ttagtattgg tatcgataaa accaaagcaa tgggattatt gcgtgggttg acggaattta
    54001 aacgctctta cgatctcaac ctgcggatca aaaatatgct acccgatctc tatgctgaag
    54061 atcccgattt ctaccgcaat atgcgtattc aggatctggc gcaagggatc cataagctga
    54121 ttcgtaaaca cgatcttccc ggtttgatgt tgtgggcatt cgatactttg ccggaaatta
    54181 tcatgacgcc acatcaggca tggcagagac agattaaagg tgaagtagaa accattgcgc
    54241 tggaacaact ggtcggtaga gtatcggcaa atatgagcct gccttatcca ccgggcgtac
    54301 cgctgttgat gccaggagaa atgctgacca aagagagccg cacggtactc gattttctac
    54361 tgatgctttg ttccgtaggg caacattacc ccggttttga aacggatatt cacggcgcga
    54421 aacaggacga agacggcgtt taccgcgtac gagtcctaaa aatggcggga taacttgcca
    54481 gagcggctta cgggcgagta acgtgctgtt aacaaataaa ggagacgtta tgctgggttt
    54541 aaaacaggtt caccatattg cgattattgc gacggattat gcggtgagca aagctttcta
    54601 ctgcgatatt cttggtttca cgctgcaaag cgaagtctat cgcgaagcgc gcgactcgtg
    54661 gaaaggggat ttggcgctta atgggcaata tgtgattgag cttttctctt ttccgttccc
    54721 gccggagcgc cccagccgac cggaagcttg cggcctgcgt catctggctt ttagcgttga
    54781 tgacatcgat gcggcagtgg cgcaccttga aagccataac gtgaagtgtg aagccatccg
    54841 tgtcgatcca tacacgcaaa aacgcttcac cttctttaac gatccggacg ggctgccgtt
    54901 ggaactgtat gagcagtaag gcttgtcatc gccgcatttg cccggtaacg tgccgggcat
    54961 tgctactgta aaatcgcacc atcatgacac tcacgctcaa tagacaactt ctcacctcac
    55021 gccagatttt ggtcgccttt agcggcgggc ttgactccac cgttctgctg catcagttgg
    55081 tgcagtggcg gacggaaaat ccgggcgtca ctctgcgcgc tattcatgtg catcacggtt
    55141 taagtgccaa tgccgatgcc tgggttacgc attgcgaaaa cgtctgccaa cagtggcagg
    55201 tgccgctggt ggtcgaacgc gtacaacttg cgcaagaggg gctggggatt gaggcccagg
    55261 cgcggcaggc gcgttatcag gcatttgccc gtaccctatt gcccggcgaa gtgctggtca
    55321 ccgcgcaaca tctcgacgat caatgtgaaa cctttctgct ggcgctaaaa cgcggtagcg
    55381 gccctgccgg gctttcggct atggcggaag tttcggagtt tgccggaaca cggcttatcc
    55441 gcccgttgct tgcccgcacg cggggggaac tggcgcagtg ggcattggcg catggtttac
    55501 gctggattga agacgaaagt aatcaggacg actcatacga tcgtaacttt ctgcgcctgc
    55561 gcgtagtgcc gttattgcag cagcgttggc cgcattttgc ggaagcaacg gcccgcagcg
    55621 ccgcactttg tgctgaacaa gagagtctgt tggatgaact gctggcggat gatttagcac
    55681 actgccaaac gtcgcagggg acgctgcaga ttgcgccaat gctggcgatg agtgatgccc
    55741 gccgcgcggc gattatccgt cgctggctgg cagggcagaa tgcaccaatg ccttcccgcg
    55801 aagcgctggt gcggatctgg caggaagtgg cgctggcgcg ggaagatgcc tccccctgtt
    55861 tacgcttggg cgcgtttgaa atccgccgct atcagtcgca actgtggtgg attaaatccg
    55921 tcaccgggca aagtgaaacc attgtgccgt ggcagacgtg gctacaaccg ctggaattac
    55981 cggcggggct gggaagcgta cagcttactg cgggaggcga tattcgccct ccgcgtgcag
    56041 acgaagcggt cagcgtgcgt ttcaaatcgg caggattgct gcatattgtc gggcgcaacg
    56101 gcggacgtaa gctgaagaaa atctggcaag agttaggcgt gccgccgtgg ctacgtgaca
    56161 ccacgccact gctgttttat ggcgaaacgc tgattgcggc ggcaggggta tttgtgacgc
    56221 aagaaggtgt ggctgaaggt gagaatggcg taagttttgt ctggcagaaa acgcttagtt
    56281 aagtgaaagc cggataagac gcatcaaacg tcgcatccgg cgaaagtcaa tcaggactcg
    56341 ctcaccacca ccgtaccgat ttccgggtgg ctaaagctgg taattttatc cagacgtagc
    56401 tcacgggttt cgccagcggc ctcgacgacc agatactcca catttttgcg ggagactaaa
    56461 tcgctggctt ttgcctgcaa tttttcgcca tctttcagct caagtgtcag cattaaatga
    56521 tgctggcagg cgagctcaag attatcgtaa tcatcacaat tgattggttg atacgtatca
    56581 ttcattaaca taatcgctca ccagtaagtt tgccgcagcg tatgctgctt tttccctgac
    56641 agcctcagaa agggcgtcgt cggcagccat ttcattcagc actttcaaaa cgcagcccag
    56701 cgcgtccgga acgtatccta agtctccgct ggcgatttcc gcgtaccgct tgcgtattaa
    56761 ctcacaatat ttttccacat gccctcctgt cagcacactg acttaaccgt ggatgcaagt
    56821 ctaagcctac gaagataaac tctgtttcgc aaggtgacta taccacactc atttctgcaa
    56881 tatcagcgcc gcaactgcac gtattccgtt acaatggcct cctgattcga aaggagtttt
    56941 cttatggcgc ttaaagcgac aatttataaa gcgacggtta atgtggccga tctcgaccgc
    57001 aaccagtttc tcgatgcctc tctgacgctg gcgcgccacc cttcagaaac ccaggagcgt
    57061 atgatgctgc gcctgctggc gtggctgaaa tatgctgatg aacgtctgca atttacccgt
    57121 ggtttgtgtg ccgatgatga gccggaagcg tggctgcgta acgatcacct gggcattgat
    57181 ttgtggattg agctggggct gccggatgag cggcggatta agaaagcctg cacccaggcc
    57241 gcagaagtgg cgctgtttac ctataatagt cgggcggcgc aaatctggtg gcagcaaaat
    57301 cagagcaaat gtgtgcagtt tgccaatctt tccgtctggt atctggacga tgaacaactg
    57361 gcgaaagtaa gcgcctttgc cgatcgtacc atgacgctgc aggcaacgat tcaggatggc
    57421 gtgatctggt tatcggacga taagaataat ctggaagtta acttaaccgc ctggcaacaa
    57481 ccttcatgat tgtgatttcc cgacatgttg ctattcccga tggtgagctt gagatcaccg
    57541 ccattcgtgc gcagggcgcg ggcgggcagc atgttaataa gacctcaacg gccattcatc
    57601 tgcgttttga cattcgggcg tccagcctgc cagagtatta caaagagcgt ctgctcgccg
    57661 ccagccatca tttgatcagc agtgatggcg tgattgtcat taaggcacag gaataccgca
    57721 gtcaggaact gaaccgcgaa gccgcgctag cccggctggt ggcagtgatt aaagatttaa
    57781 caacagaaca aaaagcccga cgacccacgc ggcccacccg tgcatcgaaa gagcgcaggc
    57841 tggcatcgaa agcacaaaaa tcaagcgcga aggcgatgcg cggcaaagta cgcagcggtc
    57901 gggaataaaa agaaggaata gatggtgaaa aaagcgatag tgacagcgat ggctgtaatc
    57961 agcctcttta ctctgatggg atgtaataac cgggccgaag tcgatacgct ttctccagca
    58021 caggctgccg aactgaaacc gatgccgcaa agttggcgcg gcgtgctgcc gtgtgctgat
    58081 tgtgaaggaa tcgaaacctc tctgttcctc gaaaaagacg gaacatgggt gatgaatgag
    58141 cgttatctcg gtgctcgtga agaaccttcc tccttcgctt cctacggtac atgggcgcga
    58201 accgctgaca agctggtatt aaccgacagc aaaggtgaaa agtcatatta tcgggcgaaa
    58261 ggcgatgcgc tggagatgct cgatcgtgaa ggcaatccga ttgaatcgca gttcaactat
    58321 acgctggaac cggcacaatc cagtttacct atgacgccga tgaccctgcg aggcatgtat
    58381 ttttatatgg ctgatgcggc gaccttcact gattgcgcga ccggaaaacg tttcatggta
    58441 gcgaataacg cagagctgga gcgtggctac ctggctgcgc gcggtcacag tgaaaaaccg
    58501 gtgttactgt cagtagaagg tcactttacg cttgaggcta atccggatac tggtgcgcca
    58561 accaaagtat tagcgcccga tacggcgggt aaattttacc cgaataagga ttgcagtagt
    58621 ttggggcagt aaacctgctt aaggcagaaa caaacgcaaa acaggccaga aggatatatt
    58681 tcaacatttt gaatttgcac gttttttgta ggccggataa ggcgtttacg ccgcatccgg
    58741 caatggtgct caaagcctga tgcgacgctg gcgcgtctta tcatgcctac aacccccctc
    58801 ataccttaag gcggataagg catttacttt atcaccgggt caaaccaaca aagcgacccg
    58861 ccttgatata aatccctggc ttcaggtgcc caacatactg taactgcgtt tctggcttaa
    58921 acgcagagac atcaccaata cgcatatgca tcagatcggc agggctaatc cagcccgatt
    58981 gcgccagtgt aagtggatgt ccggctttgg caaatgcatc agtgacaaat tccgaacaaa
    59041 accacgactt tttgtctcct tcgcccacac tgcttaactg cgctttcgcc aggccgctga
    59101 cgcactgctg gcgaaaatcc tcggagaact gattcagtga gcacatctgg cgagtcacca
    59161 taaagggaat aaattcgaca atgccgcgat agttataacc gctatctttg attttattgg
    59221 caaacgcggt gatatctgtg gcttgttgcg gggtaagatc cgggactcgt aagacgaaaa
    59281 gcttatcact atgcttcatc gcttttttaa gggaaacaat ctggacgcca gcgcctgtcg
    59341 cttctgcaac gttattatca cccagaaaga ttgcaacgtg actcacagag gaagtgctga
    59401 agacgcggat tccaaatgag gttaccccaa ggcttgagga gaacagcaaa tcgccgggtt
    59461 tgagatcagg tgccgttatt tcttttattg attgttcggt gaaagagctt tgatgctgga
    59521 atttgacagc ccatgttttt gcctcggcat ctactgctgt ggctgatggg gctggctgat
    59581 atcaacggta caagccgaaa gtaaaagaaa gctggggaga agcaggcggc agtacgcctt
    59641 tggtttatcc attttataca atccatgtaa aaaagggccc tgaaattcag gaccctttct
    59701 ggcatcagcc tttaatctgt ttcaccagat attcgacgat gtcaccagtc ttaattaact
    59761 gtttctcgcc gttgcgacga tatttatatt cgatatcgtc gttgtcgagg ttacggtcgc
    59821 ccagcacaat agtgtgcgga ataccgatca gttccatatc agcaaacatc acgcccggac
    59881 gctctttgcg gtcatccagc agcacttcga taccttgtgc acgcagttcg ctgtacagtt
    59941 tctcagcaag ctcttgtacg cggaaggatt tgtgcatgtt catcggcaga atcgccacct
    60001 ggaacggcgc gatagcgtca ggccatacga tgccgcgttc gtcgtagttc tgctcaatcg
    60061 ccgcagctac cacacgcgtt accccgatac cgtagcaacc catcgtcagg atttggttac
    60121 ggccatcttc accctgtacg gaggctttca gtgcttcgga gtacttggta cccagctgga
    60181 agatgtgacc aacttcgata ccacgtttga tcagcagcgt accctggcca tccgggcttg
    60241 gatcgccagc caccacgtta cggatatctg caacttccgg ggtagcgaca tcgcgatccc
    60301 agttgatacc gaagtagtgt ttaccatcga tgttagcacc agcagcgaaa tcactcatcg
    60361 ccgcaacggt acggtcaatc accaccggaa tcggcatgtt taccggaccc agtgaacccg
    60421 gaccggcttt aaccacagca cgaatttctt cttcggtcgc gaaagtcagc gggcttgcaa
    60481 cctgcggcag tttttctgct ttaacttcgt tcagctcgtg atcaccgcgc accagcagcg
    60541 caaccagcgg gaagctgctg ccttcaaccg ctttaaccag cagagtctta accgttttct
    60601 caatcggcag attgaactgt tcaaccagtt ccgcgatggt tttcgcgttc ggcgtatcaa
    60661 ccagcgtcat ttcctgggta gcagcagcgc gcggttcttt cggcgcgata gcttctgcca
    60721 gttcaatgtt cgctgcatag tcagaggtgt cggagaagac cacatcgtct tcaccgctct
    60781 gcgccagcac ctggaattcg tgagaggcgc tgccgccgat agaaccggtg tcggcttgca
    60841 cggcgcggaa atccagcccc atgcggctga agattttgct gtaggccgca tacattgcat
    60901 cgtaggtttc ctgcagggat tcctgagaag tatggaaaga gtaagcatct ttcatcagga
    60961 attcgcggga acgcatgacg ccgaaacgcg gacgcacttc gtcgcggaac ttggtctgga
    61021 tctgatagaa gttcaacggc agctgtttgt aagagctaag ctcgttacga atcaggtcag
    61081 tgataacttc ttcatgagtt gggccgagta cgaacggacg ctcgccacgg tcaacaaaac
    61141 gcagcagttc cggaccgtac tgttcccaac gaccactctc ttgccacaaa tcggctggct
    61201 gaaccaccgg catcgacacc tcgattgcac cggcgttgtt catctcttca cgcacgatgt
    61261 tttcgacttt tttcagaacg cgcacgccgg tcggcagcca ggtatataac ccggaggcca
    61321 gcttgcggat catcccggcg cgcagcatca gctgatggct gatcacctcg gcgtcggcag
    61381 gtgtctcctt gagagtggag agcaggtatt ggctagtacg catgttgtta cggttccagt
    61441 tggaaggtag aacaggctca aggcgagcct gggacaaaaa agtgatttag tttaccagtg
    61501 caaaagaaat gtcaaaagag aagggcgtga atttaacgcg gttccagcgc aaagacttca
    61561 aaacctgcgt cggtgacgcg ccagcgaacg ttaaaatcat gtagccagac ggcataggtt
    61621 ttgcccgttt cctcaccttt atgataggcc gggcgcgggt cctgcgccag tacttcgcgg
    61681 ataaacagcg ttaactgcgg ataacgcttc tccagcgtca aaagctgctt ttcgacctct
    61741 gcggtaaaac tcaccgccat ctctgcagct ggcgcacttt gcgcatagct ggcactggca
    61801 tcgggaagcg attcggcaaa ggggagatac ggtttgatat ccactaccgg cgtaccatcg
    61861 accagatcca gactgccgag cttcagaatc acgctgtctt tatggcaaac aacctctttc
    61921 agctctacca gcgacatacc aattgggtta gggcggaaag tagagcgtgt tgcgaaaacc
    61981 cccattctgg cgttaccgcc gaggcgcggt ggacgcacag tcggacgcca gccgccttcc
    62041 atcgtttgat gaaagacgaa aaggatccat aaatggctga acgcttccag gccgcgaacg
    62101 gcgtcggcct ggttgtaggg agcaatgaga tgcagttcgc cgttggcgct ttttaccaga
    62161 cctggctggc gcggaacggc gaatttttct ttatagggcg agcgaataac gcctatttgc
    62221 tcgaactgga aactgctcat ttcgccgtaa tgttaagcgc agagccgata catacagcct
    62281 gacgatagca gcctggcgta ccgctggtga cttcgcagct atgcagtaat accgcattgg
    62341 ctttcatttt agaggcgttg atttgcatcc gcttacgcgc ggttggaatg ctcggcggag
    62401 agtcctgatt agaggcctgg caagagtcgc cactgacttc accgagatcg cggaacggtt
    62461 tgccgactaa ttcttctgca ttggtataaa ttcggaccgg cgtggcgcgc ggcgctttcg
    62521 gttttgcagg ctccgctttc ggctggggtg cagtgctttg aacgggttcg acaggggatc
    62581 tgcttaacat ggaacagccg cttagcatga gtgctactaa acagatcggt aaagcacgca
    62641 tagtatttcc tcaatgtatg atcaaaacgt caatattgaa tcaggagctt gtaaaaatga
    62701 caagacgggc aagtgcccat cctgaatgat attacaaatt gtggaaacag cctaaaaatt
    62761 accagccttt aacagcgccg ccgttaaaca ctttgtttgc tgcttcgtaa acttcatcag
    62821 actgataagc ctggacgaat ttcttcacgt tctcggcgtc tttgttatct tcacgcgtta
    62881 cgatcaggtt tacgtacggg gagtctttat cttcgacaaa gataccgtct ttcgctggag
    62941 tcaggccaat ctggctggca taggtggtat tgataactgc cagagcgatt tgtgcgtcgt
    63001 ccagagatcg aggcagctgc ggtgcttcca gctcaacaat tttcagattt tttgggttct
    63061 caacaacatc aagtacggtc ggcagcaggc caacgccatc tttcagtttg atcaagccca
    63121 ctttttgcag cagcagcagt gaacgaccaa ggttagttgg atcgtttggc acggcaacct
    63181 gcgaaccatc ctgcagttca tccagtgatt tgattttctt ggagtaacca gcaatcggat
    63241 aaacaaaagt gttgcctact gcgaccagtt tgtagccacg atctttcagt tgctgatcaa
    63301 ggtacggttt atgctggaag gcgttggcgt cgatatcgcc tttgctcaat gcttcgtttg
    63361 gcagaacata gtcgttgaag gttaccagct caacgtccag gccatatttg tctttcgcaa
    63421 ctttctgcgc gacttctgca acctgctgtt cggcaccaac aatcacgccg actttaatgt
    63481 ggtttggatc tttttcatcc tgaccgcagc ctaccagtgc cagtgatcca atcagggctc
    63541 ccactgccgc aaaggttttg aatttgaacg ccatacctta ttccttcttc aattatttat
    63601 gttgtgttga acgttacttg cgagtgacag cccggacgat gcggtcgcct gcgaactgaa
    63661 ttaaataaac cagaatgacc agcaatacca gtaccgtatt catcaccgtc gcgttatagc
    63721 cgatgtagcc atactgatag ccaatctgac ctaaaccacc ggcaccgaca gcaccaccca
    63781 tcgcggaata accgactagg gtaatcaggg tgatagttgc cgcattcacc agacccggca
    63841 atgcttccgg taacagcact ttacggacga tctgcatcgg cgtggcaccc attgcacggg
    63901 aagcttcaat taacccggtt gggatctcca gcagagcgtt ctcgaccata cgggcaataa
    63961 acggtgctgc accaacggtt aacggaacaa tcgctgcctg caaaccaatc gatgtaccaa
    64021 caataacgcg ggtaaacgga atcatccata ccagcaagat aatgaacggg atagaacgga
    64081 aaatgttcac aatcgcagaa acggtacgat acagcttcgc gttagcaata atttgccccg
    64141 gacgcgtgac ataaagcaga acgccaaccg gcagaccaat cacaaagcca aaaaaaccgg
    64201 atacgaaggt cattgccagc gtttcccata cgccacgaac cagcagccac atcatcggct
    64261 cagacataac ccagtacctc tacttttaca tggtgttcct gcagccaggc aatggcggct
    64321 tgcgtatctt gttgtgtgcc gtgcatttca gtcagcatga tgccgaactt aacgccaccg
    64381 gcgtagtcca tctgcgcgct aataatgttg ttgttgacgt tgaaacgacg cgcggtttca
    64441 gaaagcagtg gggcatcgac cgattgaccg gtaaactcca gacgcagcat cggcacgcag
    64501 tcagtaaatg gctccgcttg cagacgttcc tggtaatctt ccgggatatc cagatgcagg
    64561 gtcgactgaa taaacttctg cgccagcggc gttttcggat gcgagaacac ttcacttacc
    64621 gtgtcctgct cgatcagttc gccattgctg atgaccgcca cgcaatcaca aatacgcttc
    64681 acaacgtcca tttcgtgggt gatcaacaga atcgtcaaac ccagacggcg gttaatgtct
    64741 ttcagcagtt cgagaataga acgtgtcgtt gccgggtcca gcgcgctggt ggcttcatca
    64801 cacagcaata ctttgggatt gctggctaat gcacgggcaa tcgccacacg ttgtttctgc
    64861 ccaccggaaa gattcgacgg gtagctatca tgcttatcgc caagaccaac caatgacagc
    64921 aattccgtca cgcgacgttt gatctcgtct ttcggtgtgt tgtccagctc cagcggcaga
    64981 gccacgttgc caaaaacagt acgcgaagag agcaggttaa aatgctggaa aatcatacca
    65041 atctggcggc gagctttggt caactcggat tctgacagcg tggtcagttc ctggccatcg
    65101 accagcacgc taccctcggt tgggcgctcc agcaggttta cacaacgtat aagcgtactc
    65161 ttacccgcgc ctgaggcacc gataacgcca taaatttgtc cagctggcac atgcaggctg
    65221 acgttgttca acgcctggat gatgcgggtg ccctggtgga acactttggt gatattcgaa
    65281 agttttatca ttgattattt attatcgtca ttaagttagt cgtggcatct cgaatgcctg
    65341 aaacgggcaa cgccgtcaat gaaatggatg ttaaggcatc cagacgtcta aatcaatcag
    65401 gtttatgcga agagcacttt cttgcaggtc gaaacatgcg atactagcgt cacatgcctt
    65461 attaaggagc tataaaaggt ggcaaagagc gtacccgcaa tttttcttga ccgtgatggc
    65521 accattaatg tcgatcacgg ctatgtccat gagatcgaca actttgaatt tatcgacggt
    65581 gttattgacg ccatgcgcga gctaaaaaaa atgggctttg tgctggtggt agtaaccaac
    65641 cagtctggca ttgctcgcgg taaatttacc gaagcacagt ttgaaacgct gaccgagtgg
    65701 atggactggt cgctggcgga ccgagatgtc gatctggatg gtatctatta ttgcccgcat
    65761 catccgcagg gtagtgttga agagtttcgc caggtctgcg actgccgtaa accacatccg
    65821 gggatgcttt tgtcagcacg cgattatttg catattgata tggccgcttc ttatatggtg
    65881 ggcgataaat tagaagatat gcaggcagcg gctgcggcga acgtgggaac aaaagtgctg
    65941 gtgcgtacgg gtaaacctat tacgcctgaa gcagaaaacg cggcggattg ggtgttaaat
    66001 agcctggcag acctgccgca agcgataaaa aagcagcaaa aaccggcata atgattaaaa
    66061 gatgagcgat tgaaataaaa atgcattttt ccacttgtct tcctgagacg actccctata
    66121 atgcgcctcc atcgacacgg cggatgtgaa tcacttcaca caaacagccg gttcggttga
    66181 agagaaaaat cctgaaattc agggttgact ctgaaagagg aaagcgtaat atacgccacc
    66241 tcgcgacagt gcgctaaagt gcgtcgcaac tgctctttaa caatttatca ggcaatctgt
    66301 gtgggcactc gaagatacgg attcttaacg tcgcaaggcg aaaaatg
//
LOCUS       DADMJE010000006        64637 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.006, whole genome shotgun sequence.
ACCESSION   DADMJE010000006 DADMJE010000000
VERSION     DADMJE010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 64637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 64637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..64637
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.006"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..95
                     /locus_tag="JN001_000357"
     CDS             <1..95
                     /locus_tag="JN001_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9051698.1"
                     /translation="LNAVLDYIDAVAATDTSTAPDVIWPELPEA"
     gene            complement(67..504)
                     /locus_tag="JN001_000358"
     CDS             complement(67..504)
                     /locus_tag="JN001_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9051699.1"
                     /translation="MFYSPSLNIFVNPALKDDYINANSWPDDALAVSDDVYNEFAINT
                     PPDDKIRVAGKNGLPTWALIPPPSYEELIQQAESERQLLLNQANEYMNSKQWPGKAAI
                     GRLKGEELAQYNLWLDYLDALELIDTSSAPDIEWPTPPAVQAR"
     gene            complement(506..892)
                     /locus_tag="JN001_000359"
     CDS             complement(506..892)
                     /locus_tag="JN001_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001537786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9051700.1"
                     /translation="MPVSHYLCIFLNVGLGELSLAGTASGVIGLNGYVTIPLIISGSR
                     RTLIIQWGQARFGGSGGEDAGYLNDFPFAFPSACYGMIVSHVGHTPSGAGILSASAIT
                     SNQFRGFSSIATAANAVLGRYIAIGV"
     gene            923..1489
                     /locus_tag="JN001_000360"
     CDS             923..1489
                     /locus_tag="JN001_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016529756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY9051701.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALNCAGCERIFEDKISGTKPDRPG
                     LKKLLRTLSAGDTLVVWKLDRLGRSMRHLVTLIEELRQRGVNFRSLTDSIDTSTPMGR
                     FFFHVMGALAEMERELIVERTRAGLAAARAKGRVGGRRPKLTTEQWAQIGRLLEAGES
                     RQRIALIFDVGVSTIYRKFPANESNESP"
     gene            1632..2804
                     /locus_tag="JN001_000361"
     CDS             1632..2804
                     /locus_tag="JN001_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath protein"
                     /protein_id="HAY9051702.1"
                     /translation="MAQDYHHGVRVVEVNEGTRSITTVSTAIVGMVCTGDDADAKMFP
                     LNKPVLITDVLTASGKAGESGTLARSLDAIADQAKPVTVVVRVPQGETEEETTTNIIG
                     AVTAEGKKTGMKALLSAQSQLGVKPRILGVPGHDTKAVATELLSVAQSLRGFAYLSAY
                     GCKTVQEAITYRENFSQREGMLIWPDFTGWDTVLNAEATAYATARALGLRAKIDEQTG
                     WHKSLSNVGVNGVTGISADVFWDLQDPATDAGLLNQNDITTLIRKDGFRFWGSRCLSD
                     DPLFAFENYTRTAQVLMDTMAEAHMWAVDKPLNPSLARDIIEGIRAKMRSLVSQGYLI
                     GGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDQYLVNFSSQVSA"
     gene            2814..3329
                     /locus_tag="JN001_000362"
     CDS             2814..3329
                     /locus_tag="JN001_000362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
                     /protein_id="HAY9051703.1"
                     /translation="MALPRKLKHLNLFNDGNNWQGIVESLTLPKFTRKYEKYRGGGMP
                     GAVDVDLGLDDSALDTEFSIGGTELLLFKQMGKATVDGIQLRFTGSIQRDDTGEVQAV
                     ELVVRGRHKEVDSGEWKTGESNTTKVTSTNSYAKLTINGEVLYEVDLINMVEIVDGVD
                     LMEAHRNALGL"
     gene            3384..3686
                     /locus_tag="JN001_000363"
     CDS             3384..3686
                     /locus_tag="JN001_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein"
                     /protein_id="HAY9051704.1"
                     /translation="MSDKQTEKTIQLDTPIMRGKTEITEIVLRKPQSGALRGTRLQAI
                     MDMDVNAMMTVIPRISSPALTAQEIAEMDPADLTAMSVEVVTFLLKKSVLAGLPTA"
     gene            3701..3820
                     /locus_tag="JN001_000364"
     CDS             3701..3820
                     /locus_tag="JN001_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY9051705.1"
                     /translation="MADIATIFHWPPSVTDVMPLTEVLEWRDKAIQRSGASHE"
     gene            3813..6890
                     /locus_tag="JN001_000365"
     CDS             3813..6890
                     /locus_tag="JN001_000365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001282780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY9051706.1"
                     /translation="MSDNNLRLQVILNAVDKLTRPFRSAQASSRELAAAVKKSRDAIK
                     QLDQAGSSLDSFRKLQAENQKLGDRLNYARQRANLLSQELGAMGPPSQRQVVALGRQR
                     LAVQRLEERQKKLQQQTALVRAELYRAGISANDGASATARITRETMRYNRQLSEQEAR
                     LRCVGEQQRKMHAARGAYARRLEVRDRIAGAGATTTAAGLAMGAPVMAAVKSYTSMED
                     AMKGVAKQVNGLRDDNGNRTARFYEMQGAIKAASEQLPMENGAVDFAALVEGGARMNV
                     ANPDDSWEDQKRDLLAFASTAAKAATAFELPADELSESLGKIAQLYKIPTRNIEQLGD
                     ALNYLDDNAMSKGADIIDVMQRLGGVADRLDYRKAAALGSTFLTLGAAPEVAASAANA
                     MVRELSIATMQSKSFFEGMNLLKLNPEVIEKQMTKDAMGTIQRVLEKVNALPQDKRLS
                     AMTMLFGKEFGDDAAKLANNLPELQRQLKLTAGNDALGSMQKESDINKDSLSAQWLLV
                     KTGAQNTFSSLGETLRQPLMDILYTVKSVTGALRRWVEANPELTGTLMKVAAVVAAVT
                     VGLGTLAVALAAVLGPLAVIRLGFSVLGIKTLPSVTATVTRTSNALSWLAGAPLALLR
                     RGLASSGNAAGLLTAPLSSLRRTASLTGNVLKTVAGAPVALLRSGLSGLRAVAVMFMN
                     PLAVLRGGLAATGTVLRMLASGPLAMLRVALYAVSGLLGALLSLIGLVVTALAGVALV
                     VWKYWQPITAFLGGVVEGFKAAAGPVSAAFEPLKPVFQWIGDKVQALWGWFTDLLTPV
                     KSTSAELQSAAAMGRRFGEALAEGLNMVMHPLDSLKSGVSWLLEKLGIVSKEAAKAKL
                     PESVTRQQPATVNADGKVMMPSGGFPSWGYGFAGMYDSGGYIPRGQFGIVGENGPEIV
                     NGPANVTSRRNTAALAAVVAGMMGVAATPAELPPLHPLALPAKGGEAMVSRAATVPPV
                     QRIEAPMQIIIQTQPGQSAQDIAREVARQLDERERRLKAKARSNYSDQGGYDA"
     gene            6887..7372
                     /locus_tag="JN001_000366"
     CDS             6887..7372
                     /locus_tag="JN001_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9051707.1"
                     /translation="MMMVLGLYVFMLRTVPYQELQYQRSWRHAANSRVNRRPSTQFLG
                     PDNDMLTLSGVLMPEVTGGRLSLLALEQMAEQGKAWPLIEGSGTIYGMYVIEGLNQTK
                     TEFFRDGMPRRIEFTLSLKRVDESLSDMFGDLSAQLNNLQGTATSALSDISKTVGGLL
                     S"
     gene            7369..8469
                     /locus_tag="JN001_000367"
     CDS             7369..8469
                     /locus_tag="JN001_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
                     /protein_id="HAY9051708.1"
                     /translation="MNFSSELLNKGNKTPAFSISIEGRDITTVLDNRLMGLTLTDNRG
                     FEADQLDLELDDADGKIVLPRRGAVITLALGWKGQPLFPKGAFTVDEIEHTGAPDRLT
                     IRARSADFRETLNTRREKSWHKTTVGEVVKEIAARHKLKMALGEDLSDKLVEHIDQTN
                     ESDGSFLMRLARQYGAIASVKNGNLLFIRQGQGKSASGKPLPVITITRKDGDSHRFTL
                     ADRGAYTGVIASWLHTREPAKKESTTVKRKRRTKKQKKEPEAKQGDYLVGTDENVLVL
                     NRTYANRSNAERAAKMQWERLQRGVASFSLQLAEGRADLYTEMPVKVSGFKQPLDDAE
                     WTITTLTHTVSPDNGFTTSLELEVRIDDFEME"
     gene            8560..8778
                     /locus_tag="JN001_000368"
     CDS             8560..8778
                     /locus_tag="JN001_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001504085.1"
                     /note="in E. coli K-12 this is in prophage P2 remnant;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9051709.1"
                     /translation="MMICPLCGSAAHTRSSFQVSSLTKERYNQCQNINCSHTFVTHET
                     FVRSIATPKESNPVQPHPMKSGQVALSL"
     gene            complement(9014..10699)
                     /locus_tag="JN001_000369"
     CDS             complement(9014..10699)
                     /locus_tag="JN001_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001024888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate:alanine antiporter"
                     /protein_id="HAY9051710.1"
                     /translation="MNINVAELLNGNYILLLFVVLALGLCLGKLRLGSIQLGNSIGVL
                     VVSLLLGQQHFSINTDALNLGFMLFIFCVGVEAGPNFFSIFFRDGKNYLMLALVMVGS
                     ALVIALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHSGMESRQLSLALDNLS
                     LGYALTYLIGLVSLIVGARYLPKLQHQDLQTSAQQIARERGLDTDANRKVYLPVIRAY
                     RVGPELVAWTDGKNLRELGIYRQTGCYIERIRRNGILANPDGDAVLQMGDEIALVGYP
                     DAHARLDPSFRNGKEVFDRDLLDMRIVTEEVVVKNHNAVGKRLAQLKLTDHGCFLNRV
                     IRSQIEMPIDDNVVLNKGDVLQVSGDARRVKTIADRIGFISIHSQVTDLLAFCAFFVI
                     GLMIGMITFQFSTFSFGMGNAAGLLFAGIMLGFMRANHPTFGYIPQGALSMVKEFGLM
                     VFMAGVGLSAGSGINNGLGAIGGQMLIAGLIVSLVPVVICFLFGAYVLRMNRALLFGA
                     MMGARTCAPAMEIISDTAHSNIPALGYAGTYAIANVLLTLAGTIIVMVWPGLG"
     gene            10969..11346
                     /locus_tag="JN001_000370"
     CDS             10969..11346
                     /locus_tag="JN001_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051711.1"
                     /translation="MKHKQRWAGAICCFVLFIVVCLFLATHMKGAFRAAGHPEIGLLF
                     FILPGAVASFFSQRREVLKPLFGAMLAAPCSMLIMRLFFSPTRSFWQELAWLLSAVFW
                     CALGALCFLFISSLFKPQHRKNQ"
     gene            complement(11376..11633)
                     /gene="grxA"
                     /locus_tag="JN001_000371"
     CDS             complement(11376..11633)
                     /gene="grxA"
                     /locus_tag="JN001_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 1"
                     /protein_id="HAY9051712.1"
                     /translation="MQTVIFGRSGCPYCVRAKDLAEKLSNERDDFQYQYVDIRAEGIT
                     KEDLQQKAGKPVETVPQIFVDQQHIGGYTDFAAWVKENLDA"
     gene            11793..12080
                     /locus_tag="JN001_000372"
     CDS             11793..12080
                     /locus_tag="JN001_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1418 family protein"
                     /protein_id="HAY9051713.1"
                     /translation="MRAIGKLPKGVLILEFIGMMLLAVALLSVSDSLSLPEPFSRPEV
                     QILMIFLGVLLMLPAAVVVILQVAKRLAPQLMNRPPQYSRSEREKDNDANH"
     gene            12064..12786
                     /gene="nfsA"
                     /locus_tag="JN001_000373"
     CDS             12064..12786
                     /gene="nfsA"
                     /locus_tag="JN001_000373"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase NfsA"
                     /protein_id="HAY9051714.1"
                     /translation="MTPTIELICGHRSIRHFTDEPISEAQCEAIINSDRATSSSSFLQ
                     CSSIIRITDKALREELVTLTGGQKHVAQAAEFWVFCADFNRHLQICPDAQLGLAEQLL
                     LGVVDTAMMAQNALTAAESLGLGGVYIGGLRNNIEAVTKLLKLPQHVLPLFGLCLGWP
                     ADNPDLKPRLPASILVHENSYQPLDKDALAQYDEQLAEYYLTRGSNNRRDTWSDHIRR
                     TIIKESRPFILDYLHKQGWATR"
     gene            12847..13749
                     /gene="rimK"
                     /locus_tag="JN001_000374"
     CDS             12847..13749
                     /gene="rimK"
                     /locus_tag="JN001_000374"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6--L-glutamate ligase"
                     /protein_id="HAY9051715.1"
                     /translation="MKIAILSRDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNINPA
                     ASSIHYKGRKLPHFDAVIPRIGTAITFYGTAALRQFEMLGSYPLNESVAIARARDKLR
                     SMQLLARQGIDLPVTGIVHSPDDTSDLIDMVGGAPLVVKLVEGTQGIGVVLAETRQAA
                     ESVIDAFRGLNAHILVQEYIKEAQGCDIRCLVVGDEVVAAIERRAKEGDFRSNLHRGG
                     AASVASITPQEREIAIKAARTMALDVAGVDILRANRGPLVMEVNASPGLEGIEKTTGI
                     DIAGKMIRWIERYATTEYCLKTGG"
     gene            13837..14313
                     /locus_tag="JN001_000375"
     CDS             13837..14313
                     /locus_tag="JN001_000375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjN domain-containing protein"
                     /protein_id="HAY9051716.1"
                     /translation="MTSLVVPGLDTLRQWLDDLGMSFFECDNCQALHLPHMQNFDGVF
                     DAKIDLIDNTILFSAMAEVRPSAVLPLAADLSAINASSLTVKAFLDMQDDNLPKLVVC
                     QSLSVMQGVTYEQFAWFVRQSEEQISMVILEANAHQLLLPTDDEGQNNVTENYFLH"
     gene            14664..15776
                     /gene="potF"
                     /locus_tag="JN001_000376"
     CDS             14664..15776
                     /gene="potF"
                     /locus_tag="JN001_000376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotF"
                     /protein_id="HAY9051717.1"
                     /translation="MTALNKKWLSGLVAGALMAVSVGTLAAEQKTLHIYNWSDYIAPD
                     TVANFEKETGIKVVYDVFDSNEVLEGKLMAGSTGFDLVVPSASFLERQLTAGVFQPLD
                     KSKLPEWKNLDPELLKLVAKHDPDNKFAMPYMWATTGIGYNVDKVKAVLGENAPVDSW
                     DLILKPENLEKLKSCGVSFLDAPEEVFATVLNYLGKDPNSTKADDYTGPATDLLLKLR
                     PNIRYFHSSQYINDLANGDICVAIGWAGDVWQASNRAKEAKNGVNVSFSIPKEGAMAF
                     FDVFAMPADAKNKDEAYQFLNYLLRPDVVAHISDHVFYANANKAATPLVSAEVRENPG
                     IYPPADVRAKLFTLKVQDPKIDRVRTRAWTKVKSGK"
     gene            15871..17004
                     /gene="potG"
                     /locus_tag="JN001_000377"
     CDS             15871..17004
                     /gene="potG"
                     /locus_tag="JN001_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter ATP-binding subunit
                     PotG"
                     /protein_id="HAY9051718.1"
                     /translation="MNDAIPRPQAKTRKALTPLLEIRNLTKSYDGQHAVDDVSLTIYK
                     GEIFALLGASGCGKSTQLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYAL
                     FPHMTVEQNIAFGLKQDKLPKAEIASRVHEMLGLVHMQEFAKRKPHQLSGGQRQRVAL
                     ARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAG
                     RIAIMNRGKFVQIGEPEEIYEHPTTRYSAEFIGSVNVFEGVLKERHEDGLVLYSPGLV
                     HPLKVDADASVVDNVPVHVALRPEKIMLCEEPPANGCNFAVGEVIHIAYLGDLSVYHV
                     RLKSGQMISAQLQNAHRHRKGLPTWGDEVRLCWEVDSCVVLTV"
     gene            17014..17967
                     /gene="potH"
                     /locus_tag="JN001_000378"
     CDS             17014..17967
                     /gene="potH"
                     /locus_tag="JN001_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotH"
                     /protein_id="HAY9051719.1"
                     /translation="MNTLEPAAQSKPPGGFKLWLSQLQMKHGRKLVIALPYIWLILLF
                     LLPFLIVFKISLAEMARAIPPYTELMEWADGQLSITLNLGNFLQLTDDPLYFDAYLQS
                     LQVAAISTFCCLLIGYPLAWAVAHSKPSTRNILLLLVILPSWTSFLIRVYAWMGILKN
                     NGVLNNFLLWLGVIDQPLTILHTNLAVYIGIVYAYVPFMVLPIYTALIRIDYSLVEAA
                     LDLGARPLKTFFTVIVPLTKGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIGRVLWQ
                     EFFNNRDWPVAAAVAIIMLLLLIVPIMWFHKHQQKSVGEHG"
     gene            17964..18809
                     /gene="potI"
                     /locus_tag="JN001_000379"
     CDS             17964..18809
                     /gene="potI"
                     /locus_tag="JN001_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HAY9051720.1"
                     /translation="MNNLPVVRSPWRIVILLLGFTFLYAPMLMLVIYSFNSSKLVTVW
                     AGWSTRWYGELLRDDAMMSAVGLSLTIAACAATAAAILGTIAAVVLVRFGRFRGSNGF
                     AFMITAPLVMPDVITGLSLLLLFVALAHAIGWPADRGMLTIWLAHVTFCTAYVAVVIS
                     SRLRELDRSIEEAAMDLGATPLKVFFVITLPMIMPAIISGWLLAFTLSLDDLVIASFV
                     SGPGATTLPMLVFSSVRMGVNPEINALATLILGAVGIVGFIAWYLMARAEKQRIRDIQ
                     RARHG"
     gene            18869..19357
                     /locus_tag="JN001_000380"
     CDS             18869..19357
                     /locus_tag="JN001_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjO family protein"
                     /protein_id="HAY9051721.1"
                     /translation="MEDETLGFFKKTSSSHARLNVPALVQVAALAIIMIRGLDVLMIF
                     NTLGVRGIGEFIHRSVQTWSLTLVFLSSLVLVFIEIWCAFSLVKGRRWARWLYLLTQI
                     TAASYLWAASLGYGYPELFSIPGESKREIFHSLMLQKLPDMLILMLLFVPSTSRRFFQ
                     LQ"
     gene            19398..20525
                     /gene="rlmC"
                     /locus_tag="JN001_000381"
     CDS             19398..20525
                     /gene="rlmC"
                     /locus_tag="JN001_000381"
                     /EC_number="2.1.1.189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(747)-C(5))-methyltransferase
                     RlmC"
                     /protein_id="HAY9051722.1"
                     /translation="MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEW
                     CAPVSGPEQGFRNKAKMVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFAALK
                     PFIARAGLTPYNVARKRGELKYILLTESQSDGGMMLRFVLRSETKLAQLRKALPWLQE
                     QLPQLKVITVNIQPVHMAIMEGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVA
                     SQLYATARDWVRQLPVKHMWDLFCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAA
                     ELGLTRLQFQALDSTQFATAQGEVPELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSC
                     NAQTMAKDIRELPGFRIERVQLFDMFPHTAHYEVLTLLVKQ"
     gene            complement(20700..21431)
                     /gene="artJ"
                     /locus_tag="JN001_000382"
     CDS             complement(20700..21431)
                     /gene="artJ"
                     /locus_tag="JN001_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9051723.1"
                     /translation="MKKLVLAALLASFTFGASAAEKINFGVSATYPPFESIGANNEIV
                     GFDIDLAKALCKQMQAECTFTNHAFDSLIPSLKFRKYDAVISGMDITPERSKQVSFTT
                     PYYENSAVVIAKKDTYKTFADLKGKRIGMENGTTHQKYIQDQHPEVKTVSYDSYQNAF
                     IDLKNGRIDGVFGDTAVVNEWLKTNPQLGVATEKVTDPQYFGTGLGIAVRPDNKALLE
                     KLNNALAAIKADGTYQKINDQWFPQ"
     gene            complement(21722..22390)
                     /gene="artM"
                     /locus_tag="JN001_000383"
     CDS             complement(21722..22390)
                     /gene="artM"
                     /locus_tag="JN001_000383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtM"
                     /protein_id="HAY9051724.1"
                     /translation="MFEYLPELMKGLHTSLTLTVASLIVALILALIFTIILTLKTPVL
                     VWLVRGYITLFTGTPLLVQIFLIYYGPGQFPTLQEYPALWHLLSEPWLCALIALSLNS
                     AAYTTQLFYGAIRAIPEGQWQSCSALGMSKKDTLAILLPYAFKRSLSSYSNEVVLVFK
                     STSLAYTITLMEVMGYSQLLYGRTYDVMVFGAAGIIYLVVNGLLTLMMRLIERKALAF
                     ERRN"
     gene            complement(22390..23106)
                     /gene="artQ"
                     /locus_tag="JN001_000384"
     CDS             complement(22390..23106)
                     /gene="artQ"
                     /locus_tag="JN001_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter permease ArtQ"
                     /protein_id="HAY9051725.1"
                     /translation="MNEFFPLASAAGMTVGLAVCALIVGLALAMFFAVWESEKWRPVA
                     WAGSALVTILRGLPEILVVLFIYFGSSQLLLTLSDGFTINLGFVQIPVQMDIENFDVS
                     PFLCGVIALSLLYAAYASQTLRGALKAVPVGQWESGQALGLSKSAIFFRLVMPQMWRH
                     ALPGLGNQWLVLLKDTALVSLISVNDLMLQTKSIATRTQEPFTWYIVAAAIYLVITLL
                     SQYILKRIDLRATRFERRPS"
     gene            complement(23113..23844)
                     /gene="artJ"
                     /locus_tag="JN001_000385"
     CDS             complement(23113..23844)
                     /gene="artJ"
                     /locus_tag="JN001_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9051726.1"
                     /translation="MKKVLIAALIAGFSLSATAAETIRFATEASYPPFESIDANNQIV
                     GFDVDLAQALCKEIDATCTFSNQAFDSLIPSLKFRRVEAVMAGMDITPEREKQVLFTT
                     PYYDNSALFVGQQGKYTSVDQLKGKKVGVQNGTTHQKFIMDKHPEITTVPYDSYQNAK
                     LDLQNGRIDGVFGDTAVVTEWLKDNPKLAAVGDKVTDKDYFGTGLGIAVRQGNTELQQ
                     KLNTALEKVKKDGTYETIYNKWFQK"
     gene            complement(23862..24590)
                     /gene="artP"
                     /locus_tag="JN001_000386"
     CDS             complement(23862..24590)
                     /gene="artP"
                     /locus_tag="JN001_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine ABC transporter ATP-binding protein
                     ArtP"
                     /protein_id="HAY9051727.1"
                     /translation="MSIQLNGINCFYGAHQALFDITLDCPQGETLVLLGPSGAGKSSL
                     LRVLNLLEMPRSGTLNIAGNHFDFTKTPSDKAIRDLRRNVGMVFQQYNLWPHLTVQQN
                     LIEAPCRVLGLSKDQALARAEKLLERLRLKPYSDRYPLHLSGGQQQRVAIARALMMEP
                     QVLLFDEPTAALDPEITAQIVSIIRELAETNITQVIVTHEVEVARKTASRVVYMENGH
                     IVEQGDASCFTEPQTEAFKNYLSH"
     gene            complement(24808..25323)
                     /locus_tag="JN001_000387"
     CDS             complement(24808..25323)
                     /locus_tag="JN001_000387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9051728.1"
                     /translation="MRYSKLTMLIPCALLLSACTTVTPAYKDNGTRSGPCVEGGPGNV
                     AQQFYDYRILHRSNDITALRPYLSDKLATLLSDASRDNNHRELLTNDPFSSRTTLPES
                     ARVASASTIPNRDARNIPLRVDLKQGDQSWQDEVLMIQEGQCWVIDDVRYLGGSVHAT
                     AGTLRQSIENR"
     gene            25449..25772
                     /locus_tag="JN001_000388"
     CDS             25449..25772
                     /locus_tag="JN001_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal-binding domain-containing protein"
                     /protein_id="HAY9051729.1"
                     /translation="MQFSTTPTLEGQTIVEYCGVVTGEAILGANIFRDFFAGIRDIVG
                     GRSGAYEKELRKAREIAFEELGSQARALGADAVVGIDIDYETVGQNGSMLMVSVSGTA
                     VKTRR"
     gene            25769..26599
                     /locus_tag="JN001_000389"
     CDS             25769..26599
                     /locus_tag="JN001_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HAY9051730.1"
                     /translation="MRRVFWLVAAALLLAGCAGEKGIVEKEGYQLDTRRQAQAAYPRI
                     KVLVIHYTADDFDSSLATLTDKQVSSHYLVPAVPPRYNGKPRIWQLVPEQELAWHAGI
                     SAWRGATRLNDTSIGIELENRGWQKSAGVKYFAPFEPAQIQALIPLAKDIIARYHIKP
                     ENVVAHADIAPQRKDDPGPLFPWQQLAQQGIGAWPDAQRVNFYLAGRAPHTPVDTASL
                     LELLARYGYDVKPDMTPREQRRVIMAFQMHFRPTLYNGEADAETQAIAEALLEKYGQD
                     "
     gene            complement(26596..27606)
                     /locus_tag="JN001_000390"
     CDS             complement(26596..27606)
                     /locus_tag="JN001_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415389.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY9051731.1"
                     /translation="MKVLVTGATSGLGRNAVEFLCQKGISVRATGRNEAMGKLLEKMG
                     AEFVPADLTELVSSQAKVMLAGIDTLWHCSSFTSPWGTQQAFDLANVRATRRLGEWAV
                     AWGVRNFIHISSPSLYFDYHHHRDIKEDFRPHRFANEFARSKAASEEVINMFSQANPQ
                     TRFTILRPQSLFGPHDKVFIPRLAHMMHHYGSILLPHGGSALVDMTYYENAVHAMWLA
                     SQEACDKLPSGRVYNITNGEHRTLCSIVQKLIDELNIDCRIRSVPYPMLDMIARSMER
                     FRKSAKEPPLTHYGVSKLNFDFTLDITRAQEELGYQPVITLDEGIEKTAAWLRDHGKL
                     PR"
     gene            complement(27705..29135)
                     /locus_tag="JN001_000391"
     CDS             complement(27705..29135)
                     /locus_tag="JN001_000391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9051732.1"
                     /translation="MPQRILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQL
                     ANVSCHKVDLSWPDNLPALLQDIDTVYFLVHSMGEGGDFIAQERQVALNVRDALREVP
                     VKQLIFLSSLQAPPHEQSDHLRARQATADILREANVPVTELRAGIIVGAGSAAFEVMR
                     DMVYNLPVLTPPRWVRSRTTPIALENLLHYLVALLDHPASEHRIFEAAGPEVLSYQQQ
                     FEHFMAVSGKRRWLIPIPLPTRWISVWFLNVITSVPPTTARALIQGLKHDLLADDTAL
                     RALIPQRLIAFDDAVRSTLKEEEKLVNSSDWGYDAQAFARWRPEYGYFAKQAGFTVKT
                     SASLAALWQVVNQIGGKERYFFGNILWQTRALMDRAIGHKLAKGRPEREYLQTGDAVD
                     SWKVIVVEPEKQLTLLFGMKAPGLGRLCFSLEDKGDYRTIDVRAFWHPHGMPGLFYWL
                     LMIPAHLFIFRGMAKQIARLAEQSTD"
     gene            complement(29146..30147)
                     /gene="ltaE"
                     /locus_tag="JN001_000392"
     CDS             complement(29146..30147)
                     /gene="ltaE"
                     /locus_tag="JN001_000392"
                     /EC_number="4.1.2.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low-specificity L-threonine aldolase"
                     /protein_id="HAY9051733.1"
                     /translation="MIDLRSDTVTRPSRAMLEAMMAAPVGDDVYGDDPTVNALQDYAA
                     ELSGKEAAIFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLFEAGGAAVLGSIQPQP
                     IDAAADGTLPLDKVAMKIKPDDIHFARTKLLSLENTHNGKVLPREYLKEAWEFTRERN
                     LALHVDGARIFNAVVAYGCELKEITQYCDSFTICLSKGLGTPVGSLLVGNRDYIKRAI
                     RWRKMAGGGMRQSGILAAAGMYALKNNVARLQEDHDNAAWMAEQLREAGADVMRQDTN
                     MLFVRVGEENAAALGEYMKVRNVLINASPIVRLVTHLDVSREQLAEVAAHWRAFLAR"
     gene            complement(30184..31902)
                     /gene="poxB"
                     /locus_tag="JN001_000393"
     CDS             complement(30184..31902)
                     /gene="poxB"
                     /locus_tag="JN001_000393"
                     /EC_number="1.2.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001532507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone-dependent pyruvate dehydrogenase"
                     /protein_id="HAY9051734.1"
                     /translation="MKQTVAAYIAKTLESAGVKRIWGVTGDSLNGLSDSLNRMGTIEW
                     MSTRHEEVAAFAAGAEAQLSGELAVCAGSCGPGNLHLINGLFDCHRNHVPVLAIAAHI
                     PSSEIGSGYFQETHPQELFRECSHYCELVSSPEQIPQVLAIAMRKAVLNRGVSVVVLP
                     GDVALKPAPEGATTHWYHAPQPVVTPEEEELRKLAQLLRYSSNIALMCGSGCAGAHKE
                     LVEFAGKIKAPIVHALRGKEHVEYDNPYDVGMTGLIGFSSGFHTMMNADTLVLLGTQF
                     PYRAFYPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVEEKADRKFLDK
                     ALEDYRDARKGLDDLAKPSEKAIHPQYLAQQISHFAADDAIFTCDVGTPTVWAARYLK
                     MNGKRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMCGDGGFSMLMGDFLSVVQMK
                     LPVKIVVFNNSVLGFVAMEMKAGGYLTDGTELHDTNFARIAEACGITGIRVEKASEVD
                     EALQRAFSIDGPVLVDVVVAKEELAIPPQIKLEQAKGFSLYMLRAIISGRGDEVIELA
                     KTNWLR"
     gene            complement(32035..33003)
                     /gene="hcr"
                     /locus_tag="JN001_000394"
     CDS             complement(32035..33003)
                     /gene="hcr"
                     /locus_tag="JN001_000394"
                     /EC_number="1.6.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH oxidoreductase"
                     /protein_id="HAY9051735.1"
                     /translation="MTMPTNQCPWRMQVHHITQETPDVWTISLICHDYYPYRAGQYAL
                     VSVRNSAETLRAYTISSTPGVSEYITLTVRRIDDGVGSQWLTRDVKRGDYLWLSDAMG
                     EFTCDDKAEDKFLLLAAGCGVTPIMSMRRWLAKNRPQADVRVIYNVHTPQDVIFADEW
                     RNYPVTLVAENNVTEGFIAGRLTRELLAGVPDLASRTVMTCGPAPYMDWVEQEVKALG
                     VTRFFKEKFFTPVAKAATSGLKFTKLQPAREFYAPVGTTLLEALESNNVPVVAACRAG
                     VCGCCKTKVVSGEYTVSSTMTLTDAEIAEGYVLACSCHPQGDLVLA"
     gene            complement(33015..34667)
                     /gene="hcp"
                     /locus_tag="JN001_000395"
                     /gene_synonym="priS"
     CDS             complement(33015..34667)
                     /gene="hcp"
                     /locus_tag="JN001_000395"
                     /gene_synonym="priS"
                     /EC_number="1.7.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415394.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxylamine reductase"
                     /protein_id="HAY9051736.1"
                     /translation="MFCVQCEQTIRTPAGNGCSYAQGMCGKTAETSDLQDLLIAALQG
                     LSAWAVKAREYGIINHDVDSFAPRAFFSTLTNVNFDSPRIVGYAREAIALREALKAQC
                     LAVDANARVDNPMADLQLVSDDLGELQRQAAEFTPNKDKAAIGENILGLRLLCLYGLK
                     GAAAYMEHAHVLGQYDNDIYAQYHKIMAWLGTWPADMNALLECSMEIGQMNFKVMSIL
                     DAGETGKYGHPTPTQVNVKATAGKCILISGHDLKDLYNLLEQTEGTGVNVYTHGEMLP
                     AHGYPELRKFKHLVGNYGSGWQNQQVEFARFPGPIVMTSNCIIDPTVSAYDDRIWTRS
                     IVGWPGVRHLDGDDFSAVITQAQQMAGFPYSEIPHLITVGFGRQTLLGAADTLIDLVS
                     REKLRHIFLLGGCDGARGERHYFTDFATIVPDDCLILTLACGKYRFNKLEFGDIEGLP
                     RLVDAGQCNDAYSAIILAVTLAEKLGCGVNDLPLSLVLSWFEQKAIVILLTLLSLGVK
                     NIVTGPTAPGFLTPDLLAVLNEKFGLRSITTVEEDMKQLLSA"
     gene            complement(34811..35710)
                     /gene="lysO"
                     /locus_tag="JN001_000396"
     CDS             complement(34811..35710)
                     /gene="lysO"
                     /locus_tag="JN001_000396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415395.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lysine exporter LysO"
                     /protein_id="HAY9051737.1"
                     /translation="MFSGLLIILVPLIVGYLIPLRQQAALKVINQLLSWMVYLILFFM
                     GISLAFLDNLASNLLAILHYSAVSITVILLCNIAALMWLERGLPWRNHHQQEKLPSRI
                     AMALESLKLCGVVVIGFAIGLSGLAFLQHATEASEYTLILLLFLVGIQLRNNGMTLKQ
                     IVLNRRGMIVAVVVVVSSLIGGLINAFILDLPINTALAMASGFGWYSLSGILLTESFG
                     PVIGSAAFFNDLARELIAIMLIPGLIRRSRSTALGLCGATSMDFTLPVLQRTGGLDMV
                     PAAIVHGFILSLLVPILIAFFSA"
     gene            complement(36204..36899)
                     /gene="aqpZ"
                     /locus_tag="JN001_000397"
     CDS             complement(36204..36899)
                     /gene="aqpZ"
                     /locus_tag="JN001_000397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin Z"
                     /protein_id="HAY9051738.1"
                     /translation="MFRKLAAECFGTFWLVFGGCGSAVLAAGFPELGIGFAGVALAFG
                     LTVLTMAFAVGHISGGHFNPAVTIGLWAGGRFPAKEVVGYVIAQVVGGIVAAALLYLI
                     ASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGATAKFAPAG
                     FAPIAIGLALTLIHLISIPVTNTSVNPARSTAVAIFQGGWALEQLWFFWVVPIVGGII
                     GGLIYRTLLEKRD"
     gene            37325..38983
                     /locus_tag="JN001_000398"
     CDS             37325..38983
                     /locus_tag="JN001_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent endonuclease"
                     /protein_id="HAY9051739.1"
                     /translation="MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTL
                     LLSPESDLYHFERDDFWFPPGDINGREHHLHIILTFRESLPGRHRVRRYRPLEACWTP
                     CTDGYHRIFYRLEGESAEDGSVMTLRSFLDKDGHPIDVEDINDQARHLVRLMPVLRLR
                     DARFMRRIRNGTVPNVPNVEVTARQLDFLARELSSHPQNLSDGQIRQGLSAMVQLLEH
                     YFSEQGAGQARYRLMRRRASNEQRSWRYLDIINRMIDRPGGRSYRVILLGLFATLLQA
                     KGTLRLDKDARPLLLIEDPETRLHPIMLSVAWHLLNLLPLQRIATTNSGELLSLTPVE
                     HVCRLVRESSRVAAWRLGPSGLSTEDSRRISFHIRFNRPSSLFARCWLLVEGETETWV
                     INELARQCGHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
                     RSLLNNDREAEREHLTALPALDMEHFMYRQGFSDVFHRVAQIPENVPMNLRKIISKAI
                     HRSSKPDLAIEVAIEAGRRGVDSVPTLLKKMFSRVLWLARGRAD"
     gene            complement(38980..39936)
                     /locus_tag="JN001_000399"
     CDS             complement(38980..39936)
                     /locus_tag="JN001_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF535 domain-containing protein"
                     /protein_id="HAY9051740.1"
                     /translation="MNMSQLTERTFTPSESLSSLSLFLSLARGQCRPGKFWHRRSFRQ
                     KFLLRSLIMPRLSVEWMNELSHWPNLNVLLTRQPRLPVRLHRPYLAANLSRKQLLEAL
                     RYHYALLRGCMSAEEFSLYLNTPGLQLAKLEGKNGEQFTLKLTMMISMDKEGDSTILF
                     RNSEGIPLAEITFTLCEYQGKRTMFIGGLQGAKWEIPHQEIQNATKACHGLFPKRLVM
                     EAACLFAQRLQVEQIIAVSNETHIYRSLRYRDKEGKIHADYNAFWESVGGVCDAERHY
                     RLPAQIARKEIAEIASKKRAEYRRRYEMLDAIQPQMATMFRG"
     gene            40087..41202
                     /gene="macA"
                     /locus_tag="JN001_000400"
     CDS             40087..41202
                     /gene="macA"
                     /locus_tag="JN001_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308991.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide transporter subunit MacA"
                     /protein_id="HAY9051741.1"
                     /translation="MKKRKTVKKRYVIALVIVIAGLITLWRILNAPVPTYQTLIVRPG
                     DLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIK
                     EVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDTAATEMAVKQAQI
                     GTIDAEIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLA
                     DMSTMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVNDAIFYY
                     ARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRNGETR
                     EREVTIGARNDTDVEIVKGLEAGDEVVIGEAKPGAAQ"
     gene            41199..43145
                     /gene="macB"
                     /locus_tag="JN001_000401"
     CDS             41199..43145
                     /gene="macB"
                     /locus_tag="JN001_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrolide ABC transporter ATP-binding
                     protein/permease MacB"
                     /protein_id="HAY9051742.1"
                     /translation="MTPLLELKDIRRSYPAGDEQVEVLKGITLDIYAGEMVAIVGASG
                     SGKSTLMNILGCLDKATSGTYRVAGQDVATLDADALAQLRREHFGFIFQRYHLLSHLT
                     AEQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRTEYYPAQLSGGQQQRVSIARALM
                     NGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHMVIIVTHDPQVAAQAERVIEIRD
                     GEIVRNPPAIEKVNVAGGTEPVVNTVSGWRQFVSGFNEALTMAWRALAANKMRTLLTM
                     LGIIIGIASVVSIVVVGDAAKQMVLADIRSIGTNTIDVYPGKDFGDDDPQYQQALKYD
                     DLIAIQKQPWVASATPAVSQNLRLRYNNVDVAASANGVSGDYFNVYGMTFSEGNTFNQ
                     EQLNGRAQVVVLDSNTRRQLFPHKADVVGEVILVGNMPARVIGVAEEKQSMFGSSKVL
                     RVWLPYSTMSGRVMGQSWLNSITVRVKEGFDSAEAEQQLTRLLSLRHGKKDFFTWNMD
                     GVLKTVEKTTRTLQLFLTLVAVISLVVGGIGVMNIMLVSVTERTREIGIRMAVGARAS
                     DVLQQFLIEAVLVCLVGGALGITLSLLIAFTLQLFLPGWEIGFSPLALLLAFLCSTAT
                     GILFGWLPARNAARLDPVDALVRE"
     gene            complement(43218..43442)
                     /gene="cspD"
                     /locus_tag="JN001_000402"
     CDS             complement(43218..43442)
                     /gene="cspD"
                     /locus_tag="JN001_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspD"
                     /protein_id="HAY9051743.1"
                     /translation="MEKGTVKWFNNAKGFGFICPEGGGEDIFAHYSTIQMDGYRTLKA
                     GQSVQFDVHQGPKGNHASVIVPVEVEAAVA"
     gene            43765..44085
                     /gene="clpS"
                     /locus_tag="JN001_000403"
     CDS             43765..44085
                     /gene="clpS"
                     /locus_tag="JN001_000403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005128368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HAY9051744.1"
                     /translation="MGKTNDWLDFDQLAEEKVRDALKPPSMYKVILVNDDYTPMEFVI
                     DVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCT
                     LEKA"
     gene            44116..46392
                     /gene="clpA"
                     /locus_tag="JN001_000404"
     CDS             44116..46392
                     /gene="clpA"
                     /locus_tag="JN001_000404"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit
                     ClpA"
                     /protein_id="HAY9051745.1"
                     /translation="MLNQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREAL
                     EACSVDLVALRQELEAFIEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNE
                     VTGANVLVAIFSEQESQAAYLLRKHEVSRLDVVNFISHGTRKDEPTQSSDPGSQPNSE
                     EQAGGEERMENFTTNLNQLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGV
                     GKTAIAEGLAWRIVQGDVPEVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQ
                     DTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKD
                     RALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDR
                     HLPDKAIDVIDEAGARARLMPVSKRKKTVNVADIESVVARIARIPEKSVSQSDRDTLK
                     NLGDRLKMLVFGQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQL
                     SKALGIELLRFDMSEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEI
                     EKAHPDVFNILLQVMDNGTLTDNNGRKADFRNVVLVMTTNAGVRETERKSIGLIHQDN
                     STDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDVIHQVVDKFIVELQVQLDQKGVSLEV
                     SQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLANELLFGSLVDGGQVTVALDKEKN
                     ELTYGFQSAQKHKAEAAH"
     gene            complement(46736..46823)
                     /locus_tag="JN001_000405"
     tRNA            complement(46736..46823)
                     /locus_tag="JN001_000405"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(46787..46789),aa:Ser,seq:gga)
     gene            complement(47077..47295)
                     /gene="infA"
                     /locus_tag="JN001_000406"
     CDS             complement(47077..47295)
                     /gene="infA"
                     /locus_tag="JN001_000406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001040186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HAY9051746.1"
                     /translation="MAKEDNIEMQGTVLETLPNTMFRVELENGHVVTAHISGKMRKNY
                     IRILTGDKVTVELTPYDLSKGRIVFRSR"
     gene            complement(47580..48284)
                     /gene="aat"
                     /locus_tag="JN001_000407"
     CDS             complement(47580..48284)
                     /gene="aat"
                     /locus_tag="JN001_000407"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HAY9051747.1"
                     /translation="MRLVQLSRHSIAFPSPEGALREPNGLLALGGDLSPARLLMAYQR
                     GIFPWFSPGDPILWWSPDPRAVLWPESLHISRSMKRFHKRSPYRVTMNYAFGQVIEGC
                     ASDREEGTWITRGVVEAYHRLHELGHAHSIEVWREDELVGGMYGVAQGTLFCGESMFS
                     RMENASKTALLVFCEEFIGHGGKLIDCQVLNDHTASLGACEIPRRDYLNYLNQMRLGR
                     LPNNFWVPRCLFSPQE"
     gene            complement(48326..50047)
                     /gene="cydC"
                     /locus_tag="JN001_000408"
     CDS             complement(48326..50047)
                     /gene="cydC"
                     /locus_tag="JN001_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter ATP-binding
                     protein/permease CydC"
                     /protein_id="HAY9051748.1"
                     /translation="MRALLPYLALYKRHKWMLSLGIVLAIVTLLASIGLLTLSGWFLS
                     ASAVAGVAGLYSFNYMLPAAGVRGAAITRTAGRYFERLVSHDATFRVLQHLRIYTFSK
                     LLPLSPAGLARYRQGELLNRVVADVDTLDHLYLRVISPLVGAFVVIMMVTIGLSFLDF
                     TLAFTLGGIMLLTLFLMPPLFYRAGKSTGQNLTHLRGQYRQQLTAWLQGQAELTIFGA
                     SDRYRTQLENTEIQWLEAQRRQSELTALSQAIMLLIGALAVILMLWMASGGVGGNAQP
                     GALIALFVFCALAAFEALAPVTGAFQHLGQVIASAVRITDLTDQKPEVTFPDTQTRVA
                     DRVSLTLRDVQFTYPEQSQQALKGISLQVNAGEHIAILGRTGCGKSTLLQLLTRAWDP
                     QQGEILLNDSPIASLNEAALRQTISVVPQRVHLFSATLRDNLLLASPGSSDEALAESL
                     RRVGLEKLLEDAGLNSWLGEGGRQLSGGELRRLAIARALLHDAPLVLLDEPTEGLDAT
                     TESQILELLAEMMREKTVLMVTHRLRGLSRFQQIIVMDNGQIIEQGTHAELLARQGRY
                     YQFKQGL"
     gene            complement(50048..51814)
                     /gene="cydD"
                     /locus_tag="JN001_000409"
     CDS             complement(50048..51814)
                     /gene="cydD"
                     /locus_tag="JN001_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/glutathione ABC transporter
                     permease/ATP-binding protein CydD"
                     /protein_id="HAY9051749.1"
                     /translation="MNKSRQKELTRWLKQQSVISQRWLNISRLLGFVSGILIIAQAWF
                     MARILQHMIMENIPREALLLPFTLLVLTFVLRAWVVWLRERVGYHAGQHIRFAIRRQV
                     LDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVSVPLLIVVAIFP
                     SNWAAALILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIF
                     GRGEAEIESIRSASEDFRQRTMEVLRLAFLSSGILEFFTSLSIALVAVYFGFSYLGEL
                     DFGHYDTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFMETPLAH
                     PQCGEVELASTDPVTIEAEDLFITSPEGKTLAGPLNFTLPAGQRAVLVGRSGSGKSSL
                     LNALSGFLSYQGSLRINGIELRDLSPESWRKHLSWVGQNPQLPAATLRDNVLLARPDA
                     SEHELQAALDNAWVSEFLPLLPQGVDTPVGDQAARLSVGQAQRVAVARALLNPCSLLL
                     LDEPAASLDAHSEQRVMEALNAASLRQTTLMVTHQLEDLADWDVIWVMQDGRIIEQGR
                     YAELSVAGGPFATLLAHRQEEI"
     gene            complement(51937..52902)
                     /gene="trxB"
                     /locus_tag="JN001_000410"
     CDS             complement(51937..52902)
                     /gene="trxB"
                     /locus_tag="JN001_000410"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HAY9051750.1"
                     /translation="MGTTKHSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQL
                     TTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRLNGDNG
                     EYTCDALIIATGASARYLGLPSEEAFKGRGVSACATCDGFFYRNQKVAVIGGGNTAVE
                     EALYLSNIASEVHLIHRRDGFRAEKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGV
                     TGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFEGQLELENGYIKVQSGIHGNATQ
                     TSIPGVFAAGDVMDHIYRQAITSAGTGCMAALDAERYLDGLADAK"
     gene            53447..53941
                     /gene="lrp"
                     /locus_tag="JN001_000411"
     CDS             53447..53941
                     /gene="lrp"
                     /locus_tag="JN001_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-responsive transcriptional regulator
                     Lrp"
                     /protein_id="HAY9051751.1"
                     /translation="MVDSKKRPGKDLDRIDRNILNELQKDGRISNVELSKRVGLSPTP
                     CLERVRRLERQGFIQGYTALLNPHYLDASLLVFVEITLNRGAPDVFEQFNTAVQKLEE
                     IQECHLVSGDFDYLLKTRVPDMSAYRKLLGETLLRLPGVNDTRTYVVMEEVKQSNRLV
                     IKTR"
     gene            54076..58104
                     /locus_tag="JN001_000412"
     CDS             54076..58104
                     /locus_tag="JN001_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HAY9051752.1"
                     /translation="MSQEYTEDKEVTLTKLSSGRRLLEALLILIVLFAVWLMAALLSF
                     NPSDPSWSQTAWHEPIHNLGGMPGAWLADTLFFIFGVMAYTIPVIIVGGCWFAWRHQS
                     SDEYIDYFAVSLRIIGVLALILTSCGLAAINADDIWYFASGGVIGSLLSTTLQPLLHS
                     SGGTIALLCVWAAGLTLFTGWSWVTIAEKLGGWILNILTFASNRTRRDDTWVDEDEYE
                     DDEEYEDENHGKQHESRRARILRGALARRKRLAEKFINPMGRQTDAALFSGKRMDDEE
                     EIIYTARGVAADPDDVLFSGNRATQPEYDEYDPLLNGAPITEPVAVAAAATTATQSWA
                     APVEPVTQTPPVTSVDVPPSQPTVAWQPVPGPQTGEPVIAPAPEGYPQQPQYAQPAVQ
                     YNEPLQQPVQPQQPYYAPAAEQPVQQPYYAPAAEQPVQQPYYATAPEQPAQQPYYAPA
                     PEQPVAGNAWQAEEQQSTFAPQSTYQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPV
                     VEETKPARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVKEPEPIKSSLKAPSAAAVP
                     PVEAAAAVSPLASGVKKATLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKR
                     IRVPTRRELASYGIKLPSQRAAEEKAREARRNQYDSGDQYNDDEIDAMQQDELARQFA
                     QTQQQRYGEQYQHDVPVNAEDADAAAEAELARQFAQTQQQRYSGEQPAGANPFSLDDF
                     EFSPMKALLDDGPHEPLFTPIVEPVQQPQQLVAPQQQYQQPQQPVAPQQQYQQPQQPV
                     APQPQYQQPQQQVAPQPQYQQPQQPVAPQQQDTLLHPLLMRNGDSRPLHKPTTPLPSL
                     DLLTPPPSEVEPVDTFALEQMARLVEARLADFRIKADVVNYSPGPVITRFELNLAPGV
                     KAARISNLSRDLARSLSTVAVRVVEVIPGKPYVGLELPNKKRQTVYLREVLDNAKFRD
                     NPSPLTVVLGKDIAGEPVVADLAKMPHLLVAGTTGSGKSVGVNAMILSMLYKAQPEDV
                     RFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRYKLMSALGVRNL
                     AGYNEKIAEADRMMRPIPDPYWKPGDSMDAQHPVLKKEPYIVVLVDEFADLMMTVGKK
                     VEELIARLAQKARAAGIHLVLATQRPSVDVITGLIKANIPTRIAFTVSSKIDSRTILD
                     QAGAESLLGMGDMLYSGPNSTLPVRVHGAFVRDQEVHAVVQDWKARGRPQYVDGITSD
                     SESEGGAGGFDGAEELDPLFDQAVQFVTEKRKASISGVQRQFRIGYNRAARIIEQMEA
                     QGIVSEQGHNGNREVLAPPPFD"
     gene            58259..58870
                     /gene="lolA"
                     /locus_tag="JN001_000413"
     CDS             58259..58870
                     /gene="lolA"
                     /locus_tag="JN001_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010354356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein chaperone LolA"
                     /protein_id="HAY9051753.1"
                     /translation="MKKIAITCALLSSLVASSVWADAASDLKSRLDKVSSFHASFTQK
                     VTDGSGAAVQEGQGDLWVKRPNLFNWHMTQPDESILVSDGKTLWFYNPFVEQATATWL
                     KDATGNTPFMLIARNQSSDWQQYNIKQNGDDFVLTPKASNGNLKQFTINVGRDGTIHQ
                     FSAVEQDDQRSSYQLKSQQNGAVDAAKFTFTPPQGVTVDDQRK"
     gene            58881..60224
                     /locus_tag="JN001_000414"
     CDS             58881..60224
                     /locus_tag="JN001_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HAY9051754.1"
                     /translation="MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRA
                     IEAGHLHSMILWGPPGTGKTTLAEVIARYANADVERISAVTSGVKEIREAIERARQNR
                     NAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELNSALLSRARVY
                     LLKSLSTEDIEQVLTQAMEDKTRGYGGQDIVLPDETRRAIAELVNGDARRALNTLEMM
                     ADMAEVDDSGKRVLKPELLTEIAGERSARFDNKGDRFYDLISALHKSVRGSAPDAALY
                     WYARIITAGGDPLYVARRCLAIASEDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIA
                     QAIVYLACAPKSNAVYTAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYA
                     HDEANAYAAGEVYFPREIAQTRYYFPTNRGLEGKIGEKLAWLAEQDQNSPIKRYR"
     gene            60315..61607
                     /gene="serS"
                     /locus_tag="JN001_000415"
     CDS             60315..61607
                     /gene="serS"
                     /locus_tag="JN001_000415"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000887397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HAY9051755.1"
                     /translation="MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKT
                     ENLQAERNSRSKSIGQAKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALT
                     IPNLPADEVPVGKDENDNVEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGS
                     RFVVMKGQIARMHRALSQFMLDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLF
                     HTRPLEEEADTSNYALIPTAEVPLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGR
                     DTRGLIRMHQFDKVEMVQIVRPEDSMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMG
                     FGACKTYDLEVWIPAQNTYREISSCSNVWDFQARRMQARCRSKSDKKTRLVHTLNGSG
                     LAVGRTLVAVMENYQQADGRIEVPEVLRPYMNGLEYIG"
     gene            61846..64290
                     /gene="dmsA"
                     /locus_tag="JN001_000416"
                     /pseudo
     CDS             61846..64290
                     /gene="dmsA"
                     /locus_tag="JN001_000416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415414.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethylsulfoxide reductase subunit A"
     gene            64301..>64637
                     /locus_tag="JN001_000417"
     CDS             64301..>64637
                     /locus_tag="JN001_000417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY9051756.1"
                     /translation="MTTQYGFFIDSSRCTGCKTCELACKDYKDLTPEVSFRRIYEYAG
                     GDWQEDNGVWHQNVFAYYLSISCNHCEDPACTKVCPSGAMHKREDGFVVVDEDVCIGC
                     RYCHMACPYG"
BASE COUNT        15891 a        16221 c        17414 g        15111 t
ORIGIN      
        1 gacttaacgc cgtgttggat tacattgacg cggtggcggc aacagatacc agcaccgcgc
       61 cggatgtcat ctggcctgaa ctgccggagg cgtaggccat tcaatatctg gagcactgga
      121 ggtatcaatc agttccagtg cgtccagata atccagccac aaattatatt gcgccagttc
      181 ctcacctttc agacgaccaa tagcggcttt accgggccat tgtttactgt tcatgtattc
      241 gttggcctga ttaagcaata attgcctttc tgattctgcc tgttgaataa gttcttcata
      301 tgatggtgga ggtattagtg cccatgtggg taatccattt tttcctgcaa cacgaatttt
      361 gtcatctggg ggcgtattga ttgcaaattc attataaaca tcatcactga cagccagagc
      421 atcatctggc catgaatttg cattaatgta atcatcctta agcgcaggat tcacaaaaat
      481 gtttaaagat ggactataaa acatattaaa cccctatagc gatataacga cctaatacag
      541 catttgcagc agtcgctatg cttgaaaaac cgcggaactg atttgatgta attgcagaag
      601 ccgacaggat tcctgcgcct gaaggtgtat gccccacatg actaactatc atcccataac
      661 atgctgacgg aaaggcaaaa ggaaaatcat taagatatcc tgcatcttca ccaccagacc
      721 caccaaatct cgcctgcccc cactgaataa tcagtgttct ccgggaacct gaaataatta
      781 acggaatcgt tacataccca ttcaggccaa tgacacccga tgcagtgcca gccagagata
      841 attctcccaa accaacgttt aagaaaatgc agagataatg gctaactggc atcatccccg
      901 gtttttattc aggggattga tcatgcttat tggctatgta cgcgtgtcaa caaatgacca
      961 gaacaccgat ttgcaacgta atgcactgaa ctgcgcggga tgtgagcgga tttttgagga
     1021 taaaatcagt ggcactaagc ccgacagacc ggggcttaaa aaactgctca ggacactatc
     1081 ggcaggagac acgctggttg tctggaagct ggacagactg ggacgcagta tgcggcatct
     1141 tgttacgctg atagaagagt tgcgccagcg tggtgtgaat ttccgaagcc tgactgacag
     1201 tattgatacc agtaccccaa tgggccgttt cttttttcac gtcatggggg ctctggctga
     1261 aatggaacgt gaactgatag ttgaacgtac cagagcaggg ctggctgcag ctcgtgccaa
     1321 aggcagagta ggtggacgcc gtcctaagtt gaccaccgaa cagtgggcac agattggacg
     1381 tttactcgag gccggagaat caagacagcg tattgcactg atttttgatg tgggcgtttc
     1441 taccatttat agaaaatttc cggcgaatga gagcaatgaa tcgccctgag tcagtattat
     1501 tttgattttt cctgtaagcg gacaaatacc gtcattttgt gtgaataacg acacaactgc
     1561 gcttagctgt ttgtcaggca caatcacttc aacatagggc gaagcctaat ccaatcagga
     1621 ggttcgccac tatggctcag gattaccacc acggggtgcg cgttgttgaa gtcaacgaag
     1681 gcacccgatc cattaccacg gtgagcaccg ccatcgtggg tatggtctgc acgggcgatg
     1741 atgccgatgc aaaaatgttt cctcttaata aacctgtgct gatcactgat gtgctgaccg
     1801 ccagcggtaa agcgggtgag tctggcacgc tggcccgttc gctggatgcc atcgctgacc
     1861 aggcaaaacc cgtgaccgtt gttgtgcgtg tgccgcaggg tgaaacggaa gaagaaacca
     1921 caaccaatat cattggcgca gtgaccgccg agggtaaaaa aacaggtatg aaagccctgt
     1981 tatctgccca gtcacagctc ggcgttaaac cgcgcattct cggcgtgcca ggtcacgaca
     2041 cgaaggcggt agctactgag ttgctgagcg tggcgcaaag cctgcgtgga tttgcttacc
     2101 tgtcagcgta tggttgcaag acggtgcagg aagcaatcac ttaccgtgaa aacttcagtc
     2161 agcgtgaagg aatgctgatc tggcccgact ttactggctg ggacacggtg ctgaatgccg
     2221 aagcaacggc ttatgccacc gcccgtgcgc tcggtctgcg cgctaaaatt gatgagcaga
     2281 ccggatggca caaaagcctg tccaacgtgg gcgtgaacgg tgtcaccgga atttctgctg
     2341 atgtgttctg ggatctgcag gacccggcaa ccgatgcagg tctgcttaac cagaacgata
     2401 tcaccacgct tatccgcaaa gacggtttcc gcttctgggg ttcccgctgt ctgagcgatg
     2461 atccgctctt tgccttcgaa aactacaccc gcacggcgca ggtgctgatg gacacgatgg
     2521 cagaagcgca catgtgggcg gtggacaaac cgctgaaccc gtcgctggcc cgcgacatta
     2581 tcgaaggtat ccgcgccaaa atgcgtagcc tggtcagtca gggctatctc attggtggtg
     2641 attgctggct ggacgagtcg gtgaacgata aagacacgct gaaagccggg aaactcacca
     2701 tcgattacga ctacacgcca gtgccgccac ttgaaaacct gatgctgcgt cagcgcatca
     2761 ccgatcagta cctggtgaat ttctccagcc aggtcagcgc gtaaggggac aacatggctt
     2821 taccacgcaa attaaaacac ctgaacctgt ttaacgacgg gaacaactgg caggggatcg
     2881 ttgagtcgct gacgctgccg aaattcaccc gcaaatatga gaagtatcgc ggcggcggta
     2941 tgcccggagc ggtggatgtg gatctgggac tggatgacag tgcactggat acagaatttt
     3001 ccattggtgg tactgaactg ctgctgttta agcagatggg caaagccacg gtggatggca
     3061 tccagctgcg ctttaccggc tctattcagc gtgatgatac cggggaagtg caggccgtgg
     3121 agcttgtggt gcgtggacgt cacaaagaag tagattccgg cgagtggaag acgggcgaaa
     3181 gcaacactac caaagtgacc agtaccaaca gctacgcgaa gctgaccatc aatggtgagg
     3241 tgctctatga agtggacctg atcaacatgg tggaaattgt ggacggtgtg gacctgatgg
     3301 aagcgcaccg caacgccctc ggcctctgat gtatctgaac ggcgcggaat gccgcgccag
     3361 aacctaattt acaggacaac aaaatgagcg ataagcagac tgaaaagacc attcaactgg
     3421 atactcccat catgcgcggt aaaacagaaa ttaccgaaat tgtgttgcgt aaaccgcagt
     3481 ccggtgcgct gcgcggcaca cgcctgcagg ccattatgga tatggatgtg aacgcgatga
     3541 tgaccgtgat cccccgcatc tccagtccgg cactgactgc acaggaaatt gcagagatgg
     3601 acccggcaga tctcactgcc atgtcggttg aggttgtcac ttttttgttg aagaagtcgg
     3661 tgcttgccgg tttaccgaca gcctgacggt tgacgatctg gtggctgata tcgccaccat
     3721 ctttcactgg ccgccatccg ttactgacgt tatgccgctg accgaagtgc tggaatggcg
     3781 ggataaagcg attcagagaa gcggggccag ccatgagtga caataacctg cgtctgcagg
     3841 tgattcttaa tgcggttgac aaactcaccc gcccatttcg atccgcgcag gccagttcaa
     3901 gagaactggc tgctgctgtc aaaaaatccc gcgatgcaat aaagcagctt gatcaggccg
     3961 ggagcagtct ggacagcttc cgaaagctgc aggcagaaaa tcagaaatta ggcgacaggc
     4021 tgaactatgc ccgccagcgt gcaaatttgc tcagtcagga actgggagcg atggggccgc
     4081 cttcgcaacg tcaggttgtt gctctgggcc gtcaacggct ggctgttcag cgcctagaag
     4141 aacgccagaa aaagctgcag cagcagacgg cgcttgtgcg tgcagaactt tatcgtgctg
     4201 gtatttcagc taatgatggc gccagtgcga cggcccgcat tacccgtgaa acgatgcgtt
     4261 ataacaggca gctttctgag caggaagcga ggttacgatg tgtcggggag caacagcgaa
     4321 aaatgcacgc cgcccggggg gcttacgcca ggcgtcttga ggtaagggat cgtattgcag
     4381 gtgccggagc caccaccacg gctgcagggc tggcaatggg cgcaccagtg atggcggcag
     4441 taaaaagcta taccagcatg gaagatgcca tgaaaggtgt ggcaaagcag gtcaatggtc
     4501 tgcgtgacga taatggcaac cgcactgcgc gtttttacga aatgcagggt gccatcaagg
     4561 ctgccagcga acagttgccg atggaaaacg gtgctgtgga cttcgccgca ctggttgaag
     4621 gtggtgcgcg catgaacgtc gcaaaccctg acgacagctg ggaagaccag aaacgtgacc
     4681 tgctggcctt cgccagcacg gcggcaaagg cggcaacagc ctttgaactg ccagcggatg
     4741 aactgtcaga aagtctgggg aaaatcgccc agctctacaa aatccctacc cgcaatattg
     4801 agcagctcgg tgatgcgctg aactatctgg atgataacgc catgtcgaaa ggggcggaca
     4861 tcattgatgt catgcaacgc ctgggcggtg tggctgaccg tctggattat cgtaaagcgg
     4921 cggcgctggg ttccaccttc ctgacactcg gcgctgcgcc tgaggttgca gccagtgcag
     4981 caaacgcgat ggtgcgtgaa ttgtccattg ccaccatgca aagcaagagt ttctttgaag
     5041 ggatgaatct gctgaaactc aatccagaag tgattgaaaa gcagatgacg aaggatgcga
     5101 tgggaactat ccagcgggtg ctggagaagg tgaatgcgct gccacaggat aagcgcctgt
     5161 ctgccatgac catgttgttt ggtaaagagt ttggcgatga cgcagcgaaa ctggcaaaca
     5221 acctgccgga acttcagcgc cagttaaaac tgactgcggg caatgatgcg ctcggttcca
     5281 tgcagaaaga atccgacatc aacaaggatt cactttctgc tcagtggttg ctggtcaaaa
     5341 ccggagcaca gaacaccttc agcagcctgg gggaaacgct gcgccagccg ctgatggata
     5401 ttctgtacac ggtgaaaagc gtcacggggg cgttgcgtcg ctgggtggaa gctaacccgg
     5461 aactgacggg cactctgatg aaagtagccg ctgtggtagc tgccgttacc gtgggcctcg
     5521 gcaccttagc ggtggcgctg gctgcagtgc tggggccgct ggcagtcatc cgtctgggat
     5581 tctctgtgct gggtatcaaa acgttacctt ccgttacggc aacagtaacc cgaaccagca
     5641 acgcgttgtc ctggctggct ggcgcaccac tggcactgct gcgacgcggg cttgcttcat
     5701 cgggcaacgc tgcaggttta cttactgcgc cgttgtcgtc tttgcgccgc acggcatcac
     5761 tgacgggaaa tgtcctgaaa actgtagcag gtgcgccggt tgcacttttg cggtctggat
     5821 tatccggttt acgtgcggtt gctgtgatgt ttatgaatcc actggcggta ctacgcggcg
     5881 gactggctgc cacaggcacg gtgctgcgta tgctcgcatc cggtccactg gcgatgctgc
     5941 gcgttgccct gtatgccgtc tctggtctgt taggtgctct gctcagtctg ataggtcttg
     6001 tggttactgc actggcgggt gtggcgctgg ttgtctggaa atactggcag cccatcaccg
     6061 catttctcgg tggcgtggtg gaaggattca aagcggcggc aggtcctgtc agtgccgcgt
     6121 tcgaaccgct taagcctgtg ttccagtgga ttggcgacaa agtacaggcg ctgtggggct
     6181 ggtttactga tctgctgacg cccgttaagt cgacctctgc cgaactgcag agtgcagcgg
     6241 caatggggcg acgattcggg gaggctctgg cggaagggct gaatatggtc atgcatccgc
     6301 tggactccct gaaatccggc gtttcctggt tgctggagaa acttggcatt gtcagtaaag
     6361 aggccgcaaa ggcgaaactg ccggaaagcg tgacgcgtca gcaacctgcg acggtgaatg
     6421 cagacggtaa agtgatgatg ccatcgggtg gttttccgtc atggggatat ggctttgcgg
     6481 ggatgtatga cagcggcggg tatatcccgc gcgggcagtt tggcatcgtc ggtgaaaacg
     6541 ggccggaaat tgttaacggc ccggcaaatg tgaccagccg gagaaataca gctgcactgg
     6601 ctgccgttgt tgccggaatg atgggtgttg ctgctacgcc agcagagctt ccaccgttgc
     6661 accctttggc acttcccgcg aaaggcggtg aagcgatggt gagtcgtgca gccactgtgc
     6721 cgcccgttca acggattgag gcaccgatgc agatcatcat tcaaacgcag ccaggacaaa
     6781 gtgcgcagga tattgcgcgg gaggtggccc gccagcttga tgaacgtgaa cgcaggctga
     6841 aggcaaaagc caggagtaac tacagcgatc aggggggata cgacgcatga tgatggtgct
     6901 gggattgtac gtgtttatgc tgcgcaccgt gccgtatcag gagctgcagt atcaacgcag
     6961 ctggcgacat gcggcaaaca gccgggtaaa ccgacgcccg tcaacgcagt ttctgggacc
     7021 ggacaacgac atgctgacgc tttctggtgt tcttatgccg gaggtaacgg gcggcaggct
     7081 gtcgttgctg gctctggagc agatggcaga acagggaaaa gcatggcccc tgattgaagg
     7141 cagcggcacg atttacggca tgtatgtgat tgagggactg aatcagacta aaacggagtt
     7201 tttccgcgac ggtatgccgc gccggattga gttcaccctg tcgctaaaac gcgtggatga
     7261 atccctgtcc gatatgttcg gtgatctcag tgcgcaactg aataatctgc agggaacggc
     7321 aacatctgcc ttaagcgata tcagtaaaac ggtgggaggg ctgctgtcgt gaatttcagc
     7381 tctgaactgc ttaacaaagg caacaaaact ccggcattca gcatcagtat tgaaggcagg
     7441 gatatcacca ctgtgctgga caaccgcctg atggggctga cgctgacgga taaccggggc
     7501 tttgaagcgg accagcttga tctggagctg gacgacgccg atggaaaaat cgtgctgccg
     7561 cgccgtgggg ctgtcattac gctggcgctg ggctggaagg gacagccgct tttcccgaaa
     7621 ggggcattca cggtggacga gattgaacac actggcgcac cggatcgcct gactatccgg
     7681 gcgcgaagtg ctgattttcg tgaaacgctg aatacccgcc gtgaaaagtc gtggcacaag
     7741 accaccgttg gggaagtggt gaaggaaata gctgcgcggc acaaactgaa gatggcattg
     7801 ggtgaagact tgtcggataa actcgtggag catatagacc agactaatga gagtgacggc
     7861 agttttttga tgcggctggc gcgccagtac ggtgctattg cgtcggtgaa aaatggcaat
     7921 ctgttattca tccggcaggg gcagggtaaa agcgccagcg gtaaaccact accggtgatc
     7981 actatcacac gcaaggacgg cgacagtcac cgctttaccc tggcagatcg cggagcttac
     8041 acgggcgtca ttgccagctg gttgcatacc cgcgaacccg cgaagaaaga aagcaccacg
     8101 gtgaagcgta agcgcaggac taagaagcag aagaaagagc cggaagcgaa gcagggcgat
     8161 tacctggtgg gtacggatga aaacgtgctg gtacttaatc gcacttatgc caaccggagc
     8221 aacgccgaac gggcagcgaa aatgcagtgg gaacgcctgc aacgcggcgt tgcatcattc
     8281 tcgctacaac tggcggaagg gcgggcagat ctctacacag aaatgcctgt gaaggtcagt
     8341 ggctttaaac agccgctaga tgatgcggaa tggaccatta cgactctgac gcatactgtc
     8401 agcccggata acggttttac gaccagtctg gagcttgaag tgaggattga tgatttcgaa
     8461 atggaatgat tcttcgcaat ggagaacttt taagtttgca aaatggaata atgcggtatc
     8521 attattgtga atttagcaaa aatggggaga actcgaaaaa tgatgatttg cccactgtgt
     8581 ggaagtgccg cccatactcg cagcagtttt caggtatctt cattgaccaa agagcgttac
     8641 aaccagtgcc agaacattaa ctgcagccat acttttgtta cccatgaaac ttttgttcgt
     8701 tcgattgcaa cgccaaaaga gtcaaatccg gttcagccgc atccaatgaa atcaggacag
     8761 gtggcgctct ctctttgacg ctgccgccat tttgtcgcca tcgttaaaaa acagtgcttc
     8821 taacatcatg attttaaaag gcataaattt cagacaacaa aaaacccatc aaccttgaac
     8881 cgaaatggcg gggttgatgg gctccacaaa atggggacat caaagaaaag cagtggcact
     8941 aattaagact gatgccctgc ggaaaagttc tgcggttgtg caaaaaaatt tcattttcag
     9001 ggcaacttca gttttatcct aatcctggcc ataccatgac gatgattgtc cctgccagcg
     9061 tcagcaggac gttggcgatt gcgtaggtgc ccgcatagcc cagcgcaggg atgttactgt
     9121 gagctgtatc actgatgatc tccattgccg gcgcgcaggt gcgtgcgccc atcattgcgc
     9181 cgaacaacag tgcgcggttc attcgcaata cataagcacc gaacaagaaa cagataacca
     9241 cgggcacaag actgacaatt aatccggcaa tcaacatctg accgccaatc gcgcccaggc
     9301 cgttattaat accgctaccg gcgctcagac caacgcctgc cataaacacc atcaagccga
     9361 actctttcac catgcttaat gcaccttgcg gaatgtaacc gaaggtcggg tggttagcac
     9421 gcataaagcc cagcataatt ccggcgaata acaacccggc agcgttcccc atgccgaaac
     9481 tgaatgtgct gaactggaag gtgatcatcc cgatcatcag cccaataaca aagaaggcgc
     9541 aaaatgccag caggtcagtg acctggctgt gaatcgagat aaagccgatg cgatcggcga
     9601 tggtttttac gcgacgggca tcaccgctga cttgtaaaac gtcacctttg ttaagcacga
     9661 cgttgtcatc tatcggcatc tcaatctggc tacgaatgac gcggttaagg aagcaaccgt
     9721 gatcggtcaa cttcagttgt gcgagacgtt tacctacagc gttatggttt ttaacgacca
     9781 cttcttcagt gacgatacgc atgtcgagaa ggtcacgatc gaaaacttct ttaccgttac
     9841 ggaagctggg atcgagtcgg gcatgggcgt cgggatagcc taccaacgct atttcatcgc
     9901 ccatttgtag cacggcatca ccgtctggat ttgccagaat cccgttacgt cgaatacgtt
     9961 caatgtagca gccggtttgt cgataaatac ccagttcacg cagatttttg ccgtcggtcc
    10021 aggccaccag ctccgggccg acgcgatagg cgcggatcac cggtaaataa accttacggt
    10081 tggcatcagt gtccaggcca cgttcgcggg cgatttgctg ggcgctggtc tgtaagtcct
    10141 gatgctgcaa tttcggcaag taacgcgcac caacaatcaa actcaccaga ccgattaaat
    10201 aggttaaggc atacccgagg ctcagattat ccagtgccag tgagagctgc ctgctttcca
    10261 tgccggaatg acgcagtgta tcgccagcac cgaccagaac cggtgtcgac gtcatagagc
    10321 ctgctaacat accggccgtc aggccaatat cccagccaaa cagcttacct aaccctaagg
    10381 cgatcaccag cgcactgcca accatcacca gtgctaacat taggtaattt ttcccatcgc
    10441 gaaaaaaaat ggaaaaaaag ttcggtccgg cttcgacccc gacgcagaaa ataaacagca
    10501 taaagccaag attaagcgca tcggtgttaa tgctgaaatg ttgttggcct aataacagcg
    10561 atacgactaa aacgccaatg gaattaccca gttggatcga accaagtcgt aactttccga
    10621 gacatagccc aagcgcgagg accacaaata ataacagaat gtaattccca tttaacaatt
    10681 cggcgacgtt tatattcacg gaggctaact tcttgtttac tagtaagctg ttgaaagaaa
    10741 tcgtaattta cgataatgtt ttttaccaga attcagggcg cagattcatt cagcgcacct
    10801 aaacgatagt aaagtaacaa tatattttac tagtgtaatc acattaggta tcaacggcta
    10861 tatgaattgc gttggcctat attagcatgg aatgcgaagc ggctttatct tactgaacgc
    10921 cacactggcg aaaaatgtgt tcgatagacg cagtgtcagg aggaacgagt gaaacataaa
    10981 caacgttggg cgggggcaat ctgctgtttt gtcctcttca ttgtggtgtg cctttttctg
    11041 gcgacgcaca tgaaaggcgc ttttcgggct gccgggcatc ctgaaatcgg cttgctgttt
    11101 ttcattcttc ctggagcagt tgccagtttc ttttcacagc gtagagaagt cctgaaacct
    11161 ctatttggcg caatgctggc ggcaccctgt tcaatgctca ttatgcggct gtttttttca
    11221 ccgacgcgct cattctggca agagctggca tggttactaa gcgcggtgtt ctggtgtgcg
    11281 ctgggggcac tgtgtttctt atttatcagt agtttgttta aaccacagca cagaaaaaat
    11341 cagtaaagcc ctcaacgcga gggcttgtca gacgatcagg cgtccagatt ttctttcacc
    11401 catgcagcaa aatcggtata gccgccgata tgttgctgat cgacaaaaat ctgcggcacg
    11461 gtttctacgg gtttacctgc cttttgttgt agatcttctt tagtgatccc ttccgcacga
    11521 atatctacat actgatactg aaaatcatcg cgttcattgc tcaatttctc agccagatct
    11581 tttgcacgca cacagtaagg gcaacccgaa cgaccaaaaa taacggtttg cattatttct
    11641 ctcctcatag atttatgcct gtaatgatca cgctaaaatg tattcgctga aagtaggttt
    11701 aacctgttgc attaattgct aaaagctata actgttaaac acaatacagt gaaaagtttt
    11761 agactgaagg ctcactttgc agagggaagc gtatgcgcgc gatcggtaaa ttgcctaaag
    11821 gcgtgttgat actggaattt atcggaatga tgctactggc ggtggcgctg ctgtcggtaa
    11881 gcgactccct gtcgctgcct gagccatttt ctcggccaga agtgcagatt ctgatgattt
    11941 ttctcggtgt tttgctcatg cttcccgctg cggtggtggt tattcttcag gtggcaaaac
    12001 gtcttgcccc acagctgatg aaccgtccac cgcaatattc acgttcagaa agagaaaaag
    12061 ataatgacgc caaccattga acttatttgt ggccatcgct ccattcgcca tttcactgat
    12121 gaacccattt ccgaagcgca gtgtgaggcg attattaaca gcgaccgtgc gacgtccagt
    12181 tccagttttt tgcagtgtag tagcattatt cgcattaccg acaaagcatt acgtgaagaa
    12241 ctggtgacgc tgaccggcgg gcaaaaacac gtagcgcaag cggcggagtt ctgggtgttc
    12301 tgtgccgact ttaaccgcca tttacagatc tgtccggatg ctcagctcgg cctggcggaa
    12361 caactgttgc tcggtgtcgt tgatacggca atgatggcgc agaatgcatt aaccgcagcg
    12421 gaatcgctgg gattgggcgg ggtatatatc ggcggcctgc gcaataatat tgaagcggtg
    12481 acgaaactgc tgaaattacc gcagcatgtt ctgccgctgt ttgggctgtg ccttggctgg
    12541 cctgcggata atccggatct caagccgcgt ttaccggcct ccattttggt gcatgaaaac
    12601 agctatcaac cgctggataa agacgcactg gcgcagtatg acgagcaact ggcggaatat
    12661 tacctcaccc gtggcagcaa taatcgccgg gatacctgga gcgatcatat ccgccgaaca
    12721 atcattaaag aaagccgccc atttattctg gattatttgc acaaacaggg ttgggcgacg
    12781 cgctaaaacc gccacgtcga tgtatgatac gcgggctttt gaccaggtct gacagagagg
    12841 tgcagggtga aaattgccat attgtcccgg gatggaacgc tctattcgtg taagcggctg
    12901 cgtgaagccg ctatacagcg cggtcacctg gttgaaattc ttgatccgct ttcttgctac
    12961 atgaacataa atcctgcggc gtcttctatt cactacaaag gccgcaagtt accccatttt
    13021 gacgcagtga tcccgcgtat tggcaccgcc attacctttt atgggacggc ggcactgcgc
    13081 cagttcgaga tgctggggag ctatccgctc aatgagtcgg tcgccattgc ccgggcgcgt
    13141 gacaaattgc gttccatgca actgctggcg cgtcagggca tcgacctgcc tgtcacgggc
    13201 attgtgcatt cgccggatga taccagcgat ttaatcgaca tggtcggtgg tgcgccgctg
    13261 gtggtcaagt tggttgaagg cacgcaggga attggcgtcg tgctggcgga gacgcgtcag
    13321 gcggcggaaa gcgtgattga cgctttccgc ggtctgaacg cgcatattct ggtgcaggaa
    13381 tatatcaaag aggcgcaagg gtgcgatatc cgctgtctgg ttgttggcga tgaagtggtc
    13441 gctgcgattg aacggcgggc gaaagagggc gattttcgtt ccaatttgca tcgtggcggc
    13501 gcggcaagcg tcgccagtat cacaccacag gagcgtgaaa tcgcgataaa agccgcgcga
    13561 acgatggcgc tggacgttgc tggtgtggat attctgcgtg ctaatcgcgg gccgttggtg
    13621 atggaagtga atgcgtcgcc ggggctggaa ggaatagaaa aaaccactgg tatcgacatc
    13681 gcgggtaaaa tgatccgctg gatcgaacgc tacgctacga cagaatattg cctgaaaacg
    13741 ggtggttagt cgcaatcaca ttactgatca tggttttgcc tgcgcttttt gcgtaagctg
    13801 tgccggtctt tttatcgaaa gaggttgtac aaaattatga catcgctggt cgttcctggt
    13861 ctggatacgc tgcgtcaatg gctcgatgac ctggggatga gtttttttga atgtgataac
    13921 tgtcaggctc tgcatctgcc ccatatgcag aatttcgacg gtgtctttga tgccaaaatc
    13981 gatctgatcg ataacacgat cctgttttct gccatggcgg aagtccgacc ttcagccgta
    14041 ttgccgctgg cggcggattt atctgccatc aatgccagtt cgctgaccgt gaaagcattt
    14101 cttgatatgc aggatgataa tctgccaaag ctggtggttt gccagtcttt atccgttatg
    14161 cagggcgtaa cctacgagca gtttgcatgg ttcgtgcgtc agagcgaaga gcagatttcg
    14221 atggtcattc ttgaagctaa tgcccatcaa ctgctgttac cgactgacga tgaagggcaa
    14281 aacaacgtta ccgaaaacta tttcctccac tgataactcc tttcgagcac gcagtcgctg
    14341 gtgcagtgac tgcgcactgc aaaattatct gctgttttta accttttctt aaagattatt
    14401 tcacttctct tgtgccgatt tggctttatc acatagagca aatacgcata acaatttgtt
    14461 aaataccgtt ttttaatccg agctatagtc tcaaaccctg gctaaagtta ttcttgcgat
    14521 gcttttatat agcgagcagt gctggccggg agagagttat cttttcttac accgcgccga
    14581 taaaaaatat gcacgtttat tgcatatctt ttagtatgac aacttttgtt cgtttgttaa
    14641 cgaactttca gaaggaaaga gatatgaccg ccttaaataa aaaatggctt tcgggtctgg
    14701 ttgcgggtgc tctgatggcc gtctctgtcg gcacgctcgc ggctgaacaa aaaacactcc
    14761 acatttataa ctggtctgat tatatcgccc ctgacacggt ggccaatttt gaaaaagaaa
    14821 ccggtattaa agtcgtctac gatgttttcg actctaacga agtactggaa ggcaaattaa
    14881 tggcgggtag caccggcttt gacttggtgg ttccatctgc cagctttctt gaacgccagt
    14941 tgactgcggg agttttccag ccgctggaca aaagcaaatt gccggagtgg aagaatctcg
    15001 acccggagct gctgaagctg gtcgccaaac acgatcccga caataaattt gctatgccct
    15061 atatgtgggc gacgaccggg attggctata acgttgataa agttaaagct gtgctgggcg
    15121 aaaacgcgcc cgtcgatagc tgggacttga tcctcaaacc tgaaaatctg gaaaaactga
    15181 aaagctgcgg tgtctctttc ctggatgcgc cagaagaagt ttttgctacc gtgttgaatt
    15241 atctcggcaa agatcccaac agcactaaag cggatgatta caccggaccg gcaaccgatc
    15301 tgctgttaaa gctgcgcccg aacattcgtt atttccattc atctcaatac attaacgacc
    15361 tggcaaacgg cgatatttgc gtcgctatcg gctgggcagg tgatgtctgg caggcgtcaa
    15421 accgcgcgaa ggaagcgaag aatggagtga atgtctcgtt ctcgattcca aaagaagggg
    15481 cgatggcgtt ctttgatgta ttcgccatgc ctgcggatgc caaaaacaaa gacgaagcct
    15541 atcagttcct gaattacctg ctgcgcccgg atgtagtagc gcatatttcc gaccatgtgt
    15601 tctatgccaa cgccaataaa gcagccacgc cgctggtgag tgcggaagtc cgtgagaacc
    15661 cgggtattta tcctccggcg gacgttcgtg cgaagctatt cactctgaaa gtacaggatc
    15721 cgaaaatcga ccgtgtgcgc acccgcgcgt ggaccaaagt gaagagcgga aaataatccg
    15781 cagccttaga tgccgggcgg gcgcaccaca cccgccggca attcgcacca tcatggtgcg
    15841 cttgcacaca ttcaatgccg gagagcagcc gtgaatgacg ctatccctcg cccgcaggcg
    15901 aaaacccgta aggcgctgac gccgctatta gaaatccgca acctcaccaa atcctacgat
    15961 ggtcagcatg cggtcgatga tgtcagcctg accatctaca aaggtgaaat cttcgcgctg
    16021 ctgggcgctt ccggctgtgg caagtccacg cagctgcgta tgctggcagg ttttgaacaa
    16081 ccttctgccg ggcagataat gctcgatggc gtcgatttgt cacaggtgcc gccttacctg
    16141 cgccccatca atatgatgtt tcagtcttac gcgctgtttc cgcatatgac cgtggaacag
    16201 aacatcgctt ttggcctgaa acaggacaaa ctaccgaaag cggaaattgc cagtcgggtc
    16261 catgagatgc tcggcctggt gcacatgcag gagttcgcca aacgcaaacc gcatcagctt
    16321 tccggtggtc agcgacagcg tgtggcgctg gcccgaagcc ttgccaagcg cccgaaacta
    16381 ttactgctcg acgagccgat gggcgcgctg gataaaaagc tgcgtgaccg gatgcagctt
    16441 gaagtggtgg atattctgga gcgtgtcggc gtgacctgtg tgatggtcac tcacgatcag
    16501 gaagaggcga tgacgatggc gggacgtatc gccattatga atcgcgggaa atttgtccag
    16561 attggcgagc cagaagagat ctacgaacat ccaaccaccc gctacagtgc tgaatttatc
    16621 ggttcggtta atgtctttga aggtgtactc aaagagcgtc atgaggatgg gcttgtgctt
    16681 tattcgcctg ggctggtgca tccactgaaa gtcgacgcgg atgcctcggt ggtcgataac
    16741 gtgccggtac atgtggcgct gcgcccggaa aaaatcatgc tttgcgaaga gccgcccgcc
    16801 aatggttgta acttcgcggt gggggaggtg atacacattg cctatctcgg cgatctttcg
    16861 gtgtatcacg ttcgtctgaa aagtgggcag atgattagcg cccagctaca aaacgcccat
    16921 cgtcatcgta aagggttacc gacctggggc gacgaagtgc gtttgtgctg ggaagtggac
    16981 agctgtgtgg tgctgacggt ttaaggagca aagatgaata cacttgaacc tgctgcccag
    17041 tcgaaaccgc cgggcggatt taagctgtgg ttgtcgcagc tgcaaatgaa gcatgggcgc
    17101 aaactggtca ttgcgttgcc atatatctgg ttgatcttgc tgtttctgct gccatttctg
    17161 attgtcttta aaataagcct ggcggagatg gcgcgcgcta ttccacctta taccgaactg
    17221 atggagtggg ctgacgggca actgtccatc actcttaatc tcggtaattt tctgcaactg
    17281 accgacgatc cgctctattt cgatgcttat ctccagtcgc tacaggtggc tgcgatttcg
    17341 acattttgct gtttactgat cggctatccg ctggcgtggg cggtggcgca cagtaagcct
    17401 tcgacccgta atattttatt actactggtg atcctgccgt cgtggacctc gtttctgatc
    17461 cgcgtttatg cctggatggg aatattaaaa aacaacggtg tgctgaataa ttttctgctg
    17521 tggctggggg ttatcgatca accgctgacc attcttcata ccaatctggc agtttatatt
    17581 ggcattgttt acgcctacgt gccgtttatg gtgctgccga tttataccgc gttgattcgt
    17641 attgattatt cgctagtgga agcagcgctg gatctcggtg cacgaccgct gaaaacgttc
    17701 tttactgtga tcgtgccgct gactaaaggt gggattattg ccggatcgat gctggtgttt
    17761 atcccggctg tgggcgagtt tgtgatcccg gaactgctcg gtggcccgga cagcatcatg
    17821 atcgggcgcg tgctatggca agagtttttc aataaccgcg actggccggt ggccgcggcg
    17881 gtagcgatca tcatgttgct gctgctaatt gtgccgataa tgtggttcca caaacaccag
    17941 caaaaaagcg tgggagaaca cggatgaata atttaccggt agttcgttcg ccctggcgga
    18001 ttgtgatttt gctgctgggc tttacctttc tctacgcgcc aatgctgatg ctggttatct
    18061 attcgtttaa cagctcgaag ctggtgacgg tgtgggccgg ctggtcaacg cgctggtatg
    18121 gtgagttatt gcgcgatgac gcgatgatga gtgcggttgg tttaagcctg acaattgctg
    18181 cctgtgcggc aacggcggcg gcgatcctcg ggactattgc ggcggtggtg ctggtgcgct
    18241 ttggcaggtt tcgcggatca aatggctttg cctttatgat cacagcgccg ctggtaatgc
    18301 cagatgtcat cacgggcttg tcgctgttgt tattattcgt cgcgcttgct catgccattg
    18361 gctggcctgc ggaccgcggt atgcttacca tctggctggc gcatgtcact ttctgtacgg
    18421 cttatgtggc ggtcgttatt tcgtcgcgtc tgcgggaact ggatcgctcg atagaagaag
    18481 cagcgatgga tctcggtgcg acgccgctga aagtgttttt cgtcattacg ctaccgatga
    18541 tcatgcctgc gatcatttct ggctggttac tggcttttac tttgtcgctt gatgatctgg
    18601 tgatcgccag ctttgtttcc gggccgggag ccaccacgtt accgatgctg gtcttttcca
    18661 gcgtgcggat gggggtgaat ccggaaatca acgcccttgc aacgttaatt ctcggtgcgg
    18721 tcggaattgt cggatttatc gcctggtatc tgatggctcg cgcagaaaaa cagcggatac
    18781 gcgatatcca gcgtgcaaga catggctgaa gacactaaaa tttgccaacc tggctacata
    18841 atgccgcgca tgccgcggca ttgttttcat ggaagacgaa acgttgggat tttttaagaa
    18901 aacatcttca tctcatgctc gcctgaatgt gcctgcgctg gtgcaggtag cggcgctcgc
    18961 cattattatg atccgtggcc tcgacgtgct gatgattttc aatacgctgg gcgtgcgcgg
    19021 tattggcgag ttcattcatc gcagcgtaca aacctggagc ttaacgctgg tatttttaag
    19081 cagtctggtg ctggttttta tcgagatctg gtgtgcgttt tcactggtga aagggcgtcg
    19141 ctgggcgcgc tggctatatc tgctgacaca aatcaccgcc gcaagttact tgtgggcggc
    19201 ttcgctgggg tatggttatc cggagctgtt cagcattccc ggtgaatcaa aacgtgaaat
    19261 cttccatagc ctgatgctgc agaagctgcc ggatatgctc atcctgatgc tgctgttcgt
    19321 tccctcgacc agtcggcggt tcttccagtt gcaataatgt gtataatcgt cgcccctgat
    19381 gatgtgaagg tcaatgtatg cagtgcgcac tttacgacgc gggtcgctgt cgttcctgtc
    19441 agtggataac gcagccgatt ccagagcaac tctccgctaa aaccgccgat cttaaaaatc
    19501 tgctcgccga ttttccggtt gaggaatggt gcgcgccggt gtcaggcccg gaacaagggt
    19561 ttcgtaataa agccaaaatg gtggtgagtg gtagcgttga aaaaccactg ctcggtatgc
    19621 tgcatcgcga tggcacgccg gaagaccttt gtgactgccc gctttatcct gcctcttttg
    19681 cgcccgtttt tgcggcgcta aaaccgttta tcgcccgtgc ggggttaacg ccctacaacg
    19741 tggcgcgtaa gcgtggcgaa ctgaaataca ttctgctgac tgaaagccag agcgatggcg
    19801 gcatgatgct gcgctttgta ctgcgttctg aaaccaaact ggcacaactg cgtaaggcgc
    19861 tgccgtggtt acaggaacaa ctaccgcaac tgaaagttat taccgtcaat attcagccgg
    19921 tacatatggc gattatggaa ggggagacgg agatctacct gactgaacaa caggcgctgg
    19981 cagagcgttt taatgacgta ccgctgtgga tccgtccgca aagtttcttc cagactaatc
    20041 cggcggtcgc cagccagctg tacgctaccg cgcgcgactg ggtacggcag ctgccagtta
    20101 aacatatgtg ggatctgttc tgcggtgtgg ggggctttgg tttacactgc gcgacgcctg
    20161 acatgcagtt aaccgggatc gaaattgcgc cagaggccat tgcctgtgca aagcagtcag
    20221 ccgctgaact gggcttaact cgtttacaat ttcaggcgct ggactccact cagtttgcca
    20281 ctgctcaggg ggaggtgccg gagctggtgc tggttaaccc gccgcgccgc ggcattggta
    20341 aaccgctgtg tgattatctc tcaacgatgg caccgcgttt tatcatctac tccagctgta
    20401 acgcccaaac tatggcgaaa gatatccgcg aactgcctgg gtttcgcatc gaacgggtac
    20461 agctttttga tatgttcccg cacaccgcgc actatgaagt gctgacgctg ctggtgaagc
    20521 aataaaaaag ccgcaggtgc ggcttcagat tgctgatcag gtgcgctttg ttcatgccgg
    20581 atgcggcgtg tacgccttat ccggcctaca aaatcatgct aaatcaatac attgcagagt
    20641 tgatgtgggc cagataagcg cagcgcatca ggcaatctta cttttgtcat cagtctcaat
    20701 tactgcggga accactggtc attgattttc tgatatgtac cgtcagcttt aattgctgcc
    20761 agcgcgttat tcagtttttc cagcagagct ttgttatccg gacgtacagc gatgcccaga
    20821 ccggtgccga agtattgcgg atcggtcact ttttcagtag caacgcccag ttgcggattg
    20881 gttttcagcc attcgtttac caccgctgtg tcaccaaata ccccatcaat acgaccattt
    20941 ttcagatcga taaaggcatt ctgataactg tcataggaga cagttttcac ttcggggtgc
    21001 tgatcctgaa tatatttctg gtgcgtggtg ccgttttcca tcccaatacg tttgcctttc
    21061 agatcggcaa acgttttgta ggtatctttt ttggcaatca cgacggctga gttttcatag
    21121 tagggcgtgg taaacgatac ctgcttgcta cgctcgggcg tgatatccat accggagatt
    21181 acggcgtcat attttctgaa tttcagtgac gggatcaggc tgtcgaacgc gtgattagta
    21241 aaagtacatt ctgcctgcat ttgtttgcac aaggcttttg ccagatcgat atcaaagccg
    21301 acaatctcat tattagcacc tatagattca aagggtggat aggtggctga aacgccaaaa
    21361 ttgattttct ctgcggcaga agcaccgaaa gtaaaggaag caagtaaagc ggcaagaact
    21421 aactttttca tgatggaact cccgtctgtc aatcttatga tttttggccg tgtctgcggc
    21481 atgggataac aatgccatca agtgaattta tatgcaataa atatgattaa ataatttaaa
    21541 tgaaataaaa aacgacggat aacttagtga gttgtccgtc ttcattataa gaatttatgc
    21601 actatgtagg ccggataagg cgtccacgcc gcatccggca caggcaccgt gctgatgtct
    21661 gatgcgacgc tggcgcgtct tatcagacct acaaaccccc cggcgaatgt acgcagctac
    21721 attaattccg ccgttcgaat gccagtgctt tgcgctcgat cagacgcatc atcagcgtca
    21781 gcaggccgtt gacgaccagg taaataatcc ctgccgcacc gaacaccatt acatcgtagg
    21841 tgcgtccgta caacaactgg ctgtatccca tcacttccat cagcgtaatg gtgtaagcca
    21901 gagaggtact tttgaacacc agcaccactt cgttggaata agaagagagc gagcgtttaa
    21961 aggcatacgg cagcaggatc gccagcgtat cttttttgct cattcccagg gcgctacagg
    22021 actgccactg accttctggg atcgcacgaa ttgcaccgta aaacagctgc gtggtatacg
    22081 ccgcactgtt cagcgataac gcaatcagcg cacataacca cggttctgac aacaaatgcc
    22141 acagtgccgg atactcctgc aaagtcggaa actggcccgg cccgtaataa atcaggaaga
    22201 tctgcaccag cagcggcgta ccggtaaaca gcgtgatata accccgcacc agccacacca
    22261 gcaccggcgt tttcagcgtc aggatgatgg taaaaatcaa tgccagaatc agtgccacaa
    22321 tcagcgaggc aacggttagc gtcaggctgg tgtgtagccc tttcatcagt tcgggtaaat
    22381 actcaaacat tagctgggcc tccgctcaaa acgtgtcgcg cgcaggtcaa tgcgtttgag
    22441 aatgtactga ctgagcaggg tgatcaccag gtaaatcgcc gccgccacaa tataccaggt
    22501 aaatggttcc tgggtacgag tagcgatgct ttttgtttgc agcattaaat cattcacact
    22561 aatcaaactg accagcgcgg tatctttcag cagcaccagc cactggttac cgaggccagg
    22621 cagcgcatga cgccacatct gcggcatcac cagacggaaa aagatagccg atttcgacag
    22681 ccccagcgcc tgaccagact cccactgacc caccggcacc gctttcaacg cgccccgaag
    22741 cgtttgcgag gcataggcgg catacagcag tgacagagcg atgacaccac aaaggaacgg
    22801 gctaacgtcg aagttctcaa tgtccatctg cactgggatc tgcacgaacc caagattgat
    22861 agtgaagcca tccgaaagcg tcagcagcag ctgcgaggag ccaaaataga taaacagcac
    22921 caccagaatt tctggcaggc cacgcagaat ggttaccagc gctgaacctg cccacgcgac
    22981 aggacgccat ttttccgact cccataccgc aaagaacatc gccagcgcca gcccgacaat
    23041 caatgcacaa acggcaaggc cgacggtcat cccggcggcg cttgctaaag gaaaaaattc
    23101 attcatcagg aattacttct ggaaccattt gttgtagatg gtttcgtaag tgccatcttt
    23161 cttcactttt tccagcgcag tgttgagttt ctgctgcagc tcagtgttgc cctgacgtac
    23221 cgcgatgccg aggccagtgc cgaagtaatc tttatcggtc actttgtcgc ccaccgccgc
    23281 cagtttcggg ttatctttca gccactcagt gaccactgcg gtgtcaccga agacgccgtc
    23341 gatacgcccg ttttgcagat ccagttttgc gttctggtag ctgtcatacg gaacggtagt
    23401 gatttccggg tgcttatcca taatgaattt ctggtgtgtc gtcccgttct gtacgccgac
    23461 ttttttgcct ttcagctgat caacactggt gtatttgcct tgctgaccca caaacagggc
    23521 agagttgtca tagtacgggg tggtaaacag cacctgcttt tcacgctccg gagtgatatc
    23581 catgcccgcc atcacggctt ctacgcgacg gaatttcagg cttgggatca ggctgtcaaa
    23641 cgcctggtta gagaaagtgc aggttgcatc aatctcttta cacagcgctt gtgccaggtc
    23701 gacgtcaaaa ccaacgatct ggttgtttgc atcaatcgat tcaaacggag gataggatgc
    23761 ttcggtagca aaacgaatgg tttcggcagc tgtggcggaa agactaaaac ctgcaattaa
    23821 cgcggcaatc agaacttttt tcattgttgt tatcccgaat cttagtgaga gagatagttt
    23881 ttaaatgctt cggtttgcgg ctcggtaaag cagctcgcgt cgccttgttc tacgatatga
    23941 ccattttcca tatacaccac tcggctggcg gttttacgcg ccacttcaac ttcgtgggtg
    24001 acgatcacct gggtaatatt cgtttctgcc agctcacgaa tgatgctgac gatttgtgcc
    24061 gtaatttccg ggtccagtgc ggcggtcggt tcatcgaaca gcagtacctg cggttccatc
    24121 atcaacgcac gggcaatagc aacacgctgc tgctgaccac cagaaagatg cagcgggtaa
    24181 cgatcgctat aaggtttgag acgcagacgt tccagcagtt tttctgcacg ggccagcgcc
    24241 tgatctttac tcaaccccag tacacggcag ggcgcttcaa tcaggttttg ctgcacggtc
    24301 agatgcggcc acaggttgta ttgctgaaac accatgccaa cgttacgacg caaatcgcga
    24361 atcgctttgt cagagggggt tttggtgaaa tcgaaatggt tgcctgcaat gttgagcgta
    24421 ccggagcgcg gcatctcaag cagattgagt acacgcagca gcgagctttt acccgcgccg
    24481 ctggggccaa gtaacaccag cgtttcgccc tgtgggcaat ccagcgtgat atcgaacagc
    24541 gcctgatgcg cgccgtagaa gcaattaatg ccgtttaatt gaatactcat tgacactcgt
    24601 atactggcag tctgatagct attgaggtcg aagatagtac ctttgacaga ataattatgc
    24661 aatatttctg ctttaaaagt taaaagcaaa gcgcattatt caataaacat agcacaaaat
    24721 aacgggggcg gtggtcggcg agcataaatg tcggcattcc tcacgaaatg ccggacaatt
    24781 tacggggttt attggttgat caaggcgtta gcgattctcg atggactgac ggagcgtacc
    24841 cgccgtggca tgaacgctgc cgcctaagta gcgtacatcg tcgatcaccc aacactggcc
    24901 ttcctgaatc attaacactt catcctgcca gctctgatca ccctgtttta gatccacacg
    24961 cagaggaata tttcgcgcat cacgattcgg gattgttgag gcactggcaa cacgggcgct
    25021 ctctggcaag gttgtgcgac tggagaatgg atcgttggtc agtagttccc gatggttatt
    25081 atcccgggag gcatcgctaa gcagtgtcgc cagtttgtcg ctcagataag ggcgcaaggc
    25141 ggtgatgtcg ttgctgcggt gcaaaatgcg gtagtcataa aattgctggg ccacgttacc
    25201 cgggcctcct tcaacgcaag gaccactgcg tgtgccgtta tctttataag ctggagtgac
    25261 tgtggtgcag gcactgagga gcagtgcgca ggggataagc attgtcaatt tgctgtagcg
    25321 cataatgatt tccttataag cgatcgctct gaaagcgttc tacgataata atgatatcct
    25381 ttcaataata gcgtatcagt ctgataatgc ttttgagatc gaaggcttag caaacaagga
    25441 gatcgatcat gcaattttct acaaccccaa ctctggaagg ccagaccatc gttgaatatt
    25501 gcggtgtggt gaccggcgaa gcgattttag gtgccaatat tttccgtgat ttctttgccg
    25561 gtatccgcga tatcgttggc ggacgttccg gtgcgtatga aaaagaactg cgtaaagcac
    25621 gggagatcgc ctttgaggaa ttaggctccc aggcgcgggc gctgggggcc gatgccgtcg
    25681 tcggtattga tatcgactac gaaacggtcg ggcaaaacgg cagtatgctg atggttagcg
    25741 tcagcggtac ggcggtgaaa acgcgtcgat gagaagagtc ttctggctgg tcgctgccgc
    25801 tctgttattg gcagggtgtg caggcgaaaa aggcattgtc gagaaagagg gatatcagct
    25861 tgatacccga cgccaggcgc aggcggcgta tccgcgcatt aaagtgctgg tgatccacta
    25921 caccgcagat gattttgata gctcgctggc gacactgacc gataagcagg tcagctcgca
    25981 ttatctggtc cctgcggtac caccgcgata caacggtaaa ccgcgcatct ggcaactggt
    26041 gccggaacaa gaactggcct ggcatgcggg gattagcgcc tggcgcgggg caacgcgcct
    26101 taacgacacc tctattggca ttgagctgga aaaccgtggc tggcaaaaat ctgccggagt
    26161 gaaatatttt gccccgtttg aaccggcaca gattcaggcg cttattccac tggcgaaaga
    26221 tattattgcc cgttatcaca tcaagccgga aaacgtagtg gcacatgcgg atatcgcacc
    26281 gcagcgcaaa gacgatccgg ggccattatt tccctggcag caactggcgc agcaggggat
    26341 tggtgcctgg ccggatgcgc agcgggttaa cttttacctt gccgggcgcg cgccgcacac
    26401 accggtagat accgcgtcat tgctggagct tttggcgcgc tacggttatg acgttaaacc
    26461 tgatatgaca ccgcgcgagc agcggcgcgt gattatggca ttccagatgc atttccgccc
    26521 gacgttatat aacggcgaag cggatgcaga aactcaggcg attgccgaag cattgctgga
    26581 gaaatacggg caggattagc gcggcagttt tccgtggtcg cgtagccagg cggcagtttt
    26641 ctcgatacct tcatccaggg tgatgaccgg ctgataacct aactcttcct gcgcacgcgt
    26701 aatatccagc gtaaagtcaa aattcaactt ggagacgccg tagtgggtca gcggcggctc
    26761 ttttgctgac ttgcggaaac gctccatgct gcgggcgatc atatccagca tcgggtaggg
    26821 gacggaacga atacgacagt caatattcaa ctcgtcgatc agcttctgca cgatgctgca
    26881 cagtgtgcga tgctcgccgt tggtgatgtt gtacacacgc ccggaaggta gcttatcgca
    26941 ggcttcctgg cttgccagcc acattgcgtg cacggcattt tcatagtagg tcatatcgac
    27001 cagcgcactg ccgccatgcg gtaacagaat actgccgtag tggtgcatca tatgcgccag
    27061 acggggaata aagactttat cgtgcggtcc gaacagactt tgtgggcgca gaatagtaaa
    27121 gcgcgtttgt ggattcgcct gcgaaaacat attgatcact tcttcgctgg ctgctttgct
    27181 gcgggcaaac tcgttggcga agcggtgagg gcgaaaatct tctttaatat cgcgatggtg
    27241 gtgataatcg aagtacaggg agggggaaga gatatgaata aagttacgca caccccaggc
    27301 gacagcccat tcacccaggc ggcgagtggc gcgaacgtta gccagatcga aagcctgttg
    27361 tgtcccccag ggtgaggtaa agctggagca gtgccacagc gtatcaatgc ccgcgagcat
    27421 cactttagct tgtgatgaaa ccagctcggt cagatccgcc ggaacaaact ctgcgcccat
    27481 tttttccagc aatttgccca ttgcctcgtt gcgaccggtc gctcgcacgc tgatgccttt
    27541 ctggcataaa aactctaccg cgtttcgacc taagccgctg gtggcgccgg taaccagtac
    27601 cttcatatca atccactgtt gttgagaaaa taacgtgcgc attcttccgt gatttccccc
    27661 atgatgcaat gggaaacatg aaagaataac gcaggttttg tcgattaatc tgtgctttgt
    27721 tctgccagtc tggcgatttg ttttgccatt ccgcgaaaaa taaacagatg cgcggggatc
    27781 atcaataacc agtaaaacag ccccggcata ccgtgcggat gccagaaagc gcggacatcg
    27841 atagtacgat agtcgccttt atcttccagg ctaaaacaca gtcgtcccag ccccggcgct
    27901 ttcatgccaa ataacaacgt aagttgtttt tccggttcaa cgacaatcac tttccagcta
    27961 tctaccgcat cgccagtctg taaatattcg cgctccgggc ggcctttcgc cagcttatga
    28021 ccgatcgcgc ggtccatcaa cgcccgtgtc tgccacaaaa tattgccaaa gaaataacgc
    28081 tctttaccgc cgatttggtt cactacctgc cataaagcag caaggctggc ggacgtttta
    28141 acggtaaacc ccgcctgttt ggcaaaataa ccgtactccg gtcgccagcg ggcaaaggcc
    28201 tgagcgtcgt agccccagtc gctggagttg accagttttt cctcctcttt caacgtgcta
    28261 cgtactgcgt catcgaaagc gatcagccgt tgtgggatga gtgcacgtag cgcggtatca
    28321 tccgccagca gatcgtgttt cagcccctga atcaacgccc tggcggtggt gggcggtacg
    28381 gaagtaatca cattgagaaa ccacaccgaa atccagcggg tggggagggg gatggggatc
    28441 aaccagcggc gcttgccgct caccgccata aaatgttcaa actgttgctg ataactgagc
    28501 acctctggtc cggcggcttc gaagatgcgg tgttcgctgg ccggatgatc taacaacgcc
    28561 accagatagt gcagcaagtt ttccagcgcg atgggcgtgg tgcgtgaacg tacccagcgt
    28621 ggcggcgtta acactggcag gttgtagacc atatcgcgca tgacttcgaa cgccgctgaa
    28681 cctgcgccaa cgataattcc ggctcgaagt tcggtcacag gtacattcgc ttcacgaaga
    28741 atgtccgccg tagcctgacg agcacgcaga tgatccgact gctcatgtgg cggggcctgc
    28801 aacgaactga gaaagattaa ttgcttaact ggtacttcac gtagcgcatc gcggacgttg
    28861 agagccacct ggcgctcctg agcgataaaa tcgccgcctt cgcccatgct gtgcaccaga
    28921 aaatagacgg tatcgatatc ctgcaacagg gccggaaggt tatccggcca gctgagatcg
    28981 actttatggc aactgacgtt tgccagttgc agctttgcaa gcctgtcgac atgacgtgcc
    29041 gccgccagga tctgatgccc ttgctggctg agtgtgcgca ccagatgctg accaatgtag
    29101 ccactggcac cgagaactaa aatgcgttgc ggcacgtctc tctccttaac gcgccaggaa
    29161 tgcgcgccag tgggcggcga cttccgccag ttgttcgcgc gagacgtcaa gatgcgtcac
    29221 caggcggaca atcggcgagg cgttaatcag cacgtttctc actttcatgt attcgcctaa
    29281 cgcggcagca ttttcttccc cgacgcgaac aaacagcata ttagtgtcct gacgcatcac
    29341 atccgcgcct gcttcacgca gttgctccgc catccaggcg gcgttgtcgt gatcttcctg
    29401 caaccgtgcg acgttatttt tcagggcata catcccggcg gcagccagaa tcccggactg
    29461 acgcatcccg ccaccggcca ttttccgcca gcggatggca cgtttaatgt aatcacgatt
    29521 accgacgagt aatgaaccga caggcgtccc aagacctttc gacaggcaaa tggtgaacga
    29581 atcacaatat tgcgtgatct ctttcagttc gcagccgtaa gccaccacgg cattaaagat
    29641 gcgcgcaccg tcaacatgca gcgccagatt gcgctcgcgg gtaaattccc atgcttcttt
    29701 caggtattca cgcggcagca ctttgccgtt gtgggtgttt tccagactga gtaatttggt
    29761 gcgggcgaaa tggatatcgt cgggtttgat tttcatcgcc actttatcca gcggtagcgt
    29821 gccgtcggca gccgcgtcga tgggttgcgg ctgaatactg cccagcaccg ctgcgccacc
    29881 ggcttcaaac agatagttat gcgcggcctg accgacaata tactcttcgc cacgttcgca
    29941 gtgactgagc agagcgacca ggttggcctg agtgccggta ggcagaaaaa tggcggcttc
    30001 tttaccggaa agctctgctg catagtcctg cagagcatta acggtagggt cgtctccgta
    30061 aacgtcgtcc ccaaccgggg cggccatcat cgcttcgagc atggcgcggc tcggtcgggt
    30121 aacggtatca ctgcgtaaat caatcatggc atgtccttat tatgacggga aatgccaccc
    30181 tttttacctt agccagttcg ttttcgccag ttcgatcact tcatcgccgc gtccgctgat
    30241 gattgcgcgc aacatataca agctaaatcc tttggcctgt tcgagtttga tctgcggtgg
    30301 aatggctaac tcttctttgg cgaccaccac atccaccagc accggaccgt cgatggagaa
    30361 ggcgcgttgc agggcttcat caacttcaga cgctttttct acacggatac ccgtaatgcc
    30421 gcacgcttcg gcaatgcggg caaagtttgt gtcgtgtagt tcggtgccgt cagtcaaata
    30481 gccaccagct ttcatctcca tcgccacaaa gcccagcacg ctgttgttaa agacgacaat
    30541 tttcactggc agtttcatct gcactactga gaggaaatcg cccatcaaca tgctaaaacc
    30601 gccatcgccg cacatggcga ccacctgacg ttctggctct gtcgcctgcg cacccagcgc
    30661 ctgcggcatg gcgttagcca tcgaaccgtg gttaaacgaa cctaacaggc gacgcttgcc
    30721 gttcattttt agataacgtg ccgcccacac cgttggcgta ccaacgtcac aggtgaaaat
    30781 agcgtcatcg gcggcaaaat gactaatttg ctgcgccaga tattgcgggt gaatggcttt
    30841 ctcgctcggt ttagctaaat cgtccagccc tttgcgggcg tcgcggtaat cttccagcgc
    30901 tttatccaga aacttgcgat cggctttttc ttccaccaat ggaagcaatg cacgcagagt
    30961 cgacttgata tcgccgacca gtgccatatc caccttgctg tgagcgccga tgctggctgg
    31021 gttgatatca atctgaatga ttttggcatc ggtcgggtag aaggcgcggt agggaaattg
    31081 cgtgccgagt agcactaacg tgtcggcgtt catcatggta tggaaacctg acgagaagcc
    31141 gattaacccg gtcattccaa catcatacgg attatcgtat tcgacatgtt ctttaccgcg
    31201 cagggcatga acaataggcg ctttaatttt cccggcaaac tcaactaact ctttatgcgc
    31261 ccccgcgcag ccgctgccac acatcagggc gatattgctg gaataacgca gcagttgcgc
    31321 cagtttgcgt aactcttctt cttccggcgt cacgactggt tgtggcgcat gataccagtg
    31381 cgtggttgcc ccttctggcg caggttttaa cgccacgtcg cctggtaaca cgacaaccga
    31441 aacgccacgg ttaagcaccg ctttgcgcat ggcaatcgcc agtacttgtg ggatctgctc
    31501 cgggctggaa accagctcgc aatagtgact acattcgcgg aatagctctt gtgggtgggt
    31561 ttcctggaaa tagccgctgc caatttcgct ggagggaata tgagcggcaa tcgccagtac
    31621 cggaacgtga ttgcggtggc aatcaaacag gccgttgatt aagtgcaggt tgccggggcc
    31681 gcacgatccg gcgcagaccg ccagttctcc gctaagttgt gcttcagcgc cagcggcaaa
    31741 ggccgccact tcttcgtggc gggtggacat ccactcgatg gtgcccatgc gattaagact
    31801 gtcactaaga ccattcagag agtcgcctgt gactccccag atgcgtttca cccctgccga
    31861 ttcgagtgtt ttggcgatat aagctgcaac cgtttgtttc atggttctcc atctcctgaa
    31921 tgtgataacg gtaacaagtt tagttcatct gacggagggg gaagggatgg gagagaaagg
    31981 aggcactaac ggttaaatag cccgatgaaa ggaatatcat cgggcataag gcgattatgc
    32041 gagaaccaaa tccccctgcg gatggcagga gcaggccagt acgtaacctt cagcgatttc
    32101 ggcgtcggtc agcgtcattg tactgctcac cgtatattca ccggaaacca cttttgtctt
    32161 acagcagccg caaacacccg cacggcaggc agcgacaacc ggaacgttat tgctttccag
    32221 cgcctccagt agtgtggtgc caaccggggc gtaaaattct cgtgccggtt gcagtttggt
    32281 gaatttcaga ccgctggtcg ccgcttttgc tactggggtg aagaatttct ctttaaagaa
    32341 acgcgtcacg ccgagcgctt tcacttcctg ctctacccaa tccatatacg gagccgggcc
    32401 gcaggtcatc acggtacgtg aagctaagtc aggtacacct gccagcagtt ctcgagtgag
    32461 acgaccagcg ataaagcctt cggtaacgtt attttctgcc accagcgtta ccggatagtt
    32521 acgccactca tcggcgaaaa taacatcctg cggcgtatgc acgttgtaga tcacccgcac
    32581 atcggcctgt ggacggttct tcgcaagcca gcgacgcatc gacataatcg gcgtgacgcc
    32641 gcagcctgcc gccagcaaca ggaatttatc ttctgcttta tcgtcgcagg taaattcccc
    32701 catcgcgtcc gaaagccaga gataatcacc gcgttttaca tcgcgcgtca gccactggga
    32761 gccgacaccg tcatcaatcc gccgcacggt cagggtgata tattcactca cgcctggcgt
    32821 ggaggaaatg gtgtaagcac gcagcgtttc cgctgagttt cgcacgctga ccagtgcata
    32881 ttgcccggcg cgatatgggt agtaatcgtg gcaaatcagg gaaatcgtcc acacatccgg
    32941 cgtttcttgc gtaatgtgat gaacctgcat ccgccacggg cattgattcg ttggcatcgt
    33001 catcgacaaa ctccttacgc gctcaacagt tgcttcatgt cttcttcaac agtggtgata
    33061 gaacgcaggc cgaatttctc gttcagcacc gccagcaggt ctggtgtcag gaaaccaggt
    33121 gcagtcgggc cggtgacgat atttttcacg cccagagaaa gcagcgtcag cagaatgacg
    33181 atcgctttct gttcaaacca ggagagcacc agcgacagcg gcagatcgtt cacaccacag
    33241 cccagtttct ctgccagagt gacagccaga ataatcgctg agtaagcatc gttacattga
    33301 cctgcatcta ccagacgcgg cagaccttcg atatcgccaa actcaagttt gttaaagcga
    33361 tatttaccac aggcgagggt caggatcagg cagtcatccg gcacgatggt ggcgaaatcg
    33421 gtgaagtagt ggcgctcgcc gcgtgcgccg tcacagccac caagcaggaa gatatgacgc
    33481 agtttttcac ggctcaccag atcaatcagc gtatcagcag cgccaagcag cgtctggcga
    33541 ccaaaaccca cggtgataag gtgcggaatt tcgctgtacg ggaagcctgc catctgttgc
    33601 gcctgggtga taaccgcaga gaaatcatca ccgtccagat gacgcacgcc aggccagcca
    33661 acaatgctgc gggtccagat acgatcgtca taagcgctta cggttgggtc gatgatgcag
    33721 ttcgaggtca tcacgatggg gccagggaaa cgagcgaact ccacttgctg attctgccag
    33781 ccgctgccgt agttaccgac cagatgcttg aatttacgca gctccgggta gccatgcgca
    33841 ggcagcattt cgccgtgggt gtagacatta acgcccgtgc cttcggtctg ttccagcagg
    33901 ttgtagagat ctttgagatc gtgaccggaa atcagaatgc atttacccgc cgtcgctttg
    33961 acgttgacct gggttggcgt cgggtgaccg tatttaccgg tttcgcctgc atccagaatg
    34021 ctcatcactt tgaagttcat ctggccgatt tccattgaac actcaagaag cgcgttcata
    34081 tcggcaggcc aggtccccag ccacgccatg attttatggt actgggcata aatatcgttg
    34141 tcgtattgac cgagaacatg cgcgtgttcc atataggccg ccgcaccttt caggccatac
    34201 aggcacagca gacgcaggcc gagaatgttt tcgccaatcg ccgctttatc tttgttaggg
    34261 gtaaattctg ctgcctgacg ttgcagctcg ccgagatcat cgctcaccag ttgcaggtca
    34321 gccatcgggt tatcgacgcg cgcgttggca tctacagcca ggcattgtgc tttcagcgcc
    34381 tcgcgcaagg caatcgcttc acgagcgtag ccgacaatac gcggagaatc gaagttaacg
    34441 ttggtcaggg ttgagaaaaa ggcacgtggc gcgaagctgt caacatcgtg gttgatgatg
    34501 ccgtattcac gcgcttttac cgcccaggca gaaagccctt gcagcgccgc gatgagtaaa
    34561 tcctgaaggt cagaagtttc cgccgtttta ccacacatcc cctgcgcgta tgagcagccg
    34621 tttcctgccg gagtacggat agtttgttca cattgcacac aaaacatgat cacacctttt
    34681 aaagttatat ttaatataca tgtttaaggt taagacgctt aacgcgggga taaaagggat
    34741 ttttcatgca actttaaggg agattgattt agcgcaattt tggcggcagg gatctaccgc
    34801 cagagaggta ttacgcagag aaaaaggcga tgaggatcgg cactaacagg ctaagaataa
    34861 aaccgtgaac aattgccgcc gggaccatat ccagcccgcc agtacgttga agaacgggca
    34921 gggtgaaatc cattgatgtg gcaccgcata agcccagtgc agtagagcgg ctgcggcgaa
    34981 tcagcccagg gatcaacata atagcaatca gttcacgggc cagatcatta aaaaacgccg
    35041 cgctcccgat taccggacca aaagattcgg tcaataaaat accggaaaga gaataccagc
    35101 cgaaaccgga ggccattgcc agcgcggtat tgatggggag atcaagaata aaggcgttaa
    35161 ttaaaccacc aattaatgaa ctgacaacca ccaccacggc gacaatcatt ccccggcgat
    35221 taaggacaat ctgctttaag gtcatgccat tattgcgcaa ctgaatacca acgaggaaaa
    35281 gtagcaaaat taacgtgtat tcactggctt cggtcgcgtg ttgtaagaaa gccagtccac
    35341 tcagaccaat ggcaaaacca atcactacta cgccgcacag ttttagcgac tccagcgcca
    35401 tcgcaatacg cgacgggagt ttttcttgct gatggtggtt gcgccacggc aggcctcgct
    35461 ccagccacat cagggcggca atattacaca gtaaaataac ggtaatactg acggcagaat
    35521 aatgcagaat cgccaacagg ttactggcga ggttatcgag aaacgccaga ctgataccca
    35581 taaaaaagag aataaggtaa accatccagc ttaatagctg attaataact tttaacgcag
    35641 cttgttggcg aagcggaatg aggtaaccca caatcagggg aaccagaatg attaacagcc
    35701 cagaaaacat gaaaacccag tccttgcaaa gatgaagtcg aaatgcgcga tgacacacta
    35761 ctgaaagcgg aaggacgagt aaagttgcaa ttaaaaggaa atgttatgca taaggagcag
    35821 tagagtattc gttttcattt aaagatattc ttgcgcttta attacaaact gcaccgatgt
    35881 tggtggcgtc aaaatcgccg aggcgttccc tgaaggccgg ggcagcccac atggatgtgg
    35941 gctgagggcg cgttttacag ggatgttacc tcgcgcccga cccggtagcc gtaagggata
    36001 agtcgagggc accgcgcagc ggcgattttg ttcgccagag cccggggggg cagggggcgg
    36061 cggcgattgg ccgccccctg cgcgctcctt gcgccagtgg caatatgtgg cttagctcat
    36121 gaaaggagcg caacaagatg atgaatcaac atataacaac atcttaaaaa aagcctgaca
    36181 ttacgccagg ccttctgagt taattaatca cgcttttcca gcagggtccg gtaaatcaga
    36241 ccaccgataa tgccgccgac aattggcacc acccagaaga accacagttg ttctaatgcc
    36301 cagccgccct ggaagatagc aaccgcggtg ctgcgcgccg ggttaacaga agtgttagtc
    36361 accggaatac taattaagtg aatcagggtt aaggccagac caatagcgat cggcgcaaaa
    36421 cctgccggcg cgaatttggc ggttgcgccg tggatcacca acaggaaacc tgcactcaat
    36481 accagttcaa ctaccagcgc ggaaagcatg gaataaccgc ctggtgaatg ctcgccataa
    36541 ccgttagaag caaaaccgct ggctgccgcg tcaaaacccg ttttaccact ggcaattaaa
    36601 tacagcagcg ccgctgcaac aataccgccg acaacctggg caattacgta gccaacgact
    36661 tcttttgccg gaaaacgtcc gccagcccat aaaccaatag tgaccgccgg gttaaaatga
    36721 ccaccagaaa tatgaccaac agcaaaggcc atcgtcagaa cggtcagacc gaacgccaac
    36781 gccacgccgg caaaaccaat gcctaattcc gggaagcctg cggccagtac agcactacca
    36841 cagccaccaa aaacaagcca gaaagtacca aaacattcag ctgctaattt tctgaacata
    36901 tccacctcaa ttaaaaattg accctgtgaa aaatatggtc gttttatagg gtcgtcgtaa
    36961 aaaaatgacg acggaaataa tgcgcggcta ttttaaaaac gaaggcgagt cattcaccag
    37021 ataaataaat ccagtaaatt tgatttaggg caacagcggg ttgccccata tagtcatttg
    37081 tctgattgac agtgtagtgc acgcaaaaga tttaatcctt taggcgtaat aaaaaataat
    37141 atatcatgct aattatttga ttttgttgtt tttgcagact tatcagcaag agggagtata
    37201 acgcgattat tcgctcattt ttcagacatt tgccatgctt aaatgtgatg tcatcacgta
    37261 ttagcaaggc ctttcccgtt atactgccag cgtaaaggat aagtcacata tttctggagg
    37321 ggatatgatt cttgagcgcg ttgaaattgt gggttttcgc ggtatcaacc gtttgtcgtt
    37381 gatgctggaa caaaacaacg tcctgattgg ggagaacgcg tggggtaaat ccagcttgct
    37441 ggacgcctta accctgctgc tatcgccaga atcagatctc taccattttg agcgcgacga
    37501 tttctggttc ccgccgggag atatcaacgg gcgagaacat catctgcata ttattttgac
    37561 cttccgcgaa tcgctgccag gccgacatcg ggttcgccgt tatcggccgc tggaagcgtg
    37621 ctggacgcca tgcaccgatg gctatcaccg tattttttat cgtctggaag gggagagtgc
    37681 ggaagacggc agcgtgatga cactgcgcag ttttctcgat aaagacggac atccgattga
    37741 tgtcgaggat attaacgatc aggcacgcca tctggtgcgt ttaatgccgg tgctgcgctt
    37801 gcgtgatgcc cgttttatgc gccgtattcg taacggcacg gtgccaaatg tccctaatgt
    37861 ggaagtcacc gcgcgccagc tcgatttcct cgcccgtgag ttatcctcac atccgcaaaa
    37921 tctctctgat gggcagattc gtcagggact ttccgcaatg gtacagctgc ttgagcatta
    37981 tttctctgag cagggggccg gacaggcgcg atatcgttta atgcggcggc gggccagcaa
    38041 tgagcaacga agctggcgct atctggacat catcaaccgg atgattgacc gacctggagg
    38101 gcgctcgtat cgggttattt tgctcggcct gtttgctact ttattgcagg caaaaggcac
    38161 attgagactg gataaagacg cgcgtccatt gttgctgatc gaagatccag aaacccgttt
    38221 acaccccatt atgctttcag ttgcctggca tctgttgaat cttctgccat tgcagcgcat
    38281 tgccaccacc aactcgggtg agttgctttc gttaacgccg gtagagcatg tttgccgact
    38341 ggtacgtgag tcctcgcgcg ttgccgcctg gcgtctgggg ccgagtggct tgagtaccga
    38401 agatagccga cgcatatcct ttcacattcg ttttaaccgt ccgtcatcgc tgtttgcacg
    38461 ctgctggttg ctggtggaag gggaaacgga aacctgggtt atcaatgaac tggcgcgtca
    38521 gtgcggacat cattttgatg ccgaagggat caaggtcatt gagtttgccc agtccgggct
    38581 aaagccactg gttaaatttg cccgccgaat ggggattgaa tggcatgtac tggtcgatgg
    38641 cgatgaagca gggaagaaat atgccgctac ggtacgcagc ctgttgaata acgatcggga
    38701 agccgaacga gaacatttaa cggcgttacc ggcgctggat atggaacatt ttatgtatcg
    38761 ccagggattt tccgatgtgt tccaccgcgt ggcgcaaatc ccggaaaatg taccgatgaa
    38821 tctacgcaaa attatctcga aagcgatcca tcgctcttcc aaacccgatc ttgccattga
    38881 agtggcaata gaggcaggac gtcgtggtgt ggactccgta ccgacgctgc tgaaaaaaat
    38941 gttctcacgc gtgctgtggc tggcgcgcgg tcgcgcggat taaccgcgaa acatcgtggc
    39001 catttgtggc tgaatagcgt cgagcatctc atagcgccga cggtattcag cccgtttttt
    39061 actggcgatt tcggcaatct cttttcgtgc tatctgtgct ggaaggcggt aatggcgttc
    39121 agcatcacat acgccgccaa ccgattccca gaaagcgttg taatcagcgt ggatcttgcc
    39181 ttctttatcg cgataacgca ggctgcggta aatatgcgtt tcattgctga cggcaataat
    39241 ctgctctacc tgcaaacgtt gggcaaacag acaggccgct tccatcacga ggcgtttggg
    39301 aaatagcccg tggcaggctt tcgtcgcatt ctggatttcc tgatgtggaa tttcccattt
    39361 tgcgccttgc agtccgccaa taaacatcgt tcttttcccc tgatattcac acagggtaaa
    39421 cgtgatctct gccagaggaa taccttcgct gttgcgaaac aggattgtgc tgtcaccttc
    39481 tttatccatt gagatcatca tggtcagctt aagcgtgaac tgctcgccgt ttttgccttc
    39541 cagcttcgcc agttgcagcc cgggggtatt caaatataag ctgaattctt ccgccgacat
    39601 acatccgcgg agtaacgcat aatggtaacg taacgcctcc agcaattgct tacggctaag
    39661 attcgccgca aggtaagggc gatgcagacg cacaggcagt cgcggctggc gcgttaacaa
    39721 cacattgaga ttaggccagt gggaaagttc gttcatccac tcaacgctta aacgcggcat
    39781 aatcaacgag cgcagcaaaa atttctggcg aaaactacgg cgatgccaga atttacccgg
    39841 ccgacactgt ccacgtgcca gactaagaaa aagtgacagg ctgctgagag attcagatgg
    39901 cgtaaaggtc cgttcagtta gctgcgacat attcatgaaa tcattggtta tacatgacgt
    39961 cgatttcacc attgcgtatc ttaaccaaac atcaatagtg tgattactaa cgtaaatttt
    40021 agggttttgt tgatatttcg ttgaagttaa tgacccggat tggcatatgg agtattcaga
    40081 atatttatga aaaagcggaa aaccgtgaag aagcgttacg ttattgcgct ggtgatagtc
    40141 atcgccggac tgattacgtt atggagaatt cttaacgcac ccgtgccgac ttatcagaca
    40201 ctgattgtgc gccccggtga tttacagcaa agcgtgctgg cgaccggaaa gctggacgcg
    40261 ctgcgtaagg ttgatgtggg cgcgcaggtc agcggtcagt tgaaaactct gtcggtggcg
    40321 attggcgata aagtaaaaaa agaccagctt ttaggggtta ttgatcctga acaggctgaa
    40381 aaccagatta aggaggtcga agcaacgctg atggagctac gtgcgcagcg gcagcaggcg
    40441 gaagcggagc tgaaactggc gcgggtgacg tattcccgtc agcaacgtct ggcacaaacg
    40501 caggcggttt cacagcagga tctcgacacc gccgcgacgg agatggctgt gaaacaggcg
    40561 caaattggca ccattgacgc ggaaatcaag cgcaatcagg cttctctcga tacggctaaa
    40621 accaatctcg attacactcg catcgttgcc ccgatggccg gggaagtcac gcaaatcacc
    40681 actctgcaag gccagacggt gattgccgca caacaagcac cgaacattct gacgctggca
    40741 gatatgagca ccatgctggt aaaagcgcag gtttctgaag cggatgtaat ccacctgaag
    40801 ccggggcaaa aagcttggtt tacggtgctt ggcgatccac tgacgcgcta cgaggggcaa
    40861 atcaaggatg tactaccgac gccggaaaag gttaacgacg ctattttcta ttacgcccgt
    40921 tttgaagtcc ccaaccccaa tggtttgctg cggctggata tgactgcgca agtgcatatt
    40981 cagctcaccg atgtgaaaaa tgtgctgacg atccctctgt cggcgttagg cgatccggtt
    41041 ggcgataatc gttataaagt caaattgttg cgtaatggtg aaacacgcga gcgtgaagtg
    41101 acgattggcg cacgtaacga taccgatgtt gagattgtca aagggctgga agcgggcgat
    41161 gaagtggtga ttggtgaggc caaaccagga gctgcacaat gacgcctttg ctcgaattaa
    41221 aggatattcg tcgcagctat cctgccggtg atgagcaggt tgaggtgctg aagggcatca
    41281 ccctcgatat ttatgccggt gagatggtag cgattgttgg cgcttcaggt tccggtaaat
    41341 cgaccctgat gaatattctc ggctgtctgg ataaggccac cagcggcacc tatcgcgtcg
    41401 ccggtcagga tgttgccaca ctggacgccg atgcgctggc gcaactgcgc cgcgagcatt
    41461 tcggctttat tttccagcgt taccatttac tttcgcattt aaccgccgag cagaacgttg
    41521 aagtacccgc cgtctatgcc ggtcttgagc ggaaacagcg gctgcttcgc gcccaggagt
    41581 tactgcaacg actggggctg gaagaccgta cagagtatta tccggcacag ctttcgggtg
    41641 gtcagcaaca gcgcgtcagc atcgcgcggg cattgatgaa cggcggtcag gtaattcttg
    41701 ccgatgaacc aaccggcgca ctggacagcc attctggcga agaggtgatg gcgatcctgc
    41761 atcagctgcg cgatcgcggg catatggtga ttatcgtcac ccacgatccg caggtcgctg
    41821 ctcaggccga gcgggtgatc gaaattcgcg acggcgaaat tgtgcgcaat cctcccgcca
    41881 ttgaaaaagt gaatgttgct ggcgggacgg agcctgttgt caacacggtg tctggctggc
    41941 ggcagtttgt cagcggtttt aacgaggcgc tgacgatggc atggcgggcg ctggcagcga
    42001 ataaaatgcg tactttactg accatgctgg ggattattat cggtattgcg tcggtggttt
    42061 ccattgtcgt ggtgggtgac gccgccaaac aaatggtgct ggcggatatt cgttctattg
    42121 gtacgaatac tattgatgtc tatcccggga aagattttgg cgatgacgat ccgcaatatc
    42181 agcaggcgct gaagtacgac gacttaatcg ccatccaaaa acaaccgtgg gtcgcctcag
    42241 ccacacctgc cgtctcgcaa aacctgcgcc tgcgttataa caatgttgat gttgctgcca
    42301 gtgccaatgg cgtgagcggc gattatttta atgtctatgg catgaccttc agtgaaggaa
    42361 acacctttaa tcaggagcag ctgaacggtc gtgcgcaggt cgtggttctc gacagtaata
    42421 ctcgccgcca gcttttcccc cataaagcag atgtggttgg cgaggtgatt ctggtcggca
    42481 atatgcccgc cagagtcatt ggtgtggcgg aagaaaaaca gtcgatgttt ggtagcagta
    42541 aagtgctgcg tgtctggcta ccttacagca cgatgtccgg gcgagttatg ggccagtcgt
    42601 ggctgaactc cattactgtc agggtaaaag aaggatttga cagcgccgag gcggaacagc
    42661 aactcacgcg tttactttca ctgcgccacg gaaagaagga tttctttacc tggaacatgg
    42721 acggcgtctt gaaaactgtt gaaaagacca cacgtacttt acaactgttt ctgacgctgg
    42781 tggcggtgat ttcgctggtg gtgggcggta ttggtgtaat gaatattatg ctggtgtcag
    42841 tgaccgagcg gacgcgggaa attggcattc gcatggctgt aggtgcgcga gcaagcgatg
    42901 ttttgcaaca gttcctgatc gaagccgtac tggtttgctt ggtcggtggc gcgttgggaa
    42961 taacgctgtc actgttaatt gctttcacct tgcagctttt cttacccggc tgggagattg
    43021 gtttttcacc gttggcactg ctgctggcgt ttctctgctc gacggccacc gggattttat
    43081 ttggatggtt acccgcacga aatgcggcac gactggatcc agtagatgct ctggtacgag
    43141 agtaattttt gagataaaaa tgccagccga tcgggctggc attttgcctt taggatgtac
    43201 acaatgagac agaagagcta tgcgactgcc gcttctactt cgacgggcac aataacactg
    43261 gcgtgattgc cttttggccc ctggtggaca tcaaactgaa cggattgtcc agcttttagc
    43321 gttctgtaac catccatctg aatggtggaa taatgagcga aaatatcttc gccgccgcct
    43381 tcagggcaga tgaaaccaaa ccctttggca ttgttgaacc acttaacagt acccttttcc
    43441 atgcttcgac atccttcgca aatcttatac aagtaagatg gaataaaccg gggtcagaga
    43501 gggggctgtt caaaacctcg ccaactctag aaatacaatt tagagaatta gggcgagccg
    43561 tcaagcgttt gacaggggcc agggggcagg tatgaatcaa aaatttgaag cagttaacgc
    43621 tattgacagg aatgtgacag atgtcgctga tgccaacgat agatgatagt tatctatcat
    43681 gtggagtaga ttggtcaggc aaataagctc ttgtcagcgg cagggcgttc tgccgataac
    43741 cgtaaccgaa gatgataact gacaatgggt aaaacgaacg actggctgga ctttgatcaa
    43801 ctggcggaag aaaaagttcg cgacgcgcta aaaccgccat ctatgtataa agtgatatta
    43861 gtcaatgatg attacactcc gatggagttt gttattgacg tgttacaaaa attcttttct
    43921 tatgatgtag aacgtgcaac gcaattgatg ctcgctgttc actaccaggg gaaggccatt
    43981 tgcggagtct ttaccgccga ggttgcagaa accaaagtgg cgatggtgaa caagtacgcg
    44041 agggagaatg agcatccatt gctgtgtacg ctagaaaaag cctgaatgca ggcataaaaa
    44101 ttgggggagg tgcctatgct caatcaagaa ctggaactca gtttaaatat ggctttcgcc
    44161 agagcgcgcg agcaccgtca tgagtttatg accgtcgagc acttgttact ggcgctgctc
    44221 agtaacccat ctgcccggga ggcgctggaa gcgtgttctg tggatttggt tgcgctccgt
    44281 caggaactgg aagcctttat tgaacaaacc acacccgttc tgcctgccag tgaagaggag
    44341 cgcgacacac agccgacgct gagttttcag cgtgtactgc aacgtgcggt cttccatgtc
    44401 cagtcctccg gtcgcaatga ggtaaccggt gcaaacgttc tggtcgctat ctttagcgaa
    44461 caggagtcgc aggcggcata tctgttgcgt aaacatgaag tcagccgtct cgatgtggtg
    44521 aactttatct ctcatggcac gcgtaaagac gagccgacac agtcttctga tcctggcagc
    44581 cagccaaaca gcgaagaaca agctggtggg gaggaacgta tggagaattt cacgacgaac
    44641 ctgaatcagc ttgcgcgcgt gggcggaatc gacccactga ttggtcgtga gaaggagctg
    44701 gagcgtgcta ttcaggttct ctgccgtcgc cgtaaaaaca acccgctgct ggtgggggaa
    44761 tctggtgtcg gtaaaaccgc gattgcggaa ggtcttgcct ggcgaattgt tcagggcgat
    44821 gtgccggaag tgatggctga ctgtacgatt tactctctcg atatcggttc tctgttagcg
    44881 ggcactaaat atcgcggcga ctttgaaaaa cgttttaaag cgttgctcaa gcagctggag
    44941 caggacacta acagcatcct gtttattgat gagatccaca ccattatcgg tgcgggtgca
    45001 gcgtctggtg gccaggtcga tgcggctaac ctgatcaaac cgttgctctc cagcggtaaa
    45061 attcgcgtaa ttggttcgac aacctatcag gagttcagca acattttcga gaaagaccgt
    45121 gctctggcgc gtcgcttcca gaaaattgat attactgaac cgtcgatcga agaaactgtt
    45181 caaatcatca atggcctgaa accgaagtat gaagcgcacc acgacgtgcg ttataccgca
    45241 aaagcggtgc gtgcagcggt agagctggcg gtgaaataca ttaacgatcg tcatctgccg
    45301 gataaagcca ttgacgttat cgacgaagcg ggcgctcgcg cacgcctgat gccggtaagc
    45361 aaacgcaaga aaaccgttaa tgtggcggat attgagtccg tggtggcccg tattgcgcgc
    45421 attccagaga agagtgtttc tcagagtgac cgcgataccc tgaaaaacct cggcgatcgc
    45481 ctgaaaatgc tggtcttcgg tcaggataaa gccattgagg cgctgactga agccattaag
    45541 atggcgcgtg caggtttagg tcacgaacat aaaccggttg gttcgttcct gtttgccggc
    45601 cctaccgggg tcgggaaaac agaggtgacg gtacagcttt cgaaagcgtt gggcattgag
    45661 ctgctgcgct ttgatatgtc cgagtatatg gaacgccata ccgtcagccg tctgattggt
    45721 gcgcctccgg gatacgttgg ttttgatcag ggaggtttgc tgactgatgc ggtcatcaag
    45781 catccacatg cggtgctgtt gctggacgaa atcgagaaag cgcatccgga cgtgttcaat
    45841 attctgttgc aggtgatgga caacggtacg ctgaccgata acaacggacg caaagcggac
    45901 ttccgtaacg tggtgctggt gatgaccacc aacgccgggg tacgtgaaac tgagcgtaaa
    45961 tccattggtc ttatccacca ggataacagc accgatgcga tggaagagat caagaagatc
    46021 tttacaccgg aattccgtaa ccgtctcgac aacattatct ggttcgatca tctgtcaact
    46081 gacgtgatcc atcaggtggt ggataaattc atcgtcgagt tgcaggttca gctggatcag
    46141 aaaggtgttt ctctggaagt gagccaggaa gcgcgtaact ggctggccga gaaaggttac
    46201 gaccgggcaa tgggcgcacg tccgatggcg cgtgtcatcc aggacaacct gaaaaaaccg
    46261 ctcgccaacg aactgctgtt tggttcgctg gtggacggcg gtcaggtcac cgtcgcgctg
    46321 gataaagaga aaaatgagct gacttacgga ttccagagtg cacaaaagca caaggcggaa
    46381 gcagcgcatt aatctgattg ttaggtaggt tggtcaagtc cgtaatctcg aaagaggtta
    46441 cggacttttt gtttatgggg tggaggaggt tcagaccctt tttttaatga tgatggtaag
    46501 ttgttgataa ttagtgctgc gggaaggtaa ggacaaaaaa gggtgctgca ggagaatggg
    46561 atggttttgc tttatttaca acgggctaaa cgtgtagtat ttgagttcac tgccgtacag
    46621 gcagcttaga aattcacagg taacatactc cacccgccca ccatgttcac tgccgtacag
    46681 acagataaaa tgcgaaaaaa aagctcgcac tttcgtacga gctcttcttt aaatatggcg
    46741 gtgagggggg gattcgaacc cccgatacgt tgccgtatac acactttcca ggcgtgctcc
    46801 ttcagccact cggacacctc accaaattgt tttgctacca aacctcatgg gtggcaacgg
    46861 ggcgctacta tagggagttg gagtaaaacg gtcaagaaga attttaatga taattattgt
    46921 ttgctcatac tgtaaacaag ttgtgcagta tatctacatc gagacaagtt acggacttat
    46981 acttccaaag tacttcatac atatcacaaa ataaaaaggc cggttaaacc gaccttttac
    47041 tcgttctttc tcttcgccca tcaggcggta aaacaatcag cgactacgga agacaatgcg
    47101 gcctttgctc aggtcgtacg gggtcagttc aacagtcact ttgtcgcccg tcaggatgcg
    47161 gatgtagttt ttgcgcattt taccggagat gtgtgcagta accacgtgac cgttttctaa
    47221 ctctacgcgg aacatggtat taggcaacgt ttcaagaacg gtaccttgca tttcaatatt
    47281 gtcttctttg gccatctaat cctctggggt atcactaccg taatttgaac cggcaagata
    47341 atgccgaagt tctgtaaata agtaaagatt tgcgcgctaa atcgcaacaa acaggttcgg
    47401 cacattactc cgaaaacaca cggctaagcc gcaccaaaag cgcaacgtat aagggagcgg
    47461 tgagataaac gatgggcgtt acctgacgcg aaaaattcct tatcggcagc ggggtaatga
    47521 gcgtaaccaa ctctgcgacc gcaattataa cactctgggg agaaatgtgc cgaaaacatt
    47581 cattcttgtg gtgaaaacaa gcatcgtggt acccagaaat tattcggcaa tcgtccgagg
    47641 cgcatttgat tgagataatt aaggtaatcc cggcggggaa tttcgcaggc accaagcgat
    47701 gctgtgtgat cgttaaggac ctggcagtcg ataagcttac cgccatgacc gataaactcc
    47761 tcacagaata ccagaagcgc cgttttagac gcattttcca tccggctgaa catggactcg
    47821 ccacaaaata gcgttccctg ggccacgccg tacataccgc cgacaagctc atcttcacgc
    47881 cagacttcaa tggagtgggc atggccgagt tcgtgaaggc gatggtaggc ttcgaccacg
    47941 ccacgcgtga tccaggttcc ttcttcgcga tcgctggcac agccttcaat gacctgacca
    48001 aaagcgtaat tcatcgtgac acgatagggc gagcgtttat gaaatcgctt catactacgg
    48061 ctgatatgca gtgattctgg ccatagcacc gcgcggggat cgggcgacca ccagaggatg
    48121 gggtcgcctg gagaaaacca cggaaaaata ccacgctggt aagccattaa caggcgcgca
    48181 gggctaagat cgcccccaag tgccagcagg ccgttaggct cacgtaatgc gccttccggg
    48241 gaagggaagg ctattgaatg gcgagaaagc tgaaccaggc gcatgaccgc aaaactccac
    48301 gcaagtcgga tcgttcaata atagcttaca aaccctgctt gaactggtaa taacgcccct
    48361 gtctggcaag cagctctgcg tgagtacctt gctcaataat ttgcccgttg tccatcacta
    48421 ttatttgttg gaaacgagag agtccgcgaa gtcgatgggt gaccattaac accgttttct
    48481 cacgcatcat ttctgcaagc aattcaagga tctggctttc ggttgtggca tctaagcctt
    48541 cggtaggttc atccagcaac accagtggcg catcatgtaa cagcgcacgg gcgatagcca
    48601 gacggcgcag ttcaccaccg gagagctggc gtccgccttc acctaaccaa ctgttgagac
    48661 ctgcatcctc gagcagcttc tccagaccaa cgcgacgcaa gctctccgcc agagcctcat
    48721 cactactgcc aggcgaggcg agtaacagat tatcacgcag cgtggcgcta aacagatgca
    48781 ctcgctgagg aacaacgctg atggtctgtc gtagagccgc ttcattcagg ctggctatgg
    48841 ggctatcgtt aagcaaaatc tcgccctgtt gcgggtccca agcgcgggtc agcagttgta
    48901 acagtgttga tttgccgcat ccggttcgcc cgagaatcgc aatatgttcc ccggcgttta
    48961 cctgaagaga aatcccttta agtgcctgtt gggattgctc cggataagtg aactgaacat
    49021 cccgtaatgt cagcgaaacg cgatcggcaa cacgagtttg ggtatcaggg aaggtgactt
    49081 ccggtttttg atccgttaaa tcagtgatcc gaacggcaga ggcaatgact tgccccagat
    49141 gctgaaatgc acccgttact ggtgccagtg cttcaaacgc ggctaacgcg cagaagacaa
    49201 acagggcaat taacgcgccg ggttgagcat tgccgccaac gccgccagac gccatccaca
    49261 gcatcaggat caccgctaac gcgccaatga gcagcattat cgcttgcgac aatgcggtca
    49321 gttcagattg acggcgttgc gcttccagcc attgaatttc tgtattctct agttgcgtgc
    49381 gataacgatc gctggcacca aaaatggtca gctcagcttg cccttgcagc caggccgtca
    49441 gttgttggcg atactgtccg cgaagatgag tcagattttg cccggtgctt tttcccgcac
    49501 gataaaacag cggtggcatc aggaaaagcg tcagtaacat aatgccgccc agcgtaaagg
    49561 cgagggtgaa atcaaggaaa cttaacccga ttgtcaccat cataatcacc acaaaagcgc
    49621 ccaccagcgg cgagataacg cgcaggtaaa gatgatcgag cgtatcaaca tccgccacca
    49681 cgcgattgag caattcgccc tgacgatagc gcgccagtcc ggcaggggag aggggcaaca
    49741 atttgctgaa ggtgtaaatg cgcagatgct gcaacacgcg gaaagtcgcg tcgtgactta
    49801 ccagacgttc aaaataacgc ccggcagtac gggtgattgc ggcaccacgc acgcccgcag
    49861 cgggtagcat atagttgaag ctgtacagtc cggcaacccc cgcaaccgct gaggccgaga
    49921 ggaaccagcc ggaaagtgtc aacagtccga tactggcgag cagcgtcaca attgccagca
    49981 caataccaag acttaacatc catttatgac gtttatacag tgctagatag ggtagcaaag
    50041 cgcgcattta aatctcctcc tgacgatggg ccagtaatgt ggcgaatggg ccaccagcca
    50101 cacttaattc cgcgtaacgt ccttgctcaa taatccggcc atcctgcata acccaaatga
    50161 catcccagtc agcaagatct tctaactggt gggtgaccat taacgttgtc tggcgcagag
    50221 aggcggcatt cagcgcctcc attacgcgct gttcactgtg agcatcaagg ctggcagcgg
    50281 gttcatccaa cagtaatagc gaacagggat ttagtaacgc acgggccacc gccacgcgct
    50341 gcgcctgccc cacggaaagg cgggcagcct ggtcgccaac aggcgtatca acgccttgtg
    50401 gcaggagcgg tagaaactcg ctgacccagg cgttatccag cgctgcttgt aattcatgtt
    50461 cgctggcatc aggtcgcgcc agtagtacgt tatcccgtaa tgttgctgcc ggtaattgtg
    50521 gattttgccc aacccaggag agatgtttac gccatgattc tggtgataaa tcgcgtaatt
    50581 ctatcccgtt gattcgtagc gatccctgat atgagagaaa accagaaagc gcgttcaaca
    50641 gtgaactttt acctgaaccg ctgcgaccaa ccaacacggc acgttggcct gctggcaaag
    50701 taaagttcag cggtccggcc agcgttttac cttccggcga cgtgataaac agatcctcgg
    50761 cctcaatggt caccggatcg gtcgatgcta attccacctc gccacactgc ggatgggcga
    50821 gcggggtttc cataaacgtt ttcagactgt cagctgcacc aacagcctgg gctttagcat
    50881 gataaaacgt accgagatcg cgtaatggct ggaaaaactc tggcgcaagg atcagggcca
    50941 gaaaacccgc agccagcgtc acgccagtat cgtagtgacc aaaatccagc tcgccaagat
    51001 aggaaaaacc aaagtagacc gccaccagag caattgacag cgaggtaaaa aattcgagaa
    51061 tgccggagga taaaaatgcc agccgtagca cttccattgt ccgttggcgg aaatcttccg
    51121 aagcagaacg aatactttca atttcagctt caccacgacc aaaaatacgc aatgtttcca
    51181 tgccgcgcag gcgatcgagg aaatgcccac ttaagcgagc aagagcgaga aagttacgtc
    51241 ggttagcatc ggcagccccc attccaacca gcgccataaa caacggaatt aacggtgcag
    51301 tgcccagcag aatgagcgcc gcagcccagt ttgaggggaa gattgccacc acaatcagca
    51361 acggcaccga cactgccagc gccatttgcg gcaggtagcg tgcatagtaa tcatgcatat
    51421 cgtcaatttg ctcgagtacc agcgtcgccc agctccccgc aggtttaccc tgaatccacg
    51481 ctggccctgc ttgttgcaga cggtcgagaa cctgccggcg gatggcaaag cggatatgct
    51541 gcccggcgtg ataacccacc cgttcgcgta accagaccac ccatgcgcgc agtacaaagg
    51601 tcagaaccag taacgtaaag ggaagcagca gggcttcacg gggaatattc tccataatca
    51661 tatgttgcag aattcgcgcc atgaaccagg cctgggcaat gatcaatatg ccgctcacaa
    51721 agcccagcag acgagaaata ttcagccaac gttgggagat gacgctttgc tgttttaacc
    51781 agcgggttaa ctctttttga cgagatttat tcattgcacg cttagcaggt gagttatcag
    51841 aattatttgc agagcaatgt tacaacgggg aaaaaataaa ggcgacccat agtcgcaagg
    51901 tgtcgccttc tttacttttg ttactgattt gtaaaattat tttgcgtcag ctaaaccatc
    51961 gaggtagcgt tccgcatcaa gtgctgccat gcagcctgta ccggccgaag taatggcctg
    52021 acgataaata tgatccatca cgtcacccgc ggcaaagacg ccaggaatgc tggtctgggt
    52081 ggcattacca tgaatacccg actgtacttt gatgtagccg ttttccagtt ccagctgccc
    52141 ttcgaaaatg gcagtattcg ggctgtgacc gatagcaaca aacagaccgg caacgtcgag
    52201 tgattcgatg ttatcgctgt tttgcgtatc gcgcagacga acgccagtga cacccatttg
    52261 atcgccggtc acttcttcca gcgtccggtt ggtgtgcaga atgatgttgc cgttctccac
    52321 tttatccatc agacgcttaa tgaggatttt ttccgcgcgg aaaccgtcac ggcggtgaat
    52381 cagatgtact tccgaagcga tgttagacag atacaacgcc tcttcaaccg cggtattgcc
    52441 gccgccgatg accgcaactt tctggttgcg atagaagaaa ccgtcgcagg ttgcacaagc
    52501 agaaacccca cggcctttaa aggcttcttc agagggcagg ccgagatagc gtgcagaagc
    52561 tccggtggca ataatcagcg cgtcgcaagt gtattcgccg ttatcgccat tcagacggaa
    52621 cggacggttt tgcagatcca ccttgttgat atgatcaaaa atgatttcag tttcaaattt
    52681 ggtggcatgt tcgtgcatgc gctccattaa taacggaccg gtcagatcgt ttggatcgcc
    52741 aggccagttt tccacttctg tggtggtggt cagttggccg cctttttcca tgccggtaat
    52801 cagcacaggt tgcaggttgg cgcgcgccgc atagacagca gcggtgtatc ccgccgggcc
    52861 tgaacccagg ataagcagtt tactgtgttt ggtcgtgccc atgagatccc catagttgtt
    52921 ggcagacaat gggcaggatt gtagggaatt tactgacgta aaaaaagagt atgacgattt
    52981 tgttaacaat ttgtgcaatc ggcagcatcg ataagcaggt caaattctcc cgtcattatc
    53041 acctctgcta cttaaatttc ccgctttata agctgattaa atgatgaata aacgcccctg
    53101 ttaatgaata tctggcatgt tgtactaaaa atcgatgttt tgctttgaca atcccctggt
    53161 gttttgcgaa aacattcgag gaagaaaaaa aacagtattc ttatatgcgc ataaccatgc
    53221 atgtaaatac catgtttacc gtgctagtga aatctacgta tggcgtggac agacgccatt
    53281 cgtgatgtcg atagctgcca caaggcaacg gtcttctcac cgtagaccca ggcattgcgc
    53341 gccgtgaatc ttcatgattt cggtctatcg tgacgggtag cgactctgaa cagtgatgtt
    53401 tcagggtcag acaggagtag ggaaggaata cagagagaca ataataatgg tagatagcaa
    53461 gaagcgccct ggcaaagatc tcgaccgtat cgatcgtaac attcttaatg agttgcaaaa
    53521 ggatgggcgt atttctaacg tcgagctttc taaacgtgtg ggactttccc caacgccgtg
    53581 ccttgagcgt gtgcgtcggc tggaaagaca agggtttatt cagggctata cggcgctgct
    53641 taacccccat tatctggatg catcacttct ggtattcgtt gagattactc tgaatcgtgg
    53701 cgcaccggat gtgtttgaac aattcaatac cgctgtacaa aaacttgaag aaattcagga
    53761 gtgtcattta gtatctggtg atttcgacta cctgttgaaa acacgcgtgc cggatatgtc
    53821 agcttaccgt aagttgctgg gggaaaccct gctgcgtctg cctggcgtca atgacacacg
    53881 gacatacgtt gttatggaag aagtcaagca gagtaatcgt ctggttatta agacgcgcta
    53941 acacggaaca ggtgcaaaat cggcgtattt tgattacact cctgttaatc catacagcaa
    54001 cagtactggg gtaacctggt actgttgtcc gttttagcat cgggcaggaa aagcctgtaa
    54061 cctggagagc ctttcttgag ccaggaatac actgaagaca aagaagtcac attgacaaag
    54121 ttaagtagcg gccgtcgcct tctggaagcg ttgctgatcc ttattgtcct gtttgccgtc
    54181 tggttgatgg ctgccttact aagctttaac ccttcggacc ccagctggtc gcaaacggcc
    54241 tggcatgaac ctatccataa tttaggtggg atgcccggtg cgtggctggc agatacgctg
    54301 ttctttattt ttggcgtgat ggcttacacc attcccgtca ttattgtcgg cggttgttgg
    54361 tttgcctggc gtcatcagtc cagtgacgaa tacattgatt attttgccgt ttcgttacgc
    54421 atcattggcg ttttggcgct catccttacc tcctgtggtc tggcggcaat caacgctgac
    54481 gatatctggt attttgcctc cggtggcgtc attggcagct tactaagcac tacgttacaa
    54541 ccactgctac acagtagcgg gggaactatt gcgctgctct gcgtttgggc tgcgggcctg
    54601 acgctgttca ccggttggtc atgggtgacc attgctgaaa aactcggcgg ctggatttta
    54661 aacattctca ccttcgccag taatcgtacc cgtcgcgatg atacctgggt cgatgaagat
    54721 gaatatgaag atgacgaaga gtatgaagat gaaaaccacg gcaaacagca tgaatcacgc
    54781 cgtgcccgta ttcttcgcgg cgcgctagcg cgtcgtaaac ggttggcgga aaaattcatt
    54841 aatccgatgg ggcggcaaac agacgctgcg ttgttctccg gtaagcggat ggatgatgaa
    54901 gaagagatta tctacactgc acgcggtgtg gctgccgacc cggacgacgt cctattttcg
    54961 ggcaatcgtg caacgcagcc agaatatgac gaatacgatc cattattaaa cggtgcgcca
    55021 attaccgaac ctgttgctgt agcagctgct gctaccacgg cgacacaaag ctgggctgcg
    55081 ccggttgaac ctgtgaccca gacgccgcct gttacttctg ttgatgttcc accttcgcaa
    55141 cctacagtag cctggcagcc tgtaccgggt ccacaaacgg gagagccggt tattgctcct
    55201 gcaccggaag gttacccaca gcagccacaa tatgcgcagc ctgcagtgca atataatgag
    55261 ccgctgcaac aacctgtaca gccacagcag ccgtattatg cgcctgcagc tgaacaacct
    55321 gtgcaacaac cttactacgc tcctgcggcg gaacaacctg ttcagcaacc gtattacgca
    55381 actgcgccgg aacagcctgc gcaacagccg tattatgccc ctgcgccaga acaaccggtg
    55441 gcaggtaacg cctggcaagc cgaagagcag caatccactt ttgctccaca gtctacatac
    55501 cagactgagc aaacttatca gcagccagcc gctcaggagc cgttgtacca acagccgcaa
    55561 cccgttgaac agcagcctgt tgtggagcct gaacccgttg tagaagagac aaaacccgcg
    55621 cgtccgccgc tttactattt tgaagaagtg gaagagaagc gagcccgtga acgtgaacaa
    55681 cttgcggcct ggtatcaacc gattccagaa ccggttaaag aaccagaacc gatcaaatct
    55741 tcgttgaaag cgccttctgc tgcagcagta cctccagtag aagccgctgc cgctgtttct
    55801 ccgctggcat ctggcgtgaa aaaagcgaca ctggcgacgg gggctgccgc aaccgttgcc
    55861 gcgccagtct tcagtctggc aaatagcggt ggaccgcgtc cgcaagtcaa agagggaatt
    55921 ggcccgcagt tgccacgacc gaaacgtatt cgcgtgccaa ctcgtcgtga actggcgtct
    55981 tacggtatta agctgccctc acagcgtgcg gcggaagaga aagcccgtga agcccggcgc
    56041 aatcagtatg attctggcga tcagtataac gatgatgaaa tcgatgcgat gcagcaggat
    56101 gaactggcac gtcagttcgc ccagacacag cagcaacgct atggcgaaca gtatcaacat
    56161 gatgtgcccg taaacgcaga agatgcagat gctgcggcag aggctgaact ggctcgtcag
    56221 tttgcgcaaa ctcaacaaca acgttattcc ggcgaacaac cggctggggc gaatccgttc
    56281 tcgctggatg attttgaatt ttcgccaatg aaagcgttgc tggatgatgg tccacacgaa
    56341 ccgttgttta cgccaattgt tgaacctgta cagcagccgc aacaactggt tgcaccgcag
    56401 cagcagtatc agcagccaca acagccggtt gcgccacagc agcaatatca gcagccgcaa
    56461 cagccggttg cgccgcagcc gcagtatcag cagccacaac agcaggttgc gccgcagcca
    56521 caatatcagc agccgcaaca accggttgca ccgcagcagc aggataccct gcttcatccg
    56581 ctgttgatgc gtaatggcga cagccgtccg ttgcataaac cgacgacgcc gctgccttct
    56641 ctggatttgc tgacaccgcc gccgagcgaa gtggagccgg tagatacctt tgcgcttgaa
    56701 caaatggctc gcctggtgga agcgcgtctg gctgatttcc gtattaaagc cgatgtcgtc
    56761 aattactctc cggggccggt tatcactcgc tttgaactta acctggctcc tggcgtaaaa
    56821 gcggcgcgca tttctaactt gtcacgggac cttgcccgtt cactttcgac ggtggcggtg
    56881 cgtgtcgttg aagttattcc tggcaaaccc tatgtaggtc tggagttacc aaataaaaaa
    56941 cgacaaaccg tttatctgcg cgaagttttg gataacgcca aattccgcga taatccgtcg
    57001 ccattaaccg tggtgctggg taaagatatc gccggtgagc cggtggttgc cgatctggcg
    57061 aaaatgccgc acttgttggt tgcggggact accggttccg gtaaatctgt cggtgtgaac
    57121 gcgatgatcc tgagcatgct ttataaagca cagccagaag atgtgcgttt catcatgatc
    57181 gacccgaaaa tgctggagct ttcggtttat gaaggcattc cgcatctgtt aacggaagtc
    57241 gttactgata tgaaagatgc cgccaacgcg ctgcgctggt gtgttaacga gatggagcgt
    57301 cgttataaac tgatgtctgc gctgggtgtg cgtaatctgg cgggttataa cgaaaaaatt
    57361 gctgaagccg atcgcatgat gcgtccgatt ccagacccgt actggaagcc gggtgacagt
    57421 atggatgccc agcatccggt gctgaaaaaa gaaccataca ttgtggtgtt ggttgacgaa
    57481 tttgccgacc tgatgatgac ggtaggtaaa aaagtggaag agctgatagc acgtctggcg
    57541 caaaaagccc gtgccgcggg tatccacctc gtactggcaa ctcagcgtcc atcggttgat
    57601 gttattactg gtctgattaa agcgaatatt ccgacccgta tcgcctttac cgtatccagt
    57661 aagattgact cacgtaccat tcttgatcag gctggcgcgg aatcactgct ggggatgggg
    57721 gatatgctct actctgggcc gaactccacg ttgccggtac gtgtccatgg tgcttttgtt
    57781 cgcgatcagg aagttcatgc cgtggtgcag gactggaaag cgcgtggtcg cccacagtat
    57841 gttgatggca tcacttccga cagtgaaagc gaaggtggcg cgggcggttt cgatggcgct
    57901 gaagaactgg atccgttgtt cgatcaggcg gtgcagtttg tcactgaaaa acgcaaagcg
    57961 tcaatttctg gcgtacagcg tcagttccgc attggttata accgtgcagc gcgtattatc
    58021 gaacagatgg aagcgcaggg gattgtcagc gaacaggggc acaacggtaa tcgtgaagtg
    58081 ctggccccac cgccgtttga ctaattaatg cattgccgga taaggcgcgg tagcgtcgca
    58141 tccggcactc tatcaactga aaattcagta ttttcttttt tcctcaagct gattattagc
    58201 ctggaataga gagtagaggg aactcccgat cgggagtgac gtaatttgag gaataatgat
    58261 gaaaaaaatt gccatcacct gtgcattact ctcaagctta gtagcaagca gcgtttgggc
    58321 tgatgccgca agcgatctga aaagccgcct ggataaagtc agcagcttcc acgccagctt
    58381 cacacaaaaa gtgactgacg gtagcggtgc ggcggtgcag gaaggtcagg gcgatctgtg
    58441 ggtgaaacgt ccaaacttat tcaactggca tatgacacaa cctgatgaaa gcattctggt
    58501 ttctgacggt aaaacactgt ggttctataa cccgttcgtt gagcaagcta cggcaacttg
    58561 gctgaaagat gccaccggta atacgccgtt tatgctgatt gcccgcaacc agtccagcga
    58621 ctggcagcag tacaatatca aacagaatgg cgatgacttt gtcctgacgc cgaaagccag
    58681 caatggcaat ctgaagcagt tcaccattaa cgtgggacgt gatggcacaa tccatcagtt
    58741 tagcgcggtg gagcaggacg atcagcgcag cagttatcaa ctgaaatccc agcaaaatgg
    58801 ggctgtggat gcagcgaaat ttaccttcac cccgccgcaa ggcgtcacgg tagatgatca
    58861 acgtaagtag aggcacctga gtgagcaatc tgtcgctcga tttttcggat aatacttttc
    58921 aacctctggc cgcgcgtatg cggccagaaa atttagcaca gtatatcggc cagcaacatt
    58981 tgctggctgc ggggaagccg ttgccgcgcg ctatcgaagc cgggcatctg cattctatga
    59041 tcctctgggg gccaccgggt accggcaaaa caactctcgc tgaagtgatt gcccgctatg
    59101 cgaacgctga tgtggaacgt atttctgccg tcacctctgg cgtgaaagag attcgcgagg
    59161 cgatcgagcg cgcccggcaa aaccgcaatg caggtcgccg cactattctt tttgttgacg
    59221 aagttcaccg tttcaacaaa agccagcagg atgcatttct gccacatatt gaagacggca
    59281 ccatcacttt tattggcgca accactgaaa acccgtcgtt tgagcttaat tcggcactgc
    59341 tttcccgtgc ccgtgtctat ctgttgaaat ccctgagtac agaggatatt gagcaagtac
    59401 taactcaggc gatggaagac aaaacccgtg gctatggtgg tcaggatatt gttctgccag
    59461 atgaaacacg acgcgccatt gctgaactgg tgaatggcga cgcgcgccgg gcgttaaata
    59521 cgctggaaat gatggcggat atggccgaag tcgatgatag cggtaagcgg gtcctgaagc
    59581 ctgaattact gaccgaaatc gcaggtgaac gtagtgcccg ctttgataac aaaggtgatc
    59641 gcttttacga tctcatttcc gcactgcata aatcggtacg tggtagcgca cccgatgcgg
    59701 cgctgtactg gtatgcgcga attattactg ccggtggcga tccgttatat gttgcgcgtc
    59761 gctgtctggc gattgcgtct gaagatgtgg gtaatgctga tccacgagcg atgcaggtgg
    59821 caattgcagc ctgggattgc tttactcgcg ttggcccggc ggaaggtgaa cgcgccattg
    59881 ctcaggcgat tgtttacctg gcctgcgcgc caaaaagcaa cgctgtctac actgcgttta
    59941 aagctgcgct ggcggatgct cgcgaacgtc cggattatga cgtgccggtt catttgcgta
    60001 atgcgccgac gaaattaatg aaggaaatgg gctacgggca ggaatatcgt tacgctcatg
    60061 atgaagcaaa cgcttatgct gccggtgagg tttacttccc gcgggaaata gcacaaacac
    60121 gctattattt cccgacaaac aggggccttg aaggcaagat tggcgaaaag ctcgcctggc
    60181 tggctgaaca ggatcaaaat agccccataa aacgctaccg ttaatgttat cgttgcggta
    60241 atgttgttac tgtatccctg tggtcgcagg ctgtggccac atctcccatt taattcgata
    60301 agcacaggat aagcatgctc gatcccaatc tgctgcgtaa tgagccagac gcagtcgctg
    60361 aaaaactggc acgccggggc tttaagctgg atgtagataa gctgggcgct ctcgaagagc
    60421 gtcgtaaagt attgcaggtc aaaacggaaa acctgcaagc ggagcgtaac tcccgatcga
    60481 aatccattgg ccaggcgaaa gcgcgcgggg aagatatcga gcctttacgt ctggaagtga
    60541 acaaactggg cgaagagctg gatgcagcaa aagccgagct ggatgcttta caggctgaaa
    60601 ttcgcgatat cgcgctgacc atccctaacc tgcctgcaga tgaagtgccg gtaggtaaag
    60661 acgaaaatga caacgttgaa gtcagccgct ggggtacccc gcgtgagttt gactttgaag
    60721 ttcgtgacca cgtgacgctg ggtgaaatgc actctggcct cgactttgca gctgcagtta
    60781 agctgactgg ttcccgcttt gtggtaatga aagggcagat tgctcgcatg caccgcgcac
    60841 tgtcgcagtt tatgctggat ctgcataccg aacagcatgg ctacagtgag aactatgttc
    60901 cgtacctggt taaccaggac acgctgtacg gtacgggtca gctgccgaaa tttgctggcg
    60961 atctgttcca tactcgtccg ctggaagaag aagcagacac cagtaactat gcgctgatcc
    61021 caacggcaga agttccgctg actaacctgg tgcgcggtga aatcatcgat gaagatgatc
    61081 tgccaattaa gatgaccgcc cacaccccat gcttccgttc tgaagccggt tcatatggtc
    61141 gtgacacccg tggtctgatc cgtatgcacc agttcgacaa agttgaaatg gtgcagatcg
    61201 tgcgcccgga agactcaatg gcggcgctgg aagagatgac tggtcatgca gaaaaagtcc
    61261 tgcagctgct gggcctgccg taccgtaaaa tcatcctttg taccggcgac atgggctttg
    61321 gcgcttgcaa aacctatgac ctggaagtat ggatcccggc acagaacacc taccgtgaga
    61381 tctcttcctg ctccaacgtt tgggatttcc aggcacgtcg tatgcaggca cgttgccgca
    61441 gcaagtcgga caagaaaacc cgtctggttc ataccctgaa cggttctggt ctggctgttg
    61501 gtcgtacgct ggttgcagta atggaaaact atcagcaggc tgatggtcgt attgaagtac
    61561 cagaagttct gcgtccgtat atgaacggac tggaatatat tggctaatac ccaatttttc
    61621 tgaatctaaa aagcgcctgc gggcgctttt tttgtctccc tttgataccg aacaataatt
    61681 actcctcact tacacgtaat actactttcg agtgaaaatc tacctatctc tttgattttc
    61741 aaattattct atgtatacaa gcctatatag cgagctgcta tagaaataat tacacaatac
    61801 ggtttgttac tggaatcaat cgtgagcaag cttgagtgag ccattatgaa aacgaaaatc
    61861 cctgatgcgg tattggctgc tgaggtgagt cgccgtggtt tggtaaaaac gacagcgatc
    61921 ggcggcctgg caatggccag cagcgcatta acattacctt ttagtcggat tgcgcacgct
    61981 gtcgatagcg ccattccaac aaaatcagac gaaaaggtta tctggagcgc ctgtacagtt
    62041 aactgtggta gtcgctgccc gctacgtatg cacgtcgtgg acggtgaaat caaatatgtc
    62101 gaaacggaca ataccggcga tgacaattac gacggcctgc actaggttcg cgcctgcctg
    62161 cgtgggcgtt ccatgcgtcg ccgtgtctac aatccggacc gcctgaaata tccgatgaaa
    62221 cgagtcgggg cgcgcggtga aggcaaattc gagcgcatta gctgggaaga agcctacgac
    62281 atcatcgcga ccaatatgca gcgcctgatc aaagagtacg gcaacgagtc tatctatctg
    62341 aactatggca ccggtacgct gggcggcacc atgacccgct cctggccgcc gggaaatacc
    62401 ctggtcgcgc ggctgatgaa ctgctgcggc ggctatctga accattacgg cgactactcc
    62461 tccgcgcaaa ttgcggaagg tttgaactat acctacggcg gctgggcaga tggcaacagc
    62521 ccgtcggata tcgaaaacag taagctggta gtgctgtttg gtaataaccc tggcgaaacg
    62581 cgaatgagtg gcagtggggt gacttactat cttgaacagg cacgccagaa atctaatgcc
    62641 cgcatgatca tcatcgatcc gcgctatacc gacaccggtg ccgggcgcga agatgagtgg
    62701 atccctattc gtccgggaac agatgccgca ctggttaacg gtctggcgta cgtcatgatc
    62761 actgaaaacc tggtggatca ggcattcctc gataaatatt gcgttggcta cgatgagaaa
    62821 accctgccag ccagtgcgcc gaaaaatggc cactataaag cttatattct gggtgaaggg
    62881 ccagatggcg tggctaaaac accggaatgg gcctcacaaa tcaccggtgt tccggcagac
    62941 aaaatcatca aactggctcg tgaaatcggc agtaccaaac cggcgtttat cagccaggga
    63001 tggggcccgc agcgtcacgc taacggtgaa atcgcaaccc gtgctatctc gatgctggcg
    63061 attctgaccg gtaacgttgg tattaacgga ggcaacagcg gcgcgcgtga aggttcatac
    63121 agcttaccgt ttgtccgtat gccgaccttg gaaaacccga tccagaccag catttcgatg
    63181 tttatgtgga ccgatgccat tgaacgtggc ccggaaatga cggcgctgcg tgatggtgta
    63241 cgcgggaaag ataagctgga tgtgccgatc aaaatgatct ggaactatgc cggtaactgc
    63301 ctgattaacc agcattctga aatcaaccgt acccatgaaa tccttcagga tgataagaag
    63361 tgcgagctga ttgtggttat cgactgccac atgacctcat cggcgaaata tgctgacatc
    63421 ctgctgcctg actgcaccgc ttccgaacag atggactttg cgctggatgc atcctgcggg
    63481 aatatgtctt acgtgatttt caacgatcag gtgattaaac cgcgctttga atgtaagacc
    63541 atctatgaaa tgaccagcga actggcaaaa cgtcttggcg ttgagcaaca gtttactgaa
    63601 ggccgtacac aggaagagtg gatgcggcat ctgtatgccc agtcgcggga agcgattcct
    63661 gaactaccaa cgtttgaaga gttccgcaag caggggatct ttaaaaagcg cgacccacaa
    63721 gggcaccacg ttgcttataa agctttccgt gaagatcctc aggcaaattc actgaccacg
    63781 ccatcgggca aaattgagat ttattcgcag gcgctggctg acattgccgc tacctgggaa
    63841 ttgccagaag gagatgtgat cgatccactg ccgatctaca cgccgggctt tgaaagttat
    63901 caggatccgt tgaacaaaca gtatccgctg cagcttacgg gtttccacta taaatctcgc
    63961 gttcactcaa cttacggcga cgttgatgtg ctgaaagcag cttgccgtca ggaaatgtgg
    64021 atcaacccgc ttgatgcgca aaaacgcggt atcaacaacg gcgataaagt caggatcttt
    64081 aacgatcttg gtgaggttca tattgaggcg aaagtgacgc cacgaatgat gccgggtgtg
    64141 gtcgcactgg gtgaaggtgc ctggtatgac ccggatacaa aacgtgtcga taagggcggt
    64201 tgtatcaacg tactgaccac tcaacgtccg tctcctctcg ctaaggggaa tccgtcacat
    64261 acaaaccttg ttcaggttga aaaggtgtaa ggagtaaccg atgacaaccc agtatggatt
    64321 ttttattgat tccagccgtt gcaccggttg caaaacctgc gagctggcct gtaaagacta
    64381 caaagatttg acgccagaag tcagcttccg ccgcatttat gaatatgctg gcggcgactg
    64441 gcaggaagat aacggtgtct ggcaccagaa cgtgtttgcc tactatctgt cgatttcatg
    64501 taaccactgc gaagatccgg cttgtactaa agtctgcccg agcggtgcga tgcataaacg
    64561 tgaagatggt tttgttgtgg tcgatgaaga tgtgtgcatt ggctgccgct actgccatat
    64621 ggcttgcccg tatggcg
//
LOCUS       DADMJE010000007        47217 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.007, whole genome shotgun sequence.
ACCESSION   DADMJE010000007 DADMJE010000000
VERSION     DADMJE010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 47217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 47217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..47217
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.007"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            27..764
                     /locus_tag="JN001_000418"
     CDS             27..764
                     /locus_tag="JN001_000418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY9051757.1"
                     /translation="MPARHLYFIMTNTWNRLALLIFAVLSLLVAGELRAGVVVGGTRF
                     IFPADRESISILLANTSQESWLINSKINRPTRWAGGKASTVPAPLLAAPPLILLKPGT
                     TGTLRLLRTESDILPVDRETLFELSIASVPSGKVENQSVKVAMRSVFKLFWRPEGLPG
                     DPLEAYQQLRWTRNSQGVQLTNPTPYYINLIQVSVNGKALSNAGVVPPKSQRQTSWCQ
                     AIAPCHVAWRAINDYDGLSAKKEQNLP"
     gene            875..1885
                     /gene="pyrD"
                     /locus_tag="JN001_000419"
     CDS             875..1885
                     /gene="pyrD"
                     /locus_tag="JN001_000419"
                     /EC_number="1.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent dihydroorotate dehydrogenase"
                     /protein_id="HAY9051758.1"
                     /translation="MYYPFVRKALFQLDPERAHEFTFQQLRRITGTPFEALVRQKVPA
                     KPVNCMGLTFKNPLGLAAGLDKDGECIDALGAMGFGSIEIGTVTPRPQPGNDKPRLFR
                     LVDAEGLINRMGFNNLGVDNLVENVKKAHYDGVLGINIGKNKDTPVEQGKDDYLICME
                     KIYAYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKI
                     APDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST
                     EIIRRLSLELNGRLPIIGVGGIDSVIAAREKIAAGASLVQIYSGFIFKGPPLIKEIVT
                     HI"
     gene            2059..2601
                     /gene="zapC"
                     /locus_tag="JN001_000420"
     CDS             2059..2601
                     /gene="zapC"
                     /locus_tag="JN001_000420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415466.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapC"
                     /protein_id="HAY9051759.1"
                     /translation="MRIKPDDNWRWYYDEEHDRMMLDLANGMLFRSRFARKMLTPDAF
                     SPAGFCVDDAALYFSFEEKCRDFNLSKEQKAELVLNVLVAIRYLKPQMPKSWHFVSHG
                     EMWVPMPGDAACVWLSDTHEQVNLLVVESGENAALCLLAQPCVVIAGRAMQLGDAIKI
                     MNDRLKPQVNVDSFSLEQAV"
     gene            complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JN001_000421"
     CDS             complement(2598..3707)
                     /gene="ycbX"
                     /locus_tag="JN001_000421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein YcbX"
                     /protein_id="HAY9051760.1"
                     /translation="MATLTRLFIHPVKSMRGIGLTHALADVSGLAFDRIFMITEPDGT
                     FITARQFPQMVRFTPSPVHDGLHLTAPDGSSAYVRFADFATQDAPTEVWGTHFTARIA
                     PDAINKWLSGFFSREVQLRWVGPQMTRRVKRHNTVPLSFADGYPYLLANEASLRDLQQ
                     RCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQ
                     KHPAGEPLKTLQSFRTAQDNGDVDFGQNLIARNSGVIRVGDEVEILATAPAKIYGAAA
                     ADDTANITQQPDANVDIDWQGQAFRGNNQQVLLEQLENQGIRIPYSCRAGICGSCRVQ
                     ILEGEVSPLKKSAMGDDGTILCCSCVPKTALKLAR"
     gene            3951..6059
                     /gene="rlmKL"
                     /locus_tag="JN001_000422"
     CDS             3951..6059
                     /gene="rlmKL"
                     /locus_tag="JN001_000422"
                     /EC_number="2.1.1.173"
                     /EC_number="2.1.1.264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 23S rRNA
                     (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA
                     (guanine(2445)-N(2))-methyltransferase RlmL"
                     /protein_id="HAY9051761.1"
                     /translation="MNSLFASTARGLEELLKTELENLGAVECQVVQGGVHFKGDTRLV
                     YQSLMWSRLASRIMLPLGECKVYSDLDLYLGVQAINWTEMFNPGATFAVHFSGLNDTI
                     RNSQYGAMKVKDAIVDAFTRKNLPRPNVDRDAPDIRVNVWLHKETASIALDLSGDGLH
                     LRGYRDRAGIAPLKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGL
                     HRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNAR
                     LAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMK
                     NQFGGWNLSLFSASPDLLSCLQLRADKQYKAKNGPLDCVQKNYHVAESTPDSKPAMVA
                     EDYANRLRKNLKKFEKWARQEGIECYRLYDADLPEYNVAVDRYSDWVVVQEYAPPKTI
                     DAHKARQRLFDIIAATISVLGIAPNKLVLKTRERQKGKNQYQKLGEKGEFLEVTEYNA
                     HLWVNLTDYLDTGLFLDHRIARRMLGQMSKGKDFLNLFSYTGSATVHAGLGGALSTTT
                     VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKR
                     MEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFRMDLDGLAKLGLKAQEITQKT
                     LSQDFARNRQIHNCWLITAA"
     gene            6071..7978
                     /locus_tag="JN001_000423"
     CDS             6071..7978
                     /locus_tag="JN001_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9051762.1"
                     /translation="MSLISMHGAWLSFSDAPLLDNAELHIEDNERVCLVGRNGAGKST
                     LMKILNREQGLDDGRIIYEQDLIVARLQQDPPRNVEGSVYDFVAEGIEEQAEYLKRYH
                     DISRLVMNDPSEKNLNELAKVQEQLDHHNLWQLENRINEVLAQLGLDPNVALSSLSGG
                     WLRKAALGRALVSNPRVLLLDEPTNHLDIETIDWLEGFLKTFNGTIIFISHDRSFIRN
                     MATRIVDLDRGKLVTYPGNYDQYLLEKEEALRVEELQNAEFDRKLAQEEVWIRQGIKA
                     RRTRNEGRVRALKAMRRERGERREVMGTAKMQVEEASRSGKIVFEMEDVCYQVDGKQL
                     VKDFSAQVLRGDKIVLIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVAYFDQHRA
                     ELDPDKTVMDNIAEGKQEVMVNGKPRHVLSYLQDFLFHPKRAMTPVRALSGGERNRLL
                     LARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW
                     IFEGGGKIGRYVGGYHDARGQQEQYVALKQPAVKKTEEAAAAKAETVKRSSSKLSYKL
                     QRELEQLPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFER
                     WEYLEALKNGG"
     gene            8108..9361
                     /gene="pqiA"
                     /locus_tag="JN001_000424"
     CDS             8108..9361
                     /gene="pqiA"
                     /locus_tag="JN001_000424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiA"
                     /protein_id="HAY9051763.1"
                     /translation="MCEHHHAAKHILCSQCDMLVALPRLEHGQKAACPRCGTTLTVAW
                     DAPRQRPTAYALAALFMLLLSNLFPFVNMNVAGVTSEITLLEIPGVLFSEDYASLGTF
                     FLLFVQLVPAFCLITILLLVNRAELPVRLKEQLARVLFQLKTWGMAEIFLAGVLVSFV
                     KLMAYGSIGVGSSFLPWCLFCVLQLRAFQCVDRRWLWDDIAPMPELRQPLKPGVTGIR
                     QGLRSCSCCTAILPADEPVCPRCSTKGYVRRRNSLQWTLALLVTSIMLYLPANILPIM
                     VTDLLGSKMPSTILAGVILLWSEGSYPVAAVIFLASIMVPTLKMIAIAWLCWDAKGHG
                     KRDSERMHLIYEVVEFVGRWSMIDVFVIAVLSALVRMGGLMSIYPAMGALMFALVVIM
                     TMFSAMTFDPRLSWDRQPESEHEES"
     gene            9366..11006
                     /gene="pqiB"
                     /locus_tag="JN001_000425"
     CDS             9366..11006
                     /gene="pqiB"
                     /locus_tag="JN001_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706874.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intermembrane transport protein PqiB"
                     /protein_id="HAY9051764.1"
                     /translation="MESNNGEAKIQKVKNWSPVWIFPIVTALIGAWVLFYHYSHQGPE
                     VTLITANAEGIEGGKTTIKSRSVDVGVVESATLADDLTHVEIKARLNSGMEKLLHKDT
                     VFWVVKPQIGREGISGLGTLLSGVYIELQPGAKGSKMDKYDLLDSPPLAPPDAKGIRV
                     ILDSKKAGQLSPGDPVLFRGYRVGSVETSTFDTQKRNISYQLFINAPYDRLVTSNVRF
                     WKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPKTAFVLYDDQKS
                     IQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYR
                     IPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNT
                     PAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRT
                     MKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVADMQRL
                     DQVLRELQPVLKTLNEKSNALVFEAKDKKDPEPKRAKQ"
     gene            11003..11566
                     /gene="pqiC"
                     /locus_tag="JN001_000426"
     CDS             11003..11566
                     /gene="pqiC"
                     /locus_tag="JN001_000426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity-associated transporter
                     subunit PqiC"
                     /protein_id="HAY9051765.1"
                     /translation="MKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNR
                     LLWVEQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGW
                     VVASQPLGSVQDTLNVTVTEFNGRYDGKVIVSGEWLLNHQGQLIKRPFRLEGVQTQDG
                     YDEMVKVLAGVWSQEAASIAQEIKRLP"
     gene            11822..11989
                     /gene="rmf"
                     /locus_tag="JN001_000427"
     CDS             11822..11989
                     /gene="rmf"
                     /locus_tag="JN001_000427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome modulation factor"
                     /protein_id="HAY9051766.1"
                     /translation="MKRQKRDRLERAHQRGYQAGIAGRSKEMCPYQTLNQRSQWLGGW
                     REAMADRVVMA"
     gene            complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JN001_000428"
     CDS             complement(12059..12577)
                     /gene="fabA"
                     /locus_tag="JN001_000428"
                     /EC_number="4.2.1.59"
                     /EC_number="5.3.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014915875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-hydroxydecanoyl-ACP
                     dehydratase/trans-2-decenoyl-ACP isomerase"
                     /protein_id="HAY9051767.1"
                     /translation="MVDKRESYTKEDLLASGRGELFGAKGPQLPAPNMLMMDRVVKMT
                     ETGGNFDKGYVEAELDINPDLWFFGCHFIGDPVMPGCLGLDAMWQLVGFYLGWLGGEG
                     KGRALGVGEVKFTGQVLPTAKKVTYRIHFKRIVNRRLIMGLADGEVLVDGRLIYTASD
                     LKVGLFQDTSAF"
     gene            complement(12646..14406)
                     /locus_tag="JN001_000429"
     CDS             complement(12646..14406)
                     /locus_tag="JN001_000429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lon protease family protein"
                     /protein_id="HAY9051768.1"
                     /translation="MTITKLAWRDLVPDTDSYQEIFAQPHLIDENDPLFSDTQPRLQF
                     ALEQLLHTRASSSFMLAKAPEESEYLNLIADAARTLQSDAGQLVGDHYEVSGHSIRLR
                     HAVSADDNFATLTQVVAADWVEAEQLFGCLRQFNGDITLQPGLVHQANGGILIISLRT
                     LLAQPLLWMRLKNIVNRERFDWVAFDESRPLPVSVPSMPLKLKVILVGERESLADFQE
                     MEPELSEQAIYSEFEDTLQIVDAESVSQWCRWVTFTARHNHLPAPGADAWPVLIREAA
                     RYTGEQETLPLSPQWILRQCKEVASLCDGDTFSGEQLNLMLQQREWREGFLAERMQDE
                     ILQEQILIETEGERIGQINALSVIEFPGHPRAFGEPSRISCVVHIGDGEFTDIERKAE
                     LGGNIHAKGMMIMQAFLMSELQLEQQIPFSASLTFEQSYSEVDGDSASMAELCALISA
                     LADVPVNQSIAITGSVDQFGRAQPVGGLNEKIEGFFAICQQRELTGKQGVIIPTANVR
                     HLSLHSELVKAVEEGKFTIWAVDDVTDALPLLLNLVWDGEGQTTLMQTIQERIAQASQ
                     QEGRHRFPWPLRWLNWFIPN"
     gene            14592..15044
                     /gene="matP"
                     /locus_tag="JN001_000430"
     CDS             14592..15044
                     /gene="matP"
                     /locus_tag="JN001_000430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ter protein MatP"
                     /protein_id="HAY9051769.1"
                     /translation="MKYQQLENLESGWKWKYLVKKHREGELITRYIEASAAQEAVDVL
                     LSLENEPVLVNGWIDKHMNPELVNRMKQTIRARRKRHFNAEHQHTRKKSIDLEFIVWQ
                     RLAGLAQRRGKTLSETIVQLIEDAENKEKYANKMSSLKLDLQALLGKE"
     gene            complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JN001_000431"
     CDS             complement(15120..16160)
                     /gene="ompA"
                     /locus_tag="JN001_000431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpA"
                     /protein_id="HAY9051770.1"
                     /translation="MKKTAIAIAVALAGFATVAQAAPKDNTWYTGAKLGWSQYHDTGF
                     INNNGPTHENQLGAGAFGGYQVNPYVGFEMGYDWLGRMPYKGSVENGAYKAQGVQLTA
                     KLGYPITDDLDIYTRLGGMVWRADTKSNVYGKNHDTGVSPVFAGGVEYAITPEIATRL
                     EYQWTNNIGDAHTIGTRPDNGMLSLGVSYRFGQGEAAPVVAPAPAPAPEVQTKHFTLK
                     SDVLFNFNKATLKPEGQAALDQLYSQLSNLDPKDGSVVVLGYTDRIGSDAYNQGLSER
                     RAQSVVDYLISKGIPADKISARGMGESNPVTGNTCDNVKQRAALIDCLAPDRRVEIEV
                     KGIKDVVTQPQA"
     gene            complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JN001_000432"
     CDS             complement(16517..17026)
                     /gene="sulA"
                     /locus_tag="JN001_000432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division inhibitor SulA"
                     /protein_id="HAY9051771.1"
                     /translation="MYTSGYAHRSSSFSSAASKIARVSTENTTAGLISEVVYREDQPM
                     MTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWVQASGLPLTKVMQISQLSPCHTVES
                     MVRALRTGNYSVVIGWLADDLTEEEHAELVDAANEGNAMGFIMRPVSASSHATRQLSG
                     LKIHSNLYH"
     gene            17245..17874
                     /gene="sxy"
                     /locus_tag="JN001_000433"
     CDS             17245..17874
                     /gene="sxy"
                     /locus_tag="JN001_000433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CRP-S regulon transcriptional coactivator Sxy"
                     /protein_id="HAY9051772.1"
                     /translation="MKSLSYKRIYKSQEYLAMLGTIEYRSLFGSYSLTVDDTVFAMVS
                     DGELYLRACEQSAQYCVKHPPVWLTYKKCGRSVTLNYYRVDESLWRNQLKLVRLSKYS
                     LDAALKEKSTRNTRERLKDLPNMSFHLEAILGEVGIKDVRALRILGAKMCWLRLRQQN
                     SLVTEKILFMLEGAIIGIHEAALPVARRQELAEWADSLTPKQEFPAELE"
     gene            complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="JN001_000434"
     CDS             complement(17837..19999)
                     /gene="yccS"
                     /locus_tag="JN001_000434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309071.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01666 family membrane protein"
                     /protein_id="HAY9051773.1"
                     /translation="MAFMLSPLLKRYTWNSAWLYYARIFIALCGTTAFPWWLGDVKLT
                     IPLTLGMVAAALTDLDDRLAGRLRNLIITLFCFFIASASVELLFPWPWLFAIGLTLST
                     SGFILLGGLGQRYATIAFGALLIAIYTMLGTSLYEHWYQQPMYLLAGAVWYNVLTLIG
                     HLLFPVRPLQDNLARCYEQLARYLELKSRMFDPDIEDESQAPLYDLALANGLLMATLN
                     QTKLSLLTRLRGDRGQRGTRRTLHYYFVAQDIHERASSSHIQYQTLREHFRHSDVLFR
                     FQRLMSMQGQACQQLSRCILLRQPYQHDPHFERAFTHIDAALERMRDNGAPADLLKTL
                     GFLLNNLRAIDAQLATIESEQAQALPHNNDENELADDSPHGLSDIWLRLSRHFTPESA
                     LFRHAVRMSLVLCFGYAIIQITGMHHGFWILLTSLFVCQPNYNATRHRLKLRIIGTLV
                     GIAIGIPVLWFVPSLEGQLVLLVITGVLFFAFRNVQYAHATMFITLLVLLCFNLLGEG
                     FEVALPRVIDTLIGCAIAWAAVSYIWPDWQFRNLPRMLERATEANCRYLDAILEQYHQ
                     GRDNRLAYRIARRDAHNRDAELASVVSNMSSEPNVTPQIREAAFRLLCLNHTFTSYIS
                     ALGAHREQLTNPEILAFLDDAVCYVDDALHHQPADEERVNEALASLKQRMQQLEPRAD
                     SKEPLVVQQVGLLIALLPEIGRLQRQITQVPQETPVSA"
     gene            complement(20009..20455)
                     /locus_tag="JN001_000435"
     CDS             complement(20009..20455)
                     /locus_tag="JN001_000435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HAY9051774.1"
                     /translation="MRTVLNILNFVLGGFATTLGWLLATLVSIVLIFTLPLTRSCWEI
                     TKLSLVPYGNEAIHVDELNPAGKNVLLNTGGTVLNIFWLIFFGWWLCLMHIATGIAQC
                     ISIIGIPVGIANFKIAAIALWPVGRRVVSVETAQAAREANARRRFE"
     gene            20578..22632
                     /gene="helD"
                     /locus_tag="JN001_000436"
     CDS             20578..22632
                     /gene="helD"
                     /locus_tag="JN001_000436"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase IV"
                     /protein_id="HAY9051775.1"
                     /translation="MELKATTLGKRLAQHPYDRAVILNAGIKVSGDRHEYLIPFNQLL
                     AIHCKRGLVWGELEFVLPDEKVVRLHGTEWGETQRFYHHLDAHWRRWSGEMSEIASGV
                     LRQQLDLIATRTGENKWLTREQTSGVQQQIRQALSALPLPVNRLEEFDNCREAWRKCQ
                     AWLKDIESARLQHNQAYTEAMLTEYADFFRQVESSPLNPAQARAVVNGEHSLLVLAGA
                     GSGKTSVLVARAGWLLARGEASPEQILLLAFGRKAAEEMDERIRERLHTEDITARTFH
                     ALALHIIQQGSKKVPIVSKLENDTAARHELFIAEWRKQCSEKKAQAKGWRQWLTEEMQ
                     WSVPEGNFWDDEKLQRRLASRLDRWVSLMRMHGGAQAEMIASAPEEIRDLFSKRIKLM
                     APLLKAWKGALKAENAVDFSGLIHQAIVILEKGRFISPWKHILVDEFQDISPQRAALL
                     AALRKQNSQTTLFAVGDDWQAIYRFSGAQMSLTTAFHENFGEGERCDLDTTYRFNSRI
                     GKVANRFIQQNPGQLKKPLNSLTNGDKKAVTLLDESQLDALLDKLSGYAKPEERILIL
                     ARYHHMRPASLEKAATRWPKLQIDFMTIHASKGQQADYVIIVGLQEGSDGFPAAARES
                     IMEEALLPPVEDFPDAEERRLMYVALTRARHRVWALFNKENPSPFVEILKNLDVPVAR
                     KP"
     gene            complement(22664..23122)
                     /gene="mgsA"
                     /locus_tag="JN001_000437"
     CDS             complement(22664..23122)
                     /gene="mgsA"
                     /locus_tag="JN001_000437"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HAY9051776.1"
                     /translation="MELTTRTLPARKHIALVAHDHCKQMLMSWVERHQPLLEQHVLYA
                     TGTTGNLISRATGMNVNAMLSGPMGGDQQVGALISEGKIDVLIFFWDPLNAVPHDPDV
                     KALLRLATVWNIPVATNVATADFIIQSPHFNDAVDILIPDYQRYLADRLK"
     gene            complement(23218..23880)
                     /locus_tag="JN001_000438"
     CDS             complement(23218..23880)
                     /locus_tag="JN001_000438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2057 family protein"
                     /protein_id="HAY9051777.1"
                     /translation="MKTGIVTTLIALCLPVSVFATTLRLSTDVDLLVLDGKKVSSSLL
                     RGADSIELDNGPHQLVFRVEKTIHLSNSEERLYISPPLVVSFNTQLINQVNFRLPRLE
                     NEREANHFDAAPRLELLDGDATPIPVKLDILAITSTAKTIDYEVEVERYNKSAKRASL
                     PQFATMMADDSTLLSGVSELDAIPPQSQVLTEQRLKYWFKLADPQTRNTFLQWAEKQP
                     SS"
     gene            24053..24466
                     /locus_tag="JN001_000439"
     CDS             24053..24466
                     /locus_tag="JN001_000439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HAY9051778.1"
                     /translation="MKETDIAGILTSTHTIALVGASDKPDRPSYRVMKYLLDQGYHVI
                     PVSPKVAGKTLLGQQGYGTLADVPEKVDMVDVFRNSEAAWGVAQEAIAIGAKTLWMQL
                     GVINEQAAVLARDAGLNVVMDRCPAIEIPRLGLAK"
     gene            complement(24511..24828)
                     /gene="hspQ"
                     /locus_tag="JN001_000440"
     CDS             complement(24511..24828)
                     /gene="hspQ"
                     /locus_tag="JN001_000440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HAY9051779.1"
                     /translation="MIASKFGIGQQVRHSLLGYLGVVVDIDPVYSLSEPSPDELAVND
                     ELRAAPWYHVVMEDDNGLPVHTYLAEAQLSSELQDEHPEQPSMDELAQTIRKQLQAPR
                     LRN"
     gene            complement(24886..26076)
                     /gene="rlmI"
                     /locus_tag="JN001_000441"
     CDS             complement(24886..26076)
                     /gene="rlmI"
                     /locus_tag="JN001_000441"
                     /EC_number="2.1.1.191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytosine(1962)-C(5))-methyltransferase
                     RlmI"
                     /protein_id="HAY9051780.1"
                     /translation="MSVRLVLAKGREKSLLRRHPWVFSGAVARMEGKASLGETIDIVD
                     HQGKWLARGAYSPASQIRARVWTFDPSESIDIAFFSRRLQQAQKWRDWLAQKDGLDSY
                     RLIAGESDGLPGITIDRFGNFLVLQLLSAGAEYQRAALVSALQTLYPECAIYDRSDVA
                     VRKKEGMELTLGLVTGELPPALLPIEEHGMKLLVDIQHGHKTGYYLDQRDSRLATRRY
                     VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFV
                     RDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGI
                     LLTFSCSGLMTSDLFQKIIADAAIDAGRDVQFIEQFRQAADHPVIATYPEGLYLKGFA
                     CRVM"
     gene            26171..26449
                     /gene="yccX"
                     /locus_tag="JN001_000442"
     CDS             26171..26449
                     /gene="yccX"
                     /locus_tag="JN001_000442"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HAY9051781.1"
                     /translation="MSKVCIIAWVYGRVQGVGFRYTTQYEAKRLGLTGYAKNLDDGSV
                     EVVACGEEGQVEKLMQWLKSGGPRSARVERVLSEPHHPSGELTDFRIR"
     gene            complement(26446..26775)
                     /gene="tusE"
                     /locus_tag="JN001_000443"
     CDS             complement(26446..26775)
                     /gene="tusE"
                     /locus_tag="JN001_000443"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309080.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusE"
                     /protein_id="HAY9051782.1"
                     /translation="MLIFEGKEIETDTEGYLKESSQWSEPLAVVIAENEGISLSPEHW
                     EVVRFVRDFYLEFNTSPAIRMLVKAMANKFGEEKGNSRYLYRLFPKGPAKQATKIAGL
                     PKPVKCI"
     gene            complement(26866..27525)
                     /gene="yccA"
                     /locus_tag="JN001_000444"
     CDS             complement(26866..27525)
                     /gene="yccA"
                     /locus_tag="JN001_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000375124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease modulator YccA"
                     /protein_id="HAY9051783.1"
                     /translation="MDRIVSSSHDRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTV
                     LMLPSPGLILTLVGMYGLMFLTYKTANKPTGIISAFAFTGFLGYILGPILNTYLSAGM
                     GDVIAMALGGTALVFFCCSAYVLTTRKDMSFLGGMLMAGIVVVLIGMVANIFLQLPAL
                     HLAISAVFILISSGAILFETSNIVHGGETNYIRATVSLYVSLYNIFVSLLSILGFASR
                     D"
     gene            complement(27732..27819)
                     /locus_tag="JN001_000445"
     tRNA            complement(27732..27819)
                     /locus_tag="JN001_000445"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(27783..27785),aa:Ser,seq:tga)
     gene            28246..29364
                     /gene="hyaA"
                     /locus_tag="JN001_000446"
     CDS             28246..29364
                     /gene="hyaA"
                     /locus_tag="JN001_000446"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 small subunit"
                     /protein_id="HAY9051784.1"
                     /translation="MNNEETFYQAMRRQGVTRRSFLKYCSLAATSLGLGAGMAPKIAW
                     ALENKPRIPVVWIHGLECTCCTESFIRSAHPLAKDVILSLISLDYDDTLMAAAGTQAE
                     EVFEDIITQYNGKYILAVEGNPPLGEQGMFCISSGRPFIEKLKRAAAGASAIIAWGTC
                     ASWGCVQAARPNPTQATPIDKVITDKPIIKVPGCPPIPDVMSAIITYMVTFDRLPDVD
                     RMGRPLMFYGQRIHDKCYRRAHFDAGEFVQSWDDDAARKGYCLYKMGCKGPTTYNACS
                     STRWNDGVSFPIQSGHGCLGCAENGFWDRGSFYSRVVDIPQMGTHSTADTVGLTALGV
                     VAAAVGVHAVASAVDQRRRHNQQPTETEHQPGNEDKQA"
     gene            29361..31154
                     /gene="hyaB"
                     /locus_tag="JN001_000447"
                     /pseudo
     CDS             29361..31154
                     /gene="hyaB"
                     /locus_tag="JN001_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415492.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase large subunit"
     gene            31173..31880
                     /gene="hyaC"
                     /locus_tag="JN001_000448"
     CDS             31173..31880
                     /gene="hyaC"
                     /locus_tag="JN001_000448"
                     /EC_number="1.12.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase b-type cytochrome subunit"
                     /protein_id="HAY9051785.1"
                     /translation="MQQKSDNVVSHYVFEAPVRIWHWLTVLCMAVLMVTGYFIGKPLP
                     SVSGEATYLFYMGYIRLIHFSAGMVFTVVLLMRIYWAFVGNRYSRELFIVPVWRKSWW
                     QGVWYEIRWYLFLAKRPSADIGHNPIAQAAMFGYFLMSVFMIITGFALYSEHSQYAIF
                     APFRYVVEFFYWTGGNSMDIHSWHRLGMWLIGAFVIGHVYMALREDIMSDGTVISTMV
                     NGYRSHKFGKISNKECS"
     gene            31877..32464
                     /locus_tag="JN001_000449"
     CDS             31877..32464
                     /locus_tag="JN001_000449"
                     /EC_number="3.4.23.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 1 maturation protease"
                     /protein_id="HAY9051786.1"
                     /translation="MSEQRVVVMGLGNLLWADEGFGVRVAERLYAHYHWPEYVEIVDG
                     GTQGLNLLGYVESASHLLILDAIDYGLEPGTLRTYAGERIPAYLSAKKMSLHQNSFSE
                     VLALADIRGHLPAHIALVGLQPAMLDDYGGSLSELAREQLLAAEQSALAQLAAWGSVP
                     QLANESRCLNYDCLSMENYEGVRLRQYRMTQEEQG"
     gene            32461..32859
                     /gene="hyaE"
                     /locus_tag="JN001_000450"
     CDS             32461..32859
                     /gene="hyaE"
                     /locus_tag="JN001_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-1 operon protein HyaE"
                     /protein_id="HAY9051787.1"
                     /translation="MSNDTPFDALWQRMLARGWTPVSESRLDDWLTQAPDGVVLLSSD
                     PKRTPEVSDNPVMIGELLHEFPDYTWQVAIADLEQSEAIGDRFGVFRFPTTLVFTGGN
                     YRGVLNGIHPWAELINLMRGLVEPQQERAS"
     gene            32856..33713
                     /locus_tag="JN001_000451"
     CDS             32856..33713
                     /locus_tag="JN001_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression/formation protein"
                     /protein_id="HAY9051788.1"
                     /translation="MSETFFHLLGPGTQPNDDSFSMNPLPITCQVNDEPSMAALEQCA
                     HSPQVIALLNELQHQLSERQPPLGEVLAVDLLNLNADDRHFINTLLGEGEVSVRIQQA
                     DDSKSEIQEAIFCGLWRVRRRRGEKLLEDKLEAGCAPLALWQAATQNLLPTDSLLPPP
                     IDGLMNGLPLAHELLAHVRNPDAQPHSINLTQLPISEADRLFLSRLCGPGNIQIRTIG
                     YGESYINATGLRHVWHLRCTDTLKGPLLESYEICPIPEVVLAAPEDLVDSAQRLSEVC
                     QWLAEAAPT"
     gene            33847..35391
                     /gene="appC"
                     /locus_tag="JN001_000452"
     CDS             33847..35391
                     /gene="appC"
                     /locus_tag="JN001_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit 1"
                     /protein_id="HAY9051789.1"
                     /translation="MWDVIDLSRWQFALTALYHFLFVPLTLGLIFLLAIMETIYVVTG
                     KTIYRDMTRFWGKLFGINFALGVATGLTMEFQFGTNWAFYSNYVGDIFGAPLAMEALM
                     AFFLESTFVGLFFFGWQRLNKYQHLLVTWLVAFGSNLSALWILNANGWMQYPTGAHFD
                     IDTLRMEMTSFSELVFNPVSQVKFVHTVMAGYVTGAMFIMAISAWYLLRGRERDVALR
                     SFAIGSVFGTLAIIGTLQLGDSSAYEVAQVQPVKLAAMEGEWQTEPAPAPFHVVAWPE
                     QDQERNAFAIKIPALLGILATHSLDKPVPGLKNLMAETYPRLQRGRMAWLLMQEISQG
                     NREPHVLQAFRELEGDLGYGMLLSRYAPDMNHVTAAQYQAAMRGAIPQVAPVFWSFRI
                     MVGCGSLLLLVMLIALVQTLRGKIDQHRWVLKMALWSLPLPWIAIEAGWFMTEFGRQP
                     WAIQDILPTYSAHSALTTGQLAFSLIMIVGLYTLFLIAEVYLMQKYARLGPSAMQSEQ
                     PTQQQG"
     gene            35403..36539
                     /gene="appB"
                     /locus_tag="JN001_000453"
     CDS             35403..36539
                     /gene="appB"
                     /locus_tag="JN001_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY9051790.1"
                     /translation="MFDYETLRFIWWLLIGVILVVFMISDGFDMGIGCLLPLVARNDD
                     ERRIVINSVGAHWEGNQVWLILAGGALFAAWPRVYAAAFSGFYVAMILVLCSLFFRPL
                     AFDYRGKIADARWRKMWDAGLVIGSLVPPVVFGIAFGNLLLGVPFAFTPQLRVEYLGS
                     FWQLLTPFPLLCGLLSLGMVILQGGVWLQLKTVGVIHLSSQLATKRAALLVMLCFLLA
                     GYWLWVGIDGFVLLAQDANGPSNPLMKLVAVLPGAWMNNFVESPVLWIFPLLGFFCPL
                     LTVMAIYRGRPGWGFLMASLMQFGVIFTAGITLFPFVMPSSVSPISSLTLWDSTSSQL
                     TLSIMLVIVLIFLPIVLLYTLWSYYKMWGRMTTETLRRNENELY"
     gene            36552..36644
                     /gene="cbdX"
                     /locus_tag="JN001_000454"
     CDS             36552..36644
                     /gene="cbdX"
                     /locus_tag="JN001_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-II oxidase subunit CbdX"
                     /protein_id="HAY9051791.1"
                     /translation="MWYLLWFVGILLMCSLSTLVLVWLDPRLKS"
     gene            36724..38022
                     /locus_tag="JN001_000455"
     CDS             36724..38022
                     /locus_tag="JN001_000455"
                     /EC_number="3.1.3.2"
                     /EC_number="3.1.3.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AppA family phytase/histidine-type acid
                     phosphatase"
                     /protein_id="HAY9051792.1"
                     /translation="MKAILIPFLSLLIPLTSQSAFAQSEPELKLESVVIVSRHGVRAP
                     TKATQLMQDVTPDAWPTWPVKLGWLTPRGGELIAYFGHYQRQRLVADGLLAKKGCPQP
                     GQVAIIADVDERTRKTGEAFAAGLAPDCAITVHTQADTSSPDPLFNPLKTGVCQLDNA
                     NVTDAILSRAGGSIADFTGHRQTAFRELERVLNFPQSNLCLKREKQDESCSLTQALPS
                     ELKVSADNVSLTGAVSLASMLTEIFLLQQAQGMPEPGWGRITDSHQWNTLLSLHNAQF
                     YLLQRTPEVARSRATPLLDLIMAALTPHPPQKQAYGVTLPTSVLFIAGHDTNLANLGG
                     ALELNWTLPGQPDNTPPGGELVFERWRRLSDNSQWIQVSLVFQTLQQMRDKTPLSLNT
                     PPGEVKLTLAGCEERNAQGMCSLAGFTQIVNEARIPACSL"
     gene            complement(38137..40317)
                     /gene="etk"
                     /locus_tag="JN001_000456"
     CDS             complement(38137..40317)
                     /gene="etk"
                     /locus_tag="JN001_000456"
                     /EC_number="2.7.10.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein kinase"
                     /protein_id="HAY9051793.1"
                     /translation="MTTKNMNTPPGSTQENEIDLLRLVGELWDHRKFIISVTALFTLI
                     AVAYSLLSTPIYQADTLVQVEQKQGNAILSGLSDMIPNSSPESAPEIQLLQSRMILGK
                     TIAELNLRDIVEQKYFPIVGRGWARLTKEKPGELAISWMHIPQLNGQDQQLTLTVGEN
                     GHYTLEGEEFTVNGMVGQRLEKDGVALTIADIKAKPGTQFVLSQRTELEAINALQETF
                     TVSERSKESGMLELTMTGDDPQLITRILNSIANNYLQQNIARQAAQDSQSLEFLQRQL
                     PEVRSELDQAEEKLNVYRQQRDSVDLNLEAKAVLEQIVNVDNQLNELTFREAEISQLY
                     KKDHPTYRALLEKRQTLEQERKRLNKRVSAMPSTQQEVLRLSRDVEAGRAVYLQLLNR
                     QQELSISKSSAIGNVRIIDPAVTQPQPVKPKKALNVVLGFILGLFISVGAVLARAMLR
                     RGVEAPEQLEEHGISVYATIPMSEWLDKRTRLRKKNLFSNQQRHRTKNIPFLAVDNPA
                     DSAVEAVRALRTSLHFAMMETENNILMITGATPDSGKTFVSSTLAAVIAQSDQKVLFI
                     DADLRRGYSHNLFTVSNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVPPNPSEL
                     LMRDRMRQLLEWANDHYDLVIVDTPPMLAVSDAAVVGRSVGTSLLVARFGLNTAKEVS
                     LSMQRLEQAGVNIKGAILNGVIKRASTAYSYGYNYYGYSYSEKE"
     gene            complement(40337..40783)
                     /gene="etp"
                     /locus_tag="JN001_000457"
                     /gene_synonym="yccY"
     CDS             complement(40337..40783)
                     /gene="etp"
                     /locus_tag="JN001_000457"
                     /gene_synonym="yccY"
                     /EC_number="3.1.3.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-tyrosine-phosphatase Etp"
                     /protein_id="HAY9051794.1"
                     /translation="MAQLKFNSILVVCTGNICRSPIGERLLRKRLPGVKVKSAGVHGL
                     VKHPADATAADVAANHGVSLEGHAGRKLTAEMARNYDLILAMESEHIAQVTAIAPEVR
                     GKTMLFGQWLEQKEIPDPYRKSQDAFEHVYGMLERASQEWAKRLSR"
     gene            complement(40771..41910)
                     /locus_tag="JN001_000458"
     CDS             complement(40771..41910)
                     /locus_tag="JN001_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide export protein"
                     /protein_id="HAY9051795.1"
                     /translation="MKKNIFKFSVLTLAVLSLTACTLVPGQNLSTRNKDVIELPDNQY
                     DLDKMVNIYPVTPGLIDQLRAKPIMSQANPELEQQIANYEYRIGIGDVLMVTVWDHPE
                     LTTPAGQYRSASDTGNWVNADGAIFYPYIGRLKVAGKTLTQVRNEITARLDSVIESPQ
                     VDVSVAAFRSQKAYVTGEVSKSGQQPITNIPLTIMDAINAAGGLTADADWRNVVLTQN
                     GVKTKVNLYALMQRGDLRQNKLLHPGDILFIPRNDDLKVFVMGEVGKQSTLKMDRSGM
                     TLAEALGNAEGMNQDVADATGIFVIRATQNKQNGKIANIYQLNAKDASAMILGTEFQL
                     EPYDIVYVTTAPLARWNRVISLLVPTISGVHDLTETSRWIQTWPN"
     gene            complement(41956..44052)
                     /locus_tag="JN001_000459"
     CDS             complement(41956..44052)
                     /locus_tag="JN001_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY9051796.1"
                     /translation="MKKNSYLLSCLAIAVSSACHAEVLTYPDPLGSSQSDFGGTGLLQ
                     MPNARIAPEGEFSVNYRDNDQYRFYSTSVALFPWLEGTIRYTDVRTRKYSQWEDFSGD
                     QSYKDKSFDFKLRLWEEGYWLPQVAFGKRDIAGTGLFDGEYLVASKQAGPFDFTLGMA
                     WGYAGNAGNITNPFCRVNDKYCHRAESHDAGDISFSDIFRGPASIFGGIEYQTPWNPL
                     RLKLEYDGNNYQNDFAGKLPQASHFNVGAVYRAASWADLNLSYERGNTLMFGFTLRTN
                     FNDLRPALRDTPKPAYQPAPESEGLQYTTVANQLTALKYNAGFEAPEIQLRDKTLYMS
                     GQQYKYRDSREAVDRANRILVNNLPQGVEKISVTQKREHMAMVTTETDVASLRKQLAG
                     TAPGQSEQLQQQRVEAEDLSAFGRGYRIREDRFSYSFNPTLSQSLGGPEDFYMFQLGL
                     MSSARYWFTDHLLLDGGIFTNIYNNYDKFKSSLLPADSTLPRVRTHIRDYVRNDVYLN
                     NLQANYFADLGNGFYGQVYGGYLETMYAGVGSELLYRPLDASWALGVDVNYVKQRDWD
                     NMMRFTDYSTPTGFVTAYWNPPTLNGVLMKLSVGQYLAKDKGATIDVAKRFDSGVAVG
                     VWAAISNVSKDDYGEGGFSKGFYISIPFDLMTIGPNRNRAVVSWTPLTRDGGQMLSRK
                     YQLYPMTAEREVPVGQ"
     gene            complement(44052..44798)
                     /locus_tag="JN001_000460"
     CDS             complement(44052..44798)
                     /locus_tag="JN001_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
                     /protein_id="HAY9051797.1"
                     /translation="MNKLQSYFIASVLYVMTPHAFAQGTVTIYLPGEQQTLSVGPMEN
                     VVQLVTQPQLRDRLWWPGALLTDSAAKAKALKDYQHVMAQLASWEAEADDDVAATIKS
                     VRQQLLNLNITGRLPVKLDPDFVRVDENSNPPLVGDYTLYTVQRPVTITLLGAVSGAG
                     QLPWQAGRSVTDYLQDHPRLAGADKNNVMVITPEGETVVAPVALWNKRHVDPPPGSQL
                     WLGFSAHVLPEKYADLNDQIVSVLTQRVPD"
     gene            complement(44795..45439)
                     /gene="gfcB"
                     /locus_tag="JN001_000461"
     CDS             complement(44795..45439)
                     /gene="gfcB"
                     /locus_tag="JN001_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein GfcB"
                     /protein_id="HAY9051798.1"
                     /translation="MRPLILSIFALFLAGCTHSQQSMVDTFRASLFDNQDITVADQQI
                     QALPYSTMYLRLNEGQRIFVVLGYIEQEQSKWLSQDNAMLVTHNGRLLKTVKLNNNLL
                     EVTNSGQDPLRNALAIKDGSRWTRDILWSEDNHFRSATLSSTFSFAGLETLNIAGRNV
                     LCNVWQEEVTSTRPEKQWQNTFWVDSATGQVRQSRQMLGAGVIPVEMTFLKPAP"
     gene            complement(45546..45851)
                     /locus_tag="JN001_000462"
     CDS             complement(45546..45851)
                     /locus_tag="JN001_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-rich inner membrane protein GfcA"
                     /protein_id="HAY9051799.1"
                     /translation="MKHKLSAILMAFMLTTPAAFAAPEATNGTEATTGTTGTTTTTTG
                     ATTTATTTGGVAAGAVGTATVVGVATAVGVATLAVVAANDSGDGGSHNTSTTTSTTR"
     gene            complement(46293..46505)
                     /gene="cspH"
                     /locus_tag="JN001_000463"
     CDS             complement(46293..46505)
                     /gene="cspH"
                     /locus_tag="JN001_000463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock-like protein CspH"
                     /protein_id="HAY9051800.1"
                     /translation="MSRKMTGIVKTFDRKSGKGFIIPSDGRKEVQVHISAFTPRDAEV
                     LIPGLRVEFCRVNGLRGPTAANVYLS"
     gene            46791..47003
                     /gene="cspG"
                     /locus_tag="JN001_000464"
     CDS             46791..47003
                     /gene="cspG"
                     /locus_tag="JN001_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock protein CspG"
                     /protein_id="HAY9051801.1"
                     /translation="MSNKMTGLVKWFNADKGFGFITPDDGSKDVFVHFTAIQSNEFRT
                     LNENQKVEFSIEQGQRGPAAANVVTL"
     gene            47014..47202
                     /locus_tag="JN001_000465"
     CDS             47014..47202
                     /locus_tag="JN001_000465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY9051802.1"
                     /translation="MTQHLHFRCPCCHGSQYRTSAFDVTERNPLGAKCIFCKSTMITF
                     DNVTLQIRTDHAPLDFTK"
BASE COUNT        11625 a        11731 c        12413 g        11448 t
ORIGIN      
        1 tagcgatgtg cagtcgggta aagtgaatgc cagcgcgaca tttgtacttc attatgacta
       61 atacgtggaa cagattggcg ctcttgattt tcgccgtttt atcgctgctg gtggcgggtg
      121 aattgcgggc aggagtggtg gtcggcggaa cgcgatttat ctttccggca gacagagaat
      181 cgatatctat tttactggct aataccagtc aggaatcctg gctgattaac agtaaaatca
      241 accgcccaac gcgttgggcc ggggggaaag cgtcgacagt gccagcacca ttactggccg
      301 ctccgccact tattctcctg aagcccggta ctacaggcac gttgcgcttg ctgagaacgg
      361 aaagcgacat cttgcctgtg gatcgcgaaa cgctatttga gttaagcatt gccagcgtgc
      421 catccggcaa agttgaaaat cagagcgtaa aagtggcgat gcgctcggta tttaaactgt
      481 tctggcgacc cgaaggtttg ccgggcgacc cgctggaagc ttatcaacaa ttacgctgga
      541 cacggaattc gcagggtgta caactcacta acccaacgcc ttactacatt aacctgattc
      601 aggtgagcgt aaatggtaaa gcgttaagta atgcgggagt tgtgccgcct aaaagccagc
      661 gtcagacaag ctggtgtcag gcaatcgcac cgtgtcatgt cgcctggcgg gcgataaatg
      721 attacgacgg gttgagtgca aagaaggagc aaaatctgcc ctgaaacagg ttcggaaaac
      781 gtttgcgttt tttttgccgc aggtcaattc ccttttggtc cgaactcgca cataatacgt
      841 ccccggtttg cacaccggga atccaggaga gttcatgtac taccccttcg ttcgtaaagc
      901 ccttttccag ctcgatccag agcgcgctca tgagtttact tttcagcaat tacgccgtat
      961 tacaggaacg ccgtttgaag cactggtgcg gcagaaagtg cctgcgaaac ctgttaactg
     1021 catgggcctg acgtttaaaa atccgcttgg tctggcagcc ggtcttgata aagacgggga
     1081 gtgcattgac gcgttaggcg cgatgggatt tggatcgatc gagatcggta ccgtcacgcc
     1141 acgtccacag ccaggtaatg acaagccgcg tctctttcgt ctggtagatg ccgaaggttt
     1201 gatcaaccgt atgggcttta ataatcttgg cgttgataac ctcgtagaga acgtaaaaaa
     1261 ggcccattat gacggcgtcc tgggtattaa catcggcaaa aataaagata cgccagtgga
     1321 gcagggcaaa gatgactatc tgatttgtat ggaaaaaatc tatgcctatg cgggatatat
     1381 cgccatcaat atttcatcgc cgaatacccc aggattacgc acgctgcaat atggtgaagc
     1441 gctggatgat ctcttaaccg cgattaaaaa taagcaaaat gatttgcaag cgatgcacca
     1501 taaatatgtg ccgatcgcag tgaagatcgc gccggatctt tctgaagaag aattgatcca
     1561 ggttgccgat agtttagttc gccataatat tgatggcgtt attgcaacca ataccacact
     1621 cgatcgttct cttgttcagg gaatgaaaaa ttgcgatcaa accggtggct taagtggtcg
     1681 tccgcttcag ttaaaaagca ccgaaattat tcgccgcttg tcactggaat taaacggtcg
     1741 cttaccgatc atcggtgttg gcggcatcga ctcggttatc gctgcgcgtg aaaagattgc
     1801 tgcgggtgcc tcactggtgc aaatttattc tggttttatt tttaaaggtc cgccgctgat
     1861 taaagaaatc gttacccata tctaattatt tcttcgaatt cctctttata agataatcag
     1921 ggctttattt tcagccctgg ttgttttata ttcatcgctg ttgcttattt agacattttg
     1981 tacttttatt gttgaggtta ttaagcgaag cgacaatgga ttgtgttgct gcggttttat
     2041 agggtagggg agaggcagat gcgaattaaa ccagacgata actggcgttg gtattacgat
     2101 gaagagcacg atcgaatgat gctcgattta gccaatggta tgctatttcg ctcacgtttt
     2161 gcgcgcaaga tgttgactcc agatgccttt tctcccgcag gcttttgcgt tgacgacgcc
     2221 gcgctctatt tctcttttga agaaaagtgc cgcgatttta atttatctaa agaacaaaaa
     2281 gccgaactgg tgctgaatgt actggtagca attcgctatc tcaaaccgca aatgccgaaa
     2341 agctggcatt ttgtttccca tggtgaaatg tgggtgccca tgccgggcga tgcggcctgc
     2401 gtttggttga gcgatactca cgagcaggtc aatttgctgg tcgttgaatc tggcgaaaat
     2461 gccgcactat gcctgctggc acaaccctgc gttgttattg cgggtcgcgc gatgcagttg
     2521 ggcgacgcca ttaaaatcat gaacgacagg ctgaaaccgc aggttaatgt tgacagcttc
     2581 agcctcgaac aggcagtcta acgcgccaac ttaagtgcag tcttcggtac acagctacag
     2641 caaagaatgg tgccatcatc gcccattgct gattttttca gcggcgagac ttcgccttct
     2701 aaaatctgaa cacggcaact tccacaaatg cccgcgcggc aagaataagg gatacgaatt
     2761 ccctgatttt ctaattgctc cagcaacacc tgttggttat ttccacgaaa tgcctgtccc
     2821 tgccagtcaa tatctacatt tgcgtccggt tgttgcgtga tgttggcggt atcatcagcg
     2881 gcagctgcgc cgtaaatttt tgccggagcc gttgccagaa tttccacctc atcgccaacg
     2941 cgaatcacgc cgctattacg ggcaattaaa ttctgaccaa aatcgacatc gccgttatcc
     3001 tgggcagtgc ggaaagattg caatgttttt aatggttcgc ctgccggatg tttttgccct
     3061 ttttctgggc tgacggtggt gaaaatacag cggctacaag gtttaaccac atcaaacacc
     3121 acatcaccaa tgcgaatcac tttccagcga tcttcttccc aggctgacgc gccggaaacc
     3181 accagattgg ggcggaattg ctccattttt acactggccg gacaacgttg ttggagatca
     3241 cgtaacgagg cttcgttagc aagaaggtaa ggatagccat cagcaaatga cagaggtaca
     3301 gtgttgtggc gtttcacgcg ccgggtcatt tgtggcccca cccagcgtaa ttgcacttcg
     3361 cgggagaaaa atccacttag ccatttgttg atcgcgtctg gcgcaattcg cgcggtaaaa
     3421 tgtgtgcccc aaacttcggt tggtgcgtct tgtgtggcga aatcagcaaa acgaacatat
     3481 gcgctactgc catctggtgc ggtgagatgc aagccatcat gcacaggtga aggagtaaac
     3541 cgtaccatct ggggaaactg gcgagcggta ataaacgtac cgtcaggttc cgtgatcata
     3601 aagatgcgat cgaaggccag accactgaca tcagccagag catgtgtaag accaatgccg
     3661 cgcatcgatt taacaggatg aataaaaagc cgggttaatg tcgccacggt gcggtcctca
     3721 aatgaaaata agccctcaac tttatgacat gacgcgctta ttagctataa tgcgcaacaa
     3781 ttttcttagc gcctgtccca ttaggctatt ttatttgtca gtttggccct gggttgtgct
     3841 cgaaatcctc acgtacttgt gtacgctccg gtttctccgc gctgtccatg tccagactga
     3901 ctgcaacaat tacgcctact gcggtaggct cttagagtaa aagtgacgat atgaattctc
     3961 tgtttgccag tacggcccgt gggctggaag agctgttaaa aactgaactg gaaaacctgg
     4021 gggccgttga atgccaggtg gttcagggtg gggtccattt caagggcgac acacggcttg
     4081 tttaccagag cctgatgtgg agccgcctgg cctcgcgtat tatgttgccg ctgggcgagt
     4141 gtaaggttta cagcgattta gacctctatc tcggtgttca ggcgatcaac tggacagaga
     4201 tgtttaatcc tggcgcgacc ttcgctgtcc acttcagtgg tttgaatgac accatccgca
     4261 acagtcagta cggcgcgatg aaagtgaaag acgcgatcgt cgatgctttc acgcggaaaa
     4321 atctgccgcg tccaaatgtt gatcgcgatg cgccggatat ccgcgttaac gtctggctgc
     4381 ataaagaaac cgccagtatc gctcttgatc tgagtggtga tggtttacat ctgcgtggct
     4441 atcgcgatcg tgctggtatt gcgccgctca aagaaaccct ggcagccgct attgtgatgc
     4501 gatccggctg gcagcctgga acaccgctgc tcgatccgat gtgtggttcc ggtacgttgc
     4561 tgattgaagc ggcgatgctg gcgaccgatc gcgcacccgg cttgcaccgt gggcgttggg
     4621 gctttagcgg ctgggcgcag catgatgaag ctatctggca ggaagtgaaa gcggaagcgc
     4681 aaactcgcgc ccgtaaaggc ctggctgagt atagctctca tttttacggt tcggacagcg
     4741 acgcacgggt gattcaacgt gcacgcacta acgcccgtct tgcggggatt ggtgaactga
     4801 tcacctttga ggtgaaagat gtcgcgcaac tgaccaatcc gctgccgaaa gggccgtacg
     4861 gcacagtgtt gagcaacccg ccatacgggg aacgtctgga cagcgaaccg gcgctgattg
     4921 cgctgcatag cctgctgggt cggatcatga aaaaccagtt tggtggctgg aatctctctt
     4981 tgtttagtgc ctcgccggat ctgctaagct gcttgcagct gcgtgcagac aaacagtaca
     5041 aggcgaaaaa cggcccgctg gactgcgtac agaaaaatta ccacgttgcc gaaagcactc
     5101 cagacagcaa accggcgatg gtagcggaag actacgccaa ccgcctgcgt aagaacctca
     5161 aaaaattcga gaagtgggct cgccaggaag gaattgaatg ttaccgcctg tatgacgccg
     5221 atctgccgga atataacgtt gccgttgacc gttattccga ctgggtggtg gtgcaggagt
     5281 atgcaccgcc aaaaactatt gatgctcaca aagcgcgtca gcgtctgttc gatattatcg
     5341 ctgcaaccat ttcggtactg gggattgcgc caaacaaact ggtgctgaaa acccgtgaac
     5401 gccagaaggg caaaaaccag taccagaaac tgggcgagaa gggcgagttt cttgaagtta
     5461 ccgaatataa cgctcacttg tgggtgaacc tgacggatta tctcgatact ggtctgttcc
     5521 tcgatcaccg tatcgcccgc cgtatgctcg gtcagatgag caaaggcaaa gatttcctca
     5581 acctgttctc ttataccggt agcgccaccg tgcatgcggg attaggcggc gcgctcagca
     5641 ccaccaccgt ggatatgtcg cgtacttatc tggagtgggc agaacgcaac ctgcgtctga
     5701 atggcctaac cgggcgtgcg catcgcctga ttcaggccga ttgcctggcg tggctgcgtg
     5761 aggcaaatga acagtttgat ctgatcttta tcgatccgcc aaccttctct aactcaaaac
     5821 gaatggaaga tgcgtttgat gttcagcgcg atcatctggc gctgatgaaa gatttgaaac
     5881 gtctgctgcg tgcaggtggg acgatcatgt tctcgaacaa caaacgtggc ttccgtatgg
     5941 atctcgacgg cctggcaaaa ctgggactga aagcacaaga aattacgcaa aaaacgctct
     6001 cccaggattt cgcccgtaac cgccagatcc acaactgctg gctgattacc gcagcctgaa
     6061 aggaatagta atgtcattaa tcagtatgca tggcgcatgg ctgtcgttca gcgacgcgcc
     6121 gcttctcgat aacgcagaac tgcatatcga agataacgaa cgtgtttgtc tggtgggccg
     6181 caacggcgcg ggcaaatcga cgttaatgaa aatcctcaac cgtgaacaag ggctggatga
     6241 cggtcgcatt atttacgagc aagatttgat tgtagctcgt ctgcaacagg atccgccgcg
     6301 taacgttgag ggtagcgttt atgatttcgt tgccgaaggc attgaagaac aagcggaata
     6361 tctgaaacgc tatcacgata tttcgcgcct ggtgatgaac gacccgagcg agaaaaatct
     6421 caacgaactg gcgaaggttc aggaacagtt ggatcaccac aacctgtggc agctggaaaa
     6481 ccgcatcaac gaagtgctgg cgcaactggg gttagatcct aatgttgcgc tgtcgtcgct
     6541 ttccggcggc tggttgcgta aagcggcatt aggacgcgcg ctggtgagta atccgcgcgt
     6601 gctgttgctt gatgaaccga caaaccacct ggatattgaa accatcgact ggctggaagg
     6661 gttccttaaa accttcaatg ggacgattat tttcatctcc cacgaccgtt cgtttatccg
     6721 caatatggcg acgcgcattg ttgatctcga tcgcggcaag ctggtgacct atccagggaa
     6781 ttacgaccag tacctgcttg aaaaagaaga agccctgcgc gtggaagaac tacaaaatgc
     6841 cgagttcgat cgcaaactgg cgcaggaaga ggtgtggatc cgccagggga tcaaagcacg
     6901 ccgtacccgt aatgaaggcc gcgtacgcgc cctgaaagca atgcgtcgcg agcgtggtga
     6961 acgtcgcgaa gtgatgggta ccgcaaagat gcaggtggaa gaggccagcc gctccggtaa
     7021 gatcgttttc gaaatggaag acgtttgcta ccaggttgac ggtaagcaac tggtgaaaga
     7081 tttttcggcc caggttctac gtggcgacaa aattgtcctg attggtccga atgggtgcgg
     7141 caaaaccacg ctgctgaaac tgatgctcgg tcagcttcaa gcggacagcg ggcgtattca
     7201 cgttggcacc aaactggaag tggcttattt cgatcagcac cgcgcggaac tggatcccga
     7261 taaaacggtg atggataaca ttgccgaagg taagcaagag gtgatggtta acggcaagcc
     7321 acgccacgta ttgagctatt tgcaggactt tctgttccat ccgaaacggg cgatgacgcc
     7381 ggtacgtgcg ctttctggcg gtgagcggaa ccgcttgctg ctggcgcgtt tgttcctcaa
     7441 accaagcaac ttattgattc ttgacgaacc gaccaacgat cttgatgtcg aaacgctgga
     7501 actgctggaa gaactgatcg acagctatca gggcacggta ttgctggtta gccacgatcg
     7561 tcagtttgtc gataacaccg ttacagaatg ttggatcttc gaaggcggcg gtaaaattgg
     7621 tcgttatgtc ggcggttatc atgatgcccg tggtcagcaa gagcagtatg tggcgctcaa
     7681 acagcctgcg gtgaaaaaaa ccgaagaagc cgccgcggca aaagcagaaa ctgtaaaacg
     7741 cagcagtagc aaactaagct ataaattgca gcgcgaactg gagcagctac cgcaattgct
     7801 cgaagatctg gaggcgaagc tggaagccct acagacgcag gtggcggatg cttccttctt
     7861 cagtcagcca catgagcaga cacaaaaagt gctcgccgat atggctgctg cagagcagga
     7921 gctggagcaa gcctttgaac gctgggagta tcttgaagcg ttaaaaaatg gtggctgatc
     7981 gcaaaatagt cgatttaaac agagacagct gacaacggta aaattgcctg atgaactggg
     8041 tttatcaggc atgaaaacca acactttgtt agtcatctgt aaaatagcgc atcattaagg
     8101 agtaccaatg tgcgaacatc atcatgccgc gaagcacatc ctgtgctcgc agtgtgacat
     8161 gctggtggcg ttaccgcgcc ttgagcatgg tcagaaagcg gcatgtcccc ggtgtggcac
     8221 aacgttaacc gtggcgtggg atgcccctcg gcagcgtccg accgcctatg cgttggctgc
     8281 actgttcatg ctgttgctgt ccaacttgtt tccttttgtg aatatgaacg ttgcaggagt
     8341 taccagtgaa attacattac tggaaattcc cggcgtgctt ttttctgagg actacgccag
     8401 cctcggcacc tttttcctgt tgtttgtgca actggttccc gcgttttgtc tgataaccat
     8461 tctgttactg gtgaatcgcg cggaattacc ggtccgttta aaagagcaac tggcacgggt
     8521 gctttttcaa ctcaaaacct ggggaatggc ggagattttc ctcgcgggtg tgctggtcag
     8581 tttcgttaaa ctgatggctt acggcagcat tggggtaggc agcagctttc tcccctggtg
     8641 tttattttgt gtcctgcaac tgcgcgcttt tcagtgcgtt gatcgtcgct ggttatggga
     8701 cgacatcgcc ccgatgccag aactgcgcca gccgctaaaa ccaggcgtca cggggatacg
     8761 tcaggggctg cgttcgtgct cctgttgtac ggcaatcctt cctgctgatg aacccgtgtg
     8821 cccgcgttgt agtaccaaag ggtacgttcg gcgtagaaac agcctgcagt ggacactcgc
     8881 gctgcttgta acgtccatca tgctgtatct tccggctaat attttgccca tcatggtgac
     8941 ggatttatta ggctcgaaga tgccgtcgac gattctcgct ggggtcattc tgttatggag
     9001 cgaaggctct tatcccgtcg ctgcggtgat ctttctggcc agtattatgg tgccaacgtt
     9061 aaagatgatc gccatcgcgt ggctgtgttg ggatgccaaa gggcatggca agcgcgacag
     9121 tgaaagaatg catttgattt atgaagttgt tgagtttgta ggccgctggt cgatgattga
     9181 cgttttcgtt atcgcggtgc tctcggcgct ggtgcgtatg ggaggtttaa tgagtattta
     9241 tccggcaatg ggtgcattaa tgtttgcttt agtcgtcata atgacaatgt tttctgctat
     9301 gacgtttgac ccgcgtttgt cgtgggatcg tcaacctgaa tcagagcatg aggagtcctg
     9361 acagtatgga atctaataat ggggaagcca aaatccagaa agtgaagaac tggtctcccg
     9421 tgtggatatt tcctatcgtc acggcgctca ttggggcctg ggttctattt tatcattaca
     9481 gccatcaggg accggaagtg accctgatca ccgcgaatgc ggaaggaatt gaaggtggca
     9541 aaaccaccat taaaagccgt agcgttgacg tcggcgtggt tgaaagcgcc acactggctg
     9601 atgatttgac gcacgttgaa atcaaagcgc ggctgaattc cggtatggaa aaattgctgc
     9661 ataaagacac cgtcttttgg gtggtgaaac cgcagattgg tcgcgaaggg attagcggcc
     9721 tgggaacgct gctgtctgga gtttatatcg aactgcagcc aggcgcgaaa ggcagcaaaa
     9781 tggataaata cgatttgctg gactcgccac cgttggcccc gcctgatgcg aaaggtatcc
     9841 gtgtgattct cgatagcaaa aaagccgggc agctctcgcc aggagatccg gtgctgttcc
     9901 gtggctatcg ggtaggttcg gttgaaacca gcaccttcga tacgcaaaaa cgcaatatca
     9961 gttatcaact gttcatcaat gcaccttatg accgactggt gaccagcaat gttcgcttct
    10021 ggaaagatag tggcattgcg gttgatctga cgtcagcggg gatgcgtgtg gagatgggct
    10081 cattgacaac gctgcttagt ggcggtgtta gctttgatgt gccggaaggt ctggatttag
    10141 ggcagccagt ggcaccgaaa acagctttcg ttttgtatga tgatcagaag agcattcagg
    10201 attcgttgta caccgatcac attgattatc tgatgttctt taaagattcg gtacgcggtc
    10261 tgcaaccggg agctccggta gaattccggg gtattcgcct gggtaccgta agcaaagtgc
    10321 cattctttgc gccgaatatg cgtcagacat ttaacgatga ttaccgtatt ccggtactga
    10381 ttcgtatcga gccagagcgg ctgaaaatgc agcttggcga aaatacggat gttgttgagc
    10441 accttggcga attgttgaaa cgtggtttac gcggatcgct gaaaaccgga aacctggtca
    10501 ctggtgcact gtatgttgat ctcgatttct atccaaatac gcctgcaata accggtattc
    10561 gtgaatttaa tggttatcag attatcccga ctgttagcgg cggcctggcg caaatccagc
    10621 aacgactgat ggaagcgttg gataagatca acaaactgcc attgaatccg atgattgaac
    10681 aggcaaccag tacgctttct gaaagtcagc gcacaatgaa aaacctgcaa acgacgctgg
    10741 atagcatgaa caagatcctc gctagccagt cgatgcagca gttgccgacg gatatgcagt
    10801 caacgttgcg tgaattgaat cgcagcatgc agggcttcca gcctggctcc gcagcctaca
    10861 acaagatggt ggcggatatg cagcgccttg atcaggtgtt gcgagaactg caaccggtgc
    10921 tgaaaacgct caatgagaag agtaacgcgc tggtatttga agcgaaggac aaaaaagatc
    10981 cagagccgaa gagggcgaaa caatgaaaaa gtggctagtg acgattgcag cactgtggct
    11041 ggccggatgc agctccggcg aaattaataa aaactattac cagttacctg tggtgcagag
    11101 cggtacacaa agtaccgcca gccagggcaa tcgtctgtta tgggtagagc aggtcactgt
    11161 tcctgactat ctggcgggga atggtgtggt ttatcaaacc agtgatgtga agtatgtgat
    11221 tgccaacaac aacttgtggg ccagcccgtt ggatcaacag ttgcgcaaca ccctggttgc
    11281 caacctgagt acgcaactgc ccggctgggt ggttgcctcc cagcctctgg gaagcgtcca
    11341 ggacacgctc aatgttaccg taacggagtt taacggtcgc tatgatggca aggtcattgt
    11401 cagtggtgag tggctgttga accaccaggg acaactgatc aaacgtccgt tccgtctgga
    11461 aggagtgcaa actcaggatg gttacgatga gatggttaaa gtgctggccg gtgtctggag
    11521 tcaggaagcc gcttctattg cacaagagat aaagcgtcta ccttaattat aaagatttgt
    11581 aagtataacc gtctccggta tgttgcctga ggcggttttt ttgtttctaa cgtgcggaaa
    11641 aatttgttcc tcttcacatt ttttgtacaa ccgacatgcc cgtgtagctc acaaatatga
    11701 cagtggcgtg aattttgcgc attgacggca gttatgattc gcggtattgc ttaactgtga
    11761 ttgcacattt agtaatcact gttttctttt ccaccagaaa ccagtatgag ggaaacgagg
    11821 catgaagaga caaaaacgag atcgcctgga acgggcacat caacgtggtt atcaggccgg
    11881 catcgccgga cgctcaaaag aaatgtgtcc ctatcagacg ctgaatcaaa ggtcacaatg
    11941 gctgggaggc tggcgagaag ccatggcgga cagggtagta atggcctgat tctgtctctt
    12001 taaaaagaaa cctccgcatt gcggaggttt cgccttttga tactctgtct gatgataatc
    12061 agaaggcaga cgtatcctgg aacagaccga ctttcaggtc gctggcggta tagatcagac
    12121 gaccatcaac cagcacttcg ccatctgcca gacccataat cagacgacga ttaacaatgc
    12181 gtttaaagtg aatacggtag gtcacttttt tcgctgtcgg cagtacctga ccagtgaatt
    12241 tcacttcgcc aacgcccagc gcgcggcctt taccttcgcc gcccagccag ccgaggtaga
    12301 accctactag ctgccacatt gcgtccaggc ccaggcatcc cggcataacc ggatcgccaa
    12361 tgaagtggca tccgaagaac cacagatccg gattgatatc cagttctgct tcaacatacc
    12421 ctttgtcgaa gttaccaccc gtttcggtca ttttgaccac acggtccatc atcagcatgt
    12481 tcggtgctgg caattgcggg cctttagcgc caaacagttc accgcgacca gaggcaagaa
    12541 ggtcttcttt tgtataggat tcgcgtttat ctaccatgtt ctctgtaagc cttattttat
    12601 tgaagcacgc aggatagcta acacgtgtac gctgaacaag tccgatcagt tcggaataaa
    12661 ccagttcagc caacgtaatg gccatggaaa acggtgacgt ccttcctgtt gcgatgcttg
    12721 cgcgatacgt tcctggatgg tttgcatcag cgtcgtttgg ccttcgccat cccacaccag
    12781 atttaataat aacggcagtg cgtcagtcac atcgtctact gcccagatgg tgaatttgcc
    12841 ttcttctacc gctttcacca gttcactgtg aagacttaaa tggcgaacgt tagctgtggg
    12901 gataatgaca ccttgtttcc cggttaactc acgttgctgg caaatagcaa agaagccttc
    12961 gattttctca tttaaaccac cgaccggctg ggcgcgaccg aactgatcga ctgaacctgt
    13021 gatagcgata ctctgattca ccggcacatc ggcgagggcg cttatcaggg cgcagagttc
    13081 agccatcgag gcactatctc catcaacttc actgtatgac tgctcaaatg tcagcgatgc
    13141 tgagaagggg atctgttgct caagctgtag ttccgacatc aggaacgctt gcatgatcat
    13201 catccctttc gcatggatat tgccgccaag ttccgctttg cgttcgatgt cggtgaattc
    13261 accatcgcca atatgcacaa cgcagctaat gcgagaaggt tcgccaaaag cgcgtggatg
    13321 acccggaaat tcaatgaccg aaagggcgtt aatttgcccg atgcgttcgc cttcggtttc
    13381 aatcaggatt tgctcctgaa ggatctcatc ctgcatacgt tcagcgagga aaccttcgcg
    13441 ccattcacgc tgctgcagca ttaagtttag ctgctcgccg gagaaggtgt cgccatcaca
    13501 cagggaggcg acctctttac actggcggag gatccactgc gggctaagcg gaagtgtttc
    13561 ttgttcaccg gtgtagcgtg ctgcttcgcg gataagtacc ggccaggcat ccgctcccgg
    13621 ggcaggtaag tgattatgtc tggcggtaaa tgtcacccag cgacaccact ggcttactga
    13681 ctccgcatcg acaatctgca gagtatcttc aaattcgcta taaatagcct gctctgaaag
    13741 ctctggctcc atctcctgga aatcagccaa tgattcgcgt tcgcctacca gaatgacttt
    13801 cagcttcaat ggcatcgaag gcacagagac ggggagaggg cgcgactcat caaacgcaac
    13861 ccagtcaaaa cgctcgcggt taacgatatt tttcagccgc atccacagca gaggttgcgc
    13921 cagcagtgta cgcaaagaga tgatgagaat accgccattt gcctgatgca ccagaccagg
    13981 ctgcagggta atgtcgccat taaactggcg caggcagcca aagagttgct ccgcttctac
    14041 ccagtcggca gcgacaactt gcgttaaagt cgcaaaatta tcatctgcac tcactgcgtg
    14101 acgtaagcgg atggagtggc cggaaacctc atagtgatcg cccaccagtt ggcctgcatc
    14161 gctttgtagc gtacgcgcgg catcggcaat aagattcaga tactcagact cttccggggc
    14221 cttagccagc ataaaagagg aggatgctcg cgtatgcagc aactgctcca gcgcaaattg
    14281 cagccgcggt tgagtatcac tgaataaagg atcgttttcg tcaatcaaat gtggctgagc
    14341 aaatatttcc tgatagctat cggtatcagg aaccaggtca cgccatgcaa gtttcgtaat
    14401 ggtcaaagtt gatgtttttt agtctgttgt caaagccgcg attataccgt aaccggcact
    14461 acagcacacg tagaaagcac cgacaatact cctggcatgg gcgttaaagc tcacaggatg
    14521 gagattcttt tcttcactgg cctaaaaagc tgatattctg taaagagtta cacggtaaca
    14581 ttgagatcgc tatgaaatat caacaacttg aaaatcttga aagcggttgg aaatggaagt
    14641 atctggtgaa gaagcatcgc gaaggggagt taattacccg ttacatagaa gccagtgccg
    14701 cccaggaagc cgtcgatgtg ttgctctcgc tggaaaatga acccgtgctg gtaaatggct
    14761 ggattgacaa gcatatgaat ccggaactgg tcaatcgcat gaagcaaacc attcgggcca
    14821 gacggaagcg ccattttaat gcggaacacc agcatacgcg caaaaagtcg atcgatctgg
    14881 aatttattgt ctggcaacgt ctggctggtc ttgcgcagcg tcgcggtaaa acgctttctg
    14941 aaacgattgt tcagctgatt gaagatgcgg aaaacaaaga gaaatacgcg aataaaatgt
    15001 cttctctgaa gctggatctg caggcattgc tgggtaagga ataactgacg aaagtcagtt
    15061 caatttacta aaggcaaaaa aaaccccgca gcagcggggt ttttctacca gacgataact
    15121 taagcctgcg gctgagttac aacgtctttg atacctttaa cttcgatctc tacgcgacga
    15181 tccggagcca ggcagtcgat cagtgcagca cgctgtttca cgttgtcaca ggtgttgcca
    15241 gtaaccgggt tggattcgcc cataccacgt gcggagatct tgtctgccgg gatacctttg
    15301 gagatcaggt aatcaacaac agactgagca cggcgctcgg acagaccctg gttgtaagcg
    15361 tcagaaccga tgcggtcggt gtaacccaga acaactacgg aaccgtcttt cggatccagg
    15421 ttgctcagct ggctgtacag ctgatccaga gcagcctgac cttccggttt cagggttgct
    15481 ttgttgaagt tgaacagaac gtcagacttc agagtgaagt gcttggtctg tacttccggt
    15541 gccggagctg gagccggagc aactactgga gctgcttcgc cctgaccgaa acggtaggaa
    15601 acacccaagc tcagcatgcc gttgtccgga cgagtgccga tggtgtgtgc gtcaccgatg
    15661 ttgttggtcc actggtattc cagacgggta gcgatttcag gagtgatcgc gtactcaaca
    15721 ccgccagcga agaccggaga aacgccggtg tcgtggtttt taccataaac gttggattta
    15781 gtgtctgcac gccataccat accacccaga cgagtgtaga tgtccaggtc gtcagtgatt
    15841 gggtaaccca gtttagcggt cagttgaacg ccctgagctt tgtatgcacc gttttcaacg
    15901 ctgcctttgt acggcatacg acctaaccag tcgtaaccca tttcaaagcc aacatacggg
    15961 ttaacctggt aaccaccaaa agcaccagcg cccagttggt tttcatgggt cgggccattg
    16021 ttgttgatga aaccagtgtc atggtactgg gaccagccca gtttagcacc agtgtaccag
    16081 gtgttatctt tcggagcggc ctgcgctacg gtagcgaaac cagccagtgc cactgcaatc
    16141 gcgatagctg tctttttcat tttttgcgcc tcgttatcat ccaaaatacg ccatgaatat
    16201 ctccaacgag ataacacggt taaatccttc accgggggat ctgctcaata ttaactctac
    16261 cgatatcttc ggcttatgcc gagcacccct ggcgatgtaa agtctacaac gtagttgaaa
    16321 acttacaagt gtgaactccg tcaggcatat gaaaaaaaag tcttgtataa ggtatgttta
    16381 atcttttttg tcagcgacaa tttacagaag aaaatcgcgg aaaccgcttc agacaagcct
    16441 ccgcaaggaa aattagtcac gactgaaagc attggctggg cgacaaaaaa agttccagga
    16501 ttaatcctaa atttacttaa tgatacaaat tagagtgaat ttttagcccg gaaagttgtc
    16561 tcgtggcgtg agaggatgcg cttaccggac gcataataaa ccccatagcg ttaccttcat
    16621 ttgccgcatc aacaagttca gcatgctctt cttcagtcaa atcatctgcc aaccaaccga
    16681 tcaccacact gtaattgccc gtgcgtaaag cgcgaaccat tgactccaca gtgtggcaag
    16741 gggagagctg gctaatctgc attactttcg ttaagggtag cccagatgcc tgaacccatt
    16801 cccgactcag tttttgttgc ggtgttaacc agagttgcca gcgcgattgc tgaccgagtt
    16861 gctgtaacaa tggcaacagt agaagttgcg tcatcatggg ctgatcttcg cgatagacaa
    16921 cttcactgat aagcccggct gtagtgtttt ccgtagagac acgcgcaatt ttacttgctg
    16981 cggatgagaa cgacgaagaa cgatgtgcat agcctgaagt gtacataatc aatccagccc
    17041 ctgtgagtta ctgtatgaat gtacagtaca tccagtgaca acaaagatca accctatttt
    17101 cggaaagagc ctcgcaaatt ttttcgttgg tgacgggaaa acataaatta atcttgcccc
    17161 ttaagaataa gttgcctatt ttcgtagtta acggatccgt taatgtgaat cattctttta
    17221 tgttatgatt ttaaaaggaa ttttatgaaa agcctctcct ataagcggat ctataaatca
    17281 caagaatacc tggcaatgtt gggcacaatt gaataccgat cattgtttgg cagttacagc
    17341 ctgaccgttg acgacacggt gtttgcgatg gtttctgatg gtgagttgta tcttcgggct
    17401 tgtgagcaaa gtgcacagta ctgtgtaaaa catccgcctg tctggctgac atataaaaag
    17461 tgtggccgat ccgttaccct taattactat cgggttgatg aaagtctatg gcgaaatcaa
    17521 ctgaagctgg tgcgtctgtc gaaatattct ctcgatgcag cgctgaaaga gaaaagcacg
    17581 cgcaataccc gggaaagact gaaagatttg cccaatatgt cttttcatct ggaagcgatt
    17641 ctcggggagg tggggattaa ggatgtacgg gcgttacgta tacttggggc aaaaatgtgt
    17701 tggttgcgac tgcggcagca aaacagtctg gtgacagaaa agattctgtt tatgcttgaa
    17761 ggtgccatta tcggcattca tgaagctgcg ctcccggtgg cacgccgcca ggagcttgca
    17821 gaatgggctg actcacttac gccgaaacag gagtttcctg cggaacttga gtaatctggc
    17881 gttgcagacg accaatctca ggcagtaatg caatcaataa tccaacttgt tgtacgacca
    17941 gaggttcttt gctgtctgcc cgtggttcaa gttgctgcat ccgctgtttc aggctagcta
    18001 atgcctcatt gacgcgttct tcatcagcag gttgatgatg taacgcgtca tcaacatagc
    18061 aaactgcgtc atcaagaaac gccagaattt caggattagt taactgctcc cggtgagcac
    18121 cgagggctga gatatagctg gtaaacgtat ggttaaggca cagcaaccga aacgcggctt
    18181 cgcgaatttg cggggtaacg ttcggctcgc tggacatatt tgataccacc gacgccagct
    18241 cagcatcacg gttgtgtgca tcgcggcggg caatacgata cgccagacgg ttatcacgcc
    18301 cctgatggta ttgctccagt atggcatcga gataccgaca gttggcctct gtggcgcgtt
    18361 cgagcatgcg cggcaaattg cgaaactgcc agtcaggcca gatgtagctc actgccgccc
    18421 acgcaatggc acaaccaatc agcgtatcga ttacgcgagg taacgctact tcaaaacctt
    18481 cacccagtaa gttaaaacac agtagcacca aaagtgtgat gaacatcgtt gcatgagcgt
    18541 attgcacgtt acggaaggca aaaaagagca cgccggtaat aaccagcagc accagctgcc
    18601 cttccagtga tggcacaaac cacagcacag gaatgccaat ggcgatacct accagcgtac
    18661 caataatcct taacttcagg cggtggcgcg tggcgttata gtttggctgg cagacaaaca
    18721 aacttgtcag caagatccaa aacccgtgat gcattccggt tatttgaatg atggcgtagc
    18781 cgaagcacaa caccagcgac attcttaccg catgacggaa gagggcggat tccggcgtga
    18841 agtgacggct aagacgcagc cagatatcac tcaacccgtg cgggctgtca tcagcgagct
    18901 cattttcgtc attattatgg ggtagtgcct gggcctgttc tgattcaatt gttgccagtt
    18961 gggcatcaat ggcgcgtaaa ttgttcagca aaaatcccag tgttttgagt aaatcggcgg
    19021 gtgcgccgtt atcgcgcatc cgctccagcg cagcatcaat atgcgtaaaa gcgcgctcaa
    19081 aatgcggatc atgttgataa ggctgacgca acaaaataca gcgtgacagt tgctggcacg
    19141 cctggccctg catcgacatc agccgctgaa aacggaacag cacgtcgctg tggcgaaaat
    19201 gttcacgcaa tgtttgatac tgaatatgag aagagctggc acgctcgtga atatcctgtg
    19261 cgacaaagta ataatgcagc gtgcgacgcg ttccccgttg accacgatcg ccacgtaagc
    19321 gggtcagcag cgagagtttc gtctgattca atgtcgccat cagcagaccg ttggcgagag
    19381 ccaaatcgta cagcggtgcc tggctttcat cttcaatatc aggatcaaac atgcgcgact
    19441 tgagctcaag ataacgcgcc agttgttcat agcaacgcgc caggttgtcc tgcagcgggc
    19501 ggaccgggaa cagcagatga ccaataagtg tcaggacgtt gtaccagacg gcaccggcca
    19561 gcagatacat cggctgctga taccagtgct catacagtga tgttcccaac atagtgtaaa
    19621 tggcgatcag caatgcaccg aaggcaattg ttgcatagcg ttgacccaga ccgccgagca
    19681 aaatgaagcc gctggtagag agcgttaagc caatcgcaaa tagccagggc cagggaaaca
    19741 gcaattctac tgaggccgag gcgataaaaa agcagaacag cgtaatgatg aggttacgca
    19801 aacgtcccgc cagtcggtca tcgagatcgg tcagcgccgc tgccaccatc cccagcgtta
    19861 gcggaatcgt cagttttaca tcacccagcc accacggaaa cgctgtggtt ccacaaagcg
    19921 caataaaaat acgcgcgtaa tacagccagg cgctgttcca ggtatagcgt ttgagcaaag
    19981 gacttagcat aaaggccata ttagtggatt attcaaaacg acgacgtgca ttggcttcac
    20041 gcgcagcttg cgctgtttct accgatacca cgcgacgacc aaccggccat agtgcaatag
    20101 cggcaatttt aaagttcgca atgccgacag gaatgccaat gattgaaata cattgtgcga
    20161 tgcccgttgc aatgtgcatc aggcataacc accagccaaa gaaaatcagc cagaaaatat
    20221 tcaataccgt accgccagta ttcagcagca catttttgcc agccgggttc agttcatcga
    20281 catgaatagc ttcattgcca taaggcacca gagacagttt agtgatctcc cagcaggatc
    20341 gtgtcagcgg taaggtaaaa atcagcacaa tactgaccag agtcgccaac agccagccca
    20401 gagtggtggc aaatccgcca agcacaaagt tcagaatgtt caaaacggta cgcataaaac
    20461 ctcgctttac tgtggttttc agtaatgggc ggcaattgta acgttttttt gggctggagc
    20521 acgttttctc tgacggttac actgataaga aataatttcg tgtggatcta cagagtcatg
    20581 gaactgaaag cgacaacgct tggaaaacgt ctggcacagc acccttacga tcgggcggtg
    20641 atcctcaatg ccgggattaa agtctccggc gatcgccacg aataccttat tcctttcaat
    20701 caattactgg cgattcactg taagcgtggt ctggtatggg gcgagctgga atttgtactg
    20761 ccggacgaaa aagtggtgcg tctgcacggc accgaatggg gcgagacgca gcgtttttac
    20821 catcatcttg atgctcactg gcggcggtgg agtggcgaga tgagcgaaat tgcgtctggt
    20881 gttttacgcc agcaactgga tttgattgcc acgcgcactg gagaaaataa atggctgacg
    20941 cgtgagcaaa cctctggcgt tcagcaacaa atccgccagg ctttgtcggc gttgccgttg
    21001 ccggttaacc gactggaaga attcgataac tgccgtgagg cgtggcgtaa atgtcaggcc
    21061 tggttgaaag atattgaaag cgctcggttg cagcataacc aggcgtatac cgaagccatg
    21121 cttaccgagt atgcggattt tttccgccag gtcgagtctt caccgctgaa tccggcgcag
    21181 gcccgggcag tcgttaatgg cgagcattct ctgttagtgc tggcaggtgc aggaagcgga
    21241 aaaacgtcgg tgctggtggc ccgtgcaggc tggttgctgg cacgtggtga agcgtcccct
    21301 gagcaaattt tattgctggc gtttggtcgc aaagccgctg aagagatgga cgagcggatt
    21361 cgcgaacggc tacataccga agacattacc gcacgcacgt ttcatgcgct ggcgctgcat
    21421 attattcagc agggcagcaa aaaagttccg atagtcagca aactggaaaa tgataccgct
    21481 gcccgtcatg aactctttat tgctgagtgg cgcaagcaat gcagcgaaaa gaaagcgcag
    21541 gcgaagggct ggcggcaatg gctgacggaa gaaatgcagt ggtcagtgcc agaaggtaac
    21601 ttctgggatg atgaaaaatt acagcgtcgc cttgcctctc gcctcgatcg ctgggtaagt
    21661 ctgatgcgga tgcacggtgg tgcacaggca gaaatgattg ccagtgcacc cgaagagatt
    21721 cgcgatctgt tcagtaaacg tatcaagttg atggccccgt tattaaaagc ctggaaaggt
    21781 gcgctgaagg cagaaaacgc tgtcgatttt tcgggcctta ttcatcaggc gattgtgatt
    21841 ctggagaaag gtcgctttat cagcccgtgg aagcatattc tggttgatga atttcaggat
    21901 atctcgccgc agcgggcagc gttgttagcg gcattacgca agcaaaacag tcagacgacg
    21961 ttgttcgctg ttggtgatga ctggcaggcg atttaccgat tcagcggtgc gcaaatgtcg
    22021 ctcaccaccg ctttccatga aaactttggt gaaggcgaac gttgtgattt agacacgact
    22081 taccgtttta acagtcgtat cggtaaggtg gcaaaccgtt ttattcagca gaacccaggc
    22141 cagctgaaaa agccgctaaa cagcttaacc aatggagaca aaaaagccgt cacgttattg
    22201 gatgagagtc aacttgacgc tttgctggat aagctctctg gttatgccaa accggaagag
    22261 cgcattctga tcctggcgcg ttaccatcac atgaggcctg ccagcctgga aaaagcggca
    22321 acacgctggc cgaagttgca aatcgacttt atgaccattc atgccagcaa agggcaacag
    22381 gcggattacg tcatcatcgt tggcttgcag gagggaagtg atggttttcc ggctgcggcg
    22441 cgggagtcga ttatggaaga ggcgctactg ccaccggttg aggatttccc ggacgctgaa
    22501 gaacggcggt taatgtacgt ggcgctgacc cgggcacgcc atcgggtatg ggcactgttt
    22561 aacaaagaga atccctctcc ctttgttgaa atactgaaaa atctggatgt gccggtggcg
    22621 agaaaaccgt aagaaacagg tggcgtttgc cacctgtgca atattacttc agacggtccg
    22681 cgagataacg ctgataatcg gggatcagaa tatcgaccgc gtcgttgaaa tgcggcgact
    22741 ggattatgaa gtctgccgtt gccacgttgg tggcgaccgg aatgttccat accgtcgcca
    22801 gacgcagcaa ggctttcacg tcaggatcgt gcggcacggc atttagtgga tcccagaaga
    22861 aaatcaatac atcaattttc ccttctgaga tcaatgcgcc aacctgctgg tcacccccca
    22921 ttgggccact caacatcgcg ttgacgttca tgccggtcgc gcgggaaatt aagttaccgg
    22981 tagtgcctgt tgcatacagt acgtgttgtt ccagtaacgg ttgatgccgt tccacccagc
    23041 tcatcagcat ttgtttgcag tgatcgtgtg ccaccagcgc aatatgtttc cgcgcaggta
    23101 aagtgcgagt cgtcagttcc ataatgtaca tccgtagtca actttcctac agattactgt
    23161 aagcacttat cgctgcaaga taaagaccga aaaagcctgc gcacaggcac aaaaatctca
    23221 ggaagatggt tgtttttccg cccactgcag gaaagtattt cgcgtttgtg ggtcagccag
    23281 tttaaaccaa tacttcagcc gttgttctgt gagcacctga gactgcggtg gaatagcatc
    23341 cagctcggaa acacccgaaa gcagcgtact gtcatctgcc atcatcgtgg caaattgcgg
    23401 tagtgaagcg cgtttcgcgg atttgttata gcgttcaacc tcgacctcat aatcaatcgt
    23461 ttttgccgtt gaggtaatgg cgagaatatc cagctttacc ggaatcggcg tcgcatcgcc
    23521 atccaacaat tcaaggcgcg gcgcggcatc aaaatggtta gcttcccgct cattctccag
    23581 gcgaggcagg cgaaaattga cctggttgat gagctgggta ttaaaactga ccactagcgg
    23641 tggggagata tacagccgtt cttcactatt ggaaagatga atcgtcttct caacgcgaaa
    23701 cactaactga tgcggtccat tatccagttc aatgctgtcc gcaccgcgca gcagagagct
    23761 ggaaaccttc ttgccgtcga gtaccagaag atcgacatcg gttgaaagcc gcagcgtggt
    23821 ggcaaaaacg gataccggca aacataatgc aatcaaggtg gtcacgatgc cggttttcat
    23881 aggtagctcc tgtcaaaaga ccgcccgaat aataatgtgt caaaattttt ctttaatcat
    23941 acttactaac atatagacat atttcccgct tttgctctca ttcattcgta ttagctgcat
    24001 ggttggcatg tcggctttgt cgtacacttt gttaaacagt ctggaggaaa taatgaaaga
    24061 aaccgatatt gcaggcattt taacgtccac tcacaccatt gcgctggtgg gggcaagcga
    24121 caaacccgat cgtcccagct atcgcgtgat gaaatatcta ctcgaccagg ggtatcatgt
    24181 cattccggtt tcgccaaaag ttgccggcaa aacgctgctg ggccagcagg ggtatggcac
    24241 gctggcagac gttccggaaa aggtcgatat ggtcgatgtt ttccgtaatt cagaagcggc
    24301 gtggggcgtg gcacaggaag ctattgccat tggcgcgaaa accctctgga tgcaactggg
    24361 ggtgattaat gagcaagcgg cagtactggc acgggatgcc gggttgaatg tggtgatgga
    24421 tcgctgcccg gctattgaga tccctcgcct gggcctggcc aaataaaaaa tccccggaag
    24481 gcaaaaacct tccggggatt cgttcaggga tcagttacgc agacgcgggg cctggagttg
    24541 tttgcggatg gtctgcgcca gctcatccat ggatggctgt tcaggatgtt catcctgcaa
    24601 ttcgctactt agctgggctt cagccaggta ggtatgaacc ggtaggccgt tatcgtcctc
    24661 catcactacg tgataccacg gagcggcgcg aagctcgtca tttaccgcca gctcatcagg
    24721 cgacggttca gagagcgaat aaaccgggtc gatatccacg accactccga gataacctaa
    24781 cagggaatgg cggacctgct ggccgatacc gaatttgctg gcaatcatag tcacctcccg
    24841 ggaaatcttt acctttgata taagggtaaa attccacatt tcaagttaca tgacgcgaca
    24901 ggcaaaccct ttcagatata gcccttccgg ataggtagcg atcaccggat gatcggctgc
    24961 ctgacggaac tgctctataa attgtacatc acggccggca tcaattgcgg catccgcgat
    25021 gattttctga aataaatcgc tggtcatcag accggaacag gagaaagtca ggagaatacc
    25081 gccttcattc agcaactgaa tcgccagcat gttgatatct ttatagccac gacacgcgcc
    25141 catcaactgg cttttattct caacaaactt cggcgggtcc atcacgataa cgtcaaattt
    25201 ttcaccgcga tcgcgataag tacgcagcaa tttaaagaca tcatcacgga caaactcagc
    25261 cttgctcaga tccagtttgt tcagctcaac gttctgccgt gcaatatcca gcgcttcctg
    25321 ggaggtatca acgctgacaa cctggctgca accgcccatc agtgccgata cggcgaaacc
    25381 accggtatag gagaaacagt tcagcacacg tttattttca acgtagcggc gggtagccag
    25441 gcggctgtct cgctggtcca ggtagtagcc cgttttgtgt ccgtgctgaa tatccaccag
    25501 cagcttcatg ccgtgttctt caatcggcag cagggcaggc ggcaactcgc cggtgacgag
    25561 gcccagggtc agctccatcc cttctttttt acgtaccgca acatcgctgc gatcgtaaat
    25621 cgcacattcc gggtacagcg tttgcagggc actaactaat gccgcgcgct gatattctgc
    25681 cccagcactc agcagttgca gcaccagaaa attaccgaaa cgatcgatag taatacccgg
    25741 caggccatca gattctccgg cgattaaacg atagctgtcg aggccatctt tttgcgccag
    25801 ccagtcacgc catttttgtg cttgttgcaa acggcgggaa aaaaaagcaa tgtcgataga
    25861 ctcagacggg tcaaacgtcc agacgcgcgc ccggatttgc gaagctggcg aataagcgcc
    25921 gcgtgctaac cattttccct gatgatcaac aatatcgatg gtttcaccga ggctggcttt
    25981 accttccatg cgggcaacgg ccccggaaaa gacccacgga tggcgacgaa gtaatgattt
    26041 ttcgcgccct ttggctaaca ctaaacgtac actcataatt tacttttctg tcgatgcaaa
    26101 gaaatgggcg tcattgtccg gagttttcca tggatttgca acgcgtccat taaggataag
    26161 gagagcagca atgtcgaaag tctgcataat tgcctgggtt tacgggcgag ttcagggcgt
    26221 aggatttcgc tacaccacac agtacgaagc gaaaagactg ggtttaaccg ggtacgccaa
    26281 aaatcttgac gatggcagcg tggaagtggt tgcctgcggt gaagaagggc aggtggaaaa
    26341 attaatgcag tggttaaaga gtggcggccc gcgttctgcg cgtgtagaac gggtgctcag
    26401 cgagccgcat catccctcgg gggaattaac cgattttcgt atccgttaaa tacattttac
    26461 cggttttggc aggccagcaa ttttggtggc ttgcttagcc ggacctttcg gaaacagtcg
    26521 gtataaatag cggctgttac ctttttcttc gccaaattta ttcgccatcg cttttaccag
    26581 catacgaatc gccggagaag tattgaattc cagatagaaa tcacgcacaa aacgcaccac
    26641 ttcccagtgt tccggtgaca gcgaaatccc ttcgttctct gcaatcacca ctgccagcgg
    26701 ctcactccac tggctgcttt ctttgagata gccttcggta tccgtttcta tctctttacc
    26761 ttcgaagatc agcataatta ttactacctt aatcagactg gcggcagtgt aacaaaaaac
    26821 aaagccccgc ataaagcgag gctatgaaag tgttagcggg tgagattaat cgcggctggc
    26881 gaagcccaga atgctcagca ggctgacgaa gatgttgtac agcgaaacat acaggctaac
    26941 cgtggcacga atatagttcg tttcaccgcc atgaacgatg ttgctggttt caaacaaaat
    27001 agcgccagag gagatcaaaa tgaagaccgc actgatcgcc agatgcagag caggcagctg
    27061 caggaagata ttagcaacca taccaatcag caccaccaca atacccgcca tcagcatacc
    27121 gccgaggaac gacatatctt tgcgggtggt cagcacatat gcagagcagc agaagaacac
    27181 taacgccgtt ccgcccagag ccatagcgat tacgtccccc attccggcag acagataggt
    27241 gttcagaata ggtccgagga tataacccag aaaaccggta aaggcgaatg cggagataat
    27301 cccggtcggc ttattcgccg ttttataggt caggaacatc aaaccataca tacccaccag
    27361 cgtcagaatc agacccggag atggcagcat cagcaccgta ctggcagttg cggtaatcgc
    27421 cgaaaaggcc agcgtcaggc tcagcagaaa ataggtatta cgcagcacct tatgggtgct
    27481 aagcagtgat gtacggtcat gtgaagaact aacaatacga tccattgagt cactctctat
    27541 gacagatgta attaattaag cagcataatg ataatgcgta agggcaccca gaagttttac
    27601 ccatctttac gcatttgatc tggaacaggt ttaacagcgg attatcaggt cattaagcaa
    27661 atataacgcc ctgagaattt cgacaggcaa aagaaaaagg ggttagcatt tagctaaccc
    27721 cttatcttat ttggcggaag cgcagagatt cgaactctgg aaccctttcg ggtcgccggt
    27781 tttcaagacc ggtgccttca accgctcggc cacacttccg gaatgacgcg cactataaac
    27841 atcccgatgc ggcgtgtaaa cccctaattt gtttgtttgc ctgaaaaaca gccaaaagtg
    27901 cattgatagc gtgaaataac agcagattga tcatttcatc accatgaatt ccttctcttt
    27961 tactcgttta gcaaccggct aaacatcccc accgcccggc aaaaagaaaa ataggtccat
    28021 ttttatcgct aaaagataaa tccacacagt ttgtattgtt ttgtgcaaaa gtttcactac
    28081 gctttattaa caatactttc tggcgacgtg cgccagtgca gaaggatgag ctttcgtttt
    28141 cagcatctca cgtgaagcga tggtttgcct tgctacaggg acgtcgcttg ccgaccataa
    28201 gcgcccggtg tcctgccggt gtcgcaagga gaagagacgt gcgatatgaa taacgaggaa
    28261 acattttacc aggccatgcg gcgtcagggc gttacccggc gcagctttct caaatattgt
    28321 agtctggctg ccacgtcgct gggattaggc gcgggaatgg caccaaagat tgcctgggcg
    28381 ctggagaaca aaccccgcat tccggtggta tggatccacg gtctggaatg cacctgctgt
    28441 accgaatctt ttatccgctc cgctcaccca ctggcgaagg acgtcatcct ttccctgatt
    28501 tccctcgatt atgacgatac tttgatggct gccgccggaa cccaggcgga agaagtcttc
    28561 gaagacatca tcacgcaata caatggcaaa tatatcctcg cagtagaagg taatccgccg
    28621 ctgggcgagc aggggatgtt ctgtatcagc agcggtcgac cgtttattga gaaactcaaa
    28681 cgtgccgctg ccggagccag cgcgattatc gcctggggaa cctgcgcgtc ctggggctgc
    28741 gtgcaggccg cgcggcccaa tccgacgcag gcaacgccta tcgacaaagt catcaccgac
    28801 aaacccatta tcaaagtacc tggctgcccg ccgatcccgg atgtgatgag cgccatcatt
    28861 acttacatgg tgacctttga tcgcttgcca gatgtcgaca gaatgggccg tccgctgatg
    28921 ttctatggtc agcgaatcca cgataaatgc tatcgccgcg cccacttcga cgccggagag
    28981 ttcgtccaga gttgggatga tgacgctgcc cgcaaaggtt actgcctgta caaaatgggc
    29041 tgcaaagggc ctaccaccta taacgcctgt tcctccacac gctggaatga tggcgtttct
    29101 ttcccaatcc agtctggtca cggctgcctg ggctgtgcgg aaaatggttt ctgggatcgc
    29161 ggttcgttct acagccgcgt ggtcgatatt ccgcaaatgg gtactcattc caccgccgat
    29221 accgtcggtt taaccgcgct tggcgtggtg gcagcggctg ttggtgtgca cgcagtcgcc
    29281 agcgccgttg accagcgcag acgtcataac cagcaaccta cagaaaccga acatcagcca
    29341 ggcaatgagg ataaacaggc atgagcactc agtacgaaac tcagggatac accatcaata
    29401 atgccggacg ccgcctggtg gtcgacccga ttacgcgcat cgaaggccac atgcgctgcg
    29461 aagtgaatat taacgatcag aatgtgatca ccaatgccgt ctcctgcggc accatgtttc
    29521 gcgggctgga gatcatccta caagggcgcg acccgcgcga tgcgtgggcg ttcgttgaac
    29581 gtatctgcgg cgtctgtact ggcgtacacg ccctggcttc ggtttacgcc atcgaagatg
    29641 ctatcggtat taaagtgccg gacaacgcca atatcatccg caacattatg ctggcaacgc
    29701 tctggtgcca cgatcatctg gtgcacttct atcagcttgc cgggatggac tggatcgatg
    29761 tgttagatgc gctgaaagcc gacccgcgga aaacctccga actggcgcaa agtctctcct
    29821 cttggccgaa atcatcccct ggctatttct tcgacgtaca aaaccgcctg aaaaaatttg
    29881 ttgaaggcgg gcagttgggg atcttccgca atggctactg ggggcacccg cagtacaaac
    29941 tgccgccaga agctaacctg atgggctttg cccactatct cgaagctctc gatttccagc
    30001 gtgaaattgt caaaatccac gcggtctttg gcggtaaaaa cccgcatcca aactggattg
    30061 tcggcgggat gccttgcgcc atcaacattg acgaaagcgg cgcggtcggg gcagtcaata
    30121 tggaacgcct gaacctggtg cagtcaatta tcacccgcac ggcggacttc attaacaacg
    30181 tgatgatccc cgacgcctta gccatcggtc agttcaacaa accgtggagc gaaatcggca
    30241 ctggtctttc tgataaatgc gttctcagct acggcgcatt cccggatatt gccaacgact
    30301 ttggcgagaa aagtctgctg atgcctggcg gcgcggtgat taacggcgac ttcaacaatg
    30361 tgctgccagt ggatttggtt gatccgcagc aggtgcagga gtttgtcgac cacgcctggt
    30421 atcgatatcc caacgatcag gtcgggcgtc atccgttcga tggcatcacc gacccgtggt
    30481 acaaccccgg cgatgtcaaa ggcagcgata ccaacattca gcagctgaat gaacaggaac
    30541 gctactcgtg gatcaaagcg ccacgctggc gcggtaacgc gatggaagtg gggccgctgg
    30601 cgcgcacgtt aatcgcttat cacaaaggcg atgctgcgac cgttgagtcg gtcgatcgca
    30661 tgatgtcggc gttgaacctg ccgctttccg gtatccagtc aacgttaggc cgcattttgt
    30721 gccgcgcgca cgaagcgcag tgggccgcag gtaagttgca gtatttcttc gacaagctga
    30781 tgaccaacct gaaaaacggc aatctcgcca ctgcttccac ggaaaaatgg gaacctgcaa
    30841 cctagccgac agagtgccgt ggtgtcggtt ttaccgaagc gccgcgcggg gcgttaggcc
    30901 actgggccgc cattcgcgat ggcaagattg atctctacca gtgcgtggtg ccgaccacct
    30961 ggaacgccag cccgcgcgat cccaaagggc agattggcgc ttatgaagcg gcgctgatga
    31021 acaccaaaat ggcgatcccc gagcaaccgc tggagatcct gcgtactctg cacagctttg
    31081 acccgtgcct cgcctgttca acacacgtgc tgggcgacga cggtagcgag ctgatctccg
    31141 tgcaggtgcg ttaacagcga aggagaatca tcatgcaaca gaaaagcgac aacgttgtca
    31201 gccactatgt ctttgaagcg ccagtccgca tctggcactg gttgacggtg ttatgcatgg
    31261 cggtgttgat ggtcaccgga tactttatcg gcaagccgct accttccgtc agcggcgagg
    31321 cgacgtatct gttctatatg ggctacatca ggttaattca cttcagcgcc gggatggttt
    31381 ttaccgtggt tttgctgatg cggatctact gggcttttgt tggcaatcga tactcccgcg
    31441 agctgtttat cgtgccggta tggcgtaaaa gctggtggca gggcgtgtgg tatgaaatcc
    31501 gctggtatct gtttctggca aaacgtccga gtgccgatat aggccataat cccatcgccc
    31561 aggcggcgat gttcggctat ttcctgatgt cggtctttat gatcatcact ggttttgcgc
    31621 tgtacagcga acacagccag tacgctattt ttgcgccgtt ccgttatgtg gtggaatttt
    31681 tctactggac gggtggcaac tcaatggaca ttcacagctg gcatcggctg gggatgtggc
    31741 tgattggcgc gtttgtgatc ggtcatgtct acatggcgct gcgtgaagac atcatgtccg
    31801 acggcacggt gatctccacc atggtcaacg gctaccgtag ccacaaattt ggcaaaataa
    31861 gtaacaagga gtgttcatga gcgagcaacg cgtggtggtc atggggctgg gcaacctgct
    31921 gtgggccgat gaaggcttcg gcgtgcgggt ggcggaacgg ctgtatgccc attaccactg
    31981 gcccgagtat gtggagattg tcgatggcgg tactcaggga ctgaacttgc tggggtatgt
    32041 cgaaagcgcc agccatctgt tgattctcga tgccattgac tacgggctgg aacctggaac
    32101 gctgcgaacc tatgccggag aacgcattcc ggcttatctc agcgcgaaga aaatgagcct
    32161 gcatcagaac agtttctccg aagtgctggc gctggcagat atccgcggac atctgccagc
    32221 acatattgcc ctcgtcgggc tgcaacccgc gatgctcgac gactacggcg gcagcctgag
    32281 cgaactggca cgggagcaac tgctcgctgc ggaacaatcg gcgctggcgc agttggctgc
    32341 gtggggaagt gtgccgcaac tggctaatga atcgcgttgt ctcaattatg actgtctgtc
    32401 gatggaaaat tacgaaggcg ttcgcttgcg ccagtaccgg atgacacagg aggagcaggg
    32461 atgagcaacg acacgccatt tgatgcgttg tggcaacgaa tgctggcgcg cggctggacg
    32521 ccggtcagtg aatcccgtct tgacgactgg cttacgcaag cgccagacgg cgtggtgtta
    32581 ttaagcagtg acccgaaacg cacgccagag gtcagcgata atccggtaat gattggcgaa
    32641 ttactgcacg agtttcccga ctatacatgg caggtggcga ttgctgacct tgagcagagc
    32701 gaagccatcg gcgatcgctt tggcgtcttt cgctttccta ccactttagt gtttaccggc
    32761 ggaaactatc gcggcgtgct gaatggtatt cacccgtggg cggaactgat aaacctgatg
    32821 cgcgggcttg tcgaaccgca gcaggagcgt gcctcatgag cgaaactttt ttccatctgc
    32881 tggggccagg aacgcaaccg aacgatgaca gtttcagcat gaatccactg ccgatcacct
    32941 gtcaggtgaa tgatgaaccg agtatggcgg ccctggagca atgtgctcac agcccgcagg
    33001 tgattgcgct gttaaacgag ttacaacatc aactaagcga acgccagccg ccgttgggcg
    33061 aggtgctggc agtcgatctg ttaaatctca acgccgacga tcgtcacttt atcaatacgc
    33121 ttctcgggga aggggaagtg tcagtgcgca ttcagcaggc tgacgacagt aaaagtgaaa
    33181 tacaggaggc gatcttctgc ggattatggc gggtgcgcag acgtcgcggc gaaaagttgc
    33241 tggaggacaa actggaggct ggctgcgcgc cgctggcgtt gtggcaggcg gcaacgcaaa
    33301 atctcttgcc gacagattcg ctgttaccgc cgcccattga tggcctgatg aatggcctac
    33361 cgttggcgca tgagttactg gcacatgtac gtaaccccga cgcgcagccg cacagcatta
    33421 atctgacgca attacccatc agcgaggctg atcggctttt tctctcacgt ctctgtgggc
    33481 cgggaaatat tcagattcgt accattggct atggcgagag ctatatcaac gccacggggt
    33541 tacgccatgt ctggcattta cgctgtacgg acaccttaaa aggcccgtta ctggaaagtt
    33601 atgaaatctg cccaataccg gaagtggtgc tggcagcgcc agaagatttg gtcgactctg
    33661 cgcagcggct tagcgaggta tgtcagtggc tggcggaagc tgcaccgacg taaaaagacg
    33721 gtaagtatcg ctttcagtct tatgaatatc gcaatcggcg aatacctctg gtcgtagagt
    33781 ttcaggataa agagggagat ctaacattat cgggttattt ttctctcttc gcctacagga
    33841 gtgcgcatgt gggatgtcat tgatttatcg cgctggcagt ttgctctgac cgcgctgtat
    33901 cactttttat ttgtacccct taccctgggg ctgatttttt tgctggctat catggaaacc
    33961 atttacgtgg tcaccggcaa aacaatctac cgcgatatga cgcgcttctg gggtaagctc
    34021 ttcggtatca attttgctct tggcgtggct accggcctga ccatggagtt tcagtttggt
    34081 actaactggg cattctattc caactatgtg ggcgatattt ttggcgcacc gctggcgatg
    34141 gaagcattaa tggccttctt cctcgaatcc acctttgtcg ggcttttctt cttcggctgg
    34201 cagcggctga ataaatacca gcacctgctg gtgacgtggc tggtggcgtt cggttcaaat
    34261 ctctctgcat tgtggatatt gaatgccaac ggttggatgc aatacccgac cggtgcgcat
    34321 tttgatatcg acaccctacg tatggagatg accagcttca gcgagctggt ctttaacccg
    34381 gtcagccagg tgaaatttgt gcacaccgta atggcgggct acgtgaccgg ggccatgttt
    34441 attatggcga tcagcgcctg gtatttactg cgcggacggg agcgcgatgt tgcattacgc
    34501 tcgtttgcca tcggttccgt cttcggtact ctggcgatta tcggcacgct acaactcggg
    34561 gacagttctg cgtatgaagt cgcgcaagta caaccggtaa aactggcggc gatggaaggg
    34621 gagtggcaaa cggaacctgc tcctgcaccg ttccatgtgg ttgcctggcc ggaacaggat
    34681 caagagcgta acgcctttgc catcaaaatt cccgcgctgt tagggatcct cgccactcac
    34741 tcattagata aacccgtgcc gggtctgaag aatttgatgg ctgaaaccta cccacgcttg
    34801 caacgcggac gtatggcctg gctgttaatg caggaaatat cgcaaggcaa tcgtgagccg
    34861 catgtgttgc aggcattccg ggaactggaa ggtgacctgg gctacggcat gttgctctcc
    34921 cgctatgcgc cggatatgaa tcatgtcaca gccgcacagt accaggcggc gatgcgtggc
    34981 gcgatacctc aggttgcgcc ggtattctgg agtttccgca tcatggtggg ctgtggttcc
    35041 ctgctgctac tggtgatgct gattgcgctt gtccagacgc tgcgtggcaa aatcgaccag
    35101 catcgctggg tgctgaaaat ggcgctctgg agtttgccgt tgccgtggat tgcgattgaa
    35161 gccgggtggt ttatgaccga gtttggtcgt cagccgtggg cgatacagga catcttaccg
    35221 acatactccg cgcactccgc tttaaccaca ggacaactgg ctttctcact gatcatgatc
    35281 gtagggcttt acaccctgtt cttaatcgcc gaagtctacc tgatgcagaa atatgcccgt
    35341 ctggggccga gcgcgatgca gagtgaacaa ccgacgcagc aacaggggta aagaagaaaa
    35401 tcatgtttga ttatgaaaca ttgcgcttca tctggtggct gctgattggc gtgatcctgg
    35461 tggtctttat gatctccgac ggatttgaca tggggatcgg ctgtctgctg ccgctggtgg
    35521 cgcgtaatga tgatgaacgc cggatagtga taaacagcgt tggtgcacac tgggaaggca
    35581 accaggtctg gttgatcctc gctggtgggg cattatttgc cgcctggccc agagtgtatg
    35641 cagcggcgtt ttccggcttt tatgtggcga tgatcctggt gctgtgctca ctgttcttcc
    35701 gcccgctggc ctttgattat cgcggaaaaa tcgccgatgc acgctggcgt aaaatgtggg
    35761 acgccggtct ggtcatcggc agtctggtgc cgccggtagt cttcggtatc gccttcggca
    35821 acttgttgct cggcgtgccg tttgccttca caccgcaatt acgcgtggag tatctcggca
    35881 gcttctggca actgctgacg ccattccctt tattgtgcgg attgctcagc cttgggatgg
    35941 taattttgca aggtggcgtc tggttacaac tgaaaactgt tggtgtgatt catctgagtt
    36001 cacagctggc caccaaacgc gctgcactgt tggtgatgct gtgctttttg ctggcgggtt
    36061 actggctgtg ggtcggtatt gatggctttg tactgctcgc ccaggatgct aacggtcctt
    36121 ccaatccgtt aatgaaactg gtggcagtgc tacctggtgc ctggatgaat aatttcgtcg
    36181 aatcgcccgt tttgtggatc ttcccgctgc tggggttctt ctgcccattg ctgacggtga
    36241 tggcgattta tcgtggtcgc ccaggttggg gatttttaat ggcgtcattg atgcaatttg
    36301 gcgtgatttt cacggcaggc atcacgctgt tccccttcgt catgccgtca agcgtgagtc
    36361 cgatctccag cctgacgttg tgggacagca cttccagcca gctgacgctg agcattatgt
    36421 tggtaatcgt gctgatattt ttgcccattg tgttgctcta cactctctgg agctactaca
    36481 aaatgtgggg gcgcatgaca acagaaactc tccgccgtaa cgaaaacgag ttgtactaag
    36541 gagcaggaac aatgtggtat ttactttggt tcgtcggcat tttgttgatg tgttcgctct
    36601 ccacccttgt gttggtatgg ctggacccgc gtctgaaaag ttaacgaacg taggcctgat
    36661 gcggcgcatt agcatcgcat caggcaatca ataatgtcag atatgaaaag cggaaacata
    36721 tcgatgaaag cgatcttaat cccattttta tctcttctga ttccgttaac ctcgcaatct
    36781 gcattcgctc agagtgagcc ggagctgaag ctggaaagtg tggtgattgt cagtcgtcat
    36841 ggtgtgcgtg ctccaaccaa ggccacgcaa ctgatgcagg atgtcacccc agacgcatgg
    36901 ccaacctggc cggtaaaact gggttggctg acaccgcgcg gtggtgagct aatcgcctat
    36961 ttcggacatt accaacgcca gcgtctggtg gccgacggat tgctggcaaa aaagggctgt
    37021 ccgcagcctg gtcaggtcgc gattattgct gatgtcgacg agcgtacccg taaaacaggc
    37081 gaagccttcg ccgccgggct ggcacctgac tgtgcaataa ccgtacatac ccaggcagat
    37141 acgtccagtc ccgatccgtt atttaatcct ctaaaaactg gcgtttgcca actggataat
    37201 gcgaacgtga ctgacgcgat cctcagcagg gcaggagggt caattgctga ctttaccggg
    37261 catcggcaaa cggcgtttcg cgaactggaa cgggtgctta attttccgca atcaaacttg
    37321 tgccttaaac gtgagaaaca ggacgaaagc tgttcattaa cgcaggcatt accatcggaa
    37381 ctcaaggtga gcgccgacaa tgtctcatta accggtgcgg taagcctcgc atcaatgctg
    37441 acggagatat ttctcctgca acaagcacag ggaatgccag agccggggtg gggaaggatc
    37501 accgattcac accagtggaa caccttgcta agtttgcata acgcgcaatt ttatttgcta
    37561 caacgcacgc cagaggttgc ccgcagccgc gccaccccgt tattggattt gatcatggca
    37621 gcgttgacgc cccatccacc gcaaaaacag gcgtatggtg tgacattacc cacttcagta
    37681 ctgtttattg ccggacacga tactaatctg gcaaatctcg gcggcgcact ggagctcaac
    37741 tggacgcttc ccggtcagcc ggataacacg ccgccaggtg gtgaactggt gtttgaacgc
    37801 tggcgtcggc taagcgataa cagccagtgg attcaggttt cgctggtctt ccagacttta
    37861 cagcagatgc gtgataaaac gccgctgtca ttaaatacgc cgcccggaga ggtgaaactg
    37921 accctggcag gatgtgaaga gcgaaatgcg cagggcatgt gttcgttggc aggttttacg
    37981 caaatcgtga atgaagcacg cataccggcg tgcagtttgt aatgcataaa aaagagcatt
    38041 cagttacctg aatgctctga ggctgatgac aaacgaagaa ctgtctaatg cgtagaccgg
    38101 aaaaggcgtt cacgccgcat ccggccactt tcagttttac tctttctcgg agtaactata
    38161 accgtaatag ttatagccgt aactgtaagc ggtgctggcg cgtttaatca caccattgag
    38221 gatagcgcct ttaatattga cgcctgcctg ttccagacgc tgcattgaca aactcacctc
    38281 tttggcggtg ttcaagccaa aacgcgcaac cagcaggctg gtgccaacag aacgccccac
    38341 gaccgcggca tcactcaccg ccagcatcgg cggcgtatcg acaatcacca gatcgtaatg
    38401 gtcgttcgcc cattccagta attgacgcat ccgatcgcgc atcagcagtt cagacgggtt
    38461 aggtggcacc tgaccgcgag taatcacatc aaagcctcct ttgccaaaat gctggatcac
    38521 tttgttgagc tcatctttac ctgccagata ttccgacaag ccatgttcat tactcacggt
    38581 aaacaggtta tgcgaataac cacggcgtaa gtcggcatca ataaataaca ctttttgatc
    38641 ggactgggcg atcaccgctg ccagagttga actgacaaac gttttaccac tgtctggcgt
    38701 cgcaccggtg atcatcagaa tgttattctc cgtctccatc atagcgaagt gcagactggt
    38761 tcgtagcgca cgtacggctt ccacagcaga atccgccggg ttatccaccg ccaggaaggg
    38821 gatattttta gtacgatggc gctgctgatt agaaaataaa tttttcttac gcagacgggt
    38881 acgtttatcc agccactcgg acattgggat agtggcataa acgctgatgc cgtgctcttc
    38941 cagttgttcc ggggcttcta caccacgacg caacatcgca cgcgccagca cggcacccac
    39001 cgaaataaac aggccaagaa taaaaccaag caccacgttc aacgcttttt tcggtttcac
    39061 tggctgcggc tgagtgactg ctgggtcgat aatccgcacg ttaccaatgg cactggattt
    39121 cgaaatactc aactcctgct ggcggttaag taattgcaga tataccgcac ggcccgcttc
    39181 tacgtcacgg cttaaacgta acacttcctg ttgagtggaa ggcattgccg atacccgctt
    39241 attcaggcgt ttgcgttctt gctccagcgt ctggcgtttt tccagcagcg cacgataagt
    39301 tgggtgatct ttcttataca gctgggagat ctctgcctcg cggaaagtca gctcattgag
    39361 ttgattatca acgttcacaa tctgctcaag aacggctttg gcttctaggt taaggtcaac
    39421 cgaatcgcgc tgctggcgat aaacgttgag tttttcttcc gcctggtcca gctcgctgcg
    39481 cacttcaggc aactggcgct gtaagaattc aaggctttgt gaatcctgcg ccgcctggcg
    39541 agcgatattc tgttgcaaat agttgttagc gatgctgttc agaatacgag taatcaactg
    39601 gggatcatca ccagtcatgg taagttccag catcccgctt tctttactgc gttcgctaac
    39661 ggtaaaggtt tcctgcaatg cgttaatcgc ttccagttcg gtacgctggc tcaggacaaa
    39721 ctgtgttcct ggtttggcct taatgtccgc gatagtcagc gcaacgccat ctttttccag
    39781 acgctggccg accataccat tgacggtgaa ctcttcacct tccagtgtat agtggccgtt
    39841 ttccccaacc gtgagtgtca gttgctgatc ctgaccattc agttgtggaa tatgcatcca
    39901 gctgatcgcc agctcacctg gtttttcttt ggttaatctc gcccagccgc gacccacaat
    39961 cggaaaatac ttctgctcaa ctatgtcgcg cagattcagt tcagcaatgg ttttaccgag
    40021 aatcatgcgc gattgcagca gttggatctc cggtgcagac tcgggcgatg agttagggat
    40081 catatcgctc aggccgctga gaatggcgtt gccctgtttt tgctcaacct ggaccagagt
    40141 atctgcctga taaattggtg tgcttaacag cgagtaagcg acagcgatca gcgtgaataa
    40201 cgcggttacg ctgataataa acttacggtg atcccataac tcgccgacca gacgaagcag
    40261 atcgatctca ttttcctgag tgctgcctgg tggcgtattc atatttttag ttgtcatcgt
    40321 attttataaa ctcaaattac cggctgaggc gcttcgccca ttcctgactg gcgcgctcca
    40381 acataccgta gacatgttca aatgcgtcct gacttttacg atagggatcc gggatctctt
    40441 tctgttccag ccattgccca aacagcattg tcttcccgcg gacctcggga gcgattgcgg
    40501 taacctgagc aatatgctct gactccattg ccagaatcag atcgtaattt cgtgccatct
    40561 cagcagtgag cttacgtccg gcatgtcctt caagagatac gccatgatta gcggcaacat
    40621 ctgctgctgt cgcatctgca gggtgtttta ccagaccatg aacacctgcc gatttgactt
    40681 ttacgcctgg cagacgttta cgcagcaagc gctcgccaat gggcgaacgg caaatgttgc
    40741 cggtacaaac caccaggatg gagttaaatt ttagttgggc catgtttgaa tccaccgtga
    40801 agtctctgtc aggtcatgca ccccggaaat cgtcggtacc agcagagaaa tcacacggtt
    40861 ccaacgagcc agcggcgcgg tagtgacata aacaatgtcg taaggttcaa gctggaattc
    40921 cgttccgagt atcattgccg atgcgtcctt cgcattcagc tgataaatat tggcgatttt
    40981 gccattctgc ttgttttgcg ttgcacgaat aacaaaaatc cccgtcgcat cagcgacatc
    41041 ctgattcata ccctcagcgt tacccagcgc ttccgccagg gtcataccgc tgcggtccat
    41101 tttcagcgtg ctctgtttac ccacttcacc catcacgaag actttcagat catcgttgcg
    41161 cggaataaat aaaatatcgc ccgggtgcag cagtttgttc tggcgcaagt cgccacgctg
    41221 catcagcgca tagaggttca ctttggtctt tacgccattc tgggtgagca ccacgttgcg
    41281 ccagtctgca tctgcggtca gaccgcccgc ggcgttaatc gcatccatga tggtcagagg
    41341 aatattggta atcggctgct gacccgattt gctgacttcg ccggtgacgt acgctttttg
    41401 cgatcggaac gccgcgacgc tgacatcgac ttgcgggctt tcaatgactg aatcgagacg
    41461 cgctgtaatc tcgttgcgta cttgggtaag tgttttcccg gccactttca ggcgaccaat
    41521 ataggggtag aaaatcgcac catcggcgtt aacccagttg ccggtatcac tggcgctacg
    41581 gtattgccct gcgggggtgg ttagttccgg gtgatcccag accgtaacca tcaacacatc
    41641 accaatcccg atacgatatt catagtttgc gatttgctgc tccagctccg ggttagcctg
    41701 cgacataatc ggtttggcgc gcaactgatc aatcaatcct ggcgtgacgg gatagatatt
    41761 gaccattttg tccaggtcat actgattgtc aggtagttca atgacatcct tgttcctggt
    41821 cgataaattc tgaccaggaa caagggtaca tgctgtcaaa gacagaacag ccaatgtcag
    41881 taccgaaaac ttaaaaatgt tctttttcat tggtttatat ttatcagtca atgtaatgtt
    41941 atgaattacg tcaggttatt gtccaaccgg tacttctcgc tctgccgtca ttggatagag
    42001 ctggtatttg cgtgacagca tttgtccacc atcacgcgtc aatggtgtcc acgaaaccac
    42061 cgcgcggttg cggttaggtc caatggtcat caagtcgaat ggaatcgaga tataaaaacc
    42121 tttactaaag ccgccttcgc cgtagtcatc tttagatacg ttactgattg ccgcccatac
    42181 ccctaccgcc acgccgctgt caaagcgttt ggcgacgtcg atcgttgctc ctttatcttt
    42241 tgccagatat tgcccaacgc taagtttcat cagtacgcca ttgagcgtcg gcgggttcca
    42301 gtaagccgtc acgaaaccag ttggcgtgga ataatcggtg aagcgcatca tgttgtccca
    42361 gtcacgttgc ttcacgtagt taacgtccac acccagcgcc cagctggcat ctagcgggcg
    42421 ataaagcagc tcggaaccga caccggcgta catcgtttcc agataaccgc catacacctg
    42481 gccatagaaa ccattgccta agtcggcaaa gtagttcgcc tgcaagttgt tgagataaac
    42541 gtcattgcga acgtaatcac ggatatgcgt gcgcacgcgg ggcagggtag agtccgcggg
    42601 caacagcgaa gacttaaact tgtcgtagtt gttgtaaata ttggtgaaaa taccgccatc
    42661 aagcagcagg tggtcggtaa accagtagcg ggcactggac atcagcccca gctggaacat
    42721 atagaaatct tccgggccgc ccagcgactg tgaaagtgtt gggttgaaag agtagctaaa
    42781 gcgatcttca cgaatacggt agccccgacc aaaggcagaa agatcttctg cttcaacacg
    42841 ttgttgttga agttgctctg attgaccagg cgctgtacca gccagctgtt tgcgcaggct
    42901 ggctacgtcg gtttcggtag tcaccatcgc catatgctcg cgcttttgcg tcacgctaat
    42961 cttctcaacg ccttgcggca ggttattcac cagaatccgg ttggcacgat cgaccgcttc
    43021 gcgagaatca cggtatttgt attgttgacc agacatatac agcgtcttat cgcgcagctg
    43081 aatttccggt gcttcaaaac ctgcgttgta cttcagcgcg gtaagttggt tcgctactgt
    43141 ggtgtactgc aatccttcag attcaggcgc aggttgatat gccggttttg gcgtatcgcg
    43201 cagggcaggg cgcagatcgt tgaaattggt ccgtaacgtg aagccaaaca tcaacgtgtt
    43261 accgcgttca taactcaggt tgagatctgc ccagctggca gcgcgataaa ctgcgccgac
    43321 gttgaaatgg cttgcctgag gcagtttgcc agcgaaatca ttctggtaat tgttgccatc
    43381 gtattcgagt ttcagacgca ggggattcca cggcgtttga tactcaatgc cgccaaagat
    43441 ggaagccggg ccacgaaaga tatcgctaaa gctgatatcg cccgcatcgt gagactctgc
    43501 gcgatgacaa tatttatcgt tcacccggca aaacgggttg gtaatattgc ccgcattacc
    43561 ggcgtagccc catgccatcc cgagggtgaa atcaaatggc cccgcttgct tgctggccac
    43621 cagatactca ccgtcaaaca gacccgtacc agcaatatca cgtttaccaa acgccacttg
    43681 cggtagccag taaccttctt cccacaggcg aagtttaaaa tcgaatgatt tgtctttgta
    43741 tgactgatcg ccgctgaaat cttcccactg gctatatttg cgtgtgcgca catccgtata
    43801 acgaatggtg ccttccagcc atgggaacag cgccacggag gtggagtaga accggtattg
    43861 atcgttatcc cggtagttga cgctgaattc accttccggt gcgatgcgcg catttggcat
    43921 ctgcaacaat cctgtgccgc caaagtctga ttgcgacgaa cccagcggat ccgggtaggt
    43981 taatacttca gcatgacagg cactggagac ggcaatggcc aggcagctta aaagataaga
    44041 attcttcttc atcagtcagg aacacgttgc gttaaaacag acacaatctg gtcatttaaa
    44101 tcagcatatt tttcgggcag tacatgcgca gaaaagccca accaaagctg gctgccaggc
    44161 ggtgggtcca catgtctttt attccacagg gcaacagggg cgacgacagt ctcaccctca
    44221 ggcgtaatca ccataacgtt attcttgtcc gcgcctgcaa ggcgggggtg atcttgcaga
    44281 taatcggtaa cgctacggcc tgcctgccag ggcaattgcc cggccccaga aaccgcaccc
    44341 agcagagtaa tagtcaccgg acgctgtacg gtatagagcg tatagtcccc gaccaacggg
    44401 ggattgctgt tctcatccac tcgaacaaaa tcagggtcca gtttgaccgg taagcgacca
    44461 gtgatattga gattgagtaa ctgctggcgc acagatttaa tcgttgccgc cacatcgtcg
    44521 tcagcttctg cttcccagga agcaagctgt gccatgacat gttggtagtc tttaagcgct
    44581 ttagctttcg ccgcagagtc ggtcagcaag gcaccaggcc accagaggcg atcgcgcagt
    44641 tgcggttgtg tcaccaactg gacaacattt tccatggggc caacggaaag tgtctgttgt
    44701 tcgccaggca gataaatagt caccgttcct tgcgcaaagg catggggtgt cattacgtaa
    44761 agtacgctgg caatgaaata cgactgtaat ttattcatgg tgcgggttta agaaacgtca
    44821 tttctacggg aataacccct gcgcctaaca tttgccgact ttgacgaacc tggccagtag
    44881 ccgaatcgac ccagaatgtg ttttgccact gtttttctgg ccgcgtggaa gtcacctctt
    44941 cctgccagac attacacagc acattgcgac ccgcaatatt cagcgtctct aatccagcaa
    45001 aggaaaaagt agaactcagg gtcgcagagc gaaaatggtt gtcttcactc cagagaatat
    45061 cgcgcgtcca gcggctgcca tcttttattg ccagcgcgtt acgcagaggg tcctgcccgg
    45121 aatttgtcac ttccagcaga ttattattaa gtttgacggt ttttaaaaga cgtccattgt
    45181 gggtaaccag catggcgtta tcctgggata accatttgct ttgttcttgt tctatatatc
    45241 ccagtaccac aaagattcgt tgcccttcat taaggcgtaa atacatcgtg gaataaggca
    45301 acgcctggat ctgctgatcc gctacggtga tatcctgatt atcgaaaagg ctggcgcgaa
    45361 atgtatcgac catactttgc tggctgtgcg tacatcccgc aagaaatagt gcgaaaatcg
    45421 ataaaataag agggcgcacc tttaatcctt gaaaggttaa ttaaaaaaat gcaaatcttt
    45481 aaagcccggt acgaatatcg caaccgggta tcatttaact ttaatttcga cgcgttaaag
    45541 cagtattagc gtgtagtgga cgtggtggtt gaggtgttat gagaaccgcc atcgccactg
    45601 tcatttgctg caacaactgc caacgtcgcc acaccaacag ccgttgccac accgacaact
    45661 gtcgccgtgc cgacagcgcc agcagccacg ccaccagtgg tagtagcagt cgtggttgcg
    45721 ccggtagtgg tcgttgtggt gccagtagta cccgtcgttg cctcggtccc gtttgttgct
    45781 tcaggggcag caaacgcagc tggcgtcgtc aacatgaagg ccataaggat tgcagaaagc
    45841 ttgtgtttca taacttttcc tttattcatc gcatggacaa tacgtacgct tgagatcagg
    45901 attgtctact ttgagtataa catccttgtg aaatctccct ttcctcatac cgcttgcact
    45961 atatactgcg ggtaggaaag gcgcgcagag ggaaatataa gattgttaac tatccccctc
    46021 tggaaatacg acttgtgagc ataagataaa tcttagcaaa atacaaatta aagataagga
    46081 aattgttacg aaagctatta attattgctg gtaatatagt ttcaagtggt actataactg
    46141 gctgttaaat ggcatttata actattaggt gcagagatat tcgcttaaat ggattagttt
    46201 ctttgtggaa aagtaactga tgttataata tatgatgttg actattgcac tattccaata
    46261 aaaccagtca gctttaaaca agcagcgtca tattaagaga gataaacatt tgccgctgtt
    46321 ggtcctcgca ggccatttac gcggcaaaat tccacacgta atcctggtat aagcacttct
    46381 gcgtcgcggg gagtgaatgc ggaaatatgg acctgaactt ctttacgacc gtcggagggg
    46441 ataatgaatc ctttgccgct tttgcgatca aaggttttga caattcctgt cattttacgg
    46501 gacaaacaaa ttccttactg aaaatactgc gctgcactat acggggttaa taaaataaag
    46561 ccagcgatat ttaagaccgc cggacggcta aaataaaatt tgcttaatct caattatcat
    46621 gcgttaatag ctgcgtcggt ttgaaagaca gacagcatac aaagtagttt actaaagcag
    46681 ttctcattat caggcattat ccccttcttt tgagtctctc tcctgaacac taagtagttt
    46741 ctgtattaaa gccctgtttg ccgaaaggcc caaaatgaag gaagtaaaat atgtctaata
    46801 aaatgactgg tttagtaaaa tggtttaacg cagataaagg ttttggcttt atcactcctg
    46861 atgatggcag caaagacgtt ttcgtccatt tcactgccat ccagagcaat gaattccgca
    46921 cgctgaacga aaatcagaaa gttgaatttt ctattgagca ggggcaacgt ggccccgcgg
    46981 cagcgaacgt tgttacgctc taaggttgcc gttattactc aacatctcca tttccgctgt
    47041 ccatgttgtc atggttcaca gtaccgcaca tcggcattcg atgtgacgga gcgaaatcct
    47101 ttgggcgcta agtgtatttt ttgtaaatcg acgatgatca cctttgataa cgtcacgctg
    47161 caaatacgca ctgaccatgc gccgctggat ttcacaaaat aatatcaggc tccctcg
//
LOCUS       DADMJE010000008        43879 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.008, whole genome shotgun sequence.
ACCESSION   DADMJE010000008 DADMJE010000000
VERSION     DADMJE010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43879)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43879)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43879
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.008"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            83..625
                     /gene="lpfE"
                     /locus_tag="JN001_000466"
     CDS             83..625
                     /gene="lpfE"
                     /locus_tag="JN001_000466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000831423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long polar fimbrial protein LpfE"
                     /protein_id="HAY9051803.1"
                     /translation="MKRTILALCLLPLSFSSFAATTDLGPKGTLKFTLKISQGACELV
                     KDSVEVDMGTAVLKKPVRIGTEINPTPFSIGLKNCSEVVRAYVTMDGTPNADDSNLFA
                     LDAGGATGVGLKIKTAAGVQQFPENTTPIPVEFAINGDGAHQLNYIASYVPIRADATI
                     GRADATVDFTVQYSTNNFTS"
     gene            865..2556
                     /gene="eptB"
                     /locus_tag="JN001_000467"
     CDS             865..2556
                     /gene="eptB"
                     /locus_tag="JN001_000467"
                     /EC_number="2.7.8.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418002.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid A phosphoethanolamine
                     7''-transferase"
                     /protein_id="HAY9051804.1"
                     /translation="MRYIKSITQQKLSFLLAIYIGLFMNGAVFYRRFGSYAHDFTVWK
                     GVSAVVELAATVLVTFFLLRLLSLFGRRSWRILASLVVLFSAGASYYMTFLNVVIGYG
                     IIASVMTTDIDLSKEVVGLNFILWLIAVSALPLILIWNNRCRYTLLRQLRTPGQRIRS
                     LAVVVLAGIMVWAPIRLLDIQQKKVERATGVDLPSYGGVVANSYLPSNWLSALGLYAW
                     ARVDESSDNNSLLNPAKKFTYQAPQNVDDTYVVFIIGETTRWDHMGIFGYERNTTPKL
                     AQEKNLAAFRGYSCDTATKLSLRCMFVRQGGAEDNPQRTLKEQNIFAVLKQLGFSSDL
                     YAMQSEMWFYSNTMADNIAYREQIGAEPRNRGKPVDDMLLVDEMQQSLGRNPDGKHLI
                     ILHTKGSHFNYTQRYPRSFAQWKPECIGVDSGCTKAQMINSYDNSVTYVDHFISSVID
                     QVRDKKAIVFYAADHGESINEREHLHGTPRELAPPEQFRVPMMVWMSDKYLENPANAQ
                     AFAQLKKEADMKVPRRHVELYDTIMGCLGYTSPDGGINENNNWCHIPQAKEAAAN"
     gene            2648..2724
                     /locus_tag="JN001_000468"
     tRNA            2648..2724
                     /locus_tag="JN001_000468"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2682..2684,aa:Pro,seq:cgg)
     gene            3495..3725
                     /locus_tag="JN001_000469"
     CDS             3495..3725
                     /locus_tag="JN001_000469"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051805.1"
                     /translation="MLKLGLSLVAMTVAASVQAKTLVYCSEGSPEGFNPQLFTSGTTY
                     DASSVPLYNRLVEFKIGTTEVIPGLAEKWEVS"
     gene            3735..5075
                     /locus_tag="JN001_000470"
     CDS             3735..5075
                     /locus_tag="JN001_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY9051806.1"
                     /translation="MYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQKNAQNPYH
                     KVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASILSKEYA
                     DAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIRYKAFDGYWGTKPQIDTLVFSITPD
                     ASVRYAKLQKNECQVMQYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKPLDDV
                     KVRQALTYAVNKDAIIKAVYQGAGVSAKNLIPPTMWGYNDDVQDYTYDPEKAKALLKE
                     AGLEKGFSIDLWAMPVQRPYNPNARCMAEMIQADWAKVGVQAKIVTYEWGEYLKRAKD
                     GEHQTVMMGWTGDNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARATDDHN
                     KRVELYKQSQVVMHDQAPALIIAHSTVFEPVRKEVKGYVVDPLGKHHFENVSIE"
     gene            5383..6402
                     /gene="dppB"
                     /locus_tag="JN001_000471"
     CDS             5383..6402
                     /gene="dppB"
                     /locus_tag="JN001_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppB"
                     /protein_id="HAY9051807.1"
                     /translation="MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGI
                     SPERHAQLLAELGLDKPMWQQYLHYIWGVMHGDLGISMKSRIPVWEEFVPRFQATLEL
                     GVCAMIFATAVGIPVGVLAAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVHW
                     NLTPASGRVSDMVFLDDSNPLTGFMLIDTAIWGEDGNFIDAVAHMILPAIVLGTIPLA
                     VIVRMTRSSMLEVLGEDYIRTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLA
                     GAILTETIFSWPGLGRWLIDALQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPR
                     IRHKK"
     gene            6412..7314
                     /gene="dppC"
                     /locus_tag="JN001_000472"
     CDS             6412..7314
                     /gene="dppC"
                     /locus_tag="JN001_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010426221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter permease DppC"
                     /protein_id="HAY9051808.1"
                     /translation="MSQVTENKVISAPVPMTPLQEFWHYFKRNKGAVVGLVYVVIVLF
                     IAIFANWIAPYNPAEQFRDALLAPPAWQEGGSMAHLLGTDDVGRDMLSRLMYGARLSL
                     LVGCLVVVLSLIMGVILGLIAGYFGGLVDNIIMRVVDIMLALPSLLLALVLVAIFGPS
                     IGNAALALTFVALPHYVRLTRAAVLVEVNRDYVTASRVAGAGAMRQMFINIFPNCLAP
                     LIVQASLGFSNAILDIAALGFLGMGAQPPTPEWGTMLSDVLQFAQSAWWVVTFPGLAI
                     LLTVLAFNLMGDGLRDALDPKLKQ"
     gene            7325..8308
                     /gene="dppD"
                     /locus_tag="JN001_000473"
     CDS             7325..8308
                     /gene="dppD"
                     /locus_tag="JN001_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP-binding protein"
                     /protein_id="HAY9051809.1"
                     /translation="MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGS
                     GKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISEKERRNLVGAEVAMIFQDPMTSL
                     NPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
                     RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVA
                     EAAHKIIVMYAGQVVETGDAHAIFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPG
                     KYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLDDAGRPTL"
     gene            8305..9309
                     /gene="dppF"
                     /locus_tag="JN001_000474"
     CDS             8305..9309
                     /gene="dppF"
                     /locus_tag="JN001_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide ABC transporter ATP binding subunit
                     DppF"
                     /protein_id="HAY9051810.1"
                     /translation="MSTQEATLQQPLLQAIDLKKHYPVKKGMFAPERLVKALDGVSFN
                     LERGKTLAVVGESGCGKSTLGRLLTMIETPTGGELYYQGQDLLKHDPQAQKLRRQKIQ
                     IVFQNPYGSLNPRKKVGQILEEPLLINTSLSKEQRREKALSMMAKVGLKTEHYDRYPH
                     MFSGGQRQRIAIARGLMLDPDVVIADEPVSALDVSVRAQVLNLMMDLQQELGLSYVFI
                     SHDLSVVEHIADEVMVMYLGRCVEKGTKDQIFNNPRHPYTQALLSATPRLNPDDRRER
                     IKLSGELPSPLNPPPGCAFNARCRRRFGPCTQLQPQLKDYGGQLVACFAVDQDENPQR
                     "
     gene            complement(9339..10610)
                     /locus_tag="JN001_000475"
     CDS             complement(9339..10610)
                     /locus_tag="JN001_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HAY9051811.1"
                     /translation="MQHNTLSKHNQKLPFTRYDFGWVLLCIGMAIGAGTVLMPVQIGL
                     KGIWVFITAAIIAYPATWVVQDIYLKTLSESDSCNDYTDIISHYLGKNWGIFLGVIYF
                     LMIIHGIFIYSLSVVFDSASYLKTFGLTDADLSQSLLYKVAIFAVLVAIASGGERLLF
                     KISGPMVVVKVGIIVVFGFAMIPHWNFANITAFPQASVFFRDVLLTIPFCFFSAVFIQ
                     VLNPMNIAYRKREADKVLATRLALRTHRISYITLIAVILFFAFSFTFSISHEEAVSAF
                     EQNISALALAAQVIPGHIIHITSTVLNIFAVLTAFFGIYLGFHEAIKGIILNLLSRII
                     DTKKINSRMLTLAICAFIVITLTIWVSFRVSVLVFFQLGSPLYGIVSCLIPFFLIYKV
                     AQLEKLRGFKAWLILLYGILLCLSPLLKLIE"
     gene            11086..11193
                     /locus_tag="JN001_000476"
     CDS             11086..11193
                     /locus_tag="JN001_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin Ldr family
                     protein"
                     /protein_id="HAY9051812.1"
                     /translation="MTLAELGMAFWHDLAAPVIAGILASMIVNWLNKRK"
     gene            complement(11280..12959)
                     /gene="bcsG"
                     /locus_tag="JN001_000477"
     CDS             complement(11280..12959)
                     /gene="bcsG"
                     /locus_tag="JN001_000477"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsG"
                     /protein_id="HAY9051813.1"
                     /translation="MTQFTQNTAMPSSLWQYWRGLSGWNFYFLVKFGLLWAGYLNFHP
                     LLNLVFAAFLLMPIPRYSLHRLRHWIALPIGFALFWHDTWLPGPESIMSQGSQVAGFS
                     TDYLIDLVTRFINWQMIGAIFVLLVAWLFLSQWIRITVFVVAILLWLNVLTLAGPSFS
                     LWPAGQPTTTVTTTGGNAAATVETTGGAPVVGDMPAQTTPPTTANLNAWLNNFYNAEA
                     KRKSTFPSSLPADAQPFELLVINICSLSWSDIEAAGLMSHPLWSHFDIEFKNFNSATS
                     YSGPAAIRLLRASCGQTSHTNLYQPANNDCYLFDNLSKLGFTQHLMMGHNGQFGGFLK
                     EVRENGGMQTELMDQTNLPVILLGFDGSPVYDDTTVLNRWLDVTEKDKNSRSATFYNT
                     LPLHDGNHYPGVSKTADYKARAQKFFDELDAFFTELEKSGRKVMVVVVPEHGGALKGD
                     RMQVSGLRDIPSPSITDVPVGVKFFGMKAPHQGAPIVIDQPSSFLAISDLVVRVLDGK
                     IFTEDNVDWKKLTSGLPQTAPVSENSNAVVIQYQDKPYVRLNGGDWVPYPQ"
     gene            complement(12956..13147)
                     /gene="bcsF"
                     /locus_tag="JN001_000478"
     CDS             complement(12956..13147)
                     /gene="bcsF"
                     /locus_tag="JN001_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsF"
                     /protein_id="HAY9051814.1"
                     /translation="MMTISDIIEIIVVCALIFFPLGYLARHSLRRIRDTLRLFFAKPR
                     YVKPAGTLRRTEKARATKK"
     gene            complement(13144..14715)
                     /gene="bcsE"
                     /locus_tag="JN001_000479"
     CDS             complement(13144..14715)
                     /gene="bcsE"
                     /locus_tag="JN001_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsE"
                     /protein_id="HAY9051815.1"
                     /translation="MRDIVGPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLAN
                     QTIASQAETAHVAVISMDSDPAKIFQLDDYQGPEKIKLFSMLNHEKGLYYLTRDLQCS
                     IDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLTHCSLLVINPGNNNDKQFSL
                     LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAE
                     IQPRSDEKRILSNVAVLEGAPPLSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQI
                     EPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANMVIPWNAPLSRCLTM
                     IESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGV
                     LVALRPVPGIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLP
                     TGDIFSNRMVWFEDDQISAELVQMRLLAPEQWGMPLPLTQSSKPVINAEHDGRHWRRI
                     PEPMRLLDDAVERSS"
     gene            14988..15176
                     /locus_tag="JN001_000480"
     CDS             14988..15176
                     /locus_tag="JN001_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051816.1"
                     /translation="MNNNEPDTLPDPAIGYIFQNDIVALKQAFSLPDIDYADISQREQ
                     LAAALKRWPLLAEFAQQK"
     gene            15188..15940
                     /gene="bcsQ"
                     /locus_tag="JN001_000481"
     CDS             15188..15940
                     /gene="bcsQ"
                     /locus_tag="JN001_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsQ"
                     /protein_id="HAY9051817.1"
                     /translation="MAVLGLQGVRGGVGTTTITAALAWSLQMLGENVLVVDACPDNLL
                     RLSFNVDFTHRQGWARAMLDGQDWRDAGLRYTSQLDLLPFGQLSIEEQENPQHRQTRL
                     SDICSGLQQLKASGRYQWILIDLPRDASQITHQLLSLCDHSLAIVNVDANCHIRLHQQ
                     ALPDGAHILINDFRIGSQVQDDIYQLWLQSQRRLLPMLIHRDEAIAECLAAKQPVGEY
                     RSDALAAEEILTLANWCLLNYSGLKTPVGSAS"
     gene            15937..18549
                     /gene="bcsA"
                     /locus_tag="JN001_000482"
     CDS             15937..18549
                     /gene="bcsA"
                     /locus_tag="JN001_000482"
                     /EC_number="2.4.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417990.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-forming cellulose synthase catalytic
                     subunit"
                     /protein_id="HAY9051818.1"
                     /translation="MSILTRWLLIPPVNARLIGRYRDYRRHGASAFSATLGCFWMILA
                     WIFIPLEHPRWQRIRAEHKNLYPHINASRPLDPVRYLIQTCWLLIGTSRKETPKPRRR
                     AFSGLQNIRGRYHQWMNELPERVSHKTQHLDEKKELGHLSAGARRLILGIIVTFSLIL
                     ALICVTQPFNPLAQFIFLMLLWGVALIVRRMPGRFSALMLIVLSLTVSCRYIWWRYTS
                     TLNWDDPVSLVCGLILLFAETYAWIVLVLGYFQVVWPLNRQPVPLPKDMSLWPSVDIF
                     VPTYNEDLNVVKNTIYASLGIDWPKDKLNIWILDDGGREEFRQFAQNVGVKYIARTTH
                     EHAKAGNINNALKYAKGEFVSIFDCDHVPTRSFLQMTMGWFLKEKQLAMMQTPHHFFS
                     PDPFERNLGRFRKTPNEGTLFYGLVQDGNDMWDATFFCGSCAVIRRKPLDEIGGIAVE
                     TVTEDAHTSLRLHRRGYTSAYMRIPQAAGLATESLSAHIGQRIRWARGMVQIFRLDNP
                     LTGKGLKFAQRLCYVNAMFHFLSGIPRLIFLTAPLAFLLLHAYIIYAPALMIALFVLP
                     HMIHASLTNSKIQGKYRHSFWSEIYETVLAWYIAPPTLVALINPHKGKFNVTAKGGLV
                     EEEYVDWVISRPYIFLVLLNLVGVAVGIWRYFYGPPTEMLTVVVSMVWVFYNLIVLGG
                     AVAVSVESKQVRRSHRVEMTMPAAIAREDGHLFSCTVQDFSDGGLGIKINGQAQILEG
                     QKVNLLLKRGQQEYVFPTQVARVMGNEVGLKLMPLTTQQHIDFVQCTFARADTWALWQ
                     DSYPEDKPLESLLDILKLGFRGYRHLAEFAPSSVKGIFRVLTSLVSWVVSFILRRPER
                     SETAQPSDQALAQQ"
     gene            18560..20899
                     /gene="bcsB"
                     /locus_tag="JN001_000483"
     CDS             18560..20899
                     /gene="bcsB"
                     /locus_tag="JN001_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HAY9051819.1"
                     /translation="MKRKLFWICAVAMGMSAFPSFMTQATPATQPLINAEPAVAAQTE
                     QNPQVGQVMPGVQGADAPVVAQNGPSRDVKLTFAQIAPPPGSMVLRGINPNGSIEFGM
                     RSDEVVTKAMLNLEYMPSPSLLPVQSQLKVYLNDELMGVLPVTKEQLGKKTLAQMPIN
                     PLFITDFNRVRLEFVGHYQDVCENPASTTLWLDVGRSSGLDLTYQTLNVKNDLSHFPV
                     PFFDPRDNRTNTLPMVFAGAPDVGLQQASAIVASWFGSRSGWRGQNFPVLYNQLPDRN
                     AIVFATNDKRPDFLRDHPAVKAPVIEMINHPQNPYVKLLVVFGRDDKDLLQAAKGIAQ
                     GNILFRGESVVVNEVKPLLPRKPYDAPNWVRTDRPVTFGELKTYEEQLQSSGLEPAAI
                     NVSLNLPPDLYLMRSTGIDMDINYRYTMPPVKDSSRMDISLNNQFLQSFNLSSKQEAN
                     RLLLRIPVLQGLLDGKTDVSIPALKLGATNQLRFDFEYMNPMPGGSVDNCITFQPVQN
                     HVVIGDDSTIDFSKYYHFIPMPDLRAFANAGFPFSRMADLSQTITVMPKAPNEAQMET
                     LLNTVGFIGAQTGFPAINLTVTDDGSTIQGKDADIMIIGGIPDKLKDDKQIDLLVQAT
                     ESWVKTPMRQTPFPGIVPDESDRAAETRSTLTSSGAMAAVIGFQSPYNDQRSVIALLA
                     DSPRGYEMLNDAVNDSGKRATMFGSVAVIRESGINSLRVGDVYYVGHLPWFERVWYAL
                     ANHPILLAVLAAISVILLAWVLWRLLRIISRRRLNPDNE"
     gene            20906..22012
                     /gene="bcsZ"
                     /locus_tag="JN001_000484"
     CDS             20906..22012
                     /gene="bcsZ"
                     /locus_tag="JN001_000484"
                     /EC_number="3.2.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulase"
                     /protein_id="HAY9051820.1"
                     /translation="MNVLRSGIVTMLLLAAFSVQAACTWPAWEQFKKDYISQEGRVID
                     PSDARKITTSEGQSYGMFFALAANDRAAFDNILDWTQNNLAQGSLKERLPAWLWGKKE
                     NSKWEVLDSNSASDGDVWMAWSLLEAGRLWKEQRYTDIGSALLKRIAREEVVTVPGLG
                     SMLLPGKVGFAEDNSWRFNPSYLPPTLAQYFTRFGAPWTTLRETNQRLLLETAPKGFS
                     PDWVRYEKDKGWQLKAEKTLISSYDAIRVYMWVGMMPDSDPQKARMLNRFKPMATFTE
                     KNGYPPEKVDVATGKAQGKGPVGFSAAMLPFLQNRDAQAVQRQRVADNFPGSDAYYNY
                     VLTLFGQGWDQHRFRFSTKGELLPDWGQECANSH"
     gene            21994..25467
                     /gene="bcsC"
                     /locus_tag="JN001_000485"
                     /pseudo
     CDS             21994..25467
                     /gene="bcsC"
                     /locus_tag="JN001_000485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026226.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis protein BcsC"
     gene            25549..27537
                     /gene="hmsP"
                     /locus_tag="JN001_000486"
     CDS             25549..27537
                     /gene="hmsP"
                     /locus_tag="JN001_000486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator HmsP"
                     /protein_id="HAY9051821.1"
                     /translation="MRVSRSLTIKQMAMVAAVVLVFVFIFCTVLLFHLVQQNRYNTAT
                     QLESIARSVREPLSSAILKGDIPEAEAILASIKPAGVVSRADVVLPNQFQALRKSFIP
                     ERPVPVMVTRLFELPVQISLGVYSLERPANPQPIAYLVLQADSFRMYKFVMSTLSTLV
                     TIYLLLSLILTVAISWCINRLILHPLRNIARELNAIPAQELVGHQLALPRLHQDDEIG
                     MLVRSYNLNQQLLQRHYEEQNENAMRFPVSDLPNKALLMEMLEQVVARKQTTALMIIT
                     CETLRDTAGVLKEAQREILLLTLVEKLKSVLSPRMILAQISGYDFAVIANGVQEPWHA
                     ITLGQQVLTIMSERLPIERIQLRPHCSIGVAMFYGDLTAEQLYSRAISAAFTARHKGK
                     NQIQFFDPQQMEAAQKRLTEESDILNALENHQFAIWLQPQVEMTSGKLVSAEVLLRIQ
                     QPDGSWDLPDGLIDRIECCGLMVTVGHWVLEESCRLLAAWQERGIMLPLSVNLSALQL
                     MHPNMVADMLELLTRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRVALDDF
                     GMGYAGLRQLQHMKSLPIDVLKIDKMFVEGLPEDSSMIAAIIMLAQSLNLQMIAEGVE
                     TEAQRDWLAKAGVGIAQGFLFARPLPIEIFEESYLEEK"
     gene            27720..29006
                     /locus_tag="JN001_000487"
     CDS             27720..29006
                     /locus_tag="JN001_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate/amino acid:cation symporter"
                     /protein_id="HAY9051822.1"
                     /translation="MKTSLFKSLYFQVLTAIAIGILLGHFYPEIGEQMKPLGDGFVKL
                     IKMIIAPVIFCTVVTGIAGMESMKAVGRTGAVALLYFEIVSTIALIIGLIIVNVVQPG
                     AGMNVDPATLDAKAVAVYADQAKDQGIVAFIMDVIPASVIGAFASGNILQVLLFAVLF
                     GFALHRLGSKGQLIFNVIESFSQVIFGIINMIMRLAPIGAFGAMAFTIGKYGVGTLVQ
                     LGQLIICFYITCILFVVLVLGSIAKATGFSIFKFIRYIREELLIVLGTSSSESALPRM
                     LDKMEKLGCRKSVVGLVIPTGYSFNLDGTSIYLTMAAVFIAQATNSQMDIVHQITLLI
                     VLLLSSKGAAGVTGSGFIVLAATLSAVGHLPVAGLALILGIDRFMSEARALTNLVGNG
                     VATIVVAKWVKELDHKKLDDVLNNRAPDGKTHELSS"
     gene            29226..30722
                     /locus_tag="JN001_000488"
     CDS             29226..30722
                     /locus_tag="JN001_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY9051823.1"
                     /translation="MQGTKIRLLAGGLLMMATAGYVQADALQPDPAWQQGTLSNGLQW
                     QVLTTPQRPSDRVEIRLLVNTGSLAESTQQSGYSHAIPRIALTQSGGLDAAQARSLWQ
                     QGIDPKRPMPPVIVSYDTTLFNLSLPNNRNDLLKEALSYLANATGKLTITPETINHAL
                     QSQDMVATWPADTKEGWWRYRLKGSTLLGHDPADPLKQPVEAEKIKDFYQKWYTPDAM
                     TLLVVGNVDARSVVDQINKTFGELKGKRETPAPVPTLSPLRAEAVSIMTDAVRQDRLS
                     IMWDTPWQPIRESAALLRYWRADLAREALFWHVQQALSASNSKDIGLGFDCRVLYLRA
                     QCAINIESPNDKLNSNLNLVARELAKVRDKGLPEEEFNALVAQKKLELQKLFAAYARA
                     DTDILMGQRMRSLQNQVVDIAPEQYQKLRQDFLNSLTVEMLNQDLRQQLSNDMALILL
                     QPKGEPEFNMKALQAAWDQIMAPSTAAAATSVATDDVHPEVTDIPPAQ"
     gene            complement(30818..31966)
                     /locus_tag="JN001_000489"
     CDS             complement(30818..31966)
                     /locus_tag="JN001_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709304.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9051824.1"
                     /translation="MFKSDAARTRQRLSARKGRTLPPGRGKFPHSTTESFRNTFWLKK
                     IMEHCFNIVDQQTTTAQTNANFLQIRFTTMSKKIAVIGECMIELSEKGADVKRGFGGD
                     TLNTSVYIARQVDPAALTVHYVTALGTDSFSQQMLDAWHGENVDISLTQRMENRLPGL
                     YYIETDSTGERTFYYWRNEAAAKFWLESEQSTAICEELANFDYLYLSGISLAILSPTS
                     REKLLSLLRECRANGGKVIFDNNYRPRLWASKEETQQVYQQMLECTDIAFLTLDDEDA
                     LWGQQPVEDVIARTHNAGVKEVVVKRGADSCLVSIAGEGLVDVPAVKLPKEKVIDTTA
                     AGDSFSAGYLAVRLTGGSAENAAKRGHLTASTVIQYRGAIIPREAMPA"
     gene            31979..32746
                     /gene="pdeH"
                     /locus_tag="JN001_000490"
     CDS             31979..32746
                     /gene="pdeH"
                     /locus_tag="JN001_000490"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417982.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase"
                     /protein_id="HAY9051825.1"
                     /translation="MIRQVIQRISNPEASIESLQERRFWLQCERAYTWQPIYQTCGRL
                     MAVELLTVVTHPLNPSQRLPPDRYFTEITVSHRMEVVKEQIDLLAQKADFFIEHGLLA
                     SVNIDGPTLIALRQQPKILRQIERLPWLRFELVEHIRLPKDSTFASMCEFGPLWLGDF
                     GTGMANFSALSEVRYDYIKIARELFVMLRQSPEGRTLFSQLLHLMNRYCRGVIVEGVE
                     TPEEWRDVQNSPAFAAQGWFLSRPAPIETLNTAVLAL"
     gene            32816..34876
                     /locus_tag="JN001_000491"
     CDS             32816..34876
                     /locus_tag="JN001_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY9051826.1"
                     /translation="MSKAGKITAAISGAFLLLIVVAIILIATFDWNRLKPTINQKVSA
                     ELNRPFAIRGDLGVVWERQKQETGWRSWVPWPHVHAEDIILGNPPDIPEVTMVHLPRV
                     EATLAPLALLTKTVWLPWIKLEKPDARLIRLSEKNNNWTFNLANDDNKDANAKPSAWS
                     FRLDNILFDQGRIAIDDKVSKADLEIFVDPLGKPLPFSEVTGSKGKADKEKVGDYVFG
                     LKAQGRYNGEPLTGTGKIGGMLALRGEGTPFPVQADFRSGNTRVAFDGVVNDPMKMGG
                     VDLRLKFSGDSLGDLYELTGVLLPDTPPFETDGRLVAKIDTEKSSVFDYRGFNGRIGD
                     SDIHGSLVYTTGKPRPKLEGDVESRQLRLADLGPLIGVDSGKGAEKSKRSEQKKGEKS
                     VQPAGKVLPYDRFETDKWDVMDADVRFKGRRIEHGSSLPISDLSTHIILKNADLRLQP
                     LKFGMAGGSIAANIHLEGDKKPMQGRADIQARRLKLKELMPDVELMQKTLGEMNGDAE
                     LRGSGNSVAALLGNSNGNLKLLMNDGLVSRNLMEIVGLNVGNYIVGAIFGDDEVRVNC
                     AAANLNIANGVARPQIFAFDTENALINVTGTASFASEQLDLTIDPESKGIRIITLRSP
                     LYVRGTFKNPQAGVKAGPLIARGAVAAALATLVTPAAALLALISPSEGEANQCRTILS
                     QMKK"
     gene            complement(35110..36432)
                     /locus_tag="JN001_000492"
     CDS             complement(35110..36432)
                     /locus_tag="JN001_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY9051827.1"
                     /translation="MQATATTLDHEQEYTPINSRNKVLVASLIGTAIEFFDFYIYATA
                     AVIVFPHIFFPQGDPTAATLQSLATFAIAFVARPIGSAVFGHFGDRVGRKATLVASLL
                     TMGISTVVIGLLPGYATIGIFAPLLLALARFGQGLGLGGEWGGAALLATENAPPRKRA
                     LYGSFPQLGAPIGFFFANGTFLLLSWLLTDEQFMSWGWRVPFIFSAVLVIIGLYVRVS
                     LHESPVFEKVAKAKKQVKIPLGTLLTKHVRVTVLGTFIMLATYTLFYIMTVYSMTFST
                     AAAPVGLGLPRNEVLWMLMMAVIGFGVMVPVAGLLADAFGRRKSMVIITTLLILFALF
                     AFNPLLGSGNPILVFAFLLLGLSLMGLTFGPMGALLPELFPTEVRYTGASFSYNVSSI
                     LGASVAPYIAAWLQTNYGLGAVGLYLAAMAGLTLIALLLTHETQHQSL"
     gene            complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="JN001_000493"
     CDS             complement(36843..37856)
                     /gene="yhjD"
                     /locus_tag="JN001_000493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YhjD"
                     /protein_id="HAY9051828.1"
                     /translation="MTQENEIKRPTQDLEHEPIKQLDNSEKGGKVSQALETVTTTAEK
                     VQRQPVIAHLIRATERFNDRLGNQFGAAITYFSFLSMIPILMVSFAAGGFVLASHPML
                     LQDIFDKILQNISDPTLAATLKNTINTAVQQRTTVGLVGLAVALYSGINWMGNLREAI
                     RAQSRDVWERSPQDQEKFWVKYLRDFISLIGLLIALIVTLSITSVAGSAQQMIISALH
                     LNSIEWLKPTWRLIGLAISIFANYLLFFWIFWRLPRHRPRKKALIRGTFLAAIGFEVI
                     KIVMTYTLPSLMKSPSGAAFGSVLGLMAFFYFFARLTLFCAAWIATAEYKDDPRMPGK
                     TQP"
     gene            complement(37905..38876)
                     /locus_tag="JN001_000494"
     CDS             complement(37905..38876)
                     /locus_tag="JN001_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9051829.1"
                     /translation="MLEKTINNAICALLFRCEQQSVKEMDKIHAMQLFIKVAELESFS
                     RAADFFALPKGSVSRQIQALEHQLGTQLLQRTTRRVKLTPEGMTYYQRAKDVLSNLNE
                     LDGLFQQDATSISGKLRIDIPPGIAKNLLLPRLSEFLYLHPGIELELSSHDRPVDILH
                     DGFDCVIRTGALPEDGVIARPLGKLTMVNCASPHYLTRFGYPQSPDDLTSHAIVRYTP
                     HLGVHPLGFEVASVNGVQWFKSGGMLTVNSSENYLAAGLAGLGIIQIPRIAVREALRA
                     GRLIEVLPGYRAEPLSLSLVYPQRRELSRRVNLFMQWLAGVMKEHLD"
     gene            39324..39926
                     /locus_tag="JN001_000495"
     CDS             39324..39926
                     /locus_tag="JN001_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY9051830.1"
                     /translation="MQIVMFDRQSIFIHGMKISLQQRIPGVSIQGASQADELWQKLES
                     YPEALVMLDGDQDGEFCYWLLQKTVVQFPEVKVLITATDCNKRWLQEVIHFNVLAIVP
                     RDSTVETFALAVNSAAMGMMFLPGDWRTTPEKDIKDLKSLSARQREILTMLAAGESNK
                     EIGRALNISTGTVKAHLESLYRRLEVKNRTQAAMMLNISS"
     gene            complement(39977..41626)
                     /gene="treF"
                     /locus_tag="JN001_000496"
     CDS             complement(39977..41626)
                     /gene="treF"
                     /locus_tag="JN001_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreF"
                     /protein_id="HAY9051831.1"
                     /translation="MLNQKIQNPNPDELMIEVDLCYELDPYELKLDEMIEAEPEPEMI
                     EGLPASDALTPADRYLELFEHVQSAKIFPDSKTFPDCAPKMDPLDILIRYRKVRRHRD
                     FDLRKFVENHFWLPEVYSSEYVSDPQNSLKEHIDQLWPVLTREPQDHIPWSSLLALPQ
                     SYIVPGGRFSETYYWDSYFTMLGLAESGREDLLKCMADNFAWMIENYGHIPNGNRTYY
                     LSRSQPPVFALMVELFEEDGVRGARRYLDHLKMEYAFWMDGAESLIPNQAYRHVVRMP
                     DGSLLNRYWDDRDTPRDESWLEDVETAKHSGRPPNEVYRDLRAGAASGWDYSSRWLRD
                     TGRLASIRTTQFIPIDLNAFLFKLESAIANISALKGEKETEALFRQKASARRDAVKRY
                     LWDDENGIYRDYDWRREQLALFSAAAIVPLYVGMANHEQADRLANAVRSRLLTPGGIL
                     ASEYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYLEQHKLI
                     EKYHIADGVPREGGGGEYPLQDGFGWTNGVVRRLIGLYGEP"
     gene            42030..43427
                     /gene="ccp"
                     /locus_tag="JN001_000497"
     CDS             42030..43427
                     /gene="ccp"
                     /locus_tag="JN001_000497"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c peroxidase"
                     /protein_id="HAY9051832.1"
                     /translation="MKMVSRITAIGLAGVAICYLGLSGYVWYHDNKRSKQADVQASAV
                     SENNKVLGFLREKGCDYCHTPSAELPAYYYIPGAKQLMDYDIKLGYKSFNLEAVRAAL
                     LADKPVSQSDLNKIEWVMQYETMPPTRYTALHWAGKVSDEERAEILAWIAKQRAEYYA
                     SNDTAPEHRNEPVQPIPQKLPTDAQKVALGFALYHDPRLSADSTISCAHCHALNAGGV
                     DGRKTSIGVGGAVGPINAPTVFNSVFNVEQFWDGRAATLQDQAGGPPLNPIEMASKSW
                     DEIIAKLEKDPQLKAQFLEVYPQGFSGENITDAIAEFEKTLITPDSPFDKWLRGDENA
                     LTAQQKKGYQLFKDNKCATCHGGIILGGRSFEPLGLKKDFNFGEITAADIGRMNVTKE
                     ERDKLRQKVPGLRNVALTAPYFHRGDVPTLDGAVKLMLRYQVGKELPQEDVDDIVAFL
                     HSLNGVYTPYMQDKQ"
     gene            43638..>43879
                     /locus_tag="JN001_000498"
     CDS             43638..>43879
                     /locus_tag="JN001_000498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY9051833.1"
                     /translation="MDQKLLTDFRSELLDSRFGAKAISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT        10543 a        11003 c        11920 g        10413 t
ORIGIN      
        1 ccgttagcac taccggaaaa ttacccgctg ccggggatta tagcggtatt gctaccatac
       61 atgtcgaact ggagtaacag tcatgaagcg aacaatactt gcgttatgcc tgctgcctct
      121 ttccttttcg tcattcgcgg caaccacgga tttagggccg aaaggaacat tgaaattcac
      181 ccttaaaatc agccagggtg cttgcgaact ggtgaaagac agcgttgagg ttgacatggg
      241 caccgcggtt ctcaaaaagc cggtaagaat cggaacggaa attaatccca ctcctttttc
      301 catcggcctg aaaaactgta gcgaagtggt cagagcctac gtgactatgg acggtacacc
      361 caatgcagac gactcaaatc tttttgcgct ggatgcgggt ggcgctacag gcgttgggct
      421 gaaaatcaaa accgctgctg gagtacaaca gttcccggaa aatacaacgc cgataccggt
      481 tgagtttgca attaacggtg atggcgcaca tcaactgaac tatatcgcca gctacgtgcc
      541 tattcgcgcc gatgcaacta ttggtcgcgc agatgcaacg gtcgacttta ctgtacagta
      601 cagtacgaat aatttcacat cttaagggcc agttaactgg ccctttttac tgctttttgt
      661 aacgctaaag tctcttttca aacttgcatt tttgtaaatt tgtgcttcat gcacactctt
      721 tccccacact ttttcgcttt gctgtggtct acttattcgc gcgtgtagat tttacttatc
      781 tgactacctc cgcacttttc ccctgccggg cctgaaaagc cgctaagcag ggtgttatca
      841 cctgtttgtc cagggtttgt ttgcatgaga tacatcaaat cgattacaca gcagaagctg
      901 agctttttgc ttgcaatcta tattggcctt tttatgaatg gcgcggtttt ttatcgccgc
      961 ttcggcagct atgcgcacga ttttaccgtc tggaaaggcg tttctgctgt tgttgaactg
     1021 gccgccaccg tactggtgac cttcttttta ctacgtcttc tatcgctgtt tggccgccgc
     1081 agctggcgta ttctggcgtc gctggtggtg ctcttttccg caggtgccag ctattacatg
     1141 accttcctta atgtggtcat tggttatggc atcatcgctt ccgtcatgac caccgatatc
     1201 gacctgtcaa aagaagttgt tggtctgaac tttattctct ggttaatcgc cgttagtgca
     1261 ttgcctctta tccttatctg gaataaccgc tgtcgctaca ccttgctccg acaactgcga
     1321 accccagggc agcgtattcg cagcctggcg gtcgtcgtac tggcgggtat tatggtttgg
     1381 gcaccgattc gtttgctgga tatccagcag aagaaagtgg agagggcgac cggcgttgat
     1441 ttgccgagtt atggcggtgt cgtagcgaac tcttatctgc catcaaactg gctttctgcg
     1501 ttggggctgt atgcctgggc gcgggtcgat gaatcttccg ataataattc attgcttaat
     1561 ccggcgaaga agtttacata ccaggctcca caaaacgttg atgatactta tgtcgtgttt
     1621 atcatcggtg aaaccacgcg ttgggaccat atgggtattt tcggctatga gcgtaatacc
     1681 acgccgaaac tggcccagga gaaaaatctg gcggcgttcc gtggttactc ctgtgatacc
     1741 gcaaccaaac tctcactgcg ttgcatgttt gtacgtcagg ggggcgcgga agataatccg
     1801 cagcgcacat taaaagaaca gaacattttc gcggttctga agcagttagg attcagttct
     1861 gacctctacg ctatgcagag cgaaatgtgg ttctacagca acacgatggc ggacaacatt
     1921 gcttatcgtg agcagattgg tgcggagcca cgtaatcgtg gcaagccggt agatgatatg
     1981 ttgctggtag acgaaatgca gcaatcgcta gggcgcaacc cggatggtaa gcatctgatc
     2041 attctgcata ccaaaggttc gcattttaac tacacccagc gttatccgcg tagcttcgcg
     2101 cagtggaagc cggaatgtat tggtgttgat agcggctgta ccaaagcgca gatgatcaac
     2161 tcctatgaca actcggtgac ctatgtggat cactttatct ccagcgtgat tgatcaggtt
     2221 cgcgataaga aagcgattgt gttctacgca gctgaccacg gtgagtcaat taatgaacgc
     2281 gagcacctgc acggcacgcc gcgtgaattg gcaccgccgg agcagttccg cgtaccgatg
     2341 atggtctgga tgtcagataa atatctggaa aatccggcca atgcgcaggc atttgcgcag
     2401 ctgaaaaaag aagccgacat gaaagtgcca cgccgtcacg tagagctgta cgataccatc
     2461 atgggttgtc ttggctatac ttcaccggat ggtggaatta acgaaaacaa caactggtgt
     2521 cacatcccgc aggcaaaaga ggcagcggct aactaagcgg cctgctgact ttctcgccga
     2581 tcaaaaggca ttttgctatt aagggattga cgagggcgta tctgcgcagt aagatgcgcc
     2641 ccgcattcgg tgattggcgc agcctggtag cgcacttcgt tcgggacgaa ggggtcggag
     2701 gttcgaatcc tctatcaccg accaaattcg aaaagcctgc tcagcgagca ggcttttttg
     2761 catttgaagc ccatgaggat gagaacctcc gggggctggg aggttcgact cgacgtaggc
     2821 ctgataagac gcgccagcgt cgcatcaggc aacggcaccg cacttattgt cggatgcggc
     2881 gcgaccgcct tattcgacca acacaccaca cattttcctg ccaactttgc gccccatatc
     2941 tcactatcca ttaacggatt tgtgacagaa accattgtct ttttttatat ttgcttaaat
     3001 ctttttttgc gttacttatg gctggcgctg gcattttccg ctgtgcgttt tagcgttcat
     3061 ggtattaatc gctcagatat ccaccttttc ctcagatttt tttcattaaa tgcataaaac
     3121 ttaatcacca aatgttgcta aatattaagc tgattgttct ggttatgttg gagtagcaca
     3181 aatttctctg ctgcaaatag ctgtttgaag ttttttaatc tttgtttgtg ggttctcacc
     3241 gttggtgtaa atcccggttg gctgtattga cgttttcaca ttctgttgac agattgtagg
     3301 tcacgagggg cattttatgg aggatccgca ctgttacact gatgttaatt agtacggcat
     3361 ccccacctca taacgttgac ccgaccgggc aaaaaacaaa aaaggtcagg tagcgacaac
     3421 ccactgcaaa gggttaaaac aacaaacatc acaattggag cagaataatg cgtatttcct
     3481 tgaaaaagtc agggatgctg aagcttggtc tcagcctggt ggctatgacc gtcgcagcaa
     3541 gtgttcaggc taaaactctg gtttattgct cagaaggctc tccggaaggg tttaacccgc
     3601 agctgtttac ctccggcacc acctatgacg cctcttccgt accgctttat aaccgcctgg
     3661 ttgaatttaa aatcggcacc actgaagtga taccgggcct cgctgaaaag tgggaagtca
     3721 gctaagacgg taaaatctat accttccatc tgcgtaaagg tgtgaagtgg cacgacaata
     3781 aagaattcaa accgacgcgt gaactgaacg ccgatgacgt ggtgttctcg ttcgaccgtc
     3841 agaaaaacgc gcaaaacccg taccataaag tctctggcgg cagctacgaa tacttcgaag
     3901 gcatgggctt gccggagctg atcagtgaag tgaaaaaggt ggacgacaac acagttcagt
     3961 tcgtactgac tcgcccggaa gcgccgttcc tcgctgatct ggcaatggac ttcgcctcta
     4021 ttctgtcaaa agaatatgct gatgcgatga tgaaagccgg tacaccggaa aaactggacc
     4081 tcaacccaat cggaaccggt ccgttccagt tacagcagta ccaaaaagat tcccgtatcc
     4141 gctacaaagc gtttgatggc tactggggca ccaaaccgca gatcgatacg ctggtcttct
     4201 ctattacccc tgatgcttcc gtgcgttacg cgaaattgca gaagaatgaa tgccaggtga
     4261 tgcagtaccc gaacccggca gatatcgctc gcatgaagca ggataaatcc atcaacctga
     4321 tggaaatgcc ggggctgaac gtcggctacc tctcgtataa cgtgcagaaa aaaccgctgg
     4381 atgacgtgaa agttcgccag gcactgacct acgcggtgaa caaagacgcg atcatcaaag
     4441 cggtttatca gggcgcgggt gtatcagcga aaaacctgat cccgccaacc atgtggggct
     4501 ataacgacga cgttcaggat tacacctacg atcctgaaaa agcgaaagcc ttgctgaaag
     4561 aagcgggtct ggaaaaaggt ttctccatcg acctgtgggc gatgccggta caacgtccgt
     4621 ataacccgaa cgctcgctgc atggcggaga tgattcaggc agactgggcg aaagtgggcg
     4681 tgcaggccaa aatcgtcacc tacgaatggg gtgagtacct caagcgtgcg aaagatggcg
     4741 aacatcagac ggtaatgatg ggctggactg gcgataacgg ggacccggat aacttcttcg
     4801 ccaccctgtt cagctgcgcc gcctctgaac aaggttctaa ctactcaaaa tggtgctaca
     4861 aaccgtttga agatctgatt caaccggcgc gtgctaccga cgaccataac aaacgcgttg
     4921 aactgtacaa gcaatcgcag gtggtgatgc acgatcaggc tccggcactg atcatcgctc
     4981 actccaccgt gtttgaaccg gtacgcaaag aagtcaaagg ctatgtggtt gatccattag
     5041 gcaaacatca cttcgaaaat gtctctatcg aataattaaa agccatacaa gactgatggt
     5101 aaaggcaaaa ctgcctgatg tgctccgctt atcaggccta cgaaaattct gcaatgtatt
     5161 gaatttacac gattttgtag gccggataag gcgttaacgc cgcatccggc ataaacaaag
     5221 cgcactttgt caacaatctg tatacccggt ggcgctgtgc ctctgcgtgc agcgccatcc
     5281 ggcagcaata cttcattctc tgtccgacaa gggcgggaat tgatttgtga gcaatacaga
     5341 cacgcagttc caggctgcgg gtcactatag agaatccggg ttatgttgca gtttattctc
     5401 cgacgtttgg gactcgtcat ccccacgttt atcggtatta cccttctcac atttgccttt
     5461 gtccacatga tcccgggcga tccggtgatg atcatggcag gcgaacgtgg gatctcccct
     5521 gagcgtcacg cgcagctgct ggctgaactc ggcttagata aaccgatgtg gcagcagtat
     5581 ctccattaca tttggggcgt aatgcacggc gatctaggca tttcaatgaa aagccgaatt
     5641 ccagtatggg aagagttcgt gccgcgcttt caggccacgc tggaacttgg cgtctgcgcg
     5701 atgatttttg ctacggcagt cggtattccg gttggtgtgc tggctgcggt taaacgcggt
     5761 tccattttcg atcacactgc agttggcctg gcgctgaccg gctactcgat gccgatcttc
     5821 tggtggggca tgatgctgat catgctggtt tcggtgcact ggaacctgac gcccgcctcc
     5881 ggtcgcgtga gcgatatggt gttcctcgat gactccaatc cgttaaccgg ttttatgcta
     5941 atcgacaccg ccatctgggg tgaagacggc aactttatcg atgccgtcgc ccatatgatc
     6001 ttgcctgcca ttgtgctggg tactattccg ctggcggtca ttgtgcgtat gacacgctcc
     6061 tcgatgctgg aagtgctggg cgaggattac atccgcaccg cgcgcgccaa agggctaacc
     6121 cgcatgcggg tgattatcgt ccatgcgctg cgtaacgcga tgctgccggt ggtgaccgtt
     6181 atcggcctgc aggtgggaac attgctggcg ggggcgattc tgaccgaaac catcttctcg
     6241 tggcccggtc tgggacgctg gttgattgac gcactgcaac gccgcgacta tccggtagtg
     6301 cagggcggcg tattgctggt ggcgacgatg attatcctcg tcaacttgct ggtcgatctg
     6361 ctgtacggcg tggtgaaccc gcgtattcgt cataagaagt aaggggacat catgtcacag
     6421 gttactgaaa ataaagtgat tagcgcaccg gtgccgatga ccccgttaca ggagttctgg
     6481 cactatttta aacgcaacaa aggcgcggtc gtcgggctgg tttacgtcgt catcgtgctg
     6541 ttcatcgcga tctttgccaa ctggattgca ccctataacc cggcggaaca gttccgcgat
     6601 gcactgctcg ccccgccagc ctggcaggaa ggcggcagca tggcgcactt gctgggcacc
     6661 gatgacgtag gccgtgatat gctgtcgcgc ctgatgtacg gtgcgcgcct gtcgctgctg
     6721 gttggctgtc tggtagttgt gttatcgctg attatgggcg ttattctcgg cctgatcgcc
     6781 ggttactttg gcggcctagt cgataacatc attatgcgcg tggtcgatat catgctggcg
     6841 ctgccaagtc tgctgctggc gctggtgctg gtggcaattt tcggcccgtc gattggtaac
     6901 gccgcgctgg cactgacctt cgttgccttg ccgcactatg tgcgcttaac ccgcgccgcc
     6961 gtgctggtgg aagttaaccg cgattacgtc accgcgtctc gcgtggcggg tgccggggcg
     7021 atgcgtcaga tgtttattaa catcttcccg aactgccttg cgccgctgat tgttcaggcg
     7081 tcgctcggtt tctctaacgc cattctcgat atagctgctc ttggtttcct cggcatgggg
     7141 gcacagccgc caacgccgga gtggggcacc atgctctccg acgtgttgca gttcgcgcaa
     7201 agcgcctggt gggtcgtgac cttcccgggt ctggcgatcc tgctgacggt gctggcattt
     7261 aacctgatgg gtgacggtct gcgtgacgcg ctcgatccca aactgaagca gtaagaggtt
     7321 cgagatggcg ttattaaatg tagataaatt atcggtgcat ttcggcgacg aaagcgcacc
     7381 gttccgcgcc gtagaccgca tcagctacag cgtaaaacag ggcgaagtgg ttgggattgt
     7441 gggtgagtcc ggctccggta agtcggtcag ttccctggcg attatggggc tgattgatta
     7501 tccgggccgc gtaatggcgg aaaaactggt gtttaacggt caggatttgc agcgtatatc
     7561 agaaaaagag cgccgcaacc tggtgggtgc cgaagtggcg atgatcttcc aggacccgat
     7621 gaccagcctt aacccgtgct acaccgtggg tttccagatc atggaagcga ttaaggtgca
     7681 tcagggcggc aacaaaagta cccgccgtca gcgggcgatt gacctgctga atcaggtcgg
     7741 tattcccgat ccggcttcgc gtctggatgt ttacccgcat cagctttccg gcggcatgag
     7801 ccagcgcgtg atgatcgcca tggcgattgc ctgtcgacca aaactgctga ttgccgatga
     7861 gccgaccacc gcgctggacg tgaccattca ggcgcaaatc atcgaactac tgctggagct
     7921 acagcagaaa gagaacatgg cgctggtgtt gattacccat gacctggcgc tggtggcgga
     7981 agctgcgcat aaaatcattg tgatgtatgc aggccaggtg gtggaaacgg gcgatgcgca
     8041 cgccatcttc catgcgccgc gtcacccgta tactcaggca ttgctgcgtg cgctgccaga
     8101 atttgctcag gacaaagaac gtctggcgtc gttgccaggt gtcgttcccg gcaagtacga
     8161 ccgcccgaac ggctgcctgc ttaacccgcg ctgcccctat gccactgaca gatgtcgcgc
     8221 tgaagaaccg gcgctgaata tgctcgctga cgggcgtcag tccaaatgcc attacccact
     8281 tgatgatgcc gggaggccga cactatgagt acgcaagagg ccaccctgca acaaccgctg
     8341 ttgcaggcta tcgacctgaa aaaacattat ccggtgaaga aaggcatgtt cgcgccggaa
     8401 cgtctggtta aagcgctgga tggcgtttcg tttaaccttg aacgtggcaa aacgctggca
     8461 gtagtgggcg aatctggctg cggtaaatcg accctcggtc ggttgctgac gatgattgaa
     8521 acgcccaccg gtggcgagct gtattaccag gggcaggatc tgcttaagca cgatccgcag
     8581 gcgcagaagc tgcgtcggca gaaaatccag atcgtcttcc agaaccctta cggttcgctg
     8641 aatccgcgta aaaaagtcgg gcaaattctt gaagagccgc tgctgatcaa caccagctta
     8701 agcaaagaac agcgtcggga aaaagccctg tcgatgatgg cgaaagtcgg cctgaaaacc
     8761 gagcactatg accgctatcc gcatatgttc tccggcggtc agcgtcagcg tatcgccatc
     8821 gcccgtggtc tgatgctcga cccggatgtg gtgattgccg atgaaccggt ttccgcgctg
     8881 gatgtttcag tgcgcgcgca ggtgctgaat ctgatgatgg atttgcagca ggagttgggg
     8941 ctgtcttatg tctttatctc ccacgacctg tcggtggtgg agcacattgc tgatgaagtg
     9001 atggtgatgt acctgggccg ctgcgtggag aagggaacga aagaccaaat cttcaataac
     9061 ccgcgccatc cgtacactca ggcgctactt tccgcgacgc cgcgcctgaa cccggacgat
     9121 cgccgcgagc gcatcaagct cagcggtgaa ctaccaagcc cactgaatcc accgccgggt
     9181 tgcgccttca acgcccgctg tcgtcggcgc ttcggcccct gcacccagtt gcagccgcag
     9241 ctaaaagact acggcggtca actggtagct tgttttgctg ttgatcagga tgaaaatccg
     9301 cagcgttaac tcacaaaacc ggggccatgc gctccggttt actcaatcag cttcaacagt
     9361 ggcgacaagc atagcaaaat gccgtaaagc agaattagcc aggctttaaa tccgcgaagt
     9421 ttttccagtt gtgcgacttt atagatcagg aaaaacggaa tgaggcacga cacaatgcca
     9481 tataacgggc ttcccaactg aaagaacacc agcaccgata cacgaaacga aacccaaatc
     9541 gtcaacgtaa tgacgataaa agcgcagatc gccagagtca gcatgcgtga gttaattttc
     9601 ttggtatcaa taattcggct taacagattg agaataatgc ctttaatagc ctcgtggaaa
     9661 ccgagataaa tgccaaagaa tgcggtcagt acggcaaaga tattcagcac cgtagaggtg
     9721 atatgaatga tatgtccagg gatcacctgc gcggccagtg ccagtgccga gatattttgt
     9781 tcaaaggcag aaacggcttc ttcgtggcta attgagaagg taaacgaaaa ggcaaaaaac
     9841 aggatcaccg cgatgagcgt gatataacta attcggtggg tacgcagcgc gagccgggtt
     9901 gccagtactt tatctgcttc ccgtttacga taggcaatat tcattgggtt aagtacctga
     9961 ataaataccg cagaaaagaa gcaaaatgga attgtaagca ggacatcgcg gaaaaagacg
    10021 gaggcttgcg ggaaggcggt tatattggcg aaattccagt gcgggatcat cgcaaaaccg
    10081 aacacgacaa taatccctac tttgaccacc accattggcc cggaaatctt aaacagtaat
    10141 cgttcaccac cagacgcaat cgctaccagt acggcgaaaa tagcgacttt ataaagtaga
    10201 gattgtgaaa gatcggcatc ggttaaaccg aaggttttca ggtacgaggc gctgtcgaaa
    10261 accacggaga gagagtagat aaaaatcccg tggataatca tcaaaaagta gataaccccg
    10321 aggaaaattc cccagttctt ccccaggtaa tgactgataa tatcggtgta gtcattacag
    10381 gaatcgcttt cagaaagggt ttttaaataa atgtcctgca ctacccaggt ggcaggataa
    10441 gcaatgatcg ctgcggtaat aaatacccaa attcccttca agccaatttg tactggcatc
    10501 agcacggttc cggcaccaat cgccatgcct atgcataata aaacccagcc gaagtcgtag
    10561 cgtgtaaacg gcaatttctg attgtgtttc gatagtgtgt tgtgctgcat aaagtcctgt
    10621 ccagaaagaa gtcggcctcg caaaaatgaa taaacccagt ttctcttgcg caacaggtgg
    10681 agaagtcgaa tacgcagtat gtaaaaaatg aggcaacaga ttcactgggg aggtcgcgag
    10741 gaggcgcaat tctacaaaat tgcgcatttc actaccagtc tggagtcagc ccggatatga
    10801 actgcaacta ttgcaaataa agaaattaag ctggaaggca tcgcgcaatg aggaagattg
    10861 ccgggtgctg acagtaaaaa gcaatcgtaa aatcagcggc aagccgaaag ggttccggtg
    10921 aggcgcaatg ttgcgggggc tttatccctg gtggcattgg ttgctggaga gagaaaaccc
    10981 ccgcacgttg caggtatgca cctgacaaca tcacgggggc taatcttgaa cccaaacaac
    11041 tcaagaatag ccgcgaaacg ttggcattac aacacaggcg gctatatgac gctcgcagaa
    11101 ctgggcatgg ccttctggca tgatttagcg gctccggtca ttgctggcat tcttgccagt
    11161 atgatcgtga actggctgaa taagcggaag taacgtgtca tgcgggcgtc aggctgccgt
    11221 aatggcaatt tgcgcccgga tcaggccgca gaggttaaac tctgcggcct ttttcgtgct
    11281 tactgcgggt aaggcaccca gtcgccgccg ttcaggcgaa cgtacggttt atcctggtat
    11341 tgaataacta ctgcatttga gttctcggag accggtgctg tttgtggcaa cccactggtg
    11401 agttttttcc agtcaacatt gtcttcggtg aaaatcttgc catcaagaac gcgaaccacc
    11461 agatcggaga tagccaggaa gctgctcggt tggtcgatga caatcggtgc cccctgatgt
    11521 ggtgccttca tgccgaagaa tttcacccca acggggacgt ctgtgataga cgggctaggg
    11581 atatcacgta ggccagatac ctgcattctg tcgcccttca gcgcgccgcc gtgttccggc
    11641 accacgacca ccatcacttt acgacccgat ttctccagtt cagtaaagaa ggcgtccagt
    11701 tcatcaaaga atttctgcgc ccgcgctttg taatccgctg ttttgctgac ccccggataa
    11761 tggttgccgt catgcagtgg aagcgtgttg tagaacgtgg cactacggct gtttttatct
    11821 ttttcggtaa cgtccagcca gcggttaagc acggtggtat cgtcataaac cggcgaacca
    11881 tcaaagccca gcaaaataac cggcagattt gtttgatcca tcaattcagt ctgcatgccg
    11941 ccattttcgc gaacttcttt caaaaaaccg ccgaactggc cgttatgtcc catcatcagg
    12001 tgctgggtaa agcccagttt cgaaaggtta tcaaacagat agcagtcgtt atttgccggt
    12061 tgatacagat tagtgtgcga agtctgcccg cagctggcgc gcagtaaacg gatcgccgcc
    12121 gggccactgt aggaggtggc ggagttaaag ttcttgaact caatatcgaa atgcgaccac
    12181 agtggatgcg acatcaaccc ggcggcttct atatccgacc aggaaagcga acagatgtta
    12241 atcaccagta gttcaaatgg ctgagcatca gcgggcagcg aagacgggaa ggtcgattta
    12301 cgtttcgcct ccgcgttata gaaattattc agccaggcgt taaggttcgc cgttgttggc
    12361 ggtgtagttt gtgcgggcat atcacccact accggtgcgc cacccgtcgt ctcaacggtt
    12421 gccgctgcgt taccacccgt cgttgttaca gtggtcgtcg gttgtccggc tggccacaag
    12481 gagaaacttg gtcccgccag ggtaagtacg ttcagccata gcagtatggc aaccacaaaa
    12541 acggtaatgc gaatccattg tgacaggaat aaccaggcca ctaataaaac aaaaatggcc
    12601 ccaatcatct gccagttaat aaagcgtgtg acaaggtcga ttaaataatc ggtactgaac
    12661 cccgccacct gcgaaccctg gctcattatg ctttccgggc caggcaacca ggtgtcatgc
    12721 cagaacaaag caaagccgat cggcagggca atccagtggc gcaagcgatg caggctgtag
    12781 cgcggaatgg gcatcagcag aaacgcggca aacaccaaat tgaggagcgg atggaagtta
    12841 agatatcccg cccacaacag gccgaactta accagaaaat agaagttcca gccggaaagg
    12901 ccgcgccagt attgccagag ggaagaaggc atggcggtat tttgcgtaaa ttgagtcatt
    12961 ttttggttgc cctggctttt tccgtgcggc gtaatgtccc ggccggttta acataacgag
    13021 gtttagcaaa gaacaaacgt aaggtgtcgc gaatgcgtcg caaagagtgc cgcgccagat
    13081 agcccagcgg gaaaaatatc agtgcgcaaa cgacaataat ttcaatgata tcgctgatgg
    13141 tcatcatgat gagcgctcca cagcatcatc taacagtcgc atgggttctg gtattcgtcg
    13201 ccagtggcga ccatcgtgct cggcattgat gaccggttta gaactttgcg ttaaaggcag
    13261 cggcatgccc cattgttctg gggcaagcag gcgcatctgc accagctcgg cactgatttg
    13321 atcatcttca aaccagacca tacggtttga gaaaatgtcg ccagtaggca atgggaaaat
    13381 atgattcaac gcggtatcca gatcgttaat ccgacagaat gagagaaaca gcaccagccg
    13441 attaccgcca atggtcatga tatcgccggt acggttaggg cgacacagcg tcagggcttg
    13501 ttcaacgcgg atacccggta ccggacgtag ggcaaccaga acgcctttac cgtgggcagg
    13561 taatagaggg ttattcatca tgttgttgac ggcattacag aacacatccc acttctggaa
    13621 accacgcagt ttgagcggct gggtcattga cagcaaggta gtgatatctt ccggcacata
    13681 gcgactaaac ttctgccctt gcacgctttc gatcatcgtc agacaacggg agagtggcgc
    13741 attccacgga ataaccatat ttgcaccgca ggccaataac aaacgttcat cggtggcgcg
    13801 caggctagcg gtattttccc gcacgaggat tttcatcgca ctaccgcgct ggcgacgcag
    13861 ggtatgaatg ctgcgggcca gtggctcgat ttgcgcattt tgctgtaaag aaaagaccac
    13921 cgtcgccgcc tgagcggtac gggcttcatt gaacaggact tcgttattgt tgaacagttg
    13981 ccagtgttcc gatagcggcg gcgcaccttc cagtacagca acattactca gaatgcgttt
    14041 ttcgtcgctg cgtggttgga tctccgcctc ttcgctttga actaatgtcc agataccatt
    14101 ttgttgctga acgctaagct gctgacgggc gctgacccct ttttcgttgc accagaaggc
    14161 aatatccagc aaatgttggt caccctgaaa acgcaaactg gcaagaccaa aaagtgaacg
    14221 gtattcctca agcaacaatg aaaattgttt atcgttatta tttccgggat taattaccaa
    14281 aagcgaacaa tgggttaacc tgctccattt attcatttta tccaaccatg agcgaagccg
    14341 ctcggcagga atgttttgcc atgcgttatt tgcgcaaaca agaataaaaa ggtaattatg
    14401 gggatcaata gaacactgca aatcacgggt caaatagtat agaccttttt catgatttag
    14461 cattgaaaat aattttattt tttccggccc ttgataatca tctaattgaa agattttcgc
    14521 cggatcgctg tccatgctaa tgaccgcgac gtgtgcggtt tcagcctggg atgcaattgt
    14581 ttgattcgcc agactgatag catcttcatg gcgatcgacg ttaaaccacc agacgccgcc
    14641 tgctggcata tgtcgcagct catcccataa tgatgagata ccgatagaga atacagggcc
    14701 cacaatgtcc ctcatgtcac cattttgtct gattatcagt ttactagcga aagctaagaa
    14761 ataaacctac cattgaaatt aaaacttatc agatttagca tgtgaatcaa tttagaaggt
    14821 cacaagacgt gtgattttag tcttttcgtt tttaactttt tctgttgcgt aacggaaagt
    14881 caaaaagtga gcaaattccc gtctcgccgt aaacaataaa ccggcgaaat gctcacggtt
    14941 agaattgtct catgaacggt acggttattt catagggatc aagcaaaatg aataacaatg
    15001 aaccagatac tctgcctgat cccgcgatag gctatatctt ccagaatgat attgtggcgt
    15061 taaagcaggc attttcactg cctgatattg attatgccga tatttcccaa cgcgaacagt
    15121 tggccgcggc attaaaacgc tggccgttgc tggcagagtt tgcgcaacaa aagtagggga
    15181 ttggtgaatg gccgtactgg gattgcaggg ggtgcgggga ggcgtgggga caacaaccat
    15241 caccgccgca ttagcctggt cattacaaat gttgggagaa aatgtcctgg tggtcgatgc
    15301 ctgcccggac aacttgttgc gcctgtcatt taatgttgat tttacccacc gtcagggctg
    15361 ggccagagcg atgctggatg gccaggactg gcgtgacgct gggttgcgct acacctcgca
    15421 gctcgatttg ctgccttttg gtcagttatc cattgaagaa caagaaaatc cacagcacag
    15481 gcaaacccgg ctgagcgata tttgctccgg cttacagcaa ctaaaagcca gcgggcgtta
    15541 ccagtggatt ttaatcgact taccgcgtga tgcctcgcag ataacccacc agctgctgag
    15601 tttgtgcgat cactcgctgg caatcgtcaa tgtggatgcc aactgccata tccgactgca
    15661 tcagcaagcg ctgccggatg gcgcacatat tttgattaat gacttccgta ttggcagtca
    15721 ggttcaggac gatatttacc agctttggtt gcaaagccag cgccgattac tgccgatgct
    15781 cattcatcgt gatgaagcga tagctgaatg cctggcggct aagcaaccag taggtgaata
    15841 tcgcagtgat gcgctggcgg ctgaagagat actgacgctg gcgaactggt gcctgttgaa
    15901 ctactccggg ctgaaaacgc cagtcgggag tgcatcatga gtatcctgac ccggtggttg
    15961 cttatcccgc cggtcaacgc gcggcttatc gggcgttatc gcgattatcg tcgtcacggt
    16021 gcgtcggctt tcagcgcgac gctcggctgt ttctggatga tcctggcctg gatttttatt
    16081 ccgctggagc acccgcgctg gcagcgtatt cgcgcagaac ataaaaacct gtatccgcat
    16141 atcaacgcct cgcgtccgct ggacccggtc cgttatctca ttcaaacatg ctggttactg
    16201 atcggtacat cgcgcaaaga aacgccgaaa ccgcgcaggc gggcattttc aggtctgcag
    16261 aatattcgtg gacgttacca tcaatggatg aacgagctgc ctgagcgcgt tagccataaa
    16321 acacagcatc ttgatgagaa aaaagagctc ggtcatttga gtgccggggc gcggcggttg
    16381 atcctcggta tcatcgtcac cttctcgctg attctggcgt taatctgcgt tactcaaccg
    16441 tttaacccgc tggcgcagtt tatcttcctg atgctgctgt ggggtgtagc gctgatcgta
    16501 cggcggatgc cggggcgctt ctcggcgcta atgttgattg tgctgtcgct gaccgtttct
    16561 tgccgttata tctggtggcg ttacacctct acgctgaact gggacgatcc ggtcagcctg
    16621 gtgtgcgggc ttattctgct cttcgctgaa acgtacgcgt ggattgtgct ggtgctcggc
    16681 tacttccagg tcgtatggcc gctgaatcgt cagccggtgc cattgccgaa agatatgtcg
    16741 ctgtggccgt cggtggatat ctttgtcccg acttacaacg aagatctcaa cgtggtgaaa
    16801 aataccattt acgcctcgct gggtatcgac tggccgaaag acaaactgaa catctggatc
    16861 ctcgatgacg gcggcaggga agagtttcgc cagtttgcgc aaaacgtggg ggtgaaatat
    16921 atcgcccgca ccactcatga acatgcgaaa gcgggcaaca tcaacaatgc gctgaaatat
    16981 gccaaaggcg agttcgtatc gattttcgac tgcgaccacg taccaacgcg atcgttcctg
    17041 caaatgacca tgggctggtt cctgaaagag aaacagctgg cgatgatgca gacgccgcac
    17101 cacttcttct cgccggaccc gtttgaacgc aacctggggc gttttcgtaa aacgccgaac
    17161 gaaggcacgc tgttctatgg tctggtgcag gatggcaacg atatgtggga cgccactttc
    17221 ttctgcggtt cctgtgcagt aattcgtcgc aaaccattgg atgaaattgg cggtattgct
    17281 gtcgaaacgg taaccgaaga tgcgcacacg tctctgcgcc tgcaccgtcg tggctacacc
    17341 tctgcatata tgcgtattcc gcaggcggcg gggctggcga ccgaaagtct gtcggcgcat
    17401 atcggtcagc gtattcgctg ggcacgcggg atggtgcaaa tcttccgtct cgataacccg
    17461 cttaccggta aagggctgaa attcgcccag cggctgtgct acgtcaacgc catgttccac
    17521 ttcttgtcgg gcattccacg actgatcttc ctgactgcgc cgctggcgtt cctgctgctt
    17581 catgcctaca tcatctatgc gccagcgttg atgatcgccc tgttcgtgct gccgcatatg
    17641 atccatgcca gcctgaccaa ctcgaagatc cagggcaaat atcgccactc tttctggagt
    17701 gaaatctacg aaacggtgct ggcgtggtat atcgcaccac cgacgctggt ggcgctgatt
    17761 aacccgcaca aaggcaaatt taacgtcacc gccaaaggtg gactggtgga agaagagtac
    17821 gtcgactggg tgatctcgcg gccctacatc ttccttgttc tgctcaacct ggtgggtgtt
    17881 gcggtcggca tctggcgcta cttctatggc ccgccaaccg agatgctcac cgtggtcgtc
    17941 agtatggtgt gggtgttcta caacctgatt gttcttggcg gcgcagttgc ggtatcggta
    18001 gaaagcaaac aggtacgccg atcgcaccgc gtggagatga cgatgcccgc ggcaattgcc
    18061 cgcgaagatg gtcacctctt ttcgtgtacc gttcaggatt tctccgacgg tggtttgggg
    18121 atcaagatca acggtcaggc gcagattctg gaagggcaga aagtgaatct gttgcttaaa
    18181 cgcggtcagc aggaatacgt cttcccgacc caggtggcgc gcgtgatggg taatgaagtt
    18241 gggctgaaat taatgccgct caccacccag caacatatcg attttgtgca gtgtacgttt
    18301 gcccgtgcgg atacatgggc gctctggcag gacagctacc cggaagataa gccgctggaa
    18361 agtctgctgg atattctgaa gctcggcttc cgtggctacc gccatctggc ggagtttgcg
    18421 ccttcttcgg tgaagggcat attccgtgtg ctgacttctc tggtttcctg ggttgtatcg
    18481 tttattctgc gccgcccgga gcggagcgaa acggcacaac catcggatca ggctttggct
    18541 caacaatgat gataacgcga tgaaaagaaa actattctgg atttgtgcag tggctatggg
    18601 gatgagtgcg ttcccctctt tcatgacgca ggcgacgcca gcaacgcaac cactgatcaa
    18661 tgctgagcca gctgtagccg cccagacgga acaaaatccg caggtggggc aagtgatgcc
    18721 gggcgtgcag ggcgctgatg cgccagtcgt ggcgcagaac ggtccttcgc gtgatgtgaa
    18781 gctgaccttt gcgcaaattg cgcctccgcc gggcagcatg gtgctacgtg gcattaaccc
    18841 gaacggcagc attgagtttg gtatgcgcag cgatgaagtg gtgacgaagg cgatgctcaa
    18901 cctcgaatac atgccatcgc catcgttact gcctgtccag tcgcagttaa aggtttatct
    18961 caatgatgag ctgatgggcg tactgccagt gaccaaagaa cagttgggta aaaaaacgct
    19021 ggcgcaaatg cccattaacc cactgtttat taccgacttc aaccgtgtgc ggctggagtt
    19081 tgtcggccat tatcaggacg tgtgcgaaaa cccggccagc accacgcttt ggctggatgt
    19141 tgggcggagc agtggactgg atctgaccta tcagaccctg aatgtgaaga atgacctgtc
    19201 acacttcccg gtgccattct ttgacccgcg cgataaccgt actaacacct tgccgatggt
    19261 ctttgcgggt gcgccggatg ttgggctgca acaagcatct gccattgtcg cctcgtggtt
    19321 tggttcgcgt tctggctggc gtgggcagaa cttcccggtg ctctataacc aactgccgga
    19381 tcgtaatgcc attgtctttg caaccaacga caaacggccg gacttcctgc gcgatcatcc
    19441 ggcggtaaaa gccccggtga ttgagatgat caaccatccg cagaatcctt acgtcaaact
    19501 gctggtggtg tttggtcgtg acgacaaaga cctgttgcag gcagcgaaag gtatcgctca
    19561 gggtaacatt ctgttccgtg gtgaaagcgt ggtagtgaat gaagtgaaac cgctgctacc
    19621 gcgtaagccg tacgatgcgc cgaactgggt acgtaccgat cgtccggtca catttggcga
    19681 actgaaaacc tatgaagaac agttacaatc cagcggtctt gagccagcag cgattaacgt
    19741 ttcgctaaac ctgccgccgg atctctacct gatgcgcagt accggcattg atatggatat
    19801 taattaccgc tacaccatgc cgccggtgaa agacagttcg cggatggata tcagcctgaa
    19861 taaccagttc ctgcaatcct tcaacctgag cagcaaacag gaggcgaacc gcctgctgct
    19921 gcggattccg gtattacaag gtttgctgga tggcaaaaca gatgtctcta ttccggcgct
    19981 gaaactgggc gcgaccaacc agctgcgctt cgactttgag tatatgaacc cgatgccggg
    20041 cggttcggtg gataactgta ttaccttcca gccggtgcag aatcatgtgg tgattggtga
    20101 cgactccacc atcgacttct cgaagtatta ccacttcatc ccgatgccgg atctacgcgc
    20161 ctttgctaac gcgggcttcc cattcagccg gatggcggat ctgtcgcaaa ccatcaccgt
    20221 gatgccgaaa gcgcctaacg aagcacagat ggaaacgttg ctgaatactg ttggttttat
    20281 cggcgcacag acgggcttcc cggcgattaa tctgacggtg accgatgatg gcagcaccat
    20341 tcagggcaaa gatgccgaca tcatgatcat cggtggtatc ccggacaaac tgaaagacga
    20401 taagcagatc gacctattgg tgcaggcgac cgaaagctgg gtgaaaacac cgatgcgcca
    20461 gaccccgttc cccggcattg tgccggacga gagcgatcgc gcggcagaaa cccggtcaac
    20521 gctgacctct tccggtgcga tggcggcggt gattggcttc cagtcgccgt ataacgacca
    20581 gcgcagcgtg attgcgctgt tggcagatag cccacgcggt tatgaaatgc ttaacgatgc
    20641 ggtgaacgat agcggcaaac gcgccaccat gttcggttcg gtcgcggtga tccgcgagtc
    20701 cggtatcaac agcctacgtg ttggcgacgt ttattacgta ggtcatctgc cgtggttcga
    20761 gcgcgtgtgg tatgcgctgg caaaccatcc gattctgctg gcggtgctgg cggctatcag
    20821 tgtgatattg ctggcatggg tactgtggcg tctgctgcga attattagtc gtcgtcgtct
    20881 taacccggat aacgagtaat tgaagatgaa tgtgttgcgt agtggaatcg tgacgatgct
    20941 gttgttggct gcctttagtg ttcaggcagc ctgtacctgg cctgcctggg agcagtttaa
    21001 aaaggattac atcagtcagg aagggcgcgt catcgacccc agcgacgcgc gcaaaatcac
    21061 cacctccgaa gggcaaagtt acggtatgtt ctttgccctg gcggctaacg accgtgcagc
    21121 tttcgataat attctcgact ggacgcagaa caatctcgct cagggttctt taaaagaacg
    21181 tttgcccgcc tggctgtggg gcaagaaaga gaacagtaag tgggaagtgc tggacagcaa
    21241 ttcggcctcc gatggtgatg tctggatggc ctggtcgttg ctggaggcgg ggcgtttgtg
    21301 gaaagagcag cgttataccg acatcggcag cgcgttgcta aaacgtatcg cgcgggagga
    21361 agtggtgacg gtgcctgggc tgggttccat gttgttaccg ggcaaagtgg gttttgctga
    21421 ggataacagc tggcgtttta accccagcta cctgccgccg acgctggcgc agtatttcac
    21481 ccgctttggc gcgccgtgga ctacgctgcg cgaaaccaat caacgtttat tgctggaaac
    21541 cgccccgaaa ggcttttcgc cagactgggt gcgttatgag aaagacaaag gctggcagct
    21601 aaaagccgaa aaaacattga tcagcagcta cgacgccatc cgcgtttaca tgtgggtagg
    21661 catgatgcct gacagcgatc cgcagaaagc gcggatgctc aaccggttta aaccgatggc
    21721 gacattcact gagaaaaacg gttatccgcc ggaaaaagtg gatgtggcta cggggaaagc
    21781 gcagggtaaa ggaccagttg gtttttctgc cgccatgctg ccctttttac aaaaccgcga
    21841 tgcgcaggcc gttcagcgtc agcgcgtggc cgataacttt cccggcagcg atgcctatta
    21901 caactatgtg ctgaccctgt ttggacaagg ctgggatcaa caccgtttcc gcttctcgac
    21961 aaaaggtgag ttattacctg actggggcca ggaatgcgca aattcacact aaacatattc
    22021 acgctttccc tcggtctggc cgtcatgccg atggtcgagg cagcaccaac cgctcagcaa
    22081 cagttgctgg agcaagttcg gttaggcgaa gcgacccatc gtgaagatct ggtgcaacag
    22141 tcgttatatc ggctggaact tattgatccg aataacccgg acgtcgttgc cgcccgtttc
    22201 cgttctttgt tacgttaggg cgatattgat ggcgcgcaaa aacagctcga tcggctgtcg
    22261 cagttagcgc cgagttcaaa tgcgtataaa tcgtcgcgga ctacgatgct actttccacg
    22321 ccggatggtc gtcaggcact gcaacaggca cgattgcagg cgacgaccgg tcatgcagaa
    22381 gaagctgtgg cgagttacaa caaactgttc aacggtgcgc cgccggaagg tgacattgct
    22441 gtcgagtact ggagtacggt ggcgaaaatt ccggctcgcc gtggcgaagc gattaatcag
    22501 ttaaaacgca tcaatgcgga tgcaccgggc aatacgggcc tgcaaaacaa tctggcgcta
    22561 ttgctgttta gtagcgatcg ccgtgacgaa ggttttgccg tcctggaaca gatggcaaaa
    22621 tcgaacgccg ggcgcgaagg ggcctctaaa atctggtacg ggcagattaa agacatgccc
    22681 gtcagtgatg ccagtgtgtc ggcgctgaaa aaatatctct cgatctttag tgatggcgat
    22741 agcgtggcgg ctgcgcaatc gcaactggca gaacagcaaa aacagctggc cgatcctgct
    22801 ttccgcgctc gtgcgcaagg tttagcggcg gtggactctg gtatggcggg taaagccatt
    22861 cccgaactac aacaggcggt gcgggcgaac ccgaaagaca gtgaagctct gggggcgctg
    22921 ggccaggcgt attctcagaa aggcgatcgc gccaatgcag tggcgaatct ggaaaaagcc
    22981 ctcgcactgg acccgcacag cagcaacaac gacaaatgga acagtctgct gaaagtaaac
    23041 cgctactggc tggcgatcca gcagggcgat gctgcgctga aagccaataa tcctgaccgg
    23101 gcagaacgcc tgttccagca ggcgcgtaat gtcgataaca ccgacagtta tgcagtgctg
    23161 gggctgggcg atgtggcgat ggcgcgaaaa gattatcccg ccgccgaacg ttattatcag
    23221 cagaccttgc gtatggacag cggcaacact aacgccgtgc gcgggctggc aaatatttac
    23281 cgccagcaat cgccagaaaa agctgaagcg tttatcgcct cgctctctgc cagtcagcgg
    23341 cgtagcattg atgatatcga acgcagcctg caaaacgacc gtctggcaca gcaggcagag
    23401 gcactggaaa accagggcaa atgggcgccg gcggcagcac ttcagcggca acgactggcg
    23461 ctggaccccg gcagcgtatg gattacttac cgactttcgc aggatctctg gcaggccgga
    23521 caacgcagcc aggccgatac gttaatgcgc aatctggcgc agcagaagtc gaacgacccg
    23581 gagcaggttt acgcttacgg gctgtacctc tctggtcatg accaggacag agcggcgctg
    23641 gcgcatatca acagcctgcc gcgcgcgcag tggaacagca atattcagga gctggttaat
    23701 cgactgcaaa gcgatcaggt gctggaaacc gctaatcgcc tgcgagaaag cggcaaagaa
    23761 gctgaagcgg aagcgatgct gcgtcagcaa ccaccttcca cgcgtattga cctcacgctg
    23821 gctgactggg cgcagcagcg acgtgattac accgccgccc gcgctgcata tcagaatgtc
    23881 ctgacgctgg agccaactaa cgccgatgcc attctggggc tgacggaagt ggatattgct
    23941 gccggtgaca cagcggcggc acgtagccag ctggcgaaac tgcccgctac cgataacgcc
    24001 tcgctgaaca cacagcggcg cgtggcgctg gcgcaggcgc agcttggaga taccgcagcg
    24061 gcgcagcaga cgtttaataa gttgatcccg caggcaaaat ctcagccacc gtcgatggaa
    24121 agcgcgatgg tgctgcgcga cggtgcgaag tttgaagcgc aggcgggcga tccaaagcag
    24181 gcgctggaaa cctacaaaga cgccatggtc gcatccggtg tgactacgac gcgtccgcag
    24241 gataacgaca cattcacccg actgacccgt aacgacgaga aagatgactg gctgaaacgc
    24301 ggcgtgcgca gcgatgcggc gggcctctat cgccagcagg atcttaacgt caccctcgag
    24361 cacgattact ggggttcgag cggcaccggt ggttactccg atctgaaagc gcacactacc
    24421 atgttgcagg tggatgcgcc gtattctgac gggcggatgt tctttcgcag tgatttcgtc
    24481 aatatgaacg tcggcagttt ctccactaat gccgatggca aatgggatga caactggggc
    24541 acctgtacat tacaggactg tagtggcaac cgcagccagt cggactccgg tgccagcgtg
    24601 gaggtcggct ggcgaaatga cgtctggagc tgggatatcg gtaccacgcc gatgggcttc
    24661 aacgtggtgg atgtggtcgg cggcatcagt tacagcgatg atatcgggcc gctgggttac
    24721 accgttaacg cccaccgtcg gcccatctcc agttctttgc tggcctttgg tgggcaaaaa
    24781 gactccccga gcaataccgg gaaaaaatgg ggtggcgtac gtgccgacgg tgtggggcta
    24841 agtctgagct acgataaagg tgaagcaaac ggcgtctggg catcgcttag tggcgaccag
    24901 ttaaccggta aaaatgtcga agataactgg cgcgtgcgct ggatgacggg ctattactat
    24961 aaggtcatta accagaacaa tcgccgcgtc acaatcggcc tgaacaacat gatctggcat
    25021 tacgacaaag atctgagtgg ctactcactc ggtcagggcg gttactacag tccgcaggaa
    25081 tacctgtcgt ttgctatacc ggtgatgtgg cgggagcgca cggaaaactg gtcgtgggag
    25141 ctgggggcgt ctggctcgtg gtcgcattca cgcaccaaaa ccatgccgcg ttatccgctg
    25201 atgaatctga tcccgaccga ctggcaggaa gaagctgcgc ggcaatccaa cgatggcggc
    25261 agcagtcagg gcttcggcta cacggcgcgg gcattacttg aacgacgtgt tacttccaac
    25321 tggtttgttg gcacggcaat tgatatccag caggcgaaag attacgcacc cagccatttc
    25381 ctgctctacg tacgttattc cgccgccgga tggcagggtg acatggattt accgccgcag
    25441 ccgctgatac cttacgccga ctggtaagtt ttcagatagc gcctctctta atgccgctgc
    25501 gatcgggtat actcgggcgg caatctggga tttccggggg gagacaattt gcgcgtaagt
    25561 cgctcgttaa caatcaagca gatggcaatg gtggcagccg ttgtcctggt gttcgttttt
    25621 attttttgca ccgttttgct gttccatctg gtccagcaga atcgctataa cacggctacg
    25681 caactggaaa gcattgctcg ctctgtacgc gaacccttat cttcagctat tttgaaaggc
    25741 gatattcccg aagcggaagc tattcttgcc agcattaaac cggcaggcgt ggtcagccgt
    25801 gccgatgtag tgctgcctaa ccagttccag gcgctgcgta aaagttttat tccagagcgc
    25861 ccggtgccgg taatggttac tcgcctgttt gagctaccgg ttcaaatctc gctgggcgtt
    25921 tactcgctcg aacgtccggc aaacccgcag ccaattgcct atctggtact acaggcggat
    25981 tccttccgta tgtataagtt cgtgatgagc accctctcaa cgttagtgac catttactta
    26041 cttttgtcgc ttatcctgac cgtcgccatc agctggtgca ttaaccgcct gattttgcat
    26101 ccgttacgca atattgctcg cgaacttaac gccatcccag cccaggagct tgttggtcac
    26161 caactggcat taccgcgtct gcatcaggac gatgaaatcg gtatgttggt gcgcagttac
    26221 aacctcaacc agcaattgct gcagcgccat tatgaagaac agaacgaaaa tgcgatgcgc
    26281 ttcccggtgt cggatttgcc gaacaaagcc ttgctgatgg agatgctgga gcaggttgtc
    26341 gcgcgtaaac aaaccaccgc gctgatgatc atcacctgtg aaaccctgcg tgatactgcg
    26401 ggcgtgctga aagaggcgca acgagaaatt ctgctgctga cgctggtgga aaaactcaaa
    26461 tcggtactgt cgccacgtat gatcctcgcg cagattagcg gttatgactt tgctgtcatt
    26521 gccaacggtg tacaggaacc gtggcacgca atcaccttag gtcagcaagt gctcactatc
    26581 atgagcgagc gcctgccgat tgaacgtatt caactccgtc cgcactgtag cattggcgtg
    26641 gcgatgttct acggcgatct caccgccgaa cagctttaca gtcgcgctat ttctgcggca
    26701 tttaccgctc gccataaagg caagaatcag attcagttct ttgatccgca gcagatggaa
    26761 gccgcccaga agcggttgac ggaagagagc gatatcctta atgcactgga aaatcatcag
    26821 tttgctattt ggttacagcc acaggtcgag atgaccagcg gtaaactggt cagtgcggaa
    26881 gtgttactgc gtatccagca accggatggc agttgggacc tgccggatgg cttaatcgat
    26941 cgcattgagt gctgtgggct gatggttacc gtcggtcact gggtgctgga agagtcctgt
    27001 cgattgcttg cagcctggca agagcgcggc attatgctgc ccttgtcggt aaacctctct
    27061 gcgctgcaac tgatgcaccc aaatatggtg gcggatatgc tggaactgtt aacccgctat
    27121 cgcattcaac cgggaacact gattctggaa gtgacagaaa gccgacgtat tgacgaccct
    27181 catgctgcgg tggcaatcct ccgtccgctg cgcaatgccg gagttcgggt ggcgctggat
    27241 gatttcggca tgggctacgc agggctgcgt cagctgcagc atatgaaatc gttgccaatc
    27301 gacgtactga aaatcgacaa aatgtttgtt gaaggcttgc cggaagatag cagcatgatt
    27361 gctgcaatta tcatgctggc gcagagcctg aacttacaaa tgattgccga aggcgtggag
    27421 actgaagcac aacgcgactg gctggcaaaa gcgggcgttg gtattgccca gggcttcctt
    27481 tttgctcgcc cactccctat tgaaatcttc gaagagagtt acctggaaga aaagtagcta
    27541 ccccaaactg attacaaaac tttaaaaagt gctggtttgt gcgagccagc tcaaactttt
    27601 taaccttttt gtttcaatta tgatccaggt acatttctgt gatgttgtct gggtgttatt
    27661 ttaaggccgc aggtacctca taaccttaca agacctgtag ttttactaaa ggacacccta
    27721 tgaaaacctc tctgtttaaa agcctttact ttcaggtcct gacagcgata gccattggta
    27781 ttctccttgg ccatttctat cctgaaatag gcgagcaaat gaaaccgctt ggcgacggct
    27841 tcgttaagct cattaagatg atcatcgctc ctgtcatctt ttgtaccgtc gtaacgggca
    27901 ttgcgggcat ggaaagcatg aaggcggtcg gtcgtaccgg cgcagtcgca ctgctttact
    27961 ttgaaattgt cagtaccatc gcgctgatta ttggtcttat catcgttaac gtcgtgcagc
    28021 ctggtgccgg aatgaacgtc gatccggcaa cgcttgatgc gaaagcggta gcggtttacg
    28081 ccgatcaggc gaaagaccag ggcattgtcg ccttcattat ggatgtcatc ccggcgagcg
    28141 tcattggcgc atttgccagc ggtaacattc tgcaggtgct gctgtttgcc gtactgtttg
    28201 gttttgcgct ccaccgtctg ggcagcaaag gccaactgat ttttaacgtg atcgaaagtt
    28261 tctcgcaggt catcttcggc atcatcaata tgatcatgcg tctggcacct attggtgcgt
    28321 tcggggcaat ggcgtttacc atcggtaaat acggcgtcgg cacactggtg caactggggc
    28381 agctgattat ctgtttctat attacctgta tcctgtttgt ggtgctggta ttgggttcaa
    28441 tcgctaaagc gactggtttc agtatcttca aatttatccg ctacatccgt gaagaactgc
    28501 tgattgtact ggggacttca tcttccgagt cggcgctgcc gcgtatgctc gacaagatgg
    28561 agaaactcgg ctgccgcaaa tcggtggtgg ggctggtcat cccgacaggc tactcgttta
    28621 accttgatgg cacatcgata tacctgacaa tggcggcggt gtttatcgcc caggccacta
    28681 acagtcagat ggatatcgtc caccaaatca cgctgttaat cgtgttgctg ctttcttcta
    28741 aaggggcggc aggggtaacg ggtagtggct ttatcgtgct ggcggcgacg ctctctgcgg
    28801 tgggccattt gccggtagcg ggtctggcgc tgatcctcgg tatcgaccgc tttatgtcag
    28861 aagctcgtgc gctgactaac ctggtcggta acggcgtagc gaccattgtc gttgctaagt
    28921 gggtgaaaga actggaccac aaaaaactgg acgatgtgct gaataatcgt gcgccggatg
    28981 gcaaaacgca cgaattatcc tcttaatctc accacttatg cccgcactcc cttccccgag
    29041 tgcgggtgtt tgcgcataat tgacccctgt gcctgaactt accacctggg tgagttcagg
    29101 tttatttcac ttcttccgtg acattttcat gttcttgcgg tctaacacga agtgttttta
    29161 acgtcattta gactgactga caacgggcag ttttttatta ccaggatagt tgatcagggg
    29221 ttcacatgca gggcacaaaa attcgacttt tagcgggcgg tttgctgatg atggccactg
    29281 ctggctatgt gcaggcagat gcgctccagc ctgatccagc atggcaacag gggacgcttt
    29341 ccaacggttt acagtggcaa gtgctgacca ccccccagcg tcccagcgat cgtgttgaaa
    29401 ttcgcctgct ggttaatacc ggttcgctcg ccgaaagtac acaacagagc ggttacagtc
    29461 acgccatccc tcgtattgcg ctaacgcaaa gcggtggcct tgacgcagca caggcgcgtt
    29521 cattgtggca gcaggggatc gaccctaaac gcccgatgcc gccggtaatt gtctcttatg
    29581 acaccacgct gtttaatctg agtttgccca ataaccgtaa cgatttgctg aaagaagcgc
    29641 tctcttatct ggcaaatgcc actggcaaat tgaccatcac accagaaacc atcaaccacg
    29701 cgctgcaaag tcaggacatg gtggcaacct ggcctgccga tactaaagag ggctggtggc
    29761 gctatcgtct gaaagggtca accttgttag gtcacgatcc tgccgatccg ctgaaacaac
    29821 ccgttgaagc ggaaaaaatt aaagatttct atcagaaatg gtacaccccg gatgcaatga
    29881 cgctactggt ggtgggaaac gtggatgcgc gctcggttgt cgaccaaatc aacaaaacgt
    29941 ttggcgaact gaaaggcaaa cgtgaaacgc cagctccggt gccgacgctt tctccgctgc
    30001 gtgcggaagc ggtgagtatt atgactgacg cggtgcgtca ggaccggtta tctatcatgt
    30061 gggatacgcc gtggcagccg attcgtgaat cagccgcact gctgcgctac tggcgtgcgg
    30121 acctggcccg cgaggcgctg ttctggcatg ttcagcaagc gttaagcgcc agtaacagca
    30181 aagacatcgg tcttggattt gactgccgtg tgctgtatct gcgtgcgcag tgtgccatca
    30241 acatcgaatc accaaacgac aagctgaaca gcaaccttaa tctggtggcg cgtgaactgg
    30301 cgaaggttcg cgataaaggt ctgccggaag aagagttcaa tgcgttagtg gcgcaaaaga
    30361 aactggagct gcagaaactg tttgccgcct atgcgcgggc tgataccgat attctgatgg
    30421 gtcagcggat gcgttcgttg caaaatcagg tcgtcgatat cgcgccggag cagtatcaga
    30481 aactgcggca ggatttcctt aacagcctga cggtggagat gttaaatcag gatctgcgtc
    30541 agcagttgtc gaatgatatg gcgttaatac tgctgcagcc gaaaggcgag ccggaattta
    30601 acatgaaagc gttgcaggcg gcctgggatc aaatcatggc cccatcgact gctgctgccg
    30661 ccacctctgt cgccacggat gacgtacatc ctgaagtgac ggatattcca cctgcacagt
    30721 aatgcctgat ggtgatgagt tagcacaacc atcaggtatt tatggatgag ctggatagag
    30781 gggtaacact ttatccagcc ttttgcatat gctgcgttta cgctggcatc gcctcacgcg
    30841 ggataatcgc gccgcgatac tgaataacgg tacttgcggt caggtgcccg cgtttcgccg
    30901 cgttttccgc actgccgccc gtcaaacgta ccgccagata accggcgctg aaagagtcgc
    30961 cagctgcggt ggtatcgatc actttttctt tcggcagttt caccgccgga acatccacta
    31021 acccttcgcc agcaatggac accaggcaag aatccgcccc gcgtttcacc accacttctt
    31081 tcacgcccgc gttatgggtg cgcgcaatga cgtcttccac cggctgttga ccccacagcg
    31141 cgtcttcatc gtccagcgtc aggaaggcga tatccgtgca ttccagcatt tgttggtaca
    31201 cctgctgtgt ctcttctttg ctggcccaca ggcgcggacg atagttattg tcgaaaatca
    31261 cttttccgcc gttggcgcgg cattcgcgca gcagggaaag cagcttttcg cggctggtcg
    31321 ggcttaagat cgccaggcta atcccgctca ggtagagata atcgaaattc gccagctctt
    31381 cgcaaatcgc cgtagactgc tcactctcca gccagaattt ggcggcggct tcgttccgcc
    31441 agtagtagaa cgtacgctcg ccggtgctgt cggtttcaat gtagtaaagg cccggcagac
    31501 ggttttccat ccgttgggtc agggaaatat caacgttctc gccgtgccag gcgtccagca
    31561 tctgctggct aaaactgtcc gttcccagcg ccgttacgta atgaacggtt aatgccgcag
    31621 gatcgacctg acgggcgata tagacggaag tgttcagggt atcgccgccg aaaccgcgct
    31681 taacgtccgc gcctttctcg gaaagctcaa tcatgcattc gccaatcacg gcaatctttt
    31741 tggacatagt cgtgaacctg atctgtaaaa aattagcgtt agtttgcgct gtggtggttt
    31801 gctggtcaac aatattaaaa cagtgttcca ttattttttt gagccagaac gtattcctga
    31861 aagattccgt tgtggagtga ggaaatttac cccggccagg cggtaaagtt ctgcccttac
    31921 gcgccgataa tctttgtcga gtccgggcag catcactttt aaacacagga catctttgat
    31981 gataaggcag gttatccagc gaataagcaa ccctgaagca agcatcgaga gcttgcagga
    32041 acggcgtttt tggttgcagt gtgagcgtgc ttacacctgg cagccgatct atcaaacatg
    32101 cgggcggtta atggccgtgg agctattaac ggtggtcacg catcccttga acccttcgca
    32161 acgcctgccg ccggatcgct attttactga aatcaccgtc agccatcgga tggaggttgt
    32221 gaaagagcag attgatttgc tggcgcaaaa agccgacttc tttatagagc acggcctgct
    32281 ggcatcggtc aatattgatg gccctacgct catcgccctg cgtcagcaac caaaaatcct
    32341 gcgccaaatt gagcgtcttc cctggctgcg tttcgaactg gtggagcata tccgtctgcc
    32401 gaaagattca acctttgcct cgatgtgtga atttggcccg ctgtggctgg gtgattttgg
    32461 taccgggatg gcaaatttct ctgcactaag tgaagtgcgt tatgactaca tcaaaatcgc
    32521 gcgagaactg tttgtgatgc tgcgtcagtc gccggaagga cgcacactct tttctcagct
    32581 tttacatcta atgaatcgct attgtcgcgg ggtgattgtt gagggcgtag aaacgccgga
    32641 agagtggcgt gatgtacaga actcgcccgc attcgccgca caaggctggt ttctttcacg
    32701 cccggcaccg atagaaacgc tgaatacggc ggttctggcg ctataagctg cctcattttc
    32761 cgcctggctg gactatcttt aggactggca caggaagaat atgaggaagc gaacgatgag
    32821 caaggcaggc aaaataactg ctgcgatttc aggggctttc ttgttgttga ttgtcgtggc
    32881 gatcattttg attgcaactt ttgactggaa tcgactcaaa ccgaccatca accagaaagt
    32941 ctctgcggag ttgaatcgtc cgttcgctat ccgtggcgat ctgggcgtgg tgtgggagcg
    33001 gcaaaaacaa gaaactggct ggcgcagctg ggtgccgtgg cctcatgtac atgcagaaga
    33061 catcattctt ggcaatccac cggatattcc cgaagtcacg atggtgcatt tgccgcgagt
    33121 agaggcaacg ctggcaccgc tggcgctgct gaccaaaacg gtctggctgc cgtggatcaa
    33181 gctcgaaaag cccgacgcgc gcctgattcg cctctccgaa aagaacaata actggacgtt
    33241 taatctcgcc aacgatgata acaaagacgc gaatgcaaag ccgtcggcat ggtcgtttcg
    33301 gctggataat attcttttcg atcaagggcg gatcgccatt gatgacaaag taagcaaagc
    33361 ggatctggaa atttttgttg atccgttagg caagccgctg ccgttcagcg aagttactgg
    33421 atcgaaaggt aaagcggata aagaaaaggt gggcgattac gtttttggcc tgaaggcgca
    33481 gggacgttat aacggtgaac cgctcacggg tacgggaaaa ataggcggta tgctggcgct
    33541 gcgtggcgaa gggacgccgt ttccggtaca ggctgatttc cgttcaggta atacccgtgt
    33601 tgcttttgat ggcgtcgtga atgacccaat gaagatgggc ggtgtcgatt tacggcttaa
    33661 attttctggc gattcactgg gtgatctcta tgaactgacg ggcgttctgc tgcccgatac
    33721 cccgccgttt gaaacggatg gtcggctggt agcgaaaatc gacactgaaa aatcgtcggt
    33781 ctttgattat cgcggtttta atgggcgaat tggcgatagc gatatccacg gttctctggt
    33841 ctacaccacc ggaaagccgc gaccaaaact ggaaggtgat gtcgagtcgc ggcaattgcg
    33901 gctggcggac ctgggaccgt tgattggcgt tgattcgggg aaaggggcag aaaagtcgaa
    33961 acggtctgaa cagaagaagg gcgaaaaaag cgttcagcct gcgggcaaag tgctgcctta
    34021 tgaccgcttc gaaaccgata aatgggacgt tatggatgcc gatgttcgct tcaaaggccg
    34081 acgtatcgag catggcagta gcctgccgat tagcgatctt tctactcata tcatcctcaa
    34141 aaatgctgac ctgcgcctgc aaccgctgaa atttggcatg gcgggcggca gcattgcggc
    34201 gaatatccat ctggaaggcg ataaaaagcc gatgcagggg cgggcagata ttcaggctcg
    34261 tcgactgaaa ctgaaagaac tgatgcccga tgtggaactg atgcagaaga cgctggggga
    34321 aatgaacggt gacgcggaac tacgcggtag cggtaactcg gtggcggcgc ttttaggcaa
    34381 cagtaacggc aacctgaaac tgttgatgaa tgacgggctg gtgagccgca acctgatgga
    34441 gattgttggg ctgaatgtcg gcaactacat tgtcggtgcg atatttggtg acgatgaggt
    34501 gcgggtgaac tgcgcggcgg cgaatctgaa tattgccaac ggcgtagcgc gcccgcagat
    34561 ttttgctttc gatactgaga acgcgttgat taatgttacc ggcacggcaa gttttgcttc
    34621 ggaacagctg gatttgacta ttgatccgga gagtaaaggg attcggatta tcacactgcg
    34681 ttcgccgctg tatgtgcgtg ggacgtttaa aaatccgcag gctggggtga aagccggacc
    34741 gctgattgcc cgtggtgccg ttgcggcggc actggcaacg ctggtaacac cggcggcggc
    34801 gttattggca ctgatctcac cttccgaagg ggaggctaat cagtgtcgga cgatattgtc
    34861 gcagatgaag aagtgatgag gttggattgt gtttgctggt gagttcggga gcagcgtgtt
    34921 cccctcaccc taatcctctc cccaaagggg cgaggagact gttttgtgcg tgttgaaaca
    34981 acgagtaccg cttttccgtt cactttctgg gggagggctg ttatgttcgc gatataacat
    35041 ctcgctccgc ttttctccct ctccctttca gggagagggc tggggtgagg gtggctgccc
    35101 acacgatact tacaacgact gatgttgcgt ctcatgggtc agcagcaggg cgattaacgt
    35161 caagccagcc atcgccgcca gatataaccc caccgcacct aacccgtagt tagtctgcaa
    35221 ccaggctgcg atatacggcg caacggaagc cccgagaatc gacgatacgt tgtaagagaa
    35281 cgatgctccg gtgtaacgca cttctgtcgg gaacagctct ggtaacagcg cgcccatcgg
    35341 accgaaggtc agccccatca gacttaaccc cagcagcagg aaggcaaaaa ccagaatcgg
    35401 gttgccagaa ccgagcaaag ggttaaaggc gaatagcgcg aacaggatga gcagcgtggt
    35461 gatgattacc atgcttttac ggcgaccaaa ggcatcagcc agtaatccag cgactggcac
    35521 catcacgcca aaaccaataa ctgccatcat caacatccac aacacttcgt tacgcggcag
    35581 gccaagccca actggcgcgg cggcggtact aaaggtcatg gagtagaccg tcatgatgta
    35641 aaacagcgta taggttgcca gcataatgaa cgtacccagt acggttacgc gaacatgttt
    35701 ggtcagcagc gtacccagcg ggatcttcac ctgttttttc gctttagcga ctttctcaaa
    35761 caccggcgac tcatgcagcg acacgcgaac atacaggccg ataatgacca gcaccgccga
    35821 gaagataaat ggcacacgcc agccccagct cataaactgc tcgtcggtca gtagccagga
    35881 aagcagcaag aaagtgccgt tggcaaagaa gaagccaatc ggtgcgccca gctgcgggaa
    35941 ggagccgtac aatgcacgtt tgcgcggtgg ggcgttttca gtcgccagca gcgccgcgcc
    36001 gccccattca ccacctaagc ccagaccctg accaaatcga gccagcgcca gcagcagcgg
    36061 ggcgaaaata ccaatcgtgg catagcctgg cagcagacca atcaccacgg tcgaaatccc
    36121 catcgttagc aacgaggcga ccagcgtcgc tttacgccca acgcgatcgc caaaatgacc
    36181 aaaaacggca gagccaatag ggcgcgcgac gaaggcgatg gcgaaggtgg cgagcgactg
    36241 tagcgttgct gccgtaggat cgccctgcgg gaagaagata tgcggaaaca caataacggc
    36301 cgcagtggcg taaatgtaaa agtcgaagaa ctcaatggct gtgccaatga gagaggcgac
    36361 aaggacttta ttacgcgagt tgatcggcgt gtattcttgc tcgtggtcga gtgttgtggc
    36421 tgttgcttgc ataatctttt cttatttttt ggctaacgaa tagccatatt acgcacagca
    36481 aaagcgatat ttcaatgtgt aacaaatcgc ggaaatggtc aaaaaccagg caaaaagggg
    36541 ataatgttta ggccagtgat ttttcttcta tgaaatgctt cacataattt tataaatagt
    36601 ggataaaact ggtttcaggt taaataaaag ttaccaactg gatttatatg ctggggttat
    36661 gagttagaat gaaattgttt gctcccaaat agatggctga agaggctctg gggacgagtt
    36721 tcaagaggtt atgtgcgcat tatagccgga tgcgatgctg gcgcatctta tccggcctac
    36781 ggggagccag gccgaataaa atcgtatgcc ggataaggcg tttacgccgc atccggccta
    36841 ttttaaggct gcgttttccc tggcattcgc gggtcgtctt tatattcggc ggtggcaatc
    36901 cacgccgcgc aaaacagcgt caaacgggcg aagaagtaga aaaatgccat cagccccagc
    36961 acggaaccaa atgctgcgcc agagggggat ttcatcagcg atggcagggt gtaggtcatc
    37021 acgattttaa tcacttcaaa accaatagca gccagaaatg ttccgcgaat cagggctttt
    37081 ttgcgcggac ggtggcgcgg caaccgccag aagatccaga agaaaagcag atagttggcg
    37141 aagatggaaa tcgccaggcc aatcaatcgc cacgtcggtt tcagccactc aatgctgttc
    37201 aggtgcaggg cgctaataat catttgctgc gccgaaccgg caaccgaggt gatcgaaagc
    37261 gtcacaatca gcgcaatcaa caaaccaatc agtgaaataa aatcacgcag atattttacc
    37321 cagaacttct cctgatcttg cggcgagcgt tcccagacat cacgcgactg ggcacgaatc
    37381 gcttcacgca ggttacccat ccagttgatg ccggaataaa gtgccaccgc caggccgaca
    37441 agccctacag tcgtacgctg ctgaacggcg gtgttgatgg tgtttttcaa cgtggcggct
    37501 agtgtcggat cgctgatgtt ttgcagaatt ttgtcgaaga tatcctgtag caacatcgga
    37561 tgggaggcca gcacaaagcc ccctgcggca aacgacacca tcaaaatcgg gatcatcgac
    37621 aaaaatgaga aataggtgat agccgcacca aactggttac ccagccgatc gttaaagcgt
    37681 tctgtcgcgc gaatcaggtg cgcaataacc ggttggcgtt ggactttttc ggcagtggtg
    37741 gtgacggttt ccagcgcctg gctaactttg ccgcctttct cgctattatc caactgctta
    37801 atcggctcgt gctccagatc ctgggtggga cgtttgatct cgttttcctg cgtcatccgc
    37861 tcttttgtcc ttctgtcgtg gtcattctta aaaagtatag tcggtcagtc caggtgctct
    37921 ttcattacgc cagccagcca ctgcataaac aggtttacac gccgggaaag ctcccgacgc
    37981 tgcgggtaaa ccagcgaaag ggagagcggc tcggcacggt agccaggtaa tacttcaata
    38041 agccgcccgg cacgcagggc ttcgcgcacg gcaatgcgcg ggatctgaat aatccccaga
    38101 ccggcaagac cggcggcgag atagttttcg ctactattta ccgtcaacat gccgccagac
    38161 ttaaaccact ggacgccatt aacgctggca acctcaaaac ctaacggatg tacacccagg
    38221 tgcggtgtat aacgcactat tgcgtgtgaa gtcagatcat cggggctttg cggataacca
    38281 aagcgcgtca gatagtgcgg actggcacag ttgaccatgg tcagtttgcc gaggggacgg
    38341 gcgataacgc catcttccgg taacgcgcca gtgcgtatca cgcaatcaaa accatcatga
    38401 agaatatcta ccggacggtc atggctactc agttccagct caattcccgg atgcagatag
    38461 agaaattccg acaggcgcgg cagtaacagg tttttcgcga ttcctggcgg gatgtcgatg
    38521 cgtaatttac cgctgatact ggtggcatcc tgttgaaaca gaccgtccag ttcgttgaga
    38581 ttactcaaca catcttttgc ccgttgataa taggtcatgc cttctggcgt gagtttgacc
    38641 cgtcgcgtgg tgcgctggag aagctgggtg ccaagttgat gttccagtgc ctgtatctgg
    38701 cgcgaaacac ttccctttgg caaagcaaag aaatccgctg cgcgggaaaa actttccagc
    38761 tccgcgactt tgatgaacaa ctgcattgcg tgaattttat ccatttcttt gaccgattgt
    38821 tgttcacagc gaaacagtaa cgcgcatatc gcattgttta ttgttttttc taacatctaa
    38881 tgccgggttt cacaatgttg tcatgacgaa tgtggcgatt tctcagcagg aaaagggcgg
    38941 aatagcttta tgagaaaggt gaatcccctt aaacagagcg tatttttcag tgattccctt
    39001 taaagtgaat agaggacgta ttggctattt gtgcttattt ttgtctcatt gccatttgtt
    39061 attttggctt gtagtcgcgg aatttcattt ttaattgcat gcgtactaac caccaatata
    39121 aggaaatcct caaaattgtt ttaaatagtg ccctcgacat gtaatttcag gcgtttagct
    39181 gtaactattt atatcggtaa ctattttcta cgcgtcatct ctgtagaatg gccaccgcca
    39241 aatggcgaat tcttattttt tctcgcgggt aatacccttc cactacttaa gtctttttaa
    39301 catattcagg tggagattca gttatgcaaa tagtcatgtt tgacaggcag tcaatattta
    39361 ttcatggaat gaaaatcagt ttacagcagc gtattccagg ggtgagtatt cagggggcca
    39421 gtcaggcaga cgagttatgg caaaagctgg aaagttaccc tgaagcctta gttatgctcg
    39481 atggcgatca ggatggtgag ttttgctact ggttgctgca aaaaaccgtg gtgcagtttc
    39541 ctgaggttaa ggtgttaatc acggcgacgg attgcaataa acggtggtta caggaagtta
    39601 tccattttaa tgtgctggcc attgtgcctc gtgattcaac cgtcgagaca tttgcgttgg
    39661 cggtaaatag tgcggcgatg gggatgatgt ttctgcctgg agactggcgg acgacgccgg
    39721 aaaaggacat taaagatctc aaatcgttaa gcgcccgcca gcgggagatt ttaaccatgt
    39781 tagcggcggg cgagtcaaat aaggagatcg gcagagcgct gaatatcagt accggaacgg
    39841 taaaagcgca tctggaatcc ctgtatcgcc gtctggaagt gaaaaatcgc acccaggcgg
    39901 caatgatgtt aaatatctcc tcctgaagag gataatttta cagccagcag gaagttagcg
    39961 gctggctgta aaaatattat ggttcgccgt acaaaccaat taaacggcgt accacaccgt
    40021 tagtccagcc aaacccatcc tgcaacggat actcgccacc gccgccttcg cgtggaacac
    40081 catcggcaat atggtatttt tcgatcagtt tgtgctgttc cagatagaac tgattcaccg
    40141 tcttcagcca gcttcgcgcg atttcatcac ccagaaggtc atcgccgtac attttaaatc
    40201 cctgaatcgc catccattgt aacggtgccc agccgttggg tttatcccac tgttcaccgg
    40261 tttcgtactc gcttgccaga atcccgccag gtgtcagtaa ccgactgcgc acggcatttg
    40321 ccagacgatc ggcctgttca tggttcgcca taccgacata gagtggcaca atggcggcag
    40381 cggaaaacag cgccagttgt tcgcgtcgcc agtcgtaatc gcggtagatg ccgttttcat
    40441 catcccagag gtaacgcttt accgcatcgc gacgggcact ggccttctgg cggaacagtg
    40501 cttctgtctc tttctcgcct ttcagcgccg agatgttggc gatggcgctc tccagtttaa
    40561 acaggaaggc attcagatcg atggggatga actgggtggt acgaatactc gccagacgac
    40621 cagtatcacg cagccaacgg gaagagtaat cccaaccgga ggccgccccc gctcgtaaat
    40681 cgcggtacac ctcgttgggc gggcgaccag aatgtttcgc ggtttcaacg tcctcaagcc
    40741 aggattcgtc acgcggcgtg tcgcgatcgt cccagtaacg gttgagcagc gatccgtccg
    40801 gcatccgcac aacatggcga taggcctgat tagggatcaa cgattctgca ccgtccatcc
    40861 agaaggcata ttccattttc aggtggtcga gatagcggcg cgcaccgcgt acaccatctt
    40921 cttcaaacaa ctccaccatc agcgcaaaaa ccggtggttg cgagcggctc aaataatagg
    40981 tgcggttgcc gttggggatg tgaccgtagt tttcgatcat ccaggcgaag ttatcggcca
    41041 tgcatttcag caaatcttcc cgaccacttt ccgccagccc cagcatggtg aaataggaat
    41101 cccaatagta ggtttcgcta aaacggccgc ccgggacaat atatgactgc ggtagcgcca
    41161 gcagagaaga ccacggaatg tgatcctgtg gttcgcgggt tagcaccggc cacagctggt
    41221 cgatatgctc tttcagggaa ttttgcgggt ccgatacata ctcgctggag tagacctccg
    41281 gcagccagaa gtgattttca acaaacttgc gcaagtcaaa atcacgatga cggcgcactt
    41341 tacggtagcg gattaaaata tccagcgggt ccattttggg tgcgcagtcg ggaaaggttt
    41401 tactgtcggg gaaaattttc gccgactgaa catgctcgaa cagttcgaga tagcgatcgg
    41461 caggcgtcag cgcatcagag gcgggcagcc cttcaatcat ctcgggttcc ggttctgcct
    41521 cgatcatctc atccagtttt aattcatacg ggtccagttc atagcagaga tcgacttcga
    41581 tcatcagttc gtctggatta gggttttgaa ttttctgatt gagcataagg atccaacctc
    41641 cgaaattcgt cgctaattat cggcttttct ttaagggtag tcattcgctc cgcctggtgg
    41701 gcgacaaagc gtgcggtgga tcacgtttat taacttgtca aaaaatataa cgcactaata
    41761 tcaatggaat ttataaaaat acggatttgg tgttgttttt cattttcaaa acattcaatc
    41821 ctgctctcgc cgcaatcatg atatgccatt cctgatctgg gtaataggca caggctatct
    41881 tattgatagt ttatattcat gtaattgatt gattcctatc aaaaagcgta tctccctgtt
    41941 ttttatgatg gctttgtctc gcagagacgt ttgcagcatt ctggaaaatt ttctgggtca
    42001 caataactca ccaccgtgag ggaagaataa tgaaaatggt ctcacgtatt accgcgatcg
    42061 gcctggctgg cgtcgcgatt tgctatttag ggttatctgg ttatgtgtgg taccacgata
    42121 ataaacgcag taaacaggcc gatgttcagg catctgctgt cagtgaaaat aataaggttt
    42181 taggctttct ccgcgaaaaa ggatgcgact attgccacac gccttcggca gaattacccg
    42241 cctattatta tattcctggc gcgaaacagt tgatggatta cgacattaag cttggatata
    42301 aatcttttaa cctcgaggcc gtgcgtgcgg cactgctggc tgataaaccc gtttcgcaaa
    42361 gcgatctgaa taagattgaa tgggtgatgc agtatgaaac tatgccacca acgcgttata
    42421 ccgcgctaca ctgggcgggt aaggtgagtg atgaagagcg ggcggaaata ctggcctgga
    42481 ttgcaaaaca gcgcgcggaa tattacgcca gcaatgatac tgctccggag catcgcaatg
    42541 aaccggtgca gcccatcccg caaaaactgc ctaccgatgc gcaaaaagtg gcgttgggct
    42601 ttgcgctgta tcacgatccc cgtttatcgg ctgatagcac catttcatgc gctcattgcc
    42661 atgcgttgaa tgcggggggc gtcgatggca gaaaaacatc gattggtgtt ggtggcgcag
    42721 ttgggccgat taacgcgccg acggtattta actcagtatt taacgttgag cagttctggg
    42781 atggtcgtgc ggcaacattg caggatcagg caggtggacc gccgttgaac ccgattgaaa
    42841 tggcgtcgaa atcctgggac gaaattattg ctaagctgga aaaagatccg cagcttaaag
    42901 cgcagttcct cgaagtttat ccgcaaggtt tcagtggcga aaatattact gatgccattg
    42961 ctgaatttga gaaaacatta attacgccgg attccccatt tgataaatgg ttgcgtggag
    43021 atgaaaatgc gctgacggcg caacagaaaa aaggctatca attatttaaa gataataaat
    43081 gtgcaacttg tcatggtggt attattctcg gcggacgttc ctttgaaccg ttggggctga
    43141 aaaaagactt taactttggg gaaattacgg cggcggatat tggtcgtatg aatgtgacta
    43201 aagaagagcg tgataaattg cgccagaaag tacccggttt acgtaacgtt gctttaacgg
    43261 caccgtactt ccatcgcggt gacgtgccga cgctggacgg ggcggtgaaa ctgatgctgc
    43321 gctatcaggt aggcaaagag ctgccgcagg aggatgtgga tgatatcgta gctttcctgc
    43381 acagtctgaa cggggtgtac acgccgtata tgcaggataa acaataacta atttgatcgc
    43441 ccgaacagga atgtttgggc gatttttatt acgataataa agtctgtttt taatattatc
    43501 atgttaaatg tttatattat aaaaagtcgt ttttctgctt aggattttgt tatttaaatt
    43561 aagcctgtaa tgccttgctt ccattgcgga taaatcctac ttttttattg ccttcaaata
    43621 aatttaagga gttcgaaatg gaccagaagc tgttaacgga tttccgctca gaactactcg
    43681 attcacgttt tggcgcaaag gccatttcta ctatcgcgga gtcaaaacga tttccgctgc
    43741 acgaaatgcg cgatgatgtc gcatttcaga ttatcaatga tgaattatat cttgatggca
    43801 acgctcgtca gaacctggcc actttctgcc agacctggga cgacgaaaac gtccataaat
    43861 tgatggattt gtcgatcaa
//
LOCUS       DADMJE010000009        43379 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.009, whole genome shotgun sequence.
ACCESSION   DADMJE010000009 DADMJE010000000
VERSION     DADMJE010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 43379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 43379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..43379
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.009"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            164..421
                     /locus_tag="JN001_000499"
                     /pseudo
     CDS             164..421
                     /locus_tag="JN001_000499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708736.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            complement(471..1727)
                     /locus_tag="JN001_000500"
     CDS             complement(471..1727)
                     /locus_tag="JN001_000500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease"
                     /protein_id="HAY9051834.1"
                     /translation="MNLKLQLKILSFLQFCLWGSWLTTLGSYMFVTLKFDGASIGAVY
                     SSLGIAAVFMPALLGIVADKWLSAKWVYAICHTIGAITLFMAAQVTTPEAMFLVILIN
                     SFAYMPTLGLINTISYYRLQNAGMDIVTDFPPIRIWGTIGFIMAMWVVSLSGFELSHM
                     QLYIGAALSAILVLFTLTLPHIPVAKQQANQSWTTLLGLDAFALFKNKRMAIFFIFSM
                     LLGAELQITNMFGNTFLHSFDKDPMFASSFIVQHASIIMSISQISETLFILTIPFFLS
                     RYGIKNVMMISIVAWILRFALFAYGDPTPFGTVLLVLSMIVYGCAFDFFNISGSVFVE
                     KEVSPAIRASAQGMFLMMTNGFGCILGGIVSGKVVEMYTQNGITDWQTVWLIFAGYSV
                     VLAFAFMAMFKYKHVRVPTGTQTVSH"
     gene            complement(1929..3008)
                     /gene="mltC"
                     /locus_tag="JN001_000501"
     CDS             complement(1929..3008)
                     /gene="mltC"
                     /locus_tag="JN001_000501"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417438.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltC"
                     /protein_id="HAY9051835.1"
                     /translation="MKKYLALALIAPLLISCSTTKKGDTYNEAWVKDTNGFDILMGQF
                     AHNIENIWGFKEVVIAGPKDYVKYTDQYQTRSHINFDDGTITIETIAGTEPAAHLRRA
                     IIKTLLMGDDPSSVDLYSDVDDITISKEPFLYGQVVDNTGQPIRWEGRASNFADYLLK
                     NRLQSRSNGLRIIYSVTINMVPNHLDKRAHKYLGMVRQASRKYGVDESLILAIMQTES
                     SFNPYAVSRSDALGLMQVVQHTAGKDVFRSQGKSGTPSRSFLFDPASNIDTGTAYLAM
                     LNNVYLGGIDNPTSRRYAVITAYNGGAGSVLRVFSNDKIQAANIINTMTPGDVYQTLT
                     TRHPSAESRRYLYKVNTAQKSYRRR"
     gene            complement(3073..3348)
                     /locus_tag="JN001_000502"
     CDS             complement(3073..3348)
                     /locus_tag="JN001_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative damage protection protein"
                     /protein_id="HAY9051836.1"
                     /translation="MSRTIFCTFLQREAEGQDFQLYPGELGKRIYNEISKEAWAQWQH
                     KQTMLINEKKLNMMNAEHRKLLEQEMVNFLFEGKEVHIEGYTPEDKK"
     gene            complement(3376..4428)
                     /gene="mutY"
                     /locus_tag="JN001_000503"
     CDS             complement(3376..4428)
                     /gene="mutY"
                     /locus_tag="JN001_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HAY9051837.1"
                     /translation="MQASQFSAQVLDWYDKYGRKTLPWQIDKTPYKVWLSEVMLQQTQ
                     VATVIPYFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLHGG
                     KFPETFEEVAALPGVGRSTAGAILSLSLGKHFPILDGNVKRVLARCYAVSGWPGKKEV
                     ENKLWSLSEQVTPAVGVERFNQAMMDLGAMICTRSKPKCSLCPLQNGCIAAANNSWSL
                     YPGKKPKQTLPERTGYFLLLQHEDEVLLAQRPPSGLWGGLYCFPQFADEESLRQWLAQ
                     RQIAADNLTQLTAFRHTFSHFHLDIVPMWLPVSSFTGCMDEGNALWYNLAQPPSVGLA
                     APVERLLQQLRTGAPV"
     gene            4589..5308
                     /gene="trmB"
                     /locus_tag="JN001_000504"
     CDS             4589..5308
                     /gene="trmB"
                     /locus_tag="JN001_000504"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HAY9051838.1"
                     /translation="MKNDVISPEFDENGRPLRRIRSFVRRQGRLTKGQEHALENYWPV
                     MGVEFSEDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGA
                     CLASAHEEGLNNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVP
                     FAELVKSKLQLGGVFHMATDWEPYAEHMLEVMSSIDGYKNLSESNDYVPRPASRPVTK
                     FEQRGHRLGHGVWDLMFERVK"
     gene            5308..5634
                     /locus_tag="JN001_000505"
     CDS             5308..5634
                     /locus_tag="JN001_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF469 domain-containing protein"
                     /protein_id="HAY9051839.1"
                     /translation="MAKNRSRRLRKKMHIDEFQELGFSVAWRFPEGTSEEQIDKTVDD
                     FINEVIEPNKLAFDGSGYLAWEGLICMQEIGKCTEEHQAIVRKWLEERKLDEVRTSEL
                     FDVWWD"
     gene            5818..6537
                     /locus_tag="JN001_000506"
     CDS             5818..6537
                     /locus_tag="JN001_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2884 domain-containing protein"
                     /protein_id="HAY9051840.1"
                     /translation="MMRKMLLAAALSVTAMTAHADYQCSVTPRDDVIVSPQTVQVKGE
                     NGNLVITPDGNVMYNGKQYSLNAAQREQAKDYQAELRSTLPWIDEGAKSRVEKARIAL
                     DKIIVQEMGESSKMRSRLTKLDAQLKEQMNRIIETRSDGLTFHYKAIDQVRAEGQQLV
                     NQAMGGILQDSINEMGAKAVLKSGGNPLQNVLGSLGGLQSSIQTEWKKQEKDFQQFGK
                     DVCSRVVTLEDSRKALVGNLK"
     gene            6713..7759
                     /gene="ansB"
                     /locus_tag="JN001_000507"
     CDS             6713..7759
                     /gene="ansB"
                     /locus_tag="JN001_000507"
                     /EC_number="3.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparaginase 2"
                     /protein_id="HAY9051841.1"
                     /translation="MEFFKKTALAALVMGFSGAALALPNITILATGGTIAGGGDSATK
                     SNYTAGKVGVENLVNAVPQLKDIANVKGEQVVNIGSQDMNDNVWLTLAKKINTDCDKT
                     DGFVITHGTDTMEETAYFLDLTVKCDKPVVMVGAMRPSTSMSADGPFNLYNAVVTAAD
                     KASANRGVLVVMNDTVLDGRDVTKTNTTDVATFKSVNYGPLGYIHNGKIDYQRTPARK
                     HTSDTPFDVSKLNELPKVGIVYNYANASDLPAKALVDAGYDGIVSAGVGNGNLYKSVF
                     DTLATAAKNGTAVVRSSRVPTGATTQDAEVDDAKYGFVASGTLNPQKARVLLQLALTQ
                     TKDPQQIQQIFNQY"
     gene            7876..8883
                     /locus_tag="JN001_000508"
     CDS             7876..8883
                     /locus_tag="JN001_000508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1202 family protein"
                     /protein_id="HAY9051842.1"
                     /translation="MKKQWIVGTALLMLMTGNAWADGEPPTENILKDQFKKQYHGILK
                     LDAITLKNLDAKGNQATWSAEGDVSSSDDLYTWVGQLADYELLEQTWTKDKPVKFSAM
                     LTSKGTPASGWSVNFYSFQSAASDRGRVVDDIKTNNKYLIVNSEDFNYRFSQLESALN
                     TQKNSIPALEKEVKALDKQMVAAQKAADAYWGKDANGKQMTREEAFKKIHQQRDEFNK
                     QNDSEAFAVKYDKEVYQPAIAACHKQSEECYEVPIQQKRDFDINEQRRQTFLQSQKLS
                     RKLQDDWVTLEKGQYPLTMKVSEINSKKVAILMKIDDINQANERWKKDTEQLRRNGVI
                     K"
     gene            complement(9038..10174)
                     /gene="hemW"
                     /locus_tag="JN001_000509"
     CDS             complement(9038..10174)
                     /gene="hemW"
                     /locus_tag="JN001_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HAY9051843.1"
                     /translation="MVKLPPLSLYIHIPWCVQKCPYCDFNSHALKGEVPHDDYVQHLL
                     CDLDNDVAYAQGREVKTIFIGGGTPSLLSGPAMQTLLDGVRARLPLAADAEITMEANP
                     GTVEADRFVDYQRAGVNRISIGVQSFSEEKLKRLGRIHGPQEAKRAAKLASGLGLRSF
                     NLDLMHGLPDQSLEEALGDLRQAIELNPPHLSWYQLTIEPNTLFGSRPPVLPDDDALW
                     DIFEQGHQLLTAAGYQQYETSAYAKPGYQCQHNLNYWRFGDYIGIGCGAHGKVTFPDG
                     RILRTTKTRHPRGFMQGRYLESQRDVEAADKPFEFFMNRFRLLEAAPRAEFSAYTGLC
                     EDVIRPQLDEAIAQGYLTECADYWQITEHGKLFLNSLLELFLAE"
     gene            complement(10167..10760)
                     /locus_tag="JN001_000510"
     CDS             complement(10167..10760)
                     /locus_tag="JN001_000510"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HAY9051844.1"
                     /translation="MQKVVLATGNAGKVRELASLLSDFGLDIVAQTDLGVDSAEETGL
                     TFIENAILKARHAAKVTGLPAIADDSGLAVDALGGAPGIYSARYSGEDATDQKNLQKL
                     LETLKDVPDDQRQARFHCVLVYLRHAEDPTPLVCHGSWPGVITREPAGTGGFGYDPIF
                     FVPSEGKTAAELTREEKSAISHRGQALKLLLDALRNG"
     gene            complement(10768..11058)
                     /locus_tag="JN001_000511"
     CDS             complement(10768..11058)
                     /locus_tag="JN001_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417428.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggU family protein"
                     /protein_id="HAY9051845.1"
                     /translation="MNAVTVNDDGLVLRLYIQPKASRDSIVGLHGDEVKVAITAPPVD
                     GQANSHLVKFLGKQFRVAKSQVVIEKGELGRHKQIKIINPQQIPPEIAALIN"
     gene            complement(11055..11621)
                     /gene="yggT"
                     /locus_tag="JN001_000512"
     CDS             complement(11055..11621)
                     /gene="yggT"
                     /locus_tag="JN001_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotic shock tolerance protein YggT"
                     /protein_id="HAY9051846.1"
                     /translation="MNTLTFLLSTVIELYTMVLLLRIWMQWAHCDFYNPFSQFVVKVT
                     QPIIGPLRRVIPAMGPIDSASLLVAYILSFIKAIVLFKVVTFLPIIWIAGLLILLKTI
                     GLLIFWVLLVMAIMSWVSQGRSPIEYVLIQLADPLLRPIRRLLPAMGGIDFSPMILVL
                     LLYVINMGVAEVLQATGNILLPGMWMAL"
     gene            complement(11639..12343)
                     /gene="yggS"
                     /locus_tag="JN001_000513"
     CDS             complement(11639..12343)
                     /gene="yggS"
                     /locus_tag="JN001_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate homeostasis protein"
                     /protein_id="HAY9051847.1"
                     /translation="MNDIAHNLAQVRDKISAAATRCGRSPEEITLLAVSKTKPASAIA
                     EAIDAGQRQFGENYVQEGVDKIRHFQELGVTGLEWHFIGPLQSNKSRLVAEHFDWCHT
                     IDRLRIATRLNDQRPAELPPLNVLIQINISDENSKSGIQLAELDELAAAVAELPRLRL
                     RGLMAIPAPESEYVRQFEVARQMAVAFAGLKTRYPHIDTLSLGMSDDMEAAIAAGSTM
                     VRIGTAIFGARDYSKK"
     gene            12361..13341
                     /locus_tag="JN001_000514"
     CDS             12361..13341
                     /locus_tag="JN001_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417425.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV pilus twitching motility protein PilT"
                     /protein_id="HAY9051848.1"
                     /translation="MNMEEIVALSVKHNVSDLHLCSAWPARWRIRGLMEAAPFDALDV
                     EELLREWLDDDQRAILLENGQLDFAVSLAENQRLRGSAFAQRHGISLALRLLPSHCPQ
                     LEQLGAPTVLPELLKSENGLILVTGATGSGKSTTLAAMVGYLNQHADAHILTLEDPVE
                     YIYASQRCLIQQREIGLHCMTFASGLRAALREDPDVILLGELRDSETIRLALTAAETG
                     HLVLATLHTRGAAQAVERLVDSFPAQEKDPVRNQLAGSLRAVLSQKLEVDKQEGRVAL
                     FELLINTPAVGNLIREGKTHQLPHVIQTGQQVGMITFQQSYQQRVGEGRL"
     gene            complement(13517..13933)
                     /gene="ruvX"
                     /locus_tag="JN001_000515"
     CDS             complement(13517..13933)
                     /gene="ruvX"
                     /locus_tag="JN001_000515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HAY9051849.1"
                     /translation="MSGTLLAFDFGTKSIGVAVGQRITGTARPLPAIKAQDGTPDWNL
                     IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVE
                     ARSGLFEQGGYRALNKGKVDSASAVIILESYFEQGY"
     gene            complement(13933..14568)
                     /locus_tag="JN001_000516"
     CDS             complement(13933..14568)
                     /locus_tag="JN001_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708713.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HAY9051850.1"
                     /translation="MTAPFFPRILGAVAFLNQETEPLTMNLQHHFLIAMPALQDPIFR
                     RSVVYICEHNTNGAMGIIVNKPLENLKIEGILEKLKITPEPRDESIRLDKPVMLGGPL
                     AEDRGFILHTPPSNFASSIRISDNTVMTTSRDVLETLGTDKQPSDVLVALGYASWEKG
                     QLEQEILDNAWLTASADLNILFKTPIADRWREAAKLIGVDILTMPGVAGHA"
     gene            complement(14605..15555)
                     /gene="gshB"
                     /locus_tag="JN001_000517"
     CDS             complement(14605..15555)
                     /gene="gshB"
                     /locus_tag="JN001_000517"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HAY9051851.1"
                     /translation="MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLY
                     LINGEARAHTRTLNVKQNYEEWFSFVGEQDLPLADLDVLLMRKDPPFDTEFIYATYIL
                     ERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHSDIILK
                     PLDGMGGASIFRVKEGDPNLGVIAETLTEHGTRYCMAQNYLPAIKDGDKRVLVVDGEP
                     VPYCLARIPQGGETRGNLAAGGRGEPRPLTESDWKIARQIGPTLKEKGLIFVGLDIIG
                     DRLTEINVTSPTCIREIEAEFPVSITGMLMDAIEARLQQQ"
     gene            complement(15568..16299)
                     /gene="rsmE"
                     /locus_tag="JN001_000518"
     CDS             complement(15568..16299)
                     /gene="rsmE"
                     /locus_tag="JN001_000518"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311849.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HAY9051852.1"
                     /translation="MRIPRIYHPEPLTSHSHIALCEDAANHIGRVLRMGPGQALQLFD
                     GSNQVFDAEITSASKKSVEVKVLEGKIDDRESPLHIHLGQVMSRGEKMEFTIQKSIEL
                     GVSLITPLFSERCGVKLDSERLNKKLQQWQKIAIAACEQCGRNRVPEIRPAMDLEAWC
                     AEQDEGLKLNLHPRASNSINTLPLPVERVRLLIGPEGGLSADEIAMTARYQFTDILLG
                     PRVLRTETTALTAITALQVRFGDLG"
     gene            complement(16379..17086)
                     /gene="endA"
                     /locus_tag="JN001_000519"
     CDS             complement(16379..17086)
                     /gene="endA"
                     /locus_tag="JN001_000519"
                     /EC_number="3.1.21.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease I"
                     /protein_id="HAY9051853.1"
                     /translation="MYRYLSIAAVVLSAAFSGPALAEGINSFSQAKAAAVKVHADAPG
                     TFYCGCKINWQGKKGVVDLQSCGYQVRKNENRASRVEWEHVVPAWQFGHQRQCWQDGG
                     RKNCAKDPVYRKMESDMHNLQPSVGEVNGDRGNFMYSQWNGGEGQYGQCAMKVDFKEK
                     AAEPPARARGAIARTYFYMRDQYNLTLSRQQTQLFNAWNKMYPVTDWECERDERIAKV
                     QGNHNPYVQRACQARKS"
     gene            complement(17181..17678)
                     /locus_tag="JN001_000520"
     CDS             complement(17181..17678)
                     /locus_tag="JN001_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HAY9051854.1"
                     /translation="MKTSRLPIAIQQAVMRRLREKLAQANLKLGRNYPEPKLSYTQRG
                     TSAGTAWLESYEIRLNPVLLLENSEAFIEEVVPHELAHLLVWKHFGRVAPHGKEWKWM
                     MENVLGVPARRTHQFELQSVRRNTFPYRCKCQEHQLTVRRHNRVVRGEAVYRCVHCGE
                     QLVAK"
     gene            complement(17755..19149)
                     /locus_tag="JN001_000521"
     CDS             complement(17755..19149)
                     /locus_tag="JN001_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY9051855.1"
                     /translation="MPDAKKQGRSNKAMTFFVCFLAALAGLLFGLDIGVIAGALPFIA
                     DEFQITSHTQEWVVSSMMFGAAVGAVGSGWLSFKLGRKKSLMIGAILFVAGSLFSAAA
                     PNVEVLILSRVLLGLAVGVASYTAPLYLSEIAPEKIRGSMISMYQLMITIGILGAYLS
                     DTAFSYTGAWRWMLGVIIIPAILLLIGVFFLPDSPRWFAAKRRFVDAERVLLRLRDTS
                     AEAKRELDEIRESLQVKQSGWALFKENSNFRRAVFLGVLLQVMQQFTGMNVIMYYAPK
                     IFELAGYTNTTEQMWGTVIVGLTNVLATFIAIGLVDRWGRKPTLTLGFLVMAAGMGVL
                     GTMMHIGIHSPSAQYFAIAMLLMFIVGFAMSAGPLIWVLCSEIQPLKGRDFGITCSTA
                     TNWIANMIVGATFLTMLNTLGNANTFWVYAALNVLFILLTLWLVPETKHVSLEHIERN
                     LMKGRKLREIGAHD"
     gene            complement(19585..20739)
                     /gene="metK"
                     /locus_tag="JN001_000522"
     CDS             complement(19585..20739)
                     /gene="metK"
                     /locus_tag="JN001_000522"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HAY9051856.1"
                     /translation="MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACET
                     YVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVHSDMGFDANSCAVLSAIGKQSPD
                     INQGVDRADPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLPW
                     LRPDAKSQVTFQYDDGKIVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLT
                     SATTFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAA
                     YAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVETFGTEKVPSEQLTLLVREFF
                     DLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQLLRDAAGLK"
     gene            complement(21043..21258)
                     /locus_tag="JN001_000523"
     CDS             complement(21043..21258)
                     /locus_tag="JN001_000523"
                     /inference="COORDINATES: protein motif:HMM:NF037550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051857.1"
                     /translation="MGITSAGMQSRDAECGERIFTRTVRQVKQQTTVHYFVSPPRPPV
                     KTNPQAKTLISTRLEVATRKKRRVLFI"
     gene            21394..21525
                     /gene="yqgB"
                     /locus_tag="JN001_000524"
     CDS             21394..21525
                     /gene="yqgB"
                     /locus_tag="JN001_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417414.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response protein YqgB"
                     /protein_id="HAY9051858.1"
                     /translation="MKKKPVAQLERQHSLLENPCAYGLLSQFQAAIVVNCFTLNKII"
     gene            21534..23510
                     /gene="speA"
                     /locus_tag="JN001_000525"
     CDS             21534..23510
                     /gene="speA"
                     /locus_tag="JN001_000525"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic arginine decarboxylase"
                     /protein_id="HAY9051859.1"
                     /translation="MSDDMSMGLPSSAGEHGVLRSMQEVAMSSQEASKMLRTYNIAWW
                     GNNYYDVNELGHISVCPDPDVPEARVDLAQLVKTREAQGQRLPALFCFPQILQHRLRS
                     INAAFKRARESYGYNGDYFLVYPIKVNQHRRVIESLIHSGEPLGLEAGSKAELMAVLA
                     HAGMTRSVIVCNGYKDREYIRLALIGEKMGHKVYLVIEKMSEIAIVLDEAERLNVVPR
                     LGVRARLASQGSGKWQSSGGEKSKFGLAATQVLQLVETLREAGRLDSLQLLHFHLGSQ
                     MANIRDIATGVRESARFYVELHKLGVNIQCFDVGGGLGVDYEGTRSQSDCSVNYGLNE
                     YANNIIWAIGDACEENGLPHPTVITESGRAVTAHHTVLVSNIIGVERNEYTVPTAPAE
                     DAPRALQSMWETWQEMHEPGTRRSLREWLHDSQMDLHDIHIGYSSGTFSLQERAWAEQ
                     LYLSMCHEVQKQLDPQNRAHRPIIDELQERMADKMYVNFSLFQSMPDAWGIDQLFPVL
                     PLEGLAQVPERRAVLLDITCDSDGAIDHYIDGDGIATTMPMPEYDPENPPMLGFFMVG
                     AYQEILGNMHNLFGDTEAVDVFVFPDGSVEVELSDEGDTVADMLQYVQLDPKTLLTQF
                     RDQVKKTDLDAELQQQFLEEFEAGLYGYTYLEDE"
     gene            23647..24567
                     /gene="speB"
                     /locus_tag="JN001_000526"
     CDS             23647..24567
                     /gene="speB"
                     /locus_tag="JN001_000526"
                     /EC_number="3.5.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatinase"
                     /protein_id="HAY9051860.1"
                     /translation="MSTLGHQYDNSLVSNAFGFLRLPMNFQPYDSDADWVITGVPFDM
                     ATSGRAGGRHGPAAIRQVSTNLAWEHNRFPWNFDMRERLNVVDCGDLVYAFGDAREMS
                     EKLQAHAEKLLAAGKRMLSFGGDHFVTLPLLRAHAKHFGKMALVHFDAHTDTYANGCE
                     FDHGTMFYTAPKEGLIDPNHSVQIGIRTEFDKDNGFTVLDACQVNDRSVDDVIAQVKQ
                     IVGDMPVYLTFDIDCLDPAFAPGTGTPVIGGLTSDRAIKLVRGLKDLNIVGMDVVEVA
                     PAYDQSEITALAAATLALEMLYIQAAKKGE"
     gene            complement(24773..25531)
                     /locus_tag="JN001_000527"
     CDS             complement(24773..25531)
                     /locus_tag="JN001_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY9051861.1"
                     /translation="MKIRALLVAMSVATVLTGCQNMDSNGLLSSGAEAFQAYSLSDAQ
                     VKTLSDQACQEMDSKATIAPANSEYAKRLTTIANALGNNINGQPVNYKVYMAKDVNAF
                     AMANGCIRVYSGLMDMMTDNEVEAVIGHEMGHVALGHVKKGMQVALGTNAVRVAAASA
                     GGIVGSLSQSQLGDLGEKLVNSQFSQRQEAEADDYSYDLLRQRGISPAGLATSFEKLA
                     KLEEGRQSSMFDDHPASAERAQHIRDRMSADGIK"
     gene            25801..27792
                     /gene="tkt"
                     /locus_tag="JN001_000528"
     CDS             25801..27792
                     /gene="tkt"
                     /locus_tag="JN001_000528"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY9051862.1"
                     /translation="MSSRKELANAIRALSMDAVQKAKSGHPGAPMGMADIAEVLWRDF
                     LKHNPQNPSWADRDRFVLSNGHGSMLIYSLLHLTGYDLPMEELKNFRQLHSKTPGHPE
                     VGYTAGVETTTGPLGQGIANAVGMAIAEKTLAAQFNRPGHDIVDHYTYAFMGDGCMME
                     GISHEVCSLAGTLKLGKLIAFYDDNGISIDGHVEGWFTDDTAMRFEAYGWHVIRDIDG
                     HDAASIKRAVEEARAVTDKPSLLMCKTIIGFGSPNKAGTHDSHGAPLGDAEIALTREQ
                     LGWKYAPFEIPSEIYAQWDAKEAGQAKESAWNEKFAAYAKAYPQEAAEFTRRMKGEMP
                     SDFDAKAKEFIAKLQANPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSG
                     SKAINEDAAGNYIHYGVREFGMTAIANGISLHGGFLPYTSTFLMFVEYARNAVRMAAL
                     MKQRQVMVYTHDSIGLGEDGPTHQPVEQVASLRVTPNMSTWRPCDQVESAVAWKYGVE
                     RQDGPTALILSRQNLAQQERTEEQLANIARGGYVLKDCAGQPELIFIATGSEVELAVA
                     AYEKLTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIADYWYKYVG
                     LNGAIIGMTTFGESAPAELLFEEFGFTVDNVVAKAKELL"
     gene            28106..28549
                     /gene="cmtB"
                     /locus_tag="JN001_000529"
     CDS             28106..28549
                     /gene="cmtB"
                     /locus_tag="JN001_000529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001239649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IIA"
                     /protein_id="HAY9051863.1"
                     /translation="MRLSDYFPESSISVIHSAKDWQEAIDFSMVSLLDKNYISENYIQ
                     AIKDSTINNGPYYILAPGVAMPHARPECGALKTGMSLTLLEQGVYFPGNDEPIKLLIG
                     LSAADADSHIGAIQALSELLCEEEILEQLLTASSEKQLADIISHR"
     gene            28577..29965
                     /locus_tag="JN001_000530"
     CDS             28577..29965
                     /locus_tag="JN001_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HAY9051864.1"
                     /translation="MENKSARAKVQAFGGFLTAMVIPNIGAFIAWGFITALFIPTGWL
                     PNEHFAKIVGPMITYLLPVMIGSTGGHLVGGKRGAVMGGIGTIGVIVGAEIPMFLGSM
                     IMGPLGGLVIKYVDKALEKRIPAGFEMVINNFSLGIAGMLLCLLGFEVIGPAVLIANT
                     FVKECIEALVHAGYLPLLSVINEPAKVLFLNNAIDQGVYYPLGMQQASVNGKSIFFMV
                     ASNPGPGLGLLLAFTLFGKGMSKRSAPGAMIIHFLGGIHELYFPYVLMKPLTIIAMIA
                     GGMSGTWMFNLLDGGLVAGPSLGSIFAYLALTPKGSFLATIAGVTVGTLVSFAITSLI
                     LKMEKTVETESEDEFAQSTNAVKAMKQEGAFSLSRVKRIAFVCDTGMGSSAMGATTFR
                     KRLEKAGLAIEVKHYAIENVPADADIVVTHASLEGRVKRVTDKPLILINNYIGDPKLD
                     TLFNQLTAEHKH"
     gene            29980..31257
                     /locus_tag="JN001_000531"
     CDS             29980..31257
                     /locus_tag="JN001_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY9051865.1"
                     /translation="MKTKVAAIYGKRDVRLREFELPEITDNELLVSVISDSVCLSTWK
                     AALLGSEHKRVPDDLENHPVITGHECAGVIVEVGKNLTGKYKKGQRFVLQPAMGLPSG
                     YSAGYSYEYFGGNATYMIIPEIAINLGCVLPYHGSYFAAASLVEPMCCIIGAYHANYH
                     TTQYVYEHRMGVKPGGNIALLACAGPMGIGAIDYAINGGIQPSRVVVVDIDDKRLAQV
                     QKLLPVDLAASKGIELVYVNTKGMSDPVQTLRALTGDVGFDDIFVYAAVPAVVEMADE
                     LLAEDGCLNFFAGPTDKNFKVPFNFYNVHYNSTHVVGTSGGSTDDMKEAIALSATGQL
                     QPSFMVTHIGGLDAVPDTVLNLPDIPGGKKLIYNGVTMPLTAIADFAEKGKTDPLFKE
                     LARLVEETHGIWNEQAEKYLLAQFGIDIGEAAQ"
     gene            31254..32219
                     /gene="yggF"
                     /locus_tag="JN001_000532"
     CDS             31254..32219
                     /gene="yggF"
                     /locus_tag="JN001_000532"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY9051866.1"
                     /translation="MMSLAWPLFRVTEQAALAAWPQTGCGDKNKIDGLAVTAMRQALN
                     DVAFRGRVVIGEGEIDHAPMLWIGEEVGKGDGPEVDIAVDPIEGTRMVAMGQSNALAV
                     MAFAPRDSLLHAPDMYMKKLVVNRLAAGVIDLSLPLADNLRNVARALGKPLDKLRMVT
                     LDKPRLSAAIEEATQLGVKVFALPDGDVAASVLTCWQDNPYDVMYTIGGAPEGVISAC
                     AVKALGGDMQAELIDFCQAKGDYTENRQIAEQESKRCKAMGVDVNRVYSLDELVRGND
                     ILFSATGVTGGELVNGIQQTANGVRTQTLLIGGADQTCNIIDSLH"
     gene            32241..32750
                     /gene="fumE"
                     /locus_tag="JN001_000533"
     CDS             32241..32750
                     /gene="fumE"
                     /locus_tag="JN001_000533"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarase E"
                     /protein_id="HAY9051867.1"
                     /translation="MAKLTEDDVLEQLDAQDNLFSFMKTAHSILLQGIRQFLPSLFVD
                     NDEEIVEYAVKPLLAQSGPLDDIDVALRLIYALGKMDKWLYADITHFSQFWHYLNEQD
                     ETPGFADDMTWDFISNVNSITRNAMLYDALKAMKFADFAVWSEARFSGMVKTALTLAV
                     TTILKELTP"
     gene            32747..33460
                     /locus_tag="JN001_000534"
     CDS             32747..33460
                     /locus_tag="JN001_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside/nucleotide kinase family protein"
                     /protein_id="HAY9051868.1"
                     /translation="MKIELTVNGLKIQAQYQNEEIENVHKPLLRMLAALQTVNPQRRT
                     VVFLCAPPGTGKSTLTTFWEYLAQQDPELPAIQTLPMDGFHHYNSWLDAHQLRPFKGA
                     PETFDVAKLAENLRQVVEGDCTWPQYDRQKHDPVEDALHVTAPLVIVEGNWLLLDDEK
                     WCQLAQFCDFSIFINAPATALRERLVGRKLAGGVSLADAEAFYDRTDGPNVRRVLEES
                     LPANLTLMMTATGEYRLVD"
     gene            complement(33432..34109)
                     /locus_tag="JN001_000535"
     CDS             complement(33432..34109)
                     /locus_tag="JN001_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708691.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/molybdate ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY9051869.1"
                     /translation="MLTLNQISYRWPGAATDCLCDISLQLKQGEWLALTGDNGAGKST
                     LLRVMAGLLTPTAGTVMLQQQAMKNLKNRQRAAKVGVLFQEAENQLFHSTVADEIAFG
                     LKLQKCPADEITQRTHAALQCCQLADTANSHPLDLHSAQRRMVAVACLEALSPPLLLL
                     DEPSRDFDENWLSVFESWLEKCRQRGTSVVAISHDAAFTRRHFSRVVRLEDGVIRNVN
                     PPDDIHP"
     gene            complement(34103..34780)
                     /locus_tag="JN001_000536"
     CDS             complement(34103..34780)
                     /locus_tag="JN001_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HAY9051870.1"
                     /translation="MVTLEQFRYCPTHSTHPPFCYDFHYVKPGMVAIFGDNGSGKSTL
                     AQLMAGWYPDFLPGEITGTGTLLGTPIGHLPLNEQSATIQLVQQSPYLQLSGCTFSVE
                     EEVAFGPENLCLAEAEIMARIDAALTLTECQPLRHRHPATLSGGETQRVVIACAIAMQ
                     PKLLILDEAFSRLTPQASEMLLQRLQHWAFERGSLIILFERHRTPFLNYCQQAWQLQN
                     GALQPLC"
     gene            complement(34768..35475)
                     /locus_tag="JN001_000537"
     CDS             complement(34768..35475)
                     /locus_tag="JN001_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HAY9051871.1"
                     /translation="MHPFTSLTLWALAACTTLILPAQTILPIYSAATFFCLIALKATR
                     RRAKYVVWLMFSLGAGLWLVHGGWLPEWLSGTPRSPERWSHAITLWLRILVIVSTSQL
                     WMQYVPVQCFIRALFASRLPPGVAYLFAGPLLVVEQLKRQLAIIHEAQRARGVPLDEG
                     WYQRLRAMPALIIPLTHNALNDLAVRGAALDMRAFRIHNRRTTLWAPADSTLQRVARY
                     TMILLMLTEFGAWIWLR"
     gene            complement(35476..36054)
                     /locus_tag="JN001_000538"
     CDS             complement(35476..36054)
                     /locus_tag="JN001_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HAY9051872.1"
                     /translation="MARSHFSSQALVLIVISIAINMIGGQLASMVKLPIFLDSIGTLI
                     SAVLLGPVIGMLTGLLTNLLWGLLTDPIAAAFAPVAMVIGLVAGWLARAGWFRTLPKV
                     VVSGVIITLAVTVVAVPLRTALFGGVTGSGADLFVAWMHSMGQNLVESVAITVIGANL
                     VDKILTAVIVWLLLRQLPIRTTRHFPAMAAVR"
     gene            complement(36077..36508)
                     /locus_tag="JN001_000539"
     CDS             complement(36077..36508)
                     /locus_tag="JN001_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY9051873.1"
                     /translation="MMTLPYPYSSSARFYALRLLPGQEVFSQLHAFAQQHQLHAAWIA
                     GCTGSLTDVALRYARQEGTTLLNGTFEVISLNGTLEQSGEHLHLCVSDPHGTMLGGHM
                     MPGCTVRTTLELVIGSLEELAFSRQPCALSGYDELHISPVK"
     gene            36880..37899
                     /gene="epd"
                     /locus_tag="JN001_000540"
     CDS             36880..37899
                     /gene="epd"
                     /locus_tag="JN001_000540"
                     /EC_number="1.2.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="erythrose-4-phosphate dehydrogenase"
                     /protein_id="HAY9051874.1"
                     /translation="MTVRVAINGFGRIGRNVVRALYESGRRAEITVVAINELADAAGM
                     AHLLKYDTSHGRFAWEVRQERDQLFVGDDAIRVLHERSLQSLPWRELGVDVVLDCTGV
                     YGSREHGEAHIAAGAKKVLFSHPGSNDLDATVVYGVNQDQLRAEHRIVSNASCTTNCI
                     IPVIKLLDDAYGIESGTVTTIHSAMHDQQVIDAYHPDLRRTRAASQSIIPVDTKLAAG
                     ITRFFPQFNDRFEAIAVRVPTINVTAIDLSVTVKKPVKANEVNLLLQKAAQGAFHGIV
                     DYTELPLVSVDFNHDPHSAIVDGTQTRVSGAHLIKTLVWCDNEWGFANRMLDTTLAMA
                     TVAFR"
     gene            37949..39112
                     /gene="pgk"
                     /locus_tag="JN001_000541"
     CDS             37949..39112
                     /gene="pgk"
                     /locus_tag="JN001_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005761248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HAY9051875.1"
                     /translation="MSVIKMTDLDLAGKRVFIRADLNVPVKDGKVTSDARIRASLPTI
                     ELALKQGAKVMVTSHLGRPTEGEYNEEFSLLPVVNYLKDKLSNPVRLVKDYLDGVDVA
                     EGELVVLENVRFNKGEKKDDETLSKKYAALCDVFVMDAFGTAHRAQASTHGIGKFADV
                     ACAGPLLAAELDALGKALKEPARPMVAIVGGSKVSTKLTVLDSLSKIADQLIVGGGIA
                     NTFIAAQGHDVGKSLYEADLVDEAKRLLTTCNIPVPSDVRVATEFSETAPATLKSVND
                     VKADEQILDIGDASAQELAEILKNAKTILWNGPVGVFEFPNFRKGTEIVANAIADSEA
                     FSIAGGGDTLAAIDLFGIADKISYISTGGGAFLEFVEGKVLPAVAMLEERAKK"
     gene            39327..40406
                     /gene="fbaA"
                     /locus_tag="JN001_000542"
     CDS             39327..40406
                     /gene="fbaA"
                     /locus_tag="JN001_000542"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016505616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase"
                     /protein_id="HAY9051876.1"
                     /translation="MSKIFDFVKPGVITGDDVQKVFQVAKENNFALPAVNCVGTDSIN
                     AVLETAAKVKAPVIVQFSNGGASFIAGKGVKSDVPQGAAILGAISGAHHVHQMAEHYG
                     VPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSK
                     YLERMSKIGMTLEIELGCTGGEEDGVDNSHMDASALYTQPEDVDYAYTELSKISPRFT
                     IAASFGNVHGVYKPGNVVLTPTILRDSQEYVSKKHNLPHNSLSFVFHGGSGSTAQEIK
                     DSVSYGVVKMNIDTDTQWATWEGVLNYYKANEAYLQGQLGNPKGEDQPNKKYYDPRVW
                     LRAGQTSMIARLEKAFQELNAIDVL"
     gene            40764..41624
                     /locus_tag="JN001_000543"
     CDS             40764..41624
                     /locus_tag="JN001_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small-conductance mechanosensitive channel MscS"
                     /protein_id="HAY9051877.1"
                     /translation="MEDLNVVDSINGAGSWLVANQALLLSYAVNIVAALAIIIVGLII
                     ARMISNAVNRLMISRKIDATVADFLSALVRYGIIAFTLIAALGRVGVQTASVIAVLGA
                     AGLAVGLALQGSLSNLAAGVLLVMFRPFRAGEYVDLGGVAGTVLSVQIFSTTMRTADG
                     KIIVIPNGKIIAGNIINFSREPVRRNEFIIGVAYDSDIDQVKQILTNIIQSEDRILKD
                     REMTVRLNELGASSINFVVRVWSNSGDLQNVYWDVLERIKREFDAAGISFPYPQMDVN
                     FKRVKEDKAA"
     gene            41763..42387
                     /gene="argO"
                     /locus_tag="JN001_000544"
                     /pseudo
     CDS             41763..42387
                     /gene="argO"
                     /locus_tag="JN001_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311821.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arginine exporter ArgO"
     gene            42480..43220
                     /locus_tag="JN001_000545"
     CDS             42480..43220
                     /locus_tag="JN001_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidative stress defense protein"
                     /protein_id="HAY9051878.1"
                     /translation="MKFKVIALAALMGISGMAAQANELPDGPHIVTSGTASVDAVPDI
                     ATLAIEVNVAAKDAATAKKQADERVAQYISFLELNQIAKKDISSANLRTQPDYDYQDG
                     KSILKGYRAVRTVEVTLRQLDKLNSLLDGALKAGLNEIRSVSLGVAQPDAYKDKARKA
                     AIDNAIHQAQELANGFHRKLGPVYSVRYHVSNYQPSPMVRMMKADAAPVSAQETYEQA
                     AIQFDDQVDVVFQLEPVDQQPAKTPAAQ"
BASE COUNT        10603 a        10828 c        11558 g        10390 t
ORIGIN      
        1 atctaacccg acgtacaatg tgttattgtt gttcatgctg gcctccgtgg tggaaatacc
       61 ggggtgtagc aacagctcac ccatgcggct ctgacaacga tgttaacccg cgttaaatat
      121 cccacgttgg ccagcatctg tctcacggaa agtcatactg ccttatattc gcggtgaagt
      181 ggagttggtg cggattcgtg atgccgaagg gcgaattgcg gcagaagggg cgttgcctta
      241 tccacctggc gtgctttgcg tggtacccgg ggaagtctgg ggtggggcgg ttcaacgtta
      301 tttccttgca ctggaagaag gggtaaattt gttgccggga ttttcgccgg agctgcaagg
      361 tgtttatagc gaaaccgatg cggatggcat gaaacggttg tacggttatg tgttgaagta
      421 agaataaaaa aaacgggtca ccttctggcg acccgttttt ctttgcgtaa ttagtggcta
      481 accgtctgtg tgcctgtcgg gacacgaacg tgtttatatt tgaacatcgc catgaacgcg
      541 aaggccagaa ccacggagta accagcgaaa atcaaccata cggtctgcca gtcggtaatg
      601 ccgttttggg tgtacatctc aacaacttta ccgctcacga tgccgccgag gatacagccg
      661 aagccgttag tcatcatcag gaacatccct tgtgcactgg cgcgaattgc cgggctaact
      721 tctttttcga caaacaccga accagagatg ttgaagaagt cgaatgcgca accgtaaacg
      781 atcatcgaca gtaccagcag tacagtaccg aacggagtcg ggtcgccgta agcaaacagc
      841 gcaaaacgca ggatccacgc cacaatactg atcatcatta cgttcttaat accgtagcgg
      901 cttaagaaga acgggatggt cagaatgaac agggtttcag agatctgcga aatcgacatg
      961 atgattgacg catgctgcac aataaagctg ctggcaaaca tcggatcttt gtcgaagctg
     1021 tgcaggaagg tattaccgaa catgttggta atctgcagtt ccgcgcccag cagcattgag
     1081 aagataaaga agattgccat acgcttgttt ttaaacagcg cgaatgcatc gaggcccagc
     1141 agggttgtcc agctctgatt cgcttgctgt ttagcaaccg gaatatgcgg cagagtcagg
     1201 gtaaacagaa ccagaatggc ggaaagtgct gcgccaatat acagctgcat gtggcttaat
     1261 tcgaagccag acaggctcac cacccacatt gccatgataa agccgatggt gccccagata
     1321 cggattggcg ggaagtcagt aacgatatcc atcccggcat tttgcaggcg atagtaagag
     1381 atggtgttga ttaacccaag cgttggcata taagcaaacg agttaatcaa tatcacaagg
     1441 aacatcgcct ccggtgtcgt gacctgtgcc gccatgaaca gcgtgatagc gccaatggtg
     1501 tggcaaatgg catataccca tttcgcactt aaccatttgt cggccacaat ccccagcagc
     1561 gcaggcataa agaccgctgc gatacccagt gagctataaa ctgcgccaat agaagcaccg
     1621 tcaaacttca gggtaacaaa catataggag ccgagggtcg tcagccaact tccccacaga
     1681 cagaactgca gaaaagagag gattttcagc tgcagcttaa gattcatgtt aatttcctca
     1741 catcgtgatg cggatgagtg tttgaaaaag cacatttgac cgtgcgagat gatgggattc
     1801 tatcaacttc gcggactggt tttttgttac ctgtggcaaa taattgcaaa cattcccaat
     1861 ttgcaaaacg aaattgtgat gtggataaca tttttgcccc tgagcatcgt caggggcggt
     1921 taatggaatt atcggcggcg gtaggatttt tgcgcggtat tcactttata aagataacgg
     1981 cgagattccg cagagggatg gcgggtcgtc agcgtctgat aaacatcgcc cggcgtcatg
     2041 gtgttaataa tattggcagc ctgaatctta tcattcgaaa agactcgcag cacgctgcct
     2101 gcgccgccgt tataggcggt gatgacggca taacgccgcg atgttgggtt atcaattccg
     2161 ccgagataaa cattgttcag catcgccaga tacgcggtgc cggtatcaat attgctggca
     2221 ggatcaaaca agaaactgcg gctcggcgtg ccggatttcc cctgcgagcg gaacacatct
     2281 ttcccggcag tatgttgtac cacctgcatt aatcccagcg catcggaacg gctgaccgca
     2341 tacgggttaa aggaagattc ggtctgcata attgccagaa tcagcgactc atcaacgcca
     2401 tatttccgtg acgcctggcg gaccatgccg agatatttgt gcgcacgttt atcaaggtgg
     2461 ttcggtacca tgttaatggt gacgctgtag atgatacgca gcccgttact gcggctttgc
     2521 agacggtttt tcagcagata atccgcgaag ttgcttgcgc gaccttccca gcgaatcggc
     2581 tgcccggtgt tgtccaccac ctgaccgtaa aggaaaggtt ctttcgaaat cgtaatatca
     2641 tcaacgtcgg aatagagatc gaccgaactc ggatcgtcac ccatcagcaa cgttttgata
     2701 attgcccggc gcaaatgcgc ggcaggttct gtcccggcga tagtttcgat agtaatcgta
     2761 ccgtcatcga agttgatgtg gctgcgggtc tgatattgat cggtgtattt cacgtagtcc
     2821 ttaggaccgg cgatcaccac ctctttgaat ccccagatgt tctcaatatt gtgggcaaat
     2881 tgccccatca gaatatcaaa accgttggta tctttgaccc aggcttcgtt ataggtatcg
     2941 ccttttttgg tcgtcgaaca ggagatgagc aacggcgcaa tcaaagccag cgcgagatat
     3001 tttttcatca ttccgggtgc gtgttgtgtt tgtttttatg caagttgccg gaggcgtgct
     3061 ccggcactgt ttttattttt tatcttccgg cgtatagccc tcgatatgca cctctttacc
     3121 ctcgaacagg aagttgacca tctcctgctc aagcagcttg cggtgctcgg cattcatcat
     3181 gttgagtttc ttttcattaa tcagcatggt ttgcttgtgc tgccactgcg cccaggcttc
     3241 tttggagatc tcgttataga tgcgttttcc cagctcgccg gggtacagct gaaaatcctg
     3301 accttctgct tcacgttgca ggaaagtaca aaaaatcgtt ctgctcataa atcatcctct
     3361 ttatcgactc acgcgctaaa ccggcgcgcc agtgcgtaac tgctgtaaca aacgctccac
     3421 gggagccgcc aggccaactg acggcggttg cgctaagtta taccagagcg cattgccttc
     3481 atccatgcag ccggtgaatg acgacacggg aagccacata ggcacaatat ctaagtggaa
     3541 atggctgaag gtatgccgaa acgcggtcag ttgcgtcagg ttatcggcag caatctgccg
     3601 ttgcgccagc cactgccgca aactttcttc gtcggcaaac tgcgggaaac agtataaacc
     3661 gccccacaat ccgctcggcg gacgctgcgc cagcaatact tcatcttcgt gctgtaacag
     3721 caaaaagtag ccggtgcgct ccggcagcgt ctgtttcggt tttttgcccg gataaagcga
     3781 ccagctatta ttggcggcgg caatacatcc gttttgtagc ggacagagcg aacatttcgg
     3841 cttcgagcgc gtacaaatca tcgcgcccaa atccatcatc gcctgattaa accgttccac
     3901 gccgaccgcg ggcgtcacct gctcgctcaa actccataat ttattctcga cctctttttt
     3961 cccaggccag ccgcttacag catagcagcg cgccagcacg cgtttgacgt taccgtcgag
     4021 aatcggaaag tgcttaccca gagaaagcga gagaatcgcg cctgcggtgg aacgcccgac
     4081 gcccggtaac gccgcgactt cttcaaaggt ttccgggaat ttaccgccgt gtaaggtcgc
     4141 cacttgttgt gccgctttat gcagattgcg cgcgcgggcg taatagccaa gcccggtcca
     4201 caagtggaga acttcgtcga gcggcgcatt ggcgagatcg gtcaccgtcg ggaagcgcgc
     4261 cataaagcgt tcaaaatagg ggataacggt cgcaacctga gtttgttgca acatcacttc
     4321 tgagagccat actttgtagg gcgtcttgtc aatttgccag ggcagcgttt ttcgcccgta
     4381 tttatcgtac cagtccagaa cctgggctga aaattgcgac gcttgcatgg tcaccgaatt
     4441 cactgttgtt gggggcaaga ttgcagcaca gcgacggcag ggtgtaaacc ggaactttcc
     4501 gcagccacgg ccttatcatg cttgcatccg gcaactaact ttggataatg cccgttttca
     4561 gaacactttc acaagcgact aaatctttat gaaaaacgac gtcatttcac cggaatttga
     4621 tgaaaacggc cgcccactgc gccgtatccg tagttttgtg cgccgccagg ggcgactgac
     4681 caaaggccag gaacatgcgc tggaaaacta ctggccggtg atgggcgttg agttcagcga
     4741 agatatgctg gatttccccg cgctttttgg ccgtgaagcg ccggtgacgc ttgagattgg
     4801 ttttggcatg ggggcgtcgc tggtggcaat ggctaaagat cgccctgagc aggacttcct
     4861 cggcattgaa gtgcattcac cgggcgttgg tgcgtgcctg gcttctgcgc atgaagaagg
     4921 tttaaacaac ctgcgagtga tgtgtcacga tgcggttgaa gtgctgcata aaatgattcc
     4981 tgacaattca ttgcgcatgg tgcagctctt tttccctgac ccgtggcaca aagcgcgcca
     5041 taataaacgc cgtatcgtac aggtgccgtt tgccgaactg gtaaaaagca aactgcagct
     5101 ggggggcgta ttccatatgg cgaccgactg ggaaccttat gcggaacata tgcttgaagt
     5161 gatgtcttct attgacggtt ataaaaacct gtcagagagc aatgattacg taccgcgtcc
     5221 ggcatcacgt ccggtgacga aatttgaaca acgtggtcat cgtcttggtc acggagtatg
     5281 ggacttaatg ttcgagaggg tgaaataatg gcaaagaacc gtagccgtcg tctgcgtaaa
     5341 aaaatgcaca tcgacgaatt ccaggaatta ggattttcgg tggcatggcg attcccggaa
     5401 ggtacatcgg aagaacagat tgataaaacc gttgatgatt ttattaacga ggttatcgaa
     5461 ccgaacaaac tggcctttga cggcagcggt tatctggcct gggaaggtct gatctgcatg
     5521 caggaaatcg gcaaatgcac cgaagaacat caggcgattg tgcgtaagtg gctggaagag
     5581 cgcaaactgg atgaggtacg caccagcgaa cttttcgacg tttggtggga ctaagaaagc
     5641 atacgggcga tgacaaatgc aaaactgcct gatgcgctac gcttatcagg cctggaaaga
     5701 tgcacgatcg agtaggcggg ataaggtgtt tacgccgcat ccggcatgga aaacgcgtac
     5761 tttgttatca atctggggcc agcaaatgct ggcctgattt tttcttgagg gaagactatg
     5821 atgcgcaaaa tgctgctggc ggcagcactt tcagtgacgg caatgaccgc tcacgccgac
     5881 taccagtgca gcgtcacgcc gcgtgacgat gtgattgtca gcccgcaaac cgtgcaggtg
     5941 aagggcgaaa acggcaatct ggtgatcacg ccagacggca acgtgatgta taacggtaag
     6001 caatattccc tgaatgccgc ccagcgcgag caggcgaagg attatcaggc tgaactacgc
     6061 agcacgctgc cgtggattga tgaaggcgcg aaaagccgcg tcgaaaaagc ccgtattgcg
     6121 ctggataaaa ttatcgttca ggagatgggc gaaagcagca aaatgcgcag ccgtctgacc
     6181 aaacttgatg cgcaactgaa agagcagatg aaccgcatta tcgaaacgcg cagcgatggc
     6241 ctgacgtttc actataaagc cattgatcag gttcgcgccg aaggccagca attagtgaat
     6301 caggcaatgg gtggaatttt acaggacagc attaatgaaa tgggcgcgaa agcggtgctg
     6361 aaaagcggcg gtaacccatt acagaatgtg ctgggaagcc tgggggggct gcaatcctca
     6421 atccaaaccg agtggaaaaa gcaggaaaaa gatttccagc agtttggcaa agatgtttgt
     6481 agccgcgttg tgactctgga agatagccgc aaagccctgg tcgggaattt aaaataatcc
     6541 tctattttaa gacggcataa tactttttta tgccgtttaa ttcttcgttt tgttacctgc
     6601 ctctaacttt gtagagctcc aaaatatatt cacgttgtaa attgtttaac gtcaaatttc
     6661 ccatacagag ctaagggata atgcgtagcg ttcacgtaac tggaggaatg aaatggagtt
     6721 tttcaaaaag acggcacttg ccgcactggt tatgggtttt agtggtgcag cattggcatt
     6781 acccaatatc accattttag caaccggcgg gaccattgcc ggtggtggtg actccgcaac
     6841 caaatctaac tacacagcgg gtaaagttgg cgtagaaaat ctggttaatg cggtgccgca
     6901 actaaaagac attgcgaacg ttaaaggcga gcaggtagtg aatatcggct cccaggacat
     6961 gaacgataat gtctggctga cactggcgaa aaaaattaac accgactgcg ataaaaccga
     7021 cggcttcgtc attacccacg gtaccgacac gatggaagaa accgcttact tcctcgacct
     7081 gacggtgaaa tgcgacaaac cggtggtgat ggtcggcgca atgcgcccgt ccacgtccat
     7141 gagcgcagac ggtccattca acctgtataa cgcggtagtg accgcagctg ataaagcatc
     7201 cgctaatcgt ggcgtgctgg tggtgatgaa cgacaccgta ctggacggtc gcgatgtaac
     7261 caaaaccaac accaccgacg tagcgacctt caagtctgtt aactacggtc ctctgggata
     7321 cattcacaac ggtaagattg actaccaacg taccccggca cgtaagcaca ccagcgatac
     7381 gccattcgat gtctctaagc tgaatgagct gccgaaagtc ggcatcgttt ataactacgc
     7441 taacgcatcc gatcttccgg ctaaagcact ggtagatgcg ggctatgatg gcatcgttag
     7501 cgctggtgtg ggtaatggta acctgtataa atccgtgttc gacaccctgg caaccgccgc
     7561 gaaaaacggc actgcagtag tgcgttcttc ccgcgtaccg acgggtgcta ccactcagga
     7621 tgctgaagtg gatgatgcga aatacggctt cgtcgcctct ggcacgctga acccgcaaaa
     7681 agcgcgcgtc ctgctgcagc tggctctgac gcaaaccaaa gatccgcagc agatccagca
     7741 gatcttcaat cagtactaat cacctcgctc cggtatcgtg ccggggcttt ttcacttcag
     7801 acttacgtcc attgccaatt ttcattaccc taatgataat caccggaata aattatttcg
     7861 cgtgaggttt ttcgggtgaa aaagcaatgg attgttggca cggcactgct tatgttgatg
     7921 actggtaatg cctgggcaga tggcgaaccg ccaactgaaa atatcttaaa agatcaattc
     7981 aaaaagcagt atcacggcat tctcaagctt gatgctatca ccttaaaaaa tcttgatgct
     8041 aagggtaatc aggccacctg gtcagcggaa ggcgatgtct cttccagtga cgatctctat
     8101 acctgggtcg gtcagttggc agattacgaa ctgctcgaac agacctggac gaaagataaa
     8161 ccggtaaaat tctcggcgat gttaaccagt aaaggaacgc ccgcgtctgg ctggtcggtg
     8221 aacttttact cttttcagtc ggcagccagc gatcgtgggc gggtggtcga cgatatcaaa
     8281 acgaataata aatatctgat cgtgaatagc gaagatttca attatcgctt tagtcagctt
     8341 gaatctgcgt tgaataccca gaagaactcg attcctgcgc tggaaaagga agtgaaagcg
     8401 cttgataagc aaatggtggc ggcgcagaaa gcagcggatg catattgggg aaaagatgca
     8461 aacggtaagc aaatgacccg cgaagaagcc tttaaaaaaa ttcaccaaca gcgtgatgag
     8521 tttaataaac agaacgatag cgaggcgttc gcggttaaat atgacaaaga ggtttatcaa
     8581 ccggcgattg cggcatgtca taaacagagt gaagagtgtt atgaagtgcc gattcagcag
     8641 aaacgagatt tcgatatcaa cgaacaacgg cgacagactt ttctgcaatc acaaaaactc
     8701 agccgtaaat tgcaggatga ctgggtaacg ctcgaaaaag ggcaatatcc gttaacgatg
     8761 aaagtttcag aaataaacag taaaaaagtc gcgattttga tgaaaattga cgatatcaac
     8821 caagctaatg aacgctggaa aaaagatacc gaacaactgc ggcgcaatgg ggtgattaag
     8881 taagtttgat atagtgcacg atttgtagca ggatgcggcg ttgaccccgc atccggcaat
     8941 caacgtctga tgcgacgctt gcgcgtctta tcagacctac aaccgttgcc acatgtaggc
     9001 tggataaggc gttcacgccg catccggcaa tacaagttta ctcagccaga aaaagctcca
     9061 gcagcgaatt taaaaacagc ttcccatgtt ccgttatctg ccagtaatcc gcacattctg
     9121 tgagataacc ctgggcaatc gcctcgtcta actgtgggcg aatcacatct tcgcaaagcc
     9181 cggtatacgc actaaactct gcgcgtggcg cggcctccag caagcgaaag cggttcataa
     9241 agaactcaaa cggcttatct gcggcttcga catcacgctg gctttccaga taccttcctt
     9301 gcataaaacc acgaggatga cgcgttttag tggtacgcag aatgcgccca tccgggaagg
     9361 tgactttgcc gtgcgcgccg cagccaatac cgatgtagtc accaaatcgc cagtagttga
     9421 gattgtgctg gcactgataa ccgggtttgg cgtaagcgga agtttcatat tgctgataac
     9481 ccgctgcggt taataactga tgcccctgtt cgaaaatatc ccacagcgcg tcatcgtccg
     9541 gcagcaccgg tggtcgcgaa ccaaacagcg tattgggttc gatggtcagt tgataccagg
     9601 aaagatgcgg cggattcagt tcaatggcct ggcgtagatc gccaagcgcc tcttccagtg
     9661 attgatccgg tagtccatgc atcaaatcaa ggttaaagct acgtaaccct aaaccgctcg
     9721 ccagctttgc cgctcgtttc gcttcttgcg ggccatgaat gcgcccaagt cgtttcagct
     9781 tttcttcgct aaaactctgc acaccaatag agatgcggtt cacaccagca cgctgataat
     9841 cgacaaagcg atcggcttct accgtaccag ggttcgcttc catagtaatt tctgcatccg
     9901 ctgccagcgg caaacgcgca cgcacgccgt ccagcagcgt ttgcatcgcc gggccggaaa
     9961 gcaggctcgg cgtaccaccg ccaataaaga ttgtctttac ttcacggccc tgagcgtaag
    10021 ccacatcatt gtccagatcg caaagcagat gctgaacata atcgtcgtgc ggcacttctc
    10081 ctttcaacgc gtgagagttg aaatcgcagt acgggcattt ctgcacgcac cacgggatgt
    10141 gaatgtagag actcagcggc ggtaatttaa ccattacgta aagcgtccag cagcagtttc
    10201 aacgcctgac cacggtggga aatggcgctc ttttcttcgc gggtcagttc ggcggcggtt
    10261 ttcccttcgg aaggtacgaa gaagattgga tcataaccaa agccaccagt gcccgctggt
    10321 tcgcgagtaa tcacgcccgg ccagctgccg tggcatacca gcggagtcgg atcttccgcg
    10381 tgacgcagat ataccagcac gcagtggaaa cgtgcctgac gttggtcgtc cggtacgtct
    10441 ttcagtgttt ccaacagttt ttgcagattc ttttgatcgg tcgcgtcttc accggaataa
    10501 cgcgcggagt aaatacccgg cgcgccaccc agcgcatcta ccgccagacc agagtcgtcg
    10561 gcaattgccg gtaaaccggt cacttttgcc gcatggcgcg ctttcagaat cgcgttttcg
    10621 ataaaggtta ggccggtttc ttcagcggaa tcaacgccga ggtctgtttg tgccacgata
    10681 tcaagaccaa agtcgctaag cagcgacgcc agctcacgca ctttaccggc attgccggtt
    10741 gcgaggacaa ctttttgcat aggataccta attaattaac gccgcgattt ctggcgggat
    10801 ttgttgcgga ttaatgattt taatttgttt gtggcggcca agttcgcctt tttcaatcac
    10861 cacctggctt ttggcaaccc ggaattgctt accgagaaac ttcaccagat gactgttggc
    10921 ctggccgtca actggcggcg cggtaatggc gactttaact tcgtcgccat gtaaaccgac
    10981 aatagaatca cggctggctt tcggctgaat atagagccgt aaaaccagac cgtcatcatt
    11041 aactgttacg gcattcataa cgccatccac atccccggca gcaggatgtt tccggttgcc
    11101 tgtaatactt ctgcgacacc catattgatg acatacagca gcagaacgag gatcatcggc
    11161 gagaaatcaa tcccacccat tgccggtagc aagcggcgaa tcgggcgcag cagcggatcg
    11221 gccagctgaa tcagcacgta ttcaatcggg ctacgaccct ggcttaccca gctcataatc
    11281 gccatcacca gcaggaccca gaaaatcagc aagccgatgg ttttcagcag aatcagtaaa
    11341 ccggcaatcc agatgattgg caggaaggtc accactttaa acagcacaat ggctttgata
    11401 aaactgagaa tataggcaac cagcagcgag gcgctgtcaa tgggacccat tgccggaata
    11461 acgcggcgca gtggcccgat aattggctgc gttaccttca ctacaaactg tgagaagggg
    11521 ttgtaaaaat cacaatgagc ccactgcatc cagatgcgta ataacagcac catggtatac
    11581 agctcaatga ccgttgaaag caggaaagtc aacgtattca tggcgttcct ttaattcctt
    11641 attttttaga gtaatcacgc gcaccaaaaa ttgcagtgcc gatacgaacc atcgtgctac
    11701 ctgccgcaat ggcggcttcc atatcgtccg acattcccag agagagcgtg tcgatatgcg
    11761 ggtagcgcgt tttcagtccg gcaaatgcta cagccatttg gcgtgcaact tcaaactgcc
    11821 ttacatattc tgactcaggc gcagggattg ccatcagccc gcgcagacgt aaacgcggta
    11881 gttcagcgac cgccgctgcc agctcgtcca gttctgccag ttgaatcccg gacttactgt
    11941 tttcatcact aatattaatt tgaatcagta cgttaagagg gggaagttct gccgggcgct
    12001 gatcgttgag gcgggtagca atgcgcaaac ggtcgatggt atgacaccag tcgaaatgct
    12061 ctgccaccag gcggctttta ttagactgca acgggccaat aaaatgccat tctaatcctg
    12121 ttacgcccag ttcctgaaag tggcgaattt tatctacccc ttcctgaacg tagttttcac
    12181 caaattgacg ctgcccggca tcaatggctt ctgcgatggc gctcgcaggt tttgttttac
    12241 tgactgcaag cagcgtaatt tcttctggag aacggccgca acgcgttgca gccgctgaga
    12301 ttttgtcccg gacctgtgcc aggttatgcg caatatcgtt cattttccga ggatcttagt
    12361 atgaatatgg aagaaattgt ggcccttagt gtaaagcata acgtctcgga tctacacctg
    12421 tgcagcgcct ggcccgcacg atggcgcatt cgcgggctaa tggaagctgc gccgtttgat
    12481 gcgctggacg tcgaagagct actgcgggag tggctggatg acgatcagcg ggcaatattg
    12541 ctggaaaatg gccagctgga ttttgccgtg tcgctggcgg aaaaccagcg attgcgtggc
    12601 agcgcattcg cgcaacggca tggcatttcg ctggcgttac ggctgttacc ttcgcactgc
    12661 ccgcagctcg aacagcttgg cgcaccaacg gtattgccgg aattactcaa gagcgagaat
    12721 ggcctgattc tggtgacggg ggcgacgggg agcggcaaat ctaccacgct ggcggcgatg
    12781 gttggctatc tcaatcaaca tgccgatgcg catattctga cgctggaaga tcctgttgaa
    12841 tatatctatg ccagccagcg atgtttgatc cagcagcggg aaattggttt gcactgtatg
    12901 acgttcgcat cgggattgcg ggccgcattg cgggaagatc ctgatgtgat tttgctcgga
    12961 gagctgcgtg acagcgagac aatccgtctg gcactgacgg cggcagaaac cgggcatttg
    13021 gtgctagcaa cattacatac gcgtggtgcc gcgcaggcag ttgagcgact ggtggattca
    13081 tttccggcgc aggaaaaaga tcccgtacgt aatcaactgg caggtagttt acgggccgtg
    13141 ttgtcacaaa agctggaagt ggataaacag gaaggacgcg tggcgctgtt tgaattattg
    13201 attaacactc ccgcggtggg gaatttgatt cgcgaaggga aaacccacca gttaccgcat
    13261 gttattcaaa ccgggcagca ggtggggatg ataacgtttc agcagagtta tcagcagcgg
    13321 gtgggggaag ggcgtttgtg acgttgccat gcccgatgcg caagtttata gggcctataa
    13381 aggcaataaa tgtctgatgc gacgctaacg cgtcttatca gacctacagc cgctgccaga
    13441 tgtgtgctgg ataaggcgtt cacgccgcat ccggcaagat ggcggtaacg actatccgcc
    13501 aggcttttag atcgccttaa tatccctgct cgaaatagct ttcgagaata ataaccgcag
    13561 aggcagagtc gactttgcct ttgttgagcg cccgatagcc gccctgttca aacagaccgg
    13621 aacgggcttc cacggtgcta agacgttcgt catggagctt tacttcaaca ccgaaacgac
    13681 catgaatacg gttggcaaat ttacgcgctc tggcagtcaa tggttgctcg gtgccgtcca
    13741 tattcagcgg caaaccgacg atgatttcgt ccggctgcca ctctttcagt aaacgttcga
    13801 tgaggttcca gtccggcgta ccgtcctgtg ctttaattgc aggcaaaggg cgagcagtgc
    13861 cggtaatgcg ttggccgacc gctacgccaa tgcttttggt gccgaagtcg aaggcgagta
    13921 aggttccact catcaggcgt gccctgccac accaggcatg gtgagaatat ccacaccaat
    13981 cagttttgcc gcctcgcgcc agcggtcggc aatcggcgtt ttgaacagaa tattcagatc
    14041 cgccgaggcc gttagccacg cgttatcgag aatttcttgt tccagttgac ctttttccca
    14101 ggaggcatag cccagagcca ccaatacgtc agacggttgt ttatcggtgc cgagcgtttc
    14161 cagcacatcg cgggaagtgg tcatcaccgt gttgtctgaa atgcgaatgc tggaagcaaa
    14221 attggagggc ggagtatgca aaataaaccc gcgatcttca gccagtgggc cgccgagcat
    14281 aaccggttta tccagacgga ttgattcatc acgcggctcc ggcgtgatct tcagcttttc
    14341 cagaatccct tcaattttga gattttccag cggcttgttg acgatgatcc ccattgcacc
    14401 attggtatta tgttcgcaaa tgtagaccac ggaacgacgg aaaatcggat cctggagagc
    14461 aggcatggca ataagaaagt gatgctgtaa attcattgtc agaggttctg tttcctggtt
    14521 caaaaaagca acagcgccca gtatgcgtgg aaagaagggc gctgtcactc agagtctcaa
    14581 cgagatcctt ctcgctaagg tgggttactg ctgctgtaaa cgtgcttcga tggcatccat
    14641 taacattccg gtgatcgaca ccggaaactc tgcttcaatc tcacgaatac aggttgggct
    14701 ggtgacgtta atttcagtca gacggtcgcc gatgatatcc agaccaacaa aaatcagccc
    14761 tttttctttc agcgtcggcc cgatctgacg ggcgattttc cagtcacttt ccgtcagcgg
    14821 ccgaggttca ccgcgaccac cggcagccag attgccacgg gtttcgcccc cctgcggaat
    14881 acgcgccagg cagtacggta ccggctcgcc atccaccacc agcacgcgtt tgtcgccatc
    14941 tttaatggct ggcaggtaat tttgcgccat gcagtagcga gtgccatgct cagtcagggt
    15001 ttcggcaatc acgccgaggt ttggatcgcc ttctttcacg cggaaaatcg acgcgccgcc
    15061 cataccgtcc agcggcttaa gaatgatgtc gctgtgtttc tcccagaacg cttttagctg
    15121 cgctttattg cgcgtaacca gcgtttctgg cgttaagtca gagaaccagg cggtaaacag
    15181 tttctcgtta cagtcgcgca ggctctgcgg cttgttaacg atcagcgtcc ctttctcttc
    15241 ggcacgttcc agaatatagg tcgcgtagat aaactcggta tcaaacggcg ggtctttacg
    15301 catcaggagc acatcgagat cggccagcgg cagatcctgt tcaccgacga acgaaaacca
    15361 ctcttcgtag ttctgcttca cgttcagcgt gcgggtatgg gcgcgagctt cgccattgat
    15421 cagatacaga tcgcccatct ccatatagtg aagttcgtaa ccacgacgct gtgcttccag
    15481 caacatagcg aaactggaat ctttcttgat gttgatgttt gcgatggggt ccatcacgat
    15541 gccgagcttg atcattattc ttctccgtta gcccaaatcg ccaaatcgta cttgtagcgc
    15601 ggtaatggcg gtgagcgcag ttgtctctgt acgcaaaacg cgaggtccca acaggatatc
    15661 agtaaattga tagcgggcag tcatggcaat ttcatctgcc gataaaccgc cttccgggcc
    15721 aatcagcagg cggacgcgtt caaccggtaa cggcaacgta ttgatgctgt tactggcgcg
    15781 cgggtgaaga ttcagtttca gtccttcatc ctgctctgca caccaggctt ccagatccat
    15841 cgctggacgg atttccggca cccggttacg accacactgc tcacaggcag caattgcaat
    15901 cttctgccac tgctggagct tcttgttcag acgttcacta tccagtttaa cgccgcagcg
    15961 ctcagaaaaa agtggcgtaa tgaggcttac accgagttcg atcgatttct ggatcgtaaa
    16021 ttccattttt tcaccacgcg acatcacctg accgaggtga atatgcagcg gagattcgcg
    16081 atcgtcgatc ttgccttcca gcaccttcac ttccacgctt tttttgctgg cgctggtaat
    16141 ttcggcgtca aagacctggt tgctaccgtc aaacaattgc aacgcctgcc ccggccccat
    16201 gcgcagtacg cgcccgatat ggttggcggc atcttcgcaa agcgcgatgt gagaatggct
    16261 ggtcagtggt tcaggatgat aaatgcgggg gatacgcata gttaaaaatc cgcgtcgtct
    16321 ccccacgcgg ttgtacgcgt ggggtagggg ttaacaaaaa gagtcccgct agtgtaggtt
    16381 agctctttcg cgcctggcaa gcgcgttgca catacgggtt atgattgcct tgcaccttcg
    16441 cgatgcgttc atcgcgctcg cactcccagt cggtaaccgg atacatcttg ttccatgcgt
    16501 tgaacagctg cgtttgctgg cgagagagtg tcaggttgta ttggtcgcgc atatagaagt
    16561 aggtgcgcgc aatggcaccg cgtgcacgcg ctggtggttc ggcagctttt tctttgaaat
    16621 cgaccttcat ggcgcattga ccgtactggc cttcgccgcc attccactgg ctgtacataa
    16681 agttgccgcg atcgccattc acctcaccga ctgacggctg caggttatgc atatcgcttt
    16741 ccatcttgcg atagaccgga tctttagcgc agtttttacg tccaccgtcc tgccagcact
    16801 ggcgctggtg accgaactgc caggcgggaa cgacgtgttc ccactctacg cggctggctc
    16861 ggttttcatt tttgcgcacc tgatagccgc acgattgcag atcaacaacg ccttttttgc
    16921 cctgccagtt aattttacat ccgcaataaa acgtaccggg cgcgtcagcg tggactttta
    16981 ccgccgcggc tttcgcctga gaaaaactat tgataccttc ggccaacgcc gggccggaaa
    17041 atgctgcgct cagtaccacc gcagcaatag acaaataacg gtacatcact tactccgtgt
    17101 taaaacgagc cagcaacgta gcgaaagttg ttttggtatg caatcagcca gatcaggaaa
    17161 gttcctgata gttcagatgg ttattttgcg accagttgtt cgccgcagtg aacacagcga
    17221 tagacggctt cgccacgaac tacgcgatta tggcggcgta cggtaagctg atgctcctgg
    17281 cacttgcagc ggtaggggaa ggtgttgcga cgcacggatt gcagttcgaa ctgatgcgta
    17341 cgacgggcgg gaacacccag cacgttttcc atcatccact tccactcttt gccatgtggt
    17401 gctacgcgcc cgaaatgttt ccataccagc aaatgtgcca gttcgtgcgg caccacttct
    17461 tcaataaagg cttcactgtt ttccaacagc aaaacgggat tgaggcggat ttcatagctt
    17521 tccagccagg ctgttccggc ggaggtgccg cgctgggtat aagagagttt tggctccggg
    17581 tagttacgcc ccaatttcag gttagcctgg gcgagttttt cccgcaggcg acgcataacg
    17641 gcctgttgga tggcgatagg gagacgggat gttttcatag cggcagagga tagagcgaag
    17701 aaaagatgac tgcaagaggt ggcttcctcc gcgatgggag gaagcttggg gagattaatc
    17761 gtgagcgcct atttcgcgca gtttacgacc tttcatcaga ttacgttcaa tatgttccag
    17821 cgaaacgtgt ttggtttccg gtaccagcca caatgtcagc aggataaaca gtacgttcag
    17881 agccgcatac acccagaagg tgttggcgtt acccagtgtg ttgagcatgg tcaggaacgt
    17941 tgcgccaacg atcatgttgg caatccagtt ggtggcggta gagcaggtga tgccaaaatc
    18001 gcggcctttc agcggctgaa tttcggagca cagtacccaa atcagcggac cggcactcat
    18061 ggcaaaaccg acaataaaca tcagcagcat ggcgatggcg aaatactgcg ctgacggaga
    18121 gtgaataccg atatgcatca ttgtaccgag tacgcccatg ccagcagcca tcaccaggaa
    18181 gcccagcgtt agcgttggtt tacgtcccca gcggtcaaca aggccgattg cgataaaggt
    18241 ggcaagtacg ttggtcaggc cgacaatcac tgtcccccac atttgctcgg tagtgttggt
    18301 ataacccgcc agttcgaaga ttttcggcgc gtaatacatg atgacgttca tcccggtgaa
    18361 ttgctgcatt acctgtaaca gtacgccaag gaacaccgcg cggcggaagt tgctattctc
    18421 tttaaacagc gcccagccac tctgtttaac ctgcaaactt tcacggattt catccagttc
    18481 gcgtttcgct tccgcgctgg tgtcacgcag gcgtagcagc acgcgttcgg catcaacaaa
    18541 acggcgtttg gcggcaaacc aacgtgggct gtctggcagg aagaagacac caatcagcag
    18601 caaaattgcc gggatgataa tcacacccag catccagcgc catgcaccgg tgtagctgaa
    18661 ggcggtatca gaaagataag caccgaggat cccgatagtg atcatcaact gatacatcga
    18721 gatcatactg ccacgaattt tttccggcgc aatttcagag aggtacagcg gtgcggtata
    18781 agaggccaca cccaccgcca gccccagtag aacgcgggaa agaatcagta cttcaacgtt
    18841 tggcgcagcc gcagagaaca gcgaaccggc aacaaacaaa attgcgccga tcatcaggct
    18901 ctttttgcgc ccgagtttaa aggagagcca gccgctgccc accgcaccga ctgccgcacc
    18961 gaacatcatg gagcttacga cccattcttg cgtgtgcgaa gtaatctgga attcatctgc
    19021 aataaacggc agtgcgccag caattacacc gatatccagg ccaaagagta atcccgccag
    19081 agcggcaagg aagcagacga aaaacgtcat tgccttgttt gaccgcccct gttttttagc
    19141 gtcaggcatg atgccctcca atatggttat tttttattgt gaattaagat aggtgagtac
    19201 gacgtaaaaa gatgtgaagc aaatcacatc agtgtaatcg cttacactaa catttatctt
    19261 agttatggtt taagtgcatg aaaataattg agttatatca tcatagatta aacgctgtta
    19321 tctgcaatta agactttact gaaaagaaat gtaacaactg tgaaaactga ataataatat
    19381 gaaaatatta caaatatttg gctggtgtta ttggtgtaat cggtttcagt agtgatgata
    19441 atttgcgata aaacgtgttg aggaagaatg atgttattgt gcgggcagct ttttgccgga
    19501 tgcggcgtga atgcctatcc accgcggtga ggtaaaagaa aaaggccagc gcgaggctgg
    19561 cctttgaaag caggtgaaga aagattactt cagaccggca gcatcgcgca gcagctgcgc
    19621 tttgtcggtt ttttcccacg ggaaatgttc acgaccaaag tgaccgtatg ctgcggtttc
    19681 tttgtagatc gggtgcagca gatccagcat ctgaatcaga ccgtatgggc gcaggtcgaa
    19741 gaactcacgt accagcagag tcagttgttc agaaggcact ttctcagtac cgaaagtttc
    19801 taccatgatg gaggtcggtt cagccacgcc gattgcgtag gaaacctgaa tttcacaacg
    19861 atcggccagg ccagcagcaa cgatgttttt cgcgacataa cgtgctgcgt aggctgcgga
    19921 acggtccact tttgatggat ctttaccaga gaatgctccg ccaccgtgac gtgccatgcc
    19981 gccgtaggta tcaacgataa ttttacgacc agtcagaccg cagtcaccca tcgggccacc
    20041 gataacaaaa cgaccggtcg ggttgatgaa gaatgtggtg gcagaagtca gccattcagc
    20101 gggcagaatt ggcttgatga tctcttccat taccgcttct tgcagcgatt tctggtcgat
    20161 ctcttcagag tgctgagtgg aaagcacgac agcatcaata ccaacgattt tgccgtcgtc
    20221 atactggaaa gtcacctggc ttttcgcgtc cgggcgcagc cacggcagag tgccgttttt
    20281 acgcacttca gcctgacgct gtaccagacg gtgtgcatag gtgataggtg ctggcatcag
    20341 cacgtcggtt tcattagttg cgtagccaaa catcagaccc tggtcacccg cgccctgttc
    20401 cagcggatcg gcacggtcaa cgccctggtt gatgtcagga gactgtttgc cgatagcgct
    20461 cagaaccgca caggagttag cgtcaaagcc catgtcggaa tgcacatagc caatttcgcg
    20521 aacggtgtta cgagtgatct cttcgatgtc tacccaggcg ctggtggtga tttcgccgcc
    20581 aactaaaacc atgccggttt ttacgtaggt ttcgcaagca acgcgtgctt tcggatcctg
    20641 ttcgaggatc gcgtctaaaa cggcatcaga gatttggtca gcaattttgt caggatgccc
    20701 ttcagagacg gactcggacg taaaaaggtg ttttgccata tttaatatca cctaaagaga
    20761 atttggttag ctcaaactgt tgtgtggatt ttctgtggta gcggatccta ccacgactct
    20821 gcaggttaaa aacactggca gtctgagtgt taatcggtat ggatggatta acatctagat
    20881 ggctatttta ggtcaattct tcacccgatt tccacttttt tttgaatcgt gtctcattct
    20941 gttaaaaacg tggctggaaa ttttttctga caatgccggc attctgcgta tttatatttt
    21001 gcaattttct gccattgtgg ggtataaaac gcggcgcgcg gcttaaataa aaagcacacg
    21061 acgtttcttt cgtgttgcca cttccagccg ggttgaaatc agagttttgg cttgtgggtt
    21121 cgtcttaaca ggcggccgtg gaggtgatac gaaataatga accgtagtct gctgcttaac
    21181 ctgtctcacc gttctggtga agattcgttc cccgcactct gcatctctgc tttgcatacc
    21241 tgccgatgtt atacccatct cggcgcttct caggattcaa gagctggtta cagttactga
    21301 ggactgaaca agggcgctct tgtaaaaaca agagttttct cgtggtttcg ccgaactgtc
    21361 acacttacgt tcggttatgt gcttaataat gttatgaaaa agaaaccggt tgcgcagttg
    21421 gagcgtcagc attcactgct ggaaaatcca tgtgcttatg ggttgttatc gcagttccag
    21481 gctgcgatag tcgttaactg ttttacactt aataaaataa tttgaggttc gctatgtctg
    21541 acgacatgtc tatgggtttg ccttcgtcag cgggcgaaca cggtgtacta cgctccatgc
    21601 aggaggttgc aatgagctcc caggaagcca gcaagatgct gcgtacttac aatattgcct
    21661 ggtggggcaa taactactat gacgttaacg agctgggcca catcagcgtg tgcccggacc
    21721 cggacgtccc ggaagctcgc gtcgatctcg cgcagttagt gaaaactcgt gaagcacagg
    21781 gtcagcgtct gcctgcactg ttctgtttcc cacagatcct gcagcaccgt ttgcgttcca
    21841 ttaacgccgc gttcaaacgt gcgagggaat cctacggcta taacggcgat tacttccttg
    21901 tttatccgat caaagttaac cagcaccgcc gcgtgattga gtccctgatt cattcgggcg
    21961 aaccgctggg tctggaagcc ggttccaaag ccgagttgat ggcagtgctg gcacatgctg
    22021 gcatgacccg tagcgtcatc gtctgcaacg gttataaaga ccgcgaatat atccgcctgg
    22081 cattaattgg cgagaagatg gggcacaagg tctatctggt cattgagaag atgtcagaaa
    22141 tcgccattgt gctggatgaa gcagaacgtc tgaatgtcgt tcctcgtctg ggcgtgcgtg
    22201 cacgtctggc ttcgcagggc tcgggtaaat ggcagtcttc cggcggggaa aaatcgaagt
    22261 tcggcctggc tgcgactcag gtactgcaac tggttgaaac gctgcgtgaa gctgggcgtc
    22321 tcgacagcct gcaactactg cacttccacc tcggttcgca gatggcgaat attcgcgata
    22381 tcgccacggg cgttcgtgaa tccgcgcgtt tctatgtgga actgcacaag ctgggcgtca
    22441 atattcagtg cttcgacgtc ggcggcggtc tgggcgtgga ctatgaaggc acccgttcgc
    22501 agtctgactg ctccgtaaac tacggcctca atgaatatgc caacaacatc atctgggcga
    22561 ttggtgatgc gtgtgaagaa aacggtctgc cgcatccgac ggtaatcacc gaatcgggtc
    22621 gtgcggtgac tgcgcatcac accgtgctgg tgtctaatat catcggcgtg gaacgtaacg
    22681 aatacacggt gccgaccgcg cctgcagaag atgcgccgcg cgcgctgcaa agcatgtggg
    22741 aaacctggca ggagatgcac gaaccgggaa ctcgccgttc tctgcgtgaa tggttacacg
    22801 acagtcagat ggatctgcac gacattcata tcggctactc ttccggcacc tttagcctgc
    22861 aagaacgtgc atgggcagaa caactctatc tgagcatgtg ccatgaagtg cagaagcaac
    22921 tggatccgca aaaccgtgcg catcgtccga taatcgacga actgcaggaa cgtatggcgg
    22981 acaaaatgta cgtcaatttc tcgctgttcc agtcaatgcc ggacgcatgg gggatcgacc
    23041 agttgttccc ggttctgccg ctggaagggc tggctcaagt gccggaacgt cgcgctgtgc
    23101 tgctggatat tacctgtgac tctgacggtg ctatcgacca ctatattgat ggtgatggta
    23161 ttgccacgac aatgccaatg ccggagtacg atccagagaa tccgccgatg ctcggtttct
    23221 ttatggtcgg cgcatatcag gagatcctcg gcaacatgca caacctgttc ggtgataccg
    23281 aagcggttga cgtgttcgtc ttccctgacg gtagtgtaga agtggaactg tctgacgaag
    23341 gcgataccgt tgcggatatg ctgcaatatg tgcagctcga tccgaaaacg ctgttaactc
    23401 agttccgcga tcaagtgaag aaaaccgatc ttgatgctga actgcaacaa cagttccttg
    23461 aagagttcga ggcaggtttg tacggttata cttatctgga agatgagtaa gtccgtatta
    23521 cttgaatccg cttaatttag cggtgataat ccgccacaat ttattgtgac aaatccaacc
    23581 cttcctcgtc gggcctaacg acgcggaagg gtttttttat atcgactttg taataggagt
    23641 ccatccatga gcaccttagg tcatcaatac gataactcac tggtttccaa cgcctttggt
    23701 tttttacgcc tgccgatgaa cttccagccg tatgacagcg atgctgactg ggtgattact
    23761 ggtgtgccgt tcgatatggc cacttctggt cgtgcggggg gacgccacgg tccggcagcg
    23821 atccgtcagg tttcgacgaa tcttgcctgg gaacacaatc gcttcccgtg gaatttcgac
    23881 atgcgtgagc gcctgaacgt cgtggactgc ggcgatctgg tatatgcctt tggcgatgcc
    23941 cgtgagatga gcgaaaaact gcaggcacac gccgagaagc tgctggctgc cggtaagcgt
    24001 atgctctctt tcggtggtga tcactttgtt acgctgccgc tgctgcgtgc tcatgcgaag
    24061 catttcggca aaatggcgct ggtacacttt gacgcccaca ccgataccta cgcgaacggt
    24121 tgtgaatttg accacggcac catgttctat accgcgccga aagaaggtct gatcgacccg
    24181 aatcattccg tgcagattgg tattcgtacc gagtttgata aagacaacgg ttttaccgtg
    24241 ctggacgcct gccaggtgaa cgatcgcagc gtggatgacg ttatcgccca agtgaaacag
    24301 attgtgggtg atatgccggt ttacctgacc tttgatatcg actgcctaga tcctgctttc
    24361 gcgccgggaa ccggtacgcc agtgattggc ggcctgacct ccgatcgcgc cattaaactg
    24421 gtacgcggcc tgaaagatct caacattgtt gggatggacg tagtggaagt ggctccggca
    24481 tacgatcagt cggaaatcac cgctctggct gcggcgacgc tggcgctgga gatgctgtat
    24541 attcaggcgg cgaaaaaggg cgagtaagca ccagatgcga tgcgcacggg taaaacgtgc
    24601 cattaatgtc ggatgcggcg tgaacgcctt atccgaccta cgttcggcac ccgtaggccg
    24661 gataagatgc gccagcatcg catccggcaa tgcgcacaag gtaacaaatg tgccattaat
    24721 gtcagatgcg gcgtgaacgc cttatctgac ctacgttcga caccaccagg ctttacttaa
    24781 tcccatccgc gctcatgcga tcgcgaatat gctgggcgcg ttcggcggat gccggatggt
    24841 cgtcaaacat tgagctttgg cggccttctt ccagtttcgc cagtttttca aagctggtgg
    24901 caagacctgc cgggctgatg ccgcgttggc gcagaagatc gtaagaataa tcatcggctt
    24961 ctgcttcctg gcgctgggag aattgcgaat tgactaattt ctcgcccaga tcaccaagtt
    25021 gtgattgaga taaactgccg acaatcccgc ccgcagaggc cgcagctact cgcacggcat
    25081 ttgtaccaag cgccacctgc atccctttct tcacatggcc taacgccacg tgccccatct
    25141 cgtgaccgat caccgcttcg acttcgttat ccgtcatcat atccatcagc ccgctataga
    25201 cgcggataca gccgttagcc attgcaaagg cgttcacatc cttcgccata tacactttgt
    25261 aattcaccgg ctgaccgttg atattgttgc ctagcgcatt ggcaatagtt gtcagacgtt
    25321 tagcgtattc gctattggct ggcgcaatcg tcgccttgct gtccatctcc tgacatgcct
    25381 gatcgctcag ggttttcacc tgcgcatcac tcaaactgta agcctgaaaa gcttccgctc
    25441 ctgatgagag cagtccgttg gagtccatat tctggcaacc agtcagtacc gttgccacgc
    25501 tcattgctac caataaggcg cgaattttca tgttttctct tccgcacaag gtcaggatta
    25561 ttctaaaaat gcgccgtttg caggtgaatc gacgctcagt ctcagtataa ggaaaagcgc
    25621 agcggacggg cgagtagatt gcgcaacatg cgagcatgat ccagagattt ctgaagcggc
    25681 aaaaggatgt tccatgtaca tgacgcgcgg cttgcggtaa attgttggca aattttccgg
    25741 cgtagcccaa aacgcgctgt cgttaagggc gtgcccttca tcatccgatc tggagtcaaa
    25801 atgtcctcac gtaaagagct tgccaatgct attcgtgcgc tgagcatgga cgcagtacag
    25861 aaagccaaat ccggtcaccc gggtgcccct atgggtatgg ctgacattgc cgaagtcctg
    25921 tggcgtgatt tcctgaaaca caacccgcag aatccgtcct gggctgaccg tgaccgcttc
    25981 gtgctgtcca acggccacgg ctccatgctg atctacagcc tgctgcacct caccggttac
    26041 gatctgccga tggaagaact gaaaaacttc cgtcagctgc actctaaaac tccgggccac
    26101 ccggaagtgg gttacaccgc tggtgtggaa accaccaccg gtccgctggg tcagggtatt
    26161 gccaacgcag tcggtatggc gattgcagaa aaaacgctgg cggcgcagtt taaccgtccg
    26221 ggccacgaca ttgtcgacca ctacacctac gccttcatgg gcgacggctg catgatggaa
    26281 ggcatctccc acgaagtttg ctctctggcg ggtacgctga agctgggtaa actgattgcg
    26341 ttctacgatg acaacggtat ctctattgat ggtcacgttg aaggctggtt caccgacgac
    26401 accgcaatgc gtttcgaagc ttacggctgg cacgttattc gcgacatcga cggtcatgac
    26461 gcggcatcca tcaaacgcgc agtagaagaa gcgcgcgcag tgactgacaa accgtccctg
    26521 ctgatgtgca aaaccatcat cggtttcggt tccccgaaca aagccggtac tcacgactcc
    26581 cacggtgcgc ctctgggcga cgctgaaatt gccctgaccc gcgaacagct gggctggaaa
    26641 tatgcaccgt tcgaaatccc gtctgaaatc tatgctcagt gggatgcgaa agaagcaggc
    26701 caggcgaaag aatccgcatg gaacgagaaa ttcgctgctt acgcgaaagc ttatccgcag
    26761 gaagccgctg aatttacccg ccgtatgaaa ggcgaaatgc cgtctgactt cgacgcgaaa
    26821 gcaaaagagt tcattgctaa actgcaggct aacccggcga aaatcgccag ccgtaaagcg
    26881 tctcagaatg ctatcgaagc tttcggtccg ctgttgccgg aattcctcgg cggttctgct
    26941 gacctggcac cgtctaacct gaccctgtgg tctggttcta aagcaatcaa cgaagatgct
    27001 gcgggtaact acatccacta cggtgttcgc gagttcggta tgaccgcgat tgctaacggt
    27061 atctccctgc acggtggttt cctgccgtac acctccacct tcctgatgtt cgtggaatac
    27121 gcacgtaacg ccgtacgtat ggctgcgctg atgaaacagc gtcaggtgat ggtttacacc
    27181 cacgactcca tcggtctggg cgaagatggc ccgactcacc agccggtaga gcaggtcgct
    27241 tctctgcgcg taaccccgaa catgtctaca tggcgtccgt gtgaccaggt tgaatccgcg
    27301 gtcgcgtgga aatacggtgt tgagcgtcag gacggcccga ccgcactgat cctctcccgt
    27361 cagaacctgg cgcagcagga acgaactgaa gagcaactgg caaacatcgc gcgcggtggt
    27421 tatgtgctga aagactgcgc cggtcagccg gaactgattt tcatcgctac cggttcagaa
    27481 gttgaactgg ctgttgctgc ctacgaaaaa ctgactgccg aaggcgtgaa agcgcgcgtg
    27541 gtgtccatgc cgtctaccga cgcatttgac aagcaggatg ctgcttaccg tgaatccgta
    27601 ctgccgaaag cggttactgc acgcgttgcg gtagaagcgg gtattgctga ctactggtac
    27661 aagtatgttg gcctgaatgg cgctatcatc ggtatgacca ccttcggtga gtcagctccg
    27721 gcagagttgc tgttcgaaga gttcggcttc accgtcgaca acgtcgttgc gaaagcaaaa
    27781 gaactgctgt aattagcatt tcgggtaaaa aggtcgcttc ggcgaccttt tttattacct
    27841 tgatatgtcc gtttgcggac aagcaataga taaagcgtgt tgcagatcac aaatatttat
    27901 atgcaataaa tatcaattat gtaatatgca tcacgatatg cgtattgaca tttgttgtta
    27961 tatctataac tcaatgttat ataagaaatt aataattcac tgttttcaaa acaccggttt
    28021 ccctgctcaa ttgctttcat taaaccgcac gagtatttta tttttaccgc cggacggtac
    28081 cctaaaaata aaataaggat aatttatgcg gcttagtgac tattttccag aatcatcaat
    28141 ctcagttata cattcagcaa aagattggca ggaagctatc gatttctcga tggtatcatt
    28201 gctggataaa aactatatca gcgagaatta cattcaggca attaaagatt ccaccattaa
    28261 caatggccct tattatattc tcgcaccagg cgtggcaatg cctcatgcgc gaccggaatg
    28321 tggggcgctt aaaaccggga tgtctttgac attacttgaa caaggtgttt attttccggg
    28381 gaatgacgaa ccaattaaat tactcatcgg actctctgct gccgatgccg attcgcacat
    28441 tggcgctatt caggcgttaa gtgaattact gtgcgaagaa gaaatactcg aacaactctt
    28501 aacagcatca tcagaaaaac aattagcgga cattatcagc cacagataat tactctctcc
    28561 tctacaggat aatattatgg aaaacaagtc tgctcgtgca aaggtccagg cttttggggg
    28621 ctttttgact gcaatggtca tccccaatat tggtgctttt attgcctggg gttttattac
    28681 tgcgttattt attcccaccg gttggctgcc taacgaacat ttcgccaaaa ttgtcggccc
    28741 gatgattacc tatttattgc ccgtgatgat tggttctaca ggtggtcatc tggtcggcgg
    28801 taaacgcggg gcggtcatgg gcggaatagg tactattggt gtgatcgttg gcgcagagat
    28861 cccgatgttc cttggctcaa tgatcatggg gccgctcggt gggttggtca taaaatatgt
    28921 cgataaggca ctggaaaaac gcatacctgc cggttttgag atggttatca ataacttctc
    28981 attaggtatc gcggggatgc tcctttgtct gctgggtttt gaagtgatcg gcccggcggt
    29041 gttaattgcc aatactttcg tcaaagagtg tatcgaggcg ctggtacatg cgggttatct
    29101 gcctctgctg tcagtcatca atgaaccggc gaaagtgctt ttccttaata atgcgatcga
    29161 tcagggcgtc tattatccgc tgggaatgca acaggcttcg gttaacggta aatccatctt
    29221 ctttatggtg gcctctaacc caggtccggg cctggggctg ctgctggcgt ttaccttgtt
    29281 tggtaaaggg atgagtaaac gttctgcgcc cggggcgatg attattcact tcctcggtgg
    29341 gatccacgaa ctgtatttcc catatgtgct gatgaagccg ctgactatta ttgccatgat
    29401 tgcgggcggt atgtctggta cctggatgtt taacttactg gacggtggtc tggtggctgg
    29461 cccaagtctg gggtctatct ttgcttacct ggcactgacg ccgaaaggct cgttcctggc
    29521 gacaattgcc ggtgttacgg taggtaccct ggtgtccttt gctattactt cgctgatact
    29581 gaagatggaa aaaacggtgg aaacggagag cgaagatgag tttgctcagt caaccaatgc
    29641 ggttaaggcg atgaaacaag agggtgcatt ctcgttaagc agggttaagc gtatcgcctt
    29701 tgtttgcgat acggggatgg gctccagtgc gatgggcgcg accaccttcc gtaaacgcct
    29761 ggaaaaagcg gggctggcaa tagaagtaaa acattacgcg atagaaaacg tgcctgcgga
    29821 tgccgatatc gtcgtcactc acgccagtct ggaagggcgc gtgaaacgtg tgacggataa
    29881 accgctgata ttgattaata actatattgg cgatccaaaa ctcgacactt tatttaatca
    29941 attaaccgcc gaacataaac actgattaca gaggtaaaaa tgaaaaccaa agttgctgct
    30001 atttatggca agcgggatgt ccgtctgcgc gaatttgaac tgccagaaat taccgataat
    30061 gaactgttag tgagtgtaat ttctgacagc gtctgtttat cgacctggaa agcggcgtta
    30121 ctcggtagtg aacataaacg cgtacccgac gatttagaaa atcatccggt cattaccggg
    30181 catgaatgtg ccggggttat tgtcgaagtg ggtaaaaatc tcactggcaa atataaaaaa
    30241 ggccagcgtt ttgtattgca accggcgatg gggttaccaa gcggatattc agcaggctac
    30301 agctacgaat attttggcgg taacgccacc tatatgatta ttcccgaaat cgccattaat
    30361 ttgggctgcg tattaccgta tcacggctct tattttgctg cggcgtcgct ggtagagcct
    30421 atgtgctgca ttattggtgc ttatcatgcc aattatcaca ccacgcaata tgtttatgag
    30481 catcgcatgg gcgtcaaacc tggcggcaat attgcactgc tggcgtgtgc gggtccgatg
    30541 ggcattggcg ctatcgatta cgccattaac ggtggcatac aaccgtcacg ggtggtggtg
    30601 gtcgatatcg acgacaaacg cctggcgcag gtgcagaagc tgctgccggt ggatctggcg
    30661 gccagtaaag gcattgagct ggtgtatgtg aataccaaag ggatgagcga tccggtccag
    30721 acgctgcggg cgctgacagg agatgtcggg ttcgatgaca tttttgttta tgcggcggtg
    30781 cctgctgtcg ttgagatggc tgacgaatta ctggcggaag atggctgtct gaacttcttt
    30841 gccgggccga cggataaaaa cttcaaagtg ccgtttaatt tctacaacgt ccattacaac
    30901 agcacgcacg tagtcggtac atccggcggt tcaacggacg acatgaaaga ggcgattgcg
    30961 ttaagcgcca cggggcagtt gcagccgtcc tttatggtca cgcatatcgg tgggctggat
    31021 gcggtgccag ataccgtgct caatctgccg gatatccctg gcggtaaaaa actcatttat
    31081 aacggcgtga ccatgccgct cactgccatt gccgattttg ccgaaaaagg caaaaccgat
    31141 ccgctattta aagagttggc gcggctggtt gaggaaacgc acggcatctg gaatgaacag
    31201 gccgagaaat atctgctggc acaatttggc attgatatcg gggaggccgc gcaatgatgt
    31261 ccctggcgtg gccattattt cgcgttacgg aacaggcagc gttggctgcc tggccgcaaa
    31321 ccggatgtgg cgacaaaaat aaaattgatg gcctggcggt caccgcgatg cgccaggcat
    31381 taaacgacgt cgcttttcgt ggacgagtgg ttatcggcga aggagaaatt gaccatgcgc
    31441 cgatgctgtg gattggcgaa gaggtgggca aaggcgatgg gccagaagtc gatatcgcgg
    31501 ttgatcccat tgaaggcacg cggatggtgg cgatggggca gagcaatgcg ctggcggtca
    31561 tggctttcgc ccctcgggat agcctgttac atgcgcccga tatgtatatg aaaaagctgg
    31621 ttgttaatcg actggctgcc ggggtgattg atctgtcttt gcctctggcg gacaacttgc
    31681 gtaacgtggc gcgggcgtta ggtaaaccgc tggacaagct gcgcatggtt acgctggata
    31741 aaccgcgcct gagtgccgcg attgaggaag caacacagct gggcgtgaag gtttttgccc
    31801 tgccggatgg cgatgtcgcc gccagcgtgc tgacctgctg gcaggataat ccttacgatg
    31861 tgatgtacac catcggcggt gcgccagaag gcgtgatttc tgcctgtgcc gttaaagcat
    31921 taggcgggga tatgcaggcc gagctgattg acttttgtca ggctaaaggg gattacacgg
    31981 aaaatcggca gattgcagag caggagagca agcgttgcaa ggcaatgggc gttgacgtta
    32041 accgtgtgta ctcgctcgat gaactggtga gggggaacga tatcctcttt agcgctacgg
    32101 gcgtgacggg cggcgagttg gtgaacggta tccaacagac ggcgaatggg gtgcggacgc
    32161 agacattact gatcggcggc gcggaccaaa cgtgtaatat aatagactcc ctgcattgat
    32221 ggtgatctat cggaagacca atggcgaagc tgacagaaga tgatgtgctt gagcaactgg
    32281 atgcacagga caatttattt tcatttatga aaactgcgca ttctattttg ctccagggga
    32341 tacgccagtt tctgccgtcg ctgtttgtcg ataacgatga agagatcgtg gaatatgcag
    32401 tgaagccgtt actcgcccaa agcggcccgc ttgacgatat tgatgttgcg ctgcgtttga
    32461 tttatgcgct ggggaaaatg gataaatggc tgtacgccga tatcacgcat ttttcccagt
    32521 tctggcatta cctgaacgaa caggatgaaa cgcccggatt tgccgatgac atgacctggg
    32581 attttatcag caacgtcaat agcataaccc gcaatgcgat gctctatgac gcgttgaaag
    32641 cgatgaagtt cgccgatttc gccgtctggt cagaggcgcg ttttagcggg atggtcaaaa
    32701 cggcgctgac gctggcagta acgacaatct taaaggaatt aacgccgtga aaattgaatt
    32761 aacggtgaat gggctgaaga tacaggcaca gtaccagaac gaagagattg aaaatgtaca
    32821 taaaccgttg ctgcgtatgc tggcggcctt acagacggta aatccgcagc ggcgtacggt
    32881 ggtttttctt tgcgctccgc cggggacggg taaatctacc ctaaccacct tctgggaata
    32941 tctcgcgcaa caagacccgg agctgcccgc tattcagacg ctcccgatgg atggttttca
    33001 ccattacaat agctggctgg acgcgcatca attgcgcccc ttcaaaggcg caccagagac
    33061 atttgacgtt gcgaaactgg cggaaaatct gcgccaggtg gtggaagggg attgtacgtg
    33121 gccgcagtac gatcgacaaa agcatgatcc tgttgaagat gcgttgcacg ttaccgcacc
    33181 actcgtcatc gtcgaaggaa actggttgtt gctggacgac gagaagtggt gccagcttgc
    33241 gcaattttgt gatttctcga tctttatcaa cgcgccagct actgcgttgc gggagcgtct
    33301 ggtggggcgc aagctggcgg gaggggtatc gctggcagat gcagaagcct tttatgaccg
    33361 taccgacggg ccgaatgttc gccgggtgct ggaagagagt ctgcctgcaa atttgacctt
    33421 aatgatgacc gctacgggtg aatatcgtct ggtggattaa cgttcctgat tacaccatct
    33481 tccagtcgca ccacacgaga gaaatgacgc cgggtaaatg cggcgtcatg actgattgct
    33541 accacgctcg tgcctcgctg gcggcacttc tccagccagc tttcaaacac gctcaaccaa
    33601 ttttcgtcaa aatcccgact cggctcgtcc agcagtaata gtggcggaga gagtgcttcc
    33661 aggcaggcga cggcgaccat ccgtcgctgc gcactatgca gatccaacgg gtgcgagttg
    33721 gcagtgtctg ctaactgaca acattgcagg gcagcatggg tacgttgagt gatttcatcc
    33781 gccgggcatt tttgcagttt caaaccaaat gcgatctcgt cagcgacggt gctgtgaaaa
    33841 agttggtttt ccgcttcctg aaacagtacg ccaacctttg ccgcgcgctg gcggtttttc
    33901 aggtttttca tcgcctgttg ttgcagcata accgtaccgg ctgtgggcgt aagaagacct
    33961 gccattactc gtaacagcgt cgatttccct gcgccattgt caccggtcag cgccaaccat
    34021 tcaccttgtt tgagttgcag agaaatgtcg caaagacaat ccgttgccgc gccaggccag
    34081 cgataagata tctgatttaa cgttaacata gtggctggag cgctccgttt tgcaattgcc
    34141 acgcttgctg gcagtagttc aggaaaggtg tgcgatgacg ttcaaaaaga ataatcagcg
    34201 aaccacgttc aaacgcccag tgttgtaagc gctgcaacag catttcgctg gcctgcggcg
    34261 tcaggcggct aaaggcttca tcaagaatta agagctttgg ctgcatcgcg atggcgcagg
    34321 cgatgaccac gcgctgtgtc tctccaccgg agagtgttgc cgggtgacga tggcgcaacg
    34381 gctggcactc ggtcagagtc agggcggcat caatccgcgc cataatctct gcttcagcaa
    34441 gacacagatt ttctggccca aaggcaactt cttcttccac gctaaaggta cagccggaga
    34501 gctgcaaata gggcgattgc tggacgagct ggatggtggc ggattgttca ttaagcggga
    34561 gatgcccaat gggcgtaccg aggagcgtcc ccgtgcctgt tatctctcct ggcagaaagt
    34621 ccggatacca gcccgccatc agctgtgcca gcgtactttt gccactgccg ttgtcaccaa
    34681 agatggcgac catccccggt ttgacatagt gaaagtcata acagaacgga ggatgcgttg
    34741 agtgtgtcgg gcaataacgg aactgttcta acgtaaccat atccacgctc cgaattctgt
    34801 cagcatcagc aagatcatgg tgtaacgcgc tacgcgttgt agggtgctat cggctggtgc
    34861 ccacaacgtt gttcgtcggt tgtggatccg aaatgcccgc atatccagcg ccgcaccacg
    34921 gacagccaga tcgttaagcg cattgtgtgt tagcggaata attaacgcgg gcatcgcacg
    34981 taaacgctga taccagccct catccagcgg cacgccgcgg gcacgctgcg cttcatgaat
    35041 aatcgctaat tgccgtttta actgctcaac gaccaataac ggcccggcaa acagataagc
    35101 gacgcctggc ggcaggcgag aagcaaacag agcgcgaata aaacattgca cggggacgta
    35161 ctgcatccac aactgtgagg ttgaaacaat caccagaatc cgcaaccaga gcgtaatagc
    35221 atgcgaccac cgttctggcg agcgtggcgt gccgcttagc cattctggta gccagccacc
    35281 gtgtaccagc cacagcccgg ctcccagcga gaacatcagc cagacgacat attttgcccg
    35341 ccgccgcgtg gcctttagcg caataaggca gaaaaaggtc gccgcgctat agatcggcaa
    35401 aatggtctgc gcgggcagga taagcgtggt gcaggccgcc aatgcccaca gtgttaatga
    35461 ggtaaatgga tgcatttagc gcacggcagc cattgccgga aaatggcgcg tggtgcgaat
    35521 cggcagctgg cgcagtaaaa gccagacaat caccgctgta agaattttat cgaccaggtt
    35581 cgcgcctatc accgtaatcg ccaccgactc caccaggttt tgccccatcg agtgcatcca
    35641 ggcaacgaac aaatcggctc cgctaccggt gacaccgccg aacagcgcag tacgcagcgg
    35701 tacagcgacg accgttaccg caagcgtaat aatcacgccg ctgacaacga cttttggcag
    35761 ggtgcgaaac caacccgctc gcgccagcca accggcgacc aggccgatga ccatcgcgac
    35821 gggtgcaaat gcggcggcga tcgggtcggt cagcaatccc cagagtaaat tggtcagtaa
    35881 gccggtcagc attccgatca ccggaccaag cagtaccgcg ctaataagtg tgccgatgga
    35941 gtcgagaaat ataggtaatt tgaccatgct ggccagttgc ccgccgatca tattgatggc
    36001 gatagatata acgatcaaca ccagtgcctg actggaaaag tggctacgcg ccataagaaa
    36061 acctctttga aagtagttat ttaacggggg aaatatgcaa ctcgtcgtaa ccagaaagcg
    36121 cgcaaggttg gcggctaaac gccagttcct caaggctacc gatcaccagt tcaagcgtgg
    36181 tccgcacggt acagccgggc atcatatgac cgccaagcat cgtgccgtgt ggatcggaaa
    36241 cgcagagatg aagatgctca ccactctgtt ccagcgtgcc gtttagtgag atcacttcga
    36301 atgtaccgtt caggagcgtg gtgccttctt gcctggcata gcgcaaggcg acgtcagtca
    36361 ggctaccggt acagcctgca atccaggcgg catgaagttg atgctgctgt gcaaaagcgt
    36421 gtagctggga aaaaacttcc tgcccgggga ggaggcgcag tgcgtaaaag cgtgcggagg
    36481 aagaatatgg gtagggcaat gtcatcattg gagtactccg aaactcggac gtattgcgga
    36541 taatatcgac gctgcatcag tcatattctg atataagtca gggtttgtga cggcacaacg
    36601 aaaagatttt gctacgctta ttcgtgattc tgcaaagtgg aataaattct acaggggcgg
    36661 ggctgaaaac gtgacgtaag tcagataatt gctttctttg actggacaat cattcctttt
    36721 attccacgtt tcgcttatcc tagctgaagc gtttcagtcg attaaatgtt cgacaattaa
    36781 ccaatcagtc gcagtttgcg acaggtaagg tttccccgga cgatttgctg gattactctg
    36841 tctggcaaat ttgctcaggg aaaaccttgc aggagatcta tgaccgtacg cgtagcgata
    36901 aatggcttcg gtcgcatcgg gcgtaatgtg gttcgtgctt tgtatgaatc cggacgccgg
    36961 gcggaaatta ccgtggtggc aatcaacgaa ctggcggatg ctgcgggcat ggcgcatttg
    37021 ttgaaatatg acaccagcca tggccgtttt gcatgggaag tacgacagga acgcgatcaa
    37081 ctttttgttg gtgatgacgc catccgcgta ttgcatgaac gttcactgca atcgctcccc
    37141 tggcgtgaac ttggcgttga tgtagtcctc gactgcaccg gcgtatatgg ctcccgcgag
    37201 catggcgaag cgcatattgc cgccggggcc aaaaaagtgc tcttttcaca tcctggcagt
    37261 aacgatctcg acgcgaccgt tgtttacggc gtcaatcagg atcaacttcg tgcggaacac
    37321 cgcatcgttt ctaacgcttc ctgtaccacg aattgcataa ttcccgtcat caaattgtta
    37381 gatgatgcgt acggtattga gtccggcact gtgaccacaa ttcactccgc catgcacgat
    37441 caacaggtta ttgatgcata ccatcctgac ctgcgtcgca cccgggcagc cagccagtcg
    37501 atcattccgg tcgatactaa actggccgcc ggtatcacac gattttttcc gcaatttaac
    37561 gatcgctttg aagcgattgc ggtacgtgtg ccaaccataa atgtgacggc aatcgattta
    37621 agcgtgacgg tgaagaaacc tgtaaaagcc aatgaagtca acctgttgct gcaaaaagca
    37681 gcacaaggtg catttcatgg tatagttgac tatacggaat tgccgttggt ctctgtagat
    37741 tttaaccacg atccgcacag tgccattgtc gatggcaccc aaacccgggt cagtggcgca
    37801 cacctgatca aaacgttggt ctggtgcgat aacgaatggg gctttgctaa ccgaatgctc
    37861 gacacgacgt tagctatggc tactgttgct ttcaggtaag acgcaagcag cgtctgcaaa
    37921 acttttagaa tcaacgagag gattcaccat gtctgtaatt aagatgaccg atctggatct
    37981 tgctgggaaa cgtgtattta tccgtgcgga tctgaacgta ccagtaaaag acgggaaagt
    38041 aaccagcgac gcgcgtatcc gtgcttctct gccgaccatc gaactggccc tgaaacaagg
    38101 cgcaaaagtg atggtaactt cccacctggg tcgtcctacc gaaggcgagt acaacgaaga
    38161 attctctctg ctgccggttg ttaactacct gaaagacaaa ctgtctaacc cggttcgtct
    38221 ggttaaagat tacctcgacg gcgttgacgt tgctgaaggt gaactggttg ttctggaaaa
    38281 cgttcgcttc aacaaaggcg agaagaaaga cgacgaaacc ctgtccaaaa aatacgctgc
    38341 actgtgtgac gtgttcgtaa tggacgcatt cggtactgct caccgcgcgc aggcttctac
    38401 tcacggtatc ggtaaattcg ctgacgttgc gtgcgcaggc ccgctgctgg cagctgaact
    38461 ggacgcgctg ggtaaagcac tgaaagaacc tgctcgcccg atggtggcta tcgttggtgg
    38521 ttctaaagta tctaccaaac tgaccgtttt ggactccctg tctaaaatcg ctgaccagct
    38581 gattgttggt ggtggtatcg ctaacacctt tatcgcggca caaggccacg atgtgggtaa
    38641 atccctgtac gaagctgacc tggttgacga agctaaacgt ctgctgacca cctgcaacat
    38701 cccggttccg tctgatgttc gcgtagcaac cgagttctct gaaactgcac cggctaccct
    38761 gaaatctgtt aacgatgtga aagctgacga gcagatcctg gatatcggtg atgcttccgc
    38821 tcaggaactg gctgaaatcc tgaagaatgc gaaaaccatt ctgtggaacg gtccggttgg
    38881 cgtgttcgaa ttcccgaact tccgcaaagg tactgaaatc gtggctaacg ctatcgcaga
    38941 cagcgaagcg ttctccatcg ctggcggcgg cgacactctg gcagcaatcg acctgttcgg
    39001 cattgctgac aaaatctcct acatctccac tggcggcggc gcattcctcg aattcgtgga
    39061 aggtaaagta ctgcctgcag tagcgatgct cgaagagcgc gctaagaagt aaaaaatcac
    39121 agggcaggga aacctgccct tgtttcagcg cgcttttaga gcacgcattt tttcatactc
    39181 taaataattc gagttgcagg aaggcgacaa gagagtgaat ccccaggagc ttacataagt
    39241 aagtgactgg ggtgagcgaa cgcagacgca gcacatgcaa cttgaagtat gatgagtata
    39301 aggcccgacg atacaggaca agagacatgt ctaagatttt tgatttcgta aaacctggcg
    39361 taatcactgg tgatgacgta cagaaagttt tccaggtagc aaaagaaaac aacttcgcac
    39421 tgccagcagt aaactgcgtc ggtactgact ccatcaacgc cgtactggaa actgctgcta
    39481 aagttaaagc gccggttatc gttcagttct ccaacggtgg tgcttccttt atcgctggta
    39541 aaggcgtgaa atctgacgtt ccgcagggtg ctgctatcct gggcgcgatc tctggtgcgc
    39601 atcacgttca ccagatggct gaacattatg gtgttccggt tatcctgcac actgaccact
    39661 gcgcgaagaa actgctgccg tggatcgacg gtctgctgga cgcgggtgaa aaacacttcg
    39721 cagctaccgg taagccgctg ttctcttctc acatgatcga cctgtctgaa gaatctctgc
    39781 aagagaacat cgaaatctgc tctaaatacc tggagcgtat gtccaaaatc ggcatgactc
    39841 tggaaatcga actgggttgc accggtggtg aagaagacgg cgtggacaac agccacatgg
    39901 acgcttctgc actgtacacc cagccggaag acgttgatta cgcatacacc gagctgagca
    39961 aaatcagccc gcgtttcacc atcgctgcgt ccttcggtaa cgtacacggt gtttacaagc
    40021 cgggtaacgt ggttctgact ccgaccatcc tgcgtgattc tcaggaatat gtttctaaga
    40081 aacacaacct gccgcacaac agcctgagct tcgtattcca cggtggttcc ggttctactg
    40141 ctcaggaaat caaagactcc gtaagctacg gcgtagtgaa aatgaacatc gataccgata
    40201 cccaatgggc aacctgggaa ggcgttctga actactacaa agcgaacgaa gcttatctgc
    40261 agggtcagct gggtaacccg aaaggcgaag atcagccgaa caagaaatac tacgatccgc
    40321 gcgtatggct gcgtgccggt cagacttcga tgatcgctcg tctggaaaaa gcattccagg
    40381 aactgaacgc gatcgacgtt ctgtaagata ttcctttctg cttatctcaa ggcccgctct
    40441 gcgggtcttt ttttcgccaa aagcaaaatt gcctgatgcg ctacgcttat caggcctaca
    40501 cgtatcctgc aatatattga atttgcaggt ttttgtaggc cggataaggc gttcacgccg
    40561 catccggcat gacaaagcgc acattgatat ctgtctgagc cccgctctgc ggggattttt
    40621 tcgccaaaag caaggtgatt cagatgagaa atctgtgacc tatttggcaa aattatgctt
    40681 tattgtttac ccttgtcaga ctgcccgtca taaggcggcg gagtgtattt ctccattttg
    40741 agtcagttga aaaggaatat tgaatggaag atttgaatgt tgtcgatagc ataaacggcg
    40801 cgggaagctg gctggtagct aaccaggcgc tgctgctaag ttatgcagta aacatcgtgg
    40861 cggcactcgc gatcatcatc gttggtttga ttatcgcgcg gatgatttcc aacgcggtga
    40921 atcgcctgat gatctcccgt aaaatcgatg ccactgttgc tgattttctt tctgcattag
    40981 tccgttacgg tattatcgcc tttacgctaa tcgctgccct gggacgcgtg ggtgtacaaa
    41041 cagcgtcagt cattgctgta ctcggtgccg caggcttagc tgttggtctg gctttgcagg
    41101 ggtcactttc taacctggcc gctggcgtgt tacttgtcat gttccgaccg ttccgtgccg
    41161 gagaatatgt tgacctcggc ggcgtagccg gtactgtgct gagtgtgcag attttctcca
    41221 ccaccatgcg tactgcagac ggtaaaatta tcgttattcc gaacggtaaa attattgccg
    41281 gaaatattat taacttctcc cgcgagccag ttcgccgtaa cgaatttatt attggcgtgg
    41341 cgtatgattc cgatatcgat caggttaagc agatcctgac caatattatc cagtctgaag
    41401 atcgcatttt gaaagatcgc gaaatgactg tgcgcctgaa cgaacttggt gcatcgtcga
    41461 ttaatttcgt ggtccgcgtc tggagcaaca gcggcgatct gcaaaacgtg tactgggatg
    41521 tgctggagcg tattaaacgt gaatttgatg ccgccggtat cagcttcccg tacccgcaaa
    41581 tggatgtgaa ctttaagcgg gtgaaagaag acaaagctgc gtaatcaacg ctgaggccag
    41641 ataatactct ctggcctctc tcttattagt tattctgatt gccaattaat attatcaatt
    41701 tccgctaata acaatcccgc gatatagtct ctgcatcaga tacttaattc ggaatatcca
    41761 acgtgttttc ttattacttt caaggtcttg atcttggggc agctatgatt ctgccgctcg
    41821 gcccacaaaa tgcttttgtg atgaatcagg gcattcgtcg tcagtaccac attatgattg
    41881 ccttactttg cgctatcagc gatttggtcc tgatttgcgc ggggattttt ggtggtagcg
    41941 cgttattgat gcagtcgccg tggttgctgg cgctggtcac ctggggcggc gtagtcttct
    42001 tgctctggta tggttttggc gcttttaaaa cagcgatgag tagtaatatt gagttagcta
    42061 gtgccgaagt cctgaagcaa ggcagatgga aaattatcgc caccatgttg gcagtgacct
    42121 ggctgaatcc gcatgtttac ctggatactt ttgttgtact gggcagcctt ggcgggcagc
    42181 ttgacgtcga accaaacgct cgggacaatt agcgcctctt tcctgtggtt ctttggtctg
    42241 gctattctcg cagcctggct ggcaccgcgc ctgcgcacgg caaaatcaca gcgcattatc
    42301 aatctggtag tgggatgtgt catgtggttt atagccttgc agctggcgag agacggtatt
    42361 gctcatgcac aagccttgtt cagttaggcg ctatctgatg gaaaaataaa acagaggcgc
    42421 taagcttgcc tccagaggtc ctgaattttg ggcaagtcaa ttaacacgga gagactaacg
    42481 tgaagttcaa agttatcgcc ctagcggcat taatgggtat tagcgggatg gcagcgcagg
    42541 ctaacgaatt gccggatgga ccgcatattg tcacctccgg tacggcaagt gtggatgcgg
    42601 tgccagacat tgccactctt gcgattgaag ttaacgtggc cgcgaaggat gccgctacag
    42661 ccaagaaaca ggcagatgag cgcgtcgcac aatacatttc cttccttgaa ctcaatcaga
    42721 tcgcgaaaaa agatatcagc tcagcgaatt tacgcaccca gccagattat gattatcagg
    42781 atggtaaaag tatcctgaaa ggctaccgcg ctgtgagaac ggtggaagtc acgctccgtc
    42841 agttagacaa actgaattcc ttgctggatg gcgcgctgaa ggcgggtctt aacgaaattc
    42901 gttcagtgtc gctgggcgtg gcgcagccgg atgcctataa agacaaagcg cgtaaggcag
    42961 cgattgataa cgcgattcat caggcgcagg aactggcgaa cggctttcat cgtaaactgg
    43021 ggccggtata tagcgtgcgc taccatgttt ccaactatca gcccagccca atggtgcgga
    43081 tgatgaaagc cgatgccgcg ccggtgtctg cccaggaaac ttacgagcag gccgctattc
    43141 agtttgatga tcaggtcgat gtggtcttcc agttagaacc tgtggatcaa caacccgcta
    43201 aaacacctgc agcacaataa tacttgtagc ccgacgtatt cgtcgggcta atgcctttac
    43261 ccgatattgc ctcctttttc tgtaattttc tgtaaaacca tgacgtaatc acctatcttt
    43321 gctcgcggtt tcatcaagga taggctgact gaaacggtta agcggacaag gatgcgggg
//
LOCUS       DADMJE010000010        42376 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.010, whole genome shotgun sequence.
ACCESSION   DADMJE010000010 DADMJE010000000
VERSION     DADMJE010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 42376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 42376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..42376
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.010"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            100..639
                     /locus_tag="JN001_000546"
     CDS             100..639
                     /locus_tag="JN001_000546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051879.1"
                     /translation="MKKVFLCAILASLSYPAIASSLQDQLSAVAEAEQQGKNEEQRQH
                     DEWVAERNREIQQEKQRRANAQVAANKRAATAAANKKARQDKLDAEASADKKRDQSYE
                     DELRSLEIQKQKLALAKEEARVKRENEFIDQELKHKAAQTDVVQSEADANRNMTEGGR
                     DLMKSVGKAEENKSDSWFN"
     gene            complement(734..2311)
                     /gene="guaA"
                     /locus_tag="JN001_000547"
     CDS             complement(734..2311)
                     /gene="guaA"
                     /locus_tag="JN001_000547"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HAY9051880.1"
                     /translation="MTENIHKHRILILDFGSQYTQLVARRVRELGVYCELWAWDVTEA
                     QIRDFNPSGIILSGGPESTTEENSPRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEA
                     SNEREFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFVTVAST
                     ESCPFAIMANEEKRFYGVQFHPEVTHTRQGMHMLERFVRDICQCEALWTPAKIIDDAV
                     ARIREQVGDDKVILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDM
                     FGDHFGLNIVHVPAEDRFLSALAGENDPEAKRKIIGRVFVEVFDEEALKLEDVKWLAQ
                     GTIYPDVIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLELG
                     LPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIFIEELRKADLYNKVSQAFTV
                     FLPVRSVGVMGDGRKYDWVVSLRAVETIDFMTAHWAHLPYDFLGRVSNRIINEVNGIS
                     RVVYDISGKPPATIEWE"
     gene            complement(2380..3846)
                     /gene="guaB"
                     /locus_tag="JN001_000548"
     CDS             complement(2380..3846)
                     /gene="guaB"
                     /locus_tag="JN001_000548"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004159092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HAY9051881.1"
                     /translation="MLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPM
                     LSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVVTDPQTVLP
                     TTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVRFVTDLNQPVSVYMTPKERLV
                     TVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKAERKPNACKDEQGRL
                     RVGAAVGAGAGNEERVDALVAAGVDVLLIDSSHGHSEGVLQRIRETRAKYPDLQIIGG
                     NVATAAGARALAEAGCSAVKVGIGPGSICTTRIVTGVGVPQITAVADAVEALEGTGIP
                     VIADGGIRFSGDIAKAIAAGASAVMVGSMLAGTEESPGEIELYQGRSYKSYRGMGSLG
                     AMSKGSSDRYFQSDNAADKLVPEGIEGRVAYKGRLKEIIHQQMGGLRSCMGLTGCGTI
                     DELRTKAEFVRISGAGIQESHVHDVTITKESPNYRLGS"
     gene            4008..5378
                     /gene="xseA"
                     /locus_tag="JN001_000549"
     CDS             4008..5378
                     /gene="xseA"
                     /locus_tag="JN001_000549"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HAY9051882.1"
                     /translation="MLPSQSPAIFTVSRLNQTVRLLLEHEMGQVWISGEISNFTQPAS
                     GHWYFTLKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESM
                     QPAGEGLLQQKYEQLKAKLQAEGLFDQQYKKPLPSPAHCVGVITSKTGAALHDILHVL
                     KRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANQRNECDVLIVGRGGGSLEDLWSFND
                     ERVARAIFASRIPVVSAVGHETDVTIADFVADLRAPTPSAAAEVVSRNQQELLRQVQS
                     TRQRLEMAMDYYLANRTRRFTQIHHRLQQQHPQLRLARQQTMLERLQKRMSFALENQL
                     KRTGQQQQRLTQRLNQQNPQPKIHRAQTRIQQLEYRLAETLRVQLSATRERFGNAVTH
                     LEAVSPLSTLARGYSVTTATDGNVLKKVKQVKAGEMLTTRLEDGWIESEVKNIQPVKK
                     SRKKVH"
     gene            complement(5375..5590)
                     /locus_tag="JN001_000550"
     CDS             complement(5375..5590)
                     /locus_tag="JN001_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417005.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051883.1"
                     /translation="MELHCPQCQHVLDQDNGHARCPSCGEIIEMKALCPDCHQPLQVL
                     KACGAVDYFCQHGHGLISKKRVEFVLA"
     gene            complement(5659..7131)
                     /gene="der"
                     /locus_tag="JN001_000551"
     CDS             complement(5659..7131)
                     /gene="der"
                     /locus_tag="JN001_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417006.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HAY9051884.1"
                     /translation="MVPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGR
                     AEIEGREFICIDTGGIDGTEDGVETRMAEQSLLAIEEADVVLFMVDARAGLMPADEAI
                     AKHLRSREKPTFLVANKTDGLDPDQAVVDFYSLGLGEIYPIAASHGRGVLSLLEHVLL
                     PWMEDLAPQEEVDEDAEYWAQFEVEENGEEEEEDDFDPQSLPIKLAIVGRPNVGKSTL
                     TNRILGEERVVVYDMPGTTRDSIYIPMERDGREYVLIDTAGVRKRGKITDAVEKFSVI
                     KTLQAIEDANVVMLVIDAREGISDQDLSLLGFILNSGRSLVIVVNKWDGLSQEVKEQV
                     KETLDFRLGFIDFARVHFISALHGSGVGNLFESVREAYDSSTRRVGTSMLTRIMTMAV
                     EDHQPPLVRGRRVKLKYAHAGGYNPPIVVIHGNQVKDLPDSYKRYLMNYFRKSLDVMG
                     SPIRIQFKEGENPYANKRNTLTPTQMRKRKRLMKHIKKNK"
     gene            complement(7249..8427)
                     /gene="bamB"
                     /locus_tag="JN001_000552"
     CDS             complement(7249..8427)
                     /gene="bamB"
                     /locus_tag="JN001_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamB"
                     /protein_id="HAY9051885.1"
                     /translation="MQLRKLLLPGLLSVTLLSGCSLFNSEEDVVKMSPLPTVENQFTP
                     TTAWSTSVGSGIGNFYSNLHPALADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDG
                     WFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDG
                     LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPATAFGAAVVGGDNGRVSA
                     VLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQ
                     IMWKRELGSVNDFIVDGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLYD
                     GNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAADGKLLIQAKDGTVYSITR
                     "
     gene            complement(8438..9058)
                     /locus_tag="JN001_000553"
     CDS             complement(8438..9058)
                     /locus_tag="JN001_000553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfgM family protein"
                     /protein_id="HAY9051886.1"
                     /translation="MEIYENENDQVEAVKRFFAENGKALAVGVILGVGALIGWRYWNS
                     HQVDSARSASLAYQNAVTAVSEGKPDSIPAAEKFAAENKNTYGALASLELAQQFVDKN
                     ELEKAAAQLQQGLADTSDENLKAVINLRLARVQVQLKQADAALKTLDTIKGEGWAAIV
                     ADLRGEALLSKGDKQGARSAWEAGVKSDVTPALSEMMQMKINNLSI"
     gene            complement(9076..10350)
                     /gene="hisS"
                     /locus_tag="JN001_000554"
     CDS             complement(9076..10350)
                     /gene="hisS"
                     /locus_tag="JN001_000554"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HAY9051887.1"
                     /translation="MAKNIQAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLP
                     IVEQTPLFKRAIGEVTDVVEKEMYTFEDLNGDSLTLRPEGTAGCVRAGIEHGLLYNQE
                     QRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH
                     VTLELNSIGSLEARANYRDALVAFLEQHKEKLDEDCKRRMYTNPLRVLDSKNPEVQAL
                     LNDAPALGDYLDEESREHFAGLCKLLESAGIAYTVNQRLVRGLDYYNRTVFEWVTNSL
                     GSQGTVCAGGRYDGLVEQLGGRATPAVGFAMGLERLVLLVQAVNPEFKADPIVDIYLV
                     ASGADTQSAAMALAERLRDELQGVKLMTNHGGGNFKKQFARADKWGARVAVVLGESEV
                     TNGTAVVKDLRSGEQTAVAQDSVAAHLRTLLG"
     gene            complement(10461..11579)
                     /gene="ispG"
                     /locus_tag="JN001_000555"
                     /gene_synonym="gcpE"
     CDS             complement(10461..11579)
                     /gene="ispG"
                     /locus_tag="JN001_000555"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HAY9051888.1"
                     /translation="MHNQAPIQRRKSTRIYVGNVPIGDGAPIAVQSMTNTRTTDVEAT
                     VNQIKALERVGADIVRVSVPTMDAAEAFKLIKQRVNVPLVADIHFDYRIALKVAEYGV
                     DCLRINPGNIGNEERIRMVVDCARDKNIPIRIGVNAGSLEKDLQEKYGEPTPQALLES
                     AMRHVDHLDRLNFDQFKVSVKASDVFLAVESYRLLAKQIDQPLHLGITEAGGARSGAV
                     KSAIGLGLLLSEGIGDTLRVSLAADPVEEIKVGFDILKSLRIRSRGINFIACPTCSRQ
                     EFDVIGTVNALEQRLEDIITPMDVSIIGCVVNGPGEALVSTLGVTGGNKKSGLYEDGV
                     RKDRLDNNDMIDQLEARIRAKASQLDEARRIDVQQVEK"
     gene            complement(11606..12619)
                     /gene="rodZ"
                     /locus_tag="JN001_000556"
     CDS             complement(11606..12619)
                     /gene="rodZ"
                     /locus_tag="JN001_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytoskeleton protein RodZ"
                     /protein_id="HAY9051889.1"
                     /translation="MNTEATHDQNEALTTGARLRNAREQLGLSQQAVAERLCLKVSTV
                     RDIEEDKAPADLASTFLRGYIRSYARLVHIPEEELLLGLEKQAPLRAAKVAPMQSFSL
                     GKRRKKRDGWLMTFTWLVLFVVIGLSGAWWWQDHKAQQEEITTMADQSSAELSSNSEQ
                     GQSVPLNTSTTTDPATTSTPPASVDTTATNTQTPAVTAPAPAVDPQQNAVVSPSQANV
                     DTAATPAPTAATTPDGAAPLPTDQAGVTTPVADPNALVMNFTADCWLEVTDATGKKLF
                     SGMQRKDGNLNLTGQAPYKLKIGAPAAVQIQYQGKPVDLSRFIRTNQVARLTLNAEQS
                     PAQ"
     gene            complement(12904..14058)
                     /gene="trmG/rlmN"
                     /locus_tag="JN001_000557"
     CDS             complement(12904..14058)
                     /gene="trmG/rlmN"
                     /locus_tag="JN001_000557"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA
                     large subunit methyltransferase RlmN"
                     /protein_id="HAY9051890.1"
                     /translation="MSEQLVTPENVTTKDGKINLLDLNRQQMREFFKDLGEKPFRADQ
                     VMKWMYHYCCDNFDEMTDINKVLRGKLKEVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ
                     RVETVYIPEDDRATLCVSSQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVG
                     AAKVTGQRPITNVVMMGMGEPLLNLNNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPA
                     LDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSNANQGRVT
                     IEYVMLDHVNDGTEHAHQLAELLKDTPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVL
                     MSYGFTTIVRKTRGDDIDAACGQLAGDVIDRTKRTLRKRMQGEAIDIKAV"
     gene            complement(14208..14639)
                     /gene="ndk"
                     /locus_tag="JN001_000558"
     CDS             complement(14208..14639)
                     /gene="ndk"
                     /locus_tag="JN001_000558"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HAY9051891.1"
                     /translation="MAIERTFSIIKPNAVAKNVIGNIFARFEAAGFKIVGTKMLHLTV
                     EQARGFYAEHDGKPFFDGLVEFMTSGPIVVSVLEGENAVQRHRDLLGATNPANALAGT
                     LRADYADSLTENGTHGSDSVESAAREIAYFFGEGEVCPRTR"
     gene            complement(14788..17100)
                     /gene="pbpC"
                     /locus_tag="JN001_000559"
     CDS             complement(14788..17100)
                     /gene="pbpC"
                     /locus_tag="JN001_000559"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417014.1"
                     /note="penicillin-binding protein 1C; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase PbpC"
                     /protein_id="HAY9051892.1"
                     /translation="MLRLLTKRGCWITLAAVPFLLFLAAWGADKLWPLPLHEVNPARV
                     VVAQDGTPLWRFADADGIWRYPVTIEDVSPRYLEALINYEDRWFWKHPGVNPFSVARA
                     AWQDLTSGRVISGGSTLTMQVARLLDPHPKTFGGKILQLWRALQLEWHLSKREILILY
                     LNRAPFGGTLQGIGAASWAYLGKSPANLSYSEAAMLAVLPQAPSRLRPDRWPERAEAA
                     RNKVLERMAVQGVWSREQVKESREEPIWLAPRQMPQLAPLFSRMMLGKSKSDKIVTTL
                     DAGLQRRLEELAQNWKGRLPPRSSLAMIVVDHTDMRVRGWVGSVDLNDDSRFGHVDMV
                     NAIRSPGSVLKPFVYGLALDEGLIHPASLLQDVPRRTGDYRPGNFDSGFHGPISMSEA
                     LVRSLNLPAVQVLEAYGPKRFAAKLRNVGLPLYLPNGAAPNLSLILGGAGAKLEDMAA
                     AYTAFARHGKAGKLRLQPDDPLLEWPLMSSGAAWIIRRIMADEAQPLPDSALPRVAPL
                     AWKTGTSYGYRDAWAIGVNARYVIGIWTGRPDCTPVVGQFGFASAVPLLNQVNNILLS
                     RSANLPEDPRPNSVTRGVICWPGGQSLPEGDGNCRRRLATWLLDGSQPPTLLLPEQEG
                     INGIRFPIWLDENGKRVAADCPQARQEMINVWPLPLEPWLPASERRAVRLPPASTSCP
                     PYGHYAQLPLQLTGVRDGAIIKRLPGAAEATLPLQSSGGAGERWWFLNGEPLTERGRN
                     VTLHLTDKGDYQLLVMDDVGQIATVKFVMQ"
     gene            complement(17101..22062)
                     /gene="yfhM"
                     /locus_tag="JN001_000560"
     CDS             complement(17101..22062)
                     /gene="yfhM"
                     /locus_tag="JN001_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha2-macroglobulin"
                     /protein_id="HAY9051893.1"
                     /translation="MKKLRVAACMLMLALAGCDNNDNAPTAVKKDAPSEVTKAASSEN
                     ASSAKLSVPERQKLAQQSAGKVLTLLDLSEVQLDGAATLVLTFSIPLDPDQDFSRVIH
                     VVDKKSGKVDGAWELSDNLKELRLRHLEPKRDLIVTIGKEVKALNNATFSKDYEKTIT
                     TRDIQPSVGFASRGSLLPGKVVEGLPVMALNVNNVDVNFFRVKPESLPAFISQWEYRN
                     SLANWQSDKLLQMADLVYTGRFDLNPARNTREKLLLPLGDIKPLQQAGVYLAVMNQAG
                     RYDYSNPATLFTLSDIGVSAHRYHNRLDIFTQSLENGAAQQGIEVSLLNEKGQTLTQA
                     TSDAQGHVQLENDKNAALLLARKDGQTTLLDLKLPALDLAEFNIAGAPGYSKQFFMFG
                     PRDLYRPGETVILNGLLRDADGKALPDQPIKLDVIKPDGQVLRSVVSQPENGLYHFTW
                     PLDSNAATGMWHIRANTGDNQYRMWDFHVEDFMPERMALNLTGEKTPLTPNDEVKFSV
                     VGYYLYGAPANGNTLQGQLFLRPLREAVSALPGFEFGDIAAENLSRTLDEVQLTLDDK
                     GRGEVSTESQWKETHSPLQVIFQGSLLESGGRPVTRRAEQAIWPANALPGLRPQFALK
                     SVYDYRTDSTVKQPIVDEGSNAAFDIVYSDAQGVKKAVSGLQVRLIRERRDYYWNWSE
                     DEGWQSQFDQKDLIENEQTLDLKADETGKVSFPVEWGAYRLEVKAPNEAVSSVRFWAG
                     YSWQDNSDGSGAVRPDRVTLKLDKASYRPGDTIKLHIAAPTAGKGYAMVESSEGPLWW
                     QEIDVPAQGLDLTIPVDKTWNRHDLYLSTLVVRPSDKSRSATPKRAVGVLHLPLGDEN
                     RRLDLALETPAKMRPNQPLTVKIKASTKNGEKPKQVNVLVSAVDSGVLNITDYVTPDP
                     WQAFFGQKRYGADIYDIYGQVIEGQGRLAALRFGGDGDELKRGGKPLVNHVNIVAQQA
                     LPVTLNEQGEGSVTLPIGDFNGELRVMAQAWTADDFGSNESKVIVAAPVIAELNMPRF
                     MASGDTSRLTLDITNLTDKPQKLNVALTASGLLELVSDSPAAVELAPGVRTTLFIPVR
                     ALPGYGDGEIQATISGLALPGETVADQHKQWKIGVRPAFPAQTVNYGTALQPGETWAI
                     PADGLQNFSPVTLEGQLLLSGKPPLNIARYIKELKAYPYGCLEQTASGLFPSLYTNAA
                     QLQALGIKGDSDEKRRASVDIGISRLLQMQRDNGGFALWDKNGDEEYWLTAYVMDFLV
                     RAGEQGYSVPTDAINRGNERLLRYLQDPGMMSIPYADNLKASKFAVQSYAALVLARQQ
                     KAPLGALREIWEHRADAASGLPLLQLGIALKTMGDATRGEEAIVLALKTPRNSDERIW
                     LGDYGSPLRDNALMLSLLEENKLLPDEQYTLLNTLSQQAFGERWLSTQESNALFLAAP
                     TIQDLPGKWQAQTSFSAEPLTGEKTLNSNLNSDQLATLQVRNSGDQPLWLRMDASGYP
                     QSAPLPANNVLQIERHILGTDGKSKSLDSLRSGDLVLVWLQVKASNSVPDALVVDLLP
                     AGLELENQNLANGSASLEQSGDEVQNLLNQMQQASIKHIEFRDDRFVAAVAVDEYQPV
                     TLVYLARAVTPGTYQVPQPMVESMYVPQWRATGAAEDLLIVRP"
     gene            22262..23107
                     /gene="sseA"
                     /locus_tag="JN001_000561"
     CDS             22262..23107
                     /gene="sseA"
                     /locus_tag="JN001_000561"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HAY9051894.1"
                     /translation="MSTTWFVGADWLAEHIDDPEIQIIDARMASPGQEDRNVAQEYLN
                     GHIPGAVFFDIEALSDHTSPLPHMLPRPKTFAVAMRELGVNQDKHLIVYDEGNLFSAP
                     RAWWMLRTFGVEKVSILGGGLAGWQRDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDV
                     LLASHENTAQIIDARPAARFNAEVDEPRPGLRRGHIPGALNVPWTELVREGELKTTDE
                     LDAIFFGRGVSYDKPIIVSCGSGVTAAVVLLALATLDVPNVKLYDGAWSEWGARADLP
                     VEPVK"
     gene            complement(23600..24376)
                     /gene="sseB"
                     /locus_tag="JN001_000562"
     CDS             complement(23600..24376)
                     /gene="sseB"
                     /locus_tag="JN001_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708361.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enhanced serine sensitivity protein SseB"
                     /protein_id="HAY9051895.1"
                     /translation="MSETKNELEDLLEKAATEPAHRPAFFRTLLESTVWVPGTAAQGE
                     AVVEDSALDLQHWEKEDGTSVIPFFTSLEALQQAVEDEQAFVVMPVRTLFEMTLGETL
                     FLNAKLPTGKEFMPREISLLIGEEGNPLSSQEILEGGESLILSEVAEPPAQMIDSLTT
                     LFKTIKPVKRAFICSIKENEEAQPNLFIGIEADGDIEEIIQATGSVATDTLPGDEPID
                     ICQVKKGEKGISHFITEHIVPFYERRWGGFLRDFKQNRII"
     gene            complement(24518..25801)
                     /gene="pepB"
                     /locus_tag="JN001_000563"
     CDS             complement(24518..25801)
                     /gene="pepB"
                     /locus_tag="JN001_000563"
                     /EC_number="3.4.11.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase PepB"
                     /protein_id="HAY9051896.1"
                     /translation="MTEAMKITLSTQPADARWGEKATYSINNDGITLHLNGADDLGLI
                     QRAAHKIDGLGIKHVQLSGEGWDADRCWAFWQGYKAPKGTRKVEWPDLDDAQRQELDN
                     RLMIIDWVRDTINAPAEELGPSQLAQRAVDLISNVAGDRVTYRITKGEDLREQGYMGL
                     HTVGRASERSPVLLALDYNPTGDKEAPVYACLVGKGITFDSGGYSIKQTAFMDSMKSD
                     MGGAATVTGALAFAITRGLNKRVKLFLCCADNLISGNAFKLGDIITYRNGKKVEVMNT
                     DAEGRLVLADGLIDASAQKPEMIIDAATLTGAAKTALGNDYHALFSFDDALAGRLLAS
                     ASQENEPFWRLPLAEFHRSQLPSNFAELNNTGSAAYPAGASTAAGFLSHFVENYQQGW
                     LHIDCSATYRKAPVEQWSAGATGLGVRTIANLLTA"
     gene            complement(25979..26179)
                     /gene="iscX"
                     /locus_tag="JN001_000564"
     CDS             complement(25979..26179)
                     /gene="iscX"
                     /locus_tag="JN001_000564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004104502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein IscX"
                     /protein_id="HAY9051897.1"
                     /translation="MGLKWTDSREIGEALYDAYPDLDPKTVRFTDMHQWICDLEDFDD
                     DPQASNEKILEAILLVWLDEAE"
     gene            complement(26191..26526)
                     /gene="fdx"
                     /locus_tag="JN001_000565"
     CDS             complement(26191..26526)
                     /gene="fdx"
                     /locus_tag="JN001_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015683702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISC system 2Fe-2S type ferredoxin"
                     /protein_id="HAY9051898.1"
                     /translation="MPKIVILPHQDLCPDGAVLEANSGETILDAALRNGIEIEHACEK
                     SCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLVVEIPR
                     YTINHAREH"
     gene            complement(26528..28378)
                     /gene="hscA"
                     /locus_tag="JN001_000566"
     CDS             complement(26528..28378)
                     /gene="hscA"
                     /locus_tag="JN001_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001559634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S protein assembly chaperone HscA"
                     /protein_id="HAY9051899.1"
                     /translation="MALLQISEPGLSAAPHQRRLAAGIDLGTTNSLVATVRSGQAETL
                     ADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLADIQQRYPH
                     LPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELDGVVITVPAYF
                     DDAQRQGTKDAARLAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISIL
                     RLSRGVFEVLATGGDSALGGDDFDHLLADYIREQADIPDRSDNRVQRELLDAAIAAKI
                     ALSDADSVTVNVAGWQGEISREQFNELIAPLVKRTLLACRRALKDAGVEADEVLEVVM
                     VGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILVGNKPDSEMLLLDVI
                     PLSLGLETMGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRS
                     LARFALRGIPALPAGGAHIRVTFQVDADGLLSVTAMEKSTGVEASIQVKPSYGLTDSE
                     IASMIKDSMSYAEQDVKARMLAEQKVEAARVLESLHGALAADAALLSAAERQVIDNAA
                     AHLSEVAQGDDVDAIEQAIKNVDKQTQDFAARRMDQSVRRALKGHSVDEV"
     gene            complement(28395..28910)
                     /gene="hscB"
                     /locus_tag="JN001_000567"
     CDS             complement(28395..28910)
                     /gene="hscB"
                     /locus_tag="JN001_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone HscB"
                     /protein_id="HAY9051900.1"
                     /translation="MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQ
                     LAAVQQSATINQAWQTLRHPLMRAEYLLSLHGFDLASEQHTVRDTAFLMEQLELREEL
                     DEIEQAKDEARLESFIKRVKKMFDTRHQLMVEQLDNETWDAAADTVRKLRFLDKLRSS
                     AEQLEEKLLDF"
     gene            complement(29006..29329)
                     /gene="iscA"
                     /locus_tag="JN001_000568"
     CDS             complement(29006..29329)
                     /gene="iscA"
                     /locus_tag="JN001_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly protein IscA"
                     /protein_id="HAY9051901.1"
                     /translation="MSITLSDSAAARVNTFLANRGKGFGLRLGVRTSGCSGMAYVLEF
                     VDEPTPEDIVFEDKGVKVVVDGKSLQFLDGTQLDFVKEGLNEGFKFTNPNVKDECGCG
                     ESFHV"
     gene            complement(29346..29732)
                     /gene="iscU"
                     /locus_tag="JN001_000569"
     CDS             complement(29346..29732)
                     /gene="iscU"
                     /locus_tag="JN001_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000331707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold IscU"
                     /protein_id="HAY9051902.1"
                     /translation="MAYSEKVIDHYENPRNVGSFDNNDENVGSGMVGAPACGDVMKLQ
                     IKVNDEGIIEDARFKTYGCGSAIASSSLVTEWVKGKSLVEAQAIKNTDIAEELELPPV
                     KIHCSILAEDAIKAAIADYKSKREAK"
     gene            complement(29760..30974)
                     /gene="iscS"
                     /locus_tag="JN001_000570"
     CDS             complement(29760..30974)
                     /gene="iscS"
                     /locus_tag="JN001_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311423.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HAY9051903.1"
                     /translation="MKLPIYLDYSATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFG
                     WQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKT
                     EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV
                     QDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKIYGPKGIGALYV
                     RRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNR
                     LWNGIKDIEEVYLNGDLEHGAPNILNVSFNYVEGESLIMALKDLAVSSGSACTSASLE
                     PSYVLRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGRLRDLSPLWEMYKQ
                     GVDLNSIEWAHH"
     gene            complement(31086..31574)
                     /gene="iscR"
                     /locus_tag="JN001_000571"
     CDS             complement(31086..31574)
                     /gene="iscR"
                     /locus_tag="JN001_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002913993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly transcriptional regulator
                     IscR"
                     /protein_id="HAY9051904.1"
                     /translation="MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQ
                     LFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDATRCQGKGGCQGGD
                     KCLTHALWRDLSDRLTGFLNNITLGELVNNQEVLDVSGRQHTHDAPRTRTQDAIDVKL
                     RA"
     gene            complement(31844..32584)
                     /gene="trmJ"
                     /locus_tag="JN001_000572"
     CDS             complement(31844..32584)
                     /gene="trmJ"
                     /locus_tag="JN001_000572"
                     /EC_number="2.1.1.200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ"
                     /protein_id="HAY9051905.1"
                     /translation="MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDS
                     QAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVA
                     EAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAW
                     LATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTR
                     ARPESQELNILRGILASIEQQNKGNKAE"
     gene            32703..33506
                     /gene="suhB"
                     /locus_tag="JN001_000573"
     CDS             32703..33506
                     /gene="suhB"
                     /locus_tag="JN001_000573"
                     /EC_number="3.1.3.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol-1-monophosphatase"
                     /protein_id="HAY9051906.1"
                     /translation="MHPMLNIAVRAARKAGNLIAKNYETPDAVEASQKGSNDFVTNVD
                     KAAEAVIIDTIRKSYPQHTIITEESGELEGTDQDVQWVIDPLDGTTNFIKRLPHFAVS
                     IAVRIKGRTEVAVVYDPMRNELFTATRGQGAQLNGYRLRGSTARDLDGTILATGFPFK
                     AKQYATTYINIVGKLFNECADFRRTGSAALDLAYVAAGRVDGFFEIGLRPWDFAAGEL
                     LVREAGGIVSDFTGGHNYMLTGNIVAGNPRVVKAMLANMRDELSDALKR"
     gene            33651..34505
                     /locus_tag="JN001_000574"
     CDS             33651..34505
                     /locus_tag="JN001_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311427.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY9051907.1"
                     /translation="MALPVNKRVLKILFILFVVAFCVYLVPRVAINFFYYPDDKIYGP
                     DPWSAESVEFTAKDGTRLQGWFIPSSTGPADNAIATIIHAHGNAGNMSAHWPLVSWLP
                     ERNFNVFMFDYRGFGKSKGTPSQAGLLDDTQSAINVVRHRSDVNPQRLVLFGQSIGGA
                     NILAVIGQDDREGIRAVILDSTFASYATIANQMIPGSGYLLDESYSGENYIASVSPIP
                     LLLIHGKADHVIPWQHSEKLYSLAKETKRLILIPDGEHIDAFSDRHGDVYREQMVDFI
                     LSALNPQN"
     gene            34696..35976
                     /gene="csiE"
                     /locus_tag="JN001_000575"
     CDS             34696..35976
                     /gene="csiE"
                     /locus_tag="JN001_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary phase inducible protein CsiE"
                     /protein_id="HAY9051908.1"
                     /translation="MMPTLAPPSVLSAPQRRCQILLTLFQPGLTATMATFSELNGVDD
                     DIASLDISETGREILRYHQLTLTTGYDGSYRVEGTVLNQRLCLFHWLRRGFRLCPSFI
                     TSQFTPALKSELKRRGIARNFYDDTNLQALVNLCSRRLQKRFETRDIHFLCLYLQYCL
                     LQHHAGITPQFNPLQRRWAESCLEFQVAQEIGRHWQRRALQPVPPDEPLFMALLFSML
                     RVPDPLRDAHQRDRQLRQSIKRLVNHFRELGNVRFYDEQGLCDQLYTHLAQALNRSLF
                     AIGIDNTLPEEFARLYPRLVRTTRAALAGFESEYGVHLSDEESGLVAVIFGAWLMQEN
                     DLHEKQIILLTGNDSEREAQIEQQLRELTLLPLNIKHMSVKAFLQTGAPRGAALIIAP
                     YTMPLPLFSPPLIYTDLTLTTHQQEQIRKMLESA"
     gene            complement(35968..37107)
                     /locus_tag="JN001_000576"
     CDS             complement(35968..37107)
                     /locus_tag="JN001_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate MFS transporter"
                     /protein_id="HAY9051909.1"
                     /translation="MVLQSTRWLALGYFTYFFSYGIFLPFWSVWLKGIGLTPETIGLL
                     LGAGLVARFLGSLLIAPRVSDPSRLISALRVLAMMTLLFAVAFWAGAHVAWLMLVMIG
                     FNLFFSPLVPLTDALANTWQKQFPLDYGKVRLWGSVAFVIGSALTGKLVTMFDYQVIL
                     ALLTLGVASMLLGFLIRPTIQPQGASRQQESTGWSAWLALVLQNWRFLACVCLLQGAH
                     AAYYGFSAIYWQAAGYSASAVGYLWSLGVVAEVIIFALSNKLFRRCSARDMLLISAIC
                     GVVRWGIMGATTALPWLIVVQILHCGAFTVCHLAAMRYIAARQGSEVIRLQAVYSAVA
                     MGGSIAIMTVFAGFLYQYLGHGVFWVMALVALPAMFLRPKVVPSC"
     gene            complement(37267..38157)
                     /gene="hcaR"
                     /locus_tag="JN001_000577"
     CDS             complement(37267..38157)
                     /gene="hcaR"
                     /locus_tag="JN001_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator HcaR"
                     /protein_id="HAY9051910.1"
                     /translation="MELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVG
                     VPLLVRDKRKVALTAAGECFLQDALAILEQAENAKLRARKTVQEDRQLTIGFVPSAEV
                     NLLPKVLPMFRLRQPDTLIELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELF
                     DEPLVVVLPVDHPLAHEKEITAAQLDGVNFVSTDPAYSGSLAPIVKAWFAQENSQPNI
                     VQVATNILVTMNLVGMGLGVTLIPGYMNNFNTGQVVFRPIAGNVPSIALLMAWKKGEM
                     KPALRDFIAIVQERLASVTA"
     gene            38293..39654
                     /locus_tag="JN001_000578"
     CDS             38293..39654
                     /locus_tag="JN001_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit alpha"
                     /protein_id="HAY9051911.1"
                     /translation="MTTPSDLNIYQLIDTQNGRVTPRIYTDPDIYQLELERIFGRCWL
                     FLAHESQIPKPGDFFNTYMGEDAVVVVRQKDGSIKAFLNQCRHRAMRVSYADCGNTRA
                     FTCPYHGWSYGINGELIDVPLEPRAYPQGLCKSHWGLNEVPCVESYKGLIFGNWDTSA
                     PGLRDYLGDIAWYLDGMLDRREGGTEIVGGVQKWVINCNWKSPAEQFASDQYHALFSH
                     ASAVQVLGAKDDGSDKRLGDGQTARPVWETAKDALQFGQDGHGSGFFFTEKPDANVWV
                     DGAVSSYYRETYAEAEQRLGEVRALRLAGHNNIFPTLSWLNGTATLRVWHPRGPDQVE
                     VWAFCITDKAASDEVKAAFENSATRAFGPAGFLEQDDSENWCEIQKLLKGHRARNSKL
                     CLEMGLGQEKRRDDGIPGITNYIFSETAARGMYQRWADLLSSESWQEVLDKTAAYQQE
                     VMK"
     gene            39651..40169
                     /locus_tag="JN001_000579"
     CDS             39651..40169
                     /locus_tag="JN001_000579"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate/cinnamic acid dioxygenase
                     subunit beta"
                     /protein_id="HAY9051912.1"
                     /translation="MSAQVSLELHLRISQFLFHEASLLDDWKFRDWLAQLDEEIRYTM
                     RTTVNAQTRDRRKGVQPPTTWIFNDTKDQLERRIARLETGMAWAEEPPSRTRHLISNC
                     QISETDIPNVFAVRVNYLLYQAQKERDETFYVGTRFDKVRRLEDDNWRLLERDIVLDQ
                     AVITSHNLSVLF"
     gene            40169..40489
                     /locus_tag="JN001_000580"
     CDS             40169..40489
                     /locus_tag="JN001_000580"
                     /EC_number="1.14.12.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-phenylpropionate/cinnamic acid
                     dioxygenase ferredoxin subunit"
                     /protein_id="HAY9051913.1"
                     /translation="MNRIYACPVADVPEGEALRIDTSPVIALFNVGGEFYAINDRCSH
                     GNASMSEGYLEDDATVECPLHAASFCLKTGKALCLPATDPLTTYPVHVEGSDIFIDLP
                     EAQP"
     gene            40486..41298
                     /locus_tag="JN001_000581"
     CDS             40486..41298
                     /locus_tag="JN001_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phenylpropionate-dihydrodiol/cinnamic
                     acid-dihydrodiol dehydrogenase"
                     /protein_id="HAY9051914.1"
                     /translation="MSDLHNESIFITGGGSGLGLALVERFIEEGAQVATLELSAAKVA
                     SLRQRFGEHILAVEGNVTCYADYQRAVDQILTRSGKLDCFIGNAGIWDHNASLVNTPA
                     ETLETGFHELFNVNVLGYLLGAKACAPALIASEGSMIFTLSNAAWYPGGGGPLYTASK
                     HAATGLIRQLAYELAPKVRVNGVGPCGMASDLRGPQALGQSETSIMQSLTPEKIAAIL
                     PLQFFPQPADFTGPYVMLASRRNNRALSGVMINADAGLAIRGIRHVAAGLDL"
     gene            41308..42325
                     /locus_tag="JN001_000582"
                     /pseudo
     CDS             41308..42325
                     /locus_tag="JN001_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phenylpropionate dioxygenase ferredoxin
                     reductase subunit"
BASE COUNT        10019 a        11714 c        10640 g        10003 t
ORIGIN      
        1 acgacaggtt tagccgttgt tattaccaca acgtataacg aaacgcgtat tcagccaaat
       61 actaaatgtc ctgaaaagag ctaataatca ggaggagtca tgaagaaagt ttttctttgc
      121 gccatcttgg cctccttaag ctatccggct atcgcctcat cattgcagga tcaactctct
      181 gctgtagcag aagcggaaca gcaaggtaaa aatgaagagc aaaggcagca tgacgaatgg
      241 gtcgcggagc gcaacaggga aatccagcaa gagaagcaac gtcgcgcaaa tgcccaggtc
      301 gccgctaaca aaagagcggc aacggcagca gcaaataaga aagctcgtca ggataaactg
      361 gacgccgaag cctctgcgga caaaaaacgc gatcaaagtt atgaagatga gctacgcagc
      421 ttagagattc agaaacaaaa actggcgctg gcaaaagaag aagcccgcgt taagcgagaa
      481 aacgaattta tcgatcagga actgaagcac aaagctgcgc aaaccgatgt ggtgcaatct
      541 gaagctgacg ccaacagaaa tatgactgaa ggcggtcgcg atctgatgaa aagcgtgggc
      601 aaagcagaag agaacaaatc ggacagctgg tttaattaat cgatgttagt aacttcaagc
      661 ctatgattct tgaagataaa aaaccctctg tagtaacaga gggttttgtt cattcatagt
      721 gcagggatta aaatcattcc cactcaatgg tagctggcgg cttgccgctg atgtcataca
      781 ccacgcggga aataccgttc acttcattga taatgcggtt ggaaacgcga ccgaggaaat
      841 cgtacggcag atgcgcccag tgtgcggtca taaagtcgat ggtttcgaca gcacgcagag
      901 agacaaccca gtcatactta cgaccatcgc ccattacgcc aacggaacgt accggcagga
      961 acacagtgaa cgcctggctg actttgttgt acaggtccgc tttacgcagt tcttcaatga
     1021 agatggcgtc agcacggcgc agcaggtcac agtactcttt cttcacttca cccagcacac
     1081 gaacgccaag gcctggtccc gggaacgggt gacggtacag catgtcgtac ggcaggccca
     1141 gctccagacc aatcttacgc acttcgtctt tgaacagctc tttcagcggt tcaaccaggc
     1201 ccatcttcat ctctttcggc aggccgccca cgttgtggtg agatttgatg acgtgtgctt
     1261 taccggttgc agaagccgca gattcgataa cgtcagggta gatggtgccc tgcgccagcc
     1321 acttcacgtc ttccagtttc agcgcttctt catcgaacac ttcaacgaaa acgcgcccga
     1381 tgattttacg ttttgcttcc ggatcgtttt cgccagccag cgctgacagg aagcgatctt
     1441 ctgccggtac gtgaacaatg ttcagaccaa agtgatcgcc aaacatatcc agaacctgct
     1501 ctgcttcgtt gagacgcagc aggccgttgt cgacgaatac gcaagtcaga tttttaccga
     1561 tagcgcggtg cagcagcatt gcggttacgg aggaatccac accaccagag aggccgagga
     1621 tgactttatc gtcgcctacc tgctcgcgga tgcgagctac agcatcgtcg ataattttcg
     1681 ctggcgtcca cagggcttca cactggcaga tatcacgcac aaaacgctcc agcatgtgca
     1741 taccctggcg ggtgtgagtc acttccgggt ggaactgtac gccatagaag cgtttttctt
     1801 cgttagccat aatggcaaac gggcagcttt cggtgctggc tacggtgacg aagtcggacg
     1861 ggatagcggt aactttatcg ccgtggctca tccagacatc gagcagcggt ttaccgtctg
     1921 cggtcagcgc atcttcgata ccgcgaacca gtgcgctgtc gtttacgact tcaacctgcg
     1981 cgtagccaaa ttcacgttcg ttagaggctt caacgtgacc gcccaactgc attgccatgg
     2041 tctgcatgcc atagcaaacg ccgaataccg gtacgcctgc ttcaaagaca tactgcggcg
     2101 cacgcggact gttttcttca gtagtacttt ccgggccgcc ggaaagaata atgccgcttg
     2161 gattgaagtc acgaatttgt gcttctgtca catcccacgc ccacagttcg cagtaaacac
     2221 ccagctcacg cacgcggcgc gcaaccagtt gagtgtactg agaaccgaag tccagaatga
     2281 ggatgcgatg cttatgaatg ttttccgtca ttgacgctta ttccgaggca agtgaaacag
     2341 ataatataaa tcgcccgaca tgaagtcggg cgaagagaat caggagccca gacggtagtt
     2401 cggggactct ttagtaatgg tcacgtcgtg aacgtggctt tcctgaatgc ccgcaccgct
     2461 gatacgtaca aactccgctt tagtacgcag ttcgtcgata gtaccacagc cggtcaggcc
     2521 catacaggag cgcaggccgc ccatctgctg gtgaatgatc tctttcaggc gacctttata
     2581 ggctacgcga ccttcgatac cttccggcac tagtttgtcg gcagcgttgt cactctggaa
     2641 gtaacggtca gaagaacctt tggacatcgc acccagagag cccataccac ggtaagattt
     2701 gtaagaacgg ccctggtaga gttcaatttc acccggagat tcttcagtac ccgccagcat
     2761 ggaacccacc attaccgcgc ttgcgccagc ggcgatagct ttggcgatgt cgccggagaa
     2821 gcgaatacca ccatctgcga taaccggaat acctgtgcct tccagcgctt caactgcgtc
     2881 agcaacggca gtgatctgcg gaacacctac gccagtaacg atacgagtcg tacagataga
     2941 accagggccg ataccgactt taaccgcgct gcaaccagct tctgccaaag cgcgtgcacc
     3001 tgcagctgtt gccacgttgc cgccgatgat ttgcagatcc ggatatttag cacgggtttc
     3061 acggatacgc tgcaaaacgc cttctgagtg gccgtgggag gagtcgatca gcagaacgtc
     3121 aacgccagcg gcaaccagcg cgtcaacacg ctcttcgtta cccgcacctg cgccaactgc
     3181 agcaccaaca cgcagacggc cttgctcgtc tttacaggcg ttcggtttac gttccgcttt
     3241 ctggaagtct ttcacggtga tcatgccgat caggtggaat tcgtcatcaa ccaccagcgc
     3301 tttttcaacg cgtttttcgt gcatttttgc cagcaccact tcacgggctt caccttcacg
     3361 cacggtgacc agacgctctt tcggcgtcat gtaaacgcta accggctggt tcaggtcggt
     3421 aacaaaacgc acgtcacgac cggtgataat acccaccagt tcgttttctt cggtaacaac
     3481 cggatagccc gcaaaaccgt tacgctcggt cagttctttc acttcgcgca gcgtcgtggt
     3541 tggcagaaca gtctgcggat cagtcaccac accagattcg tgttttttca cacggcgaac
     3601 ttcttctgcc tggcgttcaa tggacatgtt tttgtggata aagccgatac cgccttcctg
     3661 agccagagca atagccaggc gcgcttccgt tacggtatcc attgctgcgg aaagcatagg
     3721 gatattcaga cgaatagttt tcgtcagctg ggtgctgagg tcagcagtat tcggcagaac
     3781 ggtagaatga gcaggaacga ggagaacgtc gtcaaacgtc agagcttctt tagcgatacg
     3841 tagcatgggc aatatctcga ccagagtggt taataaatat tgccgcggca ttatacagag
     3901 cgtaaccgat tgcatctacc cctttttgca aaaaatgctt gctatccccg aagggcgggt
     3961 tactatcgac tgaataacct gctgatttag aatttgatct cgctcacatg ttaccttctc
     4021 aatcccctgc aatttttacc gttagtcgcc tgaatcaaac ggttcgtctg ctgcttgagc
     4081 atgagatggg acaggtttgg atcagcggcg aaatctctaa tttcacacaa ccggcttccg
     4141 gtcactggta ctttacactc aaagacgaca ccgcccaggt acgctgcgcg atgttccgca
     4201 acagcaaccg ccgggtgacc ttccgtccac agcatggaca acaagtttta gttcgcgcca
     4261 atattacgct ctacgagccg cgcggtgact accagataat cgttgagagt atgcagccgg
     4321 ccggtgaagg gctgctgcaa cagaagtacg aacagctcaa agcgaagttg caggctgaag
     4381 gtttgttcga tcagcaatac aaaaaaccac ttccctcccc tgcgcattgc gttggtgtga
     4441 tcacctcaaa aaccggtgct gcgctacatg atattttgca tgtgttaaaa cgtcgcgatc
     4501 cttctctacc ggtgatcatc taccccaccg ccgttcaggg cgatgacgca ccggggcaaa
     4561 ttgttcgcgc cattgaactg gcgaatcagc gcaatgagtg cgacgtgttg atcgttgggc
     4621 gcggcggcgg ttcgctggaa gatttatgga gttttaacga cgaacgcgta gcgcgggcga
     4681 tttttgccag ccgcattccg gtcgtcagcg ccgtcgggca tgagacggat gtgaccattg
     4741 ccgattttgt tgccgatctg cgtgcgccaa cgccgtctgc cgccgctgaa gtagtgagcc
     4801 gtaatcagca agagttactg cgccaggtgc aatcgacccg tcaacggctg gagatggcga
     4861 tggattatta tctcgccaac cgcacgcgtc gctttacgca gatccatcac cgattacagc
     4921 aacagcatcc gcagctccgg ctggcacgcc agcaaaccat gcttgagcgc ctgcaaaagc
     4981 ggatgagctt tgcgctggaa aatcaactta agcgtaccgg gcaacagcag cagcggttaa
     5041 cacagcggct gaatcagcaa aatccacagc cgaagattca tcgcgcgcaa acgcgcattc
     5101 agcaactgga atatcgttta gcagaaaccc tgcgcgtaca gcttagcgcc acgcgtgaac
     5161 gtttcggtaa tgcagtaacg cacctcgaag ccgtaagccc actgtcaacg ctggcgcgtg
     5221 gatacagcgt tactactgct actgacggca atgtactgaa aaaagtgaag caagttaaag
     5281 cgggtgaaat gctaaccaca cgtctggaag acggctggat agaaagtgaa gttaaaaaca
     5341 tccagccagt aaaaaaatcg cgtaaaaagg tgcattaagc cagcacgaat tcaacgcgtt
     5401 ttttcgatat caagccatgc ccgtgctgac agaagtaatc tactgcaccg caggctttta
     5461 acacctgcaa cggttgatgg cagtctggac aaagagcttt catttcaata atttccccgc
     5521 aggatgggca acgcgcatgg ccgttatcct gatcaagcac atgctgacat tgtggacaat
     5581 gcagttccat atgaattcct ccggtagcca tccctctaca ttcatagagg gaatggcaga
     5641 taaaatactt acggataatt atttattttt cttgatgtgc ttcatcagac gcttacgttt
     5701 acgcatctgg gttggcgtca gggtgttacg cttgttcgca tacgggtttt ccccttcttt
     5761 gaactgaata cgaatcggcg atcccattac gtccagcgat ttgcggaagt agttcatcaa
     5821 gtagcgcttg taggaatcag gcaggtcttt cacctgatta ccgtgaatca ccacaatcgg
     5881 cgggttataa ccaccagcgt gggcatattt cagcttcaca cgacgaccgc gtaccagcgg
     5941 cggttggtga tcttcaacag ccatcgtcat gatgcgcgtc agcatagagg tccccacacg
     6001 acgggtggag ctgtcatacg cttcacgtac tgattcaaac aagttaccaa caccactgcc
     6061 gtgcaaggca gagataaagt gcacacgagc aaaatcgata aagcccagac ggaagtccag
     6121 cgtttctttc acctgctctt tcacttcctg gctcaggcca tcccacttat tcaccacaat
     6181 gacaagtgag cgcccactat tgagaataaa gcccagcagc gagagatcct gatcggaaat
     6241 accttcgcgc gcatcaatca ctaacatcac cacgttggca tcttcaatgg cctgcaacgt
     6301 tttgattacg gagaatttct ctacagcatc ggtgattttg ccgcgtttac gtacgccagc
     6361 ggtgtcaatg agcacatact cacgtccatc gcgttccatt ggaatgtaga tactgtcacg
     6421 cgtcgtgcca ggcatgtcat aaacaacaac gcgctcttca ccaagaatac ggttagtgag
     6481 tgtagactta cctacgttcg gacgacccac aatcgccagt ttgatcggca gactttgcgg
     6541 gtcgaagtcg tcttcctctt cttcttcgcc gttctcttcc acttcaaatt gcgcccagta
     6601 ttcagcgtct tcgtcgactt cctcttgcgg tgcgagatct tccatccacg gcagcagcac
     6661 atgctccagc agacttaata cgccacgacc gtgagacgcg gcgatcgggt agatttcacc
     6721 taagccaagc gagtagaaat caaccactgc ctgatcggga tccagaccgt cagttttgtt
     6781 tgccaccagg aaggtcggtt tttcacggga gcgcagatgt ttggcaatcg cttcatctgc
     6841 cggcatcagg cccgcgcgcg catccaccat aaacagtacg acgtccgctt cttcaatcgc
     6901 cagcagcgac tgttccgcca tgcgggtttc tacaccgtct tctgtgccat caatcccgcc
     6961 ggtatcaata cagataaact cacggccttc aatttccgca cgaccgtact tacggtcacg
     7021 agtcagaccc gggaaatccg caaccagcgc atctcgggtg cgagttagac ggttaaataa
     7081 cgtggatttt cctacgttag ggcgcccgac aagcgcgacc acaggtacca tgtttaaagc
     7141 ctcattttta taaatcatca gacaacgcac gctatattcg cgtcgttgtt aaaaacagga
     7201 aaacggcccc tgtccaggag ccgttttcaa agtgaacgac agagacgatt aacgtgtaat
     7261 agagtacacg gttccgtctt ttgcctggat cagcagtttg ccgtcagcgg caaccggttc
     7321 agtctggaaa ccggaactat caactttttg ctgggcaacg aaacgaccat cttcgacatt
     7381 aatccagtgc agataacctt cactgtcacc gaccaccagg ttgccatcat acagcaccgg
     7441 agaagtcagc aggcgatgca acagatcgct ttgtgtccac agcgtaacgc cgccatcaat
     7501 ggtcaacgcc atcacccggt cattttgatc gaccagatag atgcgattgc cgtcgacgat
     7561 gaaatcattc accgaaccca gttcgcgttt ccacataatc tgaccactgc gcagatcaag
     7621 cgccgtcagg ttaccattat aggccagcgc gaaaacaacg ccgttaacaa cgacgggagt
     7681 cgtgtcaaca tcgctcagac ggtcaatttc ggtagaaccg gtcgcctggg aaatacgctg
     7741 ctgccaaatc atctggccct gttccatcag cactgcgctg acgcgaccat tatcgccccc
     7801 cacgacggcc gcaccaaaag ccgttgccgg cgcagactcg ccacgcaaag agagcgaagg
     7861 catatcgagg ttaactgtcc atttgacagc gccgtcagct tcgttcagcg cttgtaactg
     7921 accgttactg gtgtggatta acaccagacc gtcgctgacc accgggcgcg aaagtgcttc
     7981 acccgcgact ttagtttgcc atgccacagt accatcgctg gtattcagcg cgtaaacctg
     8041 cgccttttcg ctgccaatgt agacatgccc accagacacg gtcacaccgc cagaaagtaa
     8101 tgcaggctct ttagagaacc agccatcttt ctcggccagg ctgacagacc agatttcttt
     8161 gccatcatcc gcattcagcg cttttaccaa accagcgcgg tccgctgcat agacaacgtt
     8221 gtccgccagt gccggatgaa gattggaata gaagttgcca atgccgctac caacggaagt
     8281 actccacgcc gtggtcggcg taaactggtt ttcaacggtt ggcaatgggg acatctttac
     8341 cacatcttct tcgctgttaa acagcgaaca gccgcttaaa agggtaacgg aaagcagtcc
     8401 tggcagcagt aatttacgca attgcatcgg gtccctctca gatggacaaa ttattaattt
     8461 tcatctgcat catttcgctc agtgccggag taacatcgct tttcacgcct gcttcccatg
     8521 cactacgcgc accttgctta tcacctttgc tcagcaatgc ttcaccacgc aggtcggcaa
     8581 caatggcagc ccacccttca cctttgatgg tatcaagggt tttcagcgcg gcatcagcct
     8641 gcttgagctg tacctgaacg cgagcaagac gcagatttat cacggctttg agattttcat
     8701 cgctcgtgtc tgccagcccc tgttgtaact gggcggcagc tttctctagt tcatttttgt
     8761 caacaaattg ctgcgcaagt tccaaagaag ccagcgcacc ataagtattt ttattttcag
     8821 cagcaaattt ttccgccgcc gggatgctat ccggtttgcc ttcgctcact gcggtaaccg
     8881 cattttgata ggcaagagaa gcggagcgtg cagaatcaac ctgatggctg ttccagtagc
     8941 gccagccaat cagtgcgcca acgcccaaaa tcaccccaac agccagtgct ttgccatttt
     9001 cagcaaaaaa gcgtttaacc gcttctacct ggtcgttttc gttctcgtaa atttccacgc
     9061 tgtccttctc cttccttaac ccagtaacgt gcgcaaatgc gcggctacgc tatcctgcgc
     9121 aactgccgtt tgctcaccag agcgcaaatc cttcactact gctgtgccgt tagtcacttc
     9181 agactcaccc agcaccacag caacgcgggc accccattta tcagcacggg caaactgttt
     9241 cttaaagttg ccgccgccgt ggttggtcat caatttcacg ccctgtaatt catcacgcag
     9301 acgctcagct aatgccatag ccgcagattg tgtatcagca cctgaagcca ccaggtatat
     9361 atcgacaata ggatcggctt taaattccgg attaacggcc tgtactaaca atacaagacg
     9421 ttcgaggccc atcgcaaaac cgacagccgg tgttgcacga ccgcccagtt gttccacaag
     9481 accgtcataa cgaccgcctg cacacacggt gccctgggag ccgagactgt tagtcaccca
     9541 ctcgaaaacg gtacggttat agtaatccag accacgcacc agacgctggt ttacggtgta
     9601 agcgatcccc gcgctctcaa gcagtttgca cagaccggca aaatgctcac gagattcctc
     9661 gtccagataa tcacctaatg ccggagcgtc gttgagaagc gcctgcactt ccggattttt
     9721 tgaatccagc acgcgcagcg ggttagtgta catgcggcgt ttgcagtctt cgtccagctt
     9781 ttctttatgc tgctcaagga atgccaccag cgcatcgcgg taattggcgc gtgcttccag
     9841 cgaaccgata gaattcagct caagagttac gtgttcggaa atacccagcg cgcgccacca
     9901 gcgggcggtg agcataatca gttcagcgtc gatatccgga ccttgcagac cgaaaacttc
     9961 gcagcccaac tgatggaact gacgataacg ccctttctgc ggacgctcgt gacggaacat
    10021 cggcccgata taccacagac gctgttcctg attgtacaga agaccatgct cgatgccggc
    10081 gcgtacacag cccgccgtcc cttcagggcg cagagtcagg ctgtcgccat tgagatcctc
    10141 aaaggtgtac atctcttttt caaccacgtc ggtgacttca ccaatcgcac gtttgaatag
    10201 cggggtctgc tctacaatcg gcaagcggat ttcactgtaa ccgtagctgc cgagcacgtt
    10261 tttcagtgtg ccttcaatgc gctgccagat ggccgtttcg ccaggcaggt aatcgttcat
    10321 gccgcgaatg gcttgaatgt tttttgccac gtttattctc tttctgaata taaaaatgaa
    10381 ccctcaacgc ttccctcaat gtttggggag ccatgcgggt tcaatcatac acgggaagcg
    10441 aggcgcttcc catcacgtta ttatttttca acctgctgaa cgtcaattcg acgcgcttca
    10501 tccagctgac tggctttcgc acgaatgcgt gcttccagct ggtcgatcat atcgttgttg
    10561 tccagacggt ctttgcgcac gccatcttca tagaggccgc ttttcttgtt gccgccggtg
    10621 acgccgagtg tagaaaccag cgcctcacct gggccattca ccacgcagcc gataatagaa
    10681 acgtccatcg gagtgatgat atcttccagg cgttgctcca gcgcgttaac cgtaccgata
    10741 acatcaaatt cctgacgcga acaggtcggg caggcgatga agttgatccc tcgcgaacgg
    10801 atacgcagcg atttcaaaat atcgaaaccg actttgatct cttcgaccgg atcggccgcc
    10861 agcgatacgc gcagcgtgtc gccgatgcct tcagacagca gcagacctaa accaatggcg
    10921 gattttactg ccccgctgcg tgcaccaccg gcttcggtga tccccagatg cagcggctga
    10981 tcgatctgtt ttgccagcaa acgataagac tcaacagcga ggaagacgtc agacgctttc
    11041 acgctgactt tgaactgatc gaagttcagg cgatcgagat gatcaacatg acgcatggcg
    11101 gattccagca acgcctgcgg cgtcggttcg ccatactttt cttgcagatc tttttccagc
    11161 gatccggcgt taacgccaat acggatcgga atgtttttat cgcgcgcaca gtcaaccacc
    11221 atgcgaatac gctcttcatt accgatattg ccagggttaa tacgcagaca atcgacgccg
    11281 tattccgcta ctttcagcgc aatgcgatag tcgaagtgga tgtcagccac cagcggcacg
    11341 ttaacccgct gtttgatgag tttgaacgct tctgccgcgt ccatcgtcgg tacggagaca
    11401 cggacgatat cagcgccaac gcgttccagc gccttgattt gattgaccgt tgcttcgaca
    11461 tctgtcgtac gcgtattggt catggactgt acggcgatgg gagcaccatc gccaatcggc
    11521 acattcccaa cgtaaatacg tgttgatttt ctacgttgaa ttggagcctg gttatgcatg
    11581 aaaaatctcc cgcgttaccc gtctgttact gcgccggtga ttgttcggca ttgagggtca
    11641 gacgcgcaac ctggttagtt ctgataaaac gactcagatc gacaggtttc ccttgatact
    11701 ggatctgtac tgcggctggc gcaccaattt tcagtttgta cggtgcctgg ccggttaagt
    11761 tcaaattacc gtctttacgc tgcataccgc taaacaattt tttaccggta gcatcagtga
    11821 cctccagcca gcaatcggca gtaaagttca tcaccagcgc attcggatca gccaccggcg
    11881 tggtcacgcc agcctgatcg gttggcaacg gcgcagcacc atctggcgtt gttgctgccg
    11941 ttggtgccgg ggtcgcggcg gtatcaacat ttgcctgcga aggcgaaaca accgcattct
    12001 gttgcggatc aacagctggt gctggcgcag ttacggcagg tgtttgcgtg ttggttgcgg
    12061 tagtatccac agacgctggc ggcgtggacg ttgtagccgg gtctgtagtt gtcgacgtat
    12121 ttaacggaac actctgcccc tgctcgctat tactgctcag ttccgccgaa gattgatcgg
    12181 ccatagtggt gatctcttcc tgctgagctt tgtggtcttg ccaccaccag gcaccgctca
    12241 ggccgataac cacaaacaac accagccagg tgaaggtcat cagccagccg tcacgttttt
    12301 tgcggcgttt accgagggaa aaactctgca tcggcgcaac tttcgcagcc cgtagtggag
    12361 cctgcttttc cagccctagc agcagttctt cttctggaat atgtaccaga cgcgcataag
    12421 agcggatata tccgcgcagg aatgttgaag caagatcggc gggtgcctta tcttcttcaa
    12481 tgtcgcgtac cgtggaaacc ttcaggcaaa gtcgctcggc aacggcctgc tgactaagtc
    12541 ctagttgttc gcgagcatta cgcaggcgag cgccggtagt aagtgcttca ttttggtcgt
    12601 gcgtggcttc agtattcatt cgctgcaggt acgtttaaat gagaattgag atgccggtga
    12661 accatcatgc tcacccacac cgcgaaacat ccgttaagtt aaccgttatc atacagtata
    12721 agaccgtctg tgtgctcgtg acaaagccca cattcactaa ggctaactta ctgttgcatc
    12781 gttacatact gccttaaagt cagcaaaaac gcaccgttaa tattgaccag acaattgcaa
    12841 cttaatactt cattcataaa agattacgcc acggtacata aagtaaccgt ggcgtaatgg
    12901 ctatcagacc gctttaatgt cgatggcttc accctgcatc cgtttacgca gggtacgttt
    12961 cgtacggtcg ataacatcgc ccgccaactg accacaggca gcatcgatat catcaccacg
    13021 agttttacgc acaatagtgg tgaaaccgta gctcatcagc acttttgaga aacggtcgat
    13081 acggctgttc gaactgcgtc catacggcgc gcccgggaac gggttccacg ggatcaggtt
    13141 gatcttacac ggcgtatctt tcagcagctc cgccagttgg tgcgcgtgtt cagtgccgtc
    13201 gttaacgtgg tcaagcatca cgtattcaat agtgactcgg ccctgattgg cgttggattt
    13261 ctccagataa cggcgcaccg cagcaaggaa cgtttcgata ttgtactttt tgttgatcgg
    13321 cacaatttcg tcacgaattt cgtcgttcgg cgcgtgcagg gaaattgcca gtgcaacgtc
    13381 gatcatatcg cccagtttat ccagcgccgg aactacaccg gaagtagaaa gcgtgacgcg
    13441 acgtttagac aggccaaaac cgaaatcatc cagcatgatt tccatcgccg gaacgacgtt
    13501 gttcaggttg agcagcggct cgcccatgcc catcatcact acgttagtga ttgggcgctg
    13561 accggtgact tttgctgcgc cgacgatttt cgccgcacgc cacacctggc cgataatttc
    13621 cgacacccgc aggttgcgat taaagccctg ctgggcggtg gaacagaatt tacactccag
    13681 cgcacacccc acctgcgaag agacgcagag cgtggcacgg tcgtcttccg ggatatacac
    13741 cgtttcgacg cgctgatcgc caacggcgat cgcccattta atggtgccgt cggatgaacg
    13801 ctgttcttca accacttccg gtgcgcggat ttccgccacc tctttcagtt tgccgcgcaa
    13861 cactttgttg atgtcggtca tctcatcaaa gttgtcgcag caatagtgat acatccactt
    13921 catcacctga tcggcgcgga agggtttttc acctaaatct ttaaaaaact cccgcatctg
    13981 ctgacggttg agatccagca ggttgatttt tccatctttc gtggtgacgt tttcaggtgt
    14041 gactaattgt tcagacatat gctattccgg cctcgttatt acacgttatg gcccctggag
    14101 ggttgaaaaa agaaacgccc cggtgagcgg ctgctcgtcc gggggcgctg cattgtacaa
    14161 attctggcgc acggatgcca cgtttgcacg cggcatttac gaaattatta acgggtgcgc
    14221 gggcacactt cgccttcgcc aaagaaataa gcgatttcgc gagcggcaga ttcgacggaa
    14281 tcagaaccgt gggtaccgtt ttcggtcagg ctgtcagcgt aatcagcgcg cagagtacca
    14341 gccagtgcgt ttgccggatt ggtcgcgccc agcagatcgc ggtgacgctg aacggcgttt
    14401 tcaccttcca gcacggaaac cacgatcggg ccagaggtca tgaattcaac cagaccatca
    14461 aagaacggtt ttccatcgtg ttcagcataa aagccacgtg cctgttcaac ggtcaggtgc
    14521 agcattttgg tgccgacaat tttgaaccct gcagcttcaa agcgcgcaaa gatattacca
    14581 atgacgtttt ttgctaccgc gttcggtttg atgatggaaa aagtacgttc aatagccatt
    14641 tttacctctg taaattgttc tgttgttgtc tgtaccagcg tacgagatgg cgcggattat
    14701 aatgagcaac agggccgttg actattgatg aaggtaacat ttttttaaaa taaaatgagt
    14761 tttagcaaca atcagggaca aaacagacta ttgcatgaca aatttcactg tcgcgatttg
    14821 ccccacgtca tccatcacca gcaattgata atcaccttta tccgtcaaat gcagggtcac
    14881 gttgcgcccg cgttcagtta acggttcgcc attcagaaac caccagcgtt cacctgcccc
    14941 tccacttgat tgcaacggca aagtcgcttc cgctgcgccc ggtaaacgtt taataatcgc
    15001 gccatcgcga acgcctgtca gctgcagcgg gagctgggca tagtgaccgt atggcgggca
    15061 acttgtcgag gccggtggta agcgcacagc gcgacgttct gatgcgggca gccagggttc
    15121 cagcggtagc ggccagacat ttatcatttc ttgtcgcgct tgcgggcaat cagcggcaac
    15181 acgtttgcca ttttcatcca gccagatggg gaaacgaatg ccattaatgc cttcctgctc
    15241 cggcagtaat agagttggcg gctgactccc gtccagcagc caggttgcca ggcggcggcg
    15301 acagttaccg tcaccttccg gcaaagactg tccgcccggc cagcagataa cgccacgagt
    15361 gactgagttc gggcgcgggt cttccggcag attcgcactg cgcgacagta agatattatt
    15421 gacctgattc aacaatggta cggcactggc aaagccaaac tgaccaacaa cgggcgtgca
    15481 gtccggtctg ccagtccaga tcccaatgac atagcgagcg ttaaccccaa tcgcccaggc
    15541 gtcacgataa ccatagctgg tgcccgtttt ccatgccagt ggggcgacgc gcggcaaggc
    15601 actatccggc aagggttgcg cttcatcagc cataatccgg cgaatgatcc acgccgcccc
    15661 cgacgacatt aaaggccatt caagcagcgg atcgtcaggc tgtaagcgca atttgcctgc
    15721 cttgccgtgg cgagcaaacg cggtatacgc tgccgccata tcttccagtt ttgcaccagc
    15781 gccgccgaga atgagtgaaa gattcggcgc agcaccgttg ggcaaatata acggcaatcc
    15841 aacattgcgt aactttgccg caaaccgttt cggtccatag gcttccagca cctgcacagc
    15901 aggtaagttc agcgagcgca ccagcgcctc gctcatgctg atcgggccat gaaaaccgct
    15961 atcaaagtta cctggtcgat aatcaccggt gcgccggggg acgtcttgca gcagtgatgc
    16021 cgggtggatc aagccttcat ccagcgccag accataaaca aacggtttga gcaccgatcc
    16081 tggcgatcgg atcgcattga ccatatcaac atgaccaaag cgtgaatcat cgttgagatc
    16141 aaccgatccc acccagccgc gaacacgcat atcggtatga tcaaccacga tcatcgccag
    16201 tgagctgcgc ggtggcaacc gccctttcca gttttgcgcc agttcttcca gacgtcgttg
    16261 aagaccggca tccagcgtag taacgatttt gtcgcttttg cttttaccga gcatcatgcg
    16321 cgaaaacagc ggtgccagtt gcggcatttg tcggggtgcc agccagatgg gttcttccct
    16381 tgactctttt acctgctcac gggaccacac accttgcacg gccatccgtt cgagcacttt
    16441 attacgcgcg gcttcggcac gctccggcca acgatccggg cgcagtcggc tgggcgcttg
    16501 cggtaacacc gccagcattg ccgcctcgga atagcttaaa ttcgcaggcg attttccgag
    16561 ataagcccaa cttgccgcac cgatcccctg caacgtaccg ccaaacggag cgcggttaag
    16621 atacaagatc agaatttcac gcttagacaa atgccactcc agttgcaacg cgcgccagag
    16681 ctggagaatt ttgccaccaa atgttttggg gtgaggatca agcagacgag caacctgcat
    16741 agtgagcgtg ctgccaccag aaataacccg tcccgaagtg agatcttgcc atgctgcgcg
    16801 cgccaccgag aatggattca cccccggatg cttccagaac cagcgatctt cataattgat
    16861 cagcgcttca aggtaacgtg gagacacatc ttcgattgtt accggataac gccagatgcc
    16921 atcagcatcg gcgaagcgcc agagcggcgt accatcctgc gccacgacca ctcgtgcggg
    16981 attgacttca tgcagcggta gaggccagag tttatctgct ccccacgctg caagaaaaag
    17041 gagaaatggc acagctgcca gcgttatcca gcagccgcgt ttggttaaca agcgaagcat
    17101 ttacggtcgg acaatcagca gatcttcagc cgcgccggtc gcccgccatt ggggaacata
    17161 cattgattcc accatcggtt gcggtacctg atacgttccc ggcgtcaccg cccgcgccag
    17221 atacaccagc gttaccggtt ggtattcatc aacggcaacc gccgccacaa agcgatcgtc
    17281 acggaactca atgtgcttaa tgctcgcctg ctgcatctgg ttcagtaagt tttgcacttc
    17341 gtcaccactt tgctccaggc tggcgctacc gttcgccaga ttctgatttt ccagttccag
    17401 acccgcaggc agcagatcca cgactaacgc atccggcacg ctgttactgg cttttacctg
    17461 caaccagacc agcaccagat cgccgctacg taacgagtcc agcgatttgc tcttaccatc
    17521 agtaccaaga atatgacgct cgatttgcag cacattgttc gccggtaaag gtgcggattg
    17581 cggataaccg ctggcatcca tacgcaacca taacggctga tcgccactgt ttctcacctg
    17641 caaggtggca agttgatcgc tattcagatt gctgtttagc gttttctcgc ctgtcagcgg
    17701 ctcagctgag aaagaggttt gcgcctgcca tttacccggt aaatcctgaa tcgtaggggc
    17761 agccaggaac aacgcgttac tttcctgcgt cgatagccag cgttcaccaa acgcctgctg
    17821 cgaaagtgtg ttcagcaaag tgtactgctc atcgggtagc agtttatttt cttccagcaa
    17881 ggagagcatt aacgcgttgt cgcgcagtgg actaccgtaa tcacccagcc atatccgctc
    17941 atcactattt ctcggcgttt tcagcgccag cacaatcgct tcttcaccac gcgttgcatc
    18001 acccatggtt ttcagcgcaa tgccaagttg cagcagcggt aaaccagaag cggcatctgc
    18061 acgatgctcc cagatttcac gcagcgcacc cagtggtgct ttttgctgac gggccagcac
    18121 cagcgcagcg taagactgaa cggcgaattt actggctttg agattatccg cgtacgggat
    18181 cgacatcatg cccggatctt gtaaatagcg cagcagacgc tcattacccc ggttaatggc
    18241 gtctgtcggc acgctgtaac cctgttcgcc tgcgcggacc aggaaatcca tcacgtaagc
    18301 cgtcagccag tactcttcgt caccgttttt atcccacagc gcaaagccgc cgttatcacg
    18361 ttgcatttgc agcaaacggg aaatgccgat atcgaccgat gcacggcgtt tctcatcact
    18421 gtcgcctttg atgcccaacg cctgcagttg ggctgcgttg gtataaagtg acgggaacag
    18481 gccgctggcg gtttgctcaa gacagccgta cggatacgct tttaactctt tgatataacg
    18541 tgcaatgttc agcggtggtt tgccgctcaa caacaattgc ccttccagcg taacaggcga
    18601 gaagttttgc aatccatccg ccggaatcgc ccatgtctca ccaggctgta acgccgtacc
    18661 gtaattaacc gtttgtgccg ggaacgccgg acggacgccg attttccact gcttatgctg
    18721 atcggcaacg gtttcacccg gtaacgctaa cccgctaatg gtggcctgaa tttctccatc
    18781 gccataaccc ggcaatgctc gcaccgggat aaacagcgta gtacgcacac ctggcgctaa
    18841 ttcaacggct gcgggtgaat cgctgaccag ttcaagcaaa ccactggcgg tcagggcaac
    18901 gttcagtttt tgcggtttat cggtaagatt agtgatatcc agcgtcagac gcgaggtatc
    18961 gccactcgcc ataaagcgcg gcatgttcag ttcagcaatc accggtgcgg caactatcac
    19021 tttgctttcg ttgctaccga aatcatctgc cgtccaggct tgcgccatga cgcgcaattc
    19081 accgttaaaa tcgccaatcg gcagtgtaac cgagccttcg ccctgttcgt tgagcgttac
    19141 cggcagcgcc tgctgcgcga caatattgac gtgattgacc agcggtttac caccacgttt
    19201 cagctcatca ccatcgccac cgaaacgcag agctgccaga cgcccctgac cttcaataac
    19261 ctgaccgtaa atatcgtaaa tgtctgcgcc atagcgtttc tgaccaaaga acgcctgcca
    19321 cggatctggc gtgacgtagt cagtaatatt cagcacacca ctatcaacgg cagacaccag
    19381 cacattcacc tgtttaggct tctcgccatt tttagtgctg gctttaattt tcacggttaa
    19441 tggttgattg ggacgcattt ttgctggtgt ttccagcgcc agatcgaggc gacggttttc
    19501 atcgccaagc ggcagatgca acacaccaac cgcgcgtttt ggcgtcgcgg agcgagattt
    19561 atcgctagga cgtaccacca gcgtacttaa atacagatca tgacgattcc aggttttatc
    19621 gaccggaatc gtcagatcca gcccttgagc cggaacatca atctcttgcc accacagcgg
    19681 cccttcactg gactcgacca tcgcataacc tttacccgcc gttggcgcgg cgatatgcaa
    19741 cttaatggtg tcgccagggc gataactggc tttatccagt ttcagcgtga cacggtcggg
    19801 tcgcactgcg ccgctaccgt cgctgttgtc ctgccagcta tagccagccc agaaacgaac
    19861 actactgacc gcttcattcg gcgctttgac ttccagacga taagcgcccc actctaccgg
    19921 aaaactgacc ttgccggttt cgtccgcttt cagatccaga gtttgttcat tttcgatcag
    19981 atctttttga tcaaactgtg actgccagcc ttcatcttct gaccagttcc agtagtaatc
    20041 gcggcgttcg cgaatcaggc gcacctgcaa gcccgacacg gcttttttca cgccttgtgc
    20101 atcgctataa acgatgtcaa aagcggcgtt actgccttca tcaacaatgg gctgtttcac
    20161 cgtgctgtca gtgcgataat cgtaaaccga tttcaaggcg aactgcggac ggagccccgg
    20221 caatgcattg gcaggccaga tagcctgctc agcgcggcgc gtcaccgggc gaccgcccga
    20281 ttccagcaaa ctgccctgga aaataacctg caatggggaa tgcgtttcct tccactggct
    20341 ttctgtagaa acttcgccgc gccctttatc atccagcgtc aactgaactt catccagcgt
    20401 gcgggaaagg ttttcggcag ctatatcgcc gaattcaaaa ccaggtaagg ctgacacagc
    20461 ctcacgcagt gggcgcagga aaagttgccc ttgcaaagta ttaccattag caggcgcacc
    20521 gtacaggtag tatcccacca cggagaattt cacttcatca ttcggcgtaa gcggggtttt
    20581 ctcaccggtc agattcagcg ccatacgctc tggcataaaa tcttcgacgt ggaaatccca
    20641 catccggtac tggttatcgc ccgtgttggc gcgaatatgc cacataccgg ttgccgcatt
    20701 gctatcgagt ggccaggtaa agtggtagag gccattctcc ggctgactaa cgacgctcct
    20761 gagtacctgc ccgtcaggtt taatcacgtc taacttgatg ggttgatcgg gcaatgcttt
    20821 accgtctgca tcgcgcagta aaccattgag gattaccgtt tcacctgggc gataaagatc
    20881 gcgtgggcca aacatgaaaa actgtttgct atagcctggc gcgccagcaa tgttaaattc
    20941 tgctaagtcc agcgccggaa gttttaaatc gagtagcgtt gtctgaccgt ctttacgtgc
    21001 cagcagtaat gccgcatttt tatcattttc cagctgcaca tgcccctgag cgtcactggt
    21061 tgcctgagtc agagtctgcc ctttctcatt taataaagag acttcaattc cttgctgggc
    21121 cgcgccgttt tccagacttt gggtaaagat atccagacga ttgtgataac ggtgagctga
    21181 aacgccgata tcacttaacg taaacagcgt cgcgggatta ctgtaatcgt aacgtccagc
    21241 ctgattcatc acagccagat acacgcccgc ctgctgaagc ggtttgatat cgcccagcgg
    21301 cagcaataat ttttcacggg tgttacgcgc aggattgaga tcaaaccgtc cggtgtagac
    21361 cagatccgcc atctgcagca gtttgtctga ctgccagttc gccagcgaat tgcggtattc
    21421 ccattggcta atgaatgctg gcagagattc tggcttaacg cggaagaagt taacatcgac
    21481 attattaacg ttgagcgcca ttaccggcag cccttcaacg actttgccag gcagcagcga
    21541 accacggctg gcaaaaccga cgctgggttg gatgtcgcgg gtagttatag ttttttcgta
    21601 atctttactg aaggttgcgt tgttgagtgc tttgacctcc ttgccaatag taacgatcaa
    21661 atcacgtttc ggttcgaggt ggcgtaaacg tagctcttta agattatctg acagctccca
    21721 ggcaccatcc actttgccgc tttttttatc gacgacatga ataacgcgtg agaaatcctg
    21781 atccgggtcg agagggatgg agaacgtcag caccagcgtg gctgcaccat caagttggac
    21841 ttcagagaga tccagcaatg tcagcacctt accggcactc tgttgggcca gtttttgtct
    21901 ctccggcacg gagagttttg ctgaactcgc gttttctgaa gaggccgctt tagtaacttc
    21961 agaaggcgca tcttttttca ccgctgttgg cgcgttatcg ttgttgtcgc accctgccag
    22021 cgccagcatt agcatgcagg cggctacgcg taactttttc atccctgcca caatggcccg
    22081 ttagcaacgt cgaataatta ttatgcgtga gaatttacgt tatgtaattc agtatcacgc
    22141 ccatacaatc cgaattttag tgagaattgt ggctcagaca gccaaatcag cctctttcgc
    22201 ttgtcgcttt tcactaaaca tccgacaatt tagcctaacc ccggcaaaaa tggagatgcc
    22261 tatgtccacg acatggtttg taggagccga ctggctcgcc gaacatattg atgacccgga
    22321 aattcagatt atcgatgccc gcatggcgtc gcctggacag gaagatcgta acgttgctca
    22381 ggagtatctg aatggacata ttcccggcgc agtgtttttt gatatcgaag cgctttctga
    22441 tcacacttcc ccgcttccgc acatgctgcc gcgcccgaaa acgttcgccg tggcgatgcg
    22501 tgaattaggc gttaaccagg ataagcacct gattgtctat gacgaaggta atcttttctc
    22561 agccccacga gcatggtgga tgctgcgcac ctttggtgta gagaaagtgt cgattctggg
    22621 gggtggactt gcaggctggc agcgcgatga tctgctgtta gaagaaggtg cagtagagct
    22681 gccggaagga gagtttaacg ccgcgtttaa tcctgaagcc gtggtgaaag taaccgatgt
    22741 attattggca agccatgaaa atacggcgca aattattgat gcccgcccgg ctgcacgttt
    22801 taacgcagaa gttgatgaac ctcgcccagg tttacgtcgc ggacatattc ccggagcact
    22861 gaatgttccg tggacggaac tggtgcgcga aggcgaacta aaaacgaccg atgaactgga
    22921 tgcgatattt tttggtcgcg gcgtcagcta cgacaaacca attatcgtca gctgcggctc
    22981 tggtgtaacg gcagccgtgg ttttgttagc actcgcgacg ctggatgtgc caaacgtgaa
    23041 actgtacgac ggcgcatgga gtgaatgggg cgcgcgggca gatttaccgg ttgagccagt
    23101 gaaataagta ttttacaggc aataaaaaac cgccgaattt ggcggttttt tattgctggt
    23161 ctggttcgcg gcctttccag caggttgtat taccgtagta atgcaagcgc gtctcagcgg
    23221 agacaatact cgccagtaac tctctttttg tcaagcaaaa gagagttatt attgttctgt
    23281 tagtatatta tccactgcgg ccctttccgc cgtctcgcaa gcgggcggtg gcttaaggaa
    23341 aggatgttcc gcgaccgtta gagcaagcgc gtctcagcgc ttgctatcgc ggcaatatcg
    23401 ccagtggtgc tgtcgtgatg cggtcttcgc atggaccgca caatgaagat acggtgcttc
    23461 tgtatcgtac ttattgtttc tggtgcgctg ttttcccaag taaataataa ccggagtctc
    23521 tccggcgaca atttactggt ggttaacaac cttcagagca gcaagtaagc ccgaatgccg
    23581 ccctttaggg cggcatattt tagattatcc ggttttgttt aaagtcacgc aaaaaacctc
    23641 cccagcgacg ttcatagaat ggcacaatat gttcggtaat aaagtggcta attccttttt
    23701 cccctttttt cacctgacaa atatcgattg gttcatcgcc aggtaatgta tcggtcgcta
    23761 cacttcccgt cgcctgaata atttcttcga tatcaccatc ggcttcaatg ccaataaata
    23821 aattaggctg tgcctcttcg ttctctttaa ttgaacaaat aaaagcacgc ttcaccggct
    23881 taatggtttt aaataaggtg gtgagtgaat caatcatttg tgctggcggc tctgcaactt
    23941 ccgataatat cagcgattca ccgccttcca ggatttcctg gctgctcagc ggatttccct
    24001 cttcaccaat caacaaactg atttcacgcg gcataaattc tttaccggtc ggcagtttgg
    24061 cattaaggaa gagcgtttcg ccaagggtca tctcaaacaa tgtgcgaacg ggcattacga
    24121 caaatgcctg ttcgtcttca accgcctgtt gaagcgcttc taacgaggtg aaaaaaggaa
    24181 tgacgctggt gccgtcttct ttttcccagt gctgtaaatc aagcgcacta tcttcaacca
    24241 cagcctcgcc ctgcgccgcc gtaccaggca cccagacggt ggattccagt agagtacgga
    24301 aaaaggccgg gcggtgtgcc ggttcggttg ctgctttttc cagcaggtct tcaagttcgt
    24361 tttttgtttc ggacataaga accacaattc attcaacgtt cggggcgcaa atgcctgatg
    24421 cgctacgctt atcaggccta caagggattc gcaatttgtt gaatttgcag aatttgtagg
    24481 ccggataagg cgtttacgcc gcatccggca tattagttta cgccgttaac agattagcta
    24541 tcgtgcgcac accaagtccc gtagcgcccg cagaccactg ttcaaccggc gctttacggt
    24601 aagtcgccga gcagtcgata tgcagccagc cttgctgata gttctcaaca aagtgcgaca
    24661 ggaagcccgc cgccgtgctc gcgcctgccg gatacgccgc gcttccggta ttgttcagtt
    24721 cggcaaagtt agacggcagc tggctgcggt ggaattccgc cagcggcaga cgccagaatg
    24781 gttcgttctc ttgtgaggca ctcgccagca aacgaccggc aagcgcatcg tcaaaactga
    24841 acagcgcgtg ataatcatta cccagcgcag ttttcgccgc cccggtgagg gtcgccgcat
    24901 caatgatcat ttccggtttc tgcgcactgg catcaatcag accatcggca agcaccagac
    24961 gcccttcggc atcagtgttc atcacttcaa cttttttacc gttgcgatag gtgatgatat
    25021 cgcccagctt gaacgcattg ccgctaatca ggttatccgc acagcagagg aacagcttca
    25081 cgcgcttgtt cagtccgcgc gtaatggcaa atgccagcgc cccggtaacc gttgccgcgc
    25141 cgcccatgtc cgacttcatc gagtccataa acgcagtctg tttgatgctg tagccgccgg
    25201 agtcaaaagt gataccttta cctaccaggc acgcgtacac tggcgcttct ttatcgccag
    25261 ttgggttgta atccagcgcc agcaataccg gagaacgttc tgaagcgcgt ccgacggtgt
    25321 gcagccccat ataaccttgc tcacgcagat cttcgccttt ggtgatccga taagtcacac
    25381 gatcgcccgc gacgttgctg atcagatcaa cagcacgctg tgccagttgc gatggtccca
    25441 attcttctgc cggtgcgttg atggtgtcac gcacccagtc gatgatcatc aggcggttat
    25501 ccagttcctg gcgctgggca tcgtccagat ccggccactc cactttacgc gtgcctttcg
    25561 gggctttgta accttgccag aatgcccagc agcgatccgc atcccagcct tcaccgctta
    25621 actgaacatg cttgatgccc agaccgtcaa tcttgtgcgc cgcacgctgg atcagcccca
    25681 gatcgtctgc cccgttcaaa tgcagggtaa tgccgtcatt attaatgctg taagttgctt
    25741 tttctcccca gcgcgcgtcg gcaggttggg tagagagggt aatcttcatc gcttctgtca
    25801 ttttagttat ccttctttgt aaaagggccg ccagttggca gccccaggat ttttccgcta
    25861 aatgattcgc gttgcaggaa ggcggcaagt gagtgaagcc ccaggagcat agataactat
    25921 gtgactgggg tgaacgagcg cagccaacgc atctgcggcg tgaagcatga cgcggaaatt
    25981 attcggcctc gtccagccag actaacaaaa tcgcttcgag gattttctcg ttggatgcct
    26041 gcgggtcgtc gtcgaaatct tccagatcgc aaatccactg atgcatatcg gtgaatcgaa
    26101 ccgttttcgg atccagatca ggatacgcat cgtacagtgc ttcgccaatt tcgcggctat
    26161 cggtccactt aagtcccata ctaacctctg ttaatgctca cgcgcatggt tgatagtgta
    26221 acgcgggatt tcgactacta aatcttcgtc ggtaacgcgt gcctggcagc ttaaacggct
    26281 ttcgggctcc agtccccagg ctttgtccag catgtcgtct tcctgctctg agctttctgg
    26341 cagcgagtca aaaccttcac gaacgatgca gtggcaggtg gtgcaagcac aggatttttc
    26401 acaggcgtgt tcaatctcga taccgttacg cagcgctgcg tcgagaatgg tttcaccgct
    26461 attagcttcc agaacagcgc catcagggca gaggtcctga tgaggcaaaa taacaatctt
    26521 tggcatatta aacctcgtcc acggaatggc ctttcagcgc acgacgaacc gactggtcca
    26581 tgcggcgagc ggcgaaatcc tgggtttgtt tgtctacgtt tttaatcgct tgttcgatgg
    26641 cgtcaacatc atcgccctga gccacttcac tcaggtgagc ggcagcattg tcaatgacct
    26701 gacgctctgc ggcgcttaac agcgcggcat cagcagccag cgcgccgtgc agactttcca
    26761 gcacacgcgc cgcttctact ttttgttctg ccagcatacg ggcttttacg tcctgctcgg
    26821 catagctcat tgaatctttg atcatcgaag cgatttcgct atcggtcaga ccgtaagaag
    26881 gtttgacctg aatagacgcc tcaacgccgg tggatttctc catcgccgtc acgctcaaaa
    26941 gaccgtcggc atcgacctgg aacgtcacgc gaatatgcgc accgccagcc ggtagcgccg
    27001 gaataccacg cagcgcaaaa cgcgccagtg agcggcagtc ctgcaccagt tcgcgctcac
    27061 cctgcattac atggatagac atcgccgtct gaccatcttt aaaggtggtg aaatcctgag
    27121 cgcgggccac cggaatagtg gtattacgcg gaatcacttt ctccaccagg ccgcccatcg
    27181 tttcgaggcc cagcgacagt gggatcacat caagcagcag catttcgctg tccggcttgt
    27241 tacccaccag aatatccgcc tgaatcgccg cgccaatagc gacgacttta tccgggtcga
    27301 tggaagtcag cggtggacga ccgaaaaatt cgcctacccg ttcacgcacc agcggcacgc
    27361 gagtagaacc gccaaccatc accacttcca gcacttcatc agcttctacg cccgcgtctt
    27421 tcagcgcacg acgacaagcc agtaaggttc gttttaccag tggcgcgatc agttcattga
    27481 attgttcacg gctgatttcg ccctgccagc ccgcaacgtt aacggtcacg gagtccgcat
    27541 cgctcagcgc gattttggct gcaatggcgg catccagcag ttcacgctga acgcggttat
    27601 cgctacgatc aggaatgtcc gcctgctcgc gaatgtaatc cgccagcaga tggtcgaaat
    27661 catcgccgcc gagcgcggaa tcaccgccgg ttgccagcac ttcaaacacg ccgcgactta
    27721 agcgcagaat ggaaatatca aacgtcccgc caccgaggtc ataaacggcg atcacgcctt
    27781 cctgaccgga atccagcccg taggcgatag ccgcagcggt cggttcgtta agtaagcgca
    27841 gaacatgcaa ccccgccaga cgcgccgcgt ctttggtgcc ctgacgctgg gcatcgtcaa
    27901 agtacgccgg aacggtgata acgacaccat ccagctcgcc tgccagggct tcagttgccc
    27961 gcgccgccag tgctttgagg atgtccgcag aaacgcgcac cgggttcagc agccccgccg
    28021 ccgtttcaat cattggcagg ccgttttcgc tggcctggaa ttgataaggc aaatgcggat
    28081 agcgttgctg gatatcagcc agcgagcgtc ccatcaggcg tttaacagaa ctaatggtgt
    28141 tggcggtatc gagcgctgcg ttagtacgcg cgtcataacc caccgaatgc ccttgctgtt
    28201 gatagtgaac aacagatggc agcaggtgac ggccttcatg gtcggctaac gtttcggcct
    28261 gaccgctgcg cactgtcgct accagcgagt tggttgtgcc caggtcaata ccggccgcca
    28321 gacgacgctg atgcggcgca gcactcaaac caggttcact aatttgtaat aaggccatgt
    28381 ttagcttcca gaaattaaaa atcgagcagt ttttcttcga gttgttcggc actgcttcgc
    28441 agtttatcga gaaaacgcag cttacgcacg gtatccgccg ccgcgtccca cgtctcgttg
    28501 tctaactgtt caaccatcaa ctgatggcgg gtatcaaaca tctttttcac acgtttgata
    28561 aagctttcca gccgcgcttc atctttcgcc tgttcgatct cgtccagttc ttcgcgcagc
    28621 tccagctgtt ccatcaggaa cgcggtgtcg cgcacagtat gctgctcgct ggcgagatca
    28681 aaaccgtgca aagaaagcaa atattccgcg cgcattaacg gatgacgcag cgtttgccag
    28741 gcctggttaa tggttgcaga ttgctgtacg gcggcgagtt gttccgcctg gcttccgctg
    28801 gcgaatttat caggatgata ctgacgttgt agatcctgaa aacgcaggct cagtgcctgg
    28861 gtatcgagtt gataacgggc aggcaagcca aagagggtga agtaatccat aacattctca
    28921 gggctgcgat ccgccgcgat aacggcgaat caggtaaaac aaaccccacg cgcaggcgac
    28981 cacggtgggg ttatcggtat gcgcatcaaa cgtggaagct ttcgccgcaa ccacactcat
    29041 ctttaacgtt cgggttggtg aatttaaacc cttcattcag gccttctttt acgaagtcca
    29101 gctgcgtacc gtccagaaat tgcaggcttt tgccatcgac cacgactttc acgcctttgt
    29161 cttcaaacac gatgtcttcc ggcgtcggtt cgtcaacaaa ttccagtaca taagccatac
    29221 ctgaacatcc ggaggttctc acgcccagac gcaggccaaa ccctttgccg cggttagcca
    29281 gaaaggtatt tactcgcgct gctgcactgt cgctcagtgt aatcgacata accaaacctc
    29341 aactcttatt ttgcttcacg tttgctttta tagtccgcaa tggcggcttt gatcgcgtct
    29401 tctgccagaa tagaacagtg aattttcacc ggcggcagtt caagttcttc agcaatatcg
    29461 gtgtttttga tcgcctgcgc ttcgacgaga gacttccctt tcacccattc ggtgaccagg
    29521 gagctggaag cgatagcaga accgcagccg taagttttaa aacgcgcgtc ttcaatgata
    29581 ccttcatcgt tgactttaat ctgcaacttc atcacgtcgc cacaggccgg tgcacccacc
    29641 atgccgctgc cgacgttctc gtcgttgttg tcaaaggaac ccacgttacg cggattctcg
    29701 taatggtcga taactttttc gctgtaagcc attataaatt ctcctgattc cgataccgat
    29761 taatgatgag cccattcgat gctgttcaga tccacgccct gcttgtacat ttcccacagc
    29821 ggagaaaggt cacgcagacg accgatggat ttacgaacta actcgatggt gtagtcgatc
    29881 tcttcttcag tagtaaaacg acctaaagag aaacggatag agctatgtgc cagctcgtcg
    29941 ttcagcccca gcgcgcgcag cacgtaggac ggttcgaggc ttgctgacgt acaggcggaa
    30001 cctgaagaaa ctgcgaggtc tttcagcgcc ataatcagcg actcaccttc aacgtagttg
    30061 aagctgacgt tgagaatgtt cggcgcaccg tgttccaggt caccgttcag gtaaacttct
    30121 tcgatatctt tgatgccgtt ccacagacgg ttacgcaggc cgcgcagacg ttccatctcg
    30181 gtcgccatct cttcttttgc gatgcgatag gcctcgccca ttccgacgat ctggtgaaca
    30241 ggcagagtgc cggaacgcat accgcgctcg tgaccgccgc cgtgcatttg cgcttcgatg
    30301 cgtacgcgcg gtttacgacg tacatacagc gcaccgatac ctttcgggcc atagattttg
    30361 tgaccggaga aagacatcag gtcaactttc aactggctca ggtcgatagg cagtttgccc
    30421 acgctctggg ttgcatcaac gtgatagata atgccacgag cacggcacat ttcgccgata
    30481 gccgcgatat cctgcaccac gccgatttcg ttatttacgt gcatgatgga aacaaggatg
    30541 gtgtcgtcac gcatcgctgc ttcaagttct ttcaggtcga taatgccgtt acgctgcggt
    30601 gccaggtagg tgacttcaaa accttcgcgc tccagctgac ggcaggtatc cagtaccgct
    30661 ttgtgttcgg ttttgctagt gatgatgtgc ttgccttttt tctgataaaa gttggctgca
    30721 cctttgatcg ccaggttgtc agattcggtt gcaccagagg taaagacgat ttcacgcgga
    30781 tcagcgccga ccagatcggc tatctgatta cgggcgatat ctaccgcttc ttcagcctgc
    30841 cagccgaaac ggtgagaacg agaggccggg ttaccaaagg ttccgtccat cgtcatgaac
    30901 tgcatcattt tctcggcaac acgcgggtcc accggcgtgg ttgcggagta gtcgagataa
    30961 atcggtaatt tcattgctct ataaactccg tacatcactc aatgcaagga atcaggctac
    31021 cggctggatg tacgaccgtg tttacggagt atttagcact ccggcctgat tctgaattct
    31081 ttttattaag cgcgtaactt aacgtcgatc gcgtcttgtg tgcgggtgcg tggcgcgtcg
    31141 tgagtatgct gacgaccaga cacatccagc acttcctggt tattaaccag ttcgcctaaa
    31201 gtaatgttgt tgagaaaacc ggtgagacgg tcgctcaaat cacgccacag cgcgtgggtc
    31261 aggcatttat cgccgccctg gcagccgcct ttaccctgac aacgggtggc atctacagat
    31321 tcgtcaacgg cgctaatcac ttcgccaacg gcgatgctgc tggcatcttt gcctaacaga
    31381 taaccaccgc ctggtccacg tacgctggaa accagaccat ttttacgcag acgggaaaac
    31441 agttgttcca gataagaaag ggaaatgccc tgacgttcgg aaatatcagc caacggtacc
    31501 gggcccgctt cagagttgag cgcaacgtca agcattgcgg tcacggcata gcgcccttta
    31561 gatgtcagtc tcatgtctta cttcacctca aactcgcccc tgcccggggt tttttattgt
    31621 aaaagtgggg gtattgaata gcagggtcaa gtctgacatt cccgagtaaa ttggtcaact
    31681 atttacttga ctgatttagt cgggtattta accttcagtg ccattttttt atcgtggcgt
    31741 ttgtacctgt tgtcggatgc ggtgtgaaca ccttatccga cctacggttc tgtacattgt
    31801 aggcctgata agacgcgtta agcgtcgcat caggcaacta ctgttattcg gccttgttac
    31861 ctttattctg ctgctcaata gaagccagaa tcccgcgcag gatattcaat tcctggcttt
    31921 ccgggcgcgc acgggtaaac agacggcgca atttattcat cacctgcccc ggatggtttt
    31981 cacggataaa accggttgcc agcagcgttt gttccagatg accataaaaa cgctccagat
    32041 catcgaccag cggatacggc gtctcttcat gctcgacctg ctcgccgttt tcctgagttg
    32101 ccagccaggc catgcgcact tcataggcaa taacctgaac cgccatcgcc aggttcagcg
    32161 agctgtattc cgggttagcc gcaatcgcga catgataatg gcatttctgc aactcttcat
    32221 tggtcaagcc gacgcgctcg cgaccaaaca ccagcgccac cggggtattt gccgcttcag
    32281 cgacgctttt caggccgcat tcgcgcgggt cgagcatcgg ccatggcagc gtgcgggaac
    32341 gtgcgctggt gcccaccacc aagctacaac cggctaacgc ttcgtcgagc gtatcgacga
    32401 tgtgagcatt accaatcaca tcgctggccc ctgctgccag ggcaatcgcc tgggagtcgg
    32461 gtttcaccag tggattaacc agccacagat tggttaatcc cattgttttc atggcacggg
    32521 caacagaacc catattgccg gtgtgtgacg tctccaccag cacaattcga atattttgca
    32581 gcattgtctt tcttcatcta aagattattc acgcatctta tcataaaacg aagacagatg
    32641 ccgatctcgc tgctatactc tgcgccgttt tcccgttctt taacatccag tgagagagac
    32701 cgatgcatcc gatgctgaac atcgccgtgc gcgcagcgcg caaggcgggt aatttaattg
    32761 ccaaaaacta tgaaaccccg gacgctgtag aagcgagcca gaaaggcagt aacgatttcg
    32821 tgaccaacgt agataaagct gccgaagcgg tgattatcga cacgattcgt aaatcttacc
    32881 cacagcacac catcatcacc gaagaaagcg gtgaacttga aggtactgat caggatgttc
    32941 aatgggttat cgatccactg gatggtacta ccaactttat caaacgtctg ccgcacttcg
    33001 cggtatctat cgccgttcgt atcaaaggcc gcaccgaagt tgctgtggta tacgatccta
    33061 tgcgtaacga actgttcacc gccactcgcg gtcagggcgc acagctgaac ggctaccgtc
    33121 tgcgcggtag caccgctcgc gatctcgacg gtaccattct ggcgaccggc ttcccgttca
    33181 aagcaaaaca gtacgccact acctacatca acatcgtcgg caaactgttc aacgaatgtg
    33241 cagacttccg tcgtaccggt tctgcggcgc tggatctggc ttacgtcgct gcgggtcgtg
    33301 ttgacggttt ctttgaaatc ggtctgcgtc cgtgggattt cgcggcaggc gagctgctgg
    33361 ttcgtgaagc gggcggcatc gtcagcgact tcaccggtgg tcataactat atgctgaccg
    33421 gtaacatcgt tgctggtaac ccgcgtgttg tgaaagccat gctggcgaac atgcgtgatg
    33481 agttaagcga cgctctgaag cgttaatgac tcaggcgggt gatgtcactc acccgccctc
    33541 gcctttcagg cgctattccg aaatacttcc tcaccgcttt actttctttc gtcactctcc
    33601 caccatcttt ccccgattaa tggatgataa agaagtcaca aggaaaggtt atggcgctgc
    33661 cagtgaacaa acgcgttctc aaaattctgt ttattctctt tgttgttgcc ttctgcgttt
    33721 atttagtgcc gcgcgttgcc atcaacttct tctattatcc tgacgataaa atttacggtc
    33781 ccgacccctg gtcggcggaa tccgtcgaat ttacggctaa ggacggtact cgtctgcaag
    33841 gctggtttat tccttcttcg acgggccctg ctgacaatgc catcgcaacc atcattcatg
    33901 ctcacggcaa tgccggaaat atgtccgccc actggccgct ggtcagttgg ttacccgagc
    33961 gtaatttcaa cgtttttatg tttgattatc gcgggtttgg taaatcaaaa ggcacgccgt
    34021 cccaggccgg attgctggac gatacgcaaa gtgccatcaa tgtggtgcgc catcgcagtg
    34081 atgtaaaccc acaacggctg gtgctgttcg ggcagagtat tggcggggcg aatattcttg
    34141 ctgttattgg tcaggatgat cgtgaaggca tacgtgcggt gatcctcgac tccacatttg
    34201 cctcttatgc aaccatcgcc aatcagatga tccccggcag tggctactta cttgatgaga
    34261 gttacagcgg cgaaaattat atcgccagcg tcagcccgat cccgctttta ctcattcacg
    34321 gtaaagctga tcacgttatc ccatggcagc acagcgaaaa gttgtatagc ctggcaaaag
    34381 agacaaaacg gttgatccta atcccggatg gcgaacacat tgatgctttt tccgatcgtc
    34441 acggcgatgt ttatcgcgaa cagatggtgg actttatcct tagcgcgttg aatccgcaga
    34501 actaacccat gatcgctagc acgataatca ttcacaaaac caccttaaga catgctaatc
    34561 cactggtcag aacagtttaa gatgagaaaa attctgtgac gcttgccaac atttctgatg
    34621 attagcattc ccttcgccat ttacctgagc aaactttagc tattcttatc aattatgctt
    34681 atgggagatc tacagatgat gcctacgctt gctccaccat ctgtcctttc ggctccccag
    34741 cgccgctgcc agatcttgct gacgctcttt cagccggggt tgaccgccac catggcaacc
    34801 ttcagcgagc ttaatggtgt ggatgatgat attgccagtc ttgatatcag cgaaacagga
    34861 cgggagatcc tgcgctatca tcaactcaca ctgacgactg gttatgacgg tagctaccgg
    34921 gttgaaggta cagtgcttaa ccaacgtttg tgtttatttc actggctacg acgtggtttc
    34981 cgtctgtgtc cgtcatttat taccagccaa ttcacccccg ccctgaagag tgaactgaag
    35041 cggcgcggaa ttgcgcgtaa cttttacgac gataccaatc tacaagcgtt agtgaatctc
    35101 tgctcccgac ggctgcaaaa acgctttgaa acgcgcgata ttcatttcct gtgtctgtat
    35161 ctgcaatatt gtttgctgca acaccacgct ggaattacgc ctcagtttaa tccgctccaa
    35221 cgtcgctggg cggaatcctg ccttgaattt caggtagcgc aggaaattgg acgccactgg
    35281 cagcgtcggg cgctccagcc tgtaccgcct gatgagccac tgtttatggc attacttttt
    35341 tccatgttgc gggttcccga tccattgcgt gatgcgcatc agcgagacag acaattgcgt
    35401 cagtctatca aacgtctggt aaaccatttt cgtgagctgg gaaatgttcg tttttatgat
    35461 gaacaggggt tatgcgatca gctttatacc cacctcgccc aggcgttaaa tcgcagtttg
    35521 tttgccatcg gtattgataa taccctgcca gaagagttcg ccagactgta cccacgcctg
    35581 gtgcgcacca cccgcgcggc gctggccgga tttgaaagtg aatacggcgt ccatctttct
    35641 gatgaggaaa gtggtctggt cgcggtgatt ttcggtgcct ggctaatgca ggaaaacgat
    35701 ctgcatgaaa aacagattat tcttcttacc gggaatgata gcgagcgaga agcgcagatt
    35761 gagcagcagt tacgcgaact aacgttactg ccgctcaaca ttaaacatat gtcggtaaag
    35821 gcatttttgc agacaggcgc tccgcgcggc gcggcactga ttattgcgcc ttataccatg
    35881 ccgttaccgc tcttttcacc accgctgatc tatacggacc tgacactgac aacacatcaa
    35941 caggagcaga tccgcaaaat gctcgaatca gcatgaggga acaactttcg ggcgcaaaaa
    36001 cattgccgga agcgccacca gcgccattac ccagaacacg ccgtggccca gatattgata
    36061 caggaaaccg gcgaaaacgg tcatgatagc tatactgccg cccatcgcga cggcagagta
    36121 aaccgcctgt aaacggatga cttcgctacc ctggcgagcg gcaatatagc gcatggcggc
    36181 caggtggcag accgtgaagg cgccgcaatg cagaatttgc accactatca accacggcaa
    36241 cgccgtagtt gctcccataa tgccccagcg cactacgccg caaatcgccg agatcaacag
    36301 catatcgcgt gcactacaac ggcggaaaag tttattactc agcgcaaaga taatgacttc
    36361 cgccaccacg cccagcgacc acaaataccc caccgccgag gccgagtagc cagctgcctg
    36421 ccagtaaatg gcgctaaaac cgtaataggc cgcatgtgcc ccctgcaata aacaaacgca
    36481 ggccagaaag cgccagttct gaagaaccag cgccaaccac gctgaccaac cggtgctctc
    36541 ctgctggcgg cttgcccctt gtggctgaat cgtcggacgg atgagaaagc cgagcagcat
    36601 agatgccacg cccaatgtta acagcgcgag gatcacctga taatcaaaca tagtgaccag
    36661 tttgcccgtc agcgccgagc caatgacaaa cgccaccgag ccccacagtc gcactttgcc
    36721 gtaatcaagc gggaactgct tttgccacgt attcgccagt gcatcggtca acggtaccag
    36781 cggtgagaaa aagaggttaa agccaatcat caccagcatc agccacgcta cgtgcgcccc
    36841 cgcccagaag gcgacagcaa agagaagtgt catcattgcc agcacgcgca aggcggaaat
    36901 caggcgagaa ggatcgctga cgcggggcgc gatgagcaaa ctcccgagaa aacgggcaac
    36961 cagacctgcc cccaataaca ggccgatggt ttctggcgtt aaaccaatcc ctttaagcca
    37021 gacgctccag aaaggtagaa aaatgccgta actaaaaaag tatgtgaaat agccgagcgc
    37081 caaccagcgc gtggattgca aaaccatgag tccctcccgt caggaggcgt tagtctgggg
    37141 ttaatcgaat gttggtgcaa gttgaaaaat aagaatattc gagcctgctt cccgatgtct
    37201 gtaacgccag ttcacaagca ctaaaaaact gcgatccgcg acgcatgttg caaaaataat
    37261 gcgtaattat gccgttacgc ttgccaaacg ttcctgcaca atggcgatga aatcgcgtaa
    37321 tgccggcttc atctcccctt tcttccacgc catcagtaaa gcaatggaag gcacatttcc
    37381 ggcaatggga cgaaaaacaa cctgtccggt attaaaatta ttcatataac cgggtatcaa
    37441 agtgacgccc agccccatgc ccaccagatt catggtcacc agaatattcg ttgccacctg
    37501 gacgatattt ggctggctgt tttcttgcgc aaaccacgct ttaacgatcg gcgcaagcga
    37561 accggaatac gccggatcgg tactgacgaa attcacgcca tccagttgcg cggcggtgat
    37621 ctctttttca tgtgctaaag ggtgatcaac cggtaacaca accactaatg gttcgtcaaa
    37681 aagctccaga taatcaatct ccgggctata aacaggatgg cgcattaagc cgacgtcgag
    37741 ttcaccacgg cgaatttttt cctcctgttg cgtggtgatt aaactcacca gctcaatcaa
    37801 ggtgtctggc tgtctgagac gaaacatcgg taatactttt ggcagtaaat tcacttccgc
    37861 cgatggcaca aagccaatgg ttaattgtct gtcttcctga acagttttcc gcgcccgtaa
    37921 tttggcattt tccgcttgtt cgaggattgc cagcgcgtcc tggagaaaac attctcccgc
    37981 cgccgtcaac gcgactttgc gcttatccct caccagtaac ggaacaccga cacagttttc
    38041 aagatcgcgg atctggctgc ttaacgaagg ctgtgaggta tgcagttttt ccgccgcacg
    38101 ggtaaagttc agtgcctgcg ccactgcgac gaaatagcgt aaatgccgta gttccatcac
    38161 cttccccttg ttatcgaaaa aacgtctcag ctggtagaaa ttaactattt cacatattag
    38221 caaccaacca gcaacatcct tatggcacaa aaatagaagg tcaatacatc ttatctttca
    38281 ggattaaaaa atatgaccac accctcagat ttgaacattt accaactgat tgacacccaa
    38341 aatggtcggg tcactccgcg tatttatacc gacccggata tttaccaact ggagcttgag
    38401 cgtattttcg gtcgttgctg gctatttctc gcccacgaaa gccagatccc aaaacccggt
    38461 gatttcttta acacctacat gggagaagat gcggttgtcg tagtgcgtca gaaagacggc
    38521 agcatcaagg cgtttctcaa ccaatgccgc caccgggcca tgcgtgtgag ttatgcagat
    38581 tgcggcaaca ctcgcgcctt tacctgcccg tatcacggct ggtcttatgg cattaacggc
    38641 gagttgatcg atgtaccgct ggaacctcgc gcctacccac aagggttgtg taaatcccac
    38701 tgggggctaa acgaagttcc ttgtgtggag agttataaag ggctgatttt tggcaactgg
    38761 gataccagcg caccgggcct gcgtgattac cttggtgaca ttgcctggta tctggatggc
    38821 atgctggatc gtcgcgaagg cggcaccgaa attgtcggcg gcgtacaaaa gtgggtgatc
    38881 aactgtaact ggaaatcccc ggcagagcag ttcgccagtg accaatatca tgctctgttc
    38941 agccatgctt ctgccgttca ggtattaggg gcgaaagatg atggcagcga taagcgtctc
    39001 ggtgatggac aaaccgcccg cccggtgtgg gaaaccgcca aagatgcgct gcaatttggt
    39061 caggacggtc acggtagcgg tttcttcttt actgaaaaac cggatgctaa tgtctgggtc
    39121 gatggcgcgg tttccagcta ttaccgcgaa acctatgccg aagcagaaca acgtttaggt
    39181 gaagttcgcg ccctgcgcct ggcgggtcat aacaatatat tccccacgct ttcatggcta
    39241 aacggcactg ccacactccg cgtctggcat ccgcgcggcc ctgatcaagt tgaagtgtgg
    39301 gcgttctgta ttactgacaa agccgcctcc gatgaagtta aagccgcttt tgaaaacagc
    39361 gccactcgtg cttttggtcc tgctggtttt ctcgagcagg atgactcgga gaactggtgt
    39421 gaaatccaga aattgcttaa aggccaccgc gcccgcaaca gcaaactgtg tctggaaatg
    39481 gggcttggtc aggaaaagcg ccgcgacgac ggcattcctg gcattactaa ctatatcttt
    39541 tcagaaactg ccgctcgtgg aatgtaccaa cgctgggccg atcttctgag tagcgaaagc
    39601 tggcaggaag tgctcgataa aaccgccgct taccagcagg aggtgatgaa atgagtgcgc
    39661 aagtttcact agagttacat ctccgcatta gccagtttct ctttcacgaa gccagcttac
    39721 tggacgactg gaaatttcgt gactggctgg cgcagctcga cgaagagatt cgttacacca
    39781 tgcgcaccac agttaacgcg caaacacgcg accgccgcaa aggcgtccag ccaccgacaa
    39841 cctggatttt taatgacacc aaagaccagc tggagcggcg aatcgcccgt ctggaaacgg
    39901 gcatggcctg ggcagaagag ccgccgtcac gcacccgtca cttaatcagc aactgccaga
    39961 taagcgaaac cgacatccca aacgtatttg ctgtgcgggt aaattatctg ctttatcagg
    40021 cacaaaaaga gcgcgatgaa acattctatg ttggaacgcg tttcgacaaa gttcgccgtc
    40081 tggaagatga caactggcgc ttgctggaac gggatatcgt cctggatcaa gcggtaatca
    40141 cttcccataa cctgagtgta ctgttctgat gaatcgaatt tatgcgtgtc ccgttgcgga
    40201 tgtgccggag ggtgaggctc tccggatcga tacctcgccc gtcatcgccc tgttcaacgt
    40261 tggcggcgag ttttatgcca ttaacgatcg ttgcagccat ggtaatgcgt cgatgtcaga
    40321 agggtatctg gaagatgacg ccacggtgga gtgcccgcta cacgccgcca gtttttgcct
    40381 gaaaacgggg aaagcgttat gcctgcccgc caccgatccg ctcaccactt atccagtaca
    40441 cgttgaaggt agtgacattt tcatcgactt accggaggcg cagccatgag cgatctgcat
    40501 aacgagtcca tttttattac cggcggcgga tcgggattag ggctggcgct ggtcgagcga
    40561 tttatcgaag aaggcgcgca ggttgccacg ctggaactgt cggcggcaaa agtcgccagt
    40621 ctgcgtcagc gatttggcga acatattctg gcggtggaag gtaacgtgac ctgttatgcc
    40681 gattatcaac gcgcggtcga tcagatcctg actcgttccg gcaagctgga ttgttttatc
    40741 ggcaatgcag gcatctggga tcacaatgcc tcactggtta atactcccgc agagacgctc
    40801 gaaaccggct tccacgagct gtttaacgtc aacgtactcg gttacctgct gggcgcaaaa
    40861 gcctgcgctc cggcgttaat cgccagtgaa ggcagcatga ttttcacact gtcaaatgcc
    40921 gcctggtatc ctggcggcgg tggcccgctg tacaccgcca gtaaacatgc cgcaaccgga
    40981 cttattcgcc aactggctta tgaactggca ccgaaagtgc gggtgaatgg cgtcggcccg
    41041 tgtggtatgg ccagcgacct gcgcggccca caggcgctcg ggcaaagtga aacctcgata
    41101 atgcagtctc tgacgccgga gaaaattgcc gccattttac cgctgcaatt tttcccgcaa
    41161 ccggcggatt ttacggggcc gtatgtgatg ttggcatcgc ggcgcaataa tcgcgcatta
    41221 agcggtgtga tgatcaacgc tgatgcgggt ttagcgattc gcggcattcg ccacgtagcg
    41281 gctgggctgg atctttaagg aagcacgatg aaagaaaaaa cgatcattat tgtcggtggc
    41341 gtgcaagcgg cggcaatggc tgcggcctcg ctacgccagc aagggttcac cggtgagctg
    41401 catctgtttt ccgatgagcg acatcttcct tatgaacgac ctccactctc gaaatccatg
    41461 ttgctggaag attccccgca gttacagcag gtgttacccg ctaactggtg gcaggaaaac
    41521 aatgttcatc tgcattccgg tgtaaccatc aaaacgctgg gtcgcgacac acgagagtta
    41581 gtgttaacca acggcgaaag ctggcactgg gatcagcttt ttatagcaac cggcgcggca
    41641 gctcgaccgc tgccgttgct tgatgcactg ggagaacgct gctttaccct acgccatgcc
    41701 ggtgatgccg ccagactgcg agaagttctg cagcccgaac ggtcagtcgt gattgtcggt
    41761 gccggaacta ttggtctgga actggctgcc agcgccacgc agcgcagcgc agcgcagatg
    41821 taaggtgaca gtgattgaac tggcggcaac cgtcatgggc cgtaatgcac caccgcccgt
    41881 gcaacgctat cttttacagc gccaccagca ggctggtgtg cgcattctgc tcaataatgc
    41941 cattgaacat gtagtcgatg gtgaaaaagt agaactgacg ctgcaaagtg gggaaacgct
    42001 tcaggctgat gtggtgattt acggtattgg tatcagcgcc aacgagcaac tggctcgcga
    42061 ggccaacctt gatactgcca atggcattgt cattgatgag gcttgccgca cctgcgatcc
    42121 cgcgatcttt gccggtggcg atgtggcaat cactcgtctt gataatggtg cactacaccg
    42181 ctgtgaaagc tgggaaaacg ccaataacca ggcgcaaatt gccgctgccg caatgttagg
    42241 gctaccgcta ccgctactgc cgtggttctg gagcgatcag tacagtgata acttacagtt
    42301 tattggcgat atgcgtggcg atgactgagg tagcctgagt ttaacggaca ctccttcctg
    42361 aaatagaatg gcatca
//
LOCUS       DADMJE010000011        40981 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.011, whole genome shotgun sequence.
ACCESSION   DADMJE010000011 DADMJE010000000
VERSION     DADMJE010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40981)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40981)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40981
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.011"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..334)
                     /locus_tag="JN001_000583"
     CDS             complement(<1..334)
                     /locus_tag="JN001_000583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY9051915.1"
                     /translation="MNKEEQYLLFALSAPMEILNQGCKPAHDSPKMYTGIKEFDLSSS
                     WGINNRDDLIQTIYQMTDDGHANDLAGLYLTWHRSSPEEWKALIAGGSERGLIYTQFV
                     AQTAMCCGE"
     gene            complement(415..1842)
                     /locus_tag="JN001_000584"
     CDS             complement(415..1842)
                     /locus_tag="JN001_000584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HAY9051916.1"
                     /translation="MKNCWKILDIEETTDVDIIRRAYLALLPSFHPETEPQGFKQLRQ
                     AYEEALRIAQSPAKSVWQPEEYEVAEHEILLAFRALLASDSERFLPSAWQRFIQQLNY
                     CSMEEIDELRWSLCTIAMNTAHLSFECVVLLAERLRWLQEENVGEIDEEELESFLYAI
                     AKGNVFNFQTILHLPVAVQNDTIDFYQMFARIWSSHPEWLTLYLAQHRAVIIPDDAKL
                     HRNLLRWYSAGRLDIPELLDYARSWREAEPDNEDARYYEYAQRVYCGEGESLLAELCD
                     YWREYPSTQADALILQWCRQHRVDYYPLVVMMIEARELVNDQGKQLLYVPGDSARTRF
                     HLYEILSDEKLSALGRSLVEMVLHKGRKPRISLTRDTEHLLWPLYLVAKQLVQASQPT
                     EESLMPIVSRLDAEDRCPLEALIIRRLLIQAANFTEKQTVEPEPQPQPMPVDDGGPGC
                     LGVIKIIFYIFIFAGLIGKILHLFG"
     gene            complement(1839..2546)
                     /locus_tag="JN001_000585"
     CDS             complement(1839..2546)
                     /locus_tag="JN001_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1266 domain-containing protein"
                     /protein_id="HAY9051917.1"
                     /translation="MDMGSQKILFALSTPMEIRNECCLPSHSSPKMYLGTCFFDLSSS
                     WGIDDRDDLLRTIHRMIENGHAARLAGFYHRWFRYSPCEWRDYLAELNEQGQAYAQFV
                     ASTAECCGEGGIKAWDYVRMGFLSRMGVLNNWLSEEESLWIQSRIHLRALRYYSNWRQ
                     YFAGYTFGRQYWQSPEDDHLPLLREFLARKEYDDSGNDMFYQLFASDDAYYPTLSWQP
                     LADYPTCPETLKDMSDL"
     gene            2709..3686
                     /locus_tag="JN001_000586"
     CDS             2709..3686
                     /locus_tag="JN001_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415177.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SEL1-like repeat protein"
                     /protein_id="HAY9051918.1"
                     /translation="MIFTSSCCDNLSIDEIIERAEKGDCEAQYIVGFYYNRDSAIDSP
                     DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEHAIFWLKKTALQGHTFASN
                     ALGWILDRGEDPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYK
                     QAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGE
                     GVDQDYKQAMYWYLKAAAQESVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDA
                     TAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGTRDVSQEIRETEDLL"
     gene            complement(3756..4238)
                     /locus_tag="JN001_000587"
     CDS             complement(3756..4238)
                     /locus_tag="JN001_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ribbon-containing protein"
                     /protein_id="HAY9051919.1"
                     /translation="MNKVAQYYRELVASLSERLRNGERDIDALVEQARERVIKTGELT
                     RTEVDELTRAVRRDLEEFAMSYEESLKEESDSVFMRVIKESLWQELADITDKTQLEWR
                     EVFQDLNHHGVYHSGEVVGLGNLVCEKCHFHLPIYTPEVLTLCPKCGHDQFQRRPFEP
                     "
     gene            4473..7055
                     /gene="leuS"
                     /locus_tag="JN001_000588"
     CDS             4473..7055
                     /gene="leuS"
                     /locus_tag="JN001_000588"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008456064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HAY9051920.1"
                     /translation="MQEQYRPEEIESKVQLHWDEKRTFEVTEDESKEKYYCLSMLPYP
                     SGRLHMGHVRNYTIGDVIARYQRMLGKNVLQPIGWDAFGLPAEGAAVKNNTAPAPWTY
                     DNIAYMKNQLKMLGFGYDWSRELATCTPEYYRWEQKFFTELYKKGLVYKKTSAVNWCP
                     NDQTVLANEQVIDGCCWRCDTKVERKEIPQWFIKITAYADELLNDLDKLDHWPDTVKS
                     MQRNWIGRSEGVEITFNVNDYDNTLTVYTTRPDTFMGCTYLAVAAGHPLAQKAAENNP
                     ELAAFIDECRNTKVAEAEMATMEKKGVDTGFKAVHPLTGEEIPVWAANFVLMEYGTGA
                     VMAVPGHDQRDYEFASKYGLNIKPVILAADGSEPDLSQQALTEKGVLFNSGEFNGLDH
                     EAAFNAIADKLTAMGVGERKVNYRLRDWGVSRQRYWGAPIPMVTLEDGTVMPTPDDQL
                     PVILPEDVVMDGITSPIKADPEWAKTTVNGMPALRETDTFDTFMESSWYYARYTCPEY
                     KEGMLDSEAANYWLPVDIYIGGIEHAIMHLLYFRFFHKLMRDAGMVNSDEPAKQLLCQ
                     GMVLADAFYYVGENGERNWVSPVDAIVERDEKGRIVKAKDAAGHELVYTGMSKMSKSK
                     NNGIDPQVMVERYGADTVRLFMMFASPADMTLEWQESGVEGANRFLKRVWKLVYEHTA
                     KGDVAALNVDALTEDQKALRRDVHKTIAKVTDDIGRRQTFNTAIAAIMELMNKLAKAP
                     TDGEQDRALMQEALLAVVRMLNPFTPHICFTLWQELKGEGDIDNAPWPVADEKAMVED
                     STLVVVQVNGKVRAKITVPVDATEEQVRERAGQEHLVAKYLDGVTVRKVIYVPGKLLN
                     LVVG"
     gene            7070..7651
                     /gene="lptE"
                     /locus_tag="JN001_000589"
     CDS             7070..7651
                     /gene="lptE"
                     /locus_tag="JN001_000589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly lipoprotein LptE"
                     /protein_id="HAY9051921.1"
                     /translation="MRYLATLLLSLAVLITAGCGWHLRDTTQVPSTMKVMILDSGDPN
                     GPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLGKVSIAKDTASVFRNGQTAEYQMIM
                     TVNATVLIPGRDIYPISAKVFRSFFDNPQMALAKDNEQDMIVKEMYDRAAEQLIRKLP
                     SIRAADIRSDEEQTSTTTDTPATPARVSTTLGN"
     gene            7651..8682
                     /gene="holA"
                     /locus_tag="JN001_000590"
     CDS             7651..8682
                     /gene="holA"
                     /locus_tag="JN001_000590"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HAY9051922.1"
                     /translation="MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQVAAA
                     QGFEEHHTFSIDPNTDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQLLTLTG
                     LLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNL
                     ELDDAANQVLCYCYEGNLLALAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWV
                     DALLMGKSKRTLHILQQLRLEGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH
                     RVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQDYGQSVWAELEGLSLLLCHK
                     PLADVFIDG"
     gene            8684..9325
                     /gene="nadD"
                     /locus_tag="JN001_000591"
     CDS             8684..9325
                     /gene="nadD"
                     /locus_tag="JN001_000591"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HAY9051923.1"
                     /translation="MKSLQALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP
                     HRPQPEANSVQRKHMLELAIANKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPL
                     AFIIGQDSLLTFPTWYEYETILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNQED
                     LHLQPAGKIYLAETPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR"
     gene            9349..9959
                     /locus_tag="JN001_000592"
                     /pseudo
     CDS             9349..9959
                     /locus_tag="JN001_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415171.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobalamin/alpha-ribazole phosphatase"
     gene            10219..10536
                     /gene="rsfS"
                     /locus_tag="JN001_000593"
                     /gene_synonym="rsfA"
     CDS             10219..10536
                     /gene="rsfS"
                     /locus_tag="JN001_000593"
                     /gene_synonym="rsfA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HAY9051924.1"
                     /translation="MQGKALQDFVIDKIDDLKGQDIIALDVQGKSSITDCMIICTGTS
                     SRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRRLYELEK
                     LWS"
     gene            10540..11007
                     /gene="rlmH"
                     /locus_tag="JN001_000594"
     CDS             10540..11007
                     /gene="rlmH"
                     /locus_tag="JN001_000594"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010618862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HAY9051925.1"
                     /translation="MKLQLVAVGTKMPDWVQTGFTEYLRRFPKDMPFELIEIPAGKRG
                     KNADIKRILDKEGEQMLAAAGKNRIVTLDIPGKPWDTPQLAAELERWKLDGRDVSLLI
                     GGPEGLSPACKAAAEQSWSLSALTLPHPLVRVLVAESLYRAWSITTNHPYHRE"
     gene            11038..12939
                     /gene="mrdA"
                     /locus_tag="JN001_000595"
     CDS             11038..12939
                     /gene="mrdA"
                     /locus_tag="JN001_000595"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-transpeptidase MrdA"
                     /protein_id="HAY9051926.1"
                     /translation="MKLQNSFRDYTAESALFVRRALVAFLGILLLTGVLIANLYNLQI
                     VRFTDYQTRSNENRIKLVPIAPSRGIIYDRNGIPLALNRTIYQIEMMPEKVDNVQQTL
                     DALRSVVDLTDDDIAAFRKERARSHRFTSIPVKTNLTEVQVARFAVNQYRFPGVEVKG
                     YKRRYYPYGSALTHVIGYVSKINDKDVERLNNDGKLANYAATHDIGKLGIERYYEDVL
                     HGQTGYEEVEVNNRGRVIRQLKEVPPQAGHDIYLTLDLKLQQYIETLLAGSRAAVVVT
                     DPRTGGVLALVSTPSYDPNLFVDGISSKDYSALLNDPNTPLVNRATQGVYPPASTVKP
                     YVAVSALSAGVITRNTTLFDPGWWQLPGSEKRYRDWKKWGHGRLNVTRSLEESADTFF
                     YQVAYDMGIDRLSEWMGKFGYGHYTGIDLAEERSGNMPTREWKQKRFKKPWYQGDTIP
                     VGIGQGYWTATPIQMSKALMILINDGIVKVPHLLMSTAEDGKQVPWVQPHEPPVGDIH
                     SGYWELAKDGMYGVANRPNGTTHKYFASAPYKIAAKSGTAQVFGLKANETYNAHKIAE
                     RLRDHKLMTAFAPYNNPQVAVAMILENGGAGPAVGTLMRQILDHIMLGDNNTDLPAEN
                     PAVAAAEDH"
     gene            12942..14054
                     /gene="mrdB"
                     /locus_tag="JN001_000596"
                     /gene_synonym="rodA"
     CDS             12942..14054
                     /gene="mrdB"
                     /locus_tag="JN001_000596"
                     /gene_synonym="rodA"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004885876.1"
                     /note="rod shape-determining protein RodA; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase MrdB"
                     /protein_id="HAY9051927.1"
                     /translation="MTDNPNKKTFWDKVHLDPTMLLILLALLVYSALVIWSASGQDIG
                     MMERKIGQIAMGLVIMVVMAQIPPRVYEGWAPYLYIICIILLVAVDAFGAISKGAQRW
                     LDLGIVRFQPSEIAKIAVPLMVARFINRDVCPPSLKNTGIALVLIFMPTLLVAAQPDL
                     GTSILVALSGLFVLFLSGLSWRLIGVAVVLVAAFIPILWFFLMHDYQRQRVMMLLDPE
                     SDPLGAGYHIIQSKIAIGSGGLRGKGWLHGTQSQLEFLPERHTDFIFAVLAEELGLVG
                     ILILLALYILLIMRGLWIAARAQTTFGRVMAGGLMLILFVYVFVNIGMVSGILPVVGV
                     PLPLVSYGGSALIVLMAGFGIVMSIHTHRKMLSKSV"
     gene            14065..15153
                     /gene="rlpA"
                     /locus_tag="JN001_000597"
     CDS             14065..15153
                     /gene="rlpA"
                     /locus_tag="JN001_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic peptidoglycan transglycosylase RlpA"
                     /protein_id="HAY9051928.1"
                     /translation="MRKQWLGICIAAGMLAACTSDDGQQQTVSVPQPAVCNGPIVEIS
                     GADPRFEPLNATANQDYQRDGKSYKIVQDPSRFSQAGLAAIYDAEPGSNLTASGEAFD
                     PTQLTAAHPTLPIPSYARITNLANGRMIVVRINDRGPYGNDRVISLSRAAADRLNTSN
                     NTKVRIDPIIVAQDGSLSGPGMACTTVAKQTYALPAPPDLSGGAGTSSVSGPQGDILP
                     VSNSTLKSEDPTGAPVTSSGFLGAPTTLAPGVLEGSEPTPAPQPVVTAPSTTPATSPA
                     MVTPQAASQSASGNFMVQVGAVSDQARAQQYQQQLGQKFGVPGRVTQNGAVWRIQLGP
                     FASKAEASTLQQRLQTEAQLQSFITTAQ"
     gene            15293..16504
                     /gene="dacA"
                     /locus_tag="JN001_000598"
     CDS             15293..16504
                     /gene="dacA"
                     /locus_tag="JN001_000598"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase DacA"
                     /protein_id="HAY9051929.1"
                     /translation="MNTIFSARIMKRLALTTALCTAFISAAHADDLNIKTMIPGVPQI
                     DAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIGN
                     DAWATGNPVFKGSSLMFLKPGMQVPVSQLIRGINLQSGNDACVAMADFAAGSQDAFVG
                     LMNSYVNALGLKNTHFQTVHGLDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFT
                     FNGIRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRTFKG
                     REAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDMYLTIPRGRM
                     KDLKASYVLNSSELHAPLQKNQVVGTINFQLDGKTIEQRPLVVLQEIPEGNFFGKIID
                     YIKLMFHHWFG"
     gene            16615..16878
                     /locus_tag="JN001_000599"
     CDS             16615..16878
                     /locus_tag="JN001_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbeD family protein"
                     /protein_id="HAY9051930.1"
                     /translation="MKTKLNELLEFPTPFTYKVMGQALPELVDQVVEVVQRHAPGDYT
                     PTVKPSSKGNYHSVSITINATHIEQVEILYEELGKIDIVRMVL"
     gene            16979..17620
                     /gene="lipB"
                     /locus_tag="JN001_000600"
     CDS             16979..17620
                     /gene="lipB"
                     /locus_tag="JN001_000600"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415163.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HAY9051931.1"
                     /translation="MYQDKILVRQLGLQPYEPISQAMHEFTDTRDDSTLDEIWLVEHY
                     PVFTQGQAGKAEHILMPGDIPVIQSDRGGQVTYHGPGQQVMYVLLNLKRRKLGVRELV
                     TLLEQTVVNTLAELGIEAHPRADAPGVYVGEKKICSLGLRIRRGCSFHGLALNVNMDL
                     SPFLRINPCGYAGMEMAKISQWKPEATTNNIAPRLLENILALLNNPDFEYITA"
     gene            17879..18832
                     /locus_tag="JN001_000601"
     CDS             17879..18832
                     /locus_tag="JN001_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415162.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator"
                     /protein_id="HAY9051932.1"
                     /translation="MDSNNQIEPCLSRKSSEGKPQIFTTLRNIALNLLTIFEAVYVHK
                     GIVNAAKVLNLPPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLES
                     ILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQL
                     SQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLL
                     PEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWP
                     LEKLPFPSLNKEQIDFSIHYNKFSLRDPILHGVIDVIRNAF"
     gene            19041..20006
                     /gene="lipA"
                     /locus_tag="JN001_000602"
     CDS             19041..20006
                     /gene="lipA"
                     /locus_tag="JN001_000602"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HAY9051933.1"
                     /translation="MSKPIVMERGVKYRDADKMALIPVKNVAIEREALLRKPEWMKIK
                     LPADSTRIQGIKAAMRKNGLHSVCEEASCPNLAECFNHGTATFMILGAICTRRCPFCD
                     VAHGRPVAPDANEPVKLAQTIADMALRYVVITSVDRDDLRDGGAQHFADCITAIREKS
                     PQIKIETLVPDFRGRMDRALDILTATPPDVFNHNLENVPRIYRQVRPGADYNWSLKLL
                     ERFKEAHPEIPTKSGLMVGLGETNEEIIEVMRDLRRHGVTMLTLGQYLQPSRHHLPVQ
                     RYVSPDEFDEMKAEALAMGFTHAACGPFVRSSYHADLQAKGMEVK"
     gene            complement(20107..20310)
                     /gene="tatE"
                     /locus_tag="JN001_000603"
     CDS             complement(20107..20310)
                     /gene="tatE"
                     /locus_tag="JN001_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocase subunit TatE"
                     /protein_id="HAY9051934.1"
                     /translation="MGEISITKLLVVAALVVLLFGTKKLRTLGGDLGAAIKGFKKAMN
                     DDDAAAKKGADVDLQAEKLSHKE"
     gene            complement(20439..21227)
                     /locus_tag="JN001_000604"
     CDS             complement(20439..21227)
                     /locus_tag="JN001_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deaminated glutathione amidase"
                     /protein_id="HAY9051935.1"
                     /translation="MLVAAGQFAVTSVWEKNAEICASLMAQAAENDVSLFVLPEALLA
                     RDDHDADLSVKSAQLLEGEFLGRLRRESKRNMMTTILTIHVPSTPGRAWNMLVALQAG
                     NIVARYAKLHLYDAFAIQESRRVDAGNEIAPLLEVEGMKVGLMTCYDLRFPELALAQA
                     LQGAEILVLPAAWVRGPLKEHHWSTLLAARALDTTCYMVAAGECGNKNIGQSRIIDPF
                     GVTIAAASEMPALIMAEVTPERVRQVRAQLPVLNNRRFAPPQLL"
     gene            21320..21703
                     /gene="crcB"
                     /locus_tag="JN001_000605"
     CDS             21320..21703
                     /gene="crcB"
                     /locus_tag="JN001_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HAY9051936.1"
                     /translation="MLQLLLAVFIGGGTGSVARWLLSMRFNPLHQAIPLGTLTANLIG
                     AFIIGMGFAWFSRMTNIDPVWKVLITTGFCGGLTTFSTFSAEVVFLLQEGRFGWALLN
                     VFVNLLGSFAMTALAFWLFSASTAH"
     gene            complement(21758..21967)
                     /gene="cspE"
                     /locus_tag="JN001_000606"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             complement(21758..21967)
                     /gene="cspE"
                     /locus_tag="JN001_000606"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY9051937.1"
                     /translation="MSKIKGNVKWFNESKGFGFITPEDGSKDVFVHFSAIQTNGFKTL
                     AEGQRVEFEITNGAKGPSAANVIAL"
     gene            complement(22142..22702)
                     /locus_tag="JN001_000607"
     CDS             complement(22142..22702)
                     /locus_tag="JN001_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid:lipid A palmitoyltransferase"
                     /protein_id="HAY9051938.1"
                     /translation="MNVSKYVAIFSFVFIQLISVGKVFANADEWMTTFRENIAPTWQQ
                     PEHYDLYIPAITWHARFAYDKEKTDRYNERPWGGGFGLSRWDEKGNWHGLYAMAFKDS
                     WNKWEPIAGYGWESTWRPLADENFHLGLGFTAGVTARDNWNYIPLPVLLPLASVGYGP
                     VTFQMTYIPGTYNNGNVYFAWMRFQF"
     gene            23291..24676
                     /gene="dcuC"
                     /locus_tag="JN001_000608"
     CDS             23291..24676
                     /gene="dcuC"
                     /locus_tag="JN001_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
                     /protein_id="HAY9051939.1"
                     /translation="MLTFIELLIGVVVIVGVARYIIKGYSATGVLFVGGLLLLIISAI
                     MGHKVLPSSQASTGYSATDIVEYVKILLMSRGGDLGMMIMMLCGFAAYMTHIGANDMV
                     VKLASKPLQYINSPYLLMIAAYFVACLMSLAVSSATGLGVLLMATLFPVMVNVGISRG
                     AAAAICASPAAIILAPTSGDVVLAAQASEMSLIDFAFKTTLPISIAAIIGMAIAHFFW
                     QRYLDKKEHISHEMLDVSEITTTAPAFYAILPFTPIIGVLIFDGKWGPQLHIITILVI
                     CMLIASILEFLRSFNTQKVFSGLEVAYRGMADAFANVVMLLVAAGVFAQGLSTIGFIQ
                     SLISIATSFGSASIILMLVLVILTMLAAVTTGSGNAPFYAFVEMIPKLAHSSGINPAY
                     LTIPMLQASNLGRTLSPVSGVVVAVAGMAKISPFEVVKRTSVPVLVGLVIVIVATELM
                     VPGTAAAVTGK"
     gene            complement(24717..25397)
                     /gene="dpiA"
                     /locus_tag="JN001_000609"
                     /gene_synonym="citB"
     CDS             complement(24717..25397)
                     /gene="dpiA"
                     /locus_tag="JN001_000609"
                     /gene_synonym="citB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component response regulator DpiA"
                     /protein_id="HAY9051940.1"
                     /translation="MTAPLTLLIVEDETPLAEMHAEYIRHIPGFSQILLAGNLAQARM
                     MIERFKPGLILLDNYLPDGRGINLLHELVQAHYPGDVVFTTAASDMETVSEAVRCGVF
                     DYLIKPIAYERLGQTLTRFRQRKHMLESIDSASQKQIDEMFNAYARGEPKDELPTGID
                     PLTLNAVRKLFKEPGVQHTAETVAQALTISRTSARRYLEYCASRHLIIAEIVHGKVGR
                     PQRIYHSG"
     gene            complement(25366..27023)
                     /gene="dpiB"
                     /locus_tag="JN001_000610"
                     /pseudo
     CDS             complement(25366..27023)
                     /gene="dpiB"
                     /locus_tag="JN001_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308685.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase DpiB"
     gene            27372..28430
                     /gene="citC"
                     /locus_tag="JN001_000611"
     CDS             27372..28430
                     /gene="citC"
                     /locus_tag="JN001_000611"
                     /EC_number="6.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[citrate (pro-3S)-lyase] ligase"
                     /protein_id="HAY9051941.1"
                     /translation="MFGNDIFTRVKRSENKKMAEIAQFLHENDLSVDTTVEVFITVTR
                     DEKLIACGGIAGNIIKCVAISESVRGEGLALTLATELINLAYERHSTHLFIYTKTEYE
                     ALFRQCGFSTLTSVPGVMVLMENSATRLKRYAESLKKFRHPGNKIGCIVMNANPFTNG
                     HRYLIQQAAAQCDWLHLFLVKEDSSRFPYEDRLDLVLKGTADIPRLTVHRGSEYIISR
                     ATFPCYFIKEQSVINHCYTEIDLKIFRQYLAPALGVTHRFVGTEPFCRVTAQYNQDMR
                     YWLKTPTISAPPIELVEIERLRYQEMPISASRVRQLLAKNDLTAIAPLVPAVTLHYLQ
                     NLLEHSRQDAAARQKTPA"
     gene            28445..28741
                     /gene="citD"
                     /locus_tag="JN001_000612"
     CDS             28445..28741
                     /gene="citD"
                     /locus_tag="JN001_000612"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase acyl carrier protein"
                     /protein_id="HAY9051942.1"
                     /translation="MKINQPAVAGTLESGDVMIRIAPLDTQDIDLQINSSVEKQFGDA
                     IRTTILDVLARYNVRGVQLNVDDKGTLDCILRARLEALLARASGIPTLPWEDCQ"
     gene            28738..29646
                     /gene="citE"
                     /locus_tag="JN001_000613"
     CDS             28738..29646
                     /gene="citE"
                     /locus_tag="JN001_000613"
                     /EC_number="4.1.3.34"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415149.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (pro-3S)-lyase subunit beta"
                     /protein_id="HAY9051943.1"
                     /translation="MISASLQQRKTRTRRSMLFVPGANAAMVSNSFIYPADALMFDLE
                     DSVALREKDTARRMVYHALQHPLYRDIETIVRVNALDSEWGVNDLEAVVRGGADVVRL
                     PKTDTAQDVLDIEKEILRIEKACGREPGSTGLLAAIESPLGITRAVEIAHASERLIGI
                     ALGAEDYVRNLRTERSPEGTELLFARCSILQAARSAGIQAFDTVYSDANNEAGFLQEA
                     AHIKQLGFDGKSLINPRQIDLLHNLYAPTQKEVDHARRVVEAAEAAAREGLGVVSLNG
                     KMVDGPVIDRARLVLSRAELSGIREE"
     gene            29657..31189
                     /gene="citF"
                     /locus_tag="JN001_000614"
     CDS             29657..31189
                     /gene="citF"
                     /locus_tag="JN001_000614"
                     /EC_number="2.8.3.10"
                     /EC_number="4.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase subunit alpha"
                     /protein_id="HAY9051944.1"
                     /translation="MTQKIEQSQRQERVAAWNRRAECDLAAFQNSPKQTYQAEKARDR
                     KLCANLEEAIHRSGLQDGMTVSFHHAFRGGDLTVNMVMDVIAKMGFKNLTLASSSLSD
                     CHAPLVEHIRQGVVTRIYTSGLRGPLAEEISRGLLAEPVQIHSHGGRVHLVQSGELNI
                     DVAFLGVPSCDEFGNANGYTGKACCGSLGYAMVDADNAKQVVMLTEELLPYPHNPASI
                     EQEQVDLIVKVDRVGDAAKIGAGATRMTTNPRELLIARSAADVIVNSGYFKEGFSMQT
                     GTGGASLAVTRFLEDKMRSRDIRADFALGGITATMVDLHEKGLIRKLLDVQSFDSHAA
                     QSLARNPNHIEISANQYANWGSKGASVDRLDVVVLSALEIDTQFNVNVLTGSDGVLRG
                     ASGGHCDTAIASALSIIVAPLVRGRIPTLVDNVLTCITPGSSVDILVTDHGIAVNPAR
                     PELAERLQEAGIKVVSIEWLRERARLLTGEPQPIEFTDRVVAVVRYRDGSVIDVVHQV
                     KE"
     gene            31193..31743
                     /gene="citX"
                     /locus_tag="JN001_000615"
                     /pseudo
     CDS             31193..31743
                     /gene="citX"
                     /locus_tag="JN001_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308680.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="citrate lyase holo-[acyl-carrier protein]
                     synthase"
     gene            31718..32566
                     /gene="citG"
                     /locus_tag="JN001_000616"
     CDS             31718..32566
                     /gene="citG"
                     /locus_tag="JN001_000616"
                     /EC_number="2.4.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triphosphoribosyl-dephospho-CoA synthase CitG"
                     /protein_id="HAY9051945.1"
                     /translation="MSMPATSTKTTKLATSLIDEYALLGWRAMLTEVNLSPKPGLVDR
                     INCGAHKDMALEDFHRSALAIQGWLPRFIEFGACSAEMAPEAVLHGLRPIGMACKGDM
                     FRATAGVNTHKGSIFSLGLLCAAIGRLLQLNQSLTPTTVCSTAASFCRGLTDRELRTN
                     NSQLTAGQRLYQQLALTGARGEAEAGYPLVINHALPHYLTLLDQGLDPELALLDTLLL
                     LMAINGDTNVASRGGEGACAGYSARRKHYCKKGAFEPPPISIISGSSTGSVSNEISVQ
                     AAVPTC"
     gene            32646..34109
                     /gene="citT"
                     /locus_tag="JN001_000617"
     CDS             32646..34109
                     /gene="citT"
                     /locus_tag="JN001_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate/succinate antiporter CitT"
                     /protein_id="HAY9051946.1"
                     /translation="MSLAKDNIWKLLAPLVVMGVMFLIPVPNGMPPQAWHYFAVFVAM
                     IVGMILEPIPATAISFIAVTICVIGSNYLLFDAKELADPAFNAQKQALKWGLAGFSST
                     TVWLVFGAFIFALGYEVSGLGRRIALFLVKFMGKRTLTLGYAIVIIDILLAPFTPSNT
                     ARTGGTVFPVIKNLPPLFKSFPNDPSARRIGGYLMWMMVISTSLSSSMFVTGAAPNVL
                     GLEFVSKIAGIQISWLQWFLCFLPVRVILLIIAPWLSYVLYKPEITHSEEVATWAGDE
                     LKTMGALTRREWTLIGLVLLSLGLWVFGSEVINATAVGLLAVSLMLALHVVPWKDITR
                     YNSAWNTLVNLATLVVMANGLTRSGFIDWFAGTMSTHLEGFSPNATVIVLVLVFYFAH
                     YLFASLSAHTATMLPVILAVGKGIPGVPMEQLCILLVLSIGIMGCLTPYATGPGVIIY
                     GCGYVKSKDYWRLGAIFGVIYISMLLLVGWPILAMWN"
     gene            34220..35026
                     /gene="rna"
                     /locus_tag="JN001_000618"
     CDS             34220..35026
                     /gene="rna"
                     /locus_tag="JN001_000618"
                     /EC_number="4.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease I"
                     /protein_id="HAY9051947.1"
                     /translation="MKEFWRNAALLAVSLLPFSSANAVALQAKQYGDFDRYVLALSWQ
                     TGFCQSQHDRNRNERDECRLQTETTNKADFLTVHGLWPGLPKSVAARGVDERRWMRFG
                     CATRPIPNLPEAHASRMCSSPETGLSLETAAKLSEVMPGAGGRSCLERYEYAKHGACF
                     GFDPDAYFGTMVRLNQEIKESEAGKFLADNYGKTVSRRDFDAAFAKSRGKENVKAVKL
                     TCQGNPAYLTEIQISIKADAINAPLSANSFLPQPHPSNCGKTFVIDKVGY"
     gene            35256..35666
                     /gene="rnk"
                     /locus_tag="JN001_000619"
     CDS             35256..35666
                     /gene="rnk"
                     /locus_tag="JN001_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside diphosphate kinase regulator"
                     /protein_id="HAY9051948.1"
                     /translation="MSRPTIIINDLDAERIDILLEQPAYAGLPIADALNAELDRAQMC
                     SPEEMPHDVVTMNSRVKFRNLSDGEVRVRTLVYPAKMTDSNTQLSVMAPVGAALLGLR
                     VGDSIHWELPGGVATHLEVLELEYQPEAAGDYLL"
     gene            complement(35897..37134)
                     /locus_tag="JN001_000620"
                     /pseudo
     CDS             complement(35897..37134)
                     /locus_tag="JN001_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308674.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent formaldehyde
                     dehydrogenase"
     gene            37355..37783
                     /gene="uspG"
                     /locus_tag="JN001_000621"
     CDS             37355..37783
                     /gene="uspG"
                     /locus_tag="JN001_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspG"
                     /protein_id="HAY9051949.1"
                     /translation="MYKTIIMPVDVFEMELSDKAVRHAEFLTQDDGVIHLLHVLPGSA
                     SLSLDRFAADVRRFEEHLQHEAEERLQTMVSHFTIDPSRIKQHVRFGSVRDEVNELAE
                     ELGADVVVIGSRNPSISTHLLGSNASSVIRHANLPVLVVR"
     gene            complement(37904..39469)
                     /gene="ahpF"
                     /locus_tag="JN001_000622"
     CDS             complement(37904..39469)
                     /gene="ahpF"
                     /locus_tag="JN001_000622"
                     /EC_number="1.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415139.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit F"
                     /protein_id="HAY9051950.1"
                     /translation="MLDTNMKTQLKAYLEKLTKPVELIATLDDSAKSAEIKELLAEIA
                     ELSDKVTFKEDNSLPVRKPSFLITNLGSNQGPRFAGSPLGHEFTSLVLALLWTGGHPS
                     KEAQSLLEQIRHIDGDFEFETYYSLSCHNCPDVVQALNLMSVLNPRIKHTAIDGGTFQ
                     NEITDRNVMGVPAVFVNGKEFGQGRMTLTEIVAKIDTGAEKRAAEELNKRDAYDVLIV
                     GSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVH
                     VDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGE
                     DQYRTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA
                     DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIG
                     LLPNTNWLEGAVERNRMGEIIIDAKCETNVKGVFAAGDCTTVPYKQIIIATGEGAKAS
                     LSAFDYLIRTKTA"
     gene            complement(39640..40203)
                     /gene="ahpC"
                     /locus_tag="JN001_000623"
     CDS             complement(39640..40203)
                     /gene="ahpC"
                     /locus_tag="JN001_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003858764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl hydroperoxide reductase subunit C"
                     /protein_id="HAY9051951.1"
                     /translation="MSLINTKIKPFKNQAFKNGEFIEITEKDTEGRWSVFFFYPADFT
                     FVCPTELGDVADHYEELQKLGVDVYAVSTDTHFTHKAWHSSSETIAKIKYAMIGDPTG
                     ALTRNFDNMREDEGLADRATFVVDPQGIIQAIEVTAEGIGRDASDLLRKIKAAQYVAS
                     HPGEVCPAKWKEGEATLAPSLDLVGKI"
     gene            40515..>40981
                     /gene="dsbG"
                     /locus_tag="JN001_000624"
     CDS             40515..>40981
                     /gene="dsbG"
                     /locus_tag="JN001_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706462.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbG"
                     /protein_id="HAY9051952.1"
                     /translation="MTVIGYAFYSTFALTEKDKLMLKKILLLALLPAIAFAEELPAPV
                     KAIEKQGITIIKTFDAPGGMKGYLGKYQDMGVTIYLTPDGKHAISGYMYNEKGENLSN
                     TLIEKEIYAPAGREMWQRMEQSHWLLDGKKDAPVIVYVFADPFCPYCKQFWQQA"
BASE COUNT        10185 a        10478 c        10067 g        10251 t
ORIGIN      
        1 cttccccaca gcacatagcg gtttgggcaa cgaattgggt ataaatcaac cctctctccg
       61 agccaccagc aattaatgct ttccactctt caggggaaga gcgatgccat gtcagatata
      121 agccagctaa atcattggca tgaccatcat cagtcatctg ataaatagtc tgaattaaat
      181 catcacgatt atttattccc caggatgatg agagatcgaa ttcttttata ccggtataca
      241 tttttggcga gtcatgcgcg ggtttgcaac cctgattaag tatttccatg ggcgcagaaa
      301 gcgcaaaaag aagatattgt tcttccttat tcatttgtta ataatccctt aagtgcatta
      361 actgactact tttttatatt acttgccggg ctttccgcac attaacgtcg actgtcaccc
      421 gaacagatgg agtattttcc ctatcaaacc ggcaaagata aaaatgtaga aaataatttt
      481 gatgacgccc agacagcccg gcccaccatc gtcaacgggc attggctgcg gttgcggctc
      541 cggttcaaca gtttgcttct cggtaaaatt cgccgcctga attaataatc gacgaataat
      601 taatgcttcc agtggacaac gatcttctgc atcaagacgg cttacgatcg gcattaatga
      661 ttcttctgtc ggttggctgg cctgcactaa ttgtttggca actaaatata atggccataa
      721 gagatgttct gtatcacgcg tgagtgagat ccgcggctta cgtcctttgt gcaaaaccat
      781 ctcgaccagt gaacgcccca gcgcagagag tttttcatcg ctgagtattt cgtataaatg
      841 aaaacgcgta cgggcgctgt cgccggggac ataaagtagc tgtttaccct gatcgttaac
      901 cagttcacga gcttcaatca tcatcaccac taacgggtaa taatcgaccc gatgctgacg
      961 gcaccattgc aatattaaag catccgcctg ggtggaggga tactcgcgcc agtagtcaca
     1021 aagttctgcc agcaagcttt cgccttctcc acaatagacg cgttgcgcgt attcataata
     1081 acgcgcatct tcattatcag gttcagcttc ccgccacgac cgggcgtaat ccagaagttc
     1141 ggggatatcc aggcgacctg cgctatacca gcggagtaaa tttctgtgca gttttgcatc
     1201 atcggggatg atcactgcgc gatgttgcgc taaatacaat gtcagccatt ctggatgcga
     1261 tgaccaaatc cgagcgaaca tttggtaaaa atcgatggtg tcattttgca cggcaacggg
     1321 cagatgcaga atggtctgga agttaaaaac attccccttc gcaatggcat ataaaaagga
     1381 ttccagttct tcttcgtcta tttccccgac gttttcctcc tgcaaccacc gcaatctttc
     1441 tgctaataac accacgcact cgaaggataa atgggcagtg ttcatggcga ttgtgcacag
     1501 cgaccagcgt aattcatcaa tctcttccat cgagcaataa tttaattgct gaatgaatcg
     1561 ctgccaggcg gagggcagaa aacgttcgct atcagaggca agtaacgcgc gaaaggcgag
     1621 cagaatttca tgttctgcta cctcatattc ttctggttgc caaacagatt tagcaggcga
     1681 ctgcgcaatc cgtagcgcct cctcatacgc ctgacgaagt tgtttaaaac cctgcggttc
     1741 ggtttctgga tgaaaggacg gtaacagcgc cagataagcg cggcggataa tatcgacgtc
     1801 agtcgtttcc tctatatcga ggatcttcca gcaatttttc ataagtcgct catatcctta
     1861 agcgtttccg ggcatgtggg gtagtcagcc agtggttgcc aggacaaggt agggtaatac
     1921 gcatcatcac tggcaaataa ttgataaaac atatcattgc cggaatcgtc gtattcttta
     1981 cgcgctaaga attcgcgtaa taaaggcaga tgatcatctt cgggagactg ccaatattgc
     2041 cgaccaaagg tataaccggc aaagtattgc cgccagttac tataataacg tagagcccgt
     2101 agatgaatac gcgactggat ccatagactt tcttcttcac tcaaccagtt attaagtacg
     2161 cccattcgac ttaaaaaacc catccggaca taatcccatg ctttaattcc tccctcacca
     2221 cagcattcgg ctgtgctggc gacaaattgc gcataagcct gaccttgctc atttaattca
     2281 gcaagatagt cacgccattc acatggagaa taacgaaacc agcggtgata aaaccctgcc
     2341 aaccgagcgg catgaccgtt ctcgatcatt cggtgaattg tgcgcagcag gtcatcacgg
     2401 tcatcaattc cccatgagga agaaaggtca aaaaagcatg tacctaaata cattttgggg
     2461 gatgaatgcg aaggtaaaca gcattcattg cgtatttcca tcggagtgga aagtgcaaac
     2521 aatatttttt gcgaccccat gtccatataa tttatcctta aacattcatt taatgaatgt
     2581 aaactacatt tcgagactca gttatttata cttttctgac gcgacataat acgcataaaa
     2641 taaggcttac gcaaaaatgg aacacataaa atataatatg ttttatctac aaccataagg
     2701 aaatgataat gatttttacg tcaagttgct gcgataattt atcaatagat gagattatcg
     2761 aacgtgctga aaaaggcgat tgcgaggctc aatatattgt tgggttttat tataatcgcg
     2821 atagcgcaat tgactctccg gacgacgaaa aggcctttta ctggctgaag ctggccgccg
     2881 agcaaggtca ttgtgaagca caatattcct taggacaaaa gtatactgag gataaaagcc
     2941 gtcataaaga taatgagcat gccatctttt ggctgaaaaa aactgcccta caaggccata
     3001 ctttcgcttc caacgccctt ggctggatac tggatcgtgg agaagacccc aattataaag
     3061 aagcggttgt ctggtatcag atagccgcgg agagcggaat gtcttatgcg caaaataatc
     3121 ttgggtggat gtacagaaat ggcaacggag tcgcaaaaga ctatgcgctg gcatttttct
     3181 ggtacaaaca agctgcatta caaggccata gtgacgcgca aaacaatctg gccgatcttt
     3241 atgaagacgg aaaaggcgtt gctcaaaaca agacactcgc cgcattctgg tatttgaaaa
     3301 gcgcacagca gggtaatcgg cacgcccagt ttcaaattgc atgggattat aacgctggcg
     3361 aaggggtgga ccaggactat aagcaagcga tgtactggta tctgaaggct gccgctcagg
     3421 aaagcgtcgg cgcttacgtc aacatcggtt atatgtataa acacggacaa ggcgttgaga
     3481 aagattatca ggctgccttt gaatggttta cgaaagccgc tgaatgcaat gacgccactg
     3541 cctggtataa cctggccatt atgtatcact acggagaagg aagacctgtc gatctccgac
     3601 aggctctcga cctgtatcgt aaagttcagt catccggaac cagagatgtc agtcaggaaa
     3661 ttcgtgagac tgaagattta ctgtagagat aaaaacaagg gccggggaat ttcattcggc
     3721 ccatattctc tttattgctg tgcgaaatca gactattacg gctcaaacgg gcgtctctgg
     3781 aactggtcat gaccacattt cgggcatagc gtcagcactt ccggtgtgta gatcgggaga
     3841 tggaagtgac atttctcgca gaccagattt cccagcccga ccacttctcc gctgtgataa
     3901 accccatgat gattgaggtc ctggaaaact tcgcgccatt caagctgcgt tttatcggtg
     3961 atatctgcca gctcctgcca taagctttct ttaatcaccc gcataaagac gctgtcagat
     4021 tcttctttca ggctctcttc atagctcatg gcgaactctt ccaggtcacg tcttacagct
     4081 cgcgtcagct catcgacctc ggttcgcgtt aactcccctg tttttattac gcgctcgcgc
     4141 gcctgttcca ccagtgcgtc gatatcacgt tcgccattgc gcaggcgttc gctcagtgac
     4201 gcgaccagtt cacggtaata ttgagcaacc ttgttcatcg tttcatctcc cgggtcgtta
     4261 actgactata ataatagacg ttctttgttc cttgctttgc taatacgccc acaaactctg
     4321 taaattaatg tatgaataat ccgggcatca tttcaacgtc gagtgcgcga aaggctgttt
     4381 tgacgcggac gtttgggcta tgctatgcgg atctgaaaaa ccacctcaac gctacatttg
     4441 tagccgtatt gaaaacagga ccactggctg ccatgcaaga gcaataccgc ccggaagaga
     4501 tagaatccaa agtacagctt cattgggatg agaagcgcac atttgaagta accgaagacg
     4561 agagcaaaga gaagtattac tgcctgtcta tgcttcccta tccttctggt cgactacaca
     4621 tgggccacgt acgtaactac accatcggtg acgtgatcgc ccgctaccag cgtatgctgg
     4681 gcaaaaacgt cctgcagccg atcggctggg acgcgtttgg tctgcctgcg gaaggcgcgg
     4741 cggtgaaaaa caacaccgct ccggcaccgt ggacgtacga caacatcgcg tatatgaaaa
     4801 accagctcaa aatgctgggc tttggttatg actggagccg cgagctggca acctgtacgc
     4861 cggaatacta ccgttgggaa cagaaattct tcaccgagct gtataaaaaa ggcctggtat
     4921 ataagaagac ttctgcggtc aactggtgcc cgaacgacca gaccgtactg gcgaacgaac
     4981 aagttatcga cggctgctgc tggcgctgcg ataccaaagt tgaacgtaaa gagatcccgc
     5041 agtggtttat caaaatcact gcttacgctg acgagctgct caacgatctg gataaactgg
     5101 atcactggcc agacaccgtt aaaagcatgc agcgtaactg gatcggtcgt tccgaaggcg
     5161 tggagatcac cttcaacgtt aacgactatg acaacacgct gaccgtttac actacccgcc
     5221 cggacacctt tatgggttgt acctacctgg cggtagctgc gggtcatccg ctggcgcaga
     5281 aagcggcgga aaataatcct gaactggcgg cctttattga cgaatgccgt aacaccaaag
     5341 ttgccgaagc tgaaatggcg acgatggaga aaaaaggcgt cgatactggc tttaaagctg
     5401 ttcacccatt aacgggcgaa gaaattcccg tttgggcagc aaacttcgta ttgatggagt
     5461 acggcacggg cgcagttatg gcggttccgg gtcacgacca gcgcgactac gagtttgcct
     5521 ctaaatacgg cctgaacatc aaaccagtta tcctggctgc tgacggctct gagccagatc
     5581 tttctcagca agcactgact gaaaaaggcg tgctgttcaa ctctggcgaa ttcaacggtc
     5641 ttgaccatga agcggccttc aacgccatcg ccgataaact gactgcgatg ggcgttggcg
     5701 agcgtaaagt gaactaccgc ctgcgcgact ggggtgtttc tcgtcagcgt tactggggcg
     5761 cgccgattcc gatggtgacg ctggaagacg gtaccgtaat gccgaccccg gacgaccagc
     5821 tgccggtgat cctgccggaa gatgtggtga tggacggcat taccagcccg attaaagcag
     5881 atccggagtg ggcaaaaact accgttaacg gtatgccagc gctgcgtgaa accgacactt
     5941 tcgacacctt tatggagtcc tcctggtact atgcgcgcta cacttgccca gagtacaaag
     6001 aaggtatgct ggattccgaa gcggctaact actggctgcc ggtggatatc tacattggtg
     6061 gtatcgaaca cgccattatg cacctgctct acttccgctt cttccacaaa ctgatgcgtg
     6121 atgcaggcat ggtgaactct gacgaaccag cgaaacagtt gctgtgtcag ggtatggtgc
     6181 tggcagatgc cttctactat gttggcgaaa acggcgaacg taactgggtt tccccggttg
     6241 atgctatcgt tgaacgtgac gagaaaggcc gtatcgtgaa agcgaaagat gcggcaggcc
     6301 atgaactggt ttataccggc atgagcaaaa tgtccaagtc gaagaacaac ggtatcgacc
     6361 cacaggtgat ggttgaacgt tacggcgcgg acaccgttcg tctgtttatg atgtttgctt
     6421 ctccggctga tatgactcta gaatggcagg aatccggtgt ggaaggggct aaccgcttcc
     6481 tgaaacgtgt ctggaaactg gtttacgagc acacagcaaa aggtgatgtt gcggcactga
     6541 acgttgatgc gctgactgaa gatcagaaag cgctgcgtcg cgatgtgcat aaaacgatcg
     6601 ctaaagtgac cgatgatatc ggccgtcgtc agaccttcaa caccgcaatt gcggcgatta
     6661 tggagctgat gaacaaactg gcgaaagcac caaccgatgg cgagcaggat cgcgctctga
     6721 tgcaggaagc gctgctggcc gttgtccgta tgcttaaccc gttcaccccg cacatctgct
     6781 tcacgctgtg gcaggaactg aaaggcgaag gcgatatcga caacgcgccg tggccggttg
     6841 ctgacgaaaa agcgatggtg gaagactcca cgctggtcgt ggtgcaggtt aacggtaaag
     6901 tccgtgccaa aatcaccgtt ccggtggacg caacggaaga acaggttcgc gaacgtgctg
     6961 gccaagaaca tctggtagca aaatatcttg atggcgttac cgtgcgtaaa gtgatttacg
     7021 taccaggtaa actcctcaat ctggtcgttg gctaagcgcg ggaggaagcg tgcgatatct
     7081 ggcaacattg ttgttatctc tggcggtgtt aatcaccgcc gggtgtggct ggcatctgcg
     7141 tgataccacg caggttcctt ccactatgaa ggtcatgatc ctggactcag gcgatccgaa
     7201 cgggccatta agccgtgcgg tgcgtaacca gttacgtctg aatggtgtcg agttgcttga
     7261 taaagaaacc acgcgtaagg acgttccatc cctgcgtttg ggtaaagtga gcatcgcgaa
     7321 agataccgca tcggtattcc gtaacggtca aacagcagag tatcagatga tcatgacggt
     7381 gaatgcgacc gtgttgatcc ccggccgtga tatctacccg attagcgcca aagtcttccg
     7441 ttcgttcttt gataacccgc aaatggcgtt agcgaaagat aacgaacaag acatgatcgt
     7501 aaaagagatg tacgaccgtg ctgccgaaca gctgattcgt aagctgccaa gcatccgtgc
     7561 tgcggatatt cgttccgacg aagaacagac gtcgaccaca acggatactc cggcaacgcc
     7621 tgcacgcgtc tccaccacgc tgggtaactg atgattcggt tgtacccgga acaactccgc
     7681 gcgcagctca atgaagggct gcgcgcggcg tatcttttac ttggtaacga tcctctgtta
     7741 ttgcaggaaa gccaggacgc tgttcgtcag gtagctgcgg cacaaggatt cgaagaacac
     7801 cacacttttt ccattgatcc caacactgac tggaatgcga tcttttcgtt atgccaggct
     7861 atgagtctgt ttgccagtcg acaaacgcta ttgctgttgt taccagaaaa cggaccgaat
     7921 gcggcgatca atgaacaact tctcacactc accggacttc tgcatgacga cctgctgttg
     7981 atcgtccgcg gtaataaatt aagcaaagcg caagaaaatg ccgcctggtt tactgcgctt
     8041 gcgaatcgca gcgtgcaggt gacctgtcag acaccggagc aggctcagct tccccgctgg
     8101 gttgctgcgc gcgcaaaaca gctcaactta gaactggatg acgcggcaaa tcaggtgctc
     8161 tgctactgtt atgaaggtaa cctgctggcg ctggctcagg cactggagcg tttatcgctg
     8221 ctctggccag acggcaaatt gacattaccg cgcgttgaac aggcggtgaa tgatgccgcg
     8281 catttcaccc cttttcattg ggttgatgct ttgttgatgg gaaaaagtaa gcgcacattg
     8341 catattcttc agcaactgcg tctggaaggc agcgaaccgg ttattttgtt gcgcacatta
     8401 caacgtgaac tgttgttact ggttaacctg aaacgccagt ctgcccatac gccactgcgt
     8461 gcgttgtttg ataagcatcg ggtatggcag aaccgccggg gcatgatggg cgaggcgtta
     8521 aatcgcttaa gtcagacgca gttacgtcag gccgtgcaac tcctgacacg aacggaactc
     8581 accctcaaac aagattacgg tcagtcagtg tgggcagagc tggaagggtt atctcttctg
     8641 ttgtgccata aacccctggc ggacgtattt atcgacggtt gatatgaaat ctttacaggc
     8701 tctgtttggc ggcacctttg atccggtgca ctatggtcat ctaaaacccg tggaaacgct
     8761 ggcgaatttg attggtctga cgcgggtcac aatcatccct aataatgttc ctccgcatcg
     8821 tccccagccg gaagcgaaca gcgtgcagcg taaacacatg cttgaactgg cgattgccaa
     8881 caagccatta tttactcttg atgaacgcga gctaaagcgc aatgccccct cttacactgc
     8941 gcaaacactg aaagagtggc ggcaggaaca aggaccggac gtgccgctgg cgtttattat
     9001 tggtcaggat tcactgctga cctttccgac ctggtacgaa tacgaaacga tactcgacaa
     9061 tgcacatttg atcgtctgtc ggcgtccagg ttacccactt gaaatggcgc aaccgcaata
     9121 ccagcaatgg ctggaagatc atttgacaca taaccaggaa gatcttcacc ttcagcctgc
     9181 cggtaaaatt tatctggctg aaacgccgtg gtttaacatc tcggcgacca tcatccgcga
     9241 acgtttgcaa aacggtgaat cgtgtgagga tttattgccg gaaccggtac tgacttacat
     9301 taaccaacaa ggcttgtatc gctgatacct gtcgttacgg agggcatgat gcgactgtgg
     9361 ttaattcgtc atggtgaaac gcaagcgaat atcgatggtc tttacagcgg tcatgcgccc
     9421 cccccctgac cgcgcgcggt attgagcaag cgcaaaatct gcatacgctg ctacatggtg
     9481 tttcctttga tctggtttta tgcagtgaac tggaacgggc acagcatacc gcgcgactgg
     9541 ttctcagtga ccgccagctc cccgtgcaaa tcatccctga actcaacgaa atgttttttg
     9601 gcgactggga gatgcgacat catcgcgacc tcatgcaaga agatgccgaa aactatagcg
     9661 cgtggtgcaa tgactggcag catgcaatcc ccacgaacgg tgaaggattt caggcatttt
     9721 cgcaacgtgt ggaacgcttt atcgcaaggc ttagtgaatt tcagcactat cagaatattt
     9781 tagtcgtcag ccatcagggt gtactgagtc tgttaatcgc ccgtttaatt ggcatgcctg
     9841 ccgaggctat gtggcatttt cgcgttgacc aggggtgttg gagcgccatt gatatcaacc
     9901 aaaaattcgc gacgctacgc gtcctcaata gccgtgccat cggggtcgat aatgcatgac
     9961 ttttctgttt ttttacgggt aagccgcaac gaccattgac agacccgggc aggctgatat
    10021 tctccgcagc cagacttttt tcgccagaca cgactttgta gaaattgttt tacaaaaatg
    10081 gcgatgcaat ctgcggcgcg gggtgggatg atagcccact ttcgaaagcc gattcggcga
    10141 caattgtccc gaaatcgcct ctggttcagg tatactgaca gaccattttt atctatttga
    10201 ttcacccagg gggaaaactt gcagggtaaa gcactccagg attttgttat cgacaaaatt
    10261 gatgacctca aaggtcagga catcatcgcc ttagacgttc aaggcaaatc cagcatcacc
    10321 gactgcatga tcatctgtac gggtacgtcc agccgtcatg ttatgtccat tgctgaccac
    10381 gttgtgcagg agtctcgcgc agcgggcctg ttaccgctcg gcgtagaagg tgaaaacagc
    10441 gccgactgga ttgtcgtgga tttgggcgat gtgattgtcc atgtcatgca ggaagagagc
    10501 cgtcgcctgt atgaactgga aaaactctgg agttaatgcg tgaagctgca acttgtcgcc
    10561 gtgggaacga aaatgccgga ctgggtacaa accggtttta ccgagtacct gcgtcgtttt
    10621 ccgaaagata tgcccttcga gctgattgaa attccggccg gaaaacgcgg caagaatgcg
    10681 gacatcaagc gcatactcga caaagagggt gagcagatgt tggcggccgc aggcaaaaac
    10741 cgcattgtca ccctcgatat tccaggcaag ccctgggata cgccgcagtt agccgctgag
    10801 ctggaacgct ggaagctgga tggtcgcgac gtcagtctac tgattggcgg gcctgaaggg
    10861 ttgtcgcctg cctgtaaagc ggcggcggag cagagctggt cgctgtcggc gcttaccctc
    10921 ccccatccgc tggttcgcgt gctggtcgca gagagtctgt accgggcgtg gagcatcacc
    10981 accaaccatc cttatcaccg tgagtgataa gggagctttg agtagaaaac gcagcggatg
    11041 aaactacaga actcttttcg cgactatacg gcagagtccg cgctgtttgt gcgccgggcg
    11101 ctggtcgcct ttttggggat tttgctgctg accggcgtgc ttatcgccaa cctgtataat
    11161 ctgcaaattg ttcgctttac cgactaccag acccgctcta atgaaaaccg cattaagctg
    11221 gtgcctatcg cgcccagccg cggcattatt tacgaccgta atggtatccc tctggccctc
    11281 aaccgcacta tctaccagat agaaatgatg ccagagaaag tcgataacgt gcagcaaacg
    11341 ctggacgctt tgcgcagcgt ggttgatctg accgatgacg atattgctgc attccgaaaa
    11401 gagcgcgcac gttcacaccg tttcacctct attcccgtga aaactaacct gaccgaagta
    11461 caagtagctc gctttgccgt caatcagtac cgttttccgg gggttgaagt taaaggctat
    11521 aaacgtcgtt actatcctta cggttcggcg ttgacccacg tcatcggcta tgtgtcgaaa
    11581 atcaacgata aagacgtcga acgcctgaat aatgacggca aactggccaa ctatgcggca
    11641 acgcatgata tcggtaagct gggcattgag cgttactatg aagacgtgct gcacggtcag
    11701 accggttatg aagaggttga agttaacaac cgtgggcgtg ttatccgcca gttaaaagaa
    11761 gtaccaccgc aagccggaca cgatatttac ctgacgctgg atctcaaact ccagcaatat
    11821 attgaaacgc tgctggcggg tagccgcgca gctgtggtag tcaccgatcc gcgtacaggt
    11881 ggggtgctgg cgctggtttc cacgcctagt tatgacccaa acttgtttgt tgacggtatc
    11941 tccagcaaag attattccgc cttgttgaac gacccgaata caccgctggt gaaccgcgcc
    12001 acacaggggg tttatcctcc cgcgtctaca gttaaaccct atgtggcggt ttcggcattg
    12061 agcgccgggg tgatcacgcg caatacgacg ctgtttgacc caggctggtg gcaactgcca
    12121 ggttcggaaa aacgttatcg tgactggaaa aaatggggcc acgggcgtct gaatgtcaca
    12181 agatcgctgg aagaatctgc ggataccttc ttctatcagg tggcctacga tatggggatc
    12241 gatcgcctct ccgaatggat gggtaaattc ggttatggtc attacaccgg tatcgacctg
    12301 gcggaagaac gttccggcaa catgcctacc cgcgaatgga aacagaaacg ctttaaaaaa
    12361 ccgtggtatc agggtgacac cattccggtt ggtatcggtc agggttactg gacagcgacc
    12421 ccaatccaga tgagtaaggc actgatgatc ctgattaatg acggtatcgt gaaggttccg
    12481 catttgctga tgagcaccgc cgaagacggc aaacaggtgc catgggtaca accgcatgaa
    12541 ccgcccgtcg gcgatattca ttccggttac tgggagctgg cgaaagacgg tatgtacggt
    12601 gttgctaacc gccctaacgg tacgacgcat aaatactttg ccagcgcacc gtacaaaatt
    12661 gcggcgaaat ctggtaccgc tcaggtcttc ggtctgaaag cgaacgaaac ctataatgcg
    12721 cacaaaattg ccgagcgttt acgtgaccac aaactgatga ccgcctttgc gccatacaac
    12781 aatccgcaag tggctgtcgc catgattctg gagaacggcg gcgcgggtcc ggcggttggt
    12841 acgctgatgc gtcagatcct cgaccacatt atgctgggtg ataacaacac cgatctgcct
    12901 gcggaaaatc cagcggttgc cgcagcggag gaccattaat catgacggat aatccgaata
    12961 aaaaaacatt ctgggataaa gtccatctcg atcccacaat gctgctgatc ttactggcat
    13021 tgctggttta cagcgcccta gttatctgga gcgccagcgg tcaggatatt ggcatgatgg
    13081 agcgtaaaat cggccaaatc gcgatgggtc tggtcatcat ggtggtgatg gcgcaaattc
    13141 ctccacgcgt ttatgaaggc tgggccccct atctctatat catctgtatt attttgctgg
    13201 tggcggtaga tgctttcggt gccatctcta aaggtgctca acgctggctg gacctcggta
    13261 ttgttcgttt tcagccgtcg gaaattgcca aaatagccgt accactgatg gttgcgcgct
    13321 ttatcaaccg cgacgtttgc ccaccgtcgt tgaagaacac aggcatcgcg ctggtgctga
    13381 tatttatgcc cacgctgctg gtggctgcac agcctgacct gggaacatca atcctcgttg
    13441 cgctttccgg tctgtttgta ctgttcctct ctggccttag ctggcgtctg attggcgtcg
    13501 cagtagtgct ggtggcggcg ttcattccta ttctgtggtt cttcctgatg catgattacc
    13561 agcgccagcg cgtaatgatg ctcctagacc cggaatcaga cccactcggc gcgggctatc
    13621 acattattca gtctaaaatt gctattggct ccggcggatt acgcggcaaa ggctggctgc
    13681 atggcactca gtcacaactt gaatttctac ccgaacgcca taccgacttt atcttcgcgg
    13741 tactggcgga agagctggga ttagtgggca ttttgattct gctcgctctc tacattctgc
    13801 tgatcatgcg cgggctgtgg atagccgcca gagcgcaaac cacctttggt cgcgtcatgg
    13861 ctggcggctt aatgctgata ttattcgttt atgtcttcgt aaatattggt atggtaagcg
    13921 gtattctgcc ggttgtaggg gttccgctcc cactggtcag ttatggagga tcagcgctaa
    13981 ttgtgctgat ggctgggttc gggattgtaa tgtcaatcca cacccacagg aaaatgttgt
    14041 cgaaaagcgt gtaagaggtg cgcaatgcgt aagcagtggc tcgggatctg catcgcggca
    14101 ggaatgctcg cggcatgtac aagcgatgat ggtcagcaac agacggtaag tgtaccgcag
    14161 cctgcggtat gtaacggccc catagttgaa attagcgggg cggacccgcg tttcgaacca
    14221 ctgaacgcga cggcaaatca ggattaccag cgcgacggta aaagctacaa aatcgtgcag
    14281 gatccgtctc gatttagcca ggcgggactg gcggcaatct atgatgccga accaggcagt
    14341 aacctgacgg cctctggcga agctttcgat ccgacacagc tgacggcggc ccatccaacg
    14401 cttccgatcc ccagctacgc cagaatcact aacctggcta acgggcgaat gatcgtggtg
    14461 cgcattaatg atcgcggccc ttacggcaac gaccgcgtta tttcgctttc tcgcgcggca
    14521 gctgaccgtc ttaacacgtc aaacaacacc aaagttcgta tcgatccgat tattgtcgcc
    14581 caggatggtt cgctttctgg tcctggtatg gcttgtacca cagtcgccaa acagacttac
    14641 gccctgcctg cacctcccga tttaagcggt ggcgcgggaa caagttcagt gtctggcccg
    14701 cagggtgaca ttcttccggt cagtaattcg acgctaaaaa gcgaagatcc gaccggcgcg
    14761 ccggtaacca gtagcggttt cctcggcgca ccaacgacct tagcgcctgg tgtactggaa
    14821 ggcagcgaac cgacgcctgc gccacagccc gttgttacag ctccgtcgac aacgcctgca
    14881 acctcgcctg caatggtgac accgcaagcc gcctcgcaaa gcgccagcgg caactttatg
    14941 gtgcaagtcg gggccgttag cgatcaggct cgtgcgcaac agtaccaaca gcaactggga
    15001 cagaagttcg gcgtccccgg tcgcgtaact caaaatggcg cggtctggcg gatccagctt
    15061 ggccccttcg ccagcaaagc cgaagccagt accttgcagc aacgtttgca aaccgaagcc
    15121 caattacagt catttattac caccgcgcag tagcgtaaag caggcatctg atgtgtcaat
    15181 ttctgtaaat gacgttaaca aagtcacgcg gaaagtcaga tgcctgccgg tagtgcattt
    15241 gctatagtag ggcacttttt ttaattccat cacggatgtc gtagttcaga ccatgaatac
    15301 cattttttcc gctcgtatca tgaagcgcct ggcgctcacc acggctcttt gcacagcctt
    15361 tatctctgct gcacatgccg atgacctgaa tatcaaaact atgatcccgg gtgtaccgca
    15421 gatcgatgcg gagtcctaca tcctgattga ctataactcc ggcaaagtgc tcgccgaaca
    15481 gaacgcagat gtccgccgcg atcctgccag cctgaccaaa atgatgacca gttacgttat
    15541 cggccaagca atgaaagccg gtaaatttaa agaaactgat ttagtcacta tcggcaacga
    15601 cgcatgggcc accggtaacc cggtgtttaa aggttcttcg ctgatgttcc tcaaaccggg
    15661 catgcaggtt ccggtttctc agctgatccg cggtattaac ctgcaatcgg gtaacgatgc
    15721 ttgtgtcgcc atggctgatt ttgccgctgg tagccaggac gcttttgttg gcttgatgaa
    15781 cagctacgtt aacgccctgg gcctgaaaaa cacccacttc cagacggtac atggtctgga
    15841 tgctgatggt cagtacagct ccgcgcgcga tatggcgctg atcggccagg cgttgatccg
    15901 tgacgtaccg aatgaatact cgatctataa agaaaaagaa tttacgttta acggtattcg
    15961 ccagctgaac cgtaacggcc tgttatggga taacagcctg aatgtcgacg gcatcaaaac
    16021 cggacacact gacaaagcag gttacaacct tgttgcttct gcgactgaag gccagatgcg
    16081 cttgatctct gcggtgatgg gcggacgtac ttttaaaggc cgtgaagccg aaagtaaaaa
    16141 actgctgacc tggggcttcc gtttcttcga aaccgttaac ccactgaaag taggtaaaga
    16201 gttcgcctct gaaccggttt ggtttggtga ttctgatcgc gcttcgttag gggttgataa
    16261 agacatgtac ctgaccattc cgcgtggtcg catgaaagat ctgaaagcca gctatgtgct
    16321 gaacagcagt gaattgcatg cgccgctgca aaagaatcag gtcgtcggaa ctatcaactt
    16381 ccagcttgat ggcaaaacga tcgagcaacg cccgctggtt gtgttgcaag aaatcccgga
    16441 aggtaacttc ttcggcaaaa tcattgatta cattaaatta atgttccatc actggtttgg
    16501 ttaaaaatta aacacttgaa agtgtaattt ccgtccccat atactaagca tcagtaaaaa
    16561 aactcccgcc ttctggcggg agttgctatt taattacgtt acgccggagc tgacatgaaa
    16621 accaaactta acgaactgct tgaattccct actcctttta cttacaaagt tatggggcag
    16681 gcgttacctg agctggttga tcaggtggtt gaagtggtac agcgccatgc gccaggtgac
    16741 tacaccccaa cggtaaaacc aagcagcaaa ggcaactacc actcggtatc tatcactatc
    16801 aacgccactc atatcgagca ggttgaaata ctgtatgaag aactgggcaa aatcgatatt
    16861 gtccgcatgg ttctgtaact cgcttctccg ttacccggct cctggtcggg taactcccct
    16921 ctcctcgctg tgatatactt ttcccccact tttactcatt ctccacggag atgccgtttt
    16981 gtatcaggat aaaattcttg tccgccagct cggtcttcag ccttacgagc caatctccca
    17041 ggctatgcat gaattcaccg atacccgcga tgatagtacc cttgatgaaa tctggctggt
    17101 cgagcactat ccggtattca cccaaggtca ggcaggaaaa gcggagcaca ttttaatgcc
    17161 gggtgatatt ccggtgatcc agagcgatcg cggtgggcag gtgacttatc acgggccggg
    17221 acaacaggtg atgtatgtgt tgcttaacct gaaacgccgt aaactcggtg tgcgtgaact
    17281 ggtgaccttg cttgagcaaa cagtggtgaa taccctggct gaactgggta tagaagcgca
    17341 tcctcgggct gacgcgcctg gtgtctatgt cggggaaaag aaaatttgct cactgggttt
    17401 acgaattcga cgcggttgtt cattccacgg tctggcatta aacgtcaata tggatctttc
    17461 accattttta cgtattaatc cttgtgggta tgccggaatg gaaatggcta aaatatcaca
    17521 atggaaaccc gaagcgacga ctaataatat tgctccacgt ttactggaaa atattttagc
    17581 gctactaaac aatccggact tcgaatatat taccgcttaa ttccatacat caatggccca
    17641 atttacactg ggtcattact cataatacct gctaatgctt tacatctcct tcgcgtttgt
    17701 atattttctt tatcacttgc agaaatgcgg tgccacgcct tgctccgtaa ctcaccccat
    17761 tgattaacct attgaaatag ttgattatgg tgagcaaaag cgttccgttc caattagaca
    17821 taagattatt gtaatttttt aaatattatt tttccatgaa taaaattgga gtaagtgcgt
    17881 ggatagtaat aatcaaattg aaccctgttt aagcagaaag tcgtcagaag gtaaaccaca
    17941 aatatttaca accttacgaa atattgctct taaccttctg actatttttg aagctgtata
    18001 tgtacataaa gggatcgtta atgcagcgaa agtgcttaat ctgcccccct cggcaatcag
    18061 tcagtctatt cagaaactgc gcgttatatt ccctgaccca ttgtttattc gcaaaggcca
    18121 aggtgtcact cctaccgcat ttgcgatgca tctacatgag tatatcagtc agggccttga
    18181 gtccattctt ggcgcgctgg atatcgaagg aagctatgat aagcaacgaa cgataactat
    18241 tgcgaccact ccctcggtcg gagccctggt ccttcctgtc atctatcggg cgattaaaac
    18301 tcactatccg cagcttttac tgcgcaaccc gcccatcagc gacgcggaaa accaactcag
    18361 tcagtttcaa accgatctca tcatcgataa catgttttgc accaatcgta cggtgcaaca
    18421 tcatgttctg ttcaccgaca atatggtgtt aatttgccgc gagggaaatc cactactctc
    18481 tttagaagat gacagagaga ctatcgacaa cgctgcgcat gtacttctgt taccggaaga
    18541 gcaaaatttc agcggtctgc ggcagagagt tcaagaaatg tttccggacc ggcaaatcaa
    18601 tttcaccagc tacaacattt tgacaatcgc tgcactggtt gccaacagtg acatgttagc
    18661 gattattccc agccgttttt ataacctgtt tagccgctgc tggccgctgg aaaaactgcc
    18721 ttttccgtcc ttaaataagg agcaaataga tttctctatc cactacaaca aattcagcct
    18781 gcgtgatccc atcctgcacg gagtaataga tgttatccgt aatgcatttt gaaaaagtat
    18841 tgttacagcc agatcacagc gcagaacgat aaaatggcac aatccaacaa caattttaca
    18901 ttttcgcgac cgctttggct gctttcaggt ccgtttcaat gatatactgc cagtcgttaa
    18961 ttcaaaaata gttgataatt acaacaatct attgaattga aacgctttcc ttcgtaattc
    19021 gcaactggaa cacgcacgct atgagtaaac ccattgtgat ggaacgcggt gttaaatacc
    19081 gcgatgccga taagatggcc cttatcccgg ttaaaaacgt ggcaatagag cgcgaagccc
    19141 tgctgcgcaa gccggaatgg atgaaaatca agcttccagc ggactctaca cgtatccagg
    19201 gcatcaaagc cgcaatgcgc aaaaatggcc tgcattctgt ctgcgaggaa gcctcctgcc
    19261 ctaacctggc ggaatgcttc aaccacggca cagcaacgtt tatgatcctc ggcgctattt
    19321 gtacccgccg ttgtccgttc tgtgatgttg cccacggtcg cccggtagct cctgatgcca
    19381 atgaaccagt gaaactggcg cagaccattg ccgatatggc gctgcgttat gtggttatca
    19441 cctccgttga ccgtgatgac ctgcgcgatg gcggtgccca gcactttgcg gattgcatta
    19501 ctgccattcg ggaaaaaagc ccgcaaatca aaattgaaac tctggtgccg gatttccgtg
    19561 gtcgtatgga tcgtgctctg gatattctga ctgcaacgcc accagatgtg ttcaaccata
    19621 acctggaaaa cgtaccgcgt atttaccgtc aggtacggcc tggggcagat tacaactggt
    19681 cgctgaagct gctggaacgc tttaaagaag cgcatccgga aatcccgacc aagtctggtc
    19741 taatggtggg actgggtgaa accaatgaag aaattattga ggtaatgcgc gacctgcgcc
    19801 gtcatggtgt gacgatgtta acgctggggc aatatttgca gccaagccgc catcacctgc
    19861 cggttcaacg ttacgttagc ccggatgagt tcgacgaaat gaaagccgaa gcgctggcga
    19921 tgggctttac ccatgctgca tgcggtccgt ttgtccgttc ttcttaccac gccgatttgc
    19981 aggcgaaagg gatggaagtt aagtaatcct gtaataatta cttacatctg tctgataaaa
    20041 aacccgcttt ttgaagcggt ttttttgtat cgaacaagat attgagggag cgtcctgctc
    20101 gccacgtcac tctttatgag agagcttttc agcctgaaga tcaacgtctg cgcctttttt
    20161 cgccgcagca tcatcatcat tcatcgcctt cttgaaccct ttaatggccg ctccaaggtc
    20221 tccgcccagc gtacgtaact tcttagtccc aaacagcaga acgaccagcg ccgcaactac
    20281 tagcagtttg gtaatactaa tctcacccat agataccttc ttgacatata accggcaaca
    20341 gaacgcgcct taaaaaccag agaatattaa cggtcattcg acgcgcgcac acaatagcaa
    20401 tctgtaacaa ggtgaatcaa gcgccgagta aaaaaacatc ataataattg cggcggcgca
    20461 aagcgacggt tgtttaagac gggcagttgc gcgcgcacct gacgcacacg ttcgggcgtc
    20521 acttccgcca taatgagtgc aggcatttct gacgctgccg caatggtgac gccaaaggga
    20581 tctataatcc ggctttgccc gatatttttg ttcccgcact cgcccgccgc caccatataa
    20641 caggtggtat ccagcgcacg agcggcaagc aacgttgacc agtgatgctc tttgagcggc
    20701 ccgcgaaccc aggcggcagg aagtaccagg atttcagctc cctgtaatgc ctgtgccagc
    20761 gccagctctg gaaagcgtaa gtcataacag gtcatcagac cgaccttcat cccttccacc
    20821 tccagtaacg gagcgatttc attaccagca tcaacacggc gtgattcctg aatggcaaat
    20881 gcatcataga gatgcagttt ggcataacgg gcgacgatgt ttcctgcctg aagtgccacc
    20941 agcatattcc atgcgcgccc cggcgttgaa ggaacatgaa tcgtcagaat tgtcgtcatc
    21001 atgttacgtt tactttctcg ccgtaaacgt ccgaggaatt cgccttccag cagctgtgct
    21061 gatttaaccg atagatctgc atcatgatca tcgcgtgcca gcaatgcttc cggcaggaca
    21121 aacagcgata cgtcgttttc cgccgcctgc gccatcaacg aggcacaaat ctcagcgttc
    21181 ttttcccaca cagatgtaac agcaaactgt cctgcagcaa ccagcattgc cacctcctgt
    21241 cagagtcgta aaattcgcca acgacgatta ttcggcgtta cacttatcac tcatacaaat
    21301 caaatagcag gattttgcag tgttacaact tcttttagca gtttttattg gcggtggtac
    21361 gggaagcgtg gcgagatggc tgttaagtat gcgatttaac ccactgcatc aggcgattcc
    21421 gttggggacg ctgacagcaa acctgattgg ggcattcatc ataggaatgg gattcgcatg
    21481 gttcagcagg atgacgaaca ttgatccagt gtggaaagta ttaatcacca ccggattttg
    21541 tggcggtcta acaaccttct caacattttc ggcagaagtg gtgtttttgt tacaagaggg
    21601 tcgctttggc tgggcattac tgaacgtttt cgtcaacctt ctggggtctt ttgccatgac
    21661 agcactggct ttctggctgt tttcggcctc aaccgcacac taaagaccca aaaaaaaccc
    21721 gctgattaag cgggttttga attcttgctg acgtatctta cagagcgatt acgtttgcag
    21781 cagaagggcc tttggcaccg ttagtgattt cgaactctac gcgctgacct tcagcaagag
    21841 ttttaaaacc attagtctgg attgcagaga agtgtacgaa cacgtctttg ctgccgtctt
    21901 ccggagtaat gaaaccgaat cctttggact cattaaacca cttaacgtta cctttaatct
    21961 tagacatcaa aattaccttt acatgaaaaa tagacacaaa tgctgcgtcg gttaccagta
    22021 caccaattgt ggtacgcttt gtccagtgca actttactaa aaagtgataa aagtcgcgtt
    22081 atttttgatg ttacttattt tagctattga ttttaaagaa gttactaaaa cttcatttgt
    22141 ctcaaaactg aaagcgcatc caggcaaagt acacattgcc attgttgtag gtacccggaa
    22201 tgtaggtcat ctgaaaagtc actgggccat aacccacgga ggccaatggc agtagaaccg
    22261 ggagagggat gtaattccag ttatcgcgtg ccgttacgcc agcggtgaat cccagaccta
    22321 aatgaaaatt ttcatccgcc agcggtcgcc aggtactttc ccatccgtat ccggcaatcg
    22381 gttcccattt gttccacgag tccttaaatg ccatggcata caggccatgc cagtttcctt
    22441 tttcatccca acgcgacagg ccaaaaccgc caccccacgg tcgctcgtta tagcgatcgg
    22501 ttttttcttt gtcgtaagcg aaacgtgcat gccaggtgat ggcaggaata tataaatcat
    22561 aatgttcagg ctgttgccag gttggtgcaa tattttctct aaacgttgtc atccactcat
    22621 ctgcgttagc aaaaacttta ccaacgctga ttaactgaat aaaaacaaag gaaaagatag
    22681 cgacatattt actcacgttc atttgtgacc ataaaacatt tatcaaaaat ctactactag
    22741 catagcaaag ctacaattaa cataacctta atagacccaa cataaagaat aatctgaata
    22801 gctgctctat ttatttccgc ttgttcaagt taaatatttc cgcgcatcga ttaaagatga
    22861 tgcgtcgttt tctgcgatgg gaatagtcaa aaaagaaaaa ccaagtcttt tttgatgaca
    22921 aaatgcaatc aaggaaaaat tattttattt tttaacgaga tacaacaatc accttaacaa
    22981 agtatataat atatatcgtc aacctatgct catattagat tattttttga gcgcacagcc
    23041 gcagctaaca ccattgcaat taacaaattt gcatcaatcc accatcaatt tgcacacatt
    23101 attatgtgat aattgccaac cgctaaatat gcgttttgtt atctatgtat aaaaacagta
    23161 acttcaatgt cttaatggca gtttttcttg attttaatca gcattcatcg ccaatttatt
    23221 gggcatattt tttccttaag ctttaggaat tttttattat ttactttggg gcctggagac
    23281 aggaaaaatt atgctgacat tcattgaact ccttattggg gttgtggtta ttgtgggtgt
    23341 agctcgctac atcattaaag ggtattccgc cactggtgtg ttatttgtcg gtggcctgtt
    23401 attgctgatt atcagtgcca ttatggggca caaagtgtta ccgtccagcc aggcttcaac
    23461 aggctacagc gccacggata tcgttgaata cgttaaaata ttactaatga gccgcggcgg
    23521 cgacctcggc atgatgatta tgatgctgtg tggatttgcc gcttacatga cccatatcgg
    23581 cgcgaatgat atggtggtca agctggcgtc aaaaccattg cagtatatta actcccctta
    23641 cctgctgatg attgccgcct attttgtcgc ctgtctgatg tctctggccg tctcttccgc
    23701 aaccggtctg ggtgttttgc tgatggcaac cctatttccg gtgatggtaa acgttggtat
    23761 cagtcgtggc gcagctgctg ccatttgtgc ctccccggcg gcgattattc tcgcaccgac
    23821 ttcaggggat gtggtgctgg cggcgcaagc ttccgaaatg tcgctgattg acttcgcctt
    23881 caaaacgacg ctgcctatct caattgctgc aattatcggc atggcgatcg cccacttctt
    23941 ctggcaacgt tatctggata aaaaagagca catctctcat gaaatgttag atgtcagtga
    24001 aatcaccacc actgctcctg cgttttatgc cattttgccg ttcacgccga tcatcggtgt
    24061 actgattttt gacggtaaat ggggtccgca attacacatc atcactattc tggtgatttg
    24121 tatgctgatt gcctccattc tggagttcct ccgcagcttt aatacccaga aagttttctc
    24181 tggtctggaa gtggcttatc gcgggatggc agatgcgttt gctaacgtgg tgatgctgct
    24241 ggttgccgct ggggtattcg ctcaggggct tagcaccatc ggctttattc aaagtctgat
    24301 ttctatcgct acctcgtttg gttcggcgag tatcatcctg atgctggtat tggtgattct
    24361 gacaatgctg gcggcagtca cgaccggttc aggcaatgcg ccgttttatg cgtttgttga
    24421 gatgatcccg aaactagcgc actcttccgg cattaacccg gcgtatttga ctatcccgat
    24481 gctgcaggcg tcaaaccttg gccgtaccct ttcgcccgtt tctggcgtag tcgttgcggt
    24541 tgccgggatg gcgaagatct cgccgtttga agtcgtaaaa cgcacctcgg taccggtgct
    24601 tgttggtttg gtgattgtta tcgttgctac agagctgatg gtgccaggaa cagcagcagc
    24661 ggtcacaggc aagtaaatag taatgccgga ggcaagtttc ctccggcttt atcatgtcac
    24721 ccactgtggt atatgcgttg tggtctgcca actttgccgt gaacaatttc agcaataatc
    24781 agatggcggc tggcgcaata ttcaagataa cgtctggcag acgtgcggct gatggtcagt
    24841 gcctgcgcca ccgtttctgc cgtatgttgc acaccaggct ctttaaacag ttttcgcacc
    24901 gcgtttagcg tcaagggatc aatgccggtc ggcagttcgt ctttaggttc accgcgagca
    24961 taggcattaa acatctcatc aatttgcttc tggctggcgc tatcaatact ttccagcata
    25021 tgtttacgct ggcggaaacg ggttagcgtt tgccccagcc gttcataggc aatgggctta
    25081 atgagataat caaatacacc acaacgtacg gcttcagaca ccgtttccat atcgctggct
    25141 gcagtggtaa acaccacgtc gccgggataa tgcgcctgca ccagttcatg caataaatta
    25201 atccctctgc cgtcaggaag atagttatcg agcaagatta gccccggctt aaaacgctcg
    25261 atcatcattc gggcctgcgc caggtttccc gccagtaata tctgactgaa tccgggaatg
    25321 tgacgaatat attccgcatg catctctgcc agcggcgttt cgtcctcaac gatcaatagg
    25381 gttaatggag ctgtcattag gtttcacttt cggaatatag attgaaaata aggtaccgca
    25441 gggatcatta tcttcgagag tgataacacc accgcagcgc gttacgtagc tggcaatcaa
    25501 gtacaaccca atgccatgtt caccgggctc gtcagcacgc gtactgaccc cctgctcaaa
    25561 tattttgtct cgtagagact ctggaacgcc gcagccctga tcggcgactt caatcaccac
    25621 atcatcgcct tcatcgctga ggaataattc aacgatcttg tttccttcat cgctacgcag
    25681 gctggcttcg aaggcgttat caagtaaatt gcccacaatg gctgcaaact cggtgctatc
    25741 cagtcctggc ggcagttgcg aaagctggct accggggaca atgatcattt ttagccccag
    25801 ttcccgggcg cgctgcactt taccaaaaag cagccccgcc acctagcgat cggcaaacgc
    25861 ctcgcgcagg ctgtcaataa gctgttgctg ggcctgagac tccccctgca ccatcgccag
    25921 cacgcgatca tactctttca tctgcaacag accattgagc gtcgacatcc aattgagatg
    25981 ctcgtgtcgc aatgtacgaa ggctctcaac gtattgtttt atttgcgtca gttgcgcatt
    26041 gagggtggaa atttcgtctt tactgcgaaa gctgataatg gcccccagca aatcatcacc
    26101 tgaacgaata gcttcccgat tggcaataac gctcagaccg ttaaagttag ccaccatatc
    26161 ctgacgtttt tcatcaatct gttcggtaaa gaaatcggcg ggcctgacca cttcagcaat
    26221 gggtttaccc aaccattgcc gtccggggga actcagcccc agcatctttc ttgcgttacg
    26281 attgatggcg gtaatgtaac cgtgcggatc caccgcaatc agcccttcat aaaccgaact
    26341 aaacagcgcc tcttgctgac ggaccacgcg tgcgatttgc tttggctcca tgcccatcat
    26401 ctgccgacgg atatgcgcgg ccaggaacca cgacagcaac atcagaatcc ctaacagcac
    26461 gacaaacaca cctgccatcg gtaataaaaa ctcagcccgc cagctatcga ttttactcac
    26521 caggtagcca atcgacacca cgccgatgac ttttccatcg tcatcaaaga ttggcgtttt
    26581 ggcgcgcatc gccatcccca ttgacccttt cccggtaatg aagtagctct cccctttctc
    26641 cagcgcgccc tgtttggtga actgcatagg ataaccaatt ttctccggat taggatggta
    26701 aaggcggatc gagtgccggt cgccatcacc acataatcaa aatcggtatc tctttgtaat
    26761 ttgttagcga tggtcgccag ccgtttgtag tcacgcgttt tcaccgcaga gatgacactg
    26821 tcattggagg caataatttt cgcctgattc attgccatgt cgcgtacatg aagcgttaaa
    26881 tagtcctcaa aactggccgt aaaatattgc gccaaggctg caatgacaaa tattgagaac
    26941 accagaatca gcaaaaagat acgcagcgga aatgccagtc tttggaaaaa tgcaaactgt
    27001 ttattctcgt taagctgcaa cattgttttc cttgcgggtt atcccgagcc tctttgacag
    27061 atgtaattaa aatgttgaat caaaatacat agatattaat tatgatcgtg gcaaatttta
    27121 ttcattaaat caattaaatc acttaaacct gcaggtcatt tcgtaattac attaattaaa
    27181 aaacttaaac cattaaataa ataaaaattt cacgccgaaa tactccttag gatgtatagc
    27241 gaaaggagaa aaagatatac ctcgatcacc cccctttctc ccaagtgaaa ataaaaggtt
    27301 atcagtttgc aacattgaac aacattcgtt gcaaatcgat aacaacatgc accttcagga
    27361 tactatttat tatgttcggc aatgatattt tcacccgcgt aaaacgttca gaaaataaaa
    27421 aaatggcgga aatcgcccaa ttcctgcatg aaaatgattt gagcgttgac accacagtcg
    27481 aagtatttat taccgtaacc cgcgatgaaa agcttatcgc gtgcggtgga attgccggaa
    27541 atattattaa atgcgttgct atcagtgaat ccgttcgcgg tgaaggactg gcgctgacat
    27601 tagccactga actgataaac ctcgcctatg agcggcacag cacgcatctg tttatttata
    27661 ccaaaaccga atacgaggcg ctgttccgcc agtgcggttt ttccacgctg accagcgtac
    27721 ccggcgtgat ggtgctgatg gaaaacagcg ccacgcgact gaaacgctat gccgaatcgc
    27781 tgaaaaaatt tcgtcatcca gggaacaaga ttggctgcat tgtgatgaac gccaatccct
    27841 ttacgaatgg tcaccgttat ctgattcaac aagctgcggc acagtgcgac tggttgcatc
    27901 tgtttttagt caaagaagat tcttcacgct tcccctatga agaccggctg gatctggtgt
    27961 taaaaggcac cgccgatatt ccacgcctga ctgtgcatcg cggctccgaa tacatcatct
    28021 cccgcgctac gttcccttgc tacttcatta aagaacagag cgtcattaac cattgttaca
    28081 ccgaaattga tctgaagatt ttccgtcagt acctcgctcc cgcactgggt gtaactcacc
    28141 gctttgtcgg tactgaaccc ttttgtcgcg ttaccgccca gtacaaccag gatatgcgct
    28201 actggctgaa aacgccgact atctccgcac cgcccatcga actggttgaa attgagcggc
    28261 tgcgttacca ggagatgccg atatccgctt cccgggtacg tcaactgctg gcgaaaaacg
    28321 atctcacggc tatcgcgccg ctggtccctg cagtcacgct gcattatttg cagaacctgc
    28381 ttgagcactc ccgccaggac gcggcagctc gtcaaaagac ccccgcatga gaaacaggtg
    28441 aaaaatgaaa ataaaccagc ccgccgttgc aggcaccctt gagtctgggg atgtgatgat
    28501 acgcatcgcc ccactcgata cgcaggatat cgacctgcaa atcaacagca gcgttgagaa
    28561 acagtttggc gatgcaattc gcaccaccat tctggacgtt ctcgcccgct acaacgtgcg
    28621 cggcgtacag ctgaatgtcg atgacaaagg cacactggac tgcattttac gtgcacgact
    28681 ggaagccctg ctggcacgcg ccagcggtat cccgactctg ccatgggagg attgccaatg
    28741 atttccgctt cgctgcaaca acgtaaaact cgcacccgcc gcagcatgtt gtttgtgcct
    28801 ggtgccaatg ccgcgatggt cagcaactcc ttcatctacc cggctgatgc cctgatgttt
    28861 gacctcgaag actccgtggc attacgtgaa aaagacaccg cccgccgcat ggtttatcac
    28921 gcgctgcaac atccgctgta tcgcgatatt gaaaccattg tgcgtgtcaa cgcgctggat
    28981 tccgaatggg gtgttaacga cctggaagcc gtcgttcgcg gtggtgcgga cgttgtgcgt
    29041 ctgccgaaaa ccgataccgc tcaggatgtt ctggatattg aaaaagagat cctgcgtatc
    29101 gaaaaagcct gtggtcgtga acccggcagc accggcctgc tggcggcgat tgaatctccg
    29161 ctgggcatta cccgcgcagt ggaaatcgct cacgcttccg agcgtttgat cggtatcgcc
    29221 ctcggtgcag aagactatgt gcgcaacctg cgtacagaac gctccccgga aggaactgaa
    29281 ctgctgttcg cacgctgttc cattttgcag gccgcgcgct ctgcgggtat tcaggcgttc
    29341 gataccgtct attccgacgc taacaacgaa gccggattcc tgcaagaagc cgcccacatc
    29401 aaacagctgg gctttgacgg caaatcgctg atcaacccgc gtcagattga tctgctgcac
    29461 aacctctacg caccgaccca gaaagaagtg gatcacgccc gccgcgtcgt agaagccgct
    29521 gaagccgccg ctcgcgaagg cctcggcgtg gtttccctga acggcaagat ggtggacggt
    29581 ccggttatcg atcgcgcccg tctggtgctc tcccgtgcag aactttccgg catccgcgaa
    29641 gaataaggca atcaaaatga cgcagaaaat tgaacaatct caacgacaag aacgggtagc
    29701 ggcctggaat cgtcgcgctg aatgcgatct tgccgctttc cagaactcac caaagcaaac
    29761 ctaccaggct gaaaaagcgc gcgatcgcaa actgtgtgcc aacctggaag aagcgattca
    29821 tcgctctggt ttacaggacg gcatgacggt ttccttccat cacgctttcc gtggcggtga
    29881 cctgaccgtc aatatggtga tggacgtcat cgcgaagatg ggctttaaaa acctgactct
    29941 ggcctccagc tccctgagtg attgccatgc gccgctggta gaacacattc gccagggcgt
    30001 ggttacccgc atttatacct ctggcctgcg cggtccactg gcggaagaaa tctcccgtgg
    30061 tctgctggcg gaaccggtgc aaatccactc tcacggcgga cgtgtgcatc tggtacagag
    30121 cggcgaactg aatatcgacg tggctttcct cggcgtccca tcctgtgatg aattcggtaa
    30181 tgccaacggt tacaccggta aagcctgctg tggctccctc ggctatgcaa tggttgatgc
    30241 cgacaacgca aaacaggtcg tgatgcttac cgaagaactg ctgccttatc cgcataatcc
    30301 ggcaagcatt gagcaagagc aggttgattt gatcgtcaaa gttgatcgcg ttggcgatgc
    30361 tgcaaaaatc ggcgctggtg cgacccgtat gaccactaac ccgcgcgaac tgcttattgc
    30421 ccgtagcgct gcggatgtga ttgtcaactc tggctacttc aaagaaggtt tctccatgca
    30481 aaccggcacc ggcggcgctt cgctggcggt aacccgtttc ctggaagaca aaatgcgtag
    30541 ccgcgatatt cgcgccgact tcgccctcgg cggtattact gcaacgatgg ttgatctgca
    30601 cgaaaaaggt ctgatccgca aactgctgga tgtgcagagc tttgacagcc atgctgcgca
    30661 atcgctggcc cgtaacccca atcacatcga aatcagcgcc aaccagtacg ctaactgggg
    30721 ttcgaaaggc gcatcggttg atcgtctcga cgtggtggta ctgagcgcgc tggaaattga
    30781 cacccagttc aacgttaacg tgctgaccgg ctctgacggc gtactgcgtg gtgcttccgg
    30841 tggtcactgc gataccgcga ttgcctctgc gctttccatc atcgtcgcgc cgctggtacg
    30901 cggtcgtatt ccgactctgg tggataacgt gctgacctgc atcaccccgg gctccagtgt
    30961 cgatattctg gtcacagacc acggtatcgc agttaacccg gcacgtccgg agctggcaga
    31021 acgtctgcag gaagcgggca ttaaagtggt ttccattgag tggctgcgtg aacgtgcgcg
    31081 tctgctgacc ggtgaaccac agccgattga attcaccgac cgcgtcgttg ccgttgtgcg
    31141 ttaccgcgat ggctcggtga tcgatgttgt acatcaggtg aaggaataag ccatgcacct
    31201 gcttcctgaa ctcgccagcc accatgcggt gtcaattccc gagctgctcg tcagccggga
    31261 tgaaaggcaa gcacggcaac acgtctggct caagcgccat cctgttccac tggtctcctt
    31321 taccgtggtt gcgcctaggc cgattaaaga cagtgaggtc acacgccgaa tttttaatca
    31381 tggcgtgaca gccttgcgtg ccttagccgc aaaacagggc tggcaaattc aggagcaggc
    31441 tgcactggtt tccgccagcg ggccggaggg tatgttgagc attgccgccc ctgctcgcga
    31501 cctcaagctc gccaccattg agcttgaaca tagtcatcct ctcgggcggt tatgggatat
    31561 cgatgtcctg acgcccgaag gcgaaattct ctcccgccgc gactattcac tgccgcctcg
    31621 ccgctgcctg ttgtgcgagc aaagcgcagc cgtctgcgcg cgtggaaaac ccatcaactg
    31681 accgatttac tcaaccgcat ggaggcactg ctgaacgatg tcgatgcctg caacgtcaac
    31741 taaaaccaca aagcttgcga cgtcattaat cgatgagtac gccctgctgg gctggcgcgc
    31801 catgctgact gaagtcaatc tgtcaccgaa accaggtctc gtggatcgca ttaactgcgg
    31861 tgcgcataaa gatatggcgc tggaagattt ccaccgcagc gcgctggcga ttcagggctg
    31921 gctaccccgt ttcattgaat ttggtgcctg tagtgcggaa atggcaccag aagcggtact
    31981 ccacggatta cgcccaattg gtatggcttg caaaggtgat atgttccgcg ccaccgcggg
    32041 cgtaaacacg cataagggca gcattttttc tttagggcta ctgtgtgcgg caattggccg
    32101 tttgcttcag ctcaaccagt cgctaacgcc aacaaccgtt tgttctacgg cggcaagttt
    32161 ctgccgtggc ctgaccgatc gcgaactgcg taccaataat tcacaactga cggcaggtca
    32221 acggttgtac cagcagcttg cccttaccgg cgcacgcggt gaagccgaag cgggttatcc
    32281 actggtgatc aaccacgcct tgccgcatta cctcactctg ctggatcagg ggttagatcc
    32341 tgaactggca ttgctcgata ccttgctcct actgatggcg atcaacggcg ataccaacgt
    32401 tgcttcgcgc ggtggcgagg gggcctgcgc tggctatagc gcgaggcgca aacattattg
    32461 caaaaagggg gcattcgaac ccccgccgat ctcgattatc tccggcagtt cgacagggag
    32521 tgtatcgaac gaaatctcag tccaggcggc agtgccgacc tgctgatcct tacctggttt
    32581 ttagcacaga tttaattatt taagcacttg ataaatttgg aaatattaat tttcggagaa
    32641 cccgtatgtc tttagcaaaa gataatatat ggaaactatt ggccccactg gtggtgatgg
    32701 gtgtcatgtt tcttatccct gtccccaacg gtatgccacc acaggcatgg cattacttcg
    32761 ctgtgtttgt ggcaatgatt gtcggcatga tcctcgagcc aattccggca acagcgatca
    32821 gttttattgc ggttactatt tgcgttattg gcagtaatta cctgctcttt gatgccaaag
    32881 aattagctga cccagcgttt aatgcgcaaa aacaggcgct gaaatggggt ctggctggtt
    32941 tttccagcac cacggtatgg ctggtatttg gcgcatttat ttttgcatta gggtatgaag
    33001 tttccgggtt aggtcgtcgc attgcccttt tcctggtgaa attcatgggc aaacgcacgc
    33061 tgacgttggg ttatgcgatt gtcattatcg acattctgct ggcgccgttt acaccgtcca
    33121 acaccgcgcg taccgggggt acggtttttc cggtcattaa aaacctgccg ccgttgttta
    33181 aatcattccc caacgatccg tccgcgcgtc gtattggcgg ctatttgatg tggatgatgg
    33241 tcattagtac cagtctgagt tcgtccatgt ttgtcaccgg tgcggcacca aacgtgctgg
    33301 gtctggagtt cgtcagcaaa attgccggta tccagattag ctggttgcag tggttcctct
    33361 gcttcctgcc ggttagggtt atcttgctta tcattgcgcc gtggctttcc tacgtgctgt
    33421 acaaaccgga aatcacacac agtgaagaag tggcaacctg ggcgggtgat gaactgaaaa
    33481 ccatgggtgc gctgacacgc agagagtgga cactgattgg ccttgtattg ctcagcttag
    33541 gtttgtgggt ttttggcagt gaagtcatta atgctactgc agttggtctg ctggcagttt
    33601 cgctaatgct ggccctgcac gttgtgcctt ggaaagatat tacccgctat aacagcgcat
    33661 ggaacacgct ggtcaacctg gcaactctgg ttgtgatggc taacggcctg actcgttctg
    33721 gctttattga ctggttcgcc ggtaccatga gtacgcacct ggaaggattc tcaccaaacg
    33781 caacggtgat tgtactggtt ctggtgttct actttgcaca ctacctgttt gccagcctgt
    33841 ctgcgcacac cgcaaccatg ctgccggtta ttctggccgt cggtaaaggt attccgggcg
    33901 taccaatgga acaactgtgt atcctgctgg tgctgtctat cggtatcatg ggctgtctga
    33961 cgccctatgc aaccggtcct ggggtgatta tttacggctg tggctatgtg aaatcaaaag
    34021 attactggcg tcttggcgca atcttcgggg tgatttatat ctctatgttg ctgttggttg
    34081 gctggccgat tctcgccatg tggaactaat acgttcgcca aacgctgaat aaatcatcac
    34141 gcccgccagg taagcccacc tggcgggcgt gatgatttaa tagatagtat tcagtgtatg
    34201 tatgagttcc acacccatta tgaaagaatt ctggcgtaac gccgcgttgc tcgcggtttc
    34261 tctgcttccc ttctcttctg ccaacgccgt agcgttgcag gcaaaacagt atggcgattt
    34321 tgatcgctat gtcctggccc tctcctggca aaccggattt tgccagagtc aacacgatcg
    34381 aaatcgtaac gaacgagatg aatgtcgcct gcaaaccgaa acgaccaaca aagctgattt
    34441 tctgaccgta catggtctgt ggccaggatt gcctaaatcg gttgctgccc gtggtgttga
    34501 tgaacgccgc tggatgcgct tcggttgcgc tactcgccca atcccgaatc taccagaagc
    34561 gcacgccagc cggatgtgtt catcgccgga aaccgggtta tcactggaaa cggccgctaa
    34621 actaagtgaa gtcatgccag gagctggcgg acgttcctgc ctggaacgct acgaatatgc
    34681 caaacacggt gcctgctttg gttttgatcc ggacgcatac ttcggtacga tggtacgcct
    34741 gaatcaagaa attaaagaga gcgaagccgg aaaattcctt gcggataatt acggtaaaac
    34801 agtgagccgc cgtgactttg acgccgcctt tgccaaaagc aggggaaaag agaacgtgaa
    34861 agcagttaag ctaacgtgcc agggtaaccc tgcgtatttg actgaaattc agatctcgat
    34921 caaagctgac gccatcaacg ctccgctttc tgcaaactca ttcttgccac aaccacaccc
    34981 aagcaactgt ggcaaaacct ttgtgattga taaagtgggt tattaatcat ctgatttaca
    35041 aaacacgcta attcgtcttc cataaaccgt gacgattaag aattatacat aatgcgctgc
    35101 attgaggaat tccctgaatg tgacgcaaat cacttcaaag agtgagcaac agtcagtatc
    35161 atcatgtgag ttaaaccctc gccgcctgac ggtgagggtt ttcttttggg tatgtttatc
    35221 tgcgacactc gcagtaccga cgacatggag taaaaatgtc cagaccaact atcatcatta
    35281 acgacctgga tgccgaacgc atcgatattc tgctggagca acccgcctat gctggtttgc
    35341 caatcgccga cgcgttaaac gcagagttgg atcgcgccca aatgtgttcg ccagaagaga
    35401 tgccacacga cgtggtgaca atgaacagcc gggttaaatt ccgcaatctt agcgatggcg
    35461 aagtgcgtgt gcgcacgctg gtgtatccgg caaaaatgac cgatagcaat actcagcttt
    35521 ccgttatggc tccggtaggt gccgcactgc tggggctgcg cgttggcgat tccattcact
    35581 gggaacttcc gggcggcgtt gcaacccacc ttgaagtgct ggaactcgaa taccagccag
    35641 aagctgctgg cgactacctg ctttaatccc atctgcacaa gcgataactc gctttgccca
    35701 gaggatgcac tcgcatcctc tttacgcaaa atcagcaatt tttcctggtt ctcactgttc
    35761 acttttgctg caaaattatt ccgtttcgtt tgtgggaata accatggcag aagcatttta
    35821 catcctgata ggatttctga ttatggcggc gattatcgtc atggctgtcc tttacctcga
    35881 aaaccactcc tgacgatcat attgttcccc ccggcatcgc attcaccaga cctgaaactg
    35941 ccttctcgcc tcctctgcgc tttgtgcacc gggtaccaga atcaccttac ggcactcctc
    36001 ttcacgtttt tcgaaaatct catatccccg ggcggcctct tcaaacggca tatagtgggt
    36061 aacaatttct tctggtttca gtaatccttt ctcaattaac ggtaataatt ctcccagcca
    36121 tgcgtgaacg tgggtctgtc ccattttaaa cgtcaaccct ttatcaaagg cgtcaccaaa
    36181 caggaaaccg tgaataaatc cagcgtagac gcccggtacg ctaacaatgc cgccacgcct
    36241 gaccgccgca atacactggc gcaacgcttt accgctgctg ccctccagtt tcaggttagt
    36301 cagcaccgtt tccgtggtgc tgcctttcgc ttcaaaaccg acggcgtcta ttactgcatc
    36361 cacgccccgg tgacctgccg tttgttcaat aattgactgt gccggatcgc tatcttcatc
    36421 gaaattaatc gggatcgcgc cgtagcggtc agcggcgaaa ctcaagcggt agggatgatg
    36481 atcaacaaca aaaatctgtt ccgcaccgag caaccgtgca caggcgattg tcaacaatcc
    36541 cactggaccg gcaccataga ctgcaacgct tgaaccttgt tggatctgcg cattttttgc
    36601 tgcctgccat gccgttggca gaatatcaga aaggaaaagg gctttatcat ctgaaagcaa
    36661 aggcggtact ttaaacggcc ccacattccc tttagggacg cggacatatt ccgcctgtcc
    36721 accaggaacg ccaccataca ggtgactata accaaacaat gccgcgggag ctggtatctg
    36781 ttttttattg agcgcagcgc ctttacccgc attggtattt tcgcaggcgg catattgctg
    36841 cattcgacag aaaaaacagt cgccacaagc aatgacaaac ggaattacca cccggtcgcc
    36901 tttttgcaaa ttttttacgt cctttccggt ttcaacgact tcccccataa attcatgacc
    36961 aaaaatatcg ccatgtttaa cctgaggtat tttgcctcga taaagatgga gatcagagcc
    37021 acagatcgcc gttgccgtaa tacgcagaat aatatcatct gcctgttcaa tgcccggatc
    37081 gggaacattt tctacctgaa cgtgatgtgg gccgtgataa gtcaatgctt tcatgcaacc
    37141 tccagagaca gttcaaaaaa gagtcagtct ttaagggtag ctatcacagc gggaaaacgg
    37201 gcggtaccgc aggttttggg agaattcctg gtgttcagtg agaatatatt aatcacagaa
    37261 accgttcgta aggaaaaaga accagacaaa tatcagggat aaatattata atcatggcga
    37321 atgatttgtt catgattaac agggagaaag ggttatgtat aagacaatca ttatgccagt
    37381 tgatgtattt gaaatggaat tgagcgacaa agctgttcgc cacgctgaat tcctcaccca
    37441 ggatgacgga gttattcatc tacttcacgt actacccggg tcagccagcc tgagcctgga
    37501 ccgttttgcc gctgatgtgc gtcgttttga agagcatctg caacatgaag cagaagaacg
    37561 tctgcaaacg atggtcagcc acttcaccat cgatccttcc cgcattaaac aacatgtccg
    37621 ttttggtagc gtgcgggatg aagtcaatga gttggcagaa gaactggggg ctgatgttgt
    37681 agttatcggt tctcgcaacc catcgatttc gacccatctg ttaggttcta acgcctcgag
    37741 cgtgatccgc cacgccaatc tgcctgtact ggtcgttcgc taacagataa aagtatttat
    37801 gccgccctgc ctggaacatc ccggcagggc tttttaatgc cataaaaaag ccgctaggtt
    37861 tgaccccggc ggctaagcaa ttgcaggtga atcttacttc ttcttatgca gttttggtgc
    37921 gaatcaggta gtcaaaagca ctcagagagg ctttggcacc ttcgccagtg gcgatgatga
    37981 tctgcttgta cggaaccgtc gtacagtcac ccgctgcgaa tacgcctttg acgttggttt
    38041 cgcatttcgc atcaatgata atctcaccca tgcggttacg ttcgactgcg ccttcgagcc
    38101 agttggtgtt cggcagcaga ccaatctgca cgaaaatacc ggccagttcg atgttgtgaa
    38161 tatcgccgct gacacgatct cgatattcca gaccaacgac tttgctgccg tcgcctttca
    38221 cttccgtggt ttgcgcattc agaataatgt cgacgttttt caggctgcgc agtttgtcct
    38281 gcagaacctg gtcggctttc atttctggcg caaattccag cagcgttacg tgctcaacga
    38341 tacccgccag gtcaattgcc gcttccacgc cggagttacc gccgccgata accgctacgc
    38401 gtttaccttt aaacagcggg ccgtcgcagt gcgggcagta ggtcacgcct ttggtgcgat
    38461 actgatcttc gcccggaacg ttcatgttgc gccattttgc accggtcgcc acgataatgc
    38521 tgcgtgcttt cagtaccgcg ccagaagctg tttcaatctg atgcagacca ccttcaactg
    38581 ctgctgggat cagtttgctg gcgctctggc tgtcgatcac atcaacgtcg tattcatcaa
    38641 cgtgaacttt cagtgcgcct gccagcttct gcccttcagt cttcggtaca gaaatgtagt
    38701 tttcgatatc aacggtatcg aggatctgac caccaaaacg ttcgcccatc agaccggtac
    38761 ggatgccttt acgtgcggag taaattgctg ccgctgcacc cgccgggccg gaaccgacga
    38821 ttaatacgtc ataagcatca cgcttgttca gctcttctgc cgcacgtttt tccgcgcccg
    38881 tatcaatttt ggcaacgatt tcagtcaacg tcatgcggcc ctgaccaaac tctttcccgt
    38941 ttacgaacac tgccggaacg cccatcacgt tgcgatcggt gatttcgttc tggaaggtgc
    39001 cgccgtcaat tgcagtgtgc ttgatgcgcg ggttcagtac gctcatcagg ttcagcgcct
    39061 gcaccacgtc cgggcagtta tggcaagaga gcgagtaata ggtttcgaat tcaaaatcac
    39121 cgtcaatatg gcgaatctgc tccagcagag actgcgcttc tttcgacgga tgaccaccgg
    39181 tccacagcaa cgccagtacc agcgaggtga actcgtggcc cagcggggag cctgcaaaac
    39241 gtggcccctg gttggaacct aggttggtga tcaggaaaga cggcttacgc accggcaagc
    39301 tgttatcttc tttaaaggtg actttgtctg acagttctgc gatttcagcc aacagttcct
    39361 tgatttctgc cgatttagcg ctgtcatcca gcgtggcaat taactcaaca ggcttggtca
    39421 atttctcaag gtaagccttg agttgagttt tcatatttgt gtcgagcatg tttatctcct
    39481 gggctttaaa catcatcatg caagcggcct ctacggctac ctggatgcag cttgcatcat
    39541 agtgcgggga agaaaatcgg gtgccgcagc acccgaagaa ttaggtgaat ttccgaagta
    39601 tttcgcgccg gagttggtag cgcgaaagac gaaggaaatt tagattttac caaccaggtc
    39661 cagagacgga gccagagttg cttcaccttc tttccattta gccgggcaaa cttcacctgg
    39721 gtgagaagct acgtactgtg ctgctttgat tttacgcagc aggtcagacg cgtcacggcc
    39781 aatgccttca gcggtaactt cgattgcctg gatgataccc tgcgggtcaa caacgaaggt
    39841 cgcacggtca gccagacctt catcttcacg catgttgtcg aagttacggg tcagggcgcc
    39901 agtcgggtcg ccgatcatcg catatttgat tttagcgatg gtttcagagc tgctgtgcca
    39961 tgctttgtgg gtgaagtgag tatcggtaga tactgcgtat acgtctacgc ccagtttctg
    40021 cagttcttcg tagtggtcag caacgtcacc cagttcggtc gggcatacga aagtaaagtc
    40081 agccgggtag aagaagaaga cgctccagcg gccttcggta tctttttcgg tgatttcgat
    40141 gaattcgccg tttttgaatg cctggttttt aaaaggttta attttggtgt taatcaagga
    40201 catctatact tcctccgtgt tttcgatgag atgtaaggta accaattttt gccgattcgg
    40261 ctaatgcgtt tccattatca aatcgataag ttttacctta caaccttcgt aagacaactt
    40321 tgtgaacttt gcaccgccag cggcgataaa aagtaaaatg gccccctttc caggtgaccg
    40381 tgtaatctga actacccttt ggtatcttca gcgcctgcct gcaggctgag gcgttgccct
    40441 tacaaatgca acaacgacat ggattacaac accctcataa acaaagggca atcacctgat
    40501 ctaagctctt acctatgaca gtgataggtt atgcctttta ctcgactttt gcactgactg
    40561 aaaaggacaa attaatgtta aaaaagatac ttttactggc tctgcttcct gcaatcgcct
    40621 tcgcagagga acttcctgct ccagtaaaag cgattgaaaa acagggcatt acaatcatca
    40681 aaacgttcga tgcccccgga ggaatgaaag gttatctcgg aaagtatcag gatatgggcg
    40741 tcaccatcta cctgactcca gatggtaagc acgctatctc tggttacatg tacaacgaga
    40801 aaggtgaaaa cctgagtaac acacttatcg aaaaagaaat ttacgcacca gccggacgcg
    40861 aaatgtggca acggatggaa caatcccact ggctcctcga cggtaaaaaa gatgcgccgg
    40921 tcattgtcta cgtcttcgcc gatccgttct gcccatattg taaacagttc tggcagcagg
    40981 c
//
LOCUS       DADMJE010000012        40425 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.012, whole genome shotgun sequence.
ACCESSION   DADMJE010000012 DADMJE010000000
VERSION     DADMJE010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40425)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40425)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40425
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.012"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(115..2436)
                     /locus_tag="JN001_000625"
     CDS             complement(115..2436)
                     /locus_tag="JN001_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417866.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HAY9051953.1"
                     /translation="MMNDSFCRIIAGEIQARPEQVDAAVRLLDEGNTVPFITRYRKEI
                     TGGLDDTQLRNLETRLSYLRELEERRQAILKSISEQGKLTDDLAKAINATLSKTELED
                     LYLPYKPKRRTRGQIAIEAGLEPLADLLWSDPSHTPEVAAAQYVDADKGVADTKAALD
                     GARYILMERFAEDAALLAKVRDYLWKNAHLVSTVVSGKEEEGAKFRDYFDHHEPLSTV
                     PSHRALAMFRGRNEGVLQLSLNADPQFDEPPKESYCEQIIMDHLGLRLNNAPADSWRK
                     GVVSWTWRIKVLMHLETELMGTVRERAEDEAINVFARNLHDLLMAAPAGLRATMGLDP
                     GLRTGVKVAVVDATGKLVATDTIYPHTGQAAKAAMTVAALCEKHNVELVAIGNGTASR
                     ETERFYLDVQKQFPKVTAQKVIVSEAGASVYSASELAAQEFPDLDVSLRGAVSIARRL
                     QDPLAELVKIDPKSIGVGQYQHDVSQTQLARKLDAVVEDCVNAVGVDLNTASVPLLTR
                     VAGLTRMMAQNIVAWRDENGQFQNRQQLLKVSRLGPKAFEQCAGFLRINHGDNPLDAS
                     TVHPEAYPVVERILAATQQALKDLMGNSSELRNLKASDFTDEKFGVPTVTDIIKELEK
                     PGRDPRPEFKTAQFADGVETMNDLQPGMILEGAVTNVTNFGAFVDIGVHQDGLVHISS
                     LSNKFVEDPHTVVKAGDIVKVKVLEVDLQRKRIALTMRLDEQPGETNARRGGGNERPQ
                     NNRPAAKPRGREAQPAGNSAMMDALAAAMGKKR"
     gene            complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JN001_000626"
     CDS             complement(2533..3045)
                     /gene="greB"
                     /locus_tag="JN001_000626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709179.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreB"
                     /protein_id="HAY9051954.1"
                     /translation="MRIIKQTKGINEMKTPLVTREGYEKLKQELNYLWREERPEVTKK
                     VTWAASLGDRSENADYQYNKKRLREIDRRVRYLTKCMENLKIVDYSPQQEGKVFFGAW
                     VEIENDDGVTHRFRIVGYDEIFGRKDYISIDSPMARALLKKEVGDLAVVNTPAGEASW
                     YVNAIEYVKP"
     gene            3237..3956
                     /gene="ompR"
                     /locus_tag="JN001_000627"
     CDS             3237..3956
                     /gene="ompR"
                     /locus_tag="JN001_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018150685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator OmpR"
                     /protein_id="HAY9051955.1"
                     /translation="MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLL
                     TRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDY
                     IPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMP
                     LTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAH
                     PRYIQTVWGLGYVFVPDGSKA"
     gene            3953..5305
                     /gene="envZ"
                     /locus_tag="JN001_000628"
     CDS             3953..5305
                     /gene="envZ"
                     /locus_tag="JN001_000628"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     EnvZ"
                     /protein_id="HAY9051956.1"
                     /translation="MRRLRFSPRSSFARTLLLIVTLLFASLVTTYLVVLNFAILPSLQ
                     QFNKVLAYEVRMLMTDKLQLEDGTQLVVPPAFRREIYRELGISLYSNEAAEEAGLRWA
                     QHYEFLSHQMAQQLGGPTEVRVEVNKSSPVVWLKTWLSPNIWVRVPLTEIHQGDFSPL
                     FRYTLAIMLLAIGGAWLFIRIQNRPLVDLEHAALQVGKGIIPPPLREYGASEVRSVTR
                     AFNHMAAGVKQLADDRTLLMAGVSHDLRTPLTRIRLATEMMSEQDGYLAESINKDIEE
                     CNAIIEQFIDYLRTGQEMPMEMADLNAVLGEVIAAESGYEREIETALYPGSIEVKMHP
                     LSIKRAVANMVVNAARYGNGWIKVSSGTEPNRAWFQVEDDGPGIAPEQRKHLFQPFVR
                     GDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGGLSIRAWLPVPVTRAQGTTKEG
                     "
     gene            complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JN001_000629"
     CDS             complement(5381..7003)
                     /gene="pckA"
                     /locus_tag="JN001_000629"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase (ATP)"
                     /protein_id="HAY9051957.1"
                     /translation="MRVNNGLTPQELEAYGISDVHDIVYNPSYDLLYQEELDPSLTGY
                     ERGVLTNLGAVAVDTGIFTGRSPKDKYIVRDDTTRDTFWWADKGKGKNDNKPLSPETW
                     QHLKGLVTRQLSGKRLFVVDAFCGANPDTRLSVRFITEVAWQAHFVKNMFIRPSDEEL
                     AGFKPDFIVMNGAKCTNPQWKEQGLNSENFVAFNLTERMQLIGGTWYGGEMKKGMFSM
                     MNYLLPLKGIASMHCSANVGEKGDVAVFFGLSGTGKTTLSTDPKRRLIGDDEHGWDDD
                     GVFNFEGGCYAKTIKLSKEAEPEIYNAIRRDALLENVTVREDGTIDFDDGSKTENTRV
                     SYPIYHIDNIVKPVSKAGHATKVIFLTADAFGVLPPVSRLTADQTQYHFLSGFTAKLA
                     GTERGITEPTPTFSACFGAAFLSLHPTQYAEVLVKRMQAAGAQAYLVNTGWNGTGKRI
                     SIKDTRAIIDAILNGSLDNAETFTLPMFNLAIPTELPGVDTKILDPRNTYASPEQWQE
                     KAETLAKLFIDNFDKYTDTPAGAALVAAGPKL"
     gene            7382..9106
                     /locus_tag="JN001_000630"
     CDS             7382..9106
                     /locus_tag="JN001_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4153 domain-containing protein"
                     /protein_id="HAY9051958.1"
                     /translation="MDNVELSPATRWGMIATGLLQGLVCYLLIAWLAGKNHSWIVYGV
                     PATVAFSSVLLFSVISFKQKRLWGWLALVFIATTGMSGWLKWQTDGMNPWRAEKAIWD
                     FGCYLLLMAMLLLPWIQQSLRIRNCSSRYSYFYQSVWHNVLILLVIFLANGLTWLVLL
                     LWGELFKLVGIKFFNTLFFATDWFMYLTLGLVTALAVILARTQSRLIDSIQKLFTLIA
                     TGLLPLVSLLTLMFIITLPFTGLSAISRHISAAGLLLTLAFLQLILMAIVRDPQKASL
                     PWTGPLRCLIKTALLVAPLYVFVAAWALWLRVAQYGWTVDRLQGALAVLVLLVWSLGY
                     FVSIVWRNGQNPLVLQGKVNLAVSLLVLVILVLLNSPVLDSMRISVNSHMARYQSGKN
                     TPDQVTIYMLEQSGRYGRAALESLKSDAGFMKDPKRARDLLMALDGEQHLQEQVSEKV
                     LAENVLIAPGSVKPDVTFWSALIQDRYNVMTCIEKDACVLVEQDLNSDGQAERILFAF
                     NDDRVIVYGFDSDRKEWDALDMSLLPNEITKEKLLTAAKDGKLGTRPKAWRDLTVDGE
                     TLEINLSK"
     gene            complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JN001_000631"
     CDS             complement(9241..10119)
                     /gene="hslO"
                     /locus_tag="JN001_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417860.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HAY9051959.1"
                     /translation="MPQHDQLHRYLFENFAVRGELVTVSETLQQILENHDYPQPVKNV
                     LAELLVATSLLTATLKFDGDITVQLQGDGPMNLAVINGNNNQQMRGVARVQGEIPENA
                     DLKTLVGNGYVVITITPSEGERYQGVVGLEGDTLAACLEDYFMRSEQLPTRLFIRTGD
                     VDGKPAAGGMLLQVMPAQNAQQDDFDHLATLTETIKTEELLTLPANEVLWRLYHEEEV
                     TVYDPQDVEFKCTCSREHCADALKTLPDEEVDSILAEDGEIDMHCDYCGNHYLFNAMD
                     IAEIRNNASPADPQVH"
     gene            complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JN001_000632"
     CDS             complement(10144..10545)
                     /gene="hslR"
                     /locus_tag="JN001_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated heat shock protein Hsp15"
                     /protein_id="HAY9051960.1"
                     /translation="MKEKPAVEVRLDKWLWAARFYKTRALAREMIEGGKVHYNGQRSK
                     PSKIVELNATLTLRQGNDERTVIVKAITEQRRPASEAALLYEETAESVEKREKMAMAR
                     KLNALTMPHPDRRPDKKERRDLLRFKHGDSE"
     gene            complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JN001_000633"
     CDS             complement(10556..11224)
                     /gene="yrfG"
                     /locus_tag="JN001_000633"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP/IMP nucleotidase"
                     /protein_id="HAY9051961.1"
                     /translation="MHINIAWQDVDTVLLDMDGTLLDLAFDNYFWQKLVPETWGAKNG
                     VTPQEAMEYMRQQYHDVQHTLNWYCLDYWSEQLGLDICAMTTEMGPRAVLREDTIPFL
                     EALKASGKQRILLTNAHPHNLAVKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWHAVAE
                     ATGLKAERTLFIDDSEAILDAAAQFGIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLI
                     PSLM"
     gene            complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JN001_000634"
     CDS             complement(11289..13424)
                     /gene="igaA"
                     /locus_tag="JN001_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="intracellular growth attenuator protein IgaA"
                     /protein_id="HAY9051962.1"
                     /translation="MSTIVIFLAALLACSLLAGWLIKVRSRRSQLPWTNAFADAQTRK
                     LTPEERSAVENYLESLTQVLQVPGPTGASAAPISLALNAESNNVMMLTHAITRYGIST
                     DDPNKWRYYLDSVEVHLPPFWEQYINDENTVELIHTDSLPLVISLNGHTLQEYMQETR
                     GYALQPVPSTQASIRGEESEQIELLNIRKETHEEYALSRPRGLREALLIVASFLMFFF
                     CLITPDVFVPWLAGGALLLLGAGLWGLFAPPAKSSLREIHCLRGTPRRWGLFGENDQE
                     QINNISLGIIDLVYPAHWQPYIAQDLDQQTDIDIYLDCHVVRQGRYLSLHDEVKNFPL
                     QHWLRSTIIAAGSLLVLFMLLFWIPLDMPLKFTLSWMKGAQTIEATSVKQLADAGVRV
                     GDTLRISGTGMCNIRTSGTWSAKTNSPFLPFDCSQIIWNDARSLPLPESELVNKATAL
                     TEAVNRQLHPKPEDESRVSASLRSAIQKSGMVLLDDFGDIVLKTADLCSAKDDCVRLK
                     NALVNLGNSKDWDALVKRANAGKLDGVNVLLRPVSAESLDNLVATSTAPFITHETARA
                     AQSLNSPAPGGFLIVSDEGSDFVDQPWPSASLYDYPPQEQWNAFQKLAQMLMHTPFNA
                     EGIVTKIFTDANGTQHIGLHPIPDRSGLWRYLSTTLLLLTMLGSAIYNGVQAWRRYQR
                     HRTRMMEIQAYYESCLNPQLITPSESLIE"
     gene            13744..14304
                     /gene="nudE"
                     /locus_tag="JN001_000635"
     CDS             13744..14304
                     /gene="nudE"
                     /locus_tag="JN001_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP compounds hydrolase NudE"
                     /protein_id="HAY9051963.1"
                     /translation="MSKSLQKPTILNVETVARSRLFTVESVDLEFSNGVRRVYERMRP
                     TNREAVMIVPIVDDHLILIREYAVGTESYELGFSKGLIDPGESVYEAANRELKEEVGF
                     GANDLTFLKKLSMAPSYFSSKMNIVVAQDLYPESLEGDEPEPLPQVRWPLAHMMDLLE
                     DPDFNEARNVSALFLVREWLKGQGRV"
     gene            complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JN001_000636"
     CDS             complement(14469..17021)
                     /gene="mrcA"
                     /locus_tag="JN001_000636"
                     /EC_number="2.4.1.129"
                     /EC_number="3.4.16.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312265.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase/peptidoglycan
                     DD-transpeptidase MrcA"
                     /protein_id="HAY9051964.1"
                     /translation="MKFVKYFLILAVCCILLGAGSIYGLYRYIEPQLPDVATLKDVRL
                     QIPMQIYSADGELIAQYGEKRRIPVTLDQIPPEMVKAFIATEDSRFYEHHGVDPVGIF
                     RAASVALFSGHASQGASTITQQLARNFFLSPERTLMRKIKEVFLAIRIEQLLTKDEIL
                     ELYLNKIYLGYRAYGVGAAAQVYFGKTVDQLTLNEMAVIAGLPKAPSTFNPLYSMDRA
                     VARRNVVLSRMLDEGYITQQQFDQTRTEAINANYHAPEIAFSAPYLSEMVRQEMYNRY
                     GESAYEDGYRIYTTITRKVQQAAQQAVRNNVLDYDMRHGYRGPANVLWKVGESAWDNN
                     KITDTLKALPTYGPLLPAAVTSANPQGATAMLADGSTVALSMEGVRWARPYRSDTQQG
                     PTPRKVTDVLQTGQQIWVRQVGDAWWLAQVPEVNSALVSINPQNGAVMALVGGFDFNQ
                     SKFNRATQALRQVGSNIKPFLYTAAMDKGLTLASMLNDVPISRWDAGAGSDWQPKNSP
                     PQYAGPIRLRQGLGQSKNVVMVRAMRAMGVDYAAEYLQRFGFPAQNIVHTESLALGSA
                     SFTPMQVARGYAVMANGGFLVDPWFISKIENDQGGVIFEAKPKVACPECDIPVIYGDT
                     QKSNVLENNDVEDVAISREQQNVSVPMPQLEQANQALVAKTGAQEYAPHVINTPLAFL
                     IKSALNTNIFGEPGWQGTGWRAGRDLQRRDIGGKTGTTNSSKDAWFSGYGPGVVTSVW
                     IGFDDHRRNLGHTTASGAIKDQISGYEGGAKSAQPAWDAYMKAVLEGVPEQPLTPPPG
                     IVTVNIDRSTGQLANGGNSREEYFIEGTQPTQQAVHEVGTTIIDNGEAQELF"
     gene            17141..17920
                     /gene="hofM"
                     /locus_tag="JN001_000637"
     CDS             17141..17920
                     /gene="hofM"
                     /locus_tag="JN001_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417854.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofM"
                     /protein_id="HAY9051965.1"
                     /translation="MAFKIWQIGLHLQQQEAVAVAIVRGAKECFLQRWWRLPLENDII
                     KDGRIVDAQQLAKTLLPWSRELPQRHHIMLAFPASRTLQRSFPRPSMSLGEREQTAWL
                     SGTMARELDMDPDSLRFDYSEDSLSPAYNVTAAQSKELATLLTLAERLRVHVSAITPD
                     ASALQRFLPFLPSHQQCLAWRDNEQWLWATRYSWGRKLAVGMTSAKELAAALFVDPDS
                     VAICGEGGFDPWEAVSVRQPLLPPPGGDFAIALGLALGKAY"
     gene            17920..18459
                     /locus_tag="JN001_000638"
     CDS             17920..18459
                     /locus_tag="JN001_000638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PilN domain-containing protein"
                     /protein_id="HAY9051966.1"
                     /translation="MNPPINFLPWRQQRRTAFLRFWLLMFVAPLLLAVGITLILRLTG
                     SAEARIDAVLLQAEQQLARSLQITKPRLLEQQQLRKQRSQRQRQRQFTRDWQSALEAL
                     AALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQ
                     GRWQFEYQLTRKVSDEHVL"
     gene            18443..18883
                     /gene="hofO"
                     /locus_tag="JN001_000639"
     CDS             18443..18883
                     /gene="hofO"
                     /locus_tag="JN001_000639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofO"
                     /protein_id="HAY9051967.1"
                     /translation="MNMFFDWWFATSPRLRQFCWAFWLLMLVTLIFLSSTHHEERDAL
                     IRLRASHHQQWATLYRLVDTTPFSEEKTLPFSPLDFQLPGAQLVSWHPSAQGGELALK
                     TLWEAVPSAFTRLAERNVSVSRFSLSVEGDDLLFTLQLETPHEG"
     gene            18873..19277
                     /gene="hofP"
                     /locus_tag="JN001_000640"
     CDS             18873..19277
                     /gene="hofP"
                     /locus_tag="JN001_000640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417851.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein HofP"
                     /protein_id="HAY9051968.1"
                     /translation="MRVKRWLLAGIALCLLTGMRDPFKPPEDLCRISELSQWRYQGMV
                     GRGERIIGVIKDGQKKWRRVQQNDVLENGWTILQLTPDVLTLGTGTNCEPPQWLWQRQ
                     GDTNEAMDSRTTVDADTRRTGGKAAKSDADGG"
     gene            19189..20427
                     /gene="hofQ"
                     /locus_tag="JN001_000641"
     CDS             19189..20427
                     /gene="hofQ"
                     /locus_tag="JN001_000641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA uptake porin HofQ"
                     /protein_id="HAY9051969.1"
                     /translation="MKQWIAALLLMLIPGVQAAKPQKVTLMVDDVPVAQVLQALAEQE
                     KLNLVVSPDVSGTVSLHLTDVPWKQALQTVVKSAGLITRQEGNILSVHSIAWQNNNIA
                     RQEAEQARAQANLPLENRSITLQYADAGELAKAGEKLLSAKGSMTVDKRTNRLLLRDN
                     KTALSALEQWVAQMDLPVGQVELSAHIVTINEKSLRELGVKWTLADAQHAGGVGQVTT
                     LGSDLSVATATTHVGFNIGRINGRLLDLELSALEQKQQLDIIASPRLLASHLQPASIK
                     QGSEIPYQVSSGESGATSVEFKEAVLGIEVTPTVLQKGRIRLKLHISQNVPGQVLQQA
                     DGEVLAIDKQEIETQVEVKSGETLALGGIFTRKNKSGQDSVPLLGDIPWFGQLFRHDG
                     KEYERRELVVFITPRLVSSE"
     gene            20828..21349
                     /gene="aroK"
                     /locus_tag="JN001_000642"
     CDS             20828..21349
                     /gene="aroK"
                     /locus_tag="JN001_000642"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004709337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase AroK"
                     /protein_id="HAY9051970.1"
                     /translation="MAEKRNIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEIEKRTG
                     ADVGWVFDLEGEEGFRDREEKVINELTEKQGIVLATGGGSVKSRETRNRLSARGVVVY
                     LETTIEKQLARTQRDKKRPLLHVETPPREVLEALANERNPLYEEIADVTIRTDDQSAK
                     VVANQIIHMLESN"
     gene            21406..22494
                     /gene="aroB"
                     /locus_tag="JN001_000643"
     CDS             21406..22494
                     /gene="aroB"
                     /locus_tag="JN001_000643"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HAY9051971.1"
                     /translation="MERIVVTLGERSYPITIASGLFNEPASFLPLKSGEQVMLVTNET
                     LAPLYLDKVRGVLEQAGVNVDSVILPDGEQYKSLAVLDTVFTALLQKPHGRDTTLVAL
                     GGGVVGDLTGFAAASYQRGVRFIQVPTTLLSQVDSSVGGKTAVNHPLGKNMIGAFYQP
                     ASVVVDLDCLKTLPPRELASGLAEVIKYGIILDGAFFNWLEENLDALLRLDGPAMAYC
                     IRRCCELKAEVVAADERETGLRALLNLGHTFGHAIEAEMGYGNWLHGEAVAAGMVMAA
                     RTSERLGQFSSAETQRIITLLKRAGLPVNGPREMSAQAYLPHMLRDKKVLAGEIRLIL
                     PLAIGKSEVRSGVSHELVLNAIADCQSA"
     gene            22586..23872
                     /gene="damX"
                     /locus_tag="JN001_000644"
     CDS             22586..23872
                     /gene="damX"
                     /locus_tag="JN001_000644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DamX"
                     /protein_id="HAY9051972.1"
                     /translation="MDEFKPEDELKPDPSDRRTGRSRQSSERSERTERGEPQINFDDI
                     ELDDTDDRRPTRAQKERNEEPEIEEEIDESEDETVDEERVERRPRKRKKAASKPASRQ
                     YMMMGVGILVLLLLIIGIGSALKAPSTSSSDQTASGDKSIDLAGNATDQANGVQPAPG
                     TTSAENTQQDVSLPPISSTPTQGQTPAATDGQQRVEVQGDLNNALTQPQNQQQLNNVA
                     VNSTLPTEPATVAPVRNGNASRDTAKTQTAERPSTTRPARQQAVIEPKKPQATVKTEP
                     KPVAQTPKRTEPAAPVASTKAPAATSTPAPKETATTAPVQTASPAQTTATPAAGGKTA
                     GNVGSLKSAPSSHYTLQLSSSSNYDNLNGWAKKENLKNYVVYETTRNGQPWYVLVSGV
                     YASKEEAKKAVSTLPADVQAKNPWAKPLRQVQADLK"
     gene            23979..24815
                     /gene="dam"
                     /locus_tag="JN001_000645"
     CDS             23979..24815
                     /gene="dam"
                     /locus_tag="JN001_000645"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY9051973.1"
                     /translation="MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLN
                     TDFSRYILADINSDLISLYNIVKMRTDEYVQAARELFVPETNCAEVYYQFREEFNKSQ
                     DPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKKPYFPEAELYHFAEKAQNAFF
                     YCESYADSMARADDASVVYCDPPYAPLSATANFTAYHTNSFTLEQQAHLAEIAEGLVE
                     RHIPVLISNHDTMLTREWYQRAKLHVVKVRRSISSNGGTRKKVDELLALYKPGVVSPA
                     KK"
     gene            24833..25510
                     /gene="rpe"
                     /locus_tag="JN001_000646"
     CDS             24833..25510
                     /gene="rpe"
                     /locus_tag="JN001_000646"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HAY9051974.1"
                     /translation="MKQYLIAPSILSADFARLGEDTAKALAAGADVVHFDVMDNHYVP
                     NLTIGPMVLKSLRNYGITAPIDVHLMVKPVDRIVPDFAAAGASIITFHPEASEHVDRT
                     LQLIKENGCKAGLVFNPATPLSYLDYVMDKLDVILLMSVNPGFGGQSFIPQTLDKLRE
                     VRRRIDESGFDIRLEVDGGVKVNNIGEIAAAGADMFVAGSAIFDQPDYKKVIDEMRSE
                     LAKVSHE"
     gene            25503..26261
                     /gene="gph"
                     /locus_tag="JN001_000647"
     CDS             25503..26261
                     /gene="gph"
                     /locus_tag="JN001_000647"
                     /EC_number="3.1.3.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycolate phosphatase"
                     /protein_id="HAY9051975.1"
                     /translation="MNKFEDIRGVAFDLDGTLVDSAPGLAAAVDMALYALELPVAGEE
                     RVITWIGNGADVLMERALAWARQERATLRKTMGKPPVDDDIPAEEQVRILRKLFDRYY
                     SEVAEEGTFLFPHVADTLGALQAKGLPLGLVTNKPTPFVAPLLEALDIAKYFSVVIGG
                     DDVQNKKPHPDPLLLVAERMGIAPQQMLFVGDSRNDIQAAKAAGCPSVGLTYGYNYGE
                     AIDLSQPDVIYQSINDLLPALGLPHSENQESKND"
     gene            26254..27258
                     /gene="trpS"
                     /locus_tag="JN001_000648"
     CDS             26254..27258
                     /gene="trpS"
                     /locus_tag="JN001_000648"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HAY9051976.1"
                     /translation="MTKPIVFSGAQPSGELTIGNYMGALRQWVNMQDDYHCIYCIVDQ
                     HAITVRQDAQKLRKATLDTLALYLACGIDPEKSTIFVQSHVPEHAQLGWALNCYTYFG
                     ELSRMTQFKDKSARYAENINAGLFDYPVLMAADILLYQTNLVPVGEDQKQHLELSRDI
                     AQRFNALYGEIFKVPEPFIPKSGARVMSLLEPTKKMSKSDDNRNNVIGLLEDPKSVVK
                     KIKRAVTDSDEPPVVRYDVQNKAGVSNLLDILSAVTGQSIPELEKQFEGKMYGHLKGE
                     VADAVSGMLTELQERYHRFRNDEAFLQQVMKDGAEKASVHASRTLKAVYEAIGFVAKP
                     "
     gene            27527..28432
                     /locus_tag="JN001_000649"
     CDS             27527..28432
                     /locus_tag="JN001_000649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709156.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051977.1"
                     /translation="MRRTFIKKEGVVITTLARYLLGEKCGNRLKTIDELATECRSSVG
                     LTQAALKTLESSGAIRIERRGRNGSYLVEMDNKALLSHVDINNVVCAMPLPYTRLYEG
                     LASGLKAQFDGIPFYYAHMRGADIRVECLLNGVYDMAVVSRLAAESYLSQNNLCIALE
                     LGPHTYVGEHQLICRKGESGNVKRVGLDSRSADQKIMTDVFFGDSDVERVDLSYHESL
                     QRIVKGDVDAVIWNVVAENELTMLGLEATPLTDDPRFLQATEAVVLTRVDDYPMQQLL
                     RAVVDKHALLAHQQRVVSGEQEPSY"
     gene            28449..28811
                     /locus_tag="JN001_000650"
     CDS             28449..28811
                     /locus_tag="JN001_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417841.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HAY9051978.1"
                     /translation="METRLNLLCEAGVIDKDICKGMMQVVNVLETECHLPVRSEQGTM
                     AMTHMASALMRSRRGEEIEPLDNELLAELAQSSHWQAVVQLHQVLLKEFALEVNPCEE
                     GYLLANLYGLWMAANEEV"
     gene            28895..30058
                     /locus_tag="JN001_000651"
     CDS             28895..30058
                     /locus_tag="JN001_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfX family PLP-dependent enzyme"
                     /protein_id="HAY9051979.1"
                     /translation="MFVEALKRQNPALISAALSLWQQGKIAPDSWVIDVDQVLENGKR
                     LIETARLYGIELYLMTKQFGRNPWLAEKLLALGYSGIVAVDYKEARVMRRAGLSVAHQ
                     GHLVQIPCHQVADAVEQGTDVITVFTLDKAREVSAAAVKAGRVQFVLLKVYSDDDFLY
                     PGQESGFVQHSLHEVVAEIKKLPGLHLAGLTHFPCLLWDEAAGKVLPTPNLHTLIQAR
                     DQLAKSGIALEQLNAPSATSCTSLPLLAQYGVTHAEPGHALTGTIPANQQGDQSERIA
                     MLWLSEISHHFRGDSYCYGGGYYRRGHAQHALVFTPENQKITETNLKTVDDSSIDYTL
                     SLAGEFPVSSAVVLCFRTQIFVTRSDVVLVSGIHRGEPKIVGRYDSLGNSLGA"
     gene            30058..31284
                     /locus_tag="JN001_000652"
     CDS             30058..31284
                     /locus_tag="JN001_000652"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY9051980.1"
                     /translation="MARFVVLVIDSFGVGAMKDVTLVRPQDAGANTCGHILSQLPHLQ
                     LPTLEKLGLINALGYAPGDMQPSDSATWGVAELQHEGGDTFMGHQEILGTRPLPPLRM
                     PFCDVIDRVEQALVSAGWQVERRGDELQFLWVNQAVAIGDNLEADLGQVYNITANLSV
                     ISFDDAIKIGRIVREQVQVGRVITFGGLLTDSQRILDAAESKEGRFIGINAPRSGAYD
                     NGFQVVHMGYGVDKKVQVPQKLYEAGVPTVLVGKVADIVSNPYGVSWQNLVDSQRIMD
                     ITLDEFNTHPTAFICTNIQETDLAGHAEDVARYAERLQVVDRNLARLVDAMQPDDCLV
                     VMADHGNDPTIGHSHHTREVVPLLVYQQGLAATQLGVRTTLSDVGATVCEFFRAPPPQ
                     NGRSFLSSLRFAGDTL"
     gene            31281..32159
                     /locus_tag="JN001_000653"
     CDS             31281..32159
                     /locus_tag="JN001_000653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase-related protein"
                     /protein_id="HAY9051981.1"
                     /translation="MSFDPTGYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLM
                     TRGVRNVIEMTNRYMGRNAQFMLGVMRETGINVVACTGYYQDAFFPEHVVTRSVQELA
                     QEMVDEIEQGIDGTELKAGLIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTS
                     FSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYP
                     DEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYLLTTFIPQLRQSGFSQ
                     ADVDVMLRETPSQFFQ"
     gene            32170..32523
                     /locus_tag="JN001_000654"
     CDS             32170..32523
                     /locus_tag="JN001_000654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417837.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2620 domain-containing protein"
                     /protein_id="HAY9051982.1"
                     /translation="MKKIGVAGLQREQIKKTIEATAPGSFEVFIHNDMEAAMKVKSGQ
                     LDYYIGACNTGAGAALSIAIAVIGYNKSCTIAKPGIKAKDEHIAKMIAEGKVAFGLSV
                     EHVEHAIPMLINHLK"
     gene            32535..33839
                     /locus_tag="JN001_000655"
     CDS             32535..33839
                     /locus_tag="JN001_000655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9051983.1"
                     /translation="MDLYIQIIVVACLTGMTSLLAHRSAAVFHDGIRPILPQLIEGYM
                     NRREAGSIAFGLSIGFVASVGISFTLKTGLLNAWLLFLPTDILGVLAINSLMAFGLGA
                     IWGVLILTCLLPVNQLLTALPVDVLGSLGELSSPVVSAFALFPLVAIFYQFGWKQSLV
                     AAVVVLMTRVVVVRYFPHLNPESIEIFIGMVMLLGIAITHDLRHRDENDIDASGLSVF
                     EERTSRIIKNLPYIAIVGALIAAVASMKIFAGSEVSIFTLEKAYSAGVTPEQSQTLIN
                     QAALAEFMRGLGFVPLIATTALATGVYAVAGFTFVYAVGYLSPNPMVAAVLGAVVISA
                     EVLLLRSIGKWLGRYPSVRNASDNIRNAMNMLMEVALLVGSIFAAIKMAGYTGFSIAV
                     AIYFLNESLGRPVQKMAAPVVAVMITGILLNVLYWLGLFVPA"
     gene            33851..34936
                     /locus_tag="JN001_000656"
     CDS             33851..34936
                     /locus_tag="JN001_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HAY9051984.1"
                     /translation="MKTFPLQSLTLIEAQQKQFALVDTICRHFPGAEFLTSGDLGLTP
                     GLNQPRITQRVEQVLADAFHAQAAALVQGAGTGAIRAGLAALLKPGQRLLVHDAPVYP
                     TTRVIIEQMGLTLITVDFNDLSALKQVVDEQQPDAALVQHTRQQPQDSYVLADVLATL
                     RAAGVPALTDDNYAVMKVARIGCECGANVSTFSCFKLFGPEGVGAVVGDADVINRIRA
                     TLYSGGSQIQGAQALEVLRCLVFAPVMHAVQAGVSERLLALLNGGEVPEVKSAVIANA
                     QSKVLIVEFHQPIAARVLEEAQKRGALPYPVGAESKYEIPPLFYRLSGTFRQANPQSE
                     HCAIRINPNRSGEETVLRILRESIASI"
     gene            complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JN001_000657"
     CDS             complement(35088..35819)
                     /gene="phoB"
                     /locus_tag="JN001_000657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417834.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator PhoB"
                     /protein_id="HAY9051985.1"
                     /translation="MSATDRYSHQLLYATVRQRLLDDIAQGVYQAGQQIPTENELCTQ
                     YNVSRITIRKAISDLVADGVLIRWQGKGTFVQSQKVENALLTVSGFTDFGVSQGKATK
                     EKVIEQERVSAAPFCKKLNIPGNSEVFHLCRVMYLDKEPLFIDSSWIPLSRYPDFDEI
                     YVEGSSTYQLFQERFDTRVVSDKKTIDIFAATRPQAKWLKCELGEPLFRISKIAFDQN
                     DKPVHVSELFCRANRITLTIDNKRH"
     gene            complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JN001_000658"
     CDS             complement(35919..36704)
                     /gene="frlD"
                     /locus_tag="JN001_000658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-kinase"
                     /protein_id="HAY9051986.1"
                     /translation="MKTLATIGDNCVDIYPQLNKAFSGGNAVNVAVYCTRYGIQPGCI
                     TWVGDDDYGTKLKQDLARMGVDISHVHTKHGVTAQTQVELHDNDRVFGDYTEGVMADF
                     ALSEEDYAWLAQYDIVHAAIWGHAEDAFPQLHAAGKLTAFDFSDKWDSPLWQTLVPHL
                     DFAFASAPQEDETLRLKMKAIVARGAGTVIVTLGENGSIAWDGAQFWRQAPEPVTVID
                     TMGAGDSFIAGFLCGWSAGMTLPQAMAQGTACAAKTIQYHGAW"
     gene            complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JN001_000659"
     CDS             complement(36701..37531)
                     /gene="frlC"
                     /locus_tag="JN001_000659"
                     /EC_number="5.1.3.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 3-epimerase"
                     /protein_id="HAY9051987.1"
                     /translation="MKTGMFTCGHQRLPIEHAFRDASELGYDGIEIWGGRPHAFAPDL
                     KAGGIKQIKALAQTYQMPIIGYTPETNGYPYNMMLGDEHMRRESLDMIKLAMDMAKEM
                     NAGYTLISAAHAGYLTPPNVIWGRLAENLSELYEYAENIGMDLILEPLTPYESNIVCN
                     ANDVLHALALVPSPRLFSMVDICAPYVQAEPVMSYFDKLGDKLRHLHIVDSDGASDTH
                     YIPGEGKMPLRELMRDIIERGYEGYCTVELVTMYMNEPRLYARQALERFRALLPEDER
                     "
     gene            complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JN001_000660"
     CDS             complement(37581..38603)
                     /gene="frlB"
                     /locus_tag="JN001_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417830.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine 6-phosphate deglycase"
                     /protein_id="HAY9051988.1"
                     /translation="MLDIDKSTVDFLVTENMVQEVEKVLSHDVPLVHAIVEEMVKRDI
                     DRIYFVACGSPLNAAQAAKHLADRFSDLQVYAISGWEFCDNTPYRLDDRCAVIGVSDY
                     GKTEEVIKALELGRACGALTAAFTKRADSPITSAAEFSIDYQADCIWEIHLLLCYSVV
                     LEMITRLAPNAEIGKIKNDLKQLPNALGHLVRTWEEKGRQLGELASQWPMIYTVAAGP
                     LRPLGYKEGIVTLMEFTWTHGCVIESGEFRHGPLEIVEPGVPFLFLLGNDESRHTTER
                     AINFVKQRTDNVIVIDYAEISQGLHPWLAPFLMFVPMEWLCYYLSIYKDHNPDERRYY
                     GGLVEY"
     gene            complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JN001_000661"
     CDS             complement(38624..40012)
                     /gene="frlA"
                     /locus_tag="JN001_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001324580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructoselysine/psicoselysine transporter"
                     /protein_id="HAY9051989.1"
                     /translation="MTANSPLQRVGQEKGIAMGSQELQRKLGFWAVLAIAVGTTVGSG
                     IFVSVGEVAKAAGTPWLTVLTFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGS
                     RPLAFLSGWASFWANDAPSLSIMALAIVSNLGFLTPIDPLPGKFIAAGLIIAFMLLHL
                     RSVEGGAAFQTLITIAKIIPFTIVIGLGIFWFKAENFAAPTTTAIGATGSFMALLAGI
                     SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISDLMPFDKL
                     ANSETPISDALTWIPALGSTAGIFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFF
                     KCFGHVHPKYNTPDVSIILQGALGLFFIFVSDLTSLLGYFTLVMCFKNTLTFGSIIWC
                     RKRDDYKPLWRTPAFGLMTTLAIASSLILVASTFVWAPIPGLICAVIVIATGLPAYAF
                     WAKRSRQLNALS"
     gene            complement(40257..40424)
                     /locus_tag="JN001_000662"
     CDS             complement(40257..40424)
                     /locus_tag="JN001_000662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfL family protein"
                     /protein_id="HAY9051990.1"
                     /translation="MNKFIKVALVGAVLATLTACTGHIENRDKNCSYDYLLHPAISIS
                     KIIGGCGPTAQ"
BASE COUNT         9347 a        10256 c        11119 g         9703 t
ORIGIN      
        1 tgtggaataa aaaggccgga gatattctcc ggcactttta tgtcaggcaa ggcgttcgtt
       61 gccagatgcg gcgtgaacgc cttatcgcgc aggtttaggg gccagtccgg gcgtttaacg
      121 ttttttgccc attgccgccg ccagcgcatc catcatcgcg ctattaccgg caggctgcgc
      181 ttcacgaccg cgtggtttgg ctgccgggcg gttgttttgc gggcgttcat taccgccgcc
      241 gcgacgggcg ttggtttcgc caggctgctc gtccagacgc atagtcaggg cgatacgttt
      301 acgctgaaga tccacttcca gcactttcac cttcacaatg tcgcccgctt tcaccacggt
      361 atgcggatct tccacaaact tgttcgacaa tgaagagatg tgaaccaggc cgtcctgatg
      421 cacgccgata tcgacaaacg cgccaaagtt ggtgacgttg gtcaccgcac cttcgaggat
      481 catacccggt tgcaggtcgt tcattgtctc gacgccatcg gcaaactgag cggttttaaa
      541 ttccggacgc ggatcgcgac ccggtttttc cagctctttg atgatgtcag ttactgtcgg
      601 cacaccgaat ttttcatcag taaagtcaga cgctttcagg ttacgcagtt cgctgctgtt
      661 acccatcaga tctttcagtg cctgctgtgt tgctgccaga atgcgttcca ccaccggata
      721 ggcttccggg tggacggtag aagcatccag cgggttatca ccgtggttaa tgcgcaagaa
      781 gcccgcgcac tgctcgaagg ctttcggccc cagacggctg actttcagca gttgctgacg
      841 gttctggaac tggccgttct catcgcgcca ggccacgatg ttttgcgcca tcatgcgcgt
      901 caggcccgcc acgcgggtta acagcggaac agaagcagtg ttgagatcga cgccaacggc
      961 gtttacgcag tcttctacta ctgcgtccag tttgcgggcc agttgcgtct ggctgacgtc
     1021 atgctgatac tgacctacgc cgatagattt cggatcgatt ttcaccagct ccgccagcgg
     1081 atcctgcaaa cggcgggcga tagacaccgc gccacgcagc gaaacgtcga gatccgggaa
     1141 ctcctgcgct gccagctcgg aagctgagta aaccgacgcg ccagcttcgc tgacgatcac
     1201 tttctgtgcg gtcactttcg ggaactgctt ctgcacgtcg agatagaaac gttcagtttc
     1261 gcgggaagct gtaccgttgc cgatcgccac cagttcaacg ttatgttttt cacacaaggc
     1321 agcaacggtc atcgctgctt ttgcggcttg tccggtgtgc gggtaaatgg tatcggtcgc
     1381 taccagtttg ccagtggcat cgaccaccgc cacttttacc ccagtacgca gacccggatc
     1441 gaggcccatc gttgcacgca gtccggcagg ggccgccatc agcagatcgt gcaggttacg
     1501 ggcaaagacg ttgattgctt catcttccgc gcgttcgcgc acggtaccca tcagttcggt
     1561 ttccagatgc atcagcacct tgatgcgcca ggtccagctc actacgcctt tgcgccagct
     1621 atccgccggg gcattgttca ggcgcaggcc aaggtgatcc atgatgattt gctcgcaata
     1681 gctctctttg ggcggctcat cgaactgcgg atcggcattc agcgaaagct ggagtacgcc
     1741 ttcgttacgc ccacggaaca tcgccagagc gcggtgagaa ggcaccgtgg acaacggttc
     1801 gtgatgatcg aaatagtcgc ggaatttcgc cccttcctct tctttaccgc tcaccaccgt
     1861 agaaaccaaa tgcgcgttct tccacagata atcacgcact ttcgccagca gcgcggcatc
     1921 ttcggcaaac cgttccatca ggatatagcg cgcgccatcc agcgcggctt tggtatctgc
     1981 cacgccttta tcggcatcaa catattgtgc agcggcgact tctggcgtgt gtgacggatc
     2041 gctccacagc aggtcagcca acggctcaag ccctgcttca atggcgattt gcccgcgggt
     2101 gcggcgttta ggtttgtagg gcaggtagag gtcttcgagt tcggttttgc ttagggtggc
     2161 gttgatggcc ttcgccagat catcggtgag tttgccttgc tcggaaatgg acttgaggat
     2221 cgcctgacgt ctctcttcca gctcgcgcag atagctcaga cgcgtttcca gattacgcag
     2281 ctgcgtgtca tccagaccgc cggtgatttc cttacgataa cgtgtgataa acggcacggt
     2341 attcccttcg tcaagcaggc gaacggcagc gtcaacctgt tccgggcgcg cctgaatttc
     2401 acccgcaata atgcggcaga acgaatcatt catcatggtt tgagttcatc ttttcggatc
     2461 aaaaatcagg ggatagttat acggactggc tggcaaaaat gccagccatc ggcaggaggt
     2521 taagactctt ccttacggtt tcacgtactc gatagcatta acataccagc tcgcttcccc
     2581 ggcaggggta ttcaccaccg ccagatcgcc gacttctttt ttcagcaatg cgcgggccat
     2641 cggggaatcg atagagatgt aatctttacg gccaaaaatt tcatcgtagc cgacaatacg
     2701 gaaacggtga gtcacgccat cgtcgttttc aatctccacc cacgcgccaa aaaagacttt
     2761 gccttcctgc tgaggggagt aatcgacgat tttgagattt tccatgcatt tagtgagata
     2821 gcgcacgcga cggtcgattt cacgcagacg ctttttatta tactgatagt cagcattttc
     2881 gctgcggtcg cccagacttg cggcccaggt cacctttttt gtgacctccg ggcgttcttc
     2941 acgccagaga taattaagct cttgtttgag tttttcatac ccttcccggg taaccagggg
     3001 cgttttcatc tcgttgattc cctttgtctg tttgataatg cgcacattgg gtataacgtg
     3061 atcatatcaa cagaatcaat aatgtttcgc cgaataaatt gtatacttaa gctgctgttt
     3121 aatatgcttt gtaacaattt aggctgaaat tcataccaga tttagctggt gacgaacgtg
     3181 agctttttta agaatacacg cttacaaatt gttgcgaacc tttgggagta caaacaatgc
     3241 aagagaacta caagattctg gtggtcgatg acgacatgcg cctgcgtgcg ctgctggaac
     3301 gttatctcac cgaacaaggc ttccaggttc gaagcgtcgc taatgcagaa cagatggatc
     3361 gcctgctgac tcgtgaatct ttccatctta tggtactgga tttaatgtta cctggtgaag
     3421 atggcttgtc gatttgccga cgtcttcgta gtcagagcaa cccgatgccg atcattatgg
     3481 tgacggcgaa aggggaagaa gtggaccgta tcgtaggcct ggagattggc gctgacgact
     3541 acattccaaa accgtttaac ccgcgtgaac tgctggcccg tattcgtgcg gtgctgcgtc
     3601 gtcaggcgaa cgaactgcca ggcgcaccgt cacaggaaga ggcggtaatt gctttcggta
     3661 agttcaaact taacctcggt acgcgcgaaa tgttccgcga agatgagccg atgccgctca
     3721 ccagcggtga gtttgcggta ctgaaggcac tggtcagcca tccgcgtgag ccgctctccc
     3781 gcgataagct gatgaacctt gcccgtggtc gtgaatattc cgcaatggaa cgctccatcg
     3841 acgtgcagat ttcgcgtctg cgccgcatgg tagaagaaga tccagcgcat ccgcgttaca
     3901 ttcagaccgt ttggggcctg ggctacgtct ttgtaccgga cggctctaaa gcatgaggcg
     3961 attgcgcttc tcgccacgaa gttcatttgc ccgtacgtta ttgctcatcg tcaccttgct
     4021 gttcgccagc ctggtgacga cttatctggt ggtgctgaac ttcgcgattt tgccgagcct
     4081 ccagcagttt aataaagtcc tcgcgtacga agtgcgtatg ttgatgaccg acaaactgca
     4141 actggaggac ggcacgcagt tggttgtgcc tcccgctttc cgtcgggaga tctaccgtga
     4201 gctggggatc tctctctact ccaacgaggc tgccgaagag gcaggtctgc gttgggcgca
     4261 acactatgaa ttcttaagcc atcagatggc acagcaactg ggcggcccga cggaagtgcg
     4321 cgttgaggtc aacaaaagtt cgcctgtcgt ctggctgaaa acctggctgt cgcccaatat
     4381 ctgggtacgc gtgccgctga ccgaaattca tcagggcgat ttctctccgc tgttccgcta
     4441 tacgctggcg attatgctat tggcgatagg cggggcgtgg ctgtttattc gtatccagaa
     4501 ccgaccgttg gtcgatctcg aacatgctgc tttgcaggtc ggtaaaggga ttattccacc
     4561 gccgctgcgt gaatatggcg cgtccgaggt acgttcggtt acccgcgcct ttaaccatat
     4621 ggcggctggt gttaagcaac tggcggatga ccgcacgctg ctgatggcgg gggtaagtca
     4681 tgacttacgc acgccgctga cgcgtattcg cctggcgacc gagatgatga gcgaacagga
     4741 tggctacctg gccgaatcga tcaataaaga tatcgaagag tgcaacgcca tcattgagca
     4801 gtttatcgac tacctgcgca ccgggcagga gatgccgatg gaaatggcgg atctcaacgc
     4861 agtactcggt gaggttattg ctgccgaaag tggctatgag cgggaaattg aaaccgcgct
     4921 ttaccccggc agcattgaag tgaaaatgca cccgctgtcg atcaaacgcg cggtggcgaa
     4981 tatggtggtc aacgccgccc gttacggcaa tggctggatc aaagtcagca gcgggacgga
     5041 gccgaatcgc gcctggttcc aggtggaaga tgacggtccg ggaattgcgc cggaacaacg
     5101 taagcacctg ttccagccgt ttgtccgcgg cgacagtgca cgcaccatta gcggcacggg
     5161 attagggctg gcaattgtgc agcgtatcgt ggataaccat aacgggatgc tggagcttgg
     5221 caccagcgag cggggcgggc tttccattcg cgcctggctg ccagtgccgg taacgcgggc
     5281 gcagggcacg acaaaagaag ggtaaataaa cgggaggcga aggtgcctcc cgttttgctt
     5341 tctataagat actggataga tattctccag cttcaaatca ttacagtttc ggaccagccg
     5401 ctaccagcgc ggcacccgca ggggtgtcgg tgtatttatc gaagttgtcg ataaacagtt
     5461 tcgccagggt ttcggctttt tcctgccact gttccggaga agcgtaggtg ttacgcggat
     5521 cgagaatctt cgtgtctacg cccggcagtt cggttgggat cgccaggtta aacatcggca
     5581 gagtgaaggt ttctgcatta tccagcgaac cgttgaggat ggcgtcgata atggcgcggg
     5641 tatctttaat cgagatacgt ttgcctgtgc cgttccagcc agtgttaacc agataagcct
     5701 gcgcgcccgc cgcctgcata cgtttcacca gcacttctgc gtactgagtc gggtgcagcg
     5761 acaggaatgc cgcgccgaag caagcggaga aggttggcgt cggttcggtg atgccacgct
     5821 cagtaccggc cagtttggcg gtgaagccag agaggaagtg atactgggtt tgatcggcag
     5881 tcaggcgaga aaccggcggc aacacgccga aagcatcagc agtcaggaag ataaccttag
     5941 tcgcgtggcc cgctttggaa accggcttaa cgatgttatc gatgtgatag attggataag
     6001 aaacgcgggt gttctcggtt tttgaaccat catcaaagtc gatagtgcca tcttcacgca
     6061 cggtgacgtt ttccagcagc gcatcacgac ggatagcgtt gtagatttca ggttccgctt
     6121 ctttcgacag cttgatagtt tttgcgtagc agccgccttc gaaattaaac acgccgtcat
     6181 cgtcccagcc gtgttcgtca tcgccaatca ggcggcgttt cgggtcggtg gaaagggtgg
     6241 ttttaccggt gccggaaagg ccgaagaaca ccgcaacatc gcctttctcg ccaacgttgg
     6301 cggagcagtg catagaagcg atacctttca gcggcagcag gtagttcatc atcgagaaca
     6361 tccctttctt catttcgccg ccgtaccagg tgccgccaat cagctgcatg cgctcggtca
     6421 ggttaaacgc cacgaagttt tcggagttca gaccctgttc tttccactgc gggttagtgc
     6481 acttcgcgcc gttcataacg ataaagtctg gtttgaaacc tgccagctct tcatcgctcg
     6541 ggcgaataaa catgtttttg acaaaatgcg cctgccaggc cacttcggtg atgaaacgga
     6601 cggaaagacg agtatccggg ttcgcaccac agaaagcgtc gacaacgaac agacgtttgc
     6661 cggaaagctg cctggtcacc aggcctttca gatgctgcca ggtttccgga gagagaggtt
     6721 tgttgtcgtt cttacctttg cctttgtctg cccaccagaa agtatcgcga gtggtatcgt
     6781 cacggacgat atacttatct tttggtgaac gaccggtgaa gatcccggta tcgacggcaa
     6841 cggcacccag attagttaac accccgcgct cataacctgt caggctcgga tcgagctctt
     6901 cctgatacag caggtcgtag cttgggttgt aaacgatatc atgtacgtca ctgataccat
     6961 aagcctcgag ttcttgcggg gtcaaaccat tgttaacgcg catttcactg ctccttagcc
     7021 aatatgtatt gcctgaatag taaagtcttt ttgggggtgt taaccgcgac aaggctcata
     7081 gatttacgta tctggagaaa ttcatatttg acaaaaaacc ccgtgattcc tgttacgaaa
     7141 cggttgctat tatcgcagaa atagcatttt aggtgtggaa aatgttctca aaaggttaaa
     7201 tcttggttta tatggcggga atattgtgag tggaatcgca ttccttaatg aaattgatgc
     7261 aaattcaatc ggtaaagtat cgattcacca cgctaacttt ttttgattat tttctgaaaa
     7321 aagcaaaata ctactgcccg gatgcgataa ttaacccacc ttttgattct ggataaccaa
     7381 catggataac gttgaacttt caccggcaac acgctggggg atgattgcta ccggattact
     7441 tcaggggctg gtttgctacc tgttgatcgc ctggcttgcc ggaaaaaatc acagttggat
     7501 tgtttatggc gtgcctgcga ccgttgcgtt ttcatccgtt ttactcttct ccgtgatctc
     7561 ttttaaacag aagcgccttt ggggatggct ggcgctggtg tttattgcca cgacagggat
     7621 gagcggttgg ctgaagtggc aaactgatgg catgaacccc tggagagctg aaaaggcgat
     7681 ttgggatttt ggctgctatc tgctgttgat ggcaatgttg ttgctaccgt ggatacaaca
     7741 aagccttcgt atccgcaatt gcagtagccg ctatagctac ttttaccagt cagtatggca
     7801 taacgtactt atattactgg tgatttttct cgccaatggc ctgacgtggc tggtgctttt
     7861 actgtggggt gagttgttta aacttgttgg catcaagttt ttcaatacgc tcttttttgc
     7921 aaccgactgg tttatgtatc ttacattagg tctggttacc gcactggcgg tgattctcgc
     7981 gcgcacacag tcacgtttaa tcgactctat tcaaaagttg ttcacgttaa tcgccacggg
     8041 gttgctgccg ttagtatcat tgctaaccct gatgtttatc atcactctgc cgtttacggg
     8101 cctgagcgcg atttctcgcc acatctccgc cgccgggttg ctgttaacgc tggccttttt
     8161 gcaattgatc ttaatggcta ttgtccgcga tccgcaaaaa gcgtcacttc cctggacggg
     8221 gccgttgcgt tgcctgatta aaaccgcttt gctggttgct ccgctgtatg tgttcgtcgc
     8281 cgcctgggcg ttatggctgc gggtcgctca gtacggctgg actgtcgacc gcttgcaggg
     8341 cgcgctggcg gtgctggtgt tactggtgtg gtcgctgggg tattttgtca gtatcgtctg
     8401 gcgtaatggg caaaatcccc ttgttcttca gggcaaagtg aaccttgcgg tttcgttatt
     8461 ggtgttggtg atactggtgc ttcttaattc gccggtgctg gacagtatgc gtattagcgt
     8521 gaacagtcat atggcgcgtt atcagagcgg caaaaacacg ccagaccagg taactatcta
     8581 catgctcgaa cagagcggtc gctatggacg tgcggcgctt gagtcgctga aaagcgatgc
     8641 cgggtttatg aaagacccga aacgcgcgcg ggatctgctg atggcgttag atggagagca
     8701 acatcttcag gaacaggtat cggaaaaagt attagccgaa aatgtgttaa ttgcccctgg
     8761 ttctgttaaa ccggatgtga cattctggtc ggccttaatc caggatcgct ataacgtgat
     8821 gacctgtatt gaaaaagacg cctgcgtcct ggtcgagcaa gatctgaata gtgatggtca
     8881 ggcggagcgg atcctgtttg cttttaatga tgacagagtc attgtctatg gctttgactc
     8941 agacagaaaa gaatgggacg cgcttgatat gagtttactt ccgaacgaaa taacgaaaga
     9001 aaaattactc acagctgcga aggatggaaa actggggacg aggccgaaag cgtggcgcga
     9061 tctgacggta gatggtgaaa cgctggaaat aaacttaagt aagtgacaac gcttttatcg
     9121 gatacgacgc tgtatctgac caaaataatt tgcgatttat ttcataggcg ctggtaagcg
     9181 cagcacatca ggccattaag ttgtaaaatc cggcagagcc ctctctgccg gacatactca
     9241 ttaatgaact tgcggatctg ccggagacgc gttgttgcgg atttcagcaa tatccatcgc
     9301 attgaacaga tagtggttac cgcagtaatc acaatgcatg tcaatttcgc catcttccgc
     9361 caggatgcta tcaacttctt catcaggcag cgttttcagc gcatcggcgc aatgttcacg
     9421 cgagcaggtg catttgaact ccacatcctg cggatcgtaa accgtcacct cttcttcgtg
     9481 atacaaacgc cacaacactt cgtttgccgg taaggtcagc agttcttcgg ttttgatggt
     9541 ttcggttagc gtcgccaggt ggtcaaagtc gtcctgctgg gcattttgcg caggcattac
     9601 ctgcaacaac ataccgcctg cagccggttt gccgtctacg tcgccggtgc gaataaacag
     9661 gcgcgtcggc agctgttcag aacgcataaa gtaatcttcc aggcaggccg ccagggtatc
     9721 accttccaga ccaactacgc cctgatagcg ttcgccttcg ctcggggtaa tggtgatcac
     9781 cacgtaacca ttgccgacca gcgttttcag gtcggcattt tctggaattt cgccctgcac
     9841 gcgcgccaca ccgcgcattt gctggttatt gttaccgtta ataaccgcca gattcatcgg
     9901 accgtcgccc tgcagctgta cggtgatatc accatcaaac ttcagcgtag cggttaacag
     9961 gctggtcgca accagcagtt ctgccagcac gtttttaacg ggctgcggat aatcgtggtt
    10021 ctcaaggatc tgttgcaggg tttccgaaac ggttaccagt tcgccgcgaa cggcaaaatt
    10081 ttcaaacaga tagcgatgta attggtcatg ttgcggcata atcatctctc ttgcaggtga
    10141 cagttattca ctgtcgccgt gtttaaatcg taacaggtcg cggcgctctt ttttgtccgg
    10201 gcgtcggtcc gggtgcggca tggttaaggc attaagttta cgtgccatcg ccattttttc
    10261 gcgtttctct acactttccg cagtctcttc atacagcaag gctgcctcgc tggcggggcg
    10321 acgctgttca gtaatcgcct ttacaatcac cgtgcgttcg tcatttccct ggcgcagagt
    10381 gagcgtggca ttcagctcga cgattttgct cggcttgctg cgctgcccgt tgtaatgcac
    10441 cttaccgcct tcaatcattt cacgggccag cgcgcgggtt ttataaaaac gggcagccca
    10501 tagccattta tccagtcgaa cctcaacagc aggtttctct ttcatggcgt ctccttcaca
    10561 ttagcgaggg gatcaggcgg cggtagtcat tcagtgacgg atggcgttga tactgtttct
    10621 cggcaatccc ggaatcagga ttagtcacgc cgaggcagta acgaatacca aattgcgcgg
    10681 cagcatcgag aatcgcttcg ctgtcatcaa taaacagcgt tctttcagct ttcagacccg
    10741 tagcttcggc caccgcatgc cataaccgct gatcctcttt cggataacca aatgtgtggg
    10801 tggaaagtaa taaatcaagg tgtgcgtcca gacccgtatg ctcaagtttt accgccaggt
    10861 tgtgcggatg agcattggtg agcaaaattc gctgcttacc gctggctttc agtgcctcaa
    10921 gaaacggaat ggtatcttca cgcagtacgg cgcgcggtcc catctcggtg gtcattgcac
    10981 agatatccag acccagttgc tcactccagt aatcaagaca gtaccagttt agcgtatgct
    11041 gtacgtcgtg atattgctgg cgcatatatt ccatcgcttc ctgtggcgta accccgtttt
    11101 tcgcgcccca tgtttcaggc accagctttt gccagaaata gttatcgaag gcgaggtcga
    11161 gcaacgtgcc gtccatatcc agcagaacgg tatctacgtc ctgccaggca atgttgatat
    11221 gcatgaggga aatctccaga gtgaagcaat ttgcgcgaca gggtagcata acctgtcgcg
    11281 caaacgtgtt attcgataag gctttctgaa ggggtgatca gttgcgggtt caggcagctt
    11341 tcataatagg cctgaatctc catcatgcga gtgcgatgac gctggtaacg acgccaggcc
    11401 tgtacgccat tgtaaatggc gctacccagc atcgtcagta gcagcaatgt ggtgctgaga
    11461 tagcgccaca ggccggaacg atccgggatc ggatgaaggc caatatgctg cgtaccattg
    11521 gcgtcagtga agatttttgt gacgatacct tcggcgttaa acggcgtatg catcagcatt
    11581 tgtgccagtt tctggaaagc gttccactgt tcttgcggcg ggtagtcgta aagtgatgcc
    11641 gaaggccagg gctgatcaac aaaatcgctg ccttcgtcgc tgacaatcag gaatccgccg
    11701 ggggccggac tgtttagtga ttgtgccgct cgcgccgttt catgcgtgat aaacggcgcg
    11761 gtggaggttg ccaccaggtt atccagcgat tccgcactca ccgggcgtaa taacacattc
    11821 acgccatcga gcttcccggc gttggcgcgt tttaccagcg cgtcccagtc tttactgttg
    11881 ccgagattga ccagcgcatt tttcagtcgc acacagtcat ctttggcaga acataaatcc
    11941 gctgtcttca gtacaatgtc gccaaaatca tcaagcaata ccatgccgga tttttgaatc
    12001 gctgaacgta atgaggcact gacgcgagat tcatcttccg gtttagggtg cagctggcga
    12061 ttaactgctt cagtcaatgc cgtcgctttg ttgaccagtt cagattctgg taatggtaat
    12121 gagcgggcgt cattccagat gatctgcgag cagtcaaacg gtaaaaaagg tgaattggtt
    12181 ttcgcgctcc aggttccgga agtgcgaata ttacacattc ccgtaccgct aatacgcaat
    12241 gtatcgccta cccgcacgcc agcgtcagcc agttgtttta cgctggtggc ttcaatggtc
    12301 tgcgcgcctt tcatccatga gagagtgaat ttcagcggca tatccagcgg gatccagaat
    12361 aacagcataa acagcaccag cagcgagccc gcagcgataa tcgtactgcg cagccagtgc
    12421 tgtaacggaa agttttttac ttcatcatgc agcgaaagat atcgcccctg acgcactacg
    12481 tggcagtcga gatagatatc aatatcggtt tgttgatcga gatcctgagc aatgtatggc
    12541 tgccagtgtg cgggatagac caggtcgata ataccgagtg aaatattgtt gatctgttcc
    12601 tgatcgtttt cgccaaacaa tccccaacga cggggtgtac cgcgcagaca atgaatttcc
    12661 cgcagggagg attttgccgg gggcgcgaat agcccccaca gacctgcgcc cagcagcagt
    12721 aatgcgccgc ctgccagcca cggaacaaat acatccgggg taatcaggca gaaaaagaac
    12781 atcaggaagg aggcgacgat cagcaacgct tcacgcagcc cgcgcggacg actcagcgca
    12841 tattcttcat gcgtttcttt gcgaatattg agtagctcga tttgctcact ctcttccccg
    12901 cgaatcgacg cctgcgtgga cggaacaggt tgcaaggcat agccgcgcgt ttcctgcatg
    12961 tactcctgta gcgtatgacc gttgagtgaa ataaccaacg gcagcgaatc ggtatgaatc
    13021 agttcaacgg tattctcatc gttgatgtac tgttcccaga aggggggcag gtggacttct
    13081 accgaatcga ggtagtaacg ccatttattc ggatcgtcgg tagagatgcc gtaacgtgtg
    13141 atagcgtgtg tcagcatcat gacgttgttg ctttcggcat tcagcgccag agagatcggt
    13201 gccgcgctag ctcccgttgg gccaggcacc tgtaatacct gcgtcaggct ctcaagataa
    13261 ttttcaacgg cgctacgttc ttcaggtgtg agtttacgcg tttgcgcatc cgcgaaggcg
    13321 ttggtccagg gcagctgact ccgtctggat cgcactttta tcagccatcc cgcaagtagt
    13381 gagcaggcca gcaaagcagc taaaaaaatc acaatggtgc tcatgctttc cccatcttac
    13441 ttagtctgtc aggcgtggtc agtcgcacca gacacaatac atgattctgc ggttggctat
    13501 cggcaagcgt ggagtttaac ttgagcatca ttaagcacat cacagtaacc gctgatcata
    13561 gcaaaccctc tgaaggcgga atatcagcaa attcctagag ttatttcaac ctattgactt
    13621 ttaatttgat ttgaggacga ttatttatta agttacataa atgtaaataa catgcaattc
    13681 acattgccga aagcgtgtcc gatatcgcac aataaccgct gatttcacag catagatccc
    13741 acgatgagca aatcattaca aaaacccacc attctgaatg ttgaaactgt agcccgttcc
    13801 cgactgttta ccgtcgagag cgtggatctg gagttcagca atggcgtgcg gcgtgtttat
    13861 gaacgaatgc gtccaaccaa ccgggaagca gtgatgattg tgccgattgt ggacgatcac
    13921 ctgatcctga tccgcgaata cgcagtggga acagaatcct acgaattagg tttttcgaaa
    13981 ggattaattg atccgggtga aagcgtctac gaagccgcta accgcgagct aaaagaagag
    14041 gttggatttg gtgcgaacga tctgactttt ttgaagaagc tcagcatggc accgtcttac
    14101 ttttccagca aaatgaatat cgtggtcgcg caagatctct acccggaatc gctggaaggc
    14161 gatgagccag agccgctacc acaggtgcgc tggccgctgg cgcatatgat ggatttgctg
    14221 gaagaccctg acttcaacga agcgcgtaat gtcagcgcgc tgttcctcgt gcgcgaatgg
    14281 ttgaaagggc aggggcgagt gtaaatgcgt gaagtttgcc tgatgcacaa cgcttatcag
    14341 gcttatgggg ttcctgcaat atattgattt ttcacgattt tgttagccgg gtaacgcggt
    14401 cacccgcatc cagcataaac aaatgcactt tgtcagccaa ctgaaaaggc gccgaagcgc
    14461 ctttttaatc agaacaattc ctgtgcctca ccattatcga taatggtcgt tcccacctcg
    14521 tgcaccgcct gttgtgtcgg ctgcgtacct tcgatgaaat actcttcgcg gctgttgcca
    14581 ccattagcta actgcccggt gctgcgatcg atattcaccg tcacaatacc cggtggcggc
    14641 gtcagcggct gctccggcac accttcaaga acggctttca tataagcgtc ccatgcaggc
    14701 tgggcactct tggctccgcc ttcgtaacct gagatctgat ctttaatcgc tccggaagcc
    14761 gttgtatgac cgagattacg acggtgatca tcaaagccaa tccagaccga ggtcacaacg
    14821 cccggaccgt aacccgagaa ccacgcatct ttcgaactgt tagtggtacc ggttttcccg
    14881 ccgatatcgc gacgctgcaa atcacgacct gcacgccagc cagtaccctg ccagcctggc
    14941 tcaccaaaga tattggtgtt caaagcactc ttaatcagga atgccagcgg agtgttgatg
    15001 acgtgcggtg cgtactcctg cgcgccagtc ttcgccacta acgcctgatt tgcctgctcc
    15061 agctgcggca ttggtacaga aacattctgc tgctcgcggg agatagcgac atcttcaaca
    15121 tcgttatttt ccagcacgtt cgatttctgc gtatcaccgt aaatcaccgg aatatcgcat
    15181 tccgggcagg ctactttcgg tttcgcttcg aaaatcacgc cgccctgatc gttttcaatt
    15241 ttgctgataa accacgggtc caccaggaag ccgccgttcg ccatgaccgc gtagccgcgc
    15301 gccacctgca ttggggtgaa ggacgctgaa cccagcgcca gcgattcggt gtggacaatg
    15361 ttttgcgccg ggaagccgaa gcgttgcaga tattctgcag cgtagtcgac gcccatagcc
    15421 cgcattgcac gtaccatcac cacgtttttc gactgaccca gcccctgacg taagcgaatt
    15481 ggaccagcat attgtggcgg cgagtttttc ggctgccagt cagaaccggc acctgcgtcc
    15541 cagcgagaaa ttggcacatc gttcaacata cttgccagcg tcagaccttt atccatcgcc
    15601 gcggtgtaga ggaacggttt gatgttggaa cccacctgac gcagtgcctg ggtggcgcgg
    15661 ttaaacttgc tctgattgaa atcaaagcca ccgaccagcg ccataacggc accgttttgc
    15721 ggattgatcg acaccagcgc cgagttcact tccggcactt gtgccagcca ccatgcatcg
    15781 ccaacctgac gaacccagat ttgctgaccc gtttgcagaa catcggtcac tttacgcggc
    15841 gtcggtccct gctgagtatc cgaacggtaa ggacgcgccc agcgaacgcc ttccatactc
    15901 aatgcgacgg tcgacccgtc cgccagcatc gccgtcgctc cctgaggatt ggcgctggtg
    15961 actgcggcag gcagcagcgg accataggtc ggcagcgcct tcagcgtatc ggtaatcttg
    16021 ttgttatccc acgccgactc gcccactttc cacagcacat ttgccgggcc gcgatagccg
    16081 tggcgcatgt cgtagtccag cacgttatta cgtaccgcct gctgtgcggc ctgctgcact
    16141 ttgcgggtga tggtggtgta aatgcgataa ccgtcttcat aggcactttc gccataacgg
    16201 ttatacatct cctggcgcac catttcgctc aggtacggcg cagagaaagc aatctccggc
    16261 gcgtgatagt tagcgttaat cgcctcagtg cgtgtctgat cgaactgttg ttgggtgata
    16321 tacccttcat ccagcatccg cgacagtacg acgttacgcc gcgcgacggc acgatccatt
    16381 gagtagagcg gattaaaggt ggaaggcgct ttcggcagcc cggctatcac agccatttcg
    16441 ttcagcgtca gttggtcgac cgttttaccg aaatagactt gtgccgcagc accgacacca
    16501 taggcgcggt aaccgaggta aatcttattc agataaagct cgaggatctc gtctttcgtc
    16561 agcaactgtt caatgcgaat cgcgaggaag acttccttaa tcttacgcat cagcgtgcgt
    16621 tctggactga ggaagaagtt tctcgccagc tgctgggtaa tggtactcgc cccttgtgac
    16681 gcgtggccgg agaacagcgc cacacttgcc gcacggaaga tccccaccgg gtcaacgccg
    16741 tgatgctcgt agaagcggct gtcttccgtc gcgataaagg ctttcaccat ctccggcggg
    16801 atttgatcca acgtaaccgg aatacgacgt ttctcaccgt attgagcaat cagctcgcca
    16861 tcggcgctgt aaatctgcat cggaatttgc aggcgaacat cttttaatgt cgccacatcc
    16921 ggcagttgtg gctcgatgta gcggtatagg ccataaatcg agcctgctcc cagcagaatg
    16981 caacagactg caaggatcaa aaaatacttt acgaacttca ctggaaattt cccatttagt
    17041 ttcatttggg cagtttataa acaaacgcgc ggtagtataa aggcaagcca gacgcattga
    17101 tatacccgtc agagtgacgg gtgataagga gatcatcaca atggcattta agatctggca
    17161 aattggtttg catttacaac agcaagaagc ggtagcggtt gcgatcgtgc ggggcgcaaa
    17221 agaatgcttt ttgcaacgct ggtggcggtt gccgctggag aacgacatta tcaaagatgg
    17281 gcggattgtt gatgcgcagc agctggctaa aacgttgtta ccttggagtc gcgaactgcc
    17341 gcagcgtcat cacattatgt tggcgtttcc cgccagtcgc acattacagc ggtcatttcc
    17401 gcgcccgtcg atgtcccttg gtgagcggga gcaaacggcc tggctgtcag ggacgatggc
    17461 ccgcgagctg gatatggatc cggactccct gcgcttcgat tacagcgaag actcactcag
    17521 tcccgcctat aacgtgactg ccgcgcaaag caaagagctg gcaacgctgc ttactctggc
    17581 agaaaggttg cgtgttcatg ttagtgcgat caccccggat gccagtgcat tacagcgatt
    17641 cctgcctttt ttaccttctc atcagcaatg tctggcctgg cgtgataacg aacagtggct
    17701 gtgggcgacg cgctatagct gggggcgcaa actggcggtg gggatgacta gcgcgaagga
    17761 gctggcggca gcgttattcg ttgatcccga cagcgtcgcg atatgtggcg aaggcggatt
    17821 tgacccctgg gaggccgttt ctgttcgtca gccgctgcta ccgccgcctg gtggagactt
    17881 tgccatcgcg ctggggctgg cgcttgggaa ggcgtactga tgaacccgcc aattaatttt
    17941 ttgccctggc gacagcaacg ccggaccgct tttctgcgtt tctggttgct gatgttcgtt
    18001 gcgcctctgc tgctggccgt cgggataacg ctaatactgc gtctgacagg cagcgccgaa
    18061 gcgcgcatag acgcagtttt gcttcaggcg gaacaacaac tcgcccgcag cttacagata
    18121 acgaagccac gtttgctgga gcaacagcag ttacgcaaac agcgttcgca acggcagcgc
    18181 cagcgacaat ttacccgcga ctggcaatct gcgctggaag cactggcggc gcttttaccc
    18241 gagcacgcct ggctgacaac gataagctgg cagcagggaa cgctggagat caaggggctg
    18301 acaacaagca ttaccgcgtt aaacgcacta gaaacgtcac tccgccagga tgcgtctttt
    18361 catctcaatc agcggggagc cacgcagcag gatgcgcagg gacgctggca atttgagtat
    18421 cagttaacaa ggaaggttag cgatgaacat gttctttgac tggtggttcg ccacatcacc
    18481 ccgcctccgc cagttttgct gggcattctg gttgctgatg ttagttacgc tcatttttct
    18541 gtcatcgaca caccatgaag agcgcgacgc attaattcga ttacgggcaa gtcatcacca
    18601 gcagtgggcc acactgtatc gcctggttga caccactccc ttcagcgaag aaaaaacgct
    18661 gcccttttcg ccactggatt ttcagttgcc cggcgcgcaa ctggtttcct ggcatccatc
    18721 cgcgcaggga ggtgagttgg cgttgaaaac gctgtgggaa gcagtgccgt cggcattcac
    18781 acggctggca gagcgcaacg tcagcgtgag ccgtttttcg ttaagcgtgg aaggtgatga
    18841 tcttttgttc acgctacaac tggagacgcc gcatgagggt taaacgctgg ttgttggcag
    18901 gtattgcatt gtgcctttta accggtatgc gtgacccttt taaaccgccg gaagatctat
    18961 gccggattag cgaacttagc cagtggcgct atcaggggat ggtagggcga ggcgagcgca
    19021 tcatcggtgt aataaaagac gggcaaaaga aatggcgacg ggtgcagcaa aacgatgtgc
    19081 tggaaaacgg ctggacaatt ttacagctga cgccagacgt actaacgctg ggtaccggga
    19141 caaactgcga accgccacaa tggttgtggc aacggcaagg agatacaaat gaagcaatgg
    19201 atagccgcac tactgttgat gctgataccc ggcgtacagg cggcaaagcc gcaaaaagtg
    19261 acgctgatgg tggatgacgt tccggtagct caggtgttgc aggcgctggc tgaacaggag
    19321 aagttgaacc tggtcgtgtc gccagacgtc agcggtacgg tgtcgttaca tctaacagat
    19381 gttccctgga agcaggcact acaaactgta gtgaaaagcg ccggactgat aacgcggcag
    19441 gaaggcaaca ttctctcagt gcattccatt gcctggcaga ataacaatat cgcccgccag
    19501 gaggcggagc aggcgcgggc gcaggcaaat ctgccgctgg aaaatcgcag tataaccctg
    19561 caatacgccg acgcgggaga actggcgaaa gcgggggaga agctactgag tgccaaaggg
    19621 agtatgaccg tcgataaacg caccaatcgc cttttgctac gagataacaa aacggcgtta
    19681 agcgcgcttg aacagtgggt agcgcaaatg gatctgccgg tcgggcaggt tgagctgtcg
    19741 gcgcatattg tcaccattaa tgaaaaaagt ttgcgtgagt taggcgtgaa atggacgctg
    19801 gccgatgcgc aacacgctgg tggcgttggg caagtcacca cgcttggtag cgacctctcc
    19861 gtagcgacgg cgacaacgca tgtcggtttt aacattgggc gcatcaacgg acgcttgctg
    19921 gatcttgagc tttccgcgct cgaacaaaaa cagcagctgg atattatcgc cagtccgcgt
    19981 ctgctggcct cacatcttca gcctgccagc attaaacagg ggagcgaaat tccatatcag
    20041 gtttccagcg gggaaagtgg cgcgacgtcg gtggaattta aagaggccgt cctggggata
    20101 gaggtcacgc ccacggtgtt acaaaaaggt cgcatccggc tgaaattaca catcagccag
    20161 aacgttccgg ggcaggtgct acagcaggcc gatggcgaag tgctggcgat tgataagcag
    20221 gagatcgaaa cgcaggtcga ggtcaaaagc ggagaaacgt tggcgctggg cggcattttt
    20281 acccgtaaaa ataaatcggg tcaggatagc gtaccgttgc ttggcgacat tccctggttc
    20341 gggcaattat ttcgtcatga cggaaaagaa tatgaacgac gcgagttagt ggtgtttatc
    20401 acgccacgac tggtttccag tgagtaaaca gccgtaaaag cggtaatgtt tttatgctga
    20461 acgtgtttca tctatttgac gcgcgcaggt atttagcata caaggagtac cgatttgaga
    20521 gttggcgctc ttcgctgcct gcgttccatg atgatgattt atcattcagg cggcattttg
    20581 ctgtcttttt tacgctaatc ttacccggtg atttatcgcc agagcggtgg tagcaaggca
    20641 gcgcgcttgc agcgaccaga tatgcagagg gatgggtgat ttattcagtt gccaaacccg
    20701 ctggagtatt gagataattt tcagtctgac tctcgcaata tcttatgagg tttcagttca
    20761 tgtcctgcgg cgctctctga gcgaagcggg tttatcatta acgaatagtc ttagtagtac
    20821 cgaaaaaatg gcagagaaac gcaatatctt tctggttggg cctatgggtg ccggaaaaag
    20881 cactattggg cgccagttag ctcaacaact caatatggaa ttttacgatt ccgatcaaga
    20941 gattgagaaa cgaaccggag ctgatgtggg ctgggttttc gatttagaag gcgaagaagg
    21001 cttccgcgat cgcgaagaaa aggtcatcaa tgagttgacc gagaaacagg gtattgtgct
    21061 ggctactggc ggcggctctg tgaaatcccg tgaaacgcgt aaccgtcttt ccgctcgtgg
    21121 cgttgtcgtt tatcttgaaa cgaccatcga aaagcaactt gcacgcacgc agcgtgataa
    21181 aaaacgcccg ttgctgcacg ttgaaacacc gccgcgtgaa gttctggaag cgttggccaa
    21241 tgaacgcaat ccgctgtatg aagagattgc cgacgtgacc attcgtactg atgatcaaag
    21301 cgctaaagtg gttgcaaacc agattattca catgctggaa agcaactaat tctggcttta
    21361 tatacactcg tctgcgggta cagtaattaa ggtggatgtc gcgttatgga gaggattgtc
    21421 gttactctcg gggaacgtag ttacccaatt accatcgcat ctggtttgtt taatgaacca
    21481 gcttcattct taccgctgaa atcgggcgag caggtcatgt tggtcaccaa cgaaaccctg
    21541 gctcctctgt atctcgataa ggtccgcggc gtacttgaac aggcgggtgt taacgtcgat
    21601 agcgttatcc tccctgacgg cgagcagtat aaaagcctgg ctgtactcga taccgtcttt
    21661 acggcgttgt tacaaaagcc gcatggtcgc gatactacgc tggtggcgct tggcggcggc
    21721 gtagtgggcg atctgaccgg cttcgcggcg gcgagttatc agcgcggtgt tcgtttcatt
    21781 caagtcccga cgacgttact gtcgcaggtc gattcctccg ttggcggcaa aactgcggtc
    21841 aaccatcccc tcggtaaaaa catgattggc gcgttctacc agcctgcttc agtggtggtg
    21901 gatctcgact gtctgaaaac gcttcccccg cgtgagttag cgtcggggct ggcagaagtc
    21961 atcaaatacg gcattattct tgacggtgcg ttttttaact ggctggaaga gaatctggat
    22021 gcgttgttgc gtctggacgg tccggcaatg gcgtactgta ttcgccgttg ttgtgaactg
    22081 aaggcagaag ttgtcgccgc cgacgagcgc gaaaccgggt tacgtgcttt actgaatctg
    22141 ggacacacct ttggtcatgc cattgaagct gaaatggggt atggcaattg gttacatggt
    22201 gaagcggtcg ctgcgggtat ggtgatggcg gcgcggacgt cggaacgtct cgggcagttt
    22261 agttctgccg aaacgcagcg tattataacc ctgctcaagc gggctgggtt accggtcaat
    22321 gggccgcgcg aaatgtccgc gcaggcgtat ttaccgcata tgctgcgtga caagaaagtc
    22381 cttgcgggag agatacgctt aattcttccg ttggcaattg gtaagagtga agttcgcagc
    22441 ggcgtttcgc acgagcttgt tcttaacgcc attgccgatt gtcaatcagc gtaacaacaa
    22501 gaaaggtcag gccgcttatc aagcggtcta ttagcttcag gttaattgca acgtggtaag
    22561 cattaacctt ttagtggggt gttaaatgga tgaattcaaa ccagaagacg agctgaaacc
    22621 cgatcccagc gatcgtcgta ctggtcgttc tcgtcaatct tctgaacgtt ctgagcgtac
    22681 tgaacgtggc gaaccgcaga tcaattttga tgatattgaa cttgatgaca ctgacgatcg
    22741 ccgtccgact cgtgcgcaaa aagagcgcaa tgaggaaccg gaaatcgaag aagaaattga
    22801 cgaatccgaa gatgaaaccg tggatgaaga gcgcgtagag cgtcgtccgc gtaagcgcaa
    22861 aaaagcagcc agtaaacccg cttctcgtca gtatatgatg atgggcgtcg gcattctggt
    22921 tctactgctg ttgatcatcg gtatcggttc tgcgctaaaa gccccctcga cctcttccag
    22981 cgatcaaacc gcgtctggcg ataagagtat tgatcttgca ggcaatgcga ccgatcaggc
    23041 gaatggggtg cagccagcgc cgggaaccac gtctgcggaa aatactcagc aggatgtttc
    23101 tctgccaccg atctcttcta cgccgactca agggcaaacc ccggcggcaa cggatggtca
    23161 acaacgtgtt gaagtgcagg gtgacctgaa caatgcgctg actcagccac aaaatcagca
    23221 acagttgaac aatgtggcgg tcaattccac attgccgacc gaacccgcga ctgtcgcgcc
    23281 tgttcgcaat ggcaatgcat cgcgtgacac ggcgaaaacg caaaccgctg aacgtccgtc
    23341 cactacgcgc ccagctcgtc agcaggcggt gattgaaccg aaaaaaccgc aagcaaccgt
    23401 gaaaacggag ccgaagccgg tagcacagac gccgaagcgt actgaaccag ctgcccctgt
    23461 ggcgagcacg aaggcaccgg ctgcgacttc tacgccagca ccaaaagaga cggcgactac
    23521 ggctccagta cagacggcat ccccggcgca aaccacggca acaccagccg ctggagggaa
    23581 gaccgcaggt aatgttggtt cgttgaaatc ggcaccgtcc agccattaca ctctgcagct
    23641 gagcagttcc tctaactacg acaacctgaa cggttgggcg aagaaagaga atctgaaaaa
    23701 ctacgttgtc tatgaaacga cgcgtaatgg tcagccgtgg tatgtcctgg tttctggcgt
    23761 gtacgcttcg aaagaagagg cgaaaaaagc ggtatctaca ttgccagcag atgttcaggc
    23821 caaaaacccg tgggcgaaac cgctgcgtca ggtacaggcc gatctgaagt aatcaaggtt
    23881 atctcccgca atggtttatc gttgcgggag ctgcctgaag cgctggatgc tgtcggagct
    23941 ttctccacag ccggagaagg tgtaattagt tagtcagcat gaagaaaaat cgcgcttttt
    24001 tgaagtgggc agggggcaag tatcccctgc ttgatgatat taaacggcat ttgcccaagg
    24061 gcgaatgtct ggttgagcct tttgtaggtg ccgggtcggt gtttctcaac accgactttt
    24121 ctcgttatat ccttgccgat atcaatagcg acctgatcag tctctataac attgtgaaga
    24181 tgcgtactga tgagtacgta caggccgcac gcgagctgtt tgttcccgaa acaaattgcg
    24241 ccgaggttta ctatcagttc cgcgaagagt tcaacaaaag ccaggatccg ttccgtcggg
    24301 cggtactgtt tttatatttg aaccgctacg gttacaacgg cctgtgtcgt tacaatctgc
    24361 gcggtgagtt taacgtgccg tttggccgct acaaaaaacc ctatttcccg gaagcagagt
    24421 tgtatcactt cgctgaaaaa gcgcagaatg cctttttcta ttgtgagtct tacgccgata
    24481 gcatggcgcg cgcagatgat gcatccgtcg tctattgcga tccgccttat gcaccgctgt
    24541 ctgcgaccgc caactttacg gcgtatcaca caaacagttt tacgcttgaa caacaagcgc
    24601 atctggcgga gatcgccgaa ggtctggttg agcgccatat tccagtgctg atctccaatc
    24661 acgatacgat gttaacgcgt gagtggtatc agcgcgcaaa attgcatgtc gtcaaagttc
    24721 gacgcagtat aagcagcaac ggcggcacac gtaaaaaggt ggacgaactg ctggctttgt
    24781 acaaaccagg agtcgtttca cccgcgaaaa aataattctc aaggagaagc ggatgaaaca
    24841 gtatttgatt gccccctcaa ttctgtcggc tgattttgcc cgcctgggtg aagataccgc
    24901 aaaagccctg gcagctggcg ctgatgtcgt gcattttgac gtcatggata accactatgt
    24961 tcccaatctg acgattgggc caatggtgct gaaatccttg cgtaactatg gcattaccgc
    25021 ccctatcgat gtacatctga tggtgaaacc cgtcgatcgc attgtgcctg atttcgctgc
    25081 cgctggtgcc agcatcatta cctttcatcc agaagcctcc gagcatgttg accgcacgct
    25141 gcaactgatt aaagaaaatg gctgtaaagc gggtctggta tttaacccgg cgacacctct
    25201 gagctatctg gattacgtga tggataagct ggatgtgatc ctgctgatgt ctgttaaccc
    25261 aggttttggc ggtcagtcgt tcattccaca aacactggat aaactgcgcg aagtacgtcg
    25321 tcgtatcgac gagtctggtt ttgacattcg actggaagtg gacggtggcg tgaaggtgaa
    25381 caacattggc gaaatcgctg cggcgggcgc ggatatgttc gtcgccggtt cggcaatctt
    25441 cgaccagcca gactacaaaa aagtcattga tgaaatgcgc agtgaactgg caaaggtaag
    25501 tcatgaataa gtttgaagat attcgcggcg tcgcttttga tctcgacggt acgctggttg
    25561 acagtgctcc cggtcttgct gctgcggtag atatggcgct gtatgcgctg gagttacccg
    25621 tcgcaggtga agaacgcgtt attacctgga ttggtaacgg cgcagatgtt ctgatggagc
    25681 gtgcattggc ctgggcgcgt caggaacgtg cgactctgcg taaaacaatg ggtaaaccgc
    25741 ccgttgatga cgacattccg gcagaagaac aggtacgtat tctgcgtaaa ctgttcgatc
    25801 gctactatag cgaggttgcc gaagagggga cgtttttgtt cccgcacgtt gccgatacgt
    25861 tgggcgcgtt gcaggctaaa ggcctgccgc taggcctggt caccaacaaa ccgacgccgt
    25921 tcgtcgcgcc actgctcgaa gccttagata ttgccaaata ctttagcgtg gttatcggcg
    25981 gcgatgatgt gcaaaacaaa aaaccgcatc cggacccgct gttactggtg gctgagcgga
    26041 tgggaattgc cccacaacag atgctgtttg tcggcgactc acgcaatgat attcaggcgg
    26101 caaaagcggc aggttgccca tcagttggct taacctacgg atataactac ggcgaggcta
    26161 tcgatctcag ccagcctgat gtaatttatc agtctataaa tgaccttctg cccgcattag
    26221 ggcttccgca tagcgaaaat caggaatcga aaaatgacta agcccatcgt ttttagtggc
    26281 gcacagccct caggtgaatt gaccattggt aactacatgg gtgcgctgcg tcagtgggta
    26341 aacatgcagg atgactacca ttgcatttac tgtatcgttg accaacacgc gatcaccgtg
    26401 cgccaggatg cacagaagct gcgtaaagcg acgctggata cgctggcctt gtatctggct
    26461 tgtggtatcg atcctgagaa aagcaccatt tttgttcagt cccacgtacc agaacatgcg
    26521 cagttaggct gggcactgaa ctgctatacc tacttcggcg aactgagccg catgacccag
    26581 tttaaagata aatctgcgcg ttatgccgag aacatcaacg ctggtctgtt tgactatccg
    26641 gtgctgatgg ctgcggacat cctgctgtat caaactaatc tggtaccggt gggtgaagac
    26701 cagaaacagc acctggaact gagtcgcgat atcgcccagc gtttcaacgc gctgtatggc
    26761 gagatcttta aggtgccgga gccgtttatt ccgaaatctg gcgcgcgcgt aatgtcgctg
    26821 ctggagccga ccaagaagat gtccaagtct gacgataacc gcaataacgt tatcggcctg
    26881 ctggaagatc cgaaatcggt agtgaagaaa atcaaacgcg cggtcactga ctccgacgag
    26941 ccgccggtag ttcgctacga tgtgcagaac aaagcgggcg tttccaacct gctggatatc
    27001 ctttctgcgg taacgggcca gagcatccca gaactggaaa aacagttcga aggcaagatg
    27061 tatggccatc tgaaaggtga agtggctgat gccgtttccg gtatgctgac tgaattgcag
    27121 gaacgctatc accgtttccg caacgatgaa gccttcctgc aacaggtgat gaaagacggc
    27181 gcagaaaaag ccagtgtaca cgcttcccgt acgctgaaag cggtgtacga agcgattggt
    27241 tttgtggcga agccgtaata tcaaaacgct cggacggtcc cctcgcccct ttggggagag
    27301 ggttagggtg aggggagcag gcaagcgcca gtgggaatta ccctttgctc gcattgtcga
    27361 ataaatcact tcgtcatcac tctgaaaccg gggaaacccg gtttttttat cctcatttgc
    27421 aataatccga aaaaatgtga agcgcctcgc cgtttccaca tctcacagtt gccacttatc
    27481 ttcattttaa tgaagatata aacattcatt ttattgaaaa tatattatgc gtcgaacgtt
    27541 tatcaaaaaa gaaggcgtcg tcatcacgac gctggcccgt tatttgttgg gtgaaaaatg
    27601 cggtaatcga ctgaaaacca tagatgagct ggcaactgaa tgccgttcat cggttggcct
    27661 gacgcaggcc gcgttgaaaa cgttggaatc aagtggagcg atacggattg aacgccgtgg
    27721 gcgcaatggc agttatctgg tcgaaatgga taacaaagcg ctgctgagtc atgtggatat
    27781 caataacgtt gtgtgtgcca tgcctttgcc ctatacccgc ttgtacgaag gtttagcaag
    27841 cgggctgaaa gcccagtttg atggcattcc tttttattat gcgcatatgc gtggcgcgga
    27901 tattcgtgtg gagtgtttgc ttaacggtgt ctatgacatg gcagtagttt cccgcctggc
    27961 ggcggaaagt tatctcagcc aaaacaattt gtgcatcgcc ctcgagcttg gcccgcatac
    28021 gtatgttggt gaacatcaac tgatatgccg caaaggtgag tctggaaatg ttaagcgagt
    28081 aggtctcgat agtcgttcgg cggatcagaa aatcatgacc gatgtctttt ttggcgatag
    28141 tgatgtggaa cgtgtcgatc tctcttatca cgagagttta caacgcattg ttaaaggcga
    28201 tgtcgatgcg gttatctgga acgtggtggc ggaaaacgaa ctgaccatgc tgggattaga
    28261 ggcgacgccg ctcacagacg atccgcgatt tttacaggcc accgaagccg tggtcctgac
    28321 gcgagtcgat gattacccaa tgcaacaact gctgcgtgcc gttgtagata aacacgccct
    28381 gctcgcccat caacaacggg tagtgagtgg ggaacaggaa ccgagttatt aaacgaaagg
    28441 catctgatat ggaaaccaga ctcaacctgc tttgcgaggc aggcgttatt gataaggaca
    28501 tctgcaaagg catgatgcag gtcgtcaacg tactggaaac agagtgccat ctgccggtgc
    28561 gcagtgagca aggaacgatg gcgatgacac atatggcgag tgcactgatg cgcagtcgcc
    28621 gtggtgaaga aatagagccg ctggataacg aattgctggc agagctggcg caatccagcc
    28681 actggcaagc cgttgtgcaa ttgcatcagg tgttgttgaa ggaattcgca ctggaagtta
    28741 atccgtgtga agaaggctat ttgctggcca acctttatgg attatggatg gctgctaacg
    28801 aagaggtttg aagctcccga caaatccacg tcgcacaacc taaatattca aaaaaatgaa
    28861 tatttaattc aaggaacaga aacgaggcaa caagatgttt gtagaagcat tgaaacgcca
    28921 gaacccggcg ctgatttccg ccgcactaag tttgtggcag cagggcaaga tcgccccgga
    28981 cagctgggtg atcgacgtgg atcaggtact ggaaaacggt aagcgactga ttgagacggc
    29041 gcggctttac ggcattgaac tgtatctgat gaccaagcag tttggccgta acccatggct
    29101 ggcggaaaaa ttgctggcat taggttacag cggcattgtg gcggtggatt acaaagaggc
    29161 gcgagtcatg cgccgcgctg gtttgtcggt ggcgcatcag gggcatctgg tacaaatccc
    29221 ttgtcatcag gttgctgacg ccgttgaaca gggcaccgac gtcatcaccg tgtttactct
    29281 cgacaaagcg cgggaagttt ctgcggcagc ggtgaaggcc ggacgtgtgc agtttgtgct
    29341 gctcaaagtt tatagcgacg atgattttct ttatccgggg caggagagcg gttttgtaca
    29401 gcattcgctg cacgaggtgg ttgctgaaat taagaaactg ccgggtctgc atttagccgg
    29461 acttacccat ttcccttgcc tgctttggga tgaggctgcc ggaaaagttt tgccgacacc
    29521 gaatcttcac acgctgatac aggcacggga tcaactggcg aaatctggta ttgcacttga
    29581 gcaactgaac gcgccttcag cgaccagctg cacttcgctg ccattactgg cgcaatacgg
    29641 tgtgactcat gccgaacccg gtcatgcgct gacgggcact attccggcaa accagcaggg
    29701 cgatcagtct gaacgtatcg cgatgctctg gttgagtgaa atctcccatc atttccgtgg
    29761 cgacagctac tgctacggcg gcggttacta ccgtcgtggt catgcgcaac atgcgttggt
    29821 gtttacgcca gaaaatcaaa agattactga aaccaatctc aaaactgtgg atgacagcag
    29881 tatcgactac accctgtcgc tggcaggcga gtttccggta agcagtgcag tggtgctctg
    29941 tttccgcacg cagatttttg tcacccgtag cgatgtggtg ctggtgtccg gtattcaccg
    30001 tggcgaaccg aaaatcgttg gtcgttatga cagtcttgga aactctctgg gggcgtaatg
    30061 gcgcgatttg tggtgttagt gattgatagc tttggcgtag gggcaatgaa agatgtcacg
    30121 ctggtgcgtc cgcaagatgc gggagcgaat acatgtggtc acatcctgag ccagttgccg
    30181 catttgcagc taccaacgct ggagaagctg gggctaatca acgcattggg ttatgcgcca
    30241 ggcgatatgc agccgtcaga ttccgcaacc tggggcgtgg cagagctgca acatgaaggt
    30301 ggcgatacct ttatggggca tcaggaaatt ttaggcacgc gcccgttacc gccgctgcgg
    30361 atgccttttt gcgatgtgat tgaccgtgtt gagcaggcat tagtatccgc cggttggcag
    30421 gtggagcgcc gtggcgatga actgcaattt ctgtgggtca atcaggcggt tgcgattggc
    30481 gataatctcg aggcggattt aggccaagtc tataacatta ccgccaatct ctctgtgatc
    30541 tcttttgacg acgcaatcaa aattggtcgt atcgtgcgtg agcaggtaca ggtcggtcgg
    30601 gtcattacat ttggtggcct gttaaccgac agtcaacgca ttctcgatgc cgcagaaagc
    30661 aaagaagggc gctttattgg tatcaatgcg ccgcgttctg gcgcttatga caacggcttc
    30721 caggtcgtgc atatgggcta cggtgtcgat aaaaaagtgc aggtgccgca aaaactgtat
    30781 gaggcgggcg tgccaaccgt gctggtgggt aaggtggcag atatcgtcag caatccttat
    30841 ggcgtgagct ggcaaaacct ggtggatagc cagcggatta tggatatcac cctcgacgaa
    30901 tttaacaccc atccgacggc gtttatttgc accaatatcc aggaaaccga cctcgctggt
    30961 catgcagaag acgtcgcacg ttatgccgaa cgtttgcagg tcgttgaccg taaccttgcc
    31021 cggcttgttg atgcgatgca gccagatgat tgcctggtcg tgatggcgga tcacggcaac
    31081 gatccgacca ttggtcacag ccaccatacc cgcgaagtgg tgccgctgct ggtttatcag
    31141 caaggcctgg ctgctacgca gctcggtgtg cgcaccacgc tttctgatgt gggagctacc
    31201 gtgtgtgaat ttttccgtgc gccaccgcca caaaatggtc gctcttttct ttcctccctc
    31261 cggtttgcag gagacaccct atgagttttg atccgacggg ttacaccctg gcccatgagc
    31321 atctgcatat tgatctctcc ggctttaaaa acaacgtgga ctgccgcctt gatcagtatg
    31381 cgttcatttg ccaggagatg aacgacctga tgacccgggg tgtacgtaat gtgattgaga
    31441 tgaccaaccg ttacatgggg cgcaatgcgc aatttatgct cggtgtaatg cgcgaaaccg
    31501 ggatcaacgt ggtggcctgt actggttatt accaggatgc gtttttcccg gaacatgtgg
    31561 tgacccgcag cgtgcaggaa ctggcgcagg agatggtcga tgaaattgaa cagggtatcg
    31621 atggcacgga gctgaaagcc gggctcatcg cggagatcgg ctccagcgaa ggaaagatta
    31681 cgccgctgga agagaaggta tttattgccg ctgcgctggc gcataaccag accggacgcc
    31741 cgatctccac gcatacgtcg ttcagcacca tggggctgga acaactggct ctgttgcaag
    31801 cccacggagt tgatctttcg cgcgtcaccg ttggtcactg cgatctgaaa gacaacctcg
    31861 acaacatttt gaagatgatc gatctcggcg cgtacgtgca gttcgacacc attggtaaga
    31921 acagttacta cccggacgaa aagcgcattg cgatgctcca cgcgctacgt gaccgtgggt
    31981 tgctgaaccg cgtcatgctg tcgatggata ttacgcgccg ctcccattta aaagccaatg
    32041 gtggttatgg ctatgactat ttattgacca cctttattcc gcaattgcgc cagtcaggat
    32101 tcagtcaggc cgatgtggat gtgatgttac gtgaaactcc ctctcaattt ttccaataag
    32161 gacagactca tgaaaaagat tggcgttgca ggcttacagc gtgagcagat taaaaaaacc
    32221 attgaagcga cggctcctgg cagttttgaa gttttcattc acaacgacat ggaagcggca
    32281 atgaaagtga aatccgggca actggattac tacatcggtg cgtgtaatac cggtgcgggc
    32341 gcggcattgt cgattgccat cgcggtgatt ggctataaca aaagttgcac cattgccaaa
    32401 ccaggcatta aagcgaaaga cgagcatatc gccaaaatga tcgctgaagg aaaagtggcg
    32461 tttggccttt ccgttgagca cgtcgaacac gcgattccga tgctgattaa ccatctgaaa
    32521 taaaaggcac gactatggat ctgtatattc agattatcgt ggtggcgtgc ctgacgggta
    32581 tgacatcgct tctggcgcat cgctcggcgg ctgtttttca tgacggcatc cgcccgatcc
    32641 tgccgcaact gattgaaggc tatatgaacc gtcgcgaggc ggggagtatc gcttttggtc
    32701 tgagcattgg ttttgtggcc tcggtgggga tctcttttac cctgaaaacc gggctgctca
    32761 acgcatggtt actctttctt cctaccgata tcctcggcgt actggcgata aacagcctga
    32821 tggcgtttgg tcttggcgct atctggggcg tgttgatcct tacttgcctg ttgccagtaa
    32881 accagctgct gaccgcgctg ccggtggatg tattaggtag cctcggggaa ttaagctcgc
    32941 cggtagtttc tgcttttgca ctgttcccgc tggtggcgat tttctaccag tttggctgga
    33001 agcaaagtct ggtcgccgcc gtggttgttc tgatgacccg tgtggtagtc gtgcgctatt
    33061 tcccacatct taaccctgaa tccatcgaaa tctttattgg catggtgatg ctgctgggga
    33121 tcgcgataac tcacgacctg cgtcatcgtg atgaaaatga tattgatgcc agcgggcttt
    33181 cggtgtttga agaacgcacg tcgcggatta tcaaaaactt accctatatc gccatcgtgg
    33241 gagcattgat tgccgccgtt gccagcatga agattttcgc cggcagtgaa gtgtcgatct
    33301 tcactctgga gaaagcgtac tccgcaggcg taacgccgga acaatcgcaa acgctgatca
    33361 accaggcggc actggcagaa tttatgcgcg ggctgggttt tgtaccgttg attgccacca
    33421 ccgccttagc aacgggtgtg tatgcagttg cgggctttac ctttgtttat gcggtgggct
    33481 atctctcgcc gaatccgatg gttgcagcgg tattaggcgc agtggttatt tcggcggaag
    33541 tcttgctgct tcgttctatc ggcaaatggc tgggacgcta cccgtcggtg cgtaatgcgt
    33601 cggataacat ccgtaacgcc atgaatatgc tgatggaagt ggcgctgctg gtcggttcga
    33661 ttttcgcagc aattaagatg gcgggttata ccggattctc tatcgcggtt gccatttact
    33721 tcctcaacga atccctgggc cgtccggtac agaaaatggc ggcaccggtc gtggcagtaa
    33781 tgatcaccgg tattctgctg aatgttcttt actggcttgg cctgttcgtt ccggcttaag
    33841 gaaggcacct atgaagacgt ttcctctgca aagcctgacg cttattgagg cgcagcaaaa
    33901 gcagtttgcg ctggtggaca cgatttgccg tcactttccc ggcgcggagt ttctaaccag
    33961 cggtgatttg ggcttaacgc cggggctgaa tcaaccgcgt attacccaac gggtggagca
    34021 ggtgctggct gatgcatttc acgcacaggc tgcggcgctg gtgcagggcg cggggactgg
    34081 cgcgattcgc gccgggctgg cagctttgct caaaccgggg cagcgtcttc tggtgcatga
    34141 cgcgcctgtt tacccgacga cacgggttat tattgagcag atggggctga cgcttattac
    34201 tgttgatttc aatgacctgt cggcactgaa gcaggtcgtc gacgagcaac aaccggatgc
    34261 ggcgctggtg cagcatacgc gccagcagcc gcaggacagc tacgtgctgg cagatgtgct
    34321 ggcaacgttg cgcgcggcag gtgttccagc gttaaccgat gacaactatg cggtgatgaa
    34381 ggtggcgcga atcggctgtg aatgcggcgc gaatgtctcg acattttcct gcttcaagct
    34441 atttgggcca gagggtgttg gtgcagtggt cggcgatgct gatgttatca accgtattcg
    34501 cgccacgctt tactccggcg gtagccagat ccagggcgca caggcgctgg aagtattgcg
    34561 ttgtctggtg tttgcgccag tgatgcacgc ggtgcaggca ggggtatctg aacggttgct
    34621 ggctttgctt aacggtggtg aggtgccgga agtgaaaagc gcggtgattg ctaatgcgca
    34681 gtcgaaggtg ttgattgtcg agtttcatca gccgattgcc gccagagtgc tggaagaggc
    34741 gcaaaagcgc ggtgccttgc cttacccggt gggtgcagag tcgaaatatg aaatcccgcc
    34801 gctcttttat cgcctttccg gaacgtttcg ccaggcgaat ccacaatcag aacattgtgc
    34861 gattcgcatt aacccgaatc gcagcggtga agagacggtg ctgcggattt tgcgtgagag
    34921 tattgccagt atttaatgct ggatagcacc gtcaagctaa attccgtact gaacggtccc
    34981 ctcgcccctt tggggagagg gttagggtga ggggaacgta cgggatgtaa aattcaacgc
    35041 gccagcatcg ccggatgcga tgctggcgca tcttatccgg cctacggtta atgtctttta
    35101 ttatcaatag ttaaggtgat gcgattggcg cggcagaaga gttcggagac gtgcaccggt
    35161 ttgtcattct gatcaaaggc gattttgctg atgcgaaaca acggttcgcc cagttcgcat
    35221 ttcagccatt ttgcctgcgg gcgggtggcg gcaaagatat cgatggtctt tttgtcgctg
    35281 accactcgcg tgtcaaaacg ctcctgaaat aactgatagg tggagcttcc ttcgacgtaa
    35341 atctcatcaa agtcaggata acgcgacagc gggatccatg aactatcaat aaacagcggc
    35401 tctttatcga gatacatcac ccggcagaga tggaacactt cgctgtttcc ggggatgttc
    35461 agctttttgc aaaacggcgc ggcgctgacc cgttcctgtt cgatcacttt ctctttcgtc
    35521 gccttgcctt gtgagacgcc aaaatcggta aaaccactga cagtaagcag ggcgttttca
    35581 actttctggc tttgtacaaa ggtgcctttt ccctgccagc ggatcagtac gccgtccgcc
    35641 actaagtcgc tgatggcttt gcgaatggta atgcggctga cgttatattg tgtacaaagc
    35701 tcgttttcgg tagggatctg ttgcccggcc tggtaaaccc cctgcgcgat atcatccagc
    35761 agtcgctggc ggacggtagc gtagaggagt tgatgagagt agcggtccgt agctgacata
    35821 atcgaccctg aaataaagaa tgaattactc ggattatagg gtcgttttcc ggcaagtaac
    35881 agcacgttgg cgtgaagatg ctcacgccaa cgttatacct accaggcacc gtggtactga
    35941 atggttttcg ccgcgcacgc cgttccctgc gccatcgcct gcggtaatgt catccccgca
    36001 gaccagccgc aaaggaatcc ggcaatgaac gaatctccgg cacccatggt gtcgataacc
    36061 gtcaccggtt caggagcctg acgccagaac tgcgcgccat cccaggcaat gctgccgttt
    36121 tcacccagcg tgacaatcac tgttcctgcg ccacgggcaa caatcgcttt catcttcaga
    36181 cgcagcgttt cgtcttcttg cggtgcggag gcaaaggcaa aatcgagatg cggcaccagt
    36241 gtctgccaga gcgggctgtc ccacttgtcg gagaagtcga aagcggtaag tttgcccgca
    36301 gcgtgcagct gtgggaatgc gtcttccgca tgtccccaga ttgccgcgtg cacaatgtca
    36361 tactgcgcca gccaggcgta atcctcttca ctcagggcaa agtcggccat cacgccttcg
    36421 gtgtagtcgc caaaaacgcg atcattgtcg tgcagttcca cctgagtttg tgcggtaacg
    36481 ccgtgtttcg tatggacatg gctgatatcg acgcccatgc gggcgagatc ctgcttcagc
    36541 tttgtgccgt agtcatcgtc acccacccag gtaatgcatc ccggctgtat gccgtagcga
    36601 gtgcagtaca ccgccacatt gaccgcatta ccgccagaaa acgctttatt cagttgcggg
    36661 tagatatcga cgcagttatc gccgattgtc gccagggttt tcatctctca tcctccggca
    36721 gcagcgcgcg aaagcgttcc agcgcctggc gggcatagag tctgggctcg ttcatataca
    36781 tcgtcaccag ctccaccgta cagtaaccct catagccccg ctcaataata tcgcgcatca
    36841 gttcccgcag cggcattttg ccttctccag gaatgtaatg cgtgtcgctg gccccgtcgc
    36901 tgtcgacaat atgcagatga cgtaatttat cgcccagttt gtcgaaataa ctcatcaccg
    36961 gttccgcctg gacatacggc gcgcaaatgt cgaccatgct gaacaggcgc ggcgaaggca
    37021 ccagcgccag cgcatgaagc acatcattag cattacacac gatgttcgat tcatacggcg
    37081 ttaacggttc gaggattaga tccatgccga tgttttccgc gtactcatac agttcgctta
    37141 ggttctctgc cagccgtccc cagataacat taggtggcgt gagatagccc gcgtgggccg
    37201 cggaaatcag cgtataaccc gcgttcatct cttttgccat atccatcgcc agcttgatca
    37261 tgtcgaggct ttcgcgacgc atatgttcat cgcccagcat catgttatac ggatagccat
    37321 tggtttctgg cgtatagccg ataatcggca tctgatacgt ctgcgccagc gccttgattt
    37381 gtttgatgcc gcccgctttt aagtccggcg cgaacgcgtg cgggcgaccg ccccaaattt
    37441 cgatgccgtc gtaacccagc tcgcttgcat cacgaaatgc gtgttcaata ggcagccgct
    37501 ggtggccgca ggtaaacata cctgttttca tcgggtaact ccttgcgtaa atccggcccg
    37561 ttgccgggcc gggcgaggga ttaatattcc accagaccac cgtaatagcg gcgttcatcc
    37621 gggttgtgat ctttgtaaat agacaggtag tagcagagcc actccattgg cacgaacatc
    37681 aggaacggtg ccagccacgg gtgcagccct tgcgaaattt cggcgtaatc gatgacgatc
    37741 acgttgtcag tacgctgttt aacaaagtta atggcgcgtt cggtggtgtg gcgactttca
    37801 tcattgccga gcaggaacag gaacggaacg cccggttcga caatctccag cgggccatgg
    37861 cggaactctc cgctctcaat cacgcagccg tgcgtccagg taaattccat cagcgttaca
    37921 atgccttctt tgtaacccag cggacgcagc ggacccgcag caacggtata aatcatcggc
    37981 cactggctgg ccagttcacc aagctggcgg cctttttctt cccaggtgcg taccagatga
    38041 ccgagcgcat tcggcaactg cttgagatcg tttttgatct tgccgatttc cgcgttcggc
    38101 gcgaggcggg tgatcatctc cagcaccacg ctgtagcaga gcagcaggtg aatttcccag
    38161 atacagtcgg cctgataatc aatgctaaat tccgccgccg aggtaatcgg gctgtccgcg
    38221 cgtttggtga acgccgcagt gagtgcgccg caggcccggc ccagctccag cgctttgatt
    38281 acctcttccg ttttaccgta gtcagaaacg ccaatcaccg cgcaacgatc gtcgaggcga
    38341 tacggggtgt tatcgcagaa ctcccagccg gaaatggcgt agacctgaag atcggaaaag
    38401 cgatccgcca gatgtttcgc cgcttgcgcc gcgttgagtg gcgagccgca ggcaacgaaa
    38461 taaatacgat caatgtcgcg cttcaccatc tcttccacga tggcgtgcac cagcggaacg
    38521 tcatggctga gaactttttc cacttcctga accatatttt cggtgaccag aaagtccacg
    38581 gtgcttttat caatatccaa cattttattt tctccagata acattacgac aaagcgttga
    38641 gctggcggct acgcttcgcc cagaaggcgt aagcaggcag accagtagca ataacgatga
    38701 cggcgcagat aaggccggga atcggtgccc agacaaaggt tgaggcgacc agaatgaggc
    38761 ttgacgcaat ggcgagggtg gtcatcagcc cgaaagcagg agtacgccac agcggtttgt
    38821 aatcgtcgcg tttacgacac cagatgatgg agccgaaggt gagggtattt ttgaaacaca
    38881 tcaccagggt gaaataaccc agcaggctgg tgagatcgga aacgaagatg aagaagagcc
    38941 ccagcgcccc ttgcaggatg atggagacat ccggcgtgtt gtatttcgga tgcacatggc
    39001 cgaagcattt aaagaacagg ttgtctttcg ccatcgcgta ttccagccgc ggctggtaca
    39061 tcacgcagct ggaaagcgaa ccaagaatga cgatcatcgc cgtgatggca acaaagatcc
    39121 cagcggtgct gccgagtgcg gggatccagg tcagggcgtc ggaaatcggc gtttcagaat
    39181 tggcgagttt gtcgaagggc atcaggtcgg aaatcaccag cgccagcagg gtgtagagca
    39241 ccagaaccag cagacaggaa ccaatcagcg ctcgtggcat ggtttttccg gggtttttaa
    39301 tttcgccggt catataacag atagaggcca tgccggtata cgaccaactg gtggcagaga
    39361 tccccgccag cagcgccata aagctgcccg ttgcgccaat cgcagtggtg gtaggggcgg
    39421 caaaattctc cgctttaaac cagaagatcc caaggccaat gacgatagtg aacgggataa
    39481 ttttggcgat ggtaattagc gtctgaaacg ctgcgccgcc ttcaacggag cgcaggtgta
    39541 gcaacataaa ggcgataatt aatccggcgg cgataaattt accgggcaac ggatcgatag
    39601 gcgttaaaaa gccaagattg ctgacaatcg ccagcgccat aatcgacaat gacggcgcat
    39661 cgttggccca gaagctggcc cagccggaga ggaaagccag cggtcggctt ccggcatttt
    39721 tcagataaac ataatctgcg ccattttccg gataagcggt ggatagttcc gcatagacgc
    39781 acatttgcgg gatcacaatt aacccgccaa tgacaaacgt gagcaccgta agccacggcg
    39841 tgcccgctgc ttttgccact tcacccacag atacaaaaat accggagccg acggttgtcc
    39901 cgacggcgat tgcaagaacg gcccaaaatc cgagcttgcg ttggagttcc tggcttccca
    39961 tagcgatacc tttttcttgt ccaacacgtt gtaggggaga gtttgcagtc atttaaaagg
    40021 taacatgaca atgcatgatg aatataataa catatgatgt tatgtaatgc ggaggaagat
    40081 cacaaaattt cgcacaggat cgcgctgtgg ctaatgaatg tagttatcca attgaaatta
    40141 aagtgaaaat atttttacgg gtggggagca agaaggatat agaaacaaat acgccctcgg
    40201 aaaatccaga gggcgtcggg caattaaacc ggtgttagcc gatttctgtc agagacttac
    40261 tgtgcagtag gaccgcaacc gccaatgatt ttagaaatag aaattgccgg gtgcagcagg
    40321 tagtcgtaag agcagttctt atcacggttt tcaatatgac cagtacatgc agttaacgta
    40381 gccagtactg cacctaccag tgcaacttta ataaatttgt tcatt
//
LOCUS       DADMJE010000013        40274 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.013, whole genome shotgun sequence.
ACCESSION   DADMJE010000013 DADMJE010000000
VERSION     DADMJE010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 40274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 40274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..40274
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.013"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JN001_000663"
     CDS             complement(457..2148)
                     /gene="fruA"
                     /locus_tag="JN001_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIBC"
                     /protein_id="HAY9051991.1"
                     /translation="MKTLLIIDANLGQARAYMAKTLLGAVARKAKLEIIDNPNDAEMA
                     IVLGDSIPNDSALNGKNVWLGDISRAVAHPELFLSEAKGHAKPYTAPVAATAPVAASG
                     PKRVVAVTACPTGVAHTFMAAEAIETEAKKRGWWVKVETRGSVGAGNAITPEEVAAAD
                     LVIVAADIEVDLAKFAGKPMYRTSTGLALKKTAQELDKAVAEATPYEPAGKAQTATTE
                     GKKESAGAYRHLLTGVSYMLPMVVAGGLCIALSFAFGIEAFKEPGTLAAALMQIGGGS
                     AFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSTGSGFIGGIIAGFLAGYIAKLIS
                     TQLKLPQSMEALKPILIIPLISSLVVGLAMIYLIGKPVAGILEGLTHWLQTMGTANAV
                     LLGAILGGMMCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATMV
                     ARRKFDKAQQEGGKAALVLGLCFISEGAIPFAARDPMRVLPCCIVGGALTGAISMAIG
                     AKLMAPHGGLFVLLIPGAITPVLGYLVAIIAGTLVAGLAYAFLKRPEVDAVAKAA"
     gene            complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JN001_000664"
     CDS             complement(2165..3103)
                     /gene="fruK"
                     /locus_tag="JN001_000664"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HAY9051992.1"
                     /translation="MSRRVATITLNPAYDLVGFCPEIERGEVNLVKTTGLHAAGKGIN
                     VAKVLKDLGIDVTVGGFLGKDNQDGFQQLFSELGIANRFQVVQGRTRINVKLTEKDGE
                     VTDFNFSGFEVTPADWERFVTDSLSWLGQFDMVCVSGSLPSGVSPEAFTDWMTRLRSQ
                     CPCIIFDSSREALVAGLKAAPWLVKPNRRELEIWAGRKLPEMKDVIEAAHALREQGIA
                     HVVISLGAEGALWVNASGEWIAKPPSVDVVSTVGAGDSMVGGLIYGLLMRESSEHTLR
                     LATAVAALAVSQSNVGITDRPQLAAMMARVDLQPFN"
     gene            complement(3103..4233)
                     /locus_tag="JN001_000665"
     CDS             complement(3103..4233)
                     /locus_tag="JN001_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused PTS fructose transporter subunit IIA/HPr
                     protein"
                     /protein_id="HAY9051993.1"
                     /translation="MFQLSVQDIHPGEKAGDKEEAIRQVAAALVQAGNVAEGYVNGML
                     AREQQTSTFLGNGIAIPHGTTDTRDQVLKTGVQVFQFPEGVTWGDGQVAYVAIGIAAS
                     SDEHLGLLRQLTHVLSDDSVAEQLKSATTAEELRALLMGEKQSEQLKLDNEMLTLDIV
                     ASDLLTLQALNAARLKEAGAVDATFVTKAINEQPLNLGQGIWLSDSAEGNLRSAIAVS
                     RAANAFAVDGETAAMLVSVAMNDDQPIAVLKRLADLLLDNKADRLLKADAATLLALLT
                     SDDAPTDDVLSAEFVVRNEHGLHARPGTMLVNTIKQFNSDITVTNLDGTGKPANGRSL
                     MKVVALGVKKGHRLRFTAQGADAEQALKAIGDAIAAGLGEGA"
     gene            4601..5782
                     /gene="setB"
                     /locus_tag="JN001_000666"
     CDS             4601..5782
                     /gene="setB"
                     /locus_tag="JN001_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar efflux transporter SetB"
                     /protein_id="HAY9051994.1"
                     /translation="MHNSPAVSSAKSFDLTSTAFLIVAFLTGIAGALQTPTLSIFLTD
                     EVHARPAMVGFFFTGSAVIGILVSQFLAGRSDKRGDRKSLIVFCCLLGVLACTLFAWN
                     RNYFVLLFVGVFLSSFGSTANPQMFALTREHADKTGREAVMFSSFLRAQVSLAWVIGP
                     PLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMQKELPLATGTVEAPRRNRRDT
                     LLLFVICTLMWGSNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFA
                     KRLGKRFLMRVAAVGGVCFYAGMLMAHSPAILLGLQLLNAIFIGILGGIGMLYFQDLM
                     PGQAGSATTLYTNTSRVGWIIAGSVAGIVAEIWNYHAVFWFAMVMIIATLFCLLRTKD
                     V"
     gene            complement(5779..6033)
                     /locus_tag="JN001_000667"
     CDS             complement(5779..6033)
                     /locus_tag="JN001_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
                     /protein_id="HAY9051995.1"
                     /translation="MECRPGCGACCTAPSIFSPIPGMPDGKPANTPCIQLDEQQRCKI
                     FTSPLRPKVCAGLQASAEMCGNSRQQAMTWLIDLEMLTAS"
     gene            6188..6760
                     /gene="yeiP"
                     /locus_tag="JN001_000668"
     CDS             6188..6760
                     /gene="yeiP"
                     /locus_tag="JN001_000668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007750416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P-like protein YeiP"
                     /protein_id="HAY9051996.1"
                     /translation="MPRANEIKKGMVLNYNGKLLLVKDIDIQSPTARGAATLYKMRFS
                     DVRTGLKVEERFKGDDIVDTVTLTRRYVDFSYVDGNEYVFMDKEDYTPYTFTKDQIEE
                     ELLFMPEGGMPDMQVLTWDGQLLALELPQTVDLEIVETAPGIKGASASARNKPATLST
                     GLVIQVPEYLSPGEKIRIHIEERRYMGRAD"
     gene            6983..8449
                     /locus_tag="JN001_000669"
     CDS             6983..8449
                     /locus_tag="JN001_000669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY9051997.1"
                     /translation="MKTIASVTLPHHVHAPRYDRQQLQSRIVHFGFGAFHRAHQALLT
                     DRVLNAQGGDWGICEISLFSGDQLMSQLRAQNHLYTVLEKGADGNQVIIVGAVHECLN
                     AKLDSLAAIIEKFCEPQVAIVSLTITEKGYCIDPATGALDTSNPRIIHDLQTPEEPHS
                     APGILVEALKRRRERGLTPFTVLSCDNIPDNGHVVKNAVLGMAEKRSPELAGWIKEHV
                     SFPGTMVDRIVPAATDESLAEISQHLGVNDPCAISCEPFIQWVVEDNFVAGRPAWEVA
                     GVQMVNDVLPWEEMKLRMLNGSHSFLAYLGYLSGFAHISDCMQDRAFRHAARTLMLNE
                     QAPTLQIKDVDLTQYADKLIARFANPALKHKTWQIAMNGSQKLPQRMLAGIRIHLGRE
                     TDWSLLALGVAGWMRYVSGVDDAGNAIDVRDPLSDKIRELVAGSSSEQRVTALLSLRE
                     VFGDDLPDNPHFVQAIEQAWQQIVQFGAHQALLNTLKI"
     gene            8567..9553
                     /locus_tag="JN001_000670"
     CDS             8567..9553
                     /locus_tag="JN001_000670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HAY9051998.1"
                     /translation="MTRTNLITGFLGSGKTTSILHLLAHKDPNEKWTVLVNEFGEVGI
                     DGALLADSGALLKEIPGGCMCCVNGLPMQVGLNTLLRQGKPDRLLIEPTGLGHPKQIL
                     DLLTAPVYEPWIDLRATLCILDPRLLLDEKSASNENFRDQLAAADIIVANKSDRATPE
                     SEQALQRWWQQNGGDRQLIHSEHGKVDGHLLDLPRRNLAELPASAAHSHQHVVKKGLA
                     ALSLPEHQRWRRSLNSGQGYQACGWIFDADTVFDTIGILEWARLAPVERVKGVLRIPE
                     GLVRINRQGDDLHIETQNVAPPDSRIELISSSEADWNALQSALLKLRLATTA"
     gene            9592..10305
                     /gene="lpxT"
                     /locus_tag="JN001_000671"
     CDS             9592..10305
                     /gene="lpxT"
                     /locus_tag="JN001_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kdo(2)-lipid A phosphotransferase"
                     /protein_id="HAY9051999.1"
                     /translation="MIKNLPQIVLLNIVGLALFLSWYIPVNHGLWLPIDADIFYFFNQ
                     KLVESKAFLWLVALTNNRAFDGCSLLAMGMLMLSFWLKENAPGRRRIVIIGLVMLLTA
                     VVLNQLGQALIPVKRASPTLTFTNINRVSELLSVPTKDASRDSFPGDHGMMLLIFSAF
                     MWRYFGKVAGLIALIIFVVFAFPRVMIGAHWFTDIIVGSMTVILIGLPWVLLTPLSDR
                     LITFFDKSLPGKNKHFQNK"
     gene            10717..11283
                     /gene="mepS"
                     /locus_tag="JN001_000672"
     CDS             10717..11283
                     /gene="mepS"
                     /locus_tag="JN001_000672"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional murein DD-endopeptidase/murein
                     LD-carboxypeptidase"
                     /protein_id="HAY9052000.1"
                     /translation="MVKSQPILRYILRGIPAIAVAVLLSACSANNTAKNMHPETRAVG
                     SETSSLQASQDEFENLVRNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTF
                     REQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGSTGRHVGIYIGNNQFVHAST
                     SSGVIISSMNEPYWKKRYNEARRVLSRS"
     gene            11464..13020
                     /locus_tag="JN001_000673"
     CDS             11464..13020
                     /locus_tag="JN001_000673"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY9052001.1"
                     /translation="MFIRAPNSGRKLLLTCIVAGVMIAILVSCLQFLVAWHKHEVKYD
                     TLIIDVQKYLDTYFADLKSTTDRLQPLTLDTCQQANPELTARAAFSMNVRTFVLVKDK
                     KTFCSSATGEMDIPLNELIPALDINKNVDMAILPGTPMVPNKPAIVIWYRNPLLKNSG
                     VFAALNLNLTPSLFYSSRQEDYDGVALIIGNTALSTFSSRLMNVNELTDMPVRETKIA
                     GIPLTVRLYADDWTWNDVWYAFLLGGMSGTVVGLLCYYLMSVRMRPGREIMTAIKREQ
                     FYVAYQPVVDTQALRVTGLEVLLRWRHPVAGEIPPDAFINFAESQKMIVPLTQHLFEL
                     IARDAAELEKVLPVGVKFGINIAPDHLHSESFKADIQKLLTSLPAHHFQIVLEITERD
                     MLKEQEATQLFAWLHSVGVEIAIDDFGTGHSALIYLERFTLDYLKIDRGFINAIGTET
                     ITSPVLDAVLTLAKRLNMLTVAEGGETPEQARWLSEPGVNFMQGYWISRPLPLDDFVR
                     WLKKPYTPQW"
     gene            13102..14916
                     /locus_tag="JN001_000674"
     CDS             13102..14916
                     /locus_tag="JN001_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311096.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY9052002.1"
                     /translation="MIVRILLLFIALFTFGAQAQAIKESYAFAVLGEPRYAFNFNHFD
                     YVNPAAPKGGQITLSALGTFDNFNRYALRGNPGARTEQLYDTLFTTSDDEPGSYYPLI
                     AESARYADDYSWVEVAINPRARFHDGSPITARDVEFTFQKFMTEGVPQFRLVYKGTTV
                     KAIAPLTVRIELAKPGKEDMLSLFSLPVFPEKYWKDHKLSDPLATPPLASGPYRVTSW
                     KMGQNIVYSRVKDYWAANLPVNRGRWNFDTIRYDYYLDDNVAFEAFKAGAFDLRMEND
                     AKNWATRYTGKNFDKKYIIKDEQKNESAQDTRWLAFNIQRPVFSDRRVREAITLAFDF
                     EWMNKALFYNAWSRTNSYFQNTEYAARNYPDAAELVLLAPMKKDLPPEVFTQIYQPPV
                     SKGDGYDRDNLLKADTLLNEAGWVLKGQQRVNATTGQQLSFELLLPASSNSQWVLPFQ
                     HSLQRLGINMDIRKVDNSQITNRMRSRDYDMMPRLWRAMPWPSSDLQISWSSEYINST
                     YNAPGVQSPVIDSLINQIIAAQGNKEKLLPLGRALDRVLTWNYYMLPMWYMAEDRLAW
                     WDKFSHPAVRPVYSLGIDTWWYDVNKAAKLPSARQQGE"
     gene            14917..16011
                     /locus_tag="JN001_000675"
     CDS             14917..16011
                     /locus_tag="JN001_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter permease YejB"
                     /protein_id="HAY9052003.1"
                     /translation="MGAYLIRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIAAIEF
                     GNAGVLPGAGGEGVRASHAQTGVGNISDSNYRGGRGLDPEVIAEITHRYGFDKPIHER
                     YFKMLWDYIRFDFGDSLFRSASVLTLIKDSLPVSITLGLWSTLIIYLVSIPLGIRKAV
                     HNGSRFDVWSSAFIIIGYAIPAFLFAILLIVFFAGGSYFDLFPLRGLVSANFDSLPWY
                     QKITDYLWHITLPVLATVIGGFAALTILTKNSFLDEVRKQYVVTARAKGVSEKNILWK
                     HVFRNAMLLVIAGFPATFISMFFTGSLLIEVMFSLNGLGLLGYEATVSRDYPVMFGTL
                     YIFTLIGLLLNIVSDISYTLVDPRIDFEGR"
     gene            16011..17036
                     /locus_tag="JN001_000676"
     CDS             16011..17036
                     /locus_tag="JN001_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9052004.1"
                     /translation="MSRLSPVNQARWARFRHNRRGYWSLWIFLVLFGLSLCSELIAND
                     KPLLVRYDGSWYFPLLKNYSESDFGGPLASQADYQDPWLKQRLENNGWVLWAPIRFGA
                     TSINFATDKPFPSPPSRQNWLGTDANGGDVLARILYGTRISVLFGLMLTLCSSVMGVL
                     AGALQGYYGGKVDLWGQRFIEVWSGMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSL
                     VGVVRAEFLRTRNFDYIRAAQALGVSDRSIILRHMLPNAMVATLTFLPFILCSSITTL
                     TSLDFLGFGLPLGSPSLGELLLQGKNNLQAPWLGITAFLSVAILLSLLIFIGEAVRDA
                     FDPNKAV"
     gene            17038..18627
                     /gene="yejF"
                     /locus_tag="JN001_000677"
     CDS             17038..18627
                     /gene="yejF"
                     /locus_tag="JN001_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin C ABC transporter ATP-binding protein
                     YejF"
                     /protein_id="HAY9052005.1"
                     /translation="MTQTLLAIEDLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGES
                     GSGKSVTALSILRLLPSPPVEYLSGDIRFRGESLLHASDQTLRGVRGNKIAMIFQEPM
                     VSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGG
                     ERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLS
                     IVRKLAHRVAVMQNGRCVEQNYAATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLL
                     DVEQLQVAFPIRKGILKRIVDHNVVVKNISFTLRAGETLGLVGESGSGKSTTGLALLR
                     LINSQGSIIFDGQPLQNLNRRQLLPIRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVH
                     QPTLSAAQREQQVIAVMHEVGLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILD
                     EPTSSLDKTVQAQILTLLKSLQQKLQLAYLFISHDLHVVRALCHQVIVLRQGEVVEQG
                     PCARVFAAPQQEYTRQLLALS"
     gene            complement(18631..18975)
                     /locus_tag="JN001_000678"
     CDS             complement(18631..18975)
                     /locus_tag="JN001_000678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052006.1"
                     /translation="MTSLQLSIVHRLPQNFRWSAGFAGSKVEPIPQNGPCGDNSLVAL
                     KLLSPDGDNAWSVMYKLSQALSDIEVPCSVLECEGEPCLFVNRQDEFAATCRLKNFGV
                     AIAEPFSNYNPF"
     gene            complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JN001_000679"
                     /pseudo
     CDS             complement(19308..20491)
                     /gene="bcr"
                     /locus_tag="JN001_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311101.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Bcr"
     gene            complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JN001_000680"
     CDS             complement(20519..21214)
                     /gene="rsuA"
                     /locus_tag="JN001_000680"
                     /EC_number="5.4.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA pseudouridine(516) synthase RsuA"
                     /protein_id="HAY9052007.1"
                     /translation="MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGEIVRNAAFKLLPE
                     HDVAYDGNPLAQQHGPRYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAWKLHAAGRLD
                     IDTTGLVLMTDDGQWSHRITSPRHHCEKTYLVTLESPVADDTAEQFAKGVQLHNEKDL
                     TKPAVLEVITPTQVRLTISEGRYHQVKRMFAAVGNHVVELHRERIGGITLDADLAPGE
                     YRPLTEEEIASVV"
     gene            21363..23123
                     /locus_tag="JN001_000681"
     CDS             21363..23123
                     /locus_tag="JN001_000681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HAY9052008.1"
                     /translation="MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAEL
                     ARLARGRVLVLAHVKELVAQNHAKYQALGLEADIFAAGLKRKESHGKVVFGSVQSVAR
                     NLDAFQGEFSLLIVDECHRIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGW
                     IYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQS
                     NGLFSEADLNRELKKQQRITPHIISQIMEFAEKRKGVMIFAATVEHAKEIVGLLPAED
                     AALITGDTPGAERDVLIEDFKAQRFRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLY
                     QQIVGRGLRLAPGKTDCLILDYAGNPHDLYAPEVGTPKGKSDNVPVQVFCPACGFANT
                     FWGKTTADGTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
                     CDTVLVDPDDMLKAALRLKDALVLRCSGMSLQHGHDEKGEWLKITYYDEDGADVSERF
                     RLQTPAQRTAFEQLFIRPHTRTPGIPLRWITAADILAQQALLRHPDFVVARMKGQYWQ
                     VREKVFDYEGRFRRAHELRG"
     gene            23248..23532
                     /gene="rplY"
                     /locus_tag="JN001_000682"
     CDS             23248..23532
                     /gene="rplY"
                     /locus_tag="JN001_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000494192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25"
                     /protein_id="HAY9052009.1"
                     /translation="MFTINAEVRKEQGKGASRRLRAANKFPAIIYGGKEAPLAIELDH
                     DKVMNMQAKAEFYSEVLAIVVDGKEIKVKAQDVQRHPYKPKLQHIDFVRA"
     gene            complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JN001_000683"
     CDS             complement(23671..24678)
                     /gene="yejK"
                     /locus_tag="JN001_000683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein YejK"
                     /protein_id="HAY9052010.1"
                     /translation="MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTETVVEMVAELH
                     RVYSAKNKAYGLFSEESELAQTLRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGF
                     VLFCHYRYLAVEYLLVAVLSNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
                     PESTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAE
                     RQNVRQQVYSYCNEQLQAGEEIELESLSKELAGVSEVSFTKFAAEKGYELEESFPADR
                     STLRQLTKFAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGG
                     N"
     gene            24860..25087
                     /locus_tag="JN001_000684"
     CDS             24860..25087
                     /locus_tag="JN001_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YejL family protein"
                     /protein_id="HAY9052011.1"
                     /translation="MPQISRYSDEQVEQLLAELLNVLEKHKAPTDLSLMVLGNMVTNL
                     INTSIAPAQRQAIANSFARALQSSINEDKAH"
     gene            25107..26867
                     /gene="pbgA"
                     /locus_tag="JN001_000685"
     CDS             25107..26867
                     /gene="pbgA"
                     /locus_tag="JN001_000685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin transport protein PbgA"
                     /protein_id="HAY9052012.1"
                     /translation="MVTHRQRYREKVSQMVSWGHWFALFNILLSLVIGSRYLFIADWP
                     TTLAGRIYSYVSIIGHFSFLVFATYLLILFPLTFIVGSQRLMRFLSVILATAGMTLLL
                     IDSEVFTRFHLHLNPIVWQLVINPDENEMARDWQLMFISVPVILLLELVFATWSWQKL
                     RSLTRRRRFARPLAAFLFIAFIASHVVYIWADANFYRPITMQRANLPLSYPMTARRFL
                     EKHGLLDAQEYQRRLIEQGNPDAVSVQYPLSELRYRDMGTGQNVLLITVDGLNYSRFE
                     KQMPALAGFAEQNISFTRHMSSGNTTDNGIFGLFYGISPSYMDGILSTRTPAALITAL
                     NQQGYQLGLFSSDGFTSPLYRQALLSDFSMPSVRPQSDEQTATQWINWLGRYAQEDNR
                     WFSWVSFNGTNIDDSNQQAFARKYSRAAGNVDDQINRVLNALLDSGKLDNTVVIITAG
                     RGIPLSEDEETFDWSHGHLQVPLVIHWPGTPAQRINALTDHTDLMTTLMQRLLHVSTP
                     ASEYSQGQDLFNPQRRHYWVTAADNDTLAITTPKKTLVLNNNGKYRTYNLRGERVKDE
                     KPQLSLLLQVLTDEKRFIAN"
     gene            26942..27018
                     /locus_tag="JN001_000686"
     tRNA            26942..27018
                     /locus_tag="JN001_000686"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26976..26978,aa:Pro,seq:ggg)
     gene            27237..28478
                     /locus_tag="JN001_000687"
     CDS             27237..28478
                     /locus_tag="JN001_000687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000101912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9052013.1"
                     /translation="MARKTPPLTTVQIKAARPAEKEYTLQDGGGLFLLVKPSGSKLWR
                     FSYYRPSDKKRILLSFGSLDDVSLADARKRRSEYRALISAGTDPQGHEKKKREAEARR
                     QGNTFENVAAAWYQVKISQNLAPNTIKDIWRSLDKYVFPFIGNTPIDTLTARRFVEVL
                     TPIKERGNLETLKRVLQRVNEVMDYAANSGLIDANPAMNVRKAFPSPVKKHMPTIRPE
                     QLPELMQALSVSATERQTRLLIEWQLLTVTRPAEASSTRWDEINLDAKQWTIPAGRMK
                     MRRDHVIPLSGQAMAVLEAMKPISHHRNYVFPSLKDPQQPMNSQTANAALRRMGFAGV
                     LVSHGLRAIFSTAANEEGFEPDVIEAALAHVDTNEVRRAYNRSNYIEKRIVLMRWWGE
                     FVEAAATGVTLASGKRGIRAV"
     gene            28974..29180
                     /locus_tag="JN001_000688"
     CDS             28974..29180
                     /locus_tag="JN001_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000387479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY9052014.1"
                     /translation="MEAIRKIIFRQEVKKIIHIKADSTLQSMINAGEFPQGFRVGLRR
                     RGWYEDDVLAWQKEREQEARGTAA"
     gene            29195..29860
                     /locus_tag="JN001_000689"
     CDS             29195..29860
                     /locus_tag="JN001_000689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001329530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052015.1"
                     /translation="MTNTKKAAPIWSRLSEQLTRCALCVYDPKHKHGDDSRYQAGGQC
                     NQSGSVRCHTCNERFSLYSLRNCSRAKAHGANLSDSCSIFLRRLFRAGDNVLVNSLSV
                     IVLSCIAMRRNTSHHGADSFYPLGSMPRRFSSVRPNSLSQLARLMPSLCASLSNCSFS
                     SGEIRILNCGDCPSPLGLLSRLIIDKWSPIELAFPLLGGHLNTRALKKAKPRKCHYHS
                     QGF"
     gene            29886..30086
                     /locus_tag="JN001_000690"
     CDS             29886..30086
                     /locus_tag="JN001_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000226783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host cell division inhibitor Icd-like protein"
                     /protein_id="HAY9052016.1"
                     /translation="MVAVNHIPHLVHTQTAFVWRFLALSAGESQIIHVTAWTEREARS
                     RCPSGCVAVFAARIRQGETYAQ"
     gene            30076..30297
                     /locus_tag="JN001_000691"
     CDS             30076..30297
                     /locus_tag="JN001_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001372127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052017.1"
                     /translation="MHNKTTPNAAAAALTTLMHALIDIECTAELAQGEEQKDRTQFAL
                     ECIRYIATRSLNDAKNILVADCENGGGYA"
     gene            30290..30523
                     /locus_tag="JN001_000692"
     CDS             30290..30523
                     /locus_tag="JN001_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052018.1"
                     /translation="MRDDRFNSLKQEFPGVPDDAADALSSMPELIRAAFFLLSTREYK
                     STGLDVLNIAADYAEYVAEARYRRKFPEDVSHA"
     gene            30516..30749
                     /locus_tag="JN001_000693"
     CDS             30516..30749
                     /locus_tag="JN001_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052019.1"
                     /translation="MRDIYHETIDRAFLALSHSENMLEILRIWLETLGDNERDKQKSR
                     IATALITLLEPVIMELQEIDLLHDRYKEQHTGE"
     gene            30755..31054
                     /locus_tag="JN001_000694"
     CDS             30755..31054
                     /locus_tag="JN001_000694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4222 domain-containing protein"
                     /protein_id="HAY9052020.1"
                     /translation="MKLKYSGLTASGNTHPKFTRGDIYRDQYGGTVMIKGVEERRVTY
                     RREGYEYDCVMPVYQFRRDFSLVQTAPHNVPTSNARARANIQKLKTMINGFRGKK"
     gene            31051..32451
                     /locus_tag="JN001_000695"
     CDS             31051..32451
                     /locus_tag="JN001_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000833619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY9052021.1"
                     /translation="MKSAPNLKKQPYDKMTEVIIFAGSDAWAHAKQWQEQDGRLAGDN
                     VPPVVLADDQLDELADLRIIDEGRYCVRLYKAGHIRPSNINAIAHKLAAAGVTDANYY
                     PEGMHSHMRENWREYLERVRGKEPVEEKNHQRKTTLPMSVGSTGYDTQLDYVVKGIIP
                     AVSLCSIYGASGSYKSFLAGSWACHVATGRQWGGRRVAHGAVLYVVGEGGIGVPRRVK
                     AWEVVHDEQVKNLYLVNRPIFPAAPLDVDEMVIAARQVERETGKPVRMIILDTLARCF
                     GGNDENDSRDMGAFIRGCDELKRRTGATVLVVHHSGKDETKGARGSSAFRASLDAEYR
                     IRREDAGSKALVISCTKMKDAEELKEAAYDLRVVELFTDADGELITSLVVVDDPRPPV
                     ELERIEEAGNKTENHTALWGCIRSRTQNGDKCTIPLLRDDMKKLGYEMKNFRRWLYKL
                     EKDGVISIDGDDVAPL"
     gene            32652..32903
                     /locus_tag="JN001_000696"
     CDS             32652..32903
                     /locus_tag="JN001_000696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000192401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052022.1"
                     /translation="MTQKRRDRTEPKYKALDMTEHTLKVAIRTIDRHTREGYAKEHPD
                     LISAFMTTAAANFATLTEREIAEAEQVTTINVKTGEVEL"
     gene            32900..33310
                     /locus_tag="JN001_000697"
     CDS             32900..33310
                     /locus_tag="JN001_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY9052023.1"
                     /translation="MTAQIAAYGRLVDDPQVKQTSKGTPMTLARMAVSLPCSQAQDGQ
                     ATLWLSVIAFGKQADFLAKHQKGDVASVSGTMQVSQWTGQNGETRQGWQVIADSVISA
                     RAARPGGNRRKTTGTQGNQPPAGGDDPYGDDISF"
     gene            33321..33593
                     /locus_tag="JN001_000698"
     CDS             33321..33593
                     /locus_tag="JN001_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PerC family transcriptional regulator"
                     /protein_id="HAY9052024.1"
                     /translation="MVHDRIAEELEAKGFYRRAAARWGEVMQLVETDKERHHITMRRL
                     ECSRKAQRAPEPPDNFGDLKKAVDRTYAEMGIDGAGDEIWRNYQDS"
     gene            33719..33943
                     /locus_tag="JN001_000699"
     CDS             33719..33943
                     /locus_tag="JN001_000699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309616.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052025.1"
                     /translation="MPMKFDEILKQRDKYHADNMETMSINDYRAFLETGALIEKDQHG
                     FVRCALSGEMLAVNPEQIDALIEFLKEIRD"
     gene            34195..34401
                     /locus_tag="JN001_000700"
     CDS             34195..34401
                     /locus_tag="JN001_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000796968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052026.1"
                     /translation="MAEEKKGGVSVYISPEIVEVLKQRHKKNYEAGVAAGLDPLMTPE
                     PSIGSLVRSYLLAALGMHKNYGGE"
     gene            34401..35456
                     /locus_tag="JN001_000701"
     CDS             34401..35456
                     /locus_tag="JN001_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major capsid protein"
                     /protein_id="HAY9052027.1"
                     /translation="MAGKATALNTNQLFMYLNRGDIADFKFSPLFTTLFFPNVATFST
                     QNIMLDTLDIEEVTMSAFCSPMVGSQVQRDKGYETSTIKPGYMKPKHEIDPTKTIMRM
                     AGEDPAQLNDPTYRRMRLITGNMRRQINAIKARVEWLAVNAVTTGKNIIEGEGIERYE
                     IDWKIPEKNIIEQSDGKKWSEHDKDIYDPIYDIELYADQAGCPANVMIMGAEVWRTLR
                     SFKKFRELYDLSRGSESAAEMACKNLGEVVSFKGYLGDIALIVYSGKYTDSDGTEKYF
                     LEPDLLVLGNTNNKGLVAYGAIMDQEAVRTGATQNMYYPKNWIEDGDPAIEYVQTHSA
                     PQPVPADIRKFVTVKIG"
     gene            35468..35803
                     /locus_tag="JN001_000702"
     CDS             35468..35803
                     /locus_tag="JN001_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head decoration protein"
                     /protein_id="HAY9052028.1"
                     /translation="MDTPYIELFAGSQQVSTTLVHFAADAGVIQEFTPLMLVDNGEFK
                     PWDGQESGKAVYLTSYLVDTSKQKSAQCYKTGIFNIAAVNWPESVDTDAKKCAAFAGS
                     GVSVQPLAR"
     gene            35816..36229
                     /locus_tag="JN001_000703"
     CDS             35816..36229
                     /locus_tag="JN001_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016240519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head-tail connector protein"
                     /protein_id="HAY9052029.1"
                     /translation="MATNESIMALPLASKFKAEARAMADRGLSTYEAVYQLNKLEEQD
                     KPRADAIMALHEHKDYQPLLRAMANVPCIDVDTAKNILNMTIEQERPKVAPELTAAFE
                     NFMDMHSPQTVSAGMAYDGRNPGDDGDIDRILKTI"
     gene            36391..36825
                     /locus_tag="JN001_000704"
     CDS             36391..36825
                     /locus_tag="JN001_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000565611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052030.1"
                     /translation="MIDKACFVSQQEIAEHFKVNRTTIRAWTKQGMPYLNADRGKSGG
                     YHIGHTLLWSSGKSRLEAIRYHVETSALEKIMFARLLSSERDEYSSEETEHRFDEGLQ
                     IYGYSPEDVSKARNKMAGFLAGWRHAVSVRRASMEQSADTEQ"
     gene            37106..37387
                     /locus_tag="JN001_000705"
     CDS             37106..37387
                     /locus_tag="JN001_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052031.1"
                     /translation="MTEAEILGLIRRAGGISQQTDEQATQPDSVTAENYARVVAEVMR
                     RDGIQLNDVDMRNIRIRVLEMLAYNRRVALYRETEKITYHWKKPERLRR"
     gene            complement(38065..>40274)
                     /gene="yejO"
                     /locus_tag="JN001_000706"
     CDS             complement(38065..>40274)
                     /gene="yejO"
                     /locus_tag="JN001_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311108.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter YejO"
                     /protein_id="HAY9052032.1"
                     /translation="TIKGGRLIVEKDGITVLAAIEKGGLLEVKEGGLAIAVDQKAGGA
                     IKASTRVMEAFGINRLGQFEIKNGIANNMLLENGGSLRVEENDFAYNTTVDSGGLLEV
                     MDGGTATGVDKKAGGKLIVSTNALEVSGTNSKGQFSIKDGVSKNYELDDGSGLIVMED
                     TQAIDTILDEHATMQSLGKDTGTKVQANAVYDLGRSDQNGSITYSSKAISENMVINNG
                     RANVWAGTMVNVSVRGNDGILEVMKPQINYAPAMLVGKVVVSEGASFRTHGAVDTSKA
                     DVSLENSVWAIIADITTTNQNTLLNLANLAMSDANVIMMDEPVTRSSVTASAENFITL
                     TTNTLSGNGNFYMRTDMANHQSDQLNVTGQATGDFKIFVTDTGASPAAGDSLTLVTTG
                     GGDAAFTLGNAGGVVDIGTYEYTLLDNGNHSWSLAENRAQITPSTTDVLNMAAAQPLV
                     FDAELDTVRERLGSVKSVSYDTAMWSSAINTRNNVTTDAGAGFEQTLTGLTLGIDSRF
                     SREESSTIRGLFFGYSHSDIGFDRGGKGNIDSYTLGAYAGWEHQNGAYVDGVVKVDRF
                     ANTIHGKMSNGATAFGDYNSNGAGAHVESGFRWVDGLWSVRPYLAFTGFTTDGQDYTL
                     SNGMRADVGNTRILRAEAGTAVSYHMDLQNGTTLEPWLKAAVRQEYADSNHVKVNDDG
                     KFNNDVAGTPGVYQAGIRSSFTPTLSGHLSVSYGNGAGVESPWNTQAGVVWTF"
BASE COUNT        10165 a        10223 c        10079 g         9807 t
ORIGIN      
        1 agcctataat tacgacataa tccttttcgc gcatagcaca tcctctggta aaaaattacc
       61 aaccctgtca atccacaaga atatagatac tgcaaagacg gtttaaacat gtgttcatat
      121 ttaaacatgt gctcatagca tgcatgtttt acgtaaagta aattaccgcc agagaggcaa
      181 aatgggcaga tttgagcagg ctcacaaaat gcgattaaat gcctgaatta caaaagcgag
      241 gaatttgtga cgggatgcac agaacgggaa caataaaaaa ggcagaaaat aatctgccct
      301 tgaggaaata accttagtgt ttgatgaacg tttcaagttt ctactgaaag ataaaaccat
      361 ttaaattcat aaaattacat tcacaaaccg gtcattctct ttgcgctcat caaatgttac
      421 agggcaggaa atttctgccc tgtaacacac cttttattac gctgctttcg ctactgcgtc
      481 cacttccgga cgtttcagga aggcataggc caaacccgcc accagcgtac cggcaataat
      541 tgctaccagg taacccagta ccggcgtaat agcgccaggg atcagcagaa caaacagacc
      601 accgtgcggt gccatcagtt tcgcaccaat cgccattgag attgcgccag tcagcgcccc
      661 acccacgata cagcacggca gcacacgcat cggatcacga gcagcaaacg gaattgcacc
      721 ttccgaaatg aagcacagtc ccaataccag agcggctttg ccaccttcct gctgcgcttt
      781 gtcgaatttg cgacgcgcca ccattgttgc cagacccatt gccagcggtg gcaccatacc
      841 tgccgccata atcgccgcca tcgggccata ggtttgagta ctcagcagac ccacaccgaa
      901 tgcgtacgct gctttgttta ccggaccgcc catgtcagta cacatcatgc caccgaggat
      961 cgcccccagc agaaccgcat tcgcagtccc catggtctgc agccagtgag tcagcccttc
     1021 gagaatgcca gcaactggtt taccgatcag gtagatcatc gccagaccga ccaccagact
     1081 ggaaattagc ggaatgatca ggatcggttt cagcgcctcc atactctgtg gcagtttcag
     1141 ttgcgtactg attaacttcg caatgtaacc agccaggaag ccagcaatta taccgccaat
     1201 aaagccagaa ccggtgctga ccgccagcat accgccaatc agacccggcg tgaggcccgg
     1261 acgatcggca atggagaagg caatataacc tgccagtacc ggcaccatca gcgcaaaggc
     1321 tgaaccaccg ccaatctgca tcagcgccgc tgccaacgta cccggctctt taaacgcttc
     1381 gataccaaaa gcaaaagaaa gcgcgataca cagaccacct gcgacgacca tcggcagcat
     1441 ataagagacg cctgtcagca agtgacggta agcgcctgca ctctctttct taccttcagt
     1501 ggtcgccgtt tgagctttgc ccgccggttc atacggcgtt gcttcagcaa ccgctttatc
     1561 cagttcctgc gcggttttct tcagcgccag accggtagag gtacgataca tcggtttacc
     1621 agcaaatttc gccagatcca cttcgatatc tgccgccaca atcaccagat ccgctgctgc
     1681 gacttcttca ggggtgattg cattgcccgc gccaacagaa ccacgggttt caactttcac
     1741 ccaccagcca cgttttttcg cttcggtttc aatggcttca gccgccataa aggtgtgtgc
     1801 tacgccagtc gggcaagcag tcaccgcaac tacgcgtttc ggaccgctgg cagcaaccgg
     1861 tgctgtcgca gcgaccggcg cagtgtaagg tttcgcatgg cctttggctt cactcaggaa
     1921 cagctcaggg tgcgcaactg cccgggaaat atcacccagc cagacatttt taccgttcag
     1981 cgcgctgtca ttcgggatgg aatcaccgag aacaatcgcc atttctgcgt cgttcggatt
     2041 gtcgatgatt tccagttttg cttttcgcgc caccgcgccc agcagggtct tcgccatata
     2101 ggcgcgtgcc tgaccgagat tagcgtcaat aatcagcagc gttttcatta tgcctctcct
     2161 gctgtcagtt aaaaggttgt aagtcgacgc gcgccatcat tgcggccaac tgcggacgat
     2221 cggtaatacc cacattgctt tgacttaccg ccagggctgc aacagctgtc gccagacgca
     2281 gtgtgtgttc actggattca cgcatcagca agccataaat caggccacca accatagaat
     2341 cccctgcgcc aacggtgctt acgacatcga ctgacggtgg tttggcgatc cattcgccgg
     2401 aggcattaac ccaaagcgcg ccttcggcac ccagtgaaat aacaacatgc gcaatacctt
     2461 gttcacgtag cgcatgtgca gcttcaatca catctttcat ttcaggcagt ttacggcctg
     2521 cccaaatttc caactcgcgg cggttaggtt tcaccagcca cggtgccgct ttcaaacctg
     2581 ctactaacgc ttcacggcta ctatcaaaga taatgcaagg acactgacta cgcaggcgag
     2641 tcatccagtc ggtgaacgct tccgggctga cgcctgacgg taagcttccg ctgacacaga
     2701 ccatatcgaa ctgaccgagc cagctcagag aatcagtcac aaagcgttcc cagtcggcgg
     2761 gggtgacttc aaaacccgag aagttgaagt cggtcacttc gccgtctttt tccgtcagct
     2821 taacgttaat tcgggtgcgc ccctgtacaa cctggaaacg gttggcaatg cccagctcgc
     2881 tgaacagttg ctgaaaacca tcctgattgt ctttacccag gaagccgcca acggtgacat
     2941 caattcccag gtcttttaat actttggcca cgttgatgcc tttacccgcc gcatgcagac
     3001 cggtggtttt caccaggttc acttcgccgc gttcaatttc cgggcagaaa ccaacaaggt
     3061 cataagccgg attaagggtg atcgtagcaa cacgtctgct cattatgcgc cctccccaag
     3121 accagcagcg atagcgtcgc caatggcttt cagcgcctgt tcagcatctg caccctgggc
     3181 ggtaaagcgt aggcgatgac ctttcttaac gccaagtgcc acaactttca tcagactacg
     3241 tccgtttgcc ggtttgccgg tgccatcaag gtttgtcacg gtaatatcac tgttaaattg
     3301 tttaatggta ttgaccagca tggtacctgg acgagcatgc aggccgtgtt cattgcgcac
     3361 cacaaactcc gcgcttaaca cgtcgtcggt cggcgcatca tcgctggtca gcagcgccag
     3421 caacgttgcc gcatctgctt tcagcaagcg gtcagcttta ttgtcgagca ataaatcagc
     3481 gagacgctta agaaccgcga tgggctgatc gtcattcatc gccacactca ccagcatggc
     3541 tgccgtttcg ccgtccacag caaaagcatt tgccgcacgg cttaccgcaa tcgcgctacg
     3601 cagattgcct tcggcgctat cgctcagcca gataccctgt ccgagattca gcggttgttc
     3661 attgatggct ttggtgacga aagtggcgtc aactgccccc gcctctttca gacgcgcagc
     3721 gttcagcgcc tgaagagtca gcagatcgct ggcgacgata tccagcgtca gcatttcgtt
     3781 gtcgagcttc agctgctcac tctgcttttc gcccatcagt aatgcgcgaa gttcttctgc
     3841 tgttgttgct gacttcagtt gttcagcaac ggaatcatcg ctcagtacgt gggtcagctg
     3901 gcgtagcagg cccagatgtt catccgagct ggcagcaata ccgattgcca cgtacgctac
     3961 ctgaccgtca ccccaggtga cgccttccgg gaactgaaat acctgaacgc cggttttcag
     4021 cacctgatcg cgggtgtcgg tagtgccgtg tggaatagca ataccattgc cgaggaacgt
     4081 tgaggtttgc tgttcgcgcg ccagcatgcc attgacgtag ccttctgcta cattaccggc
     4141 ctgcaccagc gccgcagcga cctggcgaat cgcctcttct ttgtctccgg ccttttcgcc
     4201 cggatggatg tcctgtacgg ataactggaa catagttctc ctctcttgct gaattgaaac
     4261 gattcagcct ctatgagaaa aaaagcgcca acctggctta gggttaaaga caagatcgcg
     4321 ctgaaacgtt tcaagaaagc ataatacttc tgtttcagca cgcaaggaaa gccgtaaagt
     4381 tatgagcaaa agtttgatgt gctgcacatt tttttgtcat ttttcctaat tgctgatggg
     4441 aaaatccgtt atcagcaatt tcatttcagc agcgtcagca gccaatcagc aacagtgaaa
     4501 tggcattttg attattcgtg gcgcttttga tttcgctgtc tgtttatttt ctgacaagca
     4561 gcgtaaactc cgcgtcttcc tcttccagtg atagacctgc atgcataact cccccgcagt
     4621 ctccagcgcg aaatcgtttg acctgacctc gacggcgttt ttaatcgttg cctttctcac
     4681 cggtattgcg ggtgctctgc aaaccccgac actcagtatt ttccttaccg atgaagtaca
     4741 tgcccgtccg gcgatggtgg gattcttctt taccggcagc gctgtcattg ggattctggt
     4801 aagtcagttt ctcgctgggc gctctgataa gcgcggcgat cgcaaatcgc tgattgtctt
     4861 ttgctgcctg ttaggcgtgc tggcctgcac cctttttgcc tggaatcgca actactttgt
     4921 tttgctattc gttggcgtct ttcttagcag ctttggctcg accgctaacc cgcaaatgtt
     4981 tgcccttacc cgtgaacatg ccgacaaaac cggacgtgag gcggtgatgt tcagctcttt
     5041 tttacgcgct caggtttcac tggcatgggt cattggccca ccgctggctt atgcgttagc
     5101 gatgggtttc agctttacgg taatgtatct gagcgcagcg gtagcgttta ttgtttgcgg
     5161 cgtgatggtg tggctgtttt taccgtcgat gcaaaaagag cttccgctgg cgaccggcac
     5221 ggttgaagcg ccgcgccgta accgtcgcga tacgctactg ctgtttgtca tttgtacatt
     5281 gatgtggggc tcgaacagcc tgtacatcat caacatgccg ctatttatta tcaacgaact
     5341 gcatcttccc gagaaactgg ccggtgtgat gatggggacc gccgccgggc tggaaatccc
     5401 gacgatgttg attgccggat atttcgccaa acgtctgggt aagcgtttct taatgcgcgt
     5461 tgctgccgtg ggtggcgtct gtttttacgc aggaatgctg atggcgcatt cacctgccat
     5521 tctgttgggc ttgcagctgc taaatgctat ttttattggc attctgggcg gcatcgggat
     5581 gctctatttt caggatttga tgcccggtca ggcaggttca gccaccacgc tctataccaa
     5641 cacgtcgcgc gtgggctgga tcatcgcagg atcagtggcg ggcatcgtcg ccgagatctg
     5701 gaattatcac gctgtgttct ggtttgcgat ggtgatgatt atcgccactc tgttttgctt
     5761 actgcggact aaagatgttt aagacgcggt cagcatttcc agatcgataa gccaggtcat
     5821 ggcctgctga cgcgagttac cgcacatttc agcgctggct tgtaagcctg cacagacttt
     5881 cggtcgcagt ggcgaggtga aaattttaca gcgttgctgt tcatcaagct gaatgcaggg
     5941 cgtattggcg ggcttgccat ctggcatacc gggaataggg ctgaaaattg aaggggcagt
     6001 gcaacacgcc ccgcaacccg gacggcattc catacgttgt tctcttaagg ttaaccaccg
     6061 gattgatgag cgcgcacagt accacctttt ttgcaccagc aaaagtgcga ataccacttg
     6121 cccgaaaggc ccgtcgcgag tactttgtcg cgatattttt gacattttcg actacaggaa
     6181 tttttcgatg ccaagagcga acgaaattaa aaaaggtatg gtactgaatt acaacggcaa
     6241 actgctgctg gttaaggata ttgatattca gtcgcccact gcccgcggtg ccgctacgct
     6301 gtacaaaatg cgtttttctg atgtccgtac cgggctgaaa gtagaagagc gtttcaaagg
     6361 tgatgatatc gttgacaccg tgacgctgac ccgccgttac gttgacttct cctatgtcga
     6421 tggcaacgaa tatgtcttta tggataaaga agactatacc ccgtatacct tcaccaaaga
     6481 tcagattgaa gaagagttgc tgtttatgcc agagggcggc atgccggaca tgcaggtgct
     6541 gacctgggac ggtcaactgc tggcgcttga gctgccgcag accgttgatc tggaaatcgt
     6601 tgaaaccgca ccaggcatca aaggggcatc tgccagcgcc cgtaacaaac cggcgacatt
     6661 gagcactggt ctggtgattc aggtaccaga atacttaagc ccgggcgaaa aaattcgtat
     6721 ccatatcgaa gaacgccgtt atatggggcg tgctgactaa cttcagccgc atgcagaaaa
     6781 gggatagctc aggctgcccc ttttttaatt tattatacca atcttctatt ttgcgcttcc
     6841 tgaacacctt acgccctcaa ttttcactcg ttgattgatc gccctcacac ttcatcgcat
     6901 taacaatcca gaccaatttc aattgctgtc atataacttt acactgtcat tgttaattta
     6961 tcgttactaa gacgtgactc ctatgaagac aattgcctcc gttacgctcc cgcatcatgt
     7021 acacgctcca cgctacgatc gccagcagtt gcaatcacgt atcgttcatt ttggctttgg
     7081 cgcctttcac cgcgctcatc aggcgttact gaccgatcgt gtgctgaatg cccagggcgg
     7141 cgactggggg atctgtgaaa tcagcttgtt cagcggtgat caactgatga gccagctccg
     7201 cgcacagaac catttatata ccgtgctgga gaaaggtgcg gacggcaatc aggtgataat
     7261 tgtcggtgcc gttcacgaat gccttaatgc aaaactggat tccttagcgg caattattga
     7321 gaaattttgc gagccacagg tggcaattgt ttccctgacg attaccgaaa aaggctattg
     7381 tattgacccg gccaccggtg cactcgacac cagtaatccg cggattattc acgatctaca
     7441 aacccctgaa gaacctcact ccgcaccggg tattctcgtc gaagcactga aacgccgccg
     7501 tgagcgcggc cttacaccgt ttaccgtgct ctcctgcgac aatattcccg acaatggcca
     7561 tgtggtgaaa aacgcggtgc tgggaatggc agaaaaacgt tcgccagaac tcgccgggtg
     7621 gataaaagaa cacgtcagtt ttccgggaac catggtcgac cgcattgttc cggctgcaac
     7681 cgacgaatca ctggcagaaa tcagccagca tctgggggta aatgatccct gcgcgattag
     7741 ctgcgaaccg tttatccagt gggtggtgga agataacttc gtcgctgggc gtcctgcctg
     7801 ggaagtcgca ggtgtacaaa tggtgaatga tgtcctgcca tgggaagaga tgaaactgcg
     7861 tatgcttaat ggcagccact cttttctcgc ttatctgggt tacctttcag gattcgccca
     7921 tatcagtgat tgcatgcagg atcgcgcatt tcgccatgcc gccagaacat taatgctgaa
     7981 tgagcaagcg ccgacactac aaattaaaga tgtcgattta acacaatatg cggacaagtt
     8041 aattgctcgt tttgctaatc cggcgctgaa acataagacc tggcaaatcg caatgaatgg
     8101 tagccagaaa ttaccgcaac gtatgctggc aggtattcgc atacatctgg ggcgcgaaac
     8161 ggactggtcg ttgctggcat taggcgttgc tggctggatg cgttacgtca gcggcgttga
     8221 tgatgccgga aatgccattg atgttcgcga tccgcttagc gataaaattc gcgaacttgt
     8281 tgcgggcagc agcagtgaac aacgcgtaac cgccctgctt tccctgcgtg aagttttcgg
     8341 tgatgatctg ccagataacc cgcattttgt gcaggccatc gaacaagcct ggcaacaaat
     8401 cgtacaattc ggcgcacatc aggcgctatt aaacaccctc aaaatttaac gatttctgcg
     8461 gttaaagcgg atgaagctca ccttcgtccg ctctcccctt ctcttttctg ccttttttag
     8521 ccaggattaa cgctcagtta acttaccaga gtattgcgga gccgttgtga ccaggaccaa
     8581 cctcatcacc ggttttctcg gcagcgggaa aaccacgtcg attcttcatc tgttagccca
     8641 taaagatccc aacgaaaaat ggacggtact ggttaatgaa tttggggaag tcggaattga
     8701 tggtgctttg ctcgccgata gcggcgcatt gctgaaagag atccccggcg gctgcatgtg
     8761 ctgcgttaat ggtttaccca tgcaggtagg gttgaatacc ttactgcgtc agggaaaacc
     8821 agaccgcttg ttgatagagc cgaccgggct gggccatccg aaacagatcc tcgatctgtt
     8881 aaccgcacca gtctatgaac cgtggataga tctgcgcgcc accttgtgca ttctcgatcc
     8941 acgcttgctg ctggacgaaa aaagcgccag caatgaaaac ttccgtgacc agctggctgc
     9001 cgcagacatc attgtcgcca ataaatccga ccgtgcgacg cccgaaagtg agcaagcgct
     9061 acagcgttgg tggcagcaaa atggtggcga tcgacaatta attcacagtg agcatgggaa
     9121 agttgacggt catcttctgg atttgccgcg tcgcaattta gccgagttgc ccgccagcgc
     9181 cgcgcattct catcagcatg tcgtgaaaaa agggttagca gcgttaagcc tgccagagca
     9241 tcaacgctgg cgtcgcagtc tgaacagcgg gcaaggatat caggcctgcg gctggatatt
     9301 cgacgctgat acggtattcg acaccattgg cattctggaa tgggcgcgac ttgcaccggt
     9361 ggaacgcgtc aaaggcgtgc tgcgtattcc cgaagggctg gtacgaatca accgtcaggg
     9421 cgatgacctg cacattgaaa cgcaaaacgt tgcgccaccg gacagccgta ttgagctgat
     9481 ttccagcagc gaagctgact ggaatgcctt gcagagcgcg ctgttgaagc ttcgtttagc
     9541 gactaccgcg taaggttgcc tgcgtttttc agtaagataa ttagagaaaa tatgattaaa
     9601 aatttgccgc aaatagtgtt gttgaatatt gtcggcctcg cgctgtttct ttcctggtat
     9661 attcccgtta atcatggatt atggttgccg attgatgcgg atatttttta tttctttaat
     9721 cagaaactgg tcgaaagtaa ggccttttta tggctggttg cattgaccaa caatcgcgct
     9781 ttcgacggtt gttctctgct ggcgatggga atgttgatgc tgagtttctg gctgaaagaa
     9841 aacgccccag gcagacgacg tatcgtgatt attggtctgg taatgctatt aactgcagtg
     9901 gtattaaacc agctgggtca ggcattaatt cctgtaaaac gggccagccc aacattgacg
     9961 tttactaata ttaaccgcgt cagcgaactg ctctctgtcc ccacgaaaga tgcctcacga
    10021 gatagctttc ccggcgatca cggcatgatg ctgcttattt tttcggcatt catgtggcgt
    10081 tatttcggta aagttgcagg tcttatcgcc cttattattt ttgtggtttt tgcgtttccc
    10141 agagtaatga ttggcgcaca ctggtttact gacatcattg tcggttcgat gaccgtgata
    10201 ttgatcggtt tgccctgggt gttgctgacg ccattaagtg atcgattaat cacctttttt
    10261 gacaaatcac taccgggaaa aaacaaacat ttccaaaaca aataactcac agtaattaac
    10321 atcatcaggt ttatttttat agtgaggata atcctgatga tgcgcaccgt gctttcatct
    10381 atcgaacgca aaaatcattc tctaagtaaa tgaatggatt gcatgcgttt cactcaatcg
    10441 tactttaatt gaccaatccc gcttattaac tttctgtatc actttttctt ataaaaaatc
    10501 atgtaaaacc gctcgccaag accgcaccaa tcgggtaatc tcgaactcgt tttgcctcgg
    10561 cggtagatta tcctcacagc atataatttt gtgcgttagt ccacagattt ggccttaagg
    10621 aattgtttca acatgcccag gtaattagtc tcgtgtcgct tggcattttt ttataacgat
    10681 atttgtcgtt aaggacttca agggaaaaca aacaacatgg tcaaatctca accgattttg
    10741 agatatatct tgcgcgggat tcccgcgatt gcagtagcgg ttctgctttc tgcatgtagt
    10801 gcaaataaca ccgcaaagaa tatgcatcct gagacacgtg cagtgggtag tgaaacatca
    10861 tcactgcaag cttctcagga tgaatttgaa aacctggttc gtaatgtcga cgtaaaatcg
    10921 cgaattatgg atcagtatgc tgactggaaa ggcgtacgtt atcgtctggg cggcagcact
    10981 aaaaaaggta tcgattgttc tggtttcgta cagcgtacat tccgtgagca atttggctta
    11041 gaacttccgc gttcgactta cgaacagcag gaaatgggta aatctgtttc ccgcagtaat
    11101 ttgcgtacgg gtgatttagt tctgttccgt gccggttcaa cgggacgcca tgtcggtatt
    11161 tatatcggca acaatcagtt tgtccatgct tccaccagca gtggtgttat tatttccagc
    11221 atgaatgaac cgtactggaa gaagcgttac aacgaagcac gccgagttct cagccgcagc
    11281 taataaaccg tttggatgca atcccttggc tatcctgacg agttaactga aagcactgct
    11341 taggtagtgc ttttttgttt tcattcatca gagaaaatga tgtttccgcg tcttgatcca
    11401 ggctatagtc cggtcattgt tatcttttaa atgttgtcgt aatttcagga aattaacgga
    11461 atcatgttca tacgcgctcc caattctgga cgtaagctcc tgcttacctg cattgtagca
    11521 ggcgtgatga ttgcgatact ggttagctgc cttcagtttt tagtggcctg gcataagcac
    11581 gaagtcaaat acgacacact gattatcgac gtacaaaagt atctcgatac ctattttgcc
    11641 gacctgaaat ccactactga ccggcttcag ccgctgacct tagatacctg ccagcaggct
    11701 aaccccgaac tgaccgctcg cgcggcgttt agcatgaatg tccgtacgtt tgtgctggtg
    11761 aaagataaaa aaacattctg ttcatctgcg actggtgaga tggacattcc actcaatgaa
    11821 ttgattccgg cgctcgacat taataaaaac gtcgatatgg cgatcttacc cggcacgccg
    11881 atggtgccga acaaacccgc aatcgtcatc tggtatcgca accctttgct gaaaaatagc
    11941 ggtgtgtttg ccgctctgaa tctcaacctg acgccttctc tcttttatag ttcacggcag
    12001 gaagattacg atggcgtcgc cctcattatt ggcaatactg cgctatctac cttttcttca
    12061 cgtttgatga acgttaatga attaaccgac atgcctgtcc gtgaaactaa aattgcgggc
    12121 attcctctga ccgttcggct ttatgcggat gactggacat ggaacgatgt gtggtacgca
    12181 tttttactgg gcggcatgag tggaactgtc gttggcctgc tctgctatta cctgatgagc
    12241 gtacgtatgc gccccggcag agaaatcatg accgccatca agcgcgaaca attttacgtg
    12301 gcgtatcaac cggtggtgga tacacaagct ttgcgagtaa cgggcctgga agtactgcta
    12361 cgctggcggc atcctgtcgc gggagaaatt cccccggatg ccttcattaa ctttgccgaa
    12421 tcgcaaaaga tgattgtgcc gctgactcag cacctgtttg agttaattgc ccgcgatgcc
    12481 gcagaattag aaaaagtgct gccagtaggc gtcaaatttg gtattaacat tgcgccggac
    12541 catctgcaca gcgaaagctt taaagcagat atccagaaac tgctcacttc cctgcccgca
    12601 caccatttcc agattgtgct ggaaattacc gagcgcgata tgctgaaaga gcaagaagcc
    12661 acacaactct tcgcctggct gcactcggtc ggcgtagaaa ttgctattga tgacttcggc
    12721 accgggcaca gcgcgcttat ctatcttgag cgttttacgc tcgattatct gaaaattgac
    12781 cgtggattta tcaacgccat cggtacggaa acgatcactt cacccgtact tgacgcggtg
    12841 ctgacgctgg cgaaacgcct caatatgctg acggttgctg aagggggcga aacgccggaa
    12901 caggcgcgat ggctaagcga acccggcgtt aatttcatgc aaggctactg gattagtcgc
    12961 ccgttaccgc tggacgattt tgttcgctgg ctgaagaaac cgtatacgcc gcagtggtaa
    13021 ggtgtgctta cgtcccttat tattcatagt gaaagcatgc cggattgcgg ctaatgatga
    13081 gtaaaaggaa atccgttgca gatgattgtg cgcatactgc tgctgtttat cgccctgttc
    13141 accttcggtg cgcaggcgca ggctatcaag gaaagctatg cctttgccgt gctgggcgaa
    13201 ccccggtacg catttaattt caaccatttt gattatgtga accccgccgc gccaaaaggt
    13261 gggcagataa cgttgtcagc cctcggtacc ttcgataatt tcaaccgcta tgcactgcgc
    13321 ggcaacccgg gcgcacgcac cgagcagttg tacgacacgc tatttacgac ttccgatgac
    13381 gaaccaggca gttattaccc gctgattgct gaaagtgcac gctatgctga cgattattcc
    13441 tgggtggagg tcgctattaa tccgcgcgcc cgttttcatg atggttcgcc cattactgcc
    13501 cgcgatgtag agtttacttt tcaaaaattt atgaccgaag gcgtgccgca atttcgtctg
    13561 gtctacaaag gcaccaccgt caaagccatt gcaccgttaa ccgtgcgcat tgagttagct
    13621 aaacccggca aagaagatat gctgagtctg ttttcgctgc cggtatttcc agaaaagtac
    13681 tggaaggatc acaaacttag cgacccgctc gccacgcctc cgcttgccag tggtccgtac
    13741 cgcgttacgt cctggaaaat ggggcaaaat attgtctatt cccgtgtgaa agattactgg
    13801 gcagcaaact taccggtaaa ccgtggacgc tggaatttcg acaccattcg ctacgattat
    13861 tacctcgatg ataatgtcgc ctttgaagcg tttaaagcag gtgcctttga tttgcgtatg
    13921 gaaaacgacg ctaaaaactg ggccacgcgt tataccggta aaaatttcga taaaaaatac
    13981 atcatcaaag atgagcaaaa gaacgaatca gcccaggata cgcgctggct ggcgtttaat
    14041 atccaacgtc cggtattcag cgatcgccgg gtccgggaag caatcactct cgcctttgac
    14101 tttgaatgga tgaacaaggc gttgttttac aacgcctgga gtcgcacgaa cagttatttt
    14161 cagaataccg aatacgcggc cagaaattac cccgacgccg cggagctggt gcttctggca
    14221 ccaatgaaaa aagatctacc gccagaagtc ttcacacaaa tctaccagcc gccggtatct
    14281 aaaggcgatg gctacgatcg tgacaacctg ttaaaagccg acacacttct caacgaagcg
    14341 ggctgggtgc tgaagggtca gcaacgcgtt aatgccacaa cgggtcagca actcagcttt
    14401 gaattattgc ttcccgcaag cagcaatagt cagtgggtat tgccgttcca gcacagcctg
    14461 caacggctgg gtatcaacat ggacattcgc aaggtggata actcgcaaat caccaaccgc
    14521 atgcgcagtc gcgactatga catgatgccg cgcctatggc gggcgatgcc gtggcccagt
    14581 tccgatttac agatttcctg gtcatcggaa tatatcaatt ccacttataa tgcccccggc
    14641 gtgcaaagcc cggttatcga ctcactgatc aaccaaatta ttgccgcgca gggaaataaa
    14701 gaaaaattat tgccgttggg gcgagcactg gatcgcgtat taacgtggaa ttattacatg
    14761 ctgccaatgt ggtacatggc ggaagaccgt ctcgcctggt gggataaatt ctcccacccc
    14821 gctgtacgcc ctgtttacag cctgggtatc gatacctggt ggtatgacgt taataaagcg
    14881 gccaaactgc cgtcagccag gcaacaggga gagtagatgg gcgcttacct gattcgccgt
    14941 ctgttgctgg tgatcccaac attatgggcg attatcacca tcaacttttt catcgtgcaa
    15001 attgcgcctg gcggtccggt cgaccaggcc atcgccgcca ttgagtttgg taatgccgga
    15061 gtattacccg gcgcaggcgg tgaaggtgtt cgtgccagcc atgcgcaaac gggtgtcggc
    15121 aatatcagcg acagtaatta ccgtggcgga cgcggattag atccagaagt gatcgctgag
    15181 atcactcatc gctacggttt tgataagccg atccacgaac gttacttcaa aatgctctgg
    15241 gactacatcc gctttgattt tggtgatagc ctgtttcgca gcgcctcggt gctgacgctg
    15301 attaaagaca gtctgccggt ttccatcacc ctcggattgt ggagcacgct gattatctat
    15361 ctggtgtcga ttccgttagg cattcgcaaa gctgttcata atgggagccg ctttgacgtc
    15421 tggagtagcg catttatcat tatcggctac gccattccgg cctttttgtt tgccatcctg
    15481 ctgattgtct tcttcgcggg cggcagctat ttcgacctgt tccctctacg cggcctggtt
    15541 tccgctaact ttgattcgct gccgtggtat cagaaaatca ccgattatct gtggcatatc
    15601 acgctgccgg tgctggcgac ggtgattggt ggctttgcgg cgctgaccat actgacaaaa
    15661 aactcattcc ttgatgaagt gcgcaagcaa tacgtggtga ccgcgcgtgc gaaaggggta
    15721 agtgaaaaaa atattctctg gaaacatgtg ttccgcaacg ccatgctgct ggtgattgcc
    15781 ggttttccgg cgacgtttat cagcatgttt tttaccggct cgctgctgat tgaggtgatg
    15841 ttttcactca atggtctggg cttactgggc tacgaagcga ccgtctcgcg cgattatcct
    15901 gtaatgtttg gtaccttgta tattttcacc ctgattggcc tgctgctgaa tattgtcagt
    15961 gatatcagct atacgctggt tgatccgcgt attgattttg agggacgtta atgtcgcgac
    16021 tcagccccgt caatcaggcc cgttgggcgc gttttcgtca taaccgtcgc ggctactggt
    16081 cgttatggat tttcctcgtc ttgtttggtt tgagtttgtg ttcagagctt atcgccaacg
    16141 ataaaccatt gctggtacgt tatgacggca gttggtattt cccgttgttg aaaaactaca
    16201 gcgaaagcga ttttggcggc ccgctggcaa gtcaggctga ttatcaggac ccgtggctga
    16261 aacaacggct ggaaaataac ggctgggtac tgtgggcacc gattcgcttt ggtgctacca
    16321 gtatcaactt tgctaccgat aagcccttcc cttctccacc ctcccggcaa aactggctgg
    16381 gaacggatgc caacggcggc gatgtgctgg cacgcattct ctatggcacg cggatctcgg
    16441 ttctgtttgg cctgatgctg actctctgtt ccagcgtgat gggcgtgctg gcgggggcgc
    16501 tacaaggcta ttacggcggt aaagtcgatc tctggggaca acgctttatt gaagtatggt
    16561 cggggatgcc gacgctgttt ttgattattt tactttccag cgtcgtacag cctaacttct
    16621 ggtggctgct ggcaattact gtcttgtttg gctggatgag tctggtcggc gtggtgcggg
    16681 cggagttttt acgtactcgt aatttcgact acattcgtgc ggcgcaggcg cttggcgtca
    16741 gcgatcgcag tatcatcctg cgtcatatgt tgcctaatgc catggtcgcg accctcacct
    16801 ttttaccgtt tattttatgt agttcgatca ccaccctgac ctcactcgat ttcctcggct
    16861 tcggtctgcc gctcggttca ccgtcactcg gtgaactgct gttacaaggg aaaaataacc
    16921 ttcaggctcc gtggcttggg atcaccgcct tcttgtcggt ggcgatatta ttgtctttgc
    16981 tgatctttat tggtgaagcc gtccgcgacg catttgatcc taataaggcg gtgtagcatg
    17041 acgcaaactc tgttagcgat tgaagatttg tcggtgggtt ttcgccatca gcaaaccgta
    17101 cgtacagtag tcaatgatgt ttcactacag attgaggctg gcgaaacgct ggcgctggtg
    17161 ggtgagtcag gttcaggcaa aagcgttacc gcgctgtcaa ttttacgcct gctcccttcc
    17221 ccgccggttg aatatctctc cggcgatatt cgttttcgtg gcgaatcgct gcttcatgcc
    17281 agcgatcaaa cgttgcgcgg tgtacgcggt aataagatcg ccatgatttt tcaagagccg
    17341 atggtgtcgt taaatccatt gcataccctg gaaaaacagc tttatgaagt gctttcactc
    17401 caccgcggga tgcgtcggga agcggctcga ggcgaaattc ttaactgcct tgatcgcgtt
    17461 ggtatccgcc aggcggcaaa acggctgaca gattatccgc atcagctctc cggcggcgaa
    17521 cgccagcggg tgatgattgc gatggcgctg ttaacgcgac cggaattatt aattgccgat
    17581 gaaccgacca ccgcactgga cgtctctgtc caggcgcaga ttttacagct gttgcgcgaa
    17641 ctgcaaggcg agctgaatat gggcatgctg tttattactc ataacctcag cattgtcaga
    17701 aaactggccc accgcgtggc ggtaatgcaa aacggtcgct gtgtcgagca aaattacgcc
    17761 gctacgctat ttgcctcacc cactcatcct tacacacaaa agctactcaa cagtgaaccg
    17821 tcaggcgatc cagtgccgtt gccagaacct gcctcaacgt tgctggatgt tgaacagctt
    17881 caggttgcct tccccattcg caaagggatt ttgaagcgca ttgtggatca taatgtggtg
    17941 gtgaaaaaca tcagttttac gctacgagcg ggtgaaacac tgggtttagt gggcgagtcc
    18001 ggttccggga aaagtacgac gggactggcg ctgctgcgac tgattaattc tcagggcagc
    18061 atcatctttg acggtcagcc actgcaaaat ttaaatcgcc gccagctgtt acctattcgt
    18121 catcgcattc aggtggtatt tcaggatcca aactcctcgc tcaacccacg actcaacgtt
    18181 ttgcagatta ttgaggaagg cttacgggtt caccagccga cgctttctgc cgcacaacgc
    18241 gaacaacaag tgatagccgt gatgcatgaa gtgggattag atcctgaaac acgccaccgt
    18301 tatccggcgg agttctctgg tggtcagcga caacgtattg caattgccag ggcattaatt
    18361 cttaagccct cgctgatcat acttgatgaa ccgacatcat cactcgacaa aacggtacag
    18421 gcgcaaatat tgacgctatt gaaatcattg caacaaaagc tgcaactggc ctatttgttt
    18481 atcagccacg atttgcacgt tgtccgcgcg ttatgtcatc aggttatcgt actgcgacaa
    18541 ggggaagtag tggaacaagg accgtgcgcg cgcgtgtttg ccgcaccgca gcaggagtat
    18601 acgcgtcagc tactggcgtt gagctgacgc ttaaaaagga ttgtagtttg aaaagggttc
    18661 ggcaattgcc acaccaaaat ttttcaatcg gcatgttgca gcaaactcgt cctggcgatt
    18721 tacaaacagg cacggctcac cttcacactc cagcaccgaa cacggaactt cgatgtcgct
    18781 taacgcctgg cttagtttgt acatcaccga ccatgcatta tcaccatccg ggctaagcaa
    18841 tttaagcgcc accaggctgt tgtcaccgca cggtccattt tgcggaatcg gttcaacctt
    18901 cgaacctgcg aaaccagcag accagcgaaa gttctgcggt agacgatgga cgattgagag
    18961 ttgtaatgaa gtcacttatt ttccccggaa gcacatttac ttcacaattt gtttacatca
    19021 attttaacac atcatcaaca atccgtcttt atacagatcg taaagattga tgcctcgcct
    19081 gcgtggcctc tatggctctg atttaagtaa tatctgcggg cgtggtcacg tttgcggggc
    19141 tatatgtacc cgtttctgcg atctaactca acctttttaa ctacaatgat gtgacttttt
    19201 acataaattg attttacata aaataaacat atatcggggg aatgatagat ttgtggttga
    19261 catgcatcaa caaaggaagc cttttagctt cctcgttgtg caatagatca ccgttttttc
    19321 ggtcgactgg cgtacagaca gaagagaatg gagctgcttg cgcagaatgc aattgaccaa
    19381 atcatcggcc atgcagagtt aaaggtcgca agagaaagca atgcgccaac aattgcccct
    19441 atgccaaaac ggaagattcc tgccagcgaa gatgccgttc ccgccatatg gggaaactca
    19501 tcaagaatga ccgccatcgc attggatgac accatcgaca cacagcccac aaacgccgca
    19561 acgccaacca ccagaatccc agccccagca gcgcactgat gaccatccac gctgccataa
    19621 taaattgtat ccacaacccc gagcggaaca tatttaacgc gccaatgcgg cgaacgaagc
    19681 ggctgttaaa gatggtcatc acgaacagga aaacaatgtt tagtgcaaag taataaccaa
    19741 agttttccgg cgcgacgtgg ttaatttcaa tgtagacaaa cggtccggcg ctcaggaacg
    19801 agaacattcc ggcaaagctg aaaccgctgg ccagcatata actcaggaca cgcttatgac
    19861 ggaacagcgc cgcaaagtta ccaatagtag tacgaatgtg aaaaggctgg cgacgctccg
    19921 gtggtaaggt ttctttgatc agaaagaaga tcattgccga agccagaatc gccgccacgg
    19981 cgaggatcca gaagatgtaa tgccagctca gccacaccag cacccagccg ccaactatcg
    20041 gtgccatcag cggtgcaatg gtcgtcacca gcatgacaaa cgacatcatc cgcgagaact
    20101 cttctttcgg gtagatatca cgcatcaaag cgttgataac catgctggcc gcagccgcag
    20161 ccagcccgtg gaaaaaacgc atcacaatca gctgatcgat ggtttgtgcc aacgcacacg
    20221 ccaccgcggc ggcggcaaac accagcgtac cgccgagcac caccggctta cgcccgaagc
    20281 tgtctgccat cggcccgtag attaactgcc ccaacgcaaa gcccagaata taagtactga
    20341 gggtcatctg cgtactgccc gccggtacgc caaactgcgc tgaaattacc ggtagcgcgg
    20401 gcagatacat atcaatcgac agcggcatca acatggccag caggccaagg ataaaaacaa
    20461 tagcaaacga cgaatgctgt cgggtggtca caacgggctc ctgaaagtca ttgaaaagtt
    20521 agacgacgct ggcaatttct tcttcagtta acggacgata ttcaccgggg gctaaatcag
    20581 catccagcgt aataccgcca atacgttcac gatgcagctc aaccacgtgg ttacccacgg
    20641 cggcgaacat gcgtttcacc tgatgataac gcccttcgct gatggtcaga cgaacctgcg
    20701 ttggggtaat cacttccagc accgcaggct tagtgagatc tttttcgtta tgcagctgca
    20761 cgcctttagc aaattgctct gccgtatcgt cagctacagg tgattccagt gtcaccagat
    20821 aggtcttctc gcaatgatgg cgcggagaag taatgcggtg cgaccactga ccatcatcag
    20881 tcatcagcac cagaccggtg gtatcgatat ccagacgtcc tgcggcgtgc agtttccagg
    20941 ctaccggttc atccagaaaa tagagcaccg ttgggtgatc agggtcgtcc gtggagcaaa
    21001 catagccctg aggcttattg agcatgaagt aacgtggacc atgttgctgc gccagcgggt
    21061 tgccatcgta agcgacatca tgttcaggaa gcagtttgaa cgctgcatta cgaacaattt
    21121 cgccatcgac ggtgacacga ttgccgcgga tttcacgccc ggcaatagca cggctaacgc
    21181 cgagttgctg tgcgataaat ttatcaagtc gcatgtgtgt gattttgcct gtaaaaacgg
    21241 aggtcgggca ttgacccgaa aatctgaact gttgtctgcc cagtatagcg gtctaataac
    21301 atccctcaag ggaaaaagat ccatggcata ctattagcag aataatctac ctacgcgaga
    21361 ccatgatttt tacactccgc ccatatcagc aagaagccgt ggatgccacg ctcaaccatt
    21421 ttcgtcgtca taaaacccct gccgttatcg tgctgcccac cggcgcaggt aaaagcctgg
    21481 tgattgccga actggcacgg ctggcgcgtg gtcgtgttct ggtgctggca cacgtcaaag
    21541 aactggtggc gcaaaaccat gcaaagtatc aggcgctggg gctggaagcc gatatttttg
    21601 ccgctgggtt aaagcgcaaa gagagccacg gtaaagtggt atttggcagc gtgcagtcgg
    21661 tcgctcgtaa tcttgatgcc tttcagggtg aattttcgct gttgattgtc gatgaatgcc
    21721 accgtattgg tgacgatgaa gagagccagt atcagcaaat cctcactcac ctgactaaag
    21781 tgaatcccca cttacgcctg ctggggctga ctgccacgcc ttttcgattg ggcaaaggct
    21841 ggatctacca gttccattat cacggcatgg tacgcggcga tgagaaagcc cttttccgtg
    21901 actgcattta tgagctgccg ctgcgttata tgattaaaca cggctatctg acgccgccag
    21961 aacgactgga tatgccagta gtgcaatacg atttcagccg cttgcaggca cagagtaacg
    22021 ggctgttcag cgaagctgat ctcaaccgtg agctgaaaaa acagcaacgc attacgccac
    22081 atatcatcag ccagatcatg gagttcgccg aaaagcgcaa aggggtaatg attttcgccg
    22141 ccaccgttga acacgcaaaa gagattgtgg gattactgcc tgccgaagat gcagcactga
    22201 ttactggcga cacccccggc gctgagcgcg atgtgttaat tgaagatttt aaagcccagc
    22261 gttttcgcta tctggtcaac gtcgcggtac tgaccaccgg atttgacgcc ccgcacgtcg
    22321 atcttatcgc cattctgcgt cctaccgaat cagtgagtct ttaccaacaa attgtcgggc
    22381 gcggtctgcg tctcgctcct ggcaagactg attgcttaat tcttgattat gcgggtaatc
    22441 ctcacgacct ctacgcgccg gaagttggta caccgaaagg caaaagtgac aacgtcccgg
    22501 tacaggtttt ctgccctgcc tgcggttttg ccaacacctt ttgggggaaa acgaccgccg
    22561 acgggacatt gattgaacac tttggtcgtc gctgtcaggg atggtttgaa gatgacgacg
    22621 gccatcgcga acagtgtgac ttccgtttcc gttttaaaaa ttgcccgcaa tgtaacgcgg
    22681 aaaacgatat tgccgcccgc cgctgccgcg aatgtgacac ggtactggtt gatccggatg
    22741 atatgttaaa agcggcgcta cgactgaaag acgcgctggt attacgctgt agcggcatgt
    22801 ctttacagca tgggcacgac gagaaaggcg aatggttgaa aatcacctat tacgatgaag
    22861 acggcgcgga tgtgagtgag cgtttccgtc tgcaaacgcc cgcccagcga actgccttcg
    22921 agcagctttt tatccgcccg catacgcgca caccgggcat ccctctgcgc tggatcaccg
    22981 ccgccgatat cctcgcccag caagccttac tgcgacatcc ggattttgtc gtcgcccgca
    23041 tgaaaggtca gtactggcag gtgcgtgaaa aagtgttcga ttacgaaggt cgttttcgtc
    23101 gggcgcacga attacgcggt taatggtagt tttgattgat gtataaggcg attgagtata
    23161 gaatctcgcc cgcttttgca tacgcaaagc agatcactta cctgttgctg ggtcgcctgt
    23221 agcaggatta atttaagaga gaaagaaatg tttactatca acgcagaagt acgtaaagag
    23281 cagggtaagg gtgcgagccg ccgcctgcgt gccgctaaca agttcccggc aatcatctac
    23341 ggtggcaaag aagcaccgct ggctatcgag ctggatcacg acaaagtcat gaacatgcaa
    23401 gctaaagctg aattctacag cgaagttctg gccatcgttg ttgacggtaa agaaatcaaa
    23461 gttaaagctc aggacgtaca gcgtcacccg tacaaaccga agctgcagca catcgacttc
    23521 gttcgcgctt aattgctgaa taagttgtaa aaaaccccgc tccggcgggg ttttttgtat
    23581 ctgcagatta tgcctgatta cggtattgct attttttgca ggccagataa ggcgttcacg
    23641 ccgcatctgg cattcagaat acaaaaccga ttaattgccg ccagacgtcc ggcgctgcaa
    23701 ttggtcgcgc aaattcggcg gcgtgccttt aatggtcaag gtatcggttg ctggatccca
    23761 gaagatgcgt tcacctaaca gcatcgcatc aaagttaata gtcaagccac cgccgctacc
    23821 ggcaaacttc gtcaactgac gcagtgtgct acggtctgcc gggaagctct cttccagttc
    23881 gtagcctttt tcagccgcaa acttcgtgaa gctcacttcg cttacgcctg ccagctcttt
    23941 cgacagcgat tccagttcga tctcttcgcc tgcctgcagc tgctcattac agtagctata
    24001 aacctgctgg cgcacgttct gtcgctctgc tttatccagt tgtgcttcgg cagtgaaatc
    24061 atcaaccgct tgcaacagcc cacggttttg cgctttcgcg ttcaatcctt cgctggcccc
    24121 gaggaaatcc ataaagaaat ccgccacttt gcgccctact cgccctttca ggaaagtgag
    24181 atagcgggtg gactctggat tggtttccca ttcggttaaa tcgatacgcg caacaatatc
    24241 cgcatgattg atatcaagat aatgggttgg gttgatgtcg agattttcgt taacgcgcat
    24301 actgctcagg ttgctcagaa ctgccaccag cagatactcc accgccagat aacggtagtg
    24361 gcaaaacagc acgaatccac cgtcagcaaa aggatatttc gctaattcgt cacgcaggcg
    24421 cccggttgcc gcgcggctaa atgccagaaa gtcctcttcg ccctgacgct gtaagcgcag
    24481 cgtctgcgcc agttcactct cttcgctaaa caagccgtaa gctttatttt tggcgctata
    24541 gacccgatgc agttctgcca ccatctcaac gacggtttct gtcggttcca gcaatgaatc
    24601 gcgcaacacc agctcaaggt tctgctcatc acgcttgata agctggtgca gagcaatctg
    24661 gttgatatcc agactcatga taaactctcc tttaagaccg ggcggtattc aaccaccgcc
    24721 ggttaagcga cgcaataaaa tatggcggtc attttacaga aggcagcgta acgagaatga
    24781 tttaacgcat aaaaaagcag aaaaaaaacc gttgctacgg taatatgttg ccctttcatc
    24841 aactaactga tttcgattta tgccacaaat ttcccgctac agtgatgaac aggttgaaca
    24901 attgctcgca gagctgctca acgtactgga aaaacataag gctccgaccg acctttccct
    24961 gatggtgtta ggcaacatgg tcactaacct tatcaacacc agcattgccc cggcccaacg
    25021 ccaggcaatt gccaactctt ttgcccgcgc cttacagtcc tctatcaacg aagacaaagc
    25081 gcactaaggg aaacagataa caggttatgg taactcatcg tcagcgctac cgtgaaaaag
    25141 tctcccagat ggtcagttgg gggcactggt ttgcactgtt caatattctg ctttcgctcg
    25201 tcattggcag ccgttacctg tttatcgccg actggccgac aacgcttgct ggtcgcattt
    25261 attcctacgt aagcattatc ggccatttca gcttcctggt gttcgccacc tacttgctga
    25321 tcctcttccc gctgaccttt atcgtcggct cccagaggct gatgaggttt ttgtccgtca
    25381 ttctggcaac ggcgggaatg acgctattac tgatcgatag cgaagtcttt actcgtttcc
    25441 atctccatct taatcccatc gtctggcagt tggttatcaa cccagacgaa aatgagatgg
    25501 cgcgcgactg gcagctgatg ttcatcagcg tgccggttat tttattgctt gaactggtgt
    25561 ttgcgacgtg gagctggcaa aagctgcgca gcctgacgcg tcgtcgacgc ttcgcgcgcc
    25621 cgctggccgc attcttattt atcgccttta tcgcctcgca tgtggtgtat atctgggccg
    25681 atgccaactt ctatcgcccg atcaccatgc agcgcgctaa cctgccgctt tcgtacccga
    25741 tgacggcgcg acgtttcctt gagaagcatg gcctgcttga tgcgcaggag tatcaacgcc
    25801 gtcttattga gcaaggtaat ccagacgccg tttccgtaca gtatccgtta agcgaactgc
    25861 gctatcgcga tatgggcacc gggcagaatg tgctgttgat tactgtcgat ggcctgaact
    25921 actcacgctt cgagaagcag atgcctgcgc tggcaggttt tgctgagcaa aatatttcgt
    25981 tcacgcgcca tatgagctcc ggcaacacta cagacaacgg catctttggc ctgttctatg
    26041 gcatctcgcc gagctatatg gacggcattc tgtcgacccg tacccctgcg gcgttaatta
    26101 ctgcgcttaa tcagcaaggc tatcagctgg gattattctc gtcagatggc tttaccagtc
    26161 cgctgtatcg ccaggcattg ttgtcagatt tctcgatgcc gagcgtacgc ccccaatccg
    26221 acgagcagac cgccacgcag tggatcaact ggctgggccg ctacgcacaa gaagataacc
    26281 gctggttctc gtgggtctct ttcaatggca ctaacattga cgacagcaat cagcaggcat
    26341 ttgcacggaa atatagccgg gcggcaggca atgtcgatga ccagatcaac cgcgtgctca
    26401 atgcactgct tgattctggc aaactggaca atacggttgt gattatcact gccggtcggg
    26461 gtattccgct gagcgaagac gaagaaacct ttgactggtc ccacggtcat ctgcaggtgc
    26521 cattagtgat tcactggcca ggcacgccgg cgcagcgtat taatgcgctg actgatcata
    26581 ccgatctgat gacgacgctg atgcaacgcc tgctacatgt cagcacacct gccagcgaat
    26641 attcgcaagg tcaggatttg ttcaaccctc aacgccgtca ttactgggtc actgcagcgg
    26701 ataacgatac gctggcaatt accaccccga aaaagacgct ggtgctgaac aataacggta
    26761 aataccgcac ttacaactta cgtggtgaaa gagtgaaaga tgaaaaacca cagttaagtt
    26821 tgttattgca agtgctgaca gacgagaagc gttttatcgc taactgatta attataaatc
    26881 agttagcgaa atatcttact tgcaatcggt gtggaaaacg gtagtattag cagccacgag
    26941 tcggcacgta gcgcagcctg gtagcgcacc gtcatggggt gtcgggggtc ggaggttcaa
    27001 atcctctcgt gccgaccaaa tcgcccaccg gataccaccg gaattaacag tttttagaca
    27061 cgaaaagccc gctaatcctt gattagcggg tttttttatg gtttttagtc accggacatc
    27121 accggattta taagctatca gccggatttt ttagttatac gcttagttat acgggcttgc
    27181 gtataactaa agccgtataa ctaaaaccct gttttttcgt gtggaatcat atacatatgg
    27241 cgagaaaaac acccccatta accacggtgc agatcaaagc agccagacca gcggaaaagg
    27301 aatacaccct acaggacggc ggagggcttt ttctcctggt caaaccgtcc ggatcaaaac
    27361 tctggcgatt ttcctactac cggccatcgg acaaaaaaag aatattgctg agttttggat
    27421 cgcttgatga tgtttccctg gctgatgcca gaaaacgccg tagcgagtac agagcgttaa
    27481 tcagtgccgg aactgacccg cagggccatg agaagaaaaa acgagaggca gaggcccgaa
    27541 gacaagggaa cacgttcgaa aatgtggcgg cggcatggta ccaggtgaaa atcagccaga
    27601 atctggcccc caacacgatt aaagacatct ggcgttcgct ggataaatat gtattcccgt
    27661 tcatcggcaa cacgccaata gataccctca ccgcccgaag gttcgttgaa gtgcttacac
    27721 ccatcaagga gcgcggcaac ctggaaacac tcaagcgggt tttacagcgc gttaatgagg
    27781 taatggatta cgccgccaac agtgggctga ttgatgccaa tccggctatg aatgtgcgta
    27841 aggcgtttcc ctcacctgta aaaaaacata tgccaacaat ccgccccgaa cagctgccgg
    27901 agcttatgca ggctttatca gtatcggcaa cagaacggca gaccagatta ctgattgaat
    27961 ggcagttact gaccgtaacc cgtcccgccg aagcgtcatc aacgcggtgg gatgaaatca
    28021 acctggacgc gaagcaatgg acgatacctg ccggacgcat gaagatgcgc agggatcacg
    28081 ttatcccgct ttccggtcag gctatggcgg tgctggaggc catgaaacca atcagccacc
    28141 accgcaatta cgttttccca agtctgaaag acccacagca gccgatgaac agccagacag
    28201 ctaacgcagc attgcggcgt atgggattcg ctggcgtgct ggtgtctcat ggattacgcg
    28261 ccatattcag cacagcagcg aacgaggaag gattcgagcc ggacgtaata gaggcggcac
    28321 ttgcccacgt cgacaccaac gaagttagac gggcatacaa ccggagcaac tacatagaaa
    28381 aacgcatcgt gctgatgcgc tggtggggcg aatttgtcga ggctgcggcg acgggcgtaa
    28441 ccctcgccag tggtaaaagg ggtatccgag ccgtgtagct gtacagaaaa ccagtaaaaa
    28501 ctacgaaaac catgtaaaac cgtcgtataa ttgcatcaaa tttaacgaca aggccgtgaa
    28561 acatgaaacc gttaagatgc aaaaaaatat cagatgcaat tgcgacgggc tgcaactggc
    28621 cctgatggtt cagcatgaat tttggtcaac ctacgatccg gaggacagaa cgacggcccc
    28681 atcaaaaaaa caggtagtag attttctggt atcccgtggc gcttccagaa atctggcggt
    28741 aagtattgat aaggtcgtac gtccggcatc tatgaagatc ggaggcaggc ccaaaaaatg
    28801 gcggtaacaa tcctggaagc ggcagaaatg ccgctttttt tataattcca tttcaaatca
    28861 tcaatataaa aacggtgtat accgtttaaa aacggtggga actgttttta cccatatccg
    28921 atgatttacc gtatttgtca ccggaataca ccggattcac aaggtaaatc acgatggaag
    28981 caatcagaaa aattatcttt cgccaggaag taaaaaaaat tatccacatc aaggcagaca
    29041 gcacgctgca aagcatgatc aacgccggag aatttccgca gggttttcgc gttggtttac
    29101 gccgtcgcgg atggtatgag gatgatgtgt tggcctggca gaaagaacgc gaacaggaag
    29161 cacgcggaac ggctgcttaa cgggtatcac agatatgaca aacacgaaaa aagcggcccc
    29221 gatatggagc cgcctttctg aacaattaac ccgctgcgcc ttatgtgtat atgatcccaa
    29281 acataagcac ggggatgata gccgctatca ggctggtggg caatgcaatc agtctggttc
    29341 agttcgttgc catacctgca atgagcgctt ttccctatac tctttaagga attgctcaag
    29401 ggcaaaagca catggtgcga atctttctga ttcatgctct atctttctgc gccgtctttt
    29461 ccgtgccggt gataatgttt tggtcaattc tttatcggtc attgtgttgt cctgcatagc
    29521 aatgcgccgt aatacctcac accacggcgc tgatagtttt tatcctttgg gttctatgcc
    29581 gcgccgcttt agttcagtgc gccccaactc tttaagccag ttggctaggc ttatgccgtc
    29641 gctctgtgct tctttgtcga attgctcttt tagctctgga gaaattcgca ttctgaattg
    29701 tggggattgc ccgtcccctt tagggctttt atcgcgtttg attattgaca agtggtcacc
    29761 tattgaatta gcctttccat tgttaggtgg ccaccttaac acaagagcac ttaaaaaagc
    29821 aaagccccgc aagtgtcatt accactcgca gggcttctaa ccaacaacgt aaactaggag
    29881 ccgttatggt tgccgtaaat catataccac accttgtaca cacacaaacg gcctttgtgt
    29941 ggcgttttct ggccctgagt gccggagaat ctcaaatcat ccacgtaacc gcctggacgg
    30001 aacgcgaagc gcgtagccgt tgcccgtccg gttgtgttgc tgtattcgcc gcccgtattc
    30061 gtcaggggga aacctatgca caataaaacc acaccgaacg cagcagccgc cgcactcact
    30121 acgctgatgc acgcgcttat tgatattgaa tgcactgcag agcttgcgca gggagaagaa
    30181 cagaaagacc ggacacagtt cgccctggaa tgtatccgat acatcgcaac gcggtcgctg
    30241 aatgacgcta aaaatattct tgttgctgat tgtgaaaatg gggggggtta tgcgtgatga
    30301 tcgttttaat tccctgaaac aggaatttcc cggcgttcct gatgatgcgg ctgatgcgct
    30361 ttcgtcaatg ccagaactta ttagagcggc ttttttctta ctttccacga gagaatataa
    30421 atcaacgggg cttgatgtac tgaatatcgc cgccgattat gcggaatatg tggcagaggc
    30481 gcgttacaga agaaaatttc ctgaggatgt aagccatgcg tgatatttac cacgaaacaa
    30541 tagaccgcgc atttcttgca ctttctcaca gtgaaaacat gctggaaata ttgcgcatat
    30601 ggcttgaaac acttggcgac aatgaacgcg acaaacaaaa atcaagaatt gccacggcat
    30661 taataacgct tcttgagcct gtaataatgg aactgcaaga aatagatcta ttgcacgaca
    30721 gatataaaga acagcacacc ggagaataaa aataatgaaa cttaaatatt ctggcttaac
    30781 tgccagtggc aacactcacc ctaaatttac gcgcggtgat atttaccgcg accagtacgg
    30841 cggcacggta atgattaagg gcgtggaaga acggcgtgta acctaccgcc gtgaaggtta
    30901 cgaatatgat tgcgtgatgc ctgtttatca gttccggcgt gatttttctc tggtacagac
    30961 cgcgccgcat aacgtgccca ccagcaacgc cagggcacgg gcaaacatcc agaagctgaa
    31021 aaccatgatt aacggattca ggggcaagaa atgaaaagcg caccgaactt aaaaaaacag
    31081 ccttacgaca agatgaccga agtcattatt tttgcgggta gtgatgcctg ggcacatgca
    31141 aaacagtggc aggaacagga cgggcgactg gctggcgata atgtgcctcc cgttgtgctg
    31201 gctgatgatc aactggatga actggcagac ctgagaatca tcgacgaggg gcgctattgt
    31261 gtccggctgt acaaggcagg ccacatcagg ccatcaaata ttaatgccat tgcgcacaag
    31321 ctggcggcgg cgggtgtaac tgatgcgaat tattaccccg aagggatgca cagccatatg
    31381 cgggagaact ggcgcgaata cctggaacgg gtgcgcggga aagagccggt ggaagaaaaa
    31441 aaccaccagc gaaaaaccac gctaccgatg agcgttggat ctaccggata cgacacgcaa
    31501 ctggattacg tggttaaggg gattattccg gcggtatcgc tatgcagcat atacggggct
    31561 agcgggtcct ataaatcatt ccttgccgga tcgtgggcgt gccatgttgc cactggtcgc
    31621 cagtggggag gccgcagggt tgcacatggt gcggttctct atgtggttgg tgaaggcggt
    31681 atcggcgttc cgcgtcgtgt aaaagcctgg gaggttgtgc acgatgagca ggtgaaaaat
    31741 ctgtatctgg taaaccgccc catctttccg gctgccccgc ttgatgttga tgaaatggtt
    31801 atcgctgccc gtcaggtgga gcgggaaacg ggtaaacctg tacgcatgat tattctggat
    31861 acgctggcgc gttgctttgg tgggaatgat gaaaatgatt cccgtgatat gggggcgttt
    31921 atccgtggtt gtgacgaact gaaacgacgc acaggggcca cggtgctggt ggttcaccat
    31981 tccggcaagg atgagacgaa aggcgcgcgc ggttccagtg catttcgtgc ttcgctggat
    32041 gctgaatacc ggatacgcag ggaggacgca ggaagcaaag cgctggttat ctcatgcacc
    32101 aaaatgaagg acgcggagga actcaaagaa gccgcatatg acttacgcgt ggtggagctt
    32161 tttaccgacg ctgacggtga attaatcacg tcgctggtgg tggtggatga tccgcgccct
    32221 cctgttgaac tggagcgcat cgaggaggca gggaacaaga cggaaaacca taccgcgcta
    32281 tgggggtgca tccgttcacg cacacagaac ggcgacaagt gcacgatccc gctgttacgt
    32341 gatgacatga aaaagctggg gtatgaaatg aaaaacttcc ggcgctggct gtacaagctg
    32401 gaaaaagatg gggttattag tatcgatggg gatgatgtag cgccgctata aaagtgagga
    32461 gcaaaagcga gggggataga aagagggcca aaattagccc gctctccctc acttttcgac
    32521 ctgtatacat cctcaaaagt gaggggtaaa aaaatactta taaaacacac acatagaaaa
    32581 accgaaaatc ccaactgcga cgaagtgaga cgcttgaaaa agtgaggcga aaaagtgaga
    32641 ggttgcgaga aatgacccaa aaacgcagag acagaacaga gccaaaatat aaagcgttag
    32701 acatgactga gcacacctta aaggtggcaa tcagaacgat agaccgccac acgcgggaag
    32761 gatacgcgaa ggaacatccc gacctgataa gcgcattcat gaccacggcg gcggcaaact
    32821 ttgccacgct gacagaacgg gagattgccg aagcggaaca ggtaacaacc atcaacgtta
    32881 aaaccggaga ggtggaatta tgacggcaca gatagccgct tacgggcggc tggtggacga
    32941 cccgcaggta aaacagacca gcaagggcac accgatgacg ctggcgcgta tggcggtatc
    33001 tttgccatgc agccaggcac aggacggaca ggcgacgtta tggttatcgg tcatcgcatt
    33061 tggcaaacag gccgacttcc tggctaaaca tcaaaaaggc gatgttgcca gcgtatccgg
    33121 cacgatgcag gtaagccagt ggaccggaca gaacggagaa acgcggcagg gctggcaggt
    33181 tatcgcagac agcgtaatca gtgcccgcgc ggcacgtcca ggcgggaaca gacgcaaaac
    33241 cacaggcaca cagggtaatc agccaccagc gggaggcgat gacccttacg gtgatgatat
    33301 ttcgttctga gggggtgacg atggtacatg accgcatagc ggaggaactg gaggcgaaag
    33361 gcttttaccg gagggcggcg gcgcgatggg gtgaagtcat gcagctggtg gagacagaca
    33421 aggaacggca tcacatcacg atgcgacggc tggaatgttc aaggaaggca cagagggcac
    33481 cggagccgcc ggataatttc ggagacctga aaaaggcagt cgatcgcact tatgccgaaa
    33541 tgggtataga tggtgctggt gatgaaatat ggcgcaatta ccaggacagc taatcaaaca
    33601 gccggagaaa tccggctttt ttgcaccagt tgaaacggta tggcgcatta ccgggttttc
    33661 gtcacggtca ggcatagtta ctatctgaaa caaacagaca caacagagga aaaaaacaat
    33721 gccgatgaaa tttgatgaga tattaaaaca gcgtgataaa taccatgctg acaacatgga
    33781 gacgatgagc atcaatgatt accgcgcatt cctggagacg ggcgcactga ttgaaaagga
    33841 tcagcatggt tttgtgagat gtgctctatc cggtgaaatg ctggcggtaa atcctgaaca
    33901 gatagatgca ttgatagaat ttctgaaaga gatcagagac tgatccagca cacagcacac
    33961 atagccggag caatccggct tttttgcgcc caaaaaaagc ccgataaggt cagagggttc
    34021 ttatcgggct tttgcatatg aggtttttgg atgcactggc gttcgtgatc gggataatca
    34081 tttcataatt tgcaacataa ctcaatattt ttgcataaaa tgcaattctg attataatca
    34141 ggactggata aacatccagt cctgattttt ttagtcgaag aggaatttct tactatggct
    34201 gaagagaaaa aaggcggtgt ttcggtgtac ataagccccg aaatcgtgga ggtgctcaag
    34261 cagcgccaca aaaaaaacta tgaggctggc gtggcggctg gactggatcc gctgatgacg
    34321 ccggagccgt cgataggttc acttgtacgc tcttatttac ttgcggcgct tgggatgcat
    34381 aaaaattatg ggggtgaata atggcaggca aagcaacggc acttaacact aaccagcttt
    34441 ttatgtacct gaatcgcggg gatattgcgg attttaaatt cagccctctg tttaccacgc
    34501 tgtttttccc gaacgtggcg acattcagca cgcaaaacat catgctggat accctggaca
    34561 ttgaagaagt caccatgtcg gcgttttgtt cgcctatggt gggtagccag gttcagcgcg
    34621 ataaagggta cgaaaccagc acaatcaaac ctggctacat gaagccaaag cacgaaatcg
    34681 atccaacgaa aaccatcatg cgcatggctg gagaagatcc ggcacagctt aacgacccta
    34741 cctatcgccg tatgcgcctg attactggca acatgcgccg ccagataaac gccattaagg
    34801 cacgcgtgga atggctggcg gtgaatgcgg taacgaccgg aaaaaacatc attgagggcg
    34861 aaggcataga acgctatgaa atcgactgga agataccgga aaaaaacatc atagagcagt
    34921 ccgacggcaa aaaatggtcc gagcatgata aagatattta cgatccaatc tatgacatcg
    34981 aactatacgc agatcaggca ggttgccccg ccaacgtcat gattatgggc gctgaggtat
    35041 ggcgcacgtt acgcagcttt aaaaaattcc gtgaactgta cgatctttcc cgtggttcag
    35101 aatccgccgc agaaatggcc tgtaaaaacc tgggcgaagt ggtgagcttt aaaggctatc
    35161 tgggcgatat tgctcttatt gtctattccg gcaaatacac tgacagcgac ggcaccgaaa
    35221 aatatttcct tgagcctgat ttgctggtcc tgggcaacac caacaataaa gggctggtgg
    35281 cctatggtgc gattatggat caggaagcgg taagaacggg cgcaacgcaa aacatgtact
    35341 acccgaaaaa ctggattgag gacggcgatc cggcgattga gtacgtgcag acacacagcg
    35401 caccgcagcc ggttccggca gatattcgca aatttgttac cgtcaaaatt ggttaacggg
    35461 ggattatatg gacactccat atattgagtt atttgcaggc agtcagcagg tatcaacgac
    35521 actggtacat tttgccgctg atgctggcgt tattcaggaa tttaccccgc tgatgctggt
    35581 ggacaatggc gagtttaagc cgtgggatgg tcaggaatct ggcaaggctg tttatctgac
    35641 ttcgtacctc gtggacacgt caaagcagaa atcagcacag tgttacaaga cggggatatt
    35701 caatattgcc gccgttaact ggcctgagag cgtcgacacc gatgcgaaaa aatgcgccgc
    35761 ctttgcgggt tctggcgtat ccgttcagcc gctggcccga taagcagggg gaacgatggc
    35821 aacgaatgaa agcatcatgg cgctaccgct ggcgagtaaa tttaaagccg aagcgcgggc
    35881 aatggctgac agaggtttat caacctacga ggccgtatat caactcaaca aactggaaga
    35941 gcaggacaag ccgcgcgctg atgcgattat ggcgcttcat gagcataaag actatcagcc
    36001 gctgttgcgt gcaatggcaa acgtgccttg tatcgatgtt gatacggcta aaaacatcct
    36061 gaacatgacc atagagcagg aacgcccgaa ggttgcacca gagcttaccg cagcctttga
    36121 aaactttatg gacatgcaca gcccacaaac cgtatcagct ggcatggcat acgatggcag
    36181 aaacccaggc gatgacggcg acatcgatcg catactgaaa accatctgag acaaggccgg
    36241 agaaatccgg cttttttgcg ggtccttcct ggaattatgg cccgttacgg ggcggcgacc
    36301 tcgcgggttt tcgctattta tgacgttttt ccgtgaaggt gacaccacca ccacttgatt
    36361 aatatttaac catgcagtta aggtaacatt atgattgata aagcttgttt tgtaagtcag
    36421 caggaaatag ctgaacattt caaggttaac agaaccacta ttcgcgcatg gaccaaacag
    36481 gggatgccgt atcttaatgc ggatcgcgga aagtctggcg gttatcacat cgggcataca
    36541 ttgctttggt cttcaggtaa aagccgtctt gaggccatca gatatcacgt agaaaccagt
    36601 gcgctggaaa aaattatgtt tgccaggctg ctttcatctg agcgtgacga gtactccagt
    36661 gaagaaacag aacatcgatt tgatgaaggt ttgcagattt acggctattc accggaagat
    36721 gtgagcaagg cacgaaataa aatggctggc tttctggctg ggtggcgtca tgccgtaagc
    36781 gttcgccgtg ccagcatgga gcaatcagcc gatacagaac agtaaagccg ataacttgtt
    36841 aatcactcgc agcaatgcat gtgatttgtg cacactttcg gttaactggt tcgatgtccg
    36901 gttttagtgt ctgttttttg cgcatgtccg gttcatggaa agcatgtttt tatatttttc
    36961 atatggttaa cttgtagaga aaccggacat ggatcccgaa aaattttcat aaatagtgaa
    37021 aacgcgcgag gtcgccgccc cgtaacgggt ccataattcc aggaaggacc cgacgacacc
    37081 agacaatcag aacgataggt gcacaatgac agaagccgaa atactgggat taatccgccg
    37141 tgctggtgga atcagccagc agactgacga acaggccacg cagccggaca gcgtgacagc
    37201 cgaaaattat gcgcgtgttg ttgctgaggt gatgcgccgt gatggtatcc agcttaatga
    37261 tgtggatatg cgcaacatac ggatccgcgt tcttgaaatg ctggcctaca atcgccgcgt
    37321 ggcactgtat cgggaaacgg agaaaattac ataccactgg aagaagccgg agcggttgcg
    37381 gcggtaactg gttgatattt tcgaaattcg ccagcggcga acatcgggga aaccagccta
    37441 acccgttgat attttcggga acctcaaatt gaggaggtcg gaaacataac ccgtcatatt
    37501 ctggatgctg ataattacca cgcagcccat taaggcctaa cccgttgatt ctttcggaaa
    37561 cagccattgg cgtaatccgg cgcggtaact tgctgaactt aaagcaaagc gcaaaattgc
    37621 gctggctggt gggcatgatg ccgatatggt gatccccata acggaaatat ccaccagcac
    37681 ggcaacggca gaatagccac aacacagaaa aaccacgaat atggggtttt tgttatggca
    37741 tgggcatgat gaccgcccct gctctgaatg gtggaaatca ccacgcagat catccaccag
    37801 cttcgttttt ataaattaaa catccgggaa aatccgaccc tgaattgtgc attttttcag
    37861 caaatcattt tagttatacg tttggttata cggtttaaaa gttgaatcat atacattatt
    37921 ttaaatcatg aagttacacg ctcaattaaa ctactctcgt gaaaaatccc aagaaaaaac
    37981 caacctttac ggttggtttt tttatatctg caattaattt gataaacaga ccgtgacaca
    38041 tcacagcctg tttattttct gttatcagaa cgtccagacc actcccgcct gagtattcca
    38101 cggcgattct acccctgcgc cattgccata gctgactgac aaatgaccgc ttaacgtcgg
    38161 ggtaaacgat gaccttatcc cagcctgata aacgccaggg gttccagcca catcattatt
    38221 aaatttgcca tcgtcattaa ctttcacatg gttagaatcg gcgtattcct gacgtacggc
    38281 ggctttcagc cagggttcca gcgtcgtacc attttgcagg tccatgtgat agcttaccgc
    38341 cgttcccgct tcagcgcgta atatccgggt atttcccaca tcagcgcgca tgccgtttga
    38401 taacgtgtag tcctgaccat ctgtggtaaa gccggtaaag gccagatagg gtctaacact
    38461 ccacaatccg tcaacccaac ggaacccgct ctcaacatga gcacccgcgc cgttactatt
    38521 gtaatcgcca aacgctgttg ccccattact catcttgcca tggatggtgt tggcaaaacg
    38581 gtcaactttc accaccccat caacataggc accgttctga tgctcccaac cggcataagc
    38641 ccccagggta tagctatcga tattaccttt tccgccgcga tcaaaaccaa tatcagaatg
    38701 agagtaacca aagaacaagc cgcgaattgt actgctttct tcacgggaga aacggctatc
    38761 gataccgagc gtcaggcccg tcaatgtttg ctcaaaacca gctcccgcat cagtggtcac
    38821 gttgttgcgg gtgttaattg ccgaactcca catcgccgta tcgtaactaa cgctttttac
    38881 gctaccaaga cgctcacgca cggtgtccag ttctgcatca aataccagcg gttgtgcggc
    38941 cgccatattc agcacatcag tggttgaagg ggtaatttgc gcgcgattct ctgccaaact
    39001 ccagctatgg ttgccattat ccagcaaggt atattcatac gtaccgatat caacaacgcc
    39061 tccggcattg cccaacgtaa atgcagcatc accgccgccc gttgttacca gtgtaaggct
    39121 atctcctgct gccgggctgg caccggtgtc cgtcacgaat attttgaaat cacctgttgc
    39181 ctgaccggtg acgttgagct gatcgctctg atgattagcc atatcggtac gcatataaaa
    39241 attgccgttt cccgacaggg tattggtggt caacgtaatg aaattttccg cacttgccgt
    39301 cactgatgaa cgagtcactg gctcatccat cataatcaca tttgcgtcag acatcgcaag
    39361 gttggctaag ttgaggaggg tgttttggtt cgtcgtagtg atatcggcaa tgatggccca
    39421 tacgctattt tcgagcgaaa cgtccgcttt gctggtatcc acggcaccat gcgttctaaa
    39481 agaagcgccc tcagaaacca ctaccttacc caccaacata gcgggtgcat aatttatttg
    39541 cggcttcatg acctcaagaa tgccatcatt ccctctgact gacacgttaa ccattgtgcc
    39601 agcccagaca ttagcgcggc cattgttgat aaccatattt tcagagatgg ctttagagga
    39661 atacgtgata cttccattct ggtctgatcg accgagatca tataccgcat ttgcctgcac
    39721 tttcgtacca gtatcctttc ccagcgattg catagtggca tgctcatcaa ggatagtatc
    39781 aatggcctgc gtgtcctcca taacaatgag cccggaacca tcatccagtt cataattttt
    39841 tgacacacca tcttttatac taaattggcc tttactgttt gtaccactca cttccagcgc
    39901 attcgttgag acaattaatt ttccgcctgc ttttttatca acgccagttg cagtcccgcc
    39961 atccataacc tccagtaagc cgccactatc tacagtagta ttataagcga agtcattttc
    40021 ttcaactcgc aaacttccgc cgttttccaa cagcatattg ttagcaatac cattcttgat
    40081 ttcgaactga ccgagacggt ttattccgaa tgcctccatg acccgcgtgc ttgctttaat
    40141 agcaccgcct gctttctgat ctaccgcaat cgctaatccc ccctctttaa cctccagtaa
    40201 tcctcccttt tcgatagcgg caaggacggt aatcccatct ttttcaacga ttaagcgccc
    40261 gcctttaatc gtgg
//
LOCUS       DADMJE010000014        39730 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.014, whole genome shotgun sequence.
ACCESSION   DADMJE010000014 DADMJE010000000
VERSION     DADMJE010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39730
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.014"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            7..438
                     /locus_tag="JN001_000707"
     CDS             7..438
                     /locus_tag="JN001_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052033.1"
                     /translation="MALNLASGEGNFFIRPGGVFYVAGDKVGIIRLDAFKTSKEIQFA
                     VQSGPMLLENGVINPRIHPNVASRKIRNGVGINKQGNAVFLLSQQATNFYDFACYAKA
                     KLNVEQLLYLDGTISHMYMKGGAIPWQRYPFVTMISVERKG"
     gene            521..1423
                     /locus_tag="JN001_000708"
     CDS             521..1423
                     /locus_tag="JN001_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HAY9052034.1"
                     /translation="MKKTLATLFLLTCLGSSSAYADNALILQTDFSLKDGAVSAMKGV
                     AFGVDHNLKIFDLTHEIPPYNIWEGAYRLYQTASYWPQGSVFVSVVDPGVGTDRKSVV
                     LKTKSGQYFVSPDNGTLTLVAQTLGIDSVREIDEKANRLKGSEKSYTFHGRDVYAYTG
                     ARLASGAITFEQVGPELPAKVVELSYQKAKATKGEVKGNIPILDIQYGNVWSNISDEL
                     LNQAEIKLNDTLCVTISEGSQQKYAGKMPYVASFGDVPEGQPMVYLNSLLNVSVALNM
                     DNFAQKHQVASGADWNIDVKKCAK"
     gene            complement(1468..3630)
                     /gene="uvrD"
                     /locus_tag="JN001_000709"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
     CDS             complement(1468..3630)
                     /gene="uvrD"
                     /locus_tag="JN001_000709"
                     /gene_synonym="mutU"
                     /gene_synonym="recL"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase II"
                     /protein_id="HAY9052035.1"
                     /translation="MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIA
                     WLMSVENCLPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHH
                     MDANLPQDFQILDSEDQLRLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQ
                     SYGNPVEQTWQKVYQAYQEASDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNIL
                     VDEFQDTNNIQYAWIRLLAGDTGKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAET
                     IRLEQNYRSTSNILSAANALIENNNGRLGKKLWTDGADGEPISLYCAFNELDEARFVV
                     NRIKTWQDNGGALAECAILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDAL
                     SYLRLIANRNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQACRELLQEKAL
                     AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGEKGQTRIEN
                     LEELVTATRQFSYNEEDEDLMPLQAFLSHAALEAGEGQADTWQDAVQLMTMHSAKGLE
                     FPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAYVGVTRAMQKLTLTYAETRRLYGKE
                     VYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMGTPMVENDSGYKLGQRVRHAKFG
                     EGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV"
     gene            complement(3714..4430)
                     /gene="yigB"
                     /locus_tag="JN001_000710"
     CDS             complement(3714..4430)
                     /gene="yigB"
                     /locus_tag="JN001_000710"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase YigB"
                     /protein_id="HAY9052036.1"
                     /translation="MRFYRPLGRISALTFDLDDTLYDNRPVILRTEREALTFVQNYHP
                     ALRSFQNEDLQRLRQAVREAEPEIYHDVTRWRFRSIEQAMLDAGLSAEEASAGAHAAM
                     INFAKWRSRIDVPQQTHDTLKQLAKKWPLVAITNGNAQPELFGLGDYFEFVLRAGPHG
                     RSKPFSDMYFLAAEKLNVPIGEILHVGDDLTTDVGGAIRSGMQACWIRPENGDLMQTW
                     DSRLLPHLEISRLASLTSLI"
     gene            complement(4430..5326)
                     /gene="xerC"
                     /locus_tag="JN001_000711"
     CDS             complement(4430..5326)
                     /gene="xerC"
                     /locus_tag="JN001_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HAY9052037.1"
                     /translation="MTDLHTDVERYLRYLSVERQLSPITLLNYQRQLEAIINFASENG
                     LQSWQQCDVTMVRNFAVRSRRKGLGAASLALRLSALRSFFDWLVSQNELKANPAKGVS
                     APKAPRHLPKNIDVDDMNRLLDIDINDPLAVRDRAMLEVMYGAGLRLSELVGLDIKHL
                     DLESGEVWVMGKGSKERRLPIGRNAVAWIEHWLDLRDLFGSEDDALFLSKLGKRISAR
                     NVQKRFAEWGIKQGLNNHVHPHKLRHSFATHMLESSGDLRGVQELLGHANLSTTQIYT
                     HLDFQHLASVYDAAHPRAKRGK"
     gene            complement(5323..6030)
                     /locus_tag="JN001_000712"
     CDS             complement(5323..6030)
                     /locus_tag="JN001_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF484 domain-containing protein"
                     /protein_id="HAY9052038.1"
                     /translation="MKQPGEELQETLTELDDRAVVDYLIKNPEFFIRNARAVEAIRVP
                     HPVRGTVSLVEWHMARARNHIHVLEENMALLMEQAIANEGLFYRLLYLQRSLTAASSL
                     DDMLMRFHRWARDLGLAGASLRLFPDRWRLGAPSNHTHLALSRQSFEPLRIQRLGQEQ
                     HYLGPLNGPELLVVLPEAKAVGSVAMSMLGSDADLGVVLFTSRDASHYQQGQGTQLLH
                     EIALMLPELLERWIERV"
     gene            complement(6027..6851)
                     /gene="dapF"
                     /locus_tag="JN001_000713"
     CDS             complement(6027..6851)
                     /gene="dapF"
                     /locus_tag="JN001_000713"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HAY9052039.1"
                     /translation="MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLADRHLGVGFDQ
                     LLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTANG
                     RMVLTVTDDDLVRVNMGEPNFEPSAVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHC
                     VIQVDDVDTAAVETLGPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACG
                     SGACAAVAVGIQQGLLAEEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL"
     gene            complement(6896..7090)
                     /locus_tag="JN001_000714"
     CDS             complement(6896..7090)
                     /locus_tag="JN001_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004987677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9052040.1"
                     /translation="MKNVFKVLTVLLTLFSLTGCGLKGPLYFPPADKNAPPPTKPVET
                     QTQSTVPDKNDRATGMVHPR"
     gene            7553..7873
                     /gene="cyaY"
                     /locus_tag="JN001_000715"
     CDS             7553..7873
                     /gene="cyaY"
                     /locus_tag="JN001_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000999950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron donor protein CyaY"
                     /protein_id="HAY9052041.1"
                     /translation="MNDSEFHRLADQLWLTIEEHLDDWDGDSDIDCEINGGVLTITFE
                     NGSKIIINRQEPLHQVWLATKQGGYHFDLKGDEWICDRSGETFWDLLEQAATQQAGET
                     VSFR"
     gene            complement(7913..10459)
                     /gene="cyaA"
                     /locus_tag="JN001_000716"
     CDS             complement(7913..10459)
                     /gene="cyaA"
                     /locus_tag="JN001_000716"
                     /EC_number="4.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate cyclase"
                     /protein_id="HAY9052042.1"
                     /translation="MYLYIETLKQRLDAINQLRVDRALAAMGPAFQQVYSLLPTLLHY
                     HHPLMPGYLDGNVPKGICLYTPDETQRHYLNELELYRGMSVQDPPKGELPITGVYTMG
                     STSSVGQSCSSDLDIWVCHQSWLDSEERQLLQRKCSLLESWAASLGVEVSFFLIDENR
                     FRHNESGSLGGEDCGSTQHILLLDEFYRTAVRLAGKRILWNMVPCDEEEHYDDYVMTL
                     YAQGVLTPNEWLDLGGLSSLSAEEYFGASLWQLYKSIDSPYKAVLKTLLLEAYSWEYP
                     NPRLLAKDIKQRLHDGEIVSFGLDPYCMMLERVTEYLTAIEDFTRLDLVRRCFYLKVC
                     EKLSRERACVGWRRAVLSQLVSEWGWDEARLAMLDNRANWKIDQVREAHNELLDAMMQ
                     SYRNLIRFARRNNLSVSASPQDIGVLTRKLYAAFEALPGKVTLVNPQISPDLSEPNLT
                     FIYVPPGRANRSGWYLYNRAPNIESIISHQPLEYNRYLNKLVAWAWFNGLLTSRTRLY
                     IKGNGIVDLPKLQEMVADVSHHFPLRLPAPTPKALYSPCEIRHLAIIVNLEYDPTAAF
                     RNQVVHFDFRKLDVFSFGENQNCLVGSVDLLYRNSWNEVRTLHFNGEQSMIEALKTIL
                     GKMHQDAAPPDSVEVFCYSQHLRGLIRTRVQQLVSECIELRLSSTRQETGRFKALRVS
                     GQTWGLFFERLNVSVQKLENAIEFYGAISHNKLHGLSVQVETNHVKLPAVVDGFASEG
                     IIQFFFEETQDENGFNIYILDESNRVEVYHHCEGSKEELVRDVSRFYSSSHDRFTYGS
                     SFINFNLPQFYQIVKVDGREQVIPFRTKSIGNMPPANQDHDTPLLQQYFS"
     gene            10846..11787
                     /gene="hemC"
                     /locus_tag="JN001_000717"
     CDS             10846..11787
                     /gene="hemC"
                     /locus_tag="JN001_000717"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HAY9052043.1"
                     /translation="MLDNVLRIATRQSPLALWQAHYVKDKLMASHPGLVVELVPMVTR
                     GDVILDTPLAKVGGKGLFVKELEVALLENRADIAVHSMKDVPVEFPQGLGLVTICERE
                     DPRDAFVSNNYDSLDALPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLSKLD
                     NGEYDAIILAVAGLKRLGLESRIRAALPPEISLPAVGQGAVGIECRLDDARTRELLAA
                     LNHHETALRVTAERAMNTRLEGGCQVPIGSYAELIDGEIWLRALVGAPDGSQIIRGER
                     RGAPQDAEQMGISLAEELLNNGAREILAEVYNGDAPA"
     gene            11784..12524
                     /gene="hemD"
                     /locus_tag="JN001_000718"
     CDS             11784..12524
                     /gene="hemD"
                     /locus_tag="JN001_000718"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HAY9052044.1"
                     /translation="MSILVTRPSPAGEELVSRLRTLGQVAWHFPLIEFSPGRQLPQLA
                     DQLAALGESDLLFALSQHAVAFAQSQLHQQDRKWPRLPDYFAIGRTTALALHTVSGQK
                     ILYPQDREISEVLLQLPELQNIAGKRALILRGNGGRELIGDTLTARGAEVTFCECYQR
                     CAIHYDGAEEAMRWQSREVTMVVVTSGEMLQQLWSLIPQWYREHWLLRCRLLVVSERL
                     AKLARELGWQDIKVADNADNDALLRALQ"
     gene            12546..13739
                     /gene="hemX"
                     /locus_tag="JN001_000719"
     CDS             12546..13739
                     /gene="hemX"
                     /locus_tag="JN001_000719"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY9052045.1"
                     /translation="MTEQEKTSAVVEETREAVDTTSQPVATEKKSKNNTALILSAVAI
                     AIALAAGVGLYGWGKQQAVNQTATSDALANQLTALQKAQESQKAELEGIIKQQAAQLK
                     QANRQQETLAKQLDEVQQKVATISGSDAKTWLLAQADFLVKLAGRKLWSDQDVTTAAA
                     LLKSADASLADMNDPSLITVRRAITDDIASLSAVSQVDYDGIILKLNQLSNQVDNLRL
                     ADNDSDGSPMDSDGEELSSSISEWRINLQKSWQNFMDNFITIRRRDDTAVPLLAPNQD
                     IYLRENIRSRLLVAAQAVPRHQEETYRQALENVSTWVRAYYDTDDATTKAFLDEVDQL
                     SQQNISMDLPETLQSQAMLEKLMQTRVRNLLAQPAAGTTEAKPAPAPAPAPQGDTPAA
                     APQGE"
     gene            13742..14938
                     /gene="hemY"
                     /locus_tag="JN001_000720"
     CDS             13742..14938
                     /gene="hemY"
                     /locus_tag="JN001_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX biogenesis protein HemY"
                     /protein_id="HAY9052046.1"
                     /translation="MLKVLLLFVLLIAGIVVGPMIAGHQGYVLIQTDNYNIETSVTGL
                     AIILILAMVVLFAIEWLLRRIFRTGAHTRGWFVGRKRRRARKQTEQALLKLAEGDYQQ
                     VEKLMAKNADHAEQPVVNYLLAAEAAQQRGDEARANQHLERAAELAGNDTIPVEITRV
                     RLQLARNENHAARHGVDKLLEVTPRHPEVLRLAEQAYIRTGAWSSLLDIIPSMAKAHV
                     GDEEHRAMLEQQAWIGLMDQARADNGSEGLRNWWKNQSRKTRHQVALQVAMAEHLIEC
                     DDHDTAQQIIIDGLKRQYDDRLLLPIPRLKTNNPEQLEKVLRQQIKNVGDRPLLWSTL
                     GQSLMKHGEWQEASLAFRAALKQRPDAYDYAWLADALDRLHKPEEAAAMRRDGLMLTL
                     QNNPPQ"
     gene            complement(15862..17097)
                     /locus_tag="JN001_000721"
     CDS             complement(15862..17097)
                     /locus_tag="JN001_000721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY9052047.1"
                     /translation="MLQQVPTRAFHVMAKPSGSDCNLNCDYCFYLEKQSLYREKPVTH
                     MDDDTLEAYVRHYIAASEPQNEVAFTWQGGEPTLLGLDFYRRAVKLQAKYGAGRKISN
                     SFQTNGVLLDDKWCAFLAENHFLVGLSLDGPAEIHNQYRVTKGGRPTHKLVMRALTLL
                     QKHHVDYNVLVCVNRTSAQQPLQVYDFLCDAGVEFIQFIPVVERLADETAASDGLKLH
                     APGDIQGELTEWSVRPDEFGEFLVAIFDHWIKRDVGKIFVMNIEWAFANFVGAPGAVC
                     HHQPTCGRSVIVEHNGDVYACDHYVYPQYRLGNMHQQTIAEMIDSPQQQVFGEDKFKQ
                     LPAQCRSCNVLKACWGGCPKHRFMLDASGKPGLNYLCAGYQRYFRHLPPYLKAMADLL
                     AHGRPASDIMQAHLLVVNK"
     gene            complement(17244..17320)
                     /locus_tag="JN001_000722"
     tRNA            complement(17244..17320)
                     /locus_tag="JN001_000722"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17284..17286),aa:Pro,seq:tgg)
     gene            complement(17363..17449)
                     /locus_tag="JN001_000723"
     tRNA            complement(17363..17449)
                     /locus_tag="JN001_000723"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17413..17415),aa:Leu,seq:cag)
     gene            complement(17470..17545)
                     /locus_tag="JN001_000724"
     tRNA            complement(17470..17545)
                     /locus_tag="JN001_000724"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17510..17512),aa:His,seq:gtg)
     gene            complement(17604..17680)
                     /locus_tag="JN001_000725"
     tRNA            complement(17604..17680)
                     /locus_tag="JN001_000725"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17644..17646),aa:Arg,seq:ccg)
     gene            complement(17783..19168)
                     /locus_tag="JN001_000726"
     CDS             complement(17783..19168)
                     /locus_tag="JN001_000726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9052048.1"
                     /translation="MADNKPELQRGLEARHIELIALGGTIGVGLFMGAASTLKWAGPS
                     VLLAYIIAGLFVFFIMRSMGEMLFLEPVTGSFAVYAHRYMSPFFGYLTAWSYWFMWMA
                     VGISEITAVGVYVQFWFPEMAQWIPALIAVALVALANLAAVRLYGEIEFWFAMIKVTT
                     IIVMIVIGLGVIFFGFGNGGQSIGFSNLTEHGGFFAGGWKGFLTALCIVVASYQGVEL
                     IGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNESGSNGSPFVLTFA
                     KIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRHGVPVA
                     GVAVSIAILLIGSCLNYIIPNPQRVFVYVYSASVLPGMVPWFVILISQLRFRRAHKAA
                     IASHPFRSILFPWANYVTMAFLICVLIGMYFNEDTRMSLFVGIIFMLAVTAIYKVFGL
                     NRHGKAHKLEE"
     gene            complement(19359..20099)
                     /gene="rffM"
                     /locus_tag="JN001_000727"
     CDS             complement(19359..20099)
                     /gene="rffM"
                     /locus_tag="JN001_000727"
                     /EC_number="2.4.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     N-acetylmannosaminouronosyltransferase"
                     /protein_id="HAY9052049.1"
                     /translation="MNNNTTAPTYTLRGLQLIGWRDMQHALDYLFADGQLKQGTLVAI
                     NAEKMLTIEDNAEVRELINAAEFKYADGISVVRSVRKKYPQAQVSRVAGADLWEELMA
                     RAGKEGTPVFLVGGKPEVLAQTEAKLRNQWNVNIVGSQDGYFKPEQRQALFERIHASG
                     AQIVTVAMGSPKQEIFMRDCRLVHPDALYMGVGGTYDVFTGHVKRAPKIWQTLGLEWL
                     YRLLSQPSRIKRQLRLLRYLRWHYTGNL"
     gene            complement(20102..21454)
                     /gene="wzyE"
                     /locus_tag="JN001_000728"
     CDS             complement(20102..21454)
                     /gene="wzyE"
                     /locus_tag="JN001_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen assembly polymerase"
                     /protein_id="HAY9052050.1"
                     /translation="MSLLQFSGLFVVWLLCTLFIATLTWFEFRRVRFNFNVFFSLLFL
                     LTFFFGFPLTSVLVFRFDVGVAPPEILLQALLSAGCFYAVYYVTYKTRLRKRVADVPR
                     RPLFTMNRVETNLTWVILMGIALVSVGIFFMHNGFLLFRLNSYSQIFSSEVSGVALKR
                     FFYFFIPAMLVVYFLRQDSKAWLFFLVSTVAFGLLTYMIVGGTRANIIIAFAIFLFIG
                     IIRGWISLWMLAAAGVLGIVGMFWLALKRYGMNVSGDEAFYTFLYLTRDTFSPWENLA
                     LLLQNYDNIDFQGLAPIVRDFYVFIPSWLWPGRPSMVLNSANYFTREVLNNHSGLAIS
                     PTLIGSLVVMGGALFIPLGAIVVGLIIKWFDWLYELGNREPNRYKAAILHSFCFGAIF
                     NMIVLAREGLDSFVSRVVFFIVVFGACLMIAKLLYWLFESAGLIHKRTKSSLRTQVEG
                     "
     gene            complement(21451..22530)
                     /gene="rffT"
                     /locus_tag="JN001_000729"
                     /gene_synonym="wecF"
     CDS             complement(21451..22530)
                     /gene="rffT"
                     /locus_tag="JN001_000729"
                     /gene_synonym="wecF"
                     /EC_number="2.4.1.325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TDP-N-acetylfucosamine:lipid II
                     N-acetylfucosaminyltransferase"
                     /protein_id="HAY9052051.1"
                     /translation="MTVLIHVLGSDIPHHNRTVLRFFNDALAATSEHAREFMVVGKDD
                     GLSDSCPALSVQFFPGKKSLAEAVIAKAKANRQQRFFFHGQFNPTLWLALLSGGIKPS
                     QFFWHIWGADLYELSSGLRYKLFYPLRRLAQKRVGCVFATRGDLSFFAKTHPKVRGEL
                     LYFPTRMDPSLNTMANDRQREGKMTILVGNSGDRSNDHIAALRAVHQQFGDTVKVVVP
                     MGYPPNNEAYIEEVRQAGLELFSEENLQILSEKLEFDAYLALLRQCDLGYFIFARQQG
                     IGTLCLLIQAGIPCVLNRENPFWQDMTEQHLPVLFTTDDLNEDIVREAQRQLASVDKN
                     TIAFFSPNYLQGWQRVLAIAAGEVA"
     gene            complement(22527..23777)
                     /gene="wzxE"
                     /locus_tag="JN001_000730"
     CDS             complement(22527..23777)
                     /gene="wzxE"
                     /locus_tag="JN001_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid III flippase WzxE"
                     /protein_id="HAY9052052.1"
                     /translation="MSLAKASLWTAASTLVKIGAGLLVGKLLAVSFGPAGLGLAANFR
                     QLITVLGVLAGAGIFNGVTKYVAQYHDNPQQLRRVVGTSSAMVLGFSTLMALVFVLAA
                     APISQGLFGNTDYQGLVRLVALVQMGIAWGNLLLALMKGFRDAAGNALSLIVGSLIGV
                     LAYYVSYRLGGYEGALLGLALIPALVVIPAAIMLIKRGVIPLSYLKPSWDNGLAGQLS
                     KFTLMALITSVTLPVAYIMMRKLLAAQYSWDEVGIWQGVSSISDAYLQFITASFSVYL
                     LPTLSRLTEKRDITREVVKSLKFVLPAVAAASFTVWLLRDFAIWLLLSNKFTAMRDLF
                     AWQLVGDVLKVGAYVFGYLVIAKASLRFYILAEVSQFTLLMVFAHWLIPAHGALGAAQ
                     AYMATYIVYFSLCCGVFLLWRRRA"
     gene            complement(23779..24909)
                     /gene="rffA"
                     /locus_tag="JN001_000731"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
     CDS             complement(23779..24909)
                     /gene="rffA"
                     /locus_tag="JN001_000731"
                     /gene_synonym="fcnA"
                     /gene_synonym="wecE"
                     /EC_number="2.6.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-4-amino-4,6-dideoxygalactose transaminase"
                     /protein_id="HAY9052053.1"
                     /translation="MIPFNAPPVVGTELDYMQSAMGSGKLCGDGGFTRRCQQWLEQRF
                     GSAKVLLTPSCTASLEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDVRP
                     DTMNIDETLIEAAITDKTRVIVPVHYAGVACEMDTIMALAKKHNLFVVEDAAQGVMST
                     YKGRALGTIGHIGCFSFHETKNYTAGGEGGATLINDKALIERAEIIREKGTNRSQFFR
                     GQVDKYTWRDIGSSYLMSDLQAAYLWAQLEAADRINQQRLALWQNYYDALAPLAKAGR
                     IELPSIPDGCVQNAHMFYIKLRDIDDRSALINFLKEAEIMAVFHYIPLHGCPAGEHFG
                     EFHGEDRYTTKESERLLRLPLFYNLSPVNQRTVIATLLNYFS"
     gene            complement(24914..25588)
                     /locus_tag="JN001_000732"
     CDS             complement(24914..25588)
                     /locus_tag="JN001_000732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-fucosamine acetyltransferase"
                     /protein_id="HAY9052054.1"
                     /translation="MPVRASIEPLTWENAFFGVNSAIVRITSEAPLLTPDALAPWSRV
                     QAKIAASNTGELDALQQLGFSLVEGEVDLALPVNNVSDSGAVVAQETDIPALRQLASA
                     AFAQSRFRAPWYAPDASGRFYAQWIENAVRGTFDHQCLILRAASGDIRGYVSLRELNA
                     TDARIGLLAGRGAGAELMQTALNWAYARGKTTLRVATQMGNTAALKRYIQSGANVEST
                     AYWLYR"
     gene            complement(25566..26447)
                     /gene="rfbA"
                     /locus_tag="JN001_000733"
     CDS             complement(25566..26447)
                     /gene="rfbA"
                     /locus_tag="JN001_000733"
                     /EC_number="2.7.7.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate thymidylyltransferase RfbA"
                     /protein_id="HAY9052055.1"
                     /translation="MKGIILAGGSGTRLHPITRGVSKQLLPIYDKPMIYYPLSVLMLA
                     GIREILIITTPEDKGYFQRLLGDGSEFGIQLEYAEQPSPDGLVQAFIIGETFLNGEPS
                     CLVLGDNIFFGQGFSPKLRHVAARTEGATVFGYQVMDQERFGVVEFDDNFRAISLEEK
                     PKQPKSNWAVTGLYFYDSKVVEYAKQVKPSERGELEITSINQMYLEAGNLTVELLGRG
                     FAWLDTGTHDSLIEASTFVQTVEKRQGFKIACLEEIAWRNGWLDDEGVKRAASSLAKT
                     GYGQYLLELLRARPRQY"
     gene            complement(26466..27533)
                     /gene="rffG"
                     /locus_tag="JN001_000734"
     CDS             complement(26466..27533)
                     /gene="rffG"
                     /locus_tag="JN001_000734"
                     /EC_number="4.2.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTDP-glucose 4,6-dehydratase"
                     /protein_id="HAY9052056.1"
                     /translation="MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLIYAGNLMSL
                     APVAQSDRFAFEKVDICDRAELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNI
                     VGTYTLLEAARAYWNTLTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPY
                     SASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYG
                     NGQQIRDWLYVEDHARALYCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPN
                     KPHGVVHYRDLITFVADRPGHDLRYAIDASKIARELGWLPQETFESGMRKTVQWYLAN
                     ESWWKQVQDGSYQGERLGLKG"
     gene            complement(27533..28795)
                     /gene="wecC"
                     /locus_tag="JN001_000735"
     CDS             complement(27533..28795)
                     /gene="wecC"
                     /locus_tag="JN001_000735"
                     /EC_number="1.1.1.336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetyl-D-mannosamine dehydrogenase"
                     /protein_id="HAY9052057.1"
                     /translation="MSFATISVIGLGYIGLPTAAAFASRQKQVIGVDINQHAVDTINR
                     GEIHIVEPDLASVVKTAVEGGFLRASTTPVEADAWLIAVPTPFKGDHEPDMTYVESAA
                     RSIAPVLKKGALVILESTSPVGSTEKMAEWLAEMRPDLTFPQQVGEQADVNIAYCPER
                     VLPGQVMVELIKNDRVIGGMTPVCSTRASELYKIFLEGECVVTNSRTAEMCKLTENSF
                     RDVNIAFANELSLICADQGINVWELIRLANRHPRVNILQPGPGVGGHCIAVDPWFIVA
                     QNPQQARLIRTAREVNDHKPFWVIDQVKAAVADCLAATDKRASELKIACFGLAFKPNI
                     DDLRESPAMEIAELIAQWHSGETLVVEPNIHQLPKKLTGLCTLAQLDEALATADVLVM
                     LVDHSQFKVINGDNVHQQYVVDAKGVWR"
     gene            complement(28792..29922)
                     /gene="wecB"
                     /locus_tag="JN001_000736"
     CDS             complement(28792..29922)
                     /gene="wecB"
                     /locus_tag="JN001_000736"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312746.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HAY9052058.1"
                     /translation="MKVLTVFGTRPEAIKMAPLVHALAKAPFFEAKVCVTAQHREMLD
                     QVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGLKPILAEFKPDVVLVHGDTTTTLAT
                     SLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQNLLREN
                     VADSRIFITGNTVIDALLWVRDQVMSSDTLRSELVANYPFIDPNKKMILVTGHRRESF
                     GRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPF
                     VWLMNHAWLILTDSGGIQEEAPSLGKPVLVMRDTTERPEAVTAGTVRLVGTDKQRIVE
                     EVTRLLKDENEYQTMSRAHNPYGDGQACSRILEALKNNRISL"
     gene            complement(29978..31024)
                     /gene="wzzE"
                     /locus_tag="JN001_000737"
     CDS             complement(29978..31024)
                     /gene="wzzE"
                     /locus_tag="JN001_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709589.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECA polysaccharide chain length modulation
                     protein"
                     /protein_id="HAY9052059.1"
                     /translation="MTQPMPGKPAEDAENELDIRGLFRTLWAGKLWIIGMGLAFALIA
                     LAYTFFARQEWSSTAITDRPTVNMLGGYYSQQQFLRNLDVRSNMASADQPSVMDEAYK
                     EFVMQLASWDTRREFWLQTDYYKQRMVGNSKADAALLDEMINNIQFIPGDFTRAVNDS
                     VKLIAETAPDANNLLRQYVAFASQRAASHLNDELKGAWAARTIQMKAQVKRQEEVAKA
                     IYDRRMNSIEQALKIAEQHNISRSATDVPAEELPDSEMFLLGRPMLQARLENLQAVGP
                     AFDLDYDQNRAMLNTLNVGPTLDPRFQTYRYLRTPEEPVKRDSPRRAFLMIMWGIVGG
                     LIGAGVALTRRCSK"
     gene            complement(31036..32139)
                     /gene="wecA"
                     /locus_tag="JN001_000738"
     CDS             complement(31036..32139)
                     /gene="wecA"
                     /locus_tag="JN001_000738"
                     /EC_number="2.7.8.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine--undecaprenyl-phosphate
                     N-acetylglucosaminephosphotransferase"
                     /protein_id="HAY9052060.1"
                     /translation="MNLLTVSTDLISIFLFTTLFLFFARKVAKKVGLVDKPNFRKRHQ
                     GLIPLVGGISVYAGICFTFGIVDYYIPHASLYLACAGVLVFIGALDDRFDISVKIRAT
                     IQAAVGIVMMVFGKLYLSSLGYIFGSWEMALGPFGYFLTLFAVWAAINAFNMVDGIDG
                     LLGGLSCVSFAAIGMILWFDGQTSLAIWCFAMIAAILPYIMLNLGILGRRYKVFMGDA
                     GSTLIGFTVIWILLETTQGKTHPISPVTALWIIAIPLMDMVAIMYRRLRKGMSPFSPD
                     RQHIHHLIMRAGFTSRQAFVLITLAAALLASIGVLAEYSHFVPEWVMLVLFLLAFFLY
                     GYCIKRAWKVARFIKRVKRRLRRNRGGSPNLTK"
     gene            complement(32379..33638)
                     /gene="rho"
                     /locus_tag="JN001_000739"
     CDS             complement(32379..33638)
                     /gene="rho"
                     /locus_tag="JN001_000739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HAY9052061.1"
                     /translation="MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAK
                     SGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIR
                     PPKEGERYFALLKVNEVNFDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTAR
                     VLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTE
                     MQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
                     VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEE
                     FKGTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGE
                     IDAMEFLINKLAMTKTNDDFFEMMKRS"
     gene            complement(33723..33824)
                     /gene="rhoL"
                     /locus_tag="JN001_000740"
     CDS             complement(33723..33824)
                     /gene="rhoL"
                     /locus_tag="JN001_000740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rho operon leader peptide rhoL"
                     /protein_id="HAY9052062.1"
                     /translation="MRSEQISGSSLNPSCRFSSAYSPVTRQRKDMSR"
     gene            complement(33965..34294)
                     /gene="trxA"
                     /locus_tag="JN001_000741"
     CDS             complement(33965..34294)
                     /gene="trxA"
                     /locus_tag="JN001_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017375425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxA"
                     /protein_id="HAY9052063.1"
                     /translation="MSDKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILD
                     EIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKE
                     FLDANLA"
     gene            34425..35690
                     /gene="rhlB"
                     /locus_tag="JN001_000742"
     CDS             34425..35690
                     /gene="rhlB"
                     /locus_tag="JN001_000742"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlB"
                     /protein_id="HAY9052064.1"
                     /translation="MSKTHLTEQKFSDFALHPKVVEVLEKKGFHNCTPIQALALPLTL
                     AGRDVAGQAQTGTGKTMAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHA
                     DAEPLAEATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQ
                     VVVLDEADRMYDLGFIKDIRWLFRRMPPANQRLNMLFSATLSYRVRELAFEQMNNAEY
                     IEVEPEQKTGHRIKEELFYPSNEEKMRLLQTLIEEEWPDRAIIFANTKHRCEEIWGHL
                     AADGHRVGLLTGDVAQKKRLRILDEFTRGDLDILVATDVAARGLHIPAVTHVFNYDLP
                     DDCEDYVHRIGRTGRAGASGHSISLACEEYALNLPAIETYIGHSIPVSKYNPDALMTD
                     LPKPLRLTRPRTGNGPRRTGAPRNRRRSG"
     gene            35824..37308
                     /gene="gppA"
                     /locus_tag="JN001_000743"
     CDS             35824..37308
                     /gene="gppA"
                     /locus_tag="JN001_000743"
                     /EC_number="3.6.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanosine-5'-triphosphate,3'-diphosphate
                     diphosphatase"
                     /protein_id="HAY9052065.1"
                     /translation="MGSTSSLYAAIDLGSNSFHMLVVREVAGSIQTLTRIKRKVRLAA
                     GLNSENALSNEAMERGWQCLRLFAERLQDIPPSQIRVVATATLRLAVNAGDFIAKAQE
                     ILGCPVQVISGEEEARLIYQGVAHTTGGADQRLVVDIGGASTELVTGTGAQTTSLFSL
                     SMGCVTWLERYFADRNLGQENFDAAEKAAREVLRPVADELRYHGWKVCVGASGTVQAL
                     QEIMMAQGMDERITLEKLQQLKQRAIHCGRLEELEIDGLTLERALVFPSGLAILIAIF
                     TELNIQCMTLAGGALREGLVYGMLHLAVEQDIRSRTLRNIQRRFMIDIDQAQRVAKVA
                     ANFFDQVEKEWHLEAISRDLLISACQLHEIGLSVDFKQAPQHAAYLVRNLDLPGFTPA
                     QKKLLATLLLNQTNPVDLSSLHQQNAVPPRVAEQLCRLLRLAIIFASRRRDDLVPEMT
                     LQANHELLTLTLPQGWLTQHPLGKEIIAQESQWQSYVHWPLEVH"
     gene            complement(37355..39376)
                     /gene="rep"
                     /locus_tag="JN001_000744"
     CDS             complement(37355..39376)
                     /gene="rep"
                     /locus_tag="JN001_000744"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase Rep"
                     /protein_id="HAY9052066.1"
                     /translation="MRLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCG
                     YQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMK
                     ANFSLFDDTDQLALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPSQAAASAIGER
                     DRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQRNEEVRERWQNKIRYLLVDEYQD
                     TNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQN
                     YRSSGRILKAANILIANNPHVFEKRLFSELGYGTELKVLSANNEEHEAERVTGELIAH
                     HFVNKTQYKYYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRV
                     LTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGY
                     EALTRFTHWLAEIQRLAEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQL
                     FSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESEEELDQVQLMTLHASKGLEFP
                     YVYMVGMEEGFLPHQSSIDEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRP
                     EPSRFLLELPQDDLIWEQERKVVSAEERMQKGQSHLANLKAMMAAKRGK"
BASE COUNT         9863 a        10789 c        10046 g         9032 t
ORIGIN      
        1 cagaaggtgg cgttaaatct cgcttcaggt gaagggaatt tctttatccg tcctggcggc
       61 gtgttttatg ttgcgggaga taaagtcggc atcattcgtc tggatgcctt taaaaccagt
      121 aaagagattc agtttgcggt gcagtcaggg ccaatgttat tagaaaacgg cgtaattaat
      181 ccacgcattc acccgaatgt tgcctcgcgt aaaattcgta acggtgtagg gattaataaa
      241 caagggaacg ccgtgttttt gttgagccag caggcgacaa atttttatga ttttgcctgt
      301 tatgccaaag cgaaactgaa cgttgagcag ttgctttatc ttgatggcac aatttcacat
      361 atgtatatga aaggcggggc aatcccgtgg caacgctatc cttttgtcac catgatttcc
      421 gtcgagcgga aaggttaagc attgtacact cgaggaggcc agacaaactg ggactggcta
      481 cacagctgga aaatcatcag ataaatgaag ggaaacaaaa atgaaaaaaa cgctcgcaac
      541 gttattttta ttaacgtgtc tgggatcatc atccgcctat gcggataacg ctttgatttt
      601 acaaactgat tttagcctga aagatggtgc cgtctcggcg atgaaagggg tcgcattcgg
      661 cgttgaccat aatcttaaaa tctttgattt aacacacgaa attccaccgt ataacatctg
      721 ggaaggcgct tatcgcctgt atcagactgc cagttactgg ccgcaaggtt cggtgtttgt
      781 tagcgtggtc gatccgggcg taggcactga ccgtaaatcg gtagtgctga aaaccaaaag
      841 cggtcaatac ttcgtttcac cagataacgg tacgctcact ttggtggcac aaactctggg
      901 tattgatagc gtccgggaaa tcgacgaaaa agctaaccgc ctgaaaggtt ctgaaaagtc
      961 atataccttc cacggtcgtg acgtgtatgc ctacaccggt gcacgtctgg cttccggggc
     1021 gattacgttc gaacaggtgg ggccagagct tccagcaaaa gttgtcgaac tttcttatca
     1081 gaaagcaaaa gcaacaaaag gtgaagtgaa gggcaatatc ccgattctcg atattcagta
     1141 cggcaacgtc tggagcaata tcagcgacga gttgctgaat caggcagaaa tcaaactcaa
     1201 cgacacgttg tgtgtgacca tttccgaagg ttcccagcaa aaatacgcag ggaaaatgcc
     1261 gtatgtcgca agcttcggcg atgtgccgga aggccagccg atggtgtatc tgaacagctt
     1321 attgaatgtt tccgtggcgc tgaatatgga taatttcgcg cagaaacatc aggttgcgtc
     1381 tggtgctgac tggaatattg atgtgaagaa gtgcgctaag taaggtgctg atgcggaatg
     1441 cggtgtggcg caccgcatcc cgcaacgtca caccgtctcc aaccgggcat aagccgccac
     1501 cagccattta ataccctggc cctggaatgc cacctgcaaa cggctatgtt caccgctgcc
     1561 ttccatattg acgatggtgc cttcaccaaa cttagcgtgg cgtacacgct ggccgagctt
     1621 gtagccgctg tcgttctcga ccatcggcgt acccatccgc tgatggctga ccgggcggct
     1681 taccgtggcg cgcaggcgca cctcttccac acactcttcc ggcagctcgc caataaagcg
     1741 cgacgggcga tggtaaacct ctttgccata cagacggcga gtttccgcgt aggtcagcgt
     1801 cagtttctgc atcgcgcggg ttacgccaac gtaggccaga cggcgttctt cttccagacg
     1861 cccgccttca tccagcgaca tctggcttgg gaacatgccc tcttccatac cgacgataaa
     1921 cacctgcggg aactccagac ctttcgccga gtgcatggtc atcagttgta ccgcatcctg
     1981 ccaggtatcc gcctgccctt cgcctgcttc cagcgccgca tgggatagga acgcctgcag
     2041 cggcattaaa tcttcgtctt cttcgttgta gctgaactgg cgcgttgccg tcaccagttc
     2101 ctctaagttt tcgatacgcg tctgaccttt ttcgcccttc tcctgctcgt acatggtacg
     2161 caggccggag tctttaatta cccggtcagt ctgtacatgc agcggcatat cggcagtttc
     2221 ctgcgctaag gcgtcgatca gttccataaa ccgctgtaag gcgctggcag cacgtccggc
     2281 gagggctttt tcctgcaaca gttcacgaca tgcctgccag agtgttaact ggcgatcgcg
     2341 cgatgtctga cgtaccacgt ccagcgtccg gtcaccaata ccccgcgttg gcgtattcac
     2401 cacacgctca aaggccgcgt cgtcgttacg gttggcaatc aggcgcagat acgagagcgc
     2461 atctttgatt tcctggcgtt cgaagaagcg catcccgccg taaatacggt acggcatact
     2521 cgcctgcaac agtgcttctt ccagcacacg cgactgggcg ttactgcggt agagaatggc
     2581 gcactcggca agcgccccgc cgttgtcctg ccaggttttg atgcggttaa ccacaaaacg
     2641 cgcttcatcg agttcgttaa aagcgcaata gagggaaata ggctcaccgt ccgcgccatc
     2701 ggtccacagt tttttaccca gacgcccgtt attgttttca atcagggcgt tagcggcgct
     2761 cagaatattg ctggtagagc ggtagttttg ctccagacga atagtttcgg caccggggaa
     2821 atcattaagg aaacgctgaa tattctccac ctgcgccccg cgccagccgt agattgactg
     2881 gtcgtcatca ccgacgatca tcactttgcc ggtgtcgccc gccagcaggc ggatccacgc
     2941 gtactgaatg ttgttggtat cctggaattc gtccaccagg atattggtaa aacgttcgcg
     3001 gtagtgttgc aggatatgcg gcttgttaag ccacaactcg tgagcgcgca gcagcagctc
     3061 ggcgaagtcc accaggcccg cgcggtcact cgcttcctga tacgcctgat acaccttctg
     3121 ccaggtctgc tccaccggat taccgtagct ttgaatatga tgtggacgca ggccttcatc
     3181 tttctggctg ttgatgtacc acattgcctg gcgcggcggc cactgcttct cgtcgaggtt
     3241 catcgccttg attaggcgtt tgagcaggcg tagctggtcc tcgctgtcga ggatctgaaa
     3301 atcctgcggc agattggcgt ccatatggtg cgcacgcagc agacggtgcg ccagcccgtg
     3361 gaaggtgccg acccacatgc cgccctggct ggtgcccatt agctgcccga tacgatgacg
     3421 catctccgcc gccgctttgt tggtaaacgt caccgccata atcgagtatg gcaagcagtt
     3481 ttccacgctc atcagccagg cgatacgatg caccagtacg cgcgtcttac cactgcccgc
     3541 gcccgccagc accagaaggt tgctgcgtgg cgcggccacc gcttcgcgct gtttgtcatt
     3601 aaggctgtcg agcaggtaag aaacgtccat tggcaccgcc gcgtaaaaat aggttgggcg
     3661 gagaagcgca acgccctccg ccaaaaagct gggtatatat acagatttgc tgattatatc
     3721 agcgaggtca gagatgccaa ccgggaaatt tccagatgcg gcagtaaacg gctgtcccag
     3781 gtttgcatca gatcgccatt ttccggtctg atccaacagg cctgcattcc gctgcgaatt
     3841 gccccaccca cgtcagtggt gagatcgtcc ccaacatgta agatctcgcc gatcggcacg
     3901 ttgagttttt ccgcagccag aaagtacata tcgctgaacg gttttgagcg cccgtgcggg
     3961 ccagcgcgca gcacaaactc aaaataatcc cccaaaccaa acagttccgg ctgggcgtta
     4021 ccgttggtga tcgccaccag cggccatttc ttcgccagct gttttaaggt gtcgtgagtt
     4081 tgctgcggga cgtcgattcg gctgcgccat ttggcaaagt tgatcattgc tgcgtgtgcg
     4141 cctgcactgg cttcttcggc actcagcccg gcgtcgagca tcgcttgttc aatcgaacga
     4201 aaacgccagc gcgtcacgtc gtgataaatc tcgggttccg cttcccgtac cgcctggcgc
     4261 aggcgttgca gatcttcatt ctggaagctg cgcagcgccg gatgataatt ttgcacaaag
     4321 gtaagcgcct ctcgctcggt gcgcaaaatc accggacggt tatcgtaaag ggtatcatcc
     4381 aggtcaaagg tgagcgccga gatgcgcccc aaaggccggt aaaaacgcat tatttccccc
     4441 gtttggcgcg tggatgcgcc gcatcgtaca ccgaggcaag gtgttgaaaa tcaagatgag
     4501 tatagatttg cgtggtggag aggttggcat gacccagtag ctcctgcaca ccacgaagat
     4561 cgccgctcga ctccagcata tgcgtagcga acgagtgacg taatttatgt gggtgaacgt
     4621 gattattcag cccttgtttt atgccccatt cggcaaagcg tttctgcaca ttacgcgcgg
     4681 agatacgctt gcccagtttc gacagaaaaa gcgcgtcgtc ttcgctacca aacaggtcgc
     4741 gcaaatcaag ccagtgctca atccacgcca cagcgttgcg accaatcggc aggcggcgct
     4801 ctttgctgcc tttccccatt acccacactt caccagactc caggtcgagg tgtttgatat
     4861 ccagccccac cagctcggaa agacgcagac cagcgccgta catcacttcc agcattgcac
     4921 ggtcgcgtac agcgagggga tcgttgatat caatatccag cagccgattc atatcgtcga
     4981 cgtcgatatt tttcggcaga tgacgcggcg ctttcggtgc cgaaacacct ttcgccgggt
     5041 tagctttgag ttcgttctgg ctgaccagcc agtcaaaaaa gctacgtagc gcagaaagcc
     5101 gtaacgccag acttgctgct cccagccctt tacggcgact gcgtacagca aaattgcgca
     5161 ccatcgtcac atcacattgc tgccagcttt gcaggccgtt ttcgctggca aaattgatga
     5221 tcgcctcaag ctgacgctgg tagttaagca gggttatcgg gctaagctgg cgctccacgc
     5281 tcagataacg taggtagcgt tctacatcgg tgtgtaaatc ggtcatacgc gttcaatcca
     5341 acgctccaga agctccggca acatcagcgc aatttcatga agtaactgcg ttccttgccc
     5401 ttgttgatag tgactggcat cgcgactggt aaacagcacg acacccaaat cagcatcgct
     5461 tcccagcatc gacatcgcca ccgatcccac cgctttcgct tccggtagca ccaccagcag
     5521 ctctggtccg ttaagcggcc caagatagtg ctgttcctgc cccaaacgct gaatacgcag
     5581 cggttcgaaa gactgacggc ttaatgccag atgagtgtgg ttcgacggcg cacctaagcg
     5641 ccagcgatcc ggaaacaggc gcagactcgc acctgccagg ccgagatcgc gcgcccagcg
     5701 gtgaaagcgc atcagcatat cgtcgagact gctggcggcg gtgagactgc gctgcaggta
     5761 gagtaggcga taaaacaggc cttcgttggc gatagcctgt tccatcaaca gcgccatgtt
     5821 ctcttccaga acatgaatat gattacgtgc gcgggccatg tgccactcga ccaacgaaac
     5881 ggtgccgcgt accggatgtg gcacacgtat cgcttctact gcgcgcgcat tacggataaa
     5941 aaactcagga tttttaatca gataatcgac aaccgcccgg tcatcaagct ccgtgagtgt
     6001 ttcctgcagt tcttcccctg gttgcttcat agatgaataa atccgtcgta gacatgtacc
     6061 gccgggccag tcatatataa cgggtgaccc ggacctttcc aggcgatatc aagacgaccg
     6121 ccggggagtt ccacgcgtac ttcttcggcc agcaaacctt gctgaatccc tactgcaacc
     6181 gccgcacacg cgccgctgcc gcaggcctgg gtttctcctg ccccacgctc ataaacgcgt
     6241 aaacgaatat gctcgcgctt aaccacttgc ataaaaccga tattggcgcg ctccggaaaa
     6301 cgctcgtggc tttccagaac aggaccaagc gtttctaccg ccgcggtatc gacatcatcg
     6361 acctgaatca cgcaatgcgg atttcccatc gacaccacgc cgcataagat tgtctgctcg
     6421 gcggcgcgca taatataggt cttttccgct ttgttagcgc gaaacggcac agcggaaggt
     6481 tcgaagttgg gttcgcccat atttacgcgg accagatcat catcggtgac ggtcagaacc
     6541 atccgcccgt tggcggtgct gacgcggata tcgcgcttat tggtcagccc tttcaggcgc
     6601 acaaaacggg caaagcagcg cgcaccgttg ccgcactgcg ccacttcact gccatcagca
     6661 ttgaaaatgc gatagtgaaa atccagttca ggatcatacg gcggctcaac caccagcagc
     6721 tggtcaaacc ctacccccag gtgccgatcc gccagccgac gaatcagctc cggtgaaaaa
     6781 aagacattct gcgttaccgc gtcgacgacc ataaaatcgt tgccaaggcc atgcattttc
     6841 gagaactgca tcatttactc caatcacgcg ggtacagaaa ctgactttta gtaattcacc
     6901 tgggatggac catcccagtg gcgcgatcgt ttttatccgg caccgtggat tgcgtttgcg
     6961 tctctaccgg tttggtcggc ggcggtgcat ttttatctgc aggcgggaaa tagagcggac
     7021 ctttcagacc gcagcccgtc aggctgaaga gagtaagtaa tacagtgagt accttaaaca
     7081 cgtttttcat tatggattgc ctgtaaagtt catcgctttc tgctttctat catcgcagga
     7141 gaaggcgtaa aagcaagcgt ttagcgactc tttatgaagt ctgaaaagtg aggaaatgct
     7201 gcgagtataa cgcttactcg tgaggattta tgttctgctg gcagtttcgt gatcggcacc
     7261 tcgcgccagg atggctttat gcactatcgc aatgtggttt gtttgttggc ttttttagtt
     7321 ccgtcagcgt gaggatgctc gctcggtaaa cctgatcata atgtttacca gaaacaggga
     7381 aaggcgtggt gtaactgcgc cctaatgaag agacaaatct ttcgccacac agagacatca
     7441 ttattccggt gacggatgaa tcatgccgga acgcagcagc agaggtgcaa actttgaagc
     7501 cctgacccca tgccgctata ctgccgccat cacttaaaaa caggatacaa caatgaacga
     7561 cagtgaattt catcgcctgg ctgatcaact gtggctgacc attgaagagc atctggacga
     7621 ctgggatggc gacagcgata tcgactgcga aatcaacggc ggcgtgctga ccattacctt
     7681 tgaaaacggc agcaaaatca ttatcaaccg ccaggaaccg ctgcaccagg tatggctggc
     7741 aaccaaacaa ggcggctacc attttgatct gaaaggcgat gagtggattt gcgatcgcag
     7801 cggcgaaacc ttctgggatt tgctggaaca ggcggcgacg cagcaggcgg gtgaaacagt
     7861 cagtttccgc taagattgca tgccggataa gcctcgcttt ccggcacgtt catcacgaaa
     7921 aatattgctg taatagcggc gtatcgtgat cctgattggc aggcggcatg ttaccgatag
     7981 attttgtgcg gaacggaatc acctgttcac gaccatcaac cttcacaatc tgatagaact
     8041 gcggcaggtt gaagttgatg aagcttgagc cgtaggtgaa gcggtcgtgc gatgacgagt
     8101 agaagcgact gacgtcacgc accagttcct ctttgctgcc ttcgcagtgg tgatacacct
     8161 caacccggtt gctttcgtca agaatgtaga tattaaagcc attctcgtct tgcgtttctt
     8221 cgaagaagaa ctggatgatc ccttcactag caaagccgtc caccaccgcc ggtaatttga
     8281 cgtgattggt ttcaacctgc actgacaggc cgtgcagttt gttatgcgaa atagcgccat
     8341 aaaactcgat ggcgttctcc agcttctgta ccgatacatt caggcgttcg aagaacaagc
     8401 cccaggtttg accagaaacg cgcagcgcct tgaaacgccc ggtttcctgg cgggtgctgg
     8461 aaaggcgcag ttcaatacac tcagaaacca gttgctgcac gcgagtacgg attaacccgc
     8521 gcagatgctg gctataacag aagacttcca cgctatctgg cggtgcggcg tcctgatgca
     8581 ttttgccgag aatagttttc agggcttcga tcatcgattg ctcgccgttg aagtgcagcg
     8641 tacgcacttc gttccacgag ttgcggtaca gcaggtcaac gctacctacc aggcaatttt
     8701 gattctcgcc aaagctgaag acatccagct tacggaaatc aaaatgcacc acctgattgc
     8761 ggaacgccgc tgtcgggtca tattccaggt taacgataat cgccagatgg cggatctcac
     8821 acgggctgta gagcgccttc ggtgtcggtg caggtaagcg cagcgggaaa tggtgcgaca
     8881 cgtcggcgac catctcctgc aacttaggca aatcgacaat gccgttacct ttaatataca
     8941 aacgggtgcg cgaggtcagc aggccgttaa accatgccca cgccaccagt ttgttcaggt
     9001 aacggttata ttccagcggc tgatggctga tgatcgactc aatatttggc gcgcggttat
     9061 acagatacca acctgaacgg ttagcacggc ccggcggcac ataaataaag gtcagattcg
     9121 gttccgagag atcgggtgaa atctgcgggt ttaccagcgt cactttacct ggtaatgctt
     9181 caaacgcggc atacagctta cgcgtcagca cgccgatatc ctgcggactg gcggagacgc
     9241 taaggttatt gcgacgcgca aagcggatca gattacggta gctctgcatc atcgcgtcga
     9301 gcaactcgtt gtgcgcctca cgcacctgat caatcttcca gttagcgcgg ttatcgagca
     9361 ttgccagacg agcttcgtcc caaccccact cgctcactaa ctggctcaac actgcgcgac
     9421 gccagcctac gcaggcgcgt tcacggctga gcttttcgca cacttttaaa tagaagcagc
     9481 gacgtactaa atccagacgg gtaaaatctt caatcgccgt caggtattca gtaacacgct
     9541 ccagcatcat gcagtatgga tcgagaccaa acgatacaat ctcaccgtcg tgcaaacgct
     9601 gtttgatatc tttcgccagc agacgtgggt tcgggtattc ccaggaatag gcttccagca
     9661 gcagtgtttt cagtaccgct ttgtatgggg aatcgatact cttgtagagc tgccaaaggc
     9721 tggcaccaaa gtactcttca gcagaaagcg agcttaagcc accgagatcc agccattcat
     9781 ttggcgtcag cacgccctgc gcgtaaagcg tcatcacata gtcgtcgtaa tgctcttctt
     9841 cgtcgcacgg caccatattc cacagaatac gcttaccggc gagacgcacg gcggtacgat
     9901 aaaattcgtc aagcagcagt atatgctggg tggagccaca atcttcgccc cccaagctgc
     9961 cgctttcatt atgacggaag cggttttcat caatcaggaa gaagctgact tccacaccca
    10021 gcgaggcggc ccagctttcc agcagactac atttacgttg tagtaactgg cgctcttcgc
    10081 tatcgagcca ggattgatga cagacccaga tatccaggtc agaggaacaa ctttgcccta
    10141 cggacgaggt gctgcccatg gtgtatacac cagtaattgg aagctcacct ttcggtggat
    10201 cctgtactga cattccacga tacagttcaa gctcgttcag gtagtggcgt tgagtttcat
    10261 caggcgtgta aaggcaaatg cctttgggaa cgttaccatc aaggtaaccc ggcattagcg
    10321 gatggtgata gtgcaacaat gtcggcagta gactgtagac ctgttggaat gcaggcccca
    10381 tagcagcaag cgcgcgatcc acacgcaatt gatttatggc atccagtctc tgtttcagag
    10441 tctcaatata gaggtacaag acgtatcgcc tgatttgcta cccgtcatga ctgtgattcc
    10501 gccaacatca acggtaacac gcggcattcg ggatatttcg tatgtcaaag gtaaccgtta
    10561 ccacttttcg cgcctggttt ttttagtttc acgacgaaaa aatggtctaa aacgtgatca
    10621 atttaacacc ttgctgattg accgtaaaga aagatgcgct acatacaagt gtagcaccgt
    10681 ttattctctg taaattcctt attacgacgg cgtgaaacgc ctgtcaggat ccactgccag
    10741 acctcatttt acggtttgcg caggcgtcta cgtttcacca caacactgac atcactctgg
    10801 caaggatgtt aggatggacc acggatgata atgacggtaa caagcatgtt agacaatgtt
    10861 ttaagaattg ccacacgcca aagcccactt gcactctggc aggcacacta tgtcaaagac
    10921 aagttgatgg cgagccatcc gggcctggtc gttgaactgg taccgatggt gacgcgcggc
    10981 gatgtgattc ttgatacgcc gctggcgaaa gtaggcggaa aaggcttatt tgtaaaagag
    11041 ctggaagtcg cgctcctcga aaatcgcgcc gatatcgccg tacattcaat gaaagatgtg
    11101 ccggttgaat tcccgcaagg tctgggactg gtcactattt gtgagcgtga agatcctcgc
    11161 gatgcctttg tgtccaataa ctatgacagt ctggatgcgt taccagcagg cagtatcgtc
    11221 gggacgtcca gtttacgtcg ccagtgccaa ctggctgaac gccgcccgga tctgattatc
    11281 cgctccctgc gcggcaacgt cggcactcgc ctgagcaaac tagataacgg cgaatacgat
    11341 gccatcattc ttgccgtagc cggactaaaa cgtttaggtc tggagtcccg cattcgcgcc
    11401 gcgttaccac ccgagatttc tcttccagcg gtaggacaag gtgcggtcgg tattgaatgc
    11461 cgccttgatg atgcacgcac tcgcgagctg cttgccgcgc tgaatcacca cgaaactgca
    11521 ctgcgcgtta ccgcagaacg cgccatgaat acccgtctcg aaggcggatg tcaggtgcca
    11581 attggtagct acgccgagct tattgatggt gaaatctggc tgcgtgcgct ggtcggcgcg
    11641 ccggacggtt cgcagattat tcgcggtgaa cgccgcggtg cgccgcaaga tgccgaacaa
    11701 atggggattt cgctggcaga agagctactg aataacggcg cgcgcgagat cctcgctgaa
    11761 gtctataacg gagacgcccc ggcatgagta tcctggtcac ccgcccgtct cccgctggag
    11821 aagagttagt gagccgtctg cgcacactgg ggcaggtggc ctggcatttt ccgctgattg
    11881 agttttctcc gggtcgacaa ttaccgcaac ttgctgatca actggcggcg ctgggggaga
    11941 gcgatctgtt gtttgccctc tcgcaacacg cggttgcttt tgcccaatca cagctgcatc
    12001 agcaagatcg taaatggccc cgactacctg attatttcgc cattggacgc accaccgcac
    12061 tggcgctaca taccgtaagc ggacagaaga ttctctaccc gcaggatcgg gaaatcagcg
    12121 aagtcttgct acaattacct gaattacaaa atattgcggg caaacgtgcg ctgatattac
    12181 gtggcaatgg cggtcgtgag ctaattgggg ataccctgac agcgcgcggt gctgaggtca
    12241 ctttttgtga atgttatcaa cgatgcgcaa tccattacga tggtgcagaa gaagcgatgc
    12301 gctggcaatc ccgcgaggtg acgatggtcg ttgttaccag cggtgaaatg ttgcagcaac
    12361 tctggtcgct gatcccacaa tggtatcgtg agcactggtt actacgctgt cgactattgg
    12421 tcgtcagtga gcgtttggcg aaactcgccc gggaactggg ctggcaagac attaaggtcg
    12481 ccgataacgc tgacaacgat gcgcttttac gggcattaca ataactctca taacaggaag
    12541 ccataatgac ggaacaagaa aaaacctccg ccgtggttga agagaccagg gaggccgtgg
    12601 acaccacgtc acaacctgtc gcaacagaaa aaaagagtaa gaacaatacc gcattgattc
    12661 tcagcgcggt ggctatcgct attgctctgg cggcgggcgt cggtttgtat ggctggggta
    12721 aacaacaggc cgtcaatcag accgccacca gcgatgccct ggctaaccaa ctgacggcat
    12781 tgcaaaaagc ccaggagagc caaaaagccg agctggaagg cattattaag caacaagctg
    12841 cacagcttaa gcaggcgaat cgtcagcaag aaacgctggc aaaacagttg gatgaagtcc
    12901 aacaaaaggt cgccaccatt tccggcagcg atgctaaaac ctggctgctg gctcaggccg
    12961 attttctggt gaaactcgcc ggacggaagc tgtggagcga tcaggacgtc acgaccgctg
    13021 cagcgttgct gaaaagtgca gatgccagcc tggcggatat gaatgacccg agtctgatta
    13081 ccgttcgtcg ggcaattacc gatgatatcg ccagcctttc tgcagtttcg caggtggatt
    13141 atgacggcat catccttaag cttaatcagc tttcaaatca ggtagataac ctgcgtctgg
    13201 ccgataatga cagcgatggt tcgccgatgg attccgatgg tgaagagctt tccagttcca
    13261 tcagcgaatg gcgtatcaat ctgcaaaaaa gctggcagaa ctttatggac aacttcatta
    13321 cgattcgccg tcgtgatgac accgccgtac cgctgttagc gccaaatcag gatatctatc
    13381 tgcgcgaaaa tattcgctct cgcctgctgg tcgcagcaca agctgtaccg cgtcaccagg
    13441 aagagactta tcgccaggcg ctggagaacg tctccacctg ggtacgtgct tactacgata
    13501 ctgatgatgc caccaccaaa gcgttcctcg acgaggtgga ccagttaagc cagcaaaata
    13561 tctcgatgga tcttccggaa accctgcaaa gccaggcgat gctggaaaaa ctgatgcaga
    13621 ctcgcgtgcg taacctgctg gcacaaccgg cagcagggac aacggaagct aaacctgcac
    13681 ctgcacctgc acctgcaccg caaggtgata ctccggcagc cgcgccgcaa ggagaataac
    13741 catgctaaaa gtgttattac tctttgtttt gctgattgcg gggatagtgg ttggcccgat
    13801 gattgccggt catcagggtt atgtgctgat ccagaccgac aactacaata tcgaaaccag
    13861 cgtcacgggc ctggcgatca tattgattct ggcgatggta gtgctgtttg ccattgagtg
    13921 gctactgcgg cggatcttcc gcactggcgc gcacacccgt gggtggtttg tcgggcgtaa
    13981 gcgtcgccgt gcacgtaagc agaccgaaca ggcgctgctg aaactggcgg aaggcgatta
    14041 tcagcaagtt gaaaagctga tggcgaaaaa tgccgatcac gctgaacaac cggtggtgaa
    14101 ctatctactg gctgccgaag ccgcgcaaca acgtggtgat gaagcgcgcg ccaaccaaca
    14161 tctggaacgc gcagcggagc tggccggcaa tgacaccatt ccggtagaaa tcacccgtgt
    14221 acgtctgcaa ctggcccgta atgaaaacca tgctgcacgc cacggcgtgg ataagctgct
    14281 ggaagttacg ccacgccatc cggaagtatt acgtctggcg gaacaggcgt atatccgcac
    14341 aggtgcatgg agttctctgc tggatatcat cccatcaatg gcgaaagccc atgttggtga
    14401 tgaagaacat cgtgcaatgc tggaacaaca ggcatggatt ggcctgatgg atcaggcgcg
    14461 tgccgataac ggtagtgaag gtttgcgtaa ctggtggaaa aaccaaagcc ggaaaacgcg
    14521 tcatcaagta gcgttgcagg tggcaatggc ggaacatctt attgaatgtg acgatcatga
    14581 tactgcccag caaattatca tcgatggcct gaaacgccag tacgacgatc gcctactgct
    14641 gccgattcct cgactgaaaa ccaacaatcc ggaacagctg gaaaaagtgc tgcgccagca
    14701 gatcaaaaac gtcggcgatc gcccgctgtt gtggagcaca ctgggccagt cactgatgaa
    14761 gcacggagaa tggcaggaag catcgctcgc cttccgcgca gcgctgaaac aacgtccgga
    14821 cgcctacgat tacgcatggc ttgccgacgc gctggacaga ctgcacaagc cggaagaagc
    14881 tgcagcgatg cgtcgcgacg gtttgatgtt aacgttgcag aacaacccac cacagtagtt
    14941 ccttctcacc cggaggcaag cacctccggg acctttctga tgcataaaaa aacgcctgct
    15001 cttattacgg agcaggcgtt aaaacaggtc tgtatgacaa caagtgggtg cttcactcaa
    15061 cgttgtgtcc atggtgtctg atgaggcata agcgacatct gtcagtggac gataagcacc
    15121 gtaaacggct ctgcgtcatt ccggagttta tgaggcacta aggcgaacat aagagatgga
    15181 atgagcatct actcgtttat tatgccacag agaatcggga aataacatcc cttaacactt
    15241 gttatgagat aattctgtaa tcctctttgc ttcctgagta ataacttcct gagtgaatat
    15301 ttaacctgag cttgatccta cacatactta ttatgaatga taaaattcat tcaattaata
    15361 acacatatat taattgccgt taaaactaaa aaaagcatca ataatcaacg cgatataata
    15421 aacctgcctt acatatcaac tgcgccagag gtaggattga aaacgctctc ctgattttcc
    15481 aattcatttt ctggataaat aaataattta tttttgtcac tattatttat gtaatcatcc
    15541 tgtcagggag agggatctca attatcaatg cttaattacg tcatcatttt gatgacatga
    15601 aaccggagca ttttgcatgg aattttcgtt ttcacccaaa cttcttgttg ttgctgtcgc
    15661 cgccgctctt cctctcatgg ccagcgcagc agataccccg tcaactgcca ccgcacgcaa
    15721 aggctttgcc ggatacgatc acccaaacca gtatccacag aacgctgcaa tttattgaat
    15781 ttgcacgatc atgtaggccg gataaggcgt ttacgccgca tccggcaatc aaccgcaggc
    15841 ggccacaaaa tggccgctat tttacttatt caccaccagc aaatgtgcct gcataatgtc
    15901 actggccggg cgaccgtgcg ccagcaaatc agccattgct ttaagatatg gcggtagatg
    15961 gcggaaataa cgctgatacc cggcacacaa ataattcagc cccggtttgc cgctggcatc
    16021 gagcatgaag cggtgtttcg ggcagcctcc ccagcacgct tttaacacgt tacaactgcg
    16081 acactgcgcc ggtaattgct taaatttatc ttcaccaaac acctgctgtt gcggggaatc
    16141 gatcatttct gcaattgttt gctgatgcat attccccagc cgatattgcg gataaacata
    16201 gtgatcgcag gcgtaaacgt cgccgttgtg ctcaacaatc accgagcgcc cacaggttgg
    16261 ctgatgatgg caaaccgcac ccggcgcacc gacaaaattg gcaaacgccc attcgatatt
    16321 catcacgaaa atcttgccga cgtcgcgttt gatccagtgg tcaaaaatcg ccaccagaaa
    16381 ttcaccaaat tcatcggggc gcacagacca ttccgtcagt tccccctgaa tatcaccagg
    16441 cgcatgtagt ttcagtccat cgctggcagc tgtttcatca gccaggcgct cgaccaccgg
    16501 aataaactgg atgaattcga ctcccgcatc gcacaaaaaa tcataaacct gcaacggttg
    16561 ctgcgcgctg gtgcggttga cgcagaccag cacgttatag tcgacatgat gtttttgcag
    16621 cagcgtcagg gcacgcatca ccagcttatg cgttggtctg ccacctttgg tcacgcgata
    16681 ttgattgtgg atctcagccg gaccgtccag cgataaccca acaagaaaat gattttctgc
    16741 cagaaatgca caccatttat catcgagcag cacgccgtta gtctggaagc tgttacttat
    16801 cttcctgcca gcaccgtatt tcgcctgtaa ctttacggca cggcggtaaa aatccagccc
    16861 gagtaacgtt ggttcgccgc cctgccaggt aaaagccact tcgttttgcg gttcgctggc
    16921 agcgatatag tgacggacat acgcttccag cgtgtcatcg tccatatgcg tgactggctt
    16981 ttcgcggtaa agggattgtt tttcgagata aaaacagtag tcacagttca gattacaatc
    17041 ggaaccactc ggtttcgcca tcacatgaaa agcacgcgtt ggaacctgtt gcagcatggt
    17101 cactccttgc ctgaagtcat ccttcaatac gttaagggcg aaatcatacc gtggggcaat
    17161 gagttattac gggcgtttat tgcgaagaga gggtgacgaa atgcacagaa aacaaaaaac
    17221 cccgccgaag cggggttcaa aattggtcgg cgagagagga ttcgaacctc cgacccactg
    17281 gtcccaaacc agttgcgcta ccaagctgcg ctactcgccg aaatactgct ttttgaattt
    17341 ttagttcaat tatttaaagt cgtggtgcga ggggggggac ttgaaccccc acgtccgtaa
    17401 ggacactaac acctgaagct agcgcgtcta ccaattccgc caccttcgca ttgtcacaac
    17461 ttctaataat ggggtggcta atgggattcg aacccacgac aactggaatc acaatccagg
    17521 gctctaccaa ctgagctata gccaccacta caaatcttgt tacgcggtat tactaccacc
    17581 gcagctcaag cgccgggact aaatggcgcg cccgacagga ttcgaacctg agacctctgc
    17641 ctccggaggg cagcgctcta tccagctgag ctacgggcgc ttagcgccgt tgcgggggtg
    17701 gataatacgg acttcccacc cctctgtcta gtcccttttt aaataaattg cgcgtttggt
    17761 tacggtttgt gcgttttgct gcttattcct ccagtttatg cgctttcccg tggcgattaa
    17821 ggccaaaaac tttataaatc gccgtcaccg ccagcataaa gatgatgcca acaaacagcg
    17881 acatacgcgt atcttcatta aagtacatgc cgatcaaaac gcaaatcagg aatgccattg
    17941 ttacgtagtt ggcccacggg aacaggattg agcggaacgg atggctggca atcgccgctt
    18001 tatgtgcacg ccgaaaacgc agctggctta tcaatatcac aaaccatggc accatccccg
    18061 gaagcacgct ggcactgtag acgtagacaa acacacgctg cggattggga atgatgtagt
    18121 tcaggcatga gccaattagc agaatagcaa tagatactgc cacacccgca actggtacgc
    18181 cgtgacggga aactttcgcc atcgccgccg gtaactgacg gtttttcgcc agtgcgtaga
    18241 gcatacgtcc gcaactgtac atgccgctgt tacagccaga gagcgcagcc gtcagcacca
    18301 caaagttgat aatgcccgcc gctgcggtaa taccgatttt ggcaaaagtc agtacgaacg
    18361 ggctgccgtt gctgccactt tcattccacg ggaagatggt gacgataacg aaaatcgcgc
    18421 ctacgtagaa aatcaggatc cgccacagca ctttgcctac ggcactgcgc aacgtcacct
    18481 gcggattctt cgcttcaccg gcagtaatgc caatcagctc cacgccctgg taggacgcca
    18541 ccacaataca cagcgcggtc aggaaccctt tccagccacc cgcaaagaaa ccgccatgct
    18601 ctgtgagatt gctaaaacca atcgactgcc cgccattgcc aaagccaaag aaaatcacgc
    18661 ccaggccaat gacaatcatc acgataatcg tggtgacttt gatcatcgcg aaccagaact
    18721 cgatttcgcc gtacaaccgc accgccgcca gattcgccaa cgccaccagc gccactgcga
    18781 tcaatgcggg tatccactgc gccatctccg ggaaccagaa ctggacataa acgccaacgg
    18841 cggtgatttc tgagatcccc accgccatcc acataaacca ataagaccag gcggtgagat
    18901 aaccaaagaa cgggctcata taacgatgcg cataaacggc gaacgaaccg gtaaccggtt
    18961 cgaggaacaa catttcgccc attgaacgca tgatgaaaaa gacgaatagc ccggcgatga
    19021 tataggccaa caatacggat ggcccggccc atttcaaggt actggcggcc cccataaaca
    19081 ggccgacgcc aatggtgccc cccagggcga tgagttcgat atgtcgagct tccagcccac
    19141 gctgtagctc tggtttgtta tctgccataa atcctcgtgt tgtgtttgca tgctttccgg
    19201 tgttaccggt tatcgttatg ggtacatcga gtgttgcgaa tgttttcgta attcaggaga
    19261 aatggcaaat aaagcattaa aaatttgaat gctttgtgta ataaaaaagc agacaggcga
    19321 cggagtgacc actccgtcgc tttacaaaga gaggaaaatc agaggttgcc ggtgtagtgc
    19381 cagcgtaaat aacgcagcaa acgaagctga cgcttaatgc ggctcggctg cgaaagcagg
    19441 cggtagagcc actccagtcc cagcgtttgc cagattttcg gtgcgcgttt tacgtgaccg
    19501 gtgaaaacat cgtaagtccc gccaacgccc atatacagcg catctggatg caccagacgg
    19561 cagtcgcgca tgaagatctc ctgctttggc gatcccatcg caacggtgac gatttgcgct
    19621 ccgctggcat gaatgcgttc aaacagcgcc tgacgctgct cgggtttaaa ataaccatcc
    19681 tgactgccaa cgatattcac attccactgg ttgcgcagtt tagcttcagt ttgcgccagc
    19741 acttcaggtt taccgcccac aagaaatacc ggcgtccctt ctttgcctgc gcgcgccatc
    19801 agctcttccc agagatcggc accggcaacg cgggaaacct gcgcctgcgg gtacttttta
    19861 cgtactgaac gtacaacgct gatgccatcc gcatatttaa attcggcagc gttaattaac
    19921 tccctgacct cggcgttatc ttcaatggtc agcatttttt cagcattaat ggcaaccagc
    19981 gttccctgct taagctgccc gtcagcaaac agataatcga gggcgtgctg catatcacgc
    20041 caaccaatca actgtaagcc acgcagcgta taggtcggtg ccgtggtgtt gttattcatt
    20101 gttatccttc aacctgcgtc cggagcgatg attttgtacg tttatgaatg agtccggcgc
    20161 tttcaaaaag ccagtacaac agttttgcga tcatcagaca tgcgccgaag accacgataa
    20221 aaaagactac gcgtgagaca aacgaatcca gcccttcacg tgccagcacg atcatattga
    20281 agatcgcccc aaagcagaaa ctgtgcaata tcgcagcctt atagcgatta ggctcgcggt
    20341 tgcccagctc atacagccag tcgaaccatt tgatgatcag accaaccacg atcgccccga
    20401 gcgggatgaa caacgcgccg cccatcacca ccagtgagcc tataagcgta ggcgagatcg
    20461 ccagtccgga gtggttattc agcacttccc tggtaaagta gttggctgag ttcagcacca
    20521 tactcgggcg acccggccac agccaggaag ggataaagac atagaaatcg cggacaattg
    20581 gagccaggcc ctggaagtcg atgttgtcgt agttctgcaa cagcaacgcc agattctccc
    20641 acggcgagaa ggtgtcgcga gtgagataga gaaacgtata gaacgcttca tcgccgctca
    20701 cattcattcc atagcgtttt agcgccagcc agaacatgcc cacaatcccc agcacgcccg
    20761 ccgccgccag catccacaac gaaatccagc cgcgaataat gccaataaac aggaagatag
    20821 cgaatgcgat gatgatattg gcgcgagtgc cgccgacaat catataagtc agcaagccaa
    20881 aggcgaccgt gctgacgagg aaaaacagcc acgctttgct atcctggcgc agaaagtaga
    20941 ccaccagcat cgccgggatg aaaaagtaaa agaagcgttt taacgccacg ccggagactt
    21001 cactggagaa gatctgactg taggagttaa gccggaacag caaaaagccg ttgtgcatga
    21061 agaagatgcc gacgcttacc agcgcgatgc ccatcaggat cacccacgta agattggtct
    21121 ccacgcggtt catggtaaac agcggacggc gcggtacatc agcaacgcgt ttgcgtaggc
    21181 gggttttgta ggtgacatag taaaccgcgt agaagcagcc cgcagaaagc aacgcctgca
    21241 acaagatttc tggcggcgcg acaccaacat caaagcgaaa taccagcacg ctggtcagcg
    21301 ggaagccgaa gaaaaaggtg agcaaaaaca gcaatgaaaa gaagacattg aagttaaagc
    21361 gcacacggcg aaactcaaac caagtcagcg tggcaataaa cagcgtgcag agcagccaga
    21421 ccacaaacag gccactgaat tgcagcagac tcatgcgacc tccccggcgg caatcgccaa
    21481 cacccgctgc cagccttgta gatagttagg gctaaagaag gcaatggtgt ttttatccac
    21541 cgacgccaac tggcgctgcg cttcacgcac aatatcctcg ttgagatcgt cggtagtaaa
    21601 cagcaccggc aaatgctgtt ccgtcatatc ctgccagaac ggattttccc ggttaagcac
    21661 acaaggaatg cccgcctgaa tcagtaagca aagcgtacca atgccctgct ggcgggcaaa
    21721 aataaagtaa ccaagatcgc actgacgaag tagcgccaga taggcgtcaa attccagttt
    21781 ttcgctcaaa atttgcagat tttcttcgct gaataactcc agccccgcct gacgaacttc
    21841 ctcaatgtac gcttcgttat taggcggata tcccatcggc accaccactt ttaccgtatc
    21901 gccaaattgc tgatgaacgg cgcgcaaggc agcaatatgg tcattgctgc ggtcaccgga
    21961 gttccccacc agaatggtca ttttcccttc acgttgccga tcgttcgcca tcgtattgag
    22021 agaagggtcc atccgcgtcg ggaagtacag cagttcgccc cgcacctttg gatgcgtttt
    22081 ggcaaaaaag ctcaaatcac cgcgggtggc aaatacacag ccgactcgct tttgcgccag
    22141 gcgacgtagc gggtaaaaaa gcttatatct caagccactg gaaagctcat acaggtctgc
    22201 cccccagata tgccagaaaa actggctggg cttaatgcca ccactcagca gagccagcca
    22261 cagtgtggga ttgaactgac cgtggaaaaa aaatcgctgc tgacggttag cttttgcttt
    22321 cgcgatgacc gcttccgcca gcgatttttt cccagggaaa aattgcacag aaagcgccgg
    22381 acagctatca cttaagccgt cgtccttgcc aacaaccata aactcgcgcg cgtgctcgct
    22441 cgtcgcggcc agcgcgtcat tgaaaaaccg caaaacggtt cggttatggt gagggatatc
    22501 cgatcccagt acgtgaatca gtacagtcat gcccgcctac gccagagtaa aaacacgcca
    22561 caacaaagag aaaaatagac gatataagtt gccatatatg cctgcgccgc gcccagtgca
    22621 ccatgcgcag ggattagcca gtgggcaaat accatcaata aagtgaactg gctgacttcc
    22681 gccagaatat aaaaccgcag tgacgctttg gcgatcacca gataaccaaa gacataagcg
    22741 cccactttta gcacatcacc cactaactgc caggcaaaga gatcgcgcat agcggtaaat
    22801 ttattcgaca acagcaacca gatagcaaaa tcacgcagca accagacggt aaaactcgcc
    22861 gccgccactg ccggtaagac gaattttagc gatttaacca cttcccgggt gatatcgcgc
    22921 ttttccgtta gccgcgacaa cgtgggcagc aaatatacgc tgaacgatgc cgtaatgaat
    22981 tgcaggtagg catcggaaat actgctcacc ccttgccaga tccccacttc atcccagcta
    23041 tactgcgccg ccagcagttt acgcatcatg atgtaagcaa caggcaaggt caccgacgta
    23101 atcaacgcca tgagcgtaaa tttgctcaac tgccctgcca gaccgttatc ccagctgggt
    23161 ttcagatagc ttaacgggat gacaccacgt ttgatcaaca tgatggcggc aggaattacc
    23221 accagcgcgg gaatcagcgc cagacccagc aacgcccctt cataaccgcc caaacggtaa
    23281 ctgacgtagt acgcgagaac gccaatcaag ctgccgacaa tcagcgataa cgcattacct
    23341 gcggcatcgc gaaagccttt catcagcgcc agtaacaggt tgccccaggc gatccccatt
    23401 tgcaccagcg ccactaaacg caccagcccc tgatagtcgg tattaccaaa caatccctgg
    23461 ctgattggcg cagctgccag cacaaaaacc agcgccatca gcgtagagaa accaagtacc
    23521 atcgctgatg aagtgccgac cacgcggcgc agctgttgcg gattatcatg gtactgggca
    23581 acgtatttgg ttacaccgtt aaagatgcca gccccggcaa gcacgccgag cacggtaatc
    23641 aactggcgga aatttgccgc cagcccaagc cccgccggac caaatgacac cgccagcaac
    23701 ttaccgacca gtaacccggc accaatcttg accagtgtac tggccgccgt ccacaaggac
    23761 gcttttgcca acgacatatc aggagaagta gttcaacaaa gtcgcaatta ccgtacgctg
    23821 attgacgggc gacaggttgt agaacagcgg caggcgcagc aggcgctcgc tctctttggt
    23881 ggtgtagcga tcttcaccgt ggaactcacc aaagtgttcc cccgcagggc aaccgtgcag
    23941 cggaatgtaa tgaaacaccg ccatgatttc cgcttctttc agaaagttaa tcaacgcgct
    24001 ccggtcatca atatcccgca gtttaatgta gaacatatgc gcgttctgca cgcagccatc
    24061 aggaatcgac ggcagctcga tacgcccggc tttcgccaga ggcgctaacg catcgtagta
    24121 attttgccac agcgccagac gttgctggtt gatacgatcc gctgcttcca gttgcgccca
    24181 caggtatgca gcttgcagat cggacatcaa atagctggag ccaatatcgc gccaggtata
    24241 tttatcgacc tgaccacgga agaactggct gcggttagtg cccttttcac ggatgatctc
    24301 ggctcgttcg attaacgctt tatcgttaat cagcgtcgcg ccgccttcac cacccgccgt
    24361 gtagtttttg gtttcatgga agctaaagca gccaatatga ccaatggttc ccagtgcacg
    24421 ccctttgtaa gtggacatca cgccctgagc ggcatcttcc accacaaaca aattatgctt
    24481 tttcgccaac gccataatgg tgtccatttc gcaggccaca cccgcgtaat ggaccggcac
    24541 gataacgcgc gttttgtcgg tgatcgctgc ttcaatcaac gtttcgtcga tgttcatggt
    24601 gtccgggcga acatccacaa agacgatttt cgcgccacgc agcacaaagg cattggcggt
    24661 ggagacaaag gtgtagctcg gcatgatcac ttcatcgcca ggctggatat cgagcagcag
    24721 cgccgccatc tccagcgaag cggtgcagga cggcgtcagt aacactttgg cgctgccaaa
    24781 acgttgctcc agccactgct ggcagcgacg ggtaaaaccg ccatcgccac acagtttgcc
    24841 gctacccatt gccgactgca tatagtcgag ttcggttccc accaccggcg gtgcgttaaa
    24901 tggaatcatg tgatcacctg tataaccagt acgcggtgct ttctacattc gcaccacttt
    24961 gtatgtatcg tttaagcgcg gcggtgttgc ccatttgggt cgccacccgc aaagttgttt
    25021 taccgcgagc atacgcccag tttagcgccg tttgcatcag ctcagcacct gcaccgcgtc
    25081 cagccagcag gccaattcgc gcatctgtcg cattgagttc ccgtaaagag acatagccgc
    25141 gaatatcgcc ggacgccgca cgtagaatca gacattgatg atcaaaggtg ccgcgcacgg
    25201 cattttcaat ccactgtgca taaaagcgac cgctggcgtc aggcgcatac cacggcgcac
    25261 gaaaacggct ttgcgcaaat gcggcgctag ctaactgacg taatgcggga atatcggtct
    25321 cttgtgccac gacagcaccg ctatcactga cattgttcac gggtagcgcc aaatcaactt
    25381 caccttctac cagggagaat cccagctgtt gcagggcatc cagttcaccc gtatttgatg
    25441 ccgcaatttt ggcctgcacc cgtgaccacg gcgctaacgc gtctggcgtc aggagcggtg
    25501 cttcagacgt aatgcgcacg atggcgctgt taacaccaaa gaaggcgttt tcccaggtta
    25561 gtggctcaat actggcgcgg acgggcacga agtaactcca gcagatattg gccgtagcca
    25621 gttttcgcta atgaactggc agcacgcttc acaccctcgt catcgagcca gccgttacgc
    25681 caggcgatct cttccaggca ggcaatctta aagccctggc gtttttctac tgtctgcaca
    25741 aaggtactgg cttcaatcag gctgtcgtga gtgccagtgt ccagccaggc aaatccgcgc
    25801 ccgagcagtt caacggtcag gttgcccgcc tcgaggtaca tctggttgat ggaggtaatc
    25861 tccagttcac cacgctccga cggcttcacc tgctttgcgt actccacgac tttactgtcg
    25921 tagaaataaa gcccggtcac cgcccagttt gacttcggct gttttggctt ttcttccagc
    25981 gagatagcgc ggaaattgtc gtcaaactcc accacgccaa agcgttcctg gtccatcacc
    26041 tgatagccaa ataccgtcgc cccttccgtg cgcgccgcaa catgacgcag cttcggactg
    26101 aagccctgac cgaagaagat gttatcgccc agcaccagac aagaaggttc accgttgagg
    26161 aaggtttcac cgatgataaa ggcctgcacc agaccgtccg ggctgggctg ttcggcgtat
    26221 tccagctgga taccgaactc actaccatcg cccagcaggc gctggaaata acctttatct
    26281 tccggcgtag tgatgatgag aatttcgcgg ataccggcca acatcagcac cgacagcgga
    26341 tagtaaatca ttggcttatc gtaaatcggc aacagttgct tcgatacgcc gcgcgtaatc
    26401 ggatgcaatc gggtgccgga accgcccgcc aggataatac ctttcatgtt tgcctccgct
    26461 gaaaattagc ctttcagacc taaacgctcg ccctgatagc tgccgtcctg cacctgcttc
    26521 caccagcttt cattagccag ataccactgc accgttttac gcattccact ttcaaaggtt
    26581 tcctgtggca gccagccaag ttcacgggca attttcgaag catcaatggc ataacgcaga
    26641 tcatgccccg gacggtcagc gacaaaggtg atcaagtcac gatagtgcac cacgccgtgc
    26701 ggcttgttcg gagccagttc ttccagcagc tcgcaaatgg tttccacaac atcgagattc
    26761 ttacgctcgt tgtgaccacc aatattatag gtttcaccga ctttcccggt ggtcgccacg
    26821 caatacagcg cgcgggcgtg atcttccaca tacagccagt cacggatttg ctgcccgttg
    26881 ccatataccg gcagcggttt acccgccagc gcgttgagga tcatcagcgg gatcagtttt
    26941 tccggaaagt ggtaaggacc gtagttattc gagcagttgg tgataagcgt cggcagaccg
    27001 taggtccgca gccaggcgcg caccagatgg tcgctgctgg cttttgacgc ggaataaggg
    27061 ctgctcggcg catacggcgt ggtttcggtg aagaaatcat ccgtcgagtg caggtcacca
    27121 tatacttcgt cggtggagat atgatgaaaa cggaacgctg attttttatc ttccgtcagc
    27181 gtattccagt aagcccgcgc cgcttcaagc aatgtataag tcccgacaat gttggtttca
    27241 ataaacgctg ccgggccgtc aatagaacgg tcaacatggc tttcggctgc cagatgcatg
    27301 acacagtctg gctgatgctc agtgaatacg cgtgccagtt ctgcccgatc gcagatatca
    27361 actttctcaa aggcaaagcg atcgctttgc gcgaccggtg ccagcgacat caggtttccg
    27421 gcgtagatca gcttatcgac cactaccacc gcgtcgctcg tttcgttgat gatataacgc
    27481 accagcgccg agccaataaa cccggcacca cctgttatca gaatttttct catcagcgcc
    27541 agactccttt ggcatcgacg acatactgct gatggacatt gtcgccattg ataactttaa
    27601 actgactatg atcgaccagc atcaccagca cgtctgccgt tgccagcgcc tcgtcaagct
    27661 gcgccagagt acaaagcccg gtcagttttt tcggcaactg gtggatgtta ggctcaacaa
    27721 ccagagtttc gccgctatgc cactgggcga tcagttcagc gatttccatc gccgggcttt
    27781 cgcgcaggtc atcaatattc ggtttaaacg ccagaccaaa gcaggcgatt ttcagttcac
    27841 tggcgcgttt atcggtagcc gccaggcaat cagccaccgc cgctttcacc tgatcgataa
    27901 cccagaacgg tttgtgatcg ttcacttcgc gcgcggtacg gataagccgc gcctgctggg
    27961 ggttctgtgc cacgataaac cacggatcaa cagcaatgca gtgaccgccc acgccagggc
    28021 caggctgaag aatattaacg cgagggtgac gattcgccag gcgaatcagt tcccagacgt
    28081 taatcccctg atcggcacaa atcagcgaca attcattagc aaaagcgata ttcacatcgc
    28141 ggaagctgtt ttcggtgagc ttacacattt ccgccgtccg cgagttagtg acgacacact
    28201 caccttcgag gaaaattttg tacagttcgc tggcgcgggt cgaacaaacc ggcgtcatac
    28261 caccaatcac gcgatcgttt ttaatcagct cgaccataac ctggcccggt aacacgcgtt
    28321 ccgggcagta agcaatgttg acgtccgcct gctcgcccac ctgctgtggg aaagtgagat
    28381 ccggacgcat ctctgctaac cattctgcca tcttctcggt tgaccccacc ggcgaggtgg
    28441 attcaaggat caccagcgcg ccttttttca gcactggcgc aatggagcga gcagccgatt
    28501 caacgtaggt catatctggc tcatgatcgc ctttaaacgg cgtgggtaca gcaatcagcc
    28561 aggcatccgc ttcaactggc gtcgtgctcg ctcgtaaaaa accgccttct acggcagttt
    28621 ttactacgct cgccaaatca ggctcgacga tatggatttc gccacgattg atggtatcaa
    28681 ccgcgtgttg gttgatatcg acaccaatca cctgtttttg ccgtgaggca aacgctgctg
    28741 ctgtaggcag cccgatgtaa cccagtccga taacagaaat ggtcgcaaaa ctcatagtga
    28801 tatccgatta ttttttaacg cttccagaat gcgagagcat gcctgaccat caccatacgg
    28861 gttatgggcg cggctcatag tttgatattc gttttcgtct tttaaaagac gcgtcacttc
    28921 ctcgacaatt cgctgcttat ccgtgcctac cagacgcacc gtacccgccg tcaccgcttc
    28981 cggacgctca gtggtatcgc gcatcaccag caccggtttc cccagcgaag gcgcttcttc
    29041 ctgaatgccg cctgagtcgg tcaaaatcag ccaggcgtgg ttcatcaacc agacaaacgg
    29101 taaatactcc tggggatcga tcagaatgac atttttcaca tgccccagaa tgcgattgac
    29161 cggctctctg acgttcgggt tgagatgcac cggatagaca atctggatgt cctggtgcgt
    29221 ggtggcaatg tctgccaacg cgtggcagat ttcttcaaaa ccacgaccga aactctcacg
    29281 cctgtgaccg gtcaccagaa tcatcttttt attggggtcg ataaacgggt aatttgccac
    29341 cagttctgaa cgcagcgtgt cgctgctcat cacctgatca cgcacccata acagtgcatc
    29401 aatgactgta ttaccagtaa tgaagattcg gctatccgca acgttttcac gcagcaagtt
    29461 ttgccgggaa gtttcggttg gagagaagtg atacatcgcc agatgcccgg tcaatgtacg
    29521 gttagcctct tccggccacg gcgaatagag atcgcccgtg cgtaaaccag cctcaacgtg
    29581 accaacagga atacgctgat aaaacgccgc caggctggtt gccagcgtcg ttgttgtgtc
    29641 gccgtgaacc agcacgacgt ctggtttgaa ctcggcaaga ataggtttta gcccttccag
    29701 aatccgacag gttatctctg tcaggccctg tcctggctgc attatgttga gatcgtagtc
    29761 aggtacaatg gaaaagagtt tcagcacctg atcgagcatc tcccgatgct gcgcagtgac
    29821 gcaaacttta gcctcaaaaa aaggagcttt tgccaacgca tgcaccaacg gagccatctt
    29881 gatggcttcc gggcgcgtac caaatacagt cagtactttc acatcgattc tcttcgaata
    29941 agcggcgagc gcctttgcgc tcgccgcagc agtgttgcta tttcgagcaa cggcgggtta
    30001 atgcgacacc agccccgatc agccccccga caatgcccca cataatcatc aggaaggcac
    30061 gacgtgggct atcgcgtttt accggttctt ccggcgtacg caaatagcga taggtctgaa
    30121 aacgcggatc cagggttgga ccaacattca gggtgtttaa catggcccga ttctgatcat
    30181 agtcgagatc aaaggccgga ccgacggcct gtaaattttc cagtcgagcc tggagcattg
    30241 gacgcccaag caggaacatt tctgaatcag gtaattcctc ggcaggcaca tctgtcgcac
    30301 tgcgcgaaat attatgctgc tcagcaattt tcagcgcctg ctcaatgctg ttcatccggc
    30361 ggtcgtagat ggctttcgcc acctcttcct gacgcttcac ctgagctttc atctggatgg
    30421 tgcgtgccgc ccatgcgcct ttcagctcat cattcagatg gctggctgca cgctggctgg
    30481 caaaagcaac atactgacgt aacaggttat tagcgtcagg cgcggtttcg gcaataagct
    30541 tcacgctgtc attgaccgcg cgggtaaagt ctccggggat aaactggatg ttgttaatca
    30601 tttcatccag caacgccgca tcggctttgc tgttgcccac catccgctgt ttgtaatagt
    30661 cggtttgcag ccagaactct ctgcgggtat cccacgaggc cagttgcata acaaactctt
    30721 tataggcttc gtccatgacc gatggttgat cggcagaagc catgtttgaa cggacatcca
    30781 ggttacgcaa aaattgctgc tgcgagtaat atccccccag catattcacc gttggacgat
    30841 cggtaatcgc cgtcgagctc cactcctgac gagcaaaaaa agtatacgcc agcgcgatta
    30901 acgcaaacgc cagccccatg ccaataatcc atagcttccc agcccacaag gtacgaaaca
    30961 acccacgaat atccagttca ttttcagcgt cttcggccgg tttcccaggc attggttgtg
    31021 tcatcacatc ctcatttatt tggttaaatt ggggctgcca ccacgatttc tacgcagtct
    31081 gcgttttacg cgcttaataa agcgagcaac tttccaggca cgcttaatgc aatatccata
    31141 gaggaagaat gctagcaaaa agagcaccag catgacccac tccgggacaa aatgagaata
    31201 ttctgccagc acgccaatgg aagcgagcag tgctgcggca agggtaatca gcacaaacgc
    31261 ctgacgggaa gtaaacccgg cacgcatgat caaatggtga atatgctgac ggtcaggaga
    31321 gaatgggctc atgcctttac gcaggcgacg gtacataatc gccaccatat ccattagcgg
    31381 aatggcgatt atccacaaag cggtaaccgg gctgatggga tgggttttgc cctgggtcgt
    31441 ttcgagcagg atccagataa cggtaaaacc aatcagcgta ctgcccgcat cacccataaa
    31501 gactttgtag cggcgaccca ggataccaag gttaagcatg atgtatggca ggatggcggc
    31561 gatcatcgca aagcaccaga ttgcgaggct ggtttgcccg tcgaaccaca aaatcatacc
    31621 gattgctgca aacgagacgc aggacaaccc gcccagcaag ccatcaatgc catcaaccat
    31681 gttgaacgca ttaatggccg cccagacggc aaatagcgtc aggaagtaac caaacggtcc
    31741 gagcgccatc tcccaggagc caaagatata acccaggcta ctgagataaa gtttgccgaa
    31801 caccatcata acaatgccaa cagcggcctg tatggtggca cggattttta cgctgatatc
    31861 aaaacggtca tccagcgcgc caatgaaaac aagcacaccg gcacaagcga gatagagaga
    31921 tgcatgcgga atatagtaat cgacaattcc gaacgtgaag caaatccctg cgtaaaccga
    31981 aatcccccca acgagaggta tcaatccctg gtgacgtttg cggaagtttg gtttatccac
    32041 taaaccgact ttttttgcca ccttacgggc aaaaaacaga aacagtgtcg tgaataaaaa
    32101 aatactgatg agatcagtac tcactgtcag taaattcaca atgcatgctc tcagagaaaa
    32161 ttattagcag aagtataacc acgaagacct ttattcagaa gggaaagtcc gttccgaacc
    32221 caccagtcct gtgcaaaaat taaccatttg atatgcaaat tgcataacat gccagcaaat
    32281 tccaggaatt ttcctaacat cgccagcgcg gcattaagat tacagatata aaagcaaaac
    32341 gccacgtaaa cacgtggcgt ttttggcata agacaaattt atgagcgttt catcatttcg
    32401 aagaaatcgt cattggtctt ggtcatggcc agtttattaa tgaggaattc cattgcatcg
    32461 atttcgccca tcgggtgaat gattttgcgc aggatccaca ttttctgcag ttcttcctga
    32521 gtcgtgagca gctcttcttt acgggtaccg gaacggttgt agtcgatagc cgggaagacg
    32581 cgtttttcag cgatcttacg agagaggtgc agttccatgt tgcctgtacc tttaaactct
    32641 tcgtaaataa cttcgtccat tttagaaccg gtatcgataa gcgccgtcgc gataatggtc
    32701 aggctgccgc cctcttccac gttacgcgcc gcaccgaaga agcgtttcgg acgatgaagg
    32761 gcattggcgt ccacaccacc ggtcaacact ttacctgacg ccggaacaac agtgttgtaa
    32821 gcgcgcgcca gacgagtgat ggagtcgagc agaatgataa cgtctttctt gtgctcaacc
    32881 aggcgtttgg ccttctcgat caccatttcc gcaacctgaa cgtggcgaga tgcgggttcg
    32941 tcaaaggtag aagcaacaac ttcacctttt accagacgct gcatctcggt tacttcttcc
    33001 ggacgttcgt cgatcagcag aaccatcagc acacaatccg ggtggttgta agcaatgctc
    33061 tgagcaatgt tctgcagcag catagtttta ccggctttcg gcggtgccac aatcagacca
    33121 cgctgaccac gaccgatagg tgatgccaga tccagtacgc gagcggttaa atcttccgta
    33181 gaaccgttac cacgttccat acgcagacga gagtttgcgt gcagcggggt taagttctca
    33241 aagaggattt tgttgcgggc gttttcaggt ttgtcgaagt taacttcgtt aactttcagc
    33301 agcgcaaaat agcgttcacc ttctttcggc gggcgaatct taccagagat ggtatcacca
    33361 gtgcggaggt tgaaacggcg gatttggcta ggggaaacgt agatgtcatc aggaccggcg
    33421 aggtaggagc tgtctgcgga acggaggaaa ccaaatccat cctgcaatat ctccagtacg
    33481 ccatcaccaa agatatcttc gccactcttt gcgtgctgct tcaggatggc aaaaataatg
    33541 tcctgcttac gcatacgagc caggttttcc agccccatat tttcgccgag agtgatcagc
    33601 tcagaaaccg gcgtattctt taattcggta agattcatag tggtgtgagt tcttaaactt
    33661 ggggtaaatc tcgaacttaa tgttgtgaat ggtatggcag gatcatccat gcctgtttac
    33721 ggtcatcgac tcatgtcttt tcgctgcctg gtcacaggag agtacgcaga actgaaacga
    33781 caagacggat tgagtgacga gccagaaatc tgttcacttc gcatttaaga taaaacggga
    33841 agcgttggaa attacaagat tcaaacttaa taaggtatgt ttaatacgaa gtcaacacta
    33901 agttagcatg actcacgccg ggcgtccagt ttttaacgac ggggcacccg aacatgaaat
    33961 tcccttacgc caggttagcg tcgaggaact ctttcaactg acctttagac agtgcaccca
    34021 ctttggttgc cgccacttca ccgtttttga acagcagcag agtcgggata ccacggatgc
    34081 catatttcgg cgcagtgcca gggttttgat cgatgttcag ttttgcaacg gtcagtttgc
    34141 cctgatattc gtcagcgatt tcatccagaa tcggggcgat cattttgcac ggaccgcacc
    34201 actctgccca gaaatcgacg aggatcgccc cgtccgcttt gagtacatcc gtgtcaaaac
    34261 tgtcgtcagt caggtgaata attttatcgc tcatatataa ctccacagga ataagcctgg
    34321 cgtgttggtt tcgttgttgg tgtaacatta accaactaaa ggttgacttt atttcaccgg
    34381 atacgctttc gtaaagcaat agtaagctga tattctacca cactatgagc aaaacacatt
    34441 taacagaaca gaagttttcc gacttcgccc tgcatccgaa ggttgtagaa gtccttgaaa
    34501 aaaaagggtt tcataactgt acgcccattc aggcactggc ccttccgctg acgctggcgg
    34561 gtcgtgacgt agccgggcag gcgcaaaccg gtaccgggaa aacgatggcg tttcttacgt
    34621 caacgtttca ttatcttctc tctcatcctg cgattgccga tcgcaaggtg aatcaaccac
    34681 gtgccttaat tatggcaccg acgcgtgaac ttgccgtgca gatccatgcc gacgcagaac
    34741 cgctggcgga agctaccggc ctgaagctgg gtctggctta cggtggtgat ggctacgaca
    34801 aacagctgaa agtgctggaa agcggcgttg acattctgat tggcactacg gggcgtttaa
    34861 ttgactacgc caagcagaac cacattaacc tcggtgccat tcaggtggtg gtactggacg
    34921 aagccgatcg catgtacgat ctgggcttta ttaaagatat ccgctggctg ttccgccgta
    34981 tgccgcctgc aaaccagcgc ctcaacatgc tgttctccgc cacgctttcg taccgggtac
    35041 gtgaactggc gttcgagcag atgaacaatg ccgaatatat tgaagtggaa ccggaacaga
    35101 aaacgggcca ccgtattaaa gaagagcttt tctacccttc taacgaagaa aaaatgcgtt
    35161 tgctgcaaac gctgatcgaa gaagagtggc cagacagagc gattattttc gccaatacca
    35221 aacaccgttg tgaagagatc tggggccacc tggcggcaga tggtcatcgt gtcggtttgt
    35281 tgacaggcga tgtcgcgcag aaaaaacgtc tgcgtattct tgatgaattt acccgtggcg
    35341 atctggatat tctggttgcc accgacgttg ccgcgcgtgg tttgcatatt ccggcagtga
    35401 cgcacgtctt taactacgat ttacccgatg actgtgaaga ttacgttcac cgtattggtc
    35461 gtacaggtcg cgcaggcgca agcggtcact ctatcagcct agcgtgtgaa gagtatgcat
    35521 tgaatttgcc tgctattgag acctatattg gtcactcaat tccggtaagc aaatacaatc
    35581 cggacgcatt gatgaccgat ctgccaaaac cgctgcgcct cacgcgccca cgtacaggca
    35641 atggtccgcg tcgtactggc gctccgcgta atcgtcgtcg ttcaggttaa ataaaatgtc
    35701 atactcaaaa tcattcaaac tgtatcaaga tggcaagaga atgaatcccg atgagcatac
    35761 tgtagtaagt gattcaggtg aaagaatgca gccaacacag agacagattg aaggatgaag
    35821 agtatgggtt ccacctcgtc gctgtatgca gccattgatc tcggttcgaa tagttttcat
    35881 atgctggttg tgcgcgaggt ggctggaagc atccagacgc tgacgcgaat aaaacgcaaa
    35941 gtgcgtctgg ctgctggcct gaatagcgaa aatgccctgt ctaatgaagc aatggagcgc
    36001 ggttggcaat gtctgcgcct gtttgctgaa cgtctgcaag atatccctcc ctcgcaaatt
    36061 cgcgttgtcg ctacggcgac attacgtctt gccgtcaatg cgggtgattt tattgccaaa
    36121 gcgcaggaaa tcctcggttg tccggtacag gtgatcagcg gtgaagagga agcacgtctg
    36181 atttatcagg gcgttgctca cacaactggc ggtgccgatc agcgcctggt ggtggatata
    36241 ggcggtgcca gtactgaact ggtaaccggc acgggtgcac aaaccacctc gttgttcagc
    36301 ctgtcgatgg gctgcgtcac ctggctggaa cgctattttg ccgatcgtaa tctggggcag
    36361 gaaaattttg atgctgcaga aaaagcggca cgcgaagtgt tacgtccggt tgccgatgaa
    36421 ttacggtatc acggctggaa agtgtgcgtt ggtgcttccg gcaccgtgca ggcgttacag
    36481 gaaatcatga tggcacaggg gatggatgaa cgcattaccc tggaaaagtt gcagcaattg
    36541 aaacagcgag ccattcattg cggtcggctg gaggaactgg agattgacgg gctgacgctg
    36601 gaacgtgcgt tagtgttccc gagtggtctg gcgatcctga tcgccatttt taccgaactg
    36661 aatattcagt gtatgaccct ggcgggcggt gcgctgcgtg aaggcctggt ctacggcatg
    36721 ttgcatctgg ccgtcgagca ggatattcgc agccgtacgc tgcgtaatat tcagcgccgc
    36781 tttatgatcg atattgatca ggcgcagcgc gtagccaaag ttgcggctaa cttcttcgat
    36841 caggtggaaa aggaatggca tcttgaagca ataagccgcg atttgctcat cagcgcctgt
    36901 cagcttcatg aaatcggcct gagcgttgac tttaaacaag cgccgcaaca cgctgcttat
    36961 ctggtgcgta atctggatct tcccggtttt acccccgcac agaaaaaatt gctggcgacg
    37021 ctactgctca accagactaa tccggtcgat ctctcatcgc tgcatcagca aaatgccgta
    37081 ccgccgcgcg tcgcagaaca actctgccgt ttactccgcc tggccatcat ttttgccagc
    37141 cgtcgccgtg acgatctcgt gccagagatg acattacagg ctaaccatga actgttgacc
    37201 ttgacgcttc cgcaaggttg gctaacccaa catccgctgg gtaaagagat tattgctcag
    37261 gaaagccagt ggcagagcta tgtccactgg ccgctggaag tgcattaatg agtaagtgcc
    37321 ggatgcgatg ctgacgcatc ttttccggcc ttgattattt ccctcgtttt gccgccatca
    37381 tcgctttcag attcgccaga tggctttgcc ctttctgcat ccgttcttcg gcgctgacca
    37441 ctttgcgctc ctgttcccaa atcagatcat cctgcggcag ctccagcaaa aagcggctcg
    37501 gctccgggcg caccagctcg ccgtactgac ggcgttcttt acacagcgta aaggtcaatt
    37561 ccttctgggc gcgggtaatg ccgacatagg ccagccgccg ctcctcatcg atattatctt
    37621 catcgatgct gctctggtgc ggcaaaaacc cttcttccat accgaccatg tagacataag
    37681 gaaactccag cccttttgac gcgtgcagag tcatcagttg cacctgatcc agctcttctt
    37741 cactctcacc acgctccatc atgtcgcgca aagtaaagcg cgtcaccacc tgggtgagcg
    37801 tcatcggctc atccagttcg ctgccttcca gcatctccgt catccagcta aacagttggt
    37861 tgacgttctt catgcgcatt tcggcggctt tcgggctggg cgatgtttcg tacagccagg
    37921 attcataatc catgccgtgg atcagatcgc gcaccgcggc aatcggctcc cgctccgcca
    37981 gacgctggat ttctgccaac cagtgagtaa agcgggtcaa tgcttcataa ccacgtccgc
    38041 taagcgtctg actcaggccc atatcaaagc tggcggtaaa catgctttta ttgcgcgtca
    38101 tcgcccactc acccagcttt ttcagcgtcg ccgggccaat ctctctcttc ggcgtgttaa
    38161 cgatacgcag aaatgcgctg tcatcgtccg ggttagtcag cacgcgcaga taagccagca
    38221 agtccttgat ttcaggacga gagaaaaacg acgtaccacc agaaattttg tacgggatgc
    38281 ggttttgcat caggaatttt tcaaacactc gcgactgatg gttaccgcga taaagaatag
    38341 cgtaatattt gtactgcgtt ttattgacga agtgatgcgc aatcagttca ccagtgacgc
    38401 gctcggcttc atgttcttcg ttattcgcgc ttaaaacttt aagctctgtg ccgtaaccca
    38461 gttcggagaa cagacgcttc tcaaagacgt gcgggttatt ggcgatcagg atgttcgccg
    38521 ctttcaaaat acgtccggaa gagcggtagt tctgctcaag cttaatcacc ttcagcgccg
    38581 gaaaatcctg actcagcagc accaggtttt gtggacgtgc gccgcgccag gagtagatcg
    38641 actggtcgtc atcgcccacc acggtaaagc gcgcgcggct gcccaccagc agtttcacca
    38701 gttcatactg gctggtgttg gtgtcctgat actcatccac cagcagatag cgaattttgt
    38761 tctgccagcg ctcacggact tcttcattgc gttgcagcag caacgtcggc aataaaatca
    38821 gatcatcgaa gtcgagaaca ttgcacgctt tcaggtgtgc atcatacagc ccataacaat
    38881 gggcaaaaat acggtcccgc tcaccaatcg cactggctgc cgcctgggac ggtgttttga
    38941 gatcgttctt ccagttagag atggtcgaaa tcaactgttg caggagaact ttgtcatctt
    39001 caatcagccc ttcggtcaac tctttgagca acgccagctg atcggtatcg tcaaacagcg
    39061 aaaagttcgc cttcatcccc agcgccgcat actcacgctt gatgatatcc agccccagcg
    39121 tgtggaaggt tgagatcatc agcccacgcg cctctttgcg acccagcgtc tgtccgacac
    39181 gctctttcat ctcgcgcgcc gccttattgg taaaggtcac cgccgcgata tgtcgcgcct
    39241 gataaccgca accgcggatc agatgggcga ttttattggt gatcacacga gttttaccgg
    39301 aacccgcgcc cgccagcacc aggcaggggc cggtaacgaa ttcgacagct tgttgttggc
    39361 cggggtttag acgcataggt gtattgctca atcttcgaac ggggggagga ttgtagcaga
    39421 atcgcatttg aatgtgaccg cgtgtaagcc gctaaccggt tggctgcgga tgtttaaatc
    39481 agagagggaa gaccgaaacc ggagttcatc gtgaatccat tagacttaga aaatatcggg
    39541 tcgtaacgtt gtgttattac tttttcagag tttactaagg agaggtgtac tcgtggcgat
    39601 taatttcagt cctaaggttg gtgaaatact ggaatgcaac tttggtaact atcctgttag
    39661 ccagaatgga cagttcagca ccacgtatta cgatggccgc attcctcctg aaatgataaa
    39721 aaacaggtta
//
LOCUS       DADMJE010000015        39667 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.015, whole genome shotgun sequence.
ACCESSION   DADMJE010000015 DADMJE010000000
VERSION     DADMJE010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 39667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 39667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..39667
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.015"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(13..870)
                     /gene="murI"
                     /locus_tag="JN001_000745"
     CDS             complement(13..870)
                     /gene="murI"
                     /locus_tag="JN001_000745"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312925.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HAY9052067.1"
                     /translation="MATKLQDGNTPCLAATPSEPRPTVLVFDSGVGGLSVYDEIRHLL
                     PDLHYIYAFDNVAFPYGEKSEAFIVERVVAIVTAVQERYPLALAVVACNTASTVSLPA
                     LREKFDFPVVGVVPAIKPAARLTANGIVGLLATRGTVKRSYTHELIARFANECQIEML
                     GSAEMVELAEAKLHGEDVSLDALKRILRPWLRMKEPPDTVVLGCTHFPLLQEELLQVL
                     PEGTRLVDSGAAIARRTAWLLEHEAPDAKSADANIAFCMAMTPEAEQLLPVLQRYGFE
                     TLEKLAVLG"
     gene            complement(815..2663)
                     /gene="btuB"
                     /locus_tag="JN001_000746"
                     /pseudo
     CDS             complement(815..2663)
                     /gene="btuB"
                     /locus_tag="JN001_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418401.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent vitamin B12 receptor BtuB"
     regulatory      complement(2717..2907)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            3021..4121
                     /gene="trmA"
                     /locus_tag="JN001_000747"
     CDS             3021..4121
                     /gene="trmA"
                     /locus_tag="JN001_000747"
                     /EC_number="2.1.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uridine(54)-C5)-methyltransferase TrmA"
                     /protein_id="HAY9052068.1"
                     /translation="MTPEHLPTEQYEAQLAEKVVRLQSMMAPFSDLVPEVFRSPVSHY
                     RMRAEFRIWHDGDDLYHIIFDQQTKSRIRVDSFPAASELINQLMTAMIAGVRNNPVLR
                     HKLFQIDYLTTLSNQAVVSLLYHKKLDDEWRQEAEALRDALRAQNLNVHLIGRATKTK
                     IELDQDYIDERLPVAGKEMIYRQVENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELY
                     CGNGNFSLALARNFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNG
                     VREFNRLQGIDLKSYQCETIFVDPPRSGLDSETEKMVQAYPCILYISCNPETLCKNLE
                     TLSQTHKVERLALFDQFPYTHHMECGVLLTAK"
     gene            complement(4161..4520)
                     /locus_tag="JN001_000748"
     CDS             complement(4161..4520)
                     /locus_tag="JN001_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YijD family membrane protein"
                     /protein_id="HAY9052069.1"
                     /translation="MKQANQDRGTLLLALVAGLSINGTFAALFSSIVPFSVFPIISLV
                     LTVYCLHQRYLNRTMPVGLPGLAAACFILGVLLYSTVVRAEYPDIGSNFFPAVLSVIM
                     VFWIGAKMRNRKQEVAE"
     gene            complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="JN001_000749"
     CDS             complement(4520..5170)
                     /gene="fabR"
                     /locus_tag="JN001_000749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002460670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor FabR"
                     /protein_id="HAY9052070.1"
                     /translation="MMGIRAQQKEKTRRSLVEAAFSQLSAERSFASLSLREVAREAGI
                     APTSFYRHFRDVDELGLTMVDESGLMLRQLMRQARQRIAKGGSVIRTSVSTFMEFIGN
                     NPNAFRLLLRERSGTSAAFRAAVAREIQHFIAELADYLELENHMPRAFTEAQAEAMVT
                     IVFSAGAEALDVGVEQRRQLEERLVLQLRMISKGAYYWYRREQEKTAIIPGNVKDE"
     gene            5491..6891
                     /gene="sthA"
                     /locus_tag="JN001_000750"
     CDS             5491..6891
                     /gene="sthA"
                     /locus_tag="JN001_000750"
                     /EC_number="1.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418397.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Si-specific NAD(P)(+) transhydrogenase"
                     /protein_id="HAY9052071.1"
                     /translation="MPHSYDYDAIVIGSGPGGEGAAMGLVKQGARVAVIERYQNVGGG
                     CTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQ
                     GFYERNHCEILQGNARFVDEHTLVLDCPDGSVETLTAEKFVIACGSRPYHPTDVDFTH
                     PRIYDSDSILSMHHEPRHVLIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQE
                     MSDSLSYHFWNSGVVIRHNEEYEKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTD
                     SLALQNIGLETDSRGQLKVNSMYQTAQPHVYAVGDVIGYPSLASAAYDQGRIAAQALV
                     KGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMN
                     VGTLKILFHRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTM
                     AEAYRVAALNGLNRLF"
     gene            complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="JN001_000751"
     CDS             complement(6874..7791)
                     /gene="oxyR"
                     /locus_tag="JN001_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator OxyR"
                     /protein_id="HAY9052072.1"
                     /translation="MNIRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELG
                     VMLLERTSRKVLFTQAGMLLVDQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVG
                     PYLLPHIIPMLHQTFPKLEMYLHEAQTHQLLAQLDSGKLDCVILALVKESEAFIEVPL
                     FDEPMLLAIYEDHPWANRECVPMADLAGEKLLMLEDGHCLRDQAMGFCFEAGADEDTH
                     FRATSLETLRNMVAAGSGITLLPALAVPPERKRDGVVYLPCIKPEPRRTIGLVYRPGS
                     PLRSRYEQLAEAIRARMDGHFDKVLKQAV"
     gene            complement(8058..9431)
                     /gene="argH"
                     /locus_tag="JN001_000752"
     CDS             complement(8058..9431)
                     /gene="argH"
                     /locus_tag="JN001_000752"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HAY9052073.1"
                     /translation="MALWGGRFTQAADQRFKQFNDSLRFDYRLAEQDIVGSVAWSKAL
                     VTVGVLTAEEQAQLEEALNVLLEDVRARPQQILESDAEDIHSWVEGKLIDKVGQLGKK
                     LHTGRSRNDQVATDLKLWCKDTVSELLTANRQLQSALVETAQNNQDAVMPGYTHLQRA
                     QPVTFAHWCLAYVEMLARDESRLQDALKRLDVSPLGCGALAGTAYEIDREQLAGWLGF
                     ASATRNSLDSVSDRDHVLELLSAAAIGMVHLSRFAEDLIFFNTGEAGFVELSDRVTSG
                     SSLMPQKKNPDALELIRGKCGRVQGALTGMMMTLKGLPLAYNKDMQEDKEGLFDAFDT
                     WLDCLHMAALVLDGIQVKRPRCQEAAQQGYANATELADYLVAKGVPFREAHHIVGEAV
                     VEAIRQGKPLEDLPLDELQKFSHVIGEDVYPILSLQSCLDKRAAKGGVSPQQVAQAIA
                     FAQARLG"
     gene            complement(9492..10268)
                     /gene="argB"
                     /locus_tag="JN001_000753"
     CDS             complement(9492..10268)
                     /gene="argB"
                     /locus_tag="JN001_000753"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418394.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HAY9052074.1"
                     /translation="MMNPLIIKLGGVLLDSEEALERLFSALVNYRESHQRPLVIVHGG
                     GCVVDELMKGLNLPVKKKNGLRVTPADQIDIITGALAGTANKTLLAWAKKHQIAAVGL
                     FLGDGDSVKVTQLDEELGHVGLAQPGSPKLINSLLENGYLPVVSSIGVTDEGQLMNVN
                     ADQAATALAATLGADLILLSDVSGILDGKGQRIAEMTAAKAEQLIEQGIITDGMIVKV
                     NAALDAARTLGRPVDIASWRHAEQLPALFNGMPMGTRILA"
     gene            complement(10276..11280)
                     /gene="argC"
                     /locus_tag="JN001_000754"
     CDS             complement(10276..11280)
                     /gene="argC"
                     /locus_tag="JN001_000754"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HAY9052075.1"
                     /translation="MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKL
                     ISDLHPQLKGIVELPLQPMSDISEFSPGVDVVFLATAHEVSHDLAPQFLEAGCVVFDL
                     SGAFRVNDATFYEKYYGFTHQYPELLEQAAYGLAEWCGNKLKEANLIAVPGCYPTAAQ
                     LALKPLIDADLLDLNQWPAINATSGVSGAGRKAAISNSFCEVSLQPYGVFTHRHQPEI
                     ATHLGADVIFTPHLGNFPRGILETITCRLKSGVTQAQVAQVLQQAYAHKPLVRLYDKG
                     VPALKNVVGLPFCDIGFAVQGEHLIIVATEDNLLKGAAAQAVQCANIRFGYAETQSLI
                     "
     gene            11434..12585
                     /gene="argE"
                     /locus_tag="JN001_000755"
     CDS             11434..12585
                     /gene="argE"
                     /locus_tag="JN001_000755"
                     /EC_number="3.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine deacetylase"
                     /protein_id="HAY9052076.1"
                     /translation="MKNKLPPFIEIYRALIATPSISATEEALDQSNADLITLLADWFK
                     DLGFNVEVQPVPGTRNKFNMLASIGQGAGGLLLAGHTDTVPFDDGRWTRDPFTLTEHD
                     GKLYGLGTADMKGFFAFILDALRDIDVTKLKKPLYILATADEETSMAGARYFAETTAL
                     RPDCAIIGEPTSLQPVRAHKGHISNAIRIQGQSGHSSDPARGVNAIELMHDAIGHILQ
                     LRDNLKERYHYEAFTVPYPTLNLGHIHGGDASNRICACCELHMDIRPLPGMTLNELNG
                     LLNDALAPVIERWPGRLTVDELHPPIPGHECPPNHQLVEVVEKLLGAKTEVVNYCTEA
                     PFIQTLCPTLVLGPGSINQAHQPDEYLETRFIKPTRELIIQVIHHFCWH"
     gene            12937..15588
                     /gene="ppc"
                     /locus_tag="JN001_000756"
     CDS             12937..15588
                     /gene="ppc"
                     /locus_tag="JN001_000756"
                     /EC_number="4.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxylase"
                     /protein_id="HAY9052077.1"
                     /translation="MNEQYSALRSNVSMLGKVLGETIKDALGEHILERVETIRKLSKS
                     SRAGNDANRQELLTTLQNLSNDELLPVARAFSQFLNLANTAEQYHSISPKGEAASNPE
                     VIARTLRKLKNQPELSEDTIKKAVESLSLELVLTAHPTEITRRTLIHKMVEVNACLKQ
                     LDNKDIADYEHNQLMRRLRQLIAQSWHTDEIRKLRPSPVDEAKWGFAVVENSLWQGVP
                     NYLRELNEQLEENLGYKLPVEFVPVRFTSWMGGDRDGNPNVTADITRHVLLLSRWKAT
                     DLFLKDIQVLVSELSMVEAPPELLALVGEEGAAEPYRYLMKNLRSRLMATQAWLEARL
                     KGEELPKPEGLLTQNEELWEPLYACYQSLQACGMGIIANGDLLDTLRRVKCFGVPLVR
                     IDIRQESTRHTEALGELTRYLGIGDYKSWSEADKQAFLIRELNSKRPLLPRNWQPSAE
                     TREVLDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETL
                     DDLNNANDVMTQLLNIDWYRGLIQGKQMVMIGYSDSAKDAGVMAASWAQYQAQDALIR
                     TCEKAGIELTLFHGRGGSIGRGGAPAHAALLSQPPGSLKGGLRVTEQGEMIRFKYGLP
                     EITVSSLSLYTGAILEANLLPPPEPKESWRRIMDELSVISCDVYRGYVRENKDFVPYL
                     RSATPEQELGKLPLGSRPAKRRPTGGVESLRAIPWIFAWTQNRLMLPAWLGAGTALQK
                     VVEDGKQSELEAMCRDWPFFSTRLGMLEMVFAKADLWLAEYYDQRLVDKALWPLGKEL
                     RNLQEEDIKVVLAIANDSHLMADLPWIAESIQLRNIYTDPLNVLQAELLHRSRQAEKE
                     GQEPDPRVEQALMVTIAGIAAGMRNTG"
     gene            15771..17504
                     /gene="cptA"
                     /locus_tag="JN001_000757"
     CDS             15771..17504
                     /gene="cptA"
                     /locus_tag="JN001_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709755.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase CptA"
                     /protein_id="HAY9052078.1"
                     /translation="MHSTEVQAKPLFSWKALGWALLYFWFFSTLLQAIIYISGYSGTN
                     GIRDSLLFSSLWLIPVFLFPKRIKIIAAVIGVVLWAASLAALCYYVIYGQEFSQSVLF
                     VMFETNTNEASEYLSQYFSLKIVLIALAYTAVAVLLWTRLRPVYIPKPWRYVVSFALL
                     YGLILHPIAMNTFIKNKPFEKTLDNLASRMEPAAPWQFLTGYYQYRQQLNSLTKLLNE
                     NNALPPLANFKDESGNEPRTLVLVIGESTQRGRMSLYGYPRETTPELDALHKTDPNLT
                     VFNNVVTSRPYTIEILQQALTFANEKNPDLYLTQPSLMNMMKQAGYKTFWITNQQTMT
                     ARNTMLTVFSRQTDKQYYMNQQRTQSAREYDTNVLKPFQDVLNDPAPKKLIIVHLLGT
                     HIKYKYRYPENQGKFDGNTDHVPPGLSAEELESYNDYDNANLYNDHVVASLIKDFKAA
                     DPNGFLVYFSDHGEEVYDTPPHKTQGRNEDNPTRHMYTIPFLLWTSEKWQATHPRDFS
                     QDVDRKYSLAELIHTWSDLAGLSYDGYDPTRSVVNPQFKETTRWIGNPYKKNALIDYD
                     TLPYGDQVGNQ"
     gene            17719..18528
                     /locus_tag="JN001_000758"
     CDS             17719..18528
                     /locus_tag="JN001_000758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9052079.1"
                     /translation="MYHDISYLLSRLINGPVPDLAYQVDFPRLEIVLEGEFVDTGAGA
                     TLVPGDVLYVAAGGWNFPQWKTPTTTFSVLFGKQQLGFSVVQWDGKQYQNLAKQHVAR
                     RGPRIGSFLLQTLNEMQMQPQEQQTARLIVASLLSHCRDLLGSQIQTASRSQALFEAI
                     RDYIDERYASALTRESVAQAFYISPNYLSHLFQKTGAIGFNEYLNHTRLEHAKTLLKG
                     YDLKVKEVAHACGFVDSNYFCRLFRKNTERSPSEYRRQYHSQLTEKPTTPE"
     gene            complement(18515..18856)
                     /locus_tag="JN001_000759"
     CDS             complement(18515..18856)
                     /locus_tag="JN001_000759"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY9052080.1"
                     /translation="MAYLVAVTACVSGVAHTYMAAERLEKLCQLEKWGVSIETQGALG
                     TENRLADEDIRRADVALLITDIELAGAERFEHCRYVQCSIYAFLREPQRVMSAVRKVL
                     SAPQQTHLILE"
     gene            complement(18858..19736)
                     /locus_tag="JN001_000760"
     CDS             complement(18858..19736)
                     /locus_tag="JN001_000760"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418387.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[formate-C-acetyltransferase]-activating enzyme"
                     /protein_id="HAY9052081.1"
                     /translation="MTSSAGQRISCNVVETRLNDVARIFNIQRYSLNDGEGIRTVVFF
                     KGCPHLCPWCANPESISGKIQTVRREAKCLHCAKCLRDADECPSGAFERIGRDISLDA
                     LEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAGDAPAS
                     KLLPLAKLCDEVLFDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIPRLPLIPG
                     FTLSRENMQQALDVLIPLNIRQIHLLPFHQYGEPKYRLLGKTWSMKDVAAPSSADVAT
                     MREMAERAGFQVTVGG"
     gene            complement(19702..21999)
                     /locus_tag="JN001_000761"
     CDS             complement(19702..21999)
                     /locus_tag="JN001_000761"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY9052082.1"
                     /translation="MTNRISRLKTALFANTREISLERALLYTASHRQTEGEPVILRRA
                     KATAYILEHVEISIRDEELIAGNRTVKPRAGIMSPEMDPYWLLKELDQFPTRPQDRFA
                     ISEEDKRIYREELFPYWEKRSMKDFINGQMTDEVKAATSTQIFSINQTDKGQGHIIID
                     YPRLLNHGLGELVAQMQQHCQQQPENHFYQAALLLLEASQKHILRYAVLAETMAANCT
                     DAQRREELLTIAEISRHNAEHKPQTFWQACQLFWYMNIILQYESNASSLSLGRFDQYM
                     LPFYQASLTQGEDPAFLKELLESLWVKCNDIVLLRSTSSARYFAGFPTGYTALLGGLT
                     ENGRSAVNVLSFLCLDAYQSVQLPQPNLGVRTNALIDTPFLMKTAETIRLGTGIPQIF
                     NDEVVVPAFLNRGVSLEDARDYSVVGCVELSIPGRTYGLHDIAMFNLLKVMEICLHEN
                     EGNAALTYEGLLEQIRAKISHYITLMVEGSNICDIGHRDWAPVPLLSSFISDCLEKGR
                     DITDGGARYNFSGVQGIGIANLSDSLHALKGMVFEQQRLSFDELLSVLKANFATPEGE
                     KVRARLINRFEKYGNDIDEVDNISAELLRHYCKEVEKYQNPRGGYFTPGSYTVSAHVP
                     LGSVVGATPDGRFAGEQLADGGLSPMLGQDEQGPTAVLKSVSKLDNTLLSNGTLLNVK
                     FTPATLEGEAGLRKLADFLRAFTQLKLQHIQFNVVNADTLWEAQQRPQDYAGLVVRVA
                     GYSAFFVELSKEIQDDIIRRTAHQL"
     gene            complement(22050..22370)
                     /locus_tag="JN001_000762"
     CDS             complement(22050..22370)
                     /locus_tag="JN001_000762"
                     /EC_number="2.7.1.202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIB"
                     /protein_id="HAY9052083.1"
                     /translation="MTKIIAVTACPSGVAHTYMAAEARESAAKAKGWEVKVETQGSIG
                     LENELTAEDVASADMVILTKDIGIKFEERFAGKTIVRVNISDAVKRADAIMSKIEAHL
                     AQTA"
     gene            complement(22385..23464)
                     /locus_tag="JN001_000763"
     CDS             complement(22385..23464)
                     /locus_tag="JN001_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit EIIC"
                     /protein_id="HAY9052084.1"
                     /translation="MNELVQILKNTRQHLMTGVSHMIPFVVSGGILLAVSVMLYGKGA
                     VPDAVADPNLKKLFDIGVAGLTLMVPFLAAYIGYSIAERSALAPCAIGAWVGNSFGAG
                     FFGALIAGIIGGIVVHYLKKIPVHKVLRSVMPIFIIPIVGTLITAGIMMWGLGEPVGA
                     LTNSLTQWLQGMQQGSIVMLAVIMGLMLAFDMGGPVNKVAYAFMLICVAQGVYTVVVI
                     AAVGICIPPLGMGLATLIGRKNFSAEERETGKAALVMGCVGVTEGAIPFAAADPLRVI
                     PSIMVGSVCGAVTAALVGAQCYAGWGGLIVLPVVEGKLGYIAAVAVGAVVTAVCVNVL
                     KSLARKNGSSTDEKEDDLDLDFEIN"
     gene            23773..26274
                     /gene="ptsP"
                     /locus_tag="JN001_000764"
     CDS             23773..26274
                     /gene="ptsP"
                     /locus_tag="JN001_000764"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312903.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY9052085.1"
                     /translation="MALIVEFICELPNGVHARPASHVETLCNTFSSQIEWHNLRTDRK
                     GNAKSALALIGTDTLAGDNCQLLISGADEQEAHQRLSQWLRDEFPHCDAPLAEVKSDE
                     LEPLPVSLTNLNPQIIRARTVCSGSAGGILTPISSLDLNALSNLPAAKDVDAEQSALE
                     NGLTLVLKNIEFRLLDSDGATSAILEAHRSLAGDTSLRQHLLTGVSEGLSCAEAIVAS
                     ANHFCEEFARSSSSYLQERALDVRDVCFQLLQQIYGEQRFPAPGKLTQPAICMADELT
                     PSQFLELDKNHLKGLLLKSGGTTSHTVILARSFNIPTLVGVDIDALTPWQHQTIYIDG
                     NAGAIVVEPGEAVARYYQQEARVQDALREQQRVWLTQQARTADGIRIEIAANIAHSVE
                     AQAAFGNGAEGVGLFRTEMLYMDRTSAPGESELYNIFCQALESANGRSIIVRTMDIGG
                     DKPVDYLNIPAEANPFLGYRAVRIYEEYASLFTTQLRSILRASAHGSLKIMIPMISSM
                     EEILWVKEKLAEAKQQLRNEHIPFDEKIQLGIMLEVPSVMFIIDQCCEEIDFFSIGSN
                     DLTQYLLAVDRDNAKVTRHYNSLNPAFLRALDYAVQAVHRQGKWIGLCGELGAKGSVL
                     PLLVGLGLDELSMSAPSIPAAKARMTQLDSRECRKLLNQAMACRTSLEVEHLLAQFRM
                     TQQDAPLVTAECITLESDWRSKEEVLKGMTDNLLLAGRCRYPRKLEADLWAREAVFST
                     GLGFSFAIPHSKSEHIEQSTISVARLQAPVRWGDDEAQFIIMLTLNKHAAGDQHMRIF
                     SRLARRIMHEEFRNALVNAASADAIASLLQHELEL"
     gene            26286..26948
                     /gene="fsa"
                     /locus_tag="JN001_000765"
     CDS             26286..26948
                     /gene="fsa"
                     /locus_tag="JN001_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY9052086.1"
                     /translation="MELYLDTANVAEVERLARIFPIAGVTTNPSIIAASKESIWEVLP
                     RLQKAIGDEGILFAQTMSRDAQGMVEEAKRLRDAIPGIVVKIPVTSEGLAAIKMLKKE
                     GITTLGTAVYSAAQGLLAALAGAKYVAPYVNRVDAQGGDGIRTVQELQALLEMHAPES
                     MVLAASFKTPRQALDCLLAGCESITLPLDVAQQMLNTPAVESAIEKFEHDWNAAFGTT
                     HL"
     gene            26959..28062
                     /gene="gldA"
                     /locus_tag="JN001_000766"
     CDS             26959..28062
                     /gene="gldA"
                     /locus_tag="JN001_000766"
                     /EC_number="1.1.1.6"
                     /EC_number="1.1.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418380.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional L-1,2-propanediol
                     dehydrogenase/glycerol dehydrogenase"
                     /protein_id="HAY9052087.1"
                     /translation="MDRIIQSPGKYIQGADVINRLGEYLKPLAERWLVVGDKFVLGFA
                     QSTVEKSFKDAGLVVEIAPFGGECSQNEIDRLRGIAETAQCGAILGIGGGKTLDTAKA
                     LAHFMGVPVAIAPTIASTDAPCSALSVIYTDEGEFDRYLLLPNNPNMVIVDTKIVAGA
                     PARLLAAGIGDALATWFEARACSRSGATTMAGGKCTQAALALAELCYNTLLEEGEKAM
                     LAAEQHVVTPALERVIEANTYLSGVGFESGGLAAAHAVHNGLTAIPDAHHYYHGEKVA
                     FGTLTQLVLENAPVEEIETVAAFSHAVGLPITLAQLDIKEDVPAKMRIVAEAACAEGE
                     TIHNMPGGATPDQVYATLLVADQYGQRFLQEWE"
     gene            28336..28953
                     /locus_tag="JN001_000767"
     CDS             28336..28953
                     /locus_tag="JN001_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1287 domain-containing protein"
                     /protein_id="HAY9052088.1"
                     /translation="MKASLALLSLLTAFTSHSLKSPAVPPTVVQIQANTNLAIADGAR
                     QQIGNTLFYDPAYVRLTYPGGDVPQERGVCSDVVIRALRSQKVDLQKLVHEDMAKNFA
                     EYPQKWKLKRPDSNIDHRRVPNLETWFSRHNKTRPISKNAGDYQAGDIVSWRLDNGLA
                     HIGVVSDGFARDGTPLVIHNIGAGAQEEDVLFSWRMVGHYRYFVK"
     gene            complement(28980..29918)
                     /gene="yijE"
                     /locus_tag="JN001_000768"
     CDS             complement(28980..29918)
                     /gene="yijE"
                     /locus_tag="JN001_000768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine transporter YijE"
                     /protein_id="HAY9052089.1"
                     /translation="MSTGKLHTGSLMSAAGKSNPLAISGLVVLTLIWSYSWIFMKQVT
                     SYIGAFDFTALRCIFGALVLFIVLLLRGRGMHPTPFKYTLAIALLQTCGMVGLAQWAL
                     VSGGAGKVAILSYTMPFWVVIFAALFLGERLRRGQYFAILIAAFGLFLVLQPWQLDFS
                     SMKSAMLAILSGVSWGASAIVAKRLYTRHPRVDLLSLTSWQMLYAALVMSVVALLVPQ
                     REIDWQPTVFWALAYSAILATALAWSLWLFVLKNLPASIASLSTLAVPVCGVLFSWWL
                     LGENPGAVEGSGIVLIVLALALVSRKKKEAVSVKSI"
     gene            complement(29979..32159)
                     /gene="katG"
                     /locus_tag="JN001_000769"
     CDS             complement(29979..32159)
                     /gene="katG"
                     /locus_tag="JN001_000769"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HAY9052090.1"
                     /translation="MSTSDDIHNTTATGKCPFHQGGHDQSAGAGTTTRDWWPNQLRVD
                     LLNQHSNRSNPLGEDFDYRKEFSKLDYYGLKKDLKALLTESQPWWPADWGSYAGLFIR
                     MAWHGAGTYRSIDGRGGAGRGQQRFAPLNSWPDNVSLDKARRLLWPIKQKYGQKISWA
                     DLFILAGNVALENSGFRTFGFGAGREDVWEPDLDVNWGDEKAWLTHRHPEALAKAPLG
                     ATEMGLIYVNPEGPDHSGEPLSAAAAIRATFGNMGMNDEETVALIAGGHTLGKTHGAG
                     PTSNVGPDPEAAPIEEQGLGWASTYGSGVGADAITSGLEVVWTQTPTQWSNYFFENLF
                     KYEWVQTRSPAGAIQFEAVDAPEIIPDPFDPSKKRKPTMLVTDLTLRFDPEFEKISRR
                     FLNDPQAFNEAFARAWFKLTHRDMGPKSRYIGPEVPKEDLIWQDPLPQPIYNPTEQDI
                     IDLKFAIADSGLSVSELVSVAWASASTFRGGDKRGGANGARLALMPQRDWDVNAAAVR
                     ALPVLEKIQKESGKASLADIIVLAGVVGVEKAASAAGLSIHVPFAPGRVDARQDQTDI
                     EMFELLEPIADGFRNYRARLDVSTTESLLIDKAQQLTLTAPEMTALVGGMRVLGANFD
                     SSKNGVFTDRVGVLSNDFFVNLLDMRYEWKATDESKELFEGRDRETGEVKYTASRADL
                     VFGSNSVLRAVAEVYASSDAHEKFVKDFVAAWVKVMNLDRFDLL"
     gene            complement(32488..33378)
                     /gene="metF"
                     /locus_tag="JN001_000770"
     CDS             complement(32488..33378)
                     /gene="metF"
                     /locus_tag="JN001_000770"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HAY9052091.1"
                     /translation="MSFFHASQRDALNQRLAEVQGQINVSFEFFPPRTSEMEQTLWNS
                     IDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKDRTGLEAAPHLTCIDATPDELRTI
                     ARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAK
                     SAQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFK
                     QAKKFADMTNVRIPAWMAQMFDGLDDDAETRKLVGANIAMDMVKILSREGVKDFHFYT
                     LNRAEMSYAICHTLGVRPGL"
     gene            complement(33727..36159)
                     /locus_tag="JN001_000771"
     CDS             complement(33727..36159)
                     /locus_tag="JN001_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000110794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase II"
                     /protein_id="HAY9052092.1"
                     /translation="MSVIAQAGAKGRQLHKFGGSSLADVKCYLRVAGIMAEYSQPDDM
                     MVVSAAGSTTNQLINWLKLSQTDRLSAHQVQQTLRRYQCDLISGLLPAEEADSLISAF
                     VSDLERLAALLDSGINDAVYAEVVGHGEVWSARLMSAVLNQQGLPAAWLDAREFLRAE
                     RAAQPQVDEGLSYPLLQQLLVQHPGKRLVVTGFISRNNAGETVLLGRNGSDYSATQIG
                     ALAGVSRVTIWSDVAGVYSADPRKVKDACLLPLLRLDEASELARLAAPVLHARTLQPV
                     SGSEIDLQLRCSYTPDQGSTRIERVLASGTGARIVTSHDDVCLIEFQVPASQDFKLAH
                     KEIDQILKRAQVRPLAVGVHNDRQLLQFCYTSEVADSALKILDEAGLPGELRLRQGLA
                     LVAMVGAGVTRNPLHCHRFWQQLKGQPVEFTWQSDDGISLVAVLRTGPTESLIQGLHQ
                     SVFRAEKRIGLVLFGKGNIGSRWLELFAREQSTLSARTGFEFVLAGVVDSRRSLLSYD
                     GLDASRALAFFNDEAVEQDEESLFLWMRAHPYDDLVVLDVTASQQLADQYLDFASHGF
                     HVISANKLAGASDSNKYRQIHDAFEKTGRHWLYNATVGAGLPINHTVRDLIDSGDTIL
                     SISGIFSGTLSWLFLQFDGSVPFTELVDQAWQQGLTEPDPRDDLSGKDVMRKLVILAR
                     EAGYNIEPDQVRVESLVPAHCEGGSIDHFFENGDELNEQMVQRLEAAREMGLVLRYVA
                     RFDANGKARVGVEAVREDHPLASLLPCDNVFAIESRWYRDNPLVIRGPGAGRDVTAGA
                     IQSDINRLAQLL"
     gene            complement(36162..37322)
                     /gene="metB"
                     /locus_tag="JN001_000772"
     CDS             complement(36162..37322)
                     /gene="metB"
                     /locus_tag="JN001_000772"
                     /EC_number="2.5.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HAY9052093.1"
                     /translation="MTRKQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAH
                     DYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYG
                     GSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKIC
                     HLAREVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDV
                     VTELAWWTNNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLY
                     HPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLI
                     SHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAANKG"
     gene            37599..37916
                     /gene="metJ"
                     /locus_tag="JN001_000773"
     CDS             37599..37916
                     /gene="metJ"
                     /locus_tag="JN001_000773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015855437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="met regulon transcriptional regulator MetJ"
                     /protein_id="HAY9052094.1"
                     /translation="MAEWSGEYISPYAEHGKKSEQVKKITVSIPLKVLKILTDERTRR
                     QVNNLRHATNSELLCEAFLHAFTGQPLPDDADLRKERSDEIPEAAKEIMREMGINPET
                     WEY"
     gene            38100..38708
                     /locus_tag="JN001_000774"
     CDS             38100..38708
                     /locus_tag="JN001_000774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiX family permuted papain-like enzyme"
                     /protein_id="HAY9052095.1"
                     /translation="MKNRLLILSLLVSVPAFAWQPQTGDIIFQISRSSQSKAIQLATH
                     SDYSHTGMLVIRNKKPYVFEAVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQK
                     LAQTVKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEPQKLKEFDLSNPLV
                     QAKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLFSW"
     gene            38853..39528
                     /locus_tag="JN001_000775"
                     /pseudo
     CDS             38853..39528
                     /locus_tag="JN001_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT         9731 a        10961 c         9947 g         9028 t
ORIGIN      
        1 cattcaacca aatcagccta aaactgccag tttttcgagc gtttcgaagc cgtaacgctg
       61 taaaacgggc aataattgtt cagcttctgg cgtcattgcc atacaaaagg caatattcgc
      121 atcggcagat tttgcatccg gggcttcatg ttctaacaac caggccgttc ggcgagcaat
      181 cgctgcgcca gaatccacta gccgggttcc ctctggcagc acttgtaaca gttcttcttg
      241 tagtagaggg aaatgggtgc aacccaatac aacggtatct ggcggctctt tcattcttaa
      301 ccacgggcgt aggatacgtt ttagtgcatc cagagaaaca tcttcgccat gtagcttcgc
      361 ttcagccaac tcaaccatct ctgccgagcc cagcatttct atctggcatt cattagcgaa
      421 acgcgcgatc agctcatgag tataagaacg tttaactgtt ccgcgggttg ccagtaatcc
      481 gacaatgcca tttgccgtca gacgtgcagc aggtttaatc gccggcacga caccaacaac
      541 cgggaagtcg aacttttcgc gtaatgcagg aagtgaaacg gtactggcag tgttgcaagc
      601 gaccacagcc agcgcaaggg gataacgttc ttgcaccgcg gtgacaattg ccaccactcg
      661 ctcaacaata aacgcttcgc ttttttcgcc atacgggaaa gcgacgttat cgaaagcata
      721 aatgtaatgg agatccggta agagatgccg gatctcgtca tagaccgaca acccaccgac
      781 gccggagtca aacaccagca cggtgggacg tggttcagaa ggtgtagctg ccagacaagg
      841 tgtattcccg tcctgcagtt tggtagccat agactgtctc ataatctttg tcgaacaggt
      901 tggctatttt accacgaact gtcaggtgag aggtgaccgg atacgcaacc gcaagatccc
      961 acaagctcac accgcccatt ttaacggttt gataaggata agatgagtaa tccttatcat
     1021 agcgagtgcc taaatactga taagtaatac cccagtcgaa gtcatacaac tgccagtcga
     1081 gctggtattt cacctgctgt ttagcacggc gtaacaacgg cgtgtcggta atcgcattgc
     1141 gcgcatcgac ataatcataa ctcacagtat gcgtcagtgg tccggtatca aaattggcgg
     1201 tcgcctcgac gcccttaatc cgcgctttcc cttcgttgta atatttcagg gtgtgatcat
     1261 cataatcgat caagtcactg acatcgttac gatatccgga aatacgccag ttcaccccag
     1321 cggttaagcc ttcaaacgcg ccttcccact gtttgctttt ctccgggtcc agattcggat
     1381 ttccgtagaa gccatacagt tgccccagat ttggtgcctt ataagatgtc ccgtaggaag
     1441 caatgaagcg ataaccttcg atgaattccc aaccggcgct ggtttgccag gttccatgac
     1501 gaccaaactg tgagttatcg tcactgcgtg ctgcgccttc aaaggtaaaa tcgccgactt
     1561 gttgcagccc ggtcagatag atgccggtat tacgttgatc atatccatcc tcaacataac
     1621 ctgtacccgg cgtcgtagtc tgtttctgcc agtcgacacc cgcaccaata ctaccgtgac
     1681 caacgatgac attgtttgcc cactggacgg tgtattgctt catctcatcg agcgtcgccg
     1741 acgaatcata acgaccataa tggggatcgt agttgtaatc tttgctatgg ctatagctgg
     1801 taatgagttg tgatttaatc agttcgccgt tatagcgcag cccggcgtcc caactttggc
     1861 tatagagttt acggatatcg agcaacggtg aaccgggaga ataatacgcg tcataattgg
     1921 tacggttatc atagccatag ccgcgcacaa agccgctcca ggcatcagta aagttatgct
     1981 ccagcgcgcc ataaagcgtt ttacttaaaa aaacatcgtt atctgtctgc gcttgcgttc
     2041 cggtattacc ataggcaaca acatcataac catgagtatg ggcataatcg cccaacagcg
     2101 ttacccgtgt cttatccccc agttgttgct gcgtagagac atcatagttc tgataactat
     2161 tgcttcccca ccctgctgaa atttccgttc cgggttcatc gcgcgtcgtg atgatattca
     2221 ccaccccgcc tattgcatcg gaaccataaa cagcggagcg cggcccacgg atatattcaa
     2281 cacgctggac aagcgcacgc aatagggaac tggctaaggt cggcagaacc actcaccccc
     2341 gccagattca ggcgtacgcc atcaattaac accaacacat gactggcatt tgtaccgcga
     2401 ataaaaatag atgagagctg acctgaaccg ccgttttggg tgatatcgac gcccggaaga
     2461 cggcgcagca catcattgac cgaggtcgac tgccagcggt cgatatcctg acgggtcaca
     2521 acggtggttg gtgcaagcac agtgctgcgc ggctgttcaa aacggttagc agtaacgacg
     2581 agagtatccg ggctggtatc ctgtgcccaa gcggaaaagg ctgtgacaga acacgccgtc
     2641 agcagcgaag cttttttaat cattgtaaag catccacaat agaagaagga tgccgcaggt
     2701 ttcatcaata ttacgcgatg atgagacgtt ggccggcagg tcttcgggct tggaggggta
     2761 tctaagatac taagagatga tgacttccca ccggatggca gtgtccgcat aacgcaatca
     2821 tcgcaccttt ccttaccgct gcgcgtcagc tccagattcg cactggattc cctattaact
     2881 cacaggaccg gcaagtggat gctacaggtt gtaacaagtt actgtccaga cgtagctcac
     2941 aaataggaat tcatcaagat ctggacatct gatgagcaat ccctacaatc gccgcgtact
     3001 ttaatttttc aggatacatc atgacccccg aacaccttcc aacagaacag tatgaagcgc
     3061 agttagccga aaaagtggta cgtttgcaaa gtatgatggc accgttttct gacctggttc
     3121 cggaagtgtt tcgctcgccg gtcagtcatt accggatgcg tgcggagttc cgcatctggc
     3181 acgatggcga tgacctgtat cacatcattt tcgatcaaca aaccaaaagc cgtatccgcg
     3241 tggatagctt ccccgccgcc agtgaactta tcaaccagtt gatgacggcg atgattgcgg
     3301 gtgtgcgtaa taatcccgtt ctgcgccaca agttgttcca gattgattac ctcaccacgc
     3361 tgagtaatca ggcggtggtt tccctgctat accataagaa gctggatgat gagtggcgtc
     3421 aggaagcgga ggccctgcgc gatgcactgc gcgcgcagaa tctgaatgtg catctgattg
     3481 gtcgggcaac gaaaaccaaa atcgagctgg atcaagatta catcgacgag cgtctgccgg
     3541 tcgcagggaa agagatgatc taccgtcagg tagaaaacag ctttacccag ccgaacgcgg
     3601 cgatgaatat tcagatgctg gaatgggcgc tggacgtaac caaaggctca aaaggcgatt
     3661 tactggagct gtactgcggc aacggtaact tttcattagc gctggcgcgc aattttgatc
     3721 gggtattagc caccgaaatc gctaagccgt cggttgctgc tgcgcaatac aacatcgcag
     3781 ctaaccatat tgataacgta caaattattc gtatggcggc agaagaattt actcaggcga
     3841 tgaatggtgt gcgcgagttt aaccgcctgc aagggatcga cttaaagagt tatcagtgcg
     3901 aaaccatttt tgtcgaccca ccgcgcagcg gtctggacag tgaaaccgag aaaatggtgc
     3961 aggcgtatcc gtgtattttg tacatctcct gtaacccgga aacgttatgc aagaatctgg
     4021 aaacattaag ccagacgcac aaggtcgaac gtctggctct gtttgatcag ttcccctaca
     4081 cgcaccatat ggagtgcggc gtattactga ccgcgaagta aaacccatgc cggatgcgcc
     4141 agcatccggc ataataccga ttactcagca acttcctgct tacggttacg catcttcgcg
     4201 ccaatccaga acaccataat gacggagagt actgccggga agaagttaga gccgatatcc
     4261 ggatattccg cacgaactac cgtgctgtac agcagtacgc cgagaataaa acaggcagct
     4321 gccagacccg gcaagcctac cggcatagtg cgattaagat aacgttgatg caggcagtaa
     4381 accgtcagca ccagggaaat aatcgggaat acagaaaatg gcacaatgga gctaaacagc
     4441 gctgcgaaag taccattaat cgataagcca gcaactaacg ccagcagcag cgtacctcta
     4501 tcttgatttg cttgtttcat tactcgtcct tcacatttcc cggaataatt gcggttttct
     4561 cttgttcacg gcgataccag taataagccc ctttcgaaat cattcgcagt tgcagtacca
     4621 gtcgctcttc taattgccga cgttgttcga cgccgacgtc caacgcctcg gcacccgcac
     4681 tgaagacaat tgtcaccatt gcttcggctt gcgcttcagt aaacgcacgc ggcatatggt
     4741 tttcgagttc cagatagtcc gcaagttccg caatgaagtg ctgaatttca cgcgcaacgg
     4801 cggcacgaaa cgcagcggag gtgccggagc gttcccgcaa taataaccgg aaggcgttag
     4861 gattattacc gatgaactcc ataaatgtgg agaccgaggt gcggatcaca ctcccgcctt
     4921 tggcgatacg ctgacgcgcc tggcgcatga gttggcgtag cattaaaccg ctctcatcaa
     4981 ccatggtcag acccagttcg tctacgtcgc ggaaatgccg ataaaaagag gtgggagcaa
     5041 tgcccgcttc acgcgccact tcacgcaaac tcaggctggc gaagctgcgt tcagcactta
     5101 attggctaaa tgcggcttcc accagcgaac ggcgggtttt ttctttttgt tgcgctctta
     5161 tgcccatcac gatgtctgaa tccttgccaa aagtactgct ggcactatac cagagaatga
     5221 acatactgga ttgctccagt attgtgaatg aacggtaacg caataaaaca tatttactgg
     5281 ccggttcttt tacgtacagc ggaaacctgc cgcttaaacg gagagtatcg tcgataaaaa
     5341 tccaataaaa cgtcagggca aaagtaagaa acagacaaag caaaggccgc tcaggatata
     5401 gccagataaa tgacggggat caattggctt acccgcgata aaatgttacc attctgttgc
     5461 ttttatgtat aagaacaggt aagccctacc atgccacatt cctacgatta cgatgccata
     5521 gtaataggtt ccggccccgg cggcgaaggc gctgcaatgg gcctggttaa gcaaggtgcg
     5581 cgcgtcgcag ttatcgagcg ttatcaaaat gttggcggcg gttgcaccca ctggggcacc
     5641 atcccgtcga aagctctccg tcacgccgtc agccgcatta tagaattcaa tcaaaaccca
     5701 ctatacagcg accattcccg actgctccgc tcttcttttg ccgatatcct taaccatgcc
     5761 gataacgtga ttaatcaaca aacgcgcatg cgtcagggat tttacgaacg taatcactgt
     5821 gaaatattgc aggggaacgc tcgctttgtt gacgagcata cgttggtgct ggattgcccg
     5881 gacggcagcg tcgaaacact aactgctgaa aaatttgtta ttgcctgcgg ctctcgtcca
     5941 tatcatccaa cagatgttga tttcacccat ccacgcattt acgacagcga ctcaattctt
     6001 agcatgcacc acgaaccgcg ccatgtactt atctatggtg ctggagtgat cggctgtgaa
     6061 tatgcgtcga tcttccgcgg tatggatgta aaagtggatc tgatcaacac ccgcgatcgc
     6121 ctgctggcat ttctcgatca agagatgtca gattctctct cctatcactt ctggaacagt
     6181 ggcgtagtga ttcgtcacaa cgaagagtac gagaagatcg aaggctgtga cgatggtgtg
     6241 atcatgcatt tgaagtcggg taaaaaactg aaagctgact gcctgctcta tgccaacggt
     6301 cgcaccggta ataccgattc gctggcgtta cagaacattg ggctggaaac tgacagccgc
     6361 ggacagctga aggtcaacag catgtatcag accgcacagc cgcacgttta cgcggtgggc
     6421 gacgtgattg gttatccgag cctggcatca gcggcctatg accaggggcg cattgccgcg
     6481 caggcgctgg taaaaggcga agccaccgca catctgattg aagatatccc taccggcatt
     6541 tacaccatcc cggaaatcag ctctgtgggc aaaaccgaac agcagctgac cgcaatgaaa
     6601 gtgccatatg aagtgggccg cgcccagttt aaacatctgg cacgcgcaca aatcgtcggc
     6661 atgaacgtgg gcacgctgaa aattttgttc catcgggaaa caaaagagat tctgggtatt
     6721 cactgctttg gcgagcgcgc tgccgaaatt attcatatcg gtcaggcgat tatggaacag
     6781 aaaggtggcg gcaacactat tgagtacttc gtcaacacca cctttaacta cccgacgatg
     6841 gcagaagcct atcgggtagc tgcgctaaat ggcttaaacc gcctgtttta acactttatc
     6901 gaaatggcca tccattcttg cgcggatggc ctctgccagc tgctcatagc ggctgcgcag
     6961 cggtgagcca ggacgataaa ccaggccaat cgtgcggcga ggttccggct taatacacgg
     7021 caaataaaca accccatcgc gtttgcgctc cggcggcaca gccagcgcag gcagtaaagt
     7081 gatcccgcta cctgccgcca ccatgttacg cagtgtctcc aggctggtcg cgcggaagtg
     7141 tgtatcttca tccgccccgg cttcaaagca gaaacccatt gcctgatcgc gcaaacagtg
     7201 accatcttcc agcatcagca gtttttcccc tgccagatcg gccatcggta cgcattcgcg
     7261 gttcgcccac gggtgatctt catagatagc cagcaacatt ggctcatcaa acaacggcac
     7321 ttcaatgaat gcttcgctct ctttcaccag cgcgaggatc acgcaatcga gtttgccgct
     7381 gtccagttgc gccagtaact ggtgggtctg tgcttcatgc agatacattt ccagctttgg
     7441 aaatgtctgg tgcagcatcg ggataatatg cggcagcagg tacggtccaa ccgtaggaat
     7501 caaaccaata tgcagcggtc cggacatcgt ctcgccctgc tggcttgcca tctctttaag
     7561 gactttcacc tcacgcagca cggtacgcgc ctgatccacc agcagcattc ccgcctgggt
     7621 gaacaacact ttacggctgg tccgctccag caacatcacg cccagctcat cttccagctt
     7681 acgaatttgg ccgctaagcg tcggctggct aacgtggcag gaatctgccg cacgccgaaa
     7741 atggcggtgt tcagccaatg ccaccaggta ctcaagatca cgaatattca ttatccatcc
     7801 tccatcgcca cgatagttca tggcgatagg tagaatagca atgaacgatt atccctatca
     7861 agcattctga ctgataattg ctcacagaaa cggagcggca cctcttttaa cccttgaagt
     7921 cactgcccgt ttcgagagtt tctcaactcg aataactaaa gccaacgtga acttttgcgg
     7981 atctccagga tccgcttttt tttgccataa aaaagcccgg cgataagcca ggctcaaatt
     8041 tgtacatata aatgttctta ccccaaccgc gcctgcgcaa aagcaatcgc ttgggccacc
     8101 tgctgcggtg agacgccgcc ttttgccgca cgcttgtcga ggcacgattg tagcgacaga
     8161 atcggataga catcttcgcc aatcacgtgg ctgaatttct gcaactcgtc gagcggcaga
     8221 tcttccagcg gtttgccctg acgaatggct tccaccaccg cttcacccac gatatggtgc
     8281 gcctcgcgga aaggtacgcc tttcgccacc aggtaatccg ccagttcggt ggcgttggcg
     8341 taaccctgct gagccgcttc ctggcaacgt ggacgtttca cctgaatgcc gtccagcacc
     8401 agcgccgcca tatgcaggca gtccagccag gtatcgaacg cgtcgaacag accttctttg
     8461 tcttcctgca tatctttgtt gtaagccagc ggcaaacctt tcagcgtcat catcatgccg
     8521 gttaacgcac cctgcacccg accgcattta ccgcgaatca gctccagcgc atccgggttt
     8581 ttcttctgcg gcattaatga tgaaccggaa gtcacgcggt cagaaagctc cacaaacccc
     8641 gcttcgccgg tgttaaagaa aatcagatct tcagcaaaac gcgacagatg caccatgccg
     8701 atagcggcag ccgacagcag ttccaacaca tggtcacggt cagaaacgct gtccagactg
     8761 ttacgggtcg ccgaagcaaa gcccagccag cctgctaact gttcacggtc gatttcatag
     8821 gccgttcccg ccagcgcgcc acagcctaat gggctgacat ccagacgctt aagcgcatcc
     8881 tgcaaacggc tttcatcacg cgccagcatc tcaacatagg ccaggcacca gtgcgcgaac
     8941 gtcaccggct gggcgcgttg caggtgagtg taacctggca ttaccgcgtc ctgattgttt
     9001 tgtgcggttt ccaccagcgc cgattgcagc tgccggttag ccgtcagtaa ctcgctaacg
     9061 gtatctttgc accacagttt caggtcagtc gctacctgat cattacggct acgcccggta
     9121 tgcagctttt tgcctaactg gcccactttg tcgatcagtt tgccttccac ccagctatgg
     9181 atatcttcgg cgtcgctttc aaggatttgt tgtggcctgg cgcgaacatc ttccagcaac
     9241 acgttcagcg cctcttccag ttgcgcctgc tcttctgcgg ttaacacgcc gaccgttacc
     9301 agggctttgg accaggccac agagccaaca atatcctgct ccgccagacg gtaatcaaag
     9361 cgcagtgagt cgttgaattg tttgaaccgt tgatctgctg cctgggtaaa acgcccgccc
     9421 caaagtgcca taactctgtt tccttatttt gaaattcaat gccggaaagc tgcgcctccg
     9481 gctaacaaaa cttaagctaa aatccgcgta cccatcggca taccgttaaa cagtgccgga
     9541 agctgctccg catgacgcca ggaggcgata tctaccggac ggcccagcgt gcgggccgca
     9601 tccagcgccg cgttcacttt cactatcatg ccgtcagtaa taatgccctg ctcaatcagt
     9661 tgttctgctt tcgcggcggt catttcggca atgcgttgcc ctttgccgtc gagaatgccg
     9721 ctgacgtcgg agagcaaaat cagatccgcg cccagcgttg ccgccagcgc cgttgccgcc
     9781 tggtcggcat tgacgttcat cagttgccct tcgtctgtta cgccaatgga gctgaccacc
     9841 ggcagataac cgttctccag caaggagttg ataagcttag gcgaacctgg ctgcgccagt
     9901 ccaacatgac ctaactcttc atcaagctgg gtcactttga cgctgtcgcc atcaccgaga
     9961 aacaaaccta cagccgcaat ctgatgtttc ttcgcccatg ccaacagggt tttatttgcc
    10021 gttcccgcca gtgctccggt gataatgtct atctgatcag caggcgtcac ccgcaggccg
    10081 tttttctttt tcaccggcag attcagccct ttcatcagct catccaccac gcaaccgccg
    10141 ccgtgcacaa tcaccagcgg acgctgatgt gactcacgat aattcaccag tgcgctaaac
    10201 agacgttcca gcgcctcttc actatccagc agtacgccgc ccagtttgat aattaatgga
    10261 ttcatcattg cacccttaaa taagagactg cgtttccgca tagccgaaac gaatattggc
    10321 gcactgtacc gcttgtgccg ccgcgccttt cagtaagttg tcttcggtcg ccacaataat
    10381 cagatgctcg ccctgaacgg caaacccgat atcgcaaaat ggcagcccaa cgacattttt
    10441 cagcgccgga acgcctttgt catacagccg caccagcggt ttatgggcat acgcctgctg
    10501 taacacttgc gcgacttgcg cctgggtcac acccgatttc aggcggcagg taatggtttc
    10561 gagaatgccg cgcgggaaat tgcccagatg tggggtgaag ataacgtcag caccgaggtg
    10621 tgtggcgatc tctggttgat ggcgatgagt aaagacgcca tacggttgca ggctaacttc
    10681 acaaaaacta tttgaaatcg ctgccttacg tcctgcaccg ctcacgccgc tggtggcgtt
    10741 aatcgccggc cactgattga ggtcaagaag atcggcatca atcaacggtt tcagcgccag
    10801 ctgtgccgcc gtcggataac agcctggcac cgcaatcaaa ttcgcttctt ttaatttatt
    10861 accgcaccac tccgccagac cgtaggctgc ctgttccagc agttccgggt attgatgggt
    10921 aaagccgtaa tatttttcat agaaggtggc gtcgttaaca cgaaacgcgc cggaaaggtc
    10981 gaacaccacg cagcccgctt caagaaactg cggcgctaaa tcgtggctaa cttcatgggc
    11041 ggtggcgaga aacactacgt ccacccctgg gctaaactcg ctgatatccg acatcggctg
    11101 caacggcagc tcaacgatgc cttttagctg cggatgcaaa tcggagatta actttcccgc
    11161 atcattgctt tgcgctgaaa cagtcaaagc ggttatgttc atatgcggat ggcgatttac
    11221 ataggtcact agctctgcgc cagcgtagcc gctggcaccc acaatcagcg tattcaacat
    11281 cggggctatt caccttctta tgtctggttg ccaggttaaa cgtaaaacat tcaccttacg
    11341 gctggtgggt tttattacgc tcaacgttag tgtattttta ttcataaata ctgcatgaat
    11401 attgatacta tcatgaccag aggtgtgtca acaatgaaaa acaaattacc gccatttatc
    11461 gagatttacc gcgctctgat tgccacacct tcaataagcg ctacggaaga ggcactcgat
    11521 caaagcaatg cagatttaat cactctgctg gcggactggt ttaaagattt gggcttcaat
    11581 gtggaagtgc agcctgttcc aggaactcgc aacaaattca atatgctggc aagtatcgga
    11641 cagggggctg gcggcttgtt gctggcgggg cataccgata cggtgccatt tgatgacggt
    11701 cgctggacgc gcgatccgtt tacactgacg gagcatgacg gcaagcttta cggcttaggc
    11761 accgccgaca tgaaaggctt ttttgcgttt atccttgatg cgctacgcga tatcgacgtc
    11821 acgaaactga aaaaaccgct ctacattctg gcgactgctg atgaagaaac cagtatggcc
    11881 ggagcgcgtt attttgccga aactaccgcc ctgcgcccgg attgcgccat cattggcgaa
    11941 ccgacgtcac tacaaccggt acgcgcacat aaaggtcata tctctaacgc catccgtatt
    12001 cagggccagt cggggcactc cagcgatcca gcacgcggag ttaacgctat cgaactaatg
    12061 cacgacgcca tcgggcatat tttgcaattg cgcgataacc tgaaagaacg ttatcactac
    12121 gaagcattta ccgtgccata ccctacgctc aacctcgggc atattcacgg tggcgacgct
    12181 tctaaccgta tttgcgcttg ctgtgagttg catatggata ttcgtccgct gcctggcatg
    12241 acactcaatg aacttaatgg tttgctcaac gatgcattgg ctccggtgat cgaacgctgg
    12301 ccgggtcgtc tgacggtcga cgagctgcat ccgccgatcc ctggccatga atgcccaccg
    12361 aatcatcaac tggttgaagt ggttgagaaa ttgctcggag caaaaaccga agtggtgaat
    12421 tactgtaccg aagcgccgtt tattcaaacg ttatgcccga cgctggtgct cggtccgggt
    12481 tccatcaatc aagctcatca gcctgatgaa tatctggaga cgcggtttat taaacccacc
    12541 cgtgagttga ttatccaggt aattcaccat ttttgctggc attaaaacgt aggccggata
    12601 aggcgctcgc gccgcatccg gcaccgttgc caaactccgg tgccgcaata atgtcggatg
    12661 cgatgcttgc gcatcttatc cgacctacac ctttggtgtt atgtatggcg attttttaac
    12721 atttccataa gttacgctta tttaaagcgt cgtgaattta atggcgtaaa ttcctgctat
    12781 ttattcgttt gctgaagcga tttcgcagca tttgacgtca ccgcttttac gtggctttat
    12841 aaaagacgac gaaaagcaaa gcccgagcat attcgcgcca atgcgacgtg aaggatacag
    12901 ggctatcaaa cgataagatg gggtgtctgg ggtaatatga acgaacaata ttccgcattg
    12961 cgtagtaatg tcagtatgct cggcaaagtg ctgggagaaa ccatcaagga tgcgttggga
    13021 gaacacattc ttgaacgcgt agaaactatc cgtaagttgt ccaaatcttc acgcgctggc
    13081 aatgatgcta accgccagga gttactcacc accttacaaa atttgtcgaa cgacgagctg
    13141 ctgcccgttg cgcgtgcgtt tagtcagttc ctgaacctgg ccaacaccgc cgagcaatac
    13201 cacagcattt cgccgaaagg cgaagctgcc agcaacccgg aagtgatcgc ccgcaccctg
    13261 cgtaaactga aaaaccagcc ggaactgagc gaagacacca tcaaaaaagc agtggaatcg
    13321 ctgtcgctgg aactggtcct cacggctcac cctaccgaaa ttacccgtcg tacactgatc
    13381 cacaaaatgg tggaagtgaa cgcctgctta aaacagctcg ataacaaaga tatcgctgac
    13441 tacgaacaca accagctgat gcgtcgcctg cgccagttaa tcgcccagtc atggcatacc
    13501 gatgaaatcc gtaagctgcg tccaagcccg gtagatgaag ccaaatgggg ctttgccgta
    13561 gtggaaaaca gcctgtggca aggcgtacca aattacctgc gcgaactgaa cgaacaactg
    13621 gaagagaacc tcggctacaa actgcccgtc gaatttgttc cggtccgttt tacttcgtgg
    13681 atgggcggcg accgcgacgg caacccgaac gtcactgccg atatcacccg ccacgtcctg
    13741 ctactcagcc gctggaaagc caccgatttg ttcctgaaag atattcaggt gctggtttct
    13801 gaactgtcga tggttgaagc gccccctgaa ctgctggcgc tggttggcga agaaggtgcc
    13861 gcagaaccgt atcgctatct gatgaaaaac ctgcgttctc gcctgatggc gacacaggca
    13921 tggctggaag cgcgcctgaa aggcgaagaa ctgccaaaac cagaaggcct gctgacacaa
    13981 aacgaagaac tgtgggaacc gctctacgct tgctaccagt cacttcaggc gtgtggcatg
    14041 ggtattatcg ccaacggcga tctgctcgac accctgcgcc gcgtgaaatg tttcggcgta
    14101 ccgctggtcc gtattgatat ccgtcaggag agcacccgcc ataccgaagc gctgggcgag
    14161 ctgacccgct acctcggtat cggcgactac aaaagctggt cagaggccga caaacaggcg
    14221 ttcctgatcc gcgaactgaa ctccaaacgt ccgcttctgc cgcgcaactg gcaaccaagc
    14281 gccgaaacgc gcgaagtgct cgatacctgc caggtgattg ccgaagcgcc gcaaggctcc
    14341 attgccgcct acgtgatctc gatggcgaaa acgccgtccg acgtactggc tgtccacctg
    14401 ctgctgaaag aagcgggtat cgggtttgcg atgccggttg ctccgctgtt tgaaaccctc
    14461 gatgacctga acaacgccaa cgatgtcatg acccagctgc tcaatatcga ctggtatcgc
    14521 ggcctgattc agggcaaaca gatggtgatg attggctatt ccgactcagc aaaagatgcg
    14581 ggcgtgatgg cagcgtcctg ggcgcaatat caggcacagg atgcattaat cagaacctgc
    14641 gaaaaagcgg gtattgagct gacgttgttc cacggtcgcg gcggttccat tggtcgcggc
    14701 ggtgcacctg cccatgcggc actgctgtca caaccgccag gaagcctgaa aggcggcctg
    14761 cgcgtaaccg aacagggcga gatgatccgc tttaaatatg gtctgccaga aatcaccgtc
    14821 agcagcctgt cgctttatac cggggcgatt ctggaagcca acctgctgcc accgccggag
    14881 ccgaaagaga gctggcgtcg cattatggat gaactgtcag tcatctcctg cgatgtctac
    14941 cgcggctacg tacgtgaaaa caaagatttt gtgccttact tgcgctccgc tacgccggaa
    15001 caagaactgg gcaaactgcc gttgggttca cgtccggcga aacgtcgccc aaccggcggc
    15061 gtcgagtcac tacgcgccat tccgtggatc ttcgcctgga cgcaaaaccg tctgatgctc
    15121 cccgcctggc tgggtgcagg tacggcgctg caaaaagtgg tcgaagacgg caaacagagc
    15181 gagctggagg ctatgtgccg cgattggcca ttcttctcga cgcgtctcgg catgctggag
    15241 atggtcttcg ccaaagcaga cctgtggctg gcggaatact atgaccaacg cctggtagac
    15301 aaagcactgt ggccgttagg taaagagtta cgcaatctgc aagaagaaga catcaaagtg
    15361 gtgctggcga ttgccaacga ttcccatctg atggccgatc tgccgtggat tgcagagtct
    15421 attcagctac ggaatattta caccgacccg ctgaacgtat tgcaggccga gttgctgcac
    15481 cgctcccgcc aggcagaaaa agaaggccag gaaccggatc ctcgcgtcga acaagcgtta
    15541 atggtcacta ttgccgggat tgcggcaggt atgcgtaata ccggctaatc ttcctcttct
    15601 gcaaaccctc gtgcttttgc gcgagggttt tctgaaatac ttctgttcta acaccctcgt
    15661 tttcaatata tttctgtctg cattttattc aaattctgaa tataccttca gatatcctta
    15721 aggaattgtc gttacattcg gcgatatttt tttcaagaca ggttcttact atgcattcca
    15781 cagaagtcca ggctaaaccc ctttttagct ggaaagccct gggttgggca ctgctctact
    15841 tttggttttt ctctactctg ctacaggcca ttatttacat cagtggttat agtggcacca
    15901 acggcattcg cgactcgctg ttattcagct cgctgtggtt gatcccggta ttcctctttc
    15961 cgaagcggat taaaattatt gccgcagtaa tcggcgtggt gctatgggcg gcctctctgg
    16021 cggcgctatg ctactacgtc atctacgggc aggagttctc gcagagcgtt ctgtttgtga
    16081 tgttcgaaac caacaccaac gaagccagcg agtatttaag ccagtatttc agcctgaaaa
    16141 ttgtgcttat cgcgctggcc tatacggcgg tggcagttct gctgtggaca cgcctgcgcc
    16201 cggtctatat tccaaagccg tggcgttatg ttgtctcttt tgccctgctt tatggcttga
    16261 ttctgcatcc gatcgccatg aatacgttta tcaaaaacaa gccgtttgag aaaacgttgg
    16321 ataacctggc ctcgcgtatg gagcctgccg caccgtggca attcctgacc ggctattatc
    16381 agtatcgtca gcaactaaac tcgctaacaa agttactgaa tgaaaataat gccttgccgc
    16441 cactggctaa tttcaaagat gaatcgggta acgaaccgcg cactttagtg ctggtgattg
    16501 gcgagtcgac ccagcgcgga cgcatgagtc tgtacggtta tccgcgtgaa accacgccgg
    16561 agctggatgc gctgcataaa accgatccga atctgaccgt gtttaataac gtagttacgt
    16621 ctcgtccgta caccattgaa atcctgcaac aggcgctgac ctttgccaat gaaaagaacc
    16681 cggatctgta tctgacgcag ccgtcgctga tgaacatgat gaaacaggcg ggttataaaa
    16741 ccttctggat caccaaccag cagacgatga ccgcccgcaa taccatgctg acggtatttt
    16801 cgcgccagac cgacaagcag tactacatga accagcaacg tacgcagagt gcgcgtgaat
    16861 acgacaccaa cgtgctgaag ccgttccagg atgtgctgaa tgaccctgcg ccgaagaaac
    16921 tgatcatcgt tcatctgctg ggtacgcata tcaaatacaa ataccgctac ccggaaaatc
    16981 agggcaagtt tgatggcaat accgatcatg ttccgccagg attaagcgca gaagagctgg
    17041 aatcatataa cgattatgac aacgctaact tgtataacga tcatgtggtt gccagcctga
    17101 ttaaagactt taaagcggca gacccgaacg gattcctggt ttacttctct gaccacggtg
    17161 aagaggttta cgacacgccg ccgcacaaaa ctcaggggcg taacgaagac aacccgacgc
    17221 gccacatgta caccattccg ttcctgctgt ggacgtcgga aaaatggcaa gcgactcatc
    17281 cccgtgattt ctcacaggat gtcgatcgta aatacagcct ggcggaactg atccacacct
    17341 ggtcagattt ggcgggctta tcttacgacg gttacgatcc aacccgttca gtggtgaatc
    17401 cgcagttcaa agaaactacc cgctggattg gtaacccgta caagaaaaac gcgctgatcg
    17461 attacgacac tctgccgtat ggcgaccagg taggtaatca gtaattatca gccaggcgct
    17521 atttgccgga tgcgacgctt gacgcgtctt atccggccta cagatcgcgg cggtaggctg
    17581 gataaggcgt ttacgccaca tccggcaata caactgccgc aatgtttaca tcgaactccc
    17641 ctcaggccac acttttcagg tggccttttt taataatgcc agttactgtt ttcccgtcta
    17701 catacctaag ggaataacat gtatcacgac atcagctatc tgctctcccg cctgatcaac
    17761 ggcccggtgc ccgatcttgc gtatcaggtc gattttccac ggctggaaat tgtgctggaa
    17821 ggtgagtttg ttgataccgg cgctggagca acgttagttc ccggcgatgt gctgtacgtt
    17881 gccgctggtg gctggaattt cccacaatgg aaaacaccca ctaccacctt tagcgtgctg
    17941 tttggcaaac agcaactcgg cttcagcgtc gtgcaatggg atggcaaaca atatcaaaat
    18001 ctggcgaagc aacacgtcgc ccgacgcggc ccacgtatag gttcttttct gctacaaacg
    18061 ctcaatgaaa tgcaaatgca gccgcaggag cagcaaacgg caaggcttat cgtagccagc
    18121 ctgcttagcc actgccgcga tttgctcggc agccaaatcc agaccgcctc acgcagccag
    18181 gcactatttg aagctattcg cgattatatc gacgaacgct atgcctccgc gcttacccgc
    18241 gaatctgtcg cacaggcatt ctatatttca ccaaactatc tctcgcacct gtttcaaaaa
    18301 acgggggcca ttggttttaa cgaatacctg aatcacacgc gactggagca cgctaagacg
    18361 ttattgaaag gctatgacct gaaggtaaaa gaagtggcgc acgcctgcgg ctttgtcgac
    18421 agcaactact tctgccgtct gtttcgtaaa aacaccgaac gctcgccgtc ggaatatcgc
    18481 cgacagtacc acagccaact gacagaaaaa ccgactactc cagaataaga tgggtttgct
    18541 gcggcgcaga aagcactttg cgcaccgcgc tcattacccg ctgcggctca cgcaggaatg
    18601 cgtagatgct gcattgcaca tagcggcaat gttcaaatcg ctcggcaccg gcaagctcga
    18661 tatccgtaat caacagagca acatccgccc gacggatatc ctcgtccgct aaacgattct
    18721 ccgttcccag cgcgccctga gtttcaatgc tgacgcccca cttctctaac tggcacaact
    18781 tttccagccg ttccgccgcc atataagtat gcgccacgcc gcttacgcag gcggttactg
    18841 ccaccaggta tgccatttta acctcccacg gtaacctgaa atccggcccg ttctgccatt
    18901 tcgcgcatcg ttgccacatc ggctgatgac ggcgcagcaa catccttcat cgaccatgtt
    18961 ttccccagca ggcggtattt cggctcgccg tactgatgaa acggcaacag atggatctgc
    19021 ctgatattca gcgggatcag cacgtccagc gcctgctgca tattctcccg gctgagtgtg
    19081 aaaccgggga tcagcggcaa acgcgggatc acgttgacac cctcactcac cagcaaacgc
    19141 aggttctcca gtacgcgtgg caggttcatc ttcaccacat cccgcgcctg agtcgcgtcc
    19201 ataattttta aatcgaacaa cacttcatcg cacaatttcg ccagcggtaa cagcttgctg
    19261 gctggtgcgt ctccggcagt ttcaatggca catgagacac cccacagccg cagtcgctgt
    19321 aaaaaacggg tagcaaactc cgcctgcatt aacacttcgc cgccagaaag cgtgacgccg
    19381 ccgccggacg tgcgaaaaaa aatgtcatct ttcatcactt cccgttccag agcgtcaagg
    19441 ctgatatcgc gaccaatccg ttcaaacgcc ccggaggggc attcatccgc atcacgcaaa
    19501 catttcgcac agtgcagaca tttcgcctct ctgcgtaccg tctggatttt gccggagatc
    19561 gactccggat tagcacacca cgggcaaaga tgcggacagc ctttaaaaaa gaccaccgta
    19621 cgaatgccct cgccgtcatt cagtgaataa cgctgaatgt tgaaaatgcg cgccacatca
    19681 ttgaggcgcg tttccacaac gttacagctg atgcgctgtc cggcggatga tgtcatcctg
    19741 gatctccttc gacagttcga caaagaaggc gctgtatccg gcaacgcgca ccaccagccc
    19801 ggcataatct tgtgggcgct gttgcgcttc ccacaacgtg tcggcgttca ccacgttaaa
    19861 ctgaatatgc tgcaacttaa gctgggtaaa cgcccgtaag aagtcggcca gtttgcgtaa
    19921 tcccgcttca ccttccaggg tcgccggagt gaatttcacg ttcagcaacg taccgttaga
    19981 cagcagcgta ttatcgagct tactgactga cttcagtacc gctgttggcc cttgttcgtc
    20041 ctggcccagc ataggtgaca agccgccgtc tgccagctgt tctccggcaa aacgaccgtc
    20101 tggcgtcgcg ccaaccaccg atcccaacgg gacgtgagca gaaacggtat acgatcccgg
    20161 cgtgaagtaa ccaccgcgcg ggttctggta tttttccact tctttgcagt agtggcgcaa
    20221 cagttcggcg ctaatgttat ccacctcgtc gatatcgtta ccatatttct caaagcggtt
    20281 aattaagcga gcgcggactt tttcgccttc tggcgttgca aagttggctt ttaataccga
    20341 cagcaattcg tcaaaactta aacgctgttg ctcaaaaacc atccctttca acgcatggag
    20401 agaatcgctc aggttggcga taccgatccc ctgtacgccg gagaagttat aacgcgcgcc
    20461 gccatcggta atatcgcgac ctttttccag acaatcgctg ataaaagacg agagcagcgg
    20521 tacaggtgcc cagtcgcgat ggccgatatc acaaatattg ctgccctcaa ccatcagggt
    20581 gatgtagtgg ctgatcttgg cgcggatctg ctccagtaaa ccttcataag tcagcgcagc
    20641 attgccttca ttttcatgca ggcagatttc catcactttc agcagattaa acatcgcgat
    20701 gtcatgcaag ccgtaggttc tgccgggaat agataattcc acacagccca ctacggaata
    20761 gtcgcgcgca tcttccagcg aaacgccacg gttgaggaac gctggtacca ccacttcatc
    20821 gttaaagatt tgcggaatac cggtgccgag gcgaatggtt tcggcggttt tcatcaggaa
    20881 tggcgtgtcg atcaaggcgt tagtgcgcac gccgaggttc ggttgcggta attgcacgct
    20941 ttgataggcg tcaaggcaaa ggaacgaaag cacgttcacc gcgctacgtc cgttctcggt
    21001 taacccgccg agcagtgcgg tatagccggt cgggaaacct gcgaaataac gcgcgctgct
    21061 ggtggagcgc aacagcacga tgtcgttgca tttcacccat aaagattcga gcagttcttt
    21121 caggaacgcc ggatcttcgc cctgggttaa agatgcctga tagaacggca acatatactg
    21181 gtcgaagcgc cctaaagaca gcgaactggc gttggattcg tattgcagaa tgatgttcat
    21241 gtaccagaat aactggcacg cctgccagaa cgtctgcggc ttatgttcgg cgttatggcg
    21301 agagatctcc gcaatagtca gcagttcttc gcgacgctgg gcatctgtgc agtttgccgc
    21361 catcgtttcc gccagtacag cgtaacgcaa aatgtgtttc tgcgaggctt ccagcagtaa
    21421 cagcgctgcc tgataaaagt gattctccgg ctgttgctga caatgttgct gcatctgtgc
    21481 caccaactcc cccagcccgt gattcaacag gcgtgggtaa tcaataataa tgtgcccctg
    21541 gcctttatcc gtctggttaa tgctgaaaat ctgcgtgctg gtcgcggctt ttacttcatc
    21601 cgtcatctgc ccgttgatga aatctttcat cgaacgtttt tcccagtacg ggaacaactc
    21661 ttcacgatag atacgtttat cttcttcgct gatagcaaag cggtcctgcg gacgcgtcgg
    21721 gaattgatcc agctctttca gcagccagta agggtccatt tccggcgaca taatcccggc
    21781 gcgcggtttt acggtgcggt taccggcaat cagttcttca tcacgaatcg aaatttcaac
    21841 atgttcaagg atatacgctg ttgctttcgc ccggcgcaat atcaccggtt cgccttcggt
    21901 ttgccgatgg ctggcggtat aaagcagcgc ccgctccagc gagatttcac gggtattggc
    21961 aaacagtgca gttttgaggc gagagatacg attcgtcatg aggaactcct gtgggaaagc
    22021 gaacccgccc ttgcgagcgg gagaagaact taagcggttt gcgccaggtg agcttcaatt
    22081 ttgctcataa tggcgtcagc acgttttact gcatcgctga tgttgacgcg cacgatggtc
    22141 ttgccagcaa aacgctcttc aaacttgatg ccgatatctt tggtcagaat caccatatca
    22201 gcgctcgcca catcttccgc agtcagttca ttttccagac caattgaccc ctgggtttct
    22261 actttcactt cccagccttt cgctttcgcg gcactttccc gcgcctctgc tgccatatag
    22321 gtatgggcaa cacctgaagg acatgcggtt actgcaataa ttttcgtcat ggctcgttcc
    22381 tcaattaatt aatttcaaaa tccaaatcca ggtcgtcttc tttttcatca gtcgaagacc
    22441 catttttacg cgccagactt ttcagcacgt tcacacaaac agccgtcacc actgctccga
    22501 cagccactgc tgcgatataa cccagcttgc cttcaaccac cggcagcaca atcagaccac
    22561 cccagcctgc atagcactgc gcaccgacca gcgccgcagt tactgcacca caaactgaac
    22621 cgaccatgat ggaaggaatg acacgcagcg gatcggcagc ggcgaaagga atcgcccctt
    22681 cagtaacgcc aacacagccc atcaccagtg ccgctttgcc ggtttcgcgc tcttctgcgg
    22741 agaaattttt acgaccaatc agcgtcgcca gccccatccc cagcggcggg atacaaatac
    22801 ccacggcagc gatgaccacc acggtataaa caccctgagc aacgcaaatc agcatgaagg
    22861 cataggctac tttgttaacc ggaccgccca tatcgaacgc cagcatcaga cccatgatca
    22921 ccgccagcat aacaatgctg ccctgctgca tcccctgaag ccactgagtc aggctgttgg
    22981 tcaacgcccc tacaggctcg cccaagcccc acatcatgat gcctgcggta atcagtgtgc
    23041 cgacgatagg aataatgaag ataggcatca ccgagcgcag aactttatgc accggaattt
    23101 tcttcaggta atgcaccacg atgccgccga taatcccggc gatcagtgca ccaaagaagc
    23161 ccgcaccaaa gctgttacca acccaggcac cgatagcgca cggagccagc gcagaacgct
    23221 ctgcaatgga gtaaccaatg taagcggcga ggaaaggcac catcagcgtc aaacctgcaa
    23281 cgccgatatc aaacagtttt ttcaaattcg gatcggctac ggcatccggc actgcgcctt
    23341 tgccatacaa catgacggaa accgccagca aaataccgcc cgataccacg aagggaatca
    23401 tgtgtgaaac gcccgtcatt aaatgctgac gggtattttt caggatctgc accaactcat
    23461 tcataagctg ctcccgggct tgcgaaagcc catgtccata tttttgatgg aggaaacaat
    23521 aggcaatcgc aggcggagca aacagtggat aaaaaggcca tttactggac ttttgtaata
    23581 tcagtacaaa aatgcgatcc gcctcataac ttgcgataaa ccggaagcat gccgcaaaac
    23641 ggcgtcttgt gagacgcgtc gcaaattgac ggttacatta catttgtcca gcttttggca
    23701 gatttgtcac atggcaggcc gttgccgtgc gctcttatcc tgtaaacaga aaaccgtacc
    23761 gggagagagg caatggccct gattgtggaa tttatttgtg agctacctaa cggcgtacat
    23821 gcgcgtccgg caagccacgt tgaaacgctg tgtaatactt tttcatcaca aattgagtgg
    23881 cataacctgc gcactgaccg caagggcaac gccaaaagcg cccttgcgct gattggcacc
    23941 gatacgctgg cgggcgataa ctgccagtta ctgatttccg gggccgacga acaggaagcg
    24001 caccagcgtt taagccaatg gctgcgcgat gaattccccc actgcgatgc gccgctggcg
    24061 gaagttaaat ctgacgaact ggaaccactg ccggtttcac tgaccaatct gaatccgcaa
    24121 attatccgcg cccgcaccgt gtgcagcggt agtgcaggcg gcattctgac gccgatctct
    24181 tctttagatc tcaatgcgct gagtaatctt cccgcagcca aagacgttga cgccgagcaa
    24241 tccgcactgg aaaatggcct gacgctggta ctgaaaaaca ttgagtttcg tctgctggat
    24301 agcgacggtg ctaccagcgc gatactggaa gctcaccgat ccctggctgg cgatacatct
    24361 ttacgtcagc acttactgac aggcgtcagc gagggattaa gctgtgccga agcgattgtc
    24421 gccagtgcga atcacttttg cgaagagttc gcccgttcca gcagcagcta cctgcaagaa
    24481 cgtgccctgg acgtacgcga cgtctgcttc cagttactcc agcaaatcta cggtgagcaa
    24541 cgcttcccgg caccgggcaa actgacgcag cccgccattt gtatggctga tgaactgact
    24601 cccagccagt tcctcgaact ggataaaaat cacctcaaag gtctgttact gaaaagtggc
    24661 ggcaccacct cacataccgt aattcttgcc cgttcgttca acattccgac actggttggt
    24721 gtagatattg atgcccttac tccgtggcag catcaaacga tttatatcga cggcaacgcc
    24781 ggggcgattg tggttgagcc aggggaagcc gtggcccgtt attatcagca agaagcccgc
    24841 gtacaggacg cccttcgtga gcaacagcgt gtctggctga cccaacaagc ccgtaccgct
    24901 gacggtatcc gcattgaaat tgccgctaac atcgctcact ccgtggaagc gcaggccgca
    24961 ttcggcaatg gtgcggaagg cgttggtttg ttccgcactg aaatgctcta tatggatcgc
    25021 accagtgcac cgggcgaaag cgagctgtac aacatttttt gtcaggcgct ggagtctgcc
    25081 aacggacgca gcattattgt gcgcactatg gacattggcg gcgacaaacc cgttgattat
    25141 ctgaacattc cggcagaagc taacccgttc ctcggttatc gcgctgtgcg tatttatgaa
    25201 gaatacgcct cgctgttcac cacacaacta cggtcgatcc tgcgcgcctc cgctcacggc
    25261 agcctgaaaa tcatgatccc gatgatctcc tcaatggaag agatcttatg ggtgaaagaa
    25321 aaactggcgg aagccaaaca gcaactgcgt aacgaacaca ttccgtttga tgagaagatc
    25381 cagcttggca ttatgctgga agtaccgtcg gtgatgttca tcatcgatca atgctgcgaa
    25441 gagattgatt tctttagtat tggtagtaat gacctgacgc aatatctgct ggcagtggat
    25501 cgcgataacg ctaaggttac tcgtcactac aacagcctga atccggcatt cttgcgggcg
    25561 ctcgattacg ccgtgcaggc ggtgcatcgc cagggcaaat ggattggtct gtgcggtgag
    25621 ctgggagcga aaggttccgt gctgccgttg ctggtcggct tagggctgga tgaactcagc
    25681 atgagcgcac catcaattcc ggcggcgaaa gcgcggatga cgcaacttga tagccgtgag
    25741 tgccgcaagt tgctcaacca ggcaatggcc tgccgtactt cgctggaagt ggaacacctg
    25801 ctggcgcaat tccgcatgac ccaacaggac gcaccgctgg tcaccgccga gtgcatcacg
    25861 ctggaaagtg actggcgcag caaagaagaa gtgctcaaag gcatgaccga taacctgctg
    25921 ctggcgggcc gctgccgcta tccgcgtaaa ctggaagccg acttatgggc gcgcgaggcc
    25981 gttttctcta ccggtctggg ctttagtttt gccattccac acagcaaatc agaacacatt
    26041 gagcaatcca ccatcagcgt ggcgcgtctg caagcgccgg tgcgctgggg cgatgatgaa
    26101 gcgcaattca tcattatgtt aaccctgaac aaacacgctg cgggcgatca gcacatgcgc
    26161 attttctctc gcctcgctcg ccgcatcatg cacgaagaat tccgtaacgc gctggttaac
    26221 gccgcctctg ccgacgctat cgccagcctg ctgcaacatg aactggaact gtaaaaggaa
    26281 acatcatgga actgtatctg gacaccgcta acgtcgcaga agtcgaacgt ctggcacgca
    26341 tattccccat tgccggggtg acaactaacc cgagcattat cgctgccagc aaggagtcca
    26401 tctgggaagt tctgccgcgt ctgcaaaaag cgattggtga tgagggcatt ctgtttgctc
    26461 agactatgag tcgtgacgcg cagggtatgg tggaagaagc gaagcgcctg cgcgacgcca
    26521 ttccgggcat tgtggtgaaa atcccggtga cttccgaagg tctggccgcc attaagatgc
    26581 tgaaaaaaga gggtattact acgcttggca ccgcagtgta cagtgctgca caagggttac
    26641 tggccgcgct ggcaggggca aaatacgttg ctccgtatgt taaccgcgta gatgcccagg
    26701 gcggggacgg cattcgtacg gttcaggagc tgcaagcgct gttagaaatg cacgcaccag
    26761 aaagcatggt gctggcggcc agctttaaaa cgccgcgtca ggcgctggac tgtttactgg
    26821 caggatgtga atccatcacc ctgcccttag atgtagcgca acaaatgctc aacacccctg
    26881 cggtagagtc agctatagag aagttcgaac acgactggaa tgccgcattt ggcactactc
    26941 atctctaaag gagcaattat ggaccgcatt attcaatcac cgggtaaata catccagggc
    27001 gctgatgtga ttaatcgtct gggcgaatac ctgaagccgc tggcagaacg ctggttagtg
    27061 gtgggtgaca aatttgtttt aggttttgct caatccactg tcgagaaaag ctttaaagat
    27121 gctggactgg tagtagaaat tgcgccgttt ggcggtgaat gttcgcaaaa tgagatcgat
    27181 cgtctgcgtg gcatcgcgga gactgcgcag tgtggcgcaa ttctcggtat cggtggcgga
    27241 aaaaccctcg atactgccaa agcactggca catttcatgg gtgttccggt agcgatcgca
    27301 ccgactatcg cctctaccga tgcaccgtgc agcgcattgt ctgttatcta caccgatgag
    27361 ggtgagtttg accgctatct actgttgcca aataacccga atatggtcat tgtcgacacc
    27421 aaaatcgtcg ctggcgctcc tgcacgtctg ttagcggcgg gtatcggcga tgcgctggca
    27481 acctggtttg aagcacgcgc ctgttcccgt agcggcgcta ccactatggc gggcggcaag
    27541 tgcacccagg cggcgctggc actggcagaa ctgtgctaca acactctgct ggaagaaggc
    27601 gaaaaagcga tgcttgccgc cgaacagcat gtagtaaccc ctgcgctgga acgcgtgatt
    27661 gaagcgaaca cctatttaag cggtgttggt tttgaaagcg gcggactggc ggcggctcat
    27721 gcggtgcata acggcctgac cgctatcccg gacgcgcatc actattatca cggtgaaaaa
    27781 gtggcattcg gtacgctgac gcagctggta ctggaaaacg cgccggttga ggaaatcgaa
    27841 accgtagctg catttagcca tgcggtaggt ttgccaataa ctctcgctca actggatatt
    27901 aaagaagatg tcccggcgaa aatgcgaatt gtggcagaag cggcatgtgc agaaggtgaa
    27961 accatccaca acatgcctgg cggcgcgacg ccagatcagg tttacgccac tctgctggta
    28021 gccgaccagt acggtcagcg tttcctgcaa gagtgggaat aacctactcc aaactcccgg
    28081 cttgtccggg agtttgaacg caaaattgcc tgatgcgcta cgcttatcag gcctacgcaa
    28141 tctctgcaat atattgaatt tgcgtgcttt ttaggccaga taaggcgttc acgccgcatc
    28201 cggcactctg tgccagtaat ctgaaactcc tacgttgttc aggagttttt tatccgcttc
    28261 tggacatttt ctctacagaa caatcgttag cccggaaggt cgaatctgtg actcttattt
    28321 tcacggacga accagatgaa agcttcactg gcgctgctca gcctgctaac ggcatttacc
    28381 agccactcct taaaatctcc cgccgttcca ccaaccgtgg tacaaatcca ggccaatacc
    28441 aaccttgcca tcgcagacgg tgccagacag caaatcggca acacgctatt ttacgatccg
    28501 gcgtatgtgc ggcttaccta tcctggcggt gatgtcccgc aagaacgcgg tgtatgttcc
    28561 gatgtggtga tccgtgcatt gcgcagccag aaggtcgatt tgcagaaact ggttcacgaa
    28621 gatatggcga agaattttgc cgagtacccg caaaaatgga agttaaagcg cccggacagc
    28681 aacatcgatc accgtcgggt gcctaatctg gaaacctggt ttagccgcca caacaaaaca
    28741 cgccccatca gtaaaaatgc cggtgactat caagcgggcg atattgtctc ctggcgatta
    28801 gataacgggc tggcgcatat tggggtggtg tcagatggct tcgcccgcga cggtacgcca
    28861 ctggtgatac ataacattgg cgcaggcgcg caggaagaag atgtgctgtt tagctggcgg
    28921 atggtggggc attatcgtta ttttgttaaa taagcgatcg ccccacatga agaaaaaatt
    28981 cagatgcttt ttacactgac agcttctttt ttcttacggc tcaccagcgc cagtgccagc
    29041 acaatcagca caataccgct accttcaacg gcccccggat tctcaccgag cagccaccag
    29101 gaaaagagta cgccgcaaac gggaacggcc agcgtgctta agctggcaat actggcaggc
    29161 aagtttttca atacaaacaa ccataagctc cacgccagcg ccgtcgccag aatcgcactg
    29221 taggccagcg cccagaacac ggtgggctgc cagtcaattt cacgttgcgg caccagtaaa
    29281 gcgaccacac tcatcaccag cgccgcatag agcatctgcc aggatgttaa cgataataaa
    29341 tccacgcgcg gatgacgggt gtataggcgt ttagcaacaa tcgcgctcgc cccccaacta
    29401 acaccggaga ggattgccag catggcactt ttcatcgaag agaaatcgag ttgccacggc
    29461 tgcaacacca aaaataagcc gaaagcggca atcagaatcg cgaaatattg cccacgtcgc
    29521 aggcgttcac cgagaaacaa cgcggcgaaa atcaccaccc agaacggcat ggtatagctc
    29581 aggatcgcca ccttccccgc acctccgctg accaacgccc actgcgccag accaaccatc
    29641 ccgcaggttt gtaacagggc aatggctaag gtgtatttaa acggcgtcgg gtgcattccg
    29701 cgaccacgta ataaaaggac gatgaataaa acgagagcgc cgaaaatgca gcgtaaggcg
    29761 gtaaagtcga aggcaccgat gtaactggtg acttgcttca tgaaaatcca gctataactc
    29821 cagataagtg tgagcacaac caggccactg attgccagtg ggttgctctt tcctgcggca
    29881 gacatgagag atccagtgtg tagttttcct gtggacacta tacgccggta aagaaacttc
    29941 agcgactgcc tgaaagacag tcactgaaga aggtcagatt acagcaggtc gaaacggtcg
    30001 aggttcatca ctttcaccca tgccgctacg aagtctttaa caaacttctc gtgggcatcg
    30061 ctgctggcgt aaacttccgc taccgcacgc aggacagagt tagaaccaaa taccagatcc
    30121 gcacggctgg ctgtgtattt cacttcgccg gtttcgcggt cacgtccttc gaacagctct
    30181 ttcgattcgt cagtcgcttt ccactcgtaa cgcatatcca gcaagttcac gaagaagtca
    30241 ttgctcaata cgccaacgcg gtcagtgaag acgccgtttt tgctgctatc gaagttggca
    30301 cccagtacac gcatcccgcc caccagcgca gtcatttccg gcgcggtcag cgtcagttgc
    30361 tgtgctttgt cgatcagcag tgactcggtg gtggaaacgt ccagacgagc gcgatagtta
    30421 cggaaaccgt cagcaattgg ctccagcagc tcaaacatct caatgtcagt ctgatcctga
    30481 cgcgcatcaa cgcgacccgg cgcaaacggt acatgaatgc tcaaacctgc ggcgcttgcg
    30541 gctttctcaa caccaaccac accagccagc acgatgatat ccgccagcga ggctttacca
    30601 gactctttct ggattttctc cagaacaggc agagcacgaa cggctgcggc gttcacatcc
    30661 cagtcgcgct gcggcattaa tgccagacgc gcaccgttgg caccaccgcg tttgtcgcca
    30721 ccacggaagg tagaagcaga tgcccaggcc accgatacca gctcactaac agacagacca
    30781 gaatccgcaa tcgcgaattt cagatcgata atgtcctgct cggtcgggtt gtagatcggc
    30841 tgcggcagcg gatcttgcca gatcagatct tctttcggca cttccggccc gatgtagcga
    30901 gatttcggcc ccatatccct gtgcgtcagt ttgaaccagg cacgggcaaa ggcttcgttg
    30961 aacgcctgcg gatcgttgag gaaacgacga gagatcttct cgaactcagg atcaaaacgc
    31021 agcgtcaggt cggtcaccag cattgtcggt ttacgtttct tcgacggatc gaacggatcc
    31081 gggataattt ccggtgcgtc taccgcttcg aactggattg ctccagccgg actgcgggtc
    31141 tgtacccact catatttgaa caggttctcg aagaaatagt tgctccactg ggtcggcgtc
    31201 tgggtccaga caacttccag accagaggta atggcatctg cgccaacgcc gctgccgtaa
    31261 gtgctcgccc agcctaaacc ttgttcttca atcggtgcag cttctggatc aggacctaca
    31321 tttgatgtcg gaccggcacc gtgagtttta cccagcgtat gaccacccgc aatcagcgcc
    31381 acggtttctt cgtcgttcat gcccatgttg ccgaaggtcg cacggatagc tgctgccgca
    31441 gaaagcggtt cgccgctgtg atccgggcct tccgggttaa cgtaaatcag acccatctcg
    31501 gttgcaccca gcggtgcttt cgccagcgct tccggatgac ggtgagtcag ccaggctttt
    31561 tcatcacccc agttaacatc cagatccggt tcccagacgt cttcacgacc ggcaccaaaa
    31621 ccgaaggtac ggaagccgga gttttccagc gccacgttac ctgcgaggat aaacaggtcg
    31681 gcccaggaga ttttctgacc atatttctgt ttgattggcc acaacaggcg acgcgcttta
    31741 tcaaggctta cgttatccgg ccaggagttc agcggtgcaa aacgttgctg accacgaccc
    31801 gcgccgccgc gtccatcgat tgaacggtaa gtacctgcgc cgtgccaggc catacgaata
    31861 aacagaccgg cgtagctgcc ccagtcggct ggccaccacg gctgagattc tgtcagcagg
    31921 gctttcagat cttttttcag gccgtagtaa tctaatttgc tgaattcttt gcggtagtca
    31981 aagtcctcac ccagcgggtt agaacgatta gaatgttggt ttaacaggtc aacacggagt
    32041 tgatttggcc accagtcgcg agtggttgtg cccgcccccg cgctctggtc gtgaccgccc
    32101 tgatggaacg ggcatttgcc agtggctgtc gtgttatgga tatcgtctga cgtgctcatc
    32161 aatgtgctcc cctctacagt gttaccgtta cgatacacag cgttagagag aagttataat
    32221 tgaattaatc cacggatgcg atagttgaga tcttacatat tgttggttaa agagatgtag
    32281 gtcaaattga tcgtaattaa gcttttttga ttatgtccga attcggacaa atgctttata
    32341 aaaaagggtt ttagcttcat atccttcaag taatgaggga gaaaacaagg ctgacaacct
    32401 tattttcccg ccctcatttc gaggcagcat tttgtgctct gtttaaaatt tgtgatcact
    32461 gtgtgatttt cacaaaagcc acactattta taaaccaggt cgaacaccca gcgtatggca
    32521 aatcgcgtaa ctcatttcag cgcggttaag cgtatagaag tggaaatctt tcactccttc
    32581 acggcttaaa atcttcacca tatccatggc aatattcgcg cccaccagtt tgcgggtttc
    32641 ggcatcatca tccaggccgt cgaacatttg cgccatccac gccggaatac gcacgttggt
    32701 catatcggca aatttcttcg cctgtttaaa gttagatacc ggcaaaattc ccggaataat
    32761 ttccacatca atgcccgccg atacacagcg gtcacgaaaa cgcaggtagc tttcgacatc
    32821 gaagaagaac tgagtaatcg cgcggttggc tccggcatcg actttgcgtt tcagattaag
    32881 caaatccgcc tgagcgcttt ttgcttccgg gtgaacttcc ggatacgccg ccacggagat
    32941 atcgaaatct gccacttctt ttaatagcgt caccaggtca gaagcataca tttctggctt
    33001 accacttccc ggcggcagat cgccacgcag cgccacgata tgacgaatac cgttattcca
    33061 gtagtcgcgt gcaatggtgc gcaactcgtc gggcgtcgca tcaatgcaag taagatgcgg
    33121 tgccgcttcc agaccagtgc gatctttaat gcctttaata atgctgtgcg tacggtcgcg
    33181 ctcgccggag ttcgcgccat aggtcaccga tacaaacttc ggtttcaggc tgctaaggcg
    33241 atcgatggag ttccacaggg tctgctccat ttcactggta cgcggcggga aaaactcgaa
    33301 cgaaacgtta atctgcccct ggacttctgc caggcgctga ttcagggcat cccgctggct
    33361 ggcgtgaaaa aagctcatac cttacctcat caatcgcttg tagttatatg ttgtgttgtg
    33421 cacatctatc cgtttagacg tccagatgta aagatgaagg aaaagccgaa gggcgtcaac
    33481 cgaaaaatga ccaatgatgg tgaggaaaaa tcagggaaga tgaaaaaact tcaggatggt
    33541 aagaaaaaga aaatccggta tgcaaagcaa accggactgc aaatataaac taaccatgta
    33601 cttattgctt cttgccggat tcgtcgtaaa cgcttaatcc ggcctaatcc tatgataatt
    33661 caatatattt cattagaaac cataaacccg aaaacatgag taccgggcat tattaaattt
    33721 ctgaaattac aacaactgtg ccagccggtt gatatccgac tgaatcgccc cggcggtgac
    33781 gtcgcgcccc gcgccaggcc cacggatcac cagcgggttg tcgcgatacc agcggctttc
    33841 gatggcaaag acgttatcgc acggcagcag tgatgccagc ggatggtctt cacgcaccgc
    33901 ctccacgccc acacgcgctt tgccgttggc atcgaaacgc gccacgtagc gcagcaccag
    33961 ccccatttcg cgggccgctt ccagccgttg caccatctgc tcgttaagtt catcgccatt
    34021 ttcaaagaaa tggtcgatgc tgccgccttc gcaatgagca ggcaccagcg attccacacg
    34081 tacctggtcc ggttcaatgt tgtaacccgc ttcacgcgcc agaattacca gcttgcgcat
    34141 tacgtctttg ccggagaggt cgtcacgcgg atcaggctcg gttaagccct gctgccacgc
    34201 ctgatccacc agctcggtaa acggcacgct accgtcgaat tgcaggaaca gccaggagag
    34261 cgtgccggag aagatcccgc tgatcgacaa aatagtatcg ccgctgtcga tcagatcgcg
    34321 cacggtgtgg ttgatcggca agcccgcacc gacggtggca ttgtacagcc agtgacgccc
    34381 ggttttttcg aaggcgtcgt ggatctggcg atatttattg ctgtcgctgg ctcccgccag
    34441 tttgttggcg ctgataacgt ggaaaccgtg gctggcgaaa tcaagatact gatcagcaag
    34501 ctgctggctg gcggtaacgt ccagcaccac taaatcatca tacggatggg cgcgcatcca
    34561 caggaacaac gactcttcat cctgctcaac cgcttcatcg ttgaagaagg ctaacgcgcg
    34621 gctggcgtcc agcccgtcat agctcaacag gctgcggcgg ctgtccacca cacctgccag
    34681 cacaaactca aagccggtac gtgccgaaag cgtgctctgc tcacgggcga acagttccag
    34741 ccaacgggaa ccgatattgc ccttaccgaa caataccagg ccgatgcgtt tttctgcgcg
    34801 gaagacggac tgatgcagcc cctgaatcag gctttcggtc gggccggtgc gcagtactgc
    34861 caccaggctg atgccgtcat cggactgcca ggtaaattcg accggctggc ctttcagttg
    34921 ctgccagaag cggtggcaat gcagcgggtt acgggtgacg cctgcaccga ccatcgccac
    34981 cagcgccagc ccctgacgca ggcgcagttc gccaggtaat cccgcttcgt cgaggatttt
    35041 cagcgcactg tcggccactt ctgaggtgta gcaaaattgc agcaactggc gatcgttatg
    35101 tacgccaacc gccagcgggc gtacctgcgc gcgtttcagg atttggtcga tctctttatg
    35161 cgccagtttg aaatcctgac tggcgggcac ctgaaactca atcaaacaga catcatcgtg
    35221 gctggtgaca atacgcgcac cagtaccgga ggccagcacg cgttcaatgc gcgtggaacc
    35281 ttgatccggc gtgtagctac agcgcagttg caggtcgatt tcgctgccag aaaccggctg
    35341 taaagtacgg gcgtgaagaa cgggagccgc caggcgcgcc agttcgctgg cctcatccag
    35401 acgcagcaac ggcagcaggc aggcatcttt cactttacgc gggtcggcac tgtatacccc
    35461 ggcgacgtcg ctccagatgg ttacgcgaga aacacccgcc agcgcaccga tttgtgtcgc
    35521 ggaatagtcg gaaccgttac gccccagcag caccgtttca ccggcgttgt tgcggctgat
    35581 aaatccggtc accaccagac gtttgcccgg atgttgcacc agcagctgtt gcagcaacgg
    35641 gtaagaaagc ccttcatcaa cctgcggttg tgcggcgcgt tcagcgcgta aaaactcgcg
    35701 ggcatcaagc caggccgctg gcagcccttg ttgattaagt accgcagaca tcaggcgtgc
    35761 cgaccatact tccccgtggc ccaccacttc cgcatacact gcgtcgttaa taccgctgtc
    35821 gagcagcgcc gccaggcgct caaggtcgct gacaaaagcg ctaatgaggc tatcagcttc
    35881 ttcagcgggt agcagaccgc taatcagatc gcactgatag cgacgcagcg tttgttgaac
    35941 ctgatgcgca gagagacgat cggtctggct tagtttcaac cagttaatca actggttagt
    36001 ggtgctaccg gcggcggaaa ccaccatcat atcgtcaggc tgagagtact ccgccataat
    36061 gcccgcaaca cgcaaataac acttcacatc agccagacta ctgccaccaa atttatgcag
    36121 ttgacgacct ttcgcccctg cctgcgcaat cacactcatt tttacccctt gtttgcagcc
    36181 cggaagccat tttccaggtc ggcaattaaa tcttcgccat cttcaatacc ggtggagata
    36241 cgcagcagcg tctcggagat cccggcggca gcacgcgctt ctggtgccat gcctgcatgt
    36301 gtcatggttg cggcgtgaga gattaaactt tccactcccc ctaatgattc cgccagcgta
    36361 aacaacgaca gcccgcccag gaaacgacgc agcgtctgct catcgccatc cagttcaaaa
    36421 ctcaacattg cgccaaagcc tttttgctgg cgcgcggcaa tttcatgccc ctgattttcc
    36481 ggcagcgacg ggtgatacag ttttttcacc aacggctggg tttgcagata tttcacaatc
    36541 gcctgcgcgt tgcgctgggc cagctccata cgcggcacca gcgttcgcaa cccgcgtagc
    36601 agcagatagc tgtcaaacgc gccgcccgtc acgccaatat tgtttgtcca ccaggcaagt
    36661 tcagtgacaa cgtccgggtc tttagcaatc accacgccag ccaccacgtc agagtgaccg
    36721 ttcagatatt tcgtacatga atgcaacacc agatcggcac ccaatgccag cggattttgt
    36781 aatgccgggc ttaagaaggt gttatccacc acgctcaccg ccccgacttc ccttgccaga
    36841 tggcagattt tcgcaatatc cacgacgcgt aacaatggat tacttgggct ttctaccagt
    36901 accagtttag gtttttctgc cagcgctgcc cgtaatgcct gttcatcgcc ttgatcaaca
    36961 aacaacacgc gatagcaacc gcgtttcgcc agactgtcga acaggcgata gctaccgccg
    37021 tagcagtcgt gcggcgcaac cagcagatcg ccaggtttca aaaagacggt cgttaccaag
    37081 tgaatcgcgg acatgccggt attagtaagt actgcgccag caccgccttc cagttctgcc
    37141 agcgcacgct gaaccacatc gcgcgttggg ttgccgcgac gcgagtaatc atgcgcgcgc
    37201 ggttcattaa atccggtaaa gttataggtg ctggaaagat ggatgggagg gacaacgcaa
    37261 ccatactgtt cgtcgtcatt taacccgcta cgcactgcga tggtggcctg tttacgcgtc
    37321 atgtgatgaa gtttcctggg ctttgtcggt gaaatgtcag gcaccagagt aaacattgtg
    37381 ttaatggacg tcaatacatc tggacatcta aacttcttta cgtatagatt gagcaaatcc
    37441 caaatagccg ttaaaattat atgcattatc acgccgacag gtgcattaca cgatgtcacg
    37501 gtaacgcctg tacggtaaac tatgcgggtt tacggtcagt acccacataa attgtgtggt
    37561 ctggtctcaa tttattgacg aagaggatta agtatctcat ggctgaatgg agcggcgaat
    37621 atatcagccc atacgctgag cacggcaaga agagtgaaca agtcaaaaag attacggttt
    37681 ccattcctct taaggtgtta aaaatcctca ccgatgaacg cacgcgtcgt caggtgaaca
    37741 acctgcgtca cgctaccaac agcgagctgc tgtgcgaagc gtttctgcat gcctttaccg
    37801 ggcaaccttt gccggatgat gccgatctgc gtaaagagcg cagcgacgaa atcccggaag
    37861 cggcaaaaga gatcatgcgt gagatgggga ttaacccgga gacgtgggaa tactaaagca
    37921 aaaaagagcg gcgcggagtg gaatcgcctg atgcgctacg cttatcaggc ctacgtcata
    37981 ttgcaattta ttgaatttgc acgaacttgt aggccggata aggcgttcac gccgcatccg
    38041 gcataaacaa cgagcacgtt gtctgcgacc caccgctttt tatacatgga cgtttaacta
    38101 tgaaaaacag gctgctgatc ctcagcctgc tggtttctgt acctgccttt gcctggcagc
    38161 cacaaaccgg cgacatcatc tttcagatct ctcgctcatc gcaaagtaaa gcgatccaac
    38221 tggcgaccca ttccgattat agccacaccg gtatgctggt gatacgcaac aaaaagccct
    38281 acgtttttga agcggtcggc ccggtgaaat acaccccgct caagcagtgg atcgcccatg
    38341 gtgaaaaggg caaatacgtt gttcgccgcg ttgaaggcgg actgagtgtt gaacaacagc
    38401 aaaaactggc gcaaacggta aaacgttatc tcggtaaacc gtatgatttc agcttctcat
    38461 ggagcgacga tcgccagtac tgttcggaag tggtgtggaa ggtttaccag aacgcgctgg
    38521 gaatgcgcgt gggcgagccg cagaagttga aagagttcga tctcagcaac ccgctggtcc
    38581 aggctaagct caaagaacgc tacggcaaaa atattccgct tgaggaaacg gtagtttcac
    38641 cacaagccgt tttcgacgcg ccacaactca ccacggttgc caaagagtgg ccgctgtttt
    38701 cgtggtaatg gatgatgaaa aaaataattc ccgccgtagt ctgtttgttg ctttgtagtt
    38761 gcacgacctt tccgcaaact gtcgctccgg taaacggtga tgcctccaat tagttgaatt
    38821 aaggatataa tactcgcttt taaggttgtt tcatggtcac agttaacctt cattgccccc
    38881 gttgccagtc cgttcaggtt taccgtcacg ggcagaaccc aaaaagacat gatcgattcc
    38941 gcggccgtga ctgtcaccgg gtatttcagc tcagttactg ttacgagccc cgtaaaccgg
    39001 gagttaaaga ccaaatcgct gaaatgactt tcaacggtgc cggggttcgc gatactgccc
    39061 gtacgctgaa aatcggcatt aatacagtca tccgaacttt aaaaaactct cgccacgaag
    39121 aataacgtca tccccggtcg ctcatgctga tgtggcactc atctgcgaac ttagtcagca
    39181 atggagcttt gtcggcagta aagcgcgaca gcactggctc tggtacgtgt acaacacgaa
    39241 aactggtggt gttctggcct acacttttgg cccccggact gacgaaacct gtcgtgaatt
    39301 gctggcgctg cttacccttt taccatcggc atgttgacca ctgacgaatg gggtagttac
    39361 accagagagt taccgaagga aaagcatctg actggtaaga tttttactca gcgcattgag
    39421 cgcaacaatc tgaccctgag aacccgaatc aaacgtctgg cccgcagaac catctgtttc
    39481 tcgcgctctg tagaacttca tgaaaaagtc atcggtgctt ttatcgaaaa tatatgttct
    39541 actaattgga gtcatcaccc ttctgatgag ctttccttgg atgattacca gactgaatac
    39601 acagccaaag atttttacct cattctgctc ttttttctca aatgacatat attatatttt
    39661 acatcat
//
LOCUS       DADMJE010000016        38712 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.016, whole genome shotgun sequence.
ACCESSION   DADMJE010000016 DADMJE010000000
VERSION     DADMJE010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 38712)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38712)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38712
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.016"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            40..582
                     /locus_tag="JN001_000776"
     CDS             40..582
                     /locus_tag="JN001_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9052096.1"
                     /translation="MKRSIIAAAVFSSFFMSAGVFAADVDTGTLTIKGNIAESPCKFE
                     AGGDSVSINMPTVPTSVFEGKAKYSTYDDAVGVTSSMLKISCPKEVAGVKLSLITNDK
                     ITGNDKAIASSNDTVGYYLYLGDNSDVLDVSAPFNIESYKTAEGQYAIPFKAKYLKLT
                     DNSVQSGDVLSSLVMRVAQD"
     gene            662..1336
                     /locus_tag="JN001_000777"
     CDS             662..1336
                     /locus_tag="JN001_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY9052097.1"
                     /translation="MKGLLSLLIFSMVLPAHAGIVIYGTRIIYPAENKEVMVQLMNQG
                     NRSSLLQAWIDDGDTSLPPEKIQVPFMLTPPVAKIGANSGQQVKIKIMPNKLPTNKES
                     IFYLNVLDIPPNSPEQEGKNALKFAMQNRIKLFYRPAGIAPVNKATFKKLLVNRSGNG
                     LVIKNDSANWVTISDVKANNVKVNYETIMIAPLESQSVNVKSNNANNWHLTIIDDHGN
                     YISDKI"
     gene            1352..3832
                     /locus_tag="JN001_000778"
     CDS             1352..3832
                     /locus_tag="JN001_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY9052098.1"
                     /translation="MLRMTPLASAIVALLLGIEAYAAEETFDTHFMIGGMKDQQVANI
                     RLDDNQPLPGQYDIDIYVNKQWRGKYEIIVKDNPQETCLSREVIKRLGINSDNFASGK
                     QCLTFEQLVQGGSYTWDIGVFRLDFSVPQAWVEELESGYVPPENWERGINAFYTSYYL
                     SQYYSDYKASGNNKSTYVRFNSGLNLLGWQLHSDASFSKTNNNPGGWKSNTLYLERGF
                     AQLLGTLRVGDMYTSSDIFDSVRFRGVRLFRDMQMLPNSKQNFTPRVQGIAQSNALVT
                     IEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYAAVPNMLQ
                     PGVSKYDFAAGRSHIEGASKQSEFVQVGYQYGFNNLLTLYGGSMVANNYYAFTLGTGW
                     NTRIGAISVDATKSHSKQDNGDVFDGQSYQIAYNKFVSQTSTRFGLAAWRYSSRDYRT
                     FNDHVWANNKDNYRRDENDVYDIADYYQNDFGRKNSFSANMSQSLPEGWGSVSLSTLW
                     RDYWGRSGSSKDYQLSYSNNWRRISYTLAASQAYDENHHEEKRFNIFISIPFDWGDDV
                     TTPRRQIYMSNSTTFDDQGFASNNTGLSGTVGSRDQFNYGVNLSHQHQGNETTAGANL
                     TWNAPVATVNGSYSQSSTYRQAGASVSGGIVAWSGGVNLANRLSETFAVMNAPGIKDA
                     YVNGQKYRTTNRNGVVIYDGMTPYRENHLMLDVSQSDSEAELRGNRKIAAPYRGAVVL
                     VNFDTDQRKPWFIKALRADGQPLMFGYEVNDIHGHNIGVVGQGSQLFIRTNEVPPSVN
                     VAIDKQQGLSCTITFGKEIDESRNYICQ"
     gene            3848..4882
                     /locus_tag="JN001_000779"
     CDS             3848..4882
                     /locus_tag="JN001_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative fimbrial-like adhesin protein"
                     /protein_id="HAY9052099.1"
                     /translation="MEIRIMLFILMMMVMPVSYAACYSELSVQHNLVVQGDFALTQTQ
                     MATYEHNFNDSSCVSTNTITPMSPSDIIVGLYNDTIKLNLHFEWTNKNNITLSNNQTS
                     FTNGYSVTVTPAASNAKVNVSAGGGGSVMINGVATLSSASSSTRGSAAVQFLLCLLGG
                     KSWDACVNSYRNALAQNAGVYSFNLTLSYNPITTTCKPDDLLITLEGIPVSQLPATGN
                     KATINSKKGDIILRCKNLLGQQNQTSRKMQVYLSSSDLLTNSNTILKGAEDNGVGFIL
                     ESNGSPVTLLNITDNSKGYTNLKEIAAKSKLTDTTVSIPITASYYVYDTNKVKSGALE
                     ATALINVKYD"
     gene            complement(4964..5302)
                     /gene="rcnB"
                     /locus_tag="JN001_000780"
     CDS             complement(4964..5302)
                     /gene="rcnB"
                     /locus_tag="JN001_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416610.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II) efflux transporter accessory
                     subunit RcnB"
                     /protein_id="HAY9052100.1"
                     /translation="MTIKNKMLLGALLLVTSAAWAAPATAGSTNTSGISKYELSSFIA
                     DFKHFKPGDTVPEMYRTDEYNIKQWQLRNLPAPDAGTHWTYMGGAYVLISDTDGKIIK
                     AYDGEIFYHR"
     gene            complement(5521..6345)
                     /locus_tag="JN001_000781"
     CDS             complement(5521..6345)
                     /locus_tag="JN001_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel/cobalt efflux protein RcnA"
                     /protein_id="HAY9052101.1"
                     /translation="MTEFTTLLQQGNAWFFIPSAILLGALHGLEPGHSKTMMAAFIIA
                     IKGTIKQAVMLGLAATISHTAVVWLIAFGGMVISKRFTAQSAEPWLQLISAVIIISTA
                     FWMFWRTWRGERNWLENMHGHDYEHHHHDHEHHHDHGHHHHHEHGEYQDAHARAHAND
                     IKRRFDGREVTNWQILLFGLTGGLIPCPAAITVLLICIQLKALTLGATLVVSFSIGLA
                     LTLVTVGVGAAISVQQVAKRWSGFNTLAKRAPYFSSLLIGLVGVYMGVHGFMGIMR"
     gene            6466..6738
                     /gene="rcnR"
                     /locus_tag="JN001_000782"
     CDS             6466..6738
                     /gene="rcnR"
                     /locus_tag="JN001_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni(II)/Co(II)-binding transcriptional repressor
                     RcnR"
                     /protein_id="HAY9052102.1"
                     /translation="MSHTIRDKQKLKARASKIQGQVVALKKMLDEPHECAAVLQQIAA
                     IRGAVNGLMREVIKGHLTEHIVHQGDELKREEDLDVVLKVLDSYIK"
     regulatory      6830..6926
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            6961..7749
                     /gene="thiM"
                     /locus_tag="JN001_000783"
     CDS             6961..7749
                     /gene="thiM"
                     /locus_tag="JN001_000783"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HAY9052103.1"
                     /translation="MQVDLLGSAQSAHALHLFHQHSPLVHCMTNDVVQTFTANTLLAL
                     GASPAMVIETEEASQFAAIASALLINVGTLTQPRAQAMRAAVEQAKSSQTPWTLDPVA
                     VGALDYRRHFCHELLSFKPAAIRGNASEIMALAGIANGGRGVDTTDAAANAIPAAQTL
                     ARETGAIVVVTGEMDYVTDGHRIIGIHGGDPLMTKVVGTGCALSAVVAACCALPGDTL
                     ENVASACHWMKQAGERAVARSEGPGSFVPHFLDALWQLTQEVQA"
     gene            7746..8546
                     /gene="thiD"
                     /locus_tag="JN001_000784"
     CDS             7746..8546
                     /gene="thiD"
                     /locus_tag="JN001_000784"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HAY9052104.1"
                     /translation="MKRINALTIAGTDPSGGAGIQADLKTFSALGAYGCSVITALVAQ
                     NTRGVQSVYRIEPDFVAAQLDSVFSDVRIDTTKIGMLAETDIVEAVAERLQRYQIQNV
                     VLDTVMLAKSGDPLLSPSAVATLRSRLLPQVSLITPNLPEAAALLDAPHARTEQEMLE
                     QGRSLLAMGCGAVLMKGGHLDDEQSPDWLFTREGEQRFTAPRIMTKNTHGTGCTLSAA
                     LAALRPRHTNWADTVQEAKSWLSSALAQADTLEVGHGIGPVHHFHAWW"
     gene            8611..9429
                     /locus_tag="JN001_000785"
     CDS             8611..9429
                     /locus_tag="JN001_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl hydrolase 25 family protein"
                     /protein_id="HAY9052105.1"
                     /translation="MQLRITSRKKLTSLLCALGLISIVAIYPRQTVNFFYSTAVQITD
                     YIHFYGYRPVKSFAIRIPASYTIHGIDVSRWQERIDWQRVAKMRDNGIRLQFAFIKAT
                     EGEKLVDPYFSRNWQLSRENGLLRGAYHYFSPSVAAPVQVRLFLQTVDFSQGDFPAVL
                     DVEERGKLSAKELRKRVSQWLKMVEKSTGKKPIIYSGAVFYHTNLAGYFNEYPWWVAH
                     YYQRRPDNDGMAWRFWQHSDRGQVDGINGPVDFNVFNGTVEELQAFVDGIKETP"
     gene            9481..10227
                     /locus_tag="JN001_000786"
     CDS             9481..10227
                     /locus_tag="JN001_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY9052106.1"
                     /translation="MEQAHTQLIAQLNERILAADNTPLYIKFAETVKNAVRSGVLEHG
                     NILPGERDLSQLTGVSRITVRKAMQALEEEGVVTRSRGYGTQINNIFEYSLKEARGFS
                     QQVVLRGKKPDTLWVNKRVVKCPEEVAQQLAVEAGSDVFLLKRIRYVDEEAVSIEESW
                     VPAHLIHDVDAIGISLYDYFRSQHIYPQRTRSRVSARMPDAEFQSHIQLDSKIPVLVI
                     KQVALDQQQRPIEYSISHCRSDLYVFVCEE"
     gene            complement(10201..11166)
                     /locus_tag="JN001_000787"
     CDS             complement(10201..11166)
                     /locus_tag="JN001_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9052107.1"
                     /translation="MSGARLHTLLPELTTRQPVMVVGAAVIDVIADAYALPWRGCDIE
                     LKQQSVNVGGCALNIAVALKRLGIEAGNALPLGQGVWAEIIRNRMAKEGLISLIDNAE
                     GDNGWCLALVEPDGERTFMSFSGVENQWNRQWLARLTVAPGSLLYFSGYQLASPCGEL
                     LVEWLEELQDVTPFIDFGPRIGDIPDALLARIMACRPLVSLNRQEAEIAAERFALSAE
                     ITTLGKQWQEKFAAPLIVRLDKEGAWYFSNDASGCIPAFPTQVVDTIGAGDSHAGGVL
                     AGLASGLPLADAVLLGNAVASWVVGHRGGDCAPTREELLLAHKNV"
     gene            complement(11163..12167)
                     /locus_tag="JN001_000788"
     CDS             complement(11163..12167)
                     /locus_tag="JN001_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribosylglycohydrolase family protein"
                     /protein_id="HAY9052108.1"
                     /translation="MKTERILGALYGQALGDAMGMPSELWPRSRVKAHFGWIDRFLPG
                     PKENNAACYFNRAEFTDDTSMALCLADALLEREGKIDPDLIGRNILDWALRFDAFNKN
                     VLGPTSKIALNAIRDGKPVAELENNGVTNGAAMRVSPLGCLLPARDVDSFIDDVALAS
                     SPTHKSDLAVAGAVVIAWAISRAIDGESWSAIVDSLPSIARHAQQKRTTTFSASLAAR
                     LEIALKIVRNADGTESASEQLYQVVGAGTSTIESVPCAIALVELAQTDPNRCAVLCAN
                     LGGDTDTIGAMATAICGALHGVNAIDPALKAELDAVNQLDFNRYATALAKYRQQREAV
                     "
     gene            complement(12164..13441)
                     /locus_tag="JN001_000789"
     CDS             complement(12164..13441)
                     /locus_tag="JN001_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052109.1"
                     /translation="MKTTAKLSFMMFVEWFIWGAWFVPLWLWLSKSGFSAGEIGWSYA
                     CTAIAAILSPILVGSITDRFFSAQKVLAVLMFAGALLMYFAAQQTTFAGFFPLLLAYS
                     LTYMPTIALTNSIAFANVPDVERDFPRIRVMSTIGWIASGLACGFLPQILGYADISPT
                     NIPLLITAGSSALLGVFAFFLPDTPPKSTGKMDIKVMLGLDALILLRDKNFLVFFFCS
                     FLFAMPLAFYYIFANGYLTEVGMKNATGWMTLGQFSEIFFMLALPFFTKRFGIKKVLL
                     LGLVTAAIRYGFFIYGSADEYFTYALLFLGILLHGVSYDFYYVTAYIYVDKKAPVHMR
                     TAAQGLITLCCQGFGSLLGYRLGGVMMEKMFAYQEPVNGLTFNWSGMWTFGAVMIAII
                     AVLFMIFFRESDNEITAIKVDDRDIALTQGEVK"
     gene            13698..14750
                     /gene="fbaB"
                     /locus_tag="JN001_000790"
     CDS             13698..14750
                     /gene="fbaB"
                     /locus_tag="JN001_000790"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HAY9052110.1"
                     /translation="MTDIAQLLGKDADNLLQHRCMTIPSDQLYLPGHDYVDRVMIDNN
                     RPPAVLRNMQTLYNTGRLAGTGYLSILPVDQGVEHSAGASFAANPLYFDPKNIVELAI
                     EAGCNCVVSTYGVLASVSRRYAHRIPFLVKLNHNETLSYPNTYDQTLYASVEQAFNMG
                     AVAVGATIYFGSEESRRQIEEISAAFERAHELGMVTVLWAYLRNSAFKKDGVDYHVSA
                     DLTGQANHLAATIGADIVKQKMAENNGGYKAINYGYTDDRVYSKLTSENPIDLVRYQL
                     ANCYMGRAGLINSGGAAGGETDLSDAVRTAVINKRAGGMGLILGRKAFKKSMADGVKL
                     INAVQDVYLDSKITIA"
     gene            15058..15912
                     /gene="gatY"
                     /locus_tag="JN001_000791"
     CDS             15058..15912
                     /gene="gatY"
                     /locus_tag="JN001_000791"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatY"
                     /protein_id="HAY9052111.1"
                     /translation="MHVVSTKQMLNNAQRGGYAVPAFNIHNLETMQVVVETAANLHAP
                     VIIAGTPGTFTHAGTENLLALVSAMAKQYHHPLAIHLDHHTKFDDIAQKVRSGVRSVM
                     IDASHLPFAQNISRVKEVVDFCHRFDVSVEAELGQLGGQEDDVQVNEADAFYTNPAQA
                     REFAEATGIDSLAVAIGTAHGMYASAPALDFSRLENIRQWVNLPLVLHGASGLSTKDI
                     QQTIKLGICKINVATELKNAFSQALKNYLTEHPEATEPRDYLQSAKSAMRDVVSKVIA
                     DCGCEGRA"
     gene            15941..17143
                     /gene="gatZ"
                     /locus_tag="JN001_000792"
     CDS             15941..17143
                     /gene="gatZ"
                     /locus_tag="JN001_000792"
                     /EC_number="4.1.2.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase subunit GatZ"
                     /protein_id="HAY9052112.1"
                     /translation="MKTLIARHKAGEHIGICSVCSAHPLVIEAALAFDRNSTRKVLIE
                     ATSNQVNQFGGYTGMTPADFREFVFTIADKVGFARERIILGGDHLGPNCWQQENADAA
                     MEKSVELVKEYVRAGFSKIHLDASMSCAGDPIPLAPETVAERAAVLCFAAESVATDCQ
                     REQLSYVIGTEVPVPGGEASAIQSVHITHVEDAANTLRTHQKAFIVRGLTEALTRVIA
                     IVVQPGVEFDHSNIIHYQPQEAQPLAQWIENTRMVYEAHSTDYQTRTAYWELVRDHFA
                     ILKVGPALTFALREAIFALAQIEQELIAPENRSGCLAVIEEVMLDEPQYWKKYYRTGF
                     NDSLLDIRYSLSDRIRYYWPHSRIKNSVETMMVNLEGVDIPLGMISQYLPKQFERIQS
                     GELSAIPH"
     gene            17213..17665
                     /gene="gatA"
                     /locus_tag="JN001_000793"
     CDS             17213..17665
                     /gene="gatA"
                     /locus_tag="JN001_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIA"
                     /protein_id="HAY9052113.1"
                     /translation="MTNLFVRSGISFVDRSEVLTHIGNEMLAKGVVHDTWPQALIARE
                     AEFPTGIMLEQHAIAIPHCEAIHAKSSAIYLLRPTNKVHFQQADDDNDVEVSLVIALI
                     VENPQQQLKLLRCLFGKLQQPDIVETLITLPETQLKEYFTKYVLDSDE"
     gene            17696..17980
                     /gene="gatB"
                     /locus_tag="JN001_000794"
     CDS             17696..17980
                     /gene="gatB"
                     /locus_tag="JN001_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIB"
                     /protein_id="HAY9052114.1"
                     /translation="MKRKIIVACGGAVATSTMAAEEIKELCQNHNIPVELIQCRVNEI
                     ETYMDGVHLICTTARVDRSFGDIPLVHGMPFVSGVGIEALQNKILTILQG"
     gene            17984..19339
                     /locus_tag="JN001_000795"
     CDS             17984..19339
                     /locus_tag="JN001_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HAY9052115.1"
                     /translation="MFSEVMRYILDLGPTVMLPIVIIIFSKILGMKAGDCFKAGLHIG
                     IGFVGIGLVIGLMLDSIGPAAKAMAENFDLNLHVVDVGWPGSSPMTWASQIALVAIPI
                     AILVNVAMLLTRMTRVVNVDIWNIWHMTFTGALLHLATGSWMIGMAGVVIHAAFVYKL
                     GDWFARDTRNFFELEGIAIPHGTSAYMGPIAVLVDAIIEKIPGVNRIKFSADDIQRKF
                     GPFGEPVTVGFVMGLIIGILAGYDVKGVLQLAVKTAAVMLLMPRVIKPIMDGLTPIAK
                     QARSRLQAKFGGQEFLIGLDPALLLGHTAVVSVSLIFIPLTILIAVCVPGNQVLPFGD
                     LATIGFFVAMAVAVHRGNLFRTLISGVIIMSITLWIATQTIGLHTQLAANAGALKAGG
                     MVASMDQGGSPITWLLIQVFSPQNIPGFIIIGAIYLTGIFITWRRARGFIKQEKAVLA
                     E"
     gene            19387..20427
                     /gene="gatD"
                     /locus_tag="JN001_000796"
     CDS             19387..20427
                     /gene="gatD"
                     /locus_tag="JN001_000796"
                     /EC_number="1.1.1.251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY9052116.1"
                     /translation="MKSVVNDTDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPR
                     IFKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQ
                     CAKYDFIGSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCE
                     NKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSFGSMQTFNSSEMSAP
                     QMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKI
                     LRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFTQAVRDIA
                     RNAMPGKVLLIP"
     gene            20527..21306
                     /locus_tag="JN001_000797"
     CDS             20527..21306
                     /locus_tag="JN001_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY9052117.1"
                     /translation="MTMNSFERRNKIIQLVNEQGTVLVQDLAGVFAASEATIRADLRF
                     LEQKGVVTRFHGGAAKIMSGNSETETQEVGFKERFQLASAPKNRIAQAAVKMIHEGMT
                     VILDSGSTTMLIAEGLMTAKNITVITNSLPAAFALSENKDITLVVCGGTVRHKTRSMH
                     GSIAERSLQDINADLMFVGADGIDAVNGITTFNEGYSVSGAMVTAANKVIAVLDSSKF
                     NRRGFNQVLPIEKINIIITDDAVSEVDKLALQKTRVKLITV"
     gene            complement(21388..22286)
                     /gene="yegS"
                     /locus_tag="JN001_000798"
                     /pseudo
     CDS             complement(21388..22286)
                     /gene="yegS"
                     /locus_tag="JN001_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310919.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipid kinase YegS"
     gene            22700..23018
                     /locus_tag="JN001_000799"
                     /pseudo
     CDS             22700..23018
                     /locus_tag="JN001_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416589.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(23348..24709)
                     /locus_tag="JN001_000800"
     CDS             complement(23348..24709)
                     /locus_tag="JN001_000800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-hydroxyuridine modification protein YegQ"
                     /protein_id="HAY9052118.1"
                     /translation="MFKPELLSPAGTLKNMRYAFAYGADAVYAGQPRYSLRVRNNEFN
                     HENLQLGINEAHALGKKFYVVVNIAPHNAKLKTFIRDLKPVVEMGPDALIMSDPGLIM
                     LVREYFPEMPIHLSVQANAVNWATVKFWQQMGLTRVILSRELSLEEIEEIRNQVPDME
                     IEIFVHGALCMAYSGRCLLSGYINKRDPNQGTCTNACRWEYNVQEGKEDDVGNIVHKY
                     EPIPVQNVEPTLGIGAPTDKVFMIEEAQRPGEYMTAFEDEHGTYIMNSKDLRAIAHVE
                     RLTKMGVHSLKIEGRTKSFYYCARTAQVYRKAIDDAAAGKPFDTSLLETLEGLAHRGY
                     TEGFLRRHTHDDYQNYEYGYSVSDRQQFVGEFTGERKGDLAAVAVKNKFSVGDSLELM
                     TPQGNINFTLEHMENAKGVAMPVAPGDGYTVWLPVPQDLELNYALLMRNFSGETTRNP
                     HGK"
     gene            complement(25030..26430)
                     /locus_tag="JN001_000801"
     CDS             complement(25030..26430)
                     /locus_tag="JN001_000801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000911981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HEAT repeat domain-containing protein"
                     /protein_id="HAY9052119.1"
                     /translation="MLKGLRTLFSRRVLFNVEMNNSVDCELLLIQQQLQALIAEPGNY
                     LAHDCDLNDTLVLCQLTHHHNGYIREKAVQYLGHKEDVAAIEELLLAANDWVKEVRLA
                     ATIALRHLMKDKNAAAFAVNLPMIRNLLQCQRYDHRAFVDEILRYLLTENNRPQLTYW
                     LTCPDKKLSRAVLQTLIEYGYFNDESSLLSILDKPDEGLRMLATTHWLRQQLPLSEAV
                     LTRLLKDRWPRIRQATLFSLTDRAIEMPPALHSTLLLDNNMLIRLRAKNMLHEVMDVP
                     QFWRHVVTSAEYTPSQRRAALYGLDSIHDPNILKLAEWGLSQNVFPLRLAAMHILAKA
                     NPRCGVKETILTTLANPDAAGLRFMVNICVWCRVPLTFEEIRQLQENAPSVKHACAYC
                     RLYHNLNKWDGLILLLQSQHKLTEEFAGKQLAIWQRNFNLSGIQPNALQRQQLQALFT
                     RNPELHNRLWGYIPFK"
     gene            complement(26553..26885)
                     /locus_tag="JN001_000802"
     CDS             complement(26553..26885)
                     /locus_tag="JN001_000802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310915.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YegP family protein"
                     /protein_id="HAY9052120.1"
                     /translation="MAGWFELSKSSDNQFRFVLKAGNGETILTSELYTSKASAEKGIA
                     SVRSNSPQEERYEKKTASNGKFYFNLKAANHQIIGSSQMYATAQSRETGIASVKANGT
                     SQTVKDNT"
     gene            complement(27076..27798)
                     /gene="baeR"
                     /locus_tag="JN001_000803"
     CDS             complement(27076..27798)
                     /gene="baeR"
                     /locus_tag="JN001_000803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BaeR"
                     /protein_id="HAY9052121.1"
                     /translation="MTELPIDENTPRILIVEDEPKLGQLLIDYLRAASYAPTLISHGD
                     QVLPYVRQTPPDLILLDLMLPGTDGLTLCREIRRFSDIPIVMVTAKIEEIDRLLGLEI
                     GADDYICKPYSPREVVARVKTILRRCKPQRELQQQDAESPLIIDEGRFQASWRGKMLD
                     LTPAEFRLLKTLSHEPGKVFSREQLLNHLYDDYRVVTDRTIDSHIKNLRRKLESLDAE
                     QSFIRAVYGVGYRWEADACRIV"
     gene            complement(27795..29198)
                     /gene="baeS"
                     /locus_tag="JN001_000804"
     CDS             complement(27795..29198)
                     /gene="baeS"
                     /locus_tag="JN001_000804"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     BaeS"
                     /protein_id="HAY9052122.1"
                     /translation="MKFWRPGITGKLFLAIFATCIVLLISMHWAVRISFERGFIDYIK
                     HGNEQRLQLLSDALGEQYAQHGNWRFLRNNDRFVFQILRSFEHDNSEDKPGPGMPPHG
                     WRTQFWVVDQNNKVLVGPRAPIPPDGTRRPILVNGAEVGAVIASPVERLTRNTDINFD
                     KQQRQTSWLIVALATLLAALATFLLARGLLAPVKRLVDGTHKLAAGDFTTRVTPTSED
                     ELGKLAQDFNQLASTLEKNQQMRRDFMADISHELRTPLAVLRGELEAIQDGVRKFTPE
                     TVASLQAEVGTLTKLVDDLHQLSMSDEGALAYQKAPVDLIPLLEVAGGAFRERFASRG
                     LKLQFSLPDSITVFGDRDRLMQLFNNLLENSLRYTDSGGSLKISAEQHDKTVRLTFAD
                     SAPGVSDEQLQKLFERFYRTEGSRNRASGGSGLGLAICLNIVEAHNGRIIAAHSPFGG
                     VSITVELPLERDLQREV"
     gene            complement(29195..30611)
                     /locus_tag="JN001_000805"
                     /pseudo
     CDS             complement(29195..30611)
                     /locus_tag="JN001_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            complement(30612..33689)
                     /gene="mdtC"
                     /locus_tag="JN001_000806"
     CDS             complement(30612..33689)
                     /gene="mdtC"
                     /locus_tag="JN001_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtC"
                     /protein_id="HAY9052123.1"
                     /translation="MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPV
                     IMVSASLPGASPETMASSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDIN
                     GAARDVQAAINAAQSLLPSGMPSRPTYRKANPSDAPIMILTLTSDTYSQGKLYDFAST
                     QLAPTISQIDGVGDVDVGGSSLPAVRVGLNPQALFNQGVSLDDVRTAISNANVRKPQG
                     ALEDGTHRWQIQTNDELKTAAEYQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTN
                     AKPAILLMIRKLPEANIIQTVDSIRAKLPELQETIPAAIDLQIAQDRSPTIRASLEEV
                     EQTLIISVALVILVVFLFLRSGRATIIPAVAVPVSLIGTFAAMYLCGFSLNNLSLMAL
                     TIATGFVVDDAIVVLENIARHLEAGMKPLQAALQGTREVGFTVLSMSLSLVAVFLPLL
                     LMGGLPGRLLREFAVTLSVAIGISLLVSLTLTPMMCGWMLKASKPREQKRLRGFGRML
                     VALQQGYGKSLKWVLNHTRLVGVVLLGTIALNIWLYISIPKTFFPEQDTGVLMGGIQA
                     DQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTGGSRVNSGMMFITLKPRDERSETAQ
                     QIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNASYQYTLLSDDLAALREWEPKIRK
                     KLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDVQAANSLLNNAFGQRQISTIY
                     QPMNQYKVVMEVEPRYTQDISALEKMFVINNEGKAIPLSYFAKWQPANAPLSVNHQGL
                     SAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAGTAQVFQETMNSQVILI
                     IAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNAPFSLIALIGIMLLI
                     GIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLAALFGALPLVLSG
                     GDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPKQTVTE"
     gene            complement(33690..36812)
                     /gene="mdtB"
                     /locus_tag="JN001_000807"
     CDS             complement(33690..36812)
                     /gene="mdtB"
                     /locus_tag="JN001_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit MdtB"
                     /protein_id="HAY9052124.1"
                     /translation="MQVLPPSSTGGPSRLFIMRPVATTLLMVAILLAGIIGYRALPVS
                     ALPEVDYPTIQVVTLYPGASPDVMTSAVTAPLERQFGQMSGLKQMSSQSSGGASVITL
                     QFQLTLPLDVAEQEVQAAINAATNLLPSDLPNPPVYSKVNPADPPIMTLAVTSTAMPM
                     TQVEDMVETRVAQKISQISGVGLVTLSGGQRPAVRVKLNAQAIAALGLTSETVRTAIT
                     GANVNSAKGSLDGPSRAVTLSANDQMQSAEEYRQLIIAYQNGAPIRLGDVATVEQGAE
                     NSWLGAWANKEQAIVMNVQRQPGANIISTADSIRQMLPQLTESLPKSVKVTVLSDRTT
                     NIRASVDDTQFELMMAIALVVMIIYLFLRNIPATIIPGVAVPLSLIGTFAVMVFLDFS
                     INNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAALKGAGEIGFTIISLIFS
                     LIAVLIPLLFMGDIVGRLFREFAITLAVAILISAVVSLTLTPMMCARMLSQESLRKQN
                     RFSRASEKMFDRIIAAYGRGLAKVLNHPWLTLSVALSTLLLSVLLWVFIPKGFFPVQD
                     NGIIQGTLQAPQSSSFANMAQRQRQVADVILQDPAVQSLTSFVGVDGTNPSLNSARLQ
                     INLKPLDERDDRVQKVIARLQTAVDKVPGVDLFLQPTQDLTIDTQVSRTQYQFTLQAT
                     SLDALSTWVPQLMEKLQQLPQLSDVSSDWQDKGLVAYVNVDRDSASRLGISMADVDNA
                     LYSAFGQRLISTIYTQANQYRVVLEHNTEITPGLAALDTIRLTSSDGGVVPLSSIAKV
                     EQRFAPLSINHLDQFPVTTISFNVPDNYSLGDAVQAIMDTEKTLNLPVDITTQFQGST
                     LAFQSALGSTVWLIVAAVVAMYIVLGILYESFIHPITILSTLPTAGVGALLALMIAGS
                     ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIYQACLLRFRPILMTT
                     LAALLGALPLMLSTGVGAELRRPLGIGMVGGLIVSQVLTLFTTPVIYLLFDRLALWTK
                     SRFARHEEEA"
     gene            complement(36812..38059)
                     /gene="mdtA"
                     /locus_tag="JN001_000808"
     CDS             complement(36812..38059)
                     /gene="mdtA"
                     /locus_tag="JN001_000808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416578.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter subunit MdtA"
                     /protein_id="HAY9052125.1"
                     /translation="MKGSYKSRWVIVIVVVIAAIAAFWFWQGRNDSRSAAPGATKQAQ
                     QSPAGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTIIAANTVTVRSRVDGQLMALH
                     FQEGQQVKAGDLLAEIDPSQFKVALAQTQGQLAKDKATLANARRDLARYQQLAKTNLV
                     SRQELDAQQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQIS
                     SGDTTGIVVITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTL
                     LSLDNQIDATTGMIKVKARFNNQNDVLFPNQFVNARMLVDTEQNAVVIPTAALQMGNE
                     GHFVWVLNSENKVSKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEVVE
                     AQSATTPEEKATSREYAKKGARS"
     gene            38338..38394
                     /locus_tag="JN001_000809"
     CDS             38338..38394
                     /locus_tag="JN001_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY9052126.1"
                     /translation="MMKLLIIVVLLVISWPAY"
BASE COUNT         9859 a         9431 c         9989 g         9433 t
ORIGIN      
        1 tcttaacaac caaaaataaa ttttattaag gaacatatta tgaaacgttc aattattgct
       61 gccgctgtct tttcttcttt ttttatgagc gctggagtat ttgctgcaga cgttgatacc
      121 ggaacattaa ctattaaggg gaatattgca gaatctccgt gtaaattcga agcgggtggt
      181 gattcagtaa gtattaatat gccgactgta ccaaccagtg tctttgaagg taaagctaaa
      241 tattctacct atgatgatgc agtcggtgta accagcagca tgttaaaaat tagctgcccg
      301 aaagaagttg ctggtgtaaa actctcgttg attaccaacg ataaaataac cggtaacgat
      361 aaggcgatag ccagtagcaa cgataccgtg ggttactatc tctatttagg tgataacagc
      421 gatgtcctgg atgtttctgc accttttaac attgagagtt ataaaacagc ggaaggtcaa
      481 tatgctattc cgtttaaagc aaaatacctg aaactgacag ataactcagt gcaatcaggt
      541 gatgtgttat cttctctggt tatgcgtgtg gcgcaggatt aataaataaa attgtaagtt
      601 tctccaggta ataaacatgg ccgctatccc atggcggcct tttaatttaa gaggcattaa
      661 aatgaaagga ttattatctt tactcatttt ttctatggtc cttcctgcac atgccggaat
      721 tgttatctac gggacgcgca ttatttaccc ggcagaaaat aaagaagtga tggtgcagtt
      781 gatgaaccag ggaaaccgtt cttcgctgct gcaggcgtgg attgatgatg gcgatacgtc
      841 attaccacca gaaaaaattc aggttccttt catgttaacg ccaccagtgg caaaaatagg
      901 ggcaaattcc gggcagcaag taaaaatcaa aattatgccg aataaactgc ccactaataa
      961 agaaagcatt ttttatctga atgttctgga tattccacca aatagtccag agcaagaagg
     1021 taagaatgca ctgaagtttg cgatgcaaaa cagaattaag ttgttttacc ggccagcggg
     1081 tattgctccg gtaaataaag cgacatttaa aaaattgctg gtaaatcgca gtggcaatgg
     1141 tttggtgata aaaaatgact cagctaattg ggtgacgatt tcggatgtca aagctaataa
     1201 tgtcaaagtc aattatgaaa ctattatgat tgccccctta gaaagtcaga gtgttaatgt
     1261 caaaagtaat aatgcaaata actggcatct gaccattatc gatgaccatg gcaactatat
     1321 tagtgacaaa atttaattgc aggagctgcc tatgttgaga atgaccccac ttgcatcagc
     1381 aatcgtagcg ttattgctcg gcattgaagc ttatgcagct gaagaaacct ttgataccca
     1441 ttttatgata ggtggaatga aagaccagca ggttgcaaat attcgtcttg atgataatca
     1501 acccttaccg gggcagtatg acatcgatat ttatgtcaat aagcaatggc gcgggaaata
     1561 tgagattatt gttaaagaca acccgcaaga aacatgttta tcaagagaag ttatcaagcg
     1621 gttaggcatt aatagcgata acttcgccag cggtaagcaa tgtttaacat ttgagcaact
     1681 tgttcagggt gggagctata cctgggatat cggggttttt cgtctcgatt tcagtgtccc
     1741 gcaggcctgg gtggaagaac tggaaagtgg ctatgttcca ccggaaaact gggagcgggg
     1801 tattaatgcg ttttatacct cttattatct gagtcagtat tacagcgact ataaagcgtc
     1861 gggtaataac aagagtacat atgtacgttt taacagcggg ttaaatttac tggggtggca
     1921 actgcattct gatgccagtt tcagtaaaac aaataacaat ccaggggggt ggaaaagcaa
     1981 taccctgtat ctggaacgtg gatttgccca acttctcggc acgcttcgcg tgggtgatat
     2041 gtacacatca agcgatattt ttgattctgt tcgcttcaga ggtgtgcggt tgtttcgtga
     2101 tatgcagatg ttgcctaact cgaaacaaaa ttttacgcca cgggtgcagg ggattgctca
     2161 gagtaacgcg ctggtaacta ttgaacagaa tggttttgtc gtttatcaga aagaggttcc
     2221 tcctggcccg ttcgcgatta cagatttgca gttggccggt ggtggagcag atcttgatgt
     2281 cagcgtgaaa gaggcggacg gttcggtaac cacctatctg gtgccttatg cagcggtgcc
     2341 aaatatgctg caacccggcg tgtcgaaata tgattttgcg gcgggtcgta gccatattga
     2401 aggggcgagc aaacaaagtg aatttgtcca ggtgggttat cagtatggtt ttaataattt
     2461 attgacgctg tatggcggct cgatggtcgc gaataattat tacgcgttta ctttggggac
     2521 tggctggaat acacgcattg gtgccatttc cgtcgatgcc actaagtcgc atagtaaaca
     2581 agacaacggc gatgtgtttg acgggcaaag ttatcaaatt gcctacaaca aatttgtgag
     2641 ccaaacgtcg acgcgttttg gtcttgcggc ctggcgttat tcatcgcgtg attaccggac
     2701 atttaatgat cacgtttggg caaacaataa agataattat cgccgtgatg aaaacgatgt
     2761 ctatgacatt gccgattatt accagaacga ttttggccgt aaaaatagct tttctgccaa
     2821 tatgagccag tcattgccag aaggctgggg ttctgtgtcc ttaagtacgt tatggcgaga
     2881 ttactgggga cgtagcggca gcagtaagga ttatcagttg agttattcca ataactggcg
     2941 gcggataagc tataccctcg cggcaagcca ggcttatgac gagaatcatc atgaagagaa
     3001 acgatttaat atttttatat cgattccctt tgattggggt gatgacgtta cgacgcctcg
     3061 tcggcaaata tatatgtcta actcaacgac gtttgatgat caggggtttg cctcaaataa
     3121 tacgggatta tcaggaacag tagggagtcg ggatcagttc aattatggtg tcaacctgag
     3181 tcatcaacat cagggaaatg aaacgacagc tggggcgaat ttgacctgga acgcgccggt
     3241 tgcgacagtg aatggcagtt atagtcagtc gagtacttat cgacaggctg gagccagtgt
     3301 ttcagggggc attgtcgcct ggtcgggtgg cgttaatctg gcgaaccgtc tttccgaaac
     3361 gtttgctgtg atgaatgcgc caggaattaa agatgcttat gtcaatgggc aaaaatatcg
     3421 cacaacaaac cgtaatggag tggtgatata cgacggaatg acaccttatc gggaaaatca
     3481 cctgatgctg gatgtgtcgc aaagcgatag cgaagcagaa ttacgtggca accggaaaat
     3541 tgccgcccct tatcgcggcg cggttgtact ggttaatttt gataccgatc agcgcaagcc
     3601 ctggtttata aaagcgttaa gagcggatgg gcaaccatta atgtttggtt atgaagtcaa
     3661 tgatatccat ggtcataata ttggcgttgt cggtcaggga agccagttat ttattcgcac
     3721 caatgaagta ccgccatcgg ttaatgtagc aattgataag caacaaggac tttcatgcac
     3781 aatcaccttc ggtaaagaga ttgatgaaag tagaaattat atttgccagt aatagtcagg
     3841 tggttctatg gaaattcgca taatgctatt tatattaatg atgatggtta tgcctgtgag
     3901 ctatgcggca tgttatagtg agttatctgt tcagcacaac ttggttgttc agggggattt
     3961 tgcacttact caaacacaaa tggcgacata tgagcataat tttaatgatt cgtcatgcgt
     4021 gagtacaaat actatcaccc ctatgagccc gtcggatatt attgttggac tttataacga
     4081 taccattaaa ttaaatttac attttgaatg gaccaataaa aataacatca cgttgtcaaa
     4141 taatcagacc agtttcacca atggttattc ggtaacggtg acacctgcgg ccagtaatgc
     4201 aaaagtgaat gtttctgcgg ggggcggcgg ttcagtgatg attaatggtg ttgcgacatt
     4261 atccagtgct tcatcatcga cacgcgggag tgccgcagta caatttctac tgtgtttatt
     4321 aggtggcaag tcatgggatg catgtgtaaa tagctataga aatgcattgg cacaaaatgc
     4381 aggtgtctat tcctttaatc tgaccttgtc atacaacccg ataaccacaa cctgcaaacc
     4441 ggacgattta ttaattactt tagagggtat tcccgtttca caattaccag ccacaggtaa
     4501 caaagcaaca ataaatagta aaaaagggga tattattctg cgttgtaaaa atttattagg
     4561 tcaacaaaat caaacatcac ggaaaatgca ggtgtattta tcaagttctg acttgttaac
     4621 caacagcaac acaatactga aaggtgcgga agataatggc gtaggattta ttcttgaaag
     4681 taatggttcg ccagtcacac ttttaaatat cactgataac agcaaaggat acacaaattt
     4741 aaaagaaatt gcggcaaagt caaaacttac agatacaacg gtttcaattc cgataacagc
     4801 cagttactac gtctacgata caaacaaagt taaatctggc gcattggagg caaccgcatt
     4861 aatcaacgtg aaatacgact aataacaagc aagacgagca agtggctaat aataaaaaat
     4921 aacaaggtgt ctgcatttcc ccctcatgat gagggggatt tttttagcga tgataaaaaa
     4981 tctcaccgtc gtaggcttta atgattttac cgtcggtgtc gctgatcaac acgtacgcgc
     5041 cacccatata ggtccagtgc gtcccggcat caggcgcggg caggttacgc aactgccact
     5101 gcttaatgtt gtactcatcg gtacggtaca tttctggtac ggtgtcccct ggtttgaaat
     5161 gcttaaagtc agcaatgaaa ctacttaact catacttaga aattcccgag gtattggtcg
     5221 aacccgcggt ggctggtgcg gcccaggcgg cactggtaac cagcaaaagc gcacccagca
     5281 acatcttatt tttaatggtc ataaactctc cactttgggg atctgtaata tcagtcgcat
     5341 atctttcctg ccatacaata taactgacaa gcgatatttt gttagtgatc ccatgatttc
     5401 gtaaaaagtg taaatgaaag gatgccctaa aagcatcctt agcgagcaga gagtcagcgg
     5461 aaatagctga tttaagaatc atcctgggct gaagataaca tgcaagccta aaggattgag
     5521 ttatcgcatt atgcccatga agccatgtac gcccatatac acaccgacta agccaatcaa
     5581 cagactggaa aaataggggg cgcgtttagc gagagtgtta aatccgctcc agcgttttgc
     5641 gacctgctga acgctgattg ctgcgccaac gcctacggtg acaagcgtta acgccaggcc
     5701 aatgctgaaa ctgacgacca gtgttgcgcc cagtgtcagg gctttcaact gaatgcatat
     5761 caacagcacg gtaattgctg ccgggcaggg gataaggcca ccggttaagc caaataacaa
     5821 aatttgccag ttggtgacct ctctaccatc aaagcgtcgt ttaatgtcat tggcatgggc
     5881 tcgtgcatgg gcatcctgat actcgccatg ttcgtgatgg tgatgatgtc catggtcgtg
     5941 gtgatgttcg tgatcgtgat gatgatgctc ataatcatgc ccgtgcatat tctccagcca
     6001 gttgcgttcg ccgcgccagg tacgccagaa catccagaac gcggtgctaa taatgatcac
     6061 tgcggaaatc agctggagcc acggttctgc tgattgagca gtaaagcgct tgctgatcac
     6121 catcccgcca aaggcaatta accagaccac tgcggtatgc gaaatagttg ctgccagtcc
     6181 gagcatcacc gcttgtttaa tggtgccttt gatggcgatg ataaacgccg ccatcatcgt
     6241 ttttgagtgc cctggttcca ggccatgaag cgcaccaagt aagatggcgc tggggatgaa
     6301 gaaccaggcg tttccttgct gaagaagagt tgtaaattcg gtcatgataa taattcttag
     6361 tattaattcg gcaatctgat tctactcccc cccagtacct gatactaccc cccagtagat
     6421 taatagtgct atgatttttc atattcttgt taaccaggtg ttgccatgtc tcatacaatc
     6481 cgtgataaac agaaactgaa agcgcgtgcc agtaagattc agggccaggt cgtggcgctc
     6541 aagaaaatgc tcgacgagcc gcacgaatgc gctgcagttt tacaacagat tgctgctatc
     6601 cgtggcgcgg taaacggtct gatgcgggaa gtgattaaag gtcatctgac ggaacacatc
     6661 gttcaccagg gggatgagct aaaacgtgaa gaagatctgg atgtcgttct gaaggtgctg
     6721 gattcatata tcaaataatt tattaacgcg attgtaaaac tgccgttttt cctcgtttac
     6781 aacgcgtgcg ctggacatta ccatcctcct ctgcgattta tcatcgcaac caaacgactc
     6841 ggggtgccct tctgcgtgaa ggctgagaaa tacccgtatc acctgatctg gataatgcca
     6901 gcgtagggaa gtcacggacc accaggtcat tgcttcttca cgttatggca ggagcaaact
     6961 atgcaagtcg acctgctggg ttcagcgcaa tctgcgcacg cgttacacct ttttcaccaa
     7021 cattcccctc ttgtgcactg catgaccaat gatgtggtgc aaacctttac cgccaatacc
     7081 ttgctggcgc tcggtgcatc gccagcgatg gttatcgaaa ccgaagaggc cagtcagttt
     7141 gcggctatcg ccagtgcctt gttgattaac gttggcacac tgacgcagcc acgcgctcag
     7201 gcgatgcgtg ctgccgttga gcaagcaaaa agctctcaaa caccctggac gcttgatcca
     7261 gtagcggtgg gtgcgctcga ttatcgccgc catttttgtc atgaactttt atcttttaaa
     7321 ccggcagcga tacgtggtaa tgcttcggaa atcatggcat tagctggcat tgctaatggc
     7381 ggacggggag tggataccac tgacgccgca gctaacgcga tacccgctgc acaaacactg
     7441 gcacgggaaa ctggcgcaat cgtcgtggtc actggcgaga tggattatgt taccgatgga
     7501 catcgtatca ttggtattca cggtggtgat ccgttaatga ccaaagtggt aggaactggc
     7561 tgtgcattat cggcggttgt cgctgcctgc tgtgcgttac caggcgatac gctggaaaat
     7621 gtcgcatctg cctgtcactg gatgaaacaa gccggagaac gcgcagtcgc cagaagcgag
     7681 gggccaggca gttttgttcc acatttcctt gatgcgctct ggcaattgac gcaggaggtg
     7741 caggcatgaa acgaattaac gctctgacga ttgccggtac tgatccgagt ggtggtgcgg
     7801 ggattcaggc cgatcttaaa accttctcgg cacttggcgc ttatggttgc tcagttatta
     7861 ctgcactggt ggcgcaaaat acccgtggcg tacagtcggt gtatcgcatt gagcctgatt
     7921 ttgtcgccgc ccagctcgat tcggtgttca gcgatgtgcg aatcgatacc actaaaatcg
     7981 gtatgctggc ggaaaccgat attgttgaag cggtggcaga acggttgcaa cgttatcaga
     8041 tccaaaacgt ggtactcgac accgttatgc tggcaaaaag cggcgacccg ctgctttcac
     8101 cttcggcggt tgctacgctg cgcagtcgat tattgccaca ggtttcatta ataacgccaa
     8161 acttgcccga agctgccgcc ttgctcgacg cgccacacgc gcgcaccgaa caggaaatgc
     8221 tggaacaagg gcgatcgctg ttggcgatgg gctgtggcgc agtgctaatg aaaggtggtc
     8281 atctggatga tgagcaaagc ccggactggc tgtttacccg cgagggtgaa caacggttta
     8341 ccgcaccgcg cattatgacc aaaaacaccc acggcactgg ttgtacactc tctgcggcgt
     8401 tggctgcact acgcccgcgc catacaaact gggctgacac cgtacaggag gcaaaaagct
     8461 ggctttcatc ggcgttagcc caggccgaca cgctggaagt tggtcacggt attggtccgg
     8521 ttcaccactt ccacgcctgg tggtgagcac cgtactatag ctgctttggt tattgtcagc
     8581 ctttggcact gacattcagg gatgaaacca atgcagctaa gaattaccag tcgaaaaaaa
     8641 ctcacctctc tattatgcgc tcttgggcta atttccatcg ttgcaattta tccgcgtcag
     8701 acggtgaatt ttttctattc gacagcagtt cagattacag actacatcca cttctacggt
     8761 tatcgcccgg ttaaatcttt cgctattcgc attcctgcca gttacaccat tcacggaata
     8821 gatgtttcgc gctggcagga gcggatcgac tggcagcggg tggcaaaaat gcgcgacaac
     8881 ggtatccgct tacagtttgc ttttattaag gcgacggaag gcgaaaagct ggtggacccc
     8941 tatttttcgc gtaactggca actaagccgc gaaaatggcc tgctgcgcgg ggcatatcat
     9001 tatttctccc cgtcggtagc agcaccggtt caggtgcgat tatttctgca aacggtagat
     9061 ttctcacaag gcgatttccc tgcggtactg gacgtagaag agcgaggaaa attatcggca
     9121 aaagaattac gcaagagggt aagtcagtgg ctaaaaatgg tcgaaaaaag tacggggaaa
     9181 aagccgatta tttactcagg agccgttttt tatcacacga atctggcggg ctatttcaat
     9241 gaatatccgt ggtgggtggc tcactattat caacgtcgtc cggacaatga cggcatggcc
     9301 tggcgcttct ggcagcattc cgaccgtgga caggtagatg gcatcaatgg tccggtggat
     9361 tttaatgtat ttaatggcac ggtggaggag ttgcaggcat tcgttgatgg gattaaagaa
     9421 acgccttaaa taagaagcag tgatatactc ccaccagact ccccggcagg aaaaagacaa
     9481 atggaacaag cgcataccca gctgattgcc caactgaacg agcgtatttt agcggcggat
     9541 aacacgccgc tttatattaa gtttgccgaa acggtaaaaa atgccgtgcg cagcggggtg
     9601 ctggagcatg gcaatatttt gcccggtgag cgtgatttaa gtcagttaac cggcgtttcg
     9661 cgcattacgg tgcgcaaggc gatgcaggcg ctggaagaag agggtgtggt gacgcgttcg
     9721 cgcggttacg gcacgcagat caacaacatc ttcgaatact cgttgaaaga agcgcgaggt
     9781 ttttctcagc aggtggtatt gcgcgggaaa aagcccgata cgctatgggt taacaagcgt
     9841 gtcgtgaaat gtcccgaaga agtcgcgcag cagctggcgg tcgaagcagg aagtgatgtc
     9901 tttttgctta agcgtattcg ctatgtcgat gaagaagcgg tatcgattga ggaatcgtgg
     9961 gttccggcgc atttaattca tgatgttgat gccatcggga tttcacttta tgactatttc
    10021 cgcagccagc acatttaccc acaacgtacg cgttcccgcg ttagcgcccg gatgccggat
    10081 gccgagtttc agtcacatat tcagttagat agcaaaatac cggtgctggt gatcaagcaa
    10141 gtggcgcttg accaacagca acggcctatt gagtacagca ttagccactg tcgcagcgat
    10201 ctatacgttt ttgtgtgcga ggagtagttc ctcgcgcgtt ggcgcacaat caccgccccg
    10261 atgcccgaca acccacgacg ccactgcatt gcccagtaat acggcatccg ccagtggcag
    10321 accagaggcc agcccggcaa gtacgccacc ggcatgactg tcgcccgccc caatggtgtc
    10381 gacaacttgc gttggaaatg ccggaatgca gccagaagcg tcgttgctga aataccatgc
    10441 gccttcttta tcgagacgaa cgatcaacgg cgcggcaaat ttctcctgcc attgcttgcc
    10501 aagtgttgtt atctctgcgg ataaagcaaa acgttcggcg gcaatctcag cctcttgacg
    10561 attgagcgac actaaaggtc gacaggccat gatccgcgcc agtaatgcat ccgggatatc
    10621 gccaatacgt gggccaaaat cgataaacgg cgtcacgtct tgcagctctt ccagccattc
    10681 cactaacaat tcgccgcagg gcgaggccag ttgataaccg gaaaaataga gcaggctgcc
    10741 aggcgcaacg gttaatcgcg ccagccactg gcgattccac tgattttcca caccgctgaa
    10801 tgacataaaa gtgcgttcgc catccggctc aaccagcgcc agacaccagc cgttatcacc
    10861 ttcggcgtta tcgatcaggc tgattaagcc ctcttttgcc atccggttgc gaataatctc
    10921 cgcccacacg ccctgaccga gcggcaaggc attacccgct tcgatgccga ggcgctttaa
    10981 cgccacggca atattcagtg cgcagccgcc aacgttaacg ctctgctgtt tcagttcgat
    11041 atcgcaccca cgccagggga gggcataagc gtcggcgatc acgtcaatga ccgccgcgcc
    11101 gacgaccatc accggctgac gcgtggttaa ttcaggcagc agcgtgtgta atcgagcgcc
    11161 gctcataccg cctcccgttg ttgacgatat ttcgccagcg ctgtggcata gcggttgaaa
    11221 tcaagctgat ttaccgcatc cagttccgcc tttaacgcag gatcgatagc gttaacgcca
    11281 tgcaacgcgc cgcaaattgc cgtcgccata gcaccgatgg tgtctgtgtc gccgccaagg
    11341 ttagcgcaca ggacggcgca gcgattcggg tcggtttgtg ccagttcaac cagcgcaatg
    11401 gcgcacggaa cggactcaat agtgctggta cctgcgccaa cgacctggta aagctgttcg
    11461 ctggcggatt cggtgccgtc ggcattgcgc acaattttca gcgcaatctc cagccgcgcc
    11521 gccagtgagg cgctgaacgt ggtggtgcgt ttttgctggg catgtcgcgc aattgaaggc
    11581 agtgaatcaa caatcgctga ccagctttct ccgtcaatgg cacgagaaat cgcccatgcg
    11641 atgactaccg cgcctgcaac cgccagatcg gatttatggg tcgggctgga cgccagcgct
    11701 acatcatcaa taaaggaatc aacatcacgc gccggaagca aacaacctaa tggcgagacg
    11761 cgcatcgctg cgccgttggt cacgccgttg ttttccagtt cagcaacggg tttaccgtcg
    11821 cgaatggcgt taagcgcaat cttcgaggtc ggacctagta cgtttttgtt aaaggcgtcg
    11881 aaacgcagcg cccagtcgag aatattacgc ccaatcagat ccggatcgat cttgccttca
    11941 cgttccagta acgcatccgc cagacacagc gccatcgagg tatcgtcggt gaattcggcg
    12001 cggttaaaat aacaggccgc gttattctcc tttggtccag gaagaaaacg gtcaatccag
    12061 ccaaagtgtg ctttaacgcg gctgcgtggc caaagctcgg agggcatccc catcgcatcc
    12121 cctaacgcct gcccataaag agcaccgaga atacgttctg ttttcattta acttcccctt
    12181 gtgtcaacgc aatatcgcga tcatcgacct tgatagccgt aatttcgttg tcggattcgc
    12241 ggaaaaaaat catgaacagc acggcgataa tggcaatcat caccgcgcca aaagtccaca
    12301 tcccggacca gttgaaagtc agtccgttta ccggttcctg ataagcgaac atcttttcca
    12361 tcatcacacc gccaagacga tagccgagca aactgccgaa gccctggcag cagagcgtga
    12421 tcagcccctg cgcggcggta cgcatatgca cgggggcttt tttatcgaca tagatgtaag
    12481 cggtaacgta gtaaaaatcg taacttacgc cgtgaagcaa aataccgagg aacagtaacg
    12541 cgtaggtgaa atattcatcc gcactaccgt aaataaagaa gccatagcgg atcgcagcgg
    12601 tgaccagacc aagcaataat acctttttga taccaaagcg tttagtgaaa aacggtaatg
    12661 ccagcataaa gaatatttca gagaactggc cgagcgtcat ccagccggtg gcatttttca
    12721 tgccgacttc ggtcagataa ccgttggcaa agatgtaata gaacgccagt ggcatcgcaa
    12781 acaggaatga acagaagaaa aagacgagga agtttttatc gcgcagcagg atcagcgcat
    12841 ccaggccgag catgacttta atatccattt tgccggtgct ttttggtggc gtgtcgggca
    12901 ggaaaaacgc aaacacaccg agcagagcag aacttccggc ggtaatcagc agcgggatgt
    12961 tagtcggtga gatatcggca taccccagta tttgcggcaa gaaaccacat gccagaccgg
    13021 aggcaatcca gccgatagtg ctcatcacac gaatgcgcgg gaaatcacgc tccacatccg
    13081 gcacgttggc aaaagcgatg ctgttagtca gcgcaatggt cggcatatag gttagagagt
    13141 aagccagcag taacggaaag aacccggcaa aagtggtctg ttgcgcagcg aaatacatca
    13201 gcagcgcgcc tgcgaacatc aataccgcca gcactttttg cgccgagaaa aagcggtcag
    13261 tgatggagcc aaccagaatt ggcgacagga tcgccgcaat ggcggtacag gcatacgacc
    13321 agccaatttc tccggcacta aaaccgcttt tacttaacca caaccacaat ggcacaaacc
    13381 acgcgcccca gataaaccat tcaacaaaca tcatgaacga cagctttgct gttgttttca
    13441 tcttttaatt ccttcatgac aggtaatgta aggtacgcga tgacaatacc acttaataat
    13501 accttttaaa tatctttacg gtgaaaactt gaccgcgcta acattttttc tgatgaatcg
    13561 agccaacaga aaacgctgaa aaaacatcca aaagatggaa aaactcgccc gtaacgacca
    13621 ggattatgat tgcccgcaaa aggcgggcca ggacaatcca tagccgatat ccaatcggaa
    13681 tttacgggag catagtaatg acagatattg cgcagttgct tggcaaagac gccgacaacc
    13741 ttttacagca ccgttgtatg acaattcctt ctgaccagct ttatctcccc ggacatgact
    13801 acgtagaccg cgtaatgatt gacaataatc gcccgccagc ggtgttacgt aatatgcaga
    13861 cgttgtacaa caccgggcgt ctggctggca caggatatct ttctattctg ccggttgacc
    13921 agggcgttga gcactctgcc ggagcttcat ttgctgctaa cccgctctac tttgacccga
    13981 aaaacattgt tgaactggcg atcgaagcgg gctgtaactg tgtggtatca acttacggcg
    14041 tgttggcgtc ggtatcgcgg cgctatgcgc atcgcattcc atttctcgtc aaacttaatc
    14101 acaacgagac gctaagttac ccgaatacct acgatcaaac gctgtatgcc agcgtggagc
    14161 aggctttcaa catgggcgcg gtggcggttg gtgcgactat ctattttggc tcggaagagt
    14221 cacgtcgcca gattgaagaa atttctgcgg cttttgaacg tgcgcatgag ctgggcatgg
    14281 tgaccgtgct gtgggcctat ttgcgtaact ccgcctttaa gaaagatggc gttgattacc
    14341 atgtttccgc cgacctgacc ggtcaggcaa accatctggc ggcaaccatc ggcgcagata
    14401 tcgtcaaaca aaaaatggcg gaaaataacg gcggctataa agcgattaat tacggttata
    14461 ccgacgatcg cgtgtacagc aagttaacca gcgaaaaccc gattgatctg gtgcgttatc
    14521 agttagctaa ctgctatatg ggccgggctg ggttgataaa ctccggcggt gctgcaggcg
    14581 gtgaaactga cctcagtgat gcagtgcgta ctgcggttat caacaaacgc gctggcggaa
    14641 tggggctgat tcttggacgt aaggcgttca agaaatcgat ggctgacggc gtgaaactga
    14701 ttaacgccgt gcaggacgtt tatctcgata gcaaaattac tattgcctga tacgccttat
    14761 acgaacaaca ccaccccgta ggacggataa ggcgtttaca ctgcatccgg caacctatgc
    14821 ctgatgcgac gcggaagcgt cttatcatgc ctacatagca ctgccacgta tgtttacacc
    14881 gcatccggca taaaaacacg cgcactttgc tacggcttcc ctatcgggag gccgtttttt
    14941 tgcctttcac tcctcgaata attttcatat tgtcgttttt gtgatcgtta tctcgatatt
    15001 taaaaacaaa taatttcatt atattttgaa aacgaaaaca aacgacagga tatgaaaatg
    15061 cacgtggtat cgacaaagca gatgctgaac aacgcacagc gcggcggtta tgcggttccg
    15121 gcattcaata ttcacaatct cgaaacgatg caagtggtgg tggaaaccgc tgccaacctg
    15181 catgcgccgg tcatcatcgc cggaacgcct ggcacattta ctcatgctgg tacagaaaat
    15241 ctgttggcgc tggtcagcgc gatggcgaag caatatcacc atccactggc aattcatctc
    15301 gaccatcaca cgaaatttga cgatatcgct cagaaggttc gttctggcgt gcgctcagtc
    15361 atgattgacg cctcgcattt gccttttgcg caaaatattt cacgggtcaa agaggtggtg
    15421 gatttttgcc atcgctttga tgtcagcgtc gaagcggagc tggggcaact tggcggccag
    15481 gaagatgatg tgcaagtcaa tgaagccgat gctttttata ccaaccccgc tcaggcgcgt
    15541 gaatttgccg aggcaaccgg aattgattcc ctggcggtcg ccatcggcac ggctcatggg
    15601 atgtatgcca gcgcaccggc gcttgatttt tctagactgg agaacattcg ccagtgggtg
    15661 aacttaccgc tggtgctgca tggcgcgtca gggttatcga ctaaggatat tcagcaaacc
    15721 atcaaactgg ggatatgcaa aatcaacgtt gcaacggagc tgaaaaatgc cttctcgcag
    15781 gcgttaaaaa attacctgac cgagcaccct gaagcgaccg agccccggga ttatttgcag
    15841 tcggctaaat ccgcaatgcg cgatgtggtg agcaaagtga ttgccgattg tggctgcgag
    15901 ggcagggcat aacgcacctg ccatttaata aggaaaaaac atgaaaacgt taattgcccg
    15961 gcataaagct ggtgaacata tcggcatatg ttcagtctgt tctgcccatc cgttggttat
    16021 cgaagcggcg ctggcatttg atcgcaacag cacgcgcaaa gtgctgattg aagcaacgtc
    16081 aaaccaggtc aatcaatttg gcggttatac cggaatgaca ccggcagact ttcgcgaatt
    16141 tgtttttacg attgccgata aagttgggtt tgcacgcgaa cgcattattc tcggcggcga
    16201 tcatctgggg ccaaactgct ggcagcaaga aaatgcggat gcggcgatgg aaaaatccgt
    16261 cgagctggta aaggaatatg ttcgtgccgg cttcagtaaa attcatcttg atgcgtcaat
    16321 gtcctgcgcg ggggatccca taccgttagc accagaaacg gttgcggaac gagctgctgt
    16381 gctttgcttt gctgcggaaa gtgtggcgac agattgccag cgtgagcaac tgagctatgt
    16441 cattggcacc gaagttccgg ttccgggcgg tgaggccagc gccattcagt cagtacacat
    16501 cacccatgtt gaagatgccg ccaatacttt acgtacgcat caaaaggcct ttattgtccg
    16561 tgggctgaca gaggcgttaa cacgcgtgat tgccatcgtg gtgcagccgg gcgtggaatt
    16621 tgatcacagc aatattatcc attatcagcc gcaggaagcg cagccgctgg cgcaatggat
    16681 agaaaacacc cgaatggttt atgaagcaca ttctaccgat taccagaccc ggacggctta
    16741 ttgggaatta gtccgcgatc actttgcaat attgaaagtc ggtcccgcat taacctttgc
    16801 tttacgcgag gcgatatttg cactggcaca aattgagcag gaacttatcg cccctgaaaa
    16861 tcgcagcggt tgcctggcgg taattgaaga agtgatgctc gacgaaccgc aatactggaa
    16921 aaaatattat cgtacgggtt ttaacgattc attactggat attcgttaca gcctgtcgga
    16981 tcgtattcgt tattactggc cgcatagtcg gattaaaaat agcgtcgaaa cgatgatggt
    17041 gaatcttgaa ggcgtggaca tcccactggg catgattagt cagtatcttc ccaaacaatt
    17101 tgaacgcatt cagtccgggg aattatcagc aataccgcat tagctgatta tggataaaat
    17161 ttatgatgtt ttgcgcgcct atcgctacgg ctgtgcggaa taaggacggt atatgactaa
    17221 cctgtttgtt cgtagcggaa tttcttttgt cgatcgtagc gaagttttaa cccatatcgg
    17281 taatgagatg ctcgccaaag gtgtggttca tgatacctgg ccacaggcat taattgccag
    17341 agaagcagaa ttccctaccg ggataatgct tgagcagcac gccattgcaa taccgcattg
    17401 tgaggcgatt catgctaagt cgtcagccat ttatctgtta aggccaacaa ataaagttca
    17461 ttttcagcaa gcggatgatg ataacgacgt ggaggtatcg ttggttattg cgttgattgt
    17521 ggaaaatccg cagcagcaat tgaaactttt acgctgttta tttggcaagt tacaacagcc
    17581 cgatatcgtc gagacactaa tcactcttcc tgaaacccag ttaaaggaat acttcacaaa
    17641 gtatgtttta gattcagacg aataaatccc tctgtaacaa taaaaaggac tatttatgaa
    17701 acgcaagatt attgtcgctt gcggaggcgc ggttgcgacc tctacgatgg cggcggaaga
    17761 aattaaagaa ttgtgtcaga atcataatat tcctgttgaa ttaatccagt gtcgggttaa
    17821 tgaaatagaa acctatatgg atggcgtgca tttgatatgc actactgcca gggtggatcg
    17881 tagttttggc gatattccgt tagttcacgg catgcctttt gtttctggtg tcggtatcga
    17941 agcattacaa aataaaattc tgactatctt acaggggtga cctatgtttt cagaagtcat
    18001 gcgttatatt ctcgacctcg gccctacggt gatgctgccg attgtcatca ttattttttc
    18061 taaaatatta ggcatgaagg caggcgattg ctttaaagcg ggtcttcata tagggattgg
    18121 ctttgttggc attggccttg tgattggctt aatgctggat tccattggtc cggcggcgaa
    18181 agcgatggcg gaaaatttcg acctgaatct gcatgtggtc gatgtcggct ggccgggctc
    18241 ttcaccaatg acctgggcgt cgcaaattgc gctggtggcg attccgattg ctattctggt
    18301 taacgtggcg atgttactga cccgtatgac gcgggtggta aatgttgata tctggaatat
    18361 ctggcatatg actttcaccg gcgcgttgct gcatctggca accggttcat ggatgatagg
    18421 gatggcgggt gtggtaattc acgcggcgtt tgtttataag ctcggcgact ggtttgcccg
    18481 cgatacccga aatttctttg agctggaagg tattgctatt ccgcacggta cgtcggcgta
    18541 tatggggccg attgcggtgc tggtcgatgc tatcatcgag aaaatcccag gcgttaaccg
    18601 aattaaattt agcgccgatg atattcagcg caaatttggc ccttttggcg aacctgtcac
    18661 cgtgggtttt gtgatggggc tgattatcgg catcctcgcg ggttacgatg tcaaaggtgt
    18721 attgcagctg gcggtaaaaa cggcggcagt gatgctgcta atgccacggg tgattaaacc
    18781 catcatggat ggtttaacgc ccatcgctaa gcaggcccgt agtcgtttac aggcgaagtt
    18841 cggcggtcag gagttcctga ttggcctgga tcccgcatta ctgctggggc atacggcggt
    18901 ggtatcggta agcctgattt ttatcccgct caccatttta attgctgttt gtgttccggg
    18961 taatcaggta ctgccgtttg gcgatcttgc caccatcggc ttctttgtgg cgatggcagt
    19021 cgccgtgcat cgtggaaatc tgttccgcac cttaatctcg ggtgtcatca tcatgagcat
    19081 cactctgtgg atcgcgacgc aaactattgg tttgcacacc caactggcgg ctaatgctgg
    19141 ggcgttaaaa gccgggggta tggtggcttc aatggatcag ggcggttctc ccattacctg
    19201 gttactgatt caggttttct ccccgcaaaa tattcccggt ttcattatta tcggcgcaat
    19261 ttatctgacc ggtattttca ttacctggcg tagagcgcgt ggttttatta aacaagagaa
    19321 agccgttctc gcagaataat ttttaactga gggggagttt atccccctta acaatcagga
    19381 gtttttatga aatcagtggt gaatgatact gatggtatcg tgcgcgttgc agaaagcgtc
    19441 attcctgaaa ttaaacatca ggatgaggtg cgggtaaaaa ttgccagctc gggcttatgt
    19501 ggttccgatt tacccaggat atttaaaaat ggtgcacatt attatccaat aacgttaggc
    19561 catgaattta gcggctatat tgatgcggtg ggatccggtg ttgatgattt acaccctggc
    19621 gatgcggttg cctgtgtgcc gttattaccc tgttttactt gtccagagtg tctgaaaggg
    19681 ttttattccc agtgcgcaaa atatgatttt attggctcgc ggcgtgatgg tggatttgct
    19741 gaatatattg tcgttaagcg aaaaaatgtc tttgctctac ccacggatat gcctattgag
    19801 gatggggctt ttattgagcc gattaccgtt ggtctgcatg cttttcattt agcgcaaggt
    19861 tgtgagaata aaaacgttat tattattggt gccggaacca ttggcctgct ggctattcag
    19921 tgcgctgtcg cgctgggagc aaagagtgtg acggctatcg acattagctc agaaaaactg
    19981 gcactggcaa aatctttcgg ttcgatgcaa acatttaaca gtagcgaaat gagcgcgccg
    20041 caaatgcaga gcgttttacg cgaactgcgt tttaatcagc ttatcctcga gacggctggc
    20101 gtaccgcaaa ctgtcgaact ggcggtagag attgccggtc ctcatgccca actggcgctg
    20161 gtgggcacgt tgcatcagga tctgcattta acatcggcaa cgtttggcaa aatattgcgt
    20221 aaagagctga cggttatcgg cagttggatg aactattcca gcccttggcc ggggcaggag
    20281 tgggaaacgg cgagccggtt gctgacagaa cgtaagttaa gcctggagcc attaatcgct
    20341 caccgtggaa gctttgaaag cttcacccag gcggtgcgtg acatcgctcg taatgccatg
    20401 ccgggcaaag tgttgctcat tccatgaaac cgcgggccag cgtgatgctg gcccggtatt
    20461 gtgcaaaaca gatcattcac caatggtccc ccttcgttta cactagccac aattgaatat
    20521 gggtaaatga cgatgaattc attcgagcga aggaataaga tcatccaatt agtgaatgaa
    20581 cagggaaccg tgcttgttca ggatctggcg ggagtatttg ctgcctcgga agcgacaatc
    20641 cgtgccgatt tgcgctttct cgaacaaaaa ggcgtggtta cgcgctttca tggcggtgcg
    20701 gcgaaaataa tgtccggtaa tagtgaaacc gagacccagg aagtcgggtt taaagagcga
    20761 tttcagctcg ccagcgcgcc aaaaaacaga atagcgcagg cggcagtcaa aatgatccat
    20821 gaagggatga ccgttattct cgacagcgga agtaccacaa tgcttatcgc cgaaggatta
    20881 atgaccgcta aaaatatcac ggtgattacc aacagtctcc cggcagcgtt tgccctttcc
    20941 gaaaataaag acattactct ggtcgtctgc ggtggcacgg tccgccataa aacgcgatct
    21001 atgcatggat ctattgctga acgttccctg caggatatta atgccgattt aatgtttgtc
    21061 ggtgctgatg gtattgatgc ggttaatggt attacgacct ttaatgaggg ttattccgtt
    21121 agcggtgcga tggtcacagc cgctaataaa gtgattgccg ttctcgattc atcgaaattt
    21181 aaccgtcgcg gttttaatca ggtactgcca atcgaaaaaa ttaacattat tattaccgat
    21241 gatgctgtat cagaggtgga taaactggca ttgcagaaga cacgggtaaa attaattacg
    21301 gtgtagtatt gttctgtatg ccggataagg tatttacacc gcatccggca tttcggattc
    21361 tccctggttc aagagagaat agtttgatta acgcaataat ggacaatctg gtggtaatcg
    21421 acaacgcaac gccgccggaa gtatttcaat atgaaagttt tgtccgctca acggttcgcc
    21481 atcaagatta aaagtgattt cgtgtggggc ttgtatatca aaccacgacg aagcgccttc
    21541 gataatactc gggttatctt cgtcagattt taaggttgat acgagagccg gaagaatttc
    21601 atcgccggta aaaatgcgca gttgcagcaa gccatcgtta attaacgcgt tcggacacaa
    21661 ttgctgaccg ccaccggcct gacgcccgtt accaatacca ataccagggc gtcaccttgc
    21721 cagtgaaagt tttcaccgcg gatttcacaa cggtccggtt gcagagtatc catgcgcatt
    21781 aagccatgaa tgatgtaaga gacgccaccc agcgcggctt ttaatttttc cggcgtttct
    21841 gtggtaatac gcgtcccaaa tccgcctgtc gccatattaa taaaacaggt ttgtttgttg
    21901 acctgcgcca tatctatcgc aatggcgtta ccggcaattg ccagtttcag cgccttatcc
    21961 agtgcctcag gaatccctac actggtggca aaatcattgg cggttcctaa tggcaaaatt
    22021 cccagcgcgg gtatgccatc cccctcacac tgaatcaacg ccgtagaaac ttcattaatg
    22081 gtgccatcgc caccaccggc aattaccgtt gcgacgccca acttccgggc ctcctctaca
    22141 aatcgtgcgg catcaccttt ctcccaggtg acccgcacat ggatcgtcat tccttcctca
    22201 cgcaacagca taattgcttc gcgcaagggt agattgtcag tacttttgcc attaagaatc
    22261 agtaagctgg cgggaaattc tgccatgatc gtatgtgcct ttatgattgg tctgtagata
    22321 gtgtagagca gaaaagaaaa ggtggagtca gaacaggatg aaagtcggag gataaaaagt
    22381 cagttcaagt atggaggatt cagtggttac caccaggagc ttgcaatggg aacagcgaat
    22441 attaacggta gccaccgata aatttcaaaa aagagcatat gcctaatatt caaccaaaca
    22501 gtggcatctt aaatatacta ttccaaatat attaaagccc catggagtta cctggaaagg
    22561 gccttcatgt ctgtaagtcc tacttatgta ggaaatgttg tacagaacat ttattataat
    22621 cctattcaaa tataatgatc agctattatt atatttaaac actagagagt gtcgttggta
    22681 tttaatgggg aaaggtgaga tgaaaaagat agctgctata tcattaatta gtatttttta
    22741 ttatgtctgg ttgtgctgtg cataatgatg agacaagtat cggtaaattt ggtcttgcat
    22801 ataaaagtaa tattcagcgt aaactcgata accaatacta caccgaagcc gaagcttctt
    22861 tagccaggag tagaatatct ggtgcagaaa atatagtaaa aaatgatgca actcatttct
    22921 gtgttactca gggcaaaaaa atgcaaatag ttgagctgaa gacagaaggt gtaggattac
    22981 atggtgtcgc tcgtctgaca ttcaaatgtg gagagtgaga atattttttg gtaagcatca
    23041 aacatgcgcg ttctggttgt gcttagccgg aacctgtgcg agcacgatgc cgttacgtga
    23101 aaggcatcgt gctatgaagg gagattctat cgatgtggtc aatggaagac ggtgaccagg
    23161 gatagggctt atgcataaaa aataagcccg tgtaagggag attacacagg ctaaggaggt
    23221 ggttcctggt acagctagca ttttatgggt tatgtttttc agcgaaacgg atgataacct
    23281 taataaatgc agctgtatgt gatcggtttc taagaatttt ccatccggga aaaataatcg
    23341 aaattaatca cttaccgtgt gggttacgcg tggtttcccc ggagaaatta cgcatcagca
    23401 gcgcgtaatt tagttcaaga tcctgcggga ccgggagcca cacagtataa ccatcgcctg
    23461 gtgcgaccgg catcgctaca cctttggcgt tttccatgtg ctcaagggta aagttaatgt
    23521 tgccttgcgg cgtcatcagc tcaaggctgt cgccaacgga gaatttattt ttcaccgcta
    23581 ccgctgcgag gtcccccttg cgctcaccgg taaactcacc aacaaactgc tggcggtcag
    23641 aaactgaata accgtattcg tagttctgat aatcgtcgtg agtatgacga cgcaggaaac
    23701 cttcggtata gccacgatgc gccagacctt ccagagtttc cagcaggctg gtatcgaacg
    23761 gtttgcccgc agcggcatca tcgatagctt tacgataaac ctgtgcggtg cgtgcgcaat
    23821 agtagaaaga tttagtacgg ccttcgattt tcagcgaatg cacgcccatt ttggtcaggc
    23881 gttctacatg ggcgatggcg cgcagatctt tcgagttcat gatgtaagtg ccgtgctcat
    23941 cttcaaacgc ggtcatatac tcgcccggac gctgggcttc ttcgatcata aacactttgt
    24001 cggttggcgc gccgatacct agcgtcggct caacattttg caccgggatc ggctcgtact
    24061 tgtgtacgat gttgccaacg tcatcttctt tcccttcctg gacgttgtac tcccagcggc
    24121 aggcgttggt gcaggtaccc tggttcggat cgcgcttgtt gatatagcca gagagcaggc
    24181 agcgaccgga gtaggccatg cacagcgcac cgtgaacgaa gatctcgatc tccatatccg
    24241 gcacctgatt gcggatctct tcaatctctt ccagcgacag ttcgcgagag aggatcacgc
    24301 gggtcaggcc catttgctgc cagaatttca ccgtcgccca gtttacggcg ttagcctgca
    24361 ccgagaggtg gatcggcatt tcagggaagt actcacgcac cagcataatc agccctggat
    24421 cggacataat cagcgcatcc ggccccattt ccaccaccgg tttcaggtca cggataaagg
    24481 ttttcagctt ggcgttgtgc ggtgcaatgt tgaccacgac ataaaacttt ttccccagcg
    24541 cgtgggcttc attgatgccg agctgaagat tttcgtggtt gaattcgttg ttgcgcacac
    24601 gcagggagta acgcggctgg cccgcataaa cagcatctgc gccataagcg aaagcgtaac
    24661 gcatattttt cagcgttccc gccggggaaa ggagttccgg tttaaacata attctctcgt
    24721 tctgatgaca ggtcagatcc gcttcacctg atgaagcggt taggggagtg cccccacttt
    24781 aagggcgggc attgtagcgc aatcggcggg gttggctcca gtgcaaatgt gagggaaaag
    24841 actgggggat ttatttgtta ccggccttca ctttatgtaa aaacagatcc ttttcccacg
    24901 gttgggcttc gccactgcgt agtccctcgg caagtttttc tcgtagcaag cgtaaagctt
    24961 cacgtattgt ttcgttttgg ttccgctcgt cagcaggtac atttgtcatc gtaagtctat
    25021 aattcgaagt tatttaaaag gaatgtaacc ccataatctg ttgtgaagtt ccggattgcg
    25081 ggtaaaaagc gcctgaagtt gctgacgctg aagagcattc ggttgaatgc ccgaaagatt
    25141 gaaattgcgt tgccatatcg cgagctgttt acctgcaaat tcttcagtta gcttgtgttg
    25201 cgattgaaga agaagaatta aaccgtccca tttgttcaag ttatgataca gccgacaata
    25261 tgcgcaagca tgtttaactg acggcgcgtt ttcctgcaac tgacgtattt cctcgaacgt
    25321 gagcggaacg cgacaccata cacagatgtt aaccataaat cgcaacccgg cggcgtccgg
    25381 gttagccagc gtggtcagaa tagtctcttt gacgccacaa cgaggattag cttttgcaag
    25441 aatgtgcata gcggctaaac gcagtgggaa tacattctgt gataatcccc attctgccag
    25501 ttttaaaata ttgggatcat gaatggaatc cagcccgtat aaagcggccc gtcgctgtga
    25561 gggagtatat tccgcagaag tgacaacatg acgccagaat tgcggaacat ccatgacttc
    25621 gtgaagcata tttttagcgc gtaggcggat caacatattg ttatccagca gtaatgtgct
    25681 gtgcaacgcc ggaggcattt ctattgctcg gtcagtgagg ctaaataacg ttgcttgtcg
    25741 aatacgcggc cagcggtctt ttaacagacg agttaatacc gcttcgctta atggtaattg
    25801 ttgacgcagc cagtgggtgg tcgccagcat tcgcaaaccc tcatcgggtt tatcgagtat
    25861 tgaaagcagt gaagattcat cattaaagta accgtattca atcagcgttt gtaataccgc
    25921 gcgggagagc tttttatcag ggcaagtaag ccaatacgtt aattgtgggc ggttattttc
    25981 tgtcaataaa tatctaagta tctcgtctac aaatgcacgg tgatcgtaac gctggcattg
    26041 gagaaggtta cgtatcatgg gtagattaac ggcaaatgcc gctgcattct tatccttcat
    26101 taaatgacgt aatgctatgg ttgcagcaag gcgaacctct tttacccagt cattagctgc
    26161 aagtaataat tcttctatag ccgcaacatc ctctttgtgc cccagatact gcacggcctt
    26221 ttctcgtata tatccattgt gatgatgggt aagctggcaa agaaccagag tatcgttgag
    26281 atcacaatca tgtgctaaat aattgcctgg ttcggctatc aatgcctgga gttgttgctg
    26341 gatgagaagt aattcacagt caacagaatt attcatttcg acgttaaaca aaaccctgcg
    26401 tgaaaataat gtacgcaatc ctttgagcat aattttcctt atcagttatg aggagaaaac
    26461 tcatttcatg gttaataatt tcttgaggga tagtaactct gtgatgagag aaaataaagc
    26521 cggacgccaa caacccacgc ccggcatcgt aattacgtat tgtctttcac cgtctggctt
    26581 gtgccattgg ctttaacgga ggcaattccg gtttcacgag attgcgcggt ggcgtacatc
    26641 tggctggagc cgataatttg atgattggcg gctttcagat tgaaatagaa tttgccgtta
    26701 cttgccgttt ttttctcata gcgttcttct tgcgggctgt tgctacgcac tgacgcgatg
    26761 cccttttccg cagaggcttt tgatgtatac agctcgctgg tgaggatagt ctcaccattg
    26821 cccgctttta gcacaaaccg gaactgatta tcactgctct tactgagttc aaaccaacca
    26881 gccataatga ctccttgatt gaaattgcgt atcgaaaaca gcatctaaag gtgctgttta
    26941 ccgattaaag tatgagcgat tttctgatgc ctgccagggc ggagagataa tgtcagtttg
    27001 ttgaccatgc gtgggataat gttgccggat ctggtctgaa cgccatctcc ggctaacaaa
    27061 gtcatgtcgc taaaactaaa cgatgcggca ggcgtcggct tcccagcggt aaccaacgcc
    27121 gtaaacggcg cggataaatg actgttcggc gtcgagagat tccagcttgc ggcgcaggtt
    27181 tttaatgtgg ctgtcaatgg tgcggtcggt tactacgcgg tagtcgtcat aaagatgatt
    27241 gagcaattgc tcgcgggaga acacttttcc tggttcatga gagagcgttt tcaacagacg
    27301 aaattccgca ggtgtcaggt caagcatttt accgcgccat gaagcctgaa aacgaccttc
    27361 gtcgataatc aacgggcttt cggcatcctg ttgctgcaat tcgcgctgcg gtttgcaacg
    27421 gcgcaaaatg gttttgacgc gcgctaccac ttcccgtggg ctgtacggct tgcagatgta
    27481 gtcatctgcg ccaatctcca gtccgagcag gcggtcgatc tcttcgattt ttgccgtcac
    27541 catcacgata ggaatgtcag aaaaacgacg aatttcccgg cacagcgtca agccatcggt
    27601 gccagggagc atcagatcca acaggatcag atccggtggt gtctggcgca catacggcag
    27661 tacctgatcg ccgtggctga taagcgtcgg cgcatagctc gcagcacgca gataatcaat
    27721 gagcaactgc cccagcttcg gttcatcttc cacgatcaaa atacgtggtg tgttttcgtc
    27781 gattggtaac tcggtcatac ttctctctgt aaatcccgtt ccagcggtaa ctctactgta
    27841 atgcttaccc cgccaaaagg cgaatgggca gcaataatgc ggccattatg tgcttcaaca
    27901 atgttcaggc aaatcgccag ccccagcccg gaaccaccgc tggcgcggtt gcgggaacct
    27961 tcggtgcgat aaaaacgttc aaataatttt tgtagctgct cgtcactgac acctggcgca
    28021 ctgtcggcaa aggtcaggcg caccgttttg tcgtgctgct cggcagagat tttcaggctg
    28081 ccgccgctgt cagtatagcg caggctgttt tcaagtaaat tattgaataa ctgcattaaa
    28141 cggtcgcgat cgccaaatac ggtaatactg tctggcaggg aaaattgcag tttcaggcca
    28201 cgactggcga atcgttcgcg aaatgcgccg cccgccactt ccagcagtgg gatcaaatct
    28261 accggtgctt tttgataggc gagagcgcct tcatcagaca tcgacaactg atggagatcg
    28321 tcaaccagtt tggtcagtgt accgacctcc gcctgtaaag acgccaccgt ctccggcgtg
    28381 aatttacgca cgccatcctg aatggcttcc agttcaccgc gcagcaccgc taatggcgta
    28441 cgcagttcgt gagaaatatc ggccataaaa tcgcgccgca tttgctggtt tttctccagt
    28501 gtgctggcaa gctggttgaa gtcttgcgcc agtttgccca gttcatcttc actggtgggc
    28561 gttacgcggg tagtgaaatc gcccgccgcc agtttgtgcg tgccatcgac aagtcgtttt
    28621 accggtgcca gtaaaccgcg cgccagcaga aaagtggcaa gtgccgcgag taacgttgcc
    28681 agggcgacaa tcaaccagct ggtttgccgc tgttgtttat cgaaattgat atcagtattg
    28741 cgcgttaacc gctcaacggg ggaggcgatc accgcgccaa cttccgcacc gttgaccaga
    28801 atgggtcgcc gtgtaccgtc aggtggaatc ggcgctcgcg gaccaaccag cactttgttg
    28861 ttttgatcaa ccacccagaa ctgggtacgc cagccgtgcg gtggcatacc cgggccgggt
    28921 ttatcttccg aattatcgtg ttcaaatgaa cgcaggatct gaaagacaaa gcgatcattg
    28981 ttgcgcagga agcgccagtt gccatgctgc gcatactgct cgccaagcgc atcacttaac
    29041 agttgtaatc gctgttcatt accatgcttg atgtaatcaa taaagccacg ctcaaaactg
    29101 atacgcaccg cccagtgcat actgatcagc aagacaatgc aggtggcgaa aatcgccaga
    29161 aacagtttgc cggtaatacc gggtcgccag aacttcattg cgcgctcctt tttcgccgcg
    29221 aaatagctac attttgatgc gtatcgttcg gcactctggc aaagatgaac gccggaaggg
    29281 cgatgatcaa cgccatgcta agccaggtgt acataaagac ggtttgtgtg gtgccgctgt
    29341 cgacgctgac atgctgtgaa ccaaaaagtc ccagcaacag cccggcgata gtgacgccga
    29401 tactcatcga caattgcata atcatcgaca gcaggctgtt gccgctgctc gccagattgt
    29461 ccgggagatc tttcagcgtc agggtgttca tggaggagaa acgcgtcgag ttgaccatcc
    29521 cttgtaaaaa caggacgaac ggcaaaacgt agtaccagcc cagcagggcg gtagtcataa
    29581 acaacagggt gaccagcgac agacccagcg tggtcgctac cagtacccga cgataaccaa
    29641 agcgattcac cacctgtacc acaattcgct tcattcccat gctgccaagc accatcggga
    29701 tcatcatcag tccggcatga aacggcgaga aaccgaggcc aatttgcagg aaaaccggtg
    29761 tcataaaggg caacatgcca ctgccaatac gtccggcaaa gctccccgcc aggcccagcg
    29821 aaaaggtacg agtacggaac agtttcagac tgaacagggc acggttgtta tttctggcgt
    29881 gcagcagata aagcaccagt gccaccacgc caactgcgac caggccagca atcgccagcg
    29941 gcgataaacc tgtaccttta ctgccgtcca gcgccagggg ttaataccgc catgccaacc
    30001 gccagcaata aaaatccgga gagatcaaag cgccacgtct gcatggtgta gttcggcatt
    30061 aacagcaatg tggcgatcgc accgataatc cccaccggaa tgttgatcaa aaagatccag
    30121 tgccacgacg cgtactccac cagcagaccg ccgagcgccg gaccgagcag cggaccgacc
    30181 tgaccgggta acgtgacaaa ggtcatcgca gccatatatt gctcgcgcgg tacgattttc
    30241 atcaccgtca atctgccgac cggcaccatc atcgcgccgc caacgccctg taacgcgcgt
    30301 gccagcaaca gttcgttcag cgtgccggaa agcgcgcaaa acagtgaacc gagagtaaac
    30361 agcacgatgg cggtaaagaa aatattgcgc acgccgactt tgtccgccag ccagccgctg
    30421 gcgggcagca tcaccgccac ggtcagcaca taagagacaa tgaccatgtg catatgcaac
    30481 ggactttccc cgaggctttg cgccattgag ggaagggcgg tgtttacgat ggtggtgtcc
    30541 agcgactgca taaagaagcc gaaagccaca atccacaatt gccaacgggt gctgtcggga
    30601 agatctgtca tttactcggt taccgtttgt ttaggtttac gcgaaaaacg cagccgcaga
    30661 cggtcgaaaa agagatacac caccggcgtg gtatacagcg taaggagctg gctcattacc
    30721 agtccgccga caatggtgat ccccaggggt tgccgcagct ccgagccgtc gccgcccgac
    30781 aataccagcg gcagcgcacc aaacagcgcc gccagggtgg tcatcataat cgggcgaaaa
    30841 cgcagcagac aggcctggaa aatagcttcc tgcggcgtca ggttaccgtg ccgttgggct
    30901 tcaagcgcaa aatcgaccat cataatggcg tttttcttca cgatgccgat taatagcatg
    30961 atccctatca gggcgattag gctgaacggg gcattgaaca gctccagcgc caacagcgct
    31021 ccaacgcccg ccgagggcag ggtggagaga atcgtcagcg gatgtacgta actctcgtaa
    31081 aggataccca gcacgatata caccgtggcg atggcggcga taatcaggat cacctgcgag
    31141 ttcatcgtct cctggaacac ctgcgccgtg ccggcaaaac tgccgcgcac cgtcgaaggc
    31201 accccaagct gggtcattgc gcgatcgatc gccgcactgg cgtccgagag cgattttccg
    31261 gtcggcaggt taaacgaaat ggtcgaggcc gccgataatc cctgatgatt caccgatagt
    31321 ggggcattcg ccggttgcca tttagcgaaa tacgacagcg ggatcgcttt gccttcgtta
    31381 ttgataacga acattttttc cagcgcactg atgtcctggg tatagcgcgg ctccacttcc
    31441 atcaccactt tatactggtt catcggctgg taaatggtcg agatttgccg ctgaccgaag
    31501 gcgttattta acagactgtt ggcggcttgt acgtcgattc ccagccgtgc catggtgtcg
    31561 cggtcgtaaa ccagattcat ctccgcgccg ttatcctgct gatcggagtt cacgtccgcc
    31621 agttccggca acgtcgccag ttttttgcgg attttcggct cccattctcg cagtgccgcc
    31681 aggtcgtcgg ataacaacgt gtactggtag ctggcgttcg actgacgccc accaacgcga
    31741 atatcctgta ccgccatcag gaacagattc gcccccggtt ctttcgccag ttttacgcgc
    31801 agacggtcga taatttgctg cgccgtttcg ctgcgttcgt cgcgtggctt gagggtgata
    31861 aacatcatcc cgctgttcac tcgcgaaccg cctgtaaagc cggtgacatt atccactgcc
    31921 ggatcgtcac ggataatttt catgaaatcc tgcaacttac cgcgcatcgc ctgaaacgaa
    31981 atactctgat ccgcctgaat cccgcccatc aacacgccag tgtcctgctc cgggaagaag
    32041 gttttcggga tcgagatata cagccagata ttcagcgcaa tggtgccaag cagcaccacg
    32101 cccaccagac gggtatgatt gagcacccat ttcagtgact tgccgtagcc ttgttgcagg
    32161 gctaccaaca tgcgaccaaa accacgcagt cgcttttgct cgcgcggctt gctggctttc
    32221 agcatccagc cacacatcat tggcgttaat gtcagagaaa ccagcaacga tataccaatg
    32281 gcgacagaaa gcgtcacggc aaattcgcgt aacagtcggc ccggcaatcc gcccatcaac
    32341 agcagcggca ggaacaccgc caccagtgac agactcatcg acagcaccgt aaaaccgact
    32401 tcgcgagtac cttgcagtgc ggcttgcaac ggtttcattc ccgcttccag atgacgggca
    32461 atgttttcca gcaccacgat ggcgtcatcc accacgaaac cagtagcgat ggtgagcgcc
    32521 attaacgaaa gattattgag actgaaaccg cacaggtaca tcgccgcaaa cgtaccaatc
    32581 agcgaaaccg gcaccgcaac ggcgggaata atagttgcgc gacccgagcg caggaataaa
    32641 aacaccacca gaatcaccag cgccaccgag ataatcagcg tttgctcgac ttcttccagc
    32701 gaggcgcgaa tggtggggga gcgatcctga gcaatttgca gatcaatcgc cgccggaatg
    32761 gtttcctgca actccggtaa ttttgcccgg atgctgtcaa ccgtctggat aatattggct
    32821 tccggcagct tgcggatcat cagcaaaata gccggtttgg cattggtcat cccggcgtta
    32881 cgtacatcct gtacagagtc ggtcactgtc gccacatcgc ccagacgaac cgcgccgccg
    32941 ttgttgtaat gaataatcag cggctgatat tcggcggcgg tttttagctc atcattggtc
    33001 tggatctgcc agcggtgagt gccatcttcc agcgccccct gcggtttacg cacgttggca
    33061 ttgctgatgg cagtgcgtac gtcgtccagc gagacgccct gattaaacag cgcctgcgga
    33121 ttcagcccga cgcgtacggc gggcagtgag ctgccgccga catcgacatc accaacaccg
    33181 tcgatttgcg aaatcgtcgg agccagctgc gtcgaggcga aatcgtacag tttaccctgc
    33241 gaataagtat cggatgtcag cgtgaggatc ataattggcg catccgacgg gttagctttg
    33301 cgataggtcg gacggctggg catcccgctg ggcagcaaac tttgtgcagc gttgatcgcc
    33361 gcctgcacat cgcgcgccgc gccgttgata tcccggtcaa aatcaaactg caaaataata
    33421 cgcgtgctgc cgagcgaact gctggaggtc atttcactga ctccggcaat gcgcccaagt
    33481 gagcgctcca gcggcgtggc aacggaagac gccattgttt ctggtgacgc accgggcagc
    33541 gaggcgctga ccataatcac cggaaaatcg acctgcggca gcggggcgac cggcagcata
    33601 cggaagccca gtatgccgca cagggtaatg gcaaccgaca gtaaaatcgt cgccaccgga
    33661 cggtaaatga agagggcaaa aaacttcact tacgcttcct cttcatggcg agcaaagcga
    33721 cttttggtcc acaatgccag gcggtcgaac agcagataaa tcaccggcgt ggtgaacagc
    33781 gtcagcacct ggctgacaat cagaccgccg accatgccga tacctaacgg acgacgcagt
    33841 tccgcgccga ccccggtact caacatcagc ggcagcgcgc caagcagagc cgccagggtg
    33901 gtcatcagga tcggacgaaa acgcaacaga caagcctggt agattgcatc gcgcggcgac
    33961 atgccttgct cgcgctcagc agccagcgcg aagtcgatca tcatgatggc gttcttcttc
    34021 acaataccga tcagcaaaat aatgccgata atcgcaatca catccagttc gctaccggca
    34081 atcattaatg ccagcagcgc gccgacccct gcggtgggta gcgtcgagag aatggtgatc
    34141 gggtgaataa agctctcgta cagaatgccg agcacgatat acatcgccac caccgccgcg
    34201 acaatcagcc agacagtgct gcccagcgcc gactggaagg cgagggtgct gccctggaat
    34261 tgcgtggtga tatccaccgg cagattcagc gtcttttcgg tgtccataat cgcctgcacc
    34321 gcatcgccca gcgaatagtt atccggcacg ttaaaggaga tggtcgttac cgggaactga
    34381 tccagatggt tgatggaaag cggcgcaaaa cgctgttcaa ctttggcaat tgagcttaac
    34441 ggcaccacgc cgccgtcgct actggtcagg cgaatggtat ccagcgccgc gaggcccggg
    34501 gtaatttcgg tgttgtgctc cagcactacg cgatactggt tagcctgagt ataaatagtg
    34561 gaaatcagtc gctgaccaaa cgcactgtac agggcattat cgacatccgc catgctgatc
    34621 cccagacggc tggcgctgtc gcgatcaaca ttgacatacg ccaccagccc tttgtcctgc
    34681 cagtcgctgg agacatcaga aagctgtggc agttgctgga gtttttccat caactgtggc
    34741 acccaggtac tgagcgcatc cagtgaggtg gcctgcaagg taaactggta ctgggtgcgg
    34801 ctgacctgag tatcaatagt cagatcctgc gttggttgca gaaagagatc gacgcccggc
    34861 actttatcta ccgccgtttg cagacgggcg atgacttttt gcacccgatc atcacgttca
    34921 tccaacggtt tgaggttgat ttgtaaacgt gcactattca gcgacgggtt agtgccatca
    34981 acgccaacaa atgaggtcag gctttgcact gccggatcct gcaaaatcac gtccgcgacc
    35041 tggcgttgtc gctgggccat attggcaaag gagctggatt gcggtgcctg caaagtgccc
    35101 tgaataatgc cattgtcctg taccgggaag aaacctttcg gaatgaacac ccacagcagc
    35161 acgctaagca gcagcgtgct gagtgccacg cttaaggtca gccacggatg attcagcact
    35221 ttcgccagtc cacgaccata ggcggcgatt atcctgtcga acattttttc cgaggcacgg
    35281 gagaagcggt tctgtttacg caacgactcc tggctgagca tccgcgcgca catcatcggt
    35341 gtcagggtca gcgacaccac cgctgagatc aaaatcgcta ccgccagggt aatagcaaat
    35401 tcgcggaaca gtcgcccgac gatatcgccc ataaacagca gtgggatcaa caccgcaatc
    35461 agtgagaaga tcagcgagat aatggtaaag ccgatttcac ctgcgccctt gagcgccgcc
    35521 gccaacggtt tttcgccttt ttcgatatag cgggaaatgt tttcgatcac cacgatggcg
    35581 tcatcgacca cgaatccggt ggcgatagtt aacgccatca gtgtcaggtt attgattgaa
    35641 aaatcgagaa acaccataac cgcgaaagtg ccgattaacg acagcggtac agcaacaccg
    35701 ggaatgatgg tcgccggaat attgcgcaaa aacaggtaga taatcatgac taccagcgcg
    35761 atagccatca tcaattcaaa ctgagtatca tcgacggatg cgcggatatt ggtggtgcga
    35821 tcggaaagca ctgtcacctt caccgatttc ggcagactct cagtgagctg tggcagcatc
    35881 tgccgaatgc tgtcggcggt ggagataatg ttagcaccgg gctggcgctg aacattcatc
    35941 acaatggcct gttctttgtt cgcccacgcg ccgagccagc tgttttctgc accttgctct
    36001 acagttgcga catcgcccag acgaattggc gcgccgttct ggtaggcgat gattagctgg
    36061 cgatactctt cggcggattg catctggtcg ttcgcggaaa gcgtgaccgc acgggaaggg
    36121 ccgtcgaggc taccttttgc cgagttaacg ttagcgccgg taatggcggt gcgcacggtt
    36181 tcgctggtca ggccgagggc ggcaatcgcc tgagcgttaa gtttgacgcg aacagccgga
    36241 cgctgaccgc cggaaagcgt caccaggccg acgccggaaa tctgcgagat tttctgcgcg
    36301 acgcgggttt ccaccatatc ttccacttgc gtcatcggca tggcggttga ggtgacggcg
    36361 agcgtcatga tcggcggatc tgccgggttc actttgctgt aaaccggcgg gttaggcaga
    36421 tcgctcggca acaagttggt cgcagcgtta atcgcggcct gcacttcctg ctcggcgaca
    36481 tcgagcggta atgttagctg gaactgcaaa gtgataactg acgcaccgcc ggaactttgc
    36541 gacgacatct gtttcaggcc agacatctgc ccgaactggc gttcgagcgg cgcggtaacg
    36601 gcagaggtca tgacatccgg gctggcacct gggtagagcg tgaccacctg aatggtcgga
    36661 tagtccactt ccggcagcgc cgaaacgggc agggcgcgat aaccgataat cccggcgagt
    36721 aagatcgcca ccatcagcag cgtggtggcg acaggacgca taataaacag gcgcgacggg
    36781 ccgcctgtgc tgctcggggg taacacctgc atcaggagcg tgctcctttt ttcgcgtatt
    36841 cgcggctggt ggctttctct tccggagtgg tggcgctctg ggcttccacc acttccactt
    36901 tcgccccttc ggtcaggcga tcaatgccgt ctgtcaccac gcgatcgccc gcagaaatac
    36961 ctgcacggat caccactttc tgactgtcct gaatgcccgg cgtcaccaga tgtttgctga
    37021 ccttgttttc gctattcagc acccagacaa aatggccttc attgcccatt tgcagggcgg
    37081 ctgttgggat cactacggcg ttttgttcgg tgtcgactaa catgcgcgcg ttaacaaact
    37141 gattgggaaa cagcacatca ttctgattat taaagcgtgc tttcacttta atcataccgg
    37201 ttgtggcatc gatttggtta tcgaggctta acagcgtgcc ttcacttaat ttcttcgaat
    37261 tggtgcgatc ccaggcttct accaccagcg gttttccggc tttttgcgcc tgcactacag
    37321 tagcgatatc gctttccggc agggtaaaga ctaaatcgat aggatgcgtc tgggtgatca
    37381 ccacaattcc ggtggtatca ccactggaga tttggttacc aacatcaacc tgcttgagac
    37441 caacgcgacc atcgactggt gcggtgatgc ggctccagtc gagttgcaac tgcgcgctgg
    37501 cgacgcttgc ttcatcagcc ttaatggtgc cttcggtttc actgaccagc gcctgttggg
    37561 catccagctc ctgacgggag acgagattgg tttttgccag ttgctgataa cgcgccagat
    37621 cacggcgggc gttagcaagc gtggctttat cttttgccag ttggccctgg gtttgtgcta
    37681 atgcaacttt gaactggctg gggtcaattt ctgccagtaa atcgcctgct ttgacctgct
    37741 ggccttcctg gaaatgtaac gccatcagtt gaccgtccac gcggctgcgc accgtaacag
    37801 tattagcggc gataatggtg ccaagcccgg tgaggtaacg cggaactgcc tgttctacgg
    37861 cggtcgccgc ctgaaccggg gctaatgggc cggaacgcat accacggcga ccacccgctg
    37921 gcgattgctg cgcttgtttc gtcgcccctg gggctgcact ccgggagtca ttgcggcctt
    37981 gccagaacca gaatgcggcg atggcggcga taaccaccac gattacgatt acccaacggg
    38041 atttataact gcctttcatc gttaagagtt tctcttcctg aaacgtttcg cggaatgata
    38101 ctagtgtagc cagccaataa gggagaaaaa tggaggaatt atgaaacact gtcgggaatt
    38161 gtctgaatga cgggcacatt tgcgagcacg catccagtaa taacacagga aactatttta
    38221 tctacgcgtt agggatagac tgcttgcatg gcgaaaggag gtaagccgcc gatttcagcg
    38281 ggacgctgaa acgggaaagc ccctcccgag gaaggggcca taaataagga aagggtcatg
    38341 atgaagctac tcatcatcgt ggtgctctta gtcattagct ggccagctta ctaagactac
    38401 cagggcgggg gaaaccccgc tctaccctca ctcctgaaag tatgccttca cgataagatt
    38461 gtcaatctgc aggctttgca gtctgcgatc ctgccagcaa atattctttg cgagacgtta
    38521 cgcaataatc acactggaaa ctattttatc cgcaagtcag cgatagactg catacagggc
    38581 gaaaggaggt aagccgacga tttcagcggg acgctgaaac gggaaagccc ctcccgagga
    38641 aggggcctta aataaggaaa gggtcatgat gaagctactc atcatcgtgg tgctcttagt
    38701 cataagcttc cc
//
LOCUS       DADMJE010000017        37820 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.017, whole genome shotgun sequence.
ACCESSION   DADMJE010000017 DADMJE010000000
VERSION     DADMJE010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37820)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37820)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37820
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.017"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..380
                     /locus_tag="JN001_000810"
     CDS             <1..380
                     /locus_tag="JN001_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9052127.1"
                     /translation="ICSNKHPRITDNSTYEQIMAEEFTQLISKSAGVDDIQMEIDEKF
                     MNRKISFRGSSLLTIINSIAVTDLLGIVPYELYNSHRDFLNLKEIKLEHPLPSIKLYI
                     SYNKSSLNNLVFSRFIDRLNESF"
     gene            527..2044
                     /locus_tag="JN001_000811"
     CDS             527..2044
                     /locus_tag="JN001_000811"
                     /inference="COORDINATES: protein motif:HMM:NF014273.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HAY9052128.1"
                     /translation="MSIYKIPLPLNILEAARERITWTLNTLPRVCVSFSGGKDSGLML
                     HLTAELARQMGKKICVLFIDWEAQFSCTINYVQSLRELYTDVIEEFYWVALPLTTQNS
                     LSQYQPEWQCWEPDVEWVRQPPQDAITDPDFFCFYQPGMTFEQFVREFAEWFSQKRPA
                     AMMIGIRADESYNRFVAIASLNKQRFADDKPWTTAAPGGHSWYIYPIYDWKVADIWTW
                     YANHQSLCNPLYNLMYQAGVPLRHMRICEPFGPEQRQGLWLYHVIEPDRWAAMCARVS
                     GVKSGGIYAGHDNHFYGHRKILKPEHLDWQEYALLLLNSMPEDDRIKAINEIRMAIHQ
                     VSPFREEPVDCVLWVKNSQLMPNDYNPNNVAPPEKKLLQKSIEIDGFTQPIVVTHTDK
                     NAMEIVDGFHRHEIGKGSSSLKLRLKGYLPVTCLEGTRNQRIAATIRHNRARGRHQIT
                     AMSEIVRELSQLGWDDNKIGKELGMDSDEVLRLKQINGLQELFADRQYSRAWTVK"
     gene            complement(2045..3194)
                     /gene="ybdL"
                     /locus_tag="JN001_000812"
                     /pseudo
     CDS             complement(2045..3194)
                     /gene="ybdL"
                     /locus_tag="JN001_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308666.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine-oxo-acid transaminase"
     gene            3303..4391
                     /gene="hcxA"
                     /locus_tag="JN001_000813"
     CDS             3303..4391
                     /gene="hcxA"
                     /locus_tag="JN001_000813"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxycarboxylate dehydrogenase HcxA"
                     /protein_id="HAY9052129.1"
                     /translation="MPHNPIRVVVGPANYFSHPRSFNHLNDFFTDEQLSRAVWIYGKR
                     AIAAAQTKLPPAFGLPGAKHILFRGHCSESDVQQLAAESGDDRSVVIGVGGGALLDTA
                     KALARRLGLPFVAVPTIAATCAAWTPLSVWYNDAGQALHYEIFDDANFMVLVEPEIIL
                     NAPQQYLLAGIGDTLAKWYEAVVLAPQPETLPLTVRLGINNAQAIRDVLLNSSEQALA
                     DQQNQQLTQSFCDVVDAIIAGGGMVGGLGDRFTRVAAAHAVHNGLTVLPQTEKFLHGT
                     KVAYGILVQSALLGQDDVLAQLTGAYQRFHLPTTLAELEVDINNQAEIDKVIAHTLRP
                     VESIHYLPVTLTPDTLRAAFEKVESFKA"
     gene            complement(4401..4598)
                     /locus_tag="JN001_000814"
     CDS             complement(4401..4598)
                     /locus_tag="JN001_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY9052130.1"
                     /translation="MFDSLAKAGKYLGQAAKLMIGMPDYDNYVEHMRVNHPDQTPMTY
                     EEFFRERQDARYGGKGGARCC"
     gene            complement(4780..6885)
                     /gene="cstA"
                     /locus_tag="JN001_000815"
     CDS             complement(4780..6885)
                     /gene="cstA"
                     /locus_tag="JN001_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation protein CstA"
                     /protein_id="HAY9052131.1"
                     /translation="MNKSGKYLVWTVLSVMGAFALGYIALNRGEQINALWIVVASVCI
                     YLIAYRFYGLYIAKNVLAVDPKRMTPAVRHNDGLDYVPTDKKVLFGHHFAAIAGAGPL
                     VGPVLAAQMGYLPGMIWLLAGVVLAGAVQDFMVLFVSTRRDGRSLGELVKEEMGPTAG
                     VIALVACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLALFMGIYLRYLRPGRI
                     GEVSVIGLVFLIFAIISGGWVAESPTWAPYFDFTGVQLTWMLVGYGFVAAVLPVWLLL
                     APRDYLSTFLKIGTIVGLAVGILIMRPTLTMPALTKFVDGTGPVWTGNLFPFLFITIA
                     CGAVSGFHALISSGTTPKMLANEGQACFIGYGGMLMESFVAIMALVSACIIDPGVYFA
                     MNSPMAVLAPAGTADVVASAAQVVSSWGFSITPDTLNQIASEVGEQSIISRAGGAPTL
                     AVGMAYILHGALGGMMDVAFWYHFAILFEALFILTAVDAGTRAARFMLQDLLGVVSPG
                     LKRTDSLPANLLATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLC
                     AVVLFKMKRQRYAWVALVPTAWLLICTLTAGWQKAFSPDAKVGFLAIANKFQAMIDSG
                     NIPSQYTESQLAQLVFNNRLDAGLTIFFMVVVVVLALFSIKTALAALKDPKPTAKETP
                     YEPMPENVEEIVAQAKGAH"
     gene            complement(7066..7479)
                     /gene="entH"
                     /locus_tag="JN001_000816"
     CDS             complement(7066..7479)
                     /gene="entH"
                     /locus_tag="JN001_000816"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proofreading thioesterase EntH"
                     /protein_id="HAY9052132.1"
                     /translation="MIWKRHLTLDELNATSDNTMVAHLGIVYTRLGDDVLEAEMPVDT
                     RTHQPFGLLHGGASAALAETLGSMAGFMMTRDGQCVVGTELNATHHRPVSEGKVRGVC
                     QPLHLGRQNQSWEIVVFDEQGRRCCTCRLGTAVLG"
     gene            complement(7482..8228)
                     /gene="dhbA"
                     /locus_tag="JN001_000817"
     CDS             complement(7482..8228)
                     /gene="dhbA"
                     /locus_tag="JN001_000817"
                     /EC_number="1.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706451.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase"
                     /protein_id="HAY9052133.1"
                     /translation="MDFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQY
                     PFATEVMDVADAGQVAQVCQRLLAETERLDVLINAAGILRMGATDQLSKEDWQQTFAV
                     NVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGL
                     ELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIARPQEI
                     ANTILFLASDLASHITLQDIVVDGGSTLGA"
     gene            complement(8228..9085)
                     /gene="entB"
                     /locus_tag="JN001_000818"
     CDS             complement(8228..9085)
                     /gene="entB"
                     /locus_tag="JN001_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin biosynthesis bifunctional
                     isochorismatase/aryl carrier protein EntB"
                     /protein_id="HAY9052134.1"
                     /translation="MAIPKLQAYALPESHDIPQNKVDWAFELQRAALLIHDMQDYFVS
                     FWGENCPMMEQVIANIAALRDYCKQHNIPVYYTAQPKEQSDEDRALLNDMWGPGLTRS
                     PEQQKVVDRLTPDADDTVLVKWRYSAFHRSPLEQMLKESGRNQLIITGVYAHIGCMTT
                     ATDAFMRDIKPFMVADALADFSRDEHLMSLKYVAGRSGRVVMTEELLPAPVPASKAAL
                     REVILPLLDESDEPFDDDNLIDYGLDSVRMMALAARWRKVHGDIDFVMLAKNPTIDAW
                     WKLLSREVK"
     gene            complement(9099..10709)
                     /gene="entE"
                     /locus_tag="JN001_000819"
     CDS             complement(9099..10709)
                     /gene="entE"
                     /locus_tag="JN001_000819"
                     /EC_number="2.7.7.58"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2,3-dihydroxybenzoyl)adenylate synthase"
                     /protein_id="HAY9052135.1"
                     /translation="MSIPFTRWPEEFARRYREKGYWQDLPLTDILTRHAASGSIAVID
                     GELQLSYRELNQAADNLACTLRRQGIKPGETALVQLGNVAELYITFFALLKLGVAPVL
                     ALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLHNDSGE
                     HNLQDAINHPADGFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC
                     QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVT
                     ALVPPAVSLWLQALAEGESRAQLASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGM
                     AEGLVNYTRLDDSAEKIIHTQGYPMCPDDEVWVADAEGNPLPQGEVGRLMTRGPYTFR
                     GYYKSPQHNASAFDANGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIENL
                     LLRHPAVIYAALVSMEDELMGEKSCAYLVVKEPLRAVQVRRFLREQGIAEFKLPDRVE
                     CVDSLPLTAVGKVDKKQLSQWLASRASA"
     gene            complement(10719..11894)
                     /gene="entC"
                     /locus_tag="JN001_000820"
     CDS             complement(10719..11894)
                     /gene="entC"
                     /locus_tag="JN001_000820"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase EntC"
                     /protein_id="HAY9052136.1"
                     /translation="MDTSLAEEVQQTMATLAPNRFFFMSPYRSFTTSGCFARFDEPAV
                     NGDSPDSPFQQKLAALFADAKVQGIKNPVMVGAIPFDPRQPSSLYIPESWQSFSRQEK
                     QASARRFTRSQSLNVVERQAIPEQTTFEQMVARAAALTATPQVDKVVLSRLIDITTDA
                     AIDSGVLLERLIAQNPVSYNFHVPLADGGVLLGASPELLLRKDGERFSSIPLAGSARR
                     QPDEVLDREAGNRLLASEKDRHEHELVTQAMKEVLRERSSELHVPSSPQLITTPTLWH
                     LATPFEGKANSQENALTLACLLHPTPALSGFPHQAATQVIAELEPFDRELFGGIVGWC
                     DSEGNGEWVVTIRCAKLRENQVRLFAGAGIVLASSPLGEWRETGVKLSTMLNVFGLH"
     gene            12269..13225
                     /gene="fepB"
                     /locus_tag="JN001_000821"
     CDS             12269..13225
                     /gene="fepB"
                     /locus_tag="JN001_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe2+-enterobactin ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY9052137.1"
                     /translation="MRLAPLYRNALLLTGLLLSGIAAVQAADWPRQITDSRGTHTLES
                     QPQRIVSTSVTLTGSLLAIDAPVIASGATTPNNRVADDQGFLRQWSKVAKERKLQRLY
                     IGEPSAEAVAAQMPDLILISATGGDSALALYDQLSTIAPTLIINYDDKSWQSLLTQLG
                     EITGHEKQAAERIAQFDKQLAAAKEQIKLPPQPVTAIVYTAAAHSANLWTPESAQGQM
                     LEQLGFTLAKLPTGLNASQSQGKRHDIIQLSGENLAAGLNGESLFLFAGDQKDADAIY
                     ANPLLAHLPAVQNKQVYALGTETFRLDYYSAMQVLERLKALF"
     gene            complement(13229..14479)
                     /gene="entS"
                     /locus_tag="JN001_000822"
     CDS             complement(13229..14479)
                     /gene="entS"
                     /locus_tag="JN001_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin transporter EntS"
                     /protein_id="HAY9052138.1"
                     /translation="MNKQSWLLNLSLLKTHPAFRAVFLARFISIVSLGLLGVAVPVQI
                     QMMTHSTWLVGLSVTLTGGAMFVGLMVGGVLADRYERKKVILLARGTCGIGFIGLCLN
                     ALLPEPSLLAIYLLGLWDGFFASLGVTALLAATPALVGRENLMQAGAITMLTVRLGSV
                     ISPMIGGLLLATGGVAWNYGLAAAGTFITLLPLLSLPALPPPPQPREHPLKSLLAGFR
                     FLLASPLVGGIALLGGLLTMASAVRVLYPALADNWQMSAAEIGFLYAAIPLGAAIGAL
                     TSGKLAHSARPGLLMLLSTLGSFLAIGLFGLMPMWILGVVCLALFGWLSAVSSLLQYT
                     MLQTQTPEAMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGV
                     LLLLVLVELRRFRQTPPQVTASDS"
     gene            14590..15594
                     /gene="fepD"
                     /locus_tag="JN001_000823"
     CDS             14590..15594
                     /gene="fepD"
                     /locus_tag="JN001_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+)-siderophore ABC transporter permease"
                     /protein_id="HAY9052139.1"
                     /translation="MSGSVAVTRAIAVPGLLLLLIIATALSLLIGAKSLPASVVLEAF
                     SGTCQSADCTIVLDARLPRTLAGLLAGGALGLAGALMQTLTRNPLADPGLLGVNAGAS
                     FAIVLGAALFGYSSAQEQLAMAFAGALVASLIVAFTGSQGGGQLSPVRLTLAGVALAA
                     VLEGLTSGIALLNPDVYDQLRFWQAGSLDIRNLHTLKVVLIPVLIAGATALLLSRALN
                     SLSLGSDTATALGSRVARTQLIGLLAITVLCGSATAVVGPIAFIGLMMPHMARWLVGA
                     DHRWSLPVTLLATPALLLFADIIGRVIVPGELRVSVVSAFIGAPVLIFLVRRKTRGGA
                     "
     gene            15591..16583
                     /gene="fepG"
                     /locus_tag="JN001_000824"
     CDS             15591..16583
                     /gene="fepG"
                     /locus_tag="JN001_000824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter permease"
                     /protein_id="HAY9052140.1"
                     /translation="MIYVSRRLLITCLLLISACVVAGIWGLRSGAVTLETSQVFAALM
                     GDAPRSMTMVVTEWRLPRVLMALLIGAALGVSGAIFQSLMRNPLGSPDVMGFNTGAWS
                     GVLVAMVLFGQDLTAIALAAMVGGIVTSLLVWLLAWRNGIDTFRLIIIGIGVRAMLVA
                     FNTWLLLKASLETALTAGLWNAGSLNGLTWAKTSPSAPIIILMLIAAALLVRRMRLLE
                     MGDDTACALGVSVERSRLLMMLVAVVLTAAATALAGPISFIALVAPHIARRISGTARW
                     GLTQAALCGALLLLAADLCAQQLFMPYQLPVGVVTVSLGGIYLIVLLIQESRKK"
     gene            16580..17395
                     /gene="fepC"
                     /locus_tag="JN001_000825"
     CDS             16580..17395
                     /gene="fepC"
                     /locus_tag="JN001_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-enterobactin ABC transporter ATP-binding
                     protein"
                     /protein_id="HAY9052141.1"
                     /translation="MTESVARLRGEQLTLGYGKYTVAENLTVEIPDGHFTAIIGPNGC
                     GKSTLLRTLSRLMTPAHGHVWLDGEHIKHYASKEVARRIGLLAQNATTPGDITVQELV
                     ARGRYPHQPLFTHWRKEDEEAVTKAMQATGITHLADQSVDTLSGGQRQRAWIAMVLAQ
                     ETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALR
                     EGKIVAQGAPKEIVTAELIERIYGLRCMIIDDPVAGTPLVVPLERTAPSTANS"
     gene            complement(17392..18525)
                     /gene="fepE"
                     /locus_tag="JN001_000826"
     CDS             complement(17392..18525)
                     /gene="fepE"
                     /locus_tag="JN001_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS O-antigen length regulator"
                     /protein_id="HAY9052142.1"
                     /translation="MSSLNIKQGSDAHFSEYPLASPSSNEIDLLNLIEVLWRAKKTVM
                     AVVFAFACAGLLISFILPQKWTSSAVITPAEAIQWQDLEKTFTKLRVLDLDVNIDRGG
                     AFNLFIKKFQSVSLLEEYLRSSPYVMDQLKEAKIDELDLHRAIVALSEKMKAVDDNAS
                     KKKDEPSLYTSWTLSFTAPTSKEAQTVLSGYIDYISALVVKESIENVRNKLEIKTQFE
                     KEKLAQDRIKTKNQLDANIQRLNYSLDIANAAGIKKPVYSNGQAVKDDPDFSISLGAD
                     GIERKLEIEKAVTDVAELNGELRNRQYLVEQLTKANVNDVNFTPFKYQLSPSLPVKKD
                     GPGKAIIVILSALIGGMVACGSVLLRYAMASRKQDAMMADHLV"
     gene            complement(18740..22621)
                     /gene="entF"
                     /locus_tag="JN001_000827"
     CDS             complement(18740..22621)
                     /gene="entF"
                     /locus_tag="JN001_000827"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin non-ribosomal peptide synthetase
                     EntF"
                     /protein_id="HAY9052143.1"
                     /translation="MSQHLPLVAAQPGIWMAEKLSDLPSAWSVAHYVELTGEVDAPLL
                     ARAVVDGLAQADTLRMRFTEDNGEVWQWVDDALTFELPEIIDLRTNIDPHGTAQALMQ
                     ADLQQDLRVDSGKPLVFHQLIQVADNRWYWYQRYHHLLVDGFSFPAITRQIANIYCTW
                     LRGEPTPASPFTPFADVVEEYQQYRESEAWQRDAAFWAEQRRQLPPPASLSPAPLPGR
                     SASADILRLKMEFTDGEFRQLATQLSGVQRTDLALALTALWLGRLCNRMDYAAGFIFM
                     RRLGSAALTATGPVLNVLPLGIHIAAQETLPELATRLAAQLKKMRRHQRYDAEQIVRD
                     SGRAAGDEPLFGPVLNIKVFDYQLDIPGVQAQTHTLATGPVNDLELALFPDEHGDLSI
                     EILANKQRYDEPTLIQHAERLKMLIAQFAADPALLCGDVDIMLPGEYAQLAQINATQV
                     EIPETTLSALVAEQAAKTPDAPALADARYQFSYREMREQVVALANLLRERGVKPGDSV
                     AVALPRSVFLTLALHAIVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTDDQLPRF
                     ADVPDLTNLCYNAPLKPQGSAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRL
                     LWMQNHYLLTGEDVVAQKTPCSFDVSVWEFFWPFIAGAKLVMAEPEAHRDPLAMQQFF
                     AEYGVTTTHFVPSMLAAFVASLTPQTARQSCATLKQVFCSGEALPADLCREWQQLTSV
                     PLHNLYGPTEAAVDVSWYPAFGEELAQVRGSSVPIGYPVWNTGLRILDAMMHPVPPGV
                     AGDLYLTGIQLAQGYLGRPDLTASRFIADPFVPGERMYRTGDVARWLDNGAVEYLGRS
                     DDQLKIRGQRIELGEIDRVMQALPDVEQAVTHACVINQAAATGGDARQLVGYLVSQSG
                     LPLDTSALQAQLRETLPPHMVPVVLLQLPLLPLSANGKLDRKALPLPELKAQAPGRAP
                     KAGSETIIAAAFASLLGCDVQDADADFFALGGHSLLAMKLAAQLSRQVARQVTPGQVM
                     VASTVAKLATIIDAEEDSTRRMGFETILPLREGNGPTLFCFHPASGFAWQFSVLSRYI
                     DPQWSIIGIQSPRPNGPMHTAANLDEVCEAHLATLLEQQPHGPYYLLGYSLGGTLAQG
                     IAARLRARGEQVAFLGLLDTWPPETQNWQEKEANGLDPEVLAEINREREAFLAAQQGS
                     TSTELFTTIEGNYADAVRLLTTAHSVPFDGKATLFVAERTLQEGMSPERAWSPWIAEL
                     DIYRQDCAHVDIISPGAFVKIGPIIRATLNR"
     gene            complement(22618..22836)
                     /locus_tag="JN001_000828"
     CDS             complement(22618..22836)
                     /locus_tag="JN001_000828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MbtH family protein"
                     /protein_id="HAY9052144.1"
                     /translation="MAFSNPFDDPQGAFYILRNAQGQFSLWPQQCALPAGWDIVCQPQ
                     SQESCQQWLEAHWRTLTPANFTQLQEAQ"
     gene            complement(22839..24041)
                     /gene="fes"
                     /locus_tag="JN001_000829"
     CDS             complement(22839..24041)
                     /gene="fes"
                     /locus_tag="JN001_000829"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterochelin esterase"
                     /protein_id="HAY9052145.1"
                     /translation="MTALKVGSESWWQSKHGPEWQRLNDEMFEVTFWWRDPQGSEEYS
                     PIKRVWVYITGVTDHHQNSQPQSMQRIAGTDVWQWTTQLNANWRGSYCFIPTERDDIF
                     SAPSPDRLELREGWRKLLPQAIADPLNPQSWKGGRGHAVSALEMPQAPLQPGWDCPQA
                     PEIPAKEIIWKSERLKNSRRVWIFTTGDATAEERPLAVLLDGEFWAQSMPVWPVLTSL
                     THRQQLPPAVYVLIDAIDTTHRAHELPCNADFWLAVQQELLPLVKAIAPFSDRADRTV
                     VAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPHRGGQQEGVLLEKLKAGEVSAEG
                     LRIVLEAGIREPMIMRANQALYAQLHPIKESIFWRQVDGGHDALCWRGGLMQGLIDLW
                     QPLFHDRS"
     gene            24284..26524
                     /gene="fepA"
                     /locus_tag="JN001_000830"
     CDS             24284..26524
                     /gene="fepA"
                     /locus_tag="JN001_000830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore enterobactin receptor FepA"
                     /protein_id="HAY9052146.1"
                     /translation="MNKKIHSLALLVNLGIYGVAQAQEPTDTPVSHDDTIVVTAAEQN
                     LQAPGVSTITADEIRKNPVARDVSEIIRTMPGVNLTGNSTSGQRGNNRQIDIRGMGPE
                     NTLILIDGKPVSSRNSVRQGWRGERDTRGDTSWVPPEMIERIEVLRGPAAARYGNGAA
                     GGVVNIITKKGSGEWHGSWDAYFNAPEHKEEGATKRTNFSLTGPLGDEFSFRLYGNLD
                     KTQADAWDINQGHQSARAGTYATTLPAGREGVINKDINGVVRWDFAPLQSLELEAGYS
                     RQGNLYAGDTQNTNSDAYTRSKYGDETNRLYRQNYSLTWNGGWDNGVTTSNWVQYEHT
                     RNSRIPEGLAGGTEGKFNEKATQDFVDIDLDDVMLHSEVNLPIDFLVNQTLTLGTEWN
                     QQRMKDLSSNTQALTGANTGGAIDGVSATDRSPYSKAEIFSLFAENNMELTDSTIVTP
                     GLRFDHHSIVGNNWSPALNISQGLGDDFTLKMGIARAYKAPSLYQTNPNYILYSKGQG
                     CYASAGGCYLQGNDDLKAETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVG
                     QNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNITYMLKSENKTTGDRLSII
                     PEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLS
                     ATRDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYM
                     SVNTHF"
     gene            26699..27319
                     /gene="entD"
                     /locus_tag="JN001_000831"
     CDS             26699..27319
                     /gene="entD"
                     /locus_tag="JN001_000831"
                     /EC_number="6.3.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415115.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterobactin synthase subunit EntD"
                     /protein_id="HAY9052147.1"
                     /translation="MKTTHTSLPFAGHTLHFVEFDPANFCEQDLLWLPHYAQLQHAGR
                     KRKAEHLAGRIAAIYALREYGYKCVPAIGELRQPVWPAEVYGSISHCGATALAVVSRQ
                     PIGVDIEEIFSAQTATELTDNIITPAEHERLADCGLAFSLALTLAFSAKESAFKASEI
                     QTDAGFLDYQIISWNKQQVIIHRENEMFAVHWQIKEKIVITLCQHD"
     gene            complement(27441..27593)
                     /locus_tag="JN001_000832"
     CDS             complement(27441..27593)
                     /locus_tag="JN001_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY9052148.1"
                     /translation="MLTKYALAAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVL
                     AYEPKK"
     gene            28046..29164
                     /locus_tag="JN001_000833"
     CDS             28046..29164
                     /locus_tag="JN001_000833"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HAY9052149.1"
                     /translation="MPLPDFHVSEPFTLGIELEMLVVNPPGYDLSQDSSILIDAVKNK
                     ITAGEVKHDITESMLELATDVCRDINQAAGQFSAMQKVVLQAAADHHLEICGGGTHPF
                     QKWQRQEVCDNERYQRTLENFGYLIQQVTVFGQHVHVGCASGDDAIYLLHGLSRFVPH
                     FIALSAASPYMQGTDTRFASSRPNIFSAFPDNGPMPWVSNWQQFEALFRCLSYTTMID
                     SIKDLHWDIRPSPHFGTVEVRVMDTPLTLSHAVNMAGLIQATAHWLLTERPFKHQEKD
                     YLLYKFNRFQACRYGLEGVITDPHTGDRRPLTEDTLRLLEKIAPSAHKIGASSAIEAL
                     HRQVVSGLNEAQLMRDFVADGGSLIGLVKKHCEIWAGD"
     gene            29230..29478
                     /locus_tag="JN001_000834"
     CDS             29230..29478
                     /locus_tag="JN001_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1158 domain-containing protein"
                     /protein_id="HAY9052150.1"
                     /translation="MKHPLETLTTAAGILLMAFLSCLLLPAPALGLTLAQKLVTMFHL
                     MDLSQLYTLLFCLWFLVLGAIEYFVLRFIWRRWFSLAD"
     gene            29543..29911
                     /locus_tag="JN001_000835"
     CDS             29543..29911
                     /locus_tag="JN001_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY9052151.1"
                     /translation="MDKQSLHETAKRLALELPFVELCWPFGPEFDVFKIGGKIFMLSS
                     ELRGVPFINLKSDPQKSLLNQQIYPSIKPGYHMNKKHWISVYPGEEISEALLRDLIND
                     SWNLVVDGLAKRDQKRVRPG"
     gene            30005..30657
                     /gene="nfsB"
                     /locus_tag="JN001_000836"
                     /pseudo
     CDS             30005..30657
                     /gene="nfsB"
                     /locus_tag="JN001_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NAD(P)H nitroreductase"
     gene            30765..32012
                     /locus_tag="JN001_000837"
     CDS             30765..32012
                     /locus_tag="JN001_000837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HAY9052152.1"
                     /translation="MQDLISQVGDLAGIEIDHTTSMVMIFGIIFLTAVVVHIILHWVV
                     LRTFEKRAIASSRLWLQIITQNKLFHRLAFTLQGIIVNIQAVFWLQKGTEAADILTTC
                     AQLWIMMYALLSVFSLLDVILNLAQKFPAASQLPLKGIFQGIKLIGAILVGILMISLL
                     IGQSPAILISGLGAMAAVLMLVFKDPILGLVAGIQLSANDMLKLGDWLEMPKYGADGT
                     VIDIGLTTVKVRNWDNTITTIPTWSLVSDSFKNWSGMSASGGRRIKRSISIDVTSIRF
                     LDEDEMQRLNKAHLLKPYLTSRHQEINEWNRQQGSTESILNLRRMTNIGTFRAYLNEY
                     LRNHPRIRKDMTLMVRQLAPGDNGLPLEIYAFTNTVVWLEYESIQADIFDHIFAIVEE
                     FGLRLHQSPAGNDIRSLAGAFKQ"
     gene            complement(32080..33456)
                     /gene="pheP"
                     /locus_tag="JN001_000838"
     CDS             complement(32080..33456)
                     /gene="pheP"
                     /locus_tag="JN001_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine transporter"
                     /protein_id="HAY9052153.1"
                     /translation="MKNASTVSEDTASNQEPTLHRGLHNRHIQLIALGGAIGTGLFLG
                     IGPAIQMAGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFL
                     SGWNYWVMFVLVGMAELTAAGIYMQYWFPDVPTWIWAAAFFIIINAVNLVNVRLYGET
                     EFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASIDNLWRYGGFFATGWNGLILSLAVI
                     MFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRILLFYICSLVVLLALYPWVEVKSN
                     SSPFVMIFHNLDSNEVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR
                     VSHRGVPINSLMLSGAITSLVVLINYLLPQKAFGLLMALVVATLLLNWIMICLAHLRF
                     RAAMRRQGRETQFKALLYPFGNYLCIAFLGMILLLMCTMDDMRLSAILLPVWIVFLFV
                     AFKTLRRK"
     gene            complement(33558..36701)
                     /gene="cusA"
                     /locus_tag="JN001_000839"
     CDS             complement(33558..36701)
                     /gene="cusA"
                     /locus_tag="JN001_000839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter permease
                     subunit CusA"
                     /protein_id="HAY9052154.1"
                     /translation="MIEWIIRRSVANRFLVLMGALFLSIWGTWTIINTPVDALPDLSD
                     VQVIIKTSYPGQAPQIVENQVTYPLTTTMLSVPGAKTVRGFSQFGDSYVYVIFEDGTD
                     PYWARSRVLEYLNQVQGKLPAGVSAELGPDATGVGWIYEYALVDRSGKHDLADLRSLQ
                     DWFLKYELKTIPDVAEVASVGGVVKEYQVVIDPQRLAQYGISLAEVKSALDASNQEAG
                     GSSIELAEAEYMVRASGYLQTLDDFNHIVLKASENGVPVYLRDVAKVQVGPEMRRGIA
                     ELNGEGEVAGGVVILRSGKNAREVIAAVKDKLETLKSSLPEGVEIVTTYDRSQLIDRA
                     IDNLSGKLLEEFIVVAVVCALFLWHVRSALVAIISLPLGLCIAFIVMPFQGLNANIMS
                     LGGIAIAVGAMVDAAIVMIENAHKRLEEWQHQHPDATLDNKTRWQVITDASVEVGPAL
                     FISLLIITLSFIPIFTLEGQEGRLFGPLAFTKTYAMAGAALLAIVVIPILMGYWIRGK
                     IPPESSNPLNRFLIRVYHPLLLKVLHWPKTTLLVAALSVLTVLWPLNKVGGEFLPQIN
                     EGDLLYMPSTLPGISAAEAASMLQKNDKLIMSVPEVARVFGKTGKAETATDSAPLEMV
                     ETTIQLKPQDQWRPGMTMDKIIEELDNTVRLPGLANLWVPPIRNRIDMLSTGIKSPIG
                     IKVSGTVLADIDAMAEQIEEVARTVPGVASALAERLEGGRYINVEINREKAARYGMTV
                     ADVQLFVTSAVGGAMVGETVEGIARYPINLRYPQSWRDSPQALRQLPILTPMKQQITL
                     ADVADVKVSTGPSMLKTENARPTSWIYIDARDRDMVSVVHDLQKAIVEKVQLKPGTSV
                     AFSGQFELLERANHKLKLMVPMTLMIIFVLLYLAFRRVGEALLIISSVPFALVGGIWL
                     LWWMGFHLSVATGTGFIALAGGAAEFGVVMLMYLRHAIEAEPSLNNPQTFSEQKLDEA
                     LYHGAVLRVRPKAMTVAVIIAGLLPILWGTGAGSEVMSRIAAPMIGGMITAPLLSLFI
                     IPAAYKLMWLHRHRVRK"
     gene            complement(36713..>37820)
                     /gene="cusB"
                     /locus_tag="JN001_000840"
     CDS             complement(36713..>37820)
                     /gene="cusB"
                     /locus_tag="JN001_000840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Cu(+)/Ag(+) efflux RND transporter periplasmic
                     adaptor subunit CusB"
                     /protein_id="HAY9052155.1"
                     /translation="RKILFWYDPMYPNTRFDKPGKSPFMDMDLVPKYADEESSASGVR
                     IDPTQTQNLGVKTATVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVG
                     DKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLI
                     ATQKIQTRFTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGMDPVWVTAAIPESIAWL
                     VKDASQFTLTVPARPDKTLTIRKWTLLPGVDAATRTLQLRLEVDNADEALKPGMNAWL
                     QLNTASEPMLLIPSQGLIDTGSEQRVITIDADGRFVPKRVAVFQASQGVTALRSGLAE
                     GEKVVSSGLFLIDSEANISGALERMRSESATHAH"
BASE COUNT         9073 a        10550 c         9636 g         8561 t
ORIGIN      
        1 taatttgtag taataagcat ccgcgaatta ctgacaatag cacttatgaa caaattatgg
       61 cagaagagtt cacccaatta atatccaaat cagcaggagt tgatgatatt caaatggaaa
      121 tagacgagaa gtttatgaat cgcaaaattt catttcgtgg ttcctctttg ctgacaataa
      181 ttaatagcat tgcagttaca gatttactgg gaatagtccc ctatgaactt tataactccc
      241 accgtgactt tcttaattta aaagagataa aactagaaca tccgttacct tcaataaagc
      301 tttacatttc ctataataaa tcttctttaa ataatttggt gttctcccga tttattgacc
      361 gtctaaatga gagtttttga tatataacta cagacagcta ctataacttt catctattta
      421 ttcacagcgc gaatgaaaaa taaaacactc tgctttacag tgtttacttt ataattaaca
      481 gtcttatctc actgttcacc ctgtaacgtt cagagagcgt cttcagatgt ctatttataa
      541 aattcctctt ccgctcaata ttctggaagc tgcacgagag cgtattacct ggacactcaa
      601 caccctaccc cgcgtttgtg tctcattttc tggcggcaaa gactctggtt taatgctgca
      661 tctgacagcc gaacttgccc gacaaatggg caaaaaaatc tgcgttttgt ttatcgactg
      721 ggaggcgcaa ttctcttgca ctattaacta tgttcagtcc ctgcgcgagt tgtacaccga
      781 tgtcatcgaa gagttttact gggttgcgct cccgcttacg acgcaaaatt ccctttcaca
      841 ataccaaccc gaatggcagt gctgggaacc tgatgtcgaa tgggtgcgtc agcccccgca
      901 agatgcgata accgatcctg actttttctg cttttaccag ccaggcatga ccttcgaaca
      961 atttgtacgt gagtttgccg aatggttttc acaaaaacgt ccggcggcga tgatgatcgg
     1021 catccgtgcg gatgagtcct acaaccgttt tgtcgccatc gccagtttaa ataaacaacg
     1081 ttttgccgac gataaaccat ggactacggc cgcaccaggc ggtcatagct ggtacattta
     1141 ccccatttac gactggaaag tggctgatat ctggacctgg tatgcaaatc atcaaagtct
     1201 ctgcaaccca ctgtataacc taatgtatca ggcaggcgtt cctctgcgtc atatgcgaat
     1261 ttgcgaacct tttggcccgg agcaacgaca aggattatgg ctctatcacg ttatcgaacc
     1321 ggatcgctgg gctgctatgt gcgcacgagt cagcggggta aaaagtggcg gcatttacgc
     1381 cggacatgac aatcatttct atgggcatcg gaaaatcctc aagccagaac atttagactg
     1441 gcaagaatat gcattattgc tgctcaatag catgccggaa gatgatcgca tcaaagcgat
     1501 taatgaaatc cgcatggcga tccatcaggt tagccccttt cgtgaagagc cagtggattg
     1561 cgttctgtgg gttaaaaaca gccaacttat gcctaatgat tacaacccaa acaacgtggc
     1621 accacccgaa aaaaaactgc tgcaaaaatc cattgaaata gatggtttta cccaacccat
     1681 tgtggtcaca catacggata aaaatgccat ggaaatcgtg gatggttttc accgccatga
     1741 aattggtaaa ggctcatcat cattaaaatt acgcttaaaa ggttatttgc cggtgacctg
     1801 tctggaaggt acgcgtaatc aacgcatcgc cgcgactatt cgtcataatc gcgctcgtgg
     1861 acgccatcaa atcaccgcca tgtcggaaat cgtccgtgaa cttagccagt tgggatggga
     1921 cgataataaa attggcaaag agctgggaat ggacagcgac gaagtgctgc gcctgaagca
     1981 aattaacggc ctgcaagagt tgtttgccga ccgtcaatat tcccgcgcct ggacggttaa
     2041 atagctaaag ctggcgcagg cgttcagctg ctgccagcaa cgtcgattcc ttcttggcaa
     2101 aacagagacg aatcagttta tgtgggaagg gatcggcgca aaacaccgac agcggaatcg
     2161 ccgccacgcc gtgctcccgc gtcagccact ggcaaaactc aacatcatcc agggtagaaa
     2221 cctcgctgta atccaccagc aaaaagtatg taccttcaca cggtaaaatc tccagccggc
     2281 tttcatttaa agcattcacc agaatatcgc gcttctggcg ataaaagtcc ggtaacgcaa
     2341 gataatgctc aggttctgca cgtagcatat cagcaagcgc cagctgtgcc ggggtattca
     2401 ccgaaaaggt cagatactga tgtaccttgc gaatttcggc gctgatgggc gctggcgcaa
     2461 cacaataacc cactttccag ccggtcatat gatagatctt gccaaatgaa gaaaccgcca
     2521 ctgcccgctc acgcagctgc ggatgcgcca gcacactggc atggccctgt tgtgaaaagt
     2581 tgatgtgctc gtagacttca tcgctaatga caaaaatctc gtgcccggcg atcgcctgcc
     2641 acaaagcggc gaaatcagcc tgctgccaga cagttgcact ggggttatgc ggagtgttga
     2701 ggatcaccag tctggtgcgc tcgcttaata atgcggcaaa ttcctgccag tcaaggtggt
     2761 tgcagtgcca tacgcttcac tattccccca gaaagcgcga tggcgggggc gtaactgtca
     2821 tagctgggat caaaacaaat cacttcatcg ccattgcgca ccagtgcggt aatcgccgcg
     2881 tataacgctt ccgtcgcccc tgccgttacg gtgatatcgc tatcggcatc tggttgatag
     2941 ccatacaaac gttccgtttt ctgagcaatc gcctcgcgca aggcctgcac gccggtcatg
     3001 ggcgcgtatt ggtttgcccc ctgggcaacg tggtacgcca gccgctcctg taaatagcgc
     3061 ggaccatcaa aatcaggaaa gccttgcgac aggttaatcg cctggtgttg ctgcgccagc
     3121 gcgctcatct gggtgaaaat agtggtgcca agttgtggaa gtttgctttg tggaatcaga
     3181 gggttatttg tcatttttat tgtacctgac gaagttgcgt gttgaaggca ctataacacg
     3241 atgctagtat ttggcaatca agacgtttag atgtctaaat aaaacaataa ggacaacaca
     3301 acatgcctca caatcctatc cgcgtggtcg tcggcccggc taactacttt tcacatccaa
     3361 gaagtttcaa tcacctgaac gattttttca ctgatgaaca actttctcgc gcggtgtgga
     3421 tctacggcaa acgcgccatt gctgcggcgc aaaccaaact tccgccagcg tttggacttc
     3481 caggggcaaa gcatattttg tttcgtggtc attgcagcga aagcgatgta cagcaactgg
     3541 cggctgagtc cggtgacgat cgcagcgtgg tgattggcgt cggcggcggc gcactgctcg
     3601 acaccgcgaa agccctcgcc cgccgtctcg gtctgccatt tgttgccgtt ccgacgatcg
     3661 ccgctacctg cgccgcctgg acaccgctct ccgtctggta taacgatgcc ggacaggcgc
     3721 tgcattatga gattttcgac gacgccaatt ttatggtgct ggtggaaccg gagattatcc
     3781 tcaatgcacc gcaacaatat ctgctggcgg ggatcggtga cacgctggcg aaatggtatg
     3841 aagcggtggt gctggctccg caaccagaaa cgttgccgct aaccgtgcgg ctggggatca
     3901 ataatgcgca ggccattcgc gacgtcttgt taaacagtag cgaacaggca cttgccgatc
     3961 agcaaaatca gcagttaacg caatcatttt gcgatgtggt ggatgctatt attgctggtg
     4021 gtgggatggt cggtggtctg ggcgatcgtt ttacgcgtgt ggcggcggct catgccgtgc
     4081 ataacggtct gactgtcctg ccgcaaaccg agaagtttct tcacggcacc aaagtcgctt
     4141 acggaattct ggtgcaaagc gccttgctgg gtcaggatga tgtgctggcg caattaaccg
     4201 gggcgtatca gcgttttcat ctgccgacta cgctggcgga gctggaagtg gatatcaata
     4261 atcaggcgga gatcgacaaa gtgattgccc acaccttgcg cccggtggag tccattcatt
     4321 acctgccagt cacgctgaca ccagatacgt tgcgtgcagc gttcgaaaaa gtggaatcgt
     4381 ttaaagcctg acgtgcaaat ttagcagcag cgcgcgccgc cttttccacc gtagcgcgcg
     4441 tcctgccgct cacggaaaaa ctcctcgtag gtcatcggcg tttgatcggg atggttaacc
     4501 cgcatatgtt cgacatagtt gtcgtaatca ggcataccaa tcatcagctt cgccgcctga
     4561 cctaaatatt ttccggcttt tgccagtgaa tcaaacatct tggcctccgc taaccatgtt
     4621 gctgaaagag tgccggatgc ggcgtgaacg ctttatccgg cctacaaatg ctatcaacgc
     4681 actcggtcag tcccctcgcc ccatcgggga gagggttagg gtgaggggga accctcggca
     4741 ctatgccaac attcgccaac atcccccctc actctgactt tagtgcgcgc ctttcgcctg
     4801 cgctacgatc tcctcgacat tttccggcat cggctcatac ggcgtttctt tcgccgttgg
     4861 cttcggatct ttcaatgccg caagtgccgt cttaatcgag aacagtgcca gaaccaccac
     4921 gaccaccata aagaagatgg ttaacccggc atccagacgg ttgttgaaca ccagttgcgc
     4981 cagctgtgac tcagtatact gcgacggaat attgccgctg tcgatcattg cctggaactt
     5041 gttagcaatg gccaggaagc cgactttcgc atccgggcta aacgctttct gccagccagc
     5101 ggtcagggta caaatcagca gccaggccgt tggtaccagc gccacccagg cgtaacgttg
     5161 acgtttcatc ttgaacaaca ccacggcaca gagcatcagc gccatccctg ccagcatctg
     5221 gttggcaata ccaaacagcg gccacagagt gttaataccg cccagcggat cgaccacgcc
     5281 ctgatggagg aagtagcccc acgccagtac gcacagcgcc gttgccagca ggttagcagg
     5341 cagtgaatcg gtccgcttca ggccaggaga caccacgccc agcagatcct gcaacataaa
     5401 gcgcgcagca cgcgtacccg catctaccgc cgtcagaata aacagagctt caaacagaat
     5461 ggcgaagtga taccagaacg ccacatccat cataccaccc agcgcaccgt gcaggatgta
     5521 agccatcccc accgccaacg tcggcgcacc gcccgcacgg gaaatgatcg actgttcacc
     5581 cacttcgctg gcaatctggt tgagcgtatc tggtgtaatg ctaaagcccc agctactcac
     5641 cacctgcgcg gcagaagcga ccacatccgc cgtccctgct ggagccagca ccgccattgg
     5701 gctgttcatg gcaaagtaaa cgcccggatc gatgatacag gcggaaacca gcgccataat
     5761 cgccacgaag gattccatta acattccacc gtagccgata aaacaagcct gcccttcgtt
     5821 cgccagcatc ttcggcgtgg tgccggaaga gatcagcgca tggaagccag acaccgcgcc
     5881 acaggcgatg gtgataaaca ggaacgggaa caggttaccg gtccataccg ggccagtgcc
     5941 atcgacaaat ttggtcagcg caggcatggt cagcgtcggg cgcataatca aaatgcctac
     6001 cgccagaccg acgatcgtcc cgattttcag gaaggtagag aggtagtcac gcggggccag
     6061 cagcaaccac accggcagca ccgccgccac aaaaccgtaa cccaccagca tccaggtcag
     6121 ctgcacgccg gtaaagtcaa agtacggtgc ccaggtcgga ctttctgcca cccagccgcc
     6181 agagataatg gcgaaaatca ggaataccag accgatgacc gacacttcac caatacgccc
     6241 cggacgcaga tagcgcaggt agatccccat aaacagcgcc agcggaatgg tgaacgcaac
     6301 ggtatacgtt ccccacgggc tatgagtcag ggctttcacc acgatcatcg ccagtactgc
     6361 aaggataatg accatgatca taaagcaggc caccagcgct atcaccccgg cggttggccc
     6421 catctcttct ttgaccagct cacccagcga tcgaccgtca cggcgcgtag aaacaaacag
     6481 caccatgaaa tcctgcaccg caccggcgag aaccaccccg gcgagtagcc agatcatccc
     6541 cggcaggtag cccatttgcg ctgccagcac cggcccaacc aacggacctg ctccggcgat
     6601 ggccgcaaaa tggtgaccga acagcacttt cttgtccgtc ggcacatagt ccagcccgtc
     6661 gttatggcgc accgctggcg tcatacgctt cgggtcaacc gccagcacat ttttggcgat
     6721 atacaaccca taaaaacggt aagcgatcag atagatacag accgacgcca ccacaatcca
     6781 cagcgcgttg atctgttccc cacgatttaa agcaatgtat cccagagcaa atgctcccat
     6841 tacagagagc actgtccaga cgaggtattt ccctgatttg ttcatagttg ttatccgtgt
     6901 gcgtgtccat agagatgtta cattttgttt ctataacatc tttgtacgat ttaacaacac
     6961 ggtaactatg taaatcggag ttgaaaccaa tatttaactt aacaatgtta actcgatcac
     7021 tccgttaacc gagttttcct gcaatctcat ttaattctgt cgggctcatc ccaaaactgc
     7081 cgtacccagc cgacaagtgc agcaacgccg cccctgttca tcgaaaacga cgatttccca
     7141 gctctgattt tgccgcccaa gatgcagcgg ctggcagacg ccgcgtacct tgccttcaga
     7201 caccgggcga tgatgggtgg cgttaagttc cgtgcccacc acacactgcc cgtcacgggt
     7261 catcataaat ccggccatcg atcccagcgt ttcagccagc gccgccgacg cgccgccatg
     7321 cagcaggcca aacggctgat gagtacgggt atcaaccggc atttcggctt ccagcacatc
     7381 atctcccaga cgggtataca caattcccag atgcgccacc attgtgttat cgctggtggc
     7441 gttcagttcg tcgagcgtta aatggcgttt ccagatcatg cttatgcccc cagcgttgag
     7501 ccgccatcga ccacaatatc ctgtagggtg atatggctgg cgaggtcaga ggcgaggaac
     7561 aaaatcgtgt tggcgatctc ttgtggacgg gcgattttcc ccagcggaat gccgagttta
     7621 aactgctcgc caaagccgcg aatacgctgt tcttcggcgt catcgctcac ccacagcgtg
     7681 cgttgcatat cggtgtcggt ggagccaggc gaaaccacat tacagcgcac gccgctaccc
     7741 gccagttcca gcccgacgct caacgccagg cttttcagcg ccgctttcga tgcgccataa
     7801 gcactcatac caatacgcgg cgtgtgtgcg gcgtcggacg ccacagtgac aatcgccccg
     7861 ccccgctgac ggcgaaactg gttcatggtt tgctggaaca ggttaaacgc accgccgacg
     7921 ttaaccgcaa aagtctgctg ccagtcctct ttactgagct gatcggtcgc gcccatgcgc
     7981 aaaattcccg ccgcattgat cagcacgtcc agtcgctccg tttcagctaa cagtcgctga
     8041 catacctgcg ccacctgccc ggcgtcggca acatccatta cttcggtcgc aaagggatat
     8101 tgctcctgag tgaacgcttg atcaaaacct gtaactttcg ctcccgcctc aacaaacgcc
     8161 agcgccgtgg cgtagccgat acctttacct gcgccggtta cccagacatt tttaccgctg
     8221 aaatccatta tttaacctcg cgggagagta gcttccacca ggcgtcgatg gtcgggtttt
     8281 tcgccagcat gacaaagtcg atatcaccat gcactttgcg ccagcgcgcc gccagcgcca
     8341 tcatgcgcac cgaatccaga ccgtagtcga tcaggttgtc gtcatcgaac ggttcatcgg
     8401 actcgtccag caacggcagg ataacctcac gcagcgccgc tttgctggcg gggacaggtg
     8461 ctggcagtaa ttcttcagtc atcaccaccc ggccagaccg cccggccaca tatttcagcg
     8521 acatcaaatg ctcgtcacgg ctgaaatcgg ccagcgcatc cgccaccata aacggtttaa
     8581 tatcgcgcat aaatgcgtcg gttgcggtgg tcatacagcc aatgtgggca tataccccgg
     8641 taataatcag ctggttacgt ccactctctt tgagcatttg ctccagcgga gaacgatgaa
     8701 acgcgctgta gcgccacttc accagcaccg tgtcgtcggc atctggcgtc aggcgatcca
     8761 ccaccttttg ctgttccggc gaacgggtca ggcccggccc ccacatatca ttcaacagcg
     8821 cccgatcttc atcgctctgc tctttcggct gggcggtgta ataaactggg atattgtgct
     8881 gtttgcagta gtcgcgcagc gcagcaatat tcgcgatcac ctgctccatc atcgggcagt
     8941 tctcgcccca gaagctgaca aaatagtcct gcatatcatg gattaacaac gcggcacgtt
     9001 gcagttcaaa ggcccagtca actttattct gcggaatatc gtgagactcc ggcagtgcgt
     9061 aagcctgtaa ttttggaata gccatcgtgt tctctccttc aggctgatgc gcgtgacgcc
     9121 agccactgac ttaattgttt tttatcgact ttcccgaccg ccgtcagcgg aagtgaatct
     9181 acacactcca cgcgatccgg taatttaaat tcggcaatac cctgttcacg caggaaacga
     9241 cgcacctgca ccgcgcgcag cggctctttt accaccagat aagcacagct tttttcgccc
     9301 atcagctcat cttccatgct caccagtgcg gcatagatca ccgccggatg gcgcagcagc
     9361 aggttttcga tctcttcggc agcgatcttc tcgccgccac ggttgatctg atctttctcg
     9421 cgcccctgca cggtgatgta accctctgga tcaatagaga tcagatcgcc ggaacagtaa
     9481 aaaccgttgg catcaaaggc gctggcattg tgctgcggac ttttgtaata accgcggaag
     9541 gtgtacggcc cgcgcgtcat caggcgtccg acttcccctt gcggcagtgg atttccttcg
     9601 gcatcggcaa cccacacttc atcgtccgga cacattgggt aaccctgggt atggataatt
     9661 ttctccgcgc tatcatcaag acgggtgtag ttcaccagcc cttccgccat gccaaacacc
     9721 tgctgcaact ggcagccaat ctcagcggga atacgcgccg caagggtggc agaaagacgt
     9781 gcgccgccga cctgtaacag tttcagcgag gcaagctgcg cccggctttc gccttcagcc
     9841 agcgcctgca accacaggct gactgccggc ggcaccagcg cggtgacgtt cacctgatgt
     9901 ttttcaatca atgggaagca aagcgtagcg ctgggatcgg ccgccagaac aaccgttcct
     9961 ccggcaagaa agacgcccag cgatcctggc gaactcatgg cgtagttatg agccgccggg
    10021 atcgcgcaca ggtagcgcgt ctgttgtgtg aactgacaaa tctcgacgct acgacgcacg
    10081 ctgtagtagt agtcgttatg agtgcgcggg atcagcttcg gtgtaccggt ggtgccgccg
    10141 gaaagctgga aataggccac ttcatcagca ggtgatggcg tggcagtaaa accgtctgcc
    10201 ggatggttaa tcgcatcctg caagttatgc tcaccgctgt cgttgtgcag ttgcaccacg
    10261 cgaatggagg aatgttctgt gacgaaagta ttgaggaaat catccccgct aaacagcgca
    10321 tgttggcgat cggcaatcag caatgcgggt tcaatctggc tggcataggc gttcagttca
    10381 ctacgctgat ggctgaacaa cgccagcacc ggcgcaacgc ccagtttcag cagcgcgaaa
    10441 aaggtaatat acaattcagc gacgttaccc agttgtacca gcgcggtttc accaggttta
    10501 atgccctgac ggcgtaaagt acacgcgagg ttatccgccg cctgattcag ctcccggtaa
    10561 ctcaactgta gctcgccgtc gataaccgcg atgctgccac tcgcagcgtg gcgagtcaga
    10621 atgtcggtca gcggcaaatc ctgccagtag cctttttccc gatagcgacg ggcaaactct
    10681 tccggccagc gggtgaatgg aatgctcatc ctcgctcctt aatgcaatcc aaaaacattc
    10741 aacatggtag aaagtttgac gcctgtttcg cgccactcac ccaacggtga cgacgcaagc
    10801 acaatccccg ctccggcaaa cagacgcacc tgattttccc gcagcttcgc gcagcggatg
    10861 gtcaccaccc attcgccgtt accttcgctg tcacaccaac ccacaatgcc gccaaacagt
    10921 tcgcggtcga acggctccag ttcagcaata acctgagtcg cggcctgatg cgggaaaccg
    10981 ctcagcgcgg gggtcggatg cagcagacag gccagagtca gtgcgttttc ttgcgaattc
    11041 gctttacctt caaagggagt tgcgagatgc cacagcgtcg gcgtggtaat caattgtgga
    11101 gaggagggaa cgtgtaactc actactgcgt tcgcgcagta cctctttcat cgcctgagtc
    11161 accagttcat gttcatggcg atctttttct gacgccagca gacgattacc cgcttcgcga
    11221 tcgagcactt catccggctg acgacgcgcg gaaccggcta acggaatgga gctaaaacgc
    11281 tcgccgtctt tacgtagcag cagttccggg ctggccccca gcaggacgcc accatcagcc
    11341 agcgggacat ggaagttgta actaaccggg ttttgcgcaa tcaaccgttc cagcaatacg
    11401 ccactatcaa tggcggcgtc agtggtgata tcaatcaacc gtgacaacac cactttgtca
    11461 acctgcggcg tggcggtaag tgcggcagcg cgggcaacca tctgttcaaa cgtggtttgt
    11521 tccggaattg cctggcgttc caccacattc agcgactggc tgcgggtgaa acggcgggcg
    11581 gaagcttgtt tttcctgacg ggagaacgac tgccaggatt caggaatata cagcgacgaa
    11641 ggctgacgtg gatcgaaggg aatcgccccg accatcaccg gatttttgat gccctgcact
    11701 ttggcatcgg caaacagcgc ggcgagtttt tgctggaagg gactgtcggg cgaatccccg
    11761 ttcacagccg gttcatcgaa gcgggcgaaa catcctgacg tcgtaaaact gcggtacggc
    11821 gacataaaga aaaagcgatt gggcgcaagt gttgccatgg tctgctgtac ttcctcagcc
    11881 agtgacgtat ccatatcatc ctccacaaaa tgataaaggc tttaataatg attatcattt
    11941 atattttcgg tcgctaacct aaaagcaaac gcgcactatg tcaactcttg aggtaacgca
    12001 atctgcaact cggggttgca tctggttgtg gttacaatga aaatgagaag cattattgat
    12061 ggattcgcat aagcgcaatg tgatgtcctg cgccgttctt ccccctctcc cttccaggga
    12121 gagggctggg gtgagggtca atattcgcac cagtgctggc tgctcccatc accctaaccc
    12181 tctccccaaa ggggcgaggg tacggatagt gcgctttgtc gaatttgtca ttacgccctt
    12241 aaccttatta ataacaggaa gctgatttgt gagactcgcc ccgctctacc gcaacgccct
    12301 tctattaaca ggacttttgc tttccggaat agccgcagtt caggccgccg actggccgcg
    12361 tcagattact gacagccggg gcactcatac cctggaaagc cagccgcagc gtattgtttc
    12421 caccagcgtc accctgaccg gctcactgct ggcgattgat gctccggtga ttgccagcgg
    12481 cgcgaccacg ccaaataacc gcgtcgcgga tgaccagggc tttttacgcc agtggagcaa
    12541 ggtggcgaaa gaacgcaaac tacaacggct ctatatcggc gaaccgagcg ccgaagccgt
    12601 tgccgcgcaa atgccggatc tgattttaat tagcgcaacc ggcggggatt cggcgctggc
    12661 gctgtatgat cagctttcca ccatcgcccc gacattaatc atcaattacg acgacaaaag
    12721 ctggcagtcg ctgttaacgc agcttggcga aattaccggg catgagaaac aagcggcaga
    12781 gcggattgca cagtttgata agcaactggc agcggcgaaa gagcaaatca aattaccgcc
    12841 gcagccggtc actgctattg tctataccgc cgctgcacac agtgccaatc tctggacgcc
    12901 ggaatcagca caagggcaga tgctggaaca actcggcttt acgctggcga aattgcccac
    12961 agggttaaac gccagccaaa gccagggcaa acgccatgac atcattcagc ttagcggaga
    13021 aaatctggct gcagggttaa atggcgagtc actattcctg ttcgccggtg atcagaaaga
    13081 cgccgatgcg atttatgcca atccactgct cgcgcacctg cccgcagtac aaaacaagca
    13141 ggtttatgcg ctgggaaccg agacgttccg cctggattac tacagcgcca tgcaagtgct
    13201 ggaacgactt aaggcgctgt tttaagcatt aactgtcgga cgctgtcacc tgcggcggcg
    13261 tctggcgaaa acgtcgcaac tccaccagca ccagcaataa caacacgccg ataatcaaca
    13321 aaccaaaacc gctcgcgctt gcggaagcaa ccggtgtcat catcgctccc agaccgccta
    13381 acagcgccgc gcctatggca tcgcccgtca cgttttgtgc cgtccacaaa ccgttgattc
    13441 gccctaacat tgcttccggc gtttgcgttt gcagcattgt atattgcagc aacgaactga
    13501 ccgcactcag ccagccgaac agcgccagac aaaccacgcc taaaatccac atcggcatca
    13561 ggccaaataa accaatggcg aggaacgatc ccaacgtgga gagcaacatc aacaatcctg
    13621 gtcgcgcgct atgcgccagt ttcccactgg ttaatgcgcc aatagccgca ccgagcggga
    13681 tcgccgcata gagaaaacca atctctgccg ccgacatctg ccagttgtca gccagcgccg
    13741 gatacagtac ccgcaccgcg ctcgccatcg tcaataaacc acccagcaac gcaatcccgc
    13801 ccaccagcgg gctggcgagc agaaaacgaa atcctgccag taatgatttc aacggatgct
    13861 cgcgcggctg cggtggcggt ggcaacgccg gaaggcttaa caacggtagc aaggtaataa
    13921 acgtgcccgc cgccgccagc ccgtagttcc aggctacgcc accggtcgcc agcaataaac
    13981 cgccaatcat gggcgaaatc accgacccca gacgcacggt caacatggtg atcgccccgg
    14041 cctgcattaa gttttcacgc cctaccagtg ctggtgtcgc cgccaatagc gccgtaacgc
    14101 caagcgatgc gaaaaaacca tcccataaac caagtaaata gattgccagc aatgacggct
    14161 ccggcagcag tgcattaagg cacagtccaa tgaagccaat gccacaggtg ccgcgcgcca
    14221 gcaaaatcac ttttttgcgc tcatagcgat ccgccagcac accgccaacc atcaggccaa
    14281 caaacatcgc gccgccggtc agcgtcaccg aaagccccac cagccaggta gaatgcgtca
    14341 tcatctggat ctgcaccggc accgcgacgc cgagcaaacc cagagacaca attgagataa
    14401 aacgagcgag gaatactgcg cgaaacgccg ggtgcgtttt caacaggctg aggttaagca
    14461 gccaggattg tttattcatt acaatgcctt gccatcaaat attttaaata cctattctta
    14521 ggctgcacat gctaacatat ccaaataaga tcgataacga taattaattt cattatcatg
    14581 gaagttcgta tgtctggttc tgttgccgtg acacgcgcca ttgccgtgcc cggattgctg
    14641 ttattactga ttatcgcgac ggcattaagc ctgctcattg gggcaaaatc actccccgct
    14701 tccgtagtgc tggaggcctt ctccggcacc tgccagagcg ccgactgcac catcgtgctc
    14761 gacgcgcgac tgccgcgcac ccttgccggt ttactggcag gcggcgcgct tggccttgcc
    14821 ggggcgttga tgcaaaccct cacccgaaat ccacttgccg accccggctt gcttggcgtg
    14881 aacgccggag ccagctttgc cattgtgctg ggtgcggcgc tgtttggtta ctcatccgcg
    14941 caggaacaac tggcgatggc cttcgccggg gcgctggtgg cctcattgat tgttgccttt
    15001 accggcagtc agggcggcgg gcagttaagt ccggtgcgtt taaccctggc gggcgtggcg
    15061 ctggcggcag tgctggaagg gctgaccagc ggcatcgccc tgcttaatcc tgacgtctac
    15121 gatcaactgc gtttctggca agccggttcg ctggatattc gcaatctaca taccttaaaa
    15181 gtggtgctga tcccggtgct gatcgccgga gcaaccgcgc tattactgag ccgcgcgctg
    15241 aacagtttaa gcctcggcag cgacaccgcg acggcgctgg gcagtcgcgt ggcgcgcaca
    15301 cagttaattg gtctgctggc gattaccgtg ctttgtggta gtgcgacagc ggtagttggc
    15361 ccgattgcct ttattggcct gatgatgccg catatggcgc gttggctggt gggtgccgat
    15421 catcgctggt cgctgcccgt aacgctgctt gctacccctg ccctgctgct gtttgccgat
    15481 atcatcgggc gggtgattgt gcccggtgaa ctgcgcgttt ctgtggtcag tgcctttatt
    15541 ggtgcaccgg tgctgatctt cctcgtgcga cgtaaaacgc gaggtggtgc atgatttacg
    15601 tctctcgccg attactcatc acctgtttgc tgcttatttc cgcctgtgtg gttgcaggta
    15661 tctggggatt acgcagcggt gccgtcacgc tggaaacctc gcaggtattc gccgcgctga
    15721 tgggcgatgc gccgcgcagt atgacgatgg tggtcaccga atggcgttta ccacgcgtgc
    15781 tgatggcgct gttgattggc gcggcactgg gcgtcagcgg tgcgattttt cagtcgctga
    15841 tgcgtaaccc gctcggcagc cctgacgtaa tgggctttaa caccggggcg tggagcggcg
    15901 tgctggtggc gatggtgctg tttggtcagg acctgacggc tatcgcgctg gcagcaatgg
    15961 tgggcggcat tgtcacttct ctgttggtct ggctgctcgc ctggcgtaac ggtatcgaca
    16021 cctttcggtt gattattatc ggcatcggcg ttcgcgccat gctggtggcc tttaatactt
    16081 ggctgttgct gaaagcgtct ttagaaacgg cgctaacagc gggtttgtgg aatgccggat
    16141 cgctcaatgg cctgacgtgg gcaaaaactt cgccttccgc acccatcatt atattgatgc
    16201 tcattgccgc cgccttgctg gtgcggcgaa tgcgcttgct ggagatgggc gatgataccg
    16261 cctgcgcgct gggcgtcagc gtcgagcgtt cgcgtctgtt aatgatgctg gttgcagtgg
    16321 tgcttaccgc tgcggcaacg gcgcttgccg ggccgatttc ctttattgct ttagtcgcgc
    16381 cgcacattgc ccgacgcatt agcggcaccg ctcgctgggg gctgacccag gcggcgctgt
    16441 gcggagcgct gttactgctg gcggccgatc tctgcgccca acaactgttt atgccgtatc
    16501 aacttccggt tggcgtcgtt accgtcagcc tcggcggtat ttaccttatc gtcttgttaa
    16561 ttcaggagtc tcgcaaaaaa tgaccgaatc agtagcccgt ttgcgcggcg aacagttaac
    16621 cctgggatat ggcaaatata ccgttgcgga aaatctgact gtagaaattc ctgatggtca
    16681 cttcacggca attatcggac caaatggctg tggtaaatcc acgttactgc gtaccttaag
    16741 ccgcctgatg acgcctgctc acgggcatgt ctggctggat ggcgagcaca ttaaacatta
    16801 cgccagtaaa gaagttgcac gccggattgg tctgttggcg caaaatgcta ccacgccggg
    16861 cgatatcacc gtgcaggagc tggtggcgcg tggacgttat ccgcatcaac cgctgtttac
    16921 ccactggcgc aaagaggatg aagaagcggt aacgaaagcg atgcaggcca cgggaataac
    16981 tcatctggca gatcaaagcg tggataccct ttctggcgga caacgccagc gagcgtggat
    17041 cgcgatggtg ctggcccagg aaacggcaat tatgctgctc gacgaaccca cgacctggct
    17101 ggatatcagt catcagattg atctactgga actgttaagc gaactgaacc gcgagaaagg
    17161 ctataccctg gcggcggtac tgcacgatct taatcaggcc tgtcgttacg ccagccattt
    17221 gattgcattg cgggaaggga aaattgttgc tcagggagcg ccgaaggaga ttgtcactgc
    17281 tgaactgatt gagcgcattt atggtctgcg atgcatgatc attgacgatc cggtagccgg
    17341 aacgccgctt gtggtgccgc tcgaacgaac ggcaccttca accgcaaata gttaaactaa
    17401 gtggtctgcc atcatggcat cctgttttct ggatgccatc gcatagcgca ataacacgct
    17461 accacaagcc accatcccgc cgatcagcgc ggaaaggatc acaataatcg ccttacccgg
    17521 accgtctttt ttcactggca atgacgggct taactgatat ttaaacggcg taaaattcac
    17581 atcgttgaca tttgcttttg ttaattgctc gacaagatac tgccgattac gtaattcacc
    17641 gttcagttcc gcaacgtcag taaccgcttt ttcaatttcc agtttgcgtt caataccgtc
    17701 tgcgccgaga gaaatagaga aatcggggtc atctttaacg gcctgaccat tactgtatac
    17761 gggcttttta attcctgccg cgttggcaat gtcgagtgaa taattgaggc gctgaatgtt
    17821 tgcatcaagt tgatttttcg ttttaatgcg atcctgagcc agtttttctt tttcaaactg
    17881 ggttttgatc tccagtttat tacggacgtt ttctatcgac tctttcacca ccaacgcaga
    17941 gatataatcg atatacccgc tcaaaacggt ctgcgcctct ttactggttg gcgcggtaaa
    18001 acttagcgtc caggaggtat acagtgacgg ttcatctttt ttcttactgg cattgtcatc
    18061 aaccgctttc attttttcgc tcaatgcaac aatagcgcga tgcaaatcca gttcatcgat
    18121 tttcgcctct tttaattggt ccatcacata aggtgatgaa cgcaggtact cttccagcaa
    18181 gctaacagac tgaaacttct tgataaacag gttaaatgca ccgccacggt cgatattaac
    18241 atcgagatca agaacgcgga gtttggtaaa ggttttctcc aggtcctgcc actgaatggc
    18301 ttcggcggga gtaataacgg ctgagctggt ccatttttgc ggcaggatga aagagatcag
    18361 taaacctgcg caggcaaatg caaaaacgac cgccatgacc gtttttttgg cccgccataa
    18421 aacttcgatt agattaagta aatcaatttc attactactg ggcgacgcca gaggatactc
    18481 ggaaaaatga gcgtcacttc cctgtttaat attcagtgat gacatgggta taacctgaaa
    18541 atgagtccaa tagggggaaa tctccacggc gctcacttta ccagttggtg agaattatcc
    18601 gaagctgaag tttgtaaatt ccttccactg aatgcaacat tcactctatt taagagaaat
    18661 attcatcaaa cctataaatc aaacaaataa aaaacccata attattttct gtaattatgg
    18721 gtttatagat aatattaatt tacctgttta gcgttgcgcg aataatcggc ccaattttta
    18781 caaacgcccc tggagagata atatccacat gcgcacaatc ctgacgatag atatccagct
    18841 cggcaatcca gggcgaccaa gcgcgttcgg ggctcatacc ttcctgaagc gtgcgttcag
    18901 caacaaacag cgtcgcttta ccatcaaacg gtacgctatg agcagtcgtc agcagacgca
    18961 cagcatcagc gtagttgcct tcaatggtgg taaacaactc cgttgaagta cttccctgct
    19021 gtgccgccag gaaggcctcg cgttcgcggt taatctccgc cagcacttcc gggtccagac
    19081 cattagcctc tttttcctgc cagttttgcg tttctggcgg ccaggtatcc agcaaaccaa
    19141 gaaatgccac ctgttcgcca cgggcacgca gtcgcgccgc aatgccctgc gccagcgtac
    19201 cgccaaggga ataccccagc aggtaataag ggccgtgcgg ttgttgttca agtaacgttg
    19261 ccagatgcgc ttcacagact tcatccagat ttgccgcggt atgcatgggg ccattggggc
    19321 gcggcgactg aatgccgata atcgaccatt gtggatcgat ataacgcgag agcacgctaa
    19381 actgccaggc aaaaccggat gccggatgga aacaaaacag cgtcgggcca ttaccttcac
    19441 gcaacggcag aatggtttcg aatcccatac gccgggtgct gtcttcttca gcatcaataa
    19501 tcgttgccag tttagcgacg gttgacgcga ccatcacttg ccccggcgtc acctggcggg
    19561 caacctgccg acttaactgc gctgccagtt tcattgccag tagcgaatga ccaccaagcg
    19621 caaagaaatc agcatcggca tcctgcacgt cacaacccag caacgacgcg aatgccgcgg
    19681 caataatcgt ttcactgccc gcttttggcg cacgccccgg cgcttgtgcc ttcagttcag
    19741 gcaacggtaa ggctttgcga tccagcttgc cgttggcgct aagaggtaac agtggaagtt
    19801 gcagcagaac cacgggcacc atatgtggtg gcaatgtttc gcgaagctgc gcctgtaatg
    19861 cgctggtatc caacggcaga cctgattgcg acaccagata gcccaccaac tgacgcgcat
    19921 caccaccggt ggctgccgcc tggttaatca cacaggcgtg ggtaacggct tgttcgacat
    19981 ccggcagcgc ctgcatcacg cgatcgattt cgcccagttc aatacgctgc ccgcgaattt
    20041 ttagctgatc gtcactgcgc ccgaggtact ccaccgcgcc gttatccagc cagcgggcaa
    20101 cgtctccggt acggtacatc cgttcaccag ggacaaaagg atcggcaata aagcggctgg
    20161 cggtcagatc gggtcgtcca agatacccct gcgccagttg aatgccggtg agatagagat
    20221 cacccgccac acccggcggc accggatgca tcatcgcatc aagaatacgc agacccgtat
    20281 tccataccgg ataaccaatc ggcacactgc tgccgcgcac ctgtgccagt tcctcgccaa
    20341 aagccggata ccagctgaca tctaccgccg cttccgtcgg gccatataga ttatgcaacg
    20401 gcacgctggt taactgttgc cattcgcggc ataaatcagc cggtaaggcc tcaccactac
    20461 agaaaacctg tttcaacgtc gcgcaactct ggcgagcggt ttgcggcgtc agcgatgcaa
    20521 caaatgctgc cagcatcgac ggcacaaagt gcgtggtcgt tacgccatat tcggcaaaga
    20581 attgctgcat agcgagcggg tcgcggtgcg cttccggttc agccatcacc agtttagccc
    20641 cggcaataaa cggccagaaa aactcccaca ccgagacatc aaaactgcac ggcgtttttt
    20701 gggcaacgac atcttcgcct gtaagcagat aatgattttg catccacaac aggcggttaa
    20761 cgatagccgt ctgcccgacc attacccctt tcggcctgcc ggtggagcca gaggtaaaga
    20821 tgatataagc cgtgtgatgc ggttgtgaaa gttgcagcgg cgcactgccc tgcggtttaa
    20881 gcggggcgtt atagcaaagg ttggttaaat ctggaacatc ggcaaagcgc ggcagttgat
    20941 cgtcggtggt gattaacagc gacggacgcg catcttccag catcattttc aggcgatcgt
    21001 ccggatagcc ggtatccagc ggtagccagg ccgcgccagc ttcaactatc gcatgtagcg
    21061 ccagggtcaa aaagaccgag cgcggtagcg ccaccgccac gctgtcgccc ggtttaacgc
    21121 cacgctcacg cagcagattc gccagcgcca ccacctgctc gcgcatttcc cgatagctga
    21181 actggtaacg cgcatctgcc agcgccggag catccggtgt ttttgccgct tgttctgcca
    21241 ccagcgcgct cagcgtggtt tctggaatct caacctgagt ggcgttgatc tgcgccagct
    21301 gcgcatactc acctggcagc ataatatcga catcgccgca caacagcgcc ggatccgcgg
    21361 cgaactgggc aatcagcatt ttcaggcgtt cagcatgctg gattaacgtt ggctcatcgt
    21421 aacgctgttt attggcgagg atctcaatac tcaaatcacc gtgttcatcc gggaacaggg
    21481 ccagttcaag gtcattaacc ggaccggttg ccaaggtatg ggtttgcgcc tgaacaccag
    21541 gaatatccag ttggtaatca aataccttga tattgagtac cggaccaaac agcggttcat
    21601 cacctgccgc tcgcccgctg tcacggacaa tttgttcggc atcgtaacgt tgatgacgac
    21661 gcattttttt cagttgtgct gccagtcggg ttgccagttc cggcagcgtt tcttgcgccg
    21721 caatgtgaat acccaacggc aaaacgttga gcacgggtcc ggtagccgtc agcgccgccg
    21781 agcccagtcg acgcataaag ataaatccag cggcgtagtc catgcgattg cacaatcgcc
    21841 ccagccacaa agccgtcagc gcaagggcta aatcggtacg ctgcacacct gaaagttgcg
    21901 tagccaactg gcggaattcc ccgtcggtaa attccatttt cagacgtaaa atatctgccg
    21961 aagcgctgcg ccccggtaaa ggtgccggag aaagtgacgc gggcggcggc agttgacgac
    22021 gctgttctgc ccagaatgcc gcatcacgct gccaggcttc gctttcgcgg tattgctggt
    22081 actcttccac tacatcagcg aaaggcgtaa acggcgaagc aggcgttggt tcaccacgca
    22141 gccatgtgca gtaaatattg gcgatctggc gggtaatggc cgggaaactg aagccatcga
    22201 ccagcaaatg gtgataacgc tgataccagt accagcggtt atccgccacc tgtatcagct
    22261 gatgaaagac cagtggttta ccgctatcga cgcgcagatc ttgttgcaaa tccgcctgca
    22321 ttaatgcctg cgcagtaccg tgcggatcaa tgttggttcg caggtcgata atttctggca
    22381 gttcgaacgt cagcgcatca tcgacccact gccagacttc gccgttatct tccgtaaaac
    22441 gcatccgcag cgtatctgct tgcgctagtc cgtcaaccac cgcgcgggcc agtaatggcg
    22501 catcaacctc tccggttaac tcaacgtaat gcgctacgct ccaggcggag ggtaaatccg
    22561 acagtttttc tgccatccag atgccgggct gtgcggcgac caaaggtaaa tgctggctca
    22621 ttgcgcctcc tgcaactggg tgaaattcgc cggtgtcaga gtacgccagt gggcttcaag
    22681 ccactgctgg caggactctt gtgactgcgg ctgacacaca atgtcccagc ctgccggtaa
    22741 ggcgcattgt tgcggccaca gactgaattg cccctgcgca ttgcgcaaaa tgtaaaacgc
    22801 tccctgtgga tcatcgaagg gattactgaa tgccatattc aactcctgtc atggaaaagt
    22861 ggttgccaga ggtcgattag cccctgcatc aagccaccgc gccaacaaag cgcatcatgt
    22921 ccgccgtcaa cctggcgcca gaaaatggat tcttttatgg ggtgtaattg cgcatacagc
    22981 gcctgattgg cccgcataat catcggctcg cgaatacccg cttccagcac aatgcgcaga
    23041 ccttcggcgc taacttcacc agctttaagc ttttcaagta acacgccctc ttgctgcccg
    23101 ccccgatgcg gccaccagta cgatcctgac tggcttaata cacaaccaaa acgttcaggc
    23161 cagtgcagtc cggcatacag cgcggaaagt ccaccaaaac tctgcccggc aaccacggtg
    23221 cgatcggcgc gatcgctaaa aggggcaata gctttcacca ggggtaataa ctcttgctgt
    23281 actgcgagcc agaaatccgc attacacggc agttcgtgag cgcggtgcgt ggtgtcgata
    23341 gcgtcgatca acacatacac ggcgggagga agttgctgac gatgggtcag cgaagtcagc
    23401 actggccaga cgggcatact ttgcgcccaa aattcgccat cgagcaaaac tgccagcggg
    23461 cgttcttctg ctgttgcatc gccggtggta aaaatccata cacgacgtga atttttcaac
    23521 cgttcacttt tccagataat ttctttggct ggtatttctg gcgcttgcgg acaatcccat
    23581 cccggttgca gaggcgcttg cggcatttcg agtgcagaaa cagcgtgccc tcgcccgcct
    23641 ttccagcttt gtggattcag cggatcggct attgcctggg gtaatagttt tcgccagcct
    23701 tcacgtaatt cgaggcgatc gggggatggt gcagaaaaaa tgtcatcgcg ttcggtggga
    23761 ataaagcagt agctgccgcg ccagttggca ttgagttgtg tcgtccactg ccagacatca
    23821 gtacctgcaa tgcgctgcat cgactggggc tggctgttct gatgatgatc ggtcacacca
    23881 gtgatgtaga cccatacgcg ctttatcggc gagtattctt cagaaccttg gggatcacgc
    23941 caccagaaag tgacctcaaa catttcgtca ttcagacgct gccattccgg gccatgtttc
    24001 gactgccacc agctctcact tcctactttt aacgccgtca caccataacc ccatgtttac
    24061 tgtgcaattt ttcattgatt gcagaaatat attgataata ttattgataa ctatttgcat
    24121 ttgcaatagc gtaatggcgc gccgtgggaa gcgcggacat taattaacca actgcactgc
    24181 gtgtctttca ggatcaaagg ttttcgcggt agcgggatgc gtcgtgttga ggacgaccat
    24241 gcccgacagt tgcaattcgt ggcaaaaatg caggaataaa acaatgaaca agaagattca
    24301 ttccctggcc ttgttggtca atctggggat ttatggggta gcgcaggcac aagagccgac
    24361 cgatactcct gtttcacatg acgataccat tgtcgttacc gccgccgagc agaacttgca
    24421 ggcacctggc gtttcgacca tcaccgcaga tgaaatccgc aaaaacccgg ttgcccgcga
    24481 tgtgtcggag atcatccgta ccatgccagg cgttaacctg accggtaact ccaccagtgg
    24541 tcagcgtggg aataaccgac agattgatat tcgcggtatg ggtccggaaa acacgctgat
    24601 tttaattgac ggcaaaccgg tcagcagccg taactcggtg cgtcagggct ggcgtggcga
    24661 gcgcgatacc cgtggtgata cttcctgggt gccgcctgaa atgattgaac gtattgaagt
    24721 tctgcgtggt ccggctgcag cgcgttatgg caacggcgcg gcgggtggcg tagttaacat
    24781 cattaccaaa aaaggcagcg gtgagtggca cggttcctgg gacgcttatt tcaatgcgcc
    24841 agaacataaa gaggaaggtg ccactaaacg caccaacttc agtctgaccg gcccgctggg
    24901 cgacgaattc agcttccgct tgtatggcaa cctcgacaaa acccaggctg acgcgtggga
    24961 tatcaaccag ggccatcagt ccgcgcgtgc cggaacgtat gccacgacgt taccagccgg
    25021 gcgcgaaggg gtgatcaaca aagatattaa tggcgtggtg cgctgggact tcgcgcctct
    25081 gcaatcactc gaactggaag cgggttacag ccgccagggt aacctgtatg cgggcgatac
    25141 ccagaacacc aactctgacg cttacactcg ctcgaaatat ggcgatgaaa ccaaccgcct
    25201 gtatcgccag aactactcgc tgacctggaa cggtggctgg gataacggag tgaccaccag
    25261 caactgggtg cagtatgaac acacccgtaa ctcgcgtatt ccggaaggtc tggcgggcgg
    25321 taccgaaggg aaatttaacg aaaaagcgac acaggatttc gtcgatatcg atcttgatga
    25381 cgtgatgctg cacagcgaag ttaacctgcc gattgatttc ctcgttaacc aaacgctgac
    25441 gctgggtacg gagtggaatc agcaacggat gaaggacttg agttccaata cccaggcgct
    25501 gaccggggcg aacaccggcg gcgctattga tggtgtgagt gccaccgacc gtagcccgta
    25561 ttcaaaagca gaaattttct cgctatttgc cgaaaacaac atggagctga ctgacagcac
    25621 catcgtaacg ccggggctgc gtttcgatca tcacagtatt gtcggcaata actggagccc
    25681 ggcgctgaac atatcgcaag gtttaggcga tgacttcacg ctgaaaatgg gcattgcccg
    25741 cgcctataaa gcgccgagcc tgtaccagac taacccgaac tacattctct acagtaaagg
    25801 tcagggctgc tatgccagcg cgggcggctg ctatctgcaa ggtaacgatg acctgaaagc
    25861 agaaaccagc atcaacaaag agattggtct ggagttcaaa cgcgacggct ggctggcggg
    25921 cgtcacctgg ttccgtaacg attatcgcaa taagattgaa gcgggctatg tggctgtagg
    25981 gcaaaacgca gtcggcaccg atctctatca gtgggataac gtgccgaaag cagtggttga
    26041 aggtctggaa ggatcgttaa acgtaccagt tagcgaaacg gtgatgtgga ccaataacat
    26101 cacttatatg ctgaagagtg aaaacaaaac cacgggcgac cgtttgtcga tcatcccgga
    26161 gtacacgttg aactcaacgc tgagctggca ggcgcgggaa gatttgtcga tgcaaacgac
    26221 cttcacctgg tacggtaagc agcagccgaa aaaatacaac tacaaaggtc agccagcggt
    26281 tggcccggaa accaaagaaa tcagtcctta cagcattgtg ggtctgagcg cgaccaggga
    26341 tgtgacgaag aatgtcagtc tgaccggcgg cgtggacaac ctgttcgaca aacgtttgtg
    26401 gcgtgcgggt aatgcccaga ccacgggcga tctggcaggg gccaactata tcgcgggtgc
    26461 cggggcgtat acctataacg agccgggacg tacgtggtac atgagcgtaa acactcactt
    26521 ctgatgctaa cgtcagattg ttgataaagt gcgcgtcgtt catgccggat gcggcgtgaa
    26581 cgccttatcc ggcctacaaa aatcttgcca attcaatata ttgcaggacc atgtaggcct
    26641 gataagcgta gcgcatcagg cagtttagcg tttgtcacca gtctctaata tggtcgacat
    26701 gaaaactacg catacctccc tcccctttgc cggacatacg ctgcattttg ttgagttcga
    26761 tccggcgaat ttttgtgagc aggatttact ctggctgccg cattacgcgc aactacaaca
    26821 cgctggacgg aagcgcaaag ccgaacattt agccgggcgg atcgctgcaa tttatgcgct
    26881 gcgggaatat ggctataaat gtgtgcccgc aatcggcgag ctacgccaac cggtgtggcc
    26941 tgcggaggta tacggcagta ttagccactg cggggctacg gcattggccg tggtttcccg
    27001 tcaaccgatt ggcgttgata tcgaagaaat tttttctgcg caaacagcga ccgaattgac
    27061 agacaacatt attacaccag cagaacacga gcgactcgca gactgcggtt tagccttttc
    27121 tctggcgctg acactggcat tttccgccaa agagagcgca tttaaggcaa gtgagatcca
    27181 aactgatgca ggttttctgg actatcagat aattagctgg aataaacagc aggtcatcat
    27241 tcatcgtgag aatgagatgt ttgctgtgca ctggcagata aaagaaaaaa tagtcataac
    27301 tctgtgccaa cacgattaat tgacaacatc tggtacgatt cgcccgcagc catcactgac
    27361 cgcgggcgaa agtgtaaagc aggtgcctta ccatcctgac ctgacaaccg gatatgcggg
    27421 gattgctccc cgcacaacgg ctacttcttc ggttcgtaag cgagaacagc cttaaactca
    27481 atattacgtt cctttacggt gaactcacac agcgaatccc cgaccagaag cgtaaatccc
    27541 agcaccgtta aacacagcac tatgactgcc gcaagggcat atttcgtcag catgtttata
    27601 ttgcctccat gcgaagaagg gactaccatc caaattgttc aggtttgggt aggtagcccc
    27661 agggttgata gaaatatcgt cctggggctt catctttcca gacctcagag taaacctgaa
    27721 accggaaagc ttcaggcacc cgcagttatc ttacccttgc ttagcaaaat agctgtttat
    27781 ttatacagta agtcctgttt cggacttctc actccccatt tgatcaactg aagctgaacc
    27841 cgtttttttc tgcatgcctc aatcgtcaaa attcttcgcc acagtcagca ctgccataac
    27901 ttgtcacatt gcaaaagtag ccaaattgct tctgtcataa tcagttcacc atcaccaaaa
    27961 aaaagaaaca ttccagaact tccgcatctc gcccagccgc tcccacttct atactgaata
    28021 gaaaacgcca acataagaga aacctatgcc attacccgat tttcatgttt ctgaaccttt
    28081 tacactcggt attgaactgg aaatgctggt ggttaatccg ccgggctatg acttaagcca
    28141 ggactcttca atactgattg acgcggttaa aaataagatc acggccggag aggtaaagca
    28201 cgatatcacc gaaagtatgc tggagctggc gacggatgtt tgccgtgata tcaaccaggc
    28261 tgccgggcaa ttttcagcga tgcagaaagt cgtattgcag gcagccgcag accatcatct
    28321 ggaaatttgc ggcggtggca cacacccgtt tcagaaatgg cagcgacagg aggtatgcga
    28381 taacgagcgc tatcaacgaa cgctggaaaa ctttggttat ctcattcaac aggtgaccgt
    28441 ttttggtcag catgttcatg ttggctgcgc cagtggcgat gacgccattt atttgctgca
    28501 cggcctgtca cggtttgtgc cgcacttcat cgccctttcc gccgcgtcgc catatatgca
    28561 aggaacggat acgcgttttg cctcctcacg accgaatatt ttttccgcct ttcctgataa
    28621 tggcccgatg ccgtgggtca gtaactggca acaatttgaa gccctgtttc gctgtctgag
    28681 ttacaccacg atgatcgaca gcattaaaga tctgcactgg gatattcgcc ccagtcctca
    28741 ttttggcacg gtggaggttc gggtgatgga taccccgtta acccttagcc acgcggtaaa
    28801 tatggcggga ttaattcagg ctaccgccca ctggttactg acagaacgcc cgttcaaaca
    28861 tcaggagaaa gattacctgc tgtataaatt caaccgtttc caggcctgtc gctatgggct
    28921 ggaaggcgtc attaccgatc cgcacactgg cgatcgtcga ccgctaacgg aagacacctt
    28981 gcgattgctg gaaaaaatcg ccccttccgc acataaaatt ggtgcatcga gcgcgattga
    29041 ggccctgcat cgccaggtcg tcagcggtct gaatgaagcg cagctgatgc gcgatttcgt
    29101 cgccgatggt ggctcgctga ttgggctggt gaaaaagcat tgtgagatct gggccggtga
    29161 ctaagtaggg aattgcctta cagaagaata tccctgacaa tggtgtttta acttacattt
    29221 aacaatgtta tgaaacaccc tttagaaacc ttgactaccg cagcaggcat tttgctgatg
    29281 gctttcctct cttgcctgct gctgcccgcc cccgcactgg ggctgacgct ggcacaaaaa
    29341 ctggtgacca tgttccatct gatggatctt agccagcttt acactttatt gttttgtctg
    29401 tggtttttag tgctgggcgc tattgagtat tttgttctgc gctttatctg gcgacgctgg
    29461 ttctcgctgg cggattaaac gtcgattatc gccgtacttc gcggcatact ttgcttattc
    29521 tccttcgcct aaaggaacgt ttatggataa gcaatcactg cacgaaacgg cgaaacgcct
    29581 ggcccttgag ttaccctttg tcgagctttg ctggcctttt ggcccggagt tcgatgtttt
    29641 taaaattggc ggcaaaattt ttatgctgtc gtcggagctg cgcggcgtcc cctttatcaa
    29701 tctgaagtcc gatccacaaa aatccctgtt aaatcagcag atatacccga gcattaagcc
    29761 agggtatcac atgaataaaa agcactggat ttcggtgtat cccggcgagg aaatctccga
    29821 agcgttactt cgcgatctga tcaacgattc gtggaatctg gtggttgatg gtctggctaa
    29881 acgcgatcaa aaaagagtgc gtccaggcta aagcggaaat ctatagcgca tttttctcgc
    29941 ttaccatttc tcgttgaacc ttgtaatctg ctggcacgca aaattacttt cacatggagt
    30001 ctttatggat atcatttctg tcgccttaaa gcgtcattcc actaaggcat ttgatgccag
    30061 taaaaaactt accccggaac aggccgagca gatcaaaact ctcctgcaat acagcccatc
    30121 cagcaccaac tcccagccgt ggcattttat tgttgccagc acggaagaag gtaaagcgcg
    30181 tgttgccaaa tccgctgccg gtaattatgt gttcaacgaa cgtaaaatac ttgatgcctc
    30241 gcacgtcgtg gtgttctgtg caaaaaccgc gatggacgat gcctggctga agctggttgt
    30301 tgaccaggaa gatgctgatg gccgctttgc cacgccggaa gcgaaagccg cgaacgataa
    30361 aggtcgcaag ttcttcgctg atatgcaccg taaagatctg catgatgatg cagagtggat
    30421 ggcaaaacag gtttatctca acgtcggtaa cttcctgctc ggcgtggcgg ctctgggtct
    30481 ggacgcggta cccatcgaag gttttgacgc cgccatcctc gatgcagaat ttggtctgaa
    30541 agagaaaggc tacaccagtc tggtggttgt tccggtaggt catcacagcg ttgaagattt
    30601 taacgctacg ctgcgaaatc tcgtctgccg caaaacatca ccttaaccga agtgtaattc
    30661 tctcttgccg ggcatctgcc cggctatttc ccctcagatt ctcctgattt gcataaccct
    30721 gtttcagccg tcatcatagg ctgctgttgt ataaaggaga cgttatgcag gatttaatat
    30781 cccaggttgg ggatttagcg ggtattgaga tcgatcacac cacctcgatg gtgatgattt
    30841 tcggtattat ttttctgacc gccgtcgtgg tgcatattat tttgcattgg gtggtactgc
    30901 ggaccttcga aaaacgtgcc atcgccagtt cacggctttg gttgcaaatc attacccaga
    30961 ataaactctt ccaccgttta gcttttaccc tgcaggggat tatcgtcaat attcaggcgg
    31021 tattctggct gcaaaaaggc accgaagcgg cagatattct gactacctgc gcgcagttgt
    31081 ggatcatgat gtatgcgctg ctttcagtct tctcgttgct ggatgttatt ttgaatctgg
    31141 cgcagaaatt cccggcggca tctcagttac cgctgaaagg gatatttcag gggattaaac
    31201 tgatcggcgc aatcctggtc ggcattttga tgatctcgct gctgattggt cagtcgccag
    31261 cgattctgat cagcggtctt ggtgcaatgg ctgccgtgct gatgttggta tttaaagatc
    31321 cgattcttgg tctggtggca ggtattcagc tttccgcgaa cgatatgctg aaactgggcg
    31381 actggctgga gatgccgaaa tacggcgcgg atggcacggt gatcgatatt gggttaacca
    31441 ccgtcaaagt gcgtaactgg gacaatacca ttaccactat tcccacctgg tctctggttt
    31501 ctgactcctt taaaaactgg agcgggatgt cagcatctgg cgggcgacgt attaagcgca
    31561 gtatcagtat tgatgtcacc agtattcgtt ttcttgatga agacgaaatg caacgtctga
    31621 ataaagcgca cttgttaaaa ccttatttaa ccagccgcca tcaggaaatt aatgagtgga
    31681 atcgccagca aggttctacg gagtcgatat taaacctgcg ccgaatgacc aatattggaa
    31741 cctttcgtgc ctatctgaac gaatatctgc gtaaccatcc gcggattcgt aaagatatga
    31801 ccttaatggt acgccaactg gctccaggtg ataacggttt accgctcgag atctacgcgt
    31861 ttaccaacac cgtggtgtgg ctggaatatg aaagcattca ggctgatata ttcgatcaca
    31921 tatttgcgat tgtcgaagag tttggtctgc gacttcatca gtcgccagcc ggcaatgata
    31981 ttcgctctct ggcgggtgca tttaagcagt aattaaaaaa accgctctca tcgaatggat
    32041 gagagcggac atcgttttgt cggatgtagc gtgaatgcct tatttccgac gcagcgtttt
    32101 aaatgccaca aacaggaata caatccacac cggcagcagg atcgctgaca agcgcatatc
    32161 atccatcgtg cacatcagca gcaaaatcat gccgaggaag gcaatgcaaa gatagttgcc
    32221 gaacggataa agcagcgcct taaactgtgt ttcacgtccc tgacgtcgca tcgccgcgcg
    32281 aaaacgcaga tgcgccaggc agatcataat ccagttcaac agcagcgttg ctaccaccag
    32341 cgccatcagc agaccaaacg ctttttgcgg cagcagatag ttgattaaca ccaccagcga
    32401 agtgatcgct ccggaaagca tcagcgagtt aatcggcacg ccgcgatggc tgacgcgagt
    32461 caaaaacttc ggcgcattac cctgcacaga aaggccaaac agcatgcggc tgttagagta
    32521 aaccccgctg ttatacactg acagcgatgc taccagaatg acgaagttca gcgcagaagc
    32581 tacctcgttg ctgtcgagat tatggaaaat catcacaaac gggctactgt tggatttcac
    32641 ttccacccac ggatagagcg ccagtaaaac caccagtgaa cagatgtaaa acagcaggat
    32701 gcgatacacc acctgattta ccgcttttgg aatgcttttt tccggatcgc gcgcttcagc
    32761 ggcagtaatc ccaatcagct ccagaccgcc gaaggagaac ataattaccg ccagcgacaa
    32821 aatcagccca ttccagccgg tggcgaagaa accaccgtag cgccagaggt tgtcgatact
    32881 ggctttctcg ccgccgtgac cagaaaacag cagccacagg ccaaagccga tcataccgat
    32941 gattgccagc actttaatca acgcaaacca gaactcggtt tcgccatata agcgcacgtt
    33001 caccaggtta acggcgttga tgataataaa gaaggcggca gcccaaatcc acgttggaac
    33061 atccgggaac cagtactgca tatagatgcc cgcagcggtc agctctgcca ttcccaccag
    33121 cacgaacatt acccagtagt tccagccaga gaggaagccc gcaaacggtc cccagtattt
    33181 ataggcaaag tgggcaaatg aaccggatac cggctcttcg accaccatct cgccgagctg
    33241 gcgcataatc aggaaagcga tgatcccggc gacgccgtag cccagcaata cagccggacc
    33301 cgccatctga atcgccgggc caatgccaag aaacagacca gtaccaattg cgccacccag
    33361 cgcaatcagt tgaatatgac ggttatgtaa tccgcgatga agcgtcggct cttgatttga
    33421 cgcagtatct tccgatacgg ttgacgcgtt tttcacgcct ttcccctgtg tgtctttttt
    33481 gttgaggggc accttttaac atttagtgcc catcgtcgca agacacaatc cacacggtta
    33541 aacggggtat cctgctttta tttccgtacc cgatgtcggt gcagccacat cagcttatac
    33601 gccgccggga taataaacag cgacagcaaa ggcgcggtga tcatgccgcc aatcatcggt
    33661 gcggcaatcc ggctcatcac ctctgaacca gcccccgttc cccacagaat cggcagcaga
    33721 ccggcgataa tcaccgccac cgtcatcgct ttcgggcgca cgcgcagtac cgcgccgtga
    33781 tacaacgcct catccagctt ctgctcactg aatgtttgcg gattattcaa cgacggctcg
    33841 gcctctatgg cgtgacgtaa atacatcagc atcaccacgc caaattcggc ggcgcccccg
    33901 gcaagggcaa taaaaccggt gcccgttgcc acagaaagat gaaagcccat ccaccacagc
    33961 aaccagatgc cgcccaccag cgcaaacggt acgctgctga taatcagcaa cgcttcgccc
    34021 acccgacgga atgccagata caacagcacg aagatgatca tcagtgtcat cggcaccatg
    34081 agtttcagct tatggttggc gcgctccagt agctcgaact gcccggagaa tgccacgctg
    34141 gtgcccggtt ttaactgcac tttttcaact atcgcttttt gcaaatcgtg aaccaccgac
    34201 accatgtcac gatcgcgggc atcgatataa atccagctcg tcgggcgcgc attctcggtt
    34261 ttcagcatcg acggtccggt agagacttta acgtcggcca cgtctgccag ggtgatttgc
    34321 tgcttcatcg gcgtcaggat cggtagctgg cgcagtgcct gcgggctatc gcgccagctt
    34381 tgcggataac gcagattaat gggataacgg gcaatccctt ccaccgtttc gccaaccatc
    34441 gccccgccca ccgcagaagt cacaaacaac tgcacatccg ccaccgtcat accgtaacgc
    34501 gcggcttttt cacggttaat ctcaacgttg atatagcgcc caccttccag acgctcggca
    34561 agcgcagaag ccacgcctgg caccgttcgc gctacttctt caatttgctc agccatcgcg
    34621 tcgatatccg ccagcacagt gccggaaact ttaatgccga tggggctttt aatgccggtt
    34681 gagagcatat cgatacggtt acgaattggc ggcacccaca gattcgccag ccccggcagc
    34741 cgcacggtgt tatccagttc ctcaatgatt ttgtccatcg tcatgccagg ccgccactga
    34801 tcctgcggct taagctggat ggtcgtttca accatctcga gcggagcaga atcggtggcg
    34861 gtttccgctt tcccggtttt gccaaatacc cgcgccactt caggtacgct cataattagc
    34921 ttgtcgtttt tttgcagcat actcgccgcc tctgctgcgg aaatccccgg cagcgtcgat
    34981 ggcatataca acaagtcgcc ttcattgatc tgcggtaaaa attccccgcc aactttattg
    35041 agcggccaga gaaccgtcag caccgaaagc gctgccacca acagcgtggt tttcggccag
    35101 tgcagtactt tcagcaatag aggatgataa acacgaatca aaaagcgatt gagcgggtta
    35161 ctgctttccg gcggaatttt gccacggatc cagtaaccca tcaggatcgg gatcactacg
    35221 atcgccagca gcgccgcacc cgccatcgca tacgttttgg tgaacgccag cgggccaaac
    35281 agacgccctt cttgcccttc cagggtgaag attgggataa acgacagcgt gataatcagc
    35341 agactgataa acagcgccgg ccccacttca acagatgcat cggtaatcac ctgccagcgc
    35401 gttttattat ccagcgtggc gtcaggatgc tggtgctgcc actcttccag ccgtttatgc
    35461 gcattctcga tcatgacgat agcagcatcg accatcgccc cgacggcaat cgcaatgcca
    35521 cccaacgaca taatattggc attcagtccc tggaagggca tgacaataaa agcaatacac
    35581 aaccccagcg gcaacgaaat aatcgccacc agcgccgagc gcacatgcca gagaaacagc
    35641 gcacagacta ccgccaccac aataaactct tccagcaact tgccgctgag gttgtcgatg
    35701 gcgcggtcaa tgagctggct gcgatcgtat gttgtaacta tctccacgcc ttccggcaga
    35761 ctacttttca gcgtttccag tttgtccttc acggcggcga tcacttctcg ggcgtttttg
    35821 ccggagcgca ggatcaccac cccgcccgcc acttcgcctt cgccgttcag ttcggcaatg
    35881 ccccggcgca tctccgggcc aacctggacc ttcgcaacat cgcgcagata aacgggcacg
    35941 ccattttcac tggcttttaa aacgatgtga ttaaagtcgt cgagcgtttg cagatagccg
    36001 ctggcgcgca ccatatattc cgcttccgcc agttcgatcg acgaaccgcc cgcttcctgg
    36061 tttgaagcat ccagcgcgct ttttacttcg gcgagactga tgccatactg cgccaggcgc
    36121 tggggatcga taaccacctg atactctttc accacaccgc ccaccgacgc cacttccgca
    36181 acgtcaggga tggttttcag ctcatatttg agaaaccagt cctgtaatga gcgtaaatcg
    36241 gccagatcgt gcttaccgct gcgatccacc agtgcatatt catagatcca gccaacaccc
    36301 gtggcatctg gccccagctc ggcgctgact cccgcaggca gcttaccctg tacctggttg
    36361 aggtactcca gcacccgcga acgcgcccag tacggatcgg taccatcttc gaaaatgaca
    36421 tacacataag agtcgccaaa ctgcgagaaa ccacgcacag tcttcgcgcc aggcaccgac
    36481 aacatggtgg tggttagcgg ataagtcacc tgattttcaa cgatttgcgg tgcctgcccg
    36541 ggatagctgg ttttaataat cacctgcaca tcggagagat ccggcagcgc atccactggc
    36601 gtattaatga tggtccaggt gccccagatg ctaagaaaca acgcgcccat cagcaccaaa
    36661 aaacggttcg ccaccgagcg acgaataatc cattcaatca ttggttattc cctcaatgcg
    36721 catgggtagc actttcagag cgcatccgct ccagtgcgcc agaaatattg gcttcggaat
    36781 caatcaggaa aaggccgctg gaaaccacct tttcaccttc cgccagacca gagcgtaatg
    36841 cggtgacacc ttgcgatgcc tggaaaacgg caacgcgttt cggtacaaag cgcccgtcgg
    36901 catcaatggt aatcacccgc tgttcgctac cggtatcaat cagcccttgt gacggaatga
    36961 gcagcatcgg ttcgctggcg gtattgagtt gcaaccaggc gttcatgccc ggttttagcg
    37021 cctcgtcggc gttgtcgact tccagacgca gctgcagcgt gcgggtcgcg gcatccacgc
    37081 cgggtagcag cgtccatttg cggatggtga gtgttttatc cggtcgtgcc ggaacggtga
    37141 gcgtaaactg cgaggcatct ttcaccagcc aagcgataga ctccgggatc gcagcagtga
    37201 cccacaccgg gtccataccc tgaattttcg ctaccacgtt atctttggcg atattcattc
    37261 ccgcgcgcag atcaaacgcg gtgatcacgc catcaatggg cgctttgagc gtaaagcgag
    37321 tctggatttt ttgcgtggcg atcaggcggc gaatatccgc ctccggcatt cccgccagtc
    37381 gcagccgctc aagaatgcct tcagtctggg tcgccgtacc gccggtttcg cgcagcagta
    37441 aatactcact ctgcgcttcc acccagtcag gaatggtcag gtcgagaagc ggtgtgccct
    37501 tttgtacttt atcgcccacg gtaagcggat acaccttgtc gataaacccg gcagcgcgag
    37561 cctgcacaat ggcatactga tactcgttgt aactgacatt cgccgggaaa ctctgggcaa
    37621 aagtcagcgg tccgcgcgtg acggtagccg ttttcacccc cagattctgc gtctgagtcg
    37681 ggtcaatgcg cacaccagac gcagaactct cttcatcggc atatttcggc accagatcca
    37741 tatccataaa cggcgattta cctggtttat cgaaccgcgt attggggtac atcgggtcgt
    37801 accagaataa gattttacgt
//
LOCUS       DADMJE010000018        37233 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.018, whole genome shotgun sequence.
ACCESSION   DADMJE010000018 DADMJE010000000
VERSION     DADMJE010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 37233)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 37233)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..37233
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.018"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..808)
                     /locus_tag="JN001_000841"
     CDS             complement(<1..808)
                     /locus_tag="JN001_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antA/AntB antirepressor family protein"
                     /protein_id="HAY9052156.1"
                     /translation="MTIEKSRFSSGAAPQPNVNTGVINGNDFAAIVPVIAGRIGGREA
                     NIVSAKALHKALGVGRDFTNWIKGRIDQYGFIAGTDFIRVENLSTPKRASAKTRQQIE
                     HDYLLSLDMAKEVAMVERNEQGRAIRRYFIQCEEELQRSVPEIAARYRRQLKARLSAA
                     NNFKPMCDALNMARAEMGKTTQQRHYSNESNMIARIVLGGMTAKQWAQANGITGEPRD
                     SMNAAQLEHLAYLESTNITLIDMGMEYEQRKGELTRLSQRWLAKRLEVNHA"
     gene            complement(822..1253)
                     /locus_tag="JN001_000842"
     CDS             complement(822..1253)
                     /locus_tag="JN001_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052157.1"
                     /translation="MEKKNRPLQAANSDIRVSDVTPLTKSLQAPKRTPKKHRARVYML
                     RTGIEGWTENDILRYCRLSSGRNYASELERRLDIQLERIDEKNPDGIGSHLRYRFTGR
                     GDVLKVIRLVNHNADAGGYQGLSQPEIADILNLYPDNLTAA"
     gene            complement(1253..1456)
                     /locus_tag="JN001_000843"
     CDS             complement(1253..1456)
                     /locus_tag="JN001_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001018038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlpA family phage regulatory protein"
                     /protein_id="HAY9052158.1"
                     /translation="MNIDTIPTKGYIRRFRLAELLGVSVSTIDRKVRNGSLPRPVKLG
                     EKITAFDAVEIHNWLAERRGKVA"
     gene            complement(1569..2417)
                     /locus_tag="JN001_000844"
     CDS             complement(1569..2417)
                     /locus_tag="JN001_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000735989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052159.1"
                     /translation="MKKLPPAPFFRLNRAAELLEIDIDDLLIMAAAESIYLSAYLCGY
                     DGTLHSIASLYRNCSLFPDVKEDCLLLADIITEVEDEKSFKAGVVNHIDCHVLGLWHV
                     NASYILDIAGLDSIDTPARIFSPAHRKRELDVSANYYFFLDYTKHAFHEISVEDLYIT
                     RPWVEYIGECMDKNQPIYSPETRINLQALYEDVKNVEHGNRERHRQKREICLLALIYV
                     KRHYPEECKGKNGKETNEAWANATINHWALLGGGYDEPSIDYLKKLIADADRTPEERT
                     TAGKKR"
     gene            complement(2513..3772)
                     /locus_tag="JN001_000845"
     CDS             complement(2513..3772)
                     /locus_tag="JN001_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014639344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9052160.1"
                     /translation="MPKLTDMQIRAWIKSGERFEGRADGNGLYLRYREADKTPTWRFR
                     YKLAGKSRAMLIGSYSELSLSKARETAKELSARVALGYDVAGEKQKRKTEALAKMEAE
                     KNAMRVSELAAEYFERQILPRWKHPDILRRRIDKDINPCIGSMKVEDVKPRHIDDMLK
                     GIVDRGAPTIATDVLRWTRRIFDYGIKRHALEINPCSAFEVADAGGKEAARDRWLTRD
                     ELIQLFKAMRTAKGFSRQNEITFKLLLALCVRKMELCAARWEEFDLDGAVWHLPEERS
                     KNGDPIDIPLPSPAVEWLRELHTFSCNSAWVLPARKMQNRMIPHIQESTLPVALAKVR
                     AEMPDVPNFTIHDFRRTARTHLAALGVDPVVAERCLNHRIKGVEGIYNRHQYFDERKA
                     ALAQWADLLVALESGKDYNVTPLRRAN"
     gene            complement(3963..4826)
                     /locus_tag="JN001_000846"
     CDS             complement(3963..4826)
                     /locus_tag="JN001_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HAY9052161.1"
                     /translation="MIRSMTAYARREIKGEWGSATWEMRSVNQRYLETYFRLPEQFRS
                     LEPVVRERIRSRLTRGKVECTLRYEPDISAQGELILNEKLAKQLVTAANWVKMQSDEG
                     EINPVDILRWPGVMAAQEQDLDAIAAEILAALDGTLDDFIVARETEGQALKALIEQRL
                     EGVTAEVVKVRAHMPEILQWQRERLVAKLEDAQVQLENNRLEQELVLLAQRIDVAEEL
                     DRLEAHVKETYNILKKKEAVGRRLDFMMQEFNRESNTLASKSINAEVTNSAIELKVLI
                     EQMREQIQNIE"
     gene            4953..5669
                     /gene="rph"
                     /locus_tag="JN001_000847"
     CDS             4953..5669
                     /gene="rph"
                     /locus_tag="JN001_000847"
                     /EC_number="2.7.7.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006803115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HAY9052162.1"
                     /translation="MRPAGRSNNQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIE
                     EGVPRFLKGQGQGWITAEYGMLPRSTHTRNAREAAKGKQGGRTMEIQRLIARALRAAV
                     DLKALGEFTITLDCDVLQADGGTRTASITGACVALADALQKLVENGKLKTNPMKGMVA
                     AVSVGIVNGEAVCDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFTHEELLTLL
                     ALARGGIESIVATQKAALAN"
     gene            5735..6376
                     /gene="pyrE"
                     /locus_tag="JN001_000848"
     CDS             5735..6376
                     /gene="pyrE"
                     /locus_tag="JN001_000848"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HAY9052163.1"
                     /translation="MKPYQRQFIEFALGKQVLKFGEFTLKSGRKSPYFFNAGLFNTGR
                     DLALLGRFYAEALVDSGLEFDLLFGPAYKGIPIATTTAVALAEHHDLDLPYCFNRKEA
                     KDHGEGGNLVGSALQGRVMLVDDVITAGTAIRESMEIIQANGATLAGVLISLDRQERG
                     RGEISAIQEVERDYNCKVISIITLKDLIAYLEEKPEMAEHLAAVKAYREEFGV"
     gene            complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="JN001_000849"
     CDS             complement(6413..7009)
                     /gene="slmA"
                     /locus_tag="JN001_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000818604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion factor SlmA"
                     /protein_id="HAY9052164.1"
                     /translation="MAEKQTAKRNRREEILQSLALMLESSDGSQRITTAKLAASVGVS
                     EAALYRHFPSKTRMFDSLIEFIEDSLITRINLILKDEKDTTARLRLIVLLLLGFGERN
                     PGLTRILTGHALMFEQDRLQGRINQLFERIEAQLRQVLREKRMREGEGYTTDETLLAS
                     QILAFCEGMLSRFVRSEFKYRPTDDFDARWPLIAAQLQ"
     gene            complement(7116..7574)
                     /gene="dut"
                     /locus_tag="JN001_000850"
     CDS             complement(7116..7574)
                     /gene="dut"
                     /locus_tag="JN001_000850"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000976070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HAY9052165.1"
                     /translation="MMKKIDVKILDPRVGKEFPLPTYATSGSAGLDLRACLDDAVELA
                     PGDTTLVPTGLAIHIADPSLAAMMLPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISVW
                     NRGQDSFTIQPGERIAQMIFVPVVQAEFNLVEDFDATDRGEGGFGHSGRQ"
     gene            complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="JN001_000851"
     CDS             complement(7552..8772)
                     /gene="coaBC"
                     /locus_tag="JN001_000851"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418096.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HAY9052166.1"
                     /translation="MSLAGKKIVLGVSGGIAAYKTPELVRRLRDRGADVRVAMTEAAK
                     AFITPLSLQAVSGYPVSDSLLDPAAEAAMGHIELGKWADLVILAPATADLIARVAAGM
                     ANDLVSTICLATPAPVAVLPAMNQQMYRAAATQHNLEGLASRGLLIWGPDSGSQACGD
                     IGPGRMLDPLTIVDMAVAHFSPVNDLKHLNIMITAGPTREPLDPVRYISNHSSGKMGF
                     AIAAAAARRGANVTLVSGPVSLPTPPFVKRVDVMTALEMEAAVNASVQQQNIFIGCAA
                     VADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAETNNV
                     EEYARQKRIRKNLDLICANDVSQPTQGFNSENNALHLFWQDGDKVLPLERKELLGQLL
                     LDEIVTRYDEKNRR"
     gene            8944..9612
                     /locus_tag="JN001_000852"
     CDS             8944..9612
                     /locus_tag="JN001_000852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418095.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="JAB domain-containing protein"
                     /protein_id="HAY9052167.1"
                     /translation="MKNNSQLLMPREKMLKFGISALTDVELLALFLRTGTRGKDVLTL
                     AKEMLENFGSLYGLLTSEYEQFSGVHGIGVAKFAQLKGIAELARRYYNVRMREESPLL
                     SPEMTREFLQSQLTGEEREIFMVIFLDSQHRVITHSRLFSGTLNHVEVHPREIIREAI
                     KINASALILAHNHPSGCAEPSKADKLITERIIKSCQFMDLRVLDHIVIGRGEYVSFAE
                     RGWI"
     gene            9829..10065
                     /gene="rpmB"
                     /locus_tag="JN001_000853"
     CDS             9829..10065
                     /gene="rpmB"
                     /locus_tag="JN001_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HAY9052168.1"
                     /translation="MSRVCQVTGKRPVTGNNRSHALNATKRRFLPNLHSHRFWVESEK
                     RFVTLRVSAKGMRVIDKKGIDTVLAELRARSEKY"
     gene            10086..10253
                     /gene="rpmG"
                     /locus_tag="JN001_000854"
     CDS             10086..10253
                     /gene="rpmG"
                     /locus_tag="JN001_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010847629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HAY9052169.1"
                     /translation="MAKGIREKIKLVSSAGTGHFYTTTKNKRTKPEKLELKKFDPVVR
                     QHVIYKEAKIK"
     gene            10351..11160
                     /gene="mutM"
                     /locus_tag="JN001_000855"
     CDS             10351..11160
                     /gene="mutM"
                     /locus_tag="JN001_000855"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HAY9052170.1"
                     /translation="MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRL
                     SDQPVLSVQRRAKYLLLELPEGWIIIHLGMSGSLRILPEELPPEKHDHVDLVMSNGKV
                     LRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDDFNGEYLHQKCAKKKTAIKPWLMD
                     NKLVVGVGNIYASESLFAAGIHPDRLASSLSLAECELLARVIKAVLLRSIEQGGTTLK
                     DFLQSDGKPGYFAQELQVYGRKGEPCRVCGTPIVATKHAQRATFYCRQCQK"
     gene            complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="JN001_000856"
     CDS             complement(11199..11678)
                     /gene="coaD"
                     /locus_tag="JN001_000856"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HAY9052171.1"
                     /translation="MQKRAIYPGTFDPITNGHIDIVTRATQMFDHVILAIAASPSKKP
                     MFTLEERVALAQQATAHLGNVEVVGFSDLMANFARNQHATVLIRGLRAVADFEYEMQL
                     AHMNRHLMPELESVFLMPSKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAKLA"
     gene            complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="JN001_000857"
     CDS             complement(11686..12963)
                     /gene="waaA"
                     /locus_tag="JN001_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HAY9052172.1"
                     /translation="MLELLYTALLYLIQPLIWIRLWVRGRKAPAYRKRWGERYGFYRH
                     PLKPGGIMLHSVSVGETLAAIPLVRALRHRYPDLPITVTTMTPTGSERVQSAFGKDVQ
                     HVYLPYDLPDALNRFLNKVDPKLVLIMETELWPNLIAALHKRKIPLVIANARLSARSA
                     AGYAKLGKFVRRLLRRITLIAAQNEEDGARFVALGAKNNQVTVTGSLKFDISVTPQLA
                     AKAVTLRRQWAPHRPVWIATSTHEGEESVVIAAHQVLLQQFPNLLLILVPRHPERFPD
                     AINLVRQAGLSYITRSSGEVPSTSTQVVVGDTMGELMLLYGIADLAFVGGSLVERGGH
                     NPLEAAAHAIPVLMGPHTFNFKDICARLEQASGLITVTDATTLAKEVSSLLTDADYRS
                     FYGRHAVEVLYQNQGALQRLLQLLEPYLPPKTH"
     gene            13376..14434
                     /gene="rfaQ"
                     /locus_tag="JN001_000858"
     CDS             13376..14434
                     /gene="rfaQ"
                     /locus_tag="JN001_000858"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptosyltransferase
                     RfaQ"
                     /protein_id="HAY9052173.1"
                     /translation="MDKLFRRILLIKMRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQ
                     DTIPILSENPEINALYGIKNKKAKASEKIANFFHLIKVLRANKYDLIVNLTDQWMVAI
                     LVRLLNARVKISQDYHHRQSAFWRKSFTHLVPLQGGNVVESNLSVLTPLRVDSLVKQT
                     TMSYPPASWKRMRRELDHAGVGQNYVVIQPTARQIFKCWDNAKFSAVIDALHARGYEV
                     VLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVTFPELGALIDHAQLFIGVDSAPAHI
                     AAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYREMPTRDQRDRNEMYLSVIPAAD
                     VIAAVDKLLPSSTTGTSL"
     gene            14431..15555
                     /locus_tag="JN001_000859"
     CDS             14431..15555
                     /locus_tag="JN001_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HAY9052174.1"
                     /translation="MIVAFCLYKYFPFGGLQRDFMRIAQTVAARGHHVRVYTQSWEGE
                     YPDVFELIKVPVKSHTNHGRNAEYFAWVQKHLREHPVDKVVGFNKMPGLDVYYAADVC
                     YAEKVAQEKGFFYHLTSRYRHYAAFERATFEQGKPTQLLMLTDKQIADFQKHYQTEAE
                     RFHILPPGIYPDRKYSQQPANSREIFRKKNGITEQQYLLLQVGSDFTRKGVDRSIEAL
                     ASLPDSLRHNTLLYVVGQDKPRKFEALAEKRGVRSNVHFFSGRNDVSELMAAADLLLH
                     PAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIVDANCGEAIAEPFRQETLNEILRKA
                     LTQSSLRQAWAENARHYADTQDLYSLPEKAADIITGGLDG"
     gene            15548..16345
                     /gene="rfaP"
                     /locus_tag="JN001_000860"
     CDS             15548..16345
                     /gene="rfaP"
                     /locus_tag="JN001_000860"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312532.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(I) kinase RfaP"
                     /protein_id="HAY9052175.1"
                     /translation="MVELKEPFATLWRGKDPFEEVKTLQGEVFRELETRRTLRFEMAG
                     KSYFLKWHRGTTLKEIIKNLLSLRMPVLGADREWSAIHRLRDVGVDTMYGVAFGEKGI
                     NPLSRTSFIITEDLTPTISLEDYCADWATNPPDVRVKRMLIKRVATMVRDMHAAGINH
                     RDCYICHFLLHLPFSGKEEELKISVIDLHRAQLRTRVPRRWRDKDLIGLYFSSMNIGL
                     TQRDIWRFMKVYFAAPLKDILKQEQGLLSQAEAKATKIRERTIRKSL"
     gene            16361..17377
                     /gene="waaO"
                     /locus_tag="JN001_000861"
                     /gene_synonym="rfaI"
     CDS             16361..17377
                     /gene="waaO"
                     /locus_tag="JN001_000861"
                     /gene_synonym="rfaI"
                     /EC_number="2.4.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001540083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide
                     3-alpha-galactosyltransferase"
                     /protein_id="HAY9052176.1"
                     /translation="MSAHYFNPQEMINKTIIFDERPAASVASSFHVAYGIDKNFLFGC
                     GVSITSVLLHNNDVSFVFHVFIDDIPEADIQRLAQLAKSYRTCIQIHLVNCERLKALP
                     TTKNWSIAMYFRFVIADYFIDQQDKILYLDADIACQGNLKPLITMDLANNVAAVVTER
                     DANWWSLRGQSLQCNELEKGYFNSGVLLINTLAWAQESVSAKAMSMLADKAIVSRFTY
                     MDQDILNLILLGKVKFIDAKYNTQFSLNYELKKSFVCPINDETVLIHYVGPTKPWHYW
                     AGYPSAQPFIKAKEASPWKNEPLMRPVNSNYARYCAKHNFKQNKPINGIMNYIYYFYL
                     KIIK"
     gene            17394..18389
                     /locus_tag="JN001_000862"
     CDS             17394..18389
                     /locus_tag="JN001_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001001722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide 1,2-glucosyltransferase"
                     /protein_id="HAY9052177.1"
                     /translation="MNEFIKERFSYLADNKKENAPELNVSYGIDKNFLYGAGVSISSV
                     LINNSDINFVFHVFTDYVDDDYLKSFNETAKQFNTSIIVYLIDPKYFADLPTSQFWSY
                     ATYFRVLSFEYLSESISTLLYLDADVVCKGSLKPLTEIIFKDEFAAVIPDNDSTQAAC
                     AKRLNIPEMNGRYFNAGVIYVNLKKWHEANLTPYLLKLLRGETKYGSLKYLDQDALNI
                     AFNMNNIYLAKDFDTIYTLKNELYDRSHRKYQQTITDKTVLIHYTGITKPWHSWAGYP
                     SASYFNIAREQSPWKKYPLKEARTVAEMQKQYKHLFAHGEYIKGITSLIKYKLKK"
     gene            18399..19091
                     /gene="rfaY"
                     /locus_tag="JN001_000863"
     CDS             18399..19091
                     /gene="rfaY"
                     /locus_tag="JN001_000863"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000633080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide core heptose(II) kinase RfaY"
                     /protein_id="HAY9052178.1"
                     /translation="MITSIRYRGFSFYYKDNDNKYKEIFDEILAYNFKTVKVLCNIDD
                     TKVSLIDTKYGRYVFKVFAPKTKRNERFLKSFVKGDYYQNLIVETDRVRSAGLTFPND
                     FYFLAERKIFNYASVFIMLIEYVEGVELNDMPIIPENVKAEIKASMEKLHALNMLSGD
                     PHRGNFIVSKDGVRIIDLSGKSCTAERKARDRLAMERHLGIANEIKDYGYYSVIYRTK
                     LRKFIKKLKGKA"
     gene            19117..20142
                     /locus_tag="JN001_000864"
     CDS             19117..20142
                     /locus_tag="JN001_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000364797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-galactose--(galactosyl) LPS
                     alpha1,2-galactosyltransferase"
                     /protein_id="HAY9052179.1"
                     /translation="MDLLAESITEVAVSGEIANTDRVLNIAYGIDRNFLFGAAVSMQS
                     VVMHNPDLAVKFHLFTDYIDEDYLQRVNAFTSKNANVEVIIYKVSNAFIDIFPSLKQW
                     SYATFFRLVAFQYLSETIENLLYIDADVICKGSLAGLLDINFDEDKFAAVIKDVPFMQ
                     EKPAKRLAIEGLPGNYFNAGVVYLQLEAWAKNDFMNKAIAMLASDPQHTKYKCLDQDI
                     LNILFFGHCNFISGDYDCFYGIDYELKNKSDEDYKKTITDDTKLIHYVGVTKPWNDWT
                     NYPCQKYFNEAYQASCWNDVAFIPATNEKQYQVKYQHAKKNGDTFNAFIYFIKFKLNK
                     YKRKLFG"
     gene            20227..21210
                     /locus_tag="JN001_000865"
     CDS             20227..21210
                     /locus_tag="JN001_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HAY9052180.1"
                     /translation="MSNDYPLVSIIIPTYNSSDYITETLTKLEKQTYPNFEIVIVNDG
                     SKDNTSNVLREYGLTHSRLIIVNKENGGVSSARNTGIRKAQGQFICFMDDDDEIDPNY
                     LLKMYTRQHETGGDAIYCGLYGHYIKDGVTYSPINTEFNEGSLLFDFFYKKVRFHIGC
                     LFIRKQLLEENNLFFDEDLRLGEDLDFIYRLLITCDMYAVPYYMYKHNYRENSLMNSC
                     RTITHYRHESFAHERIYSSVMQLYKGNRKEEIHTLLSQNRAYHKTRYLWNVLLNGDFK
                     LLNQLVESNEKELRYCNLPGKRDKRRAKILASKNYILWRMVRLVNRKKNKR"
     gene            21256..22509
                     /locus_tag="JN001_000866"
     CDS             21256..22509
                     /locus_tag="JN001_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012602581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HAY9052181.1"
                     /translation="MSFCWNEINSGIKSLILILCIFSLMTLSLWDDVATKFLHAAGII
                     SALYFLATPKKTITNNPTLLIFISLCLLGIVNIIWYSHYKVSGSVYTNAYRGPMETGK
                     IALCSAFIFLVLFAKNEMRTKIKFGKLILFASLATQLLFFAHAMWQHFYLNVDRVALS
                     ASHATTAGYIILFPSLLASILILKSDFRHKTTLYTINFMLSLCAVIVTETRAAILVFP
                     FFALILIVMDSYINKRINYKLYCFIAIALLAGVFSFKDTLLMRMNDLNNDLVNYSHDN
                     TRTSVGARLAMYEVGLKTYSPIGQSLEKRAEKIHELEEKEPRLSGALPFVDSHLHNDL
                     IDTLSTRGIPGVVLTILAFSAILIYALRTAKEPYILILLFSLLVVGLSDVILFSKPVP
                     TAVFVTIILLCAYFKAQSDQYLLDK"
     gene            complement(22579..23559)
                     /gene="rfaC"
                     /locus_tag="JN001_000867"
     CDS             complement(22579..23559)
                     /gene="rfaC"
                     /locus_tag="JN001_000867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase RfaC"
                     /protein_id="HAY9052182.1"
                     /translation="MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQI
                     PSWHAAVERVIPVAIRRWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAAL
                     VTRLAHGVKHGLDWQTAREPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQ
                     GDYAIAQHFLTNLPTDAGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWG
                     APHEEERAKRLAEGFDYVEVLPKMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNI
                     TVYGPTDPGLIGGYGKNQMVCRAPGNELSQLTANAVKRFIEENAENAAMI"
     gene            complement(23563..24609)
                     /gene="rfaF"
                     /locus_tag="JN001_000868"
     CDS             complement(23563..24609)
                     /gene="rfaF"
                     /locus_tag="JN001_000868"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-heptose--LPS heptosyltransferase RfaF"
                     /protein_id="HAY9052183.1"
                     /translation="MKILVIGPSWVGDMMMSQSLYRTLQARYPQAIIDVMAPAWCRPL
                     LSRMPEVNEAIPMPLGHGALEIGERRKLGHSLREKRYDRAYVLPNSFKSALVPFFAGI
                     PHRTGWRGEMRYGLLNDVRVLDKEAWPLMVERYVALAYDKGIMRTAQDLPQPLLWPQL
                     QVSEGEKSYTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVL
                     FGSAKDHEAGNEILAALNTEQQAWCRNLAGETQLDQAVILIAACKAIVTNDSGLMHVA
                     AALNRPLVALYGPSSPDFTPPLSHKARVIRLITGYHKVRKGDAAEGYHQSLIDITPQR
                     VLEELNTLLLQEEA"
     gene            complement(24619..25551)
                     /gene="rfaD"
                     /locus_tag="JN001_000869"
     CDS             complement(24619..25551)
                     /gene="rfaD"
                     /locus_tag="JN001_000869"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HAY9052184.1"
                     /translation="MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD
                     LDIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLH
                     YCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANS
                     QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVA
                     DVNLWFLENGVSGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFT
                     QADLTNLRAAGYDKPFKTVAEGVTEYMAWLNRDA"
     gene            25765..26961
                     /gene="kbl"
                     /locus_tag="JN001_000870"
     CDS             25765..26961
                     /gene="kbl"
                     /locus_tag="JN001_000870"
                     /EC_number="2.3.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine C-acetyltransferase"
                     /protein_id="HAY9052185.1"
                     /translation="MRGEFYQQLTNDLETARAEGLFKEERIITSAQQADITVADGSHV
                     INFCANNYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM
                     EDAILYSSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYANNDMQE
                     LEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFV
                     GENGRGSHEYCDVMGRVDIITGTLGKALGGASGGYTAARKEVVEWLRQRSRPYLFSNS
                     LAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAGFTLAGADHAIIPVMLGD
                     AVVAQKFARELQKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGK
                     QLGVIA"
     gene            26971..27996
                     /gene="tdh"
                     /locus_tag="JN001_000871"
     CDS             26971..27996
                     /gene="tdh"
                     /locus_tag="JN001_000871"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine 3-dehydrogenase"
                     /protein_id="HAY9052186.1"
                     /translation="MKALSKLKAEEGIWMTDVPVPELGHNDLLIKIRKTAICGTDVHI
                     YNWDEWSQKTIPVPMVVGHEYVGEVVGIGQEVKGFKIGDRVSGEGHITCGHCRNCRGG
                     RTHLCRNTIGVGVNRPGCFAEYLVIPAFNAFKIPDNISDDLASIFDPFGNAVHTALSF
                     DLVGEDVLVSGAGPIGIMAAAVAKHVGARNVVITDVNEYRLELARKMGITRAVNVAKE
                     NLNDVMAELGMTEGFDVGLEMSGAPPAFRTMLDTMNHGGRIAMLGIPPSDMSIDWTKV
                     IFKGLFIKGIYGREMFETWYKMAALIQSGLDLSPIITHRFSIDDFQKGFDAMRSGQSG
                     KVILSWD"
     gene            28235..29269
                     /gene="waaH"
                     /locus_tag="JN001_000872"
                     /pseudo
     CDS             28235..29269
                     /gene="waaH"
                     /locus_tag="JN001_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418072.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucuronate:LPS(HepIII) glycosyltransferase"
     gene            complement(29256..30215)
                     /locus_tag="JN001_000873"
     CDS             complement(29256..30215)
                     /locus_tag="JN001_000873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312519.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HAY9052187.1"
                     /translation="MFPFRRNVLAFAALLALSSPVLAGKLAIVIDDFGYRPHNENQVL
                     AMPSAISVAVLPDSPHAREMATKAHNSGHEVLIHLPMAPLSKQPLEKNTLRPEMSSDE
                     IERIIRSAVNNVPYAVGINNHMGSKMTSNLFGMQKVMQALERYNLYFLDSVTIGNTQA
                     MRAAQGTGVKVIKRKVFLDDSQNEADIRVQFNRAIDLARRNGSTIAIGHPHPLTVRVL
                     QQMVYNLPPDITLVKASSLLNEPQVDTSTPPKNAVPDAPRNPFRGVKLCKPKKPIEPV
                     YANRFFEVLSESISQSTLIVYFQHQWQGWGKQPEAAKFNASAN"
     gene            complement(30219..31502)
                     /gene="envC"
                     /locus_tag="JN001_000874"
     CDS             complement(30219..31502)
                     /gene="envC"
                     /locus_tag="JN001_000874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein hydrolase activator EnvC"
                     /protein_id="HAY9052188.1"
                     /translation="MRGKAINTMTRAVKPRRFAIRPIIYASVLSAGVLLCAFSAHADE
                     RDQLKSIQADIAAKERAVRQKQQQRASLLAQLKKQEEAISEATRKLRETQNTLNQLNK
                     QIDEMNASIAKLEQQKAAQERSLAAQLDAAFRQGEHTGIQLILSGEESQCGQRLQAYF
                     GYLNQARQETIAQLKQTREEVAMQRAELEEKQSEQQTLLYEQRAQQAKLTQALNERKK
                     TLAGLESSIQQGQQQLSELRANESRLRNSIARAEAAAKARAEREAREAQAVRDRQKEA
                     TRKGTTYKPTESEKSLMSRTGGLGAPRGQAFWPVRGPTLHRYGEQLQGELRWKGMVIG
                     ASEGTEVKAIADGRVILADWLQGYGLVVVVEHGKGDMSLYGYNQSALVSVGSQVRAGQ
                     PIALVGSSGGQGRPSLYFEIRRQGQAVNPQPWLGR"
     gene            complement(31512..33056)
                     /gene="gpmM"
                     /locus_tag="JN001_000875"
                     /gene_synonym="pgmI"
     CDS             complement(31512..33056)
                     /gene="gpmM"
                     /locus_tag="JN001_000875"
                     /gene_synonym="pgmI"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HAY9052189.1"
                     /translation="MSVSKKPMVLVILDGYGYREEQQDNAIFSAKTPVMDALWANRPH
                     TLIDASGLEVGLPDRQMGNSEVGHVNLGAGRIVYQDLTRLDVEIKDRAFFANPVLTGA
                     VDKAKNAGKAVHIMGLLSAGGVHSHEDHIMAMVELAAERGAEKIYLHAFLDGRDTPPR
                     SAESSLKKFEEKFAALGKGRVASIIGRYYAMDRDNRWDRVEKAYDLLTLAQGEFQADT
                     AVAGLQAAYARDENDEFVKATVIRAEGQPDAAMEDGDALIFMNFRADRAREITRAFVN
                     ADFDGFARKKVVNVDFVMLTEYAADIKTAVAYPPASLVNTFGEWMAKNDKTQLRISET
                     EKYAHVTFFFNGGVEESFKGEDRILINSPKVATYDLQPEMSSAELTEKLVAAIKSGKY
                     DTIICNYPNGDMVGHTGVMEAAVKAVEALDHCVEEVAKAVESVGGQLLITADHGNAEQ
                     MRDPATGQAHTAHTNLPVPLIYVGDKNVKAVAGGKLSDIAPTMLSLMGMEIPQEMTGK
                     PLFIVE"
     gene            33301..33732
                     /locus_tag="JN001_000876"
     CDS             33301..33732
                     /locus_tag="JN001_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HAY9052190.1"
                     /translation="MQEIMQFVGRHPILSIAWIALLVAVLVTTFKSLTSKVKVITRGE
                     ATRLINKEDAVVVDLRQRDDFRKGHIAGSINLLPSEIKANNVGELEKHKDKPVIVVDG
                     SGMQCQEPANALTKAGFAQVFVLKEGVAGWAGENLPLVRGK"
     gene            33874..34125
                     /gene="grxC"
                     /locus_tag="JN001_000877"
     CDS             33874..34125
                     /gene="grxC"
                     /locus_tag="JN001_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HAY9052191.1"
                     /translation="MANVEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEM
                     IKRSGRTTVPQIFIDAQHIGGCDDLYALDARGGLDPLLK"
     gene            34188..34655
                     /gene="secB"
                     /locus_tag="JN001_000878"
     CDS             34188..34655
                     /gene="secB"
                     /locus_tag="JN001_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HAY9052192.1"
                     /translation="MSEQNNTEMTFQIQRIYTKDISFEAPNAPHVFQKDWQPEVKLDL
                     DTASSQLADDVYEVVLRVTVTASLGEETAFLCEVQQGGIFSIAGIEGTQMAHCLGAYC
                     PNILFPYARECITSMVSRGTFPQLNLAPVNFDALFMNYLQQQAGEGTEEHQDA"
     gene            34655..35674
                     /gene="gpsA"
                     /locus_tag="JN001_000879"
     CDS             34655..35674
                     /gene="gpsA"
                     /locus_tag="JN001_000879"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HAY9052193.1"
                     /translation="MNQRNASMTVIGAGSYGTALAITLARNGHEVVLWGHDPEHIATL
                     ERDRCNAAFLPDVPFPDTLHLESDLATALAASRNILVVVPSHVFGEVLRQIKPLMRPD
                     ARLVWATKGLEAETGRLLQDVAREALGDQIPLAVISGPTFAKELAAGLPTAISLASTD
                     QTFADDLQQLLHCGKSFRVYSNPDFIGVQLGGAVKNVIAIGAGMSDGIGFGANARTAL
                     ITRGLAEMSRLGAALGAEPATFMGMAGLGDLVLTCTDNQSRNRRFGMMLGQGMDVQSA
                     QEKIGQVVEGYRNTKEVRELAHRFGVEMPITEEIYQVLYCGKNAREAALTLLGRARKD
                     ERSSH"
     gene            35754..36575
                     /gene="cysE"
                     /locus_tag="JN001_000880"
     CDS             35754..36575
                     /gene="cysE"
                     /locus_tag="JN001_000880"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HAY9052194.1"
                     /translation="MSCEELEIVWNNIKAEARTLADCEPMLASFYHATLLKHENLGSA
                     LSYMLANKLSSPIMPAIAIREVVEEAYAADPEMIASAACDIQAVRTRDPAVDKYSTPL
                     LYLKGFHALQAYRIGHWLWNQGRRALAIFLQNQVSVTFQVDIHPAAKIGRGIMLDHAT
                     GIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGA
                     KIGAGSVVLQPVPPHTTAAGVPARIVGKPDSDKPSMDMDQHFNGINHTFEYGDGI"
     gene            complement(36628..37101)
                     /gene="trmL"
                     /locus_tag="JN001_000881"
     CDS             complement(36628..37101)
                     /gene="trmL"
                     /locus_tag="JN001_000881"
                     /EC_number="2.1.1.-"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HAY9052195.1"
                     /translation="MLNIVLYEPEIPPNTGNIIRLCANTGFRLHIIEPMGFAWDDKRL
                     RRAGLDYHEFTAVTRHHDYRAFLEAENPQRLFALTTKGTPAHSAVSYQDGDYLMFGPE
                     TRGLPASILDALPAEQKIRIPMVPDSRSMNLSNAVSVVVYEAWRQLGYPGALLRD"
BASE COUNT         9227 a         8862 c         9271 g         9873 t
ORIGIN      
        1 acgcatggtt tacctccaga cgtttagcga gccagcgttg cgacaggcgg gtgagttctc
       61 ctttgcgctg ctcatattcc atgcccatat caattaacgt gatattggtg ctttcgagat
      121 aggcgaggtg ttcaagctgt gctgcgttca tgctgtcccg tggttcgcca gtaatgccat
      181 ttgcctgcgc ccactgcttc gccgtcatgc cacccagcac gatacgggcg atcatgttgc
      241 tctcgttgct gtagtggcgc tgctgcgtcg ttttgcccat ctcggcacgg gccatattca
      301 gcgcatcgca cattggctta aagttgtttg cggcactgag acgggctttt agctggcgac
      361 gatagcgggc ggcgatttca ggcacgctac gctgtaattc ttcctcgcac tggatgaaat
      421 aacggcggat agcgcggccc tgctcgttgc gttcaaccat tgccacttct ttagccatat
      481 ccagcgatag caggtaatca tgctctattt gctggcgagt ttttgcgctc gcccgttttg
      541 gcgtgctcaa attttcaaca cggataaaat cggttccggc aataaaaccg tactggtcaa
      601 ttcggccttt aatccagtta gtaaagtcgc ggcccacccc cagcgcttta tgcaacgcct
      661 tagcgctcac aatattggct tcacgcccgc caatgcgtcc ggcaataacg ggaacaatag
      721 cggcaaagtc gttgccgtta attactcccg tgttaacgtt gggttgcggg gcggcccccg
      781 aactgaatcg gcttttttcg atagtcatat tttcggctcc gttatgcggc ggtgagattg
      841 tccgggtata gattgagaat gtcggcaatt tcaggctgag aaagtccctg atagccgcca
      901 gcgtcggcgt tatggttcac aagccgaata acttttagaa cgtcaccgcg cccggtaaag
      961 cgatagcgta aatgtgaccc tatcccgtcg gggttctttt cgtctatacg ctcaagctga
     1021 atatcaagcc tgcgctctaa ctcgctggcg tagttccttc cagacgaaag gcggcaataa
     1081 cgcagaatgt cattttctgt ccatccctct ataccagtac gcagcatata gactctggca
     1141 cgatgctttt tcggtgtgcg ctttggtgct tgaagggatt ttgtaagggg cgtaacatca
     1201 gatacgcgaa tatctgaatt agccgcctgt aatgggcggt ttttcttttc catcaggcca
     1261 ccttcccgcg gcgttctgcc agccagttgt gaatctcaac cgcatcaaac gcagttattt
     1321 tttctcccag ctttaccgga cgtggtagtg aaccgtttct tactttacgg tcgatggtgg
     1381 atacactaac gcccagcaat tcagccaggc ggaagcgtct gatatagcct tttgtaggga
     1441 tagtgtcgat gttcatgatt cccgtaacct cttagcgata gttgttgctt cgttacgggt
     1501 atttaatggc gtgcacgctc aaaaaggaat gatcgtattt tttactatcg tgatagtaaa
     1561 atttactatc accttttttt ccctgccgtg gtgcgttctt ccggtgttct gtctgcgtcg
     1621 gctatgagtt tcttcaggta atctatggat ggctcatcat agccgccccc caaaagcgcc
     1681 cagtggttta ttgtggcgtt cgcccatgct tcgttggttt ccttcccgtt cttcccttta
     1741 cactcttctg ggtagtgccg cttcacataa atcaacgcca agaggcaaat ttcgcgcttt
     1801 tgcctgtggc gctctctgtt tccgtgctca acgtttttaa catcctcata aagagcttgt
     1861 aagtttatgc gagtttcggg gctgtatatg ggctggtttt tgtccatgca ttcgccgata
     1921 tattcaaccc acggccttgt tatgtacaaa tcctctacgg atatttcgtg gaaggcatgt
     1981 tttgtataat cgagaaaaaa ataataattc gcacttacgt ctagttctct ttttctgtgt
     2041 gcggggctga atatgcgtgc gggagtgtca atagaatcaa gccctgcgat gtcgagtata
     2101 taggaggcgt taacatgcca tagcccaagc acatggcaat ctatatgatt tacaacgcct
     2161 gccttaaagc ttttttcgtc ctctacttca gtgattatgt cggcaagtaa taagcagtct
     2221 tctttgacgt ctgggaataa agagcaattg cggtaaagac tcgcgatgct atgtaatgtg
     2281 ccgtcgtagc cgcaaaggta cgcgctcaaa tatatagatt ctgccgccgc cataatcaaa
     2341 agatcatcaa tatctatttc taataattcg gctgctctgt taagcctgaa aaaaggggcg
     2401 ggtggtaatt ttttcattgt gtcacctttt acgctgcgcc ttattttgtg attgagccag
     2461 gcggtaaggc ttcccgcttt tcgccccgtc gagctaggct caatctattc agttagttcg
     2521 cccttctgag aggcgttacg ttgtagtctt ttccgctttc cagtgccacc agcagatcag
     2581 cccactgtgc cagtgctgct ttacgctcat caaaatactg atggcggtta taaatcccct
     2641 ctacgccctt aatgcgatga ttgaggcatc gttccgccac aacaggatca acacccaacg
     2701 ctgctaaatg agtacgtgcg gtgcgtcgaa agtcgtgaat cgtgaaatta ggcacatccg
     2761 gcatttcggc gcgaacctta gccagtgcta cgggtaaagt gctttcctga atatgtggga
     2821 tcattctgtt ttgcatcttc ctggccggaa gcacccatgc gctattacat gaaaaggtgt
     2881 gtagctctct caaccattca acggctgggg aaggtagagg tatatcaata gggtctccgt
     2941 ttttgctgcg ttcttccggc aaatgccata ccgcaccatc taaatcaaac tcttcccatc
     3001 gtgcggcgca taattccatt ttgcggacgc ataacgctaa cagtaatttg aacgtgattt
     3061 cgttctggcg actgaatccc ttagccgtgc gcatggcttt gaatagctgg attaactcat
     3121 cgcgggttaa ccagcggtca cgggcagctt ctttccctcc ggcgtctgcc acctcaaagg
     3181 ctgaacaggg gttaatctct agcgcgtgcc gtttgattcc gtagtcgaat atgcggcgcg
     3241 tccatctcag cacgtccgtt gctatggtcg gcgctccacg gtcaacaata cctttcagca
     3301 tgtcatcgat atggcgcggt ttcacgtcct ctaccttcat gctgccaatg caggggttta
     3361 tatctttgtc gatacggcgg cggagtatat cggggtgctt ccagcgcggg aggatctgac
     3421 gctcaaagta ttcagcggca agctctgaaa cgcgcatagc gttcttctct gcttccatct
     3481 tcgccagtgc ttcggttttg cgcttctgct tctctcctgc aacgtcatag cccagcgcaa
     3541 cgcgagccga tagctctttg gctgtctctc tggcctttga tagtgatagc tcgctatacg
     3601 aaccaattag catggcgcgg gacttccctg cgagtttata gcggaatctc catgtggggg
     3661 ttttgtcggc ttcacggtaa cgtaggtata aaccgttacc gtctgcccgc ccctcgaatc
     3721 gctctccgct cttaatccat gcgcggatct gcatgtctgt tagttttggc attttgcgaa
     3781 tatccaaact ttgaataggg ggtgtaccca aagcaatgta cccaaacctc attgggtaca
     3841 cctttgtgta caccataatc atgcgctttg ttgcgtcttt atgatagccc atgataacaa
     3901 aaaagcccgc tgggttgcgg gcttggtgtg atttatgcgt tgtcctaaat gttgctgata
     3961 gcttactcga tattctgaat ctgctcgcgc atctgctcaa tcaacacttt cagctcaatc
     4021 gcggagtttg tcacttcggc attgatagac ttcgacgcaa gagtgttcga ctcgcggttg
     4081 aattcctgca tcataaagtc cagacgacga ccaacggctt cttttttctt cagaatgttg
     4141 taggtctctt tgacatgcgc ttccaggcgg tccagttctt cggcaacgtc aattcgttgt
     4201 gccagcagaa ccagctcctg ctccagacgg ttgttttcca actgaacctg agcatcttcc
     4261 agcttcgcga ccagacgctc acgctgccat tgcaggattt ccggcatatg ggcgcggact
     4321 ttgaccactt cggcggtgac gccttccaga cgctgctcga tcaatgcttt cagtgcctga
     4381 ccttcggttt cgcgcgcgac aataaagtcg tccagcgtac catccagcgc cgcgagaatt
     4441 tcagcggcaa tggcgtcaag atcctgctcc tgggctgcca tcacgcccgg ccagcgtaga
     4501 atatcaaccg ggttgatttc cccttcgtca ctctgcattt ttacccagtt cgcggcagtt
     4561 accagctgtt tagccagttt ttcgttgagg atcagctcac cttgcgcgct aatatctggc
     4621 tcatagcgca gggtacattc cactttaccg cgcgtcaggc gagaacgaat acgctcgcga
     4681 acgacaggtt caaggctacg gaactgctcc ggcagacgaa agtaagtttc cagataacgc
     4741 tggtttaccg agcgcatttc ccaggttgcg ctcccccatt cacccttgat ttcacgccgg
     4801 gcgtaggcgg tcatactgcg gatcatagac gttcctgttt ataaaaggag aggtggaagg
     4861 attatagcca tcgatgcctt gtcaggatag gaataaccgc cggaagtccg tataatgcgc
     4921 agccacattt gtttcaagcc ggagatttca atatgcgtcc agcaggccgt agcaataatc
     4981 aggtgcgtcc cgttaccctg actcgtaact atacaaaaca tgcagaaggc tcggtgctgg
     5041 tcgaatttgg cgataccaaa gtgttgtgta ccgcctctat tgaagaaggc gtgccgcgct
     5101 tcctgaaagg tcagggccag ggctggatca ccgcagagta cggcatgctg ccacgttcta
     5161 cccacacccg taacgctcgt gaagcggcga aaggtaagca gggtggacgc acaatggaaa
     5221 tccagcgtct gatcgcccgt gctcttcgcg cggcagtaga tttgaaagcg ctgggtgagt
     5281 tcaccattac gctggactgc gacgtgcttc aggctgatgg tggcacgcgt accgcgtcga
     5341 ttacgggtgc ctgcgtggcg ctggcagatg cgctacagaa gctggtggaa aacggcaagc
     5401 tgaaaaccaa cccgatgaaa gggatggtag ccgcagtttc tgtcggaatt gtgaacggcg
     5461 aagcggtttg cgatctggaa tacgttgaag actctgccgc agagaccgac atgaacgtag
     5521 tgatgaccga agacgggcgc atcattgaag tgcaggggac ggcagaaggc gagccgttca
     5581 cccatgaaga gctactcacc ttgttggctc tggcccgagg gggaatcgaa tccattgtag
     5641 cgacgcagaa ggcggcgctg gcaaactgat ttttaaggcg actgatgagt cgcctttttt
     5701 ttgtctgtag aaaagtaaga tgaggagcga aggcatgaaa ccatatcagc gccagtttat
     5761 tgaatttgcg cttggcaagc aggtgttaaa gtttggcgag tttacgttga agtccgggcg
     5821 caaaagcccc tatttcttca acgccgggct gtttaatacc gggcgcgatc tggcactgtt
     5881 aggccgtttt tacgctgaag cgttggtgga ttccggcctt gagttcgatc tgctgtttgg
     5941 ccctgcttac aaagggatcc cgattgccac cactaccgcc gtggcgctgg cggagcatca
     6001 tgaccttgac ctgccgtact gctttaaccg caaagaggca aaagaccacg gtgaaggcgg
     6061 caatctggtt ggtagcgcgt tacaaggacg cgtaatgctg gtagatgatg tgatcaccgc
     6121 cggaacggcg attcgcgaat cgatggagat tattcaggct aatggcgcga cgcttgctgg
     6181 cgtgttgatt tcgcttgatc gtcaggaacg ggggcgcggc gagatttcgg cgattcagga
     6241 agttgagcgt gattacaact gcaaagtgat ctctatcatc accctgaaag acctgattgc
     6301 ttacctggaa gagaagccgg aaatggcgga acatctggcg gcggttaagg cctatcgcga
     6361 agagtttggc gtttaaagaa actcgccgga tgaaaagtca tccggcgtca tattactgca
     6421 actgtgccgc aattagcggc cagcgggcgt caaaatcatc cgtcgggcgg tatttaaatt
     6481 cgctgcggac aaaacgtgac agcatacctt cacagaaggc caggatctgg cttgccagca
     6541 gggtttcatc ggtggtgtaa ccttcaccct cacgcattct cttttcacgc aatacctgac
     6601 gcagctgcgc ttcaatacgc tcgaacagct ggttgatgcg cccttgcagg cgatcctgtt
     6661 caaacattag cgcatgacca gtgaggatgc gggtcaggcc aggattacgc tcaccaaaac
     6721 cgagaagcag caacacaatc agacgcaggc gcgctgtggt gtctttctca tctttcagaa
     6781 tcaggttgat gcgagtaatc aggctatctt cgataaactc aatcaggcta tcgaacatgc
     6841 gggtcttact ggggaagtgg cgatacagtg ccgcttcgga aacgccgaca gaggcggcca
     6901 gttttgccgt cgtgatacgt tggcttccat cgctggattc cagcatcagc gccagagact
     6961 gaagtatttc ctcgcgacgg ttccttttcg cagtttgttt ttctgccatg ttacaaaata
     7021 cccctgaaaa taagcacttg ccaggcggca cccacgctat gaccgcaaac gaaatgtttg
     7081 cggctatgtt atgacgttat tcggatgcgt atgtgttact gacgaccaga gtgaccaaag
     7141 ccgccttcac cgcggtcggt ggcgtcgaaa tcttccacca gattaaattc agcctgtact
     7201 accggaacaa aaatcatctg ggcgatgcgt tcgccaggtt gaatggtaaa gctgtcctga
     7261 ccacggttcc acacggaaat catcaactgg ccctgatagt cggaatcgat caatcctacc
     7321 aggttaccaa gcacgatacc gtgcttatgt cccaatccgg agcgcggcag catcattgcc
     7381 gccagtgaag gatcggcaat atgaatcgcc agcccggtcg gaaccagcgt agtgtcaccc
     7441 ggagccagtt ctacggcgtc gtcgagacag gcacgcaggt caagtccggc agagccagag
     7501 gtggcataag tcgggagcgg aaattccttc ccaacgcgcg ggtccagaat cttaacgtcg
     7561 atttttttca tcataacggg tcacgatctc gtcgagtaat agttggccaa ggagctcttt
     7621 gcgctcaagc ggtaagactt tatctccgtc ctgccagaaa aggtgtaatg cgttgttttc
     7681 gctgttaaat ccttgagttg gctgggaaac atcgttcgcg cagatcagat caaggttttt
     7741 acggatacgt ttttgccggg cgtattcttc cacattattt gtttcggcgg caaatccaac
     7801 gacgtagggt cgatggtctt ttagtgcggc aacgcctgcg acgatatcgg ggtttttaac
     7861 catttttatt gttaattcat caccctgcgt ggcctgcttt ttgatttttt ctggggccac
     7921 ggtagctgcg cgataatccg ccacggcggc gcagccgata aaaatatttt gctgctgtac
     7981 agaagcattc acggcggctt ccatttccag cgcggtcatc acatcaacac gtttaacaaa
     8041 cggtggcgtc ggtagtgaaa ccggacctga taccagcgtg acgttcgcgc cacgacgggc
     8101 agcggcggcg gcgatagcaa aacccatctt gccggagctg tgattagaga tataacgcac
     8161 gggatcgagc ggttcacgcg tcggaccggc ggtaatcata atgttcagat gtttcaggtc
     8221 gttgacgggc gaaaaatgcg ccaccgccat atccacaatg gttaacggat cgagcattcg
     8281 cccaggaccg atatcaccac aagcctgact gccactgtct ggcccccaga tgagcaaacc
     8341 acgggaagca agcccctcta aattatgctg cgtggcagcg gcacggtaca tctgctggtt
     8401 catggcgggg agcacggcta caggcgcagg tgtagccaga caaatcgtcg ataccaggtc
     8461 attcgccatt ccggcagcaa cacgggcaat caaatctgcc gtggcagggg cgagaatcac
     8521 taaatcagcc catttaccca gctcaatatg gcccatagcg gcttcggctg ccgggtccag
     8581 caaactgtcg gaaacgggat aaccagaaac cgcctgcaag ctaagtgggg tgataaaggc
     8641 ttttgccgct tcggtcatgg ctacgcggac gtcggccccg cgatcgcgca aacgacgcac
     8701 cagttcaggg gttttatagg cagcaatacc gccgctaacg ccgagaacga tttttttacc
     8761 ggccaggctc atgatgattt ttcctgttgg gtgacaccag aagttggcga ttttatcaca
     8821 atacttttgt tgtcgtgcct tcacctgaga atcactttgc gaggcgcttt ccaggattga
     8881 aaactggccg tcgatttaac ggaacggcta tgacaggatg cgagcaccac aaaggaggtg
     8941 aaggtgaaaa acaattcaca gctgttgatg ccgcgcgaaa aaatgctgaa gtttggtatt
     9001 agcgccttaa cggatgtcga gctgctggcg ctatttctgc gtaccggaac gcgcggtaaa
     9061 gatgtattaa ccctggcaaa agagatgctg gagaatttcg gctctcttta tggcttgtta
     9121 acctctgaat atgaacaatt tagtggcgtt catggaattg gcgtggcgaa atttgcccag
     9181 ttaaagggga ttgctgaact ggcgcggcgt tactacaacg tgcggatgcg tgaagaaagc
     9241 cctttactca gcccggagat gacgcgggaa tttttacaaa gccagcttac gggtgaggag
     9301 cgggagatct ttatggtgat ctttctcgac tcacaacacc gggttataac gcatagccgt
     9361 cttttttccg gcacgctaaa ccatgttgaa gtccatcctc gggaaattat ccgcgaagcg
     9421 ataaaaataa acgcctcggc gctgatcctt gcacataatc acccttcggg ttgtgctgaa
     9481 cccagtaaag cggataaact cattactgaa cggataataa agagttgtca gttcatggat
     9541 ttacgcgtgc tcgaccatat cgtgattggg cgtggagagt atgtttcttt tgccgaacgc
     9601 ggctggattt aacccgctat gcgcgatcct tcgggatctt tgtctgttcg ggacttgagc
     9661 acatcgctga gtcagcgtat actacgccac ctttgagaat ctcgggtttg gcatttgggc
     9721 ctggcaatcg agagttcaca tagaactgcg atgactgggc tgtaaagcct gacgaggcgc
     9781 caatacccca tacgaagctc gagctaattt gatttttgga gaatagacat gtcccgagtc
     9841 tgccaagtta ctggcaagcg tccggtgacc ggtaacaacc gttcccacgc actgaacgcg
     9901 actaaacgcc gtttcctgcc gaacctgcac tctcaccgtt tctgggttga gagcgagaag
     9961 cgttttgtca ccctgcgcgt atctgctaaa ggtatgcgtg taatcgataa aaaaggcatc
    10021 gatacagttc tggctgaact gcgtgcccgt agcgaaaagt actaagtact tagaggaaat
    10081 aaatcatggc taaaggtatt cgtgagaaaa tcaagctggt ttcttctgct ggtactggtc
    10141 acttctatac cactacgaag aacaaacgta ctaagccgga aaaactggaa ctgaaaaaat
    10201 tcgatccagt tgttcgccag cacgtgatct acaaagaagc gaaaatcaaa taattctcgc
    10261 tttgatgtaa caaaaaacct cgctccggcg gggttttttg ttatctgctt gcccccatat
    10321 tgactgcatc tgttcattcc tggagatgct atgcctgaat tacccgaagt tgaaaccagc
    10381 cgccgcggca tagaaccgca tctcgttggt gcaaccattc ttcatgcagt ggtgcgcaac
    10441 ggacgcttgc gctggccggt ttcagaagag atctaccgtt taagcgacca accagtgctt
    10501 agcgtgcagc ggcgggctaa atatctgctg ctggagctgc ctgagggctg gattatcatt
    10561 catttaggga tgtctggcag cctgcgcatc cttccagaag aacttccccc tgaaaagcat
    10621 gaccatgtgg atttggtgat gagcaacggc aaagtgctgc gctacaccga tccgcgccgc
    10681 tttggtgcct ggctgtggac caaagagctg gaagggcata atgtgctggc ccatcttgga
    10741 ccggagccgc ttagcgacga tttcaatggt gagtatctgc atcagaagtg cgcgaagaaa
    10801 aaaacggcga ttaaaccgtg gctgatggat aacaagctgg tggtaggggt agggaatatc
    10861 tatgccagcg aatcactgtt tgcggcgggg atccatccgg atcggctggc gtcatcactg
    10921 tcgctggcag agtgtgaatt gttagctcgg gtgattaaag cggtgttgct gcgttcgatt
    10981 gagcagggtg gtacaacgct gaaagatttt ctgcaaagtg atggtaaacc gggctatttc
    11041 gctcaggaat tgcaggttta cgggcgaaaa ggtgagccgt gtcgggtgtg cggtacgccg
    11101 attgtggcga ctaaacatgc gcagcgggca acgttttatt gtcggcagtg ccagaagtaa
    11161 ttcatgcgcg ccggatcgca taccatccgg cataaacgct acgctaactt cgccatcagc
    11221 gcctgatgga cattctccgg caggaaatgg gtgacatcgc cctgatggcg cgccacctct
    11281 ttcaccaacg atgaagagat aaacgaccac tctttcgacg gcatcagaaa cacactttcc
    11341 agttccggca ttaagtggcg attcatatgc gccagctgca tttcatattc aaaatccgcc
    11401 accgcacgca ggccacgaat cagcaccgta gcgtgttgat tacgggcgaa gttcgccatc
    11461 aaatcactaa acccaactac ttccacgttc cccagatgcg cggttgcctg ctgtgccagc
    11521 gccacacgct cttccagggt aaacatcggt tttttactgg ggctggcggc aatcgccaga
    11581 ataacgtgat cgaacatttg cgtggcgcgc gtcacgatat cgatatgacc attggtaatg
    11641 ggatcgaaag tacccggata aatcgcccgt ttttgcataa caacctcaat gcgttttcgg
    11701 tggcaggtaa ggttccagca gttgaagcag gcgctgtagc gcgccctggt tttgatacag
    11761 tacttcaacg gcatgacggc catagaaact acggtaatcg gcgtcggtga gtaaagagga
    11821 aacctctttt gcaagcgtag tggcatcggt aacggtaatc agcccgcttg cctgctccag
    11881 ccgcgcgcaa atgtctttaa aattaaaagt atgcggcccc atcaataccg gaatagcgtg
    11941 tgcggcagct tccagcggat tatgcccacc acgttcaacc agtgaaccgc caacaaaggc
    12001 gagatcggca atgccgtaca gtaacatcaa ctcgcccatc gtatcgccaa ccacaacctg
    12061 cgtgctggtg gaggggactt cccctgaaga gcgtgtgata tagcttagtc cagcctggcg
    12121 gacaaggtta atcgcatccg ggaagcgttc tggatgacgg ggtaccagga tgagcaataa
    12181 attcgggaat tgctgtaaca atacctgatg tgcggcgatc accacactct cttcaccttc
    12241 gtgagtgctg gtggcaatcc ataccgggcg gtgtggtgcc cactggcggc gcagcgtcac
    12301 ggctttagca gccaactgcg gcgttacaga aatatcgaat ttcaggctac cggtaacggt
    12361 tacctggtta ttttttgcgc ccagcgccac aaaacgtgca ccatcttctt cattttgggc
    12421 ggcaatcagc gtaatacgac gcagcaagcg acggacgaat ttacccagtt tggcataacc
    12481 tgcggccgag cgggcagaga gtcgcgcgtt cgcgatcacc agcggaattt tacgtttatg
    12541 tagcgccgca atcaggttag gccatagttc tgtttccata atcaacacca gtttagggtc
    12601 gactttattc aggaaacgat taagtgcatc gggcaggtca tacggcagat aaacgtgctg
    12661 aacatccttc ccgaaagccg attgtacgcg ctccgaaccg gttggcgtca tggttgtaac
    12721 ggtaatcggt aaatcaggat aacgatgacg cagcgcgcgc accaacggga tcgccgccag
    12781 agtttcaccg acggagacgg agtgcagcat aatgccgcct ggttttagcg gatggcggta
    12841 aaaaccgtaa cgttcacccc agcgttttcg ataggccgga gccttacgtc cgcgcaccca
    12901 gagccgtatc cagatcagcg gctgaataag gtagagaagg gcggtgtaaa gcaattcgag
    12961 catagtaaat agctgactta tggatgtgct ggggattcta tgtatttagc tgtggcttta
    13021 ccattacttt tcccgttttt gacttaaata gcaatttacc cgccaattct tgctgaacat
    13081 ctatactttt tttgtatttt tatgcgattc attgatttct gctgtacgtg caggaaggaa
    13141 tcgcagagca acagtgaaag aatatggttg ctaatgattt tatttgattg atttctttat
    13201 tgaaaatcaa caatgtgctt aaaaatcatt cgggtcggat tgccgcgaaa gaagtgatac
    13261 actagcgcgt caatatcagt gcggtatcag tattcaggta gctgttgagc ctggggcggt
    13321 agcgtgcttt ttctgcttca ccttaatcgg ataatctcaa caaaaagagt tacttgtgga
    13381 taagctattt cgaagaattt tgctcattaa gatgcgtttt catggggata tgttattaac
    13441 tactcccgtc attagttcgc tgaaaaaaaa ttaccctgac gcaaaaatcg atgtgctgct
    13501 ttatcaggac accatcccga tcctgtctga aaatccagag attaacgcgc tctacggcat
    13561 aaaaaataaa aaagcaaaag cctcagaaaa aattgccaac ttttttcatc tcatcaaggt
    13621 attacgtgcc aataagtatg accttatcgt caatctcacc gatcaatgga tggttgctat
    13681 actggttcgc ttattaaatg cccgtgtgaa aatttcccag gattatcatc atcggcagtc
    13741 tgctttttgg cgtaaaagtt tcacccattt ggtgccgttg cagggtggaa atgtggtgga
    13801 aagtaactta tccgtgctga ccccattgcg agttgattcg ttggtgaagc agacaaccat
    13861 gagttacccg cctgcaagct ggaaacgtat gcgtcgcgaa cttgatcatg ctggtgttgg
    13921 acaaaattat gtggttatcc aacctacggc gcggcaaatc ttcaaatgct gggacaacgc
    13981 caagttttcc gctgtgattg atgccttaca tgctcgtggt tatgaagttg ttctgacgtc
    14041 cggcccagat aaagacgatc tggcctgcgt caatgaaatt gcgcagggat gccagacgcc
    14101 accagtaacg gcgctggctg gaaaggtgac cttcccggaa cttggtgcgt taatcgatca
    14161 tgcgcagctg tttattggcg ttgattccgc accggcgcat attgccgctg cagttaatac
    14221 gccgctgata tcgctgtttg gtgcgacaga ccatattttc tggcgtccct ggtcaaataa
    14281 catgattcaa ttctgggcgg gagattaccg ggaaatgcca acgcgcgatc agcgtgaccg
    14341 aaatgagatg tatctttcgg ttattccggc ggcagatgtc attgctgctg tcgataaatt
    14401 actgccctcc tccacgacag gtacgtcgtt atgatcgttg ctttttgttt atataaatat
    14461 tttccctttg gcggtttgca gcgcgatttt atgcgtattg ctcagacagt cgccgcccga
    14521 ggtcatcatg ttcgggttta tacccagtcg tgggaaggcg aataccctga tgtatttgaa
    14581 ctgatcaaag tgccggttaa atcgcatacc aatcacgggc gcaatgcgga gtattttgcc
    14641 tgggtgcaaa aacatttacg cgaacatccc gtcgataaag tcgttggatt caacaaaatg
    14701 ccggggctgg acgtttatta tgccgctgat gtttgttatg ccgagaaagt cgcgcaggaa
    14761 aaaggctttt tctatcacct gacgtcacgt tatcgccatt atgccgcctt tgagcgggca
    14821 accttcgaac agggcaagcc gacacagctg ctgatgctga cagataagca aatcgccgat
    14881 ttccagaaac attatcagac tgaagcggag cgttttcata ttctgccacc ggggatttat
    14941 cctgatcgta aatatagcca gcagccagct aatagccgtg aaatcttccg taagaagaat
    15001 ggaataaccg aacaacaata tttattgttg caggtcggtt cagacttcac gcgtaaaggt
    15061 gtcgatcgtt ccattgaagc acttgcttcg ttaccggatt cgctgcgcca caacacattg
    15121 ctatatgttg ttggacagga taaaccgcga aaatttgagg cgctggcaga aaaacgcggc
    15181 gtgcgcagta atgttcactt cttctcgggg cgcaacgatg tctcggaatt aatggcggcg
    15241 gcggatttat tactgcatcc tgcctaccag gaagcagcgg gaattgtgct actggaagcg
    15301 attactgcag gattaccggt actaacaaca gccgtttgtg gctatgcgca ttatattgtc
    15361 gacgccaatt gcggcgaggc tattgctgag ccattccgcc aggaaacatt gaatgagatt
    15421 ttacgcaaag cgttaacgca atcttcattg cgccaggcct gggcggaaaa tgcgcgacat
    15481 tatgctgata cacaagattt atacagtctg ccagagaaag cggcggatat cataacgggt
    15541 ggtctggatg gttgaactta aagagccgtt tgccacgtta tggcgcggta aagatccttt
    15601 tgaggaagtt aaaaccttgc agggtgaggt ttttcgtgaa ctggaaactc gccgcactct
    15661 gcgatttgaa atggcgggca aaagctattt tctcaaatgg catcgcggca cgaccctgaa
    15721 agagataatc aaaaatttac tctcattgcg gatgccagta ttaggcgcag accgcgaatg
    15781 gagtgcgatt catcgactgc gggatgtcgg cgttgatact atgtatgggg tggcatttgg
    15841 cgaaaaaggt attaatccgc tgagcagaac ctcgtttatt attaccgaag atctgacccc
    15901 aaccatcagt ctggaagatt actgtgctga ctgggcgacc aacccaccag atgttcgcgt
    15961 aaagcgtatg cttattaagc gtgtcgcgac gatggtgcgc gatatgcatg ctgcgggcat
    16021 taaccaccgt gactgttata tctgtcattt cctgctgcac ttgccttttt ccggtaagga
    16081 agaggagtta aaaatttcgg taattgacct acaccgggcg cagcttcgca cgcgcgttcc
    16141 acgtcgttgg cgcgataaag atcttatagg gctttatttt tcttcaatga atattggcct
    16201 gactcagcgg gatatctggc ggtttatgaa agtgtatttt gccgccccgc ttaaagacat
    16261 tctcaagcag gaacaaggac tgctgtcgca agcagaagca aaagccacaa aaatcaggga
    16321 aagaacgatt cgaaaatcgt tgtaatttcc ggagagaaat atgagtgccc actattttaa
    16381 tccacaagag atgatcaata agacaatcat cttcgatgaa aggccagcgg cgtcagtggc
    16441 atcatcattc catgttgctt atggcattga taaaaacttt ctttttggtt gtggtgtttc
    16501 aatcacgtca gttttgttac ataacaacga cgtgagtttt gttttccacg tttttattga
    16561 tgatatccct gaagccgata tccagcgttt agcccaattg gcgaaaagct atcgtacctg
    16621 tatccagatc catctagtaa attgtgaacg gcttaaggca ttaccgacga ccaaaaattg
    16681 gtctattgcc atgtatttcc gttttgtaat tgcagattac tttattgatc aacaagataa
    16741 gatcctttac ctggatgctg atatcgcctg tcagggaaac ttaaagccgc tgataacaat
    16801 ggatcttgcc aataacgttg ctgctgttgt tactgaacgc gatgctaact ggtggtcgtt
    16861 acggggtcaa agtctgcagt gtaatgaact tgaaaagggc tactttaatt caggtgtcct
    16921 gttaattaat acactagcgt gggcgcagga gtccgtttct gctaaagcga tgtcgatgct
    16981 tgctgataaa gccatcgttt cccgtttcac ctatatggat caagatatcc ttaatcttat
    17041 cctgttaggg aaagttaaat tcattgatgc taaatacaat acgcaattta gtttaaatta
    17101 tgaattaaaa aaatcatttg tttgtccaat taatgatgaa accgtattaa ttcattatgt
    17161 cggcccgaca aaaccctggc attactgggc cggttatcca agtgcgcaac cttttatcaa
    17221 agccaaagaa gcatcgccct ggaaaaatga accgttaatg cggccagtta actcaaacta
    17281 tgctcgttat tgcgccaagc ataattttaa acaaaataaa ccaattaacg ggataatgaa
    17341 ttatatttat tatttttatt taaagataat aaaatgaaat tgagaaaagt taaatgaatg
    17401 aatttataaa agaacggttt tcgtatttag cagataataa aaaagaaaac gccccagagc
    17461 taaatgtttc ctacggtatc gataagaatt ttttgtatgg tgctggcgtt tcaatttctt
    17521 ccgttttgat taataattca gatattaatt ttgtctttca tgttttcact gattatgtgg
    17581 atgatgatta tttaaagtca tttaatgaaa cagcaaaaca atttaatacc tcaattattg
    17641 tatatttaat tgaccccaaa tactttgctg atctgccgac gtcacagttt tggtcatacg
    17701 cgacatactt cagggtattg tcttttgaat atctgagtga aagtatttcc acactgctgt
    17761 atctggatgc cgatgttgtt tgtaaaggaa gcctgaaacc tctcacagaa attatattta
    17821 aagatgagtt tgctgcggtc attcctgaca atgatagtac tcaggcggca tgtgcaaaac
    17881 gcctcaacat tcccgaaatg aatggacgtt atttcaatgc aggcgttatc tatgtcaatc
    17941 ttaaaaaatg gcatgaagca aatttgacac cgtatttact caaactttta cgaggggaaa
    18001 ctaaatatgg ctctcttaaa tatttagatc aggatgcgtt gaatatcgca tttaatatga
    18061 ataatatcta ccttgcgaag gattttgata ctatttatac cctgaaaaac gaactttatg
    18121 atcgtagtca tcgaaagtat cagcaaacca ttaccgataa aacagtgttg attcactata
    18181 cagggataac taaaccatgg catagctggg ctggatatcc gtctgcatca tactttaata
    18241 tcgcgcgtga acaatctccc tggaagaaat atcctcttaa agaggcgcgg actgttgcag
    18301 aaatgcagaa acaatataag catctgtttg cccatggtga gtatataaaa ggcataactt
    18361 cattaattaa gtacaagctt aagaaataaa ttactcttat gattacaagt atacgttatc
    18421 gcggcttctc attttattac aaagataatg ataataaata taaagaaatc tttgatgaaa
    18481 tactggccta taattttaaa acagtaaaag tattatgtaa tattgatgat accaaagtat
    18541 cgttgattga tacgaaatat ggtcgctatg tttttaaagt ctttgctccg aaaacgaaaa
    18601 ggaatgaacg ttttttaaaa tcttttgtaa aaggtgacta ctatcagaat ttgatcgttg
    18661 aaaccgatcg tgtcagaagt gcaggtctta cttttcctaa tgatttttat tttctggctg
    18721 agcgtaaaat tttcaactat gccagtgttt ttatcatgct tatcgagtat gtcgagggcg
    18781 tagagctcaa tgatatgccg attattccag aaaatgttaa agcagaaatt aaggcttcga
    18841 tggaaaaatt gcatgcctta aatatgctat cgggcgaccc acaccggggt aactttatcg
    18901 ttagtaaaga tggtgtcagg ataattgacc tatccggtaa aagctgtacg gcagagcgta
    18961 aagctcgtga tcgtctggcc atggaacgtc acctgggtat tgccaacgaa ataaaagatt
    19021 atggctacta ttcagtaatc tacagaacca aactacgcaa atttattaaa aaattaaaag
    19081 gcaaagcgta aaccacacag tcaaaacgga accaacatgg atttattagc agagagtatt
    19141 actgaagtcg ctgtctctgg ggaaattgct aacaccgatc gtgtgttaaa tatcgcttac
    19201 ggtattgacc gtaacttttt atttggtgcg gcagtatcta tgcaatcagt tgttatgcat
    19261 aacccggacc ttgcggttaa gtttcatctc tttaccgact acattgatga agattatcta
    19321 caacgtgtta atgcttttac cagcaaaaat gctaacgttg aagtaataat ttataaagtc
    19381 tccaatgcct ttattgatat cttccccagc ctgaaacagt ggtcttatgc aacattcttc
    19441 cgtttagttg cgttccagta tttgagtgaa actattgaaa atctgttata tatcgatgct
    19501 gatgtcatct gtaaaggctc attagctgga ttgcttgata ttaattttga tgaggataag
    19561 ttcgcagctg ttattaaaga tgtgcctttt atgcaggaaa aaccagcgaa gcgtctggct
    19621 atagagggac ttccagggaa ttatttcaac gccggtgtag tatatctgca gcttgaagca
    19681 tgggcgaaaa atgattttat gaataaagcc attgctatgc tggcaagtga cccgcagcac
    19741 acgaagtata aatgccttga tcaggatatt ttaaatattc tgttctttgg tcattgtaat
    19801 tttattagcg gcgattatga ttgcttttat ggcattgact atgagttaaa aaataaaagc
    19861 gatgaagatt ataaaaagac cattaccgat gatactaagc tgattcatta tgttggcgta
    19921 acgaagccct ggaacgactg gacgaattat ccctgccaga agtattttaa tgaggcttat
    19981 caggcttctt gctggaatga tgtggcgttt attccagcca cgaatgaaaa gcagtatcaa
    20041 gtgaaatatc aacatgcaaa gaaaaatggt gatacgttta acgcttttat ttacttcatt
    20101 aaatttaaat taaataagta taaaagaaaa ctatttggat aataataaaa atcatggatg
    20161 tctgagttac aataataatt aaggatgagt actatcatat tttattagtt caggcaagag
    20221 aacacgatga gcaatgatta ccctttagta tctataataa taccgacgta taattcatct
    20281 gattacatta ctgaaactct aacgaaatta gaaaaacaaa cttacccaaa ttttgaaatt
    20341 gttattgtta atgatggttc taaagataac acatcaaacg ttttgagaga gtatgggtta
    20401 acccactctc gattaattat tgtcaataaa gaaaatggcg gtgtttcgtc tgccaggaat
    20461 acaggtatcc gcaaggcgca aggacagttt atatgtttta tggatgatga tgatgagata
    20521 gatcctaact atctgctgaa gatgtatacc agacaacatg agacgggagg ggatgcgatt
    20581 tattgtgggc tttatggcca ttatataaaa gatggtgtta cttactcacc tataaataca
    20641 gagtttaatg aaggatcttt acttttcgac tttttttata aaaaggttag attccatata
    20701 gggtgcttgt ttataagaaa acaacttctg gaagagaata atcttttttt tgatgaagat
    20761 ttacgactag gagaagatct tgattttatc tatcgactgc taattacatg cgatatgtat
    20821 gcggttccat attatatgta taagcataac tatagagaaa attccttaat gaactcatgt
    20881 agaaccatca ctcattatcg acatgagtca tttgcgcacg aaagaatcta ctcttctgtg
    20941 atgcagttat acaaaggtaa ccggaaagaa gaaattcata cattattgag tcaaaataga
    21001 gcttatcata aaactcgtta tttatggaat gttctactta atggtgattt taaactattg
    21061 aatcaattag ttgaaagcaa tgaaaaagaa ttaagatatt gtaatcttcc tggcaagaga
    21121 gataagagac gagcaaaaat attagcatca aaaaattata ttctctggag gatggtaaga
    21181 ctggtaaata gaaaaaagaa taaacgttag atcttgcatt aaataaccca tcctcgtagc
    21241 ataggttgaa attatatgtc gttttgttgg aatgaaatta attctggtat aaagtcttta
    21301 attcttatat tatgtatttt ttctttaatg actttgtctt tatgggatga tgttgcaaca
    21361 aagtttcttc atgcagctgg aattatatct gcattgtatt ttcttgcgac accaaaaaaa
    21421 acaataacta ataatcctac tttgttaatt ttcatctcat tatgtctttt gggtatcgta
    21481 aatatcatct ggtattcaca ttataaagtt tcaggctctg tttataccaa tgcatatcgt
    21541 ggcccaatgg aaactggaaa aattgccttg tgtagcgctt ttattttctt agttcttttt
    21601 gctaaaaatg agatgagaac aaaaataaaa tttgggaaac taattctgtt cgcatccctg
    21661 gcaacgcagt tacttttttt tgcgcatgcc atgtggcaac atttctattt aaacgtcgac
    21721 cgtgttgcat tatcagcttc ccacgctaca acagcaggct acatcatcct ttttccttct
    21781 ttactggcat caattctcat tttaaaatcc gactttagac ataaaacaac attatataca
    21841 attaacttca tgcttagctt atgtgctgtc atagtaactg agacgcgtgc agccatatta
    21901 gtgtttccat tctttgcgtt aatattaatc gtaatggata gttatattaa taagcgaatt
    21961 aattataagt tatattgttt tattgcgatt gcattattag caggtgtatt ttcttttaaa
    22021 gatacattgc ttatgagaat gaatgactta aataacgatt tagttaatta ttcgcatgat
    22081 aacaccagaa cttcagtcgg tgcccgtctg gcaatgtatg aagttggctt aaaaacatat
    22141 tctccaatag gacaatcact ggaaaaacgt gcagaaaaaa tacatgagct agaagaaaaa
    22201 gagcctagat tgagtggcgc tttacctttt gtagattctc atttgcataa cgatctcata
    22261 gatacgttat caacgcgtgg tattcctgga gttgtattaa caattttagc attttcagca
    22321 atactcatat atgccttaag aactgctaaa gaaccttata ttttaatctt gcttttttca
    22381 ctactggtag taggcctaag tgatgtaata ctcttttcta aaccggttcc gactgctgtg
    22441 tttgtcacca taatattgct ttgtgcttat tttaaagcac aatcagacca atatttatta
    22501 gataagtaat gaatatatga aataaaatca gcaaggaggc tgattttatt tcaaaattat
    22561 ctattaaggg gttgtaattt aaatcatagc agcgttttca gcgttttctt caatgaatcg
    22621 cttaacagca tttgctgtca attgagacaa ctcattcccc ggagccctac aaaccatttg
    22681 attcttccca tacccaccaa ttaatcccgg atcggttggt ccataaaccg tgatattggg
    22741 tctatccagt gccgccgtta aatggcttaa ccccgtatcc accgacacta caaatttagc
    22801 cccggccagc acgcgggcaa cgccttccag actcatcttc ggcaatactt caacataatc
    22861 aaatccttcc gccagtcgtt tcgcccgttc ttcctcatgc ggcgcgcccc acggaagttt
    22921 aatccgtatt cctgaatcag ccagtaaacc aatcaattct cgccagtgtt cttccggcca
    22981 gtgtttatca tcacgggtcg tcgcatgaag aaatacggca tattcgccag catctgtagg
    23041 caggttcgtc agaaaatgct gtgcgatagc ataatcgccc tgggtttgcg gtttgctata
    23101 gcccaaactt ttggcaaaca gttcgcgggt gcgttctacg gcgtgctgct gttttgcaat
    23161 atgatgctta caattgtaaa acaggctggc taaaggttcg cgagcggttt gccagtccaa
    23221 tccatgcttt acgccatgcg ccagacgtgt caccagtgcc gcgcttttta ccagcccctg
    23281 agcgtcgata actgcgtcat agttctctgc ttgtagcgct tcacgaaacg ctttgcgttc
    23341 agcttttatg ggggccgaga accaggcttt acgccagcga cgtattgcca caggaataac
    23401 tcgctcaacg gcagcgtgcc aggaaggaat ctgtgcgaac ccttcttcca ccacccagtc
    23461 aaacttaatc cctgggattg cctgctgggc atcagtgagt gcgggcaacg tatggagaac
    23521 atcgcccatc gacgatgttt taacgatcaa aacccgcatc cgtcaggctt cctcttgtaa
    23581 caatagcgtg ttgagttctt ccagtacgcg ctggggagta atgtcgatca agctctggtg
    23641 ataaccctcc gcagcgtcac ctttacgcac tttgtgatag ccggtaatca gacggatcac
    23701 gcgcgcttta tgggatagcg gcggtgtgaa gtccgggcta cttggaccat acagggcaac
    23761 cagcggacga ttgagcgccg ccgcaacgtg catcaggcca gaatcgttag tgacaatggc
    23821 tttacaggct gcaatcagga taaccgcttg atcaagctgt gtttcccccg ccaggttccg
    23881 acaccatgcc tgctgctcgg tattcaaagc ggcaagaatc tcattgcccg cttcatgatc
    23941 tttcgcagag ccaaacagaa ccacctgata accttcatca atcagctgct ttgccagttc
    24001 cgcatagtgg tagtgtggcc agcgttttgc cggaccaaac tccgcacccg ggcaaaagcc
    24061 aatcatcgga cgttctgatg aaagcgaaaa ttgattacag gtatatgatt tttcaccttc
    24121 gctcacctgc aactgcggcc ataacaatgg ctgcggcaga tcttgtgcgg tacgcataat
    24181 gcctttgtca taggccagcg cgacatagcg ttccaccatt agcggccagg cttctttatc
    24241 gagcacgcgt acatcgttga gtaaaccgta gcgcatctcg ccgcgccagc cggtgcgatg
    24301 aggaataccc gcgaagaaag gcactaatgc agatttgaag gagttgggta agacgtaggc
    24361 gcggtcgtag cgcttttcac gcaggctatg acccagtttg cggcgttcgc cgatttccag
    24421 cgctccgtga ccgagaggca tagggatagc ttcgttaact tccggcatcc gcgataataa
    24481 tggacggcac catgccggtg ccatcacatc gattatcgcc tggggatagc gcgcctggag
    24541 cgtgcgatag agactttgcg acatcatcat gtcgccaacc caagacgggc cgatcaccag
    24601 tattttcatg cagagctctt atgcgtcgcg attcagccag gccatgtatt ccgttacacc
    24661 ttcagcaacg gttttgaacg gtttgtcgta acccgccgcg cgcagatttg tcagatctgc
    24721 ctgagtgaac gcctggtagc ggcctttcag cttatccggg aacggaatgt attcgatctg
    24781 gcctttcttg tgataagcca gagtagcatc tgctacggcc tggaaggatt ccgcacgacc
    24841 agtaccgagg ttgaagatac cggaaacgcc attttccagg aaccacaggt ttacatctgc
    24901 cacgtcgccc acatagacga agtcacgttt gaagttctcg ctaccttcaa acagcttcgg
    24961 tgattcaccg ttgttaagct gagtgttgag atggaaagcg acgctcgcca tgctgccttt
    25021 atggccttca cgcggtccat aaacgttgaa atagcggaag ccaacaatct gcgagttcgc
    25081 ttcaggcagg atttggcgaa catattcatc aaacaggaat tttgagtaac cgtagacgtt
    25141 caacggtttt tcgtactcgc gggattcaat aaagtcggag gtgcgtccgc cgtaggtggc
    25201 tgcggaagaa gcgtacagga acgggatttc gcgctccagg cagtagtgca gcagctcctt
    25261 ggagtattga tagttgttat ccatcatata cttgccgtcc cactcggtgg tggaagagca
    25321 tgcgccttcg tggaaaatcg cttcgacatc gccgaactct tcgccagcca taatctggat
    25381 caggaagtct tccttatcca tatagtccgc gatatccaga tccaccaggt tcacaaactt
    25441 ggtgccgtct ttcaggttgt ccaccaccag aatatcggtg atgcctttat cattcagggc
    25501 cttaacgatg ttgctgccga taaagcccgc gccgccggta acgatgatca taactgtaac
    25561 cttcgaatta tggagtcaga gacaatctca gacacgaata cttctatcat atcactatac
    25621 ggcgttggct tcagccattc gccaaaagtg agattgatgg acgttattta tcctgaattt
    25681 tgcagaagtg ttaacgcgtc atctcgtcgc gacgtataag tttgggtaat atgtgctgga
    25741 atttgccctg tctggagaat cgcaatgcgt ggagaatttt atcagcagtt aaccaacgat
    25801 ctggaaaccg cacgggcgga agggttgttt aaagaagagc gcattattac gtctgcgcag
    25861 caagcagata tcactgtggc tgatggaagc cacgtcatta acttttgtgc caacaactat
    25921 ctcgggctgg cgaatcatcc ggatctgatt gcggcagcaa aggcgggaat ggattctcac
    25981 ggtttcggca tggcttcggt gcgttttatt tgcggcactc aggacagcca taaagagctt
    26041 gaacaaaaac tggcggcatt cctggggatg gaagatgcga ttctctactc ttcctgcttt
    26101 gatgctaacg gtggactgtt tgaaacgctg ctgggtgcgg aagacgccat tatctccgac
    26161 gcactgaacc acgcgtctat tattgatggt gtgcgtctgt gcaaagctaa acgctatcgc
    26221 tatgccaaca acgatatgca ggagctggaa gcacgtctga aagaagcgcg tgaagccggt
    26281 gcgcgtcatg tgctgattgc caccgatggt gtgttctcaa tggacggcgt gattgccaac
    26341 ctgaaaggcg tttgcgatct ggcagataaa tacgatgcct tggtgatggt ggatgactcc
    26401 cacgcggtcg gttttgtcgg tgaaaatggt cgtggttccc atgaatactg cgatgtgatg
    26461 ggccgggtcg atattatcac cggtacgctt ggtaaagcgc tgggcggggc ttctggtggt
    26521 tataccgcgg cgcgcaaaga ggtggttgag tggctgcgcc agcgttctcg tccgtacctg
    26581 ttctccaact cgctggcacc ggccattgtt gccgcgtcca tcaaagtact ggagatggtc
    26641 gaagcgggca gcgaactgcg tgaccgtctg tgggcgaacg cgcgtcagtt ccgtgagcaa
    26701 atgtcggcgg cgggctttac cctggcggga gccgatcacg ccattattcc ggtcatgctt
    26761 ggtgatgcgg tagtggcgca gaaatttgcc cgagagctgc aaaaagaggg catttacgtc
    26821 accggtttct tctatccggt cgttccgaaa ggtcaggcgc gtattcgtac ccagatgtct
    26881 gcggcgcata cccctgagca aattacgcgt gcagtagaag cattcacgcg tattggtaaa
    26941 caactgggcg ttatcgcctg aggatgtgag atgaaagcgt tatccaaact gaaagcggaa
    27001 gagggcatct ggatgaccga cgtccctgta ccggaactcg ggcataacga tctgctgatt
    27061 aaaatccgta aaacagccat ctgcgggact gacgttcaca tctataactg ggatgagtgg
    27121 tcgcaaaaaa ccatcccggt gccgatggtc gtaggccatg aatatgtcgg tgaagtggta
    27181 ggtattggtc aggaagtgaa aggcttcaaa atcggcgatc gcgtttctgg cgaaggccat
    27241 atcacctgcg gtcactgtcg caactgtcgt ggcggtcgta cccatctgtg ccgcaacacg
    27301 atcggcgtcg gcgttaaccg tccgggctgc ttcgccgaat atctggtgat cccggcgttc
    27361 aacgccttca aaatcccaga caatatctcc gacgacctgg cttccatttt tgatcccttc
    27421 ggtaacgccg tgcataccgc gctgtcgttc gatctggttg gcgaggatgt gctggtctct
    27481 ggtgcaggtc cgataggtat tatggctgcg gcggtggcga aacacgttgg tgcacgcaat
    27541 gtggtgatca ctgatgttaa cgaataccgc cttgagctgg cgcgcaaaat gggtatcacc
    27601 cgtgcggtta acgtcgcgaa agaaaacctt aatgatgtga tggctgaact gggcatgacc
    27661 gaaggctttg atgtcggtct ggaaatgtcc ggtgcgccgc cagcgtttcg taccatgctt
    27721 gacaccatga accacggcgg ccgtattgcg atgctgggta ttccgccgtc tgatatgtct
    27781 atcgactgga ccaaagtgat ctttaaaggc ttgttcatta aaggtattta cggtcgtgag
    27841 atgtttgaaa cctggtacaa gatggcggcg ctgattcagt ctggcctcga tctctcgccg
    27901 atcattaccc atcgtttctc tatcgatgat ttccagaagg gctttgacgc tatgcgttcg
    27961 ggccagtccg ggaaagtaat tctgagctgg gattaacacg aacaagggct ggtattccag
    28021 cccttttatc tggggataat ctgttgaata tgtaaaatcc tgtcagtgta ataaagagtt
    28081 cgtaattgcg ctgatctctt atatagctgt tctcattatc tctctaccct gaagtgactc
    28141 tctcacctgt aaaaataata tctcacaggc ttaatagttt cttaatacaa agcctgtaaa
    28201 acgtcaggat aacttcagag gtcgtcggta atttatgatg aacagcacca ataaacttag
    28261 tgttattatt ccgttatata atgcgggcga tgatttccgc acttgtatgg aatctttaat
    28321 tacgcaaacc tagactgctc tggaaatcat tattattaac gatggttcaa cggataattc
    28381 tgttgaaata gcaaagcatt acgcagaaaa ctatccgcac gttcgtttgt tgcatcaggc
    28441 gaatgctggc gcatcggtag cgcgtaatcg tgggatcgag gtggcgacgg gcaaatatgt
    28501 cgcttttgtc gatgctgacg atgaggtcta tcccaccatg tacgaaacgc tgatgaccat
    28561 ggcgttagag gacgacctcg acgtggcgca gtgcaacgct gactggtctt ttcgtgaaac
    28621 gggagaaacc tggcaatcca tccccagcga tcgccttcgc tcaaccggcg tattaaccgg
    28681 cccggactgg ctgcggatgg ggctttcttc gcgccgttgg actcacgttg tctggatggg
    28741 ggtttatcgc cgtgatgtta ttgttaaaaa taacattaaa tttattgccg gattacatca
    28801 tcaggatatt gtctggacaa cagaattcat gtttaacgcg ctgcgtgcgc gatataccga
    28861 gcaatcatta tataaatatt atctgcataa tacgtcagtg agtcggttgc atagacaagg
    28921 gaataaaaac cttaattatc aacgtcacta tattaagatt acccgcctgc tggagaaatt
    28981 aaatcgaaat tatgccgaca aaattacgat ttatccggaa tttcatcagc aaataactta
    29041 cgaagcattg cgtgtttgcc atgcggtgcg caaagagccg gatattctta cccgccaacg
    29101 gatgattgcc gagatattta cttccggtat gtataagcgc ctgattacca atgtgcgcag
    29161 cgtgaaggtc ggttaccagg cgttactgtg gtctttccgc ttatggcaat ggcgcgacaa
    29221 aacgcggtcg caccatcgca ttacgcgtag cgcctttaat ttgcgctagc gttaaacttc
    29281 gccgcttcgg gctgtttgcc ccagccttgc cactgatgct ggaagtaaac gatcagcgtg
    29341 ctctggctga tgctttcgct taatacttca aagaagcgat tagcataaac aggttctatc
    29401 ggtttcttcg gtttgcacag cttcacgcca cggaacggat tacgcggtgc atcaggcaca
    29461 gcgtttttcg gcggtgtaga agtatcaacc tgcggttcat tcagcaagct gctggctttc
    29521 accagcgtaa tgtctggcgg caggttataa accatctgtt gtagcacgcg taccgttaaa
    29581 gggtgaggat gcccaatggc aatggttgaa ccgttgcgac gcgccagatc aattgcgcga
    29641 ttaaattgca cacggatgtc cgcttcgttc tgcgaatcgt cgaggaacac cttccgttta
    29701 ataaccttca cgccagtacc ttgcgcggcg cgcatcgcct gggtattacc gatggttacg
    29761 ctgtcgagga agtaaagatt gtaacgctcc agtgcctgca tcactttctg cataccaaac
    29821 aggttagagg tcatcttgct acccatgtgg ttgttgatcc ccacggcata gggcacgtta
    29881 ttgaccgcac tacgaataat gcgctcaatt tcgtcgctgc tcatctccgg gcgcagcgta
    29941 tttttctcca gcggctgttt actcagtggt gccatcggga gatgaatcaa cacttcgtgc
    30001 ccgctgttat gcgctttggt cgccatctct ctggcgtgcg gtgaatcggg taatacagcg
    30061 acggagatag cggagggcat cgccagcacc tggttttcgt tgtgcgggcg atacccaaaa
    30121 tcatcaatga cgatggcaag tttgccagca agtacggggg aggagagcgc caacagagcg
    30181 gcaaatgcaa gaacgttacg acgaaatgga aacaaaactt atcttcccaa ccacggctgt
    30241 ggattgaccg cctgaccctg gcggcgaatt tcgaaataga gtgaaggccg accctgaccg
    30301 ccactgctgc ccaccagtgc aattggctgg cccgcgcgaa cctgcgaacc aacgctcacc
    30361 agtgcgctct gattatagcc gtaaagactc atgtcgcctt taccgtgctc aaccaccacc
    30421 accagaccgt aaccttgcag ccagtcagcc agaatcactc gaccgtcggc aattgcttta
    30481 acttcagtac cttcagaggc accgataacc atccctttcc agcgtaattc accctgtagc
    30541 tgctcgccat agcgatgcag cgtcggcccg cgaaccggcc agaatgcctg accacgcggc
    30601 gcacccagac caccagttcg ggacatcagc gatttttcgc tttcggtcgg tttgtaggtg
    30661 gtgcctttgc gcgtcgcttc tttctggcgg tcgcgaaccg cctgggcctc acgcgcttct
    30721 cgttcagcac gcgctttcgc cgcggcttcc gcacgggcaa tgctgttacg cagacgggat
    30781 tcgttggcac gcagttcact tagctgctgc tgaccttgct ggatggaaga ttccagcccc
    30841 gccagcgtct ttttacgctc gttcagagcc tgagtcagtt tcgcctgttg ggcgcgctgt
    30901 tcatataaca gcgtttgttg ctcgctttgt ttctcttcca gttcagcacg ctgcatggcg
    30961 acttcttcac gcgtttgctt caactgggca atggtttctt gtcgcgcctg gttgagatag
    31021 ccgaaataag cctgtaaacg ctgtccacac tggctttctt caccgctgag aattagctga
    31081 ataccggtat gctcgccctg acggaatgcg gcatccagtt gtgcggcgag gctgcgctcc
    31141 tgggcggctt tttgctgctc cagtttggca atcgacgcgt tcatctcatc aatctgttta
    31201 ttgagttgat tgagcgtgtt ttgcgtttcg cgcagcttac gggtggcttc agagatcgct
    31261 tcttcctgct ttttcaattg tgcgagcagg cttgcgcgtt gttgttgctt ttggcgtacc
    31321 gcgcgctctt ttgcggcgat atcggcctga atagatttga gttggtcacg ctcatccgcg
    31381 tgggcggaaa aggcgcacaa caatacgcca gcgctaagaa cgctggcgta gatgatgggc
    31441 ctgattgcaa acctgcgcgg tttcacggcc cgtgtcatgg tattaatcgc ctttcccctc
    31501 atggggaggg attattccac gatgaacagc ggcttaccag tcatctcttg cgggatttcc
    31561 atacccatca gcgacaacat ggtcggcgcg atgtcagaaa gtttgccgcc tgcaaccgct
    31621 ttcacgttct tatcaccaac gtaaatcagc ggaactggca ggttggtgtg tgccgtgtgt
    31681 gcctgacccg ttgccggatc gcgcatctgt tcagcgttac cgtggtcagc ggtgatcagc
    31741 agttgtccac ccacggactc aaccgctttc gcgacttctt ccacgcagtg atccagtgct
    31801 tcaaccgctt taaccgccgc ttccatcacc ccggtgtgac ctaccatgtc gccgttcgga
    31861 tagttacaga taatggtgtc gtatttgccg ctcttgatgg ccgcaaccag tttttcggtc
    31921 agctctgcgg agctcatttc cggttgcaga tcgtaggtag ccactttagg tgagttgatc
    31981 agaatgcgat cttcgccttt gaatgactct tctacgccac cgttgaagaa gaaagtaacg
    32041 tgggcatatt tttcggtttc ggaaatacgc aactgagttt tgtcgttttt cgccatccac
    32101 tcgccgaagg tgttaaccag ggaagcgggt gggtaagcaa ccgcagtttt gatgtcagcg
    32161 gcgtattcgg tcagcatcac gaaatcgacg ttaaccactt tcttacgcgc gaagccgtcg
    32221 aaatctgcgt ttacgaatgc acgagtgatt tcgcgcgcgc ggtcagcacg gaagttcatg
    32281 aaaatcagcg catcgccgtc ttccattgcc gcatctggct gaccttctgc acgaataacg
    32341 gtcgctttca cgaactcgtc gttttcgtcg cgagcataag ctgcctgcaa accagcaacg
    32401 gcagtatcgg cctggaactc accctgcgcc agagtcagca ggtcataggc tttttcaacg
    32461 cgatcccaac ggttatcgcg gtccatcgcg tagtaacgac caatgatgga cgctacgcgg
    32521 cctttaccca gcgcagcaaa tttctcttca aattttttca gcgaggattc agcactgcgc
    32581 ggcggggtgt cgcgaccgtc aaggaatgcg tgcaggtaga ttttttctgc gccgcgttca
    32641 gctgccagtt ctaccatcgc catgatgtga tcttcgtggc tgtgtacgcc gcctgcggag
    32701 agcagaccca taatgtgtac tgctttacct gcgtttttcg ctttatctac cgcgccagtc
    32761 agcactggat tagcaaagaa agcgcgatct ttgatttcaa cgtccagacg agtcaggtcc
    32821 tgatacacga tgcggccggc acccaggtta acgtggccta cttcggagtt acccatctga
    32881 cggtcaggca gaccgacttc cagaccggaa gcgtcgatca gggtatgcgg acgattggcc
    32941 cacagtgcat ccattaccgg ggttttagca ctaaaaatgg cgttatcctg ctgttcttca
    33001 cgatagccat agccatccag aatcaccagt accataggtt ttttagaaac cgacattgcg
    33061 acaacctcat actcaagagt caaaatttgc gtaattttac tacagctgaa tcgataaaat
    33121 agcctctgaa gatcaaaata tacgaccgct cgcggcaagc cgatgccaga tttgcgcttt
    33181 tttttcgtcg tgccccgcaa aattgcattc cagttaacgc gctggctgta tttgccgcac
    33241 cgcgcaggta tactcctttc ctggtttttt taatcactac gtcgggagtt gttacccccc
    33301 atgcaagaaa ttatgcaatt tgttggccgt catcccatac tgagtatcgc ttggatcgcg
    33361 ttactggtgg cggttcttgt gactacgttt aagagcctga cctcgaaagt gaaggtgatt
    33421 actcgtggtg aagctacgcg tctgatcaac aaagaagacg ctgtggttgt ggatttacgt
    33481 cagcgtgatg acttccgtaa aggccatatc gcaggttcta tcaatctgtt gccgagcgaa
    33541 atcaaagcca acaatgttgg tgagcttgag aagcacaaag acaaaccggt tatcgtggta
    33601 gacggttctg gcatgcagtg ccaggagcct gcaaacgcgc tgacgaaagc tggttttgcg
    33661 caagtattcg tgctgaaaga gggcgttgct ggctgggctg gcgaaaactt gcctctggtg
    33721 cgcggcaaat aatttacctg tcgtctttca tgatgcaggc cgttagctgc aattaggccc
    33781 ccagcgactt attgttataa gcttctgggg acactccatt ttgcagccgc cctgcaacat
    33841 gaaatttcag ggtaaaaaaa caggagctaa attatggcca atgttgaaat ctataccaaa
    33901 gaaacctgcc cgtattgcca tcgtgcaaaa gcactgctga gcagcaaggg cgtgagtttt
    33961 caggagttgc cgatcgatgg caatgccgcc aagcgtgaag agatgatcaa acgcagcggt
    34021 cgcaccacgg ttccccagat ttttattgac gcacagcaca ttggcggctg tgatgacttg
    34081 tatgcattgg atgcacgtgg tggactggat cccctgctga aataacgtgt gaacgttggc
    34141 attacattgc gcagtattta aggacaacac ttaagggttt tctacacatg tcagaacaaa
    34201 acaacactga aatgactttc cagatccaac gtatttatac caaggatatc tctttcgaag
    34261 cgccgaacgc gccgcacgtt ttccagaaag attggcaacc agaagttaaa cttgatctgg
    34321 atacggcatc ttcccaactg gcagatgacg tatacgaagt ggtactgcgt gttaccgtaa
    34381 cggcctccct gggcgaagaa accgcgttcc tgtgtgaagt tcagcagggc ggtattttct
    34441 ccatcgcggg tatcgaaggc acccagatgg cacattgcct gggcgcatac tgcccgaaca
    34501 ttctgttccc gtatgctcgt gagtgcatca ccagcatggt atcccgcggt acattcccgc
    34561 aactgaacct tgcgccggtt aacttcgatg cgctgttcat gaactatttg cagcagcagg
    34621 ctggcgaagg tactgaagaa catcaggatg cctgatgaac caacgtaatg cttcaatgac
    34681 tgtgatcggt gccggctcgt acggcaccgc tcttgccatt accctggcaa gaaatggcca
    34741 cgaggttgtc ctctggggcc atgaccctga acatatcgca acgcttgaac gcgaccgctg
    34801 taacgccgcg tttctccccg atgtgccttt tcccgatacg ctccatcttg aaagcgatct
    34861 cgccactgcg ctggcagcca gccgtaatat tctcgtcgtc gtacccagcc atgtctttgg
    34921 tgaagtgctg cgccagatta aaccgctgat gcgtcctgat gcgcgtctgg tgtgggcgac
    34981 caaagggctg gaagcggaaa ccggacgtct gttacaggac gtggcgcgtg aggccttagg
    35041 cgatcaaatt ccgctggcgg ttatctctgg cccaacgttt gcgaaagaac tggcggcagg
    35101 tttaccgacg gctatttcgt tggcctctac cgaccagacc tttgccgatg atctccaaca
    35161 attgctgcac tgtggcaaaa gtttccgcgt ttacagcaac ccggatttca tcggtgtgca
    35221 gcttggcggt gcggtgaaaa acgtcattgc cattggcgcg gggatgtccg acggtatcgg
    35281 ttttggtgcg aatgcgcgta cggcactgat cacccgtggg ctggctgaaa tgtcgcgtct
    35341 tggcgcggcg ctgggtgccg agcctgccac ctttatgggc atggcggggc tgggcgatct
    35401 tgtgcttacc tgtaccgaca accagtcgcg taaccgccgt tttggcatga tgctcggtca
    35461 gggcatggat gtacaaagcg cgcaggagaa gattggtcag gtggtggaag gctaccgcaa
    35521 tacgaaagaa gtccgcgaac tggcgcatcg cttcggcgta gaaatgccaa taaccgagga
    35581 aatttatcaa gtattatatt gcggaaaaaa cgcgcgcgag gcagcattga cgttattagg
    35641 tcgtgcacgc aaggacgagc gcagcagcca ctaaccccag ggaacctttg ttaccgctat
    35701 gacccggccc gcgcagaacg ggccggtcat tatctcatcg tgtggagtaa gtaatgtcgt
    35761 gtgaagaact ggaaattgtc tggaacaata ttaaagccga agccagaacg ctggcggact
    35821 gtgagccaat gctggccagt ttttaccacg cgacgctact caagcacgaa aaccttggta
    35881 gtgcactgag ctacatgctg gcgaacaagc tgtcatcgcc aattatgcct gctattgcta
    35941 tccgtgaagt ggtggaagaa gcctacgccg ctgacccgga aatgatcgcc tctgcggcct
    36001 gtgatattca ggcggtgcgt acccgcgacc cggcagtcga taaatactca accccgttgt
    36061 tatacctgaa gggttttcat gccttgcagg cctatcgcat cggtcactgg ttgtggaatc
    36121 aggggcgtcg cgcattggca atctttctgc aaaaccaggt ttctgtgacg ttccaggtcg
    36181 atattcaccc ggcagcaaaa attggccgtg gcattatgct cgaccacgcc acgggcatcg
    36241 ttgtgggtga aacggcggta attgaaaacg acgtatcgat tctgcaatct gtgacgcttg
    36301 gcggtacggg taaatctggt ggtgaccgtc acccgaaaat tcgtgaaggt gtgatgattg
    36361 gcgcgggcgc gaaaatcctc ggcaatattg aagttggtcg cggcgcgaag attggcgcag
    36421 gttccgtggt gctgcaaccg gtgccgccgc atacaaccgc cgctggcgtt ccggctcgta
    36481 ttgtcggtaa accagacagc gataagccat caatggatat ggaccagcat ttcaacggta
    36541 ttaaccatac atttgagtat ggggatggga tctaatgtcc tgtgatcgtg ccggatgcga
    36601 tgtaatcatc tatccggcat acagtaacta atctctcaac aacgctcccg gatatcccag
    36661 ctgccgccag gcttcataca ccactaccga caccgcattg gacagattca tgctgcggct
    36721 gtccggcacc atcggaatgc gaattttttg ttcagcgggc agggcatcaa gaatgctcgc
    36781 tggcaggccg cgtgtttccg ggccgaacat cagataatcg ccatcctgat agcttacggc
    36841 gctgtgagca ggcgtacctt tcgtggtgag ggcaaacagg cgctggggat tttctgcttc
    36901 gaggaacgcg cgatagtcat gatgacgcgt aacggcggta aactcgtgat agtccagccc
    36961 cgcgcggcgc aggcgcttat cgtcccaggc aaatcccatc ggttcgatga tatgcagacg
    37021 aaagccggta ttagcgcaaa gacggatgat gttgccagta tttggcggaa tttctggttc
    37081 gtaaagtacg atgtttagca tactgccccc ttagtgcggg ggcaggatag cagaaaattg
    37141 gtgaaccgtg cggccttttc ccctcacccc ggccctcccc ctgtctcttg atcaggagat
    37201 ctgatcaaga gacagctccc tgagggagag ggt
//
LOCUS       DADMJE010000019        36829 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.019, whole genome shotgun sequence.
ACCESSION   DADMJE010000019 DADMJE010000000
VERSION     DADMJE010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36829)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36829)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36829
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.019"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            586..672
                     /gene="leuL"
                     /locus_tag="JN001_000882"
     CDS             586..672
                     /gene="leuL"
                     /locus_tag="JN001_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leu operon leader peptide"
                     /protein_id="HAY9052196.1"
                     /translation="MTHIVRFIGLLLLNASSLRGRRVSGIQH"
     gene            765..2336
                     /gene="leuA"
                     /locus_tag="JN001_000883"
     CDS             765..2336
                     /gene="leuA"
                     /locus_tag="JN001_000883"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016831521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HAY9052197.1"
                     /translation="MSQQVIIFDTTLRDGEQALQASLSVKEKLQIALALERMGVDVME
                     VGFPVSSPGDFESVQTIARQVKNSRVCALARCVEKDIDVAAESLKVAEAFRIHTFIAT
                     SPMHIATKLRSTLDEVIERAIYMVKRARNYTDDVEFSCEDAGRTPIADLARVVEAAIN
                     AGATTINIPDTVGYTMPFEFAGIISGLYERVPNIDKAIISVHTHDDLGLAVGNSLAAV
                     HAGARQVEGAMNGIGERAGNCSLEEVIMAIKVRKDILNVHTAINHQEIWRTSQLVSQI
                     CNMPIPANKAIVGSGAFAHSSGIHQDGVLKNRENYEIMTPESIGLNQIQLNLTSRSGR
                     AAVKHRMDEMGYKESEYNLDNLYDAFLKLADKKGQVFDYDLEALAFIGKQQEEPEHFR
                     LDYFSVQSGSNDIATAAVKLACGEEVKAEAANGNGPVDAVYQAINRITDYNVELVKYS
                     LTAKGHGKDALGQVDIVANYNGRRFHGVGLATDIVESSAKAMVHVLNNIWRAAEVEKE
                     LQRKAQHNENNKETV"
     gene            2336..3427
                     /gene="leuB"
                     /locus_tag="JN001_000884"
     CDS             2336..3427
                     /gene="leuB"
                     /locus_tag="JN001_000884"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HAY9052198.1"
                     /translation="MSKNYHIAVLPGDGIGPEVMTQALKVLDAVRNRFAMRITTSHYD
                     VGGAAIDNHGQPLPPATVEGCEQADAVLFGSVGGPKWEHLPPDQQPERGALLPLRKHF
                     KLFSNLRPAKLYQGLEAFCPLRADIAANGFDILCVRELTGGIYFGQPKGREGSGQYEK
                     AFDTEVYHRFEIERIARIAFESARKRRHKVTSIDKANVLQSSILWREIVNEIATEYPD
                     VELAHMYIDNATMQLIKDPSQFDVLLCSNLFGDILSDECAMITGSMGMLPSASLNEQG
                     FGLYEPAGGSAPDITGKNIANPIAQILSLALLLRYSLDADDAACAIERAINRALEEGI
                     RTGDLARGAAAVSTDEMGDIIARYVAEGV"
     gene            3430..4830
                     /gene="leuC"
                     /locus_tag="JN001_000885"
     CDS             3430..4830
                     /gene="leuC"
                     /locus_tag="JN001_000885"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HAY9052199.1"
                     /translation="MAKTLYEKLFDAHVVYEAENETPLLYIDRHLVHEVTSPQAFDGL
                     RAHGRPVRQPGKTFATMDHNVSTQTKDINACGEMARIQMQELIKNCKEFGVELYDLNH
                     PYQGIVHVMGPEQGVTLPGMTIVCGDSHTATHGAFGALAFGIGTSEVEHVLATQTLKQ
                     GRAKTMKIEVQGKAAPGITAKDIVLAIIGKTGSAGGTGHVVEFCGEAIRDLSMEGRMT
                     LCNMAIEMGAKAGLVAPDETTFNYVKGRLHAPKGKDFDDAVAYWKTLQTDEGATFDTV
                     VTLQAEEISPQVTWGTNPGQVISVNDNIPDPASFADPVERASAEKALAYMGLKPGIPL
                     TEVAIDKVFIGSCTNSRIEDLRAAAEIAKGRKVAPGVQALVVPGSGQVKAQAEAEGLD
                     KIFIEAGFEWRLPGCSMCLAMNNDRLNPGERCASTSNRNFEGRQGRGGRTHLVSPAMA
                     AAAAVTGHFADIRNIK"
     gene            4841..5446
                     /gene="leuD"
                     /locus_tag="JN001_000886"
     CDS             4841..5446
                     /gene="leuD"
                     /locus_tag="JN001_000886"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HAY9052200.1"
                     /translation="MAEKFIKHTGLVVPLDAANVDTDAIIPKQFLQKVTRTGFGAHLF
                     NDWRFLDEKGQQPNPDFVLNFPQYQGASILLARENFGCGSSREHAPWALTDYGFKVVI
                     APSFADIFYGNSFNNQLLPVKLSDAEVDELFALVKANPGIHFDVDLEAQEVKAGEKTY
                     RFTIDAFRRHCMMNGLDSIGLTLQHDDAIAAYEAKQPAFMN"
     gene            complement(5495..6577)
                     /locus_tag="JN001_000887"
     CDS             complement(5495..6577)
                     /locus_tag="JN001_000887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052201.1"
                     /translation="MIWIMTMARRMNGVYAAFMLVAFMMGVAGALQAPTLSLFLSREV
                     GAQPFWIGLFYTVNTIAGIGVSLWLAKRSDSQGDRRKLIIFCCLMAIGNAPLFAFNRH
                     YLTLITCGVLLASLANTAMPQLFALAREYADNSAREVVMFSIAAGIFTLSLVLIAFML
                     PSVARVELPSENALSMQGGWQDSNVRMLFVASTLMWTCNTMYIIDMPLWISSELGLPD
                     KLAGFLMGTAAGLEIPAMILAGYYVKRYGKRRMMVIAVAAGVLFYTGLIFFHSRMALM
                     TLQLFNAVFIGIVAGIGMLWFQDLMPGRAGAATTLFTNSISTGVILAGVIQGAIAQSW
                     GHFAVYWVIAVISVVALFLTAKVKDV"
     gene            complement(6679..6810)
                     /gene="sgrT"
                     /locus_tag="JN001_000888"
     CDS             complement(6679..6810)
                     /gene="sgrT"
                     /locus_tag="JN001_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose uptake inhibitor SgrT"
                     /protein_id="HAY9052202.1"
                     /translation="MRQFYQHYFTATAKLCWLRWLSVPQRLTMLEGLMQWDDRNSES"
     gene            6899..8554
                     /locus_tag="JN001_000889"
     CDS             6899..8554
                     /locus_tag="JN001_000889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator SgrR"
                     /protein_id="HAY9052203.1"
                     /translation="MPSARLQQQFIRLWQCCEGKSQDTTLNELAALLSCSRRHMRTLL
                     NTMQDRGWLTWEAEVGRGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVGDKAT
                     VRQMLVSHLGRSFRQGRHILRVLYYRPLRNLLPGSALRRSETHIARQIFSSLTRINEE
                     NGELEADIAHHWQQISPLHWRFFLRPGVHFHHGRELEMDDVIASLKRINTLPLYSHIA
                     DIVSPTPWTLDIHLTQPDRWLPLLLGQVPAMILPREWETLSNFASHPIGTGPYAVIRN
                     TTNQLKIQAFDDFFGYRALIDEVNVWVLPEIADEPAGGLMLKGPQGEEKEIESRLEEG
                     CYYLLFDSRTHRGANQQVRDWVNYVLSPTNLVYFAEEQYQQLWFPAYGLLPRWHHART
                     IKSEKPAGLESLTLTFYQDHSEHRVIAGIMQQILASHQVTLEIKEISYDQWHEGEIES
                     DIWLNSANFTLPLDFSLFAHLCEVPLLQHCIPIDWQADAARWRNGEMNLANWCQQLVA
                     SKAMVPLIHHWLIIQGQRSMRGLRMNTLGWFDFKSAWFAPPDP"
     regulatory      8588..8687
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            8718..9701
                     /gene="thiB"
                     /locus_tag="JN001_000890"
     CDS             8718..9701
                     /gene="thiB"
                     /locus_tag="JN001_000890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter substrate binding
                     subunit"
                     /protein_id="HAY9052204.1"
                     /translation="MLKKCLPLLLLCTAPVFAKPVLTVYTYDSFAADWGPGPKIKKAF
                     EADCNCELKLVALEDGVSLLNRLRMEGKNSKADVVLGLDNNLLDAASKTGLFAKSGVA
                     ADAVNVPGGWNNDTFVPFDYGYFAFVYDKNKLKNPPQSLKELVESDQNWRVIYQDPRT
                     STPGLGLLLWMQKVYGDDAPQAWQKLAKKTVTVTKGWSEAYGLFLKGESDLVLSYTTS
                     PAYHILEEKKDNYAAANFSEGHYLQVEVAARTAASKQPELAQKFLQFMVSPAFQNAIP
                     TGNWMYPVANVTLPAGFEQLTKPATTLEFTPAEVAAQRQAWISGWQRAVSR"
     gene            9677..11287
                     /gene="thiP"
                     /locus_tag="JN001_000891"
     CDS             9677..11287
                     /gene="thiP"
                     /locus_tag="JN001_000891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine/thiamine pyrophosphate ABC transporter
                     permease ThiP"
                     /protein_id="HAY9052205.1"
                     /translation="MATRRQPLIPGWLIPGVSAATLVVAVALAAFLALWWNAPQGNWV
                     AVWQDSYLWHVVRFSFWQAFLSALLSVVPAIFLARALYRRRFPGRLALLRLCAMTLIL
                     PVLVAVFGILSVYGRQGWLASLCQSLGLEWTFSPYGLQGILLAHVFFNLPMASRLLLQ
                     ALENIPDEQRQLAAQLGMRGWHFFRFVEWPWLRRQIPPVAALIFMLCFASFATVLSLG
                     GGPQATTIELAIYQALSYDYDPARAAMLALIQMVCCLGLVLLSQRLSKAIAPGTTLLQ
                     GWRDPDDRLHSRICDTVLIVLALLLLLPPLLAVIVDGVNRQLPEVLAQPVLWQALWTS
                     LRIALAAGVLCVVLTMMLLWSSRELRARQKMLAGQALEMSGMLILAMPGIVLATGFFL
                     LLNNTIGLQQSADGIVIFTNALMAIPYALKVLENPMRDITARYSMLCQSLGIEGWSRL
                     KVVELRALKRPLAQALAFACVLSIGDFGVVALFGNDDFRTLPFYLYQQIGSYRSQDGA
                     VTALILLLLCFLLFTVIEKLPGRNVKTD"
     gene            11271..11969
                     /gene="thiQ"
                     /locus_tag="JN001_000892"
     CDS             11271..11969
                     /gene="thiQ"
                     /locus_tag="JN001_000892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706019.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine ABC transporter ATP-binding protein
                     ThiQ"
                     /protein_id="HAY9052206.1"
                     /translation="MLKLTDITWLYQHLPMRFSLTVERGEQVAILGPSGAGKSTLLNL
                     IAGFLTPASGSLTIDGVDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGLGLNPGLKL
                     NAAQQEKMHAIARQMGIDNLMARLPGELSGGQRQRVALARCLVREQPILLLDEPFSAL
                     DPALRQEMLTLVSTSCQQQKMTLLMVSHSVEDAARIATRSVVVADGRIAWQGKTEELL
                     SGKASASAILGITG"
     gene            complement(12082..12846)
                     /locus_tag="JN001_000893"
     CDS             complement(12082..12846)
                     /locus_tag="JN001_000893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9052207.1"
                     /translation="MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAG
                     LGALIGSGELSFWHAWLAGIVGCLLGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTE
                     HALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGI
                     LAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLL
                     WLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV"
     gene            complement(12932..13810)
                     /gene="araC"
                     /locus_tag="JN001_000894"
     CDS             complement(12932..13810)
                     /gene="araC"
                     /locus_tag="JN001_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose operon transcriptional regulator AraC"
                     /protein_id="HAY9052208.1"
                     /translation="MAEAQNDPLLPGYSFNAHLVAGLTPIEANGYLDFFIDRPLGMKG
                     YILNLTIRGQGVVKNQGREFVCRPGDILLFPPGEIHHYGRHPEAREWYHQWVYFRPRA
                     YWHEWLNWPSIFANTGFFRPDEAHQPHFSDLFGQIINAGQGEGRYSELLAINLLEQLL
                     LRRMEAINESLHPPMDNRVREACQYISDHLADSNFDIASVAQHVCLSPSRLSHLFRQQ
                     LGISVLSWREDQRISQAKLLLSTTRMPIATVGRNVGFDDQLYFSRVFKKCTGASPSEF
                     RAGCEEKVNDVAVKLS"
     gene            14149..15849
                     /gene="araB"
                     /locus_tag="JN001_000895"
     CDS             14149..15849
                     /gene="araB"
                     /locus_tag="JN001_000895"
                     /EC_number="2.7.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulokinase"
                     /protein_id="HAY9052209.1"
                     /translation="MAIAIGLDFGSDSVRALAVDCASGEEIATSVEWYPRWQKGQFCD
                     APNNQFRHHPRDYIESMEAALKTVLAELSVEQRAAVVGIGVDSTGSTPAPIDADGNVL
                     ALRPEFAENPNAMFVLWKDHTAVEEAEEITRLCHAPGNVDYSRYIGGIYSSEWFWAKI
                     LHVTRQDSAVAQSAASWIELCDWVPALLSGTTRPQDIRRGRCSAGHKSLWHESWGGLP
                     PASFFDELDPILNRHLPSPLFTDTWTADIPVGTLCPEWAQRLGLPESVVISGGAFDCH
                     MGAVGAGAQPNALVKVIGTSTCDILIADKQSVGERAVKGICGQVDGSVVPGFIGLEAG
                     QSAFGDIYAWFGRVLGWPLEQLAAQHPELKAQINASQKQLLPALTEAWAKNPSLDHLP
                     VVLNWFNGRRTPNANQRLKGVITDLNLATDAPLLFGGLIAATAFGARAIMECFTDQGI
                     AVNNVMALGGIARKNQVIMQACCDVLNRPLQIVASDQCCALGAAIFAAVAAKVHADIP
                     SAQQKMASAVEKTLQPRSEQTQRFEQLYRRYQQWAMSAEQHYLPTSAPAQAAQAVPTL
                     "
     gene            15860..17362
                     /gene="araA"
                     /locus_tag="JN001_000896"
     CDS             15860..17362
                     /gene="araA"
                     /locus_tag="JN001_000896"
                     /EC_number="5.3.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose isomerase"
                     /protein_id="HAY9052210.1"
                     /translation="MTIFDNYEVWFVIGSQHLYGPETLRQVTQHAEHVVNALNTEAKL
                     PCKLVLKPLGTTPDEITAICRDANYDDRCAGLVVWLHTFSPAKMWINGLTMLNKPLLQ
                     FHTQFNAALPWDSIDMDFMNLNQTAHGGREFGFIGARMRQQHAVVTGHWQDKQAHERI
                     GSWMRQAVSKQDTRHLKVCRFGDNMREVAVTDGDKVAAQIKFGFSVNTWAVGDLVQVV
                     NSISDGDVNALVDEYESCYTMTPATQIHGEKRQNVLEAARIELGMKRFLEQGGFHAFT
                     TTFEDLHGLKQLPGLAVQRLMQQGYGFAGEGDWKTAALLRIMKVMSTGLQGGTSFMED
                     YTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAI
                     VASLIDLGDRYRLLVNCIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHH
                     TVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDALRWNEVYYGFRR"
     gene            17562..18257
                     /gene="araD"
                     /locus_tag="JN001_000897"
     CDS             17562..18257
                     /gene="araD"
                     /locus_tag="JN001_000897"
                     /EC_number="5.1.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY9052211.1"
                     /translation="MLEDLKRQVLEANLALPKHNLVTLTWGNVSAVDRERGVFVIKPS
                     GVDYSVMTADDMVVVSIETGEVVEGTKKPSSDTPTHRLLYQAFPSIGGIVHTHSRHAT
                     IWAQSGQSIPATGTTHADYFYGTIPCTRKMTDAEINGEYEWETGNVIVETFEKQGIDA
                     AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMEIFCRQLAPQLPDMQQTLLDKH
                     YLRKHGAKAYYGQ"
     gene            18332..20683
                     /gene="polB"
                     /locus_tag="JN001_000898"
     CDS             18332..20683
                     /gene="polB"
                     /locus_tag="JN001_000898"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase II"
                     /protein_id="HAY9052212.1"
                     /translation="MAQAGFILTRHWRDTPQGTEVSFWLATDNGPLQVTLAPQESVAF
                     IPADQVPRAQHILQGEQGFRLTPLALKDFHRQPVYGLYCRAHRQLMNYEKRLREGGVT
                     VYEADVRPPERYLMERFITSPVWVEGDMHNGTIVNARLKPHPDYRPPLKWVSIDIETT
                     RHGELYCIGLEGCGQRIVYMLGSENGDASSLDFELEYVASRPQLLEKLNAWFANYDPD
                     VIIGWNVVQFDLRMLQKHAERYRLPLRLGRDNSELEWREHGFKNGVFFAQAKGRLIID
                     GIEALKSAFWNFSSFSLETVAQELLGEGKSIDNPWDRMDEIDRRFAEDKPALATYNLK
                     DCELVTQIFHKTEIMPFLLERATVNGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLG
                     EVPPHASPGGYVMDSRPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
                     TEGFLDAWFSREKHCLPEIVTNIWHGRDEAKRQGNKPLSQALKIIMNAFYGVLGTTAC
                     RFFDPRLASSITMRGHQIMRQTKALIEAQGYDVIYGDTDSTFVWLKGAHSEEEAAKIG
                     RALVQHVNAWWAETLQKQRLTSALELEYETHFCRFLMPTIRGADTGSKKRYAGLIQEG
                     DKQRMVFKGLETVRTDWTPLAQQFQQELYLRIFRNEPYQEYVRETIDKLMAGELDARL
                     VYRKRLRRPLSEYQRNVPPHVRAARLADEENQKRGRPLQYQNRGTIKYVWTTNGPEPL
                     DYQRSPLDYEHYLTRQLQPVAEGILPFIEDNFATLMTGQLGLF"
     gene            20847..23753
                     /gene="rapA"
                     /locus_tag="JN001_000899"
     CDS             20847..23753
                     /gene="rapA"
                     /locus_tag="JN001_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001117023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-associated protein RapA"
                     /protein_id="HAY9052213.1"
                     /translation="MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYA
                     RSDSPVTRVMFNPGDTITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFL
                     DSKLVFSKPQDRLFAGQIDRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLN
                     IAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVE
                     MLRRFNLRFALFDDERYAEAQHDAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDL
                     LVVDEAHHLVWSEDAPSREYQAIEQLAEHMPGVLLLTATPEQLGMESHFARLRLLDPN
                     RFHDFAQFVEEQKNYRPVADAVAMLLAGNKLSNDELNMLGEMIGEQDIEPLLQAANSD
                     SEDAQSARQELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTIKLPLPTQYQTAIKV
                     SGIMGARKSAEDRARDMLYPERIYQEFEGDNATWWNFDPRVEWLMGYLTSHRSQKVLV
                     ICAKAATALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWFAEEDTGAQVLLCSEIG
                     SEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRIGQAHDIQIHVPYLEKTAQSVLVRW
                     YHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQTEGFDDLIKNCREQHEALKAQLE
                     QGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAMNLLDIIGINQDDRGDNMIVL
                     TPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWEHPLIRNGLDLILSGDTGS
                     STISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGNNLAAQV
                     EFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSARALIDAARNEADEKL
                     SAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDALRLIVVTHQ"
     gene            23765..24424
                     /gene="rluA"
                     /locus_tag="JN001_000900"
     CDS             23765..24424
                     /gene="rluA"
                     /locus_tag="JN001_000900"
                     /EC_number="5.4.99.28"
                     /EC_number="5.4.99.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA pseudouridine(32) synthase/23S
                     rRNA pseudouridine(746) synthase RluA"
                     /protein_id="HAY9052214.1"
                     /translation="MGMENYNPPQEPWLVILYQDDHIMVVNKPSGLLSVPGRLEEHKD
                     SVMTRIQRDYPQAESVHRLDMATSGVIVVALTKAAERELKRQFREREPKKQYVARVWG
                     HPSPAEGLVDLPLICDWPNRPKQKVCYETGKPAQTEYEVVEYAADNTARVVLKPITGR
                     SHQLRVHMLALGHPILGDRFYASPEARAMAPRLLLHAEMLTITHPAYGNSMTFKAPAD
                     F"
     gene            complement(24541..25356)
                     /gene="djlA"
                     /locus_tag="JN001_000901"
     CDS             complement(24541..25356)
                     /gene="djlA"
                     /locus_tag="JN001_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone DjlA"
                     /protein_id="HAY9052215.1"
                     /translation="MQYWGKIIGVAVALLMGGGFWGVVLGLLIGHMFDKARSRKMAWF
                     ANQRERQALFFATTFEVMGHLTKSKGRVTEADIHIASQLMDRMNLHGASRTAAQNAFR
                     VGKSDNYPLREKMRQFRSVCFGRFDLIRMFLEIQIQAAFADGSLHPNERAVLYVIAEE
                     LGISRAQFDQFLRMMQGGAQFGGGYQQQSGGGNWQQAQRGPTLEDACNVLGVKPTDDA
                     TTIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKQKAQEIQQAYELIKQQKGFK"
     gene            25611..27965
                     /gene="lptD"
                     /locus_tag="JN001_000902"
     CDS             25611..27965
                     /gene="lptD"
                     /locus_tag="JN001_000902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS assembly protein LptD"
                     /protein_id="HAY9052216.1"
                     /translation="MKKRIPTLLATMIATALYSQQGLAADLASQCMLGVPSYDRPLVQ
                     GDTNDLPVTINADHAKGDYPDDAVFTGSVDIMQGNSRLQADEVQLHQKEAPGQPEPVR
                     TVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGEN
                     RYTILDNGSFTSCLPGSDTWSVVGSEIIHDREEQVAEIWNARFKVGPVPIFYSPYLQL
                     PVGDKRRSGFLIPNAKYTTTNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEF
                     RYLSQAGAGLMELDYLPSDKVYEDEHPNDDSSRRWLFYWQHSGVMDQVWRFNVDYTKV
                     SDPSYFNDFDNKYGSSTDGYATQKFSVGYAVQNFNATVSTKQFQVFSEQNTSSYSAEP
                     QLDVNYYQNDVGPFDTRIYGQAVHFVNTRDDMPEATRVHLEPTINLPLSNNWGSINTE
                     AKLLATHYQQTNLDWYNSRNTTKLDESVNRVMPQFKVDGKMVFERDMEMLAPGYTQTL
                     EPRAQYLYVPYRDQSDIYNYDSSLLQSDYSGLFRDRTYGGLDRIASANQVTTGVTSRI
                     YDDAAVEHFNISVGQIYYFTESRTGDDNITWENDDKTGSLVWAGDTYWRISERWGLRG
                     GIQYDTRLDNVATSNSSIEYRRDEDRLVQLNYRYASPEYIQATLPKYYSTAEQYKNGI
                     SQVGAVASWPIADRWSIVGAYYYDTNANKQADSMLGVQYSSCCYAIRVGYERKLNGWD
                     NDKQHAVYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQNTL"
     gene            28018..29304
                     /gene="surA"
                     /locus_tag="JN001_000903"
     CDS             28018..29304
                     /gene="surA"
                     /locus_tag="JN001_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase SurA"
                     /protein_id="HAY9052217.1"
                     /translation="MKNWKTLLLGIAMIANTSFAAPQVVDKVAAVVNNGVVLESDVDG
                     LMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIAN
                     IAKQNNMTLDQMRSRLAYDGLNYNTYRNQIRKEMIISEVRNNEVRRRITILPQEVESL
                     AQQVGNQNDASTELNLSHILIPLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIA
                     HSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGE
                     SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGS
                     ANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDKTDAA
                     QKDRAYRMLMNRKFSEEAASWMQEQRASAYVKILSN"
     gene            29304..30293
                     /gene="pdxA"
                     /locus_tag="JN001_000904"
     CDS             29304..30293
                     /gene="pdxA"
                     /locus_tag="JN001_000904"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HAY9052218.1"
                     /translation="MVKTQRVVITPGEPAGIGPDLVVQLAQREWPVELVVCADATLLT
                     DRAAMLGLPLTLRPYSPNSPAQPQTAGTLTLLPVALRESVTAGQLAIENGHYVVETLA
                     RACDGCLNGEFAALITGPVHKGVINDAGIPFTGHTEFFEERSQAKKVVMMLATEELRV
                     ALATTHLPLRDIADAITPALLHEVIAILHHDLRTKFGIAEPRILVCGLNPHAGEGGHM
                     GTEEIDTIIPVLDELRAQGMILNGPLPADTLFQPKYLDNADAVLAMYHDQGLPVLKYQ
                     GFGRGVNITLGLPFIRTSVDHGTALELAGRGEADVGSFITALNLAIKMIVNTQ"
     gene            30290..31111
                     /gene="rsmA"
                     /locus_tag="JN001_000905"
     CDS             30290..31111
                     /gene="rsmA"
                     /locus_tag="JN001_000905"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HAY9052219.1"
                     /translation="MNNRVHQGHLARKRFGQNFLNDQFVIDSIVSAINPQKGQAMVEI
                     GPGLAALTEPVGERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAE
                     KMGQPLRVFGNLPYNISTPLMFHLFSYTDAIADMHFMLQKEVVNRLVAGPNSKAYGRL
                     SVMAQYYCNVIPVLEVPPSAFTPPPKVDSAVVRLVPHATMPHPVKDVRVLSRITTEAF
                     NQRRKTIRNSLGNLFSVEVLTGMGIDPAMRAENISVAQYCQMANYLAENAPLQES"
     gene            31114..31491
                     /gene="apaG"
                     /locus_tag="JN001_000906"
     CDS             31114..31491
                     /gene="apaG"
                     /locus_tag="JN001_000906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HAY9052220.1"
                     /translation="MINSPRVCIQVQSVYIEAQSSPDNERYVFAYTVTIRNLGRAPVQ
                     LLGRYWLITNGNGRETEVQGEGVVGVQPLIAPGEEYQYTSGAIIETPLGTMQGHYEMI
                     DENGVPFSIDIPVFRLAVPTLIH"
     gene            31498..32340
                     /gene="apaH"
                     /locus_tag="JN001_000907"
     CDS             31498..32340
                     /gene="apaH"
                     /locus_tag="JN001_000907"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase
                     (symmetrical)"
                     /protein_id="HAY9052221.1"
                     /translation="MATYLIGDVHGCYDELIALLHKVEFTPGKDTLWLTGDLVARGPG
                     SLDVLRYVKSLGDSVRLVLGNHDLHLLAVFAGISRNKPKDRLTPLLEAPDADELLNWL
                     RRQPLLQIDEEKKLVMAHAGITPQWDLQTAKECARDVEAVLSSDSYPFFLDAMYGDMP
                     NNWSPELRGLGRLRFITNAFTRMRFCFPNGQLDMYSKESPEEAPAPLKPWFAIPGPVA
                     EEYSIAFGHWASLEGKGTPEGIYALDTGCCWGGTLTCLRWEDKQYFVQPSNRHKDLGE
                     AAAS"
     gene            complement(32418..32897)
                     /gene="folA"
                     /locus_tag="JN001_000908"
     CDS             complement(32418..32897)
                     /gene="folA"
                     /locus_tag="JN001_000908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 dihydrofolate reductase"
                     /protein_id="HAY9052222.1"
                     /translation="MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGR
                     HTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQ
                     FLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR"
     gene            complement(33089..34951)
                     /gene="kefC"
                     /locus_tag="JN001_000909"
     CDS             complement(33089..34951)
                     /gene="kefC"
                     /locus_tag="JN001_000909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefC"
                     /protein_id="HAY9052223.1"
                     /translation="MDSHTLIQALIYLGSAALIVPIAVRLGLGSVLGYLIAGCIIGPW
                     GLRLVTDAESILHFAEIGVVLMLFIIGLELDPQRLWKLRAAVFGGGALQMVICGGLLG
                     LFCMLLGLRWQVAELIGMTLALSSTAIAMQAMNERNLMVTQMGRSAFAVLLFQDIAAI
                     PLVAMIPLLATSSASTTMGAFALSALKVAGALVLVVLLGRYVTRPALRFVARSGLREV
                     FSAVALFLVFGFGLLLEEVGLSMAMGAFLAGVLLASSEYRHALESDIEPFKGLLLGLF
                     FIGVGMSIDFGTLLENPLRIVILLLGFLIIKIAMLWLIARPLQVPNKQRRWFAVLLGQ
                     GSEFAFVVFGAAQMANVLEPEWAKSLTLAVALSMAATPILLVILNRLEQSSTEEAREA
                     DEIDEEQPRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDA
                     TRMDLLESAGAAKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQ
                     AGVEKPERETFEGALKTGRLALESLGLGPYEARERADVFRRFNIQMVEEMAMVENDTK
                     ARAAVYKRTSAMLSEIITEDREHLSLIQRHGWQGTEEGKHTGNMADEPETKPSS"
     gene            complement(34944..35474)
                     /gene="kefF"
                     /locus_tag="JN001_000910"
     CDS             complement(34944..35474)
                     /gene="kefF"
                     /locus_tag="JN001_000910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     oxidoreductase KefF"
                     /protein_id="HAY9052224.1"
                     /translation="MILIIYAHPYPHHSHANKRMLEQARTLEGVEIRSLYQLYPDFNI
                     DIAAEQEALSRADLIVWQHPMQWYSIPPLLKLWIDKVLSHGWAYGHGGKALHGKHLLW
                     AVTTGGGESHFEIGAHPGFDVLSQPLQATAIYCGLNWLPPFAMHCTFICDDETLEGQA
                     RHYKQRLLEWQEAHHG"
     gene            complement(35556..>36829)
                     /locus_tag="JN001_000911"
     CDS             complement(35556..>36829)
                     /locus_tag="JN001_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005116114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052225.1"
                     /translation="DGYVLVMIGVALEQLTPALKLDADWIGLLGAGTLAGLFVGTSLF
                     GYISDKVGRRKMFLIDIIAIGVISVATMFVSSPVELLVMRVLIGIVIGADYPIATSMI
                     TEFSSTRQRAFSISFIAAMWYVGATCADLVGYWLYDVEGGWRWMLGSAAIPCLLILIG
                     RFELPESPRWLLRKGRVKECEEMMIKLFGEPVAFDEEQPQQTRFRDLFNRRHFPFVLF
                     VAAIWTCQVIPMFAIYTFGPQIVGLLGLGVGKNAALGNVVISLFFMLGCIPPMLWLNT
                     AGRRPLLIGSFAMMTLALAVLGLIPDMGIWLVVMAFAVYAFFSGGPGNLQWLYPNELF
                     PTDIRASAVGVIMSLSRIGTIVSTWALPIFINNYGISNTMLMGAGISLFGLLISVAFA
                     PETSRDVIGANQQYDDPRAENGVNCSDFSLF"
BASE COUNT         8961 a        10084 c         9691 g         8093 t
ORIGIN      
        1 catgcatata aaataagaaa aagcaaaatg agtaaaattc ggaaaacata aagatacggg
       61 ttctgataaa aacagaatcc attgccgtgg aatgagtcat ttaccacagc ataataatcc
      121 ataatgtttt tgttgcgaaa acaatctaat cataactacc gcgaatactc aatcatctac
      181 aaaatggatt aaatgtgctt atttaataat taatttatat atttaatgca ttaattatta
      241 acattaatgg atcaataata ttcaccatat caatatcaaa aaaaaaattc gcaaaacata
      301 taattcaata caaatcatca ggataggttt tgcaacgcgt gcattttgtc ccctttttcc
      361 tcgttgatta gatgcaaaaa tttattctga aatatgtcaa cctatgaaaa gtgtcggtcg
      421 ttaaacagaa attaatatcg cttgctttaa ccaccgcagc acaattagct aattttacgg
      481 atgcagaact cgcgctggcg ggacgttttt attgcgtcag ggttgacatc cgtttttgta
      541 tccagtaact ctaaaagcat atcgcattca tctggagctg atttaatgac tcacatcgtt
      601 cgctttatcg gtctactact actaaacgca tcttctttgc gcggtagacg agtgagcggc
      661 atccagcatt aagccagcac gcagtcaaac aaaaaacccg cgccattgcg cgggtttttt
      721 tatgcccgaa gcgaggcgct ctaaaagaga caaggaccca aaccatgagc cagcaagtca
      781 ttattttcga taccacattg cgcgacggtg aacaggcgtt acaggcaagc ttgagtgtga
      841 aagaaaaact gcaaattgcg ctggcccttg agcgtatggg tgttgacgtg atggaagtcg
      901 gtttccccgt ctcttcgccg ggcgattttg aatcagtgca aaccatcgcc cgccaggtta
      961 aaaacagccg cgtatgcgcg ttagctcgct gcgtggagaa agatatcgac gtggcggccg
     1021 aatccctgaa agtcgccgaa gccttccgta ttcatacctt tattgccact tcgccaatgc
     1081 acatcgccac caagctgcgc agcacgctgg atgaagtgat cgaacgcgct atctatatgg
     1141 tgaaacgcgc ccgtaattac accgatgatg ttgaattttc ttgcgaagat gccgggcgta
     1201 cccccattgc cgatctggcg cgagtggtcg aagcggcgat taatgccggt gccaccacca
     1261 tcaacattcc ggacaccgtg ggctacacca tgccgtttga gttcgccgga atcatcagcg
     1321 gtctgtatga acgcgtacct aacatcgaca aagccattat ttccgtacat acccacgacg
     1381 atttaggcct ggcggtcggc aactcactgg cggcggtaca tgccggtgca cgccaggtgg
     1441 aaggtgcaat gaacgggatc ggcgagcgtg ccggtaactg ttcgctggaa gaagtcatca
     1501 tggcgattaa agttcgtaag gatattctca acgtccacac cgccattaat caccaggaga
     1561 tatggcgcac cagccagtta gttagccaga tttgtaatat gccgatcccg gcaaacaaag
     1621 ccattgttgg cagcggcgca ttcgcccact cctccggtat ccaccaggat ggcgtgctga
     1681 aaaaccgcga aaactacgaa atcatgacac cagaatctat tggtctgaac caaatccagc
     1741 tgaatctgac ctctcgttcg gggcgtgcgg cggtgaaaca tcgcatggat gagatggggt
     1801 ataaagaaag tgaatataat ttagacaatt tgtacgatgc tttcctgaag ctggcggaca
     1861 aaaaaggtca ggtgtttgat tacgatctgg aggcgctggc cttcatcggt aagcagcaag
     1921 aagagccgga gcatttccgt ctggattact tcagcgtgca gtctggctct aacgatatcg
     1981 ccaccgccgc cgtcaaactg gcctgtggcg aagaagtcaa agcagaagcc gccaacggta
     2041 acggtccggt cgatgccgtc tatcaggcaa ttaaccgcat cactgactat aacgtcgaac
     2101 tggtgaaata cagcctgacc gccaaaggtc acggtaaaga tgcgctgggt caggtggata
     2161 ttgtcgccaa ctacaacggt cgccgcttcc acggcgtcgg cctggccacc gatattgtcg
     2221 agtcctccgc caaagccatg gtgcacgtac tgaacaatat ctggcgtgcc gcagaagtcg
     2281 aaaaagagtt gcaacgcaaa gctcaacaca acgaaaacaa caaggaaacc gtgtgatgtc
     2341 gaagaattac catattgccg tattgccggg ggacggtatt ggtccggaag tgatgaccca
     2401 ggcgctgaaa gtgctggatg ccgtgcgcaa ccgctttgcg atgcgcatca ccaccagcca
     2461 ttacgatgta ggcggcgcag ccattgataa ccacgggcaa ccactgccgc ctgcgacggt
     2521 tgaaggttgt gagcaagccg atgccgtgct gtttggctcg gtaggcggtc cgaaatggga
     2581 acatttacca ccagaccagc aaccagaacg cggcgcgctg ttgcctttgc gtaagcactt
     2641 caaattattc agcaacctgc gtccggcaaa actgtatcag gggctggaag cattctgtcc
     2701 gctgcgtgct gacattgccg ctaacggctt cgacatcctg tgcgtgcgcg aactgaccgg
     2761 cggcatctat ttcggtcagc caaaaggccg cgaaggtagc ggacagtatg aaaaagcgtt
     2821 tgataccgag gtgtatcacc gttttgagat cgaacgtatc gcccgcatcg cgtttgaatc
     2881 tgcccgcaag cgtcgccaca aagtcacctc aatcgacaaa gccaacgtgc tgcaatcctc
     2941 tattttatgg cgggagatcg ttaacgagat cgccacggaa tacccggatg tcgaactggc
     3001 gcatatgtac atcgacaacg ccaccatgca gctgattaaa gatccatcac agtttgacgt
     3061 cctgctgtgc tccaacctgt ttggcgacat tctgtctgac gagtgcgcaa tgatcactgg
     3121 ctcgatgggg atgttgcctt ccgccagcct gaacgagcaa ggttttggtc tgtatgaacc
     3181 ggcaggcggc tcagcaccag atatcacagg caaaaacatc gccaacccga ttgcgcaaat
     3241 tctgtcgctg gcactgctgc tgcgctacag cctggatgcc gatgatgcgg cttgcgccat
     3301 tgaacgcgcc attaaccgcg cattagaaga aggcattcgc accggggatt tagcccgtgg
     3361 cgctgccgcc gttagtaccg atgaaatggg cgatatcatt gcccgctatg tggcagaagg
     3421 ggtgtaatca tggctaaaac gttatacgaa aaattattcg acgctcacgt agtgtacgaa
     3481 gccgaaaacg aaaccccgct gttatatatc gaccgccacc tggtgcatga agtgacctca
     3541 ccgcaggcgt tcgatggtct gcgcgcccac ggtcgcccgg tacgtcagcc gggcaaaacc
     3601 ttcgccacta tggatcacaa cgtctctacc cagacgaaag acattaatgc ctgtggtgaa
     3661 atggcgcgca tccagatgca ggagctgatt aaaaactgca aagaatttgg cgtcgaactg
     3721 tatgacctga atcacccgta tcaggggatc gtccacgtaa tggggccgga acagggcgtc
     3781 accttgccgg ggatgaccat tgtctgcggc gactcgcata ccgccaccca cggcgcgttt
     3841 ggcgcactgg cctttggtat cggcacttcc gaagttgaac acgtactggc aacgcaaacc
     3901 ctgaaacagg gccgcgcaaa aaccatgaaa attgaagtcc agggcaaagc cgcgccgggc
     3961 attaccgcaa aagatatcgt gctggcaatt atcggtaaaa ccggtagcgc aggcggcacc
     4021 gggcatgtgg tggagttttg cggcgaagca atccgtgatt taagcatgga aggtcgtatg
     4081 accctgtgca atatggcaat cgaaatgggc gcaaaagccg gtctggttgc accggacgaa
     4141 accaccttta actatgtcaa aggccgtttg catgcgccga aaggcaaaga tttcgacgac
     4201 gccgttgcct actggaaaac cctgcaaacc gacgaaggcg caactttcga taccgttgtc
     4261 actctgcaag cagaagaaat ttcaccgcag gtcacctggg gcaccaatcc aggccaggtg
     4321 atttccgtga acgacaatat tcccgatccg gcttcgtttg ccgatccggt tgaacgcgcg
     4381 tcggcagaaa aagcgctggc ctatatgggg ctgaaaccgg gcattccgct gaccgaagtg
     4441 gctatcgaca aagtgtttat cggttcctgt accaactcgc gcattgaaga tttacgcgcg
     4501 gcagcggaga tcgccaaagg gcgaaaagtc gcgccaggcg tgcaggcact ggtggttccc
     4561 ggctctggcc aggtaaaagc ccaggcggaa gcggaaggtc tggataaaat ctttattgaa
     4621 gccggttttg aatggcgctt gcctggctgc tcaatgtgtc tggcgatgaa caacgaccgt
     4681 ctgaatccgg gcgaacgttg tgcatccacc agcaaccgta actttgaagg ccgccagggg
     4741 cgcggcgggc gcacgcatct ggtcagcccg gcaatggctg ccgctgctgc tgtgaccgga
     4801 catttcgccg acattcgcaa cattaaataa ggagcagacc atggcagaga aatttatcaa
     4861 acacacaggc ctggtggttc cgctggatgc cgccaatgtc gataccgatg caatcatccc
     4921 gaaacagttt ttgcagaaag tgacccgtac gggttttggc gcgcatctgt ttaacgactg
     4981 gcgttttctc gatgaaaaag gccaacagcc aaacccggac ttcgtgctga acttcccgca
     5041 gtatcagggc gcttccattt tgctggcacg agaaaacttc ggctgtggct cctcgcgtga
     5101 gcacgcgccc tgggcattga ccgactacgg ttttaaagtg gtgattgcgc cgagttttgc
     5161 tgacatcttc tacggcaata gctttaacaa ccagctgctg ccggtgaaat taagcgatgc
     5221 agaagtggac gaactgtttg cgctggtgaa agccaatccg gggatccatt tcgacgtgga
     5281 tctggaagcg caagaggtga aagcgggaga gaaaacctat cgctttacca tcgatgcctt
     5341 ccgccgccac tgcatgatga acggtctgga cagtattggg cttaccttgc agcacgacga
     5401 cgccattgcc gcttatgaag caaaacaacc tgcgtttatg aattaatccc cttgcccggt
     5461 caaatgaccg ggctttccgc tatcgtccac gtcatcaaac gtctttaacc tttgcggtta
     5521 aaaataatgc gacaacagaa ataaccgcaa ttacccagta gacagcaaag tgcccccaac
     5581 tttgtgcaat tgctccctga ataacgccag ccagaattac cccggtagaa atactgttag
     5641 taaataaggt ggtagctgcc cccgctcttc caggcattaa atcctgaaac catagcatcc
     5701 caatacccgc aacaatgccg ataaatacag cgttaaaaag ttgcagcgtc atcaacgcca
     5761 tacggctatg aaagaaaatc aatccggtgt aaaacagtac tcctgccgcc actgctatga
     5821 ccatcattcg ccgcttacca taacgtttga catagtagcc agccagaatc attgctggta
     5881 tttccagtcc agctgccgtc cccatcagga aacccgccag tttgtctggc aatcctaact
     5941 cgctactgat ccacaacggc atatcaataa tgtacatggt gttgcaggtc cacattaacg
     6001 tcgaggcgac aaataacatc cgtacgttac tatcctgcca gccaccttgc attgataaag
     6061 cattttccga cggcagttct acccgcgcca cagacggaag cataaatgca atcaatacca
     6121 gactgagtgt gaatatcccg gcggcaatcg aaaacatcac cacttctcgc gccgagttat
     6181 ccgcatattc ccgcgccaga gcaaataact gtggcattgc cgtattggcc agagatgcca
     6241 gaagcacacc acaggtgata agcgtcagat aatgacgatt aaatgcaaac aatggcgcat
     6301 tgccgatagc catcaaacag caaaatataa tcagttttcg ccgatcgccc tgactgtcag
     6361 aacgttttgc caaccagagg cttacgccga tcccagcaat agtattcacc gtataaaaga
     6421 gtccgatcca gaaaggttgc gcgccaacct cacgactcag aaataagctc aatgtaggag
     6481 cctgtagcgc cccggccacc cccatcataa aagcgaccag cataaatgcc gcgtaaacac
     6541 cgttcatacg gcgagccatc gtcattatcc agatcatacg ttcccttttt agcgcggcga
     6601 gaataaaaaa aaccagcagg tataatctgc tggcgggtga ttttacacca atactcagtc
     6661 acacatgatg caggcaagtc aactttcaga attgcggtca tcccactgca tcagtccttc
     6721 aagcatggtt aatcgttgtg ggacgcttaa ccaacgcaac cagcacaact tcgctgtcgc
     6781 ggtaaaatag tgctgataaa actgacgcat ggggcacctc cttgcttcat cgttaggaat
     6841 tattgactta atatagggaa aataaaattg ctgtcttttg cgcaggagtt ccccttttat
     6901 gccatctgct cgtctgcaac aacagttcat ccgcctgtgg caatgctgcg agggtaaatc
     6961 gcaggacaca acgctcaacg aactggcagc gttattgagc tgctcgcgtc gtcatatgcg
     7021 taccctgctc aacaccatgc aggatcgcgg ctggctgacg tgggaagcgg aagtcgggcg
     7081 cggtaaacgc tcgcgtctga cattcctcta taccgggctg gcgcttcagc aacagcgggc
     7141 ggaagacctg ctggagcagg atcgtatcga ccaactagtg cagttggttg gcgacaaagc
     7201 gactgtgcgg caaatgctgg tttctcatct gggccgcagc ttccgccagg ggcggcacat
     7261 cctgcgcgtg ctctactatc gtccgttgcg taatctgcta cctggcagcg cattgcgccg
     7321 ttccgaaacc catattgccc ggcaaatctt cagttcgcta acgcgcataa atgaggaaaa
     7381 tggggaactg gaagcagaca tcgcccacca ctggcagcaa atatcaccgc ttcactggcg
     7441 tttctttttg cgtccaggag tccattttca tcatggtcgt gaactggaaa tggacgacgt
     7501 gatcgcctct ttaaaacgaa tcaatacgct gccgctctat tcgcatattg cggacattgt
     7561 gtcgccgacg ccctggacgc tggatatcca tctcacgcaa ccggaccgct ggttaccgtt
     7621 actgctgggg caagttccgg cgatgatcct gccgcgcgaa tgggaaaccc tcagtaactt
     7681 tgccagccat cccatcggca ccggtccgta tgcggtgatc cgcaacacca ccaatcaact
     7741 gaaaattcag gcattcgatg acttcttcgg ttaccgggca ttaatcgatg aagttaacgt
     7801 ctgggttctg ccggaaattg ccgacgagcc agctggaggt ctgatgctaa aaggtccaca
     7861 gggtgaggaa aaagagattg aaagccgcct ggaggaaggt tgctactatt tactattcga
     7921 cagccgcacc catcgcggag cgaatcagca agtcagggac tgggtaaact atgtgctttc
     7981 tccaactaat ctggtctatt tcgctgagga acagtaccag caactgtggt tcccggctta
     8041 tggactgctc ccccgttggc accatgcccg caccataaag agcgaaaaac cggctggcct
     8101 ggaaagcctc accctgacct tttatcagga tcacagtgag catcgggtga ttgccgggat
     8161 catgcagcag attctggcaa gtcaccaggt cacgctggaa atcaaagaga tcagctacga
     8221 tcagtggcat gaaggagaga tcgagagcga tatctggctt aatagcgcca actttacgct
     8281 gccgctggat ttttcgctgt tcgcgcactt gtgcgaggtg ccgctgctcc aacactgtat
     8341 tccgatcgac tggcaagccg acgccgcccg ctggcgcaat ggcgaaatga acctggcgaa
     8401 ctggtgccag caactggtcg ccagtaaagc aatggtgccg cttatccacc actggctgat
     8461 cattcaggga caacgcagta tgcgcggcct gcgtatgaat accctcggct ggttcgattt
     8521 taaatcagcg tggtttgcgc cgccggatcc atgattgctg gtagataaca aaatcactac
     8581 actaacgccg ttctcaacgg ggtgccacgc aaacgcgtgc gctgagaaaa tacccgtcga
     8641 acctgatccg gataacgccg gcgaagggat ttgaggctcc ttctcaagtc ctttgccact
     8701 cttttttgag gtgcaaagtg ttaaaaaaat gtcttcccct gctgttgctg tgcacagcgc
     8761 ccgttttcgc taaacccgtt ctgactgttt atacctacga ttccttcgcc gccgactggg
     8821 ggcctggtcc aaagatcaaa aaagcttttg aagccgactg taactgcgaa ctgaaactgg
     8881 tggcgctgga agatggcgtt tcgcttctca accgtctacg gatggaaggc aaaaatagta
     8941 aagccgatgt ggtgctgggg ctggataaca atctgttaga cgccgccagt aaaaccggac
     9001 tatttgccaa aagcggtgtg gcagcggatg ccgttaacgt tcccggcggc tggaataatg
     9061 acactttcgt cccgtttgat tacggctatt tcgccttcgt ctatgacaag aacaaactga
     9121 aaaacccgcc gcaaagcctg aaagaattgg ttgagagcga tcaaaactgg cgggtgattt
     9181 atcaggatcc gcgcaccagt acgccggggc tgggcctgct gttgtggatg caaaaagtct
     9241 atggcgatga cgccccacaa gcctggcaaa aactggcgaa gaaaaccgtc acggtcacca
     9301 aaggctggag cgaagcctac ggcctgtttt taaaaggtga aagcgatctg gtactgagtt
     9361 acaccacctc tccggcttat cacattctcg aagagaaaaa agataactac gccgccgcga
     9421 actttagcga aggtcactat ctgcaggtgg aagtcgccgc ccgcaccgct gccagcaagc
     9481 agccggagct ggcgcaaaaa ttcctccagt ttatggtttc tccggctttt cagaatgcga
     9541 tcccaaccgg taactggatg tatccggtgg caaatgtcac gctgcctgcc gggtttgaac
     9601 aattgaccaa accggccacc acgctggagt tcacaccagc tgaagtggcg gcacaacgtc
     9661 aggcatggat tagcggatgg caacgcgccg tcagccgtta attcccggct ggttaattcc
     9721 aggtgtaagc gccgccacgc tggtggtagc ggttgcgctc gcggcgtttc tcgccctgtg
     9781 gtggaacgcg ccgcagggta actgggtggc agtctggcag gacagctacc tgtggcatgt
     9841 ggtgcgcttc tccttctggc aggcgtttct ctcggcgcta ctctctgtcg tacccgcgat
     9901 attcctcgcc cgcgccctct atcgcaggcg ctttccgggt cggctggcgc tgttgcgtct
     9961 gtgcgcaatg accttgatcc tcccggtgct ggttgctgtt ttcggcattc ttagcgtcta
    10021 tggtcgccag ggctggctgg catcgctctg ccaatcgctc ggtctggagt ggaccttttc
    10081 gccctacggc ctgcaaggta ttttgctggc gcacgtattt tttaatctgc cgatggcgag
    10141 ccgcttatta ctccaggcac tggaaaacat tcccgacgaa caacgtcagc ttgccgccca
    10201 gcttgggatg cgcggctggc attttttccg cttcgtcgaa tggccgtggt tacggcgaca
    10261 aatcccgccg gttgctgcac ttatctttat gctctgtttc gccagcttcg ccaccgtgct
    10321 atcactgggc ggcggtccgc aggcgaccac tatcgagctg gctatttatc aggcgctgag
    10381 ttacgactac gatcctgccc gcgcggcgat gctggcgctg atccagatgg tgtgttgcct
    10441 tgggctggta ctgttgagtc agcgattgag taaggccatt gcgccaggca ccacgctgct
    10501 gcaaggctgg cgcgacccgg acgatcgtct gcatagccgc atttgcgaca cggtgttaat
    10561 agtgctggcg ttgctgctgt tgttgccacc gttgctggcg gtgatcgtcg atggggtaaa
    10621 tcgccagttg ccggaagtgc tggcacaacc ggtgctgtgg caggcgctgt ggacctcgtt
    10681 gcgtattgcg ctggcggcag gtgtattgtg cgtagtgctg accatgatgc tgctatggag
    10741 cagtcgcgaa cttcgggcac ggcagaaaat gctggcgggt caggcgctgg agatgagcgg
    10801 catgttgatt ctcgccatgc cggggattgt gctggctacc ggcttctttt tactgctcaa
    10861 caacactatc ggcctgcaac aatctgctga cggcattgtg attttcacca atgcgttaat
    10921 ggcgatccct tatgcgctga aagtactgga aaacccgatg cgcgatatca ccgcccgcta
    10981 cagtatgttg tgtcagtcgc tgggcattga aggctggtcg cgcttaaaag tggtggagct
    11041 gcgcgccctg aaacgtccac tggcgcaggc gctggccttt gcctgcgtgc tgtcgattgg
    11101 tgattttggc gtggtggcgt tgttcggtaa cgatgatttc cgtaccctgc cgttttatct
    11161 ctaccagcaa attggctcct atcgcagcca ggacggcgcg gtcaccgcgt taattctgct
    11221 gctactctgt tttctgctgt ttaccgtgat tgaaaaacta ccggggcgaa atgttaaaac
    11281 tgactgatat cacctggctt taccaacatt tgccgatgcg ttttagctta acggtggaac
    11341 gcggcgagca ggtggcgatc ctcgggccaa gcggcgcagg taaaagtacc ctgctgaatt
    11401 tgattgccgg ttttctgacg ccagccagcg gttcgctgac tatcgatggc gttgatcaca
    11461 ccacgacgcc gccgtcacgc cgtccggtgt cgatgctgtt tcaggagaac aacctgttca
    11521 gccacctgac ggtcgcgcag aacatcgggc tggggcttaa tccaggattg aagctgaacg
    11581 cggcacagca ggagaaaatg cacgctatcg cccgtcagat ggggattgat aatttaatgg
    11641 cgcggttacc gggcgagctt tccggcggcc agcgacagcg cgtggcgtta gcgcgttgtc
    11701 tggtgcgcga acagccgatt ttattgctcg atgaaccgtt ctctgcgctc gatccggcgt
    11761 tacgtcagga gatgctgacg ctggtgagca cgagctgcca gcagcaaaaa atgacgctat
    11821 tgatggtgtc gcacagtgtg gaagatgcgg cgcggatcgc cacacgctcg gtggtggtcg
    11881 ccgacgggcg catcgcctgg cagggtaaga ctgaagaatt gttgagcggt aaggcgagtg
    11941 cttcggcaat attggggatt acgggttagt atgcactgtc agatgcggcg tgaacacctt
    12001 atccgaccta cggacagtgc gttttgtagg cctgataaga ccggtcagcg tcgcatcagg
    12061 caacccgcac aagacaatcc cctaaacccc aaccacttta cgcaaaatat cgatatacac
    12121 cggcatcaac gggtggcgaa ttaacaccac cagcgccacc acgccgatgg cagaaatcaa
    12181 cggcgtcagc cacaacaaac ggccgcgcga caaataatga cttaaacgat cggttgcttt
    12241 accgctgcgc cataaccgcc agcacagcca gccaccaacc cacaaaaata ccgccgtcgc
    12301 cagcagcaac catttaaact cgccgctctg cattccggct ggaatatcga tcgccgcgcc
    12361 cgccagaatc ccaggcagga agtaaaacgg tggccacagc aggcagccga taatattcgg
    12421 cgtaatgaat tttgccaccg gcagatccag cattcccgcc accattggca ccagcggacg
    12481 cgtcgggcca acaaagcgac cgaccagaat ggtgaacatg ctgtgttgat gcaacgcatg
    12541 ttcagtttta tcgagtaatg ctttgttttt cttcagaaat gaccagcgat gcaacggctt
    12601 tttaaaacgc cagcccagcc agaaggagat ccagtcgccc agcagacaac cgacaatccc
    12661 tgccagccag gcgtgccaga aacttaactc gccgctgcca atcagcgctc ccagccccgc
    12721 catcagcacc gtaccgggta gaatcaaacc gaccagcgcc agcgactcca gaaaggccac
    12781 caacaccacc gccatcaatg aatacacggt agattgggta ataaagtgtt ccagcaatgc
    12841 ttgcataatg tgcctgtcaa atggacgaag cagggattct gcaaacccta tgctactccg
    12901 tcaagccgtc aattgtctga ttcgttacca attatgacaa cttgacggct acatcattca
    12961 ctttttcttc acaaccggca cggaactcgc tcgggctggc cccggtgcat tttttaaata
    13021 cccgcgagaa atagagttga tcgtcaaaac caacattgcg accgacggtg gcgataggca
    13081 tccgggtggt gctcaaaagc agcttcgcct ggctgatacg ttggtcctcg cgccagctta
    13141 agacgctaat ccctaactgc tggcggaaaa gatgtgacag acgcgacggc gacaagcaaa
    13201 catgctgtgc gacgctggcg atatcaaaat tgctgtctgc caggtgatcg ctgatgtact
    13261 gacaagcctc gcgtacccga ttatccatcg gtggatggag cgactcgtta atcgcttcca
    13321 tgcgccgcag taacaattgc tcaagcagat ttatcgccag cagctccgaa tagcgccctt
    13381 ccccttgccc ggcgttaatg atttgcccaa acaggtcgct gaaatgcggc tggtgcgctt
    13441 catccgggcg aaagaaaccc gtattggcaa atattgacgg ccagttaagc cattcatgcc
    13501 agtaggcgcg cggacgaaag taaacccact ggtgatacca ttcgcgagcc tccggatgac
    13561 gaccgtagtg atgaatctct cctggcggga acagcaaaat atcacccggt cggcaaacaa
    13621 attctcgtcc ctgatttttc accaccccct gaccgcgaat ggtgagattg agaatataac
    13681 ctttcattcc cagcggtcgg tcgataaaaa aatcgagata accgttggcc tcaatcggcg
    13741 ttaaacccgc caccagatgg gcattaaacg agtatcccgg cagcagggga tcattttgcg
    13801 cttcagccat acttttcata ctcccgccat tcagagaaga aaccaattgt ccatattgca
    13861 tcagacattg ccgtcactgc gtcttttact ggctcttctc gctaacccaa ccggtaaccc
    13921 cgcttattaa aagcattctg taacaaagcg ggaccaaagc catgacaaaa acgcgtaaca
    13981 aaagtgtcta taatcacggc agaaaagtcc acattgatta tttgcacggc gtcacacttt
    14041 gctattccat agcattttta tccataagat tagcggatcc tacctgacgc tttttatcgc
    14101 aactctctac tgtttctcca tacccgtttt tttggatgga gtgaaacgat ggcgattgca
    14161 attggcctcg attttggcag tgattctgtg cgagctttgg cggtggactg cgccagcggt
    14221 gaagagatcg ccaccagcgt agagtggtat ccccgttggc aaaaagggca attttgtgat
    14281 gccccgaata accagttccg tcatcatccg cgtgactaca ttgagtcaat ggaagcggca
    14341 ctgaaaaccg tgcttgcaga gcttagcgtc gaacagcgcg cagctgtggt cgggattggc
    14401 gttgacagta ccggctcgac gcccgcaccg attgatgccg acggtaacgt gctggcgctg
    14461 cgcccggagt ttgccgaaaa cccaaacgcg atgttcgtat tgtggaaaga ccacactgcg
    14521 gttgaagaag cggaagagat tacccgtttg tgccacgcgc cgggcaacgt tgactactcc
    14581 cgctacattg gtggtattta ttccagcgaa tggttctggg caaaaatcct gcatgtgact
    14641 cgccaggaca gcgccgtggc gcaatctgcc gcatcgtgga ttgagctgtg cgactgggtg
    14701 ccagctctgc tttccggtac cacccgcccg caggatattc gtcgcggacg ttgcagcgcc
    14761 gggcataaat ctctgtggca cgaaagctgg ggcggcttgc cgccagccag tttctttgat
    14821 gagctggacc cgatcctcaa tcgccatttg ccttccccgc tgttcactga cacctggact
    14881 gccgatattc cggtgggcac cttatgcccg gaatgggcgc agcgtctcgg cctgcctgaa
    14941 agcgtggtga tttccggcgg cgcgtttgac tgccatatgg gcgcagttgg cgcaggcgca
    15001 cagcctaacg cactggtaaa agttatcggt acttccacct gcgacattct gattgccgac
    15061 aaacagagcg ttggcgagcg ggcagttaaa ggtatttgcg gtcaggttga tggcagcgtg
    15121 gtacctggat ttatcggtct ggaagcaggc caatcggcgt ttggtgatat ctacgcctgg
    15181 tttggtcgcg tactcggctg gccgctggaa cagcttgccg cccagcatcc ggaactgaaa
    15241 gcgcaaatca acgccagcca gaaacaactg cttccggcgc tgaccgaagc atgggccaaa
    15301 aatccgtctc tggatcacct gccggtggtg ctcaactggt ttaacggccg ccgcacaccg
    15361 aacgctaacc aacgcctgaa aggggtgatt accgatctta acctcgctac cgacgctccg
    15421 ctgctgtttg gcggtttgat tgctgccacc gcctttggcg cacgcgcaat catggagtgc
    15481 tttaccgatc aggggatcgc cgtcaataac gtgatggcgc tgggcggcat cgcgcggaaa
    15541 aaccaggtca ttatgcaggc ctgctgcgac gtgctgaatc gcccgctgca aattgttgcc
    15601 tctgaccagt gctgtgcgct cggtgcggcg atttttgctg ccgtcgccgc gaaagtgcac
    15661 gcagacatcc catcagccca gcaaaaaatg gccagtgcgg tagagaaaac cctgcaaccg
    15721 cgcagcgaac agacacaacg ctttgaacag ctttatcgcc gctatcagca atgggcgatg
    15781 agcgccgaac aacactatct tccaacttcc gccccggcac aggctgccca ggccgttccg
    15841 actctataag gacacgataa tgacgatttt tgataattat gaagtgtggt ttgtcattgg
    15901 cagccagcat ctgtatggcc cggaaaccct gcgtcaggtc acccaacatg ccgagcacgt
    15961 tgttaatgcg ctgaatacgg aagcgaaact gccctgcaaa ctggtgttga aaccgctggg
    16021 caccacgccg gatgaaatca ccgctatttg ccgcgacgcg aattacgacg atcgttgcgc
    16081 tggtctggtg gtgtggctgc acaccttctc cccggccaaa atgtggatca acggcctgac
    16141 catgctcaac aaaccgttgc tgcaattcca cacccagttt aacgcggcgc tgccgtggga
    16201 cagtatcgat atggacttta tgaacctgaa ccagactgca catggcggtc gcgagttcgg
    16261 cttcattggc gcgcgtatgc gtcagcaaca tgccgtggtt accggtcact ggcaggataa
    16321 acaagcccat gagcgtatcg gctcctggat gcgtcaggcg gtctctaaac aggatacccg
    16381 tcatctgaaa gtctgccgtt ttggcgataa catgcgtgaa gtagcggtca ccgatggtga
    16441 taaagttgcc gcacagatca agttcggttt ctccgtcaat acctgggcgg ttggcgatct
    16501 ggtgcaggtg gtgaactcca tcagcgacgg cgatgttaac gcgctggtcg atgagtacga
    16561 aagctgctac accatgacgc ctgccacaca aatccacggc gaaaaacgac agaacgtgct
    16621 ggaagcggcg cgtattgagc tggggatgaa gcgtttcctg gaacaaggtg gcttccacgc
    16681 gttcaccacc acctttgaag atttgcacgg tctgaaacag cttccaggtc tggccgtaca
    16741 gcgtctgatg cagcagggtt acggctttgc gggcgaaggc gactggaaaa ccgccgccct
    16801 gcttcgcatc atgaaggtga tgtcaaccgg tctgcagggc ggcacctcct ttatggagga
    16861 ctacacctat cacttcgaga aaggtaatga cctggtgctc ggctcccata tgctggaagt
    16921 ctgcccgtcg attgccgtag aagagaaacc gatcctcgac gttcagcatc tcggtattgg
    16981 tggtaaggac gatcctgccc gactgatctt caatacccaa accggtccag cgattgtcgc
    17041 cagcctgatt gatctcggcg atcgttaccg tctgctggtt aactgtatcg acacggtgaa
    17101 aacaccgcac tccctgccga aactgccggt ggcgaatgcg ctgtggaaag cgcaaccgga
    17161 tctgccaact gcttccgaag cgtggatcct cgctggtggc gcgcaccata ccgtcttcag
    17221 ccatgcgctg aacctcaacg atatgcgtca gttcgccgag atgcacgaca ttgaaatcac
    17281 ggtgattgat aacgacaccc gcctgccagc gtttaaagac gcactgcgct ggaacgaagt
    17341 gtattacgga tttcgtcgct aagtagccac atcaggtatg taacgcctga tgcgacgctg
    17401 acgcgtctta tctggcctac acgctgcgat tttgtaggcc ggataagcaa agcgcatccg
    17461 gcattcaacg cctgatgcga cgctggcgcg tcttatcagg cctacgcgct gcgattttgt
    17521 agaccggata agcgaagcgc atccggcacg aaggagtcaa catgttagaa gatctcaaac
    17581 gccaggtatt agaagccaac ctggcgctgc caaaacacaa cctggtcacg ctcacatggg
    17641 gcaacgtcag cgccgttgat cgcgagcgcg gcgtctttgt gatcaaacct tccggcgtcg
    17701 attacagcgt catgaccgct gacgatatgg tcgtggttag catcgaaaca ggtgaagtgg
    17761 ttgaaggtac gaaaaagccc tcctccgaca cgccaactca ccggctgctc tatcaggcat
    17821 tcccctccat tggcggcatt gtgcatacgc actcgcgcca cgccaccatc tgggcgcagt
    17881 cgggtcagtc gattccagca accggcacca cccacgccga ctatttctac ggcaccattc
    17941 cctgcacccg caaaatgacc gacgcagaaa tcaacggcga atatgagtgg gaaaccggta
    18001 acgtcatcgt agaaaccttt gaaaaacagg gtatcgatgc agcgcaaatg cccggcgttc
    18061 tggtccattc ccacggcccg tttgcatggg gcaaaaatgc cgaagatgcg gtgcataacg
    18121 ccatcgtgct ggaagaggtc gcttatatgg agatattctg ccgtcagtta gcgccgcagt
    18181 taccggatat gcagcaaacg ctgctggata aacactatct gcgtaagcat ggcgcgaagg
    18241 catattacgg gcagtaatga ctgtataaaa ccacagccaa tcaaacgaaa ccaggctata
    18301 ctcaagcctg gttttttgat ggattttcag cgtggcgcag gcaggtttta tcttaacccg
    18361 acactggcgg gacaccccgc aagggacaga agtctccttc tggctggcga cggacaacgg
    18421 gccgttgcag gttacgcttg caccgcaaga gtccgtggcg tttattcccg ccgatcaggt
    18481 tccccgcgct cagcatattt tgcagggtga acaaggcttt cgcctgacac cgctggcgtt
    18541 aaaggatttt caccgccagc cggtgtatgg cctttactgt cgcgcccatc gccaattgat
    18601 gaattacgaa aagcgcctgc gtgaaggtgg cgttaccgtc tacgaggccg atgtgcgccc
    18661 gccagaacgc tatctgatgg agcggtttat cacctcaccg gtgtgggtcg agggtgatat
    18721 gcacaatggc actatcgtta atgcccgtct gaaaccgcat cccgactatc gtccgccgct
    18781 caagtgggtt tctatagata ttgaaaccac ccgccacggt gagctgtact gcatcggcct
    18841 ggaaggctgc gggcagcgca tcgtttatat gctggggtcg gagaatggcg acgcctcctc
    18901 gcttgatttc gaactggaat acgtcgccag ccgcccgcag ttgctggaaa aactcaacgc
    18961 ctggtttgcc aactacgatc ctgatgtgat catcggttgg aacgtggtgc agttcgatct
    19021 gcgaatgctg caaaaacatg ccgagcgtta ccgtcttccg ctgcgtcttg ggcgcgataa
    19081 tagcgagctg gagtggcgcg agcacggctt taaaaacggc gtcttttttg cccaggctaa
    19141 aggtcggcta attatcgacg gtatcgaggc gctgaaatcc gcgttctgga atttctcttc
    19201 attctcgctg gaaactgtcg ctcaggagct attaggcgaa ggaaaatcta tcgataaccc
    19261 gtgggatcga atggacgaaa ttgaccgccg tttcgccgaa gataaacctg cgctggcaac
    19321 ttataacctg aaagattgcg agctggtgac gcagatcttc cacaaaactg aaatcatgcc
    19381 atttttactc gaacgggcaa cggtgaacgg cctgccggtg gaccgacacg gcggttcggt
    19441 ggcggcattt ggtcatctct attttccgcg aatgcatcgc gctggttatg tcgcgcctaa
    19501 tctcggcgaa gtgccgccgc acgccagccc tggcggctac gtgatggatt cacggccagg
    19561 gctttatgat tcagtgctgg tgctggacta taaaagcctg tacccgtcga tcatccgcac
    19621 ctttctgatt gatcccgtcg ggctggtgga aggcatggcg cagcctgatc cagagcacag
    19681 taccgaaggt tttctcgatg cctggttctc gcgagaaaaa cattgcctgc cggagattgt
    19741 gactaacatc tggcacgggc gcgatgaagc caaacgccag ggtaacaaac cgctgtcgca
    19801 ggcgctgaaa atcatcatga atgcctttta tggcgtgctc ggcaccaccg cctgccgctt
    19861 cttcgatccg cggctggcat cgtcgatcac catgcgtggt catcagatca tgcggcaaac
    19921 caaagcgttg attgaagcac agggctacga cgttatctac ggcgataccg actcaacgtt
    19981 tgtctggctg aaaggcgcac attcggaaga agaagcggcg aaaatcggtc gtgcactggt
    20041 gcagcacgtt aacgcctggt gggcggaaac gctgcaaaaa caacggctga ccagcgcatt
    20101 agaactggag tatgaaaccc atttctgccg ttttctgatg ccaaccattc gcggagccga
    20161 taccggcagt aaaaagcgct acgccgggct gattcaggag ggcgataaac agcggatggt
    20221 gtttaaaggg ctggaaaccg tgcgcaccga ctggacgccg ctggcccagc agtttcagca
    20281 ggagctatac ctgcgcatct tccgcaacga gccatatcag gaatatgtac gcgaaaccat
    20341 cgacaaactg atggcgggtg aactggatgc gcgactggtt taccgtaaac gccttcgccg
    20401 tccgctgagc gagtatcagc gtaatgtgcc gcctcatgta cgcgccgctc gccttgccga
    20461 tgaagaaaac caaaagcgtg gtcgcccctt gcaatatcag aatcgcggca ccattaagta
    20521 cgtatggacc accaacggcc cggagccgct ggactaccaa cgttcaccac tggattacga
    20581 acactatctg acccgccagc tacaacccgt ggcggaggga atactccctt ttattgagga
    20641 taattttgct acacttatga ccgggcaact tgggctattt tgagcaaaaa aagagttcgc
    20701 cagataccat tttgatgcgt gacgaatgct ttgccatcca gtaccatagc gccctttcca
    20761 ttcctggacc tgaataacac cactacctca taagcacggt agcgggtggt tattgcctgc
    20821 aattaaagat atagagccga acacatatgc cttttacact tggtcaacgc tggatcagcg
    20881 atacagaaag cgaattggga cttggaaccg ttgtcgcggt ggatgcgcga actgtcactt
    20941 tacttttccc atctactggt gaaaaccgtc tgtacgcacg cagtgattcc cccgtgaccc
    21001 gcgtgatgtt caaccctggt gataccatta ccagccatga cggctggcag atgcaagtcg
    21061 aagaagtaaa agaagaaaat ggcttgctga cctatatcgg tactcgcctg gatactgaag
    21121 agtccggcgt agccctgcgt gaagttttcc ttgatagcaa actggtgttc agcaaaccgc
    21181 aggaccgcct gtttgccggg cagattgacc gtatggaccg ctttgcgctg cgttatcgcg
    21241 cgcgtaagta ttccagcgaa cagttccgta tgccgtacag cggcctgcgc ggtcagcgta
    21301 ccagcctgat cccgcaccag ctcaacatcg ctcatgatgt tggccgccgc cacgcgccgc
    21361 gcgtcctgct ggctgacgaa gtgggtttag ggaaaaccat tgaagccggg atgatcctgc
    21421 atcagcaact gctctctggc gctgctgaac gtgtgctgat tatcgtcccg gaaaccttac
    21481 agcatcagtg gctggtagaa atgctgcgcc gtttcaacct gcgctttgct ctgtttgatg
    21541 atgagcgtta tgccgaagct cagcacgatg cttacaaccc gttcgacacc gaacagctgg
    21601 tgatttgctc gctggatttt gcccgtcgta gcaaacagcg cctggaacat ctctgtgaag
    21661 ccgaatggga cctgctggtg gtcgatgaag cgcatcacct ggtgtggagc gaagatgcgc
    21721 caagccgtga atatcaggcc attgaacaac tggcagagca catgccgggc gttctgctgc
    21781 tgaccgcgac cccggaacag ctggggatgg aaagccactt cgcccgtctg cgtctgctgg
    21841 acccgaaccg tttccacgat tttgcgcagt tcgttgaaga gcagaaaaat tatcgtccgg
    21901 ttgcggacgc cgttgccatg ctgctggcag gtaacaaact gagcaatgac gaactgaaca
    21961 tgctcggcga gatgatcggc gagcaggata tcgagccgct gttgcaggca gcaaacagcg
    22021 acagcgaaga tgcccagagc gcccgtcagg agctggtttc gatgctgatg gatcgccacg
    22081 gcaccagccg cgtgctgttc cgtaacacgc gtaacggtgt gaaaggattc ccgaaacgcg
    22141 agctgcacac cattaagctg ccgctaccga cgcagtatca gacggctatt aaagtctccg
    22201 gcattatggg cgcacgtaaa agtgcggaag atcgtgctcg cgatatgctc tacccggagc
    22261 gtatttatca ggaatttgaa ggtgataacg ccacctggtg gaacttcgat ccgcgcgttg
    22321 agtggctgat gggctacctg accagccatc gctctcagaa agtgctggtg atctgcgcca
    22381 aagctgccac tgcgctgcaa ctggagcagg tactgcgcga acgtgaaggt attcgcgctg
    22441 cggtgttcca cgaaggtatg tcgattatcg aacgtgaccg cgctgccgcc tggtttgccg
    22501 aagaagacac cggcgcacag gtactgctgt gctcagaaat cggttctgaa ggacgtaact
    22561 tccagttcgc cagccacatg gtgatgtttg acctgccatt caacccggat ctactggagc
    22621 agcgtattgg tcgtctggat cgtatcggcc aggcgcacga tattcagatc catgtgcctt
    22681 atctggagaa aaccgctcag tcggtgctgg tgcgctggta tcacgaaggt ctggatgcat
    22741 ttgagcacac ctgcccgacc ggacgcacta tttacgatag cgtatacaac gatctgatta
    22801 actatctggc ttcaccggat caaaccgaag gctttgacga tctgatcaaa aactgccgcg
    22861 agcaacatga agcgctgaaa gcacagctgg aacagggtcg tgaccgcctg ctggaaatcc
    22921 actccaacgg tggcgaaaaa gcccaggcac tggcagaaag cattgaagag caggatgacg
    22981 ataccaacct gatcgccttc gccatgaacc tgctcgatat tatcggtatc aatcaggacg
    23041 atcgcggcga caacatgatc gtgctgacgc cgtccgatca tatgctggtg ccggacttcc
    23101 ctggcctgtc ggaagatggc atcaccatca cctttgatcg tgaagtggcg ctggcgcgtg
    23161 aagatgcaca gtttattacc tgggagcatc cgctgatccg caacggtctg gatctgatcc
    23221 tttctggcga taccggtagc agcacgattt cactgttaaa aaacaaagcg ttgccggtag
    23281 gtacgctgtt ggtggaactg atttatgtgg ttgaagccca ggctccgaag cagttgcagc
    23341 tcaaccgctt cctgccaccg acgccggtac gtatgctgct ggataaaaac ggcaacaacc
    23401 tggcggcgca ggtagagttt gaaaccttta accgccagct taacgcggtt aaccgtcaca
    23461 ccggcagcaa actggttaac gccgtgcagc aggatgttca cgctatcctt caactgggtg
    23521 aagcgcagat cgagaaatct gcccgtgcat tgattgatgc agcgcgtaac gaagccgacg
    23581 aaaaactgtc tgccgagctg tctcgtctgg aagctctgcg tgcagtgaac ccgaacattc
    23641 gtgacgacga actgaccgcc attgagagca accgtcagca ggtaatggaa agcctggatc
    23701 aggcaggttg gcgtctggat gccctgcgtt tgatcgttgt aacgcatcag taacggagcc
    23761 gaaaatgggg atggaaaact acaatccacc gcaggaaccc tggttggtta tcctgtatca
    23821 ggatgaccac attatggtgg ttaacaagcc gagcggtttg ttgtctgtgc cggggcgtct
    23881 ggaagagcac aaagacagcg tgatgacgcg cattcagcgt gattatccgc aggcagaatc
    23941 ggtgcatcgt ctggatatgg ctaccagcgg cgtgattgta gtggcgctga ccaaagccgc
    24001 ggagcgggag ttaaaacgcc agttccgcga gcgcgagccg aaaaagcagt atgtggcccg
    24061 cgtctggggg catccatccc ctgcggaagg tctggtggat ctgccgctga tttgcgactg
    24121 gccaaaccgc ccgaaacaga aagtctgtta cgaaacgggt aaacctgcgc agacggaata
    24181 tgaagtggtg gagtatgcgg cggataacac ggcaagagtg gtgttaaaac cgattactgg
    24241 gcgttcgcat caattgcgtg tgcatatgct ggcgctgggg catccgattc tcggcgatcg
    24301 tttttatgca tcaccagaag cgagagcgat ggcaccgcgt ttgttgctac atgcagagat
    24361 gttgacgatt acccatccgg cgtatggcaa tagtatgacg tttaaagcgc cagcggattt
    24421 ttaatagtca cgctggcgca gttcggtagg cggataaggc gttcacgccg aatccggcaa
    24481 ttgtgcgccg attgcctgat gcgacgcggg ccgcgtctta tcaggcctac agtttaaaac
    24541 ttatttaaac cctttctgct gctttatcag ctcatatgcc tgctgaattt cctgcgcttt
    24601 ctgcttcgcc atctccatca tctcaggcgg caaacctttc gccaccagct tatcgggatg
    24661 gtgttcactc atcagcttac ggtaggctcg tttaatggtg gtcgcatcat ccgtcggctt
    24721 cacacccagc acattacagg catcttccag cgtcgggcca cgctgcgctt gctgccagtt
    24781 accaccgcca gattgctgct gataaccgcc gccaaactgt gcaccgccct gcatcatgcg
    24841 caaaaactgg tcaaactggg cgcgggagat ccctaattct tctgcaatga catacagcac
    24901 cgcccgttca ttcgggtgca gtgaaccatc agcaaacgcc gcctgaatct ggatctccag
    24961 aaacatacga attaagtcaa aacgaccaaa gcagacactg cgaaactggc gcatcttttc
    25021 gcgcagcggg taattgtctg attttcccac ccggaacgcg ttttgcgccg cagtacggga
    25081 agcgccatga aggttcattc ggtccatcag ctggctggcg atatgaatat cagcctccgt
    25141 gacgcgacct ttggatttgg ttaaatgccc catcacttca aaagtggtgg caaaaaacag
    25201 cgcctgacgc tcacgctggt tggcgaacca cgccatttta cggctacggg ctttatcaaa
    25261 catatggcca attaacaggc ctaacactac gccccaaaag ccgccgccca tcagtaaggc
    25321 cacggccacg ccaatgattt ttccccaata ctgcatatat tccccaaatc gacacacgga
    25381 tatcagggct atctcccaca atataaaggt gcttttaccg ttttccggct gcagtcaatt
    25441 gtgggacatc gcctataatt tgcattatca tacctgtcat tcaatgccgt gcctaacacc
    25501 actgacgcta ttcggacagg attaacacta gcgtagagat gacgagtacg ttagtctctg
    25561 accgtttgtc acgcgcaacg ttaccgatga tggaacaata aaatcaacgt atgaaaaaac
    25621 gtatccccac tctcctggcc accatgattg ccaccgccct ttatagtcaa cagggactgg
    25681 cagccgacct cgcctcacag tgcatgttgg gcgtgccaag ctatgaccgt cctctggtac
    25741 agggcgatac caatgactta cccgtgacta tcaatgctga ccacgcgaaa ggggactacc
    25801 cggatgacgc cgtgtttact ggcagcgtgg atatcatgca gggtaacagc cgtctgcagg
    25861 ccgacgaagt gcagctccat caaaaagagg caccaggaca accggagccg gtacgaaccg
    25921 ttgatgcgct cggtaatgtc cattacgacg ataaccaggt gatcctcaaa gggccgaaag
    25981 gctgggcgaa tctgaacacc aaagatacca acgtctggga aggtgattac cagatggtgg
    26041 gtcgccaggg ccgcggtaaa gcggacctga tgaaacaacg tggtgaaaac cgctatacca
    26101 ttctggataa cggtagcttt acctcctgtc tgccgggttc tgacacctgg agcgtggtag
    26161 gtagcgaaat tattcatgac cgcgaagaac aagttgcgga gatctggaac gcccgcttta
    26221 aggtgggtcc agtaccgatc ttttatagcc cctatttgca gttgccggtg ggtgacaaac
    26281 gtcgctctgg tttcttgatc ccgaacgcca agtacaccac caccaactac tttgagttct
    26341 acctgccata ttactggaac atcgcgccaa atatggatgc caccatcacg ccgcattata
    26401 tgcatcgtcg tggcaacatc atgtgggaga acgaattccg ctacctctcc caggcgggcg
    26461 ctggcttgat ggaactggac tatctgcctt cagataaagt ctatgaagat gaacacccga
    26521 acgatgacag ttcacgtcgt tggttgttct actggcaaca ttccggggtc atggatcaag
    26581 tgtggcgttt caacgtagac tacaccaagg tcagcgatcc tagctacttc aatgatttcg
    26641 ataacaagta cggttccagt actgacggct acgcaacgca aaaattcagc gttggctatg
    26701 cggtgcaaaa cttcaatgcc accgtttcaa ccaagcagtt ccaggtcttt agcgagcaga
    26761 acaccagtag ctactcggca gagccgcagt tagacgttaa ctactaccag aatgatgttg
    26821 gtccgtttga tacgcgtatt tacggccagg cagtgcactt tgttaacacc agagacgaca
    26881 tgcctgaagc aacccgtgtt cacctggaac cgaccatcaa tttgccgctc tctaataact
    26941 ggggcagcat caataccgaa gcgaagttgc tggcaaccca ttatcagcaa accaatcttg
    27001 actggtataa ctccagaaac acgaccaagc tggacgaatc cgttaaccgc gttatgccgc
    27061 aattcaaagt tgacggcaaa atggtctttg aacgcgatat ggaaatgctg gctccgggtt
    27121 atacccaaac gctggaaccg cgcgcgcagt atttgtacgt gccgtatcgc gatcagagcg
    27181 acatctataa ctacgactcg tctctactgc aatctgacta ctctggcctg ttccgggacc
    27241 ggacttacgg cggtcttgac cgtattgcct ccgctaacca ggtgacgacc ggtgtcacat
    27301 ctcgcatata tgatgatgct gccgttgaac attttaatat ttccgttggt caaatctact
    27361 atttcacgga gtctcgcact ggcgatgaca acataacatg ggagaatgac gacaaaacgg
    27421 gctcactggt gtgggcaggc gatacttact ggcgtatctc cgagcgttgg ggattgcgtg
    27481 gcgggattca gtacgataca cgtctggata acgtagcgac cagtaactcc agcattgaat
    27541 accgtcggga tgaagaccgt ctggtacagc tgaattaccg ttacgccagc ccggaatata
    27601 ttcaggctac gctgcctaag tactattcca ctgctgagca atataagaat ggtatttcgc
    27661 aggtaggtgc tgtcgccagc tggccaattg ccgatcgttg gtccattgtt ggggcctact
    27721 actacgacac caatgcgaac aagcaagccg actctatgtt aggtgtgcaa tacagctcct
    27781 gctgctatgc aattcgcgtc ggttacgagc ggaagctgaa cggttgggat aacgataaac
    27841 aacatgcggt atatgacaac gcaatcggct ttaacatcga acttcgcggc ctgagctcca
    27901 actacggtct gggtacgcaa gagatgctgc gttcgaacat tctgccgtat caaaacactt
    27961 tgtgatttgt tgatttacca cgtaatccgc agtgcggtta attgaaatgg aaaaagtatg
    28021 aagaactgga aaacgctgct tctcggtatc gccatgatcg cgaataccag tttcgctgcc
    28081 ccccaggtag tcgataaagt cgcagccgtc gtcaataacg gcgtcgtgct ggaaagcgac
    28141 gttgatggat taatgcagtc ggtaaaactg aacgctgcgc aggcaaggca gcagcttcct
    28201 gatgacgcga cgctgcgcca ccaaatcatg gaacgtttga tcatggatca aatcatcctg
    28261 cagatggggc agaaaatggg agtgaaaatc tccgatgagc agctggatca ggcgattgct
    28321 aacatcgcga aacagaacaa catgacgctg gatcagatgc gcagccgtct ggcttacgat
    28381 ggtctgaact acaacaccta tcgtaaccag atccgcaaag agatgattat ctctgaagtg
    28441 cgtaacaacg aggtgcgtcg tcgcatcacc atcctgccgc aggaagtcga atccctggcg
    28501 cagcaggtgg gtaaccaaaa cgacgccagc actgagctga acctgagcca catcctgatc
    28561 ccgctgccgg aaaacccgac ttctgatcag gtgaacgaag cggaaagcca ggcgcgcgcc
    28621 attgtcgatc aggcgcgtaa cggcgctgat ttcggtaagc tggcgattgc tcattctgcc
    28681 gaccagcagg cgctgaacgg cggccagatg ggctggggcc gtattcagga gttgccgggt
    28741 atcttcgccc aggcattaag caccgcgaag aaaggcgaca ttgttggccc gattcgttcc
    28801 ggcgttggct tccatattct gaaagttaac gacctgcgcg gcgaaagcaa aaatatctcg
    28861 gtgaccgaag ttcatgctcg ccatattctg ctgaaaccgt cgccgatcat gactgacgaa
    28921 caggcccgtg tgaaactgga acagattgct gccgatatca agagtggtaa aacgactttt
    28981 gctgccgcag cgaaagagtt ctctcaggat ccaggctctg ctaaccaggg cggtgatctc
    29041 ggctgggcta caccagatat tttcgatccg gccttccgtg acgccctgac ccgcctgaac
    29101 aaaggtcaaa tgagtgcacc ggttcactct tcattcggct ggcatttaat cgaactgctg
    29161 gatacccgta atgtcgataa aaccgacgct gcgcagaagg atcgtgcata ccgcatgctg
    29221 atgaaccgta agttctcgga agaagcagca agctggatgc aggaacaacg cgccagcgcc
    29281 tacgttaaaa tcctgagcaa ctaatggtta aaacccaacg tgttgtgatc actcccggcg
    29341 agcccgccgg gattggcccg gacttagttg tccagcttgc acagcgtgag tggccggtcg
    29401 aactggttgt ttgtgccgat gccactctcc ttaccgaccg ggcagcgatg ctcggtttgc
    29461 cgctcaccct ccgcccttat tcccccaact cccctgcaca accgcaaact gcgggcacat
    29521 taacgctact tcctgtcgcg ctacgcgaat ctgtcactgc ggggcagtta gcgattgaaa
    29581 atgggcatta cgtggtggag acgctggcgc gagcgtgtga tggctgtctg aacggtgaat
    29641 ttgctgcgct gatcacaggc cccgtgcata aaggcgtcat taacgacgca ggtattccgt
    29701 ttactggtca taccgagttt ttcgaagagc gctcgcaggc gaaaaaagtg gtgatgatgc
    29761 tggcgaccga agaacttcgc gtggcgctgg caacgacgca tttaccgctg cgcgatatcg
    29821 cagatgctat cacccctgca cttttgcacg aagtgattgc tattttgcat cacgatttgc
    29881 gtacaaaatt tggtattgcc gaaccgcgca ttctggtctg cgggctgaat ccgcacgcgg
    29941 gcgaaggcgg tcatatgggt acggaagaga tagacaccat tattccggtg ctcgacgagc
    30001 tgcgggcgca ggggatgata ctcaacgggc cgctgcctgc cgataccctg tttcagccga
    30061 aatatctcga taacgccgac gccgtgctgg cgatgtacca cgatcagggt cttcccgtgc
    30121 taaaatacca gggcttcggg cgcggtgtga acattacgct gggcctgccc tttattcgca
    30181 catcagtgga ccacggcacc gcgcttgaac tggcgggacg tggcgaagcc gatgtcggca
    30241 gttttattac ggcgcttaat ctcgccatca aaatgattgt taacacccaa tgaataatcg
    30301 agtccaccag ggccacttag cccgtaaacg cttcgggcaa aactttctca acgatcagtt
    30361 cgtgatcgac agcattgttt ctgccattaa cccgcaaaag ggccaggcaa tggtcgaaat
    30421 cggccccggt ctggcggcat tgaccgagcc ggtcggcgaa cgtctggacc agctgacggt
    30481 catcgaactt gaccgcgatc tggcggcacg tctgcaaacg catccattct taggcccgaa
    30541 actgacgatt tatcagcagg atgcgatgac ctttaacttt ggcgaactgg ccgagaaaat
    30601 gggtcagccg ctgcgtgttt tcggcaacct gccttataac atctccacgc cgttgatgtt
    30661 ccatctgttt agctatactg atgccattgc cgacatgcac tttatgttgc aaaaagaggt
    30721 ggtgaatcgt ctggttgcag gaccgaacag caaagcgtat ggtcgattaa gcgtcatggc
    30781 gcaatactat tgcaacgtga tcccggtact ggaagttccg ccgtcagcct ttacaccacc
    30841 acccaaagtg gattccgccg tcgtgcgcct ggttcctcat gcaacgatgc ctcacccggt
    30901 taaagatgtt cgtgtgttga gccgcatcac caccgaagcc tttaaccagc gtcgtaaaac
    30961 cattcgtaac agcctcggca acctgtttag cgtcgaggtg ttaacgggaa tggggatcga
    31021 cccggcgatg cgagcggaaa atatctctgt cgcgcaatat tgccagatgg cgaactatct
    31081 ggcggagaac gcgcctttgc aggagagtta acgatgatca attcgccccg agtgtgtatt
    31141 caggttcaaa gcgtctacat tgaggcacaa tcttcacctg ataatgaacg ttacgttttt
    31201 gcttataccg taaccatacg caatctgggg cgagcgccag tgcagttgtt ggggcgttac
    31261 tggctgatca ccaatggcaa tggccgtgaa accgaagtcc agggcgaagg agtggttggc
    31321 gtccagccac ttatcgcgcc tggcgaagag taccagtaca ccagcggtgc aatcattgaa
    31381 accccgctgg gcaccatgca gggtcactac gaaatgatcg atgaaaatgg cgtccctttc
    31441 agcatcgaca ttcccgtatt ccgactcgcc gttcccacac tcattcatta aaagaatatg
    31501 gcgacatacc ttattggcga cgttcatggt tgttacgatg aactgatcgc attgctgcat
    31561 aaagtagaat ttacccctgg gaaagatacc ctctggctga cgggcgatct ggtcgcgcgc
    31621 ggcccgggtt cgctggatgt tctgcgctat gtgaaatcct taggcgacag cgtacgtctg
    31681 gtgctgggca atcacgatct gcatctgctg gcggtatttg ccgggatcag ccgcaataaa
    31741 ccgaaagatc gcctgacacc gctgctggaa gcgccggatg ccgacgagct gcttaactgg
    31801 ctgcgtcgcc agcctttgct gcaaatcgac gaagagaaaa agttggtgat ggcccacgca
    31861 gggatcacgc cgcagtggga tctacagacc gccaaagagt gcgcgcgcga tgtagaagcg
    31921 gtgctatcga gtgactccta tcccttcttt ctcgacgcta tgtacggcga tatgccaaat
    31981 aactggtcac cggaattgcg ggggctggga agactgcgtt ttatcaccaa cgcctttacc
    32041 cgtatgcgtt tttgcttccc gaacggtcaa ctggatatgt acagcaaaga atcgccggaa
    32101 gaggcccctg ccccactgaa accgtggttt gcgattcctg gccctgtcgc tgaagaatac
    32161 agcatcgcct ttggtcactg ggcatcgctg gagggcaaag gtacgccgga aggtatatac
    32221 gcgctggata ccggctgctg ctggggtggt acattaacct gcctgcgctg ggaagataaa
    32281 cagtattttg tccagccgtc gaaccggcat aaggatttgg gcgaagcggc ggcgtcttaa
    32341 acacagcctg atataggaag gccggataag acgcgaccgg cgtcgcatcc ggcactagcc
    32401 gtaaattcta tacaaaatta ccgccgctcc agaatctcaa agcaatagct gtgagagttc
    32461 tgcgcatcag catcgtggaa ttcgctgaat accgattccc agtcatccgg ctcgtaatcc
    32521 gggaaatggg tgtcgccttc cacttctgcg tcgatatgcg tcagatacag tttctgcgct
    32581 tttggcagga actgctcata aacgcgaccg ccgccaatca ccatgatttc tggtacgtca
    32641 ccacacgccg cgatggcttc atccaccgac ttcacccacg ttacgcgatc gtccgtaccc
    32701 ggttgactgc tgaggataat atttttgcgt cctggcaacg gacgaccgat tgattcccag
    32761 gtatggcggc ccataatcac gggtttattt aaggtgttgc gtttaaacca ggcgagatcg
    32821 gcaggcaggt tccacggcat ggcgttttcc atgccgataa cgcgatctac cgctaacgcc
    32881 gcaatcagac tgatcattga gatttcccga taaaaaaaat tgtcgccact atacgtaaag
    32941 cgtaaaccgt cgtcgactgg tgcgaggatg atgttgagga aaattttata ttctgctggc
    33001 gagtccacgc tctctccctg gactcgccgc attacaatga aacaaaaaca aacagttagc
    33061 tgtaaagtgt gatttatgtc actctttatt aggatgaggg tttcgtttcc ggttcatccg
    33121 ccatgttgcc ggtatgttta ccttcttcgg ttccctgcca gccatgtcgt tgaattaatg
    33181 acagatgttc gcggtcctcg gtaatgatct cacttaacat cgcgctggtg cgtttataga
    33241 ccgccgcgcg ggctttggtg tcgttctcaa ccattgccat ctcttccacc atctgaatat
    33301 taaagcggcg gaacacatcg gcacgttctc gcgcttcata cggccccaga cctaaacttt
    33361 ccagtgccag acgcccggtt ttcagcgcac cttcgaaggt ttcacgctcc ggcttttcaa
    33421 cgcctgcctg acgcaaacga atgtagtggt cgacatcgcg ggcgcgggca ataatctgca
    33481 aatgcgggaa gtgttctttc accatctctg tcagttgcag gttggtttgc ggatcgtcga
    33541 tggcgttaat cagcacttcc gctttcgccg ctcccgcaga ttccagtaaa tccatccgcg
    33601 tggcatcgcc ataaaacact ttcataccaa atttacgcaa ggtttcgata tggtccggat
    33661 cgtgatcgag caccaccatt ttcaccccgc tggagagcag taaacgtccg gtgatctgcc
    33721 caaaacgacc gaatccggca atgattaccc gcggctgttc ttcgtcgatc tcatcggctt
    33781 cacgcgcctc ttcagtagaa gattgctcaa ggcgattgag gatcaccagc agaatcggcg
    33841 ttgccgccat cgacagcgcc accgccaggg tcagcgattt cgcccactcc ggctccagca
    33901 cattcgccat ctgcgccgcg ccaaatacca caaaggcaaa ctcactgccc tgccctaaca
    33961 acaccgcaaa ccaacgacgc tgtttatttg gcacttgcaa cggtcgggca atcagccaca
    34021 gcatggcgat tttgatgatg aggaaaccga gcagcaaaat gacaatgcgc aatgggtttt
    34081 caagcagcgt gccaaagtct atcgacatgc caacaccgat gaaaaacagc cccaacagca
    34141 aacctttaaa gggttcgata tcgctctcca gcgcatgacg gtattccgag cttgccagca
    34201 gtacgcccgc cagaaacgcg cccatcgcca tcgacaagcc gacctcttcc agcagcaaac
    34261 caaagccaaa cacgaggaat aacgccacgg cactaaacac ttcccgcaag ccagagcggg
    34321 ctacaaaacg cagcgccgga cgcgtgacat agcgccccag caataccacc agcaccagcg
    34381 cacccgccac ttttaacgcc gagagagcaa atgcgcccat cgtcgtcgag gcactgctcg
    34441 ttgccagtag cggaatcatc gccaccagcg ggatcgccgc gatatcctgg aacagcagca
    34501 ccgcaaaggc actgcgaccc atttgcgtca ccatcagatt gcgttcattc atcgcctgca
    34561 tggcaatcgc cgtagaggag agcgccagcg tcatgccgat caattccgcg acctgccagc
    34621 gcagcccaag taacatgcag aacagcccca gcaggccgcc gcaaatcacc atctgcaatg
    34681 cgccaccgcc gaacactgcc gcacgcagct tccacagcct ttgtggatcg agttcgaggc
    34741 cgataataaa cagcatcagc accaccccaa tctcggcaaa gtgcagaata gattcggcat
    34801 cggtcaccag tcgcagcccc cacgggccaa taatgcagcc ggcgatcagg tagccaagta
    34861 ccgatcccag accaagacgt accgcaatgg gtacaatcag cgctgccgaa ccgagataaa
    34921 tcagcgcctg aatcagcgta tggctatcca tgatgggcct cctgccattc cagcagacgt
    34981 tgcttatagt gacgcgcctg cccttcgagg gtttcgtcgt cacaaataaa ggtgcagtgc
    35041 atggcaaacg gtggcagcca gttcagcccg cagtagattg ccgtcgcctg tagcggctgc
    35101 gacagcacat caaagcccgg atgcgcacca atttcaaaat ggctttcccc gccgccggtc
    35161 gtcaccgccc acagcaaatg tttgccatgc agcgccttgc cgccgtgacc gtaagcccag
    35221 ccgtgcgaca aaactttatc gatccaaagt ttaagaagcg gaggaatgct gtaccactgc
    35281 atcggatgct gccagacgat cagatcggcg cgagacagcg cctcctgctc ggcggcaata
    35341 tcgatattga agtcaggata gagttgataa agagagcgaa tttcgacgcc ttccagcgtc
    35401 cttgcctgtt caagcatccg tttattcgca tgggaatgat gcggatacgg atgcgcataa
    35461 attataagaa tcataggtag cccgcgtgat tacgcctttg ttttcccaca aagtgtagtc
    35521 atatattcac gcggcttata gtcaataata ttgattcaga aaagagagaa atctgaacaa
    35581 tttaccccat tctctgcccg cggatcgtca tattgctggt ttgcgccaat gacatccctc
    35641 gatgtctccg gggcaaacgc tacggaaatc aacaagccaa acagcgagat acccgccccc
    35701 attagcatcg tgttactgat accgtaatta ttgataaaga tcggcagtgc ccaggtcgaa
    35761 acaatggtgc caatacggct taaggacata atcacgccca cggcagaggc gcggatatct
    35821 gtcgggaaga gttcattagg atagagccac tgcaaattac ccggcccgcc agagaaaaag
    35881 gcatacaccg caaaggccat cactaccagc cagatcccca tatccgggat cagccccaaa
    35941 accgccagcg ccagcgtcat catggcaaag ctgccaatca acaatggacg ccgtccggca
    36001 gtgtttaacc acagcatcgg cggaatacag ccgagcataa agaacaggct aatcaccacg
    36061 ttccccagcg ccgcgttttt gccaacaccc aatcccaaca aaccaacgat ttgcgggcca
    36121 aaggtgtaaa tggcgaacat tgggatcacc tggcaggtcc agatggcggc aacaaacaga
    36181 acaaaaggaa aatggcggcg attaaacaga tcgcgaaaac gggtttgctg cggctgctct
    36241 tcatcgaaag ccaccggttc gccaaacagt tttatcatca tctcttcgca ctcttttact
    36301 cgccctttgc gtaataacca gcggggagat tcaggcagtt cgaatcgacc aatcaaaatc
    36361 aacaaacagg ggatcgccgc gctacccagc atccagcgcc agccgccttc cacatcataa
    36421 agccagtagc cgaccagatc ggcgcaggtc gcgccgacat accacatggc ggcgataaag
    36481 ctgatggaaa atgcccgctg acgggtactg gagaactcgg tgatcattga ggtggcgatg
    36541 ggataatcgg caccgatgac aatgccgata agtacccgca tcaccaacag ttcgacgggg
    36601 gatgaaacaa acatcgtcgc caccgatatc acgccgatgg cgatgatatc aatgaggaac
    36661 attttgcgcc gtccgacttt atcggaaata tagccaaaca gcgatgtgcc aacgaacagc
    36721 ccggcgagcg ttcccgcgcc caacaagcca atccagtcag cgtccagttt tagcgccgga
    36781 gtcagttgct ccagcgccac gccaatcatt accagtacat aaccatcca
//
LOCUS       DADMJE010000020        36617 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.020, whole genome shotgun sequence.
ACCESSION   DADMJE010000020 DADMJE010000000
VERSION     DADMJE010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36617)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36617)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36617
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.020"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            86..982
                     /locus_tag="JN001_000912"
     CDS             86..982
                     /locus_tag="JN001_000912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417396.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9052226.1"
                     /translation="MDIFISKKMRNFILLAQTNNIARAAEKIHMTASPFGKSIAALEE
                     QIGYTLFTRKDNNISLNKAGQELYQKLFPVYQRLSAIDNEIHNSGRRSREIVIGIDNT
                     YPTIIFDQLISLGDKYEGVTAQPVEFSENGVIDNLFDRQLDFIISPQHVSARVQELEN
                     LTISELPPLRLGFLVSRRYEERQEQELLQELPWLQMRFQNRANFEAMIDANMRPCGIN
                     PTIIYRPYSFMAKISAVERGHFLTVIPHFAWRLVNPATLKYFDAPHRPMYMQEYLYSI
                     RNHRYTATMLQHIAEDRDGTNH"
     gene            complement(979..2457)
                     /gene="scpC"
                     /locus_tag="JN001_000913"
     CDS             complement(979..2457)
                     /gene="scpC"
                     /locus_tag="JN001_000913"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionyl-CoA:succinate CoA transferase"
                     /protein_id="HAY9052227.1"
                     /translation="METQWTRMTADEAAEIIQHNDMVAFSGFTPAGSPKALPTAIARR
                     ANEQHEAKKPYQIRLLTGASISAAADDVLSDADAVSWRAPYQTSSGLRKKINQGAVSF
                     VDLHLSEVAQMVNYGFFGDIDVAVIEASALAPDGRVWLTSGIGNAPTWLLRAKKVIIE
                     LNHYHDPRVAELADIVIPGAPPRRNSVSIFHAMDRVGTRYVQIDPKKIVAVVETNLPD
                     AGNMLDKQNPMCQQIADNVVTFLLQEMAHGRIPPEFLPLQSGVGNINNAVMARLGENP
                     EIPPFMMYSEVLQESVVHLLETDKISGASASSLTISADSLRKIYDNMDYFASRIVLRP
                     QEISNNPEIIRRLGVIALNVGLEFDIYGHANSTHVAGVDLMNGIGGSGDFERNAYLSI
                     FMAPSIAKEGKISTVVPMCSHVDHSEHSVKVIITEQGIADLRGLSPLQRARTIIDNCA
                     HPMYRDYLHRYLENAPGGHIHHDLSHVFDLHRNLIATGSMLG"
     gene            complement(2481..3266)
                     /gene="scpB"
                     /locus_tag="JN001_000914"
     CDS             complement(2481..3266)
                     /gene="scpB"
                     /locus_tag="JN001_000914"
                     /EC_number="7.2.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311816.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA decarboxylase"
                     /protein_id="HAY9052228.1"
                     /translation="MSYQYVNVATINKVAVIEFNYGRKLNALSKVFIDDLMQALSDLN
                     RPEIRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISM
                     VEGSVWGGAFEMIMSSDLIIAASTSTFSMTPVNLGVPYNLVGIHNLTRDAGFHIVKEL
                     IFTASPITAQRALAVGILNHVVEVEELEDFTLQMAHHISEKAPLAIAVIKEELRVLGE
                     AHTMNSDEFERIQGMRRAVYDSEDYQEGMNAFLEKRKPNFVGH"
     gene            complement(3277..4272)
                     /gene="meaB"
                     /locus_tag="JN001_000915"
     CDS             complement(3277..4272)
                     /gene="meaB"
                     /locus_tag="JN001_000915"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HAY9052229.1"
                     /translation="MINEATLAESIRRLRQGERATLAQAMTLVESRHPRHQALSTQLL
                     DAIMPYCGNTLRLGVTGTPSAGKSTFLEAFGMLLIREGLKVAVIAVDPSSPVTGGSIL
                     GDKIRMNDLARAEAAFIRPVPSSGHLGGASQRARELMLLCEAAGYDVVIVETVGVGQS
                     ETEVARMVDCFISLQIAGGGDDLQGIKKGLMEVADLIVINKDDGDNHTNVAIARHMYE
                     SALHILRRKYDEWQPRVLTCSALEKRGIDEIWHAIIEFKTALTASGRLQQVRQQQSVE
                     WLRKQTEEEVLNHLFANEDFDRYYRQTLLAVKNNTLSPRTGLRQLSEFIQTQYFD"
     gene            complement(4265..6409)
                     /gene="scpA"
                     /locus_tag="JN001_000916"
                     /pseudo
     CDS             complement(4265..6409)
                     /gene="scpA"
                     /locus_tag="JN001_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417392.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase"
     gene            complement(6613..7506)
                     /locus_tag="JN001_000917"
     CDS             complement(6613..7506)
                     /locus_tag="JN001_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator ArgP"
                     /protein_id="HAY9052230.1"
                     /translation="MKRPDYRTLQALDAVIRERGFERAAQKLCITQSAVSQRIKQLEN
                     MFGQPLLVRTVPPRPTEQGQKLLALLRQVELLEEEWLGDEQTGSTPLLLSLAVNADSL
                     ATWLLPALAPVLADSPIRLNLQVEDETRTQERLRRGEVVGAVSIQHQALPSCLVDKLG
                     ALDYLFVSSKPFAEKYFPNGVTRSALLKAPVVAFDHLDDMHQAFLQQNFDLPPGSVPC
                     HIVNSSEAFVQLARQGTTCCMIPHLQIEKELASGELIDLTPGLFQRRMLYWHRFAPES
                     RMMRKVTDALLDYGHKVLRQD"
     gene            7889..8548
                     /gene="rpiA"
                     /locus_tag="JN001_000918"
     CDS             7889..8548
                     /gene="rpiA"
                     /locus_tag="JN001_000918"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HAY9052231.1"
                     /translation="MTQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTMKG
                     QIEGAVSSSDASTEKLKSLGIHVFDLNEVDSLGIYVDGADEINGHMQMIKGGGAALTR
                     EKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYRQGV
                     VTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTIV
                     K"
     gene            8803..10035
                     /locus_tag="JN001_000919"
     CDS             8803..10035
                     /locus_tag="JN001_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-3-phosphoglycerate dehydrogenase"
                     /protein_id="HAY9052232.1"
                     /translation="MAKVSLEKDKIKFLLVEGVHQKALESLRAAGYTNIEFHKGALDD
                     EQLKESIRDAHFIGLRSRTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPVF
                     NAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVWNKLAAGSFEARGKKLGIIGYG
                     HIGTQLGILAESLGMYVYFYDIENKLPLGNATQVQHLSDLLNMSDVVSLHVPENPSTK
                     NMMGAKEISLMKPGSLLINASRGTVVDIPALCDALASKHLAGAAIDVFPTEPATNSDP
                     FTSPLCEFDNVLLTPHIGGSTQEAQENIGLEVAGKLIKYSDNGSTLSAVNFPEVSLPL
                     HGGRRLMHIHENRPGVLTALNKIFAEQGVNIAAQYLQTSAQMGYVVIDIEADEDVAEK
                     ALQAMKAIPGTIRARLLY"
     gene            10264..10323
                     /gene="ibsC"
                     /locus_tag="JN001_000920"
     CDS             10264..10323
                     /gene="ibsC"
                     /locus_tag="JN001_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsC"
                     /protein_id="HAY9052233.1"
                     /translation="MMRLVIILIVLLLISFGAY"
     gene            10656..10715
                     /locus_tag="JN001_000921"
     CDS             10656..10715
                     /locus_tag="JN001_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY9052234.1"
                     /translation="MMRLAIILIVLLLISFPAY"
     gene            complement(10816..11418)
                     /locus_tag="JN001_000922"
     CDS             complement(10816..11418)
                     /locus_tag="JN001_000922"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HAY9052235.1"
                     /translation="MTQLPELPLTLSRQEIRKMIRQRRRALTPEQQQEMGQQAATRMM
                     TYPPVVMAHTVAVFLSFDGELDTQPLIEQLWRAGKRVYLPVLHPFSAGNLLFLNYHPQ
                     SELVMNRLKIHEPKLDVRDVLPLSRLDVLITPLVAFDEYGQRLGMGGGFYDRTLQNWQ
                     HYKTQPVGYAHDCQLVEKLPVEEWDIPLPAVVTPSKVWEW"
     gene            complement(11439..11622)
                     /gene="ssrS"
                     /locus_tag="JN001_000923"
     ncRNA           complement(11439..11622)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="JN001_000923"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(11664..11993)
                     /gene="zapA"
                     /locus_tag="JN001_000924"
     CDS             complement(11664..11993)
                     /gene="zapA"
                     /locus_tag="JN001_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HAY9052236.1"
                     /translation="MSAQPVDIQIFGRSLRVNCPPDQRDALNQAADDLNQRLQDLKER
                     TRVTNTEQLVFIAALNISYELAQEKAKTRDYAASMEQRIRMLQQTIEQALLEQGRITE
                     KTNQNFE"
     gene            12161..12739
                     /gene="ygfB"
                     /locus_tag="JN001_000925"
     CDS             12161..12739
                     /gene="ygfB"
                     /locus_tag="JN001_000925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708672.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YgfB"
                     /protein_id="HAY9052237.1"
                     /translation="MSIQNEMPGYNEMNQYLNQQGTGLTPAEMHGLISGMICGGNDDS
                     SWLPLLHDLTNEGMAFGHELAQALRKMHSATSDALQDDGFLFQLYLPDGDDVSVFDRA
                     DALAGWVNHFLLGLGVTQPKLDKVTGETGEAIDDLRNIAQLGYDEDEDQEELEMSLEE
                     IIEYVRVAALLCHDTFTHPQPTAPEVQKPTLH"
     gene            12765..14090
                     /gene="pepP"
                     /locus_tag="JN001_000926"
     CDS             12765..14090
                     /gene="pepP"
                     /locus_tag="JN001_000926"
                     /EC_number="3.4.11.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro aminopeptidase"
                     /protein_id="HAY9052238.1"
                     /translation="MSEISRQEFQRRRQALVEQMQPGSAALIFAAPEVTRSADSEYPY
                     RQNSDFWYFTGFNEPEAVLVLIKSDDTHNHSVLFNRVRDLTAEIWFGRRLGQDAAPEK
                     LGVDRALAFSEINQQLYQLLNGLDVVYHAQGEYAYADEIMNSALEKLRKGSRQNLTAP
                     ATMIDWRPVVHEMRLFKSPEEIAVLRRAGEITAMAHTRAMEKCRPGMFEYHLEGEIHH
                     EFNRHGARYPSYNTIVGSGENGCILHYTENESELRDGDLVLIDAGCEYKGYAGDITRT
                     FPVNGKFTQAQREIYDIVLESLETSLRLYRPGTSILEVTGEVVRIMVSGLVKLGILKG
                     DVDELIAQNAHRPFFMHGLSHWLGLDVHDVGVYGQDRSRILEPGMVLTVEPGLYIAPD
                     AEVPEQYRGIGIRIEDDIVITETGNENLTASVVKKPEEIEALMAAARKQ"
     gene            14087..15265
                     /gene="ubiH"
                     /locus_tag="JN001_000927"
                     /gene_synonym="visB"
     CDS             14087..15265
                     /gene="ubiH"
                     /locus_tag="JN001_000927"
                     /gene_synonym="visB"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-6-methoxyphenyl hydroxylase"
                     /protein_id="HAY9052239.1"
                     /translation="MSVIIVGGGMAGATLALAISRLSHGALPVHLIEATAPESHAHPG
                     FDGRAIALAAGTCQQLARIGVWQSLADCATAITTVHVSDRGHAGFVTLAAEDYQLAAL
                     GQVVELHNVGQRLFALLRKAPGVTLHCPDRVANVARTQSHVEVTLESGETLTGRVLVA
                     ADGTHSALATACGVDWQQEPYEQLAVIANVATSVAHEGRAFERFTQHGPLAMLPMSDG
                     RCSLVWCHPLERREEVLSWSDEKFCRELQSAFGWRLGKITHAGKRSAYPLALTRAARA
                     ITHRTVLVGNAAQTLHPIAGQGFNLGMRDVMSLAETLTQAHERGEDIGDYGILCRYQQ
                     RRQSDREATIGVTDSLVHLFANRWAPLVVGRNIGLMTMELFTPARDVLAQRTLGWVAR
                     "
     gene            15288..16490
                     /gene="ubiI"
                     /locus_tag="JN001_000928"
                     /gene_synonym="visC"
     CDS             15288..16490
                     /gene="ubiI"
                     /locus_tag="JN001_000928"
                     /gene_synonym="visC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent 2-octaprenylphenol hydroxylase"
                     /protein_id="HAY9052240.1"
                     /translation="MQCVDVAIVGGGMVGLAVACGLQGSGLRVAVLEQRVPEPLAADA
                     PPQLRVSAINAASEKLLTRLGVWQDILSRRASCYHGMEVWDKDSFGHISFDDQSMGYS
                     HLGHIVENSVIHYALWNKAQQSSDITLLAPAELQQVAWGENETFLTLKDGSMLTARLV
                     IGADGANSWLRNKADISLTFWDYQHHALVATIRTEEPHDAVARQVFHGEGILAFLPLS
                     DPHLCSIVWSLSPEEAQRMQQASEDEFNRALNIAFDNRLGLCKVESARQVFPLTGRYA
                     RQFAAHRLVLVGDAAHTIHPLAGQGVNLGFMDAAELIAELKRLHRQGKDIGQYIYLRR
                     YERSRKHSAALMLAGMQGFRDLFSGTNPAKKLLRDIGLKLADTLPGVKPQLIRQAMGL
                     NDLPEWLR"
     gene            complement(16564..16647)
                     /locus_tag="JN001_000929"
     CDS             complement(16564..16647)
                     /locus_tag="JN001_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052241.1"
                     /translation="MSKNTKSKNNDIRKYNAKTEVKLVYFK"
     gene            16937..18031
                     /gene="gcvT"
                     /locus_tag="JN001_000930"
     CDS             16937..18031
                     /gene="gcvT"
                     /locus_tag="JN001_000930"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HAY9052242.1"
                     /translation="MAQQTPLYEQHTLCGARMVDFHGWMMPLHYGSQIDEHHAVRTDA
                     GMFDVSHMTIVDLRGSRTREFLRYLLANDVAKLTKSGKALYSGMLNASGGVIDDLIVY
                     YFTEDFFRLVVNSATREKDLSWITQHAEPFGIEITVRDDLSMIAVQGPNAQAKAATLF
                     NDAQRQAVEGMKPFFGVQAGDLFIATTGYTGEAGYEIALPNEKAADFWRALVEAGVKP
                     CGLGARDTLRLEAGMNLYGQEMDETISPLAANMGWTIAWEPADRDFIGREALEVQREH
                     GTEKLVGLVMTEKGVLRNELPVRFTDAQGNQHEGIITSGTFSPTLGYSIALARVPEGI
                     GETAIVQIRNREMPVKVTKPVFVRNGKAVA"
     gene            18055..18444
                     /gene="gcvH"
                     /locus_tag="JN001_000931"
     CDS             18055..18444
                     /gene="gcvH"
                     /locus_tag="JN001_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HAY9052243.1"
                     /translation="MSNVPAELKYSKEHEWLRKEADGTYTVGITEHAQELLGDMVFVD
                     LPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWI
                     FKIKASDESELESLLDATAYEALLEDE"
     gene            18563..21436
                     /gene="gcvP"
                     /locus_tag="JN001_000932"
     CDS             18563..21436
                     /gene="gcvP"
                     /locus_tag="JN001_000932"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase"
                     /protein_id="HAY9052244.1"
                     /translation="MTQTLSQLENSGAFIERHIGPDAAQQQEMLNAVGAQSLNALTGQ
                     IVPKDIQLATPPQVGAPATEYAALAELKAIASRNKRFTSYIGMGYTAVQLPPVILRNM
                     LENPGWYTAYTPYQPEVSQGRLEALLNFQQVTLDLTGLDMASASLLDEATAAAEAMAM
                     AKRVSKLKNANRFFVASDVHPQTLDVVRTRAETFGFEVIVDDAQKVLDHQDVFGVLLQ
                     QVGTTGEIHDYTALISELKSRKIVVSVAADIMALVLLTAPGKQGADIVFGSAQRFGVP
                     MGYGGPHAAFFAAKDEYKRSMPGRIIGVSKDAAGNTALRMAMQTREQHIRREKANSNI
                     CTSQVLLANIASLYAVYHGPVGLKRIANRIHRLTDILAAGLQQKGLKLRHAHYFDTLC
                     VEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLEID
                     TLDKDVAHDSRSIQPAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIP
                     LGSCTMKLNAAAEMIPITWPEFAELHPFCPPEQAEGYQQMIAQLADWLVKLTGYDAVC
                     MQPNSGAQGEYAGLLAIRHYHESRNEGHRDICLIPASAHGTNPASAHMAGMQVVVVAC
                     DKNGNIDLTDLRAKAEQAGDNLSCIMVTYPSTHGVYEETIREVCEVVHQFGGQVYLDG
                     ANMNAQVGITSPGFIGADVSHLNLHKTFCIPHGGGGPGMGPIGVKAHLAPFVPGHSVV
                     QIEGMLTRQGAVSAAPFGSASILPISWMYIRMMGAEGLKKASQVAILNANYIASRLQD
                     AFPVLYTGRDGRVAHECILDIRPLKEETSISELDIAKRLIDYGFHAPTMSFPVAGTLM
                     VEPTESESKVELDRFIDAMLAIRAEIDQVKAGVWPLEDNPLVNAPHIQSELVAEWAHP
                     YSHEVAVFPAGVADKYWPTVKRLDDVYGDRNLFCSCVPISEYQ"
     gene            21702..22445
                     /locus_tag="JN001_000933"
                     /pseudo
     CDS             21702..22445
                     /locus_tag="JN001_000933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417378.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
     gene            complement(22502..23935)
                     /locus_tag="JN001_000934"
     CDS             complement(22502..23935)
                     /locus_tag="JN001_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY9052245.1"
                     /translation="MKKLTLPKDFLWGGAVAAHQVEGGWNKGGKGPSICDVLTGGAHG
                     VPREITKEVLPGKYYPNHEAVDFYGHYKEDIKLFAEMGFKCFRTSIAWTRIFPKGDEA
                     QPNEEGLKFYDSLFDELLKYNIEPVITLSHFEIPLHLVQQYGSWTNRKVVDFFVRFAE
                     VVFERYKHKVKYWMTFNEINNQRNWRAPLFGYCCSGVVYTEHDNPEETMYQVLHHQFV
                     ASALAVKAARRINPEMKVGCMLAMVPLYPYSCNPDDVMFAQESMRERYVFTDVQLRGY
                     YPSYVLNEWERRGFNIKMEDGDLDVLREGTCDYLGFSYYMINAVKAEGGTGDAISGFE
                     GSVPNPYVKASDWCWQIDPVGLRYALCELYERYQRPLFIVENGFGAYDKVEEDGSIND
                     DYRIDYLRAHIEEMKKAVTYDGVDLMGYTPWGCIDCVSFTTGQYSKRYGFIYVNKHDD
                     GTGDMSRSRKKSFNWYKEVIASNGEKL"
     gene            23980..24291
                     /locus_tag="JN001_000935"
     CDS             23980..24291
                     /locus_tag="JN001_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HAY9052246.1"
                     /translation="MQPNDITFSQRFQDDILAGRKTITIRDESESHFKTGDVLRVGRF
                     EDDGYFCTIEVTATSTVTLDTLTEKHAEQENMTLTELIKVIADIYPGQTQFYVIEFKC
                     L"
     gene            24455..25114
                     /locus_tag="JN001_000936"
     CDS             24455..25114
                     /locus_tag="JN001_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HAY9052247.1"
                     /translation="MVQKPLIKQGYSLAEEIANSVSHGIGLVFGIVGLVLLLVQAVDL
                     NASATAITSYSLYGGSMILLFLASTLYHAIPHQRAKMWLKKFDHCAIYLLIAGTYTPF
                     LLVGLDSPLARGLMIVIWSLALLGILFKLTIAHRFKILSLVTYLAMGWLSLVVIYEMA
                     VKLAAGSVTLLAVGGVVYSLGVIFYVCKRIPYNHAIWHGFVLGGSMCHFLAIYLYIGQ
                     A"
     gene            complement(25310..26290)
                     /gene="ygfZ"
                     /locus_tag="JN001_000937"
     CDS             complement(25310..26290)
                     /gene="ygfZ"
                     /locus_tag="JN001_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-modifying protein YgfZ"
                     /protein_id="HAY9052248.1"
                     /translation="MAFTPFPPRQPTASARLPLTLMTLDDWALATITGADSEKYMQGQ
                     VTADVSQMTENQHLLAAHCDAKGKMWSNLRLFRDGDGFAWIERRSVREPQLTELKKYA
                     VFSKVTIAADDERVLLGVAGFQARAALANLFSELPSREKQVVKEGATTLLWFEHPAER
                     FLIVTDEATANMLTDKLRGEAELNNSQQWLALNIEAGFPVIDAANSGQFIPQATNLQA
                     LGGISFKKGCYTGQEMVARAKFRGANKRALWLLAGSASRLPEAGEDLELKMGENWRRT
                     GTVLAAVKLEDGQVVVQVVMNNDMEPDSIFRVRDDANTLHIEPLPYSLEE"
     gene            26533..26799
                     /gene="sdhE"
                     /locus_tag="JN001_000938"
     CDS             26533..26799
                     /gene="sdhE"
                     /locus_tag="JN001_000938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000354044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD assembly factor SdhE"
                     /protein_id="HAY9052249.1"
                     /translation="MDINNKARIHWACRRGMRELDISIMPFFEHEYDSLSDDEKRIFI
                     RLLECDDPDLFNWLMNHGKPADAELEMMVRLIQTRNRERGPVAI"
     gene            26780..27187
                     /locus_tag="JN001_000939"
     CDS             26780..27187
                     /locus_tag="JN001_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin CptA"
                     /protein_id="HAY9052250.1"
                     /translation="MVLWQSDLRVSWRAQWLSLLIHGLVAAVILLMPWPLSYTPLWMV
                     LLSLVVFDCVRSQRRINARQGEIRLLMDGRLRWQGQEWSIVKAPWMIKSGMMLRLRSD
                     GGKRQHLWLAADSMDEAEWRDLRRILLQQETQR"
     gene            complement(27227..27748)
                     /gene="fldB"
                     /locus_tag="JN001_000940"
     CDS             complement(27227..27748)
                     /gene="fldB"
                     /locus_tag="JN001_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldB"
                     /protein_id="HAY9052251.1"
                     /translation="MNMGLFYGSSTCYTEMAAEKIRDIIGPELVTLHNLKDDSPKLME
                     QYDVLILGIPTWDFGEIQEDWEAVWDQLDDLNLEGKIVALYGLGDQLGYGEWFLDALG
                     MLHDKLSTKGVKFVGYWPTEGYEFTSPKPVIADGQLFVGLALDETNQYDLSDERIQSW
                     CEQILNEMAEHYA"
     gene            27860..28756
                     /gene="xerD"
                     /locus_tag="JN001_000941"
     CDS             27860..28756
                     /gene="xerD"
                     /locus_tag="JN001_000941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HAY9052252.1"
                     /translation="MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRG
                     LTLATAQSDDLQALLAERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLAS
                     PKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDI
                     SLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQM
                     TRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTT
                     QIYTHVATERLRQLHQQHHPRA"
     gene            28781..29491
                     /gene="dsbC"
                     /locus_tag="JN001_000942"
     CDS             28781..29491
                     /gene="dsbC"
                     /locus_tag="JN001_000942"
                     /EC_number="5.3.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000715205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional protein-disulfide
                     isomerase/oxidoreductase DsbC"
                     /protein_id="HAY9052253.1"
                     /translation="MKKGFMLFTLLAAFSGFAQADDAAIQQTLAKMGIKSSDIQPAPV
                     AGMKTVLTNSGVLYITDDGKHIIQGPMYDVSGAAPVNVTNKMLLKQLNALEKEMIVYK
                     APQEKHVITVFTDITCGYCHKLHEQMADYNALGITVRYLAFPRQGLESQAEQQMKAIW
                     CAKDKNKAFDDVMAGKAATPASCDIDIADHYALGVQLGVSGTPAIVLSNGTLVPGYQP
                     PKEMKEFLDEHQKMTSGN"
     gene            29497..31230
                     /gene="recJ"
                     /locus_tag="JN001_000943"
     CDS             29497..31230
                     /gene="recJ"
                     /locus_tag="JN001_000943"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HAY9052254.1"
                     /translation="MKQQIQLRRREVDETADLPAELPPLLRRLYASRGVRSAQELERS
                     VKGMLPWQQLSGVEKAVEILYNAFREGTRIIVVGDFDADGATSTALSVLAMRSLGCSN
                     IDYLVPNRFEDGYGLSPEVVDQAHARGAQLIVTVDNGISSHAGVEHARSLGIPVIVTD
                     HHLPGETLPAAEAIINPNLRDCNFPSKSLAGVGVAFYLMLALRTFLRDQGWFDERGIA
                     IPNLAELLDLVALGTVADVVPLDANNRILTWQGMSRIRAGKCRPGIKALLEVANRDAQ
                     KLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNIGEARVLANELDALNQTRKEIEQ
                     GMQIEALTLCEKLERSRDTLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAG
                     DGTLKGSGRSIQGLHMRDALERLDTLYPGMMLKFGGHAMAAGLSLEEDKFELFQQRFG
                     ELVTEWLDPSLLQGEVVSDGPLSPAEMTMEVAQLLRDAGPWGQMFPEPLFDGHFRLLQ
                     QRLVGERHLKVMVEPVGGGPLLDGIAFNVDTALWPDNGVREVQLAYKLDINEFRGNRS
                     LQIIIDNIWPI"
     gene            31321..32419
                     /gene="prfB"
                     /locus_tag="JN001_000944"
     CDS             join(31321..31395,31397..32419)
                     /gene="prfB"
                     /locus_tag="JN001_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311790.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HAY9052255.1"
                     /translation="MFEINPVNNRIQDLTERSDVLRGYLDYDAKKERLEEVNVELEQP
                     DVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEADDEETFNEAVAE
                     LDALEEKLAQLEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRG
                     FKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFS
                     SAFVYPEVDDDIDIDINPADLRIDVYRASGAGGQHVNRTESAVRITHIPTGIVTQCQN
                     DRSQHKNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWGSQIRSYVLDDSRIK
                     DLRTGVETRNTQAVLDGSLDQFIEASLKAGL"
     gene            32429..33946
                     /gene="lysS"
                     /locus_tag="JN001_000945"
     CDS             32429..33946
                     /gene="lysS"
                     /locus_tag="JN001_000945"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HAY9052256.1"
                     /translation="MSEQHAQGADAVVDLNNELKTRREKLANLREQGIAFPNDFRRDH
                     TSDQLHAEFDGKENEELEALNIEVAVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARD
                     DLPEGVYNEQFKKWDLGDILGAKGKLFKTKTGELSIHCTELRLLTKALRPLPDKFHGL
                     QDQEARYRQRYLDLISNDESRNTFKVRSQILSGIRQFMVNRGFMEVETPMMQVIPGGA
                     AARPFITHHNALDLDMYLRIAPELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFT
                     MMELYMAYADYKDLIELTESLFRTLAQDILGKTEVTYGDVTLDFGKPFEKLTMREAIK
                     KYRPETDMADLDNFDSAKAIAESIGIHVEKSWGLGRIVTEIFEEVAEAHLIQPTFITK
                     YPAEVSPLARRNDINPEITDRFEFFIGGREIGNGFSELNDAEDQAQRFLDQVAAKDAG
                     DDEAMFYDEDYVTALEHGLPPTAGLGIGIDRMVMLFTNSHTIRDVILFPAMRPVK"
     gene            complement(33989..34537)
                     /gene="idi"
                     /locus_tag="JN001_000946"
     CDS             complement(33989..34537)
                     /gene="idi"
                     /locus_tag="JN001_000946"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HAY9052257.1"
                     /translation="MQTEHVILLNAQGVPTGTLEKYAAHTADTLLHLAFSSWLFNAKG
                     QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNEDAVIRRCRYELGVEITPPESIYPDF
                     RYRATDPNGIVENEVCPVFAARTNSALQINDDEVMDYQWCDLADVLHGIDATPWAFSP
                     WMVMQAANSEARKLLSAFAQHN"
     gene            34592..34663
                     /locus_tag="JN001_000947"
     CDS             34592..34663
                     /locus_tag="JN001_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052258.1"
                     /translation="MINQVSVYRQPPVLSGCRQVKTI"
     gene            complement(34660..34785)
                     /locus_tag="JN001_000948"
     CDS             complement(34660..34785)
                     /locus_tag="JN001_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052259.1"
                     /translation="MNLLMRAIFSLLLLFTLSIPVISDCVAMAIESRFKYMMLLF"
     gene            complement(34787..36235)
                     /locus_tag="JN001_000949"
     CDS             complement(34787..36235)
                     /locus_tag="JN001_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417364.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HAY9052260.1"
                     /translation="MSAIDSQLLSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAG
                     AVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFA
                     AVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSVGL
                     SIIQVGIDWAAGGKGNPQYGNPVYSGISFAVLIFILLITRYAKGFMSNVAVLLGIVFG
                     FLLSWMMNEVNLSGLHDALWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFL
                     ALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVC
                     ISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYN
                     LYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHAD
                     LVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE"
BASE COUNT         8822 a         9217 c         9795 g         8783 t
ORIGIN      
        1 gatcatggac gactgggggc agtaatcatg ccgggtctgg ctggctaaca ccccattata
       61 aggagtacga ataaagtaac gggggatgga catttttatt tcgaaaaaga tgcgcaattt
      121 cattttatta gcgcaaacca ataatattgc ccgggcggca gaaaaaatcc atatgacggc
      181 ttcgccattt ggtaaaagca ttgccgcgct ggaagaacaa attggctata cgctatttac
      241 ccgcaaagat aataatatca gcctcaataa agccggtcag gaactgtatc aaaaactgtt
      301 cccggtttat caacgacttt ctgcgattga taatgaaatc cataactcag ggcgtcgttc
      361 acgagaaatt gtgattggca tagataatac ttatccgaca attattttcg atcagttgat
      421 tagtctcgga gataagtatg aaggcgtgac cgcccagcca gttgagttca gcgaaaacgg
      481 cgttatcgat aatctttttg accgtcagtt agattttatt atctccccac agcatgtatc
      541 tgcacgagtt caggaactgg aaaacctgac tatcagtgaa ttaccaccgc tgcgattggg
      601 ctttctcgtt tctcgccgtt atgaagagcg tcaagagcaa gagctgcttc aggagctgcc
      661 ctggctacaa atgcgctttc aaaaccgggc taacttcgaa gcaatgattg atgcgaatat
      721 gcgaccttgt gggatcaatc ccaccattat ttatcgtccc tacagtttta tggccaaaat
      781 cagcgccgtg gagcgcggac attttctgac ggtgatcccg cattttgcct ggcgactggt
      841 gaatccggca acgctgaaat attttgatgc gccgcacagg ccgatgtata tgcaggaata
      901 tctttattca atcagaaatc atcgttatac cgccacgatg cttcagcata ttgctgaaga
      961 tcgtgacggg acaaaccatt aacccagcat cgagccggtt gcaattaaat tacggtgtaa
     1021 gtcgaagacg tggctaagat cgtggtgaat atgtccgccg ggcgcatttt ccagatagcg
     1081 atgcagataa tcccgataca taggatgtgc acaattatca atgatagtgc gggcgcgttg
     1141 aagcggggaa agaccgcgca gatcggcgat cccttgttcg gtgatgatca ctttgacgct
     1201 gtgttcgctg tgatcaacat ggctgcacat tggcacgacg gttgagatct tgccttcttt
     1261 agcaatcgac ggagccataa agatcgacag atacgcgttg cgttcaaaat caccgctgcc
     1321 gccgatgccg ttcatcagat cgaccccggc tacgtgcgtt gaatttgcat gcccgtaaat
     1381 atcaaactcc aggccgacgt tcagagcgat gacgcccaga cgacggatga tttccgggtt
     1441 attggaaatc tcctgcggac gcaacacaat gcggctggca aagtaatcca tattgtcgta
     1501 aatcttgcgc agggaatcgg ccgagattgt caggctggag gcgctggccc cgctgatttt
     1561 gtcggtttcc agtaaatgca ccaccgattc ctgtagcact tccgaataca tcatgaacgg
     1621 aggaatttcc gggttttccc ccagacgcgc cattaccgca ttattgatat tgcccacgcc
     1681 actttgcagc ggcagaaatt ccggcggaat acgcccatgc gccatttcct gcaataagaa
     1741 cgtgaccacg ttatcggcaa tctgctggca catgggattt tgcttatcca gcatattacc
     1801 ggcgtcgggc aagttggttt ccacgacggc gacaatcttt ttcggatcga tttgcacata
     1861 gcgggtaccg acgcgatcca ttgcatggaa gatcgacacg ctattgcgcc gcggtggcgc
     1921 gccaggaatc acaatatctg ccagttctgc aacgcgcgga tcgtgatagt gattaagttc
     1981 aatgatcact ttcttcgctc gcagcagcca ggtcggcgca ttaccgatcc cgctggttaa
     2041 ccagactcga ccatccggtg ccagtgccga tgcttcaatg acggcaacat caatgtcgcc
     2101 gaagaaaccg taattgacca tttgcgccac ttcgctcaaa tgcaggtcaa cgaaactcac
     2161 cgcgccctga ttgatctttt tacgtaaacc ggacgatgtt tgatatggcg cacgccagga
     2221 aacagcatcg gcgtcagaaa gtacatcgtc agcggcggcg ctgattgacg cccccgtcag
     2281 caggcgaatt tgatacggct ttttggcctc atgctgttcg ttagctctgc gggcaatcgc
     2341 ggtgggtagg gctttcggcg aacccgccgg ggtaaagccg ctaaatgcca ccatgtcgtt
     2401 atgctggata atttctgccg cttcatcggc ggtcatcctt gtccactgag tttccatttt
     2461 tactccttcg ttcgcaggga ttaatgacca acgaaattag gtttacgttt ttcgaggaaa
     2521 gcgttcattc cttcctggta atcttcgctg tcataaaccg cgcgtcgcat cccctgaata
     2581 cgttcaaatt catcggagtt catggtgtgc gcttcgccca gtacacgcag ctcttctttg
     2641 ataacagcaa tggctaacgg cgctttctca gagatgtggt gcgccatttg taaggtgaaa
     2701 tcttccagtt cttccacttc cacaacatgg ttgaggatgc cgacagccag cgcgcgctgg
     2761 gcggtgattg gcgaagcggt aaaaatcagc tctttgacaa tgtggaagcc cgcgtcgcgg
     2821 gtcaggttgt gaatgccgac caggttatac gggacgccga ggtttacagg cgtcattgag
     2881 aaggttgagg tactggcggc gatgatcaga tcggaactca tgatcatttc aaatgcgcca
     2941 ccccaaacac taccttccac catcgaaatg atcggtttcg ggaatttttg gatcatgcgg
     3001 gtgatttgac gcaatggatc atcataggag agcggatcgc gaccgccaga cggcagttcg
     3061 tgaatatcgt gacctgcgga gaagactttg gatccactcg gcgcgcgcaa aatgatacag
     3121 cgaatttccg gccggttgag atcgcttaac gcctgcataa gatcatcaat aaagacttta
     3181 cttaaggcat taagttttcg gccatagtta aactcaatga ccgccacttt gttgatagtg
     3241 gcaacgttca catactgata agacataaaa attcctttaa tcaaaatatt gcgtctggat
     3301 aaattcactg agctgccgca ggccggtgcg cggtgagagc gtattgtttt tgaccgctaa
     3361 aagcgtctgg cggtaatagc gatcgaaatc ttcattcgcg aacaggtgat tcagtacttc
     3421 ttcttcggtc tgcttacgca gccattccac cgattgttgt tgccgcactt gttgtaaacg
     3481 accactggca gttagcgcgg ttttgaactc gatgatggcg tgccagatct catcgattcc
     3541 acgtttttcc agtgcgctac aagtcagaac ccgtggctgc cattcgtcgt atttacgtcg
     3601 cagaatatgc agggcactct cgtacatatg ccgggcaatg gcgacattgg tatggttatc
     3661 gccatcgtct ttgttgataa cgatcagatc agccacttcc atcagccctt ttttaatgcc
     3721 ctgcagatca tcgccgccac cggcaatttg caacgagata aaacagtcca ccatgcgggc
     3781 gacttctgtt tccgactgcc cgacgccaac cgtttcgaca atcactacgt cataacccgc
     3841 cgcttcgcat aacagcatta attcccgcgc tcgctgactg gcaccgccca gatgaccgga
     3901 ggatggtacc gggcgaataa acgccgcttc ggcacgcgcc aggtcattca tgcggatttt
     3961 atccccgaga atgctaccgc cagtgaccgg gctgctggga tcgaccgcaa taaccgcgac
     4021 ctttaatccc tctcgaatca acaacatgcc aaaggcctca agaaaggtac ttttccccgc
     4081 gctgggggtg ccggtaacgc ccagtcgcag ggtgttaccg cagtacggca taatggcatc
     4141 aagcagctgc gtacttagtg cctgatgacg cgggtgacgg ctttccacca gcgtcatggc
     4201 ctgggcgagt gtggcacgct caccctgacg taagcggcga atactttctg ccagcgtggc
     4261 ttcattaatc atgatgctgg cttatcagat tcagtacgtc gcgcacactg tcgagcatag
     4321 gtgtacctgg accataaatc gccgccacgc cgcgctcttg caggaaggcg taatcctgcg
     4381 gtggaatgac gccaccggcg actacgcaga tatcttcgcg tccccatttt ttcagcgcct
     4441 cgaccagttc cgggatcagc gttttatgac cggcagccag tgaggatgcg cccactacgt
     4501 gaacgtcatt ttctactgcc aggcgggcga tctcttcagg tgtagagaac atcgggctta
     4561 aatctacgtc gaaaccgaga tcggaatagg cgctggcgat cactttcgag ccgcgatcgt
     4621 gcccatcctg gcccattttg gcgatcagaa tgcgcaggcg acgaccattg tcggcaagga
     4681 actgctccgt ttgcgcaaca atggcatcga actcggaggc cgatttctca gattgatgat
     4741 agctttgcgc aatcacgccg gtaacacact ggcttggcac cagataacgg tcgaaagcgg
     4801 cttccagcgc atcggaaatt tcacccaggg tggcgcgaac gcgagcggca ttaacagcgg
     4861 cagccagcag gttttcgtta tgctgtgcgg cgtgagtcag ggcgttcaac gcggcggtta
     4921 cggcggcatc atcacgggtg gcgcgaatgc gttccagcga agcaatttgc tcgttacgca
     4981 ccatcacgtt gtcgatctca agtacatcgg tttcgtcttc gtgatccagt ttgtacttgt
     5041 tgacaccaac gatgacacgt ttgccctggt cgataagcga ctgttcgcgc gctgaggcct
     5101 attcgatcat tcgttttggc agacctgctt cgatcgcttt cgccatacca ccggcttcgt
     5161 cgatctgttg gataatagct ctggcttgtt tgacgatttg atcggtcagc gactcaatgt
     5221 aataggatcc ggccagtgga tcgacggtgc ggcagagttc tgattcttcc tggatgatga
     5281 tctgggtgtt gcgggcaatg cgtgctgaga aatcggtagg caaaccaagc gcttcgtcaa
     5341 aggcgttggt atgcagtgac tgagtaccgc ccagcgtcgc agccagtgct tcaatggtgg
     5401 tgcggataac gttgttatac ggatcctgtt cagtcaggct ccagcctgag gtctggcagt
     5461 gggtacgcag cgccagtgat ttcgggtcct gtgcgccaaa tccactgacc gcttcgctcc
     5521 atcaataacg tgccgcacgc aacatggcga cgttcataaa cagatccatg ccgatgccga
     5581 agaagaacga caggcgagga gcgaagtcat caattttcag tccggcagag attgctgctt
     5641 tgatgtactc aatcccatca gcgagcgtaa atgctacctg ctgcacgcag ttggcacccg
     5701 cttcacccat gtggtaaccg ctgatactga tggtattaaa tcgcggcatg ttgccggaac
     5761 accaggcgat gatgtcggcg ataatgcgca ttgacggttt tggcgggtaa atataggtgt
     5821 tgcggcagag gtactctttg aggatatcgt tctgaatggt gccggtcagt ttatcaggtg
     5881 taacaccttg ctcttccgcg gcgacgatat aaaacgccag tactggtagc actgcgccat
     5941 tcatggtcat cgaaaccgac attttatcca gcgggatctg gtcgaacagg actttcatat
     6001 cttccacggt gtcgatagcg acgcccgctt tgccgacgtc gcccgccacg cgcgggttat
     6061 cggagtcgta gcctcggtgg gtggcaaggt caaacgcaac ggaaagacct ttttgcccgg
     6121 cggccaggtt acggcgataa aaagcgttgg actcttttgc tgttgaaaaa ccagcatact
     6181 gacggatggt ccacggttgg gcggtataca tagtggcacg cgggccacga acgtagggcg
     6241 gcaaaccagg aagggtacct gtcacctcca gattatcgag atcggcttcg gtatacagcg
     6301 gcttgatggt gatcccttcc gcggtttgct gaaccagcga gtcgacagtt ttctcccgac
     6361 ggctcaattc cttgttggca agctgttgcc actcctgcac gttagacatt atttgctccg
     6421 taaaacgcaa tcaaaatgag ggtatttgcg cctacggtga gctttttacg tgggtttgtc
     6481 gccagcaaaa aaaatgcatt cagacgtcgt tttttgccgc ctgagatttg tctattttgt
     6541 gatgtgattc aaggaataca aaaagaagtg aggacaacgc ctgatatgtg ctatcaggca
     6601 ttatttgatg gattaatcct gacgaaggac tttgtgacca taatcgagca acgcatcagt
     6661 gactttacgc atcatgcggc tttcaggagc aaagcggtgc cagtagagca tccggcgttg
     6721 aaatagccct ggcgttaagt caatcagttc accgctggct agttctttct cgatttgcag
     6781 gtgcgggatc atacagcagg tggtgccctg gcgagcaagt tgcacgaacg cttctgaaga
     6841 attaacgata tggcagggca cgctgcctgg aggcagatcg aagttttgct gcaaaaaggc
     6901 ctggtgcata tcgtcaagat ggtcaaaggc gaccacaggt gctttcaata atgccgaacg
     6961 cgttacgccg ttagggaaat atttttcggc aaacggtttt gagctgacga acagatagtc
     7021 aagcgcaccg agcttatcga caaggcaact cggcagcgcc tgatgttgaa tactcaccgc
     7081 gccgaccact tcgccgcggc gcagacgttc ctgagtacgg gtttcatctt ctacctgcaa
     7141 gttgaggcgg ataggcgaat cagccaatac aggagccagt gccggaagca accacgtcgc
     7201 cagactgtcg gcgttgaccg ccagtgaaag cagcagcgga gtcgaaccgg tttgttcatc
     7261 gcccagccac tcttcttcca gcaactccac ctggcgcagc agtgccagca gtttttgccc
     7321 ttgttccgtc gggcgcggcg gtacggtacg caccaacagc ggctgcccga acatattttc
     7381 cagttgctta atgcgctgtg agacggctga ttgtgtaatg cacagctttt gtgccgcgcg
     7441 ctcaaatcct cgttcacgta tcaccgcatc cagtgcctgt aatgttctgt agtccgggcg
     7501 tttcattgct gttgtctgct cctggtaaat gctttttcct gcactatgac acaattttgt
     7561 gtcaggttgc atataccgca gccgtcggcg ggtaacattt gtatcaatgg ttaaacgcgc
     7621 agcttaaaag atcagggatt tgcgctattg catttcgctt agcgacttcg cgccctggtt
     7681 atgttgaatg gcgtggcgtt attgcctctg ttcgcaccgt ggagcggcat acccagaccg
     7741 ttgtatgctt tatttgcggg gcgaaagggg atgcccgcca ttgcgcgata ttttatggat
     7801 gagttaacca cccggcttgc caacggggtc tgaatcgctt tttttgtata taatgcgtgt
     7861 gaaatttcat accacaggcg aaacgatcat gacgcaggat gaattgaaaa aagcagtagg
     7921 atgggcggca cttcagtatg ttcagcccgg caccattgtt ggtgtaggta caggttccac
     7981 cgccgcacac tttattgacg cgctcggcac gatgaaaggc cagattgaag gggccgtttc
     8041 cagttcagat gcttccactg aaaaactgaa aagcctcggc attcacgttt ttgatctcaa
     8101 cgaagtcgac agccttggca tctacgttga tggcgcagat gaaatcaacg gccacatgca
     8161 aatgatcaaa ggcggcggcg cggcgctgac ccgtgaaaaa atcattgctt cggttgcgga
     8221 aaaatttatc tgtattgccg acgcctccaa gcaggttgat attctgggta aattcccgct
     8281 gccagtagaa gttatcccga tggcacgtag tgcagtggcg cgccagctgg tgaaactggg
     8341 cggtcgtccg gaataccgtc agggcgtggt gaccgataat ggcaacgtga tcctcgacgt
     8401 ccacggcatg gaaatccttg acccgatagc gatggaaaac gccataaatg cgattcctgg
     8461 cgtggtgact gttggcttgt ttgctaaccg tggcgcggac gttgcgctga ttggcacacc
     8521 tgacggtgtc aaaaccattg tgaaatgatc tgacggggga acctcccccg ttaaaaaaat
     8581 tctcttcatt aaatttggtg acatgtgtca cgtttttacc tggctattgt cgattgctct
     8641 aaataaatcc tctaaaccag catattcaac caagaaatac ctttgcgtga tatttcctca
     8701 acatcgcgac gcaaacgttc atattgccgc aatattattt tttgatatgt tgaaaggcgg
     8761 atgcaaatcc gcacacaaca tttcaaagac aggattgggt aaatggcaaa ggtatcgctg
     8821 gagaaagaca agattaagtt tctgctggta gaaggcgtgc accaaaaggc gctggaaagc
     8881 cttcgtgcag ctggttacac caacatcgaa tttcacaaag gcgcgctgga tgatgaacaa
     8941 ttaaaagaat ccatccgcga tgcccacttc atcggcctgc gatcccgtac ccatctgact
     9001 gaagacgtga tcaacgccgc agaaaagctg gtcgctattg gctgtttctg tataggaaca
     9061 aaccaggttg atctggatgc ggcggcaaag cgcgggatcc cggtatttaa cgcaccgttc
     9121 tcaaatacgc gctctgttgc ggagctggtg attggcgaac tgctgctgct attgcgcggc
     9181 gtgccggaag ccaatgctaa agcgcaccgt ggcgtgtgga acaaactggc ggcgggttct
     9241 tttgaagcgc gcggcaaaaa gctgggtatc atcggctacg gtcatattgg tacgcaattg
     9301 ggcattctgg ctgaatcgct gggaatgtat gtttactttt atgatattga aaataaactg
     9361 ccgctgggca acgccactca ggtacagcat ctttctgacc tgctgaatat gagcgatgtg
     9421 gtgagtctgc atgtaccaga gaatccgtcc accaaaaata tgatgggcgc gaaagaaatt
     9481 tcactaatga agcccggctc gctgctgatt aatgcttcgc gcggtactgt ggtggatatt
     9541 ccggcgctgt gtgatgcgct ggcgagcaaa catctggcgg gggcggcaat cgacgtattc
     9601 ccgacggaac cggcgaccaa tagcgatcca tttacctctc cactgtgtga attcgacaac
     9661 gtacttctga cgccacacat tggcggttcg actcaggaag cgcaggagaa tatcggcctg
     9721 gaagttgcgg gtaaattgat caagtattct gacaatggct caacgctctc tgcggtgaac
     9781 ttcccggaag tctcgctgcc actgcatggt ggtcgtcgtc tgatgcacat ccacgaaaac
     9841 cgtccgggcg tgctaactgc gctgaacaaa atcttcgccg agcagggcgt caacatcgcc
     9901 gcgcaatatc tacaaacttc cgcccagatg ggttatgtag ttattgatat tgaagctgac
     9961 gaagacgttg ccgaaaaagc gctgcaggca atgaaagcta ttccgggtac cattcgcgcc
    10021 cgtctgctgt actaattccc cttctctgaa aattaacggg caggtcactg acttgcccgt
    10081 ttttttatcc cttctccaca ccgttgccgc gttgcgcatt ctactttgcg agtctgctcc
    10141 agaaaataaa tcaaagtcag atcaatgcgt tgtgtttatt taatggggat ttacgatggc
    10201 gggacagtat ggggctgtaa cggtaaagcc ctcaccgaag cgagggctta aaggagaagg
    10261 gttatgatgc gacttgtcat catactgatt gtactgttac tgataagttt cggagcttat
    10321 taacagtcag tctctgggga ggagtcatcc tcccttaccc ttactcacta aattaggtca
    10381 aagaatcaac gatgtcaatc agggcgatgc ggggtgcatc gccctgaacc gaactttttg
    10441 atagccactt catcgcccac gtttactgcc gtaatagatc ctttttccca aaaattatct
    10501 ctgttttgca tggggttttt cgaacacgct cgaagaaaag atttaaaggt agatcaatgc
    10561 gttgtggtta tttaaagaga gcttacgata gctgggcagc atggggctgt aacggtaaag
    10621 ccctcaccga agcgagggct tgaaggagaa gggttatgat gcgacttgcc atcatactga
    10681 ttgtactgtt actcataagt ttcccagctt attaacagtc agtcacaggg gaggagcaat
    10741 cctcccttac ccttactcac taaattaggt taaagaatca acgatgtcaa tcagggcgat
    10801 gcaggtgtat cgcccttacc actcccagac tttcgacggt gtaaccaccg caggaagagg
    10861 gatatcccac tcttcaacgg ggagtttttc caccaactga caatcatgcg cataacccac
    10921 cggttgcgtt ttatagtgct gccagttttg taaggtccga tcataaaaac caccgcccat
    10981 tcccaggcgc tgaccgtact catcaaaggc gaccagcggt gtgatcagca cgtctaatcg
    11041 ggaaaggggt agcacgtcac gcacatccag ttttggctca tggattttca acctgttcat
    11101 caccagttcg ctttgcggat ggtaattcag gaacagcaaa ttaccagcac taaagggatg
    11161 caaaactgga agatatacgc gcttaccggc gcgccagagt tgttctatta gcggctgggt
    11221 gtcgagttca ccatcaaaag agaggaatac agcgaccgta tgcgccatca ccaccggggg
    11281 ataagtcatc atccgggtag cggcttgttg acccatttcc tgctgttgtt ccggcgttaa
    11341 cgcacgacga cgttgccgaa tcattttgcg gatttcttgt cgggataatg tcagtgggag
    11401 ttctggtagt tgcgtcatgg ctggtgccag ataagaaggg aatctccgag atgccgccgc
    11461 aggctgtaac ccttgaaccc ttggttcaag gtgaatgtgt cgtcgcagtt ttaaggcttc
    11521 tcggacggac cgagcatgct caccaaccgc ggagcgccac attcttgtgg tatgaaatat
    11581 cggctcaggg gactggcccg cttgcgaaca tctcagagaa attttgtctt cacggttact
    11641 ctaccacagt aaaccgaaaa gtgtcattca aagttttggt tagttttttc ggtgatgcga
    11701 ccttgttcaa gtaacgcttg ttctatggtc tgctgcagca tccgaatacg ctgttccata
    11761 cttgccgcgt agtcacgagt cttcgctttt tcttgcgcta actcatagct gatattcaat
    11821 gcggcaatga agaccaactg ttcagtattt gtgactctag tgcgttcttt cagatcttgc
    11881 aaccgttggt tcagatcgtc cgctgcctga ttcaacgcat ccctttggtc aggcgggcag
    11941 ttcacacgca gtgaacggcc aaaaatttgg atatcgacgg gttgtgcaga catgccacct
    12001 tcctgctgat tgactgcgct gccttcgtct ttagacccat ggtctgcgaa ggggcgacac
    12061 tatagctacc ctgatgagaa gagacaagcc cttttctggt ccaccagggc ccaaagtggt
    12121 agcatatcat gaatattcct ccctttgacg acgaatgctt atgtctatac agaacgaaat
    12181 gcctggttac aacgaaatga accagtatct gaaccaacaa gggacgggtc tgacccctgc
    12241 cgagatgcat ggtttaatca gtgggatgat atgtggcggt aacgatgaca gctcatggct
    12301 gccgctactt cacgacctga cgaacgaagg catggctttc ggtcatgagc tggcacaggc
    12361 actgcgtaaa atgcactctg ccaccagcga tgccctgcag gatgacggct tcctttttca
    12421 gctttatctg cctgatggcg atgatgtcag cgttttcgat cgggctgatg cattggcagg
    12481 ttgggtcaat cacttcctgc ttggtcttgg cgttacgcaa ccgaagctgg ataaagtgac
    12541 cggcgaaacc ggtgaagcta tcgacgatct gcgtaacatt gcgcaactgg gttacgacga
    12601 agacgaagat caggaagagc ttgaaatgtc gcttgaagag atcatcgaat acgttcgtgt
    12661 tgccgcgctg ttatgccacg acacctttac tcatccgcaa ccgaccgcgc cagaagtaca
    12721 aaaaccgact ctacactaaa aacaaaaaac gtaaggagag tgttatgagt gagatatccc
    12781 ggcaagagtt tcagcgtcgc cgtcaggccc tggtggagca aatgcaaccc ggcagcgccg
    12841 cgctgatttt tgctgcacca gaagtaacac gtagcgccga cagcgaatac ccctatcgtc
    12901 agaacagtga cttctggtac ttcaccggct ttaacgaacc ggaagcggtg ctggtgctga
    12961 ttaaaagcga tgacactcat aaccacagcg ttctgtttaa ccgcgttcgc gacctgacgg
    13021 cggagatctg gtttggccgt cgcttaggcc aggatgccgc gccagagaaa ctgggcgttg
    13081 accgcgcact ggcattcagc gaaatcaatc agcaacttta tcaactactt aacggcctgg
    13141 atgtggttta ccatgcccag ggcgaatatg catatgctga tgaaatcatg aacagtgcgc
    13201 tggaaaaact gcgtaaaggt tcgcggcaaa atctcaccgc accggcaacg atgatcgact
    13261 ggcgtcctgt tgttcatgaa atgcgcctgt tcaaatcgcc agaagagatt gccgtactcc
    13321 gccgcgcggg agaaatcacc gccatggcac atacacgggc gatggaaaaa tgccgtccgg
    13381 gaatgttcga gtaccatctg gaaggcgaaa ttcaccacga atttaaccgc cacggtgcgc
    13441 gctatccgtc ctataacacc attgtcggca gcggtgaaaa cggctgcatt ctgcactaca
    13501 ccgaaaacga gagtgaactg cgcgacggtg acctggtgtt gattgacgcg ggttgtgaat
    13561 acaaaggtta cgcgggcgat attacccgca ccttcccggt caacggcaaa ttcacccagg
    13621 cccagcgtga aatctacgac attgtgctgg agtctctcga aaccagcctg cgcctgtatc
    13681 gtccgggaac ttccattctg gaagtcactg gtgaagtggt gcgcatcatg gttagcggcc
    13741 tggtaaaact cggcattctg aaaggtgatg ttgatgaact gatcgctcag aatgcccatc
    13801 gtcctttctt tatgcatggc cttagccact ggttagggct agatgtccat gacgttggcg
    13861 tttatggtca ggatcgctcg cgcattctgg aaccgggcat ggtactgacc gtagagccag
    13921 ggctgtatat tgcgccggat gcagaagtgc cagaacaata tcgcggtatc ggcattcgta
    13981 ttgaagacga cattgtgatt accgaaaccg gtaacgaaaa cctcaccgcc agcgtggtga
    14041 aaaagccgga agaaatcgaa gcgttgatgg ctgctgcgag aaagcaatga gcgtaatcat
    14101 cgtcggtggc ggcatggcgg gcgcgacgct ggcgctggct atttcccggt taagtcacgg
    14161 ggcgctgccg gtacatttga ttgaagcgac tgcgccagag tcacatgctc atccgggctt
    14221 tgatggacga gcgatagcgc tggcggcggg tacctgtcag caactggcgc gcatcggcgt
    14281 ctggcaatct ctggcggatt gcgcaactgc catcaccacc gtgcatgtca gcgatcgtgg
    14341 tcacgctgga tttgtcaccc tcgccgcaga agattaccaa ctggcggcgc tgggacaggt
    14401 tgtcgaattg cacaatgtcg ggcaacggct gtttgcattg ctgcgtaaag cacctggcgt
    14461 aacgctgcat tgccctgatc gcgtggctaa cgttgcccgt actcagagtc acgttgaagt
    14521 gacgctggaa agtggcgaga cgctgacggg ccgcgtgctg gtagcagctg atggcaccca
    14581 ttcagcgtta gccaccgcgt gcggcgttga ctggcagcag gagccttacg aacaactggc
    14641 cgtgattgcc aacgttgcga cttccgttgc gcacgaaggc cgcgcttttg aacgcttcac
    14701 gcaacatggc ccgctggcga tgttgccgat gtctgacgga cgctgttcgc tggtctggtg
    14761 tcatccactg gaacggcgcg aagaggtgct gtcgtggagc gacgagaagt tttgccgtga
    14821 actccagtcg gcctttggct ggcgacttgg aaaaattacc cacgccggta aacgcagtgc
    14881 ttatccgctg gcgttaaccc gcgccgccag agctattacc catcgtaccg tgctggtggg
    14941 caatgcggcg caaactctgc acccgattgc cgggcaaggg tttaacctcg gtatgcgaga
    15001 tgtcatgagc cttgcggaaa ccctgactca ggcgcatgag cgcggagaag acatcggtga
    15061 ttacggcata ttgtgccgct atcagcagcg tcgacagagc gatcgcgaag caaccatcgg
    15121 cgtcacggac agcctggtac atctttttgc caaccgttgg gcaccgctgg ttgtcgggcg
    15181 caacatcgga ctgatgacga tggaattatt caccccggca cgcgatgtgc tggcgcagcg
    15241 caccctcggt tgggtggcgc gttgaaggcg gttttaagga ataaacaatg caatgtgttg
    15301 atgtagccat tgttggtggc ggcatggtgg ggctggcggt tgcctgcggc ttacagggga
    15361 gcggcttacg cgttgccgta ctggagcagc gcgtaccgga acctctggcg gcggatgcac
    15421 caccacaact gcgcgtttcg gctatcaatg ccgccagcga aaaattactc acccgtcttg
    15481 gcgtctggca ggacattctc tctcgtaggg ccagttgtta tcacggtatg gaagtgtggg
    15541 acaaagacag ttttggtcac atttcgtttg acgatcaaag catgggctat agccatcttg
    15601 ggcatatcgt tgaaaactca gtgattcact acgcgctgtg gaacaaagcg cagcagtcgt
    15661 cagatatcac tctgttggcc cccgcagaat tacagcaggt cgcctgggga gaaaatgaaa
    15721 ctttcctgac gctgaaagat ggcagcatgt taacggcgcg tctggtgatt ggcgcggacg
    15781 gtgctaattc ctggttgcgc aacaaagcag atatttcgct gactttctgg gattatcagc
    15841 atcacgcgct ggtagcgacc attcgcacgg aagaaccgca tgatgcggtg gcgcggcagg
    15901 ttttccatgg cgaaggcatt ctggcctttt taccgcttag cgatccgcat ctttgctcaa
    15961 ttgtctggtc actgtcgcca gaggaagcgc agcggatgca gcaggcaagt gaagatgaat
    16021 ttaatcgcgc gttaaatatc gcttttgata atcgcctggg cttatgcaag gttgagagcg
    16081 cgcgtcaggt gttcccactg acggggcgtt atgcgcgcca gtttgccgcg caccgtctgg
    16141 tgctagtggg cgacgccgcg cataccattc acccgctggc ggggcaggga gtaaatctcg
    16201 gctttatgga tgctgcagag ctgattgctg aactgaaacg gttgcatcgt caggggaaag
    16261 acatcgggca gtacatttac ctgcgccggt atgagcgtag ccgcaagcac agtgcggcgc
    16321 tgatgctggc tggtatgcag ggattccgcg atctgttttc cggtaccaat ccggcgaaaa
    16381 aactgctgcg tgatattggt ttgaaactgg ccgacacgct tcctggcgtt aaaccacaac
    16441 ttatccgcca ggcaatggga ttaaacgatt tgcctgaatg gctgcgttaa aaatttctct
    16501 tctgctgttt atttgatacc catcacactt tcatctcccg gttttttcgc cgggagattt
    16561 tcctcatttg aaataaacta atttcacctc cgttttcgca ttatattttc taatgtcatt
    16621 attttttgat ttagtgtttt ttgacatttt tttagctctt aatattgcct tattcaaatt
    16681 agctttctaa tggcatcatc tttatataga aactggtgtg ttttttggtt ttttattctg
    16741 tcgcgatttt ggcgtttttt aaccataagc taatgtgatg atcaatttta ccttatggtt
    16801 aacagtctgt ttcggtggta agttcaggca aaagagaacg attgcgttgg ggaccgggag
    16861 tggctccgat gctgggtttc gtggtgataa tttcaccatg aaaagttgtc agccccgctt
    16921 attcaatgag gacaagatgg cacaacagac tcctttgtac gaacaacaca cgctttgcgg
    16981 cgctcgcatg gtggatttcc acggctggat gatgccgctg cattacggtt cgcaaatcga
    17041 cgaacatcat gcggtacgta ccgatgccgg aatgtttgat gtgtcacata tgaccatcgt
    17101 cgatctccgc ggcagccgca cccgggagtt tctgcgttat ctgctggcga acgatgtggc
    17161 gaagctcacc aaaagcggca aagcccttta ctcggggatg ttgaatgcct ctggcggtgt
    17221 gatagatgac ctcatcgtct actactttac tgaagatttc ttccgcctcg ttgttaactc
    17281 cgccacccgc gaaaaagacc tctcctggat tacccaacac gctgaacctt tcggcatcga
    17341 aattaccgtt cgtgatgacc tttccatgat tgccgtgcaa gggccgaatg cgcaggcaaa
    17401 agctgccaca ctgtttaatg acgcccagcg tcaggcggtg gaagggatga aaccgttctt
    17461 tggcgtgcag gcgggcgatc tgtttattgc caccactggt tataccggtg aagcgggcta
    17521 tgaaattgcg ctgcccaatg aaaaagcggc cgatttctgg cgtgcgctgg tggaagcggg
    17581 tgttaagcca tgtggcttgg gcgcgcgtga cacgctgcgt ctggaagcgg gcatgaatct
    17641 ttatggtcag gagatggacg aaactatttc tcctttagcc gccaacatgg gctggactat
    17701 cgcctgggaa ccggcagatc gtgactttat cggtcgtgaa gccctggaag tgcagcgtga
    17761 gcatggtaca gaaaaactgg ttggtctggt gatgaccgaa aaaggcgtgc tgcgtaatga
    17821 actgccggta cgctttaccg atgcgcaggg caaccagcat gaaggcatta tcaccagcgg
    17881 tactttctcc ccgacgctgg gttacagcat tgcgctggcg cgcgtgccgg aaggtattgg
    17941 cgaaacggcg attgtgcaaa ttcgcaaccg tgaaatgccg gttaaagtga caaaacctgt
    18001 ttttgtgcgt aacggcaaag ccgtcgcgtg atttactttt ttggagattg attgatgagc
    18061 aacgtaccag cagaactgaa atacagcaaa gaacacgaat ggctgcgtaa agaagccgac
    18121 ggcacttaca ccgttggtat taccgaacat gctcaggagc tgttaggcga tatggtgttt
    18181 gttgacctgc cggaagtggg cgcaacggtt agcgcgggcg atgactgcgc ggttgccgaa
    18241 tcagtaaaag cggcgtcaga catttatgcg ccagtaagcg gtgaaatcgt ggcggtaaac
    18301 gacgcactga gcgattcccc ggaactggtg aacagcgaac cgtatgcagg tggctggatc
    18361 tttaaaatca aagccagcga tgaaagcgaa ctggaatcac tgctggatgc gaccgcatac
    18421 gaagcattgt tagaagacga gtaacggctt tattcctctt ctgcgggaga ggatcagggt
    18481 gaggaaaatt tatgcctcac cctcactctc ttcgtaagga gagaggttca caattcactg
    18541 cacgtttcag gaaccatcgc tcatgacaca gacgttaagc cagcttgaaa acagcggcgc
    18601 ttttattgaa cgccatatcg gaccggacgc cgcgcaacag caagaaatgc tgaatgccgt
    18661 tggcgcacaa tcgttaaacg cgctgaccgg ccagattgta ccgaaagata ttcagcttgc
    18721 gaccccgccg caggttggcg caccggcgac cgaatacgcc gcactggcag aactcaaggc
    18781 tattgccagt cgcaataaac gcttcacgtc ttacatcggc atgggttaca ccgccgtgca
    18841 gctaccgccg gttatcctgc gtaacatgct ggaaaatccg ggctggtata ccgcgtacac
    18901 tccgtatcaa cctgaagtct cccagggccg ccttgaagca ctgctcaact tccagcaggt
    18961 aacgctggat ttgactggac tggatatggc ctctgcttct cttctggacg aggccaccgc
    19021 tgccgccgaa gcaatggcga tggcgaaacg cgtcagcaaa ctgaaaaatg ccaaccgctt
    19081 cttcgtggct tccgatgtgc atccgcaaac gctggatgtg gtccgtactc gtgccgaaac
    19141 ctttggtttt gaagtgattg tcgatgacgc gcaaaaagtg ctcgaccatc aggacgtctt
    19201 cggcgtgctg ttacagcagg taggcactac cggtgaaatt cacgactaca ctgcgcttat
    19261 tagcgaactg aaatcacgca aaattgtggt cagcgttgcc gccgatatta tggcgctggt
    19321 gctgttaact gcgccgggta aacagggcgc ggatattgtt tttggttcgg cgcaacgctt
    19381 cggcgtgccg atgggctacg gtggcccaca cgcggcattc tttgcggcga aagatgaata
    19441 caaacgctca atgccgggcc gtattatcgg tgtatcgaaa gatgcagctg gcaataccgc
    19501 gctgcgcatg gcgatgcaga ctcgcgagca acatatccgc cgtgagaaag cgaactccaa
    19561 catttgtact tcccaggtac tgctggcaaa catcgccagc ctgtatgccg tttatcacgg
    19621 cccggttggc ctgaaacgta tcgctaaccg cattcaccgt ttgaccgata tcctggcggc
    19681 aggcctgcaa caaaaaggtc tgaagctgcg ccatgcgcac tatttcgaca ctctgtgtgt
    19741 ggaagtggcc gacaaggcgg gcgtactggc gcgtgccgaa gcggctgaaa tcaacctgcg
    19801 tagcgatatc ctgaacgcgg ttgggatcac ccttgatgaa accaccacgc gtgaaaacgt
    19861 aatgcagctt ttcagcgtgc tgctgggcga taaccacggg ctggagatcg acacgctgga
    19921 caaagacgtg gctcacgaca gccgctctat tcagcctgcg atgctgcgcg acgacgaaat
    19981 cctcactcat ccggtgttta atcgctacca cagcgaaacc gaaatgatgc gctatatgca
    20041 ctcgctggag cgtaaagatc tggcgctgaa tcaggcgatg atcccgctgg gttcctgcac
    20101 catgaaactg aacgccgccg ccgagatgat cccaatcacc tggccggaat ttgccgaact
    20161 gcacccgttt tgcccgccgg aacaggctga aggttatcag cagatgattg cgcagctggc
    20221 tgactggctg gtgaaactga ccggttacga cgccgtttgt atgcagccga actccggcgc
    20281 acagggcgaa tacgcgggcc tgctggcgat tcgtcattat catgaaagcc gcaacgaagg
    20341 gcatcgcgat atctgcctga tcccggcttc tgcgcacgga actaaccccg cttctgcaca
    20401 tatggcagga atgcaggtgg tggttgtggc gtgtgataaa aacggcaaca tcgatctgac
    20461 tgatctgcgc gcgaaagcgg aacaggcggg cgataacctc tcctgtatca tggtgactta
    20521 tccctctacc cacggcgtgt atgaagaaac gatccgtgaa gtgtgtgaag tcgtgcatca
    20581 gttcggcggt caggtttacc ttgatggcgc gaacatgaac gcccaggttg gcatcacctc
    20641 gccgggcttt attggcgcgg acgtttcgca cctcaacctg cataaaactt tctgcattcc
    20701 gcacggcggt ggtggtccgg gtatgggacc gatcggtgtg aaagcgcatc tggcaccgtt
    20761 tgtaccgggt catagcgtgg tgcaaatcga aggcatgtta acccgtcagg gcgcagtttc
    20821 tgcggcaccg ttcggtagcg cctctatcct gccaatcagc tggatgtaca tccgcatgat
    20881 gggcgcagaa gggctgaaaa aagcaagcca ggtggcaatc ctcaacgcca actatattgc
    20941 cagccgcctg caggatgcct tcccggtgct gtataccggt cgcgacggtc gcgtggcgca
    21001 cgaatgtatt ctcgatattc gcccgctgaa agaagaaacc agcatcagcg agctggatat
    21061 tgccaagcgc ctgatcgact acggtttcca cgcgccgacg atgtcgttcc cggtggcggg
    21121 tacgctgatg gttgaaccga ctgaatctga aagcaaagtg gaactggatc gctttatcga
    21181 cgcgatgctg gctatccgcg cagaaattga ccaggtgaaa gccggtgtct ggccgctgga
    21241 agataacccg ctggtgaacg cgccgcacat tcagagcgaa ctggtcgccg agtgggcgca
    21301 tccgtacagc catgaagttg cggtattccc ggcaggcgtg gcagacaaat actggccgac
    21361 ggtgaaacgt ctggatgatg tttacggcga ccgtaacctg ttctgctcct gcgtaccgat
    21421 tagcgaatac cagtaattca ctgattcgac tattttctaa aggcgcttcg gcgccttttt
    21481 agtcagatga caaagtacaa aagtgctcag acagtcccct cgcccctttg gggagagggt
    21541 tagggtgagg ggaacaggcc ggcactggcg cgaatattta ccctcacccc ggccctctcc
    21601 ctgaaagggc gaggggaaaa gcgtgccaac attgaagatt gagccagttt gttagcaatc
    21661 tcaaagatac gtcaacgaat taatttttct cggaaaaaca aatggctata gcacttgtga
    21721 ccggtggcag tcgcggcatc gggcgggcaa ctgcattact gttggcgaaa gaagagtata
    21781 cggtggcggt taattatcaa caaaacctcc atgcggcgca ggaagtggtg aacttaatca
    21841 cgcaagccgg tggcaaggca ttcgtgctcc aggcggatat cagcgacgaa aatcaggtca
    21901 tcgcaatgtt tacagcaatc gatcagcacg atgaaccgct agcagcgctg gtcaataacg
    21961 ccgggatctt gtttacccag tacaccgttg aaaaccttac cgcagagcga atcaaccgag
    22021 tactttccac caacgtgacg ggatattttc tctgctgccg cgaggcggta aaacgcatgg
    22081 cgcttaaaaa tggtggcagt ggcggcgcta tcgtcaatgt ctcttcggtg gcctcacggt
    22141 tgggttcgcc aggggaatag gttgattacg cggcatcgaa aggggcgatt gatacgttaa
    22201 ccaccggact atcgctggaa gtcgccgcgc aggggatccg cgttaactgc gtgcggccag
    22261 ggtttattta taccgaaatg cacgccagcg gcggcgagct tggacgcgtc gatcgcgtta
    22321 agtcgaacat ccccatgcag cgtggtggac aggcagaaga ggtcgcgcag gccattgtct
    22381 ggctactaag tgataaagcc tcttacgtca cgggaagttt tatcgatttg gcgggcggga
    22441 aataaaacag ggaagttgtc tgaccggatg caacaagtat tgcatccggt acttcatcga
    22501 cttaaagctt ctcgccgttg ctggcaatca cctctttgta ccagttaaag ctcttcttac
    22561 gtgaacgcga catatcgcca gtaccgtcgt catgtttatt cacatagata aagccgtagc
    22621 gtttgctgta ctgcccggta gtgaatgaca cgcagtcgat gcagccccac ggtgtgtagc
    22681 ccatcagatc cacaccatcg taagtcactg cttttttcat ctcttcaata tgggcgcgca
    22741 ggtagtcaat gcggtagtcg tcgttgatgc tgccatcttc ttccactttg tcgtaagcgc
    22801 caaaaccgtt ttcgacaata aacagcggcc tctgataacg ctcatacagt tcgcaaaggg
    22861 catagcgcag acctactgga tcaatctgcc agcaccagtc agacgcttta acatacgggt
    22921 tcggtacgct gccttcaaaa ccagagatcg catcgccggt gccgccttcg gccttcactg
    22981 cgttgatcat gtaatagctg aaaccaagat aatcgcaggt gccttcacgc agtacatcca
    23041 gatcgccatc ttccattttg atgttaaatc cgcgacgctc ccactcgttc aacacatagg
    23101 acgggtaata gccgcgtagc tgcacatcgg taaagacgta gcgttcgcgc atcgactcct
    23161 gagcgaacat cacatcgtcc gggttacagg agtaaggata gagcggcacc atcgccagca
    23221 tacagccgac tttcatctcc gggttaatgc gacgcgcggc tttcactgct agggcgctgg
    23281 cgacaaactg gtgatgcagc acctggtaca tcgtctcttc cgggttgtca tgctcggtat
    23341 acaccacgcc ggagcagcag taaccaaaca gcggcgcacg ccagttacgc tggttgttta
    23401 tttcgttgaa ggtcatccag tatttgactt tatgcttgta gcgttcgaat accacttccg
    23461 cgaaacggac aaagaaatca acgactttac ggttggtcca gctaccgtat tgctgcacca
    23521 gatgcagcgg tatttcaaag tgggagaggg ttatcaccgg ttcgatgttg tatttcagca
    23581 gttcatcgaa cagagagtcg taaaacttca gcccttcttc gtttggctga gcttcatcac
    23641 cttttggaaa aatacgcgtc caggcgatgg aagtccgaaa acatttgaag cccatttcgg
    23701 caaatagctt gatgtcttcc ttgtagtgac cataaaaatc aacggcttca tggtttggat
    23761 agtattttcc tggcaagact tctttggtga tttcgcgcgg cacgccgtgt gcgccaccgg
    23821 tcagaacgtc acaaatgctc ggtcctttgc cgcctttgtt ccagccgcct tcgacctgat
    23881 gagcggcaac ggcgccaccc cataagaaat ctttcggtaa ggtgagtttt ttcactatca
    23941 taggctccag atgagtcaat tcttacagga aatagtacca tgcagccaaa cgacatcact
    24001 ttttctcaac gtttccagga tgacattctg gctgggcgta aaaccatcac catccgcgac
    24061 gagtctgaat cgcacttcaa aacgggtgat gtgcttcgtg tcggacgttt tgaagatgac
    24121 ggttattttt gcacgattga agtcaccgca acctcaaccg taacgctgga tacgctgacg
    24181 gaaaaacatg cagagcagga aaatatgacc ctgactgaac tgataaaggt cattgccgac
    24241 atctatcccg gtcagacaca gttttatgtg attgaattta aatgtcttta aattgaactc
    24301 acgcctgtta gttgaaattt ctcatttaat ttcatgattt ttaggagatt agtctcaaat
    24361 cagaatttat tttagctaac aggtgttcac tggaactatt ctcagttacg ctggagaggt
    24421 atacatgtgc gtgtacgttt ctccggagta agttatggtt cagaagcccc tcattaagca
    24481 gggatattcg ctggcagagg aaattgccaa cagcgtcagt cacggcattg ggttggtgtt
    24541 tggtatcgtt gggctggtgt tgctactggt tcaggcggtg gatctcaatg ccagcgccac
    24601 agcgataacc agctacagcc tctatggcgg cagtatgatc ctgctgttcc tcgcttcgac
    24661 gctctatcac gccattcctc atcaacgggc aaaaatgtgg ctgaagaaat ttgaccattg
    24721 cgctatttac ctgttgattg ccggaaccta cacgccgttt ttgctggtgg ggctggattc
    24781 tccgttagcg cgcgggttga tgattgttat ctggagcctg gcattgctgg ggattctgtt
    24841 taaactgacc atcgcgcacc gattcaaaat tttatctctg gtgacctatc tggcgatggg
    24901 ctggctgtcg ctggtggtaa tttatgaaat ggcagttaag ctcgcggcgg gcagcgttac
    24961 cttactggcg gtaggcggcg tggtttattc gctcggagtg attttctatg tctgcaaacg
    25021 cattccctac aatcatgcca tctggcacgg cttcgtgctc ggcggcagta tgtgccactt
    25081 tctggcgatc tatttgtata ttgggcaggc gtaatgggta tgcctttgta ggcctgataa
    25141 gacgcgccag cgtcgcatca ggcatcggag cgcaaccgcc ggatgcggcg tgaacgcctt
    25201 atccgatcta cgggcctcgt ccctgttgtg ataaaggcat caaatcccag acatgataag
    25261 acgcgtcagc gtcgcatcag gcgataaatg cctgatgcga tacagagatt tactcttcga
    25321 gtgaatacgg cagcggctcg atatgcagtg tattcgcatc gtcgcgtacg cggaagatgc
    25381 tgtccggttc catatcgtta ttcatgacga cctgtaccac gacctgacca tcttccagtt
    25441 ttaccgcagc cagcaccgta ccggtacgac gccagttctc gcccattttc agctctaagt
    25501 cttcaccagc ttccggcagt cggctggcgc tacctgccag caaccagagc gcacgtttat
    25561 tggcaccacg gaattttgct cgcgccacca tctcttgtcc ggtataacag cctttcttaa
    25621 aactgatacc gcccagcgcc tggagattgg tcgcctgtgg gataaactgc ccgctgttcg
    25681 cggcatcaat caccgggaaa cccgcttcaa tgtttaatgc cagccactgt tggctattgt
    25741 tcagttccgc ttcaccgcgc agtttatcgg tcagcatatt ggcagtagct tcatcggtta
    25801 cgatcaggaa acgttctgcc gggtgttcaa accatagcaa agtggtcgcg ccttctttaa
    25861 ctacctgttt ttctctcgaa ggtagttcac taaagagatt ggcgagcgcg gcgcgcgcct
    25921 gaaaaccggc aacaccaagc agcacacgct cgtcgtctgc cgcgatggtc actttagaga
    25981 acaccgcata ttttttcagt tcagtcagct gcggttcacg cacgctgcgc cgttcaatcc
    26041 acgcaaagcc atcgccgtcg cggaacagac gtaaattgct ccacatttta cctttggcgt
    26101 cgcaatgggc ggcgagcagg tgctgatttt ctgtcatctg gctgacatct gctgtcacct
    26161 gaccctgcat atatttttcg ctgtccgcgc cagtaatggt ggcaagcgcc cagtcatcaa
    26221 gcgtcatcag cgtcagcggt aaacgggcag aagccgtagg ctgacgggga ggaaaaggtg
    26281 taaaagccat aatagagtcc tgagttgctt aacggcgtat taataactaa tggtaaaaga
    26341 gctatgaggc aatgcaagtg ctttcactac gcgatctgtg ccttctgcga ggcgacttcc
    26401 aaaaaaatga agctcttgaa ttgttgtgaa ttaatttcgc gatcgcgatg gtgtttactg
    26461 atattcccgt aaaagaagtc gaaaaacacg ttacaatagc cgggtactgg attttcgtga
    26521 gacaggaaga agatggacat taacaacaaa gcccgcattc attgggcatg ccgccgtggt
    26581 atgcgcgaac tcgatatttc aatcatgccg tttttcgaac atgagtacga cagcttaagc
    26641 gatgacgaaa aacgcatctt tattcgtctg ctggaatgtg acgatccgga cctgtttaac
    26701 tggctgatga atcacggtaa accggccgat gcagaactgg aaatgatggt ccgactcatc
    26761 cagacacgga accgggaacg tggtcctgtg gcaatctgat ttgcgcgtct cctggcgcgc
    26821 acagtggctt tccttgctga ttcatgggct ggttgccgct gttattttac tcatgccctg
    26881 gccgctcagt tacaccccgt tatggatggt gttactttcg ctggtggtat ttgattgcgt
    26941 tcgcagccag cggcgtatta atgctcgcca gggggaaatt cgattgttga tggacgggcg
    27001 tttgcgttgg caagggcagg agtggagcat cgtcaaagca ccgtggatga ttaagagcgg
    27061 catgatgctg cgtttacgtt ctgatggcgg taaacggcaa catttatggc tggcagccga
    27121 cagcatggac gaagctgaat ggcgggattt acggcggatt ttgttgcaac aagagacgca
    27181 aagataaata tgacggcaaa gcatatgcgc taagccgtca gtgagatcag gcgtaatgct
    27241 ctgccatttc gttgaggatt tgctcgcacc agctctgaat acgctcgtcg ctaaggtcat
    27301 actggttagt ttcatccagc gccagaccca cgaacagttg cccgtcagca atcaccggtt
    27361 tcgggctggt aaattcatat ccttccgttg gccagtagcc gacgaacttc acgcctttgg
    27421 tcgagagttt gtcatgcagc ataccgagcg catcgaggaa ccactcgccg tatcccagtt
    27481 gatcgccaag cccatacagc gcaacaattt taccttcaag gttcaggtcg tcgagctgat
    27541 cccagacggc ttcccagtct tcctggattt cgccaaaatc ccaggtcggg atacccagaa
    27601 tgagcacatc gtactgctcc attaatttcg gggagtcgtc cttgaggtta tgtaaggtca
    27661 ccagttctgg gccgataata tcgcggattt tttctgccgc catttcggtg taacaggtgc
    27721 tggaaccgta aaaaagaccc atattcataa cgtaagcttc tcgattctgc tgtggctttt
    27781 gcggctagtg tatcagaatc gctttagtca cggcacaata aggcataatg gatcaaatga
    27841 gtgaccataa ggggcgcaag tgaaacagga tctggcacgc atcgagcagt ttcttgatgc
    27901 tctgtggctg gaaaaaaatc tggctgaaaa tacgttgaac gcttaccgtc gcgatctgtc
    27961 aatgatggtg gagtggttgc atcaccgcgg gttgacgctg gcgacggcgc aaagtgacga
    28021 tttgcaggca ttactggcag aacggctaga gggcgggtat aaagccacca gctcagcgcg
    28081 tttgctgagt gcagtgcgcc gattgttcca gtatctttat cgcgaaaagt ttcgtgaaga
    28141 cgatcccagt gcgcatctcg cttcaccgaa attgccacag cgtttgccaa aagatttaag
    28201 cgaagcgcag gtcgaacgtt tattacaggc accattaatt gatcagccac tggagctacg
    28261 cgataaagcc atgcttgaag tgttgtatgc taccgggctg cgtgtctctg aactggtcgg
    28321 gctgacaatg agtgatatca gcctacgtca gggcgtagtg cgggtcattg gtaaaggcaa
    28381 caaagagcgc ctggtgccgt taggtgaaga ggccgtttac tggctggaaa cctatctgga
    28441 acatgggcgt ccgtggctgt tgaatggtgt gtcaattgac gtgttgtttc ccagccagcg
    28501 tgcgcagcag atgacgcgac agaccttctg gcaccgcatt aaacattatg ccgtgctggc
    28561 gggtatcgac agcgaaaagc tgtcaccgca tgtgttgcgt cacgcttttg ccactcattt
    28621 attaaatcat ggtgcggatt tacgcgtggt gcagatgcta ctgggccaca gcgatctctc
    28681 caccacgcaa atttatacgc atgtcgctac cgagcgtctg cggcaacttc atcaacagca
    28741 tcacccgcgg gcgtgatgtc tgaaaagaac gggaagattt atgaagaaag gttttatgtt
    28801 gtttactttg ttagcggcgt tttcaggctt tgctcaggct gatgacgcgg caattcaaca
    28861 aacgttagcc aaaatgggca ttaaaagcag cgatattcag ccagcacccg tggctggcat
    28921 gaagactgtg ctgactaaca gcggtgtgtt gtacatcacc gatgacggta aacatatcat
    28981 tcaggggcca atgtatgacg ttagtggcgc ggctccggtc aatgtcacca ataaaatgct
    29041 gctaaagcag ttgaatgcgc ttgaaaaaga gatgatcgtt tataaagcgc cgcaggaaaa
    29101 acacgtcatc accgtgttta ctgatattac ctgtgggtac tgccacaaac tgcatgagca
    29161 aatggcagac tacaacgcgc tggggatcac cgtgcgttat cttgctttcc cgcgccaggg
    29221 gctggagagc caggctgagc aacaaatgaa agccatctgg tgtgcgaaag ataaaaacaa
    29281 agcgtttgat gatgtgatgg ctggtaaagc tgccactccg gcaagttgcg atatcgatat
    29341 tgccgatcat tacgcacttg gcgtccagct tggcgttagc ggcactccgg caattgtgct
    29401 gagcaatggc acacttgttc cgggttacca gccgccgaaa gagatgaaag aattcctcga
    29461 cgaacaccaa aaaatgacca gcggtaatta attcgcgtga aacaacagat acaacttcgt
    29521 cgccgtgaag tcgatgaaac ggcagacttg cccgctgaat tgcctccctt gctgcgccgt
    29581 ttatacgcca gccggggagt acgcagtgcg caagaactgg aacgcagtgt taaaggtatg
    29641 ttgccctggc agcaactaag cggtgtcgaa aaggccgttg agatccttta caacgctttt
    29701 cgcgaaggaa cgcggattat tgtggtcggt gatttcgacg ccgacggcgc gaccagcacg
    29761 gctctaagcg tgctggcgat gcgctcgctt ggttgcagca atatcgacta cctggtacca
    29821 aaccgtttcg aagacggtta cggcttaagc ccggaagtgg tcgatcaggc ccatgcccgt
    29881 ggcgcgcagt taattgtcac ggtggataac ggtatttcct cccatgcggg ggttgaacac
    29941 gctcgctcgt tgggcattcc ggttattgtt accgatcacc atttgccagg cgaaacatta
    30001 cccgcggcgg aagcgatcat taaccctaac ttgcgcgact gtaatttccc gtcgaaatca
    30061 ctggcaggcg tgggtgtggc gttttatctg atgctggcgc tgcgcacctt tttgcgcgat
    30121 cagggctggt ttgatgagcg cggcatcgca attcctaacc tggcagaact gctggatctg
    30181 gtcgcgctgg ggacagtggc ggacgtcgtg ccgctggacg ctaataatcg cattctgacc
    30241 tggcagggga tgagtcgcat ccgtgccgga aagtgccgtc cagggattaa agcgctgctg
    30301 gaagtggcaa accgtgatgc acaaaaactc gccgccagcg atttaggttt tgcgctgggg
    30361 ccacgtctca atgctgccgg gcgactggac gatatgtccg tcggtgtggc gctgttgctg
    30421 tgcgacaaca tcggcgaagc gcgcgtgctg gcaaatgaac tcgatgcgct aaatcagacg
    30481 cgaaaagaga tcgaacaagg aatgcagatt gaagccttga ccctgtgcga gaaactggag
    30541 cgaagtcgcg acacgctacc cggcgggctg gcaatgtatc accccgaatg gcatcagggc
    30601 gttgtcggta ttctggcttc gcgcatcaaa gagcgttttc accgtccggt tatcgccttt
    30661 gcgccagcag gtgatggtac gctgaaaggt tccggtcgct ccattcaggg gctgcatatg
    30721 cgtgatgcgc tggagcgatt agacacactc taccccggta tgatgctgaa gtttggcggt
    30781 catgcgatgg cggcgggttt gtcgctggaa gaggataaat tcgaactctt tcaacaacgg
    30841 tttggcgagc tggttaccga gtggctggac ccttcgctat tgcaaggcga agtggtgtca
    30901 gacggcccgt taagcccggc cgaaatgacc atggaagtgg cgcagctgct gcgcgatgct
    30961 ggcccgtggg ggcagatgtt cccggagccg ctgtttgatg gtcatttccg tctgctgcaa
    31021 cagcggctgg tgggcgaacg tcatttgaaa gtcatggtcg aaccggtcgg cggcggtccg
    31081 ctgctggatg gtattgcttt taatgtcgat accgccctct ggccggataa cggcgtgcgc
    31141 gaagtgcaac tggcttacaa gctcgatatc aacgagtttc gcggcaaccg cagcctgcaa
    31201 attatcatcg acaatatctg gccaatttag cgtcatcttc tctataaaaa agagcgtgga
    31261 ttgggtacaa tcccgctctt atcaccgcat tttgactagc tcaataaaag aaatcagacc
    31321 atgtttgaaa ttaatccggt aaataatcgc attcaggacc tcacggaacg ctccgacgtt
    31381 cttagggggt atctttgact acgacgccaa gaaagagcgt ctggaagaag taaacgtcga
    31441 gctggaacag ccggatgtct ggaacgaacc cgaacgcgca caggcgctgg gtaaagagcg
    31501 ttcctccctc gaagccgttg tcgacaccct cgaccaaatg aaacaggggc tggaagatgt
    31561 ttctggtctg ctggaactgg ctgtagaagc tgacgacgaa gaaaccttta acgaagccgt
    31621 tgctgaactc gacgccctgg aagaaaaact ggcgcagctt gagttccgcc gtatgttctc
    31681 tggcgaatat gacagcgccg actgctacct cgatattcag gcggggtctg gcggtacgga
    31741 agcacaggac tgggcgagca tgcttgagcg tatgtatttg cgctgggcag aatcgcgtgg
    31801 tttcaaaact gaaatcatcg aagagtcgga aggtgaagtg gcgggtatta aatccgtgac
    31861 gatcaaaatc tccggcgatt acgcttacgg ctggctgcgt acagaaactg gcgttcaccg
    31921 cctggtgcgt aagagcccgt ttgactccgg cggtcgtcgc cacacgtcgt tcagctccgc
    31981 gtttgtttat ccggaagttg atgatgatat tgatatcgat atcaacccgg cggatctgcg
    32041 cattgacgtt tatcgcgcgt ccggcgcggg cggtcagcac gttaaccgta ccgaatctgc
    32101 ggtgcgtatt acccacatcc cgaccgggat cgtgacccag tgccagaacg accgttccca
    32161 gcacaagaat aaagaccagg ccatgaagca gatgaaagcg aagctttatg aactggagat
    32221 gcagaagaaa aatgctgaga aacaggcgat ggaagataac aaatccgaca tcggctgggg
    32281 cagccagatt cgttcttatg tccttgatga ctcccgcatt aaagatctgc gcaccggggt
    32341 tgaaacccgc aatacgcagg ccgtgctgga cggcagcctg gatcaattta tcgaagcaag
    32401 tttgaaagca gggttatgag gaaccaacat gtctgaacaa cacgcacagg gcgctgacgc
    32461 ggtagtcgat cttaacaatg aactgaaaac gcgtcgtgag aagctggcga acctgcgtga
    32521 gcagggaatt gccttcccga acgatttccg tcgcgatcat acctctgacc aattgcacgc
    32581 agaattcgac ggtaaagaga acgaagaact ggaagcgctg aacatcgaag tcgccgttgc
    32641 tggccgcatg atgacccgcc gtattatggg taaagcctct tttgttaccc tgcaggacgt
    32701 tggcggtcgt attcagctgt acgttgcccg tgacgatctt ccggaaggcg tttacaacga
    32761 gcagttcaaa aaatgggatc tcggcgacat cctcggcgcg aaaggtaaac tgttcaaaac
    32821 caaaaccggc gaactgtcta tccactgcac cgagctgcgt ctgctgacca aagcactgcg
    32881 tccgctgccg gacaaattcc acggcttgca ggatcaggaa gcgcgctatc gtcagcgtta
    32941 tctggatctc atctctaacg atgaatcccg caacaccttt aaagtgcgtt cgcagatcct
    33001 ctctggcatt cgccagttca tggtaaatcg cggctttatg gaagttgaaa cgccgatgat
    33061 gcaggtgatc ccaggcggtg ccgctgcgcg tccgtttatc acccatcata acgcgctgga
    33121 tcttgacatg tacctgcgta tcgcgccgga actgtacctc aagcgtctgg tggtcggtgg
    33181 cttcgagcgt gtattcgaaa tcaaccgtaa cttccgtaac gaaggtattt ccgtacgtca
    33241 taacccagag ttcaccatga tggaactcta tatggcttac gcagattaca aagatctgat
    33301 cgagctgacc gaatcgctgt tccgtactct ggcacaggat attctcggta agacggaagt
    33361 cacctacggc gacgtgacgc tggacttcgg taaaccgttc gaaaaactga ccatgcgtga
    33421 agcgatcaag aaatatcgcc cggaaaccga catggcggat ctggacaact tcgactctgc
    33481 aaaagcgatt gctgaatcta tcggcatcca cgttgagaag agctggggtc tgggccgtat
    33541 cgttaccgag atcttcgaag aagtggcaga agcacatctg attcagccga ccttcattac
    33601 taaatatccg gcagaagttt ctccgctggc gcgtcgtaac gacattaacc cggaaatcac
    33661 agaccgcttt gagttcttca tcggtggtcg tgaaatcggt aacggcttta gcgagctgaa
    33721 tgacgcggaa gatcaggcgc agcgcttcct ggatcaggtt gccgcgaaag acgcaggtga
    33781 cgacgaagcg atgttctacg acgaagatta cgtcaccgca ctggaacacg gcttaccgcc
    33841 gacagcaggt ctgggaattg gtatcgaccg tatggtaatg ctgttcacca acagccatac
    33901 catccgcgac gttattctgt tcccggcgat gcgtccagta aaataagcat tacgttatgc
    33961 taataacccc ggcaaatgtc ggggtttttt aattgtgctg cgcgaaagca gacaacaatt
    34021 ttcttgcttc actattggct gcctgcatta ccatccacgg actgaacgcc cacggcgtgg
    34081 catcaatacc gtgtaataca tctgctaaat cacaccattg ataatccatc acttcatcat
    34141 cgttgatctg taacgcactg ttggtgcgtg cggcaaatac cggacacact tcattttcca
    34201 caatgccatt cggatcggtg gcgcgatagc gaaagtcagg atagatagat tcaggaggcg
    34261 taatttccac gccaagctca taacggcaac ggcggatcac tgcgtcttcg ttgctttctc
    34321 ccagttgtgg gtgcccacaa accgagttag tccacacgcc aggccatgct tttttgctca
    34381 gtgcgcggcg ggtaactaat aattgcccct tggcattaaa cagccaactg gagaacgcga
    34441 gatgtaagag ggtgtctgcc gtgtgtgcgg catacttttc cagcgtaccc gtgggaactc
    34501 cctgtgcatt caataaaatg acgtgttccg tttgcataat ttctcacatg taattctgat
    34561 cactcatcat tatagataat tgaagagtga aatgattaac caagtgagcg tttatcgaca
    34621 accgcccgtt ttgagcggat gccgacaggt aaaaaccatt taaaaaagta gcatcatata
    34681 tttgaagcga ctttcaatgg ccattgcaac acagtcagaa atgacaggaa tagagagagt
    34741 aaaaagcaac agcagactga atatagcgcg cattaaaaga tttatattat tctccatgct
    34801 catttttctt cagcttgcgc atcagaagcc acatacgtac tgtcctgact tttaaatctt
    34861 tatcagagac ggattccttc accaggtcag catgatgctg atagccatta aagaagacgt
    34921 tcagcacaac ggcgctaagg gttgcgagca taatgccgct atgtagcagc ggttgcagta
    34981 cggccggtaa cttagaaaag aaatcgtgag agagcgtcgg agtcatgcca acgccgagac
    35041 tgatcgccac aatatagagg ttgtaacggt tggtggtgta gttacagcgc gacagaattc
    35101 gaatccctgt cgccagtacc atgccgaaca tcactagacc agcgccgccc agcacaaatt
    35161 gcggaatgga ggctaccagc accgccattt ttggcaccat gccaaacagg attaatataa
    35221 ttcccgaaga aatacacacc cagcggctat gaacgcgcgt cacgctaacc aggccaacgt
    35281 tttgagaaaa tgacgtgtgg gggaagctgt taaacgtgcc gcctatcatt gtccctacgc
    35341 catcgacacg cagcccgcga ataatatcgt gtgaagagag tttacgaccg actatttcac
    35401 ccagtgccag gaacatcccc atcgactcga taaacacgat gattaacacg gcagtcatgg
    35461 tcagaatgga aacgggatcg aaaatcggca taccaaacga catcggggtg acaatcgcaa
    35521 accacaaggc atcatgtagc ccggataaat tgacttcatt catcatccac gaaagtaaaa
    35581 agccaaatac aatccccagt aatacggcga cgttggacat aaatcctttc gcatagcgag
    35641 taatgagcaa gataaaaatt aagacggcaa aggagatacc tgaataaacg ggattaccat
    35701 attgcggatt ccctttacct ccggcggccc agtcaatacc cacctgaatg atgctaagtc
    35761 cgacagaagt aataaccaca ccggtaacca gtggcgggaa taaaggcatc aagcgaccga
    35821 taagtggcgc taataatgtg gtgataaaac ccgcggcgat agtggcacca aatatcccca
    35881 gcaggccaat atccgggttc atcccaatgg ctatcattgg tgttacagca gcaaaggtca
    35941 ccgacataat caccggcagg cggatcccca taaagcggcc gataccgata cattgcaata
    36001 atgtgacgat cccgcagcaa aagagatccg agctaatgag catcgcaata gcttcttttg
    36061 agaggcccag tcggtcacca atcataagag gaacagcgac tgcacctgcg tacatgacaa
    36121 ggacgtgttg cagaccgagt atgatcagct ttcctggtga taatatgcgg tcaacctcat
    36181 cagttgggcg gtcttgccca gaagatgaga gaagttggga atctatggcg ctcatcagtg
    36241 tttctccttt cgcccgccag agtaaaaagc aaccgtttac gttaatgaaa ctgtctaaac
    36301 acatgctcgt ggagtgccag tttttgcgag gaaggggagt tagagacagg aattgcggag
    36361 gcaatcacat aatcgtggtt aaaccacgaa aatgagaaga gaacctgaca atggaattat
    36421 ctgtaatttt ctcatattga tatttcatta atcattctgg catgtcgtac tctcgcattt
    36481 aatcgttttt atctggatag cactcttttg atcggcaatg ttgaaataat gaaagcggca
    36541 tagattgagg ggcaataatt tgaactcagt cgcaaaatta taattaaaac ggtcatgcta
    36601 cctaatatat gcccgtt
//
LOCUS       DADMJE010000021        36223 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.021, whole genome shotgun sequence.
ACCESSION   DADMJE010000021 DADMJE010000000
VERSION     DADMJE010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 36223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36223
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.021"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(50..1699)
                     /gene="actP"
                     /locus_tag="JN001_000950"
     CDS             complement(50..1699)
                     /gene="actP"
                     /locus_tag="JN001_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation/acetate symporter ActP"
                     /protein_id="HAY9052261.1"
                     /translation="MKRVLTALAATLPFAANAADAISGAVERQPTNWQAIIMFLIFVV
                     FTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGISALVFTSGYD
                     GLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASYRLKQGPIRILSACGSLVVVAL
                     YLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLATTWVQIIKAVLLLFG
                     ASFMAFMVMKHVGFSFNNLFSEAMAVHPKGVDIMKPGGLVKDPISALSLGLGLMFGTA
                     GLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGAIMLVGANPEYKDAAG
                     HLIGGNNMAAVHLANAVGGNLFLGFISAVAFATILAVVAGLTLAGASAVSHDLYANVF
                     KKGATEREELRVSKITVLILGVIAIILGMLFENQNIAFMVGLAFAIAASCNFPIILLS
                     MYWSKLTTRGTMLGGWLGLITAVVLMILGPTIWVQILGHEKAIFPYEYPALFSISVAF
                     LGIWFFSATDNSAEGARERELFRAQFIRSQTGFGVEQGRAH"
     gene            complement(1696..2010)
                     /locus_tag="JN001_000951"
     CDS             complement(1696..2010)
                     /locus_tag="JN001_000951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF485 domain-containing protein"
                     /protein_id="HAY9052262.1"
                     /translation="MNGTIYQRIEDNAHFRELVEKRQRFATILSIIMLAVYIGFILLI
                     AFAPGWLGTPLNPNTSVTRGIPIGVGVIVISFVLTGIYIWRANGEFDRLNNEVLHEVQ
                     AS"
     gene            complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JN001_000952"
                     /pseudo
     CDS             complement(2142..4101)
                     /gene="acs"
                     /locus_tag="JN001_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006816721.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase"
     gene            4494..5930
                     /gene="nrfA"
                     /locus_tag="JN001_000953"
     CDS             4494..5930
                     /gene="nrfA"
                     /locus_tag="JN001_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-forming nitrite reductase cytochrome
                     c552 subunit"
                     /protein_id="HAY9052263.1"
                     /translation="MTRIKINARRIFSLLIPFFFFTSVHAEQTAAPAKPVTVEAKNET
                     FAPQHPDQYLSWKATSEQSERVDALAEDPRLVILWAGYPFSRDYNKPRGHAFAVTDVR
                     ETLRTGAPKNAEDGPLPMACWSCKSPDVARLIQKDGEDGYFHGKWARGGPEIVNNLGC
                     ADCHNTASPEFAKGKPELTLSRPYAARAMEAIGKPFEKAGRFDQQSMVCGQCHVEYYF
                     DGKNKAVKFPWDDGMKVENMEQYYDKIAFSDWTNSLSKTPMLKAQHPEYETWTAGIHG
                     KNNVTCIDCHMPKVQNAEGKLYTDHKIGNPFDNFAQTCANCHTQDKAALQKVVAERKQ
                     SINDLKIKVEDQLVHAHFEAKAALDAGATEAEMKPIQDDIRHAQWRWDLAIASHGIHM
                     HAPEEGLRMLGTAMDKAADARTKLARLLATKGITHEIQIPDISTKEKAQQAIGLNMEQ
                     IKAEKQDFIKTVIPQWEEQARKNGLLSQ"
     gene            5975..6541
                     /gene="nrfB"
                     /locus_tag="JN001_000954"
     CDS             5975..6541
                     /gene="nrfB"
                     /locus_tag="JN001_000954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418495.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase pentaheme
                     subunit"
                     /protein_id="HAY9052264.1"
                     /translation="MSVLRSLLTAGVLASGLLWSLNGITATPAAQASGDRYEVTQQRN
                     PDAACLDCHKPDTEGMHGKHASVINPNNKLPVTCTNCHGQPSPQHREGVKDVMRFNEP
                     MYKVGEQNSVCMSCHLPEQLQKAFWPHDVHVTKVACASCHSLHPQQDTMQTLSDKGRI
                     KICVDCHSDQRTNPNFNPASVPLLKEQP"
     gene            6538..7209
                     /gene="nrfC"
                     /locus_tag="JN001_000955"
     CDS             6538..7209
                     /gene="nrfC"
                     /locus_tag="JN001_000955"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase Fe-S protein"
                     /protein_id="HAY9052265.1"
                     /translation="MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDES
                     LCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVD
                     VCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNL
                     QAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKY
                     GEVSQ"
     gene            7206..8162
                     /gene="nrfD"
                     /locus_tag="JN001_000956"
     CDS             7206..8162
                     /gene="nrfD"
                     /locus_tag="JN001_000956"
                     /EC_number="1.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c nitrite reductase subunit NrfD"
                     /protein_id="HAY9052266.1"
                     /translation="MTQTSAFHFESLVWDWPIAIYLFLIGISAGLVTLAVLLRRFYPQ
                     AGGADSTLLRTTLIVGPGAVILGLLILVFHLTRPWTFWKLMFHYSFTSVMSMGVMLFQ
                     LYMVVLVLWLAKIFEHDLLAQQQRWLPKLGIVQKVLSLLTPVHRGLETLMLVLAVLLG
                     AYTGFLLSALKSYPFLNNPILPVLFLFSGISSGAAVALIAMAIRQRSNPHSTEAHFVH
                     RMEIPVVWGEIFLLVAFFVGLALGDDGKVRALVAALGGGFWTWWFWLGVAGLGLIVPM
                     LLKSWVNRSSGIPAVLAACGASLVGVLMLRFFILYAGQLTVA"
     gene            8182..9900
                     /locus_tag="JN001_000957"
     CDS             8182..9900
                     /locus_tag="JN001_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014640253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY9052267.1"
                     /translation="MDVFLPEVGFLALLLSLGVNVLTPLTAFAGVRLRWPAMMRLTCI
                     GILAQCALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLW
                     VLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEG
                     RDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDAASARICWRWALPGW
                     SALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFRH
                     WSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGW
                     RARDGGPAVRFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPY
                     FNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGIVVSSVSRQEISLN
                     LQPGQQVTLAGYTFRFERLDLQAKGNYTSEKAIVALFDHQQRIGELMPERRFYEARRQ
                     QMMEPSIRWNGIHDWYVVMGEKTGADRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWR
                     GRKRDE"
     gene            9893..10276
                     /gene="nrfF"
                     /locus_tag="JN001_000958"
     CDS             9893..10276
                     /gene="nrfF"
                     /locus_tag="JN001_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfF"
                     /protein_id="HAY9052268.1"
                     /translation="MNKGLLTLLLLFTCFARAQVVDTWQFANPQQQQQALNIASQLRC
                     PQCQNQNLLESNAPVAVSMRHQVYSMVAEGKNEVEIIGWMTERYGDFVRYNPPLTGQT
                     LVLWALPVVLLLLMALILWRVRAKR"
     gene            10273..10869
                     /gene="nrfG"
                     /locus_tag="JN001_000959"
     CDS             10273..10869
                     /gene="nrfG"
                     /locus_tag="JN001_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase NrfEFG subunit NrfG"
                     /protein_id="HAY9052269.1"
                     /translation="MKEPKIPVKMLTTLTILMVFLCVGSYLLSPKWQAVHAEYQRQRD
                     PLHQFASQQTPEAQLQALQDKIRANPQNSEQWALLGEYYLWQNDYSNSLLAYRQALQL
                     RGENAELYAALATVLYYQASQHMTAQTRAMIDKALALDSNEITALMLLASDAFMQANY
                     AQAIELWQKVMDLNSPRINRTQLVESINMAKLLQRRSD"
     gene            11210..12523
                     /gene="gltP"
                     /locus_tag="JN001_000960"
     CDS             11210..12523
                     /gene="gltP"
                     /locus_tag="JN001_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate:proton symporter GltP"
                     /protein_id="HAY9052270.1"
                     /translation="MKNIKFSLAWQILFAMVLGILLGSYLHYHSDSRDWLVVNLLSPA
                     GDIFIHLIKMIVVPIVISTLVVGIAGVGDAKQLGRIGAKTIIYFEVITTVAIILGITL
                     ANVFQPGAGVDMSQLATVDISKYQSTTEAVQSSSHGIMGTILSLVPTNIVASMAKGEM
                     LPIIFFSVLFGLGLSSLPATHREPLVTVFRSISETMFKVTHMVMRYAPVGVFALIAVT
                     VANFGFSSLWPLAKLVLLVHFAILFFALVVLGIVARLCGLSVWILIRILKDELILAYS
                     TASSESVLPRIIEKMEAYGAPASITSFVVPTGYSFNLDGSTLYQSIAAIFIAQLYGID
                     LSIWQEIILVLTLMVTSKGIAGVPGVSFVVLLATLGSVGIPLEGLAFIAGVDRILDMA
                     RTALNVVGNALAVLVIAKWEHKFDRKKALAYEREVLGKFDKTADQ"
     gene            complement(12714..12968)
                     /locus_tag="JN001_000961"
                     /pseudo
     CDS             complement(12714..12968)
                     /locus_tag="JN001_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005118502.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
     gene            complement(12953..13402)
                     /locus_tag="JN001_000962"
     CDS             complement(12953..13402)
                     /locus_tag="JN001_000962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005045755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY9052271.1"
                     /translation="MKKIIALMLFLTFFAHANDSEPGSQYLKAAEAGDRRAQYFLADS
                     WFSSGDLSKAEYWAQKAADSGDADACALLAQIKITNPGSLDYPQAKVLAEKAAQAGSK
                     EGEVTLAHILVNTQAGKPDYPKAISLLEKPRKIWRTTLPSMPKCCLV"
     gene            complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JN001_000963"
     CDS             complement(13496..15643)
                     /gene="fdhF"
                     /locus_tag="JN001_000963"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(15224..15226),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HAY9052272.1"
                     /translation="MKKVVTVCPYCASGCKINLVVDNGKIVRAEAAQGKTNQGTLCLK
                     GYYGWDFINDTQILTPRLKTPMIRRQRGGKLEPVSWDEALNYVAERLSAIKEKYGPDA
                     IQTTGSSRGTGNETNYVMQKFARAVIGTNNVDCCARVUHGPSVAGLHQSVGNGAMSNA
                     INEIDNTDLVFVFGYNPADSHPIMANHVINAKRNGAKIIVCDPRKIETARIADMHIAL
                     KNGSNIALLNAMGHVIIEENLYDKAFVASRTEGFEEYRKIVEGYTPESVEDITGVSAS
                     EIRQAARMYAQAKSAAILWGMGVTQFYQGVETVRSLTSLAMLTGNLGKPHAGVNPVRG
                     QNNVQGACDMGALPDTYPGYQYVKDPANREKFAKAWGVESLPAHTGYRISELPHRAAH
                     GEVRAAYIMGEDPLQTDAELSAVRKAFEDLELVIVQDIFMTKTASAADVILPSTSWGE
                     HEGVFTAADRGFQRFFKAVEPKWDLKTDWQIISEIATRMGYPMHYNNTQEIWDELRHL
                     CPDFYGATYEKMGEQGFIQWPCRDTSDADQGTSYLFKEKFDTPNGLAQFFTCDWVAPI
                     DKLTDEYPMVLSTVREVGHYSCRSMTGNCAALAALADEPGYAQINTEDAKRLGIEDEA
                     LVWVHSRKGKIITRAQVSDRPNKGAIYMTYQWWIGSCNELVTENLSPITKTPEYKYCA
                     VRVEPIADQRAAEQYVIDEYNKLKTRLREAALA"
     gene            complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JN001_000964"
     CDS             complement(15841..17307)
                     /gene="mdtP"
                     /locus_tag="JN001_000964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter outer membrane
                     subunit MdtP"
                     /protein_id="HAY9052273.1"
                     /translation="MINRQLSRLLLCSILGSTTLISGCALVRKDSAPHQQLKPEQIKL
                     ADDIHLASSGWPQAQWWKQLNDPQLDALIQRTLSGSHTLAEAKLREEKAQSQADLLDA
                     GSQLQVAALGMLNRQRVSANGFLSPYAMDAPSLGMDGPYYTEATVGLFAGLDLDLWGV
                     HRSAVAAAIGAHNAALAETAAVELSLTTGVAQLYYSMQASYQMLDLLEQTRDVIDYAV
                     KAHQSKVAHGLEAQVPFHGARAQILAVDKQIAAVKGQITETRESLRALIGAGASDMPE
                     IKPVALPRVQTGIPATLSYELLARRPDLQAMRWYVQASLDQVDSARALFYPSFDIKAF
                     FGLDSIHLDTLFKKTSRQFNFIPGLKLPLFDGGRLNANLEGTRAASNMMIERYNQSVL
                     NAVRDVAVNGTRLQTLNDEREMQAERVEATRFTQRAAEAAYQRGLTSRLQATEARLPV
                     LAEEMSLLMLDSRRVIHSIQLMKSLGGGYQAAPVVEKK"
     gene            complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JN001_000965"
     CDS             complement(17304..19355)
                     /gene="mdtO"
                     /locus_tag="JN001_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418505.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter permease subunit
                     MdtO"
                     /protein_id="HAY9052274.1"
                     /translation="MSALNSLPLPVVRLLAFFHEELSERRPGRVPQIVQLWVGCLLVI
                     LISMTFEIPFVALSLAVLFYGIQSNAFYTKFVAILFVVATVLEIGSLFLIYKWSYGEP
                     LIRLIIAGPILMGCMFLMRTHRLGLVFFAVAIVAIYGQTFPAMLDYPEVVVRLTLWCI
                     VVGLYPTLLMTLIGVLWFPSRAISQMHQALNDRLDDAISHLTDSLAPLPETRIEREAL
                     ALQKLNVFCLADDANWRTQSAWWQSCVATVTYIYSTLNRYDPTSFADSQAIIEFRQKL
                     ASEINKLQHAVAEGQCWQSDWRISESEAVAARECNLENICQTLLQLGQMNPNTPPTPA
                     AKPPSMVADAFTNPDYIRYAVKTLLACLICYTFYSGVDWEGIHTCMLTCVIVANPNVG
                     SSYQKMVLRFGGAFCGAILALLFTLLVMPWLDNIVELLFVLAPIFLLGAWIATSSERS
                     SYIGTQMVVTFALATLENVFGPVYDLVEIRDRALGIIIGTVVSAVIYTFVWPESEART
                     LPQKLAGALGMLSKVMRIPRQQEVTALRTYLQIRIGLHAAFNACEEMCQRVALERQLD
                     SEERALLIERSQTVIRQGRDLLHAWDATWNSAQALDNALQPDRAGQFADALEKYAAGL
                     ATALSCSPQITLEETPASQAILPTLLKQEQHVCQLFARLPDWTAPALTPATEQAQGAT
                     Q"
     gene            complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JN001_000966"
     CDS             complement(19355..20386)
                     /gene="mdtN"
                     /locus_tag="JN001_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter periplasmic adaptor
                     subunit MdtN"
                     /protein_id="HAY9052275.1"
                     /translation="MESTPKKAPRSKFPALLVVALALVALVFVIWRVDSAPSTNDAYA
                     SADTIDVVPEVSGRIVELAVTDNQAVKQGDLLFRIDPRPYEANLAKAEASLAALDKQI
                     MLTQRSVDAQQFGADSVNATVEKARAAAKQATDTLRRTEPLLKEGFVSAEDVDRARTA
                     QRAAEADLNAVLLQAQSAASAVSGVDVLVAQRAAVEADIALTKLHLEMATVRAPFDGR
                     VISLKTSVGQFASAMRPIFTLIDTRHWYVIANFRETDLKNIRSGTPATIRLMSDSGKT
                     FEGKVDSIGYGVLPNDGGLVLGGLPKVSRSINWVRVAQRFPVKIMVDKPDPEMFRIGA
                     SAVANLEPQ"
     gene            complement(20405..20680)
                     /locus_tag="JN001_000967"
     CDS             complement(20405..20680)
                     /locus_tag="JN001_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052276.1"
                     /translation="MPTVLSRMAMQLKKTAWIIPVFMVSGCSLSPAIPVIGAYYPSWF
                     FCAIASLILTLITRRIIQRANINLAFVGIIYTALFAVYAMLFWLAFF"
     gene            complement(20889..22874)
                     /gene="yjcS"
                     /locus_tag="JN001_000968"
     CDS             complement(20889..22874)
                     /gene="yjcS"
                     /locus_tag="JN001_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkyl sulfatase YjcS"
                     /protein_id="HAY9052277.1"
                     /translation="MNNSRLFRLSRIVIALTAASGMMVNTANAKEEAKAATQYTQQVN
                     QNYAKSLPFSDRQDFDDAQRGFIAPLLDEGILRDANGKPYYRGEDYKFDINAPAPETV
                     NPSLWRQSQLNGISGLFKVTDRMYQVRGQDISNITFIEGDTGIIVIDPLVTPPSAKAA
                     LDLYFQNRPQKPIVAVIYTHSHTDHYGGVKGIISEADVKSGKVQVIAPAGFMDEAISE
                     NVLAGNIMSHRALYSYGLLLAHNPQGNIGNGLGVTLASGYPSIIAPNKTITKTGEKMI
                     IDGLEFDFLMTPGSEAPAEMHFYIPALKALCTAENATHTLHNFYTLRGAKTRDTSKWT
                     EYLNETLDMWGNDAEVLFMPHTWPVRGNKHINDYIGKYRDTIKYIHDQTLHLANQGYT
                     MNEIGDMIKLPPALANNWASRGYYGSVSHNARAVYNFYLGYYDGNPANLHPYGQVEMG
                     KRYVQALGGSARVISLAQEANKQGDYRWSAELLKQVIAANPGDQVAKNLQANNFEQLG
                     YQAESATWRGFYLTGAKELREGVHKFSHGTTGSPDTIRGMSVEMLFDFMSVRLDSAKA
                     AGKNISLNFNMSNGDNLNLTLNDSVLNYRKTLQPQADASFYISREDLHAVLTGQAKMA
                     DLVKAKKAKIIGNGAKLEEIIACLDNFDLWVNIVTPN"
     gene            23127..23444
                     /locus_tag="JN001_000969"
     CDS             23127..23444
                     /locus_tag="JN001_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase"
                     /protein_id="HAY9052278.1"
                     /translation="MQPVFLFKKRTGAMGGHVAGTAGFCVAVPAFYSWSMSEVIDKDT
                     RSSERTDYPHYASEVALAFGSRVVGLELAKMIVDAWLGAQYEGGRHQQRVEAITAIEQ
                     RRN"
     gene            23513..23842
                     /gene="yjdP"
                     /locus_tag="JN001_000970"
     CDS             23513..23842
                     /gene="yjdP"
                     /locus_tag="JN001_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YjdP"
                     /protein_id="HAY9052279.1"
                     /translation="MKRFPLFLLFTLLTLSTVPAQADIIDDTIGNIQQAINDAYNPDR
                     GRDYEDSRDDGWQREVSDDRRRQYDDRRRQFEDRRRQLDDRQRQLDQERRQLEDEERR
                     MEDEYGR"
     gene            complement(23989..24747)
                     /gene="phnP"
                     /locus_tag="JN001_000971"
     CDS             complement(23989..24747)
                     /gene="phnP"
                     /locus_tag="JN001_000971"
                     /EC_number="3.1.4.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism protein PhnP"
                     /protein_id="HAY9052280.1"
                     /translation="MSLTLTLTGTGGAQGVPAWGCECVACARARRSPQYRRQPCSGVV
                     KFNDAITLIDAGLHDLADRWPPGSFQQFLLTHYHMDHVQGLFPLRWGVGDPIPVYGPP
                     DEQGCDDLFKHPGLLDFSHTVEPFVVFDLQGLQVTPLPLNHSKLTFGYLLETAHSRVA
                     WLSDTAGLPEKTLKFLRNNQPQVMVIDCSHPPREDAPRSHCDLNTVLALNQVIRSPRV
                     ILTHISHQFDAWLMENALPSGFEAGFDGMEIGVA"
     gene            complement(24749..25213)
                     /gene="phnO"
                     /locus_tag="JN001_000972"
     CDS             complement(24749..25213)
                     /gene="phnO"
                     /locus_tag="JN001_000972"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoalkylphosphonate N-acetyltransferase"
                     /protein_id="HAY9052281.1"
                     /translation="MPACELRPATQYDTDAVYALICELKQAEFDHHAFRVGFNANLRD
                     PSMRYPSMRYPSMRYHLALLDGEVVGMIGLHLQFHLHHVNWIGEIQELVVMPQACGLN
                     VGSKLLAWAEEEARQAGAEMTELSTNVKRHDAHRFYLREGYEQSHFRFTKAL"
     gene            complement(25200..25757)
                     /gene="phnN"
                     /locus_tag="JN001_000973"
     CDS             complement(25200..25757)
                     /gene="phnN"
                     /locus_tag="JN001_000973"
                     /EC_number="2.7.4.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 1,5-bisphosphokinase"
                     /protein_id="HAY9052282.1"
                     /translation="MMGKLIWLMGPSGSGKDSLLAELRLREQTQLLVAHRYITRDASA
                     GSENHIALSEREFFTRAGQNLLALSWHANGLYYGVGIEIDLWLHAGFDVVVNGSRAHL
                     PQARARYQSALLPVCLQVSPEILRQRLKNRGRENTSEINARLARAARYTPQDCHTLNN
                     DGSLRQSVDTLLTLIHQKEKHHACL"
     gene            complement(25757..26893)
                     /gene="phnM"
                     /locus_tag="JN001_000974"
     CDS             complement(25757..26893)
                     /gene="phnM"
                     /locus_tag="JN001_000974"
                     /EC_number="3.6.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate diphosphatase"
                     /protein_id="HAY9052283.1"
                     /translation="MIINNVKLVLENEVVHGSLEVQDGEIRAFAESQSRLPEAMDGEG
                     GWLLPGLIELHTDNLDKFFTPRPKVDWPAHSAMSSHDALMVASGITTVLNAVAIGDVR
                     DGGDQLENLEKMINTIEETQKRGVNRAEHRLHLRCELPHHTTLPLFEKLVQREPVTLV
                     SLMDHSPGQRQFANREKYREYYQGKYSLTDAQMQQYEEEQLALAARWSQPNRESIAAL
                     CRARQIALASHDDATHAHVAESHQLGSVIAEFTTTFEAAEASRKHGMNVLMGAPNIVR
                     GGSHSGNVAASELAQLGLLDILSSDYYPASLLDAAFRVADDESNRFTLPQAVRLVTKN
                     PAQALNLQDRGVIGEGKRADLVLAHRQGNHIHIDHVWRQGKRVF"
     gene            complement(26890..27570)
                     /gene="phnL"
                     /locus_tag="JN001_000975"
     CDS             complement(26890..27570)
                     /gene="phnL"
                     /locus_tag="JN001_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnL"
                     /protein_id="HAY9052284.1"
                     /translation="MINVQNVSKTFILHQQNGVRLPVLQRASLTVNAGECVVLHGHSG
                     SGKSTLLRSLYANYLPDEGQIQIKHGDEWVDLVTAPARKVVEIRKTTVGWVSQFLRVI
                     PRISALEVVMQPLLDTGVPREACAAKAARLLTRLNVPERLWHLAPSTFSGGEQQRVNI
                     ARGFIVDYPILLLDEPTASLDAKNSAAVVELIHEAKARGAAIVGIFHDEAVRNDVADR
                     LHPMGASS"
     gene            complement(27681..28439)
                     /gene="phnK"
                     /locus_tag="JN001_000976"
     CDS             complement(27681..28439)
                     /gene="phnK"
                     /locus_tag="JN001_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnK"
                     /protein_id="HAY9052285.1"
                     /translation="MNQPLLSVNNLTHLYAPGKGFSDVSFDLWPGEVLGIVGESGSGK
                     TTLLKSISARLTPQQGEIHYESRSLYAMSEADRRRLLRTEWGVVHQHPLDGLRRQVSA
                     GGNIGERLMATGARHYGDIRATAQKWLEEVEIPANRIDDLPTTFSGGMQQRLQIARNL
                     VTHPKLVFMDEPTGGLDVSVQARLLDLLRGLVVELNLAVVIVTHDLGVARLLADRLLV
                     MKQGQVVESGLTDRVLDDPHHPYTQLLVSSVLQN"
     gene            complement(28436..29281)
                     /gene="phnJ"
                     /locus_tag="JN001_000977"
     CDS             complement(28436..29281)
                     /gene="phnJ"
                     /locus_tag="JN001_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate 5-phosphate
                     C-P-lyase PhnJ"
                     /protein_id="HAY9052286.1"
                     /translation="MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPM
                     PYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDAT
                     LIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYED
                     IARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPP
                     FTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQS
                     EAKNQ"
     gene            complement(29274..30332)
                     /gene="phnI"
                     /locus_tag="JN001_000978"
     CDS             complement(29274..30332)
                     /gene="phnI"
                     /locus_tag="JN001_000978"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-ribose 1-methylphosphonate
                     5-triphosphate synthase subunit PhnI"
                     /protein_id="HAY9052287.1"
                     /translation="MYVAVKGGEKEIDAAHALQESRRRGNTDLPELSVAQIEQQLNLA
                     VDRVMTEGGIADRELAALALKQASGDNVEAIFLLRAYRTTLAKLAVSEPLDTTEMRLE
                     RRISAVYKDIPGGQLLGPTYDYTHRLLDFTLLANGEAPTLTTADSEQSPSPHVFSLLA
                     RQGLAKFEEDSGAQPDDITRTPPVYPCSRSSRLQQLMRGDEGYLLALAYSTQRGYGRN
                     HPFAGEIRSGYIDVSIMPEELGFAVNVGELLMTECEMVNGFIDPPDEPPHFTRGYGLV
                     FGMSERKAMALVDRALQAPEYGEHATGPAQDEEFVLAHADNVEAAGFVSHLKLPHYVD
                     FQAELELLKRLQQEQNHG"
     gene            complement(30332..30916)
                     /gene="phnH"
                     /locus_tag="JN001_000979"
     CDS             complement(30332..30916)
                     /gene="phnH"
                     /locus_tag="JN001_000979"
                     /EC_number="2.7.8.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnH"
                     /protein_id="HAY9052288.1"
                     /translation="MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPL
                     NIATTSVLLTLADNDTPVWLSAPLSNDIVSQSLRFHTNAPLVNQSELATFAVTDEAIS
                     SEQLNALSSGTAVAPEAGATLILQVVSLSGGRMLRLTGAGIAEERMIAPQLPECILHE
                     LTERPHPFPLGIDLILTCGERLLAIPRTTHVEVC"
     gene            complement(30913..31365)
                     /gene="phnG"
                     /locus_tag="JN001_000980"
     CDS             complement(30913..31365)
                     /gene="phnG"
                     /locus_tag="JN001_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate C-P lyase system protein PhnG"
                     /protein_id="HAY9052289.1"
                     /translation="MHADIATRQHWMSMLAHSQPAELAARLNALNITANYEVIRTAET
                     GLVQIQPRMGGTGERFFAGDATLTRAAVRLTDGPLGYSWVLGRDKQHAERCALIDALM
                     QQSRHFQNLSETLIAPLDADRMARIAARQAEVNASWVDFFTMVRGDNA"
     gene            complement(31366..32091)
                     /gene="phnF"
                     /locus_tag="JN001_000981"
     CDS             complement(31366..32091)
                     /gene="phnF"
                     /locus_tag="JN001_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate metabolism transcriptional regulator
                     PhnF"
                     /protein_id="HAY9052290.1"
                     /translation="MHLSTHPTSYPTRYQEIAAKLEQELRQHYRCGDYLPAEQQLAAR
                     FEVNRHTLRRAIDQLVEKGWVQRRQGVGVLVLMRPFDYPLNAQARFSQNLLDQGSHPT
                     SEKLLSVLRPASGHVADALGITEGENVIHLRTLRRVNGIALCLIDHYFADLTLWPTLQ
                     RFDSGSLHDFLREQTGIALRRSQTRISARRAQAKECQRLEIPNMSPLLCVRTLNHRDG
                     ESSPAEYSVSLTRADMIEFTMEH"
     gene            complement(32112..32891)
                     /gene="phnE"
                     /locus_tag="JN001_000982"
     CDS             complement(32112..32891)
                     /gene="phnE"
                     /locus_tag="JN001_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313113.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter, permease protein
                     PhnE"
                     /protein_id="HAY9052291.1"
                     /translation="MQTITIAPPKRSWFSLLSWAVVLAVLVVSWQGAEMAPLTLIKDG
                     GNMATFVADFFPPDFSQWQDYLTEMAVTLQIAVWGTALAVVLSIPFGLMSAENLVPWW
                     VYQPVRRLMDACRAINEMVFAMLFVVAVGLGPFAGVLALFIHTTGVLSKLLSEAVEAI
                     EPGPVEGIRATGANKLEEILYGVLPQVMPLLISYSLYRFESNVRSATVVGMVGAGGIG
                     VTLWEAIRGFQFQQTCALMVLIIVTVSLLDFLSQRLRKHFI"
     gene            complement(33017..34033)
                     /gene="phnD"
                     /locus_tag="JN001_000983"
     CDS             complement(33017..34033)
                     /gene="phnD"
                     /locus_tag="JN001_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9052292.1"
                     /translation="MNAKIIASLAFTSMFSLSTLLSPAHAEEQEKALNFGIISTESQQ
                     NLKPQWTPFLQDMEKKLGVKVNAFFAPDYAGIIQGMRFNKVDIAWYGNLSAMEAVDRA
                     NGQVFAQTVAADGSPGYWSVLIVNKDSPINNLNDLLAKRKDLTFGNGDPNSTSGFLVP
                     GYYVFAKNNISASDFKRTVNAGHETNALAVANKQVDVATNNTENLDKLKTSAPEKLKE
                     LKVIWKSPLIPGDPIVWRKNLSETTKDKIYDFFMNYGKTPEEKAVLERLGWAPFRASS
                     DLQLVPIRQLALFKEMQGVKSNKGLNEQDKLAKTTEIQAQLDDLDRLNNALSAMSSVS
                     KAVQ"
     gene            complement(34058..34846)
                     /gene="phnC"
                     /locus_tag="JN001_000984"
     CDS             complement(34058..34846)
                     /gene="phnC"
                     /locus_tag="JN001_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphonate ABC transporter ATP-binding protein"
                     /protein_id="HAY9052293.1"
                     /translation="MQTIIRVEKLAKTFNQHQALHAVDLNIHHSEMVALLGPSGSGKS
                     TLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRAHTGYIFQQFNLVNRLS
                     VLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRVSTLSGGQQQR
                     VAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALR
                     YCERIVALRQGHVFYDGSSQQFDNERFDHLYRSINRIEENAKAA"
     gene            complement(34979..35422)
                     /gene="yjdN"
                     /locus_tag="JN001_000985"
     CDS             complement(34979..35422)
                     /gene="yjdN"
                     /locus_tag="JN001_000985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family metalloprotein YjdN"
                     /protein_id="HAY9052294.1"
                     /translation="MPLSPYLSFAGNCSDAIAYYQRTLGAELLYKISFGEMPKSAQDS
                     AENCPSGMQFPDTAIAHANVRIAGSDIMMSDAIPSGKASYSGFTLVLDSQQVEEGKRW
                     FDNLAANGKIEMAWQETFWAHGFGKVTDKFGVPWMINVVKQQPTQ"
     gene            complement(35582..35917)
                     /locus_tag="JN001_000986"
     CDS             complement(35582..35917)
                     /locus_tag="JN001_000986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004856597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phnA family protein"
                     /protein_id="HAY9052295.1"
                     /translation="MSLPHCPKCNSEYTYEDNGMYICPECAYEWNDTEPAQESDELIV
                     KDANGNLLADGDSVTIIKDLKVKGSSSMLKIGTKVKNIRLVEGDHNIDCKIDGFGPMK
                     LKSEFVKKN"
BASE COUNT         7835 a         9715 c        10228 g         8445 t
ORIGIN      
        1 ctggagagga agagtattcc ccggtcaggc gaccggggaa ggggagagat taatgtgcgc
       61 ggccttgctc aacgccaaag ccggtctggg agcggataaa ctgcgcacgg aacagttcac
      121 gctcgcgcgc accttccgct gagttatcgg ttgccgagaa gaaccagatg ccgaggaatg
      181 ccacgctgat agagaacagc gccgggtatt catacgggaa gatggctttt tcgtgaccga
      241 ggatctgtac ccaaatagtc gggccgagga tcatcagcac cactgcggta atcaacccca
      301 gccagccgcc cagcatcgtg ccacgggtag tcagtttcga ccagtacatg gaaagcagaa
      361 tgatcgggaa gttacagctc gccgcgatgg caaacgcaag gcctaccata aaggcgatgt
      421 tctgattctc aaacagcatg ccgaggataa tcgcaatcac acccaaaatc aggacggtga
      481 ttttcgatac ccgcagttct tcacgttcgg tcgcaccttt tttgaagacg ttagcgtaca
      541 agtcatgcga aaccgcggat gcgcccgcca gcgtcagacc cgcaaccacc gcgaggatag
      601 tggcgaaagc aaccgctgaa ataaaaccga ggaacaggtt gccgcccact gcattcgcca
      661 ggtgaacggc cgccatgttg ttaccaccaa tcagatggcc cgccgcgtct ttatattccg
      721 gattcgcacc aaccagcatg atcgcgccga agccgataat aaaggtcaga atatagaagt
      781 agcccataaa cccggtggcg tagaacacgc tcttacgtgc ttcgcgggca tcgctgactg
      841 taaagaagcg catcagaatg tgcggcaagc ccgccgtacc aaacatcagt cccagaccca
      901 gagagagcgc ggagatcgga tctttcacca gcccgcccgg cttcatgatg tcgacacctt
      961 tcgggtgtac cgccatcgct tcgctgaaca gattattgaa gctaaagccg acgtgtttca
     1021 tcaccataaa ggccataaag ctggcaccga acagcaacag cacggcttta ataatttgca
     1081 cccaggtggt cgccagcatg ccgccgaaca ggacgtacat catcatcagc acgccgacca
     1141 gcaccaccgc aatgtgatag ttaaggccaa acagcagctc gatcagttta cctgcgccta
     1201 ccatctgggc gataaggtaa agcgccacca ccaccagaga accacaggcc gaaagaatac
     1261 gaatcggccc ttgtttcagg cggtaagagg ctacatcggc aaaggtgtag cgtcccaggt
     1321 tacgcagacg ttcggcaatc aggaacaaaa tgatcggcca gcccaccagg aagcccagcg
     1381 agtaaattaa gccgtcatag ccggaggtaa acaccagcgc ggagatcccc aaaaatgagg
     1441 cggcggacat atagtcaccg gcaatcgcca gcccgttctg gaagcctgtg atattgccgc
     1501 ctgccgtgta gtagtcgcta cgagaacgta cgcgttttga tgcccagtag gtaatgccga
     1561 gcgtaaacac gacgaaaatc aggaacataa taatcgcctg ccagttcgtt ggctggcgct
     1621 ctacggcccc gctaatagca tccgcggcgt tagctgcgaa agggagtgtg gcggcaagcg
     1681 ccgtcagaac tcttttcatg atgcttgtac ctcatgcagg acttcattat taagacggtc
     1741 gaattcgccg ttcgcccgcc agatgtagat accggtgaga acaaaggaga tcacaatcac
     1801 tccaacacca attggaatac cgcgtgtgac gctggtgttc ggattcagcg gcgtgcccag
     1861 ccagccgggc gcgaaggcga tcagtaaaat aaagccgata taaactgcca gcataataat
     1921 cgacaggatg gtggcaaacc gttgccgttt ttcgactaac tccctgaaat gcgcattgtc
     1981 ttctatccgc tgataaatag tgccattcat cacagattct ccagaggtaa tgtagggatt
     2041 gttttaattc ccgctccctt atgggagaag gttaacgctc gggtaaccct tgccgaatgt
     2101 aggccggata aggcgtttac gccgcatccg gcaattgtgg gttacgatgg catcgcgata
     2161 gcctgcttct cttcaagcag cttctcgact acgccaggat cggcaagcgt cgaggtatcg
     2221 cccaggttgc tggtatcgcc cgccgcaatt ttgcgcagaa tacggcgcat aattttgccg
     2281 gagcgggttt taggcaggga gtcggtccag tgcagcacgt ctggcgtcgc cagcgggcca
     2341 atctctttac gcacccagtt gcggacttct gcgtacagtt ctggtgacgg ttcctccccg
     2401 tgattaagcg tgacgtaggc gtagatcgcc tgacctttaa tattgtgcgg aatacctact
     2461 acggcggctt cggcaatctt cggatgcgcc accagcgccg actcaatctc tgccgtcccc
     2521 agacggtgac cggagacgtt cagcacgtcg tccacacgcc cggtgatcca gtaatagcca
     2581 tcttcatcgc gacgcgcgcc gtcgccgctg aaatacatat ttttgaaggt ggagaagtag
     2641 gtctgttcaa aacgttcgtg atcgccaaac agcgtacgcg cctgacccgg ccaggagtcg
     2701 gtgatcacca ggctgccttc ggtagcgcct tccagcgggt taccttcgtt atcgaccagc
     2761 gccggttgca cgccgaagaa cggacgtgtt gccgaaccgg ctttcagccc ggtagcgcca
     2821 ggcagtggcg tgatcatgaa accgccagtt tcggtctgcc accaggtatc gaccaccgga
     2881 catttctcgt tgccgatttt tttccagtac cactcccacg cttccgggtt aattggctcg
     2941 cccacggaac cgagaatgcg cagcgacgaa cggtcggtac cctcgatcgc tttatcgcct
     3001 tccgccatca gcgcgcggat cgccgtgggt gcggtataga gaatattgac ctgatgcttg
     3061 tccaccacct gcgccatacg ggcaggcgtc ggccagttgg gtacgccttc aaacatcagc
     3121 gtggtcgcac cgcaggccag cgggccgtac agcaagtaac tgtgtccggt cacccagccc
     3181 acatcggcgg tgcaccagta gatatcaccc ggatgataat caaagacata tttaaaggtc
     3241 agcgccgcgt acaccagata accgccggta gtatgcagca caccttttgg cttaccggta
     3301 gaaccggagg tgtagagaat aaacagcgga tcttcggcgt tcatctcttc cgcttggtgc
     3361 tgatcgctcg cttgctcaac caggtcgtgc caccacaggt cgcgcccttc ctgccagtca
     3421 attttcccgc cagtacgctt cagtaccacc acatgctcta cgctggtgac gttcgggttt
     3481 ttcagcgcgt catcaacgtt tttcttcagc ggaatactgc cgcccggcac gcacaccttc
     3541 gtcggaagtg atcaccagtc gtgagttgga atcaataatg cgcccggcaa cggcttccgg
     3601 cgagaagccg ccgaaaatca ccgaatgcac cgcgccaatg cgggcgcagg ccagcatcgc
     3661 aaccgcggct tccggcacca tcggcatata aatcgccacc acatcacctt ttttaatgcc
     3721 cagctcgagc agggtattgg cgaagcggca gacgtcgcgg tgcagctctt tatagctgat
     3781 atgtttgctc tggctggcgt cgtcgccttc ccagatgatg gcggtacgat cgccgttttc
     3841 ttgcagatgg cggtcaaggc agtttgccgc cagattcagc gtgccgtcct cgtaccattt
     3901 aatggacaca ttaccggggg caaaggaggt gtttttcacc ttctggtaag gtttgatcca
     3961 gtcaagaatt tttccctgtt cgccccagaa ggtatcaggt acgttaatag attgttgata
     4021 cattgcctcg tactgctgag ggtttatcag gcaacggtct gcgatgttgg caggaatggt
     4081 gtgtttgtga atttggctca tgcttttgtt ctccttgtag aatgttaata atatgtgaca
     4141 taagcgttaa atgtaggggt attggcagtt ttgtttagta tttgggcgac agatcacgca
     4201 aaagtagaat tgtgcaaata aacggcaggg taatttttga aggtcagcaa caaaagttga
     4261 ttaattcttt gaggaacatg cagttatgca tgctgttgaa aaagaggaag atactgacta
     4321 actctaaagt ggtattttac atgcacttac aattgattaa agacaacatt cacagtgtgg
     4381 ttatttgtta cacatagggg cgagcaatgt catgacagtg taggtgcggt tactgtcgtg
     4441 aaaaacaata aaaaccgcca ttgcaacaat ggcgcaattc ggatgaagcc cctatgacaa
     4501 ggataaaaat aaacgcacgc cgtatcttca gcttattgat tccttttttc tttttcactt
     4561 ctgttcacgc tgaacaaacg gcagctcccg caaaacctgt aactgtggaa gcgaagaatg
     4621 aaacctttgc cccgcagcat cccgatcaat atctctcctg gaaagccacc tcggaacagt
     4681 cagagcgtgt tgacgccctg gcggaagatc cacggctggt gatcctgtgg gcggggtatc
     4741 ccttctcgcg cgattacaac aagccgcgtg gacatgcctt tgctgtgacc gatgtgcgtg
     4801 aaaccctgcg taccggtgcg ccgaaaaatg ctgaagatgg tccgctaccg atggcgtgct
     4861 ggagttgtaa aagcccggat gtggcgcgtc tgatccagaa agacggcgaa gatggctact
     4921 tccacggtaa gtgggcgcgc ggcggcccgg aaatcgtcaa caacttaggt tgtgccgact
     4981 gccataacac cgcctcacca gagttcgcca aaggcaaacc ggagttaacc ctttcccgtc
     5041 cgtatgcggc tcgcgcgatg gaagccattg gtaaaccttt tgagaaagcc ggacgtttcg
     5101 accagcaatc gatggtttgc ggtcagtgcc atgtggagta ttacttcgac ggcaaaaaca
     5161 aagcggttaa attcccgtgg gatgacggca tgaaagtcga aaatatggag cagtattacg
     5221 acaaaattgc cttctctgac tggactaact ccctgtcgaa aacgccaatg ctgaaagcgc
     5281 agcacccgga atatgaaacc tggacagcgg gcattcacgg taaaaacaac gtgacctgta
     5341 tcgactgcca tatgccaaaa gtgcagaacg ccgaaggcaa actctacacc gaccataaaa
     5401 ttggtaatcc gtttgataac ttcgcccaga cttgtgcgaa ctgccatacc caggacaaag
     5461 ctgccttgca aaaagtggtc gcggaacgta agcagtcgat taacgacctg aaaatcaagg
     5521 ttgaagatca actggttcac gctcacttcg aagcgaaagc agcgctggat gcaggcgcga
     5581 cggaagctga aatgaagcca attcaggacg atatccgtca tgcccagtgg cgctgggatc
     5641 tggcgatcgc ttcccacggc attcatatgc acgcaccgga agaaggttta cggatgctcg
     5701 gtacggcgat ggataaagcg gcggatgcac gcaccaaact ggcgcgcctg ctggcgacca
     5761 aaggcatcac ccatgaaatc cagatcccgg atatctcaac caaagagaaa gcccagcagg
     5821 ccattggcct gaacatggaa caaatcaagg ccgagaagca ggacttcatc aaaacggtga
     5881 tcccgcagtg ggaagaacag gcacgtaaaa acggtctgtt aagccaataa ccccgttccg
     5941 cctcgcaagg ggcggaaaac acaatggagt gaatatgagc gtattacgtt cgttattaac
     6001 tgctggggtg ctggcgtcgg gcctgttgtg gagcctgaac ggaattaccg ctacccctgc
     6061 ggcgcaggca tctggtgatc gctacgaagt tacccagcag cgtaacccgg atgccgcctg
     6121 tctggactgt cataaaccag ataccgaagg tatgcatggc aaacatgctt ccgttatcaa
     6181 cccgaataac aaattgccgg tcacctgcac caactgtcac ggccagccat caccgcaaca
     6241 ccgcgaaggg gtgaaagatg tgatgcgctt taacgagccg atgtacaagg tcggagagca
     6301 gaacagcgtc tgtatgtcct gtcatctgcc ggaacagttg caaaaagcgt tctggccgca
     6361 cgatgtccac gtaaccaaag tggcgtgcgc cagctgccat tccctgcatc cacagcaaga
     6421 tacgatgcag acgttaagtg acaaaggacg gattaagatt tgcgtcgatt gccacagcga
     6481 tcagcgcacc aatccgaact ttaacccggc gtctgttccg ttgcttaagg agcagccatg
     6541 acctggtctc gtcgccagtt tctcaccggc gtcggcgtgc tggcagccgt cagcggcacc
     6601 gcagggcgcg tggtggcgaa aacgttgaat atcaatgggg tgcgttacgg catggtgcat
     6661 gacgagtcgt tatgcatcgg ctgtaccgcc tgtatggatg cttgtcgaga agtgaacaag
     6721 gtgccggaag gcgtctcgcg cctgacgatt attcgtagcg agccgcaggg cgaatttcct
     6781 gatgtgaaat atcgcttctt ccgtaagtct tgccagcact gcgatcatgc gccgtgcgtt
     6841 gacgtctgcc cgaccggtgc gtcttttcgt gatgccgcta gcgggattgt cgatgttaat
     6901 cctgatctct gcgtcggttg tcagtactgc atcgccgcct gtccgtaccg cgtgcgcttt
     6961 atccatccgg tcacgaagac ggcggacaaa tgcgatttct gccgtaaaac caatttgcag
     7021 gccggtaagc tgcccgcgtg cgttgaggct tgcccgacga aggcgctgac gtttggcaat
     7081 ctggacgatc ctaacagtga gatttcgcaa ctgctgcgcc agaagcctac ttaccgctac
     7141 aagctggcgc tgggaaccaa accgaagctg taccgcgtac cgtttaaata cggggaggtg
     7201 agccaatgac gcagacttcc gcatttcatt ttgaatcgct ggtgtgggac tggccgattg
     7261 ccatctacct gtttttgatt ggtatttctg ccggtctggt gacgctggcc gtgctgttac
     7321 gtcgcttcta cccgcaggcg ggcggtgcag acagtacgtt gctgcgcacc acgctgattg
     7381 tcgggccggg cgcggtgatc ctcggtctgt tgatcctcgt cttccacctg acaagaccgt
     7441 ggaccttctg gaagctgatg ttccactaca gttttacctc ggtgatgtcg atgggggtga
     7501 tgctgtttca gctttacatg gtggtgctgg tgctgtggct ggcgaaaatc tttgaacatg
     7561 atttgcttgc ccagcaacaa cgctggttgc cgaagctggg gatcgtgcaa aaggttctga
     7621 gcctgctgac gcccgttcat cgcggactgg aaacgctgat gctggtgttg gcggtgctgc
     7681 tgggggctta taccggcttt ctgctgtcgg cgctgaaatc gtatccgttc ctcaataacc
     7741 cgatcctgcc ggtgctgttc ctcttctccg gcatctcgtc cggtgcggcg gtggcgctga
     7801 tcgccatggc gatacgccaa cgcagtaacc cgcattccac ggaagcgcac tttgttcacc
     7861 ggatggaaat ccccgtggta tggggtgaaa tcttcctgct ggtggcgttt tttgtcggtc
     7921 tggcgctggg cgatgacggt aaagttcgtg cgctggtggc ggcattaggt ggcggtttct
     7981 ggacgtggtg gttctggctt ggtgtcgccg ggctggggct gattgtgcca atgttgctca
     8041 aatcgtgggt caatcgcagt tccggcattc ctgccgtgct ggcggcgtgt ggggccagtc
     8101 tggtcggcgt gttgatgctg cgctttttca ttctctacgc cggacagttg acggtggcgt
     8161 aagccagaaa agaggtggtt tctggacgta ttccttcctg aagtcggttt tctggcgttg
     8221 ttgttaagtc tcggggtcaa cgtgttgacc ccgttgacgg cctttgcggg agtgcggttg
     8281 cgctggcctg ccatgatgcg actcacttgc atcggcattc tggcgcagtg cgcgctcctg
     8341 ctgctcgcct ttggcgtact gacgtattgt tttctcatca gcgatttctc ggtcatttat
     8401 gtcgcccaac atagctacag cctgctgtcg tgggaactca aactggcggc ggtgtggggc
     8461 ggtcatgaag gttcgctgct gctttgggtg ctgctgcttt ccgcctggag cgcgctgttt
     8521 gcctggcatt atcggcagca aaccgatccg ctatttccgc tgacgctagc cgttttatct
     8581 ctcatgctcg ccgcactgct actgtttgtg gtgctgtggt ccgatccctt cgtgcggata
     8641 tttccaccag caatcgaagg ccgcgatctc aatccgatgc tgcaacatcc cggtcttatc
     8701 tttcatccac cgctgcttta ccttggctat ggcggtttga tggtagcggc gagcgtggcg
     8761 ctggcgagtc tactgcgcgg cgagtttgat gcggccagcg cccgaatttg ctggcgctgg
     8821 gcgttacctg gctggagtgc attaacggcg gggatcatcc tcggttcctg gtgggcctac
     8881 tgcgaactcg gctggggcgg ctggtggttc tgggatccgg tggaaaatgc ctctttatta
     8941 ccctggcttt ctgccactgc gctgctgcac agtttatccc tgacacgcca gcgggggatt
     9001 tttcgccact ggtcgctgtt actggcgata gttactctga tgctgtcgct gctgggcacc
     9061 ttaattgtcc gttctggcat tctggtttcg gttcatgcgt tcgcgctgga taacgtccgc
     9121 gccgtgccgt tgttcagcct gtttgcactg attagccttg cgtctctggc tctgtatggc
     9181 tggcgagcgc gggacggtgg cccggcggtg cgtttttcgg ggttatcgcg ggaaatgtta
     9241 atcctcgcta cgctgttgct gttttgcgca gtgctactga tcgtgctggt gggaacgctt
     9301 tatccgatga tttacggtct gctgggctgg ggacgcctct ccgttggcgc gccgtatttt
     9361 aaccgcgcga cgttaccgtt tggtctgttg atgctggtgg tgattgtgct ggcgacgttt
     9421 gtctctggca aacgcgtgca gcttccggcg ctggtagctc atgcgggcgt gctgttattt
     9481 gccgctggga tcgtggtttc cagcgtcagc cgtcaggaga tcagcctgaa tttacagccg
     9541 ggtcagcagg tgacgctggc aggatacacc ttccgttttg agcgcctcga tctgcaagcc
     9601 aaaggcaatt acaccagcga aaaagcgata gtggcactgt ttgaccatca gcaacgcatt
     9661 ggtgaactga tgccggagcg gcgtttttac gaagcacgtc gtcagcaaat gatggaaccg
     9721 tcaattcgct ggaacggcat ccatgactgg tatgtggtca tgggtgaaaa aaccggagcg
     9781 gatcgttacg cttttcgctt gtatgtacaa agcggtgtgc gctggatctg ggggggagga
     9841 ttgttgatga ttgcgggcgc attgttaagc ggatggcggg ggaggaagcg cgatgaataa
     9901 aggacttctc acgctactgc tgttatttac ctgttttgcg cgcgctcagg tcgtagacac
     9961 ctggcaattc gccaatccgc aacaacagca acaggcgtta aatattgcca gccagttacg
    10021 ttgtccgcag tgccagaatc aaaacttact ggaatccaac gcgccggtgg cagtcagtat
    10081 gcgccatcag gtttacagca tggtggcgga ggggaagaac gaagtcgaaa tcattggctg
    10141 gatgaccgaa cgctacggag attttgttcg ctataaccca ccgttaacgg gtcagacgct
    10201 ggtgttgtgg gcgctgccag tggtgttgtt actgctgatg gcactgatcc tctggcgagt
    10261 gagggcgaag cgatgaaaga gcccaaaata ccggtgaaaa tgctgacaac actcacgatt
    10321 ttgatggtat ttctctgtgt cggcagttat ctgttaagtc caaaatggca ggcggtacat
    10381 gcggaatatc agcgtcagcg cgatccgcta catcagtttg ccagccagca aaccccggaa
    10441 gcgcagcttc aggcattgca ggataaaatc cgcgctaatc cacaaaacag cgaacaatgg
    10501 gcgttactgg gcgagtacta tctgtggcaa aacgattaca gcaattcgct gctggcgtac
    10561 cgtcaggcgt tgcaactacg tggtgagaac gctgaactgt atgcggcgct ggcgacggtg
    10621 ctttattacc aggccagcca gcatatgacc gcccagactc gcgcaatgat cgacaaagcc
    10681 ctcgcgctgg actctaacga aatcaccgct ctgatgctgc tggcttccga tgcgtttatg
    10741 caggcgaatt acgcgcaagc catcgaacta tggcaaaaag tgatggatct caactcaccc
    10801 cggatcaacc ggacacagct ggtcgagtcg attaatatgg cgaaattgtt gcagcggaga
    10861 tcggattaat catctggtga tgaagattat gttattgagc tgcataaaaa ataatcgaat
    10921 gaacatatgc caaaaataat cactaatcag tattattgca gattaaacaa ataaaaatct
    10981 ttccataaca aatggttatt cattaatcct gacataaact cgcgttatta tgcattaatg
    11041 cagcgaaaag ctctgttgtt aaagggttgc gcaacatacc gcgcaaatga tactgatcat
    11101 aagcgttaaa aaaatctaca aaccaacgca acacaattca tgcctggcag tatgtcacgt
    11161 tctcgcgttt ctgaacgggg aacggcgctc cattgaggaa gttattctga tgaaaaatat
    11221 aaaattcagc ctggcctggc agattctgtt tgctatggtg ctgggcattc tcctgggaag
    11281 ctacctgcac taccatagcg acagccgcga ctggctggtc gtcaatttgc tctctccggc
    11341 gggtgatatc ttcatccatc tgattaaaat gattgttgtg ccgattgtga tctccacgct
    11401 ggtggtgggt atcgcgggtg tgggtgatgc caaacagctc gggcgtattg gcgcgaaaac
    11461 cattatttac ttcgaggtga tcaccaccgt cgccatcatt ttggggatca ctctggcgaa
    11521 cgtcttccag cccggtgccg gggtggatat gtcgcagctg gcgaccgtcg atatctcgaa
    11581 atatcagagc actacggaag cggtacaaag cagttcccac ggcattatgg gcacgatttt
    11641 gtcgctggtg ccgacgaaca ttgtggcgtc gatggcgaaa ggcgaaatgc tgccgatcat
    11701 cttcttctcg gtgctgtttg gtctggggct ttcctccctg cccgcgacgc atcgtgaacc
    11761 gctggtgacc gtgttccgct ccatctctga aaccatgttt aaagtgactc acatggtgat
    11821 gcgttatgca ccggtgggtg tgtttgcgct gattgcggtg acggtggcta actttggttt
    11881 ctcttctctg tggccactgg cgaaactggt gctgctggtg catttcgcca ttctgttctt
    11941 cgcgctggta gtgctgggaa ttgtggcgcg cctgtgcggg ttaagcgtct ggatcctgat
    12001 tcgtattctg aaagatgagc tgattctggc gtactccact gccagctctg aaagcgtact
    12061 gccgcgaatt attgagaaga tggaagccta cggagcaccg gcgtcgatca ccagcttcgt
    12121 ggtgccgacc ggttactctt ttaaccttga tggttcgacg ctgtatcaaa gtattgccgc
    12181 tattttcatc gctcagctgt atggcattga cctgtccatc tggcaggaaa tcattctggt
    12241 gctgacgctg atggtgacct cgaaggggat tgctggcgtg ccgggcgtgt cgtttgtggt
    12301 gttgctggca acgctgggta gcgtaggtat tccgctggaa ggtctggcgt ttattgctgg
    12361 tgttgaccgt atcctcgaca tggcgcgtac tgcgctgaac gtggtgggta atgcgctggc
    12421 ggtgctggtg attgccaagt gggaacacaa atttgaccgc aaaaaggcgc tggcttatga
    12481 gcgtgaagtg ctgggcaaat ttgataaaac tgcggatcaa taattgaaga ttgccggggt
    12541 tatccacccg gcaatgtgtg gatgcctgat gcgacgctgg tgcgtcttat caggcctacg
    12601 ccagacagcg caatagcctg atttagcgtg attttgtagg tcggataagg cgtttacgcc
    12661 gcatccgaca tcaacgcctg atgcgacgct taacgcgtct tatcaggcct accttaaccg
    12721 ttggttaatt tttcaaactc ttcacacccg gtatcaaacc cttccataca gctcaggttc
    12781 aaccagtgca gcgccttttg tttgttcttc tcgataaaac cttcttcacc gtttaagaac
    12841 atcattcccg cccagtactc ggaataaccg gttcgggaaa ttgcagagct gcgtttgaaa
    12901 tactaggttg ccttgtcatc gtcggcctta atacccacgc cgttggcgta aatcaaacca
    12961 agcagcattt gggcatcgac ggcagagtcg ttctccagat cttccgaggc ttttctaaca
    13021 gcgaaatcgc ctttggataa tccggtttac ccgcttgagt atttaccaga atatgcgcca
    13081 gcgttacttc accttcttta ctgcccgctt gcgccgcttt ctctgcaaga acttttgctt
    13141 gtggatagtc cagactgccc ggattggtga ttttgatctg cgccaacagc gcgcaggcat
    13201 cagcatcacc gctgtcggcg gctttctgtg cccaatattc ggctttgctc aaatcgccgg
    13261 agctaaacca gctgtcggca agaaaatatt gtgcgcgtcg gtccccggcc tctgctgcct
    13321 ttaaatactg gctgccaggc tcggagtcgt tggcgtgggc aaagaatgtc aaaaacaaca
    13381 tcaatgcgat aatttttttc attttgataa tacgattggg tagggagtaa ccagtataaa
    13441 gagttcgaat ggataaaaaa acagcctccg aaaggaggct gtagaaagga ctgtattacg
    13501 ccagtgccgc ttcgcgcagg cgagttttca acttgttgta ctcgtcaatc acgtactgct
    13561 cggcggcgcg ctgatcggcg atcggctcga cgcgcacggc gcagtatttg tattccggcg
    13621 ttttcgtaat cgggcttaag ttttcggtaa ccagctcgtt acaggaacca atccaccact
    13681 ggtaggtcat gtaaatcgcc cctttgttcg gacgatcgct gacctgcgca cgggtgataa
    13741 ttttgccttt acgcgagtgc acccaaacca atgcctcatc ttcaataccc agacgtttgg
    13801 cgtcttcggt attgatttgt gcgtagccag gttcatcagc cagcgccgcc agtgccgcac
    13861 agttaccggt catcgaacgg caagagtagt gaccaacttc acgcaccgtt gacagtacca
    13921 tcgggtactc gtcggtgagt ttgtcgattg gcgctaccca gtcgcaggtg aagaactgcg
    13981 ccagaccgtt cggggtatca aacttctctt taaacagata agaagtcccc tgatcggcat
    14041 ctgaagtatc gcggcaaggc cactgaatga agccctgttc gcccattttc tcgtaagtcg
    14101 caccgtagaa atccgggcac agatgacgca actcatccca gatctcctgg gtgttgttgt
    14161 agtgcatcgg ataacccata cgggtggcga tttcactgat gatttgccag tccgttttca
    14221 gatcccattt cggttcaact gctttgaaga aacgctggaa gccacggtca gccgcagtaa
    14281 acacgccttc atgctcgccc cacgacgttg acggcaaaat gacatccgcc gccgacgcgg
    14341 ttttggtcat aaagatgtcc tgaacgatga ccagttccag atcttcaaag gctttacgta
    14401 ctgccgacag ctccgcatca gtttgcagcg gatcttcgcc cataatgtac gcggcacgca
    14461 cttcgccatg cgctgcgcgg tgcggcagct cgctgatgcg atagccggta tgagcaggca
    14521 ggctttccac gccccaggct ttggcgaatt tctcgcggtt agccggatct ttcacgtact
    14581 ggtatcccgg atacgtatcc ggcagcgcgc ccatatcgca ggcaccctgc acgttgttct
    14641 gaccacgaac cgggtttaca cccgcatgcg gcttaccgag gttaccggtc agcatcgcga
    14701 ggctggtcag agaacgcacg gtttccacgc cctggtagaa ctgggttaca cccatgcccc
    14761 acaggatggc ggcgcttttc gcctgggcat acatccgtgc cgcctgacga atctcactgg
    14821 cgctgacgcc ggtgatatct tcaaccgact ccggcgtgta gccttcaacg attttacgat
    14881 actcttcaaa gccttctgta cgggaagcga cgaacgcttt gtcgtacaga ttttcttcaa
    14941 taatgacatg gcccatcgca ttcaacagcg cgatgttcga gccgtttttc agtgcaatgt
    15001 gcatgtcagc aatgcgcgcg gtttcaattt tgcgcggatc gcagacgata attttcgccc
    15061 cgttacgttt agcgttaatt acgtgattcg ccatgattgg gtgggaatcc gccgggttgt
    15121 acccgaaaac gaacactaaa tcggtattat caatttcgtt aatagcattg ctcattgcgc
    15181 cattaccgac cgattggtgc agacctgcaa ccgatgggcc gtgtcagaca cgagcgcagc
    15241 agtcaacgtt attggtacca ataacggcgc gcgcaaattt ttgcattaca tagttggttt
    15301 cgttacccgt accacgcgag gagccggtcg tctggatggc atccggaccg tacttctctt
    15361 tgatggcgct caggcgctcg gcaacgtaat tcagtgcctc atcccaggaa acaggttcga
    15421 gtttgccgcc acgctggcga cggatcatgg gggttttcag gcgcggggtc aggatctggg
    15481 tatcgttaat gaagtcccag ccataataac ccttcagaca cagggtaccc tggttggttt
    15541 tcccctgcgc tgcctccgcc cggacgattt tgccgttatc gacgaccagg ttgattttgc
    15601 aacctgatgc gcaatagggg caaaccgtga cgactttttt catcggtctc gctccagtta
    15661 atcaaatcac gcatacgcgc tctcgactac agtatgcatc ttttatgcca cattttattt
    15721 ggggtcattc cctgatatta cgggcactat ttattcaaaa ctctgacgaa aaacaggctg
    15781 tcgtcagttt tgacgtgacg aaacgaaata ccgcgtgaca gccatcacgc ggcagacatt
    15841 ttattttttc tcgacgacgg gagccgcctg atacccgccg cccagcgatt tcatcaactg
    15901 aatgctgtgg atcacccggc ggctgtccag catcagtaat gacatctctt cggcaagcac
    15961 tggcaaccgg gcttcggtgg cctgtaagcg gctggttaag ccgcgctgat aggcggcctc
    16021 ggcagcgcgc tgggtgaagc gcgttgcttc cacgcgttca gcctgcattt ctcgttcgtc
    16081 gttgagcgtt tgcagacgcg tgccgttgac ggcaacgtca cgcaccgcgt tcagtactga
    16141 ctggttgtaa cgttcaatca tcatgttgct ggcggcgcga gtgccttcga gattggcatt
    16201 caaccgtcca ccgtcaaaca gcggcaattt cagacccggg atgaagttga actggcgact
    16261 ggtttttttg aataaggtat ccaggtggat ggagtccaga ccgaaaaacg ctttgatatc
    16321 aaagctcggg tagaacagtg cccgcgcgga atccacctga tctaatgacg cctgaacata
    16381 ccagcgcatg gcttgcagat ccgggcgtct ggcgagcaac tcataagaga gtgtcgccgg
    16441 aatgccggtc tggactcgtg gtaatgccac cggtttgatc tccggcatat cgctggcccc
    16501 cgcgccaatc aatgcacgca gagattctcg cgtttcggtg atttgccctt tgacggcagc
    16561 aatttgttta tcgaccgcca gaatctgtgc ccgcgcgccg tggaaaggca cttgtgcttc
    16621 cagaccgtgc gccactttac tctggtgcgc tttcaccgcg taatcaatca catcgcgagt
    16681 ttgttctaac agatcgagca tctgatagct ggcctgcata ctgtaataaa gctgcgctac
    16741 gcccgtggtc agcgatagct ctactgctgc ggtttctgcc agcgcggcat tatgcgcgcc
    16801 aatggcggcg gcaaccgctg agcgatgcac accccacaaa tcaagatcca gtccggcaaa
    16861 caaacctact gtggcttccg tatagtacgg cccgtccata cccagtgagg gcgcatccat
    16921 cgcataaggg cttaaaaagc cgttcgccga gacgcgttgg cggttgagca tccctaacgc
    16981 tgcgacctgt aattgtgaac cggcatctaa caaatcggcc tgggactgcg ctttttcttc
    17041 ccgcagtttc gcttcggcga gggtgtgtga accacttagc gtccgttgga tcagcgcatc
    17101 cagctgcggg tcattgagtt gtttccacca ctgcgcctgc ggccagccgg agctggcaag
    17161 atgaatatcg tcggccagtt tgatttgttc cggtttgagc tgttgatgag gtgcagaatc
    17221 cttacgtacc agggcacagc cggaaatcag cgtcgtgctg ccgagaatgc tgcacaacag
    17281 cagacgtgaa agttgacgat tgatcattgc gtggctcctt gtgcctgttc cgtggcgggc
    17341 gttaatgccg gggctgtcca gtctggcaag cgggcgaaaa gctggcagac gtgttgctcc
    17401 tgttttaata aggtgggcag gatggcctgc gaggcgggtg tctcttcaag cgttatttga
    17461 ggagaacagc tgagtgcggt tgccagaccg gcagcgtatt tttccagggc gtcggcaaac
    17521 tgacctgctc tgtccggctg tagtgcgtta tccagcgcct gcgccgagtt ccaggtggca
    17581 tcccaggcgt gaagaagatc gcggccctga cgaataaccg tttgcgaacg ttcaatcagt
    17641 aaggcgcgtt cttcgctgtc cagttgacgc tccagcgcca cgcgttggca catctcttca
    17701 caggcattaa acgccgcatg cagacctata cgaatttgca gataagtgcg cagagccgtg
    17761 acttcctgct ggcgtgggat ccgcattact ttacttagca tacccagcgc accggctagt
    17821 ttttgcggca gagtgcgcgc ttcactttca ggccagacaa aggtgtaaat caccgcggac
    17881 accacggtac caatgatgat acccagggcg cgatcgcgaa tttccaccag gtcgtacact
    17941 gggccaaaaa cgttttcgag cgtggcgagc gcgaaggtga cgaccatctg tgtgccgata
    18001 taagaagagc gttcagagct ggtggcaatc catgcgccca acaggaaaat cggtgccagc
    18061 acaaacagca attcgacaat attgtccagc cagggcatga ccagtagcgt gaataacagc
    18121 gccagaatcg cgccgcaaaa ggccccgcca aaacgcagca ccatcttctg gtacgacgaa
    18181 ccgacatttg gattagcgac gatcacgcag gtcagcatac aggtgtgaat gccttcccag
    18241 tccacgccgc tgtaaaaggt gtaacagatc aaacaggcga gcaatgtttt taccgcgtag
    18301 cgtatatagt ctggattggt aaaagcatcg gcgaccattg atggcggttt ggcggcgggc
    18361 gttggcggcg tattcgggtt catctggccc agttgtaaca acgtctggca gatattctcc
    18421 aggttacatt cccgtgccgc caccgcttca ctttcactga tccgccagtc gctttgccag
    18481 cactgacctt cagcaacggc atgctgcagc ttgttgattt ctgaggctaa tttttgccga
    18541 aattcaataa ttgcctgaga atcagcaaaa gaggtgggat cgtagcgatt cagcgtcgag
    18601 taaatgtagg ttaccgttgc cacgcagctt tgccaccatg cgctttgagt tcgccagttg
    18661 gcatcgtccg cgagacaaaa gacattcagt ttttgcagcg ccagcgcctc tctttcaatc
    18721 cgcgtttcgg gtagcggtgc gaggctgtct gtcaggtgac taatggcatc atcaagccga
    18781 tcattaagcg cctgatgcat ttgcgaaatg gcacgactgg gaaaccacag cacgccgatt
    18841 aacgtcatca gcaaggttgg atagaggcca acaacgatac accacagcgt taagcgcacg
    18901 accacttccg gatagtcgag catggcgggg aaggtttgcc cgtaaatggc gacaatggcg
    18961 acagcgaaaa agaccagtcc cagccgatgg gtgcgcatca aaaacatgca gcccatcagg
    19021 atcggcccgg cgatgatcaa tcggatcaac ggttcgccgt atgaccattt gtagatcaaa
    19081 aacaggctgc cgatctccag caccgtggca accacaaaca agatcgccac aaatttggtg
    19141 taaaacgcgt tcgactgaat accgtaaaac agcactgcca gcgataacgc cacaaaaggg
    19201 atctcaaaag tcatcgagat cagaatcacc agcaggcagc ctacccagag ttgcacgatc
    19261 tgcggcacgc ggccgggtcg ccgctcgctt aactcttcat gaaagaacgc cagcagcctg
    19321 accaccggta atggcaggga gttgagcgcg ctcattattg cggctcaaga ttagcgactg
    19381 ccgaagcgcc gatgcggaac atttccgggt caggtttatc gaccatgatt ttgaccggaa
    19441 aacgctgggc aacgcggacc cagttaatag agcgagaaac tttcggcagg ccgcccagca
    19501 ccaggccgcc gtcattcggt agcacaccgt agccaatcga atccacttta ccctcgaagg
    19561 ttttgccgct gtcactcatc aggcgaatcg ttgcgggtgt acctgagcga atatttttca
    19621 gatcggtttc gcggaagttg gcgatcacgt accagtgacg agtgtcgatt agggtaaaaa
    19681 tagggcgcat ggcagaagca aattgcccga cggaggtttt gagggaaatg acccggccat
    19741 caaacggcgc gcgaacggtc gccatttcca gatgcagttt ggtcagggca atatccgctt
    19801 cgaccgccgc acgctgggca actaatacat ccacgccgct gacggcgctg gcggctgact
    19861 gcgcctgtaa caatacggca ttaagatccg cttctgcggc gcgctgcgcc gttcttgcac
    19921 ggtcaacatc ttccgctgag acaaaacctt ctttcagtaa tggctcggtg cggcgtaatg
    19981 tatctgtggc ctgtttcgcg gcggcacgtg ctttttctac cgtggcatta accgagtcgg
    20041 caccaaactg ttgggcgtca acgctacgct gggtgagcat aatttgctta tccagcgccg
    20101 cgagggaggc ttcagctttc gccagattgg cttcgtacgg gcgcgggtca atgcggaaca
    20161 gcaaatcgcc ctgtttgact gcctggttgt cggtgaccgc cagttctaca atgcggccgc
    20221 tgacttccgg caccacatca atggtatctg ctgacgcgta agcgtcatta gttgatggcg
    20281 cactgtctac gcgccagata acgaaaacaa gggcaaccag cgccaacgca accactaaca
    20341 gagcagggaa tttactgcga ggagcttttt tcggcgtact ttccatgagc gcgtctcaaa
    20401 tagattagaa aaatgccagc cagaacagca tggcgtagac agcaaaaagg gcggtataaa
    20461 taattccgac aaatgccaga ttgatatttg cccgctgaat aattcgcctc gtgattagcg
    20521 tcaaaataag gctggcaatg gcgcagaaaa accagctggg ataataagcg ccgatcaccg
    20581 ggattgccgg agataatgag catcccgaaa ccatgaagac gggaattatc caggctgttt
    20641 ttttgagttg catcgccatg cgagagagaa ctgttggcat attaaataca tcctgtttgc
    20701 tgcgaacaat atctgtagtg aatatcaata tccattgaag gcgtcagtat ggctattttc
    20761 ttgatgaata aaaatagctt tattcagcca ccgcattcat aacttatata ttttatgtgt
    20821 taattgattg tatgtatttt tataataaat gcttttgggg gcttaagcgc ccccaaaagt
    20881 gagtggcatt aatttggggt tacgatattc acccacaaat cgaaattatc cagacaggca
    20941 ataatttctt ccagtttcgc gccattgcca ataattttgg ctttcttcgc ttttaccaga
    21001 tccgccattt tggcttgtcc tgtcagcacg gcgtgcagat cttcacggct gatgtagaaa
    21061 gaggcgtcgg cttgcggttg cagtgtttta cggtagttaa gcacgctatc gttcagcgtc
    21121 aggttgaggt tatcgccgtt gctcatattg aagttcaggc tgatattttt acccgcagct
    21181 ttcgcgctat cgaggcgaac ggacataaag tcgaacagca tttcgaccga catcccgcga
    21241 atggtgtccg gggaaccggt ggtgccgtgg ctgaacttat gcaccccttc gcgcagctct
    21301 ttcgcgccgg tcaggtagaa accgcgccag gtggcggact cggcctgata gcccagctgt
    21361 tcaaagttat tcgcttgcag attcttcgcg acctggtcac ccgggttggc ggcaatcacc
    21421 tgtttcagca gttctgccga ccagcggtaa tcaccttgct tgttcgcttc ttgcgccagg
    21481 ctgatgacac gggcagaacc gcccagcgcc tgcacgtaac gtttacccat ctccacctga
    21541 ccatacggat gcaggttagc cgggttaccg tcgtaatagc caagatagaa gttatacacc
    21601 gcgcgggcgt tgtggctgac agaaccgtaa tagccacggc tggcccagtt attggcaagt
    21661 gcaggcggca gtttaatcat gtcgccgatt tcattcatgg tgtagccctg gttcgccagg
    21721 tgcagggtct ggtcgtgaat gtacttgata gtatcgcgat atttaccaat ataatcattg
    21781 atatgcttat tgccccggac cggccaggtg tgcggcataa acaggacttc cgcgtcgtta
    21841 ccccacatat ccagcgtttc gttcagatac tcggtccact tgctggtgtc gcgggttttc
    21901 gcgccgcgca gagtgtagaa gttgtgcagg gtatgcgtgg cgttctcggc ggtacacagc
    21961 gctttcaggg ccggaatata gaagtgcatt tcggctggtg cttcgctacc tggggtcatc
    22021 aggaagtcaa actccaggcc gtcgataatc atcttctcac cggttttggt gatggttttg
    22081 ttcggtgcga tgatgctcgg gtagcccgat gccagcgtta cgccaagacc attgccgatg
    22141 ttaccctgag ggttatgcgc cagcagcagg ccgtaggagt aaagtgcacg gtggctcata
    22201 atattacccg ccagtacgtt ttcgctgatg gcttcgtcca taaagccagc aggggcgata
    22261 acctgcactt taccggattt cacatcagct tcagagataa tgcctttcac gccgccatag
    22321 tggtcggtat ggctgtgggt ataaataacc gcaacaatcg gtttttgcgg gcgattttgg
    22381 aagtaaaggt caagggcggc ttttgcgctc ggtggcgtca ccagcgggtc gatgacaata
    22441 atcccggtat caccttcgat aaaggtgatg ttggagatat cctgaccgcg aacctggtac
    22501 attctgtcgg tgactttaaa caggccggaa ataccgttta actgcgactg acgccacagg
    22561 ctagggttaa cggtttcggg cgcgggcgca ttgatatcaa atttataatc ttccccgcga
    22621 taatatggtt tgccattagc atcgcgcaga ataccttcat ccagcagcgg agcgataaat
    22681 ccacgctgag cgtcgtcaaa atcctgacga tcgctaaacg gtaatgattt ggcgtaattc
    22741 tgattaacct gttgggtata ttgagtggcg gctttcgctt cctctttcgc gttagcggta
    22801 tttaccatca tgccgctggc ggcagttaac gcaataacaa ttctgctcaa acggaataac
    22861 cgagagttat tcatataaat ctccatttat catttatgtc gtaaatatgt aatccataca
    22921 aaatacgtca tttaaagctg gggttatcat aattgggaat ttgcgacttt aataagtgga
    22981 agtgtgagct gaacgatcca ttttattagg catttgtgct gaagagagaa aattacgcga
    23041 atttattatc tctgtaaata atatgaggtg ttttatatat ttattatata tattgtactt
    23101 cggcaaatac tgagcacaat ttatcaatgc aaccggtgtt tctttttaaa aaacgtaccg
    23161 gagcaatggg cggtcatgtc gctggcaccg caggattctg cgttgctgtg ccagcctttt
    23221 attcatggtc aatgagtgag gtgattgata aagacaccag gtcgtcagag cgcactgatt
    23281 atccgcatta tgccagtgaa gttgcactgg cttttggttc acgagtggtt ggcctcgaac
    23341 tggcaaaaat gattgtggat gcgtggctgg gcgcacagta cgaaggcggt cgtcatcaac
    23401 aacgcgtgga ggcgattacg gcaatagagc agcggagaaa ttgagattca tccactactt
    23461 gcatggatga gtaatgatta atgtggatag agtttctttt tgaggttggc taatgaaacg
    23521 ctttccgcta tttcttttat tcaccctgct cacgctgtcc accgttccgg cccaggccga
    23581 tattatcgac gacaccattg gcaatattca gcaggcgatt aacgacgctt ataaccctga
    23641 ccgtgggcga gactatgaag attcgcgcga cgacggctgg cagcgtgaag tgagcgacga
    23701 tcggcgcaga caatatgacg accgccgccg ccagtttgaa gatcgccgca ggcagctgga
    23761 cgatcgccag cgccagcttg atcaggagcg tcggcagcta gaagatgaag agcggagaat
    23821 ggaagatgag tatgggcgat gaggttgggt atggagcagg catcgcccct caccccaatg
    23881 gggagaggga gaaaaccagc gcaatattca atatcgagca caatcggtcc cctcgcccct
    23941 ctggggagag ggttagggtg agggggccag cgcgcacatt ccctctcatc acgccacccc
    24001 aatctccatc ccatcaaatc ccgcctcaaa ccccgacggc agtgcgtttt ccatcagcca
    24061 cgcatcaaac tggtggctga tatgggtcag aatcacccgt ggcgagcgga taacctgatt
    24121 cagcgccagc acggtgttta aatcacagtg actacgtggc gcatcctcgc gcggcgggtg
    24181 gctgcaatca atcaccatta cctgcggctg attattgcgt aaaaatttca gcgttttttc
    24241 cggcaagcct gcggtgtcag acagccacgc cacccggctg tgtgccgttt ccagcagata
    24301 accgaaggtc agttttgagt ggttgagcgg caggggcgtg acctgtaacc cctgcaaatc
    24361 aaacaccaca aacggttcca ccgtgtggct gaaatcaagc aggcccggat gtttaaacag
    24421 atcgtcgcag ccctgttcat ccggcgggcc gtaaaccggg atcggatcgc ccacgcccca
    24481 gcgcagcggg aatagcccct gcacgtgatc catatggtag tgcgtcagca aaaactgctg
    24541 gaacgatccg ggcggccagc gatcggcgag atcgtgcagc ccggcgtcga tcagggtgat
    24601 tgcgtcgtta aacttcacta cgccgctgca tggctggcgg cgatactgcg gtgagcgccg
    24661 cgctctggcg caggctacgc actcgcagcc ccatgccgga acgccctgtg cgccgccggt
    24721 gccggtgagc gtgagggtca ggctcatgtt acagcgcctt ggtgaagcgg aagtggctct
    24781 gctcgtagcc ttcacgcagg taaaaacggt gcgcgtcgtg gcgcttcacg ttggtggaaa
    24841 gttcggtcat ttcggccccg gcctggcggg cttcttcttc tgcccacgcc agtaacttac
    24901 tgccgacgtt cagaccgcac gcctgcggca tcaccaccag ttcctgaatt tcgccgatcc
    24961 agttgacatg atgcagatga aactgcaaat gcaggccgat catgccgaca acttcgccat
    25021 ccagcagcgc cagatggtag cgcatgctcg ggtagcgcat gctcgggtag cgcatgctcg
    25081 ggtcgcgcag gttggcgtta aagcccacgc gaaacgcgtg gtggtcaaac tccgcctgtt
    25141 ttagctcaca aatcagcgcg taaaccgcgt cggtatcgta ctgcgtggcc gggcgaagct
    25201 cacaagcagg catggtgttt ctccttctga tgaatcagcg tcagcagtgt gtcgaccgac
    25261 tggcgcaggc tgccgtcatt gttgagcgta tggcaatcct gtggagtata gcgggcggcg
    25321 cgcgccagcc gggcgttaat ttcactggtg ttttcacggc cacggttttt caggcgctgg
    25381 cgcaggatct ccggcgaaac ctgtaaacag acgggcagca gcgccgattg atagcgcgcc
    25441 cgtgcctgcg gcaaatgcgc gcgtgaaccg ttgacgacta cgtcgaatcc agcgtgcagc
    25501 cagaggtcaa tctcgatgcc gacgccataa tacagaccgt tagcgtgcca gcttaaggcc
    25561 agcaggtttt gccccgcgcg ggtaaaaaac tcccgctcac tcagggcgat atggttttca
    25621 cttccggcgc tggcgtcgcg cgtgatgtag cgatgcgcca ccagtaactg cgtttgttcc
    25681 cgcaggcgga gttccgccag caggctgtct ttcccggagc cggacggccc cattaaccaa
    25741 atcagttttc ccatcatcag aacacccttt taccctgacg ccagacgtgg tcgatatgaa
    25801 tgtgattgcc ctggcgatgc gccagcacca ggtcagcgcg tttaccctcg ccaatcaccc
    25861 cgcgatcctg aagattcagc gcctgcgccg gatttttggt caccagcctc accgcctgcg
    25921 gtagcgtaaa gcggttgctc tcgtcatcgg cgacgcggaa cgccgcatcc agcaggctgg
    25981 cggggtagta gtcggaagag aggatatcca gcagaccaag ctgcgccagt tcactggccg
    26041 ccacattgcc ggagtgcgag ccgccacgca cgatatttgg cgcacccatc agcacgttca
    26101 tgccatgctt acgcgaggct tccgccgctt cgaacgtggt ggtaaattcg gcgatcacgc
    26161 tgccaagttg gtgggattcg gcaacgtggg cgtgcgtggc gtcatcgtgg ctggcgagcg
    26221 caatttgtcg cgcgcggcac agggcggcga tggattcgcg attcggctgc gaccagcgtg
    26281 cggcgagcgc caattgctct tcttcgtact gctgcatctg cgcatcggtg agggagtatt
    26341 tgccctgata atattcgcga tacttctcgc ggttagcgaa ctggcgctgg cccggtgagt
    26401 ggtccattag cgacaccagc gtcaccggtt cgcgctgaac cagtttttca aacagcggca
    26461 gtgtggtgtg atgcggcagc tcgcagcgca ggtgcagacg gtgctcggcg cggttgacgc
    26521 cgcgtttctg cgtctcttcg atggtgttga tcatcttctc cagattctcc agctgatcgc
    26581 cgccgtcgcg cacgtcgcca atcgccaccg cgttcagcac ggtggtgatg ccgcttgcca
    26641 ccatcagcgc gtcgtggctg ctcatcgccg aatgggcggg ccagtcgact ttcgggcgcg
    26701 gggtgaagaa tttatcgagg ttgtcggtat gcagctcaat caggccgggt agtagccagc
    26761 caccttcgcc gtccatcgct tctggcaggc ggctctggct ttcggcaaag gcgcggattt
    26821 cgccatcctg cacctccagc gaaccgtgca ccacctcgtt ttccagcacc agcttaacgt
    26881 tattgataat catgaagagg ctcccattgg gtgcaggcgg tcggcgacgt cattacgtac
    26941 agcttcgtca tggaagatgc cgacgatggc tgcgccacgg gctttggctt cgtgaatcag
    27001 ttccaccacc gcggcgctgt ttttggcgtc cagcgaggcg gtaggttcgt cgagcagcag
    27061 aatggggtag tcgacgataa agccgcgggc gatgttgacg cgctgctgtt cgccgccgga
    27121 gaaggtcgat ggtgccaggt gccacaggcg ttccggcacg ttcaggcggg tgagaagacg
    27181 cgcggcttta gcggcgcagg cttcacgcgg aacgccggta tcgagcagcg gctgcatcac
    27241 cacttccagt gctgagatac gcgggatgac gcgcagaaac tggctcaccc agccgactgt
    27301 ggttttgcgg atttccacca ctttgcgcgc tggcgcggtg accaggtcta cccactcgtc
    27361 accgtgtttg atctggattt gaccttcgtc gggtagatag ttggcgtaca gcgagcgcag
    27421 cagggttgat ttgccgctgc cggagtgacc gtggagcacc acgcattcgc ctgcgttgac
    27481 ggtgagcgag gcacgttgta agacgggcag gcgtacgccg ttttgctgat gcaggatgaa
    27541 ggttttactg acgttttgta cgttaatcat ttttcgcctc gtggttcggg tgtcggatgc
    27601 gacgctgacg cgtcttatcc gacctacggg gagcgcattt gtaggccgga taaggcgttt
    27661 acgccgcatc cggcaccggc tcaattctgc aaaaccgatg acaccagcag ttgtgtatac
    27721 ggatggtgcg ggtcgtcgag cacgcggtcg gttaacccac tctccaccac ttgcccctgc
    27781 ttcatcacca gcaaacggtc cgccagcagg cgggcgacgc ctaaatcgtg ggtgacaatc
    27841 actaccgcga ggttcagctc caccaccagg ccgcgcagca ggtcgagcag gcgtgcctgt
    27901 accgacacat ccagtccgcc ggtcggctcg tccataaaca ccagcttcgg atgcgtcacc
    27961 aggttgcggg cgatctgcaa acgttgctgc atgccgccgg aaaaggtggt cggcaggtcg
    28021 tcgatccggt tggcgggaat ttccacctct tccagccact tctgcgcggt ggcacgaata
    28081 tcgccgtaat gacgtgcccc ggtcgccatc agccgctcgc cgatattgcc gcctgccgac
    28141 acctggcggc gcaggccgtc gagcggatgc tgatgcacta cgccccattc ggtgcgcagc
    28201 aggcgacggc ggtcggcctc gctcattgcg tacagcgaac ggctctcata gtgaatctcc
    28261 ccctgctgcg gcgtcaggcg cgcggagatt gatttcagca gcgtggtctt tccggagccg
    28321 gactccccga caatgcccag cacttccccc ggccataaat caaaagagac atcgctaaag
    28381 cctttgcccg gcgcgtaaag gtgggtcagg ttattgaccg aaagtaacgg ttgattcatt
    28441 ggttttttgc ctcgctctgt tggcggcaat aatcggtatc ggagcagaca aacatgcggt
    28501 ttccggcgtc atccagcacc acttcatcaa gatagctgtg ggtcgatccg cagatggcgc
    28561 atggctcatc ccactgctga acggtgaacg ggtgatcgtc gaaatcgaga ctttccacgc
    28621 gggtaaacgg cggcaccgca tagatgcgct tctcgcgccc cgcgccgaac agttgcaggg
    28681 cgggcatcat gtccattttt gggttatcga atttcgggat cggcgacggg tccatcacgt
    28741 agcgcccgtt caccttcacc ggataggcgt aggtagtggc gatatgaccg aagcgggcga
    28801 tatcttcata cagtttcacc tgcatcacgc cgtactcttc cagcgcgtgc atggtgcggg
    28861 tttccgtttc gcgcggctcg ataaagcgca gcggttcggg gatcggcacc tggaagataa
    28921 tgatctgatc ttcggtcagc ggcgtttcgg ggatgcgatg gcgcgtctgg ataagcgtcg
    28981 catcgtccgt acgttcagtg gtgtttaccc cggtcacgcg cttaaagaag ttgcgaatcg
    29041 acacggcgtt ggtggtgtcg tctgcgccct ggtcaatcac cttcagcacg tcgctttcgc
    29101 caatcacgct ggcggtgagc tgaatgccgc cggttcccca gccgtagggc atcggcatct
    29161 cgcgcccgcc aaacggcacc tgataaccgg ggatcgccac cgcttttaag atggcgcggc
    29221 ggatcatgcg tttggtctgc tcgtcgaggt aggcaaagtt gtagccgctc agattagcca
    29281 tggttctgct cctgttgcag acgtttgagt agctccagtt cggcctggaa atcgacgtag
    29341 tgggggagtt tgaggtgcga gacaaagcct gcggcttcga cgttgtcggc atgtgccagc
    29401 acgaactctt catcctgcgc cgggcctgtc gcgtgctcgc cgtactccgg agcctgcaac
    29461 gcacggtcaa ccagcgccat cgctttgcgc tcgctcatgc cgaacaccag cccgtagccg
    29521 cgcgtgaagt gcggcggctc atccggcggg tcaataaaac cgttgaccat ttcacactcg
    29581 gtcatcagca gttcgccgac gttcaccgca aatcccagct cttccggcat aatcgacacg
    29641 tcgatgtaac cactgcggat ttcgcccgcg aacgggtgat tgcgtccgta accgcgctgg
    29701 gtagagtagg ccagcgccag caaatagcct tcgtcgccgc gcatcaactg ctgcaaacgg
    29761 gaagaacgtg aacaggggta aactggcgga gtgcgggtga tgtcatccgg ctgtgcgccg
    29821 ctatcctctt caaacttcgc cagcccctga cgcgccagca ggctgaaaac gtgcggcgac
    29881 ggggattgtt cgctgtctgc ggtggtcagc gtcggcgctt cgccgtttgc cagcagggtg
    29941 aaatcgagca ggcgatgggt gtagtcgtag gttgggccaa gcaactgacc gccgggaata
    30001 tctttataaa ccgctgaaat acgccgttcg agacgcatct ccgtggtgtc gagcggctcg
    30061 cttaccgcca gcttcgccag cgtggtgcgg taggcgcgta gcaggaaaat cgcttcgacg
    30121 ttatcgccgc tggcctgttt cagcgccagc gccgccagtt cgcggtcggc aatgccgcct
    30181 tcggtcatca cgcgatctac tgcaagatta agctgctgtt caatctgggc gacgctcagt
    30241 tcaggcaaat cggtattgcc ccggcgtcgg ctctcttgca gggcgtgggc ggcgtcgatc
    30301 tccttctcgc cccctttcac ggcaacgtac atcagcacac ctccacatga gtggttcgcg
    30361 ggatagccag cagccgctcg ccgcaggtca ggatcaggtc gatgccgagc gggaacgggt
    30421 gcgggcgctc ggtgagttcg tgcagaatgc actccggcag ctgcggagcg atcattcgtt
    30481 cttcggcaat acccgcgcca gtaaggcgca gcatgcgccc gccgctcagg ctgacgacct
    30541 gtaaaatcag cgtcgcgccc gcttccggcg caacagcggt gccgctggaa agagcgttga
    30601 gctgttcgct ggaaatcgcc tcatccgtta ccgcgaaggt cgccagttcc gactgattga
    30661 ccagcggcgc gttggtatga aaacgcaggc tctggctgac gatatcgtta cttaatggcg
    30721 cggaaagcca caccggcgtg tcgttatcag ccagcgtcag cagcacgctg gtggtggcga
    30781 tattcagcgg ctgccagccg cgtttgagct gatgcagggc gacaatcacg cccggctcgc
    30841 tcatggcctt taacaggcga cgaaaactgt gctgggcatc ctgcacagga agcataaaag
    30901 cggtttccag ggtcatgcgt tgtctccgcg aaccatcgta aagaagtcga cccagctggc
    30961 gttcacttcg gcctggcgtg cggcaatgcg tgccatacgg tcagcgtcca gtggggcaat
    31021 aagggtttct gataagtttt gaaaatggcg agattgctgc atcaacgcgt caatcagcgc
    31081 gcagcgttcg gcgtgctgtt tgtcgcgccc cagcacccag ctgtagccga gggggccgtc
    31141 agtcaggcgt acggcggcgc gggtcagcgt ggcgtcgccg gcaaaaaagc gttcgccggt
    31201 accgcccatt cgcggctgaa tctgtaccag gccggtttcg gcggtgcgga tcacttcata
    31261 gttggcggtg atgttcagcg cgttcaggcg ggctgccagt tcagccggtt ggctgtgcgc
    31321 cagcatggac atccagtgct ggcgggtcgc gatatctgcg tgcattcagt gctccatagt
    31381 gaattcaatc atgtcggcgc gcgtcaggct gacggagtac tccgccgggc tgctttcacc
    31441 gtcacggtgg ttaagggtgc gcacgcacag cagcggcgac atattcggga tttcaagacg
    31501 ctggcactct ttggcctggg cgcggcgggc gctgatccgc gtctggctgc ggcgcagcgc
    31561 aatcccggtt tgctcgcgca gaaaatcgtg cagcgagccg ctgtcgaagc gttgcagcgt
    31621 cggccaaagg gtgaggtccg caaagtagtg gtcgattaaa cagagcgcga tgccgttgac
    31681 ccggcgcagg gtgcgcaggt ggatgacgtt ctccccctcg gttatcccca gcgcgtcagc
    31741 gacgtgacca gatgccgggc gcagcaccga cagcagtttt tcgctggtgg gatggctgcc
    31801 ctgatccagc aggttctggc taaaacgcgc ctgggcgttg agcgggtaat cgaacgggcg
    31861 catcagcacc agcacgccga cgccctgacg gcgctgtacc cagccttttt ccaccagttg
    31921 gtcgatggcg cggcgcaggg tgtggcgatt tacctcaaag cgcgccgcca gctgctgctc
    31981 ggcgggaaga tagtcgccgc agcgatagtg ttgacgaagc tcctgctcaa gttttgcggc
    32041 tatctcctga tagcgtgttg ggtagctggt cggatgtgta gacaagtgca tagatatcaa
    32101 tgcctcgctt atcagataaa gtgcttacgc aaccgttgag agaggaaatc cagcaggctg
    32161 accgtgacga tgataagcac catcagggcg caggtttgtt ggaactgaaa accgcgaatc
    32221 gcttcccaca gggtgacgcc gatcccgcct gcaccgacca tgccgacgac ggtcgccgag
    32281 cggacgttgg attcgaagcg atagagggag taggagatca gcagcggcat tacctgtggc
    32341 agcacgccgt aaaggatctc ttccagcttg ttggcgccgg tggcgcgaat gccttctacc
    32401 gggccgggtt cgatcgcttc caccgcttcg gaaagcagct tggagagcac gccggtggtg
    32461 tggataaata gcgccagcac gccagcgaac gggccgagac cgacggcgac cacgaacagc
    32521 atggcgaaga ccatttcgtt aatggcgcgg caggcatcca tcaggcggcg aacgggctgg
    32581 taaacccacc acggcaccag gttttcggcg ctcatcagac cgaaggggat ggagagaacc
    32641 actgccagcg cggtgcccca gacggcgatt tgcagcgtga cggccatttc ggtgaggtaa
    32701 tcctgccact ggctgaaatc gggcgggaag aagtcggcaa cgaaggttgc catgttgccg
    32761 ccgtctttaa tcagcgtaag cggggccatt tccgcgccct gccacgagac gaccagcacg
    32821 gcgagaacaa cggcccagct cagaagcgag aaccagctac gcttgggtgg ggcgatggtg
    32881 atggtttgca tgtttggctc cgtttaatgt tttctccctc tccctgtggg agagggccgg
    32941 gatgagggca tcagcgtgcg catttccccc tcaccctaac cctctccctc aagggagagg
    33001 ggaccgatcg agcacattac tgcaccgctt tactcaccga actcatcgcg cttaacgcgt
    33061 tgttcaggcg gtccaagtca tccagctgcg cctgaatctc ggtggttttc gccagcttgt
    33121 cctgctcatt cagtccttta ttgcttttta cgccctgcat ctctttaaac agtgcgagct
    33181 ggcgaatcgg caccagttgc aggtcgctgg aggcgcggaa cggggcccag cccaggcgtt
    33241 ccagcaccgc tttctcttcc ggcgtttttc cgtagttcat aaagaagtcg tagatcttgt
    33301 ctttggtggt ttcggagaga ttcttgcgcc agacgatcgg atcgcctggg atcagcggcg
    33361 acttccagat caccttcagt tctttcagct tctctggcgc ggaggttttc agcttgtcga
    33421 ggttttcggt gttgttggtg gcaacatcca cctgcttgtt ggcgacggcc agcgcgttgg
    33481 tttcatgccc agcgttgacg gtgcgcttaa agtcgctggc ggagatattg tttttggcaa
    33541 agacgtagta accggggacg aggaagccag aggtggagtt aggatcgcca ttgccgaagg
    33601 tgagatcttt ccgcttcgcc agcagatcgt tcaggttgtt gatcggacta tctttgttga
    33661 cgatcaacac gctccagtaa cctggcgatc catccgccgc gaccgtctgg gcgaagacct
    33721 ggccgttggc gcgatccacc gcttccattg ccgacaggtt gccgtaccag gcgatatcca
    33781 ctttattgaa gcgcattccc tggataatgc ctgcgtagtc tggggcaaag aaggcgttca
    33841 ccttcacgcc cagcttcttc tccatatcct gtaagaatgg cgtccattgc ggtttcaggt
    33901 tttgctgtga ttccgttgaa ataatgccga aattcagcgc cttttcctgc tcttcggcgt
    33961 gtgccgggct taacagggtg ctgaggctga acatgctggt gaaggccagc gaggcaatta
    34021 tcttagcgtt cattcgtttt cctcaatgat ggggatgtca ggcagctttc gcgttctctt
    34081 cgatgcgatt aatgctgcgg tagagatggt caaaacgttc gttatcaaac tgttggctgc
    34141 tgccgtcgta gaaaacgtgc ccctggcgca gggcgacgat gcgttcgcag tagcgcaggg
    34201 cgtaatccac ctgatgcagc gtgacgacta cggtgatgcc gtcgttctga ttgatgtcgc
    34261 gcagggtgtc catcacgatg cgggcggatt ccgggtccag cgaggcgatg ggttcatcgg
    34321 ccagaatcac cttcgcctgc tgcatcagcg cgcgggcaat cgccacacgc tgctgctgtc
    34381 cgccggagag ggtggaaacg cgttgatggg caaaatgcac catgccaacg cgggtcagcg
    34441 cctgtaacgc gcgttgtttc tgctcgcggg tgaaccagct aaaacaggtg cgccagaacg
    34501 gcgtgctgcc gagcgcgcca atcagcacgt tctccagtac gctcaggcga ttcaccaggt
    34561 tgaattgttg gaagatgtag ccggtatggg cgcggctttt gcggatatcg cgcgccagac
    34621 ggccttcgcg ctggactgtg cggcccagca gctcgatatg gctgccggcg gatttatcgc
    34681 cggtaatcaa accgcttaag tgacgtaaaa gtgtggattt gccggaaccc gacggcccaa
    34741 gcagagccac catttcactg tgatgaatgt tcagatcaac cgcatgcagc gcttgatgct
    34801 gattgaaggt tttggcgagc ttctcgacac ggataatcgt ttgcatgatg cagcctccct
    34861 aaaaaagtgg ctccatcgtg gcggattatt gtgacgattt ggttaattaa aagtgactaa
    34921 cagatgaaga gttaacggga attcgatgac agtgcgggag ggcgggcctc ccggcgggtt
    34981 attgcgttgg ttgttgtttg acgacattaa tcatccacgg tacgccaaat ttatcggtga
    35041 ctttgccgaa gccatgcgcc cagaaagttt cctgccaggc catttcaatt tttccgttag
    35101 cggcaaggtt atcaaaccag cgttttcctt cttcgacctg ttgcgaatcg agcaccagcg
    35161 taaagccgga gtagctggct tttcctgacg gtatagcatc gctcatcatg atgtcgcttc
    35221 cggcaatgcg cacgttggcg tgggcgatgg cggtatcggg aaattgcatt ccggaagggc
    35281 agttctcggc gctgtcctgc gctgattttg gcatttcgcc gaagctgatt ttatagagca
    35341 gttccgcgcc caacgtacgt tgataatagg caatcgcgtc ggaacagtta ccggcaaaag
    35401 agaggtaggg acttaacggc atgatggtga cctcagttaa gagaagccag ttaagtgtag
    35461 ttcgaaattt atacagatga gagggaagcc tgataaggcg cggtcagcgt cgcatcaggc
    35521 agtcggcatc gttgccggat gtggcgcgag cgccttatcc ggcttaccga tcacaataca
    35581 atcagttctt tttcacaaac tcagatttca gtttcatcgg accaaaaccg tcgattttgc
    35641 aatcgatgtt atggtcgcct tcaaccaagc ggatgttttt cactttggtg ccaattttca
    35701 gcatcgaaga gctacctttc accttcagat ctttaatgat ggtaacgctg tcgccgtcag
    35761 ccagcagatt gccgttagca tctttaacga tcagctcgtc gctttcctgt gcaggttctg
    35821 tgtcgttcca ttcgtaggca cattccgggc agatgtacat gccgttatct tcgtaagtgt
    35881 attcggagtt gcattttggg cagtgtggta atgacatgtg gatttcctca aaagtcagca
    35941 gggcaaaagc gccaaaaaac ggcagattgc cgaaaaaggc cgcaattata cacaaaatcc
    36001 ctgagtttgt cgggggtact gctgatttta gacgacgatc gttttcattt gaaaggaaac
    36061 gcaaaaagaa aataatcttt ttgcctctat ttattattta agataatgtt aatgctctac
    36121 ctgttctttt tttattcaca tgatattttt atctttctga cgttttaaac gcatcagaag
    36181 acgttattta ttctgataaa aaacaacaca ctaaatataa aat
//
LOCUS       DADMJE010000022        35088 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.022, whole genome shotgun sequence.
ACCESSION   DADMJE010000022 DADMJE010000000
VERSION     DADMJE010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35088
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.022"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..4112)
                     /locus_tag="JN001_000987"
     CDS             complement(<1..4112)
                     /locus_tag="JN001_000987"
                     /EC_number="3.6.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase"
                     /protein_id="HAY9052296.1"
                     /translation="MADNPDPSSLLPDVFSPATRDWFLRAFKQPTAVQSQTWHVAARS
                     EHALVIAPTGSGKTLAAFLYALDRLFREGGEDTREAHKRKTSRILYISPIKALGTDVQ
                     RNLQLPLKGIADERRRRGETVIIDEVHAVAGSKRGAHLALSLERLDALLHTSAQRIGL
                     SATVRSASDVAAFLGGDRPVTVVNPPAMRHPQIRIVVPVANMDDVSSVASSTGEDSHA
                     GREGSIWPYIETGILDEVLRHRSTIVFTNSRGLAEKLTARLNELYAARLQRSPSIAVD
                     AAHFESTSGATSNRVQSSDVFIARSHHGSVSKEQRAITEQALKSGELRCVVATSSLEL
                     GIDMGAVDLVIQVATPLSVASGLQRIGRAGHQVGGVSKGLFFPRTRRDLVDSAVIVEC
                     MFAGRLENLTPPHNPLDVLAQQTVAAAAMEALQVDEWYSRVRRAAPWKDLPRRVFDAT
                     LDMLSGRYPSGDFSAFRPKLVWNRETGILTVRPGAQLLAVTSGGTIPDRGMYSVLLPE
                     GEEKAGSRRVGELDEEMVYESRVNDIITLGATSWRIQQITRDQVIVTPAPGRSARLPF
                     WRGEGNGRPAELGEMIGDFLHLLADGAFFSGTIPPWLAEENTNANIQGLIDEQRNATG
                     IVPGSRHLVLERCRDEIGDWRIILHSPYGRRVHEPWALAIAGRIHALWGADASVVASD
                     DGIVARIPDTDGKLPDAAIFLFEPEKLLQIVREAVGSSALFAARFRECAARALLMPGR
                     TPGHRTPLWQQRLRASQLLEIAQGYPDFPVILEILRECLQDVYDLPALERLMRRLNGG
                     EIQISDVTTTTPSPFATSLLFGYVAEFMYQSDAPLAERRASVLSLDSELLRNLLGQVD
                     PGELLDPQVIRQVEEELQRLAPGRRAKGEEGLFDLLRELGPMTVEDLAQRHTGSSEEV
                     ASYLENLLAVKRIFPAMISGQERLACMDDAARLRDALGVRLPESLPEIYLHRVSYPLR
                     DLFLRYLRAHALVTAEQLAHEFSLGIAIVEEQLQQLREQGLVMNLQQDIWVSDEVFRR
                     LRLRSLQAAREATRPVAATTYARLLLERQGVLPATDGSPALFASTSPGVYEGVDGVMR
                     VIEQLAGVGLPASLWESQILPARVRDYSSEMLDELLATGAVIWSGQKKLGEDDGLVAL
                     HLQAYAAESFTPAEADQANRSALQQAIVAVLADGGAWFAQQISQRIRDKIGESVDLSA
                     LQEALWALVWQGVITSDIWAPLRALTRSSSNARTSTRRSHRARRGRPVYAQPISPLVS
                     YNTPNLAGRWSLLQVEPLNDTERMLALAENMLDRYGIISRQAVIAENIPGGFPSMQTL
                     CRSMEDSGRIMRGRFVEGLGGAQFAERLTIDRWRDLATQATQTRHYEPPRV"
     gene            complement(4205..4852)
                     /gene="rnt"
                     /locus_tag="JN001_000988"
     CDS             complement(4205..4852)
                     /gene="rnt"
                     /locus_tag="JN001_000988"
                     /EC_number="3.1.13.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T"
                     /protein_id="HAY9052297.1"
                     /translation="MSDNAQLTGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITL
                     KMDEQGWLMPDTTLHFHVEPFVGANLQPEALAFNGIDPNDPDRGAVSEYEALHEIFKV
                     VRKGIKASGCNRAIMVAHNANFDHSFMIAAAERASLKRNPFHPFATFDTAALAGLALG
                     QTVLSKACQTAGMDFDSTQAHSALYDTERTAVLFCEIVNRWKRLGGWPLPAAEEV"
     gene            complement(4955..5362)
                     /gene="gloA"
                     /locus_tag="JN001_000989"
     CDS             complement(4955..5362)
                     /gene="gloA"
                     /locus_tag="JN001_000989"
                     /EC_number="4.4.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactoylglutathione lyase"
                     /protein_id="HAY9052298.1"
                     /translation="MRLLHTMLRVGDLQRSIDFYTKVLGMKLLRTSENPEYKYSLAFV
                     GYGPETEEAVIELTYNWGVDKYELGTAYGHIALSVDNAAEACEKIRQNGGNVTREAGP
                     VKGGTTVIAFMEDPDGYKIELIEEKDAGRGLGN"
     gene            complement(5443..6540)
                     /gene="nemA"
                     /locus_tag="JN001_000990"
                     /pseudo
     CDS             complement(5443..6540)
                     /gene="nemA"
                     /locus_tag="JN001_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416167.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="N-ethylmaleimide reductase"
     gene            complement(6577..7176)
                     /locus_tag="JN001_000991"
     CDS             complement(6577..7176)
                     /locus_tag="JN001_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416166.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY9052299.1"
                     /translation="MNKHTEHDTREHLLATGEQLCLQRGFTGMGLSELLKTAEVPKGS
                     FYHYFRSKEAFGVAMLERHYTAYHQRLTELLQSGEGNYRDRILAYYQQTLNQFCQHGT
                     ISGCLTVKLSAEVCDLSEDMRSAMDKGARGVIALLSQALENGRENHCLTFCGEPLQQA
                     QVLYALWLGANLQAKISRSFEPLENALAHVKNIIATPAV"
     gene            7279..7518
                     /locus_tag="JN001_000992"
     CDS             7279..7518
                     /locus_tag="JN001_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1289 domain-containing protein"
                     /protein_id="HAY9052300.1"
                     /translation="MAEQLEFFPVQSPCRGICQSDERGFCRGCFRSRDERFNWNKMSD
                     GEKQEVLRLCRQRLMRKLRANKPASSDEPEQPSLF"
     gene            7567..8463
                     /locus_tag="JN001_000993"
     CDS             7567..8463
                     /locus_tag="JN001_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HAY9052301.1"
                     /translation="MVQRITIAPQGPEFSRFVMGYWRLMDWNMSARQLVSFIEEHLDL
                     GVTTVDHADIYGGYQCEAAFGEALKLAPHLRERMEIVSKCGIATTAREENVIGHYITD
                     RDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVSNF
                     TPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMAWSCLGGGRLF
                     NDDYFQPLRDELAVVAEELNAGSIEQVVYAWVLRLPSQPLPIIGSGKIERVRAAVEAE
                     TLKMTRQQWFRIRKAALGYDVP"
     gene            8544..9065
                     /gene="sodC"
                     /locus_tag="JN001_000994"
     CDS             8544..9065
                     /gene="sodC"
                     /locus_tag="JN001_000994"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Cu-Zn] SodC2"
                     /protein_id="HAY9052302.1"
                     /translation="MKRFSLAILALVVATGAQAASEKVEMNLVTSQGVGQSIGSVTIT
                     ETDKGLEFSPDLKALPPGEHGFHIHAKGSCQPATKDGKASAAESAGGHLDPQNTGKHE
                     GPEGAGHLGDLPALVVNNDGKATDAVITPRLKSLDEIKDKALMVHVGGDNMSDQPKPL
                     GGGGERYACGVIK"
     gene            complement(9066..10673)
                     /locus_tag="JN001_000995"
                     /pseudo
     CDS             complement(9066..10673)
                     /locus_tag="JN001_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004016165.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
     gene            complement(10754..11063)
                     /locus_tag="JN001_000996"
                     /pseudo
     CDS             complement(10754..11063)
                     /locus_tag="JN001_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011378749.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(11077..11934)
                     /locus_tag="JN001_000997"
     CDS             complement(11077..11934)
                     /locus_tag="JN001_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310380.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY9052303.1"
                     /translation="MSIKTIKYFSIIIVAIVAVLAGWWLWNYYMQSPWTRDGKIRAEK
                     VSITPQVSGRIVELNIKDNQLVNAGDLLLTIDKTPFQIAELNAQAQLAKAQSDLAKAN
                     NEANRRRHLSQNFISAEELDTANLNVKAMQASVNAAQATLKQTQWQLAQTEIRAPVSG
                     WVTNLTTRIGDYADTGKPLFALVDSHSFYVIGYFEETKLRHIREGAPAQITLYSDNKT
                     LRGHVSSIGRAIYDQSVESDSSLIPDVKPNVPWVRLAQRVPVRFALDKVPGDVTLVSG
                     TTCSIAVGQ"
     gene            complement(12000..12173)
                     /locus_tag="JN001_000998"
     CDS             complement(12000..12173)
                     /locus_tag="JN001_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000670993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1656 domain-containing protein"
                     /protein_id="HAY9052304.1"
                     /translation="MKFMLNATGLPLQDLVFGASVYFPPFFKAFAFGFVIWLVVHRLL
                     RGWIYAGDIWHPL"
     gene            12374..12808
                     /gene="slyA"
                     /locus_tag="JN001_000999"
     CDS             12374..12808
                     /gene="slyA"
                     /locus_tag="JN001_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416159.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SlyA"
                     /protein_id="HAY9052305.1"
                     /translation="MESPLGSDLARLVRIWRALIDHRLKPLELTQTHWVTLHNIHQLP
                     PDQSQIQLAKAIGIEQPSLVRTLDQLEEKGLISRQTCASDRRAKRIKLTEKAEPLISE
                     MEAVINKTRAEILHGISAEELEQLITLIAKLEHNIIELQAKG"
     gene            complement(12855..13322)
                     /gene="slyB"
                     /locus_tag="JN001_001000"
     CDS             complement(12855..13322)
                     /gene="slyB"
                     /locus_tag="JN001_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein SlyB"
                     /protein_id="HAY9052306.1"
                     /translation="MIKRVLVVSMVGLSLVGCVNNDTLSGDVYTASEAKQVQNVSYGT
                     IVNVRPVQIQGGDDSNVIGAIGGAVLGGFLGNTVGGGTGRSLATAAGAVAGGVAGQGV
                     QSAMNKTQGVELEIRKDDGNTIMVVQKQGNTRFSPGQRVVLASNGSQVTVSPR"
     gene            13596..14705
                     /gene="anmK"
                     /locus_tag="JN001_001001"
     CDS             13596..14705
                     /gene="anmK"
                     /locus_tag="JN001_001001"
                     /EC_number="2.7.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anhydro-N-acetylmuramic acid kinase"
                     /protein_id="HAY9052307.1"
                     /translation="MKSGRFIGVMSGTSLDGVDVVLATIDEHRVAQLASLSWPIPVSL
                     KQAVLDICQGQQLTLSQFGQLDTQLGRLFADAVNALLKEQNLQARDIVAIGCHGQTVW
                     HEPTGVAPHTLQIGDNNQIVARTGITVVGDFRRRDIALGGQGAPLVPAFHHALLAHPT
                     ERRMVLNIGGIANLSLLIPGQPVGGYDTGPGNMLMDAWIWRQAGKPYDKDAEWARAGK
                     VILPLLQNMLSDPYFSQPAPKSTGREYFNYGWLERHLRHFPGVDPRDVQATLAELTAV
                     TISEQVLLSGGCERLMVCGGGSRNPLLMARLAALLPGTEVTTTDAVGISGDDMEALAF
                     AWLAWRTLAGLPGNLPSVTGASQETVLGAIFPANP"
     gene            14803..15132
                     /gene="mliC"
                     /locus_tag="JN001_001002"
     CDS             14803..15132
                     /gene="mliC"
                     /locus_tag="JN001_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416156.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-type lysozyme inhibitor"
                     /protein_id="HAY9052308.1"
                     /translation="MSMKKLLLICLPVLLTGCSAFNQLVEHMQTATLEYQCDEKPLTV
                     KLNNPRQEVSFVYDNQLLHLKQGISASGARYTDGIYVFWSKGDEATVYKRDRIVLNNC
                     QLQNPQR"
     gene            15191..15847
                     /gene="pdxH"
                     /locus_tag="JN001_001003"
     CDS             15191..15847
                     /gene="pdxH"
                     /locus_tag="JN001_001003"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HAY9052309.1"
                     /translation="MSDNDELQQIAHLRREYTKGGLRRRDLPADPLTLFERWLSQACE
                     AKLADPTAMVVATVDEHAQPYQRIVLLKHYDEKGMVFYTNLGSRKAHQIENNPRVSLL
                     FPWHTLERQVMVIGKAERLSTLEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKF
                     LELKQKFQQGEVPLPSFWGGFRVSLEQIEFWQGGEHRLHDRFLYQRENDAWKIDRLAP
                     "
     gene            15976..17250
                     /gene="tyrS"
                     /locus_tag="JN001_001004"
     CDS             15976..17250
                     /gene="tyrS"
                     /locus_tag="JN001_001004"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HAY9052310.1"
                     /translation="MASSNLIKQLQERGLVAQVTDEEALAERLAQGPIALYCGFDPTA
                     DSLHLGHLVPLLCLKRFQQAGHKPVALVGGATGLIGDPSFKAAERKLNTEETVQEWVD
                     KIRKQVAPFLDFDCGENSAIAANNYDWFGNMNVLTFLRDIGKHFSVNQMINKEAVKQR
                     LNREDQGISFTEFSYNLLQGYDFACLNKQYGVVLQIGGSDQWGNITSGIDLTRRLHQN
                     QVFGLTVPLITKADGTKFGKTEGGAVWLDPKKTSPYKFYQFWINTADADVYRFLKFFT
                     FMSIEEINALEEEDKNSGKAPRAQYVLAEQVTRLVHGEEGLQAAKRITECLFSGSLSA
                     LSEADFEQLAQDGVPMVEMEKGADLMQALVDSELQPSRGQARKTIASNAITINGEKQS
                     DPEYFFKEEDRLFGRFTLLRRGKKNYCLICWK"
     gene            17312..18172
                     /gene="pdxY"
                     /locus_tag="JN001_001005"
     CDS             17312..18172
                     /gene="pdxY"
                     /locus_tag="JN001_001005"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal kinase PdxY"
                     /protein_id="HAY9052311.1"
                     /translation="MKNILAIQSHVVYGHAGNSAAEFPMRRLGANVWPLNTVQFSNHT
                     QYGKWTGCVMPPSHLTEIVQGIAAIDKLHTCDAVLSGYLGSAEQGEHILGIVRQVKAA
                     NPQAKYFCDPVMGHPEKGCIVAPGVAEFHVRHGLPASDIIAPNLVELEILCEHAVNNV
                     EEAVLAARELIAQGPQIVLVKHLARAGYSRDRFEMLLVTADEAWHISRPLVDFGMRQP
                     VGVGDVTSGLLLVKLLQGATLQEALEHVTAAVYEIMVTTKAMQEYELQVVAAQDRIAK
                     PEHYFSATKL"
     gene            complement(18216..18821)
                     /gene="gstA"
                     /locus_tag="JN001_001006"
     CDS             complement(18216..18821)
                     /gene="gstA"
                     /locus_tag="JN001_001006"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase GstA"
                     /protein_id="HAY9052312.1"
                     /translation="MKLFYKPGACSLASHITLRESGKDFTLVSVDLMKKRLENGDDYF
                     AVNPKGQVPALLLDDGTLLTEGVAIMQYLADSVPDRQLLAPVNSISRYKTIEWLNYIA
                     TELHKGFTPLFRPDTPEEYKPTVRAQLEKKLQYVNETLKDEHWICGQRFTIADAYLFT
                     VLRWAYAVKLNLEGLEHIAAFMQRMAERPEVQDALSAEGLK"
     gene            complement(18927..20429)
                     /gene="dtpA"
                     /locus_tag="JN001_001007"
     CDS             complement(18927..20429)
                     /gene="dtpA"
                     /locus_tag="JN001_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpA"
                     /protein_id="HAY9052313.1"
                     /translation="MSTANQKPTESVSLNAFKQPKAFYLIFSIELWERFGYYGLQGIM
                     AVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGY
                     ALVAWSGHDAGIVYMGMAAIAVGNGLFKANPSSLLSTCYEKNDPRLDGAFTMYYMSVN
                     IGSFFSMIATPWLAAKYGWSVAFALSVVGLLITIVNFAFCQRWVKQYGSKPDFEPINY
                     RNLLLTIIGVVALIAIATWLLHNQEVARMALGVVAFGIVVIFGKEAFAMKGAARRKMI
                     VAFILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGLAVEPEQYQALNPFWIIIGSP
                     ILAAIYNKMGDTLPMPTKFAIGMVMCSGAFLILPLGAKFASDAGIVSVSWLVASYGLQ
                     SIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGANLIGGYVAGMMAVPDNVTDP
                     LMSLEVYGRVFLQIGVATAIIAVLMLLTAPKLHRMTQDDAADKAAKAAVA"
     gene            complement(21041..21676)
                     /gene="nth"
                     /locus_tag="JN001_001008"
     CDS             complement(21041..21676)
                     /gene="nth"
                     /locus_tag="JN001_001008"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HAY9052314.1"
                     /translation="MNKAKRLEILTRLRENNPHPTTELNFSSPFELLIAVLLSAQATD
                     VSVNKATAKLYPVANTPAAMLELGVEGVKTYIKTIGLYNSKAENIIKTCRILLEQHNG
                     EVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQFAPGKNVEQVE
                     EKLLKVVPAEFKVDCHHWLILHGRYTCIARKPRCGSCIIEDLCEYKEKVDI"
     gene            complement(21676..22371)
                     /locus_tag="JN001_001009"
     CDS             complement(21676..22371)
                     /locus_tag="JN001_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit E"
                     /protein_id="HAY9052315.1"
                     /translation="MSEIKDVIVQGLWKNNSALVQLLGLCPLLAVTSTATNALGLGLA
                     TTLVLTLTNLTISTLRHWTPAEIRIPIYVMIIASVVSAVQMLINAYAFGLYQSLGIFI
                     PLIVTNCIVVGRAEAFAAKKGPALSALDGFSIGMGATCAMFVLGSLREIIGNGTLFDG
                     ADALLGSWAKVLRVEIFHTDSPFLLAMLPPGAFIGLGLMLAGKYLIDERMKKRRTEAA
                     AERALPNGETGNV"
     gene            complement(22375..22995)
                     /gene="rsxG"
                     /locus_tag="JN001_001010"
     CDS             complement(22375..22995)
                     /gene="rsxG"
                     /locus_tag="JN001_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxG"
                     /protein_id="HAY9052316.1"
                     /translation="MLKTIRKHGITLALFAAGSTGLTAAINQMTKTTIAEQASLQQKA
                     LFDQVLPAERYNNALAQSCYLVTAPELGKGEHRVYIAKQDDKPVAAVLEATAPDGYSG
                     AIQLLVGADFNGTVLGTRVTEHHETPGLGDKIELRLSDWITHFAGKKISGADDAHWAV
                     KKDGGDFDQFTGATITPRAVVNAVKRAGLYAQTLPAQLSQLPACGE"
     gene            complement(22999..24057)
                     /gene="rsxD"
                     /locus_tag="JN001_001011"
     CDS             complement(22999..24057)
                     /gene="rsxD"
                     /locus_tag="JN001_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxD"
                     /protein_id="HAY9052317.1"
                     /translation="MVFRIASSPYTHNQRQTSRIMLLVLLAAVPGIAAQLWFFGWGTL
                     VQILLASVSTLLAEALVLKLRKQSVAATLKDNSALLTGLLLAVSIPPLAPWWMVVLGT
                     VFAVIIAKQLYGGLGQNPFNPAMIGYVVLLISFPVQMTSWLPPHEIAVNIPGFIDAIQ
                     VIFSGHTASGADMNTLHLGIDGISQATPLDTFKTSVRAGHSVEQIMQYPIYSGILAGA
                     GWQWVNLAWLAGGLWLLWQKAIRWHIPLSFLVTLALCATLGWLFSPETLAAPQIHLLS
                     GATMLGAFFILTDPVTASTTNRGRLIFGALAGLLVWLIRSFGGYPDGVAFAVLLANIT
                     VPLIDYYTRPRVYGHRKG"
     gene            complement(24058..26280)
                     /gene="rsxC"
                     /locus_tag="JN001_001012"
     CDS             complement(24058..26280)
                     /gene="rsxC"
                     /locus_tag="JN001_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxC"
                     /protein_id="HAY9052318.1"
                     /translation="MLKLFSAFRKNKIWDFNGGIHPPEMKTQSNGTPLRQVPLAQRFV
                     IPLKQHIGAEGELCVSVGDKVLRGQPLTRGRGKMLPVHAPTSGTVTAIAPHSTAHPSA
                     LAELSVIIDADGEDCWIPRDGWADYRTRSREELIERIHQFGVAGLGGAGFPTGVKLQG
                     GGDKIETLIINAAECEPYITADDRLMQDCAAQVVEGIRILAHILQPREILIGIEDNKP
                     QAISMLRAVLADSNDISLRVIPTKYPSGGAKQLTYILTGKQVPHGGRSSDIGVLMQNV
                     GTAYAVKRAVIDGEPITERVVTLTGEAIARPGNVWARLGTPVRHLLNDARFCPSADQM
                     VIMGGPLMGFTLPWLDVPVVKITNCLLAPSANELGEPQEEQSCIRCSACADACPADLL
                     PQQLYWFSKGQQHDKATTHNIADCIECGACAWVCPSNIPLVQYFRQEKAEIAAIRQEE
                     KRAAEAKARFEARQARLEREKAARLERHKSAAVQPAAKDKDAIAAALARVKEKQAQAT
                     QPIVIKAGERPDNSAIIAAREARKAQARAKQAELQQTNDAATVADPRKTAVEAAIARA
                     KARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAEPEEQVDPRKAAIE
                     AAIARAKARKLEQQQANAEPEEQVDPRKAAVEAAIARAKARKLEQQQANAVPEEQVDP
                     RKAAVEAAIARAKARKLEQQQTNAEPEEQVDPRKAAVAAAIARAQAKKAAQQKVVNED
                     "
     gene            complement(26273..26851)
                     /gene="rsxB"
                     /locus_tag="JN001_001013"
     CDS             complement(26273..26851)
                     /gene="rsxB"
                     /locus_tag="JN001_001013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxB"
                     /protein_id="HAY9052319.1"
                     /translation="MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEIL
                     PQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQE
                     LTPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTH
                     CISLQPVAETPDSWKWDLNTIPVRIIPVEHHA"
     gene            complement(26851..27432)
                     /gene="rsxA"
                     /locus_tag="JN001_001014"
     CDS             complement(26851..27432)
                     /gene="rsxA"
                     /locus_tag="JN001_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017456621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transport complex subunit RsxA"
                     /protein_id="HAY9052320.1"
                     /translation="MTDYLLLFVGTILVNNFVLVKFLGLCPFMGVSKKLETAMGMGLA
                     TTFVMTLASICAWLIDTWILIPLNLIYLRTLAFILVIAVVVQFTEMVVRKTSPVLYRL
                     LGIFLPLITTNCAVLGVALLNINLGHNFLQSALYGFSAAVGFSLVMVLFTAIRERLAV
                     ADVPAPFRGNAIALITAGLMSLAFMGFSGLVKL"
     gene            complement(27509..27949)
                     /locus_tag="JN001_001015"
     CDS             complement(27509..27949)
                     /locus_tag="JN001_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707526.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2569 domain-containing protein"
                     /protein_id="HAY9052321.1"
                     /translation="MTTTTPQRIGGWLLGPLAWLLVALLSTTLALLLYTAALSSPQTF
                     QTLGGQALTTQILWGVSFITAIAMWYYTLWLTIAFFKRRRCVPKHYIIWLLISVLLAV
                     KAFAFSPVEDGIAVRQLLFTLLATALIVSYFKRSSRVKATFVNP"
     gene            complement(28035..28250)
                     /gene="ydgT"
                     /locus_tag="JN001_001016"
     CDS             complement(28035..28250)
                     /gene="ydgT"
                     /locus_tag="JN001_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription modulator YdgT"
                     /protein_id="HAY9052322.1"
                     /translation="MTVQDYLLKFRKISSLESLEKLYDHLNYTLTDDQELINMYRAAD
                     HRRAELVSGGRLFDLGQVPKSVWHYVQ"
     gene            complement(28523..28648)
                     /gene="blr"
                     /locus_tag="JN001_001017"
     CDS             complement(28523..28648)
                     /gene="blr"
                     /locus_tag="JN001_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division septum protein Blr"
                     /protein_id="HAY9052323.1"
                     /translation="MNRLIELTGWIVLVVSVILLGVASHIDNYQPPEQSASVQHK"
     gene            28861..29901
                     /locus_tag="JN001_001018"
     CDS             28861..29901
                     /locus_tag="JN001_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY9052324.1"
                     /translation="MSDNIRVGLIGYGYASKTFHAPLIAGTPGLELAVISSSDETKVK
                     ADWPTVTVVSEPKHLFNDPNIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLS
                     QARELDALAKSLGRVLSVFHNRRWDSDFLTLKGLLAEGVLGEVAYFESHFDRFRPQVR
                     DRWREQGGPGSGIWYDLAPHLLDQAITLFGLPVSMTVDLAQLRPGAQSTDYFHAILSY
                     PQRRVILHGTMLAAAESARYIVHGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRD
                     GVLTRVEGEERVEETLLTVPGNYPAYYAAIRDALNGDGENPVPASQAIQVMELIELGI
                     ESAKHRATLCLA"
     gene            complement(29936..30937)
                     /gene="add"
                     /locus_tag="JN001_001019"
     CDS             complement(29936..30937)
                     /gene="add"
                     /locus_tag="JN001_001019"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HAY9052325.1"
                     /translation="MIDTTLPLTDIHRHLDGNIRPQTILELGRQYNISLPAQSLETLI
                     PHVQVIANEPDLVSFLTKLDWGVKVLASLDACRRVAFENIEDAARNGLHYVELRFSPG
                     YMAMAHKLPVAGVVEAVIDGVREGCRTFGVQAKLIGIMSRTFGEAACQQELEAFLAHR
                     DQITALDLAGDELGFPGSLFLSHFNLARDAGWHITVHAGEAAGPESIWQAIRELGAER
                     IGHGVKAIEDRALMDFLAEQQIGIESCLTSNIQTSTVAELAAHPLKTFLEHGIRAGIN
                     TDDPGVQGVDIIHEYTVAAPAAGLSREQIRQAQINGLEMAFLSAEEKRALREKVAAK"
     gene            complement(31040..32212)
                     /gene="malY"
                     /locus_tag="JN001_001020"
     CDS             complement(31040..32212)
                     /gene="malY"
                     /locus_tag="JN001_001020"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional maltose regulon transcriptional
                     repressor/cystathionine beta-lyase MalY"
                     /protein_id="HAY9052326.1"
                     /translation="MFDFSKVVDRHGTWCTQWDYVADRFGTADLLPFTISDMDFATAP
                     CIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSE
                     LIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCNMGKLEAVLAK
                     PECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWS
                     NVARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTA
                     HIAAYQQGAPWLDALRIYLKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNID
                     DNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAVR"
     gene            complement(32222..33814)
                     /locus_tag="JN001_001021"
     CDS             complement(32222..33814)
                     /locus_tag="JN001_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS maltose transporter subunit IICB"
                     /protein_id="HAY9052327.1"
                     /translation="MTAKTAPKVTLWEFFQQLGKTFMLPVALLSFCGIMLGIGSSLSS
                     HDVITLIPVLGNPVLQAIFTWMSKIGSFAFSFLPVMFCIAIPLGLARENKGVAAFAGF
                     VGYAVMNLAVNFWLTNKGILPTTDAAVLKANNIQSILGIQSIDTGILGAVIAGIIVWM
                     LHERFHNIRLPDALAFFGGTRFVPIISSLVMGLVGLVIPLVWPIFAMGISGLGHMINS
                     AGDFGPMLFGTGERLLLPFGLHHILVALIRFTDAGGTQEVCGQTVSGALTIFQTQLSC
                     PTTHGFSESATRFLSQGKMPAFLGGLPAAALAMYHCARPENRHKIKGLLISGLIACVV
                     GGTTEPLEFLFLFVAPVLYVIHALLTGLGFTVMSVLGVTIGNTDGNIIDFVVFGILHG
                     LSTKWYMVPVVAAIWFVVYYAIFRFAITRFNLKTPGRDSEVASSIEKAVAAAPGKSGY
                     NVPAILEALGGADNIVSLDNCITRLRLSVKDMSLVNVQALKDNRAIGVVQLNQHNLQV
                     VIGPQVQSVKDEMAGLMHTVQA"
     gene            33989..35017
                     /locus_tag="JN001_001022"
     CDS             33989..35017
                     /locus_tag="JN001_001022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mal regulon transcriptional regulator MalI"
                     /protein_id="HAY9052328.1"
                     /translation="MATAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNAA
                     IEELGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHG
                     GKDGEQLAQRFSLLLNQGVDGVVIAGAAGSSDDLRRMAEEKAIPVIFASRASYLDDVD
                     TVRPDNMQAAQLLTEHLIRNGHQRIAWLGGQSSSLTRAERVGGYCATLLKFGLPFHSD
                     WVLECTSSQKQAAEAITALLRHNPTISAVVCYNETIAMGAWFGLLKAGRQSGESGVDR
                     YFEQQVSLAAFTDATPTTLDDIPVTWASTPARELGTTLADRMMQKITHEETHSRNLII
                     PARLIAAK"
BASE COUNT         8787 a         9014 c         9133 g         8154 t
ORIGIN      
        1 acccggggcg gttcatagtg gcgcgtttgc gtggcttgtg tcgccagatc gcgccatcgg
       61 tcaatagtca gacgttcagc gaattgcgcg ccacccagac cttctacaaa acgacctcgc
      121 ataattcgcc cggagtcttc catacttcga caaagcgttt gcatcgatgg aaacccgcca
      181 gggatatttt cggctatcac cgcctgacga ctgatgatgc cgtagcggtc gagcatattt
      241 tccgccagcg ccagcatcct ttcggtatcg tttagtggct ccacctgcaa taacgaccag
      301 cgtccagcca gatttggtgt gttgtaagat accagcggcg agatgggttg cgcatagaca
      361 ggacgtccac gacgagcccg gtgactgcgg cgagttgagg tgcgtgcgtt ggaactgctg
      421 cgggtgaggg cgcgtaacgg tgcccaaatg tcgctggtga tgacgccttg ccagaccagc
      481 gcccataacg cctcttgcag ggcagagaga tcaaccgatt cgccgatttt gtcgcgtatc
      541 cgttggctga tttgttgtgc aaaccaggct cctccgtcag ccagaacagc gactatcgct
      601 tgttgcagcg ccgaacgatt cgcctgatcc gcttcggcgg gagtgaacga ttctgcagca
      661 tatgcctgta gatgcagtgc caccaggccg tcatcttcac ccagtttttt ttgccccgac
      721 cagataaccg caccggttgc cagtaattca tcgagcattt ctgacgaata gtcgcgtacg
      781 cgggcaggca ggatctggct ttcccagagt gaggcgggta aaccgactcc ggcaagctgt
      841 tcgatcaccc gcatcacgcc atctacgccc tcataaacgc ctggcgatgt tgaggcaaag
      901 agcgccgggc taccatcggt ggcgggtaat acgccctgac gttccagcag caatcgcgca
      961 taggtcgtgg ctgcaacggg acgcgtcgct tctctggcgg cttgcagcga gcgcaaacgc
     1021 agacgacgaa atacttcatc gctcacccag atgtcttgtt gcagattcat caccagaccc
     1081 tgttcacgca gttgctgaag ctgctcttcg acaatggcaa taccgagact aaactcatga
     1141 gccagttgtt cagccgtgac cagagcatga gcccggagat agcgcagaaa gaggtcgcga
     1201 agcgggtaac tgactctatg taaataaatc tctggcaatg actctggtag tcgtacgccg
     1261 agggcatcac gcagcctggc ggcatcatcc atacaggcaa gacgctcctg tccgctaatc
     1321 atcgctggga agattcgttt tactgcaaga agattttcca gatacgacgc aacctcttca
     1381 ctgctgcctg tatgccgttg cgccaggtct tcaacggtca ttggccccag ttcgcgcagc
     1441 aggtcgaaca atccttcttc acctttcgct cttctgccag gagccagtcg ttgcaactct
     1501 tcttccacct ggcgaatgac ctgcgggtcg agtaattccc ccggatcgac ctgtccgagt
     1561 agattgcgca gtaactcgct gtccagcgac agtacggatg cccggcgctc tgccagcggg
     1621 gcgtcgctct ggtacataaa ttccgcgaca tagccgaaca ataaacttgt ggcgaaaggc
     1681 gagggcgtag tggtcgttac atcggatatt tgaatttcgc caccgttcag gcgacgcatc
     1741 aaacgttcca gtgcgggaag atcataaaca tcttgcagac attcgcgtag gatttcgaga
     1801 atgaccggaa aatctggata tccctgagcg atttccagca actgactggc gcgcagccgt
     1861 tgttgccaaa gcggggtgcg atggcccgga gtgcgccccg gcattaataa tgcccgcgcg
     1921 gcgcattcgc gaaaacgggc ggcgaaaagt gccgagctgc ctaccgcctc gcggacaatt
     1981 tgcagcaact tttctggttc aaacaaaaaa atcgcggcgt cgggcaattt accatcagtg
     2041 tcaggaatgc gcgcaacaat gccgtcatca ctggcgacca cagacgcgtc agcgccccat
     2101 agggcatgta ttcgcccggc aatcgccagc gcccagggtt catgcacccg tcttccatag
     2161 ggagagtgca aaataatacg ccagtcgcca atttcatcac ggcaccgttc gaggaccaga
     2221 tggcgactcc ccggaacgat gcccgtcgcg ttgcgttgct cgtcaatcaa cccctgaata
     2281 ttggcgttcg tattttcttc tgccagccac gggggaatag tcccggaaaa gaacgcgcca
     2341 tccgccagta aatgaagaaa atcgccgatc atctcgccta attcagccgg acgtccgtta
     2401 ccttcaccac gccagaaggg gagccgggca gaacgacccg gagcaggagt cacaatcacc
     2461 tgatcgcggg tgatttgctg gatccgccat gaggtagcgc cgagagtgat aatgtcgttc
     2521 acccgcgact catataccat ctcctcatcc agttcaccca cccgccgcga accggccttt
     2581 tcttcacctt cgggtaataa cacgctatac atgccacgat ccggaatggt gccgccgctg
     2641 gtaaccgcca acaattgagc gccaggtcgg acggtcaata tcccggtctc cctgttccag
     2701 accagtttgg ggcgaaaagc agaaaaatcg ccagagggat agcgcccgga aagcatatcc
     2761 agcgtggcgt caaaaacacg tcttggcaga tctttccacg gtgcggcacg gcgtacgcgg
     2821 gagtaccatt cgtctacctg taatgcctcc atcgccgcgg cggcaacggt ttgctgcgca
     2881 aggacgtcga gtggattatg cggcggtgtc aggttttcca gcctgcctgc gaacatacac
     2941 tctacaatga ctgcggaatc gactaagtca cgccgggtac gagggaaaaa cagcccttta
     3001 gatacaccgc caacctgatg tccggcgcga ccaatgcgtt gtaacccact ggcaacagaa
     3061 agcggcgttg ccacctgaat caccagatcc actgcgccca tatcaatccc cagttcgaga
     3121 ctggaggttg cgaccacgca gcgtaactca cccgatttca gcgcctgctc ggtgattgct
     3181 cgttgttctt tagagacgga gccgtggtgt gagcgggcaa taaaaacgtc gctactttgt
     3241 acacggttag aggttgcgcc ggaggtcgac tcgaaatggg ccgcatcaac ggcgatagac
     3301 ggggaacgct gtaagcgtgc ggcgtaaagc tcatttaatc gtgccgtcag tttttccgcc
     3361 agcccacgtg aattagtaaa gacaatggtc gagcgatggc gcaacacttc atcaaggata
     3421 cccgtttcaa tatatggcca gatggagcct tcccggccgg catggctgtc ttcgccggtg
     3481 ctgctggcga ccgatgagac atcatccata ttggcgaccg gtacgacaat tcgtatctgc
     3541 ggatggcgca ttgcgggcgg gttgactacc gtaaccgggc gatcgccacc aagaaaggct
     3601 gccacatcgc tggctgagcg cacagtggca gaaaggccaa ttcgctgtgc tgaggtgtgg
     3661 agcagcgcat cgagccgctc cagacttaac gccagatgcg caccacgttt actgcccgct
     3721 accgcgtgga cttcatcaat aattaccgtt tcgccgcgcc gccgccgttc atcggcaata
     3781 cccttcaacg ggagctgcaa gttgcgctga acgtcggtgc ccagagcttt tatcggtgaa
     3841 atatagagga tgcgtgaggt tttacgctta tgcgcctcgc gggtatcttc gccgccttcg
     3901 cggaagagcc gatcgagggc gtagagaaat gctgccagcg ttttcccgga gccggtcggt
     3961 gcaatcacca gcgcatgttc gcttcgcgcc gccacatgcc aggtttgcga ctggacagcg
     4021 gtcggctgtt taaaggcgcg aagaaaccag tcgcgggtcg ccggtgaaaa cacgtccggc
     4081 aggagcgatg aagggtctgg attatctgcc attaacgcta ttccccgtga atatcatgca
     4141 ggatgcgtgg aatagcctca ctatagatgc ctgaatcatt gcatgtcatc aggcatcgac
     4201 tcgattacac ctcttcggcg gcaggtagcg gccagcctcc cagacgtttc cagcggttga
     4261 cgatttcaca aaacagcaca gcagtgcgtt cggtgtcgta cagcgcggag tgcgcctggg
     4321 tgctgtcgaa gtccatgcca gcggtctggc aagcctttga caatacggtt tgtccgagtg
     4381 ccagcccggc cagtgcagca gtgtcaaaag tggcgaaagg gtggaacggg ttacgtttca
     4441 gtgaggcgcg ttctgcggcg gctatcataa agctgtgatc aaaattggca ttgtgcgcca
     4501 ccataatggc gcggttacag ccgctcgctt taataccttt acgtacaact ttaaaaattt
     4561 cgtgcagcgc ctcgtattcg ctgaccgcgc cacgatcggg atcgttcggg tcaatgccgt
     4621 tgaaggcgag ggcttctggt tgcaaatttg cgccgacaaa tggttcgacg tggaaatgta
     4681 atgtggtgtc cggcatcagc cagccttgtt catccatttt cagggtgatg gcggcaatct
     4741 caagcagcgc atcggttttg gcgttaaatc cggctgtttc aacatcgatc acaacaggat
     4801 aaaaaccacg aaaacggtcg cacagaccgg taagttgagc gttatcggac atctgattct
     4861 cttaatacgg ataaattgca gcgcgcatta tgacaaatat tacttgtcga tgcagtaaag
     4921 atgcgggcgc gatgagttca cgcccggcag gagattagtt gcccagaccg cgaccggcgt
     4981 ctttctcttc gattaactca attttgtaac cgtccggatc ttccataaac gcgataaccg
     5041 tagtaccgcc ttttaccgga cccgcttcac gggtcacgtt acccccgttt tgacggattt
     5101 tttcgcacgc ttcagcggcg ttatctacgc taagcgcgat gtgaccataa gcagtgccga
     5161 gttcgtattt atccacgccc cagttgtagg tcagttcaat caccgcttct tcggtttccg
     5221 ggccgtagcc aacaaacgcc agtgagtatt tgtattccgg gttttcgctg gtacgcagca
     5281 gtttcatgcc cagcactttg gtataaaaat cgatggagcg ttgcaaatcg ccaacgcgca
     5341 gcatggtatg aagaagacgc atctttttat cctcaaaatg gctaacagat tcaaaatgtt
     5401 gttttagtat agcggcggct ttacgccgct cgcaatgttg gattacaacg tcgggtaatc
     5461 ggtatagcct tccgcgccgc caccgtagaa actttcggca cgctgtgggt taagctcagc
     5521 tttgcgctgc aagcgggcga ccagatccgg gttcgcaatc cagtcacgac caaatgccac
     5581 cgcatcaatt aaccctttgc cgatcagcgt ttcagctttt tctactgtgt atgcacctgc
     5641 gccgataatc ggaccgtgga aacgggcgcg tactttttcg cggaacgcat cagtatacgg
     5701 ttcacccccc gcccaatctg gttctgacat atgcagataa gcaatgccgc gtttacccag
     5761 ttgttcaatc agatacagtg catcggcttc ttcattcggg ccgttatccg tgttctggaa
     5821 agtaccgatt ggcgaaatgc gaatgccaat gcgatcggca ccccattctt caatcccggc
     5881 atcgaccact tccagtacca gacgtgcgcg attttccacg ctgccgccgt actgatcggt
     5941 acgatggttt gaagaaggag aaaggaactg atgcagcaaa taaccgtgag cagagaggag
     6001 ctctaccaga tcaaaaccgg cttcacgcgc gttagcaatg gcctgacgga aatcattgac
     6061 gatacctgga atctcttcta gttcaagcgc acgcggcatg gatgtttcaa cacggatcgc
     6121 ctgaccattt tcatcgcgca gagaagtacg tgttcccgcg ctaagtgctg aaggcgctac
     6181 cggtgcctga ccgccaggtt gcaggctggc gtgagaaatg cgtccggtgt gccacagcta
     6241 cacggccata tgaccatttt cagcatgaac gccagcggtg atttttttcc atgcggcaat
     6301 ttgctccgga ctatggatgc caggcgcacc tgcatatcct tttacctggg cagaaatttg
     6361 cgtggcttca ctaataatca aaccggcact ggcacgttgg cgatagtatt ccgccatcaa
     6421 cggggtagga atgtcacccg gttcaatact gcgcagacgc gtcagcggtg ccataaaaat
     6481 acggtttgcc gccgtgatcg cgcccacttt cagtggggaa tacagttttt cagatgacat
     6541 aaaggctccc ggtcgtctgg tgataaaaaa tgcctgctaa acggcaggcg tcgcaataat
     6601 gttttttaca tgggccagcg cgttttccag tggctcgaaa ctgcgcgaaa ttttggcctg
     6661 cagattcgca cccagccata gtgcgtaaag cacttgtgcc tgttgtagcg gttcgccaca
     6721 aaaggttaaa caatggttct cacggccatt ttccagcgcc tgagagagca gggcgatcac
     6781 gccgcgagca cctttatcca tcgcgctgcg catatcttct gacagatcgc acacttcggc
     6841 agagagtttt actgtcaggc aaccactgat ggttccatgt tggcaaaact ggttcagtgt
     6901 ttgctggtaa taagccagta tgcggtcgcg gtagttacct tcgccggatt gcagcaactc
     6961 agtcagtcgc tggtgatatg cggtgtaatg acgctcaagc atggcaacgc caaacgcttc
     7021 tttagagcga aagtagtgat agaaggaccc tttcggcact tcagcggttt ttagtaattc
     7081 gcttagcccc atcccggtga atccacgttg caggcaaagt tgctcgcccg tcgccaggag
     7141 atgttcgcga gtatcatgtt cggtgtgttt gttcatgcgt tggagtgtag tagaccagtc
     7201 ggtctagtgc aagcaaagtt gctactttgg acattaacag cttcaataat ggtaataatc
     7261 ttatctgagg agggcgaagt ggcggagcaa ttagagttct ttcccgtcca gagcccgtgc
     7321 cggggaattt gccagtctga cgaacgcggg ttttgtcgcg gctgttttcg tagtcgggat
     7381 gagcgtttta actggaataa aatgagcgat ggcgaaaaac aagaggtgct gcgcctttgt
     7441 cggcagcgat taatgcgcaa attacgcgca aataagccag cgtcatcaga cgaaccggag
     7501 caaccatcac tcttttgaac ctaatcttgc gtatactcct ctcatatctg ataagaggaa
     7561 gcgattatgg ttcagcgtat tactattgcg ccgcaaggcc cggagttttc ccgttttgtg
     7621 atgggctact ggcgattgat ggactggaat atgtccgccc gccagctggt cagttttatt
     7681 gaagagcatc tggatctcgg cgtgaccacc gtggaccatg ctgatattta tggtggctat
     7741 cagtgcgaag cggcgtttgg cgaggcactg aaactggcac ctcacctgcg tgaacggatg
     7801 gaaatcgtca gtaaatgcgg tatcgcgacg accgcgcgtg aagaaaacgt cattggtcat
     7861 tacatcactg accgcgatca catcattaag agcgccgaac agtcgctaat taatctcgcg
     7921 accgatcatc tggatctgct gttaatccac cgaccagacc cgttaatgga tgccgatgaa
     7981 gtggcggacg cgttcaaaca tctgcatcag agcggcaaag tgcgtcattt tggcgtatcg
     8041 aactttacgc ctgcgcaatt tgccctgttg caatcacgtc tgccgtttac ccttgccact
     8101 aatcaggtgg aaatatcccc ggtgcatcag ccgttactgc tggatggcac gctcgaccaa
     8161 ctacaacaac tgcgtgttcg tccgatggcg tggtcctgcc ttggtggtgg tcgtctgttt
     8221 aatgatgatt atttccagcc gctgcgtgat gaactggctg tggtggcaga ggagttaaac
     8281 gcgggctcga ttgaacaggt ggtttacgcc tgggtattac gtttaccatc gcagccgctg
     8341 ccaattatcg gttcaggtaa aattgagcgc gtacgggcag ctgtcgaagc agaaacactg
     8401 aaaatgaccc gtcaacaatg gtttcgtatt cgtaaagcgg cactggggta cgacgtaccg
     8461 taagcacttt taggaatagc cgccgttcaa aaatgtgtca ctggtttaca cttattcagg
     8521 aatgcacaat gaacggaggt cctatgaaac gttttagtct ggctattctg gcgctggttg
     8581 ttgcaaccgg cgcacaagct gccagtgaaa aagtcgagat gaacctcgtc acgtcgcaag
     8641 gggtagggca gtcaattggt agcgtcacca ttactgaaac cgataaaggt ctggagtttt
     8701 cgcccgatct gaaagcatta ccccccggtg aacatggctt ccatattcat gccaaaggaa
     8761 gctgccagcc agccaccaaa gatggcaaag ccagcgccgc ggaatccgca ggcgggcatc
     8821 ttgatccaca aaataccggt aaacatgaag ggccagaagg tgccgggcat ttaggcgatc
     8881 tgcctgcact ggtcgtcaat aatgacggca aagctaccga tgccgtcatc acgcctcgtc
     8941 tgaaatcact ggatgaaatc aaagacaaag cgctgatggt ccacgttggc ggcgataata
     9001 tgtccgatca acctaaaccg ctgggcggtg gcggtgaacg ctatgcctgt ggtgtaatta
     9061 agtaattaag aggcctgcgt accttgcggt ggtgcttgct caagttgcga aagcgagcag
     9121 tacagccgcc agacaattgc cgccagctca cgggcggcag gttgatgatg acgggcaagg
     9181 ctgtcgcaaa tccgctgtaa ttcttcaagt gtggccgcca gtgatttttg ctgaacgcca
     9241 cgctcactca tcactccccg caacagtgaa atacagttat cccgtactcg cgataacgga
     9301 tcggaacgcg attcccagtc gcgcaattgc cagacaacat gagaacagtt cagcagcact
     9361 acaccccagc gtaataacca acggcgagcc agcgcatcct ggctgttact caactgactg
     9421 acgtgatgat aagtgagcga ttcaaattcg ctttcactca gtgttggatg gcggcttagc
     9481 tgatcgacaa aatcccggcg cagcgcgcga atatggcggc ggcttttacg agcatccgat
     9541 cctggacgca gaatggcgaa cgctagccaa gccagcgcaa cgccaacgat ttttgccaga
     9601 ttatcgttaa gaaagtcagc aaaatcatac accgggggat tagtgacagc gataaacgaa
     9661 cccataaaaa caatcagttg cccccacagt gcggcaaatt tgggcatctg caatttaaga
     9721 agctgcattg tcgccagcag tggaaagaga aacagtaaaa attgccacag atcgctaatc
     9781 tggaccatca ggccaaattt gaccacaaag ctgaatagcg aaagtaacac cagcgtgcgc
     9841 atcagcagtg acaacgactt aaacggtgct gcgacggcgg agtagagtac gcagctaatt
     9901 gctgccagcg ttaatgcatt ggcaccggca tcctattgcg atgcaatact ccatgcgcca
     9961 atcatcatca acgtacaaaa tgtacgcagc ccgctccaca tagcttcggc gttgtcggta
    10021 tgacgagcca gagcggatgt ccgtgcgagt ctggcatgat catctacacc gctttgcaga
    10081 cgatgtaatt cctgactact ttgcagataa aggcggcaaa aataacgtag tcgctgccag
    10141 aaggcgacgt gccggtagtc ggcgacgttg gtcgggcgta gcggggcgat aatacgtgcg
    10201 acggtgtaag catctgtttg cgaactggcg agcgccgtca gcaattgttc gagaatttct
    10261 cgcgtggcac ctggcggtga gggccagttg agcaacatac gtcgcaggct ggagatgaca
    10321 ctggtcatac gtaattgctg gtggagtagc gcattaaggc gcgcgttttg ctggcgaaaa
    10381 cgatagtggc tccagaaagc ctggatacgc agcaaattca tggtcagtat ctgcccaatc
    10441 cccccctcat gtgctgcacg aatggcatcg tttgtttcag gctgccagag taaactggca
    10501 tgttccagta atcgggcgtg catgtttttc aatgcggtta aaagggctgt agcatcggaa
    10561 ctgctaggca ggatcatcat catcatgccg ccgcacaaaa taccgactat cacctcgcaa
    10621 acgcgcgcct gagcgatatc ctacagctgg ctggcctcag taatattaac catcggaaag
    10681 gcgatgatgg cagccgtgta gccgccagtt gaaatgcata cgcgacgtta ttcgtgaagt
    10741 gcgcacaggc ccaggtacaa aagccaagcc acgccgacat gctcaataga aaaaaccacg
    10801 gctcattgag cgtatgcccg gcaagaagca gtgccgcaat ggctcccagt aaactgccag
    10861 cgatgcgtcc gaggcttttg ctgatgacac cgccaacggt gggaaagcta accactgcag
    10921 ccgaggtcat cgcccaatag ggttcatcca gattcaaata ataggcaacc gtcagcgcca
    10981 gacacatggc aatggtattg cgtaacgcat aacgccattg cgccagcgtg gccttgaacc
    11041 agggcaaatt gcgcaaggac catgacgatg cgttcattat tgacctacgg caatgctaca
    11101 ggtggtgccc gacaccagcg tgacatcgcc tggaacttta tccagcgcaa agcggacggg
    11161 aacgcgttgg gcgagacgaa cccaggggac gttaggtttc acatccggaa taaggcttga
    11221 gtcactttca acgctttgat cataaatcgc ccgaccgata ctggaaacgt gaccccgtaa
    11281 cgttttgtta tcactataga gggtaatttg tgctggtgca ccttcgcgga tatggcgcaa
    11341 cttggtttct tcaaaataac caatgacgta aaacgagtgg ctgtcgacaa gggcaaacag
    11401 cggtttcccg gtgtcagcgt aatcgccgat gcgggtagtg aggttagtca cccaaccact
    11461 caccggggcg cgaatttccg tttgcgccag ttgccattgt gtctgtttca gcgtggcctg
    11521 tgcggcatta acactggcct gcatcgcttt aacattgagg ttagcggtat cgagttcttc
    11581 ggcagaaata aaattttgtg agagatgacg acgacgattc gcttcgttat tggcttttgc
    11641 gaggtcagat tgcgctttcg ccagctgagc ctgtgcgttc agctcggcga tctgaaaggg
    11701 cgttttatcg atcgtgagca gaagatcccc cgcgttaacc agttggttgt cttttatatt
    11761 cagctcaaca atacgtcccg acacctgtgg ggtgatagaa accttttctg cgcgtatttt
    11821 cccgtcgcgt gtccacggag attgcatgta ataattccac agccaccatc cggcaagaac
    11881 cgcaactatc gctacaataa ttattgagaa atacttaatt gttttaattg acatagttac
    11941 cacgcaatca gtattgccag agcaaggcaa acgcaaatcg caaacagcga taaatccatt
    12001 tacaagggat gccagatgtc accggcgtag atccagccac gaagcaggcg gtgtacgaca
    12061 agccagatga cgaatccaaa cgcgaaggct ttgaaaaacg gaggaaaata gacggacgca
    12121 ccgaacacca gatcttgtaa gggcaatcct gttgcattga gcataaactt cacaaagtag
    12181 attcctttac gaccgaatat attgcgttag attaataaat attctttaag tgcgaaaaat
    12241 ttacgcgcaa tttctgaaaa atatgtctga cggtaaccaa atgcagcaat acatttgttt
    12301 tagcaataaa attgctgcac actattctaa aagccgcata atatcttagc aagctaatta
    12361 taaggagatg aaattggaat cgccactagg ttctgatctg gcacggttgg tgcgcatatg
    12421 gcgtgctctg atagaccatc gcctgaaacc gctggagtta acacaaaccc attgggttac
    12481 gttacacaat atccatcagt tacctccaga ccagtcgcaa attcaactgg caaaagcgat
    12541 tggcatcgag cagccatcac tggtccgtac tctggaccaa ctggaagaaa aagggttaat
    12601 ttcgcgtcaa acttgtgcca gcgatcgtcg ggctaaacgt attaaactga cggaaaaggc
    12661 agagccactg atcagcgaaa tggaagctgt tattaacaaa acccgcgcgg aaatattaca
    12721 tggcatctcc gcagaggaac tggagcaact gattacgctc atcgcaaaac ttgagcataa
    12781 tatcattgag ttacaggcca aagggtgaaa tgaagggggc gtgtggtcag taacctgacc
    12841 acacgcaaac ttatttagcg cggagaaacg gtcacctgac tgccattgct ggccagtacg
    12901 acacgttggc ccggagagaa acgagtgttg ccttgtttct gtaccaccat gatggtatta
    12961 ccatcgtctt tacgaatttc cagctcgaca ccctgcgttt tgttcattgc actctgtacg
    13021 ccctgaccag ctacgccacc tgcaacagcg cctgctgcag tagccagaga acgcccggtt
    13081 ccgccaccaa cagtattccc caggaaacca ccaagaacag caccgccaat tgcaccgata
    13141 acgttggaat catcaccgcc ctgaatctgt accggacgta cgttaacgat ggtgccatag
    13201 ctgacattct gtacttgttt cgcttcagaa gcggtataaa catcccctga cagggtgtcg
    13261 ttattaacac aaccgacaag agacagacct accattgaaa caaccaatac gcgtttaatc
    13321 attgaaaaat ctcctgttca ccatgaaacg ccacgcaagc atccctcatg gtcaaagtat
    13381 atggcatatg tgaatccatg gttacatgtt ctaccaaata tgagcaaatc ataatgaaag
    13441 taggatcaac caattataaa caaaacattc atgatgatta ttgatttgaa gataatgttt
    13501 tactaccaac ggtaaaaatc ggtcattccg catggtattc acgaaaagtt tatgtttgag
    13561 tggtgcgcaa acgtcagatt gaaaaaggat gaactatgaa atcgggccgc tttattggcg
    13621 ttatgtcagg caccagcctt gatggtgttg atgttgtgtt ggcgacaata gatgaacacc
    13681 gggtcgcaca gctggcaagc ttgagctggc cgatcccggt gtctctgaaa caggctgtac
    13741 tggatatttg ccagggccag cagcttacac tttcgcagtt tggacagctt gatactcaac
    13801 tcgggcgact ttttgctgat gcggtcaatg ccttgcttaa ggaacaaaac ctgcaggcga
    13861 gagatatagt tgcgatcggc tgtcacggtc aaaccgtctg gcatgaaccg acgggcgtgg
    13921 caccacacac tttacagatt ggcgataaca atcaaattgt ggcacgcacc ggaattacgg
    13981 ttgtcggtga ttttcgccgt cgcgatattg ccttgggagg acaaggcgca ccgctggtac
    14041 ctgcgttcca tcatgccttg ctggctcacc caaccgagcg acgaatggtg ctcaatattg
    14101 gcggcatcgc caatctgtca ctgctcattc ctgggcagcc ggttggcggc tacgataccg
    14161 gtcctggtaa catgctgatg gatgcctgga tctggcgtca ggccggtaaa ccttacgata
    14221 aagatgccga gtgggcacgg gcgggtaaag ttattctccc actgctgcaa aatatgctca
    14281 gcgacccata tttctcgcaa cctgcaccga aaagcaccgg acgcgaatac tttaactacg
    14341 gctggctgga gcgccattta cgccattttc cgggtgttga tccccgtgat gttcaggcca
    14401 cactggcaga actcaccgcc gtgaccattt ctgaacaagt tttgttgagc ggtggctgcg
    14461 aacgattgat ggtatgtggt ggaggtagtc gtaatccgct actcatggcg cgtctggcgg
    14521 cattactgcc aggcacagaa gtcaccacca ccgatgccgt tggcattagt ggcgatgaca
    14581 tggaagcatt ggctttcgcc tggcttgcct ggcggacgct ggcgggatta ccaggaaatc
    14641 tgccttccgt cactggcgca agccaggaga cggtactggg ggctattttc cctgctaacc
    14701 cgtgatatca gagttaactg aatttttctt accgcgtctg ccgttacact tggaacgtta
    14761 gggagggcgt attgccctcc agaccaggaa agtcttcggg aaatgtctat gaaaaaactg
    14821 ttactgatct gtttgccggt gcttctcacc ggctgtagcg cgttcaatca actggttgag
    14881 cacatgcaaa ccgctacgct ggaataccag tgtgatgaaa aaccgttgac ggtcaaactg
    14941 aataatccgc gccaggaagt cagttttgtt tacgataatc aactactgca tctcaaacag
    15001 ggcatttcag cgtctggtgc acgttacact gacggaatct atgttttctg gtcgaaaggc
    15061 gatgaagcga ctgtctataa acgcgaccgc atcgtattga ataactgtca gttacaaaat
    15121 ccacagcgtt gagatttttc caggggcggc gcacaatagc gtcacccact gacaatccgt
    15181 aaagaaaacc atgtctgata acgacgaatt gcagcaaatc gcgcatctgc gccgtgaata
    15241 caccaaaggc gggttacgcc gtcgcgatct tcccgccgat ccattaaccc tttttgaacg
    15301 ttggctctct caggcgtgtg aagccaaact ggcagaccct accgcgatgg tggtcgctac
    15361 cgtggatgaa catgctcagc cttatcaacg catcgtttta ctcaaacatt acgacgaaaa
    15421 aggcatggtg ttttacacca acctcggtag ccgtaaagca catcaaattg aaaataatcc
    15481 gcgcgttagc ctgctgttcc cgtggcatac ccttgaacgc caggtgatgg tgatcggtaa
    15541 agcagaacga ctttcgactc tcgaagtgat gaaatatttt catagccgcc cgcgtgatag
    15601 ccagattggt gcatgggttt cgaagcagtc cagtcgcatt tctgcccgcg gtatccttga
    15661 aagtaaattc ctggagctga agcagaagtt tcaacagggc gaagtgccat tgccgagctt
    15721 ttggggcggt tttcgcgtca gccttgaaca gattgagttc tggcagggcg gtgagcatcg
    15781 cctgcatgac cgctttttgt accagcgaga aaatgatgcg tggaagattg atcgtcttgc
    15841 accctgaaaa gatgcaaaaa tcttgcttta atcgctggta ctcctgattc tggcacttta
    15901 ttctatgtct ctttcgcatc tggcgaaaag tcgtgtaccg gcaaaggtgc agtcgttata
    15961 tacatggaga ttttgatggc aagcagtaac ttgattaaac aattgcaaga gcgggggctg
    16021 gtagcccagg tgacggacga ggaagcgtta gcagagcgac tggcgcaagg cccgatcgcg
    16081 ctctattgcg gcttcgatcc taccgctgac agcttgcatt tggggcatct tgttccattg
    16141 ttatgcctga aacgcttcca acaggcgggc cacaagccgg ttgcgctggt aggcggcgcg
    16201 acgggtctga ttggcgaccc gagcttcaaa gctgccgagc gtaagctgaa caccgaagaa
    16261 actgttcagg agtgggtgga caaaatccgt aagcaggttg ccccgttcct cgatttcgac
    16321 tgtggagaaa actctgctat cgcggcgaac aactatgact ggttcggcaa tatgaatgtg
    16381 ctgaccttcc tgcgcgatat tggcaaacac ttctccgtta accagatgat caacaaagaa
    16441 gcggttaagc agcgtctcaa ccgtgaagat caggggattt cgttcactga gttttcctac
    16501 aacctgttgc agggttatga cttcgcctgt ctgaacaaac agtacggtgt ggtgctgcaa
    16561 attggtggtt ctgaccagtg gggtaacatc acttctggta tcgacctgac ccgtcgtctg
    16621 catcagaatc aggtgtttgg cctgaccgtt ccgctgatca ctaaagcaga tggcaccaaa
    16681 tttggtaaaa ctgaaggcgg cgcagtctgg ttggatccga agaaaaccag cccgtacaaa
    16741 ttctaccagt tctggatcaa cactgcggat gccgacgttt accgcttcct gaagttcttc
    16801 acctttatga gcattgaaga gatcaacgcc ctggaagaag aagataaaaa cagcggtaaa
    16861 gcaccgcgcg cccagtatgt actggcggag caggtgactc gtctggttca cggtgaagaa
    16921 ggtttacagg cggcaaaacg tattaccgaa tgcctgttca gcggttcttt gagtgcgctg
    16981 agtgaagcgg acttcgaaca gctggcgcag gacggcgtac cgatggttga gatggaaaag
    17041 ggcgcagacc tgatgcaggc gctggtcgat tctgaactgc aaccttcccg tggtcaggcg
    17101 cgtaaaacta tcgcctccaa tgccatcacc attaacggtg aaaaacagtc cgatcctgaa
    17161 tacttcttta aagaagaaga tcgtctgttt ggtcgtttta ccttactgcg tcgcggcaaa
    17221 aagaattact gtctgatttg ctggaaataa tgcattaagt ggaaaggggg agtgagaaat
    17281 cactccccct ggtttttata cagggaacat gatgaaaaat attctcgcta tccagtctca
    17341 cgttgtttat ggtcatgcgg gtaacagtgc ggcagagttt cctatgcgcc gcctgggcgc
    17401 gaacgtctgg ccgctgaaca ccgttcaatt ttctaatcac acccagtacg gcaaatggac
    17461 tggctgcgtg atgccgccca gccatttaac cgaaattgtg caaggcattg ccgccattga
    17521 taaattacac acctgtgatg ccgtgttaag tggctatctg ggatcggcgg agcagggtga
    17581 acatatcctc ggtatcgtcc gtcaggtgaa agccgcgaat ccgcaggcga aatatttttg
    17641 cgatccggta atgggtcatc cggaaaaagg ctgtatcgtt gcaccgggtg tcgcagagtt
    17701 tcatgtgcgg cacggtttgc ctgccagcga tatcattgcg ccgaatctgg ttgagctgga
    17761 aatactctgt gagcatgcgg taaataacgt cgaagaagcg gttctggcag cgcgcgaact
    17821 cattgcgcaa gggccacaaa ttgtgttggt taaacacctg gcgcgagctg gctacagccg
    17881 tgaccgtttt gaaatgctgc tggtcaccgc cgatgaagcc tggcatatca gccgtccgct
    17941 ggtggatttt ggtatgcgcc agccggtagg tgttggtgat gtgacgagcg gtttactgct
    18001 ggtgaaactg cttcaggggg caacgctgca ggaggcgctg gaacatgtga ccgctgcagt
    18061 ctacgaaatc atggtgacca ccaaagcaat gcaggaatat gagctgcaag tggtggctgc
    18121 tcaggatcgt attgccaaac cagaacatta cttcagcgca acaaagctct gaaatatctc
    18181 atttcggccc acaacgacct gtgggccgat ggctattact ttaagccttc cgctgacagt
    18241 gcgtcttgta cttccggacg ttcagccata cgttgcataa atgctgcaat gtgctctaac
    18301 ccttccagat tcagtttcac cgcgtatgcc cagcgcagaa ccgtaaacag ataggcatca
    18361 gcaattgtaa atctttgccc gcagatccag tgctcatcct tcagtgtctc gttcacatat
    18421 tgcagcttct tctccagctg cgcgcgaact gtcggtttgt actcttccgg tgtatcaggg
    18481 cgaaacagag gtgtgaaacc tttatgcagc tcggtggcga tgtaattcag ccattcgatg
    18541 gttttatagc gggaaatact gtttaccggt gccagcaact ggcggtcggg gacgctgtcg
    18601 gcaagatact gcataatcgc tacgccttcc gtcagcaaag taccgtcatc cagcagcaat
    18661 gcaggcacct gccccttagg gttaacggca aagtaatcgt caccgttttc gagacgtttt
    18721 ttcattaaat ccacactgac gagggtaaaa tcctttccgc tctcacgcag ggtgatatgg
    18781 gaagcgagag agcaggcacc cggtttgtag aacaatttca tcggtaactc cttttgtctg
    18841 tggtttaaag tatggtagtg cgttgctgaa caaaaaaaaa gccgctaacg aaaagttagc
    18901 ggcttgtaaa agagtttccc taaattttac gctacagcag ctttcgccgc tttgtctgca
    18961 gcgtcatcct gcgtcatacg gtgcagttta ggcgcggtca gcagcatcag tactgcaata
    19021 atggcagtag cgacaccaat ctgcaagaat acgcgaccat aaacttccag tgacatcagc
    19081 gggtcggtaa cgttatccgg cacagccatc atacccgcaa cataaccacc aatcaggttt
    19141 gcaccggcag tggtcaggaa ccagctaccc ataatgaagc ccatcagacg ctgcggaacg
    19201 agttgtgcaa ccattgccag acccagacca gagatcatca gttccccgat gctctgcagg
    19261 ccatagcttg cgaccagcca gcttacagac acgataccag cgtcagacgc gaatttcgca
    19321 cccagcggca gaatcaggaa cgcaccagaa cacatcacca tgccgattgc aaacttggtt
    19381 ggcatcggca gggtatcgcc catcttgtta tagatagcgg ccagaatcgg actaccgatg
    19441 atgatccaga acgggttcag tgcctgatac tgctcaggtt ctacggccag acccagaatg
    19501 gagtgctcaa cgttacgaat cgcaaagaag ttcagtgacg ttggcatctg gctgtacagc
    19561 acgaagaaga taatggcttc gagcatcagg atgaaggcaa cgatcatttt acgacgcgca
    19621 gcacctttca tcgcgaaggc ttctttaccg aagataacca cgataccgaa ggcaacaacg
    19681 cccagcgcca tacgcgcaac ttcctgattg tgcagcagcc aggtggcgat agcgatcagt
    19741 gccacaacac caataatggt cagtagcagg ttacggtagt tgataggctc gaagtctggt
    19801 tttgaaccgt actgtttaac ccagcgttgg cagaaggcga agttaacgat agtgatcagc
    19861 aggcctacaa cgctcaacgc aaacgcaaca ctccagccgt atttcgcggc cagccacggc
    19921 gtagcaatca tagagaagaa agagccgatg ttgacggaca tgtagtacat ggtgaatgca
    19981 ccgtccagac gcgggtcgtt tttctcatag catgtagaaa gcagagaaga cgggttagct
    20041 ttaaacaggc cgttaccgac cgcaatagcc gccataccca tataaacgat accggcgtcg
    20101 tgaccagacc aggcaaccag agcataacca atcgccagca caatagcgcc gagcataatt
    20161 acgcgtttag tacccagtac cttgtcacct aaccagccgc cgatagcgac cagaccataa
    20221 accagggcac taaaggaaga gaaaagggtg attgaatccg cttcagacat acccagttgt
    20281 ttaaccaggt aaacagccat aattccttgt aggccgtaat aaccaaaacg ttcccataac
    20341 tcaatcgaga agatgagata gaacgccttc ggttgtttga aagcgttcaa actgacgctt
    20401 tcagttggtt tttggtttgc agtggacact tttacctctt tattttacat cccatattaa
    20461 cgggggtgct ttctcgcgtt atgtctaaaa aacatacgcg caattgttat agtgggaggg
    20521 gaaacggcag gtaatgttca ctatcttgca ctttcagaca agtcctttgt aataatctgt
    20581 tacatataac tgaggcgggg aattcaacca ttccgggaaa tgttatccag cgttaaattt
    20641 ttcaaaaaac gtaacggcag attttttcac tgcactgaga ggggggtgat ggcttaacgg
    20701 cgatatgttc tgctatttag cgtttttact agtgagatag tccagtttct gaaaaatagc
    20761 cagtgtaatg ttttgtaggt caatatttgt tgcgtgtgta aatttaaatg attttaacct
    20821 gattcttgca atgtttttac attgcgacag catcgtgatc ttgatcacga atgaatagaa
    20881 aatttcgcta ttaaaaaaac aattaacctg catttttggt tatccgcaaa cggattacct
    20941 gatgataacg ctaagcaatg gcatcattca cgttaaaaag atgttttaaa agaggataaa
    21001 gaaaggttat caatggggta atcggtgtta ccccttttct tcagatgtca actttctctt
    21061 tgtattcaca aagatcttca ataatacaag agccacagcg gggcttgcgg gcaatgcagg
    21121 tataacgccc gtgcaggatc aaccaatggt ggcagtcgac tttaaactct gccggaacca
    21181 ctttcagtag cttttcttct acctgttcaa cgtttttccc cggcgcaaat tgagtacgat
    21241 tacaaacgcg gaaaatgtgc gtgtcgacag caatagtcgg ccagccgaat gcagtgttta
    21301 atacgacgtt ggctgtttta cgacctacgc cgggcagggc ttcaagcgca gcacgatctt
    21361 ccggaacctc gccattatgc tgctccagta agatacggca ggttttgatg atattttctg
    21421 ctttgctgtt ataaagccca atcgttttga tataggtttt aaccccttca acgcccagtt
    21481 caagcatcgc tgcaggcgta ttcgccaccg ggtagagttt cgccgtcgcc ttattaacac
    21541 tgacatcggt cgcctgagcg gaaagcagta cggcaatcag caattcaaaa ggcgaactga
    21601 aattaagctc ggtggtggga tgaggattgt tctcacgcag gcgagtgagg atctccaggc
    21661 gttttgcttt gttcatcaga cattccctgt ttcaccgttt ggcaatgcac gttcggcagc
    21721 tgcttcagta cggcgctttt tcattctttc atcaatcagg tattttcctg ccagcatcag
    21781 tcccaggcca ataaatgcac ctggtggcag catcgccagc aggaaagggg agtcggtgtg
    21841 gaaaatctcc acgcgtaata cttttgccca gctacctaac agcgcatctg caccgtcaaa
    21901 caatgtgcca ttgccgataa tttcgcgtag tgaacccagc acgaacatgg cgcaggttgc
    21961 gcccatacca attgaaaagc cgtccagtgc cgaaagcgcc ggaccttttt tggcggcgaa
    22021 ggcttcagcg cggcccacaa cgatacagtt agtgacaatc agcggaataa aaatccctaa
    22081 tgattgatac aggccaaagg cgtaggcgtt gatcagcatc tgtacagcgc tgaccaccga
    22141 ggcgatgatc atcacgtaaa tgggaatgcg gatctcggct ggcgtccagt gacgcagcgt
    22201 cgaaatggtc aggttggtca gcgtcagtac cagcgtagtc gcaagtccta aacccagagc
    22261 attagtggca gtggacgtga ccgccaacag aggacaaagg ccgagcaact ggaccagcgc
    22321 agagttgttt ttccacaacc cctgaacaat aacgtcttta atttcgctca cgctttattc
    22381 tccacaggca ggaagttgag aaagttgtgc cggtaacgtc tgagcgtaca atccggcgcg
    22441 ttttaccgca ttaaccaccg cgcggggagt aatcgtcgcg ccggtgaact ggtcgaaatc
    22501 accaccatct ttcttcaccg cccagtgcgc atcatccgca ccactgattt ttttacccgc
    22561 aaaatgggtg atccagtcag aaaggcgcag ttcgatttta tcgccaagcc ctggcgtttc
    22621 gtggtgctct gtcacgcgcg tgccaagtac cgtgccgtta aaatcggctc ccaccagcag
    22681 ctgaatcgca ccggaatagc catctggcgc ggttgcttcc agaacggcgg ctaccggttt
    22741 gtcatcctgt ttggcgatgt aaacccgatg ctcaccttta cctaactctg gcgcagttac
    22801 cagatagcaa ctctgtgcca gcgcattgtt atagcgttcg gctggcagca cctgatcaaa
    22861 taatgccttt tgttgcagac ttgcctgttc agcaatcgtc gttttggtca tctggttgat
    22921 ggccgcagtt aaccctgttg aacccgctgc aaatagcgct aacgtaatgc cgtgttttcg
    22981 gatagttttc agcatggttt accctttgcg atggccgtag acgcgcggac gcgtgtagta
    23041 atcgatcaga ggaaccgtga tgttcgccag caggacggca aaagccacgc cgtcaggata
    23101 gccgccgaaa ctgcggatca accagactaa taagcccgca agcgcgccga aaataagacg
    23161 accacgattg gtcgtagaag cggtaaccgg gtcagtcaaa ataaagaatg cgccgagcat
    23221 ggtcgcacca gacagcagat gaatttgcgg tgctgccagt gtttctggtg agaacaacca
    23281 gcccaacgtt gcgcataacg ccagcgttac taagaagctg aggggaatat gccagcgaat
    23341 cgctttctgc catagcaacc acaggccgcc agccagccag gcgagattta cccattgcca
    23401 accagcgccc gccagaatac cgctgtagat cggatattgc ataatctgtt caaccgaatg
    23461 accggcacgg acagaggttt taaatgtatc cagcggtgtc gcctgactaa tgccatcaat
    23521 acctaagtgt agtgtgttca tatcagcacc actggcggta tgcccgctga aaataacctg
    23581 tatggcgtcg ataaaaccag ggatgttgac cgcaatttca tgtggcggta accagctggt
    23641 catctgcacc gggaaggaga tcagtaagac cacataacca atcattgccg gattaaacgg
    23701 gttttgcccc agaccgccat acaactgttt agcgatgatc accgcaaaca ccgtacccag
    23761 cacgaccatc caccatggcg cgaggggggg aatacttacc gccagcaata agcctgtcag
    23821 caatgctgag ttatctttca acgttgcggc taccgactgc ttgcgtagtt tgagtacgag
    23881 agcttcggct aacagagtac taaccgatgc caacaggatc tgaacgagag taccccaacc
    23941 aaaaaaccac agttgcgctg cgattcctgg cacggctgcg agcaacacca acagcataat
    24001 gcgcgatgtc tggcgctggt tatgggtata aggggagcta gctattctga ataccattta
    24061 gtcctcgttt acaacctttt gctgggcggc ttttttggcc tgagcgcggg caatagccgc
    24121 ggcaactgcc gctttgcgcg gatcaacctg ttcttctggt tctgcgttag tctgttgctg
    24181 ttccagcttg cgcgctttgg cacgggcaat agcggcttcg acggcggctt tgcgcggatc
    24241 aacctgttct tcaggtaccg cattagcctg ttgctgttcc agcttgcgtg ctttggcgcg
    24301 tgcaatagcc gcttcgacgg cagctttgcg cggatcaacc tgttcttctg gctccgcatt
    24361 agcctgttgc tgttccagtt tgcgcgcttt ggctcgggca atagcggctt cgatggcggc
    24421 tttgcgcgga tcaacctgtt cttctggttc cgcattagcc tgttgctgtt ccagcttgcg
    24481 cgctttggca cgggcaatag cggcttcgac ggcggctttg cgcggatcga cctgttcttc
    24541 tggttccgca ttagcctgtt gctgttccag cttgcgcgct ttggcgcggg cgatagctgc
    24601 ttcaacggca gttttacgtg gatcagcaac ggttgctgcg tcgttagttt gctgcagttc
    24661 tgcctgtttc gctctggctt gcgctttacg ggcttcccgt gctgcaataa ttgcactgtt
    24721 atccgggcgt tcgcccgctt taatcacaat aggctgtgta gcctgggcct gtttctcttt
    24781 cacccgcgcc agagcggcag caatcgcatc tttatctttg gctgcaggtt gaacggctgc
    24841 gctcttatgt cgttcaaggc gagccgcttt ttcgcgctcc agacgagcct ggcgcgcttc
    24901 gaaacgcgct ttggcttctg cggcgcgctt ttcttcctga cgaatagccg caatttcagc
    24961 tttttcctga cggaaatatt gcaccagggg aatattgctc gggcaaaccc acgcgcaagc
    25021 cccacattca atgcaatcag caatgttatg cgtggtagct ttatcgtgtt gctgaccttt
    25081 gctgaaccag tacaactgtt gcggcaaaag atccgcaggg caggcgtcag cacaggcgct
    25141 acaccggatg cagctttgtt cttcctgtgg ttcgccaagt tcattggcag agggagccaa
    25201 cagacagttg gtaatcttta cgaccgggac atccagccat ggcaaggtaa agcccattag
    25261 cgggccaccc ataatcacca tttgatcggc agaggggcag aatcgggcat cattcaataa
    25321 atgacgcact ggcgtcccca gccgtgccca gacgttgccc gggcgagcga ttgcttcgcc
    25381 agtcagggtt acaacacgct cggtaatcgg ctcgccatca ataacggcac gtttcactgc
    25441 ataagcagtg ccgacgtttt gcattaatac gccgatatcg gatgaacgcc cgccatgtgg
    25501 aacctgcttc ccggtcagaa tgtaggttaa ttgtttagca ccgccagaag gatatttggt
    25561 tggaatcacc cgcagagaaa tatcgttaga gtccgccagc accgcgcgca gcatggaaat
    25621 cgcctgcggt ttgttatctt caatgccgat aagaatttcg cgtggctgca gaatatgcgc
    25681 aagaatgcga ataccctcta cgacctgagc cgcgcaatcc tgcatcaaac ggtcatcggc
    25741 ggtaatgtac ggctcgcact cagccgcgtt gataatcaac gtttcaatct tatctccgcc
    25801 accctgcaat ttaacgcctg tcgggaatcc tgcaccgccc agcccggcaa caccaaactg
    25861 atgtatgcgc tcgattaact cttcgcgact acgagtgcga taatcggccc agccgtcgcg
    25921 cgggatccag cagtcttcac catcggcatc aataatcacg cttaattcag ctaaagctga
    25981 aggatgagcc gtagagtggg gcgcaatagc cgtaacggta cccgaggtgg gcgcgtgaac
    26041 aggcagcatt ttgccgcgac cacgggtaag cggctggccg cgcaatactt tatcgccgac
    26101 gctaacgcac aactcacctt cagcgccaat atgctgtttc agtggaataa caaaacgctg
    26161 cgccagtggt acctggcgca ggggggtacc gttggactgg gttttcatct ccggtggatg
    26221 gatgccgccg ttgaaatccc agattttatt ttttctgaat gcagagaata acttaagcat
    26281 ggtgttccac gggaatgata cgcacgggaa tggtgttcag atcccatttc caggagtcag
    26341 gtgtttctgc gaccggttgc aacgagatgc agtgcgtcgg gcacggatca acacataaat
    26401 tgcagcccgt acagagatca ctcattaccg tatgcatggc acgggtagcg ccaacgatgg
    26461 cgtctaccgg acaagcctga atacatttag tgcagccaat acagttattt tcatcaataa
    26521 ccgccaccat ccgcgcaggc gttagctctt gcgcttcgcc atccagcggc tgcggctcga
    26581 cattaagcaa ctcggcaatt tttagcatca cagcttcgcc acctggggcg caacggttga
    26641 ttttttcacc gttacagctg atggcttccg cgtaggggcg acagccggga taaccgcact
    26701 gaccacactg gctctgcggt aagatttcgt caattttctc aacgaccgga tcgtcttcca
    26761 ccgcaaaacg gcgggaggca taacccagaa tggcgccaaa cgccaggccc agcaggctca
    26821 cggcggcaac ggcaatccag atagcattca ttacaacttc accaaaccac taaagcccat
    26881 aaaggccaga gacataagac ctgcggtaat taacgcaatg gcattaccgc gaaaaggtgc
    26941 cgggacatca gccacagcaa ggcgttcgcg gatggcggtg aagagcacca tcaccagcga
    27001 gaaaccgaca gcggcggaaa aaccgtacag cgccgactgc aagaaattgt gcccgagatt
    27061 gatattcagc aacgccacgc cgagcactgc acagttggtg gtgataagcg gcaaaaaaat
    27121 ccccagcaga cggtaaagca ccgggctggt tttgcgcacc accatctcgg tgaactgcac
    27181 gaccacagca atcaccagaa taaatgccag ggtgcgcagg taaatcagat taagtgggat
    27241 caaaatccac gtatcgataa gccaggcgca aatagacgcc agcgtcatca caaacgttgt
    27301 tgccagcccc atgcccatcg cggtttccag ttttttggaa acccccataa acggacagag
    27361 accgagaaac ttgaccagca caaagttatt gaccagtata gttccgacaa acagtaacag
    27421 gtagtcagtc atttttcggc ctgaaataaa aaagccgcct attatccgtt aatccagagc
    27481 aggcgacaac aggttaactg taaggttatt acggattcac aaacgtcgct tttacccgcg
    27541 acgagcgttt gaaataggag acgatcaatg cggttgccaa caaagtaaac agcaactggc
    27601 gaacggctat gccatcttcc acgggtgaaa aagcgaatgc ttttactgcc agcaatacgg
    27661 aaataagcag ccagataata tagtgtttag gaacacaacg ccgacgttta aagaaagcga
    27721 tggtcaacca cagtgtgtaa taccacatgg cgatagcggt aataaaagaa acgccccata
    27781 agatttgtgt cgtcagtgct tgtccgccga gcgtttgaaa tgtttgcgga gaagataacg
    27841 cagcggtata cagcaacaac gccagcgtcg tactcaacag agcgactaaa agccaggcca
    27901 acgggccaag caaccagcct ccaatacgtt gtggcgttgt ggtggtcata ggttctccag
    27961 aatagcgacg caaacaggca aatctaattt taggggcgtt attataaggc ttttataacc
    28021 gatcgctact ttctttattg gacatagtgc cagacggact tcggtacctg gccgaggtca
    28081 aacaaacgcc cgccagaaac cagctctgcg cgacggtgat cggcagcacg atacatattg
    28141 atcagttcct gatcgtccgt cagggtgtaa ttaagatggt cgtagagttt ttccagactt
    28201 tcgagtgaac tgattttgcg aaattttaat aagtagtcct gaacagtcat aaaaggtcca
    28261 taaaataatt aataccaaag gggtaggtat tattagtgat gataaaattt caccaaaagt
    28321 gaacgcttgt gttattacaa taataagaat gcgctgatgg caaatattca gggatgaaaa
    28381 actgctctga aaagagtaac gcgctttact atccctgaca atcaccaaca acatcgaaca
    28441 agataataaa ttcctggttt aatatccgac aagtgaaaac atgcaaccgg acgggcagca
    28501 tggcgctcta caagcgcaga gcttacttgt gttgtaccga agcactctgt tcaggtggct
    28561 gatagttgtc aatgtgactc gccacgccaa gaagaatgac tgaaacgaca agaacgatcc
    28621 aacctgttaa ttcaataaga cgattcatta cagcccacat ctctcttgat tgatccatta
    28681 acttcagggg gtaaatgtta cttagcaata atagctccag caagattttt actgaggttt
    28741 ttgcgatatt tagcttttgt cgttggaaaa ttcgctattt ttttgactta atattaaact
    28801 gttgagcgtg ggtaaagggt agtgtcaaat agcaatcata cttcaatgag aggcaatgac
    28861 atgagcgaca acatccgtgt tgggttgatt gggtatggtt atgcgagcaa aaccttccat
    28921 gcgcccctga ttgcgggcac gcccgggctg gaactggcgg taatctccag cagtgatgaa
    28981 acaaaagtaa aagccgactg gccaacggtt acggttgtct ctgagccgaa gcatctgttt
    29041 aacgatccca acatagacct gattgtcatt cctacaccca acgataccca tttcccgtta
    29101 gccaaagcgg cgcttgaggc gggtaaacat gtggtcgttg ataaaccctt taccgtgaca
    29161 ctgtcacaag cgcgagagct ggatgcgctg gcaaaaagcc tggggcgtgt gctgtctgta
    29221 ttccataacc gtcgttggga tagcgatttc ttgacgctaa aaggtttgct cgcggaaggc
    29281 gtgctgggtg aagttgctta ctttgagtct cattttgacc gcttccgtcc gcaggtgcgc
    29341 gatcgttggc gtgaacaggg cggcccaggc agcggtatct ggtacgattt agcaccgcat
    29401 cttcttgatc aggccattac gctatttggt ttaccggtca gcatgacggt agatttggca
    29461 cagttacggc ccggagcgca gtcgaccgat tatttccacg ccatcttgtc ctatccacag
    29521 cggcgagtca ttttacacgg taccatgctg gcagccgctg agtcagcacg gtatatcgtg
    29581 catggatccc gaggcagtta tgtgaaatat ggcctcgatc cacaggaaga acgtctgaaa
    29641 aatggcgagc gtctgccgca ggaagactgg ggctacgata tgcgtgatgg cgtacttacc
    29701 cgagtggaag gtgaggaacg tgtcgaagaa acgctgttga cggtacctgg gaattatccg
    29761 gcttactatg cggctattcg tgatgcgtta aatggcgatg gtgaaaatcc ggttccggca
    29821 agccaggcaa tccaggtaat ggagttgatt gagctgggca tcgaatccgc caaacatcgc
    29881 gcgactttgt gccttgcatg aaaaatggat ggtgcaattt gcaccatcca ttttgttact
    29941 tcgcggcgac tttttctcgc agtgcgcgtt tttcctcagc gctgaggaaa gccatttcca
    30001 gaccattaat ctgtgcctgg cggatttgct cgcgggataa cccagcagct ggcgcggcaa
    30061 cggtatattc gtgaatgata tccactccct gtacgccggg atcgtcagtg ttaatgccgg
    30121 cacgaatgcc atgctcaagg aacgttttca gcggatgtgc agccagctct gctacggtgc
    30181 tggtctgaat attggaggtc agacaggatt caataccaat ttgttgctcg gcgagaaaat
    30241 ccatcagcgc ccgatcttca atggctttta cgccatgtcc aatacgctcc gcacccagtt
    30301 cacgaatcgc ctgccagatg ctttccggcc cggcagcttc gcctgcatgg acggtaatat
    30361 gccagcccgc atcacgcgca aggttgaagt gagaaaggaa cagacttccc gggaaaccaa
    30421 gttcatcacc ggctaaatca agggcggtaa tctggtcacg gtgggctaaa aaggcctcca
    30481 gctcttgctg acaggcggct tcgccgaagg ttcggctcat aatgccgata agcttcgcct
    30541 gcacaccaaa agtgcggcaa ccttcacgta cgccatcgat caccgcttcg acaacacccg
    30601 ctacaggcag cttatgtgcc attgccatgt agcctggtga aaaacgcagc tcgacatagt
    30661 gcaggccgtt acgggctgca tcttcaatgt tttcaaatgc cacgcggcgg caggcatcaa
    30721 gagaggcgag aactttaacg ccccagtcaa gtttggtcag aaagctcacc agatcgggtt
    30781 cgttggcaat gacctgaacg tggggaatca gtgtttccag ggattgtgca ggaagcgaga
    30841 tattatactg gcggccaagt tcaagaatgg tctggggacg aatgttgcca tcaaggtggc
    30901 gatggatatc agttaatggc agggtggtat caatcatggt cgcactcttt ttctggatat
    30961 aaaagtgcgc accattataa aaacaaagca gggtaaaaat ccacgattgc gcaacgattt
    31021 ttacgttgcg caattggggt taacgaacag cgcggatggc gttaattaat ccagccacac
    31081 ctttttccag tttcgaacgt gggcagccgg cattgagacg gacaaaacca cgaccttctt
    31141 caccgtaggt ataccccggc atgatcgcga ctttttcttg ttcgataagt gctttttgca
    31201 acgcgttgtc gtcaatattc aacggacgta aatcaagcca tgccagataa gtggattgtg
    31261 ggatctgcca gttgagttca ggaaacgcgg cgttcatttt atctgcgata tacgtcaggt
    31321 tatctttcag atagatgcgt aaggcatcca gccacggcgc gccttgctga taggcggcga
    31381 tatgggcagt taacgccagt accgaagggg aagaaagccc atcacggcct ttcagtgccg
    31441 ataaataggc atcgcggcta ctgctatttt ctataatccc gtaagcaccg gtcagggcgg
    31501 gaatattgaa acttttcgag cccgacgtta gcaacgccca gtctccgcga gccacattac
    31561 tccagggaat atgcggctgc tcgccccaaa ccatatccat atggatttca tcggaaataa
    31621 cccgcacacc atgacgctcg cacaggtcag ccatgatctc cagctcatcg cacgtccaca
    31681 ctttcccggt aggattctgt gggctacaca ggagcataat tttacattct ggtttcgcca
    31741 acacggcttc caacttgccc atattgcaaa accaaccatc agcctgcttc tctaaagcaa
    31801 cgggcattac tgtgcgctgg ttaccttcaa tggccttgta aaatgcgtca taggcgggtg
    31861 tgtggatcac cacgccttca cctgtttcag accactgacg aatcagttct gaaaccatat
    31921 agatgacaga agggccatac accaccgtct gagaatcgat ggcggtgtaa tgctgggtgg
    31981 aaaaccagtg ggcaatagca gcgagaaact catcgttttt ccagcggctg tagccaaata
    32041 cgccgtgcat caggcgctga ttcagcgcct ctataatgca gggggcagtg gcaaaatcca
    32101 tgtctgaaat cgtgaacggt aacaggtcag cagtgccgaa acggtcagcg acataatccc
    32161 actgtgtaca ccatgtgcca tgacgatcca cgacctttga aaaatcgaac atatcttatc
    32221 cttatgcctg gacagtatgc atcagaccgg ccatttcatc ttttactgac tgaacttgtg
    32281 gcccgataac aacctgcagg ttatgttgat taagttgtac tacgccaatt gcccgattgt
    32341 ccttcagtgc ctgcacatta acaagcgaca tatctttcac agacaaacgc agacgggtaa
    32401 tgcagttatc gaggctgaca atattgtcgg caccgcctaa tgcttcgagg attgcaggaa
    32461 cgttgtaacc tgatttaccc ggcgcagcgg caacggcttt ttcgattgag ctggcaactt
    32521 cgctatcgcg ccccggggtt ttgagattga agcgggtgat agcgaaacgg aagatggcgt
    32581 agtaaacgac aaaccagatt gccgccacca ctggcaccat gtaccacttg gttgacagac
    32641 catgcaaaat accgaacacc acgaagtcga tgatattgcc gtcggtatta ccgatggtga
    32701 cgccgagcac agacatgacg gtgaagccga ggccggttaa cagcgcgtgg atgacataca
    32761 gaactggcgc tacgaacagg aacaggaatt ccagcggttc ggtagtgccg ccaacgacgc
    32821 aggcgatcag gccagaaatc agcagacctt taattttatg gcgattttcc gggcgcgcgc
    32881 agtgatacat agctaacgct gcagctggca gaccgccgag aaacgcaggc attttacctt
    32941 gcgaaaggaa acgcgtggcg ctttcagaaa aaccgtgagt ggtcgggcaa ctcaattgcg
    33001 tctggaagat ggtcagtgcg ccgctgacgg tttgaccgca gacttcctgc gtgccgcctg
    33061 cgtcggtaaa gcgaattaat gccaccagaa tgtgatgcag accaaacggc aacagcagac
    33121 gttcaccggt accaaacagc atcggtccga aatcacccgc gctgtttatc atatggccca
    33181 agccgctaat acccatggcg aaaatcggcc agactaatgg aatcaccagg ccgacaaggc
    33241 ccatcaccag cgaggagata attggtacga agcgcgtacc gccgaagaat gccagcgcat
    33301 ccggcaggcg gatattatgg aaacgctcat gcagcatcca gacgataata ccggcgatca
    33361 ccgcaccgag gatcccggta tcgatcgact ggatcccaag aatgctctgg atgttattgg
    33421 ctttcagaac cgcggcatcc gtggttggca gaatgccttt attggtcaac cagaagttta
    33481 ccgcgaggtt cattaccgca taaccgacga agccagcgaa tgccgctacg cctttatttt
    33541 cgcgtgccag gcccagcggg atggcgatac agaacatgac aggcaggaaa ctaaaagcaa
    33601 acgagccaat cttactcatc caggtaaaga tagcctgcaa cacggggttg cccaggaccg
    33661 ggatcagggt tatgacatca tggctgctaa gagaactacc aatgccgagc ataatgccgc
    33721 agaacgacaa taatgccacg ggtaacatga aggttttgcc taactgctgg aagaactccc
    33781 acagcgtgac tttcggtgct gttttcgccg tcataaaacg actcctcgta gagaacaatc
    33841 tggattcagt aaattgcgcg agaagataaa acgttttatc aaattttagt gaggcataaa
    33901 tcacattacg caacgataat agcgggtata agataaataa aaggtaaaac gttttatctg
    33961 tcacataatc agggagtagg tcatctgcat ggctaccgcc aaaaaaataa ccattcatga
    34021 tgttgcgctg gctgcgggcg tgtcggtaag taccgtttcg ctggtgctta gtggcaaagg
    34081 gcgaatctct accgccacag gagaacgcgt taacgccgcc attgaagagc tgggatttgt
    34141 gcgcaatcgc caggcgtcgg cgctgcgcgg cgggcaaagc ggcgtcattg gtttgatcgt
    34201 ccgtgattta tctgcgccgt tttacgccga attgacggcc ggattgacgg aagctctgga
    34261 agcgcaggga cggatggttt ttttgcttca cggcggtaaa gacggcgagc agctggcaca
    34321 gcggttttca ctgttactga atcagggggt cgatggtgtg gtaattgccg gggctgcagg
    34381 aagcagcgat gacctgcgac ggatggcaga agaaaaagct atcccggtga ttttcgcttc
    34441 ccgtgccagt tatcttgatg atgttgatac ggttcgcccg gacaacatgc aggctgcaca
    34501 gttgttgacg gagcatctca ttcgcaatgg gcatcagcgg atcgcctggc tgggagggca
    34561 aagttcctca ttaacccggg cagaacgggt gggaggctat tgtgcaactc tactaaaatt
    34621 tggtctgccg tttcacagcg attgggtgct ggagtgcaca tccagccaga agcaagctgc
    34681 ggaagctatc acggcgcttt tacgtcataa cccgaccatc agtgctgtgg tttgctataa
    34741 cgaaactatt gcgatggggg catggtttgg tttgctgaaa gcagggcggc aaagcgggga
    34801 aagcggagtc gatcgttact ttgagcaaca agtttcgctg gcggcattta ccgatgcgac
    34861 accaaccaca cttgatgata tacccgttac ctgggccagc acgcctgcgc gggaacttgg
    34921 taccacactt gcggatcgca tgatgcaaaa aatcacccat gaagagacgc attcacgcaa
    34981 tcttattatt cccgcccggc tcattgcagc gaaataatcc tctctttatc tgctatacct
    35041 ggtagtgtcc tttcctcaag gttaatgata aaaaatgtgg cacacagg
//
LOCUS       DADMJE010000023        35012 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.023, whole genome shotgun sequence.
ACCESSION   DADMJE010000023 DADMJE010000000
VERSION     DADMJE010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 35012)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35012)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35012
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.023"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            44..1270
                     /gene="dsdA"
                     /locus_tag="JN001_001023"
     CDS             44..1270
                     /gene="dsdA"
                     /locus_tag="JN001_001023"
                     /EC_number="4.3.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001051648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine ammonia-lyase"
                     /protein_id="HAY9052329.1"
                     /translation="MAEGLPYVGLTEQDVQDAHARLSRFAPYLAKAFAETAATGGIIE
                     SELVAIPAMQKRLEKEYQQPISGQLLLKKDSHLPISSSIKARGGIYEVLAHAEKLALE
                     AGLLTLDDDYSKLLSPEFKQFFSQYSIAVGSTGNLGLSIGIMSARIGFKVTVHMSADA
                     RAWKKAKLRSHGVTVVEYEQDYGVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSVAG
                     QRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPTHSP
                     CMLLGVHTGLHDQISVQDIGIDNLTAADGLAVGRASGFVGRAMVRLLDGFYTLSDQTM
                     YDMLGWLAQEEGIRLEPSALAGMAGPQRVCASVSYQQMHGFSAEQLRNTTHLVWATGG
                     GMVPEEEMNQYLAKGR"
     gene            complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JN001_001024"
     CDS             complement(1378..2916)
                     /gene="emrY"
                     /locus_tag="JN001_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter permease
                     subunit EmrY"
                     /protein_id="HAY9052330.1"
                     /translation="MAITKSTPAPLTGGTLWCVTIALSLATFMQMLDSTISNVAIPTI
                     SGFLGASTDEGTWVITSFGVANAIAIPVTGRLAQRIGELRLFLLSVTFFSLSSLMCSL
                     STNLDVLIFFRVVQGLMAGPLIPLSQSLLLRNYPPEKRTFALALWSMTVIIAPICGPI
                     LGGYICDNFSWGWIFLINVPMGIIVLTLCLTLLKGRETETSPVKMNLPGLTLLVLGVG
                     GLQIMLDKGRDLDWFNSSTIIILTVVSVISLISLVIWESTSENPILDLSLFKSRNFTI
                     GIVSITCAYLFYSGAIVLMPQLLQETMGYNAIWAGLAYAPIGIMPLLISPLIGRYGNK
                     IDMRLLVTFSFLMYAVCYYWRSVTFMPTIDFTGIILPQFFQGFAVACFFLPLTTISFS
                     GLPDNKFANASSMSNFFRTLSGSVGTSLTMTLWGRRESLHHSQLTATIDQFNPVFNSS
                     SQIMDKYYGSLSGVLNEINNEITQQSLSISANEIFRMAAIAFILLTVLVWFAKPPFTA
                     KGVG"
     gene            complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JN001_001025"
     CDS             complement(2916..4079)
                     /gene="emrK"
                     /locus_tag="JN001_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter periplasmic
                     adaptor subunit EmrK"
                     /protein_id="HAY9052331.1"
                     /translation="MEQINSNKKHSNRRKYFSLLAVVLFIAFSGAYVYWSMELEDMIS
                     TDDAYVTGNADPISAQVSGSVTVVNHKDTNYVRQGDILVSLDKTDATIALNKAKNNLA
                     NIVRQTNKLYLQDKQYSAEVASARIQYQQSLEDYNRRVPLAKQGVISKETLEHTKDTL
                     ISSKAALNAAIQAYKANKALVMNTPLNRQPQVVEAADATKEAWLALKRTDIKSPVTGY
                     IAQRSVQVGETVSPGQSLMAVVPARQMWVNANFKETQLTDVRIGQSVNIISDLYGENV
                     VFHGRVTGINMGTGNAFSLLPAQNATGNWIKIVQRVPVEVSLDPKELMEHPLRIGLSM
                     TATIDTKNEDIAEMPELASTVTSMPAYTSKALVIDTSPIEKEISNIISHNGQL"
     gene            4495..5109
                     /gene="evgA"
                     /locus_tag="JN001_001026"
     CDS             4495..5109
                     /gene="evgA"
                     /locus_tag="JN001_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system DNA-binding response
                     regulator EvgA"
                     /protein_id="HAY9052332.1"
                     /translation="MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETL
                     KPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVSAKNDHFYGKHCADAGANGFVSK
                     KEGMNNIIAAIEAAKNGYCYFPFSLNRFVGSLTSDQQKLDSLSKQEISVMRYILDGKD
                     NNDIAEKMFISNKTVSTYKSRLMEKLECKSLMDLYTFAQRNKIG"
     gene            5114..8707
                     /gene="evgS"
                     /locus_tag="JN001_001027"
     CDS             5114..8707
                     /gene="evgS"
                     /locus_tag="JN001_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-sensing system histidine kinase EvgS"
                     /protein_id="HAY9052333.1"
                     /translation="MKFLPYFFLLCCGLWSTISFADEDYIEYRGISSNNRVTLDPVRL
                     SNKELRWLASKKNLVIAVHKSQTATLLHTDSQQRVRGINADYLNLLKRALNIKLTLRE
                     YADHQKAMDALEEGEVDIVLSHLVASPPLNDDIAATKPLIITFPALVTTLHDSMRPLT
                     SSKPVNIARVANYPPDEVIHQSFPKATIISFTNLYQALASVSAGQNDYFIGSNIITSS
                     MISRYFTHSLNVVKYYNSPRQYNFFLTRKESVVLNEVLNRFVDALTNEVRYEVSQNWL
                     DTGNLAFLNKPLELTEHEKQWIKQHPDLKVLENPYSPPYSMTDENGSVRGVMGDILNI
                     ITLQTGLNFSPITVSHNIHAGTQLNPGGWDIIPGAIYSEDRENNVSFAEAFITTPYVF
                     VMQKAPDSEQTLKKGMKVAIPYYYELHSQLKEMYPEVEWIKVDNASAAFHKVKEGELD
                     ALVATQLNSRYMIDHYYPNELYHFLIPGVPNASLSFAFPRGEPELKDIINKALNAIPP
                     SEVLRLTEKWIKMPNVTIDTWDLYSEQFYIVTTLSVLLVGSSLLWGFYLLRSVRRRKV
                     IQGDLENQISFRKALSDSLPNPTYVVNWQGNVISHNSAFEHYFTADYYKNAMLPLENS
                     DSPFKDVFSNAHEVTAETKENRTIYTQVFEIDNGIEKRCINHWHTLCNLPASDHAVYI
                     CGWQDITETRDLIHALEVERNKAINATVAKSQFLATMSHEIRTPISSIMGFLELLSGS
                     GLSKEQRVEAISLAYATGQSLLGLIGEILDVDKIESGNYQLQPQWVDIPTLVQNTCHS
                     FGAIAASKSIALSCSSTFPDHYLVKIDPQAFKQVLSNLLSNALKFTTEGAVKITTSLV
                     HIDDNHAVIKMTIMDSGSGLSQEEQQQLFKRYSQTSAGRQQTGSGLGLMICKELIKNM
                     QGDLSLESHPGIGTTFTITIPVEISQQVATVEAKAEHPITLPEKLSILIADDHPTNRL
                     LLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSS
                     LPIWGLTANAQANEREKGLSCGMNLCLFKPLTLDVLKTHLSQLHQVAHIAPQYRHLDI
                     EALKNNTANDLQLMQEILITFQHETHKDLPAAFQALEAGDNRTFHQCIHRIHGAANIL
                     NLQKLINISHQLEITPVSDDSKPEILQLLNSVKEHIAELDQEIAVFCQKND"
     gene            complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JN001_001028"
     CDS             complement(8763..9908)
                     /gene="yfdE"
                     /locus_tag="JN001_001028"
                     /EC_number="2.8.3.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416872.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA:oxalate CoA-transferase"
                     /protein_id="HAY9052334.1"
                     /translation="MTNNESKGPFEGLLVIDMTHVLNGPFGTQLLCNMGARVIKVEPP
                     GHGDDTRTFGPYVDGQSLYYSFINHGKESVVLDLKNDYDKSIFINMLKQADVLAENFR
                     PGTMEKLGFSWETLQEINPRLIYASSSGFGHTGPLKDAPAYDTIIQAMSGIMMETGYP
                     DAPPVRVGTSLADLCGGVYLFSGIVSALYGREKSQRGAHVDIAMFDATLSFLEHGLMA
                     YIATGKSPQRLGNRHPYMAPFDVFNTQDKPITICCGNDKLFSALCQALELTELVNDPR
                     FSSNILRVQNQAILKQYIERTLKTQAAEVWLARIHEVGVPVAPLLSVAEAIKLPQTQA
                     RNMLIEAGGIMMPGNPIKISGCADPHVMPGAATLDQHGEQIRQEFSS"
     gene            complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JN001_001029"
     CDS             complement(9982..10926)
                     /gene="yfdV"
                     /locus_tag="JN001_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter YfdV"
                     /protein_id="HAY9052335.1"
                     /translation="MLTFFIGDLLPIIVIMLLGYFSGRRETFSEDQARAFNKLVLNYA
                     LPAALFVSITRANREMIFADTRLTLVSLVVIVGCFFFSWFGCYKFFKRTHAEAAVCAL
                     IAGSPTIGFLGFAVLDPIYGDSVSTGLVVAIISIIVNAITIPIGLYLLNPSSGADGKK
                     NSNLSALISAAKEPVVWAPVLATILVLVGVKIPAAWDPTFNLIAKANSGVAVFAAGLT
                     LAAHKFEFSAEIVYNTFLKLILMPLALLLVGMACHLNSEHLQMMVLAGALPPAFSGII
                     IASRFNVYTRTGTASLAVSVLGFVVTAPLWIYVSRLVS"
     gene            complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JN001_001030"
     CDS             complement(10996..12690)
                     /gene="oxc"
                     /locus_tag="JN001_001030"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HAY9052336.1"
                     /translation="MSDQLQMTDGMHIIVEALKQNNIDTIYGVVGIPVTDMARHAQAE
                     GIRYIGFRHEQSAGYAAAASGFLTQKPGICLTVSAPGFLNGLTALANATVNGFPMIMI
                     SGSSDRAIVDLQQGDYEELDQMNAAKPYAKAAFRVNQPQDLGIALARAIRVSVSGRPG
                     GVYLDLPANVLAATMEKDEALTTIVKVENPSPALLPCPKSVTSAISLLAKAERPLIIL
                     GKGAAYSQADEQLREFIESAQIPFLPMSMAKGILEDTHPLSAAAARSFALANADVVML
                     VGARLNWLLAHGKKGWAADTQFIQLDIEPQEIDSNRPIAVPVIGDIASSMQGMLAELK
                     QNTFTTPLVWRDILNIHKQQNAQKMHEKLSTDTQPLNYFNALSSVRDVLRENQDIYLV
                     NEGANTLDNARNIIDMYKPRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIEGDSAF
                     GFSGMEIETICRYNLPVTIVIFNNGGIYRGDGVDLSGAGAPSPTDLLHHARYDKLMDA
                     FRGVGYNVTTTDELRHALTTGIQSRKPTIINVVIDPAAGTESGHITKLNPKQVAGN"
     gene            complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JN001_001031"
     CDS             complement(12744..13994)
                     /gene="frc"
                     /locus_tag="JN001_001031"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HAY9052337.1"
                     /translation="MSTPLQGIKVLDFTGVQSGPSCTQMLAWFGADVIKIERPGVGDV
                     TRHQLRDIPDIDALYFTMLNSNKRSIELNTKTAEGKEVMEKLIREADILVENFHPGAI
                     DHMGFTWEHIQEINPRLIFGSIKGFDECSPYVNVKAYENVAQAAGGAASTTGFWDGPP
                     LVSAAALGDSNTGMHLLIGLLAALLHREKTGRGQRVTMSMQDAVLNLCRVKLRDQQRL
                     DKLGYLEEYPQYPNGTFGDAVPRGGNAGGGGQPGWILKCKGWETDPNAYIYFTIQEQN
                     WENTCKAIGKPEWITDPAYSTAHARQPHIFDIFAEIEKYTVTIDKHEAVAYLTQFDIP
                     CAPVLSMKEISLDPSLRQSGSVVEVEQPLRGKYLTVGCPMKFSAFTPDIKAAPLLGEH
                     TAAVLQELGYSDDEIAAMKQNHAI"
     gene            complement(14507..15139)
                     /locus_tag="JN001_001032"
     CDS             complement(14507..15139)
                     /locus_tag="JN001_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdX family protein"
                     /protein_id="HAY9052338.1"
                     /translation="MKRLIMATMVTAILASSTVWAADNAPVAAQQQTQQVQQTQKTAA
                     AERISEQGLYAMRDVQVARLALFHGDPEKAKELTNEASALLSDDSTEWAKFAKPGKKT
                     NLNDDQYIVINASVGISESYVATPEKEAAIKIANEKMAKGDKKGAMEELRLAGVGVME
                     NQYLMPLKQTRNALADAQKLLDKKQYYEANLALKGAEDGIIVDSEALFVN"
     gene            15435..15710
                     /locus_tag="JN001_001033"
     CDS             15435..15710
                     /locus_tag="JN001_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052339.1"
                     /translation="MKVNLILFSLFLLVYIMACNVFAFSISGGVSERSYKETEKTSAM
                     TTTHSTKLQPSQAILFKMREDAPPLNLTEEITPTYPTKANYLIHPVR"
     gene            complement(15787..16029)
                     /locus_tag="JN001_001034"
     CDS             complement(15787..16029)
                     /locus_tag="JN001_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfdY family protein"
                     /protein_id="HAY9052340.1"
                     /translation="MIYLWMFLALCIVCVSGYIGQVLNVVSAVSSFFGMVILAALIYY
                     FTMWLTGGNELVTEIFMFLAPACGLMIRFMVGYGRR"
     gene            16382..17302
                     /gene="lpxP"
                     /locus_tag="JN001_001035"
     CDS             16382..17302
                     /gene="lpxP"
                     /locus_tag="JN001_001035"
                     /EC_number="2.3.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311285.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kdo(2)-lipid IV(A) palmitoleoyltransferase"
                     /protein_id="HAY9052341.1"
                     /translation="MFPQCKFSREFLHPRYWLTWFGLGVLWLWVQLPYPVLCFLGTRI
                     GAMARPFLKRRESIARKNLELCFPQHSAEEREKMIAENFRSLGMALVETGMAWFWPDS
                     RVRKWFDVEGLDNLKRAQMQNRGVMVVGVHFMSLELGGRVMGLCQPMMATYRPHNNQL
                     MEWVQTRGRMRSNKAMIGRNNLRGIVGALKKGEAVWFAPDQDYGRKGSSFAPFFAVEN
                     VATTNGTYVLSRLSGAAMLTVTMVRKADYSGYRLFITPEMEGYPTDENQAAAYMNKII
                     EKEIMRAPEQYLWIHCRFKTRPVGESSLYI"
     gene            17658..17729
                     /gene="ypdK"
                     /locus_tag="JN001_001036"
     CDS             17658..17729
                     /gene="ypdK"
                     /locus_tag="JN001_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_077777854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein YpdK"
                     /protein_id="HAY9052342.1"
                     /translation="MKYFFMGISFMVIVWAGTFALMI"
     gene            complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JN001_001037"
     CDS             complement(17794..19032)
                     /gene="alaC"
                     /locus_tag="JN001_001037"
                     /EC_number="2.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine transaminase"
                     /protein_id="HAY9052343.1"
                     /translation="MADTRPERRFTRIDRLPPYVFNITAELKMAARRRGEDIIDFSMG
                     NPDGATPPHIVEKLCTVAQRQDTHGYSTSRGIPRLRRAISRWYQDRYDVEIDPESEAI
                     VTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNE
                     LERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVY
                     DGWKAPSIMQVSGARDVAVEFFTLSKSYNMAGWRIGFMVGNKTLVSALARIKSYHDYG
                     TFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEAGWIVEMPKASMYVWAKI
                     PEPYAAMGSLVFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKA
                     MFRADGLLPASSKHIHENAE"
     gene            19409..21106
                     /locus_tag="JN001_001038"
     CDS             19409..21106
                     /locus_tag="JN001_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HAY9052344.1"
                     /translation="MHEIFNMLLAVFDRAALMLICLFFLIRIRLFRELLHKSAHSPKE
                     LLAVTAIFSLFALFSTWSGVPVEGSLVNVRIIAVMSGGILFGPWVGIITGVIAGIHRY
                     LIDIGGVTAIPCFITSILAGCISGWINLKIPKAQRWRVGILGGMLCETLTMILVIVWA
                     PTTALGIDIVSKIGIPMILGSVCIGFIVLLVQSVEGEKEASAARQAKLALDIANKTLP
                     LFRHVNSESLRKVCEIIRDDIHADAVAITNTDHVLAYVGVGEHNYQNGDDFISPTTRQ
                     AMNYGKIIIKNNDEAHRTPEIHSMLVIPLWEKGVVTGTLKIYYCHAHQITSSLQEMAV
                     GLSQIISTQLEVSRAEQLREMANKAELRALQSKINPHFLFNALNAISSSIRLNPDTAR
                     QLIFNLSRYLRYNIELKDDEQIDIKKELYQIKDYIAIEQARFGDKLTVIYDIDEEVNC
                     CIPSLLIQPLVENAIVHGIQPCKGKGVVTISVAECGNRVRIAVRDTGHGIDPKVIERV
                     EANEMPGNKIGLLNVHHRVKLLYGEGLHIRRLEPGTEIAFYIPNQRTPVASQATLLL"
     gene            21121..21855
                     /locus_tag="JN001_001039"
     CDS             21121..21855
                     /locus_tag="JN001_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY9052345.1"
                     /translation="MKVIIVEDEFLAQQELSWLIKEHSQMEIVGTFDDGLDVLKFLQH
                     NRVDAIFLDINIPSLDGVLLAQNISQFAHKPFIVFITAWKEHAVEAFELEAFDYILKP
                     YQESRITGMLQKLEAAWQQQQTSSTPAATVTRENDTINLVKDERIIVTPINDIYYAEA
                     HEKMTFVYTRRESYVMPMNITEFCSKLPPSHFFRCHRSFCVNLNKIREIEPWFNNTYI
                     LRLKDLDFEVPVSRSKVKEFRQLMHL"
     gene            21868..22725
                     /locus_tag="JN001_001040"
     CDS             21868..22725
                     /locus_tag="JN001_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9052346.1"
                     /translation="MKAPGLPADQQFFADLFSGLVLNSQLLGRVWFASQPASLPVGSL
                     CIDFPRLDIVLRGEYGNLLEAKQQRMVEGEMLFIPARAANLPINNKPVMLLSLVFAPT
                     WLGLSFYDSRTTSLLHPARQIQLPSLQRGEGEAMLTALTHLSRSPLEQNIIQPLVLSL
                     LHLCRNVVNMPPGNSQPRGDFLYHSICNWVQDNYTQPLTRESVAQFFNITPNHLSKLF
                     AQHGTMRFIEYVRWVRMAKARMILQKYHLSIHEVAQRCGFPDSDYFCRVFRRQFGLTP
                     GEYSARFQG"
     gene            complement(22728..25223)
                     /gene="ptsP"
                     /locus_tag="JN001_001041"
     CDS             complement(22728..25223)
                     /gene="ptsP"
                     /locus_tag="JN001_001041"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY9052347.1"
                     /translation="MLTIQFLCPLPNGLHARPAWELKEQCSQWQSEITFINHRQNAKA
                     DAKSSLALIGTGTLFNDSCSLNISGSDEEQAQRVLEEYIQVRFIDSDSIQPTQAELTA
                     HPLPRSLSRLNPDLLYGNVLASSVGVGTLTLLQSDSLDSYRAIPASAQDSTRLEHSLA
                     TLAEQLNQQLRESDGESKTILSAHLSLIQDDEFAGNIRRLMTEQHQGLGAAIISNMEQ
                     VCAKLSASASDYLRERVSDIRDISEQLLHITWPELKPRNNLVLEKPTILVAEDLTPSQ
                     FLSLDLKNLAGMILEKTGRTSHTLILARASAIPVLSGLPLDAIARYAGQPAVLDAQCG
                     VLAINPNDAVSGYYQVAQTLADKRQKQQAQAAAQLAYSRDNKRIDIAANIGTALEAPG
                     AFANGAEGVGLFRTEMLYMDRDSAPDEQEQFEAYQQVLLAAGDKPIIFRTMDIGGDKS
                     IPYLNIPQEENPFLGYRAVRIYPEFAGLFRTQLRAILRAASFGNAQLMIPMVHSLDQI
                     LWVKGEIQKAIVELKRDGLRHAETITLGIMVEVPSVCYIIDHFCDEVDFFSIGSNDMT
                     QYLYAVDRNNPRVSPLYNPITPSFLRMLQQIVTTAHQRGKWVGICGELGGESRYLPLL
                     LGLGLDELSMSSPRIPAVKSQLRQLDSEACRELARQACECRSAQEIEALLTAFTPEED
                     VRPLLALENIFVDQDFSNKEQAIQFLCGNLGVNGRTEHPFELEEDVWQREEIVTTGVG
                     FGVAIPHTKSQWIRHSSISIARLAKPIDWQSEMGEVELVIMLTLGANEGMNHVKVFSQ
                     LARKLVNKNFRQSLFAAQDAQSILTLLETELTF"
     gene            complement(25248..26285)
                     /gene="ypdE"
                     /locus_tag="JN001_001042"
     CDS             complement(25248..26285)
                     /gene="ypdE"
                     /locus_tag="JN001_001042"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY9052348.1"
                     /translation="MDLSLLKALSEADAIASSEQEVRQILLEEADRLQKEVRFDGLGS
                     VLIRLNESTGPKVMICAHMDEVGFMVRSISREGAIDVLPVGNVRMAARQLQPVRITTR
                     EECKIPGLLDGDRQGNDVSAMRVDIGTRSYDEVMQAGIRPGDRVTFDTTFQVLPHQRV
                     MGKAFDDRLGCYLLVTLLRELHSAELPAEVWLVASSSEEVGVRGGQTATRAVSPDVAI
                     VLDTACWAKNFDYGAANHRQICNGPMLVLSDKSLIAPPKLTAWIETVAAEIGVPLQAD
                     MFSNGGTDGGAVHLTGTGVPTVVMGPATRHGHCAASIADCRDILQMQQLLSALIKRLT
                     RETVVQLTDFR"
     gene            complement(26285..27370)
                     /gene="ypdF"
                     /locus_tag="JN001_001043"
     CDS             complement(26285..27370)
                     /gene="ypdF"
                     /locus_tag="JN001_001043"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY9052349.1"
                     /translation="MTLLASLRDWLKEQQLDAVLLSSRQNKQPHLGISTGSGYVVISR
                     ESAHILVDSSYFVEVEARAQGYQLHLLDATNTLTTIVNQIIADEQLQTLGFEGQQVSW
                     ETAHRWKSELNAKLVSATPDVLRQIKTPEEVEIIRLACGIADRGAEHIRRFIQAGMSE
                     REIAAELEWFMRQQGAEKASFDTIVASGWRGVLPHGKASDKIVAAGEFVTLDFGALYQ
                     GYCSDMTRTLLVNGEGVSAESHPLFDVYQIVLQAQLAAISAIRPGVRCQQIDDAARRV
                     ITEAGFGDYFGHNTGHAIGIEVHEDPRFSPRDTTTLQPGMLLTVEPGIYLPGQGGVRI
                     EDVVLVTPQGAEVLYAMPKTVLLTGEA"
     gene            complement(27385..28632)
                     /locus_tag="JN001_001044"
     CDS             complement(27385..28632)
                     /locus_tag="JN001_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HAY9052350.1"
                     /translation="MAIKKRSATVVPGASGAAAAVKNPQASKSSFWGELPQHVMSGIS
                     RMVPTLIMGGVILAFSQLIAYSWLKIPAEIGIMDALNSGKFSGFDLSLLKFAWLSQSF
                     GGVLFGFAIPMFAAFVANSIGGKLAFPAGFIGGLMSTQPTQLLNFDPSTMQWATSSPV
                     PSTFIGALIISIVAGYLVKWMNQKIQLPDFLLAFKTTFLLPILSAIFVMLAMYYVITP
                     FGGWINGVIRTVLTAAGEKGALMYAMGIAAATAIDLGGPINKAAGFVAFSFTTDHVLP
                     VTARSIAIVIPPIGLGLATIIDRRLTGKRLFNAQLYPQGKTAMFLAFMGISEGAIPFA
                     LESPITAIPSYMVGAIVGSTAAVWLGAVQWFPESAIWAWPLVTNLGVYMAGIALGAVI
                     TALMVVFLRLMMFRKGKLLIDSL"
     gene            complement(28654..28980)
                     /locus_tag="JN001_001045"
     CDS             complement(28654..28980)
                     /locus_tag="JN001_001045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-like phosphotransferase enzyme IIB
                     component 1"
                     /protein_id="HAY9052351.1"
                     /translation="MSKKLIALCACPMGLAHTFMAAQALEEAAVEAGYEVKIETQGAD
                     GIQNRLTAQDIAEATIIIHSVAVTPEDNERFESRDVYEITLQDAIKNAAGIIKEIEEM
                     IASEQQ"
     gene            complement(29199..30164)
                     /gene="glk"
                     /locus_tag="JN001_001046"
     CDS             complement(29199..30164)
                     /gene="glk"
                     /locus_tag="JN001_001046"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HAY9052352.1"
                     /translation="MIKYALVGDVGGTNARLALCDIASGEISQAKTYSGLDYPSLEAV
                     IRVYLEEHKVEVKDGCIAIACPITGDWVAMTNHTWAFSIAEMKKNLGFSHLEIINDFT
                     AVSMAIPMLKKEHLIQFGGAEPVEGKPIAVYGAGTGLGVAHLVHVDKRWVSLPGEGGH
                     VDFAPNSEEEAIILEILRAEIGHVSAERVLSGPGLVNLYRAIVKADNRLPENLKPKDI
                     TERALADSCTDCRRALSLFCVIMGRFGGNLALNLGTFGGVFIAGGIVPRFLEFFKASG
                     FRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTLGHIL"
     gene            30368..31624
                     /locus_tag="JN001_001047"
     CDS             30368..31624
                     /locus_tag="JN001_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ion channel protein"
                     /protein_id="HAY9052353.1"
                     /translation="MLHPRARTMLLLSLPAVAIGIASSLILIVVMKIASVLQNLLWQR
                     LPGTLGIAQDSPLWIIGVLTLTGIAVGLVIRFSQGHAGPDPACEPLIGAPVPPSALPG
                     LIVALILGLAGGVSLGPEHPIMTINIALAVAIGARLLPRVNRMEWTILASAGTIGALF
                     GTPVAAALIFSQTLNGSSEVPLWDRLFAPLMAAAAGALTTGLFFHPHFSLPIAHYGQM
                     EMTDILSGAIVAAIAIAAGMVAVWCLPRLHAMMNQMKNPVLVLGIGGFILGILGVIGG
                     PVSLFKGLDEMQQMVANQAFSTSDYFLLAVIKLAALVVAAASGFRGGRIFPAVFVGVA
                     LGLMLHEHVPAVPAAITVSCAILGIVLVVTRDGWLSLFMAAVVVPNTTLLPLLCIVML
                     PAWLLLAGKPMMMVNRPKQQPPHDNV"
     gene            31739..32065
                     /locus_tag="JN001_001048"
     CDS             31739..32065
                     /locus_tag="JN001_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY9052354.1"
                     /translation="MFRSLFLAAALMAFTPLAANAGEITLLPSIKLQIGDRDHYGNYW
                     DGGHWRDRDYWHRNYEWRKNRWWRHDNGYHRGWDKRKAYERGYREGWRDRDDHRGKGR
                     GHGHRH"
     gene            complement(32206..33444)
                     /gene="mntH"
                     /locus_tag="JN001_001049"
     CDS             complement(32206..33444)
                     /gene="mntH"
                     /locus_tag="JN001_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mn(2+) uptake NRAMP transporter MntH"
                     /protein_id="HAY9052355.1"
                     /translation="MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQA
                     GASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAE
                     IIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL
                     LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSS
                     LTQHLHGGSRQQRYSATKWDVAIAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAY
                     LTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLP
                     SFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWV
                     IVVLVVALNIWLLVGTALGL"
     gene            33780..34982
                     /gene="nupC"
                     /locus_tag="JN001_001050"
     CDS             33780..34982
                     /gene="nupC"
                     /locus_tag="JN001_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside permease NupC"
                     /protein_id="HAY9052356.1"
                     /translation="MDRVLHFVLALAVVAILALLVSSDRKKIRIRYVIQLLVIEVLLA
                     WFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFIS
                     ALIGILQHIRVLPVIIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGK
                     ISRNRMYTMAATAMSTVSMSIVGAYMTMLEPKYVVAALVLNMFSTFIVLSLINPYRVD
                     ASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTG
                     WFGYSISFQGILGYIFYPIAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIAST
                     LSPRAEGIISVFLVSFANFSSIGIIAGAVKGLNEEQGNVVSRFGLKLVYGSTLVSVLS
                     ASIAALVL"
BASE COUNT         9234 a         8692 c         8082 g         9004 t
ORIGIN      
        1 gtcacggcga actgcctttc aaggttgaag tggcacgacc tcattggctg aaggtttacc
       61 ttatgttggc ctgaccgaac aggatgttca ggacgcccat gcgcgcttat cccgttttgc
      121 accctatctg gcaaaagcat ttgctgaaac tgctgccact ggggggatta ttgaatcaga
      181 actggttgcc attccagcta tgcaaaaacg gctggaaaaa gaatatcagc aaccgatcag
      241 cgggcaactg ttactgaaaa aagatagcca tttgcccatt tccagctcca taaaagcacg
      301 cggcgggatt tatgaagtcc tggcacacgc agaaaaactg gctctggaag cggggttgct
      361 gacgcttgat gatgactaca gcaaactgct ttctccggag tttaaacagt tctttagcca
      421 atacagcatt gctgtgggct caaccggaaa tctggggtta tcaatcggca ttatgagcgc
      481 ccgcattggc tttaaggtga cagttcatat gtctgctgat gcccgggcat ggaaaaaagc
      541 gaaactgcgc agccatggcg ttacggtcgt ggaatatgag caagattatg gtgttgccgt
      601 cgaggaagga cgtaaagcag cgcagtctga cccgaactgt ttctttattg atgacgaaaa
      661 ttcccgcacg ttgttccttg ggtattccgt cgctggccag cgtcttaaag cgcaatttgc
      721 ccagcaaggc cgtatcgtcg atgctgataa ccctctgttt gtctatctgc cgtgtggtgt
      781 tggcggtggt cctggtggcg tcgcattcgg gcttaaactg gcgtttggcg atcatgttca
      841 ctgctttttt gccgaaccaa cgcactcccc ttgtatgttg ttaggcgtcc atacaggatt
      901 acacgatcag atttctgttc aggatattgg tatcgacaac cttaccgcag cggatggcct
      961 tgcagttggt cgcgcatcag gctttgtcgg gcgggcaatg gtgcgtctgc tggatggctt
     1021 ctataccctt agcgatcaaa ccatgtatga catgcttggc tggctggcgc aggaagaagg
     1081 tattcgtctt gaaccttcgg cactggcggg tatggccgga cctcagcgcg tgtgtgcatc
     1141 agtaagttac caacagatgc acggtttcag cgcagaacaa ctgcgtaata ccactcatct
     1201 ggtgtgggcg acgggaggtg gaatggtgcc ggaagaagag atgaatcaat atctggcaaa
     1261 aggccgttaa taacgtttca acgcagcatc gcaatccttt ccctgggtga gcgatgctgc
     1321 cgatggcgca gacttaagat ccccggtctt acccgctata accccctcct tttatcatca
     1381 cccaacgcct ttcgctgtaa acggcggttt cgcaaaccaa accaaaaccg taagtaagat
     1441 aaaagcaata gccgccatac ggaaaatctc atttgcagaa atagaaagtg actgctgggt
     1501 tatttcatta ttaatttcat taagaactcc tgaaagcgaa ccataatatt tatccataat
     1561 ttgtgacgat gaattaaaca cggggttaaa ttgatcgatg gttgctgtca actgactatg
     1621 gtgtaacgat tcgcgtcgtc cccacagcgt cattgtcaac gacgtaccaa ctgatcctga
     1681 caaggtacga aaaaaattac tcatactcga ggcattggca aatttattat ctggcaagcc
     1741 tgaaaacgaa atcgttgtta agggtaaaaa gaaacaggca acggcgaatc cctgaaaaaa
     1801 ctgcggcaaa atgatgcctg taaaatcaat cgttggcata aatgtcacag aacgccagta
     1861 atagcaaacc gcatacatca aaaaactaaa tgtcactaac aaccgcatgt ctattttgtt
     1921 gccataacgt cctatcaaag gtgaaattaa tagtggcatg atgccgatgg gcgcataagc
     1981 aagtccggcc catatcgcat tataccccat cgtttcctgg agtaactgcg gcataaggac
     2041 gatcgctcca gagtaaaata aatacgcgca tgtgatactc acaataccaa tggtgaagtt
     2101 acgggactta aacaaactga gatcaagaat cgggttctct gaggtcgact cccaaatgac
     2161 taaagagatc agagaaataa ctgatactac tgttaatatt attattgtac tcgagttgaa
     2221 ccaatccaga tcgcgccctt tatcaagcat aatttgcaag ccaccaacac cgagcactaa
     2281 cagggtcagt cctggtagat tcattttgac cggtgaagtc tcagtttctc ttcctttaag
     2341 taaggttaag cataatgtca ggacgataat ccccataggg acattgatta aaaatatcca
     2401 accccagcta aagttatcac aaatataacc gcccaatatc ggcccacata tcggagcgat
     2461 aatcacggtc attgaccata atgccagagc aaatgttctt ttttctggcg gataattcct
     2521 taataataaa ctctgtgaca gtggaattaa cggccccgcc attaacccct gaacgactct
     2581 aaaaaatatc agcacatcaa gattggtcga taggctacac attaatgaag acagcgaaaa
     2641 aaaggttact gaaagtaaaa ataatcttaa ttcgcctatt ctttgtgcca acctgccagt
     2701 aacagggatc gcaatggcat ttgctacacc aaacgaggtg ataacccagg tgccttcgtc
     2761 tgttgatgct cccagaaagc cagatattgt cggtattgcg acgttagaaa tagtggaatc
     2821 caacatttgc ataaatgtcg ctaatgacaa tgcaatagtg acgcaccata acgtcccacc
     2881 ggttaatggt gccggagttg atttagtgat tgccattaaa gttgtccatt atgcgaaata
     2941 atgttgctaa tttctttttc tatcggactg gtatcgataa ctaaagcctt actggtataa
     3001 gccggcatgg aggtcacggt tgaagccagc tcaggcatct cggcaatgtc ttcgttcttc
     3061 gtatcaatag ttgctgtcat cgataaacca atacgcaagg gatgttccat gagttctttt
     3121 ggatcaagag aaacttcaac cggtacacgc tgaacgattt tgatccagtt ccctgtcgca
     3181 ttttgtgcag gtaataagga gaacgcattg ccggttccca tattgatccc tgtcacccga
     3241 ccatgaaaca caacattttc accataaaga tcgctgataa tattgaccga ttgaccaatc
     3301 cgcacatccg tgagttgtgt ttctttaaag ttggcattaa cccacatttg acgtgccggt
     3361 acgacagcca ttaacgattg tccggggctc actgtttcgc cgacctgaac acttctctgg
     3421 gcaatatagc cggtaaccgg actcttaata tccgtacgtt taagcgccaa ccaggcttct
     3481 ttagttgcat ccgccgcttc aacgacttgt ggctgacggt ttaatggtgt gttcattact
     3541 aaagctttat tcgctttata agcctggata gcggcattca atgccgcttt gctacttatt
     3601 aacgtatctt tggtatgctc cagcgtttct tttgaaataa ccccctgctt cgctaacggc
     3661 actcgacggt tataatcttc taaagattgt tgatactgaa tacgtgctga agcgacttcg
     3721 gcactgtatt gtttatcctg taagtatagt ttattcgttt gccgaacaat atttgccaga
     3781 ttatttttag ctttattgag tgcgatagtg gcatcagttt tatccagtga aactaaaatg
     3841 tcaccttgtc gaacgtagtt cgtatcttta tgattaacga cagtgacact acctgagact
     3901 tgtgcagaaa ttggatctgc attccccgtg acataggcgt catctgtact aatcatgtct
     3961 tctaattcca ttgaccaata gacataggca cctgaaaacg caataaataa aactaccgcc
     4021 aataaagaaa agtattttct tctgttagaa tgttttttat ttgaattaat ctgttccact
     4081 attatctctc atttctcata gatgaaattt atgaattgaa tgaaaagagc attcattctt
     4141 catatcaaac acagtgcatg tgttgcacat tatcccagga acgttggagg cctaatttaa
     4201 atgaggtgca aaaaaaacaa cagaggacta aaccgtggct tttgcaatac aattcttacg
     4261 cctgtaggat tagtaagaag acttatagtg ctaacttgaa actataaatc atcggtacaa
     4321 cccctgattt tattgttgac atttcattta tgccgactat ttatatggta tacttgtcga
     4381 attatcttaa aggaagctca gattttctta tttttattga gaaaatgaga tgacgcctta
     4441 tgtctgtatt actacaggga gaagggagat gcttcattgc aaagggaata atctatgaac
     4501 gcaataatta ttgatgacca tcctcttgct atcgcagcaa ttcgtaattt attgatcaaa
     4561 aacgatattg aaatcttagc ggagttgact gaagggggaa gcgccgttca gcgggtggaa
     4621 acacttaagc ctgatatcgt catcattgat gtcgatatcc ccggagttaa cggtatccag
     4681 gtgttagaaa cgctgaggaa gcgccaatat agcggaatta ttattattgt ctccgctaaa
     4741 aatgaccatt tttacgggaa acattgtgct gatgctggcg ctaatggatt cgtgagtaaa
     4801 aaagaaggca tgaacaatat cattgcggct attgaagctg caaaaaatgg ctactgctat
     4861 ttccccttct ctctcaaccg gtttgttgga agtttaacgt ccgaccagca aaaactcgac
     4921 tccttatcga aacaagaaat tagtgtcatg cggtatattc ttgatggcaa ggataataat
     4981 gacattgctg aaaaaatgtt catcagcaac aaaactgtca gcacttataa aagtcgcctg
     5041 atggaaaaat tagaatgtaa atcactgatg gatctttaca cattcgcgca acgtaacaaa
     5101 atcggctaat cacatgaagt ttttacccta tttttttctt ctctgttgtg gtctttggtc
     5161 gaccataagt ttcgcagacg aagattacat cgaatatcgt ggcatcagta gtaacaaccg
     5221 tgtcacactt gatccagtac gtctgagcaa caaggaatta cgttggttag cgagcaaaaa
     5281 aaatcttgtg attgcagtac acaagtccca aacggctacc ttgttgcata ccgattcgca
     5341 gcaacgggtt cgtggtatta atgctgatta tttaaatctt ttaaaaagag cgttaaatat
     5401 caaattaaca ctccgggaat acgccgatca tcaaaaagca atggacgcgc tggaagaagg
     5461 tgaagtcgat atagtgttat cacatttagt tgcttcgccg cctcttaatg atgacattgc
     5521 tgcaaccaaa ccactgataa ttacctttcc ggcgctcgtc accacccttc acgattcaat
     5581 gcgaccgctt acctcatcaa aaccagtaaa tattgctcga gtagcaaatt atccccctga
     5641 cgaggtaatt catcaatcat ttccaaaagc aacaattatc tcttttacaa atttatatca
     5701 ggcattagca tccgtctcag ccggacagaa tgattacttt attggtagta acatcattac
     5761 cagcagtatg atttcccgct atttcactca ctccttaaat gtagtgaaat attataactc
     5821 accgcgtcaa tataattttt tcttgaccag aaaagaatct gtcgttctta atgaagtact
     5881 caatcgattt gttgatgctt taacaaatga agttcgctat gaagtttcac aaaattggct
     5941 tgatacagga aacctggcct ttctgaacaa accattagaa ctcactgaac atgaaaaaca
     6001 gtggattaag caacatcccg atttaaaggt gctggaaaat ccttactctc ctccctattc
     6061 tatgacggat gaaaatggct cggttcgggg cgttatgggg gatattctta atattattac
     6121 cttgcaaaca ggtttaaatt tttctccgat caccgtttca cacaatatcc atgccggaac
     6181 acagcttaac cccggtggat gggatataat acctggcgct atttatagtg aagatcgaga
     6241 aaataatgtt tcatttgcag aagctttcat aacaacgcca tacgtttttg tcatgcaaaa
     6301 agcacctgac agtgaacaaa cattaaaaaa aggaatgaaa gttgccattc catattatta
     6361 tgagctgcat tcgcaattaa aagagatgta tccggaggtt gagtggataa aagtcgataa
     6421 cgccagcgct gcatttcaca aggtcaagga aggtgaactt gatgctctgg tcgcgacaca
     6481 gctaaattcg cgttacatga tcgatcatta ctatcctaat gaactgtatc attttcttat
     6541 tcccggcgtt ccgaatgcat cgctttcgtt cgcttttcct cgcggagaac cggaacttaa
     6601 ggatattatt aataaagcac tgaatgcaat tcccccaagc gaagttctgc gcctgacgga
     6661 aaaatggatt aaaatgccca atgtgaccat tgacacatgg gacctctata gcgagcaatt
     6721 ttatattgtt acgacattat ccgttttatt agttggcagt agccttttat ggggattcta
     6781 cctgttacgc tcagttcgtc gtcgtaaagt cattcagggt gatttagaaa accaaatatc
     6841 attccgaaaa gcactctcgg attccttacc aaatccaact tatgttgtaa actggcaagg
     6901 taatgtcatt agtcataata gtgcttttga acattatttc actgcggatt actacaaaaa
     6961 tgcaatgtta ccattagaaa acagtgactc accctttaaa gatgtttttt ctaatgcgca
     7021 tgaagtcaca gcagaaacga aagaaaatcg aacaatatac acacaggtat ttgaaattga
     7081 taatggcatc gagaaaagat gcattaatca ctggcataca ttatgcaatc tgccagccag
     7141 cgatcatgct gtttatattt gtggttggca agatattacc gagacgcgtg atttaattca
     7201 tgcactcgaa gtagagagaa ataaagcgat caatgcaact gtcgcaaaaa gtcagtttct
     7261 ggcaacaatg agtcacgaaa taagaacacc aataagctcc attatgggct tcctggaact
     7321 tctgtcgggt tctggtctta gcaaggagca acgggtggag gcgatttcac ttgcctacgc
     7381 caccggacaa tcactcctcg gcttaattgg tgaaatcctt gatgtcgaca aaattgaatc
     7441 gggtaactat caacttcaac cacaatgggt cgatatccct actttagtcc agaacacttg
     7501 tcactctttc ggtgcgattg ctgcaagcaa atcgatcgca ttaagttgca gcagtacatt
     7561 tcctgatcat tacctggtta agatcgaccc tcaggcgttt aagcaggtct tatcaaattt
     7621 actgagcaat gctctcaaat ttaccaccga gggggcagta aaaattacga cctccctggt
     7681 tcacattgat gacaaccacg ctgttatcaa aatgacgatt atggattctg gaagtggatt
     7741 atcgcaggaa gaacaacaac aactctttaa acgctacagc caaacaagtg caggtcgcca
     7801 gcaaacagga tctggcttag gcttaatgat ctgcaaagaa ttaattaaaa atatgcaggg
     7861 cgatttgtca ttagaaagtc atccaggcat aggaacaaca tttacgatca caatcccggt
     7921 agaaattagc cagcaagtgg cgactgtcga ggcaaaagca gaacacccca tcacactacc
     7981 tgaaaagttg agcatattaa tcgcggatga tcatccgacc aacaggctat tactcaaacg
     8041 ccagctaaat ctattaggat atgatgttga tgaagccact gatggtgtgc aagcgctaca
     8101 caaagtcagt atgcaacatt atgatctgct tattactgac gttaatatgc cgaatatgga
     8161 tggttttgag ttgactcgca aactccgtga gcaaaattct tccttaccca tctgggggct
     8221 tacagccaac gcacaggcta acgaacgtga aaaagggtta agttgcggca tgaacttatg
     8281 tttgttcaaa ccgttgaccc tggatgtact gaaaacacat ttaagtcagt tacaccaggt
     8341 tgcgcatatt gcacctcagt atcgccacct tgatatcgaa gccctgaaaa ataatacggc
     8401 gaacgatcta caactgatgc aggagattct catcactttc cagcatgaaa cgcataaaga
     8461 tctacccgct gcgtttcaag cactagaagc tggcgataac agaactttcc atcagtgtat
     8521 tcatcgcatc cacggtgcgg ctaacatcct gaatttgcaa aagttgatta atattagcca
     8581 tcagttagaa ataacacctg tttcagatga cagtaagcct gaaattcttc agttgctgaa
     8641 ctctgtaaaa gaacacattg cagagctgga ccaggagatt gctgttttct gtcagaaaaa
     8701 tgactaaata gcggctccca caatgttcaa atgtgggagc tatttaccag cacatcttac
     8761 atttatgatg agaactcctg gcgaatttgt tccccatgct ggtcgagcgt tgccgctccc
     8821 ggcataacat gcgggtccgc gcagccgctg atttttatcg gattacccgg catcattatt
     8881 cccccggctt caatcaacat atttctcgcc tgagtttgtg gcaatttaat ggcctcagcc
     8941 acacttaata acggcgcgac gggtacacca acttcatgta ttctggctaa ccaaacttca
     9001 gctgcctgcg tttttaacgt ccgctcaata tattgtttaa gaatagcctg gttttgtacg
     9061 cgtaaaatat tgctgctaaa tcggggatca ttaaccagtt ccgtaagctc cagtgcctgg
     9121 cataacgcag aaaaaagctt gtcattacca caacaaatcg taatcggctt atcctgagta
     9181 ttgaaaacat caaaaggtgc catgtaggga tggcgatttc ccagacgttg tggtgacttc
     9241 cctgtcgcga tatatgccat cagaccatgc tccagaaaac tcagcgtggc atcaaacatc
     9301 gctatatcga catgcgcccc tctctggctc ttttcgcggc cataaagtgc actcactatt
     9361 ccgctgaata aatagacacc gccgcataga tccgcaagag atgtaccaac gcgcactggc
     9421 ggagcatcag gatatcctgt ttccatcatt atcccgctca ttgcctgaat gatggtatcg
     9481 taggcaggag catcttttag cggaccggta tgtccgaaac ctgacgatga agcatatatg
     9541 aggcgcgggt tgatttcttg aagcgtttcc catgaaaacc ccagtttttc cattgtacct
     9601 gggcgaaaat tctcagctaa tacatcagct tgtttgagca tatttataaa tatactttta
     9661 tcgtaatcat tctttaaatc aagaaccaca ctctctttgc catgattaat aaaactgtaa
     9721 tagagtgact gtccatccac atagggacca aatgtgcggg tatcatcacc atgacccggc
     9781 ggctcaactt taattaccct tgcgcccata ttacaaagaa gttgagttcc gaaaggtcca
     9841 ttaaggacat gtgtcatatc gataactaat aagccttcaa acggcccttt gctttcatta
     9901 tttgtcattt gcttatgcct tgaaaaaagc cgaaggtgaa aagacacttc ggcatttatg
     9961 taaaatcaat aacatgatta attatgaaac cagtcgactg acataaatcc acaagggagc
    10021 cgtgacgaca aagcccagta cgctcacagc caatgacgct gtaccagtac gggtgtagac
    10081 attaaaccgg ctggcaataa taattccgga gaatgccggc ggtaatgcgc ctgccagtac
    10141 catcatctgc agatgttcgc tgttcaaatg acatgccata ccaacgagaa gcagtgccag
    10201 tggcatcaga atcagcttca ggaaggtgtt ataaacaatt tcggcactga actcgaattt
    10261 atgtgcagcc agagtcaacc ccgcagcgaa taccgctacc cctgagttag ccttcgcaat
    10321 cagattaaag gttgggtccc atgctgccgg aatttttacc ccaaccaaca ccaggatcgt
    10381 tgccagaaca ggtgcccata ctactggctc ctttgccgca gaaattaatg cactcagatt
    10441 actattcttc ttaccatccg ctcctgaaga aggattcagc aaatacagac caataggaat
    10501 agtaattgcg ttaacaataa tagaaataat tgctaccact aaacctgttg atacggaatc
    10561 accataaata ggatcgagaa ctgcaaaccc caggaatcca atggtaggtg aacctgcaat
    10621 taatgcacat acagctgctt ctgcatgggt acgtttaaaa aatttgtagc aaccgaacca
    10681 ggagaaaaag aaacatccga caataaccac aagtgataca agggtcagac gagtgtccgc
    10741 aaaaatcatt tccctgtttg cccgagtaat agatacaaat agagccgcag gaagcgcgta
    10801 gtttaatacc agtttattaa atgcgcgggc ttgatcttct gaaaaagttt ctcgtctgcc
    10861 gctaaaataa cccaacagca tgattacgat aataggcaat aaatcgccaa taaaaaatgt
    10921 tagcataata gtatttccga taagggtccc ctcaccatcg cataatgaat tggcaagagg
    10981 agacgatgtc agtatttaat taccagcgac ttgttttggg ttaagtttgg taatatggcc
    11041 actttcagtt cctgctgcag ggtcgatgac cacattaata atggtcggtt tgcgcgactg
    11101 aataccggtg gttaaagcat gacgaagttc atctgtcgtg gtgacgttat agccaacgcc
    11161 acgaaacgca tccattaatt tgtcatacct tgcatggtgc aacagatccg ttggagatgg
    11221 tgcaccagcg ccactgagat caacaccgtc tcctctgtag atgccgccat tattaaaaat
    11281 aacgatcgtc accggcaggt tatatcgaca aatcgtttca atttccatcc cactgaaacc
    11341 aaaagcacta tcaccttcaa tggcgacaac cggagaacca gaagtcacgc tagcaccgat
    11401 ggcatagccc ataccgatgc ccatgacacc ccaggtacca caatccagac gacgacgtgg
    11461 tttatacata tcaataatat ttcgtgcatt atccagggta tttgcacctt cattaactaa
    11521 ataaatatcc tggttctcgc gcaatacgtc gcgcacagaa cttaatgcat taaagtaatt
    11581 taatggttga gtatctgtac ttaatttttc atgcattttt tgtgcatttt gctgcttgtg
    11641 gatatttaaa atatcgcgcc ataccagtgg agtcgtaaat gtgttttgtt tcagttctgc
    11701 cagcatacct tgcatactgg atgcaatatc accaatgact ggcacagcaa tggggcggtt
    11761 gctgtcaatt tcctgcggtt caatatccag ttgaataaac tgtgtatctg ccgcccatcc
    11821 ttttttaccg tgtgccaata accaattcag tcgtgcacca acaagcatga caacgtcagc
    11881 atttgccagg gcaaacgaac gcgcagctgc cgcagaaagt ggatgcgtat cttcaaggat
    11941 ccctttcgcc atagacattg gcaggaatgg aatctgagca ctttcaataa attcacgaag
    12001 ctgttcatca gcttgtgaat acgccgcgcc tttgccaagg ataattaatg gccgttcagc
    12061 ttttgctaaa agcgaaattg cgctagtgac tgacttcggg catggcaata atgctggcga
    12121 cggattttca actttaacaa tcgtggttaa cgcttcgtct ttttccatcg tcgcggccag
    12181 gacatttgct ggcaaatcaa gataaactcc gccagggcga cccgatacag agacccggat
    12241 agcgcgtgcc aatgcaatgc caagatcctg cggctgatta acgcgaaatg ctgctttggc
    12301 atacggtttt gccgcattca tttggtccag ctcttcataa tcaccttgct gtaggtcgac
    12361 gatcgcgcgg tcgctggagc cgctaatcat gatcatcgga aaaccattta ccgttgcgtt
    12421 ggccaatgcc gtcaaaccat tgaggaatcc tggcgcagaa actgtcaggc agatccccgg
    12481 tttttgggta agaaaaccgc ttgccgcagc ggcatagcct gccgactgct catgacgaaa
    12541 accaatataa cgaatgcctt ccgcctgggc atggcgtgcc atatccgtca caggaatacc
    12601 tacaacacca taaatagtgt caatattatt ctgttttaat gcttcaacga tgatatgcat
    12661 accatctgtc atttgaagtt gatctgacat gattaataac ctcgaaattt ttataaattg
    12721 ggagccagaa gcccccgtta atatcagatg gcgtggtttt gcttcattgc agcaatttca
    12781 tcgtcgctat aacctagctc ctgcaataca gcagcggtat gttcacctaa tagcggcgca
    12841 gctttaatat ccggcgtaaa agcagagaat ttcattggac aaccaacggt cagatatttt
    12901 ccacgcaacg gttgttccac ttcaacaaca ctgccacttt ggcgcaaaga gggatcaagt
    12961 gaaatttctt tcatacttaa aaccggtgca caaggaatat caaactgagt caaataggcc
    13021 accgcttcat gtttatcaat agtgacagtg tatttttcga tttcagcaaa aatatcgaaa
    13081 atatgtggct gtcgggcatg ggctgtactg tatgccggat cggtaatcca ttctggtttg
    13141 ccgatggctt tacaggtgtt ttcccagttt tgctcctgaa tagtgaaata aatataggcg
    13201 ttcggatcgg tttcccagcc tttacatttc aggatccagc caggctgacc gccaccacct
    13261 gcattaccac cgcggggaac tgcatcacca aatgtaccat tcggatactg cgggtattct
    13321 tccagataac ccaatttatc gagacgctgc tggtcacgta atttcacgcg gcaaaggttc
    13381 aatacggcat cctgcattga catggtgact cgttgcccac gccccgtttt ttcgcgatgc
    13441 agcaaagcag caagcaaacc gatcagcaaa tgcattccgg tgttgctgtc acccaacgct
    13501 gcagcgctta ccagcggcgg accatcccaa aaacccgtag tggatgccgc gccacccgct
    13561 gcctgagcaa cgttttcata ggcttttaca ttcacataag gcgaacactc atcaaaccct
    13621 ttgatcgaac caaaaatcag acgtggattg atttcttgaa tatgctccca ggtgaagccc
    13681 atgtgatcaa tggcccctgg atgaaagttc tcgactaaga tatcagcttc gcggatcagc
    13741 ttttccatta cctctttgcc ttccgctgtt ttggtattta actcaataga acgtttgtta
    13801 ctgttaagca tggtgaagta aagcgcatcg atatcaggaa tatctcgcag ctggtgacgc
    13861 gttacgtcac caacgccggg acgttcaatt ttaataacgt cagcgccaaa ccaggccagc
    13921 atttgagtac aagatgggcc agattgcaca ccggtgaaat cgagaacttt aattccttga
    13981 agtggagttg acatagcaat acctattagt taattaaata tgtgttaatt tagcgtttat
    14041 ttaaggcgta atatcttcta taaataaccc gcaaaatatc gtcgtagctg cactcgatat
    14101 ttttaaaatc ctgtatcaag tgctgaaaat catttcatcg ccacttccaa ttcctttctg
    14161 catggtaagt agtgaggacg aaaagaagaa tatgataaat attgattcgt ggtaatcaga
    14221 gagagtcgcg acatttgtga tgttattctt acaactgtaa gaagcgccgg tgatttacaa
    14281 gtaagggtat gattacgctt tttaaagcgt accataaaac ataacataat aaatgatttg
    14341 tgatgacacg ggattattgg ggtttacttt gaggaagata aaatgcgtgt ttatagaacc
    14401 gcgagcgcca aataatttta tgaccacaac ctgtcgtatt gtggtcataa aaaattgtcg
    14461 gctggaggga gttaaatcct ttacctcaat atactgcctg tcagcattag ttcacaaaca
    14521 gtgcttcgct gtcgacgatg attccatctt ccgcaccttt cagcgccagg tttgcctcgt
    14581 agtattgctt tttatcaagc agtttctgcg catcagcaag tgcattacga gtctgtttaa
    14641 gcggcatcag atattggttt tccattacgc caacaccggc caggcgaagt tcttccattg
    14701 cgcccttttt atcccctttc gccatttttt cattggcaat ttttatcgcg gcttcttttt
    14761 cgggagttgc tacataactc tcagaaattc cgacagatgc attaatgaca atatattggt
    14821 catcattgag attggtcttt ttacctggct tagcgaactt tgcccattcg gtactgtcat
    14881 ctgacagcaa agcggaagct tcattggtca gttcttttgc cttttctgga tcgccatgaa
    14941 acagagccag gcgcgctacc tgcacgtcac gcatcgcata taaaccttgt tcagagatac
    15001 gctctgctgc tgccgttttc tgggtttgct gaacttgctg agtttgctgt tgtgccgcta
    15061 ccggtgcatt atcagcagcc catacagttg aagatgccag aattgctgtg accatcgtag
    15121 ccataattaa acgtttcata cttacctcat tctttaacag ttttagaaaa cgccgccatc
    15181 atattgggtg agcatgaaat gagaaatcag agagcaacgg tcattttgaa agggttatct
    15241 tacagttgta gttattatcg caagaagtat tttagtctta caattgtagg aatctgcttc
    15301 ctgtcgcaga gaactattct tatgtaccac aaagagatgt catttattat atcgatgtaa
    15361 atattgatta attatatgta aatacagcca taacatcgta ggttctcagt gaaccatttt
    15421 caggataact ttctatgaaa gtaaacttaa tacttttcag cttattttta ttggtctata
    15481 ttatggcatg caatgttttt gcattttcca tttctggtgg tgtaagtgag aggagctata
    15541 aagagactga aaaaacatca gcgatgacga ccacacactc tacaaaactt cagccatcac
    15601 aggcgatttt gtttaagatg agagaagatg cgccaccatt aaacctcaca gaagaaatca
    15661 cgcctactta tccgacaaag gcgaattatc ttattcatcc tgtgcgatag cgtctgtcac
    15721 atggcaggtg aacaatcatg tctgatgctg atgtgaacac ctgcccaaat gagccatcct
    15781 gacccactat cgcctgccat accccaccat aaagcgaatc atcaagccac aagccggggc
    15841 aagaaacata aatatctccg tcactagttc attaccgcca gttaaccaca tggtgaagta
    15901 ataaatgagt gcagcgagga tcaccatgcc gaagaaagaa gagaccgccg ataccacgtt
    15961 cagtacctga ccgatgtagc cgcttacgca gacaatacac agggcgagaa acatccataa
    16021 ataaatcata gctcaacctc ctgccgcgct aaaaaacctg taacttcagt cactttaata
    16081 gtaagacaat ccttaacctc tggcaatttt tgctaagcat caatgaaaac agcatgttaa
    16141 atgcaagact gttgtgtacg gaaaaatatt tactttgcac gattaataat cagtagctga
    16201 aagcagtcag cgagtgataa agtacagata ccgcattcat gctcctcgtg gttatgtcct
    16261 gactagtctt tacacacttt acaggaacca ttgtcgtaca tgatggccca accaattgag
    16321 tgtaccgctg tcgacatgga atcttctgcg atacaacaat tcgtatctac agaaggtaac
    16381 tatgtttcca caatgcaaat tttcccgcga gtttctacat cctcgctact ggctcacatg
    16441 gtttgggctt ggtgtactct ggctttgggt acagcttcct tatcctgttc tctgctttct
    16501 cggcacgcgt attggcgcaa tggcgcgacc attcctgaaa cgtcgtgaat ctatcgcccg
    16561 taaaaacctg gaactttgtt tcccgcagca ttctgcggaa gaacgcgaga agatgattgc
    16621 cgaaaacttt cgttcactcg gcatggcgct ggtagaaacc ggcatggcat ggttctggcc
    16681 cgacagtcgc gtacgtaaat ggtttgatgt tgaagggttg gataacctta aacgcgcaca
    16741 aatgcaaaat cgcggcgtaa tggttgtcgg cgtccatttt atgtcgctgg aactgggcgg
    16801 ccgcgtgatg ggactgtgcc aaccaatgat ggctacctat cgtccacata ataatcagct
    16861 gatggaatgg gtgcagaccc gtgggcgcat gcgctctaac aaagcgatga tcggcagaaa
    16921 taatctgcgc ggcattgtcg gtgcactgaa gaaaggtgaa gcggtatggt ttgctcccga
    16981 tcaggattat ggtcgtaaag gcagctcctt cgcgccgttc tttgcggtgg aaaatgtcgc
    17041 cacaaccaat ggcacctatg ttctctcccg tctctctggc gcagccatgt tgaccgtaac
    17101 gatggtaaga aaagcggatt acagcggata tcgtttgttc atcaccccag agatggaagg
    17161 ctacccgaca gatgaaaatc aagccgctgc ctatatgaac aagattatcg agaaagagat
    17221 catgcgcgca ccggagcagt acctctggat ccactgtcgc tttaaaacgc gcccggtggg
    17281 agaatcgtcg ttgtacattt aacaaactgc tcttactctt tccctcctca aatcggccat
    17341 aataacctca tggtttttat ggcttttttc ttaaggtttt ttccttcgct gaatatctaa
    17401 ttattaccgt cagaaattaa actgtcgccg atatgagaca cttgtaagtt actaaaagta
    17461 aataagaaaa tgcctcttgt ctcgtttcag ttttaggcgt acattagcgc cgtctcgagc
    17521 agtttagctc agaattctgg ggtgatgccc acggtaaaat acagggcttt taaggtcgct
    17581 ttgcccagtg tcaactcact gtatcaggtg taatgaagtc attcaggcgt aacagcaatt
    17641 acgcggagag atgtaaagtg aaatatttct ttatgggcat ttcttttatg gtcatcgttt
    17701 gggccggtac ttttgccctg atgatctaaa agcaaactgt gcaatgaaaa acaggagcca
    17761 tcaggctcct gtttgcattt ctgacgacgg tgtttattcc gcgttttcgt gaatatgttt
    17821 gctgctggcg ggtagtaaac cgtcggcacg gaacatcgct ttaatccctc tgatggcctg
    17881 acgaatacgg tcgcggtttt caatcagtgc aaagcgaaca tgcgtatcac catagtcgcc
    17941 aaagccaatc cccggcgaga cacagacctt cgcttcgtta agcaatttct tggcaaatac
    18001 cagcgagccc atggcagcat acggttccgg tattttcgcc cagacataca tcgaagcctt
    18061 cggcatttca actatccagc ccgcttcatg cagcccttta accaatacat cacggcggcg
    18121 tttgtactgt tcggcaatgt cgcgcacgca ctgttgatcg ccctccagcg ccgcaatcgc
    18181 cgccacctgc aacggcgtaa aggtgccgta atcgtgatag cttttaatac gagccagggc
    18241 gctgaccagc gttttgttgc caaccataaa gccgatacgc cagcccgcca tgttgtagct
    18301 tttcgacagc gtaaagaact cgactgccac atcgcgtgca cccgatacct gcatgattga
    18361 cggcgctttc cagccatcgt agacgatatc ggcataggcc aggtcgtgga ccaccagcac
    18421 atcgtagcgt ttcgccagcg ccacaacctt ttcgaagaac tccagctcca cgcattgcgc
    18481 ggttggattc gacgggaagc cgaggatcat catcttcggt ttcggataac tttcacgaat
    18541 ggcgcgctcc agttcgttga agaaatcgac accttccacc agcggcactg agcgtacctg
    18601 cgccccggca atcaccgcgc cataaatatg gatcgggtaa cttggattcg gcaccagcac
    18661 cgtgtcacca tgatccagcg tcgccagcat cagatgcgcc aggccctctt tcgaaccaat
    18721 agtgacgatg gcttctgatt ccgggtcgat ttcaacgtcg tagcgatcct gataccagcg
    18781 ggaaatggcg cgacgtaacc gcggaatgcc gcgtgaagtg gagtaaccat gcgtgtcctg
    18841 gcgctgggcc acagtacata atttttcgac gatatgcggc ggagtcgcac cgtccgggtt
    18901 acccatgctg aaatcgataa tatcttcgcc gcgccgacgc gcagccattt tcagttcagc
    18961 ggtgatgtta aaaacgtagg gcgggagacg atcaatgcgc gtaaagcgac gttcagggcg
    19021 agtgtcagcc ataatttcct cagattaacg ttagcgcccg gaccgtccga gcgacgctgc
    19081 cacaatggtg gctgttttga aaatagcctg attaatttct gtctgtccag cgttttagaa
    19141 catttttatc aatggcttta aatgaggaac tccacttcaa aaacaggaaa tttttctacg
    19201 ctaacaagaa aattaccacc aattttatta acattataat ttcaataaat ttaccagcca
    19261 gaagtgcatt atcaagagat acattgctaa tacaccattt atctttcaat ccccttttaa
    19321 atttatggtt tttcctcaaa aacggcctgc tggtcatcag ccttcaggtt acctatcata
    19381 gaggtttaat ccttattcag agtcacccgt gcacgaaata ttcaacatgc tgctggcggt
    19441 cttcgatcgg gcagcgttaa tgcttatctg cctgttcttt ctcatccgta tccgcctgtt
    19501 tcgcgagctg ttgcacaagt cggcacactc cccaaaagag ttgcttgctg ttaccgccat
    19561 tttctcgctg ttcgccctgt tcagcacctg gtccggcgtt cccgtagaag gctcgctggt
    19621 gaacgtacgt attatcgcgg tgatgtccgg cgggattctg tttggcccgt gggtaggcat
    19681 cattaccggc gtgattgcgg gtattcaccg gtatttaatt gatatcggcg gcgtgacggc
    19741 gatcccctgc tttatcacca gcattctggc gggttgtata tcaggctgga taaacctgaa
    19801 aatccccaaa gcacagcgct ggcgcgtcgg tattctcggc ggcatgttgt gtgagacgtt
    19861 gaccatgatt ctggtaattg tctgggcacc aactaccgcg ttggggatcg atatcgtctc
    19921 taaaatcggc attccaatga tcctcggtag cgtctgtatc ggctttattg tgcttctggt
    19981 gcaaagcgtt gagggcgaaa aagaggccag cgccgcgcgg caggccaagc tggcgctgga
    20041 tatcgccaac aaaacgctac cgctgtttcg ccatgtcaat agcgagtcat tacgcaaggt
    20101 ctgcgaaatt atccgcgatg acattcacgc cgatgcggtg gcgattacta ataccgatca
    20161 tgtgctggcc tatgttggcg tgggtgaaca taactatcag aatggcgatg acttcattag
    20221 cccgactacc cgtcaggcga tgaattacgg aaaaatcatc attaaaaaca atgatgaagc
    20281 ccaccgcaca ccagagattc attccatgct ggtgatccca ttgtgggaga aaggcgttgt
    20341 gaccggaacg ctgaaaattt actactgcca cgcgcatcag ataacctcgt cattacagga
    20401 aatggcggtt ggtctgtcgc aaatcatctc cacgcaactg gaggtttcac gcgccgagca
    20461 gctacgtgaa atggcaaata aggcagagct tcgcgccctg caaagcaaaa ttaatcccca
    20521 ttttctgttt aacgctctga acgctatttc atcgtcaatc cgtctgaatc cggataccgc
    20581 tcgccagttg atctttaatc tgtcgcgtta tctgcgctat aacattgaat taaaagacga
    20641 tgagcaaatc gatatcaaaa aagagctgta tcaaattaaa gactatattg ccattgagca
    20701 ggcccgcttt ggtgacaagc tgacggttat ctatgatatt gatgaagagg tgaattgctg
    20761 cattcccagc ctgctgatcc agccgttggt ggagaacgcc attgtccacg gtattcagcc
    20821 ttgcaaaggt aaaggcgttg tcaccatcag cgttgcagag tgcggaaatc gggtacgcat
    20881 tgcggtgcga gataccgggc acggcatcga tccaaaggtg attgagcggg tcgaagcgaa
    20941 tgaaatgccg ggcaataaaa ttggcctgct gaatgtccat catcgcgtga agttattgta
    21001 tggcgagggg ctgcatatcc gccgcctgga gccggggacg gaaattgcgt tttacattcc
    21061 taaccaacgc accccagtcg cctcacaggc tacgttattg ctttgagccg gagtgatatt
    21121 gtgaaagtca tcattgttga agacgaattc ctggcacaac aggaactgag ctggctaatt
    21181 aaagagcaca gccagatgga gattgtcggc acctttgacg acggtctgga cgtgttgaag
    21241 tttttgcagc ataaccgcgt cgacgccatt tttctggata tcaatattcc gtcgctggat
    21301 ggcgtgttgc tggcgcaaaa catcagccag ttcgcccata aaccgtttat tgtgttcatc
    21361 accgcgtgga aagaacatgc ggtagaagcg tttgaactgg aggcgtttga ctacattctc
    21421 aaaccgtatc aggagtcacg tattaccggg atgctgcaaa aactggaagc ggcctggcaa
    21481 caacagcaga ccagcagtac gcctgccgcg acggtaacgc gtgagaatga caccattaat
    21541 ctggtgaaag atgagcgaat aatcgtcacg ccaattaacg atatctatta cgccgaagcg
    21601 cacgagaaaa tgacctttgt ctatacgcgg cgtgaatcct acgtaatgcc gatgaacatt
    21661 accgaatttt gcagcaaact gccgccgtcg cattttttcc gctgccatcg ctcattttgt
    21721 gtcaatctga acaaaatacg cgaaatcgaa ccgtggttta ataacaccta cattctgcga
    21781 ctgaaagatc tggattttga agtgccggtc agccgcagca aagtgaaaga atttcgccag
    21841 ttaatgcatc tttaatcggg aactttcatg aaagcaccag gcttgcccgc cgatcaacaa
    21901 tttttcgccg atctgttcag cggcctggtg cttaactcgc aactactggg gcgcgtctgg
    21961 tttgccagcc agcctgcctc gttaccggtg ggcagtttat gtattgattt tccccgtctg
    22021 gatatcgtgc tgcgcggcga atacggcaac ctgctggaag caaagcagca gcgaatggtg
    22081 gaaggagaaa tgctgtttat tccggcacgc gcggctaatt taccgatcaa caacaaaccg
    22141 gtgatgctgt taagcctggt gttcgcaccg acctggcttg ggttatcgtt ttacgatagc
    22201 cgcaccacgt cgttgttgca tcctgctcgc cagatccagc ttcccagcct gcaacgcggt
    22261 gaaggtgaag cgatgcttac cgccctcact catcttagcc gttcgccgct ggagcagaat
    22321 atcattcagc cactggtgtt aagtttgctg catctttgcc gcaacgtggt gaatatgccg
    22381 ccgggtaatt cgcaaccgcg cggcgatttt ctctatcaca gcatttgtaa ctgggttcag
    22441 gataattata cccagccgct cacccgcgag agcgtggcgc agttttttaa tatcacgccc
    22501 aatcatctgt caaaactgtt tgctcagcat ggaacgatgc gttttatcga gtatgtgcgt
    22561 tgggtgcgaa tggcgaaggc gaggatgatt ttgcagaaat atcatctgtc aattcatgaa
    22621 gtggcacagc gttgcggttt tccggatagc gactattttt gtcgcgtttt ccggcgtcag
    22681 tttggtctga cgccgggaga gtacagcgcc cgttttcagg gctaacgtca gaaggttaat
    22741 tctgtttcca gcagcgtcag gatactttgt gcatcttgcg cggcaaacaa cgactggcgg
    22801 aagtttttat tcaccagttt acgcgccagc tgcgagaaga ctttcacatg attcatccct
    22861 tcgttagcac ccagcgtcag catgatcacc agttcgactt cgcccatttc tgactgccag
    22921 tcaatcggtt tcgccagccg ggcaatgctg atactggaat gacggatcca ctgagatttg
    22981 gtgtgcggga tcgctacgcc aaaaccaacg ccggtggtaa caatctcttc ccgctgccag
    23041 acatcttctt ccagctcaaa cggatgttca gtgcgcccgt taacgccgag gttgccgcac
    23101 aggaactgga tcgcctgctc tttattgcta aaatcctgat caacaaagat attctccagc
    23161 gccagcagtg ggcgaacgtc ttcttccggc gtaaaggcgg tgagtaacgc ttcaatttcc
    23221 tgcgcactgc ggcattcaca tgcctgacgc gccagttccc gacacgcctc gctatccagt
    23281 tgacgaagct ggcttttcac cgccggaata cgcgggctac tcatactcag ctcatccagg
    23341 cccagcccaa gcagtagcgg cagataacgg ctttcaccgc ccagttcacc gcaaatgcct
    23401 acccatttgc cccgctgatg cgcagtggta actatttgct gcaacatgcg caggaacgat
    23461 ggcgtaatcg ggttatatag cggcgatacg cgcgggttat tacgatcgac cgcatacaga
    23521 tactgggtca tatcgttgga gccgatactg aagaaatcga cctcatcgca gaagtggtcg
    23581 atgatgtagc acaccgacgg cacttccacc atgatcccaa gcgtaatcgt ctctgcatga
    23641 cgcaggccat cgcgcttaag ctcaacgatc gctttttgga tctcgccctt cacccataag
    23701 atctgatcga gactgtggac catcgggatc atcaactggg cgttgccaaa actggcggcg
    23761 cgcaaaatcg cccgtagttg agtgcggaac aggccagcaa attccgggta aatacgtacc
    23821 gcgcgatagc cgaggaacgg gttctcttcc tggggaatat tcagataagg aatgctttta
    23881 tcgccaccga tgtccattgt gcggaagata atcggcttgt cgcccgctgc cagtagcacc
    23941 tgctggtagg cttcaaattg ctcctgctcg tccggcgcgc tgtcgcgatc catatagagc
    24001 atttcagtac ggaacagtcc aacgccttcc gcgccgttgg caaacgcgcc tggcgcttcc
    24061 agagcggtgc cgatattcgc cgcaatatca atacgcttgt tatcacggga ataggccagc
    24121 tgcgcggcgg cctgcgcctg ttgtttttgg cgtttatccg ccagcgtctg tgcgacctga
    24181 taataaccgc tcaccgcgtc attcgggtta atcgccagca cgccgcactg ggcgtcaagc
    24241 accgccggtt gcccggcata acgggcaatc gcatccagcg gcaggccgct cagtaccggg
    24301 atcgccgagg cgcgggccag aatcagggta tgcgaggtgc gcccagtttt ctccagaatc
    24361 atgcctgcaa gattttttaa atcgaggctc aaaaactggc ttggggttaa atcctcggct
    24421 accagaatag tcggtttttc cagcaccaga ttgttgcgcg gcttcagttc cggccaggtg
    24481 atatgcagca actgttcgct aatatcgcga atgtcgctaa cacgttcgcg cagataatca
    24541 ctggcagaag cagaaagttt ggcgcaaacc tgctccatat tgctgatgat cgccgccccc
    24601 agcccttgat gctgttctgt catcagacga cggatattgc ccgcgaattc atcatcctga
    24661 atcagcgaca aatgggcgct aaggatagtt ttgctttcgc cgtcactctc acgcaattgc
    24721 tggttcagtt gctcggcaag cgttgcaagg ctgtgctcca gccgggtgga atcttgcgca
    24781 ctggcgggga ttgcccgata actgtcgagg ctgtcgcttt gtaacagggt cagcgtaccc
    24841 acgccgacgc tgcttgccag cacattgccg tacagtaaat ccgggttcag gcggcttaat
    24901 gaacgcggca gcggatgcgc cgtcagttct gcctgcgttg gctggatgct gtcgctgtcg
    24961 ataaagcgca cctggatgta ctcttccaac acgcgctgcg cctgctcttc atcgctgccg
    25021 ctaatgttca ggctgcaact gtcattaaat aaagtaccgg tgccaatcag cgccagcgag
    25081 cttttcgcat cggcctttgc gttctggcga tggttgataa aggtgatttc gctttgccac
    25141 tggctgcact gttctttaag ttcccacgcc ggacgagcat gaagaccgtt tggcaaagga
    25201 cagagaaatt gaatcgttaa cataaccgct ccgggttaat caggagatca tctgaaatcc
    25261 gtcagttgaa caaccgtctc acgcgtaaga cgtttaataa gggcagataa aagctgctgc
    25321 atctgcaaaa tgtcacggca atcggcaatc gatgcggcgc aatgtccgtg gcgggttgct
    25381 ggccccatca ccactgtagg cacgccggtg ccggttaagt gcaccgctcc gccgtccgtg
    25441 ccgccgttgc tgaacatatc tgcctgtaac ggcacgccaa tttctgccgc cacggtttcg
    25501 atccacgcgg taagttttgg cggcgcaatc agcgacttgt cgcttaacac cagcatcggc
    25561 ccgttacaaa tctgacgatg gttagccgcg ccataatcaa agtttttcgc ccagcaggcg
    25621 gtatcaagca caatggcgac atccggcgac accgcgcggg tggcagtttg cccgccgcgt
    25681 acccccacct cttcgctgga actggccacc agccacactt ccgcaggcag ttcagcgctg
    25741 tgtagttcgc gcagtaacgt caccagcagg tagcaaccga ggcggtcatc aaaggctttc
    25801 cccatcaccc gctggtgagg gagaacctga aaagttgtat caaaggtgac gcgatcgcct
    25861 ggacgaattc ccgcctgcat cacttcgtca tacgagcgcg taccaatgtc cacgcgcatg
    25921 gcgctgacgt cattcccctg ccggtcgccg tcaagcaggc ctggaatttt gcactcttca
    25981 cgggtggtga tgcgcaccgg ctgcagctgg cgggcagcca tgcgcacgtt gccaaccggc
    26041 agcacatcaa ttgccccttc gcgggagatg ctgcgcacca taaatcccac ttcgtccata
    26101 tgggcgcaga tcatcacctt cggccctgtc gattcattga ggcggatcag caccgatccc
    26161 agaccatcaa atcgcacttc tttttgcagg cgatccgctt cttccagcag gatctgccgc
    26221 acttcctgtt ccgaggaggc gatcgcatct gcctcgctca acgcttttaa tagcgataaa
    26281 tccattatgc ctctcccgtg agcaacactg ttttcggcat ggcgtagagc acttctgcgc
    26341 cttgcggggt aaccagcaca acatcttcga tgcgcacgcc cccttgccct ggcaaataaa
    26401 tccccggctc cacggtcagc aacatgcctg gctgtagcgt cgtggtgtcc cgcggtgaaa
    26461 aacgcggatc ttcatggact tcaatgccga tagcgtgacc agtgttatga ccgaaatagt
    26521 cgccaaatcc agcctcggta atgacccggc gcgcggcgtc gtcaatctgc tggcagcgca
    26581 cgccggggcg aattgcagag attgccgcga gctgtgcctg caggacaatc tgatagacgt
    26641 caaacagcgg gtgagattcg gcgctcaccc cttcgccatt caccagcaag gtgcgcgtca
    26701 tatcagagca gtagccctga tacagcgcac caaaatcgag agtgacaaac tcgcccgctg
    26761 caacaatctt gtcgctggct ttgccgtgcg gcagcacccc gcgccagccg ctggcgacaa
    26821 tggtgtcaaa agaggctttt tctgcgccct gctggcgcat aaaccactcc agttcagcgg
    26881 ctatctcgcg ctcgctcatc cccgcctgaa taaagcggcg aatatgctcc gctccgcgat
    26941 cggcaatccc acaggcgagg cggattatct ccacctcctc tggcgttttg atttgccgca
    27001 gcacatccgg cgtggcgcta accagtttcg cattgagttc agacttccag cggtgcgcgg
    27061 tttcccaact cacctgctgg ccttcaaaac cgagcgtttg caactgctca tcggcaatga
    27121 tttgattgac gatagtggta agcgtgttcg tcgcgtcaag caaatgcagc tggtagcctt
    27181 gcgcacgggc ttccacctca acgaaatagc tcgaatctac cagaatgtgc gcactttcac
    27241 ggctaataac cacatagcct gatccggtgg agatccccag atgcggctgt ttgttctgcc
    27301 gtgaggagag aagcactgca tccagttgtt gctccttaag ccagtcgcgc agcgaagcga
    27361 gtaatgtcat ctggattttc cttcttacag gctatcgatt aacaatttgc ctttacggaa
    27421 catcatcaga cgcaggaaca ccaccatcag cgcagttatg actgccccca gcgcgatccc
    27481 cgccatatag acgccaaggt tagtgaccag cggccatgcc cagatagcgg attccgggaa
    27541 ccattgcact gcgcccagcc agacagcggc ggttgagccg acaatcgcgc cgaccatata
    27601 cgacggaatg gcggtgatgg ggctttccag cgcaaacgga atcgcaccct cactaatccc
    27661 cataaaggca aggaacatcg cggtcttacc ctgcggataa agttgagcgt tgaacaggcg
    27721 tttgccggtt aaacgacggt caataatggt cgccagcccc agaccaatcg gaggaataac
    27781 gatagcgata gaacgagcgg tgaccggtaa tacgtggtca gtggtaaagc tgaaggcaac
    27841 gaaacctgcg gctttgttga tcgggccacc aaggtcgatt gctgtcgccg cggcgatccc
    27901 cattgcgtac atcagcgcgc ccttctcacc tgcggcagtc agcacggtac ggataacgcc
    27961 gttgatccag ccgccaaagg gggtaatgac gtagtacatc gccagcatga caaaaatggc
    28021 ggaaagaatc ggtagcaaaa atgtggtttt gaacgctaac aggaaatccg gtaactggat
    28081 tttctggttc atccacttca caaggtaacc cgcgacgata gaaataatca gcgcaccaat
    28141 gaaggtggac ggcaccggcg aagaggtcgc ccattgcata gtgctgggat cgaagttcag
    28201 cagttgcgtc ggctgggtag acatcaagcc gccgataaaa ccagccggga acgccagttt
    28261 gccaccgata gagttcgcca caaaagcagc aaacatcgga atggcaaaac caaacaacac
    28321 gccgccgaag gactgcgaca gccaggcaaa tttcagtaag gagaggtcga aaccggagaa
    28381 tttcccgcta ttaagagcat ccatgatgcc gatctcagca ggaattttaa gccagctata
    28441 agcaatcagc tggctgaaag cgaggatcac accgcccata attaaggtcg gcaccatgcg
    28501 tgaaatccct gacatcacat gctgcgggag ttcaccccag aagctgcttt tagaggcctg
    28561 cggattctta actgccgctg ccgcaccgga tgcgccaggc acaacggttg cactgcgttt
    28621 tttaatggcc ataacaatta tccctgtcga atattactgt tgttcagagg caatcatctc
    28681 ttcgatttct ttgatgatgc ccgcagcgtt tttaattgcg tcctgcaaag tgatttcata
    28741 aacgtcgcgt gattcgaaac gctcattatc ttccggggta actgccacgg agtggatgat
    28801 gatggttgct tcggcgatat cctgcgccgt caggcgattc tggataccgt ccgcgccctg
    28861 ggtttcaatt ttcacttcat aaccggcttc taccgccgct tcttccaacg cctgagcggc
    28921 cataaaggtg tgagccaggc ccattgggca ggcacataag gcaatcagtt tcttactcat
    28981 cgttaattcc tcattcagtg atagttgaca agtgaaatta tgaacgtgca aaacaaatcg
    29041 ccgttaccag acaaataatg catttactgg agaattaatc ccgctgtacg gaagtgtgac
    29101 gcaggtcggc cttgtgaggg gacacaaaga aaaattgaat taactgtatg atttaaacga
    29161 ttatcgggag agttacctcc cgatataaca ggaaggattt acagaatgtg ccctaaggtc
    29221 tggcgtaaat gtgcaccgga accgagaaga cccggattgt catggacgat gagatacacc
    29281 ggaatatcat ggacatattc tttaaagcgc cctttatctt caaatgcagc acggaaacca
    29341 gaggctttga agaactcaag gaagcgcggc acgataccgc ccgcaataaa cacgccgcca
    29401 aatgtcccga gattgagcgc cagattgccg ccaaaacggc ccataatgac gcaaaacagc
    29461 gacaacgcgc ggcggcaatc ggtacagctg tcagccagcg cgcgttcggt aatatctttt
    29521 ggcttgagat tttctggcag gcggttgtca gctttcacaa ttgcgcgata caaattcacc
    29581 agcccagggc cagaaagcac gcgctccgcc gaaacatgac caatttccgc acgcaatatt
    29641 tcgaggataa tggcctcttc ttcactattc ggcgcaaaat caacgtgacc gccttcgccc
    29701 ggcaagctta cccaacgctt atcgacatgg accagatgcg caaccccaag ccctgttccg
    29761 gcaccgtaaa ccgcaatagg tttaccttct accggttctg cgccaccaaa ctgaatcaga
    29821 tgctcttttt tcagcatcgg gatcgccatc gatacagcgg taaaatcgtt aataatttcc
    29881 agatggctaa aaccgagatt ctttttcatt tcggcaattg agaacgccca ggtatggttg
    29941 gtcattgcca cccagtcacc ggtaattggg caagcgatgg caatacagcc gtctttcacc
    30001 tcgaccttat gttcttcaag ataaacgcga atgaccgctt cgaggctggg gtaatcaagc
    30061 cctgaatagg tcttagcctg cgagatttca ccactggcaa tatcacacag agcaagacgt
    30121 gcgttggtgc cgcccacatc accgactaat gcatacttta tcattcttca actgctccgc
    30181 taaagtcaaa ataattcttt ctcacactgt aaatacctgg gggcataaca acaacgccgg
    30241 aaaggcaggc tccctgtaaa tatcgatctg ggtcacacat ttactttatc gtttcagcac
    30301 caattgcagc gatgcctttt tgcaagctgg gcaaactaag tatctgaccc cgcataagga
    30361 atagaacatg ctccatccgc gagccagaac catgttgtta ttatcgctcc ccgccgtggc
    30421 aattgggatt gcgtccagtc ttattctgat tgtggtgatg aaaatcgcct cggtattaca
    30481 gaatttgctc tggcaacgac tgccgggaac tctggggata gcccaggatt cacctctctg
    30541 gatcatcggt gtattaacgc taacgggtat tgcggtgggg ttggttatcc gtttcagcca
    30601 gggtcatgcc ggaccagacc ccgcctgtga accgctgatc ggcgcaccag ttccgccctc
    30661 tgcgctacca ggacttatcg tagcattaat tctcggtctt gctggcggcg tcagcctggg
    30721 gccggaacat ccgatcatga ccatcaatat cgcccttgcc gtcgccattg gcgctcgtct
    30781 gttaccgcgc gtcaaccgaa tggagtggac tattttagcc tctgccggaa ccatcggcgc
    30841 gctgtttggc acacctgttg cagcggcgtt gatattttcg caaaccttaa atggcagtag
    30901 tgaagttccg ctatgggatc gtctctttgc gccgttaatg gcggcagcag ctggtgcact
    30961 aactaccgga ttatttttcc atccccattt ttcactgccc attgcgcatt acggacagat
    31021 ggaaatgacc gatattctca gcggtgcaat tgtcgcggcg attgccatcg cagcagggat
    31081 ggtcgccgta tggtgcttac cacggttgca cgcgatgatg aatcaaatga aaaatccggt
    31141 gctcgtgctg ggtattggcg gatttattct cggtattctg ggggttattg gtggaccagt
    31201 ttcgctgttt aaagggctgg atgagatgca gcagatggtg gcaaatcagg ctttcagcac
    31261 cagcgattac tttttgctgg cggtaattaa acttgccgcc ctggtcgttg ctgccgccag
    31321 tggctttcgc ggtgggcgaa tcttcccggc agtgtttgtc ggcgtggcat tagggttgat
    31381 gctgcatgag cacgtacccg ccgtaccagc ggcaataacc gtttcttgcg ctattctcgg
    31441 catcgtgctg gtggtaacac gcgatggctg gttaagtctt tttatggcgg cggtcgttgt
    31501 acccaatacc acattgctac cgctgctctg tatcgtcatg cttccggcat ggctgttatt
    31561 agcaggtaag ccgatgatga tggtcaatcg tccgaagcaa cagccacccc acgataacgt
    31621 ttagcaaaaa atgctctcct ttatgattta agagttatgg cgatgatacg gggctttacc
    31681 tccccgtaat attgcgttaa caggccgctg acggcttcga tcgtgaagga gaataacaat
    31741 gttcaggtca ctgtttctgg cggccgccct gatggcattt accccgcttg cagcaaacgc
    31801 aggtgaaatc accctactgc catcaatcaa attacaaatt ggcgatcgcg atcattacgg
    31861 taattactgg gacggtggtc actggcgcga ccgtgactac tggcatcgca attatgagtg
    31921 gcgcaaaaac cgttggtggc gtcatgataa tggctatcat cgtggctggg ataagcgtaa
    31981 agcgtatgag cgtggctatc gtgaaggctg gcgcgatcgt gacgatcatc gcggaaaagg
    32041 ccgcggacat ggacaccgcc attaaacaca ttcgccaatg gagcacaatg cctgatgcga
    32101 cgctagcgcg tcttatcagg cctacaaacc ggatctttaa cgcgtagggc ggataaggcg
    32161 tttacgccgc atccgccaat agtgccagat gcgacgctca ttcaactaca atcccagcgc
    32221 cgtccccacc aacaaccaga tattcagcgc cacgaccagc actacaatca cccagcctgt
    32281 ctgttttacg cgtttgctgt tcaccagatc gcccatcaac ttgctgtcac tggtgaaaat
    32341 cagcagtgga accagcgcca gggcgatacc aaaacttaac agcacctgac tcataaccag
    32401 aatccgtgtc ggatctaatc ccatcagaat gacaataaat gacggcagca tggtgactgt
    32461 acgacgcacc cacagcggga tatggaagcg aatgaacccc tgcatcacca cctgccctgc
    32521 cagtgtcccc actaccgttg aggacagtcc ggcagcaacc agacttaacc caaagaccgt
    32581 tgccgcagca tggcttaaca gcggttgcag cgtcagataa gcctcatcaa gatcggcaac
    32641 accagtatga ccagaaaagt ggaacgccgc cgcagctgta gccatcatcg ccagattgac
    32701 aaaaccggca atagtcatgg cgatagccac atcccatttg gtggcggaat aacgttgttg
    32761 acgcgaaccg ccatgtaaat gctgagtgag cgaggagtgc aaataaatca catgcggcat
    32821 aatcgtcgcc cctaacacgc ctgctgccag gaagaccgct tccgaagtag gtaaactcgg
    32881 gatcaccatt cctttaccca gctgcgccag gttaggctgg gagaaaatca actcgacaat
    32941 gtaagccgcg gcaacaaaca acagtaaccc gccaatcact ttctccagcg gtttttgccc
    33001 gcgacgttgc agcattaaaa tcaggaaagt cgcgatcccc gtcagcaccg cgccctgcaa
    33061 caacgaaaca ccaagaatga gtttaaaacc gatcgccgca ccaataaatt ccgccaggtc
    33121 ggttgccatc gcaataattt ctgcctgaac ccaatagaac cacactacgg gacgcggata
    33181 gtgatcgcga atctgctccg ccagattttt accggtggca atccctagtt tggcagagag
    33241 gatctgaatc agcatcgcca tcaggttggc ccaaacgaca acccacagta gctgatagcc
    33301 gaagctggca cccgcctgaa tattggtcgc aaagttaccg ggatcgatat aaccaatcgc
    33361 cgcaatgaac gcaggtccca ttaatgcgag cctcatcttg cgcgccgccc gtccgctgct
    33421 actctcaacg cgatagttcg tcatcttgtg cctctaaaac atagcctttg ctatgtttca
    33481 tgctatgata aacgagaatg attatcaaat tcatttaaat ggattgtggt gatttctgtg
    33541 atagaccagg attatgacta cgaaaagatt gatgacttga atgttatggt tatgtttaat
    33601 gttagcacat ttacataact ttcagcttcc atacacaaca tagcagaaat gtatgacaga
    33661 tcactatttt tgaagcctgt cacaggacgt cattatagtg tgtgtcagat ctcgttttcc
    33721 ttaaccatgt tacatagaat gtgcacggaa atttaacctg cctcatattt ggagcaaata
    33781 tggaccgcgt ccttcatttt gtactggcac ttgccgttgt tgcgattctc gcactgctgg
    33841 taagcagcga ccgcaaaaaa attcgtatcc gttatgttat tcaactgctt gttatcgaag
    33901 tgttactggc gtggttcttc ctgaactccg acgttggttt aggcttcgtg aaaggcttct
    33961 ccgaaatgtt cgaaaaactg ctcggatttg ccaacgaagg gactaacttc gtctttggta
    34021 gcatgaatga tcaaggcctg gcattcttct tcctgaaagt gctgtgccca atcgtcttta
    34081 tctctgcact gatcggtatt ctccagcaca ttcgcgtgtt gccggtgatc atccgcgcaa
    34141 ttggtttcct gctctccaaa gtcaacggca tgggcaaact ggaatccttt aacgccgtca
    34201 gctccctgat tctgggtcag tctgaaaact ttattgccta taaagatatc ctcggcaaaa
    34261 tctcccgtaa tcgtatgtac accatggctg ccacggcaat gtccaccgtg tcgatgtcca
    34321 tcgttggtgc atacatgacc atgctggaac cgaaatacgt cgttgctgcg ctggtattga
    34381 acatgttcag cacctttatc gtgctgtcgc tgatcaaccc ttaccgtgtt gatgccagtg
    34441 aagaaaacat tcagatgtcc aacctgcacg aaggtcagag cttcttcgaa atgctgggtg
    34501 aatacattct ggcaggtttc aaagttgcca ttatcgttgc cgcgatgctg atcggcttta
    34561 tcgccctgat cgctgcgctg aacgcactgt ttgccaccgt gactggctgg tttggctaca
    34621 gcatctcctt ccagggcatt ctgggctaca tcttctatcc gattgcatgg gtgatgggtg
    34681 ttccttccag tgaagcactg caagtgggca gtatcatggc gaccaaactg gtttccaacg
    34741 agttcgttgc gatgatggat ctgcagaaaa ttgcttccac gctctctccg cgtgctgaag
    34801 gcatcatctc tgtgttcctg gtttccttcg ctaacttctc ttcaatcggg attatcgcag
    34861 gtgcagttaa aggcctgaat gaagagcaag gtaacgtggt ttctcgcttc ggtctgaaac
    34921 tggtttacgg ctctaccctg gtgagtgtgc tgtctgcgtc aatcgcagca ctggtgctgt
    34981 aagaccatac ataaaaaagc cggggataat tc
//
LOCUS       DADMJE010000024        34468 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.024, whole genome shotgun sequence.
ACCESSION   DADMJE010000024 DADMJE010000000
VERSION     DADMJE010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34468
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.024"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            37..891
                     /locus_tag="JN001_001051"
     CDS             37..891
                     /locus_tag="JN001_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY9052357.1"
                     /translation="MGNGWHEWPLVIFTVLGQCVVGALIVSGIGWFAAKNDADRQRIV
                     RGMFFLWLLMGIGFIASVMHLGSPLRAFNSLNRIGASGLSNEIAAGSIFFAVGGLWWL
                     VAVIGKMPQALGKLWLLVSMALGVIFVWMMTCVYQIDTVPTWHNGYTTLAFFLTVLLS
                     GPILAAAILRAARVTFNTTPFAIISVLALIACAGVIVLQGLSLASIHSSVQQASALVP
                     DYASLQVWRVVLLCASLGCWLCPLIRRREPHVAGLILGLILILGGEMIGRVLFYGLHM
                     TVGMAIAG"
     gene            934..1548
                     /gene="dmsD"
                     /locus_tag="JN001_001052"
     CDS             934..1548
                     /gene="dmsD"
                     /locus_tag="JN001_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707489.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tat proofreading chaperone DmsD"
                     /protein_id="HAY9052358.1"
                     /translation="MTHFSQQDNFSVAARVLGALFYYAPESAEAAPLVAVLTSDGWET
                     QWPLPEASLAPLVTAFQTQCEETHAQAWQRLFVGPWALPSPPWGSVWLDRESVLFGDS
                     TLALRQWMREKGIQFEMKQYEPEDHFGSLLLMAAWLAENGRQTECEELLAWHLFPWST
                     RFLDVFIEKAEHPFYRALGELSRLTLAQWQSQLLIPVAVKPLFR"
     gene            1707..2999
                     /gene="clcB"
                     /locus_tag="JN001_001053"
     CDS             1707..2999
                     /gene="clcB"
                     /locus_tag="JN001_001053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated ClC-type chloride channel ClcB"
                     /protein_id="HAY9052359.1"
                     /translation="MHHLHIYPDLRTMFRRLLIATVVGILAAFAVAGFRHAMLLLEWL
                     FLNNDSGSLVNAATNLSPWRRLLTPALGGLAAGLLLMGWQKFTQQRPHAPTDYMEALQ
                     TDGQFDYAASLVKSLASLLVVTSGSAIGREGAMILLAALAASCFAQRFTPRQEWKLWI
                     ACGAAAGMAAAYRAPLAGSLFIAEVLFGTMMLASLGPVIISAVVALLVSNLINHSDAL
                     LYNVQLSVTVQARDYALIISTGVLAGLCGPLLLTLMNACHRGFVSLKLAPPWQLALGG
                     LIVGLLSLFTPAVWGNGYSTVQSFLTAPPLLMIIAGIFLCKLCAVLASSGSGAPGGVF
                     TPTLFIGLAIGMLYGRSLGLWFPDGEEITLLLGLTEMATLLAATTHAPIMSTLMICEM
                     TGEYQLLPGLLIACVIASVISRTLHRDSIYRQHTAQHS"
     gene            complement(2952..3647)
                     /gene="bioD"
                     /locus_tag="JN001_001054"
     CDS             complement(2952..3647)
                     /gene="bioD"
                     /locus_tag="JN001_001054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY9052360.1"
                     /translation="MLKRFFITGTDTSVGKTVVSRALLQALASQGKTVAGYKPVAKGS
                     KETPEGLRNKDALVLQSVSTIELPYEAVNPIALSEEESSVAHSCPINYTLISNGLANL
                     TDKVDHVVVEGTGGWRSLMNDLRPLSEWVVQEQLPVLMVVGIQEGCINHALLTAQAIA
                     NDGLPLIGWVANRINPGLAHYAEIIDVLGKKLPAPLIGELPYLPRAEQRELGQYIRLA
                     MLRSVLAVDRVTV"
     gene            complement(3772..4992)
                     /gene="mlc"
                     /locus_tag="JN001_001055"
                     /gene_synonym="dgsA"
     CDS             complement(3772..4992)
                     /gene="mlc"
                     /locus_tag="JN001_001055"
                     /gene_synonym="dgsA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor Mlc"
                     /protein_id="HAY9052361.1"
                     /translation="MVAENQPGHIDQIKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAP
                     ASITKIVREMLEAHLVQELEIKEAGNRGRPAVGLVVETEAWHYLSLRISRGEIFLALR
                     DLSSKLVVEESQELALKDDLPLLDRIISHIDQFFIRHQKKLERLTSIAITLPGIIDTE
                     NGIVHRMPFYEDVKEMPLGEALEQHTGVPVYIQHDISAWTMAEALFGASRGARDVIQV
                     VIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKRCYCGNLGCLETIASVDSILE
                     LAQLRLNQSMSSMLHGQPLTVDSLCQAALRGDLLAKDIITGVGAHVGRILAIMVNLFN
                     PQKILIGSPLSKAADILFPVISDSIRQQALPTYSQHISVESTQFSNQGTMAGAALVKD
                     AMYNGSLLIRLLHG"
     gene            complement(5127..6020)
                     /locus_tag="JN001_001056"
     CDS             complement(5127..6020)
                     /locus_tag="JN001_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9052362.1"
                     /translation="MNIELRHLRYFVAVAEELHFGRAAARLNISQPPLSQQIQALEQQ
                     IGARLLARTNRSVLLTAAGKQFLADSRQILSMVDDAAARAERLHQGEAGELRIGFTSS
                     APFIRAVSDTLSLFRRDYPGVHLQTREMNTREQIAPLIEGTLDMGLLRNTALPETLEH
                     AVIVHEPLMAMIPHDHPLANNPNVTLAELAKEPFVFFDPHVGTGLYDDILGLMRRYHL
                     TPVITQEVGEAMTIIGLVSAGLGVSILPASFKRAQLNEMRWVPIAEEDAVSEMWLVWP
                     KHHEQSPASRNFRIHLLNALR"
     gene            6127..6486
                     /locus_tag="JN001_001057"
     CDS             6127..6486
                     /locus_tag="JN001_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052363.1"
                     /translation="MSRTTTVDGAPASDTDKQSISQPNQFIKRGTPQFMRVTLALFSA
                     GLATFALLYCVQPILPVLSQEFGLTPANSSISLSISTAMLAIGLLFTGPLSDAIGRKP
                     VMVTALLLASICTLFRQ"
     gene            6645..7379
                     /locus_tag="JN001_001058"
                     /pseudo
     CDS             6645..7379
                     /locus_tag="JN001_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000016737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            7776..8090
                     /locus_tag="JN001_001059"
     CDS             7776..8090
                     /locus_tag="JN001_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416114.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid shock protein"
                     /protein_id="HAY9052364.1"
                     /translation="MKKQIEGMTMKKVLALVVAAAMGLSSAAFAAETATTTKAAPAKT
                     THHKKQHKAAPAQKAQAAKKHHKNTKAEQKAPEQKAQAAKKHAGKHSHQQPAKPAAQP
                     AA"
     gene            8183..8266
                     /locus_tag="JN001_001060"
     CDS             8183..8266
                     /locus_tag="JN001_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052365.1"
                     /translation="MVGRYRFEFILIILILCALIAARFYLS"
     gene            8366..9187
                     /locus_tag="JN001_001061"
     CDS             8366..9187
                     /locus_tag="JN001_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HAY9052366.1"
                     /translation="MRTTIAVVLGAISLTSAFVFADKPDVAKSANDEVSTLFFGHDDR
                     VPVNDTAQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVVLRF
                     VSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITP
                     LPLFEGDKAALTAALKSAGRKVTQAGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDT
                     LPGDSGSPLMLHTNDGWQLIGVQSSAPAAKDRWRADNRAISVTGFRDKLDQLSQK"
     gene            complement(9226..9555)
                     /gene="mdtI"
                     /locus_tag="JN001_001062"
     CDS             complement(9226..9555)
                     /gene="mdtI"
                     /locus_tag="JN001_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtI"
                     /protein_id="HAY9052367.1"
                     /translation="MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAA
                     VLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAG
                     MIMVKLA"
     gene            complement(9542..9907)
                     /gene="mdtJ"
                     /locus_tag="JN001_001063"
     CDS             complement(9542..9907)
                     /gene="mdtJ"
                     /locus_tag="JN001_001063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug/spermidine efflux SMR transporter
                     subunit MdtJ"
                     /protein_id="HAY9052368.1"
                     /translation="MYIYWILLGLAIATEITGTLSMKWASVSEGNGGFILMLVMISLS
                     YIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLI
                     KSGTRKARKPELEVNHGAV"
     gene            10319..11353
                     /gene="tqsA"
                     /locus_tag="JN001_001064"
     CDS             10319..11353
                     /gene="tqsA"
                     /locus_tag="JN001_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2 transporter TqsA"
                     /protein_id="HAY9052369.1"
                     /translation="MAKPIITLNGLKIVIMLGMLVIILCGIRFAAEIIVPFILALFIA
                     VILNPLVQHMVRWRVPRVLAVSILMTIIVMAMVLLLAYLGSALNELTRTLPQYRNSIM
                     TPLQALEPLLQRVGIDVSVDQLAHYIDPNAAMTLLTNLLTQLSNAMLSIFLLLLTVLF
                     MLLEVPQLPGKFQQMMARPVEGMAAIQRAIDSVSHYLVLKTAISIITGLVAWAMLAAL
                     DVRFAFVWGLLAFALNYIPNIGSVLAAIPPIAQVLVFNGFYEALLVLAGYLLINLVFG
                     NILEPRIMGRGLGLSTLVVFLSLIFWGWLLGPVGMLLSVPLTIIVKIALEQTAGGQSI
                     AVLLSDLNKE"
     gene            complement(11378..12766)
                     /gene="pntB"
                     /locus_tag="JN001_001065"
     CDS             complement(11378..12766)
                     /gene="pntB"
                     /locus_tag="JN001_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000014033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit beta"
                     /protein_id="HAY9052370.1"
                     /translation="MSGGLVTAAYIVAAILFIFSLAGLSKHETSRQGNNFGIAGMAIA
                     LIATIFGPDTGNVGWILLAMVIGGAIGIRLAKKVEMTEMPELVAILHSFVGLAAVLVG
                     FNSYLHHDAGMAPILVNIHLTEVFLGIFIGAVTFTGSVVAFGKLCGKISSKPLMLPNR
                     HKMNLAALVVSFLLLIVFVRTDSVGLQVLALLIMTAIALVFGWHLVASIGGADMPVVV
                     SMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFG
                     TDGSSTGDDQEVGEHREITAEETAELLKNSHSVIITPGYGMAVAQAQYPVAEITEKLR
                     ARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGAND
                     TVNPAAQDDPKSPIAGMPVLEVWKAQDVIVFKRSMNTGYAGVQNPLFFKENTHMLFGD
                     AKASVDAILKAL"
     gene            complement(12777..14309)
                     /gene="pntA"
                     /locus_tag="JN001_001066"
     CDS             complement(12777..14309)
                     /gene="pntA"
                     /locus_tag="JN001_001066"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HAY9052371.1"
                     /translation="MRIGIPRERLTNETRVAATPKTVEQLLKLGFTVAVESGAGQLAS
                     FDDKAFVQAGAEIVEGNSVWQSEIILKVNAPLDDEIALLNPGTTLVSFIWPAQNPELM
                     QKLAERNVTVMAMDSVPRISRAQSLDALSSMANIAGYRAIVEAAHEFGRFFTGQITAA
                     GKVPPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKE
                     EAGSGDGYAKVMSDAFIKAEMELFAAQAKEVDIIVTTALIPGKPAPKLITREMVDSMK
                     TGSVIVDLAAQNGGNCEYTVPGEIFTTENGVKVIGYTDLPGRLPTQSSQLYGTNLVNL
                     LKLLCKEKDGNITVDFDDVVIRRVTVIRAGEITWPAPPIQVSAQPQAAQKAAPEVKTE
                     EKCACSPWRKYALMALAIILFGWLASVAPKEFLGHFTVFALACVVGYYVVWNVSHALH
                     TPLMSVTNAISGIIVVGALLQIGQGGWVSFLSFIAVLIASINIFGGFTVTQRMLKMFR
                     KN"
     gene            14832..15776
                     /locus_tag="JN001_001067"
     CDS             14832..15776
                     /locus_tag="JN001_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY9052372.1"
                     /translation="MKLKNTLLASALLSATAFSVNAATELTPEQAAAVKPFDRVVVTG
                     RFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNR
                     VINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDA
                     NQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTA
                     SPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTE
                     VSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK"
     gene            15962..17344
                     /locus_tag="JN001_001068"
     CDS             15962..17344
                     /locus_tag="JN001_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9052373.1"
                     /translation="MEKKLGLSALTALVLSSMLGAGVFSLPQNMAAVASPAALLIGWG
                     ITGAGILLLAFAMLILTRIRPELDGGIFTYAREGFGELIGFCSAWGYWLCAVIANVSY
                     LVIVFSALSFFTDTPELRLFGDGNTWQSIVGASALLWIVHFLILRGVQTAASINLVAT
                     LAKLLPLGLFVVLAMMMFKLDTFKLDFTGLVLGVPVWEQVKNTMLITLWVFIGVEGAV
                     VVSARARNKRDVGKATLLAVLSALGVYLLVTLLSLGVVARPELAEIRNPSMAGLMVEM
                     MGPWGEIIIAASLIVSVCGAYLSWTIMAAEVPFLAATHKAFPRIFARQNAQAAPSASL
                     WLTNICVQICLVLIWLTGSDYNTLLTIASEMILVPYFLVGAFLLKIATRPLHKAVGVG
                     ACIYGLWLLYASGPMHLLLSVVLYAPGLLVFLYARKTHTHDNVLNRQEMVLIGMLLIA
                     SVPATWMLVG"
     gene            17381..18103
                     /gene="folM"
                     /locus_tag="JN001_001069"
     CDS             17381..18103
                     /gene="folM"
                     /locus_tag="JN001_001069"
                     /EC_number="1.5.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydromonapterin reductase"
                     /protein_id="HAY9052374.1"
                     /translation="MGKAQPLPILITGGGRRIGLALAWHFINQKQPVIVSYRTHYPAI
                     DGLIKAGAQCIQADFSTNDGVMAFADEVLKSTHGLRAILHNASAWMAEKLGAPLADVL
                     ACMMQIHVNTPYLLNHALERLLRGHGHAASDIIHFTDYVVERGSDKHIAYAASKAALD
                     NMTRSFARKLAPEVKVNSIAPSLILFNEHDDAEYRQQALNKSLMKTAPGEKEVIDLVD
                     YLLTSCFVTGRSFPLDGGRHLR"
     gene            complement(18100..18423)
                     /locus_tag="JN001_001070"
     CDS             complement(18100..18423)
                     /locus_tag="JN001_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlpM family protein"
                     /protein_id="HAY9052375.1"
                     /translation="MKAALGVLVVLLIGVLAKTKNYYIAGLIPLFPTFALIAHYIVAS
                     ERGIEALRATIIFSMWSIIPYFVYLVSLWYFTGMMRLPAAFVGSVACWGISAWVLIIC
                     WIKLH"
     gene            18549..19269
                     /gene="rstA"
                     /locus_tag="JN001_001071"
                     /pseudo
     CDS             18549..19269
                     /gene="rstA"
                     /locus_tag="JN001_001071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416125.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RstA"
     gene            19273..20574
                     /gene="rstB"
                     /locus_tag="JN001_001072"
     CDS             19273..20574
                     /gene="rstB"
                     /locus_tag="JN001_001072"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RstB"
                     /protein_id="HAY9052376.1"
                     /translation="MKKLFIQFYLLLFVCFLVMSLLVGLVYKFTAERAGKQSLDDLMN
                     SSLYLMRSELREIPPHDWGKTLKEMDLNLSFDLRVEPLSKYHLDDISMHRLRGGEIVA
                     LDDQYTFLQRIPRSHYVLAVGPVPYLYYLHQMRLLDIALIAFIAISLAFPVFIWMRPH
                     WQDMLKLEAAAQRFGDGHLYERIHFDEGSSFERLGIAFNQMADNINALIASKKQLIDG
                     IAHELRTPLVRLRYRLEMSDNLSAAESQALNRDISQLEALIEELLTYARLDRPQNELH
                     LSEPDLPLWLSTHLADIQAVTPDKTVRIKTLVQGHYAALDMRLMERVLDNLLNNALRY
                     CHSTVETSLLLSGNRATLIVEDDGPGIAPENREHIFEPFVRLDPSRDRSTGGCGLGLA
                     IVHSIALAMGGTVNCDTSELGGARFSFSWPLWHNIPQFTSA"
     gene            20650..21579
                     /gene="tus"
                     /locus_tag="JN001_001073"
     CDS             20650..21579
                     /gene="tus"
                     /locus_tag="JN001_001073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication terminus site-binding protein"
                     /protein_id="HAY9052377.1"
                     /translation="MARYDLVDRLNTTFRQMEQELAAFAAHLEQHKLLVARVFSLPEV
                     KKEDEHNPLNRIEVKQHLGNDAQSLALRHFRHLFIQQQSENRSSKAAVRLPGVLCYQV
                     DNLSQAALVSHIQHINKLKTTFEHIVTVESELPTAARFEWVHRHLPGLITLNAYRSLT
                     VLHDPATLRFGWANKHIIKNLHRDEVLAQLEKSLKSPRSVAPWTREEWQRKLEREYQD
                     IAALPQNAKLKIKRPVKVQPIARVWYKGDQKQVQHACPTPLIALINRDNGAGVPDVGE
                     LLNYDADNVQHRYKPQAQPLRLIIPRLHLYVAD"
     gene            complement(21576..22979)
                     /gene="fumC"
                     /locus_tag="JN001_001074"
     CDS             complement(21576..22979)
                     /gene="fumC"
                     /locus_tag="JN001_001074"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HAY9052378.1"
                     /translation="MNTVRSEKDSMGAIDVPADKLWGAQTQRSLEHFRISTEKMPTSL
                     IHALALTKRAAAKVNEDLGLLSEEKASAIRQAADEVLAGQHDDEFPLAIWQTGSGTQS
                     NMNMNEVLANRASELLGGVRGMERKVHPNDDVNKSQSSNDVFPTAMHVAALLALRKQL
                     IPQLKTLTQTLSEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYS
                     LPHVAELALGGTAVGTGLNTHPEYARRVADELAVITCAPFVTAPNKFEALATCDALVQ
                     AHGALKGLAASLMKIANDVRWLASGPRCGIGEISIPENEPGSSIMPGKVNPTQCEALT
                     MLCCQVMGNDVAINMGGASGNFELNVFRPMVIHNFLQSVRLLADGMESFNKHCAVGIE
                     PNRERINQLLNESLMLVTALNTHIGYDKAAEIAKKAHKEGLTLKAAALALGYLSEAEF
                     DSWVRPEQMVGSMKAGR"
     gene            complement(23122..24768)
                     /locus_tag="JN001_001075"
     CDS             complement(23122..24768)
                     /locus_tag="JN001_001075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000066594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HAY9052379.1"
                     /translation="MSNKPFHYQAPFPLKKDDTEYYLLTSEHVSVSEFEGQEILKVAP
                     EALTLLARQAFHDASFMLRPAHQQQVADILRDPEASENDKYVALQFLRNSDIAAKGVL
                     PTCQDTGTAIIVGKKGQRVWTGGCDEAALARGVYNTYIEDNLRYSQNAPLDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCIAKGGGSANKTYLYQETKALLTPGKLKNYLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAKYYDELPTEGNEHGQAFRDVELEKEL
                     LIEAQNLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINRQGIW
                     IEKLEHNPGKYIPEELRKAGEGEAVRVDLNRPMKEILAQLSQYPVSTRLSLNGTIIVG
                     RDIAHAKLKERMDNGEGLPQYIKDHPIYYAGPAKTPEGYASGSLGPTTAGRMDSYVDQ
                     LQAQGGSMIMLAKGNRSQQVTDACKKHGGFYLGSIGGPAAVLAQGSIKSLECVEYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIQLTQCTRCVK"
     gene            24967..26142
                     /gene="manA"
                     /locus_tag="JN001_001076"
     CDS             24967..26142
                     /gene="manA"
                     /locus_tag="JN001_001076"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416130.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HAY9052380.1"
                     /translation="MQKLINSVQNYAWGSKTALTELYGMENPSSQPMAELWMGAHPKS
                     SSRVQNAAGDIVSLRDVIESDKSTLLGEAVAKRFGELPFLFKVLCAAQPLSIQVHPNK
                     RNSEIGFAKENAAGIPMDAAERNYKDPNHKPELVFALTPFLAMNAFREFSEIVSLLQP
                     VAGAHPAIAHFLQQPNAERLSELFASLLNMQGEEKSRALAILKSALDSQQGEPWQTIR
                     LISEFYPEDSGLFSPLLLNVVKLNPGEAMFLFAETPHAYLQGVALEVMANSDNVLRAG
                     LTPKYIDIPELVANVKFEAKPANQLLTQPVKQGAELDFPIPVDDFAFSLHDLSDKETT
                     ISQQSAAILFCVEGDATLWKGSQQLQLKPGESAFIAANESPVTVKGHGRLARVYNKL"
     gene            26243..27751
                     /locus_tag="JN001_001077"
     CDS             26243..27751
                     /locus_tag="JN001_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdgA family protein"
                     /protein_id="HAY9052381.1"
                     /translation="MNKSLVAVGVIVALGVVWTGGAWYTGKKIETHLEDMVAQANAQL
                     KLTAPESNLEVSYQNYHRGVFSSQLQLLVKPIAGKENPWIKSGQSVIFNESVDHGPFP
                     LAQLKKLNLIPSMASIQTTLVNNEVSKPLFDMAKGETPFEINSRIGYSGDSSSDISLK
                     PLNYEQKDEKVAFSGGEFQLNADRDGKAISLSGEAQSGRIDAVNEYNQKVQLTFNNLK
                     TDGSSTLASFGERVGNQKLSLEKMTISVEGKELALLEGMEISGKSDLVNDGKTINSQL
                     DYSLNSLKVQNQDLGSGKLTLKVGQIDGEAWHQFSQQYNAQTQALLAQPEIANNPELY
                     QEKVTEAFFSALPLMLKGDPVITVAPLSWKNSQGESALNLSLFLKDPATTKEAPQTLA
                     QEVDRSVKSLDAKLTIPVDMATEFMTQVAKLEGYQEDQAKKLAKQQVEGASAMGQMFR
                     LTTLQDNTITTSLQYTNGQITLNGQKMSLEDFVGMFAMPALNVPAVPAIPQQ"
     gene            complement(27977..29242)
                     /gene="uidC"
                     /locus_tag="JN001_001078"
     CDS             complement(27977..29242)
                     /gene="uidC"
                     /locus_tag="JN001_001078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide uptake porin UidC"
                     /protein_id="HAY9052382.1"
                     /translation="MRKIVAMAVICLTAASGLTSAYAAQLADDEAGLRIRLKNELRRA
                     DKPSAGAGRDIYAWVQRGLFDFNSGYYSNIIGVEGGAYYVYKLGARADMSTRWYLDGD
                     KSFGFALGAVKIKPCENSLLKLGRFGTDYSYGSLPYRIPLMAGSSQRTLPTVSEGALG
                     YWALTPNIDLWGMWRSRVFLWTDSTTGIRDEGVYNSQTGKYDKHRARSFLAASWHDDT
                     SRYSLGASVQKDVSNQIQSILEKSIPLDPNYTLKGELLGFYAQLEGLSRNTSQPNETA
                     LVSGQLTWNAPWGSVFGSGGYLRHAMNGAVVDTDIGYPFSLSLDRNREGMQSWQLGVN
                     YRLTPQFTLTFAPIVTRGYESSKRDVRIEGTGILGGMNYRVSEGPLQGMNFFLAADKG
                     REKRDGSTLGDRLNYWDVKMSIQYDFMLK"
     gene            complement(29281..30654)
                     /gene="uidB"
                     /locus_tag="JN001_001079"
     CDS             complement(29281..30654)
                     /gene="uidB"
                     /locus_tag="JN001_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronide transporter"
                     /protein_id="HAY9052383.1"
                     /translation="MNQQLSWRTIVGYSLGDVANNFAFAMGALFLLSYYTDVACVGAA
                     AAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTD
                     WSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFV
                     CLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVRIVAQPSLK
                     ISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYERYVLNDTGLFTVLVLVQNLVG
                     TVASAPLVPGMVARSGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQG
                     VTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGYI
                     ANQVQTPEVIMGIRTSIALVPCGFMLLAFVIIWFYPLTDKKFKEIVVEIDNRKKVQQQ
                     LISDITN"
     gene            complement(30651..32451)
                     /gene="uidA"
                     /locus_tag="JN001_001080"
                     /pseudo
     CDS             complement(30651..32451)
                     /gene="uidA"
                     /locus_tag="JN001_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416134.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucuronidase"
     gene            complement(32839..33429)
                     /locus_tag="JN001_001081"
     CDS             complement(32839..33429)
                     /locus_tag="JN001_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY9052384.1"
                     /translation="MMDNMQTEAQPTRTRILNAAREIFSENGFHSASMKAICKSCAIS
                     PGTLYHHFISKEALIQAIILQDQERALARFREPIEGIHFVDYMVESIVSLTHEAFGQR
                     ALVVEIMAEGMRNPQVAAMLKNKHMTITEFVAQRMRDAQQKGEISPDINTSMTSRLLL
                     DLTYGVLADIEAEDLAREASFAQGLRAMIGGILTAS"
     gene            complement(33658..34425)
                     /gene="hdhA"
                     /locus_tag="JN001_001082"
     CDS             complement(33658..34425)
                     /gene="hdhA"
                     /locus_tag="JN001_001082"
                     /EC_number="1.1.1.159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-alpha-hydroxysteroid dehydrogenase"
                     /protein_id="HAY9052385.1"
                     /translation="MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDIN
                     ADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGPK
                     PFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYA
                     SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRL
                     GQPQDIANAALFLCSPAASWVSGQILTVSGGGVQELN"
BASE COUNT         8416 a         8904 c         8369 g         8779 t
ORIGIN      
        1 ccactggtta tctggctaat ccggaggaag tgtaaaatgg gaaatggatg gcatgaatgg
       61 ccactggtta tctttaccgt attgggtcaa tgcgtagtag gcgcgctgat tgttagcgga
      121 attggctggt tcgccgccaa aaatgacgca gaccgtcagc gtattgtccg tggcatgttt
      181 ttcctctggc tgttgatggg catcgggttt attgcctctg tcatgcacct gggatcgcca
      241 ctgcgagcgt ttaactcgct gaatcgaatc ggagcttctg gtctgagtaa cgagattgct
      301 gccggttcca tattttttgc cgttggtgga ctatggtggc tggtggcggt catcggtaaa
      361 atgccgcaag cgttggggaa actctggtta cttgtcagca tggcgctcgg cgtcattttc
      421 gtctggatga tgacctgcgt gtatcaaatc gacaccgtgc caacctggca taacggttac
      481 actacgctgg ctttcttcct gacggtattg ttgagcggtc caatacttgc tgccgcaatt
      541 ctgcgggcag ctcgcgttac atttaatacc acaccatttg ccatcattag cgttctggcg
      601 ctgatcgctt gtgccggggt gattgtgctg caaggtttgt ctctggcgtc tattcactca
      661 tccgtgcaac aagccagcgc actggtacca gattacgcct ccttacaggt ctggcgtgtg
      721 gtattgttat gcgcaagtct tggatgctgg ctttgcccgc tcattcgtcg ccgtgaacct
      781 cacgttgccg gacttattct ggggctaatc ctcatacttg gcggtgagat gatcgggcgt
      841 gtgctctttt atggcctgca catgacagta ggaatggcta ttgcaggtta acaaattggt
      901 gcggggcaac ccgcacattt caggatgtta ggaatgaccc atttttcaca gcaagataat
      961 ttttctgtcg cggcgcgcgt gttgggcgcg ctgttttatt acgctccaga gagtgcggaa
     1021 gccgcacctc tggttgcggt actcaccagt gacggctggg aaactcagtg gcctctacca
     1081 gaagcgtcat tagcgccgct ggtgacggct tttcagacac agtgtgaaga gactcacgcc
     1141 caggcctggc agcgtttgtt tgtcggcccg tgggcactgc cgtctccgcc gtgggggtcg
     1201 gtctggctgg atcgcgaatc tgtgctgttt ggcgattcaa cattggcact tcgtcagtgg
     1261 atgcgcgaga aaggcattca gtttgaaatg aagcaatacg aaccggaaga tcattttggt
     1321 tcactgctgt tgatggctgc gtggttggcg gagaatggtc gccagacaga atgcgaagaa
     1381 ttgctggcat ggcacctttt tccgtggtca acacgttttc ttgatgtttt tatcgaaaaa
     1441 gcagaacacc ctttctaccg tgcactgggt gaactgtctc gcttaacgct ggcgcaatgg
     1501 caatcacaac tgttaattcc tgtcgcggtt aaaccgctgt ttcgatagga tcaccgtaat
     1561 attgccggat ggtgacgatt acgcgcaatc cggcaataat aggttacagt gtcacgtttt
     1621 tttatctctt aaagcacgca ctgcttttgc ggctggcctc ttttgccgca aaatagtcgc
     1681 ccgtgtttca ttgcccattt ctgctcatgc atcatctaca catctatccg gatctgcgca
     1741 ctatgttccg ccgtctgctt atcgcaacag tcgtcggtat tctcgcggcc tttgccgttg
     1801 ccgggtttcg tcatgcgatg ctgctactgg agtggttgtt cctcaataat gactccggca
     1861 gtctggtcaa tgcagcgaca aacctttccc cctggcgacg gttgctaact ccggcgctcg
     1921 gcggactggc ggcgggtttg ttgctgatgg gctggcagaa atttacccaa caacgccctc
     1981 atgcgccgac cgattacatg gaagcgttgc aaaccgatgg acagttcgat tacgcagcaa
     2041 gcctggttaa atcgcttgcc tcgctgctgg tagtaaccag cggcagtgca attggtcgcg
     2101 aaggtgcgat gattctttta gctgcccttg ccgcctcctg ttttgcccaa cgttttacgc
     2161 cacgccagga gtggaaatta tggatcgcct gtggcgccgc ggcgggaatg gctgcggcct
     2221 atcgtgcccc gcttgctggc agtttattta tagccgaagt gctgtttggc actatgatgt
     2281 tggcctctct cggcccggtg attatttccg ccgtcgtggc attgctggtt agcaatctga
     2341 ttaatcatag cgacgcgtta ctctacaacg tacaactctc agtgacggtt caggctcgtg
     2401 actatgcgct gattatcagt acaggtgtgc tggcaggtct gtgcggacca ctgttgttaa
     2461 cgttaatgaa cgcctgtcat cgtggatttg tgagtctcaa acttgcgccg ccctggcaac
     2521 tggcactagg cgggttgatc gtgggtctgc tttccctgtt cacacctgca gtgtggggca
     2581 acggctatag caccgtacaa tcctttttaa ccgccccacc actgttaatg atcattgccg
     2641 ggatcttcct ttgtaaactg tgtgccgtgc tggcgagtag cggttccggc gcacccggtg
     2701 gtgtctttac accgacgcta tttatcggtc ttgccattgg catgttgtat ggtcgtagcc
     2761 tgggattatg gttccctgat ggcgaagaaa ttacgctttt actcggattg accgagatgg
     2821 cgacactgtt ggcggcaacc acgcacgcgc cgattatgtc gacgttgatg atatgtgaaa
     2881 tgaccgggga gtatcagcta ctccccggtt tattgattgc ctgcgtcatt gcgtcggtaa
     2941 tttcgcggac gttacaccgt gactctatct accgccagca cactgcgcag catagctaag
     3001 cggatgtatt gccccagttc tcgctgttcg gcgcgcggca gataaggcag ttcaccaatg
     3061 agcggtgccg gaagtttttt acccagcaca tcaatgattt ccgcataatg cgccagtcct
     3121 gggttgattc ggttagccac ccagccaatg agcggcagcc cgtcgttggc aatcgcctga
     3181 gctgttagca gtgcatggtt aatgcaacct tcctgaatac cgacaaccat caacaccggc
     3241 aactgttcct gcaccaccca ttcagagagt ggacgcaaat cattcatcag actgcgccag
     3301 ccgccagtcc cttctaccac gacatgatcg actttatcgg tcaggtttgc caggccgttt
     3361 gaaatgaggg tgtaattgat tgggcaactg tgcgccacgc tactttcttc ttcgcttaac
     3421 gcgataggat taactgcttc ataaggcagt tcgatggttg aaacactctg caacaccagg
     3481 gcatctttat tacgcagccc ttcgggtgtc tctttgctcc ccttcgctac gggtttatat
     3541 cccgcaactg tttttccctg ggaggctaac gcttgtagca atgcgcggga aaccaccgtt
     3601 ttccctacag aagtgtctgt accggtaata aagaaacgct tcagcatcac taactccacc
     3661 gttatgcttc acaaatataa actaggaaaa taattaacct tgaaagtcta agttatgctt
     3721 tcctggccca aattgagata gcgcaaattt tggtagaaca gttaaaaaat gttaaccatg
     3781 caacagacga atcaacaaag aaccgttata catcgcgtct tttaccagcg cagcgcctgc
     3841 catcgtgccc tggttagaaa actgagtact ctcaacgcta atgtgctgac tatacgtagg
     3901 aagggcctgc tgacgtatgc tgtccgagat gacagggaag aggatatctg ccgctttact
     3961 taacggtgag ccaatcagta ttttttgtgg gttaaataaa ttcaccatga tggcaagaat
     4021 gcgcccgaca tgcgcgccca ccccggtaat gatgtctttt gccagtagat cgccgcgcaa
     4081 tgccgcctga cacaatgagt ccacggttaa cggttgccca tgtaacatcg agctcatgga
     4141 ttgattgaga cgcagctgtg ccagctcaag aatactgtcc acactggcga tggtttcgag
     4201 gcagccgagg ttcccgcaat aacagcgttt accatatggg tcgacctgtg tgtggcctat
     4261 ttccacgaga ctactgctgc ctgcgtgtag cagatgacca tcggtaatga cgcccgcccc
     4321 cacgttgtga tcgataacca cctgaatcac atcgcgcgcc ccgcgtgagg caccaaacaa
     4381 ggcctctgcc atcgtccatg cgctgatatc atgctgaata taaaccggta cgccggtatg
     4441 ctgctccagc gcctcgccga gcggcatctc ttttacatcc tcgtagaacg gcatgcgatg
     4501 tacaatacca ttttccgtat caataattcc cggcagggtt atggcaatcg aagttagacg
     4561 ctcaagtttt ttctggtggc ggataaaaaa ctgatcgata tgggaaatga tacgatccag
     4621 caatggcaag tcatctttta acgccagttc ctgcgactct tccaccacca gtttgctgct
     4681 cagatcgcgc agagcaagga aaatctcacc gcgactaatg cgcagagaaa gatagtgcca
     4741 ggcttcagtt tcaaccacca gtcccaccgc cggacggcca cggttccccg cttctttgat
     4801 ttccagctct tgcaccaagt gtgcttcgag catctcacgg acaattttag tgatactggc
     4861 aggagccagc tgcgccagac gggaaagatc gatacgcgag actggaccaa gctgatcaat
     4921 caggcgataa accgcgcccg cgttggtctg ctttatttga tcaatgtgcc caggctggtt
     4981 ttcagcaacc accgcatact ccctatattt tcgcgctccg aaataatctg taggctatgg
     5041 tgaagcactt caatacgtgt cgtcaaattt ttacttagac atgtgattaa cagcacattt
     5101 ttcgggcttt ttcgctgaaa tttccctcac ctgagagcat tcagcagatg aatacgaaag
     5161 ttacgcgaag ctggactttg ttcatgatgt ttcggccaga ccaaccacat ttcagaaacc
     5221 gcatcctctt cagcaatcgg cacccagcgc atttcgttga gctgagcacg tttaaatgaa
     5281 gcaggcaaaa ttgaaacacc cagaccggcg gaaaccagac cgatgatggt cattgcctcg
     5341 cccacctcct gagtgatgac gggcgtcaaa tggtaacgtc gcatcagccc gagaatatcg
     5401 tcatacagcc ctgtcccgac gtgcggatca aaaaagacga agggttcttt cgccagttca
     5461 gccaacgtta cattcgggtt atttgccagg ggatgatcgt gcgggatcat cgccataagc
     5521 ggttcatgga cgatgactgc gtgttcaagc gtctccggta acgctgtgtt acgcagcaat
     5581 cccatatcca gcgttccttc aatgagcgga gcgatttgct cacgagtgtt catttcgcgg
     5641 gtttgtaaat ggacaccggg ataatcacgg cgaaacagcg ataacgtatc ggacaccgcc
     5701 cgaataaaag gagcggacga agtaaaacca atgcgcaact cccccgcttc accctgatgc
     5761 agtctttcag cgcgagcggc agcgtcatct accatagaca ggatttgccg actatctgca
     5821 agaaactgtt ttcctgctgc cgtcagcaat acactgcgat tagttcgtgc cagcagtcgg
     5881 gcaccaattt gttgctccag tgcctgaatc tgctgactta gcggtggttg cgaaatattc
     5941 aggcgggcag cggcgcgccc gaaatgcagc tcttccgcaa cagcaacaaa gtaacgcaga
     6001 tgacgaagtt caatattcat atttaaaaca tcttatttga gattattaat atattagaca
     6061 gaacaattcg attttcctaa cctatgtata agcctgatcc acaggcatat ttagcaagga
     6121 tttcaagtga gccgtactac aactgttgat ggcgctccgg caagcgacac tgacaagcaa
     6181 agcatttctc agccaaatca atttattaaa cgcggtacgc cgcaatttat gcgcgtcacc
     6241 ctggcgctgt tctctgccgg actggcaacc tttgcactcc tctattgtgt gcagcctatc
     6301 cttccggtgc tttcgcagga gtttggctta acccccgcga acagtagtat ttcactgtcc
     6361 atttccacgg cgatgttggc tattggtttg ctgtttactg gccccctatc cgatgccatt
     6421 ggtcgcaaac cagtgatggt cacggcgcta ctgttggcct ccatttgtac gttatttcga
     6481 caatgatgac cagctggcac ggcattttga ttatgcgcgc cttgattggg ctttcgttaa
     6541 gtggcgtggc agctgttggc atgacttatc ttagcgagga aatccacccc agtttcgtgg
     6601 ccttttcgat ggggttgtat atcagcggca actcaattgg cggcatgagc ggacgcttaa
     6661 ttagtggtgt cttcacggac tttttcaact ggcgaattgc tctggcggca atcggttgtt
     6721 tcgcgctagc ctcggcgttg atgttctgga aaatccttcc ggaatcacgc cattttcgcc
     6781 cgacttcgct gcgacctaag acgttgttta tcaactttcg tctgcactgg cgtgaccggg
     6841 gattaccgtt attgttcgca gaaggctttt tgctgatggg gtcgttcgtc acgctgttta
     6901 attacatcgg ctatcggttg atgctttccc cctagcatgt cagtcaggcc gtggttggct
     6961 tattatcgct ggcttatttg accggtacac ggagctcacc caaagccgga accatgacca
     7021 cccgctacgg gcgcggtccg gtgatgttgt tttcgacggg ggttatgctg tttggtttac
     7081 tgatgacctt attcagctcg ctgtggctga tctttgccgg aatgttactc ttctcagcag
     7141 gattcttcgc agcccactca gttgccagca gctggatcgg cccccgcgca aaacgcgcta
     7201 aaggccaggc ctcctcgctg tatctgttca gttactatct ggggtcgagt attgccggga
     7261 cgctgggtga tgttttctgg cataactatg gctggaacgg cgtcggcgca tttattgctc
     7321 tgatgctggt cattgctctg ctggtcggga cgcgtttgca tcgtcgtctg cacgcctgaa
     7381 aaataagccc ggactgcggt aactacacgt ccggacttat tgcttgctca aaccaacgtt
     7441 aatagccatc ctaaaataga cgaagcgcca gccaattccc gcagtgcgtc tagcgtcatc
     7501 aggattataa gtacccaaat aaacggattc attttgctgt gtgtcattta ttactgatgc
     7561 gcagttattc taccgctttg taagtagtaa aatagttaac ccgatcaaga ctactattat
     7621 tggtagctaa atttccctta agtcacaata cgttattatc aatgctgtaa tttattcagc
     7681 gtttgtacat atcgttacac gctgaaacca accactcacg gaagtctgcc attcccaggg
     7741 atatagttat ttcaacggcc ccgcagtggg gttaaatgaa aaaacaaatt gagggtatga
     7801 caatgaaaaa agtattagct ctggttgttg ccgctgctat gggtctgtct tctgccgcct
     7861 ttgctgcaga gactgcgacg accaccaaag cagcgccggc gaaaacgaca catcataaaa
     7921 aacagcataa agcagcacct gcccagaaag cgcaggcagc taaaaagcat cataaaaata
     7981 cgaaagctga acagaaagcc cctgaacaaa aagcgcaggc agcgaagaaa cacgccggga
     8041 aacacagtca tcagcaaccg gcaaaacctg ctgcacaacc cgcagcgtaa gttttcaaca
     8101 gtaatgctgg cgcgccccct cgcgcctgaa aattacggtg ctaagcgggt aacgtttagc
     8161 accgccttta gcggagggta gtatggtggg ccgttatcgc tttgagttca ttcttatcat
     8221 ccttatttta tgcgcactga ttgccgcccg tttttatctt tcctgactgt agttatctga
     8281 ttttactccc actttcatcc cgtcccgtct atagtattta tgagggtttg cttttaataa
     8341 tcataattac ccaccagagt gtgatatgcg tacaaccatt gctgtagtgt tgggtgcaat
     8401 tagtttgacg tctgcttttg tgtttgcaga taaaccagac gttgccaaat cggcaaacga
     8461 tgaggtcagc accctgtttt ttggtcatga tgatcgtgtg ccagtgaatg acacggccca
     8521 atcaccgtgg gacgcggttg ggcaactgga aacggccagc ggcaatttat gtacggcgac
     8581 gctgattgca cccaatctgg cattaacggc aggacactgt ttattgacac ctccaaaggg
     8641 taaagccgat aaagcagtgg tgctgcgttt tgtgtcaaat aaaggtcttt ggcgctatga
     8701 gatccacgac atagaaggcc gcgttgatcc gacactggga aagcggttaa aagcagatgg
     8761 ggatggttgg attgtacctc ccgcagccgc gccgtgggac ttcggattga ttgtgctacg
     8821 taatccccct tctggcatta caccgttgcc gttatttgag ggagataaag ccgcgcttac
     8881 tgccgcatta aaatcggctg gccgtaaagt aactcaggcg ggataccctg aagatcatct
     8941 cgatacgttg tacagtcatc aaaactgtga agtgactggc tgggcgcaaa cgtcggtgat
     9001 gtcacatcag tgcgatacct tgccgggtga cagcggttcg cctctgatgt tgcataccaa
     9061 tgacggctgg caattaattg gggtgcaaag ttcggctcct gccgcgaaag atcgctggcg
     9121 cgccgataac cgggccattt ctgttaccgg ttttcgcgac aagctggatc aactgtcgca
     9181 aaaataatgt tcaaacgctg cccgactgtg cgggcagcgt gttcatcagg caagtttcac
     9241 catgatcatt ccagccaaca gcaagaccag gccaatccag cctttacgat ttaaccgttg
     9301 accaaacaag atccaacctg cggctaacgt ggcggcaata ccaaacccgc cccacaatgc
     9361 ataagcgaca gacaagtcga tccctttaac ggcctgagaa agcgcactaa aggcagccag
     9421 caccgccgcc agggagagca agccaaatat tttgcgacga aagccgtcag aaaatttcaa
     9481 aaagacgtta gcaacgattt ccagcacgat tgccaatgcc agccaggcgg cgtgaaccca
     9541 ttcaaactgc gccatggttt acctccagtt caggtttacg cgctttacgg gtacctgatt
     9601 ttatcaacac aatcccggcg accagggtgg ttaacccggc aattttcatc agcgataaac
     9661 tttcgtcgaa taacaaaacg ctaaacaagg taataaataa aataccgata ccttcccaca
     9721 gcgcataagc tacgcctaag gcgatctttt taacggcgaa agagagaaat atatacgaca
     9781 gagaaatcat caccagcatt aaaataaagc cgccatttcc ctcactgacg ctcgcccatt
     9841 tcattgacag cgtaccggta atttctgtag caatagccag gcctaataaa atccaataaa
     9901 tatacattgt ccttctcctg caagagaatt attttaattt tcgcttaatt cagcgaaatt
     9961 aaagtaaagt ggtcaagccc cgcgcatagg gcaagcttag gcagaagaaa ggactaaagc
    10021 gcgttgcgcc agtgctgctc acctacgagc aagatagtgg atgaggtaca aagatgggta
    10081 aatgttgaaa ataaggtcct gaacaaattg tccataatat tacaattatc cgcagtgttg
    10141 cttctcgtca tcgcggatga taattgtcct cggtagttga acacgcctga tttgtatcat
    10201 agcttaagaa ttaactcaaa atattttcac ttctttacct gagcggtttg attttcgtta
    10261 tgatgacgga gcgaaaaaga cattattatt agcaaaggaa gaaaaaacgg ggacaagcat
    10321 ggcaaagccg atcatcacgc tcaatggcct aaaaatcgtc attatgttgg gaatgctggt
    10381 cattattctc tgcggtatcc gttttgccgc cgagatcatc gtgccgttta ttctcgcatt
    10441 atttattgct gttattctta acccgctggt gcaacacatg gtccgctggc gagtgccgcg
    10501 tgtactggcg gtgtcgattt tgatgaccat catcgtgatg gcgatggtgt tgctattagc
    10561 ttatctgggt tccgcgctca acgagttgac gcggacgtta ccgcaatatc gcaactctat
    10621 tatgacgccg ctgcaagctc ttgagccgtt gttgcaacgc gtagggattg acgtctcagt
    10681 tgaccagctg gcgcattaca ttgatccgaa cgcagcgatg acgttgctca ccaacttatt
    10741 gacgcagtta tctaatgcca tgttatcaat atttttattg ctgctgacgg tgctgtttat
    10801 gctgctcgaa gtgccacaat tgcccggaaa atttcagcaa atgatggcgc gtccggttga
    10861 agggatggcg gcgattcaac gtgcaattga cagtgtttct cattatctgg tgctgaaaac
    10921 agccatcagc atcatcaccg gcctggtcgc ctgggcgatg ctcgccgcac tcgatgttcg
    10981 cttcgctttt gtctggggat tgctggcctt tgcgcttaat tacatcccta atattggttc
    11041 agttctcgcg gcaatccccc ctatcgctca ggtactggtg tttaatggct tctacgaagc
    11101 gttgctggtg ctggcgggat atctgctgat taatctggtc ttcggcaata ttctggagcc
    11161 gcgcatcatg ggacgtgggc tggggctttc cacattggtg gtatttttgt cgttgatttt
    11221 ttggggatgg ttgttaggac cggtgggtat gctgctttcc gtgccgttaa caattattgt
    11281 caaaattgcg cttgaacaaa cagcgggagg tcaaagcatc gccgttctgt taagcgatct
    11341 caataaagag tgacggcctc cgcagaggcc gtcagggtta cagagctttc aggattgcat
    11401 ccacgctggc tttggcgtca ccaaacagca tgtgggtgtt ttccttgaag aacagcgggt
    11461 tttgcacacc agcatagcca gtgttcatcg aacgtttaaa gacaatcacg tcctgcgctt
    11521 tccacacttc cagcacaggc ataccagcaa taggactctt cggatcatcc tgcgccgccg
    11581 ggttaaccgt atcgttagca ccaatcacca gtacggtatc ggtatcagca aagtcatcgt
    11641 tgatctcgtc catttccagc acgatgtcat acggtacttt tgcttcagcc agcaatacgt
    11701 tcatatgtcc aggcaaacgc cccgcaaccg ggtggatacc gaaacgcacg ttgataccac
    11761 gagcgcgcag tttctcggta atttcagcga caggatattg cgcctgcgcg actgccatgc
    11821 cgtaccccgg agtaatgatc actgaatggg agtttttcag cagttccgct gtctcttctg
    11881 cggtgatttc gcggtgctcg cccacttcct gatcatcgcc agtagaagag ccgtcggtgc
    11941 cgaaaccacc cgcaataacg ctgataaagg aacggttcat cgccttacac ataatgtaag
    12001 aaaggatagc ccccgaagaa ccgaccagcg caccggtcac aatcagcagg tcgttgctga
    12061 gcataaagcc cgcagccgca gccgcccagc cggagtacga gttcagcatc gacaccacca
    12121 ctggcatatc tgcaccaccg atggaggcga ctaaatgcca gccgaatacc agcgcaatgg
    12181 cggtcattat tagcaatgcc agcacttgca ggccgacgct gtccgtgcga acaaatacaa
    12241 tcagcagcag gaaggaaacg accagagccg ccaggttcat tttgtgacgg tttggcagca
    12301 tcaacggttt agacgaaatc ttgccacaca gtttgccgaa cgccaccacc gaacccgtga
    12361 acgttaccgc cccgatgaag ataccgagga acacttccgt caggtgaata ttgaccagaa
    12421 tcggtgccat tcccgcgtca tgatgcagat agctgttaaa gccaaccagc actgccgcca
    12481 gacccacgaa gctgtgcagg atcgccacca gttctggcat ttcggtcatt tcaactttct
    12541 tcgccagacg gataccaatt gccccaccaa tgaccatcgc cagcaagatc cagccaacat
    12601 tacccgtatc cggtccaaaa atggttgcga ttaacgcaat cgccatccct gcgataccga
    12661 agttgttacc ctggcgagac gtttcatgtt tcgaaagacc ggccagactg aagataaaca
    12721 ggatcgcggc aacaatgtat gcagctgtaa ctaatcctcc agacatatgt taccccttaa
    12781 tttttgcgga acattttcag catgcgctga gtcacggtga agccaccgaa aatattaatg
    12841 ctggctataa gcaccgcgat aaaactaagg aagctaaccc agccgccctg gccaatctgc
    12901 aacagtgctc cgacaacaat aatccctgaa atcgcgttgg tgaccgacat caacggtgta
    12961 tgcagcgcgt gcgatacatt ccacaccacg taataaccga caacgcaggc cagcgcgaaa
    13021 acggtgaagt gcccaagaaa ctctttcggc gcaacgcttg ccagccaacc gaaaaggatg
    13081 attgccagcg ccatcaacgc gtatttacgc cacggtgagc aggcacattt ttcctcagtt
    13141 ttcacttccg gtgccgcttt ttgtgccgcc tgcggctgag ctgatacctg aatcggcggt
    13201 gccggccagg taatttcgcc cgcacggatc acggtcacgc ggcgaatcac cacatcatca
    13261 aaatcaacag tgatattgcc gtctttctct ttgcacaaca gtttcagcag attaacgagg
    13321 ttagtaccgt aaagctgcga ggattgcgtc ggcagacggc ccggaagatc ggtataacca
    13381 atcactttga caccattttc cgtagtgaag atttcacccg gcacggtgta ttcacagttg
    13441 ccaccgtttt gggctgccag gtcgacaatc acactgcccg tcttcatgga gtcaaccatt
    13501 tcacgggtaa ttagcttcgg cgctggtttg cctggaataa gcgcggtggt gacaatgata
    13561 tcgacctctt ttgcctgggc ggcaaagagt tccatttctg ctttaatgaa cgcgtccgac
    13621 atcactttgg catagccatc gccgctgccc gcttcctctt taaaatccag ctcgaggaat
    13681 tccgcgccca tactttgaac ttgttctttc acttccggac gggtgtcgaa tgcacgcaca
    13741 atcgcgccga gactgtttgc tgcgccaatg gcggccagac ctgcaacacc cgcaccaatc
    13801 accatcactt ttgccggtgg cactttcccg gccgcagtaa tttgcccggt aaagaagcgc
    13861 ccaaattcat gtgccgcttc aacaatggcg cgataaccgg cgatgttcgc catcgagctt
    13921 agtgcgtcca gcgattgtgc gcgtgagata cgcggcacag aatccatcgc catcacggtc
    13981 acgttacgtt ccgcaagttt ttgcattaat tccggattct gcgcaggcca gataaaactc
    14041 accagcgttg tcccaggatt cagtaacgca atttcatcat ctaacggcgc attgaccttc
    14101 agaatgatct ctgactgcca gacgctattc ccttctacaa tttcagcgcc cgcttgcaca
    14161 aacgctttat cgtcaaaact tgccagttga cccgcgccgc tctctaccgc gacggtaaaa
    14221 cccagtttca gcagctgttc cactgttttt ggcgttgctg caacacgggt ttcattggtt
    14281 aaccgttctc ttggtatgcc aattcgcatg atattccctt ccatcggttt tattgatgat
    14341 ggtttgcctg tgtcaggagc cacacaagcc gctcatgtac gagctaaatg ttactccgtt
    14401 aaaataaatt agtaacaaac gccctataac gtactgaaaa ttatacctgt gatctagcgc
    14461 caaaaatcag tatttcggcg tgaactcgca aaatattaac gattcagccg tgatagtggg
    14521 ataaacacct tagaacgccg gataaagact gataattgtc ttcgacggtc gggtaaaacg
    14581 agacatcgcc ccggcacgat tcactactta acattaaatt aacttataca attcagttgc
    14641 ttcagtagta atgatgctga tacggctgtt ttttaagcat agacggtcat ttgagcagga
    14701 ttaaaattgg cttaaggaat gtgatatgaa aaatgacgca gacagttaca ccgtttaaat
    14761 gcaataatca gccacgtttc tcgttaataa caataccagt acctggtttg cgcaaggcga
    14821 aggattattt tatgaagctt aagaacaccc tcctggcgtc ggcactgctt tctgctacgg
    14881 cattctccgt taacgcagca acagaactga caccggagca agcggcagcg gttaaacctt
    14941 ttgaccgtgt agtggttacc ggtcgtttta atgctattgg cgaagcggtg aaagccgttt
    15001 ctcgtcgcgc agataaagaa ggtgccgcct ctttttatgt tgtcgacact tctgattttg
    15061 gtaacagcgg taactggcgt gtggtcgctg acctctataa agccgatgct gaaaaagcag
    15121 aagaaacaag taatcgcgta attaacggtg ttgtcgaact gccgaaagat caggctgttc
    15181 tgattgaacc gtttgacacg gtcaccgtcc agggcttcta tcgtagccag ccagaagtca
    15241 atgatgccat caccaaagcg gcaaaagcga aaggtgccta ctctttctac atcgttcgtc
    15301 aaatcgatgc caaccagggc ggcaaccagc gtattactgc attcatctat aaaaaagatg
    15361 ctaagaaacg tatcgtccag agcccggatg tgatcccggc agattccgaa gcaggacgtg
    15421 cagctctggc tgccggtggc gaagccgcga agaaagttga gatcccaggt gttgcgacta
    15481 ccgcatcacc aagttctgaa gtcggtcgtt tctttgaaac ccagtcatca aaaggcgggc
    15541 gttacaccgt cacgctcccg gatggcacta aagtcgaaga actgaacaaa gcgaccgcag
    15601 cgatgatggt cccgttcgat agcatcaaat tctctggcaa ctacggcaac atgaccgaag
    15661 tctcctatca ggttgcgaaa cgtgccgcga agaaaggtgc taagtattac cacatcaccc
    15721 gccagtggca ggaacgtggt aataacctga ccgtcagcgc agatctgtat aaataactat
    15781 tcagttactc ctataaggcg gcttgatgcc gcctttcgca tttttagtca caaatttccc
    15841 cgcgaccatt gcatgcagac acatctcttc gtaaaatccc gcgcttcagt ggcaaactcc
    15901 atttttatgc gttttgccct aatatttatt cttcttatca cgttttaatc actggatatc
    15961 gatggaaaag aaactgggac tgagcgcact caccgcgctg gtattaagct caatgctggg
    16021 cgcgggtgtt ttcagtctgc cgcaaaatat ggcggcagtt gccagcccgg cagcactgct
    16081 catcggctgg ggtattactg gcgctggcat tttattgctg gcctttgcca tgctgatcct
    16141 cacgcgcatt cgtcccgaac ttgacggcgg tatctttacc tatgcccgcg aagggtttgg
    16201 cgagctaatc ggcttttgtt ccgcatgggg atactggctg tgcgcagtca tcgccaacgt
    16261 ctcctatctg gtgatcgttt tttccgcgtt aagctttttt acggacacgc cggaattgcg
    16321 cctgttcggc gatggtaata cctggcaatc gatcgtcggt gcatcggctt tattgtggat
    16381 tgttcacttt ttgatcctgc gcggggtgca aaccgctgcc agcattaacc tggtggcgac
    16441 actggcaaaa ttgttgccgc tgggtctgtt tgttgtgctg gcgatgatga tgttcaaact
    16501 ggataccttc aagctcgact tcaccggact tgtacttggc gtacccgttt gggaacaggt
    16561 gaaaaacacc atgctgatca ccctgtgggt tttcattggt gtggaaggtg ccgtggttgt
    16621 ttctgcgcgt gcgcgtaata aacgtgatgt tggcaaagcg acactgctgg cggttctctc
    16681 cgctctgggc gtttacttgc tggtaacgct gctttcgctg ggtgtggtgg cacgtcctga
    16741 actggctgaa attcgtaacc cgtcaatggc cggtctgatg gtggaaatga tgggaccatg
    16801 gggcgaaatc atcatcgctg ccagtttgat cgtttccgtt tgcggcgcgt acttaagctg
    16861 gaccatcatg gcggcagaag ttccgttcct ggctgccact cataaagcat tcccacgcat
    16921 ttttgcgcgc cagaacgcac aagctgcgcc atccgcctca ctgtggttga ccaacatctg
    16981 cgtgcaaatt tgtctggtac tcatctggct gaccggttcc gattacaaca cgttgctgac
    17041 catcgcctca gaaatgattc tggtgcccta tttcctggtc ggcgcgttct tgctgaaaat
    17101 cgcaacccgt ccactgcata aagcggtagg tgtcggtgcc tgcatttatg gcttatggtt
    17161 attgtacgcc tctggtccaa tgcacttgct gttatccgtt gttctgtatg cgccggggct
    17221 gctggttttc ctgtatgcgc gcaaaacgca tacacatgat aatgtactga accgtcagga
    17281 aatggtgctg attggcatgc tgttaattgc ctcagttccg gcgacctgga tgctggtggg
    17341 ataacgttca tcccatcgtt ggatagcaaa ggagataacg atgggtaaag cccagccctt
    17401 gccaatatta attactggcg gaggtcgtcg catcggcctc gccctcgcct ggcatttcat
    17461 taatcaaaag caaccggtga ttgtcagcta tcggacgcac tatccagcca ttgatggact
    17521 gattaaggca ggtgcgcagt gtattcaggc tgatttttcg accaacgacg gtgtgatggc
    17581 gtttgccgat gaagtactaa aaagcaccca tggtctgcgt gctattttgc ataacgccag
    17641 tgcgtggatg gcggaaaaac tgggtgcgcc actggccgac gtactggctt gcatgatgca
    17701 gatccacgtt aataccccat acctgctcaa ccatgcgctg gaaagattac tgcgtgggca
    17761 cggacacgcc gccagcgata tcattcactt taccgattat gtggtggagc gcggtagcga
    17821 caagcatatt gcgtatgctg caagcaaagc ggcactggat aatatgaccc gctcgtttgc
    17881 ccgcaagctg gcaccggaag tgaaagtgaa ttctattgct ccatcgctga tcctgtttaa
    17941 tgaacatgat gatgccgaat atcgacaaca ggcgctgaat aaatcactga tgaaaaccgc
    18001 gcctggcgag aaagaagtga tcgacctggt cgattactta cttaccagtt gctttgtcac
    18061 cggacgcagt ttcccacttg atggcggtcg tcatctgcgt taatgcagct ttatccagca
    18121 tataatcaac acccatgcgc ttatccccca acacgcaaca gaaccaacaa aagcggcggg
    18181 caagcgcatc attccggtga aataccacag cgacaccagg taaacaaaat agggaataat
    18241 cgaccacata ctaaaaatga tggttgcgcg taaggcttca atgccgcgtt cgctggcaac
    18301 aatataatgc gcgataagcg caaaggtcgg gaaaagtgga atcagcccgg cgatataata
    18361 atttttcgtt tttgctaaaa caccaatcaa cagcactacc agcacaccga gcgcggcttt
    18421 gattttacct taacacttcc ataacaagtc atcagtagaa tacctgatga aaacttgttt
    18481 agaaacgatt gatagtaagt aaaaacagcg cggtgtattg tgacgttttt atatctaccg
    18541 tgaatgttat gaacactatc gtatttgtgg aagatgatgc ggaagtcggt tcactgattg
    18601 ccgcgtacct ggcaaaacat gatatgcagg ttaccgtaga gccgcgcggc gaccaggccg
    18661 aagaaaccat tttgcgagaa aatccggatt tggtgttact cgacatcatg ctaccaggca
    18721 aggacggcat taccatttgt cgtgatttac gcgcaaagtg gtctggaccg attgttcttc
    18781 taacctctct cgatagcgat atgaaccaca tcctggcact ggaaatgggt gcctgcgact
    18841 atattctcaa aacgatgccc cctgctgttt tgctagcgcg tttacgtttg catttgcgtc
    18901 agaatgagca agccacactg accaaaggtc ttcaggaaac gtctctgact ccctacaaag
    18961 ccctgcattt cggcacgttg accatcgatc ccatcaaccg cgtagtcacc ctggctaaca
    19021 ctgaaatctc gctctcgaca gctgatttcg aattattgtg ggaattagct acccatgccg
    19081 ggcaaatcat ggaccgcgat gcattgctga aaaatttacg cggcgtcagt tatgacggac
    19141 tggatcgtaa cgtggacgtg gctatttcgc ggttaagaaa aaaactgctc gataacgccg
    19201 cagaacctta tctgcattaa aactgtgcgt aacaaaggct atctttttgc gcctcatgca
    19261 tgggaataag cgatgaaaaa actgtttatc cagttttacc tgttattgtt tgtctgcttc
    19321 cttgtgatgt ctctgctggt tgggttggtg tacaaattta ccgccgaacg cgcgggcaaa
    19381 cagtcgctgg atgatttgat gaacagttcg ctgtatctga tgcgcagcga attgcgtgag
    19441 atccccccac acgactgggg taagacgctg aaagagatgg atttaaatct ctctttcgat
    19501 ctgcgtgtcg agccactgag taaataccat cttgatgata tttccatgca ccgactgcgt
    19561 ggcggcgaaa ttgtcgccct ggacgatcag tacacgtttt tgcagcgtat cccgcgcagc
    19621 cactacgtgc tggcagttgg tcctgttcct tatctttatt atctccatca gatgcgattg
    19681 ctggatatcg ccctgatcgc ttttattgct atttccctcg cctttccggt gtttatctgg
    19741 atgcgtccgc actggcagga tatgttaaaa ctggaagcag cggcgcaacg atttggcgat
    19801 gggcatctct atgagcgtat ccactttgat gagggttcga gctttgaacg acttggtatc
    19861 gcatttaacc agatggcgga caatatcaac gccttgattg ccagcaaaaa acagcttatt
    19921 gacggtatcg ctcacgaact gcgaacaccg ttagtgcgcc tgcgttatcg actggagatg
    19981 agcgataacc tgagcgccgc cgagtcccag gcgttgaatc gtgatatcag tcaacttgaa
    20041 gctttaattg aagagctgct gacttatgcc cgactcgatc gcccacaaaa cgagcttcat
    20101 cttagcgaac cagacctgcc gttgtggctg tcaacgcatc tggcagatat tcaggcagta
    20161 acgcccgata aaacggtacg gataaaaacg ctcgtgcaag gccattatgc ggcgttggat
    20221 atgcgcttaa tggagcgcgt gctggataat ttgctcaata acgccctgcg gtactgccat
    20281 tcaacggttg aaaccagcct gctactgtcg gggaatagag cgacattaat tgttgaggat
    20341 gatggcccag ggattgcccc agaaaaccgc gaacatatct ttgaaccttt tgttcgcctc
    20401 gatcccagcc gggatcgctc aaccggcggc tgcgggctgg ggctggcaat tgtccactct
    20461 atagcactgg caatgggcgg tacggttaat tgtgacacca gcgaactggg tggtgctcgc
    20521 ttctcgttta gctggccgtt atggcataac atcccgcaat ttacctctgc ctgacactac
    20581 gcgcacgatg gtcaagtcac caccattgtg ctataaatta aggatgttgt aactaaagtg
    20641 gttaatatta tggcgcgtta cgatctcgta gaccgactca acactacctt tcgccagatg
    20701 gaacaagagc tggctgcatt tgccgctcat cttgagcaac acaagctatt ggttgcccgc
    20761 gtgttctctt tgccggaggt aaaaaaagag gatgagcata atccgcttaa tcgtattgag
    20821 gtgaaacaac atctcggcaa cgacgcgcag tcgctggcgt tgcgtcattt ccgccattta
    20881 tttattcaac aacagtccga aaatcgcagc agcaaagccg ctgtccgtct gcctggcgtg
    20941 ttgtgttacc aggtcgataa cctttcgcaa gcagcgttgg tcagtcatat tcagcacatc
    21001 aataaactca agaccacgtt cgagcatatc gtcacggttg agtcagaact ccccaccgcg
    21061 gcacgttttg aatgggtgca tcgtcatttg ccggggctga tcacccttaa tgcttaccgc
    21121 tcgctcaccg ttctgcacga ccccgccact ttacgttttg gctgggctaa taaacatatc
    21181 attaaaaatt tgcatcgtga tgaagtcctg gcacagctgg aaaaaagcct gaaatcacca
    21241 cgcagtgtcg caccgtggac gcgcgaggag tggcaaagaa aactggagcg agagtatcag
    21301 gatatcgctg ccctgccaca gaacgcgaag ttaaaaatca aacgtccggt gaaggtgcag
    21361 ccgattgccc gcgtctggta caaaggagat caaaaacaag tgcaacacgc ctgccctaca
    21421 ccgctgattg cactgattaa tcgggataat ggtgcgggcg tgccggacgt tggtgagttg
    21481 ttaaattacg atgccgacaa tgtgcagcac cgttataaac ctcaggcgca gccgcttcgt
    21541 ttgatcattc cacggctgca cctgtatgtt gcagattaac gcccggcttt catactgccg
    21601 accatctgtt ctggccgtac ccagctgtca aactcggctt cgctaagata ccccagcgca
    21661 agggccgcag cttttaaggt cagcccttct ttatgcgctt ttttggcgat ctccgcggct
    21721 ttgtcataac caatgtgggt gttaagcgca gtcaccagca tcagcgattc attgagtaat
    21781 tgattgattc gctcacgatt cggttcaata cccactgcgc agtgtttgtt aaaactttcc
    21841 atgccatctg ccagcaagcg caccgattgc aggaaattat ggatcaccat cggacggaag
    21901 acgttcagtt caaagttacc ggaagcgcca cccatgttga tcgccacgtc gttccccatt
    21961 acctgacagc agagcatggt taatgcttca cactgggttg ggttcacttt ccccggcatg
    22021 attgagctgc ccggctcatt ttccgggatt gagatttcac caattccgca gcgcgggcca
    22081 gaggccagcc agcggacatc attggcgatt ttcatcagtg acgcagccaa ccctttcaac
    22141 gcgccgtgcg cctgaaccag ggcatcacag gtcgcaagcg cttcaaattt gttcggcgcg
    22201 gtaacaaacg gtgcacaggt aatgactgcc agttcatctg ctacgcgacg cgcatactcc
    22261 ggatgggtat ttagtccagt acccaccgct gtaccgccaa gagccagttc cgctacgtga
    22321 ggcaggctgt attcgatatg tttgagatta tgctcgagca tcgctaccca gccggaaatc
    22381 tcctgcccta gtgttagcgg cgtggcgtcc tgcaagtggg ttcgaccgat tttgacgata
    22441 tcggcaaatg cacgcgattt ttcactcagt gtctgcgtca gggttttaag ctgcggaatg
    22501 agttgcttgc gcagcgccag cagcgccgca acgtgcatcg ccgtcggaaa gacatcgttg
    22561 gaactttggc ttttgttcac gtcgtcgtta gggtgaactt tacgttccat cccgcgcacg
    22621 ccgccgagta attcactggc ccggttagcc agcacttcgt tcatgttcat gttactttgc
    22681 gtgccggagc cggtctgcca gatagccagc gggaattcgt cgtcatgctg tcctgccagt
    22741 acttcatccg ccgcctgccg aatggcgctc gctttctctt cagacaacaa gcctaaatct
    22801 tcattaactt ttgccgctgc gcgcttggtt agcgccagcg catgaatcag tgaggtgggc
    22861 attttctccg tcgaaatgcg gaaatgctcc agcgagcgtt gagtttgtgc gccccacagc
    22921 ttatctgccg ggacatcaat cgcccccatc gaatcttttt cgctgcgtac tgtattcatg
    22981 gcctgctcct cacctgttta attttttctt tctgttttgc tttcgctaag caacttttag
    23041 ctcacttatt atttactatt tgataacaag tgtttggtct ttcgtgccat gtaaaaaaac
    23101 cgccccgaag ggcggctctg tttatttcac acagcgagtg cactgtgtga gttgtatctg
    23161 ctggaagaag tcatttcctt tatcatccac aaggataaac gccgggaaat cttccacttc
    23221 aattttccag atggcttcca ttcccagttc cggatattca acacattcca ggctcttaat
    23281 acttccctgc gccaatacag cggccggacc accgatactg ccaaggtaga agccgccgtg
    23341 ttttttacag gcatccgtca cctgctggct gcggttgcct ttcgccagca tgatcatact
    23401 tccgccctgc gcttgcagtt gatcgacata agaatccatc cgtccggcgg tcgttgggcc
    23461 aagagaaccg gaggcataac cttccggcgt tttggccgga cccgcgtagt aaatcggatg
    23521 atctttaatg tactgcggca gcccttcacc gttatccatc cgctctttca gtttggcgtg
    23581 agcaatatca cgaccgacga taatcgtgcc gttaagcgat aagcgtgtag aaacgggata
    23641 ctgcgacaac tgtgcgagga tctctttcat cggacggtta aggtcaacgc gcaccgcttc
    23701 gccttctccc gctttacgca gctcttcagg gatatattta cctggattat gttccagttt
    23761 ttcgatccag atcccctgac ggttgatctt cgctttgata ttacggtcag cagagcagga
    23821 aacacccata ccaaccggac aggatgcgcc gtgacgtggc aggcgaatca cgcgtatgtc
    23881 gtgagcgaag tatttaccac caaactgcgc acccagaccg agattttgcg cttcgatcag
    23941 caattctttt tccagttcca catcgcggaa tgcctgaccg tgctcattcc cttccgttgg
    24001 cagttcgtca tagtatttag cggaagccag tttcactgtt ttaaggttag tttctgcaga
    24061 agttccacca attacgaacg caatatgata cggaggacag gccgccgtac ccagcgtgcg
    24121 catcttctca accaggtaat ttttcagttt ccccggcgtt agtaacgctt tggtttcctg
    24181 atagagatac gtcttgtttg ccgaaccacc acctttggcg atacagagga atttgtactc
    24241 gtcgccatca acggcataaa gatcgatctg cgctggcaga ttggtgccgg tattcacctc
    24301 tttatacata tccagcggcg cgttttgcga gtagcgcaaa ttatcttcga tataagtgtt
    24361 atagacaccg cgcgccagcg ccgcttcatc acagccaccg gtccatacac gctgcccttt
    24421 tttaccaaca ataatcgcag tgccggtatc ctgacaggtt ggcagaacac ctttcgccgc
    24481 gatgtcggag ttgcgcagga attgcagcgc cacatattta tcattttcgc tggcttccgg
    24541 gtcacgcaga atgtcggcca cctgttgttg gtgagccgga cgcagcataa atgacgcatc
    24601 atgaaacgcc tgacgcgcca acagagttaa cgcttcgggt gcgactttca aaatctcctg
    24661 cccttcaaat tcagatacgc taacgtgttc gctggttagc aggtaatact cagtatcatc
    24721 ttttttgagt ggaaaaggag cctgataatg aaagggtttg tttgacattg ttctctcact
    24781 tactgcctgg tttggttatg ctctgggcgg gtgttccgtt gccctgttaa aagcgagtaa
    24841 caatatccta cacacttttt taacaaaaac tgagactagt acgacttttt gcggctccag
    24901 gttacttccc gtaggattct tgctttaata gtgggattaa tttccacatt aaaacaggga
    24961 ttgatcatgc aaaaactcat taactcagtg caaaactatg cctggggcag caaaacggcg
    25021 ttgactgaac tttatggtat ggaaaatccg tccagccagc cgatggccga gctgtggatg
    25081 ggcgcacatc cgaaaagcag ttcacgagtg cagaatgccg ccggagatat cgtttcactg
    25141 cgtgatgtga ttgagagtga taaatcgact ctgctcggag aggccgttgc caaacgcttt
    25201 ggcgaactgc ctttcctgtt caaagtatta tgcgcagcac agccgctctc cattcaggtt
    25261 catccaaaca aacgcaattc tgaaatcggt tttgccaaag aaaatgccgc aggtatcccg
    25321 atggatgccg ccgagcgtaa ctataaagat cctaaccaca agccggagct ggtttttgcg
    25381 ctgacgcctt tccttgcgat gaacgcgttt cgtgagtttt ccgagattgt ctccctactc
    25441 cagccagtcg caggtgcaca tccggcaatt gctcactttt tacaacagcc taatgccgaa
    25501 cgtttaagcg aactgttcgc cagcctgttg aatatgcagg gtgaagaaaa atcccgcgcg
    25561 ctggcgattt taaaatcggc gctcgacagt cagcagggtg aaccgtggca aacgattcgt
    25621 ttaatttctg aattttaccc ggaagacagc ggcctgttct ccccgctgtt actgaatgtg
    25681 gtgaaattga atcctggcga agcgatgttc ctgttcgctg aaacaccgca cgcttacctg
    25741 caaggcgtgg cgctggaagt gatggcgaac tccgataacg tgctgcgtgc gggtctgacg
    25801 cctaagtaca ttgatattcc ggaactggtt gccaatgtga aattcgaagc caaaccggct
    25861 aaccagttgt tgacccagcc ggtgaaacaa ggtgcagaac tggacttccc gattccagtg
    25921 gatgattttg ccttctcgct gcatgacctt agtgataaag aaaccaccat tagccagcag
    25981 agtgccgcca ttttgttctg cgtcgaaggc gatgcaacgt tgtggaaagg ttctcagcag
    26041 ttacagctta aaccgggtga atcagcgttt attgccgcca acgaatcacc ggtgactgtc
    26101 aaaggccacg gccgtttagc gcgtgtttac aacaagctgt aagagcttac tgaaaaaatt
    26161 aacatctctt gctaagctta ttaaaggctt ataacacctt caggcggcca gtccgcctga
    26221 tttcatttta tggataatca ttatgaataa atcgctggta gcggtaggcg tcattgttgc
    26281 gctaggcgta gtctggacag gcggcgcatg gtatacaggc aagaagattg aaacccatct
    26341 cgaagacatg gtcgcgcagg cgaacgcgca actaaaactg acagctcctg aatccaacct
    26401 ggaagtgagt tatcaaaact atcatcgcgg cgtattcagc agtcagttgc aactgttggt
    26461 gaaacccatt gccgggaaag aaaatccgtg gattaaaagc ggtcagagcg tcatcttcaa
    26521 cgaatcggtt gatcatggtc ccttcccgct tgcccagctt aaaaaactga acctgatccc
    26581 gtcgatggca tcaattcaaa ccacgctggt taataacgaa gtaagcaaac cactgtttga
    26641 tatggcaaaa ggtgaaacgc cttttgagat taactcgcgc attggttaca gcggtgattc
    26701 cagttccgat atttcgctca agccactgaa ttacgagcaa aaggatgaaa aagtcgcctt
    26761 tagcggcggc gagttccagt taaatgctga cagagacggc aaagccatct ccctttccgg
    26821 ggaggcgcaa agtggtcgga tagacgcagt taacgaatac aaccagaaag tgcagttgac
    26881 ctttaataat ctgaaaaccg acggttccag cacgctggca agttttggtg agcgcgtagg
    26941 aaaccaaaaa ctgtcactgg aaaaaatgac catttcagtg gaaggcaaag aactggcact
    27001 gctggaaggc atggagatca gcggtaaatc ggatctggtc aatgacggta aaacgatcaa
    27061 tagccaactg gattactcgc taaacagcct gaaggtacag aatcaggatc tgggcagcgg
    27121 caagctgact ttaaaagtcg gccagattga tggtgaagcc tggcatcagt tcagccagca
    27181 atataacgcg caaactcagg cgctgctggc acagccagaa attgccaaca atcccgaact
    27241 ttatcaggag aaagtgacgg aagccttctt tagcgccctg ccgctgatgt tgaaaggcga
    27301 tccggtgatt actgtcgcgc cgctaagctg gaaaaacagt cagggtgaaa gtgcgctgaa
    27361 tctgtcgctg ttcctgaaag atccggcaac gactaaagaa gcgccgcaaa cgctggcgca
    27421 ggaagtagat cgttcggtta aatctctgga tgcgaaactg accattccgg tggatatggc
    27481 aactgagttt atgactcagg tagcgaagct ggaaggttat caggaagatc aagcgaaaaa
    27541 actggcgaaa cagcaagttg aaggtgcatc agcaatgggg cagatgttcc gtctgaccac
    27601 cttgcaggac aataccatca ccaccagcct gcaatatact aacggtcaga taacgttaaa
    27661 tgggcagaaa atgtcgttag aagattttgt tggcatgttt gcgatgccag ctcttaacgt
    27721 tccggctgta ccggcaattc cgcagcagta attcacggcc aaaacgccgg agaattttca
    27781 cttcggcgtt ttcatctgaa aacaaaccag agattgcctg atgcgctacg cttatcaggc
    27841 ctaccttttc ctgcaatact ttgaatttat gagtttttgt aggctggata aggcgtttac
    27901 gccgcatccg gcataaaaaa cgcgcacttt gtcaacaatc tgaaacgccg gaggtttttc
    27961 tctccggcgt tatttcttac ttcagcataa agtcatactg aatactcatt ttcacatccc
    28021 agtaattcag gcgatcgccc agcgtactgc catcgcgctt ttcccgccct ttatcggcag
    28081 caagaaagaa attcatccct tgtaacggcc cttcgctgac ccgatagttc ataccaccta
    28141 agatacccgt gccttcaatc cgcacatctc gtttactgga ttcatagccg cgagtcacaa
    28201 tcggtgcaaa tgtcagtgta aattgcggcg ttaaacgata gttgacgccc aattgccagg
    28261 actgcattcc ttcacggtta cgatcaagac ttaatgaaaa gggatagcca atgtcggtat
    28321 ccaccacggc accattcatt gcatggcgca aataaccacc actgccaaat acgcttcccc
    28381 acggcgcatt ccaggtcaat tgtccactaa ccaacgccgt ttcattgggc tggctggtat
    28441 tacgacttaa accttcgagc tgcgcgtaaa agccgagcaa ctcccctttc aacgtataat
    28501 tcgggtcgag cggtatgctt ttctcgagaa tactttgtat ctgattggaa acatctttct
    28561 gtaccgatgc ccccagagaa tagcgactgg tatcatcatg ccaactggcg gctaaaaaag
    28621 aacgtgcgcg atgtttatcg tattttcccg tctggctgtt atacacccct tcatcacgaa
    28681 taccggttgt tgaatcagtc cataaaaata ctcgtgaacg ccacattccc cacagatcaa
    28741 tatttggtgt taaagcccaa taacctaatg ctccttcaga aactgtcggt aatgtacgtt
    28801 gcgaactgcc agccattaac ggaatacgat aaggtaagct accataacta taatccgtcc
    28861 cgaagcgacc taatttaagc aggctatttt cacagggttt tatttttact gcccccaggg
    28921 caaagccaaa acttttatca ccatcaagat accaccgggt actcatatca gcacgagcac
    28981 ctaatttata aacataatat gccccgcctt caacgccaat aatattggaa taataaccac
    29041 tattgaaatc gaacaatcct ctctgtaccc atgcgtaaat atctcttccc gcgccagcac
    29101 tgggcttatc cgccctgcgc aattcgtttt tcagtctgat gcgtagtccc gcttcatcgt
    29161 cagccagttg cgccgcataa gcagaggtaa ggccagaggc agccgtcagg caaataacgg
    29221 ccatggccac tatttttctc atagttgcac ctttgatgtt ctgattattt ttattgaata
    29281 ttaattagtg atatcgctga ttaattgctg ctgcactttt ttacgattat caatttcaac
    29341 cacgatttct ttgaattttt tatccgtgag cggataaaac cagataataa cgaatgccag
    29401 tagcataaat ccgcaaggta ctaaggcaat tgatgtgcgg atgcccataa taacttccgg
    29461 cgtttgcacc tgattggcga tatatccgct taatcccaaa ataaaggcag gaattgaacc
    29521 tccgattgcc tgaccgcatt tacgggtaaa tgagaatagt gaataggtga gcccttcaat
    29581 tcgcacgccg gtcaggtatt caccgtattc tacggtatca gcttccagtg cccacatcac
    29641 agtcatagta acgccctgac caattgaagc gatggccaac gcaaccaacg ccaccggcag
    29701 tgaccagacg gaaacccaga agaatagcag ataaccgcag gttcccagca aagcgccaat
    29761 caggaaggta ttctttttac cgctcctcgc gaccatcccc ggcaccagcg gtgccgatgc
    29821 cacagtacca accaagtttt gcaccagtac cagcacagtg aacagcccgg tatcatttaa
    29881 cacatagcgc tcgtagaaca acgacgaggc gctgaccgca aaggtcgaaa tcagcacaca
    29941 cagcgcaccg atgcacaaca taaacagcgg gcgattccgt ttcagggttt gcagactgat
    30001 cttcaatgac ggctgcgcaa cgatacgtac cacattctca cgcgtcgatt tgaagcagat
    30061 gaagtaaagc accattccgg caatcgccag cacaatcgtc cagaaatggt ataccgacac
    30121 catctcttcc gggctggagt tcttaatgct cggccctatc agaaatgcca ggcagacaaa
    30181 ggtcaatgaa gcggcaatcc cacgagccgc gcccagacgg gcgcgggatt gtggttgttg
    30241 ggtcatcgcg gtagcaagtg aaccataagg aatattcacc aggctatagc aaagcccgag
    30301 gcccatgtag gtcaaatatg catacactac tttgctgcta tggctccagt cggtcggtac
    30361 ccagaatacc agcacgctga agatcattaa cggcgcagta ccgaagagta aaaacgggcg
    30421 gaattttccc cagcgggtat tcacactgtc caccactcgt ccggcaaaga cgtcggcgaa
    30481 ggcatcgaat acccgcacca ataacagcat ggtgcccgcc gcagcggcac cgacgcaagc
    30541 gacgtcggtg tagtaactca acaggaagag cgcccccatt gcgaaggcga agttattggc
    30601 gacgtcaccg aggctgtagc cgacgatggt gcgccaggag agttgttgat tcattgtttg
    30661 cctccctgct gcggtttttc accgaagttc atgccagtcc agcgtttttg cagcagaaaa
    30721 gccgccgact tcggtttgcg gtcgcgggtg aagatcccct tcttgttacc gccaacgcgc
    30781 aatatgcctt gcgaggtcgc aaaatcggcg aaattccata cctgttcacc gacgccggcg
    30841 ctgacgcgat caaagacgcg gtgatacata tccagccatg cacactgata ctcttcactc
    30901 cacatgtcgg tgtacattga gtgcagcccg gctaacgtat ccacgccgta ttcggtgatg
    30961 ataatcggct gatgcagttt ctcctgccag gctagaagtt ctttttccag taccttctct
    31021 gccgtttcca aatcgccgct ttggacatac catccgtaat aacggttcag gcacagcaca
    31081 tcaaagagat cgctgatggt atcggtgtga gcgtcgcaga acattacatt gacgcaggtg
    31141 atcggacgcg tcgggtcgag tttacgcgtt gcttccgcca gtggcgcgaa atattctcgt
    31201 gcaccttgcg gacgggtatc cggttcgttg gcaatactcc acatcaccac gcttgggtgg
    31261 tttttgtcac gcgctatcag ctctttaatc gcctgtaaat gcgcctgctg agtttccccg
    31321 ttgacagcct cttcgctgta cagttctttc ggcttgttgc ccgcttcgaa accaatgcct
    31381 aaagagaggt taaagccgac agctgcagtt tcatcaatca ccacgatgcc atgttcatct
    31441 gcccactcga gcatctcttc agcgtaaggg taatgcgagg ttcggtagga gttggcccca
    31501 atccagtcca ttaatgcgtg atcgtgcacc atcagcacgt tatcgaatcc tttgcctcgc
    31561 aaatccgcat cttcatgacg accaaagcca gtaaagtaga acggtttgtg gttgttcgtc
    31621 cttcactgcc actgaccgga tgccgacgcg cagcgggtag atatcacact ctgtctggct
    31681 tttggctgtg acgcacagtt catagagata accttcaccc ggttgccaga ggtggggatt
    31741 caccacttgc aaagtcccgc tggtaccttg tccagttgca accacctgct gatccgcatc
    31801 acgcagttca acgctgacat caccatttgc taccacctgc cagtcaacag acgcgtggtt
    31861 acagtcttgc gcaacatgcg tcaccacggt gatatcgtcc acccaggtgt tcggcgtggt
    31921 gtagaccatt acgctgcgat ggatcccggc atagttaaag aaatcatgga agtaagactg
    31981 ctttttcttg ccgttttcat cggtaatcac cattcccggc gggatagtct gccagttcag
    32041 ttcgttgttc acacaaacgg tgatacgtac acttttcccg gcaataacat acggcgtgac
    32101 atcggcttca aatggcgtat agccgccctg atgctccatc acttcctgat tattgaccca
    32161 cactttgccg taatgagtga ccgcatcgaa acgcagcacg atacgctggc ccgcccaacc
    32221 tttcggtata aagacttcgc gctgatacca gacgttgccc acataattac gaatatctgc
    32281 atcggcgaac tgatcgttaa aactgcctgg cacagcaatt gcccggcttt cttgtaacgc
    32341 gctttcccac caacgctgat caattccaca gttttcgcga tccagactga atgcccacag
    32401 gccgtcgagt tttttgattt cacgggttgg ggtttctaca ggacgtaaca taagggactc
    32461 ctcattcaaa taaaaatact ggtcaacctt taatctgatt agttaaccaa ttctgtgttg
    32521 cacacagtta tctgtgagaa acccatggaa gagaaatgga aataaaaaga actgacaccg
    32581 cgatcaaaaa accaaaatct gcaatacgca cagcgtgata tagatcgcat taatctttaa
    32641 aacagcgttg acagaagcca taaaataagc aatcgaacgc tcgttcgagc atcttgagaa
    32701 cgataaactc tcatgacata tggctacggt gaatattttg ggggggaatt ctccgatccc
    32761 ggctagattg tattttgtac agggaaatta aagtatgaaa cgcgggcaca gttatcacca
    32821 gcccgcgaaa tgagaggatc aggatgcggt taagataccg ccaatcatcg cgcgtaatcc
    32881 ctgagcaaac gacgcttcac gcgccagatc ttccgcttcg atatcggcca gtacaccgta
    32941 ggtcagatcc agcagtaaac gtgaagtcat tgacgtgttg atgtctgggc ttatctcgcc
    33001 tttttgctgg gcatcacgca tccgctgggc aacaaattca gtgatcgtca tatgcttatt
    33061 tttaagcatg gcggcgacct gtgggttacg catcccttcc gccataattt cgaccaccag
    33121 cgcccgttgc ccaaaggctt catgggtgag agagacaata gactcgacca tatagtcaac
    33181 aaaatgaatc ccttcaatcg gttcccggaa acgggccagc gccctctcct ggtcctgtaa
    33241 gataatcgcc tgaatcaagg cttctttgga gatgaaatgg tgataaagcg tcccgggact
    33301 aatggcgcag gatttacaga tggctttcat cgaggcactg tgaaatccat tttctgaaaa
    33361 aatctctctg gcagcattga ggatccgggt ccgtgtcggt tgtgcttcag tctgcatgtt
    33421 atccatcatt aaaccattat agttagcgtg aataactagt ttaccgcgtt gtcaggtgag
    33481 cgcctatcat tgctgttgaa tagtgcgaag gcacactcta ttcgtatgct tttcatccag
    33541 ctattggtta accaatagcc gtgatttggc tgccagttgt ttagcagaga cgttgatgaa
    33601 ttgcacacgc tatcccggta aacaacacat acggctgttt accggttcgt tagtgtatta
    33661 attgagctcc tgtaccccac caccggagac ggtgagaatt tgtccgctta cccagctggc
    33721 tgcaggcgag caaaggaaca gcgccgcgtt agcaatatct tgcggttgac ccagacgtct
    33781 gatcggcgtg tgctgtaaca ttttttgttc aatttctggt gtaataacgg atttcagggc
    33841 atcggttaat attgcccccg gcgcaatgcc attcacccga atattttttt cacccaggtc
    33901 aaatgccata tttctgacca gatgactggc cgcagcttta gatgatgcat aggaagtcat
    33961 gtttatattt ttattttctg ccgccataga agtgatggtc agaataacgc caccgccatt
    34021 tttttccatt tctggcgcaa caagttgtga cagatggaaa aaagaaaaca cattcagttc
    34081 ataagcacgg cgaaaatccg ccattggcat atcaaacggt ttaggtccac cgccaccggc
    34141 gttgttaacc agaatatcaa ctttacccag cttactgata gcaaagtctg ccagtgcaga
    34201 gagttcctgt tcggaagtaa tatcacaacg gcaggcaaat gcctgccccc ccagttgttg
    34261 aatttcgtct acaacatggt tagctgcgtc ggcgttaata tcactgacca ccacagatgc
    34321 gccagctgtc gcgaatgtaa tggcgatttc tttaccaata cctgcacccg cacctgtgat
    34381 gatggcgcat tttccgtcga gtctcaggtt gtcagaatta aacacataaa cctcctgtga
    34441 acttcagtaa aaataaaagg caccgcct
//
LOCUS       DADMJE010000025        34135 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.025, whole genome shotgun sequence.
ACCESSION   DADMJE010000025 DADMJE010000000
VERSION     DADMJE010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 34135)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34135)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34135
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.025"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..318)
                     /locus_tag="JN001_001083"
     CDS             complement(<1..318)
                     /locus_tag="JN001_001083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9052386.1"
                     /translation="MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEP
                     PKYTPRPAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIR
                     SLSV"
     gene            1672..2451
                     /gene="ipaJ"
                     /locus_tag="JN001_001084"
     CDS             1672..2451
                     /gene="ipaJ"
                     /locus_tag="JN001_001084"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     protease IpaJ"
                     /protein_id="HAY9052387.1"
                     /translation="MSEQRKPCKRGCIHTGVMLYGVLLQGAIPREYMISHQTDVRVNE
                     NRVNEQGCFLARKQMYDNSCGAASLLCAAKELGVDKIPQYKGSMSEMTRKSSLDLDNR
                     CERDLYLITSGNYNPRIHKDNIADAGYSMPDKIVMATRLLGLNAYVVEESNIFSQVIS
                     FIYPDARDLLIGMGCNIVHQRDVLSSNQRVLEAVAVSFIGVPVGLHWVLCRPDGSYMD
                     PAVGENYSCFSTMELGARRSNSNFIGYTKIGISIVITNEAL"
     gene            complement(3396..4325)
                     /locus_tag="JN001_001085"
     CDS             complement(3396..4325)
                     /locus_tag="JN001_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Virulence regulon transcriptional activator
                     VirB"
                     /protein_id="HAY9052388.1"
                     /translation="MVDLCNDLLSIKEGQKKEFTLHSGNKVSFIKAKIPHKRIQDLTF
                     VNQKTNVRDQESLTEESLADIIKTIKLQQFFPVIGREIDGRIEILDGTRRRASAIYAG
                     ADLEVLYSKEYISTLDARKLANDIQTAKEHSIRELGIGLNFLKVSGMSYKDIAKKENL
                     SRAKVTRAFQAASVPQEIISLFPIASELNFNDYKILFNYYKGLEKANESLSSTLPILK
                     EEIKDLDTNLPPDIYKKEILNIIKKSKNRKQNPSLKVDSLFISKDKRTYIKRKENKTN
                     RTLIFTLSKINKTVQREIDEAIRDIISRHLSSS"
     gene            complement(4542..4778)
                     /locus_tag="JN001_001086"
     CDS             complement(4542..4778)
                     /locus_tag="JN001_001086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY9052389.1"
                     /translation="MIKEKILSIVAFCYGIAYSKLSEETKFIEDLSADSLSLIEMLDM
                     ISFEFNLRIDESALEHIITIGDLISVVKNSTKSI"
     gene            complement(4782..6683)
                     /gene="ipaA"
                     /locus_tag="JN001_001087"
     CDS             complement(4782..6683)
                     /gene="ipaA"
                     /locus_tag="JN001_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector invasin IpaA"
                     /protein_id="HAY9052390.1"
                     /translation="MHNVNNTQAPTFLYKATSPSSTEYSELKSKISDIHSSQTSLKTP
                     ASVSEKENFATSFNQKCLDFLFSSSGKEDVLRSIYSNSMNAYAKSEILEFSNVLYSLV
                     HQNDLNFENEKGLQKIVAQYSELIIKDKLSQDSAFGPWSAKNKKLHQLRQNIEHRLAL
                     LAQQHTSGEALSLGQKLLNTEVSSFIKNNILAELKLSNETVSSLKLDDLVDAQAKLAF
                     DSLRNQRKNTIDSKGFGIGKLSRDLNTVAVFPELLRKVLNDILEDIKDSHPIQDGLPT
                     PPEDMPDGGPTPGANEKTSQPVIHYHINNDNRTYDNRVFDNRVYDNSYHENPENDAQS
                     PTSQTNDLLSRNGNSLLNPQRALVQKVTSVLPHSISDTVQTFANNSALEKVFNHTPDN
                     SDGIGSDLLTTSSQERSTNNSLSRGHRPLNIQNSSTTPPLHPEGVTSSNDNSSDTTKS
                     SASLSHRVASQINKFNSNTDSKVLQTDFLSRNGDTYLTRETIFEASKKVTNSLSNLIS
                     LIGTKSGTQERELQEKSKDITKSTTEHRINNKLKVTDANTINYVTETNADTIDKNHAI
                     YEKAKEVSSALSKVLSKIDDTSAELLTDDISDLKNNNDITAENNNIYKAAKDVTTSLS
                     KVLKNINKD"
     gene            complement(6692..7690)
                     /gene="ipaD"
                     /locus_tag="JN001_001088"
     CDS             complement(6692..7690)
                     /gene="ipaD"
                     /locus_tag="JN001_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle tip complex
                     protein IpaD"
                     /protein_id="HAY9052391.1"
                     /translation="MNITTLTNSISTSSFSPNNTNGSSTETVNSDIKTTTSSHPVSSL
                     TMLNDTLHNIRTTNQALKKDLSQKTLTKTSLEEIALHSSQISMDVNKSAQLLDILSKK
                     EYPINKDARELLHSAPKEAELDGYEMISHRELWDKIAKSINNINEQYLKVYEHAVSSY
                     TQMYQDFSAVLSSLAGWISPGGNDGNSVKLQVKSLKDELTKLKEKYKDKPLYPANNTV
                     SKEQANKWLTELGGTIGKVSEKNGGYVVNINMTPIDNMLKSLDNLGGNGEVVLDNAKY
                     QAWNAGFSAEDETMKNNLQTLVQKYSNANSIFDNLVKVLSSTISSCTDTDKLFLHF"
     gene            complement(7741..8832)
                     /gene="ipaC"
                     /locus_tag="JN001_001089"
     CDS             complement(7741..8832)
                     /gene="ipaC"
                     /locus_tag="JN001_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS translocon subunit IpaC"
                     /protein_id="HAY9052392.1"
                     /translation="MEIQNTKSAPILYTDISTKQTQSSSETQKSQNYQQLAAHIPLNV
                     GKNPVLTTTLNDDQLLKLSEQVQHDSEIIARLTDKKMKDLSEMSHTITPENTLDISSL
                     SSNAVSLIISVAVLLSALRTAETRLGSQLSLIAFDATKSAAENIVRQGLAALSSSITG
                     AVTQVGITGIGAKKTHSGISEQKGALRKNLATAQSLEKELAGSKLGLNKQIDTNITSP
                     QTNSSTKILGKNKLAPDNISLSTEHKTSLSSPDISLQDKIDTQRRAYELNTLSAQQKQ
                     NIGRATMETSAVAGNISTSGGRYTSALEEEEQLISQASSKQAEEASQVSKEASQATNQ
                     LIQKLLNIIDNINQSRNSTASQIAGNIRA"
     gene            complement(8852..10594)
                     /gene="ipaB"
                     /locus_tag="JN001_001090"
     CDS             complement(8852..10594)
                     /gene="ipaB"
                     /locus_tag="JN001_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocon subunit
                     IpaB"
                     /protein_id="HAY9052393.1"
                     /translation="MHNVSTTTTGLPLAKILASTELGDNTIQAANDAANKLFSLTIAD
                     LAANKNINTTNAHSTSNILIPELKAPKSLNASSQLTLLIGNLIQILGEKSLTALTNKI
                     TAWKSQQQARQQKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQ
                     IQTRLSELAPDSPENKKLRREEIQLTIKKDAAVKDRTLIEQKTLSIHSKLTDKSMQLE
                     KEIDSFSAFSNTASAEQLSTQQKSLTGLASVTQLMATFIQLVGKNNEESLKNDLALFQ
                     SLQESRKTEMERKSDEYAAEVRKAEELNRVMGCVGKILGALLTIVSVVAAAFSGGASL
                     ALAAVGLALMVTDAIVQAATGNSFMEQALNPIMKAVIEPLIKLLSDAFTKMLEGLGVD
                     SKKAKMIGSILGAIAGALVLVAAVVLVATVGKQAAAKLAENIGKIIGKTLTDLIPKFL
                     KNFSSQLDDLITNAVARLNKFLGAAGDEVISKQIISTHLNQAVLLGESVNSATQAGGN
                     VASAVFQNNASKNLADLTLSKYQVEQLSKYIGDAIEKFGQLQEVIAELLASMSNSQAN
                     RTDVAKAILQQTTA"
     gene            complement(10600..11067)
                     /gene="ipgC"
                     /locus_tag="JN001_001091"
     CDS             complement(10600..11067)
                     /gene="ipgC"
                     /locus_tag="JN001_001091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system translocator chaperone
                     IpgC"
                     /protein_id="HAY9052394.1"
                     /translation="MSLNITENESISTAVIDAINSGATLKDINAIPDDMMDDIYSYAY
                     DFYNKGRIEEAEVFFRFLCIYDFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGKN
                     DYTPVFHTGQCQLRLKAPLKAKECFELVIQHSNDEKLKIKAQSYLDAIQDIKE"
     gene            complement(11125..11751)
                     /gene="ipgB"
                     /locus_tag="JN001_001092"
     CDS             complement(11125..11751)
                     /gene="ipgB"
                     /locus_tag="JN001_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgB"
                     /protein_id="HAY9052395.1"
                     /translation="MQILNKILPQVEFAIPRPSFDSLSHNKLVKKILSVFNLKQRFPQ
                     KNFGCPVNINKIRDSVIDKIKDSNSGNQLFCWMSQERTSYVSSMINRSIDEMAIHNGV
                     VLTSDNKKNIFAAIEKKFPDIKLDEKSAQTSISHTALNEIASSGLRAKILKRYSSDMD
                     LFNTQMKDLTNLVSSSVYDKIFNESTKVLQIEISAEVLKAVYRQSNTN"
     gene            complement(11767..12156)
                     /gene="ipgA"
                     /locus_tag="JN001_001093"
     CDS             complement(11767..12156)
                     /gene="ipgA"
                     /locus_tag="JN001_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgA"
                     /protein_id="HAY9052396.1"
                     /translation="MCRKLYDKLYEITGAKLDFNDKNQAFILLEEQIPVCITDNDEYI
                     FLTGLLNEHELFTENIINPEHILILNYSLSRDYGSSICLLPDTHQCVLTKKHYKKYLS
                     PDELIESLYEFLFCIKLTIANITSEVN"
     gene            complement(12169..13653)
                     /gene="icsB"
                     /locus_tag="JN001_001094"
     CDS             complement(12169..13653)
                     /gene="icsB"
                     /locus_tag="JN001_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector IcsB"
                     /protein_id="HAY9052397.1"
                     /translation="MILKISNFIDASNTKGPIRVEDTEHGPILVAQKFNLKDLFFRTL
                     STINAKINSQILNEQLKNYRLANQKSLLLFLKTLASEKSAESAFAAYEAVKNSIQHSF
                     TGKDIKLMLNTAESFHGIGTAKNLERHLVFRCWGNRGITHLGHTSISIKNNLLQEPTH
                     TYLSWYPGGNVTKDTEINYLFEKRSGYSVDTYKQDKLNMISDQTAERLDAGQEVRNLL
                     NSKQDQNNNKKIFFPRANQKKDPYGYWGVSADKVYIPLSGDNKTKDGKISYNLFGLDE
                     TNMSKFICQKKADAFRQLANYKLISKSENCAGMALNVLKAGNSEIYFPLPDVKLVATP
                     NNVYAYANKVRQRIESLNQSYNEIMKYIESDFDLSRLTQLRRSYLKSFNKINLIHTPK
                     TFKPLSISLYKHPTENVSSEDFDAVINACHSYLVKSAPSNMSRVLNELKTGATDKKEV
                     IIEKSIKTIDYYNSLKSPDLGTKLYIHDLLQVNKLLLNNSHSNI"
     gene            13967..15583
                     /locus_tag="JN001_001095"
     CDS             13967..15583
                     /locus_tag="JN001_001095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector inositol
                     phosphate phosphatase"
                     /protein_id="HAY9052398.1"
                     /translation="MHITNLGLHQVSFQSGDSYKGAEETGNQKGVSVISYQRVKNGER
                     NKGVEALNRLYLQNQTSLTGKGLLFARDRAAVFYEAIKLAGGDTSKIKAMMEQLDTYK
                     LGEVDKRNINELNKVISEEIRAQLGIKNKKELQSEIKQIFTNYLNNKNWEPINKNINY
                     NGKNYGFQLTPASHMKIGNKNIFVKEYNGKGICCASTRESKHIANMWLSKVVDDEGKE
                     IFSGIRHGVISAYGLKKNSSERAVAARNKAEELASAALYSRQELLSQALSGKTVDLKI
                     VSTSLLTPTSLTGGEESMLKDQVKALKELNSKRGEPTKLLIRNSDGLLQEVKVNLKVV
                     TFNFGVNELALKMGLGWRNVDKLNGESICSLLGDNFLKNGVIGGWAAEAIEKNPPCKN
                     DVIYLANQIKEILNKKLQKNDNGEPYKLSQRMALLAYTIGAVPCWNCKSGKDRTGMQD
                     AEIKREIIRKHETGQFSQLNSKLSSEEKRLFSTILMNSGNMEIQEMNTGVPGNKVMKK
                     LPLSSLELSYAERIGDPKIWNMVKGYSSFV"
     gene            15593..15955
                     /gene="ipgE"
                     /locus_tag="JN001_001096"
     CDS             15593..15955
                     /gene="ipgE"
                     /locus_tag="JN001_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone IpgE"
                     /protein_id="HAY9052399.1"
                     /translation="MEDLADVICRALGIPSIDTDDQAIMLDDDVLIYIEKEGDSINLL
                     CPFCALPENINDLIYALSLNYSEKICLATDDEGGSLIARLDLTGINEFEDIYVNTEYY
                     ISRVRWLKDEFARRMKGY"
     gene            15955..16413
                     /gene="ipgF"
                     /locus_tag="JN001_001097"
     CDS             15955..16413
                     /gene="ipgF"
                     /locus_tag="JN001_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein IpgF"
                     /protein_id="HAY9052400.1"
                     /translation="MSRFVFIFLCFIPYLGRADCWDKAGERYNIPSSLLKAIAEKESG
                     FNKFAVNVNNNGSKDYGIMQINDFHSKRLREMGYTEEMLISHPCLSVHYAAKLLNEFM
                     LMYGRGWEAVGAYNAGTSPKKKKERLKYAEDIYKRYLRIAAESKQNNRRI"
     gene            16422..17537
                     /gene="mxiG"
                     /locus_tag="JN001_001098"
     CDS             16422..17537
                     /gene="mxiG"
                     /locus_tag="JN001_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiG"
                     /protein_id="HAY9052401.1"
                     /translation="MSEAKNSNLAPFRLLVKLTNGVGDEFPLYYGNNLIVLGRTIETL
                     EFGNDNFPENIIPVTDSKSDGIIYLAISKDNICQFSDEKGEQIDINSQFNSFEYDGVS
                     FQLKNMMEDKSRVHILNGMYNKPSVFFFFAVIVVLIIIFSLSLKKDEVKEIAEIIDDK
                     RYGIVNTGQCNYILAETQNDAVWASVALNKSGFTKCRYILVSNKEINRIQQYINQRFP
                     YINLYVLNLVSDKAELLVFLSKERNSSKDTELEKLKNALIVEFPYIKNIKFNYLSDHN
                     AREDAKGIFTKVNVQYKEICETNKVTYSVREELTDEKLELINRLISDHKNVYGDQYIE
                     FSVLLIDDDFKGKSYLNSKDSYVMLNDKHWFFLDKNK"
     gene            17545..17796
                     /locus_tag="JN001_001099"
     CDS             17545..17796
                     /locus_tag="JN001_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscF/YscF/HrpA family type III secretion system
                     needle major subunit"
                     /protein_id="HAY9052402.1"
                     /translation="MSVTVPDKDWTLSSLSETFDDGTQTLQGQLTSALNALAENPSNP
                     QLLAEYQSKLSEYTLYRNAQSNTVKVIKDVDAAIIQNFR"
     gene            17809..18102
                     /gene="mxiI"
                     /locus_tag="JN001_001100"
     CDS             17809..18102
                     /gene="mxiI"
                     /locus_tag="JN001_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system inner rod protein
                     MxiI"
                     /protein_id="HAY9052403.1"
                     /translation="MNYIYPVNQVDIIKASDFQSQEISSLEDVVSAKYSDIKMDTDIQ
                     VSQIMEMVSHPESLNPESLAKLQTTLSNYSIGVSLAGTLARKTVSAVETLLKS"
     gene            18108..18833
                     /locus_tag="JN001_001101"
     CDS             18108..18833
                     /locus_tag="JN001_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EscJ/YscJ/HrcJ family type III secretion inner
                     membrane ring protein"
                     /protein_id="HAY9052404.1"
                     /translation="MIRYKCFILFLLLMLIGCEQREELISNLSQRQANEIISVLERHN
                     ITARKVDGGKQGISVQVEKGTFASAVDLMRMYDLPNPERVDISQMFPTDSLVSSPRAE
                     KARLYSAIEQRLEQSLVSIGGVISAKIHVSYDLEEKNISSKPMHISVIAIYDSPKESE
                     LLVSNIKRFLKNTFSDVKYENISVILTPKEEYVYTNVQPVKEIKSEFLTNEVIYVFLG
                     MAVLVVILLVWAFKTGGFKRNKI"
     gene            18830..19357
                     /locus_tag="JN001_001102"
     CDS             18830..19357
                     /locus_tag="JN001_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion apparatus protein OrgA/MxiK"
                     /protein_id="HAY9052405.1"
                     /translation="MIRMDGIYKKYLSIIFDPAFYINRNRLNLPSELLENGVIRSEIN
                     NLIINKYDLNCDIEPLSGVTAMFVANWNLLPAVAYFIGSQESRLINHSEMVISYYGGK
                     ISKQGEAAIRSGFWHLIEWKENISVGIYERINLLFNPIALEGNYTPVERNLSRLNEGM
                     QYAKRHFTGIQTSCL"
     gene            19299..19994
                     /locus_tag="JN001_001103"
     CDS             19299..19994
                     /locus_tag="JN001_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858274.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MxiN"
                     /protein_id="HAY9052406.1"
                     /translation="MKVCNMQKGTLPVSRHHAYDGVVIKRIEKELCKTIKDRDTESKK
                     KAICVIKDATKKAESLRIDAVCDGYQIGIQTAFEHIIDYICEWKLKQNENRRNIEDYI
                     TSLLSENLHDERIISTLLEQWLSSLRNTVTELKVVLPKCNLALRKKLELDLHKYRSDV
                     KIILKYSEGNNYIFCSGNQVVEFSPQDVISGVKIELAEKLTKNDKKYFKELAHKKLRQ
                     IAEDLLKENPVND"
     gene            19987..20394
                     /locus_tag="JN001_001104"
     CDS             19987..20394
                     /locus_tag="JN001_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mxi-Spa secretion machinery protein MxiL"
                     /protein_id="HAY9052407.1"
                     /translation="MINQINASNALQQRLNSEEFVNLNERLSSSQSFDENIIYEIMQY
                     FSQSELNSIDNDELHNKIEQLFNSRFPYLTAAQKSSLLNKLIDANQYVDLHEGFYASL
                     SIYNNIDFYIKTTTFDSLISVFEAGREADDSTW"
     gene            20378..20806
                     /gene="mxiM"
                     /locus_tag="JN001_001105"
     CDS             20378..20806
                     /gene="mxiM"
                     /locus_tag="JN001_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858276.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system pilotin MxiM"
                     /protein_id="HAY9052408.1"
                     /translation="MIRHGSNKLKIFILSILLLTLSGCALKSSSNSEKEWHIVPVSKD
                     YFSIPNDLLWSFNTTNKSINVYSKCISGKAVYSFNAGKFMGNFNVKEVDGCFMDAQKI
                     AIDKLFSMLKDGVVLKGNKINDTILIEKDGEVKLKLIRGI"
     gene            20936..21568
                     /gene="mxiE"
                     /locus_tag="JN001_001106"
     CDS             20936..21568
                     /gene="mxiE"
                     /locus_tag="JN001_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional activator MxiE"
                     /protein_id="HAY9052409.1"
                     /translation="MEGFFFVRNQNIKFSDNVNYHYRFNINSCAKFLAFWDYFSGALV
                     EHSHAEKCIHFYHENDLRDSCNTESMLDKLMLRFIFSSDQNVSNALAMIRMTESYHLV
                     LYLLRTIEKEKEVRIKSLTEHYGVSEAYFRSLCRKALGAKVKEQLNTWRLVNGLLDVF
                     LHNQTITSAAMNNGYASTSHFSNEIKTRLGFSARELSNITFLVKKINEKI"
     gene            21555..23255
                     /gene="mxiD"
                     /locus_tag="JN001_001107"
     CDS             21555..23255
                     /gene="mxiD"
                     /locus_tag="JN001_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system secretin MxiD"
                     /protein_id="HAY9052410.1"
                     /translation="MKKFNIKSLTLLIVLLPLIVNANNIDSHLLEQNDIAKYVAQSDT
                     VGSFFERFSALLNYPIVVSKQAAKKRISGEFDLSNPEEMLEKMTLLVGLIWYKDGNAL
                     YIYDSGELISKVILLENISLNYLIQYLKDANLYDHRYPIRGNISDKTFYISGPPALVE
                     LVANTATLLDKQVSSIGTDKVNFGVIKLKNTFVSDRTYNMRGEDIVIPGVATVVERLL
                     NNGKALSNRQAKNDPMPPFNITQKVSEDSNDFSFSSVTNSSILEDVSLIAYPETNSIL
                     VKGNDQQIQIIRDIITQLDVAKRHIELSLWIIDIDKSELNNLGVNWQGTASFGDSFGA
                     SFNMSSSASISTLDGNKFIASVMALNQKKKANVVSRPVILTQENIPAIFDNNRTFYVS
                     LVGERNSSLEHVTYGTLINVIPRFSSQGQIEMSLTIEDGTGNSQSNYNYNNENTSVLP
                     EVGRTKISTIARVPQGKSLLIGGYTHETNSNEIVSIPFLSSIPVIGNVFKYKTRNISN
                     IVRVFLIQPREIKESSYYNTAEYKSLISEREIQKTTQIIPSETTLLEDEKSLVSYLNY
                     "
     gene            23274..24341
                     /gene="mxiC"
                     /locus_tag="JN001_001108"
     CDS             23274..24341
                     /gene="mxiC"
                     /locus_tag="JN001_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system gatekeeper subunit
                     MxiC"
                     /protein_id="HAY9052411.1"
                     /translation="MLDVKNTGVFSSAFIDKLNAMTNSDDGDETADAELDSGLANSKY
                     IDSSDEMASALSSFINRRDLEKLKGTNSDSQERILDGEEDEINHKIFDLKRTLKDNLP
                     LDQDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVESLTKIINEIISGSEKSVNAG
                     INSAIQAKLFGNKMKLEPQLLRACYRGFIMGNISTTDQYIEWLGNFGFNHRHTIVNFV
                     EQSLIVDMDSEKPSCNAYEFGFVLSKLIAIKMIRTSDVIFMKKLESSSLLKDGSLSAE
                     QLLLTLLYIFQYPSESEQILTSVIDVSRASHEDSVVYQTYLSSVNESPHDIFKSESER
                     EIAINILRELVTSAYKKELSR"
     gene            24354..26414
                     /gene="mxiA"
                     /locus_tag="JN001_001109"
                     /gene_synonym="virH"
     CDS             24354..26414
                     /gene="mxiA"
                     /locus_tag="JN001_001109"
                     /gene_synonym="virH"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein MxiA"
                     /protein_id="HAY9052412.1"
                     /translation="MIQSFLKQVSTKPELIILVLMVMIIAMLIIPLPTYLVDFLIGLN
                     IVLAILVFMGSFYIERILSFSTFPSVLLITTLFRLALSISTSRLILVDADAGKIITTF
                     GQFVIGDSLAVGFVIFSIVTVVQFIVITKGSERVAEVAARFSLDGMPGKQMSIDADLK
                     AGIIDAAGAKERRSILERESQLYGSFDGAMKFIKGDAIAGIIIIFVNLIGGISVGMSQ
                     HGMSLSGALSTYTILTIGDGLVSQIPALLISISAGFIVTRVNGDSDNMGRNIMSQIFG
                     NPFVLIVTSALALAIGMLPGFPFFVFFLIAVTLTALFYYKKVVEKEKSLSESDSSGYT
                     GTFDIDNSHDSSLAMIENLDAISSETVPLILLFAENKISANDMEGLIERIRSQFFIDY
                     GVRLPTILYRTSNELKVDDIVLLINEVRADSFNIYFDKVCITDENGDIDALGIPVVST
                     SYNERVISWVDVSYTENLTNIDAKIKSAQDEFYHQLSQALLNNINEIFGIQETKNMLD
                     QFENRYPDLLKEVFRHVTIQRISEVLQRLLGENISVRNLKLIMESLALWAPREKDVIT
                     LVEHVRASLSRYICSKIAVSGEIKVVMLSGYIEDAIRKGIRQTSGGSFLNMDIEVSDE
                     VMETLAHALRELRNAKKNFVLLVSVDIRRFVKRLIDNRFKSILVISYAEIDEAYTINV
                     LKTI"
     gene            26427..26828
                     /gene="spaK"
                     /locus_tag="JN001_001110"
     CDS             26427..26828
                     /gene="spaK"
                     /locus_tag="JN001_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system chaperone SpaK"
                     /protein_id="HAY9052413.1"
                     /translation="MSNINLVQLVRDSLFTIGCPPSIITDLDSHSAITISLDSMPAIN
                     IALVNEQVMLWANFDAPSDVKLQSSAYNILNLMLMNFSYSINELVELHRSDEYLQLRV
                     VIKDDYVHDGIVFAEILHEFYQRMEILNEVL"
     gene            26832..28124
                     /locus_tag="JN001_001111"
     CDS             26832..28124
                     /locus_tag="JN001_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliI/YscN family ATPase"
                     /protein_id="HAY9052414.1"
                     /translation="MSYIKLLTQLSFPNRISGPILETSLSDVSIGEICNIQAGIESNE
                     IIARAQVVGFHDEKTILSLIGNSRGLSRQTLIKPTAQFLHTQVGRGLLGAVVNPLGEV
                     TDKFAVTDNSEILYRPVDNAPPLYSERAAIEKPFLTGVKVIDSLLTCGEGQRMGIFAS
                     AGCGKTFLMNMLIEHSGADIYVIGLIGERGREVTETVDYLKNSEKKSRCVLVYATSDY
                     SSVDRCNAAYIATAIAEFFRTEGHKVALFIDSLTRYARALRDVALAAGESPARRGYPV
                     SVFDSLPRLLERPGKLKAGGSITAFYTVLLEDDDFADPLAEEVRSILDGHIYLSRNLA
                     QKGQFPAIDSLKSISRVFTQVVDEKHRIMATAFRELLSEIEELRTIIDFGEYKPGENA
                     SQDKIYNKISVVESFLKQDYRLGFTYEQTMELLGETIR"
     gene            28217..28555
                     /gene="spaM"
                     /locus_tag="JN001_001112"
     CDS             28217..28555
                     /gene="spaM"
                     /locus_tag="JN001_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface presentation of antigens protein SpaM"
                     /protein_id="HAY9052415.1"
                     /translation="MEALDKRIIYFLQLENDLEPVGAQSVSQLFNTRRKIAIVKKHII
                     QYQSERILLKGRIEEIQKDIDEANASKRKLLHKESKICKRIGLIKRNNFAKQLILDEL
                     SQEDMKYGIR"
     gene            28542..29420
                     /gene="spa32"
                     /locus_tag="JN001_001113"
     CDS             28542..29420
                     /gene="spa32"
                     /locus_tag="JN001_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system needle length
                     regulator Spa32"
                     /protein_id="HAY9052416.1"
                     /translation="MALDNINLNFSSDKQIEKCEKLSSIDNIDSLVLKKKRKVEIPEY
                     SLIASNYFTIDKHFEHKHDKGEIYSGIKNAFELRNERATYSDIPESMAIKENILIPDQ
                     DIKAREKINIGDMRGIFSYNKSGNADKNFERSHTSSVNPDNLLESDNRNGQIGLKNHS
                     LSIDKNIADIISLLNGSVAKSFELPVMNKNTADITPSMSLQEKSIVENDKNVFQKNSE
                     MTYHFKQWGAGHSVSISVESGSFVLKPSDQFVGNKLDLILKQDAEGNYRFDSSQHNKG
                     NKNNSTGYNEQSEEEC"
     gene            29414..30295
                     /gene="spaO"
                     /locus_tag="JN001_001114"
     CDS             29414..30295
                     /gene="spaO"
                     /locus_tag="JN001_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000944309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system protein SpaO"
                     /protein_id="HAY9052417.1"
                     /translation="MLRIKHFDANEKLQILYAKQLCERFSIQTFKNKFTGSESLVTLT
                     SVCGDWVIRIDTLSFLKKKYEVFSGFSTQESLLHLSKCVFIESSSVFSIPELSDKITF
                     RITNEIQYATTGSHLCCFSSSLGIIYFDKMPVLRNQVSLDLLHHLLEFCLGSSNVRLA
                     TLKRIRTGDIIIVQKLYNLLLCNQVIIGDYIVNDNNEAKINLSESNGESDHTEVSLAL
                     FNYDDINVKVDFILLEKKMTINELKMYVENELFKFPDDIVKHVNIKVNGSLVGHGELV
                     SIEDGYGIEISSWMVKE"
     gene            30300..30950
                     /gene="spaP"
                     /locus_tag="JN001_001115"
     CDS             30300..30950
                     /gene="spaP"
                     /locus_tag="JN001_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaP"
                     /protein_id="HAY9052418.1"
                     /translation="MLSDMSLIATLSFFTLLPFLVAAGTCYIKFSIVFVMVRNALGLQ
                     QVPSNMTLNGIALIMALFVMKPIIEAGYENYLNGPQKFDTISDIVRFSDSGLIEYKQY
                     LKKHTDLELARFFQRSEEENADLKSAENNDYSLFSLLPAYALSEIKDAFKIGFYLYLP
                     FIVVDLVISSILLALGMMMMSPITISVPIKLVLFVALDGWGILSKALIEQYINVPA"
     gene            30965..31225
                     /gene="spaQ"
                     /locus_tag="JN001_001116"
     CDS             30965..31225
                     /gene="spaQ"
                     /locus_tag="JN001_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaQ"
                     /protein_id="HAY9052419.1"
                     /translation="MSDIVYMGNKALYLILIFSLWPVGIATVIGLTIGLLQTVTQLQE
                     QTLPFGIKLIGVSISLLLLSGWYGEVLLSFCHEIMFLIKSGV"
     gene            31225..31995
                     /gene="spaR"
                     /locus_tag="JN001_001117"
     CDS             31225..31995
                     /gene="spaR"
                     /locus_tag="JN001_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858288.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     protein SpaR"
                     /protein_id="HAY9052420.1"
                     /translation="MDISSWFESIHVFLILLNGVFFRLAPLFFFLPFLNNGIISPSIR
                     IPVIFLVASGLITSGKVDIGSSVFEHVYFLMFKEIIVGLLLSFCLSLPFWIFHAVGSI
                     IDNQRGATLSSSIDPANGVDTSELAKFFNLFSAVVFLYSGGMVFILESIQLSYNICPL
                     FSQCSFRVSNILTFLTLLASQAVILASPVMIVLLLSEVLLGVLSRFAPQMNAFSVSLT
                     IKSLLAIFIIFICSSTIYFSKVQFFLGEHKFFTNLFVR"
     gene            32002..33030
                     /gene="spaS"
                     /locus_tag="JN001_001118"
     CDS             32002..33030
                     /gene="spaS"
                     /locus_tag="JN001_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system export apparatus
                     switch protein SpaS"
                     /protein_id="HAY9052421.1"
                     /translation="MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISF
                     FSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKIIGFPLFFCVLSAVLPTLVQTKF
                     VLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
                     SQVFSSVDGLYLIWGGLFKDIILFFLAFSIFVIILDFVIEFILYMKDMMMDKQEIKRE
                     YIEQEGHFETKSRRRELHIEILSEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPF
                     ISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFVDFEHLDEVLRLIVW
                     LEQVENTH"
     gene            33043..33285
                     /locus_tag="JN001_001119"
     CDS             33043..33285
                     /locus_tag="JN001_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052422.1"
                     /translation="MCYMGVNFCNKIGIDQSEFEIESSIINSIANEVLNPISFLSNKD
                     IINVLLRKISSECDLVRKDIYRCALELVVEKTPDDL"
     gene            complement(33862..>34135)
                     /locus_tag="JN001_001120"
     CDS             complement(33862..>34135)
                     /locus_tag="JN001_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY9052423.1"
                     /translation="ELTGKALFMALRSQRPPAGLIHHTDRGSQYCAYDYRVIQEQSGL
                     KTSMSRKGNCYDNAPMEIFWGTLKNESLSHYRFKSRDISSAYGKTD"
BASE COUNT        10621 a         5012 c         6852 g        11650 t
ORIGIN      
        1 aaccgagaga gaacgaatga atgccctgag aatggtcatt ccgccacgat atccctggtc
       61 tctgatctcg cgagcgatta ccgttgccgg gattttgtaa ggatgagcat cggcgatgcg
      121 ttgacgaata taatcccggt attcatccag gagtgaagca acagcaggtc gcggcgtata
      181 ttttggcggc tcagattttg cctgcaaata acgtttaacg gtattgcggg agagccccag
      241 ttctctggca atcgcccggc tactcattcc ctgcttgtgc aggattttaa tttccataac
      301 tgtctcaaaa gtgaccataa gctctcctga atcaggagag cagattaccc cctggatctg
      361 atttcaggcg ttgggtgtgg atcactattg caccgttcgt gacacttgtt gactgcctgt
      421 gcggcatctg gtatcaaggt ggcgtgaagc cggttcaggt tctcatgcgg aacgttggaa
      481 cctatatccc cccgatacca aaggcgaaat gtaagtgaca aaatgcaatg aacacgttct
      541 ccgttaactg aggagcatgg tgataaataa aggtaaatgc agaaggtgta gagtctcgca
      601 gatttctgac atcatagagc ctaacattag atgcataacg ctacagattg tagaatctct
      661 acaggtgaaa tatacactgg ttggcgttta tgtcgcaaaa catgtcattc aggttcatct
      721 caccaataag gatatgagtg aagtggagga taagtgagtc tgctgtcaga gttttctggt
      781 gtatgtcagt aactgcagaa ccatgtctgc ttgatatggg agcttatgga ggctctctgt
      841 acaaggttag ggagctaaca aagcagggat aaaaagtccg cctgatgcag gcacggttcg
      901 ttaaatcttt tgccattggt aacaaaatgg tgcgatgaat gttcaggcta tctttatctt
      961 gatggtggtt cagctgtttg gtaaagaaat cgctgtaaca atagaagaac tgcaggcagt
     1021 actggtccca cattgtttgc tcagtcaact ggtgaagttc cgtagcgcgt aaattaatgc
     1081 tttgcatgaa acgttactgg agtggatgaa agaatacctg catatatcat tactgcgttg
     1141 gattaccagt acaacagatt gaatgaactg gacatgttga tagacggcat tgaaaagcag
     1201 cttataagca tagtgcggca gagttaattg gagagcactt cgccttctga gtattaagta
     1261 atcatggtgg tacctgcgga tactatctat tcactgtgct cggtcggcag ccttactgac
     1321 caaggagttg ggggagttga taacaaagtt gaaaaaacag ctctcaacca aggtggttat
     1381 tgtaacaata gcaaataagc tggtgtgacc tgtatcacaa taaccgatta tggacgtaaa
     1441 tacgacaaaa atatgtcagt atcaggcggt attaattgct gatgctgatg gacattaact
     1501 cttaataaaa gggtggatgc tgaaaggttg ttatggtgac ggacgtgatg acgacggaaa
     1561 agagtatgag gttttggatt taaagttcgt tcggggaata aggacccggt cagctaattc
     1621 tcatagtagt tcgcattgct ggatgcaata ctgtgctgca attactcgtc gatgtcggaa
     1681 caacggaagc cttgcaaacg gggatgtatt catacaggtg ttatgttata tggggtttta
     1741 ttgcaggggg ctataccaag agaatatatg atatctcatc agactgatgt gagggtaaat
     1801 gagaatagag taaacgaaca aggttgtttt ttggcgagga agcagatgta tgacaattct
     1861 tgtggagctg ccagtttact ctgtgctgca aaggaattag gggttgataa aataccacaa
     1921 tacaaagggt ctatgtccga aatgacaagg aagagttctc ttgatttgga taatcgttgt
     1981 gagcgggatt tatacttaat aactagtggt aattataatc cgagaataca caaagataat
     2041 atcgcggatg ccggttattc tatgcctgat aagatagtca tggctacgag gcttcttgga
     2101 ttgaatgctt atgtcgttga agaaagtaac attttttcgc aagtaattag ttttatttat
     2161 cccgatgcaa gggacttatt aattggcatg ggatgtaata tagtacatca acgagatgtg
     2221 ttatcttcta accaaagagt tttggaagct gttgctgtat cctttattgg agttcctgtc
     2281 ggcctccact gggtgttgtg tagacctgat ggaagctata tggatccagc tgtaggagaa
     2341 aattattctt gtttttcaac tatggaatta ggtgcaagaa gaagtaattc taactttata
     2401 ggatatacta aaataggtat ttccatagtt ataactaatg aggctttgta aattgtcgtt
     2461 ttttatctgt gaaggagctt gaatattttg gggcgggggg cataacaaat gatattactg
     2521 agtacaaatt tagctatatt gggcggatta gttgtgtggg aagacgaaat gtttctcttg
     2581 aaataagtga actccctcaa ggaatgattg tgtgcttaaa tatttaagtg ctggtaagtt
     2641 tgagaaggct gacatatttt gcagagcaaa cagtgattga cttggatgat atttttattt
     2701 tagtcactcg ttgtaattgg agtatgcttt attttatttg aaaatagatg tattttatac
     2761 ccgcaattta aattgtaagc cctatgaggg gtatggatat tataagttac tctttgacta
     2821 agcataactt ttggggttag aaaaataaat ctcttgttaa taattaatat gattttaaaa
     2881 tcaaacttgt ttataattat aaaataatgt aagtcggtca ttttatggga agattaggag
     2941 aataaaacag taattatatt tgagaaatct gctaatatat tcttaaagct tttttgatac
     3001 tgtgaacgaa gtctgttaat ggtggatttt ttgtttatca ccatgtaaaa aaattgagta
     3061 gtaaaagcgt tgactgctaa tcctcgctgt ttttattgaa acgattaaaa atacgctgaa
     3121 tattttcggc cagtcactca tcttcacata aaattttgac catcatgccg catcccttag
     3181 ttgcacaatt cattttcaat gatatgaata ttactaattt caccagataa tgttctcgtg
     3241 gtcagcaggg tatgagtttt caccgtaatt ttaaggaaac acagtgcgtg gggattgaat
     3301 aacagatagc cgacggaatt accccaccgg ctgaaagtca agttcaacga agatttttat
     3361 tatctgaatt gggcagttta catcagtgtt cgagtttatg aagacgatag atggcgagaa
     3421 attatatctc gaatagcttc atctatttct ctctgaactg ttttgtttat tttagataat
     3481 gtaaatatta gagttctgtt tgttttattc tcttttcttt ttatgtaagt ccgtttgtct
     3541 ttagaaataa ataacgagtc aacttttagc gaagggtttt gctttctgtt tttgcttttc
     3601 tttatgatgt ttaaaatttc ttttttatat atgtccgggg gcaaatttgt atcaaggtct
     3661 tttatttctt cctttaatat tggtagtgta gaactaagag attcattagc cttttcaagt
     3721 cctttataat aattgaataa tatcttgtag tcattaaagt taagttctga cgcgattgga
     3781 aatagagata ttatttcctg tggaacgctt gctgcctgaa aggcacgagt gactttcgcg
     3841 cgagacagat tctctttttt ggctatgtct ttataggaca tccctgatac tttcagaaaa
     3901 ttaagaccaa taccaagttc tcggatgcta tgctcttttg ctgtttgtat atcgtttgct
     3961 agttttctgg catcaagagt agatatatat tcttttgaat atagaacttc aagatctgct
     4021 cctgcatata ttgcagatgc tcttctacga gtgccatcca gaatttcaat tctaccatca
     4081 atctcccttc ctattacagg gaagaattgt tgtagcttta tagtttttat gatatcggct
     4141 aatgattctt ctgttaggga ttcttgatcg cgtacattcg ttttttggtt gacgaaggtt
     4201 aaatcttgga tccttttatg aggaatcttg gctttgataa aggaaacttt attaccagaa
     4261 tggagtgtaa actctttctt ttggccttcc tttatactta acaagtcgtt gcacaaatcc
     4321 accatatcac accctgttta ttcatattga tttatattga caaaagttaa atgcagtgtg
     4381 agcaagattg tatgtaactg ttgatgatag tcaacggtag tcttaaaaat tactatttta
     4441 atagctggat tgatgcaatt tatctttatt ggataaaaga ataatattct tgtggagctc
     4501 tgatgtgaga gctccataga tgaaaaaatg cttatcaatt actatattga ttttgtacta
     4561 tttttgacta cagaaataag atctccaata gtaataatgt gttctaatgc agattcatct
     4621 atacgtagat tgaactcaaa actaatcata tccagcattt caatcagaga aagagaatcg
     4681 gcagaaagat cttcaataaa tttagtttct tcagatagtt tgctgtacgc tataccatag
     4741 caaaaggcca ctattgataa tattttttct tttatcatat tttaatcctt attgatattc
     4801 tttaatactt ttgataggga agtggttaca tcttttgctg ctttatatat attattgttt
     4861 tcagctgtaa tatcattgtt attttttaaa tcagatatat catctgtaag taattctgca
     4921 gaggtatcgt caatttttga caataccttg ctgagggcgc tagatacttc ttttgccttt
     4981 tcatagatcg catgattttt atcaattgta tctgcgttgg tttctgttac gtagtttatt
     5041 gtatttgcat ctgtaacttt taatttgttg tttattctgt gttctgttgt ggattttgta
     5101 atgtcctttg atttttcctg taactctcgt tcttgtgttc ctgatttagt tccaatgaga
     5161 gatataagat tacttaggga gtttgttact ttttttgaag cttcaaatat cgtttcccgt
     5221 gttaaatatg tgtctccatt tcttgataaa aaatcagtct gaagtacttt tgaatcagtg
     5281 tttgagttga atttattgat ttgcgaagct actctatgag aaagagaagc gctactttta
     5341 gttgtatctg atgagttatc attactgctt gtcactcctt ccgggtggag agggggggtg
     5401 gttgaagagt tctgtatgtt cagaggcctg tgtccccgag aaagagagtt atttgtagat
     5461 ctttcttgac tactcgtagt taacaggtct gaacctattc catccgaatt atctggagta
     5521 tggttgaaaa ccttttctaa agctgaatta tttgcaaatg tctggacagt atctgatata
     5581 gagtgtggta gaacggaagt tactttttga actagtgctc tttgtggatt tagtaatgag
     5641 tttccgttac gggataatag atcgtttgtc tgagaagtag gagactgtgc atcattttct
     5701 gggttctcgt gatagctatt gtcatatact ctgttgtcaa aaactctatt atcgtaagtt
     5761 ctattatcat tatttatatg atagtgaatt acaggttggg atgttttctc attggctccg
     5821 ggggttggtc cgccatctgg catatcttcg ggaggtgtag ggaggccatc ttggatagga
     5881 tgcgaatctt ttatatcttc taaaatatca ttaaggactt ttctcaacag ctcaggaaac
     5941 acggctactg tatttaagtc tcttgacagt ttacctatac caaatccttt actatcaata
     6001 gtatttttac gttgattgcg caaactatca aaggcaagtt ttgcctgtgc gtcaactaaa
     6061 tcatctagtt tgagagatga aacagtttca ttacttaact ttaattcagc aagaatatta
     6121 ttcttgataa atgatgatac ttcagtattg aggagttttt gtcccaatga taaagcttca
     6181 ccagatgtgt gttgttgtgc taatagtgca agtctgtgct caatgttttg tcgtaattga
     6241 tggagtttct tattctttgc cgaccatggt ccaaaggcag aatcttggga taatttatct
     6301 tttataatta gttccgaata ctgtgcgaca attttttgaa gtcccttttc gttttcaaaa
     6361 ttaagatcat tttgatgtac taaggagtac aaaacatttg aaaattcgag aatctcgctt
     6421 ttggcatacg cattcattga gttggaataa atgcttctta acacatcttc tttccctgag
     6481 gaagaaaata aaaaatcaag acatttctga ttaaaagacg ttgcaaagtt ttctttttca
     6541 gacactgatg ctggtgtttt tagagaagtt tgcgaactat ggatatcgga tattttgctt
     6601 tttaactcgc tgtattctgt tgatgatggt gaagttgcct tatataagaa tgttggcgct
     6661 tgagtattat ttacattatg catggcgcac ctcagaaatg gagaaaaagt ttatctgtat
     6721 ctgtacatga gcttattgta ctactcaaaa cctttactaa attatcaaaa atactattgg
     6781 cattactgta tttttgaact aaagtttgaa gattattttt cattgtttca tcttcggcag
     6841 agaatccggc attccatgcc tgatattttg cattatctag cacaacctcg ccatttccac
     6901 ctagattatc taagcttttt aacatattgt ctattggggt catgtttata ttgacaacat
     6961 atcccccgtt tttttcagat accttgccga ttgttccacc taattctgta agccatttat
     7021 ttgcttgttc cttactaaca gtattatttg ctggatatag cggtttatct ttatattttt
     7081 ccttgagctt tgtcaattcg tctttaagcg atttgacttg taatttcacg gagtttccgt
     7141 cgttacctcc gggagagatc cagccggcaa gactggaaag aacagcgcta aaatcttgat
     7201 acatttgagt atatgaacta acggcatgtt catatacttt cagatactgt tcattaatat
     7261 tattgattga ctttgcaatt ttatcccaca gttctctgtg agatatcatt tcatatccat
     7321 caagctcggc ttctttcggg gctgaatgta ataattctct tgcgtcttta ttaattggat
     7381 attctttctt ggaaagaata tccaatagtt gagcggattt gtttacatcc atgctaatct
     7441 gagatgaatg taatgctatt tcttctagcg atgttttagt caacgttttt tgtgagagat
     7501 ctttctttaa tgcctgattt gttgttctga tattatgaag ggtgtcgttg agcatagtaa
     7561 gggaacttac aggatgagaa ctggtcgttg tttttatatc agaattaact gtttcggttg
     7621 atgaaccgtt ggtattgttt gggctgaatg atgaggtgga aatactatta gtcagagttg
     7681 ttatattcat ggttatttcc ttataggaag agccatatat tattatggct cttggatata
     7741 ttaagctcga atgttaccag caatctgact ggctgtagaa ttccttgatt ggttgatgtt
     7801 gtcaattata ttcaataatt tttgtattaa ttgatttgtc gcttgggatg cttctttaga
     7861 tacttgggat gcttcctctg cttgtttact gctggcctga ctgattagtt gttcttcttc
     7921 ttcaagagca gatgtataac gccctcctga tgtggatata ttaccagcaa cggctgatgt
     7981 ctccattgtt gcacggccaa tgttttgttt ttgctgagca gaaagggtat tgagctcgta
     8041 agctcttctc tgggtgtcaa ttttatcctg caaagaaata tcgggagaac taagagaagt
     8101 tttatgttca gttgacaggg atatattatc tggtgccagt ttatttttac ctaaaatttt
     8161 tgtgctagag ttagtttgtg gtgaggtgat atttgtatct atttgtttat ttaaccctaa
     8221 tttagaacct gcaagctctt tttcaagaga ttgagcagtg gcaaggttct ttcttaaggc
     8281 tcctttttgt tcgctaatcc ctgaatgcgt ttttttggca ccgatacccg ttatacctac
     8341 ttgtgtgacc gctccagtaa tgcttgatga tagggctgct aggccttgcc gaacaatgtt
     8401 ctctgcagct gattttgtag catcgaacgc aatcaatgac aattgagagc ccaatctagt
     8461 ttctgcagtg cggagagcag aaagtagaac ggctacacta ataattaaag aaacagcatt
     8521 agaagaaaga ctggaaatat ccagggtgtt ctctggggta attgtgtgac tcatttctga
     8581 aagatctttc atctttttgt cagtaaggcg agcaatgatt tctgaatcat gctgaacctg
     8641 ctctgataac tttaaaagtt gatcatcatt taatgtagtt gttaatacgg gatttttacc
     8701 gacattaagt ggaatatgtg ctgctaactg ctgataattt tgtgattttt gtgtttcgga
     8761 agaactttga gtttgttttg tagatatatc tgtatataaa atcggggctg attttgtgtt
     8821 ttgaatttcc ataacattct ccttatttgt atcaagcagt agtttgttgc aaaattgctt
     8881 ttgcaacatc agttctatta gcctgagagt tggacattga ggctaacagc tctgcaatta
     8941 cttcctgcaa ttggccgaat ttttctattg cgtcaccgat gtattttgac agttgttcaa
     9001 cttgatattt cgataatgtc aggtctgcta gatttttcga cgcgttgttt tggaaaacag
     9061 cagaagcgac atttcctccc gcttgtgtgg cagagttaac actttctcct aataaaactg
     9121 cttggtttaa atgggtggaa ataatttgtt tggatattac ttcatcaccc gctgcaccaa
     9181 gaaatttatt taatctggca acagcattag tgattaaatc gtccagttga gaagaaaaat
     9241 tcttgagaaa ctttggtata aggtctgtga gggttttacc tattattttg ccaatattct
     9301 ctgcaagttt tgctgctgcc tgtttaccaa cagtggctac gagaacgact gctgcaacca
     9361 agacaagagc gcctgcgatt gcccccagaa tagagccaat cattttggct tttttcgagt
     9421 cgacgcccaa gccttcgagc atttttgtaa atgcatctga aaggagtttg attaagggtt
     9481 caatgactgc tttcatgatc ggattcaggg cttgttccat gaaggaattg ccggtcgctg
     9541 cttgtactat agcatccgta accataagag ctaaaccaac agctgccagt gctagagatg
     9601 ctcctccaga aaaagctgct gcaacaacac taacgatagt taaaagtgcc ccaagtattt
     9661 tcccaacaca acccattact ctgttgagtt cttctgcttt acgtacttca gcagcatact
     9721 catcagattt tctctccatt tcagtttttc ttgattcttg gagagactgg aatagagcca
     9781 gatcattttt taaagattct tcattatttt ttccaactag ttgaataaag gttgccatca
     9841 attgagtaac actggcaagt ccggttaatg atttctgctg ggttgatagc tgttcagcag
     9901 atgctgtgtt tgaaaatgca gaaaaagagt ctatttcttt ttcgagttgc attgatttat
     9961 ctgtaagttt gctatgaatt gacagagttt tctgctcaat caatgtcctg tctttaactg
    10021 ctgcgtcttt tttgatagtg agttgtattt cttcccgtct taatttttta ttttctggtg
    10081 aatctggggc gagttcggat aatcttgttt gaatttggtt aattttattt tctaggtctt
    10141 ttattttaga atctgcgttt tttagtttat taatttgttt ttcatagtct ctggttagtc
    10201 cttcagtttc agatagaaga gtattaattt tatcggagaa ttctaggttt ttttgctgtc
    10261 ttgcctgttg ttgggacttc caggcagtaa ttttatttgt taatgcagtt aaagattttt
    10321 caccaagtat ttgaataagg tttccaatta aaagcgttag ttgggaactt gcatttaatg
    10381 actttggtgc tttaagttca gggattaata tattcgaagt tgagtgtgca ttagttgtat
    10441 taatattttt gttagcagca agatcagcaa ttgtaagaga aaataatttg ttagctgcat
    10501 catttgcagc ctggatagta ttgtctccaa gctcagtgga agccaatatt ttggcaagag
    10561 gcaaaccagt ggttgtggtg cttacattat gcataataat tactccttga tatcctgaat
    10621 tgcgtctaag tatgattgtg cttttatttt taatttttca tcattgctgt gttgaattac
    10681 gagttcgaag cactctttgg ctttcaaggg ggctttcaac cgaagctggc attgtccagt
    10741 atggaatacc ggtgtatagt cattttttcc taatgcaaaa gcgacagcat aaaggtctgc
    10801 tgcttgttgg aactgttctt ttatctgata aatagctgcg agtcccataa tgtagtctac
    10861 attgtaaaag tcgtatatac ataaaaatct gaagaaaact tcagcttcct ctattcttcc
    10921 tttgttgtaa aagtcataag catatgaata aatgtcatcc atcatatcat caggaattgc
    10981 attaatatct ttcagtgtag cgccagagtt aattgcatca attactgcag tagagatgct
    11041 ttcattttca gtgatattta aagacataag gtctcctttt tgtctgcatt actttaataa
    11101 gtataagatt taatataaac agatttaatt tgtattgctt tgacggtata cagcctttag
    11161 aacctctgcg cttatttcta tttgtaaaac ttttgttgat tcattaaata ttttatcgta
    11221 gacggaactg gatactagat ttgtaagatc cttcatttgt gtgttaaaca aatccatgtc
    11281 actgctataa cgttttaaaa tctttgctct gaggccagat gaggcaatct cgtttagtgc
    11341 tgtatgactg atagatgttt gtgctgattt ttcatcaagt tttatatccg ggaatttttt
    11401 ttcaatagct gcaaatatgt tttttttgtt atctgaggtc aaaacaactc cattgtgtat
    11461 ggccatttca tctatacttc tgtttatcat tgaagagaca taagaggttc gctcttggct
    11521 catccaacaa aatagttgat tccccgaatt actatctttt attttgtcta tgacgctgtc
    11581 cctgatttta tttatattca ccgggcatcc aaaattcttc tgaggaaagc gttgttttaa
    11641 gttaaaaaca gataatattt tctttacaag cttattgtga cttaacgaat caaatgatgg
    11701 gcgaggaatc gcgaattcaa cctgtggaag tattttgttt agaatttgca tgataccccc
    11761 tatatgttag ttcacttctg aagtgatgtt tgcaatggtt agtttaatac aaaataaaaa
    11821 ttcgtacaaa gattcaatga gttcatcagg tgaaagatat tttttgtagt gtttcttggt
    11881 caaaacacat tgatgagtat cagggagaag acagatagaa gaaccataat ctctactcaa
    11941 agagtagtta aggatgagta tgtgttctgg attaataata ttttctgtaa aaagttcatg
    12001 ttcattaaga agtccggtca aaaagatgta ttcatcatta tctgttatac aaacaggtat
    12061 ttgttcttcg agcaatataa aggcttgatt tttatcgtta aaatcaagct ttgcacctgt
    12121 tatttcataa agtttatcat atagtttgcg acacatttct atggccttct atatattaga
    12181 atgagagtta ttcaataaaa gcttattgac ctgtaataag tcgtgaatgt aaagtttggt
    12241 tccaagatct ggcgatttaa gagaattgta ataatcaata gtttttattg acttttcgat
    12301 aattacttct tttttatctg ttgctccggt ttttaattcg tttaatacac gagacatatt
    12361 gctgggtgct gattttacta agtatgagtg gcaagcgttg atgaccgcat caaagtcttc
    12421 tgaagataca ttttcagtag gatgtttgta aagtgaaatt gataaaggct tgaatgtttt
    12481 tggggtgtgg ataaggttaa ttttattgaa acttttaaga tagctacgtc gtaattgagt
    12541 caatctggaa agatcaaaat cagattcaat atacttcatt atctcgttat aagactgatt
    12601 gagactttca atgcgttgcc taactttatt tgcatacgcg tatacattgt taggtgtagc
    12661 aaccaattta acgtcaggga gtggaaagta tatttcagaa tttcctgctt taagaacatt
    12721 aagtgccata ccagcacagt tttcagattt actgattaat ttataatttg ccaattgtct
    12781 gaaagcatct gctttctttt ggcatataaa ttttgacatg tttgtttcat caaggccaaa
    12841 aaggttatag ctgattttac catcctttgt tttattatca cctgataatg gaatgtatac
    12901 tttatcagca ctgacccccc aataaccata gggatctttt ttttgattag ctctgggaaa
    12961 aaatattttt ttgttgttat tttgatcttg ttttgaattt aataagtttc taacctcttg
    13021 gcctgcatca agtctttcgg ctgtttggtc tgaaatcata tttagtttgt cttgtttata
    13081 ggtatcgaca ctgtaacctg agcgtttttc aaaaaggtag tttatttctg tatcttttgt
    13141 aacattcccg ccgggatacc agctgagata ggtatgagtt ggttcctgta gtaaattgtt
    13201 ttttatactg atactggtat gccctaaatg ggttatgcct ctatttcccc agcaacgaaa
    13261 cactaaatgt ctttcaagat ttttggctgt accgatgcca tgaaaactct ctgcggtatt
    13321 caacattaat ttgatgtctt tacctgtaaa agaatgttga attgaatttt tgactgcttc
    13381 ataggcggca aacgcacttt ctgcagattt ttcgctagct aatgtcttga ggaaaagcaa
    13441 taaggatttt tgattcgcta gtcgataatt ttttagttgt tcatttaata tctgtgaatt
    13501 tatctttgca ttaatagtgc ttaatgttct gaaaaagaga tcctttaggt tgaatttctg
    13561 tgctaccaat ataggtccat gctctgtatc ttcaacgcgt ataggccctt ttgtattgct
    13621 tgcgtcaatg aaattgctaa ttttgagaat catactttat taactctcca ttacgtggtg
    13681 attgtgggga tgtaaaatgt atttgatata taatatattc aattaataaa tttagaaact
    13741 tgagcctgtt aacataatca aattttcttt tgctgtacat aatatgtacc tcgtgagcat
    13801 atgtagtgct ggtttcatca tgaaatccca caagttaaag tgtctgatat atcaggctcg
    13861 gagtgttata gaaaaagaga gaaccctgtt gaataagtat cttttttgtt gtaaaacgag
    13921 gtacaaaact gcaatcaatg ccccatttat gactgaggat aattaaatgc acataactaa
    13981 tttgggattg catcaggttt catttcaaag cggagattcc tataaaggcg cagaagaaac
    14041 cggaaaccaa aaaggtgtaa gcgtgatttc atatcaaaga gttaaaaatg gagagagaaa
    14101 taagggggtc gaagcgctta atcgattata tttacagaac caaacaagct taacagggaa
    14161 aggccttttg tttgcgcgtg acagagctgc agttttttac gaggcaataa agttggcagg
    14221 tggtgatacg tcaaaaatta aagccatgat ggaacaatta gatacctata aacttggtga
    14281 agttgataaa agaaatatta atgagcttaa taaagtaata agtgaagaga taagagcaca
    14341 gctaggcatt aaaaataaaa aggaattgca atcggaaata aaacaaatat ttactaatta
    14401 tttaaataat aagaattggg aaccgatcaa caaaaatatt aattataatg ggaaaaatta
    14461 tggttttcaa ttaacacccg cctctcatat gaagataggg aataaaaata tatttgtcaa
    14521 agagtataat ggaaaaggaa tttgttgtgc ttctacgaga gagagtaagc atattgcgaa
    14581 tatgtggctt tcaaaagtgg tggatgacga ggggaaggaa attttttcgg gtatcagaca
    14641 tggagttata tcagcctatg gattgaaaaa aaactcatct gaaagagctg ttgcagctcg
    14701 taataaagct gaggagttag caagcgcagc attatatagc agacaagaat tattatcaca
    14761 ggctttgtct ggtaaaacag tagatttaaa gattgtttcg acttctcttc tgacgccgac
    14821 cagtttaact gggggagagg agagtatgtt aaaagatcag gtaaaggcat taaaagagtt
    14881 aaactctaaa aggggggaac caacgaaatt attaattcgg aatagtgatg gtcttctgca
    14941 agaagtaaag gttaatctaa aagtggtgac atttaacttt ggtgtaaatg aattagcgct
    15001 aaaaatgggc ttaggctgga ggaatgttga caagcttaat ggtgaatcaa tatgttcttt
    15061 gttgggggat aatttcctca aaaatggtgt gattggaggt tgggctgcag aagctataga
    15121 aaaaaatcca ccatgtaaga atgatgtgat atatctggct aaccagataa aagagattct
    15181 aaacaagaag ttacaaaaga atgataatgg agagccgtat aaattgtcac aaagaatggc
    15241 tctattggct tatactatag gtgctgtacc ttgctggaat tgtaagagtg ggaaggacag
    15301 aacaggtatg caggatgctg aaattaaaag agaaataata agaaaacatg aaacagggca
    15361 gttttctcaa ttaaatagta aattatcctc agaagagaaa agattatttt ctactattct
    15421 aatgaatagt ggtaatatgg aaatccaaga gatgaatact ggtgtgcctg gaaataaagt
    15481 tatgaaaaaa ttaccgctat cttcgttaga gctgtcttat gctgaaagaa taggggaccc
    15541 caaaatatgg aatatggtga aagggtattc gtcatttgta taagaggaat atatggaaga
    15601 tttagcagat gttatttgcc gagccttggg tatcccttca attgataccg atgatcaagc
    15661 aatcatgctt gatgatgatg tgttaatata tattgaaaaa gaaggagatt caataaattt
    15721 attatgccct ttttgtgcat tgcctgaaaa tataaatgat cttatatatg cgttgagcct
    15781 aaattactca gaaaagatat gtttagctac tgatgatgaa ggtggaagtc taattgcgcg
    15841 attagatctt accgggataa atgaattcga ggatatatat gttaatacag aatattatat
    15901 ttcgcgtgtg cgttggctga aggatgaatt tgcgcgaaga atgaaggggt attaatgtcc
    15961 cgtttcgtat ttatttttct gtgttttatc ccatatttag ggagagctga ttgttgggat
    16021 aaggctggtg aaaggtacaa cattccatcg agtttgttaa aagcgattgc ggaaaaagaa
    16081 tccggattta ataaatttgc agtcaatgtt aataacaatg gaagtaaaga ttatggtata
    16141 atgcaaataa atgactttca ttctaaaaga cttagagaaa tgggatatac tgaggaaatg
    16201 ctaattagtc atccatgtct ttctgtacat tatgcagcaa agttattaaa tgagtttatg
    16261 ctgatgtatg gaagagggtg ggaggctgtt ggtgcctata atgcaggaac atctccgaaa
    16321 aagaaaaaag aaagattaaa gtacgcagag gatatctata aacgctattt gcggatagca
    16381 gcagagagca agcagaataa tcgaaggata taagaggatt tatgtctgag gcaaagaact
    16441 caaatcttgc accattcagg ttattagtga aactcacaaa cggtgtcggg gatgagtttc
    16501 cgttatatta tgggaataac ttaattgttc tcggacggac gatagaaaca cttgagtttg
    16561 gaaacgataa tttcccagaa aatattattc cagtaacaga tagtaaatcg gatggtataa
    16621 tttatttggc cataagtaaa gataatatct gtcaatttag tgatgaaaaa ggtgaacaaa
    16681 ttgatatcaa ttcacaattt aactcatttg aatatgacgg agtttctttt caacttaaaa
    16741 atatgatgga ggataaatcg agagttcata tactaaacgg aatgtataat aaaccctcgg
    16801 tgtttttttt ctttgctgtt attgttgtgt taattataat tttttccctc tctttaaaga
    16861 aagatgaagt aaaagaaatt gctgaaatta tagatgataa gagatatgga atagtcaaca
    16921 caggacagtg caattatatt cttgccgaaa cacaaaatga tgcggtatgg gcatctgtag
    16981 ccttaaataa aagcggattt accaaatgca gatatattct ggtgtccaac aaagaaataa
    17041 atagaattca acaatatatc aatcaacgat tcccatatat caatttgtat gtgttgaatt
    17101 tagtgagtga taaagcggaa ttactggtat ttttaagtaa agaaagaaat agttcaaaag
    17161 ataccgaact tgagaaattg aaaaatgctc tgatagttga atttccgtat atcaaaaata
    17221 ttaaattcaa ctatcttagc gatcataatg caagggagga tgctaaaggt attttcacaa
    17281 aggtaaatgt ccagtataaa gagatttgtg aaactaataa agttacatat tctgtcagag
    17341 aagaactgac agatgaaaag cttgagctca ttaatagact gatttctgat cataaaaatg
    17401 tatatggaga tcagtatatt gagttttctg tacttttgat agatgatgat tttaaaggta
    17461 aatcatatct taacagcaaa gacagttatg taatgttgaa tgataaacac tggttttttt
    17521 tagataaaaa taagtgagga taaaatgagt gttacagtac cggataaaga ttggactctg
    17581 agttcattat ctgaaacttt tgatgatgga actcaaacat tacaagggca actaacatcg
    17641 gcactaaatg cattagctga aaatccttcg aatccacagt tgctggctga ataccaaagt
    17701 aaattatctg aatatacatt atataggaac gcgcaatcta atactgtgaa agtgattaag
    17761 gatgttgatg ctgcaattat tcaaaacttc agataatagg gagcattcat gaattacatt
    17821 tatccagtca atcaggttga tattatcaaa gccagtgatt ttcaatctca agagatatca
    17881 agcctggaag acgtcgtgtc ggctaaatat agtgatatta agatggatac agatattcaa
    17941 gtatcacaaa taatggagat ggtaagccat ccagaatcat taaacccaga atctttggcc
    18001 aagttacaga cgacgctctc aaattattca ataggagtat cattagctgg cacgttagca
    18061 agaaaaacag tttcggctgt tgaaacttta ttaaagtctt aatttatatg attaggtata
    18121 aatgttttat tttattcttg ttgctgatgt tgattggatg tgagcaacgt gaagagttaa
    18181 tttctaattt atctcaaaga caggcaaatg aaataatatc tgtgctagaa cgccataata
    18241 ttactgctag aaaagttgat ggaggtaaac aggggatctc ggtacaagtc gaaaagggga
    18301 catttgcatc ggcagttgat ttgatgcgca tgtacgattt gccaaatccg gagagagttg
    18361 atatctcaca aatgtttcct acagattcat tagtgtcttc tccaagagct gaaaaggccc
    18421 gtttatatag tgctattgag caacggctgg aacagtcttt agtttctatt ggtggtgtta
    18481 tttcggcaaa aatacatgtt agctatgatc ttgaagaaaa aaatatatct tcaaaaccga
    18541 tgcatatatc agtaatcgct atatatgact caccgaaaga gtctgaacta ttagttagta
    18601 atattaagcg atttttgaaa aacacctttt ctgatgttaa gtatgaaaat atatctgtca
    18661 tattaactcc gaaagaagaa tatgtttata caaatgtaca acctgttaag gaaattaaat
    18721 cggaattttt aacaaatgaa gtaatatatg tatttctcgg gatggctgta ctagttgtca
    18781 ttcttttggt atgggcattc aaaacagggg ggttcaagag aaacaaaata tgataagaat
    18841 ggatggaatt tataaaaaat atctttcaat aatttttgat ccagcgttct atataaatag
    18901 aaatcggttg aatttgcctt ctgaactgtt agaaaatggc gtaatcagaa gtgagattaa
    18961 taatctcata attaacaaat atgatctaaa ttgcgatatt gaacctttaa gcggggtaac
    19021 cgctatgttt gttgccaact ggaatttact tccagctgtt gcttatttta tcggtagtca
    19081 agagtctcgg ttaattaatc atagtgagat ggttattagt tattatgggg gcaaaatcag
    19141 taagcaaggg gaggccgcta ttcgaagtgg tttttggcat cttattgagt ggaaggaaaa
    19201 tatatctgtt ggtatatatg aaagaataaa cttattattt aatccaattg ctttggaggg
    19261 aaattatacg cctgtagaaa gaaatttgtc ccgattaaat gaaggtatgc aatatgcaaa
    19321 aaggcacttt accggtatcc agacatcatg cctatgatgg tgttgttata aagagaattg
    19381 aaaaggaatt atgtaaaacc ataaaagata gagacactga gagtaagaag aaagcaattt
    19441 gtgttataaa ggatgctacg aaaaaagctg aatcactgcg tatagatgct gtatgcgatg
    19501 gttatcaaat tggtatacag actgcttttg agcatattat tgactatatt tgtgaatgga
    19561 agttaaagca aaatgaaaac agaagaaata ttgaggacta tataactagt ttgctttcag
    19621 aaaatttaca tgatgagagg atcattagca ctttattgga gcagtggctt agttcgttgc
    19681 gtaatacagt aacagaatta aaagtggttt tgcccaagtg taatttagca ctgaggaaaa
    19741 agttagaact tgatctccat aaatatcgct cagatgtcaa gattatttta aaatattctg
    19801 aagggaataa ttatatattc tgtagtggta atcaagtagt ggagtttagt cctcaggatg
    19861 taatatcagg tgttaaaata gaacttgcgg aaaaattaac aaaaaatgat aaaaaatatt
    19921 tcaaagagtt agcacataag aaactgagac aaattgcaga agacttgtta aaagagaatc
    19981 ctgttaatga ttaatcaaat aaatgcaagc aatgctctgc agcaaagatt aaatagtgaa
    20041 gaatttgtta atttaaatga gagattatca tcttcgcaat catttgatga gaatataatc
    20101 tatgaaataa tgcaatattt ctcacagagt gaattaaatt ccatagataa tgatgaactg
    20161 cacaataaga ttgaacaatt attcaattca cgttttcctt atcttacagc tgcacaaaaa
    20221 agttcacttc ttaataaact catagatgca aatcaatatg tcgatttgca tgagggattt
    20281 tatgcatcat tgtccatata taacaatatt gatttctata ttaagactac aaccttcgat
    20341 tcattaatta gtgtctttga agcagggaga gaggcagatg attcgacatg gtagtaataa
    20401 gttgaaaata tttattttaa gtatattgct attaacactg agtgggtgtg ctttaaagtc
    20461 atcatctaat tctgaaaaag aatggcatat tgttcctgta agtaaggatt atttttctat
    20521 tccaaatgat ttattatggt cgtttaatac aaccaataaa agtataaatg tttactctaa
    20581 atgtattagt ggtaaggcgg tttatagttt taatgcaggt aaattcatgg gcaactttaa
    20641 tgttaaggaa gtagatgggt gcttcatgga tgcacaaaag atagctatag ataaactatt
    20701 ttctatgctg aaagacgggg ttgttttaaa aggtaataag ataaatgata ccatccttat
    20761 agagaaggat ggggaagtta aattaaaatt aattcgaggg atataattgt attgtgagta
    20821 aatataaagg tctaaataca agtaatatgt tttacattta ctctagtgga cataaaccag
    20881 ttaacgttga gcttgtaaaa gataaagaac gtaacataat tgagctggct ccagcatgga
    20941 agggtttttt tttgtccgaa atcaaaatat aaaattcagt gataatgtga actatcatta
    21001 tcgctttaac attaatagtt gtgcaaaatt tcttgctttt tgggactatt tcagtggtgc
    21061 tctagtagag catagccatg ctgaaaaatg tattcatttc tatcatgaga atgatcttcg
    21121 ggatagttgt aataccgaat cgatgcttga taagttaatg ttaagattca tcttttcatc
    21181 tgaccagaat gtaagtaatg cactggctat gatacgaatg actgagtcat atcatttggt
    21241 tctttatctt ctgagaacta ttgagaaaga aaaggaggta agaataaaga gtctgacaga
    21301 gcattatggt gtgtcggagg cttattttag atctttatgt agaaaagctt taggggcaaa
    21361 agtcaaagaa caactgaaca cttggcggtt agtaaatggt ttattagatg tatttttgca
    21421 caatcaaaca atcacttctg ctgccatgaa taatgggtat gcatcaacat cccatttttc
    21481 aaatgagata aaaacacgac taggcttttc tgcaagagaa ttatcgaata ttactttttt
    21541 agtgaaaaaa ataaatgaaa aaatttaata ttaaatcttt gactctcttg attgtattgt
    21601 taccattgat agttaatgct aataatattg actctcattt attagaacaa aatgacatag
    21661 cgaaatatgt tgctcaaagt gatacggtag gatctttttt tgaacgtttt tctgcgttat
    21721 taaattatcc tattgttgtt agcaaacaag ctgcaaaaaa gagaatatct ggggagtttg
    21781 atttatctaa tccagaagaa atgcttgaaa aaatgacatt acttgtggga ctcatatggt
    21841 ataaagatgg aaatgcatta tacatatatg actctggaga attaataagc aaagttattt
    21901 tgctggagaa tatatcactt aattatctta ttcagtatct gaaggatgct aacctttatg
    21961 atcacagata tcctataaga ggaaacatta gtgataaaac attctatata tctggtcctc
    22021 cggcattggt tgaactggta gctaatacag caactttgct tgataagcag gtttcttcta
    22081 ttgggacaga taaagttaat tttggggtta taaaattaaa aaatacattt gttagtgaca
    22141 gaacttataa tatgagaggg gaggatattg tcatcccagg ggtggctact gttgtagaac
    22201 gtttattaaa taatggtaag gctctgagta acagacaagc caaaaatgat ccgatgccac
    22261 cctttaatat tacacagaaa gtatctgagg atagtaatga cttttcattt agttcagtta
    22321 ccaatagttc tatattagag gatgtatcac ttattgcata tccagaaacc aattctatat
    22381 tagtcaaagg taatgatcag caaatacaga ttattcgcga tattatcact cagttagatg
    22441 tagccaaacg acatatagaa ttatcattat ggataatcga tattgataaa tctgaattaa
    22501 ataaccttgg cgttaattgg caaggaacgg cttcatttgg tgattcgttt ggtgcatcat
    22561 ttaatatgag ctcatcagca tcgataagca ctttggacgg caataagttt attgcttcag
    22621 ttatggcatt aaatcagaaa aagaaagcaa atgtagtttc aaggccggtg attttgacac
    22681 aagagaatat tccggctata tttgataata acaggacttt ttatgtgtca ttagttggtg
    22741 agcgcaattc ttcgttggag catgttacgt atggaacatt gataaatgtt atacctcgct
    22801 tttcatctca gggacaaatt gagatgtctt taacgataga ggatggaaca ggaaatagtc
    22861 agtcaaatta caattataat aatgaaaata catctgtcct tccagaagtt ggaaggacca
    22921 aaatcagtac aatagcgaga gttccacaag gcaaaagttt gttgataggt ggttatacgc
    22981 atgaaacgaa ctctaacgaa atagtatcta ttccttttct ctcctctatt cctgtaatcg
    23041 gtaatgtgtt caagtataaa acaaggaata tcagtaatat tgtaagggtt tttctgattc
    23101 aaccccgtga gataaaggag tcaagttatt ataatactgc agaatataag agcctcatat
    23161 ctgaaagaga aatacaaaag actacacaaa taatcccatc tgaaactact ttgctggaag
    23221 acgaaaaatc attggtttca tacttaaatt actaactata aagtaggtga tgtatgcttg
    23281 atgttaaaaa tacaggagtt tttagctctg cattcattga taagttgaat gcaatgacaa
    23341 attcagatga tggagatgag actgctgatg cagagcttga ttctggcttg gctaatagca
    23401 agtatattga ctcatctgat gagatggctt ccgctctttc gtcatttata aacagaagag
    23461 accttgagaa actgaaagga acaaatagtg atagtcagga acgtatttta gatggggaag
    23521 aagatgaaat taatcacaag atttttgatt taaagagaac tttaaaagat aaccttcctc
    23581 tagatcagga ttttatagac agactaaaga gatattttaa agatccaagt gatcaagtct
    23641 tagcattaag ggaacttttg aatgaaaaag atcttactgc tgaacaagtc gaatcattaa
    23701 ctaaaattat taatgagata atatcaggta gtgaaaaaag tgttaatgct ggaataaatt
    23761 cagctataca ggctaaatta tttggcaaca aaatgaaact tgaaccgcag cttttgcgtg
    23821 catgttatcg tggttttatc atggggaaca tatcaacaac agatcagtat atagaatggc
    23881 ttggtaattt tggttttaat cacagacata caattgtgaa ttttgtagag cagtcactga
    23941 ttgtagacat ggattctgag aaaccgagct gtaatgctta tgagtttggt tttgtgttat
    24001 ctaaattaat tgcaattaag atgattagaa cttcagatgt aatttttatg aagaaactgg
    24061 aatcctcaag cttgctaaaa gatggcagtt taagtgcaga gcagctattg ctaactttat
    24121 tatatatttt tcaatatcca agtgaaagtg agcaaattct tacttctgtt atagacgtat
    24181 cacgagccag tcatgaggat tctgtagtgt atcaaacata tctatcttct gttaatgaaa
    24241 gtcctcatga tatatttaaa agtgaaagtg aaagagaaat tgcgatcaat attctacgag
    24301 agcttgtcac aagtgcatac aagaaagagc tttctagata acaggagatg aaagtgatcc
    24361 agtcttttct taagcaagta agtactaagc ctgaattaat tatattagtg cttatggtta
    24421 tgatcattgc tatgttgatc ataccattac ctacatacct tgttgatttt ttaatagggc
    24481 ttaatattgt acttgctatt ctcgttttta tgggatcatt ttatattgaa agaatattga
    24541 gtttttctac attcccttcg gttttgttga taacgacatt atttcgtctc gctttatcaa
    24601 taagtactag tcgactaatt ttagttgatg cggatgcggg taaaattatt actacatttg
    24661 gccagtttgt cattggtgat agtctggctg taggttttgt tattttttca atagtaactg
    24721 ttgtgcagtt cattgttata acaaaaggat ctgaaagggt tgcggaggta gctgctcgct
    24781 tttctcttga cggtatgccg gggaaacaaa tgagcattga tgcggattta aaggctggaa
    24841 ttattgatgc cgcaggagct aaagaaagac gcagtattct ggaacgtgag agtcaattgt
    24901 atggttcatt tgatggagca atgaagttca ttaaaggtga tgcaattgct ggcatcatta
    24961 ttatttttgt caatttaata ggaggtattt ctgttggtat gagtcaacat ggaatgtctc
    25021 tatctggtgc attatctact tataccatac taactattgg tgacggattg gtctctcaga
    25081 ttcctgctct gttaatttct ataagtgcag gatttatcgt tacaagagtt aatggtgata
    25141 gcgataatat gggacgtaac ataatgtccc agatatttgg gaatcctttt gttctcattg
    25201 ttacatcagc tcttgccttg gcgataggga tgttgccagg ttttccgttt tttgtttttt
    25261 tcctgatagc agttactttg acggctttat tctattataa aaaggtcgta gaaaaagaaa
    25321 aaagtctgtc tgagtctgat tctagtggct atactggtac atttgatatt gataatagcc
    25381 atgactcatc tttggcaatg atagaaaatc tggatgctat tagttcagaa accgttcctt
    25441 taattttatt atttgccgaa aataagataa gtgcaaatga tatggaaggt cttattgaaa
    25501 ggataagaag tcagttcttt attgattatg gtgtcaggct tccaactatt ttatatagaa
    25561 caagcaatga gcttaaggtc gatgatattg ttttgttaat aaatgaggtg cgtgccgata
    25621 gttttaatat atactttgac aaagtgtgta ttacagatga aaatggagat atagatgctc
    25681 taggtattcc tgttgtttca acttcatata atgaacgtgt tatttcttgg gtagacgttt
    25741 catatacaga aaatctaact aatattgatg ctaaaattaa aagtgctcaa gatgaatttt
    25801 atcaccagtt gtcacaagct ttattaaaca acataaatga gatttttggt atacaagaaa
    25861 caaaaaatat gttagatcag tttgaaaatc ggtatcctga tctattaaag gaagtcttcc
    25921 gacatgtgac tatacagaga atttctgagg tattacaaag attgcttgga gaaaatattt
    25981 ctgttcgcaa tttaaaactt attatggagt ctttggcgct ttgggctccc agagaaaaag
    26041 atgtcataac attagttgaa catgtccgtg catcactttc taggtatatt tgtagtaaaa
    26101 tagctgtttc tggtgagatt aaagttgtga tgctttccgg atatattgag gatgcaataa
    26161 gaaaagggat aaggcaaacc tctggtggct ctttcttgaa tatggatata gaggtttcgg
    26221 atgaggtaat ggaaacttta gcacatgctt tgagagaatt gagaaatgca aaaaaaaatt
    26281 tcgttctttt ggtatcagta gatatacgta ggtttgttaa aagacttata gataacagat
    26341 ttaagagtat actcgttata tcgtatgctg agattgatga agcatatacc attaatgtat
    26401 taaagactat ttagtgaggt ttaaatatga gtaacattaa tttagttcaa ttagttagag
    26461 atagtctttt cacgattggt tgtcctccat caattattac agatttagac agccattcag
    26521 cgattaccat ttctttggat agtatgcctg ctattaatat agctcttgtc aatgagcagg
    26581 ttatgttatg ggctaatttc gatgcaccaa gtgatgtaaa acttcagtca tctgcttata
    26641 acatattaaa tttaatgtta atgaacttta gttatagcat taatgagctg gtagagcttc
    26701 atcgttctga tgagtactta cagttaagag ttgttattaa agatgactac gttcacgatg
    26761 ggattgtttt tgcagagatt ctgcatgagt tttatcagag gatggaaatc ttaaatgagg
    26821 tcttataatc aatgagctat ataaaattgc tcactcaatt atcttttcct aatagaatct
    26881 cggggccaat cttggaaaca agtcttagcg atgtttcgat tggtgagatt tgtaacattc
    26941 aggctggaat tgaaagtaat gaaattattg caagagctca ggttgtagga tttcatgatg
    27001 aaaaaacaat attaagcttg attggaaatt ctcgtggact ttcacggcaa acgttgatta
    27061 agcccactgc ccagtttctt catacgcaag tcggccgtgg attattggga gcagtagtca
    27121 atcctttagg ggaggttact gataagtttg ctgttacgga taacagtgaa attctttatc
    27181 gacctgtaga taatgctcct ccgctatata gtgaaagggc tgcaattgag aagccttttt
    27241 taacaggtgt taaggttatt gattctttac tcacgtgtgg tgaaggacag cgaatgggga
    27301 tttttgcgtc agctggttgt ggcaaaactt ttctcatgaa tatgctcatt gaacatagtg
    27361 gtgctgatat atatgttatt gggttaattg gtgagcgagg tcgagaggtt acagaaacgg
    27421 ttgattattt gaaaaactct gagaaaaaaa gcaggtgtgt tttagtatat gcaacttcgg
    27481 attactcttc ggttgatcgt tgtaatgctg catatatagc cactgctata gccgaatttt
    27541 ttaggactga aggacataaa gtagcgcttt ttattgattc attaacaagg tatgccagag
    27601 cattacgtga tgtggcctta gccgctggag aatcacctgc cagaagaggc tatccggttt
    27661 cggtttttga tagcttaccc agacttcttg aaaggccagg aaagttaaag gcaggtggct
    27721 ctattactgc attttacact gttcttttgg aggatgatga ttttgctgat ccattagctg
    27781 aagaggtaag atccatttta gatggacata tatatttgag cagaaatcta gcccaaaaag
    27841 gacaatttcc tgcaattgat tccttaaaaa gtataagcag ggtatttaca caggttgttg
    27901 atgaaaaaca tcgtattatg gccactgcat ttcgggagct actttctgaa atagaagagc
    27961 taaggacaat tattgacttt ggtgaataca aaccggggga gaatgcctct caggataaaa
    28021 tctacaacaa aatatctgtt gttgagagtt ttctgaagca agattatcga ctcggtttta
    28081 cttatgagca gacaatggag cttcttggtg aaacaattag ataaggtttt aaaaatcaaa
    28141 gataaatatc aacggtctgt taaattaatt gaagcacaca tattaacact aaaaaaaaaa
    28201 ctctttgtat cgagatgtgg aggcattaga taaaaggatt atatacttcc tgcaactgga
    28261 gaatgacttg gaacctgtag gcgctcagag tgttagtcag cttttcaata caagacgtaa
    28321 gatcgctata gtaaaaaagc atattatcca atatcagtct gaacgaattc ttctaaaggg
    28381 aagaattgaa gaaattcaaa aagatattga tgaggcaaat gcttctaaaa gaaaactgct
    28441 tcataaagag agtaaaatat gtaaacggat tggcttgatt aaaagaaata actttgccaa
    28501 acagttgata cttgatgagt tatcacaaga ggatatgaag tatggcatta gataatataa
    28561 acctaaattt tagtagtgac aaacagatag aaaaatgtga gaaactatct tcaatagata
    28621 atattgatag tctcgttttg aagaagaaga ggaaggttga aattcctgag tactctttaa
    28681 ttgcatctaa ctattttact attgataagc actttgaaca taagcatgat aaaggagaaa
    28741 tttatagtgg cattaaaaat gcgttcgaac ttagaaacga acgagcgaca tattctgata
    28801 ttccagaatc aatggccatt aaagaaaata ttttgatacc agatcaagat atcaaagcaa
    28861 gggaaaaaat aaatatcggc gatatgaggg ggatcttttc atataataag agtggaaatg
    28921 cagacaagaa cttcgaaaga agtcatactt cttctgtaaa ccctgataac ctgctagaat
    28981 ctgataatag aaatggtcaa attggtttaa aaaatcatag cttgtctatt gataagaata
    29041 ttgctgacat catttcttta ctaaatggaa gtgttgctaa atcatttgag ctgcctgtaa
    29101 tgaataaaaa tactgcagac ataaccccat ccatgtcatt gcaagaaaaa tcaatagttg
    29161 aaaatgataa aaatgttttt caaaaaaata gtgaaatgac ttaccacttt aaacagtggg
    29221 gggctggaca ttctgttagt atttcagtgg agtctggttc ttttgttcta aaaccgtcag
    29281 atcaatttgt aggaaataaa cttgacttaa ttttgaaaca agatgctgag ggtaattaca
    29341 gatttgatag cagtcaacat aataagggga ataaaaataa tagtacagga tataatgaac
    29401 agagtgaaga agaatgctaa gaattaaaca ttttgacgct aacgaaaaac tacagatttt
    29461 atatgcaaag caactctgcg agcgtttttc gattcagaca ttcaaaaata aatttacagg
    29521 cagtgaaagt ttagtcactc ttacttccgt gtgtggggat tgggtaattc gtattgatac
    29581 attatctttt ttgaaaaaaa aatacgaggt attttcagga ttttctacac aagaatcttt
    29641 actgcattta tcaaaatgtg tctttataga gtcgtcatct gtattttcga ttccagaact
    29701 gtctgataag attactttcc ggatcacgaa tgaaatccag tatgcaacta ctgggagtca
    29761 tttatgctgt ttttcctctt ctttaggtat tatttatttt gacaagatgc cggtattacg
    29821 taatcaagtt tctcttgact tattgcatca tcttttagag ttttgcttag gttcatctaa
    29881 tgtaaggctg gctactttaa aaagaattcg tactggtgat ataatcatag ttcagaaact
    29941 ttataattta ttattgtgta atcaagttat tattggggat tatattgtga atgataataa
    30001 tgaggcaaaa attaatctgt cagaaagtaa tggtgagtca gatcacacag aagtttcttt
    30061 ggcattattc aattatgatg atatcaatgt aaaagtggac tttatccttt tagaaaaaaa
    30121 gatgacaatc aatgaactaa aaatgtatgt agaaaacgaa ttattcaagt ttcccgatga
    30181 catagttaaa catgtaaata ttaaagtaaa tggttctttg gttgggcatg gggaacttgt
    30241 ttctattgag gatggttatg gtatcgagat tagttcttgg atggtaaagg agtaatctca
    30301 tgctgagtga tatgtccctc atcgctacac tttctttttt tacgctatta ccatttttag
    30361 ttgctgctgg tacttgttat ataaagtttt ctattgtttt tgtaatggta cgaaatgcac
    30421 ttggtttgca gcaggttcca tcaaatatga ctctcaatgg tattgcattg attatggctt
    30481 tgttcgtgat gaaacccatt attgaagctg gttatgaaaa ttatctaaat ggcccgcaaa
    30541 aatttgatac aatatcagat attgtccgtt tttctgattc tggcttgatt gaatacaagc
    30601 aatacttgaa aaagcataca gatcttgagt tggcacgttt tttccaaagg tctgaagaag
    30661 aaaatgctga tttaaagagt gcagagaata atgattattc attgttttcc ctcttgcctg
    30721 catatgcgct aagtgaaatt aaagatgcgt tcaaaatagg tttttattta tatttgccat
    30781 ttattgttgt tgatcttgtt atttcaagca ttttacttgc acttggtatg atgatgatga
    30841 gtccaatcac aatatcagta ccaataaaac ttgtattatt tgttgcgctt gatgggtggg
    30901 ggatcctgtc taaggccttg attgaacaat atatcaatgt tcctgcttag atgatggagg
    30961 taatgtgtct gatatagttt atatgggtaa taaggctctt tatttaatcc ttatcttttc
    31021 cttatggcca gtaggtatag ctacggttat tggattaact attggtttat tacagacagt
    31081 gactcaactt caagagcaga cacttccttt tggtataaag cttataggtg tctcaatatc
    31141 tttgctactt ctttctggat ggtatggtga ggttttattg tctttttgtc atgaaataat
    31201 gtttttaatt aagagtgggg tttgatggac atttcaagct ggttcgaaag tattcatgtg
    31261 tttttaatac tcctgaacgg cgtttttttt agattggctc cattattttt ctttcttcca
    31321 tttttaaata acggtataat ttctccatct attagaatac ctgtgatttt tcttgttgca
    31381 tcaggattaa ttacttctgg taaggtagac ataggttctt ctgtttttga acatgtttat
    31441 ttccttatgt tcaaggaaat aattgttggc ctccttctct ctttttgctt gtctcttccc
    31501 ttttggatat ttcatgctgt tggtagtatt attgacaacc agcgtggggc aacgcttagt
    31561 agttcaattg atcctgccaa tggtgttgat acgtctgaat tggcaaaatt tttcaatctt
    31621 ttttctgcag ttgtatttct atacagtggt ggaatggtct ttattttaga atccatacaa
    31681 ttgtcttata atatatgccc gttattttct caatgttctt tccgtgtctc aaatatctta
    31741 acatttctga ctttattggc aagtcaggct gttattttag ccagtcctgt tatgatagta
    31801 ttgttactat cagaagtatt acttggtgta ttatcgagat ttgctccgca gatgaatgct
    31861 ttttccgtat cattaactat taaaagttta cttgcaatat ttattatttt catctgttct
    31921 tctactattt acttttctaa agttcaattt ttcctcggtg aacataaatt tttcacaaat
    31981 ctatttgtta gataaaatat tatggcaaat aaaacagaaa agccgacacc taaaaaacta
    32041 aaggatgccg caaaaaaagg acagtcattt aaatttaagg atttaacgac agttgttatt
    32101 attctggtag ggacatttac tataatatca ttcttttcct taagtgatgt aatgctctta
    32161 tacagatatg taataattaa tgacttcgaa attaatgagg gtaaatactt ttttgcagtg
    32221 gttattgtct tttttaagat aattggcttc ccactttttt tctgtgttct ttcggctgtg
    32281 ttgccaacat tggttcaaac aaagtttgtt cttgcgacta aagctatcaa gattgatttt
    32341 tcagtattaa accctgttaa agggttaaaa aaaatattta gtataaagac aataaaagaa
    32401 tttttcaaaa gcattctgct tcttattatt ctagcattaa caacctattt cttttggatt
    32461 aatgaccgaa aaataatttt ttctcaggtg ttttctagtg ttgatggctt atatcttatt
    32521 tggggggggc tatttaagga tataatatta tttttcttag cattttctat ttttgttatt
    32581 attcttgact ttgtgattga gttcatttta tacatgaaag atatgatgat ggataaacag
    32641 gagataaaaa gagaatatat agagcaagag ggacactttg agacaaagtc gagaaggcgt
    32701 gagttgcata tcgagattct ttcagagcag actaaatctg atatacgtaa ttcaaaatta
    32761 gtggtaatga acccgactca tattgcaatt ggtatttatt ttaatccaga aatagcgcct
    32821 gcacctttta tttctctcat tgaaactaac cagtgtgcct tggctgtcag aaaatatgca
    32881 aatgaagttg gtataccaac tgtgcgtgat gtgaaattag ctagaaaact atataaaaca
    32941 catacaaaat atagttttgt tgattttgaa cacttggatg aagtcctacg tcttattgtt
    33001 tggcttgagc aggttgaaaa cactcattaa taagtaaagg agatgtgtta tatgggagtt
    33061 aatttctgta ataaaatagg tattgatcag tctgaatttg aaatagaatc ttccatcatt
    33121 aactccattg ctaatgaggt attgaaccca atatctttcc ttagcaacaa ggatataata
    33181 aatgttttac tcagaaagat ttcatctgaa tgtgacctgg ttagaaaaga catttatcgt
    33241 tgtgctcttg agttggtcgt tgaaaaaaca cctgatgatt tataatcatt cataataact
    33301 cttttgttga tataaatatt tttgttgaag atatttatgt agtcacagga tcaattgtag
    33361 aaaattgtta tgtttttgtt aggaactgaa ctaaataata tatgataaga cagcaaaaac
    33421 gactgaccat aatccttctt ttattaggag ttgataagag agactattca tcctgtaatg
    33481 ttaaaactct gttatatagt attcgcgatt atgcaaagtc tgtaaatgat catgagatac
    33541 taaccgagag taatcgttta ttatctcatt gcatttcaga tagtaacgga gctttcttta
    33601 aaagtagtaa atacgttccc cttaagtact tacgtaaaag gagaatagca cgaaagatac
    33661 caaatgatta gcactttgct agtaagcttg ctggtaaact atattgaccg ttgggtttgt
    33721 tttgagactg taatttaaat tgtgtaattg cctgtttttg atatgtttac tccaacaacg
    33781 gagacaggta aattatggac gaaaagaagc ttaaagccct tgcggctgaa ctggctaaag
    33841 gcctcaaaac tgaggccgac ctcaatcagt tttcccgtat gctgacgaaa tatcccggct
    33901 cttaaaacga tagtggctca ggctttcatt tttcagcgtt ccccagaaga tttccatcgg
    33961 agcgttgtcg taacagttac ctttacgcga cattgatgtt ttcagaccag actgctcctg
    34021 tatgacccgg taatcgtatg cgcagtactg tgaacctcga tcggtgtggt ggattagccc
    34081 ggcaggtggg cgctggctcc tgagcgccat aaacagggct ttacccgtca attct
//
LOCUS       DADMJE010000026        33958 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.026, whole genome shotgun sequence.
ACCESSION   DADMJE010000026 DADMJE010000000
VERSION     DADMJE010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33958)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33958)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33958
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.026"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..110)
                     /locus_tag="JN001_001121"
     CDS             complement(<1..110)
                     /locus_tag="JN001_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY9052424.1"
                     /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACS"
     gene            complement(270..482)
                     /gene="rpmE"
                     /locus_tag="JN001_001122"
     CDS             complement(270..482)
                     /gene="rpmE"
                     /locus_tag="JN001_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HAY9052425.1"
                     /translation="MKKDIHPKYEEITASCSCGNVMKIRSTVGHDLNLDVCSKCHPFF
                     TGKQRDVATGGRVDRFNKRFNIPGSK"
     gene            685..2883
                     /gene="priA"
                     /locus_tag="JN001_001123"
     CDS             685..2883
                     /gene="priA"
                     /locus_tag="JN001_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HAY9052426.1"
                     /translation="MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIG
                     VVVSVSDVSELPLNELKAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPI
                     LLRQGRPAANAPMWYWFATEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEF
                     NDAALQALRKKGLCDLASETPEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFS
                     AWLLAGVTGSGKTEVYLSVLENVLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVL
                     HSGLNDSERLSAWLKAKNGEAAIVIGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWR
                     YHARDLAVYRAHSEQIPIILGSATPALETLCNVQQKKYRLLRLTRRAGNACPAIQHVL
                     DLKGQKVQAGLAPALITRMRQHLQANNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
                     YYTLHQAQQHLRCHHCDSQRPVPRQCPSCGSTHLVPVGLGTEQLEQTLAPMFPGVPIS
                     RIDRDTTSRKGALEQQLAEVHRGGARILIGTQMLAKGHHFPDVTLVALLDVDGALFSA
                     DFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHHPEHPLLQTLLYKGYDAFAEQALAE
                     RRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLILSSPLADDKLWILGPVPALAPK
                     RGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRKVKWVLDVDPIEG"
     gene            3039..4064
                     /gene="cytR"
                     /locus_tag="JN001_001124"
     CDS             3039..4064
                     /gene="cytR"
                     /locus_tag="JN001_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CytR"
                     /protein_id="HAY9052427.1"
                     /translation="MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRV
                     EKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDPFFSEIIRGIEVTAANHGYLVLI
                     GDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
                     LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVD
                     PQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLS
                     IIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHVGSGSRLMDCELIIR
                     GSTRALP"
     gene            4156..5115
                     /gene="ftsN"
                     /locus_tag="JN001_001125"
     CDS             4156..5115
                     /gene="ftsN"
                     /locus_tag="JN001_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsN"
                     /protein_id="HAY9052428.1"
                     /translation="MAQRDYVRRSQPAPSRRKKSTSRKKQRNLPAVSPAMVAIAAAVL
                     VTFIGGLYFITHHKKEESETLQSQKVTGNGLPPKPEERWRYIKELESRQPGVRAPTEP
                     SAGGEVKTPEQLTPEQRQLLEQMQADMRQQPTQLVEVPWNEQTPEQRQQTLQRQRQAQ
                     QLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKPASTQQPYQDLLQTPAHTT
                     AQSKPQQAAPVARAADAPKPTAEKKDERRWMVQCGSFRGAEQAETVRAQLAFEGFDSK
                     ITTNNGWNRVVIGPVKGKENADSTLNRLKMAGHTNCIRLAAGG"
     gene            5208..5738
                     /gene="hslV"
                     /locus_tag="JN001_001126"
     CDS             5208..5738
                     /gene="hslV"
                     /locus_tag="JN001_001126"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008457544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HAY9052429.1"
                     /translation="MTTIVSVRRNGHVVIAGDGQATLGNTVMKGNVKKVRRLYNDKVI
                     AGFAGGTADAFTLFELFERKLEMHQGHLVKAAVELAKDWRTDRMLRKLEALLAVADET
                     ASLIITGNGDVVQPENDLIAIGSGGPYAQAAARALLENTELSAREIAEKALDIAGDIC
                     IYTNHFHTIEELSYKA"
     gene            5748..7079
                     /gene="hslU"
                     /locus_tag="JN001_001127"
     CDS             5748..7079
                     /gene="hslU"
                     /locus_tag="JN001_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019841241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HslU--HslV peptidase ATPase subunit"
                     /protein_id="HAY9052430.1"
                     /translation="MSEMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEEL
                     RHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRD
                     LTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFR
                     KKLREGQLDDKEIEIDLAAAPMGVEIMAPPGMEEMTSQLQSMFQNLGGQKQKARKLKI
                     KDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREG
                     VQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQA
                     LTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGA
                     RRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL"
     gene            7146..8072
                     /gene="menA"
                     /locus_tag="JN001_001128"
     CDS             7146..8072
                     /gene="menA"
                     /locus_tag="JN001_001128"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HAY9052431.1"
                     /translation="MTEQQISRTQAWLESLRPKTLPLAFAAIIVGTALAWWQGHFDPL
                     VALLALITAGLLQILSNLANDYGDAVKGSDRPDRIGPLRGMQKGVITQQEMKRALIIT
                     VVLICLSGLALVAVACHTLADFVGFLILGGLSIIAAITYTVGNRPYGYIGLGDISVLV
                     FFGWLSVMGSWYLQAHTLIPALILPATACGLLATAVLNINNLRDINSDRENGKNTLVV
                     RLGEVNARRYHACLLMGSLVCLALFNLFSLHSLWGWLFLLAAPLLVKQARYVMREMDP
                     VAMRPMLERTVKGALLTNLLFILGIFLSQWAA"
     gene            8165..8650
                     /gene="rraA"
                     /locus_tag="JN001_001129"
     CDS             8165..8650
                     /gene="rraA"
                     /locus_tag="JN001_001129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001392924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E activity regulator RraA"
                     /protein_id="HAY9052432.1"
                     /translation="MKYDTSELCDIYQEDVNVVEPLFSNFGGRASFGGQIITVKCFED
                     NGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDL
                     EELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI
                     E"
     gene            complement(8735..8980)
                     /gene="zapB"
                     /locus_tag="JN001_001130"
     CDS             complement(8735..8980)
                     /gene="zapB"
                     /locus_tag="JN001_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring assembly protein ZapB"
                     /protein_id="HAY9052433.1"
                     /translation="MTMSLEVFEKLEAKVQQAIDTITLLQMEIEELKEKNNSLSQEVQ
                     NAQHQREELERENNHLKEQQNGWQERLQALLGRMEEV"
     gene            9406..10251
                     /gene="glpF"
                     /locus_tag="JN001_001131"
     CDS             9406..10251
                     /gene="glpF"
                     /locus_tag="JN001_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol uptake facilitator protein GlpF"
                     /protein_id="HAY9052434.1"
                     /translation="MSQTSTLKGQCIAEFLGTGLLIFFGVGCVAALKVAGASFGQWEI
                     SVIWGLGVAMAIYLTAGVSGAHLNPAVTIALWLFACFDKRKVIPFIVSQVAGAFCAAA
                     LVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVITAILM
                     GLILALTDDGNGVPRGPLAPLLIGLLIAVIGASMGPLTGFAMNPARDFGPKVFAWLAG
                     WGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRHLPCDICVVKEKETTTPSE
                     QKASL"
     gene            10274..11782
                     /gene="glpK"
                     /locus_tag="JN001_001132"
     CDS             10274..11782
                     /gene="glpK"
                     /locus_tag="JN001_001132"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HAY9052435.1"
                     /translation="MTEKKYIVALDQGTTSSRAVVMDHDANIISVSQREFEQIYPKPG
                     WVEHDPMEIWATQSSTLVEVLAKADISSDQIAAIGITNQRETTIVWEKETGKPIYNAI
                     VWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEGSRERARRGE
                     LLFGTVDTWLIWKMTQGRVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEV
                     RRSSEVYGQTNIGGKGGTRIPISGIAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNT
                     GEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMKLINDAYDSEYFA
                     TKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDV
                     LEAMQADSGIRLHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGL
                     AVGFWQNLDELQEKAVIEREFRPGIETTERNYRYAGWKKAVKRAMAWEEHDE"
     gene            11917..12927
                     /gene="glpX"
                     /locus_tag="JN001_001133"
     CDS             11917..12927
                     /gene="glpX"
                     /locus_tag="JN001_001133"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HAY9052436.1"
                     /translation="MRRELAIEFSRVTESAALAGYKWLGRGDKNTADGAAVNAMRIML
                     NQVNIDGTIVIGEGEIDEAPMLYIGEKVGTGRGDAVDIAVDPIEGTRMTAMGQANALA
                     VLAVGDKGCFLNAPDMYMEKLIVGPGAKGTIDLNLPLADNLRNVAAVLGKPLSELTVT
                     ILAKPRHDAVIAEMQQLGVRVFAIPDGDVAASILTCMPDSEVDVLYGIGGAPEGVVSA
                     AVIRALDGDMNGRLLARHDVKGDNEENRRIGEQELARCKAMGIEAGKVLRLGDMARSD
                     NVIFSATGITKGDLLEGISRKGNIATTETLLIRGKSRTIRRIQSIHYLDRKDPEMQVH
                     IL"
     gene            13024..13770
                     /gene="fpr"
                     /locus_tag="JN001_001134"
     CDS             13024..13770
                     /gene="fpr"
                     /locus_tag="JN001_001134"
                     /EC_number="1.18.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001742479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin--NADP(+) reductase"
                     /protein_id="HAY9052437.1"
                     /translation="MADWVTGKVTKVQNWTDALFSLTVHAPVLPFTAGQFTKLGLEID
                     GERVQRAYSYVNSPDNPDLEFYLVTVPDGKLSPRLAALKPGDEVQVVSEAAGFFVLDE
                     VPDCETLWMLATGTAIGPYLSILQLGKDLDRFKNLVLVHAARYAADLSYLPLMQELEK
                     RYEGKLRIQTVVSRETAAGSLTGRIPALIESGELESAIGLPMNKETSHVMLCGNPQMV
                     RDTQQLLKETRQMTKHLRRRPGHMTAEHYW"
     gene            complement(13775..14203)
                     /gene="uspD"
                     /locus_tag="JN001_001135"
     CDS             complement(13775..14203)
                     /gene="uspD"
                     /locus_tag="JN001_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspD"
                     /protein_id="HAY9052438.1"
                     /translation="MAYKHIGVAISGNEEDALLVNKALELARHNDAHLTLIHIDDGLS
                     ELYPGIYFPATEDILQLLKNKSDNKLYKLTKNIQWPKTKLRIERGEMPETLLEIMQKE
                     QCDLLVCGHHHSFINRLMPAYRGMINKMSADLLIVPFIDK"
     gene            complement(14230..14529)
                     /locus_tag="JN001_001136"
     CDS             complement(14230..14529)
                     /locus_tag="JN001_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 domain-containing protein"
                     /protein_id="HAY9052439.1"
                     /translation="MKDVVDKCSTKGCAIDIGTVIDNDNCTSKFSRFFATREEAESFM
                     TKLKELAAAASSADEGASVAYKIKDLEGQVELDAAFTFSCQAEMIIFELSLRSLA"
     gene            complement(14741..15181)
                     /locus_tag="JN001_001137"
     CDS             complement(14741..15181)
                     /locus_tag="JN001_001137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY9052440.1"
                     /translation="MTIQQWLFSFKGRIGRRDFWIWIGLWFAGMLVLFSLAGKNLLDI
                     QTAAFCLVCLLWPTAAVTVKRLHDRGRSGAWAFLMIVAWMLLAGNWAILPGVWQWAVG
                     CFVPTLILVMMLIDLGAFVGTQGENKYGKDTQDVKYKADNKSSN"
     gene            15282..15881
                     /locus_tag="JN001_001138"
     CDS             15282..15881
                     /locus_tag="JN001_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiQ family protein"
                     /protein_id="HAY9052441.1"
                     /translation="MKPGCTLFFLLCSALTVTTTAHAQTPDTATTAPYLLAGAPTFDL
                     SISQFREDFNSQNPSLPLNEFRAIDSSPDKANLTRAASKINENLYASTALERGTLKIK
                     SIQMTWLPIQGPEQKAAKAKAQEYMAAVIRTLTPLMTKTQSQKKLQSLLTAGKNKRYY
                     TETEGALRYVVADNGEKGLTFAVEPIKLALSESLEGLNK"
     gene            15989..16756
                     /gene="tpiA"
                     /locus_tag="JN001_001139"
     CDS             15989..16756
                     /gene="tpiA"
                     /locus_tag="JN001_001139"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HAY9052442.1"
                     /translation="MRHPLVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPE
                     MYIDMAKREAEGSHIMLGAQNVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYH
                     KESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFE
                     GAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHIAKVDANIAEQVIIQYGGSVNASNA
                     AELFAQPDIDGALVGGASLKADAFAVIVKAAEAAKQA"
     gene            complement(16811..17566)
                     /gene="cdh"
                     /locus_tag="JN001_001140"
     CDS             complement(16811..17566)
                     /gene="cdh"
                     /locus_tag="JN001_001140"
                     /EC_number="3.6.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol diphosphatase"
                     /protein_id="HAY9052443.1"
                     /translation="MKKAGLLFLVMIVIAVVAAGIGYWKLTGEESDTLRKIVLEECLP
                     NQQQNQNPSPCAEVKPNAGYVVLKDLNGPLQYLLMPTYRINGTESPLLTDPSTPNFFW
                     LAWQARDFMSKKYGQPVPDRAVSLAINSRTGRTQNHFHIHISCIRPDVREQLDNNLAN
                     ISSRWLPLPGGLRGHEYLARRVTESELVQRSPFMMLAEEVPEAREHMGSYGLAMVRQS
                     DNSFVLLATQRNLLTLNRASAEEIQDHQCEILR"
     gene            complement(17673..18662)
                     /locus_tag="JN001_001141"
     CDS             complement(17673..18662)
                     /locus_tag="JN001_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9052444.1"
                     /translation="MNKWGVGLTFLLAATSVMAKDIQLLNVSYDPTRELYEQYNKAFS
                     AHWKQQTGDNVVMRQSHGGSGKQATSVINGIEADVVTLALAYDVDAIAERGRIDKEWI
                     KRLPDNSAPYTSTIVFLVRKGNPKQIHDWNDLIKPGVSVITPNPKSSGGARWNYLAAW
                     GYALHHNNNDQAKAQDFVRALYKNVEVLDSGARGSTNTFVERGIGDVLIAWENEALLA
                     ANELGKDKFEIVTPSESILAEPTVSVVDKVVEKKGTKEVAEAYLKYLYSPEGQEIAAK
                     NYYRPRDAEVAKKYENAFPKLKLFTIDEEFGGWTKAQKEHFANGGTFDQISKR"
     gene            complement(18982..19944)
                     /gene="pfkA"
                     /locus_tag="JN001_001142"
     CDS             complement(18982..19944)
                     /gene="pfkA"
                     /locus_tag="JN001_001142"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HAY9052445.1"
                     /translation="MIKKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLG
                     LYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENIRAVAIENLKKRGIDALVVIG
                     GDGSYMGSMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
                     HQRISVVEVMGRYCGDLTLAAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAI
                     VAITEHMCDVDELAHFIEKETGRETRATVLGHIQRGGSPVPYDRILASRMGAYAIDLL
                     LAGYGGRCVGIQNEQLVHHDIIDAIENMKRPFKGDWLDCAKKLY"
     gene            complement(20125..21027)
                     /gene="fieF"
                     /locus_tag="JN001_001143"
     CDS             complement(20125..21027)
                     /gene="fieF"
                     /locus_tag="JN001_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312867.1"
                     /note="FieF, a metal efflux transporter, is a member of
                     the CDF (cation diffusion facilitator) family of
                     transporters; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family cation-efflux transporter FieF"
                     /protein_id="HAY9052446.1"
                     /translation="MNQSYGRLVSRAAIAATAMASLLLLIKIFAWWYTGSVSILAALV
                     DSLVDIGASLTNLLVVRYSLQPADDNHSFGHGKAESLAALAQSMFISGSALFLFLTGI
                     QHLISPTPMIDPGVGVIVTIVALICTIILVSFQRWVVRRTQSQAVRADMLHYQSDVMM
                     NGAILLALGLSWYGWHRADALFALGIGIYILYSALRMGYEAVQSLLDRALPDEERQEI
                     IDIVTSWPGVSGAHDLRTRQSGPTRFIQIHLEMEDSLPLVQAHMVADQVEQAILRRFP
                     GSDVIIHQDPCSVVPREGKRSMLS"
     gene            complement(21175..21711)
                     /gene="cpxP"
                     /locus_tag="JN001_001144"
     CDS             complement(21175..21711)
                     /gene="cpxP"
                     /locus_tag="JN001_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell-envelope stress modulator CpxP"
                     /protein_id="HAY9052447.1"
                     /translation="MRIVTAAVMASTLAVSSLSHAAEVGSGDNWHPGEELTQRSTQRS
                     TQRSTQRSTQSHMFDGISLTEHQRQQMRDLMQQARHEQPPVNVSELETMHRLVTAENF
                     DENAVRAQAEKMANEQIARQVEMAKVRNQMYRLLTPEQQAVLNEKHQQRMEQLRDVTQ
                     WQKSSSLKLLSSSNSRSQ"
     gene            21861..22559
                     /gene="cpxR"
                     /locus_tag="JN001_001145"
     CDS             21861..22559
                     /gene="cpxR"
                     /locus_tag="JN001_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response regulator transcription
                     factor CpxR"
                     /protein_id="HAY9052448.1"
                     /translation="MNKILLVDDDRELTSLLKELLEMEGFNVIVAHDGEQALDLLDDS
                     IDLLLLDVMMPKKNGIDTLKALRQTHQTPVIMLTARGSELDRVLGLELGADDYLPKPF
                     NDRELVARIRAILRRSHWSEQQQNNDNGSPTLEVDALVLNPGRQEASFDGQTLELTGT
                     EFTLLYLLAQHLGQVVSREHLSQEVLGKRLTPFDRAIDMHISNLRRKLPDRKDGHPWF
                     KTLRGRGYLMVSAS"
     gene            22556..23929
                     /gene="cpxA"
                     /locus_tag="JN001_001146"
     CDS             22556..23929
                     /gene="cpxA"
                     /locus_tag="JN001_001146"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress sensor histidine kinase CpxA"
                     /protein_id="HAY9052449.1"
                     /translation="MIGSLTARIFAIFWLTLALVLMLVLMLPKLDSRQMTELLDSEQR
                     QGLMIEQHVEAELANDPPNDLMWWRRLFRAIDKWAPPGQRLLLVTTEGRVIGAERSEM
                     QIIRNFIGQADNADHPQKKKYGRVELVGPFSVRDGEDNYQLYLIRPASSSQSDFINLL
                     FDRPLLLLIVTMLVSTPLLLWLAWSLAKPARKLKNAADEVAQGNLRQHPELEAGPQEF
                     LAAGASFNQMVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGESKELER
                     IETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTV
                     NFPPGPWPLYGNPNALESALENIVRNALRYSHTKIEVGFAVDKDGITITVDDDGPGVS
                     PEDREQIFRPFYRTDEARDRESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIW
                     LPLYKRS"
     gene            complement(24035..24709)
                     /gene="yiiM"
                     /locus_tag="JN001_001147"
     CDS             complement(24035..24709)
                     /gene="yiiM"
                     /locus_tag="JN001_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418346.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-N-hydroxylaminopurine resistance protein"
                     /protein_id="HAY9052450.1"
                     /translation="MRYPVDVYTGKIQAYPEGKPSAIAKIQVDGELMLTELGLEGDEQ
                     AEKKVHGGPDRALCHYPREHYLYWAREFPEQAELFVAPAFGENLSTDGLTESNVYMGD
                     IFRWGEALIQVSQPRSPCYKLNYHFDISDIAQLMQNTGKVGWLYSVIAPGKVSADAPL
                     ELVSRVSDVTVQEAAAIAWHMPFDDDQYHRLLSAAGLSKSWTRTMQKRRLSGKIEDFS
                     RRLWGK"
     gene            complement(24858..25823)
                     /gene="kdgT"
                     /locus_tag="JN001_001148"
     CDS             complement(24858..25823)
                     /gene="kdgT"
                     /locus_tag="JN001_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxygluconate transporter"
                     /protein_id="HAY9052451.1"
                     /translation="MRKSRGGMMLVPLFLGALCHTFSPGAGKYFGSFTNGMITGTVSI
                     LAVWFFCMGASIKLSATGTVLRKSGTLVVTKIAVAWVVAAIASRIIPEHGVEVGFFAG
                     LSTLALVAAMDMTNGGLYASIMQQYGTKEEAGAFVLMSLESGPLMTMIILGTAGIASF
                     EPHVFVGAVLPFLVGFALGNLDPELREFFSKAVQTLIPFFAFALGNTIDLTVIAQTGL
                     LGILLGVAVIIVTGIPLIIADKLIGGGDGTAGIAASSSAGAAVATPMLIAEMVPAFKP
                     MAPAATSLVATAVIVTSILVPILTSIWSRKVKARAAKIEILGTVK"
     gene            complement(26102..26722)
                     /gene="sodA"
                     /locus_tag="JN001_001149"
     CDS             complement(26102..26722)
                     /gene="sodA"
                     /locus_tag="JN001_001149"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010345169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Mn]"
                     /protein_id="HAY9052452.1"
                     /translation="MSYTLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALE
                     SLPEFANLPVEELITKLDQLPADKKTVLRNNAGGHANHSLFWKGLKKGTTLQGDLKAA
                     IERDFGSVDNFKAEFEKAAASRFGSGWAWLVLKGDKLAVVSTANQDSPLMGEAISGAS
                     GFPILGLDVWEHAYYLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK"
     gene            27006..28040
                     /gene="rhaT"
                     /locus_tag="JN001_001150"
     CDS             27006..28040
                     /gene="rhaT"
                     /locus_tag="JN001_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose/proton symporter RhaT"
                     /protein_id="HAY9052453.1"
                     /translation="MSNAITMGIFWHLIGAASAACFYAPFKKVKKWSWETMWSVGGIV
                     SWIILPWAISALLLPNFWAYYSSFSLSTLLPVFLFGAMWGIGNINYGLTMRYLGMSMG
                     IGIAIGITLIVGTLMTPIINGNFDVLLNTEGGRMTLLGVLVALIGVGIVTRAGQLKER
                     KMGIKAEEFNLKKGLVLAVMCGIFSAGMSFAMNAAKPMHEAAAALGVDPLYVALPSYV
                     IIMGGGAIINLGFCFIRLAKVKDLSLKADFSLAKPLIIHNVLLSALGGLMWYLQFFFY
                     AWGHARIPAQYDYISWMLHMSFYVLCGGIVGLVLKEWNNAGRRPVTVLSLGCVVIIVA
                     ANIVGIGMAN"
     gene            complement(28037..28975)
                     /gene="rhaR"
                     /locus_tag="JN001_001151"
     CDS             complement(28037..28975)
                     /gene="rhaR"
                     /locus_tag="JN001_001151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709710.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaR"
                     /protein_id="HAY9052454.1"
                     /translation="MAFCNNANLLNVFVRHIANNQLRSLAEVATVAHQLKLLKDDFFA
                     SDQQAVAVADRYPQDVFAEHTHDFCELVIVWRGNGLHVLNDRPYRITRGDLFYIHADD
                     KHSYASVNDLVLQNIIYCPERLKLNLDWQGAIPGFSASAGQPHWRLGSVGMAQARQVI
                     GQLEHESSQHVSFANEMAELLFGQLVMLLNRHRYTSDSLPPTSSETLLDKLITRLAAS
                     LKSPFALDKFCDEASCSERVLRQQFRQQTGMTINQYLRQVRVCHAQYLLQHSRLLISD
                     ISTECGFEDSNYFSVVFTRETGMTPSQWRHLNSQKD"
     gene            complement(28959..29795)
                     /gene="rhaS"
                     /locus_tag="JN001_001152"
     CDS             complement(28959..29795)
                     /gene="rhaS"
                     /locus_tag="JN001_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator RhaS"
                     /protein_id="HAY9052455.1"
                     /translation="MTVLHSVDFFPSGNASVAIEPRLPQADFPEHHHDFHEIVIVEHG
                     TGIHVFNGQPYTITGGTVCFVRDHDRHLYEHTDNLCLTNVLYRSPDRFQFLAGLNQLL
                     PQELDGQYPSHWRVNHSVLQQVRQLVAQMEQQEGENDLPSTASREILFMQLLLLLRKS
                     SLQENLENSASRLNLLLAWLEDHFADEVNWDAVADQFSLSLRTLHRQLKQQTGLTPQR
                     YLNRLRLMKARHLLRHSEASVTDIAYRCGFSDSNHFSTLFRREFNWSPRDIRQGRDGF
                     LQ"
     gene            30083..31495
                     /gene="rhaB"
                     /locus_tag="JN001_001153"
     CDS             30083..31495
                     /gene="rhaB"
                     /locus_tag="JN001_001153"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HAY9052456.1"
                     /translation="MTFRNCVAVDLGASSGRVMLARYERECRSLTLREIHRFNNGLHS
                     QNGYVTWNVDSLESAIRLGLNKVCEEGIRIDSIGIDTWGVDFVLLDQQGQRVGLPVAY
                     RDSRSNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPELIPHIAHALLM
                     PDYFSYRLTGKMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIG
                     HWICPQGNEIPVVAVASHDTASAVIASPLNGSRAAYLSSGTWSLMGFESQTPFTNDTA
                     LAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPALIAATQALPACRFIINP
                     NDDRFINPEAMCSEIQAACRETAQPIPESDAELAQLRGEDFSQLHIVGGGCQNTLLNQ
                     LCADACGIRVIAGPVEASTLGNIGIQLMTLDELNNVDDFRQVVSTTANLTTFTPNPDS
                     EIAHYVAQLHSTRQTKELCA"
     gene            31492..32751
                     /gene="rhaA"
                     /locus_tag="JN001_001154"
     CDS             31492..32751
                     /gene="rhaA"
                     /locus_tag="JN001_001154"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HAY9052457.1"
                     /translation="MTTQLEQAWELAKQRFAAVGIDVEEALRQLDRLPVSMHCWQGDD
                     VSGFENPEGSLTGGIQATGNYPGKARNASELRADLEQAMRLIPGPKRLNFHAIYLESD
                     TPVSRDQIKPEHFKNWGEWAKANQLGLDFNPSCFSHPLSADGFTLSHPDDSIRQFWID
                     HCKASRRVSAYFGEQLGTPSVMNIWIPDGMKDITVDRLAPRQRLLAALDEVISKKLNP
                     AHHIDAVESKLFGIGAESYTVGSNEFYMGYATSRQTALCLDAGHFHPTEVISDKISAA
                     MLYVPQLLLHVSRPVRWDCDHVVLLDDETQAIASEIVRHDLFDRVHIGLDFFDASINR
                     IAAWVIGTRNMKKALLRALLEPTAELRKLEAAGDYTARLALLEEQKSLPWQAVWEMYC
                     QRHDTPAGSEWLESVRAYEKEILSQRG"
     gene            32834..33658
                     /gene="rhaD"
                     /locus_tag="JN001_001155"
     CDS             32834..33658
                     /gene="rhaD"
                     /locus_tag="JN001_001155"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HAY9052458.1"
                     /translation="MQNITQSWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAP
                     YKDNVHAQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDPAANLGVVKVDSDGAGY
                     HILWGLTNEAVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLENDTAV
                     FTRQLWEGSTECLVVFPDGVGILPWMVPGTDEIGQATAQEMQKHSLVLWPFHGVFGSG
                     STLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGKRFGVTPLASALAL"
     gene            33668..>33958
                     /gene="rhaM"
                     /locus_tag="JN001_001156"
     CDS             33668..>33958
                     /gene="rhaM"
                     /locus_tag="JN001_001156"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HAY9052459.1"
                     /translation="MIRKAFVMQVNPDAHEEYQRRHNPIWPELEAVLKSHGAHNYAIY
                     LDKARNLLFATVEIESEERWNAVASTDVCQRWWKYMTDVMPANPDNSPVSSEL"
BASE COUNT         8326 a         8854 c         8803 g         7975 t
ORIGIN      
        1 gaacaggcca cgccggtggg agcaccaatg cgcaccccgg ctgaaccctg aacaatgcta
       61 ccgccatact gcgtcatgtc gccctgacgc gccgccggtt ttccgctcat cgtaaaatcc
      121 ttttgaaata aataagaacc agaagcctag cgccagtcaa caacaggaaa tgataatgag
      181 ttaacacccc ggaatttttc agaatttata aaaggcaaaa ttcaggcaca aaaaaagcgc
      241 cgtgcggcgc ttttttcgga aatccggtct tatttgctgc ccgggatgtt gaaacgcttg
      301 ttgaagcggt caacacggcc accggtagca acatcacgct gtttgccagt gaagaacggg
      361 tggcacttgc tgcacacgtc gaggttcagg tcatgaccaa cagtggagcg gattttcatt
      421 acgttaccgc aagagcagct agcagtaatt tcttcgtatt tcgggtgaat atcttttttc
      481 atgggaaaac ctcggtttaa ggccgcgtcg ctcttccagc cctaacgcca gacaccacgc
      541 gatgttaaaa gtatagcttc aatacgatca tttcgtacga aggcgcgaaa tcatacagaa
      601 attaaccagc gtatgcaaac tgatccgcac tcttctacgg caatgtgtat actaacccac
      661 cgaatttcaa gtcaggatga tgctatgccc gttgcccacg ttgccttgcc cgttccgctt
      721 cctcgtacct ttgactattt gctgccagaa ggcatgacgg ttaaagccgg gtgtcgcgtg
      781 cgcgtgccgt ttggcaaaca gcaggagcgc atcggggttg tggtgtcagt tagcgatgtc
      841 agtgagctgc cgcttaacga gctgaaagcg gtagtggaag tgctggacgt tgagccggta
      901 tttactcact ccgtctggcg gttactgctc tgggcggcag attactatca tcatccgatt
      961 ggcgatgtgc tgtttcatgc cttgccgatt ttactgcgcc aggggcggcc tgcggcgaac
     1021 gcgccgatgt ggtactggtt tgccactgaa caaggccagg cggtggatct gaacagcctg
     1081 aaacgctccc ccaagcaaca acaggcgctg gcggcgttac ggcaaggcaa aatctggcgc
     1141 gaccaggtcg ccacgctcga atttaatgat gccgcgttgc aggcgctacg caaaaaaggt
     1201 ctgtgtgatt tagcaagtga aacaccagag tttagcgact ggcgaacgaa ctatgccgtt
     1261 tctggtgagc ggttgcgatt gaataccgaa caggccaccg ccgttggcgc aattcatagc
     1321 gcggcagata ctttttctgc ctggctgctg gcgggcgtta ccggttccgg taaaacggag
     1381 gtttatctca gtgtactgga aaacgtgctc gctcagggca aacaggcgct ggtgatggtg
     1441 ccggaaatcg gcctgacacc gcaaactatc gcccgttttc gtgaacgttt taatgccccc
     1501 gtggaagttc tgcattccgg cctgaacgac agcgagcggc tttctgcgtg gttgaaagcg
     1561 aaaaatggcg aggcggcgat tgtgatcggc acccgctccg cgctgtttac gccgtttaaa
     1621 aatctcggcg tgattgtcat tgatgaagag cacgacagct cctacaagca gcaggaaggc
     1681 tggcgctatc atgcccgcga cctggcggtg tatcgtgcgc acagcgagca aatcccgatt
     1741 attcttggct ccgcaacgcc cgcgctggaa acgttatgca acgtccagca gaaaaaatac
     1801 cgcctgctgc gcctgacccg tcgggcaggg aatgcttgtc cggcaattca acatgtgctg
     1861 gatttaaaag gtcagaaggt gcaggcaggt ctggctccgg cgttaatcac ccgtatgcgc
     1921 cagcatttac aggccaacaa tcaggttatc ctctttctta atcgtcgggg ttttgcgcct
     1981 gcgctgctgt gccacgactg cggctggata gccgaatgcc cacgttgcga tcactactac
     2041 acgctgcatc aggcgcaaca gcatttgcgc tgtcaccact gtgacagtca gcgtccggtg
     2101 ccgcgccagt gcccttcctg cggttccacg cacctggtcc ccgtggggct gggcaccgaa
     2161 cagcttgaac agacgcttgc gccgatgttc cccggcgtgc ccatttcacg tatcgaccgc
     2221 gataccacca gccgcaaagg ggcactggaa cagcaactgg cggaagtgca tcgcggcggc
     2281 gcgaggattt tgatcggcac acaaatgctg gcgaaaggtc accactttcc ggatgtgacg
     2341 ctggtggcgt tactggatgt ggacggcgcg ctgttttctg ccgattttcg ctcggcagaa
     2401 cgtttcgccc agctttacac ccaggtcgcc ggtcgtgccg ggcgtgcggg taaacagggc
     2461 gaagtggtgc tgcaaacgca ccatccggaa catcctctgt tgcaaacgtt gctctataaa
     2521 ggctacgacg cctttgccga acaggcgctg gctgagcgac gcatgatgca gctgccgccg
     2581 tggaccagcc atgtgattgt gcgtgcggaa gatcataaca atcagcacgc gccgctgttc
     2641 ctgcaacaac tgcgtaatct gatcctttcc agcccgctgg cagacgacaa actgtggatt
     2701 ctcggcccgg ttccggctct ggcacctaag cgtggtggcc gctggcgctg gcagatcttg
     2761 ttgcagcacc cttcccgcgt gcgcttgcaa cacatcatta gtggtacgct ggcgcttatt
     2821 aatacaatac cggattcccg caaggtgaaa tgggtgttgg atgtcgatcc catcgaaggc
     2881 taatgcgcaa acgttgcgag gcggatcgaa aaattcaata ttcatcacac ttttcatgaa
     2941 aattctgtaa ccgttttcac gcgctatctg ctaaaaatgt tgccgatgtg aagtaaacat
     3001 ggatgtagta cgcctgacgt accaggcgag gagtgagtgt gaaagcgaag aagcaggaaa
     3061 ctgccgcgac catgaaagac gttgccctca aggcaaaagt ctctacagcg actgtctccc
     3121 gagcattaat gaatcccgat aaagtctccc aggccacccg taatcgggtt gaaaaagcgg
     3181 cccgggaagt gggttattta ccgcagccta tggggcgcaa cgtcaagcgt aatgaatccc
     3241 gcaccattct ggtgattgtc ccggatatct gcgatccctt ctttagcgaa attattcgcg
     3301 gtatcgaagt tacggcggca aatcacggat atctggtgct gattggcgac tgtgcgcatc
     3361 aaaatcagca ggaaaaaacc tttatcgatt tgatcatcac caagcaaatt gatggcatgt
     3421 tgctgctggg ttcaaggctg ccgtttgatg ccagcattga ggaacagcgt aatctgccgc
     3481 cgatggtgat ggcgaacgaa tttgcaccgg aactggagct gcctaccgtt catatcgaca
     3541 atctgaccgc cgcatttgat gcagtaaatt atttatatga gcaagggcat aaacggattg
     3601 gctgtatagc cggtcccgaa gagatgccac tgtgtcacta ccgcctgcaa ggctatgttc
     3661 aggcgctgcg tcgctgcgga attatggttg atccacaata catcgcccgt ggcgacttca
     3721 ccttcgaagc cggaagcaaa gcaatgcaac agctgcttga tcttccacaa ccgcctactg
     3781 cagtcttctg ccatagcgat gtgatggcgc tcggcgcact ttctcaggca aaacgccagg
     3841 ggctgaaagt cccggaagac ctttccataa tcggttttga taacatcgac ctgacgcaat
     3901 tttgtgatcc gccgctgaca accatcgcgc agccgcgtta cgaaatcggt cgggaagcta
     3961 tgctgttatt gcttgatcaa atgcaggggc aacacgttgg cagtggctct cgtttaatgg
     4021 actgcgaact tatcatccgg ggatcaacac gcgcgttacc ttaaagtaaa cctttaagac
     4081 tgccgtgact ggtcaaaggc ccgccgctta agtaacatgg cgggctgacg aacgaataaa
     4141 tacagcgaaa cgatagtggc acaacgagat tatgtacgcc gcagccaacc ggcaccttcg
     4201 cggcgaaaaa agagcacctc acggaaaaag caacgaaatc tgcctgcggt ttctcccgct
     4261 atggtcgcta ttgctgccgc cgttcttgtg acctttatcg gtggtctgta cttcattacg
     4321 catcacaaga aagaagagtc cgagacgctg caaagccaga aagtgaccgg aaacggacta
     4381 ccaccaaaac cagaagaacg ctggcgctac attaaagagc tggaaagtcg ccagccgggt
     4441 gtgcgtgcgc ccacagaacc ttctgccggt ggtgaagtga aaacgccgga gcaactgaca
     4501 ccagaacaac gtcagcttct tgaacaaatg caggctgata tgcgccagca gccaacgcag
     4561 ctggttgagg ttccgtggaa tgaacagacg ccggaacagc gtcagcaaac gctacaacgc
     4621 cagcgtcagg cgcagcaatt agcggagcag caacgcctgg ctcagcagtc gcgtacgact
     4681 gaacaaagct ggcagcagca gacgcgtacg tcgcaagccg cgccggtaca ggcgcaaccg
     4741 cgccagtcta aaccagcttc tactcagcag ccgtaccagg atctgctgca aacccctgcg
     4801 cacacgaccg cgcagtcgaa gccgcagcaa gctgcaccgg ttgctcgtgc cgctgacgcg
     4861 ccaaaaccga cggcggagaa aaaagacgaa cgccgctgga tggtgcagtg cggttcgttc
     4921 agaggcgcgg aacaggcaga gacggtacgt gctcagctgg cgttcgaagg atttgactcg
     4981 aaaatcacca ccaacaatgg ctggaatcgt gtggtcattg gcccggtgaa aggcaaagag
     5041 aacgcagaca gcaccctcaa tcggttgaag atggcgggtc atacaaactg cattcggctc
     5101 gccgccgggg gttgaaaccc tcaaaatccc ccccatctat aattgcatta tgcctcgtac
     5161 ttttgtacgg ggtttgtact ctgtattcgt aaccaagggg tcagctcgtg acaactatag
     5221 taagcgtacg ccgtaacggc catgtggtca tcgctggtga tggtcaggcc acgttgggca
     5281 ataccgtaat gaaaggcaac gtgaaaaagg tccgccgtct gtacaacgac aaagtcatcg
     5341 cgggctttgc gggcggtact gcggatgctt ttacgctgtt cgaactgttt gaacgtaaac
     5401 tggaaatgca tcagggccat ctggttaaag ccgccgttga gctggcaaaa gactggcgta
     5461 ccgatcgcat gctgcgcaaa cttgaagcac tgctggcagt cgcggatgaa actgcatcgc
     5521 ttatcatcac cggtaacggt gacgtggtgc agccagaaaa cgatcttatt gctatcggct
     5581 ccggcggccc ttacgcccag gctgcggcgc gcgcgctgtt agaaaacact gaacttagcg
     5641 cccgtgaaat tgctgaaaag gcgttggata ttgcaggcga catttgcatc tataccaacc
     5701 atttccacac catcgaagaa ttaagctaca aagcgtaagg atctcccatg tctgaaatga
     5761 ccccacgcga aatcgtcagc gaactggata agcacatcat cggccaggac aacgccaagc
     5821 gttctgtggc gattgctctg cgtaaccgct ggcgtcgcat gcagctcaac gaagagctgc
     5881 gccatgaagt gaccccgaaa aatatcctga tgatcggccc gaccggtgtc ggtaaaactg
     5941 aaatcgcccg tcgtctggct aagctggcga atgcgccgtt catcaaagtt gaagcgacca
     6001 aattcaccga agtgggctat gtcggtaagg aagtggattc tattattcgc gatctgaccg
     6061 atgccgccgt gaaaatggta cgcgtccagg ctatcgagaa aaaccgttat cgcgctgaag
     6121 aactggcaga agaacgtatt ctcgacgtgc tgatcccacc tgctaaaaac aactggggac
     6181 agaccgaaca gcagcaggaa ccgtccgctg ctcgtcaggc attccgcaaa aaactgcgtg
     6241 aaggccagct tgatgacaaa gaaatcgaga tcgatcttgc cgcagcaccg atgggcgttg
     6301 aaattatggc tcctccaggc atggaagaga tgaccagcca gctgcagtcc atgttccaga
     6361 acctgggcgg ccagaagcaa aaagcgcgta agctgaaaat caaagacgcc atgaagctgc
     6421 tgattgaaga agaagcggcg aaactggtga acccggaaga gctgaagcaa gacgctatcg
     6481 acgctgttga gcagcacggg atcgtgttta tcgacgaaat cgacaaaatc tgtaagcgcg
     6541 gcgagtcttc cggtccggat gtttctcgtg aaggcgttca gcgtgacctg ctgccgctgg
     6601 tagaaggttg caccgtttcc accaaacacg ggatggtcaa aactgaccac attctgttta
     6661 tcgcttctgg cgcgttccag attgcgaaac cgtctgacct aatcccggaa ctgcaaggtc
     6721 gtctgccaat ccgcgttgaa ctgcaggcac tgaccaccag cgacttcgag cgtattctga
     6781 ccgagccgaa tgcctctatc accgtgcagt acaaagcact gatggcgact gaaggcgtaa
     6841 atatcgagtt taccgactcc ggtattaaac gcatcgcgga agcggcatgg caggtgaacg
     6901 aatctaccga aaacatcggt gctcgtcgtt tacacactgt tctggagcgt ttaatggaag
     6961 agatttccta cgacgccagc gatttaagcg gtcaaaatat cactattgac gcagattatg
     7021 tgagcaaaca tctggatgcg ttggtggcag atgaagatct gagccgtttt atcctataat
     7081 cgcgttcaat cattttcatc attgtttgat ggggctgaaa ggccccattt ttattggcgc
     7141 gtattatgac tgaacaacaa attagccgaa ctcaggcgtg gctggaaagt ttacgaccta
     7201 aaaccctccc cctcgccttt gctgcaatta tcgtcgggac ggcgctggca tggtggcaag
     7261 gtcattttga tccgctggtc gccctgctgg cactgattac cgccgggcta ttacagatcc
     7321 tttctaacct cgccaatgat tacggcgatg cggtaaaagg cagcgataga cctgaccgca
     7381 ttgggccgct acgcggcatg caaaaagggg tcattaccca gcaagagatg aaacgggcgc
     7441 tcattattac cgtcgtgctc atctgtctct ccgggctggc actggttgca gtggcgtgcc
     7501 atacgctggc tgattttgtc ggtttcctga ttcttggcgg gttgtcgatc attgccgcta
     7561 tcacctacac cgtgggcaat cgtccttatg gttatatcgg tctgggggat atttccgtac
     7621 tggttttctt tggctggtta agcgtcatgg ggagctggta tttacaggct catacattga
     7681 ttccggcact gatccttccg gcgaccgcat gcggcctgct ggcaacggca gtactgaaca
     7741 ttaataacct gcgtgatatc aatagcgacc gagaaaacgg caaaaacacg ctggtggtgc
     7801 gcttaggtga agtgaacgcg cgtcgttatc atgcctgcct gctgatgggc tctctggtat
     7861 gtctggcgct gtttaatctc ttttcgctgc atagcctgtg gggctggctg ttcctgctgg
     7921 cggcaccgtt gctggtgaag caagcccgtt atgtgatgcg ggaaatggac ccggtggcga
     7981 tgcgaccgat gctggaacgc actgtcaagg gggcgttact gactaacctg ctgtttattt
     8041 tagggatatt cctaagccag tgggcagcat aactgacaaa tatcaattaa caattgatga
     8101 ttttgccaac agcccacata gcgcgatata ctgaaaattc tcgcagcaac tgaatgttaa
     8161 gcctatgaaa tacgatactt ccgagctttg tgacatctat caagaagatg ttaacgtcgt
     8221 ggaaccgctg ttctccaact ttggcggacg ggcgtcgttt ggcggacaaa taatcacggt
     8281 aaaatgtttc gaggacaacg ggttgctgta cgatctgctc gaacagaatg gccgtggtcg
     8341 tgttcttgtc gtcgatggcg gtggttctgt tcgtcgcgca ctggtcgatg ctgaactggc
     8401 gcgtctggca gtacaaaatg aatgggaagg tctggttatt tacggcgcgg tgcgtcaggt
     8461 agatgacctg gaagagttgg atatcggcat ccaggcgatg gcggcaattc cggttggtgc
     8521 cgctggcgaa ggcattggcg aaagcgatgt ccgcgtcaat tttggcggtg taaccttctt
     8581 ctccggcgac catctttatg ccgacaatac cgggattatt ctttcagaag atccgctgga
     8641 tattgaatga taagaaaggc accgcaaggt gccttttttc tgcgttacct gttggcctac
     8701 acagtaaaga aattacgcga aagatgaagc gtaatcagac ctcttccatg cgacccagca
     8761 gggcctgcag acgttcctgc cagccgttct gctgttcttt cagatggttg ttctcacgct
     8821 ccagctcttc gcgctgatgc tgggcatttt gaacttcctg cgacagtgag ttgttttttt
     8881 ctttcagctc ttcgatttcc atctgcaaca gagtgatggt atcaatcgcc tgctgtactt
     8941 ttgcttccag tttctcaaac acttctaatg acattgtcat acctctcctg aattgcaagg
     9001 cgttgatgga taaaaaatcc tcgtcccgat taccggtgac gccttaataa atacgagcgc
     9061 actttagtta gctccgattg tatgaagccg cgccatcgct gtccagcggc acgccttgca
     9121 gattacggtt tgccacactt ttcatccttc tcctggtgac ataatccaca tcaatcgaaa
     9181 atgttaataa atttgttgcg cgaatgatct aacaaacatg catcatgtac aatcagatgg
     9241 aataaatggc gcgataacgc tcattttatg acgaagcaca cacattttaa gttcgatatt
     9301 tctcgttttt gctcgttaac gataagttaa cagcatgcct acaagcatcg tggaggtccg
     9361 tgactttcac gcatacaaca aacattaact cttcaggatc cgattatgag tcaaacatca
     9421 accttgaaag gccagtgcat tgctgaattc ctcggtaccg ggttgttgat ttttttcggt
     9481 gtgggttgcg ttgcagcact aaaagtcgct ggtgcgtctt ttggtcagtg ggaaatcagt
     9541 gtcatttggg gactgggggt ggcaatggct atctacctga ccgcaggggt ttccggcgcg
     9601 catcttaatc ccgctgttac cattgcattg tggctgtttg cctgtttcga caagcgcaaa
     9661 gttattcctt ttatcgtttc acaagttgcc ggcgctttct gtgctgcggc tttagtttac
     9721 gggctttact acaatttatt tttcgacttc gagcagactc atcacattgt tcgcggcagc
     9781 gttgaaagtg ttgatctggc aggcactttc tctacttacc ctaatcctca tatcaatttt
     9841 gtgcaggctt tcgcagttga gatggtgatt accgctattc tgatggggct gatcctggcg
     9901 ttaacggacg atggcaacgg tgtaccacgc ggccctttgg ctcccttgct gattggtcta
     9961 ctgattgcgg tcattggcgc atctatgggc ccattgacgg gttttgccat gaacccagcg
    10021 cgtgacttcg gtccgaaagt ctttgcctgg ctggcgggct ggggcaatgt cgcctttacc
    10081 ggcggcagag acattcctta cttcctggtg ccgctttttg gccctatcgt tggcgcgatt
    10141 gtaggtgcat ttgcctaccg caaactgatt ggtcgccatt tgccttgcga tatctgtgtt
    10201 gtgaaagaaa aggaaaccac aactccttca gaacaaaaag cttcgctgta atatgactac
    10261 gggacaatta aacatgactg aaaaaaaata tatcgttgcg ctcgaccagg gcaccaccag
    10321 ctcccgcgcg gtcgtaatgg atcacgatgc caatatcatt agcgtgtcgc agcgcgaatt
    10381 tgagcaaatc tacccaaaac caggttgggt agaacacgac ccaatggaaa tctgggccac
    10441 ccaaagctcc acgctggtag aagtgctggc gaaagccgat atcagttccg atcaaattgc
    10501 agctatcggt attacgaacc agcgtgaaac cactattgtc tgggaaaaag aaaccggcaa
    10561 gcctatctat aacgccattg tctggcagtg ccgtcgtacc gcagaaatct gcgagcattt
    10621 aaaacgtgac ggtttagaag attatatccg cagcaatacc ggtctggtga ttgacccgta
    10681 cttttctggc accaaagtga agtggatcct cgaccatgtg gaaggctctc gcgagcgtgc
    10741 acgtcgtggt gaattgctgt ttggtacggt tgatacgtgg cttatctgga aaatgactca
    10801 gggccgtgtc catgtgaccg attacaccaa cgcctctcgt accatgttgt tcaacatcca
    10861 taccctggac tgggacgaca aaatgctgga agtgctggat attccgcgcg agatgctgcc
    10921 agaagtgcgt cgttcttccg aagtatacgg tcagactaac attggcggca aaggcggcac
    10981 gcgtattcca atctccggga tcgccggtga ccagcaggcc gcgctgtttg gtcagttgtg
    11041 cgtgaaagaa gggatggcga agaacaccta tggcactggc tgctttatgc tgatgaacac
    11101 tggcgagaaa gcggtgaaat cagaaaacgg cctgctgacc accatcgcct gcggcccgac
    11161 tggcgaagtg aactatgcgt tggaaggtgc ggtgtttatg gcaggcgcat ccattcagtg
    11221 gctgcgcgat gagatgaagt tgattaacga cgcctacgat tccgaatatt tcgccaccaa
    11281 agtgcaaaac accaatggtg tgtatgtggt tccggcattt accgggctgg gtgcgccgta
    11341 ctgggacccg tatgcgcgcg gggcgatttt cggtctaact cgtggggtga acgctaacca
    11401 cattatacgc gcgacgctgg agtctattgc ttatcagacg cgtgacgtgc tggaagcgat
    11461 gcaggccgac tctggtatcc gtctgcacgc cctgcgcgtg gatggtggcg cagtagcaaa
    11521 caatttcctg atgcagttcc agtccgatat tctcggcacc cgcgttgagc gcccggaagt
    11581 gcgcgaagtc accgcattgg gtgcggccta tctcgcaggc ctggcggttg gcttctggca
    11641 gaacctcgac gagctgcaag agaaagcggt gattgagcgc gagttccgtc caggcatcga
    11701 aaccactgag cgtaattacc gttacgcagg ctggaaaaaa gcggtcaaac gcgcgatggc
    11761 gtgggaagaa cacgacgagt aatgtaaatg ccggatgaag cgtttatgcc gcatccggta
    11821 gtcctgaaac gtgcgggggc aaccccgcac acatcaataa tcccaccctt cccctgtgct
    11881 acacttcgcg ccattcctta ctgcttagag tttgctatga gacgagaact tgccatcgaa
    11941 ttttcccgcg tcaccgaatc tgcggcgctg gctggctaca aatggttagg acgcggcgat
    12001 aaaaacaccg cggacggcgc ggcggtaaac gccatgcgta ttatgctcaa ccaggtcaac
    12061 attgacggca ccatcgtcat tggtgaaggt gaaatcgacg aagcaccgat gctctacatt
    12121 ggtgaaaaag tcggtactgg tcgcggcgac gcggtagata ttgctgttga tccgattgaa
    12181 ggcacgcgca tgacggcgat gggccaggct aacgcgctgg cggtgctggc agtaggcgat
    12241 aaaggctgct tcctcaatgc gccggatatg tatatggaga agctgattgt cgggccggga
    12301 gccaaaggca ccattgatct gaacctgccg ctggcggata acctgcgcaa tgtagcggcg
    12361 gtgctcggca aaccgttgag cgaactgacg gtaacgattc tagctaaacc acgccacgat
    12421 gccgttatcg ctgaaatgca gcaactcggc gtacgcgtat ttgctattcc ggatggcgac
    12481 gttgcggcct caattctcac ctgtatgcca gacagcgaag ttgacgtgct gtacggtatt
    12541 ggtggcgcgc cggaaggcgt agtttctgcg gcggtgatcc gcgcattaga tggcgacatg
    12601 aacggtcgtc tgctggcgcg tcatgacgtc aaaggcgaca acgaagagaa tcgtcgcatt
    12661 ggcgagcagg agctggcacg ctgcaaagcg atgggcatcg aagccggtaa agtattgcgc
    12721 ctgggcgata tggcgcgcag cgataacgtc atcttctctg ccaccggtat taccaaaggc
    12781 gatctgctgg aaggcattag ccgcaaaggc aatatcgcga ctaccgaaac gctgctgatc
    12841 cgcggcaagt cacgcaccat tcgccgcatt cagtccatcc actatctgga tcgcaaagac
    12901 ccggaaatgc aggtgcacat cctctgattg atttgatcga ttgagccttc cagtccttcg
    12961 ggactggaat ttttttgttc ggagaacgaa gataaggcaa gtcaatcaaa acaggagaaa
    13021 aacatggctg attgggtaac aggcaaagtc actaaagtgc agaactggac cgacgccctg
    13081 tttagtctca ccgttcacgc ccccgtgctt ccgtttaccg ccgggcaatt caccaagctt
    13141 ggccttgaaa tcgacggcga acgcgtccag cgcgcctact cctatgttaa ctcgcccgat
    13201 aatcccgatc tggagtttta cctggtcacc gtccccgatg gcaaattaag cccacgattg
    13261 gcggcactga aaccaggcga tgaagtgcag gtggttagcg aagcagctgg cttctttgtt
    13321 ctggatgaag taccagattg cgaaacgcta tggatgctgg caaccggtac agcgattggc
    13381 ccttatttat cgattctgca actaggcaaa gatttagatc gcttcaaaaa tctggtcctg
    13441 gttcacgccg cacgttatgc cgccgactta agctatttgc cactgatgca agaactggaa
    13501 aaacgctacg aaggcaaact gcgcattcag acggtggtca gtcgggaaac ggcagcgggg
    13561 tcgctcaccg gacggatacc ggcattaatt gaaagtgggg aactggaaag cgcgattggc
    13621 ctgccgatga ataaagaaac cagccatgtg atgctgtgcg gcaatccaca gatggtgcgc
    13681 gatacacaac agttgctgaa agagacccgg cagatgacga aacatttacg tcgccgaccg
    13741 ggccatatga cagcggagca ttactggtaa gcggttactt atcgataaac ggcacgatga
    13801 gcaaatccgc actcatctta ttgatcatcc cgcgatatgc tggcatcaaa cggttgataa
    13861 atgagtgatg atgaccacag acaaggaggt cgcactgctc tttttgcata atttccagca
    13921 gtgtttccgg catttctccg cgttcaatac gcagttttgt cttcggccat tgaatatttt
    13981 tcgtcagttt atacagcttg ttatccgact tattcttcaa caattgaaga atatcttctg
    14041 ttgcagggaa gtagataccc ggatacaact cgcttaagcc atcatcaata tgaattaacg
    14101 tcaggtgagc gtcattatgt ctggcgagct ccagagcttt attcaccagt aaggcatctt
    14161 cttcattccc ggaaattgcc acgccaatgt gtttataagc catgtttaac tccttctaaa
    14221 gcaactccat caagctaacg aacgcagtga taactcaaaa ataatcatct cggcctggca
    14281 tgagaaagtg aaggccgcat caagctcaac ttgcccctcc agatccttaa tcttgtaggc
    14341 cacgctggcc ccttcatctg cagaggatgc agcggcggca agctctttca gtttggtcat
    14401 aaaagactct gcttcttcgc gggtggcaaa aaagcgcgaa aacttactgg tacagttgtc
    14461 gttatcaatc accgtaccga tatcaatcgc acatccttta gtactgcatt tatctacgac
    14521 atctttcata gggcacctct gtatattcgc ctctctgtcg attacgactt aagaataatg
    14581 cgccgttaag ggaagaacaa acaagtaatg atcttatgga ttaccatttt ttttgatatt
    14641 gcttaaggtg aagagttcag aaggattttc cgggtattgt catttgcatc gtggaaataa
    14701 caatcccgga aaaaaatagc agtaagagat atattaaagg ttaattactt gatttattgt
    14761 cggctttata cttcacatcc tgagtatctt taccatattt attttcgcct tgtgtgccaa
    14821 caaacgcacc aagatcgata agcatcatca ccagaatcaa cgtcgggaca aaacacccca
    14881 ccgcccattg ccagacaccc ggtaaaatcg cccagttacc cgccagcagc atccacgcca
    14941 caatcatcag aaatgcccat gcgccggaac gcccgcgatc atgcaagcgc ttaacagtta
    15001 ctgccgctgt tggccaaagc aagcacacaa ggcaaaacgc cgcggtctga atatcgagta
    15061 aatttttacc cgccagtgag aaaagcacca gcatgcctgc gaaccacagg cctatccaaa
    15121 tccagaaatc acggcgtcca atacgccctt taaatgagaa taaccattgc tgtatggtca
    15181 tgtaagttcc ttgatggttg tcttttccag gattctaccc ttttgacaag ggcgacagat
    15241 atcgttttaa tcggagccag tcataacaaa aggtactgtc aatgaagcca gggtgtacgc
    15301 tgttttttct cttatgttct gcattaaccg ttacaacaac ggcgcatgca caaacaccag
    15361 atacggcaac gaccgcgcct tatctgctgg ctggagcccc tactttcgat ctctccatca
    15421 gccagtttcg agaagacttt aacagccaga atcctagcct gccactgaac gaatttcgtg
    15481 ccatcgacag cagtcccgac aaagccaatc tcactcgtgc tgcaagtaaa attaacgaga
    15541 acttgtatgc ttctacagcg ctggagcgcg gtaccttaaa aatcaaaagc attcaaatga
    15601 cctggctacc catccagggg ccagagcaaa aagcagcgaa agcgaaagct caggaataca
    15661 tggcagcagt gatccgcaca ctcaccccat taatgaccaa aacacaaagc cagaaaaaac
    15721 tgcagtcgct gctaacggcg gggaaaaaca aacgttatta caccgagaca gaaggtgcac
    15781 tgcgttatgt tgtcgcggac aacggcgaaa aggggctgac cttcgctgtt gaaccgatta
    15841 agctggcgct atctgaatcg cttgaaggtt tgaataaatg acaaaaagca aagcctttgt
    15901 gccgatgaat ctctatactg tttcacagac ctgctgccct gcggggcggc catcttcctt
    15961 tattcgctta taagcgtgga gaattaaaat gcgacatcct ttagtgatgg gtaactggaa
    16021 actgaacggc agccgccaca tggttcacga gctggtttct aacctgcgta aagagctggc
    16081 aggtgttgct ggctgtgcgg ttgcaatcgc accaccggaa atgtacatcg atatggcgaa
    16141 gcgcgaagct gaaggcagcc acatcatgct gggtgcgcaa aacgtggacc tgaacctgtc
    16201 cggcgcattc accggtgaaa cctctgctgc tatgctgaaa gacatcggcg cacagtacat
    16261 catcatcggc cactctgaac gtcgtactta ccacaaagag tctgacgaac tgatcgcgaa
    16321 aaaattcgcg gtgctgaaag agcagggtct gactccggtt ctgtgcatcg gtgaaaccga
    16381 agctgaaaac gaagcgggca aaactgaaga agtttgcgca cgtcagatcg acgcggtact
    16441 gaaaactcag ggtgctgcgg cattcgaagg tgcggttatc gcttacgaac ctgtatgggc
    16501 aatcggtact ggcaaatctg caactccggc tcaggcacag gctgttcaca aattcatccg
    16561 tgaccacatc gctaaagttg acgctaacat cgctgaacaa gtgatcattc agtacggcgg
    16621 ctctgtaaac gcgtctaacg ctgcagaact gtttgctcag ccagacatcg acggcgcgct
    16681 ggttggcggt gcgtctctga aagctgacgc tttcgcagta atcgttaaag ctgcagaagc
    16741 ggctaaacag gcttaagtct gacaggtgcc ggatttcata tccggcactt actttcctta
    16801 actcttcgcc ttaacgcaaa atctcacact gatgatcctg aatttcctcg gctgaagcac
    16861 ggttaagcgt cagtagattt cgttgtgtcg ccagcaatac aaatgagtta tcactctgcc
    16921 gtaccatcgc cagcccgtag cttcccatat gttcccgcgc ctcaggtact tcttctgcca
    16981 gcatcataaa tgggctgcgt tgtaccagtt cgctttccgt tacccgacgc gccaggtatt
    17041 catgcccgcg caaaccacct ggcagtggca accagcggct gctgatgttc gccagattgt
    17101 tatccagttg ttcgcgcaca tcaggacgaa tacaagagat atgaatatga aaatggtttt
    17161 gcgtacgccc ggtgcgggag ttgatcgcca aagaaaccgc gcgatcggga accggctggc
    17221 cgtacttttt gctcataaaa tcacgcgcct gccaggccaa ccaaaagaag ttcggcgttg
    17281 aaggatcggt caacaaagga ctttcagtac cgttaatacg atacgttggc atcaacagat
    17341 attgcagtgg gccattaaga tcttttaaaa ccacgtatcc ggcattgggt ttgacttccg
    17401 cacatggcga aggattttga ttttgctgct gattgggcaa acattcctca aggacaatct
    17461 tacgtaatgt atccgactct tcaccggtta atttccagta accaataccg gcagccacaa
    17521 cggcgataac tatcatcacc aaaaaaagaa gacccgcttt tttcatcttt ttttccctgt
    17581 acctcaaaga gatgcaaggg taacgcaaaa tcgtgacaaa taaaaaaccc ggtcgcgaga
    17641 aaccaccggg tttgataatt atcctgggga aatcagcgtt tgctgatctg atcgaacgta
    17701 ccgccgttag caaaatgctc tttttgcgct ttcgtccagc cgccgaactc ttcatcaatg
    17761 gtgaataact tcagctttgg aaacgcattt tcgtactttt tcgctacttc agcgtcgcgc
    17821 ggacggtagt agtttttcgc ggcaatttcc tgaccttctg gcgagtagag atatttcagg
    17881 taggcttccg ccacctcttt ggtgcctttt ttctcgacca ctttatcgac caccgacacg
    17941 gttggctctg cgaggataga ctcactcggc gtgacgattt cgaatttatc tttccccagt
    18001 tcattcgctg ccagcagagc ttcgttttcc caggcgatca gtacatcgcc aatcccgcgc
    18061 tcgacaaagg tgttagtgga gccgcgcgcg ccagaatcca gaacttcgac gtttttatac
    18121 agtgcccgaa caaaatcctg tgcttttgcc tgatcgttgt tgttgtgatg cagcgcgtag
    18181 ccccaggcag ccaggtagtt ccagcgtgcg ccaccagagc ttttcggatt aggcgtgatc
    18241 accgaaacac ccggtttaat cagatcgttc cagtcatgga tctgcttcgg attgccctta
    18301 cgcaccagga aaacaatggt ggaagtgtac ggtgcggagt tatccggcag acgtttgatc
    18361 cactctttat caatccgccc gcgttccgca attgcgtcca cgtcataggc cagagccagc
    18421 gtgacaacat cagcttcaat accgttgatt accgacgtcg cttgtttacc tgaaccaccg
    18481 tgtgactgac gcatcaccac gttatcacca gtttgctgtt tccagtgggc gctgaatgcc
    18541 ttgttgtact gttcgtacaa ttcgcgcgtt ggatcatatg aaacgttaag aagctgaata
    18601 tcctttgcca taacgctggt tgccgccagc aaaaatgtta accctacgcc ccacttgttc
    18661 atcgcccgac tctcttatgt tgtgttgtga tgagcaaagc gtgccagaag gttaaccaaa
    18721 cattaaagaa taaaaaaaga ttggctataa cttgcgggta tatgttgagg gattaaaaag
    18781 gcggaagaaa tccgcctcat attgctgaca aagtgcgctt tgtccatgcc ggatgcggcg
    18841 cgaacgcctt atccggccta caaaagtttg caaattcaat aaattgcaga attcatgtag
    18901 gcctgataag cgaagcgcat caggcatttt tgcttctgtc atcggtttca ggctaaagga
    18961 atctgccttt ttccgaaatc attaatacag ttttttcgcg cagtccagcc agtcaccttt
    19021 gaacggacgc ttcatgtttt cgatagcgtc gatgatgtcg tggtgaacca gctgttcgtt
    19081 ctggatacct acacaacgac cgccgtaacc tgccagcagc agatcgatag cgtaagcgcc
    19141 catacgggaa gccagaatac ggtcgtaagg caccggagaa ccaccgcgct ggatgtggcc
    19201 cagcacagtt gcgcgggttt cacgacctgt ttctttctcg atgaaatgcg ccagttcgtc
    19261 aacatcacac atatgttcgg taatcgccac gatcgcgtgt tttttacctt tcgcgatacc
    19321 cgctttgatt tcgtttacca ggtcttcacg gctgaattca acttccggaa ccacaacgaa
    19381 ttcacagcca ccggcaatgg ccgcagccaa cgtcagatcg ccacaataac ggcccatcac
    19441 ttccaccacg gaaatacgct ggtgagaaga agaggtgtca cgcagacggt cgatcgcttc
    19501 tacaacggtg ctcagcgcag tgaagaaacc gatagtgtag tcagtgcctt tgatgtcgtt
    19561 gtcgatagtg cccggcagac cgatgcacgg gaagcccatt tcggtcagac gcattgaacc
    19621 catgtaggaa ccgtcaccgc cgataaccac cagcgcgtcg ataccacgtt ttttcaggtt
    19681 ttcgatagcc acggcgcgga tgttctcgtc gcggaattcc gggaaacgcg cagaaccgag
    19741 gaacgtaccg ccacggttga tcatgtcaga cacgctgtaa cggtctagct gtaccatacg
    19801 gtcttcatac agacccagat agccgtcata aatacccatt acttccagac cttctgtcag
    19861 cgcagaacga acaaccccgc gaattgcggc gttcatgcct ggcgcatcac cgccgcttgt
    19921 caacacaccg attttcttaa tcatgactac ctctgaactt tggaatgcaa aatgaaatct
    19981 gttgccggaa gtcttcttgc acatcgaagt gatccaacga atgtgcaaat agtataacaa
    20041 tcacttcctg ctgaattgat tcaggtcagg ccaaatggcg gtattttata cacaaaatgc
    20101 gggtctggct ctcttttata ctgattatga aagcatagac cgtttaccct ccctgggtac
    20161 gacggaacag gggtcctgat ggataattac atccgatccc ggaaaacgcc gtaaaatagc
    20221 ctgctctacc tgatccgcca ccatatgtgc ctgaaccaaa ggcagagagt cttccatttc
    20281 caaatgaatc tgaataaagc gggtcggccc tgactgccgc gtgcgaagat cgtgagcgcc
    20341 gctaacaccc ggccaggaag tcacgatatc aataatttct tgccgttcct catcaggcaa
    20401 tgcgcgatcc agtaatgact gtaccgcctc atatcccatg cgtaacgcgc tatataaaat
    20461 atagatgccg attcccaatg caaacagagc atcggcgcga tgccagccgt accaggacaa
    20521 ccccagcgcc agcagaattg cgccgttcat cataacatca gactggtaat gtagcatatc
    20581 agcccgcacc gcctggcttt gcgtccggcg caccacccaa cgctgaaacg agacaaggat
    20641 aatcgtacaa attagcgcca caattgtcac gataaccccg acgcctggat ctatcatcgg
    20701 tgttggagat atcagatgtt gaatacccgt caaaaacagg aatagtgccg aaccggagat
    20761 aaacatactt tgcgccagcg ccgcgaggga ctctgcttta ccgtgaccaa acgagtgatt
    20821 atcgtcggca ggttgcaggg aatatcgcac caccagtaaa ttcgtcaacg acgcgccgat
    20881 atccaccagc gaatccacca gcgcggcgag aatactcacc gacccggtat accaccatgc
    20941 aaaaatttta atcagcaata gcaacgaagc catcgccgtc gcagcaatcg ccgcccgact
    21001 gaccagccgt ccataagatt gattcataaa tactcccgct atcaactgac gctagtataa
    21061 cggaagcaaa tcatctgcaa tgcattaagc agcaggcaaa ttgaggataa aaaaaacccc
    21121 acatcatgtg ggggaagaca gggatggtgt ctatggcaag gaaaacaggg tttactactg
    21181 ggaacgtgag ttgctactac tcaatagctt caacgatgaa cttttttgcc attgcgtcac
    21241 gtcacgcaac tgctccattc gttgttgatg tttctcgttt aaaaccgctt gctgctccgg
    21301 cgttaacagg cgatacattt ggttgcggac ttttgccatc tcaacctgac gagcaatttg
    21361 ctcattcgcc attttttctg cctgtgcgcg cacagcgttt tcatcaaaat tttctgcggt
    21421 gacaaggcga tgcattgtct ccagttcgct aacattaaca ggaggctgtt cgtgccgggc
    21481 ctgttgcata agatctcgca tctgctgacg ctgatgttcg gttaaactta tgccgtcgaa
    21541 catatggctc tgcgtactgc gctgcgtact gcgctgcgta ctgcgctgcg tactgcgctg
    21601 cgtaagttct tcacccggat gccagttatc gcctgaaccg acttcagcag cgtggcttaa
    21661 tgaactgact gccagcgttg aagccatgac ggcagcggta actatgcgca tcatttgctc
    21721 ccaaaatctt tctgtcgcga ttcaacgata gagagtttac gattcaggct gcaaacatgc
    21781 gtcagggggt gtaaaacaac gtaaagtcat ggattagcga cgtctgatga cgtaatttct
    21841 gcctcggagg tatttaaaca atgaataaaa tcctgttagt tgatgatgac cgagagctga
    21901 cttccctatt aaaggagctg ctcgagatgg aaggcttcaa cgtgattgtt gcccacgatg
    21961 gggaacaggc gcttgatctt ctggacgaca gcattgattt acttttgctt gacgtaatga
    22021 tgccgaagaa aaatggtatc gacacattaa aagcacttcg ccagacacac cagacgcctg
    22081 tcattatgtt gacggcgcgc ggcagtgaac ttgatcgcgt tctcggcctt gagctgggcg
    22141 cagatgacta tctcccgaaa ccgtttaatg atcgtgagct ggtggcacgt attcgcgcga
    22201 tcctgcgccg ttcgcactgg agcgagcaac agcaaaacaa cgacaacggt tcaccgacac
    22261 tggaagttga tgccttagtg ctgaatccag gccgtcagga agccagcttc gacgggcaaa
    22321 cgctggagtt aaccggtact gagtttaccc tgctctattt gctggcacag catctgggtc
    22381 aggtggtttc ccgtgaacat ttaagccagg aagtgttggg caaacgcctg acgcctttcg
    22441 accgcgctat tgatatgcac atttccaacc tgcgtcgtaa actgccggat cgtaaagatg
    22501 gtcacccgtg gtttaaaacc ttgcgtggtc gcggctatct gatggtttct gcttcatgat
    22561 aggcagctta accgcgcgca tcttcgccat cttctggctg acgctggcgc tggtgttgat
    22621 gttggttttg atgttaccca agctcgattc acgccagatg accgagcttc tggatagcga
    22681 acagcgtcag gggctgatga ttgagcagca tgtcgaagcg gagctggcga acgatccgcc
    22741 caacgattta atgtggtggc ggcgtctgtt ccgggcgatt gataagtggg caccgccagg
    22801 acagcgtttg ttattggtga ccaccgaagg ccgcgtgatc ggcgctgaac gcagcgaaat
    22861 gcagatcatt cgtaacttta ttggtcaggc cgataacgcc gatcatccgc agaagaaaaa
    22921 gtatggccgc gtggaactgg tcggtccgtt ctccgtgcgt gatggcgaag ataattacca
    22981 actttatctg attcgtccgg ccagcagttc tcaatccgat ttcattaact tactgtttga
    23041 ccgcccgcta ttactgctga ttgtcaccat gttggtcagt acgccgctgc tgttgtggtt
    23101 ggcctggagt ctggcaaaac cggcgcgtaa gctgaaaaac gctgccgatg aagttgccca
    23161 gggaaactta cgccagcacc cggaactgga agcggggcca caggaattcc ttgccgcagg
    23221 tgccagtttt aaccagatgg tcaccgcgct ggagcgcatg atgacctctc agcagcgtct
    23281 gctttctgat atctctcacg agctgcgcac cccgctgacg cgtctgcaac tgggtacggc
    23341 attactgcgc cgtcgtagcg gtgaaagcaa ggaactggag cgtattgaaa ccgaagcgca
    23401 acgtctggac agcatgatca acgatctgtt ggtgatgtca cgtaatcagc aaaaaaacgc
    23461 gctggttagc gaaaccatca aagccaacca gttgtggagt gaagtgctgg ataacgcggc
    23521 gttcgaagcc gagcaaatgg gcaagtcgtt gacagttaac ttcccgcctg ggccgtggcc
    23581 gctgtacggc aatccgaacg ccctggaaag tgcgctggaa aacattgttc gtaatgctct
    23641 gcgttattcc catacgaaga ttgaagtggg ctttgcggta gataaagacg gtatcaccat
    23701 tacggtggac gacgatggtc ctggcgttag cccggaagat cgcgaacaga ttttccgtcc
    23761 gttctatcgg accgatgaag cacgcgatcg tgaatctggc ggtacaggat tggggctggc
    23821 gattgttgaa accgccattc agcagcatcg tggctgggtg aaggcagaag acagcccgct
    23881 gggcggttta cggctggtga tttggttgcc gctgtataag cggagttaaa ctccgcattt
    23941 gtaggcagga taaggcgttt acgccgcatc cggcatttga gcaggatgcc tgatgcgacg
    24001 ctgatagcgt cttatcaggc ctacactccg ggggttattt tccccacaac cggcgggaaa
    24061 aatcttcgat cttgccgctc agtcggcgct tttgcatcgt ccgcgtccag cttttcgata
    24121 acccggcggc ggagagtaaa cggtgatact gatcgtcatc aaacggcata tgccatgcga
    24181 tggcggcagc ctcctgcacg gtcacatcgc tgacacggga aaccaactcc agcggcgcgt
    24241 ccgcagacac tttccctggc gctatcacgc tatacaacca ccccacctta cctgtgtttt
    24301 gcatcaactg cgctatatcg ctgatatcaa aatggtaatt gagtttatag caaggcgagc
    24361 gcggctggct gacctgaatt aatgcctctc cccagcggaa aatatcgccc atataaacat
    24421 tactttccgt caggccgtcg gttgagaggt tttcaccaaa cgcaggcgca acaaacaact
    24481 ccgcctgttc cggaaattcc cgcgcccagt agagataatg ctcacgagga taatgacaca
    24541 gcgctctgtc tggcccacca tgaacctttt tctccgcctg ctcgtcacct tccagcccca
    24601 gctccgtcag catcaactca ccatcaacct ggattttggc aattgcgctg ggtttgcctt
    24661 cgggataagc ctgaatcttg cctgtgtata catcaaccgg atatcgcatc tgttccctct
    24721 ccacgagaaa tttccccatt agaccatatt tattttatgt caggcgtgct gttttcgcgg
    24781 taagtatcca ggcaggaact caatagcaaa ccggacgaac gttagttcat ccggctgtgg
    24841 ggattaagga agcaggttta tttcaccgta cctaaaattt cgattttcgc tgctctggct
    24901 ttgactttac gtgaccagat agaggtaaga attggcacca gaatcgaagt cacaatgacc
    24961 gccgtcgcta ccagcgaagt tgctgccgga gccatcggtt taaacgcagg caccatttct
    25021 gcaatcagca taggtgtcgc taccgcggcc cctgcggaac tggaagcggc aattccggca
    25081 gtgccatcgc caccgccaat caatttatcg gcgataatca acggaatacc ggtcacgata
    25141 attactgcca cacccaacag gatccccagc aaaccagtct gggcaatcac agtcaaatca
    25201 atggtattgc ccagcgcgaa ggcaaagaat ggaatcagcg tttgcaccgc tttgctgaaa
    25261 aattctcgta attcagggtc aaggttcccc agggcaaagc ccaccaggaa cggtaatact
    25321 gcgccgacga aaacatgcgg ttcaaacgag gcaatccctg cagtgcccag aataatcatc
    25381 gtcatgagcg gcccggactc caacgacatc aacacaaatg ccccagcttc ttcttttgtg
    25441 ccgtactgct gcatgatgga agcgtaaagt ccgccattgg tcatatccat cgccgccacc
    25501 agcgccagcg ttgaaagtcc ggcaaagaat ccaacttcaa caccatgttc cggaataatg
    25561 cgcgaggcaa ttgccgcaac cacccacgcg acggcaattt ttgttaccac cagcgtaccg
    25621 gatttacgca ataccgttcc cgtcgcgctt aattttattg acgcccccat gcaaaaaaac
    25681 cacaccgcca gaatggacac cgtaccggta atcatcccgt tggtgaatga tccaaaatat
    25741 ttccccgccc ccggcgagaa ggtgtggcac agtgcgccaa ggaatagcgg gacgagcatc
    25801 atcccccccc gggattttct caatcgagcg ttttatctgc atttccatca cctgtcggca
    25861 tatttttaag ggctgatgcg taattcctca atggagcatc agtgttgatg gaaacgaaga
    25921 tagacattca tttaatcaat aaaagtgatc aaaaccacat caattgaaac gctgttttat
    25981 ttttattgga tcattgtttt tattttgaaa ttgatcacaa aaaaaccacc gccgttggcg
    26041 atggttcatt ttttaagctg atatgcggcg taaacgcctc attgcagcag gcggcaaatg
    26101 attatttttt cgccgcgaaa cgtgccgctg cttcatccca gttcaccacg ttccagaact
    26161 ctttgatgta gtccggacgg cggttctgga atttcaggta gtaagcatgt tcccacacat
    26221 ccaggcccag aatcgggaag ccggaagcgc cagaaatagc ttcacccatc agcggggaat
    26281 cctggttagc agtagaaacc accgccagtt tatcgccttt cagcaccagc catgcccagc
    26341 cggaaccaaa gcgggaagct gccgctttct caaattctgc tttgaagtta tcaacggagc
    26401 cgaagtcacg ttcgatagcc gctttcaggt caccctgtaa ggtggtgcct tttttcagac
    26461 ctttccagaa caggctgtgg ttagcgtgac cgccagcgtt gttgcgcagt acggttttct
    26521 tgtctgctgg cagctggtcc agtttggtga tcagctcttc aaccggcagg ttggcaaatt
    26581 ctggcaggct ttccagcgcc gcgttggcgt tgttgacgta ggtctgatgg tgtttggtgt
    26641 ggtggatttc catggtctgc ttatcgaagt gcggttccag ggcatcgtaa gcatacggca
    26701 gggatggcag ggtatagctc atattcatct ccagtattgt cgggcggccg attgttaatg
    26761 cgcgtaagca gttggttcat tatagttaat taaatgatat tgaaaatgat tatcaatgcc
    26821 gtacttttcg taagggtatg gttttgcagg aaaattcccg agatgtgaag caaatcaccc
    26881 acttaatgcc gtgattgcca gtaaatcgac aacggcggca acaggcgaaa ggttaatcga
    26941 cagcacgatt tttacactca tctcgtcgga gatgtgacgc gacgaaaaat gatgaggata
    27001 agaagatgag taacgcgatt acgatgggga tattttggca tttgatcggc gcggccagtg
    27061 cagcctgttt ttacgctccg ttcaaaaaag taaaaaaatg gtcatgggaa accatgtggt
    27121 cagttggtgg gattgtttcg tggattattc tgccgtgggc catcagcgcc ctgttactgc
    27181 cgaatttctg ggcgtattac agctcgttta gtctctctac gctgctgcct gtttttctgt
    27241 tcggcgctat gtgggggatc ggtaatatca actacggcct gaccatgcgt tatctcggca
    27301 tgtcgatggg aattggcatc gccattggca ttacgttgat tgtcggtacg ctgatgacgc
    27361 caattatcaa cggcaatttc gatgttctgc ttaataccga aggcggacgc atgacgttgc
    27421 tcggcgttct ggtggcgctg attggtgtag ggattgtgac tcgcgccggg cagttgaaag
    27481 agcgcaaaat gggcattaaa gccgaagagt tcaacctgaa aaaagggctg gtgctggcgg
    27541 tgatgtgcgg cattttctct gccggtatgt cttttgcgat gaacgccgca aaaccgatgc
    27601 atgaagccgc tgccgcactg ggcgtcgatc cactgtatgt cgctctgcca agctatgtca
    27661 tcatcatggg cggcggcgcg atcatcaacc tcggtttctg cttcattcgt ctggcaaaag
    27721 tgaaggattt gtcgctaaaa gccgacttct cgctggcaaa accgctgatc attcacaatg
    27781 tgttactctc agcactgggc gggttgatgt ggtatctgca attctttttc tatgcctggg
    27841 gccacgcccg cattccggcg cagtatgact acatcagttg gatgctgcat atgagtttct
    27901 atgtattgtg cggcggtatc gtcgggctgg tgctgaaaga gtggaacaat gcaggtcgcc
    27961 gtccggtaac ggtgttgagc ctcggttgtg tggtgattat tgtcgccgcc aacatcgtcg
    28021 gcatcggcat ggcgaattaa tctttctgcg aattgagatg acgccactgg ctgggcgtca
    28081 tcccggtttc ccgggtaaac accaccgaaa aatagttact atcttcaaag ccacattcgg
    28141 tcgaaatatc actgattaac aggcggctat gctggagaag atattgcgca tgacacactc
    28201 tgacctgccg cagatattga ttgatggtca ttccagtctg ctggcgaaat tgctgacgca
    28261 aaacgcgctc actgcacgat gcctcatcac aaaatttatc cagcgcaaag ggacttttca
    28321 ggctagccgc cagccgggta atcagcttat ccagcaacgt ttcgctggat gttggcggca
    28381 acgaatcact ggtgtaacga tggcgattca gcaacatcac caactgcccg aacagcaact
    28441 cagccatttc gttagcaaac gacacatgct gactactttc atgctcaagc tgaccgataa
    28501 cctgccgcgc ctgcgccatc cccacgctac ctaagcgcca gtgtggttgc cctgcgctgg
    28561 cgctaaatcc cggaatcgct ccctgccagt caagattcag cttcagccgc tccgggcaat
    28621 aaataatatt ctgcaaaacc agatcgttaa cggaagcgta ggagtgttta tcgtcagcat
    28681 gaatgtaaaa gagatcgcca cgggtaatgc gataagggcg atcgttgagt acatgcagac
    28741 cattaccgcg ccagacaatc accagctcac aaaaatcatg tgtatgttcg gcaaaaacat
    28801 cttgcggata acggtcagcc acagcgactg cctgctggtc gctggcaaaa aaatcatctt
    28861 tgagaagttt taactgatgc gccaccgtgg ctacctcggc cagagaacga agttgattat
    28921 tcgcaatatg gcgtacaaat acgttgagaa gattcgcgtt attgcagaaa gccatcccgt
    28981 ccctggcgaa tatcacgcgg tgaccagtta aactctcggc gaaaaagcgt cgaaaagtgg
    29041 ttactgtcgc tgaatccgca gcgataggcg atgtcagtaa cgctggcctc gctgtgacgt
    29101 agcagatgtc gggccttcat cagtcgcagg cggttcaggt aacgctgagg cgtcagtccc
    29161 gtttgctgct taagctgccg atgtagcgta cgcagtgaaa gagaaaattg atccgccacg
    29221 gcatcccaat tcacctcatc ggcaaaatgg tcctccagcc aggccagaag caagttgaga
    29281 cgtgatgcgc tgttttccag gttctcctgc aaactgcttt tacgcagcaa gagcagtaat
    29341 tgcataaaca agatctcgcg actggcggtc gagggtaaat cattttcccc ttcctgctgt
    29401 tccatctgtg caaccagctg tcgcacctgc tgcaatacgc tgtggttaac gcgccagtga
    29461 gacggatact gcccatccag ttcttgtggc agcaactgat tcagcccggc gagaaactga
    29521 aatcgatccg gcgagcgata cagcacattg gtcagacaca gattatcggt atgttcatac
    29581 agatgccgat catgatcgcg tacgaaacag accgtgccac cggtgatggt atagggctgc
    29641 ccattaaaca catgaatacc cgtgccatgt tcgacaatca caatttcatg aaaatcatga
    29701 tgatgttcag gaaaatccgc ctgcgggagc cggggttcta tcgccacgga cgcgttacca
    29761 gacggaaaaa aatccacact atgtaatacg gtcatactgg cctcctgatg tcgtcaacac
    29821 ggcgaaatag taatcacgag gtcaggttct taccttaaat tttcgacgga aaaccacgta
    29881 aaaaacgtcg atttttcaag atacagcgtg aattttcagg aaatgcggtg agcatcacat
    29941 caccacaatg aagcaaattg tgaacatcat cacgttcatc tttccctggt tgccaatggc
    30001 ccattttcct gtcagtaacg agaaggtcac gaattcaggc gctttttaga ctggtcgtaa
    30061 tgaaattcag caggatcaca ttatgacctt tcgcaattgt gtcgccgtcg atctcggcgc
    30121 atccagtggg cgcgtgatgc tggcgcgtta cgagcgtgaa tgccgcagcc tgacgctgcg
    30181 cgaaatccat cgttttaaca atggcctgca tagccagaac ggttatgtca cctggaatgt
    30241 ggatagcctg gaaagtgcca ttcgccttgg attaaacaag gtgtgcgagg aagggattcg
    30301 tatcgatagc attgggattg atacctgggg cgtggacttt gtgctgctcg accaacaggg
    30361 tcagcgtgtg ggcctgcccg ttgcttatcg cgatagccgc tccaatggcc taatggcgca
    30421 ggcacagcaa caactcggca aacgcgatat ttatcaacgt agcggcatcc agtttctgcc
    30481 cttcaatacg ctttatcaac tgcgtgcgct gacggagcaa caacctgaac ttattccaca
    30541 cattgctcac gctctgctga tgccggatta cttcagctat cgcctgaccg gcaagatgaa
    30601 ctgggaatat accaatgcca ccaccacaca actggtcaat atcaatagcg acgactggga
    30661 cgagtcgcta ctggcgtgga gcggggccaa caaagcctgg tttggtcgcc cgacgcatcc
    30721 gggtaatgtc attgggcact ggatttgccc gcagggtaat gagattccgg tggtcgccgt
    30781 tgccagccat gataccgcca gcgcggttat cgcctcgccg ttaaacggtt cacgcgctgc
    30841 ttatctctct tctggcacct ggtcattgat gggcttcgaa agccagacgc catttaccaa
    30901 tgacacggcg ctggcagcca acataaccaa tgaaggcggg gcggaaggtc gctatcgggt
    30961 gctgaaaaat attatgggct tatggctgct tcagcgagtg cttcaggagc ggcaaatcaa
    31021 cgatctcccg gcgcttatcg ccgcgacaca ggcacttccg gcctgccgct tcatcatcaa
    31081 tcccaatgac gatcgcttta ttaatcctga ggcgatgtgc agcgaaattc aggctgcgtg
    31141 tcgggaaacg gcgcaaccga tcccggaaag tgatgctgaa ctggcgcagc tacgcggtga
    31201 agatttctcg caactgcata ttgtcggcgg cggctgccag aacacgctgc tcaaccagct
    31261 atgtgccgat gcctgcggta ttcgggtgat cgccgggcct gttgaagcct cgacgctcgg
    31321 caatatcggc atccagttaa tgacgctgga tgaactcaac aatgtggatg atttccgtca
    31381 ggtcgtcagc accaccgcga atctgaccac ctttacccct aatcctgaca gtgaaattgc
    31441 ccactatgtg gcgcagcttc actctacacg acagacaaag gagctttgcg catgaccact
    31501 caactggaac aggcctggga gctggcgaaa cagcgtttcg cggcggtggg gattgatgtc
    31561 gaggaggcgc tgcgccaact tgatcgttta cccgtttcaa tgcactgctg gcagggcgat
    31621 gatgtttccg gttttgaaaa cccggaaggt tcgctgaccg gggggattca ggccacaggc
    31681 aattatccgg gcaaagcgcg taatgccagt gagctacgtg ccgatctgga acaggctatg
    31741 cggctgattc cggggccgaa acggcttaat ttccatgcca tctatctgga atcagatacg
    31801 ccagtctcgc gcgaccagat caaaccagag cacttcaaaa actggggtga atgggcgaaa
    31861 gccaatcagc tcggtctgga ttttaacccc tcctgctttt cgcatccgct aagcgccgat
    31921 ggctttacgc tctcgcatcc cgacgacagc attcgccagt tctggattga tcactgcaaa
    31981 gccagccgtc gcgtttcggc ctattttggc gagcaactcg gcacaccatc ggtgatgaac
    32041 atctggatcc cggatggtat gaaagatatc accgttgacc gtctcgcccc gcgtcagcgt
    32101 ctgctggcag cactggatga ggtgatcagc aagaagctaa accctgcgca ccatatcgac
    32161 gccgttgaga gcaaattgtt tggcattggc gcagagagct acacggttgg ctccaatgag
    32221 ttttacatgg ggtatgccac cagccgccag actgcgctgt gcctagacgc cgggcacttc
    32281 cacccgactg aagtgatttc cgacaagatt tccgccgcca tgctgtatgt gccgcagttg
    32341 ctgctgcacg tcagccgtcc ggttcgctgg gactgcgatc acgtagtgct gctggatgat
    32401 gaaacccagg caattgccag tgagattgtg cgtcacgatc tgtttgaccg ggtgcatatc
    32461 ggccttgact tcttcgatgc ctctatcaac cgcattgccg cgtgggtcat tggtacacgc
    32521 aatatgaaaa aagccctgct gcgtgcgttg ctggaaccta ccgctgagct gcgcaagctg
    32581 gaagcggcgg gcgattacac tgcgcgtctg gcactgctgg aagagcagaa atcgttgccg
    32641 tggcaggcgg tctgggaaat gtattgccaa cgtcacgata cgccagcagg tagcgaatgg
    32701 ctggagagcg tgcgggctta tgaaaaagaa attttgagcc agcgtgggta aacactgccg
    32761 gatgcggcgc gagcgcctta tccggcctac gggtcgtgca tctgacaaca ccgaatttac
    32821 aggaacacag aacatgcaaa acattaccca gtcctggttt gtccagggaa tgatcaaagc
    32881 caccaccgat gcctggctga aaggctggga cgaacgcaac ggcggcaacc tgacgctgcg
    32941 cctggatgac gccgatatcg cgccttataa agacaacgtc catgcacaac cgcgctatat
    33001 cccgctcagc cagcccatgc ctttactggc aaatacaccg tttattgtca ccggctccgg
    33061 caaattcttc cgtaacgtcc agctcgatcc tgcagctaac ttaggcgtcg taaaagtcga
    33121 cagcgatggc gcgggctacc atattctctg ggggttaacc aacgaagccg tcccgacatc
    33181 cgaactcccg gcgcactttc tctcccactg cgagcgcatt aaagccacca acggtaaaga
    33241 tcgggtgatc atgcactgcc acgccaccaa cctgatcgcc ctcacctatg tactggaaaa
    33301 cgacaccgcg gtctttactc gccaactgtg ggaaggcagc accgagtgtc tggtggtatt
    33361 cccggatggc gttggcattc tgccgtggat ggtgcccggc acggacgaaa tcggccaggc
    33421 gaccgcacaa gagatgcaaa aacattcgct ggtgttgtgg cccttccacg gcgtcttcgg
    33481 cagcgggtcg acgttggatg aaacattcgg tttaatcgac accgcagaaa aatcagcaca
    33541 agtattagtg aaggtttatt cgatgggcgg catgaaacag accatcagcc gtgaagagtt
    33601 gatagcgctc ggcaagcgct tcggcgttac accactagcc agtgcgctgg cgctgtaagg
    33661 agcaaacatg atccgcaaag cctttgtcat gcaggttaac cccgacgccc acgaagagta
    33721 tcagcgtcgg cataacccca tctggccgga actggaagca gtgttgaaat ctcacggtgc
    33781 gcataactac gccatttacc tcgacaaagc gcgtaatctg ctgtttgcca cggtagagat
    33841 tgaatctgaa gaacggtgga atgcggtagc cagtactgat gtttgccaac gttggtggaa
    33901 atatatgacc gatgttatgc ccgctaaccc ggataacagc ccggtgagta gcgagctg
//
LOCUS       DADMJE010000027        33473 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.028, whole genome shotgun sequence.
ACCESSION   DADMJE010000027 DADMJE010000000
VERSION     DADMJE010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33473
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.028"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            520..759
                     /locus_tag="JN001_001157"
     CDS             520..759
                     /locus_tag="JN001_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY9052460.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            complement(947..1924)
                     /gene="intI2"
                     /locus_tag="JN001_001158"
                     /pseudo
     CDS             complement(947..1924)
                     /gene="intI2"
                     /locus_tag="JN001_001158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023994230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
     gene            2256..2729
                     /locus_tag="JN001_001159"
     CDS             2256..2729
                     /locus_tag="JN001_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY9052461.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            2824..3348
                     /gene="sat2"
                     /locus_tag="JN001_001160"
     CDS             2824..3348
                     /gene="sat2"
                     /locus_tag="JN001_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY9052462.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            3406..4194
                     /gene="aadA1"
                     /locus_tag="JN001_001161"
     CDS             3406..4194
                     /gene="aadA1"
                     /locus_tag="JN001_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY9052463.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            4270..4767
                     /locus_tag="JN001_001162"
     CDS             4270..4767
                     /locus_tag="JN001_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052464.1"
                     /translation="MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYD
                     ISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYY
                     VIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKI
                     MYLSN"
     gene            4828..5199
                     /locus_tag="JN001_001163"
     CDS             4828..5199
                     /locus_tag="JN001_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052465.1"
                     /translation="MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELD
                     NAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATY
                     FSPNGQLVGLVAYIDAEWMDE"
     gene            5609..5986
                     /locus_tag="JN001_001164"
     CDS             5609..5986
                     /locus_tag="JN001_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052466.1"
                     /translation="MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSF
                     DHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAA
                     LKNSLDYYYGSSVIPPQNHGGYL"
     gene            6009..6161
                     /locus_tag="JN001_001165"
                     /pseudo
     CDS             6009..6161
                     /locus_tag="JN001_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011069623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(6217..7833)
                     /locus_tag="JN001_001166"
     CDS             complement(6217..7833)
                     /locus_tag="JN001_001166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY9052467.1"
                     /translation="MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTR
                     FTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQ
                     SSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDH
                     LEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESW
                     CFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAG
                     DGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRA
                     RKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAF
                     DELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLE
                     VDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGV
                     NHPKGLGELQVSREDMEGWAERVVREQFTH"
     gene            complement(7834..9360)
                     /locus_tag="JN001_001167"
     CDS             complement(7834..9360)
                     /locus_tag="JN001_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY9052468.1"
                     /translation="MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVA
                     TLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQG
                     AVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPYCPKHGALVF
                     FDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIAPLLDAPRAQELSPSLEQW
                     TLFYQRLAQDLGLTKSKHIRHDLVAERVRQTFSDEALEKLDLKLAENKDTCWLKSIFR
                     KHRKAFSYLQHSIVWQALLPKLTVIEALQQASALTEHSITTRPVSQSVQPNSEDLSVK
                     HKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHDRDWLVHWNQQHQQERLAPAPRVDW
                     NQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLKQTPNGTSLAKNLQKLPLVALCLKR
                     YSESVEDYQIRRISQAFIKLKQEDVELRRWRLLRSATLSKERITEEAQRFLEMVYGEE
                     "
     gene            complement(9363..11030)
                     /locus_tag="JN001_001168"
     CDS             complement(9363..11030)
                     /locus_tag="JN001_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY9052469.1"
                     /translation="MSATRIQAVYRDTGVEAYRDNPFIEALPPLQESVNSAASLKSSL
                     QLTSSDLQKSRVIRAHTICRIPDDYFQPLGTHLLLSERISVMIRGGYVGRNPKTGDLQ
                     KHLQNGYERVQTGELETFRFEEARSTAQSLLLIGCSGSGKTTSLHRILATYPQVIYHR
                     ELNVEQVVYLKIDCSHNGSLKEICLNFFRALDRALGSNYERRYGLKRHGIETMLALMS
                     QIANAHALGLLVIDEIQHLSRSRSGGSQEMLNFFVTMVNIIGVPVMLIGTPKAREIFE
                     ADLRSARRGAGFGAIFWDPIQQTQRGKPNQEWIAFTDNLWQLQLLQRKDALLSDEVRD
                     VWYELSQGVMDIVVKLFVLAQLRALALGNERITAGLLRQVYQDELKPVHPMLEALRSG
                     IPERIARYSDLVVPEIDKRLIQLQLDIAAIQEQTPEEKALQELDTEDQRHLYLMLKED
                     YDSSLLIPTIKKAFSQNPTMTRQKLLPLVLQWLMEGETVVSELEKPSKSKKVSAIKVV
                     KPSDWDSLPDTDLRYIYSQRQPEKTMHERLKGKGVIVDMASLFKQAG"
     gene            complement(11027..13135)
                     /locus_tag="JN001_001169"
     CDS             complement(11027..13135)
                     /locus_tag="JN001_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000267723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HAY9052470.1"
                     /translation="MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELL
                     LMQYLDEGRLVRTDDPYVHLDLEEPSVDSVSFQKREEDYRKILPIINSKDRFDPKVRS
                     ELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDYKNSGAPGERRSATGTAKIGR
                     AREYGKGEGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAYRRFVDLFAQYFPRIPQED
                     YPTLRQFRYFYDREYPKAQRLKSRVKAGVYKKDVRPLSSTATSQALGPGSRYEIDATI
                     ADIYLVDHHDRQKIIGRPTLYIVIDVFSRMITGFYIGFENPSYVVAMQAFVNACSDKT
                     AICAQHDIEISSSDWPCVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAK
                     GIVESTFRTLQAEFKSFAPGIVEGSRIKSHGETDYRLDASLSVFEFTQIILRTILFRN
                     NHLVMDKYDRDADFPTDLPSIPVQLWQWGMQHRTGSLRAVEQEQLRVALLPRRKVSIS
                     SFGVNLWGLYYSGSEILREGWLQRSTDIARPQHLEAAYDPVLVDTIYLFPQVGSRVFW
                     RCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAKQDELTKRRELEAFIQQTIQKANKL
                     TPSTTEPKSTRIKQIKTNKKEAVTSERKKRAEHLKPSSSGDEAKVIPFNAVEADDQED
                     YSLPTYVPELFQDPPEKDES"
     gene            complement(13122..13943)
                     /locus_tag="JN001_001170"
     CDS             complement(13122..13943)
                     /locus_tag="JN001_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HAY9052471.1"
                     /translation="MAKANSSFSEVQIARRIKEGRGQGHGKDYIPWLTVQEVPSSGRS
                     HRIYSHKTGRVHHLLSDLELAVFLSLEWESSVLDIREQFPLLPSDTRQIAIDSGIKHP
                     VIRGVDQVMSTDFLVDCKDGPFEQFAIQVKPAAALQDERTLEKLELERRYWQQKQIPW
                     FIFTDKEINPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGDENIINVCKQVD
                     IAYDLELGKTLSEIRALTANGFIKFNIYKSFRANKCADLCISQVVNMEELRYVAN"
     gene            complement(14103..15932)
                     /gene="glmS"
                     /locus_tag="JN001_001171"
     CDS             complement(14103..15932)
                     /gene="glmS"
                     /locus_tag="JN001_001171"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HAY9052472.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(16094..17464)
                     /gene="glmU"
                     /locus_tag="JN001_001172"
     CDS             complement(16094..17464)
                     /gene="glmU"
                     /locus_tag="JN001_001172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HAY9052473.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILISNGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(17815..18234)
                     /gene="atpC"
                     /locus_tag="JN001_001173"
     CDS             complement(17815..18234)
                     /gene="atpC"
                     /locus_tag="JN001_001173"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HAY9052474.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(18255..19637)
                     /gene="atpD"
                     /locus_tag="JN001_001174"
     CDS             complement(18255..19637)
                     /gene="atpD"
                     /locus_tag="JN001_001174"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HAY9052475.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(19664..20527)
                     /gene="atpG"
                     /locus_tag="JN001_001175"
     CDS             complement(19664..20527)
                     /gene="atpG"
                     /locus_tag="JN001_001175"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HAY9052476.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHLYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(20578..22119)
                     /gene="atpA"
                     /locus_tag="JN001_001176"
     CDS             complement(20578..22119)
                     /gene="atpA"
                     /locus_tag="JN001_001176"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HAY9052477.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(22132..22665)
                     /gene="atpH"
                     /locus_tag="JN001_001177"
     CDS             complement(22132..22665)
                     /gene="atpH"
                     /locus_tag="JN001_001177"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HAY9052478.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(22680..23150)
                     /gene="atpF"
                     /locus_tag="JN001_001178"
     CDS             complement(22680..23150)
                     /gene="atpF"
                     /locus_tag="JN001_001178"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HAY9052479.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(23212..23451)
                     /gene="atpE"
                     /locus_tag="JN001_001179"
     CDS             complement(23212..23451)
                     /gene="atpE"
                     /locus_tag="JN001_001179"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HAY9052480.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(23498..24313)
                     /gene="atpB"
                     /locus_tag="JN001_001180"
     CDS             complement(23498..24313)
                     /gene="atpB"
                     /locus_tag="JN001_001180"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HAY9052481.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(24322..24702)
                     /gene="atpI"
                     /locus_tag="JN001_001181"
     CDS             complement(24322..24702)
                     /gene="atpI"
                     /locus_tag="JN001_001181"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HAY9052482.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(25319..25942)
                     /gene="rsmG"
                     /locus_tag="JN001_001182"
     CDS             complement(25319..25942)
                     /gene="rsmG"
                     /locus_tag="JN001_001182"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HAY9052483.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(26006..27895)
                     /gene="mnmG"
                     /locus_tag="JN001_001183"
     CDS             complement(26006..27895)
                     /gene="mnmG"
                     /locus_tag="JN001_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HAY9052484.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(28274..28717)
                     /gene="mioC"
                     /locus_tag="JN001_001184"
     CDS             complement(28274..28717)
                     /gene="mioC"
                     /locus_tag="JN001_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HAY9052485.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(28807..29265)
                     /gene="asnC"
                     /locus_tag="JN001_001185"
     CDS             complement(28807..29265)
                     /gene="asnC"
                     /locus_tag="JN001_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HAY9052486.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQHPIMRTIKP"
     gene            29417..30409
                     /gene="asnA"
                     /locus_tag="JN001_001186"
     CDS             29417..30409
                     /gene="asnA"
                     /locus_tag="JN001_001186"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HAY9052487.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVIHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYLDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(30414..31865)
                     /gene="viaA"
                     /locus_tag="JN001_001187"
     CDS             complement(30414..31865)
                     /gene="viaA"
                     /locus_tag="JN001_001187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HAY9052488.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWSEALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(31859..33355)
                     /gene="ravA"
                     /locus_tag="JN001_001188"
     CDS             complement(31859..33355)
                     /gene="ravA"
                     /locus_tag="JN001_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HAY9052489.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         8527 a         8453 c         7809 g         8684 t
ORIGIN      
        1 tcggcagccc tgtgggcgga caaaatagtt gggaactggg aggggtggaa atggagtttt
       61 taaggattat ttagggaaga gtgacaaaat agatgggaac tgggtgtagc gtcgtaagct
      121 aatacgaaaa ttaaaaatga caaaatagtt tggaactaga tttcacttat ctggttaact
      181 aatctagcta acctgccgct cagcttagta cgatcctata tccaactgat cataatcctt
      241 tcatcagtat cccaaattaa atccccctcc tagactgcct caccaacact ttacagtgat
      301 cccgtatttc cggacaggtg attgattttt ttcgcttgta caggtgttaa gccacagtta
      361 tcttgatgtg gacattatgc attgtaatag cccattaaca tgcgctaaga gcataaatta
      421 atatacagta acaagcatta cgaggtgcta atgtttggaa agcagcctct tccaactaca
      481 ataataagtt aactatcctc cacccacaaa taattacaaa tgaccccttt ccgctataac
      541 tccgatctca ccagcggctc gctacaaacc cgagagtgtc gcattattac tggcttgtta
      601 ctccaagagc ttgatgaagc tgcctgggat aaagccatgt ataaggaaaa tgtgcttcag
      661 aaacgcacgc aatctacggt aagacgtatt tcttcagcgc ttagaaaacg cctagaacac
      721 ctaagctctg acttttgggc ttttgcgttt ttatgttagg cattgtctgg caactggagg
      781 aagtgtaatg accatgaatg gtcactgtga ttgacagtat cttgcttaaa cttatctgaa
      841 caatggtaga actggctcat atttatcccc tctatgattg tttatctttt tcaccataaa
      901 aagtatcagg ggctactcag ggctacataa agatatttat ctacttttac tgattgataa
      961 gtagcatcag tccatccgca ggactggtgg tgccggcaaa atgctgaccc aacacatgcg
     1021 tatagatttg cgtggtctta acatcgttat gccctaagag ttcttgcaca gtgcgaatat
     1081 cacgccccgc ttgtaataga tgcgtagcaa acgagtgacg aaatgtatga caagtgacac
     1141 gcttgctaac gatgcctgct ttttgtacgg ctgccttcaa tgcctttcgc gcaacggagt
     1201 catgcagatg atggcggcat aatttgccgt tatacgggtg gttgcagagc gtgctggagg
     1261 gaaagacaaa catccacgcc gcttgtcgat aagcagaagg gtatttgtga tctaaagcaa
     1321 aaggcagcga tggccctacg ccttgtaagt tgtcgtcttg ctgaataagc cgcgcttgct
     1381 caatgagtta ttttattgct gggattaggc gcgtgggcag taggctgttt ctgcttttcc
     1441 cacccttacc gtcatgcaca gtgatgcagc cattatcaaa atcaaaatct ttaacccgca
     1501 aacgcaagca ttcattaatg cgcaaacctg caccatacag cagcgtaaaa ataacttggt
     1561 tgcgagtatc cataacctgc aaaatgcgtt gcacttcatt tgcagagata acagagggta
     1621 gccgtctagg cttgcttgca gggatataat caatatcgcc caacggctgt tgtaaaaacc
     1681 tgttgtacaa aaaagctagg gcatttaaag cgattttctg cgtgtttatg gctacatgtc
     1741 tgctgtttgc taagctggat aaaaacagcc tgacctcttc actgcccatg gtctgaggat
     1801 gacgtttttt gtgaaacaga ataaaacgct taatccagtg caggtaagtt ttttcagttt
     1861 tcagcgcata acctttttgt cgcatatccg tgcgtataga atttaaaaat ggactgttag
     1921 acataaaacg ctccttgtct tgcaactgtc tgcctataca gcctattcta gctgggattt
     1981 aaaaaagtgc ctgtttttta cgcctagaga tgcttgttta ccggtagagt tttaatttaa
     2041 tgctaaataa attaaaatgt tatgagttct ttgggtgaga taatgtgcat cgtgcaagca
     2101 ggatagacgg catgcacgat ttgtaataac agagtgtctt gtatttttaa agaaagtcta
     2161 tttaatacaa gtgattatat taattaacgg taagcatcag cgggtgacaa aacgagcatg
     2221 cttactaata aaatgttaac ctctgaggaa gaattgtgaa actatcacta atggtagcta
     2281 tatcgaagaa tggagttatc gggaatggcc ctgatattcc atggagtgcc aaaggtgaac
     2341 agctcctgtt taaagctatt acctataacc aatggctgtt ggttggacgc aagacttttg
     2401 aatcaatggg agcattaccc aaccgaaagt atgcggtcgt aacacgttca agttttacat
     2461 ctgacaatga gaacgtattg atctttccat caattaaaga tgctttaacc aacctaaaga
     2521 aaataacgga tcatgtcatt gtttcaggtg gtggggagat atacaaaagc ctgatcgatc
     2581 aagtagatac actacatata tctacaatag acatcgagcc ggaaggtgat gtttactttc
     2641 ctgaaatccc cagcaatttt aggccagttt ttacccaaga cttcgcctct aacataaatt
     2701 atagttacca aatctggcaa aagggttaac aagtggcagc aacggattcg caaacctgtc
     2761 acgccttttg taccaaaagc cgcgccaggt ttgcgatccg ctgtgccagg cgttaggcgt
     2821 catatgaaga tttcggtgat ccctgagcag gtggcggaaa cattggatgc tgagaaccat
     2881 ttcattgttc gtgaagtgtt cgatgtgcac ctatccgacc aaggctttga actatctacc
     2941 agaagtgtga gcccctaccg gaaggattac atctcggatg atgactctga tgaagactct
     3001 gcttgctatg gcgcattcat cgaccaagag cttgtcggga agattgaact caactcaaca
     3061 tggaacgatc tagcctctat cgaacacatt gttgtgtcgc acacgcaccg aggcaaagga
     3121 gtcgcgcaca gtctcatcga atttgcgaaa aagtgggcac taagcagaca gctccttggc
     3181 atacgattag agacacaaac gaacaatgta cctgcctgca atttgtacgc aaaatgtggc
     3241 tttactctcg gcggcattga cctgttcacg tataaaacta gacctcaagt ctcgaacgaa
     3301 acagcgatgt actggtactg gttctcggga gcacaggatg acgcctaaca attcattcaa
     3361 gccgacaccg cttcgcggcg cggcttaatt caggagttaa acatcatgag ggaagcggtg
     3421 atcgccgaag tatcgactca actatcagag gtagttggcg tcatcgagcg ccatctcgaa
     3481 ccgacgttgc tggccgtaca tttgtacggc tccgcagtgg atggcggcct gaagccacac
     3541 agtgatattg atttgctggt tacggtgacc gtaaggcttg atgaaacaac gcggcgagct
     3601 ttgatcaacg accttttgga aacttcggct tcccctggag agagcgagat tctccgcgct
     3661 gtagaagtca ccattgttgt gcacgacgac atcattccgt ggcgttatcc agctaagcgc
     3721 gaactgcaat ttggagaatg gcagcgcaat gacattcttg caggtatctt cgagccagcc
     3781 acgatcgaca ttgatctggc tatcttgctg acaaaagcaa gagaacatag cgttgccttg
     3841 gtaggtccag cggcggagga actctttgat ccggttcctg aacaggatct atttgaggcg
     3901 ctaaatgaaa ccttaacgct atggaactcg ccgcccgact gggctggcga tgagcgaaat
     3961 gtagtgctta cgttgtcccg catttggtac agcgcagtaa ccggcaaaat cgcgccgaag
     4021 gatgtcgctg ccgactgggc aatggagcgc ctgccggccc agtatcagcc cgtcatactt
     4081 gaagctaggc aggcttatct tggacaagaa gatcgcttgg cctcgcgcgc agatcagttg
     4141 gaagaatttg ttcactacgt gaaaggcgag atcaccaagg tagtcggcaa ataatgtcta
     4201 acaattcgtt caagccgacg ccgcttcgcg gcgcggctta actcaagcgt tagagagctg
     4261 gggaagacta tgcgcgatct gttgaaggtg gttctaagcc tcgtacttgc gatggcatcg
     4321 gggcaggcac ttgctgacct gccaattgtt ttagtggatg aagctcgtct tccctatgac
     4381 tactccccat ccaactacga catttctcca agcaactacg acaactccat aagcaattac
     4441 gacaatagtc catcaaatta cgacaactct gagagcaact acgataatag ttcatccaat
     4501 tacgacaata gtcgcaacgg aaatcgtagg cttatatata gcgcaaatgg gtctcgcact
     4561 ttcgccggct actacgtcat tgccaacaat gggacaacga acttcttttc cacatctggc
     4621 aaaaggatgt tctacacccc aaaagggggg cgcggcgtct atggcggcaa agatgggagc
     4681 ttctgcgggg cattggtcgt cataaatggc caattttcgc ttgccctgac agataacggc
     4741 ctgaagatca tgtatctaag caactagcct gctctctaat aaaatgttag gcctcaacat
     4801 ctagtcgcaa gctgagggga accactagtg tcatacgaac ctccaagaga cggttacaca
     4861 aacgggtaca ttgttgatgt catgtatgac aatcgcccaa gtaagtatcc agctgtgttc
     4921 agaacgtacg tccgaattcc agactatgtc gaactagata acgcggagga gctggccgac
     4981 gcaatcattc gagaggttga gttaaaggag gcatggctca caagggtctt ggggaactca
     5041 gccgatcctg acgcttctgt gggcaagtgg gaccggcgcc tagcgcagtg cggtggtatt
     5101 gatgagatgt caagtggggt gcaggcaaca tacttcagtc caaacggtca gctggtcggc
     5161 ttagtggcat acattgatgc cgaatggatg gatgaatagc tctgacgtta cgattcaggt
     5221 gagacaacca gatgggcatt gcgtacaagc tcagttgcca ccgatgtggc tacgagtctg
     5281 atcttcttta cctaggccaa ggtatggcga tgcttcctga gcaaatagtc ggaacgtgca
     5341 catgctgcga caatctaacg acgatttcta taaatgaaag ctacggagta tgctcacttt
     5401 gtggggctaa ggatcgtgtg atatttacaa gctatcagca tgaggcaagg ccaagaaatc
     5461 cctgctatct agagagaagt ttcaaatatc aatgcccaag atgccatgcc ttcagtatgg
     5521 agcctccgga tctaccggag atgctttggg actaatgctc cgctttgcct cgggtatccg
     5581 ttcgacctat gtttaagagg aaacgcacgt gtctgccgcc aaagctcttg cctatgcact
     5641 ttgtgacaag ttggaaagca aaaaagttga tgaagtcgta cgaaatcttg tttctagcgg
     5701 ctggaatatt agggaagtgg cctgggaagc ttcgtccttt gatcatgaaa tgccctactt
     5761 tgacacgggg cgggacttcg atattggatt tcctgacacg ctgtcatcca agattgagtt
     5821 tttgaccgcg aatggatcaa tcgtccaagc acgtgctcgc ctgcacttca agcaggctct
     5881 aatttttgcc aaggcgtcca aacatgtcgc cgcgctcaag aactcattgg attactacta
     5941 tggatcgtct gtaatccccc ctcaaaacca cggaggctat ttgtagaaaa ttccattaat
     6001 atgaactcaa ggtgttccct acggacgaat cagcgatgaa ggtggtgtac ctggctatcc
     6061 aggcggcgac caagaaatgg acgatgccga tccgcaactg gaagccggcc atgaaccgtt
     6121 ttatgatcga atttggtgac cgtttaaatg gccaccttta actgaccggc aaaagcactt
     6181 acacaaaagg gtttacaggc tctttcagtc attcctttaa tgcgtaaatt gctctctaac
     6241 cactctctca gcccaccctt ccatatcctc tctcgatact tgcagctccc ccaacccctt
     6301 tggatgattc acccctctat gcccgtcttg tccatataat tgatcaaaca aactatttgg
     6361 ccaattcaat gagctcttca ccactccacg ccgtatcttt tcaaaatcat tccgccatgt
     6421 ttcgctatca acgccactca acactttggt agaaagcatt ttcaccccat ccgatgcatc
     6481 cacctctagc aatacaaatt cactgccatt acgttgcacc ccaacggctt taatcactct
     6541 tggtgagcca tctttacaca gatgtaatcg gctacgccca acttttggca aaaccaaggt
     6601 ttcttcaaaa agcacccgac atgcaaattt agtttttaga attgaaagta gctcatcaaa
     6661 agcagcaaat cgattagcaa aaatagagtt gtaattggtt gcatcctgct tcccacccac
     6721 atctgccgct gctaggacac cacctaagtg tggctcatca gtactaacca aattactatt
     6781 ttcacttgtt gttgcttctt ctttttctaa aatagtttgg ctactttttc ttgccctgcg
     6841 agatttttca attcgactag gtctactaaa acttatccat gtcggctcag cctctatgac
     6901 tcgtgtgtct gtgtctatat tggctgtttc ctcatcgtcc aactgtagat gctcatcatc
     6961 aacaactgac tctgttgaaa ccgctatgtg ctgcgtacta ccatcacctg cctccttttc
     7021 ctgaaaagag gcatggctaa tagctgttgt gctaggaagc atagcgttga tttctaaacc
     7081 tactatttcc tcaactaaat aatccttatc ctcgttagaa gaacgtcctt ttacatgtaa
     7141 tttccaaccc tgcatgggcg gagggtcaaa gctaaagcac cagctttcaa cgccgttctt
     7201 aatttctcta ttttgttgat agtgcctaaa aatactttca tacgaatcca taacatcttg
     7261 atccgaaaac aaccaaacca aaagctgcac tacggccgac tgctctaacg cccctttagg
     7321 aaacgatgaa ctgggtaaga tccttatctc taaatgatct cgctcaacct catactgaac
     7381 gtcgaactct tgctgtaaag cggtactgct caaacagctt cgacagaaat aggagttaat
     7441 taaaaataat gaccgagcta gctctaactg tgggatgtga taacgagtct tgctatatgg
     7501 tgtttcagct tcgtaaataa atgaactctg cgctccatcc ttgttgcgta cggaagcaaa
     7561 ggacgagaga ttaggaaaat cgattatttt ggctcgttga agatccgatg cttcaaactc
     7621 aatcacacga tccgccttat ttatttgctt tgttgtactg ttaaccacct tagctcgact
     7681 taataaaggc aaatgagtaa atcgagtcca tttccgttct tgcattggat taaaccaaac
     7741 aaaaatacgc cactccttat gacccgagtt acggaataaa tgaccaatat gtacaacctg
     7801 cacattgtca ttaaatgtag ctagcctaac cactcactct tccccataaa ccatttccaa
     7861 gaatctttgt gcttcctcag ttatccgctc tttagataac gttgcacttc ttaataatcg
     7921 ccagcgccta agctcaacat cttcctgttt aagcttaata aaagcttggc taatccgtct
     7981 aatttgataa tcttccacac tctctgagta acgctttaag caaagcgcta ccaaaggcag
     8041 tttctgtaga ttttttgcaa gagaggttcc gttaggagtt tgctttaaca gccagctcga
     8101 tgtcgctctt gggtgatcaa ggctactatc tagacgcttt atgattctta atagttgtcg
     8161 tacagcaatt cgatctcttt ggttccaatc aactctaggg gcgggtgcca gacgctcttg
     8221 ttgatgctgt tgattccagt gaactagcca atccctgtca tgtcggtaaa gccaagcgta
     8281 tagcacccca ccctctaaag actgtcttgc cgccttaatt ccttggtatt tatgcactag
     8341 ttgctgccag tctttatgct taacagataa atcttcagag ttaggttgca cagactggct
     8401 aacaggtctt gtcgttatag agtgctcagt aagagcactt gcctgctgta gcgcttctat
     8461 aaccgttagt tttggcaata aggcttgcca cacaatacta tgctgtaaat aactaaaggc
     8521 ttttctatgc ttacggaata tacttttcag ccaacacgtg tccttgttct ctgccaactt
     8581 taaatccagt ttctctagtg cctcatcact aaaagtctgc ctcactctct ccgccaccaa
     8641 gtcatgacga atgtgcttgc ttttggttag ccctagatcc tgcgctaagc gctgataaaa
     8701 cagcgtccac tgctcaaggc ttggggaaag ctcttgcgct cgtggagcat ctaacagagg
     8761 ggctatataa gcagctagtg ctgttaattg agatagggag tctttggggt agtctgaaag
     8821 cagctcagta tgacccaaag cccaaaattg atgtcggtga tcatctacag ctctatcaaa
     8881 gaagactaaa gcaccgtgtt ttggacaata tggcaaagcg ggcaaatacc aatctcgttg
     8941 ccaaaaggct tccccatacc tatttagctg aagagcaacg caatcagggc agtatctaaa
     9001 gcggttatcg ctcttaactc tagaagcagc gactcctagc attaaatgca ccgcaccttg
     9061 cgcttggtac tccattaacc gaatagcttc gtctcggcgc tccttgccta caaacggagc
     9121 atataaaggg aataaggtat gctcataaat aagctgctga acagcgtaac gtcctgtttg
     9181 atgtagatgt cttgctatca cacctaaatg cgagggcaga cctaaggtag cgaccacctt
     9241 gcggttgcca tacacctcat ccaacagctg cttaggacta acaatccctt gataaacgcc
     9301 tgcccgtgca atagtgctat aaatcagctc attcgagtac ggaacaggaa agtttctcat
     9361 ggctaacctg cttgtttaaa taagctcgcc atatccacta ttaccccttt cccttttaac
     9421 cgttcatgca tggttttttc aggttggcgt tgtgaataga tataacgtaa atccgtatca
     9481 ggcaagctat cccagtcgct gggcttgact acctttatag ccgaaacctt tttactcttg
     9541 gagggctttt ctagttctga cactaccgtt tcgccttcca tcaaccactg caaaacaaga
     9601 ggcagtaact tttgtcttgt catcgttgga ttctggctaa acgctttttt aatagtggga
     9661 attaacaggc ttgaatcgta atcctctttc agcatcagat ataaatgacg ctgatcttcg
     9721 gtatctaact cttgaagggc tttttcttct ggtgtttgtt cttgtatcgc tgcgatatct
     9781 agctgaagtt ggattaaccg tttatcaatc tcgggaacga ctagatcaga ataacgagca
     9841 atgcgttctg ggatacccga gcgtaatgcc tctagcatgg ggtgcacagg ctttaactca
     9901 tcttgataca cttgccgcaa taaaccagcg gtaatacgct cattgcctaa agctagcgca
     9961 cggagctgag cgagtacaaa aagttttact acaatgtcca tcactccttg gcttagctca
    10021 taccacacat cacggacctc atccgataac agcgcatctt tgcgttgtaa aagctgtaat
    10081 tgccaaagat tatccgtaaa agcgatccac tcttgattgg gctttccacg ttgcgtttgt
    10141 tgtataggat cccagaatat agctccaaac cctgcccctc tacgtgcaga ccgcaaatca
    10201 gcctcaaaaa tctctcgtgc tttaggggta ccaatcaaca tcactggtac gccaataata
    10261 ttcaccatcg tcacaaaaaa gttcagcatc tcttgagatc cacccgaacg agagcggctt
    10321 aaatgctgaa tttcatcaat aaccaacaac cctaaagcat gtgcattggc tatttgcgac
    10381 atcaaagcca acatggtttc tataccatga cgttttaagc cataacgacg ctcatagttc
    10441 gagcccaagg ctcgatccaa cgctctgaaa aaattcaagc agatttcttt tagcgaacca
    10501 ttatgcgagc agtctatttt caaatacacc acctgctcta cattgagttc acgatggtaa
    10561 atcacctgag gatacgtggc tagaatacga tgaagagagg tcgtcttccc actaccagaa
    10621 caaccaatta acaataagct ttgtgccgta gatcgtgcct cctcaaagcg aaatgtctcc
    10681 aactctcccg tttgaacacg ctcataacca ttttgtaaat gcttttgtaa atctcctgtt
    10741 ttaggatttc tgcctacgta gccacctcga atcatgaccg aaatacgctc acttagtagc
    10801 aaatgcgtac ctaatggctg aaaatagtca tctggaatac gacaaatggt atgagctctg
    10861 ataacacggg acttttgcaa gtcagaggaa gtaagctgta aagaggattt cagtgatgca
    10921 gcactattca ctgactcttg taatggtggt aaggcctcga taaaaggatt atcacgataa
    10981 gcctctaccc ccgtatcacg ataaactgct tgaatccggg tagcactcat gactcatcct
    11041 tttctggtgg atcctgaaat aattcaggca cgtatgtggg taggctgtaa tcttcttgat
    11101 catccgcttc cactgcgttg aaaggaataa ctttagcctc atcacctgaa gagcttggct
    11161 tcaaatgctc cgcacgtttt ttacgctccg aggtcacggc ttctttttta ttagttttaa
    11221 tctgcttaat gcgtgttgat ttgggctcag tagtactggg cgttaactta ttcgctttct
    11281 gaatggtttg ctgaataaac gcctcaagct ccctgcgttt agttaactca tcctgcttcg
    11341 cattggcttt attgtgtttt tcttgtgctt gtatatccca aacctcccaa aatgagagac
    11401 ctttaaactg ccgactacgt tccgtcagat tacagcgcca aaatacacgg ctgccaactt
    11461 gcggaaacaa ataaatcgta tcaaccagca ctgggtcata agccgcttct aaatgttgag
    11521 gtctagctat atcagtgctc cgctgcaacc aaccctcacg cagaatctct gaccccgagt
    11581 aatacaaacc ccacaaatta acgccaaatg aagaaataga gacctttcgg cgaggcagta
    11641 acgctactcg caactgctct tgctccacag cccttaaact acctgtacga tgctgcatac
    11701 cccattgcca tagctggaca ggaatagacg gtaaatctgt aggaaaatca gcatctcgat
    11761 cgtatttatc catcaccaga tggttatttc tgaataagat cgtacgcaaa ataatttgtg
    11821 tgaactcaaa taccgacaga gatgcatcta acctatagtc tgtttcacca tggcttttga
    11881 tccgactgcc ctctacaatg ccaggtgcaa aggacttaaa ctcggcttgt agtgttctaa
    11941 aagtgctttc cactatgcct ttagcatcgc cacgtctagg tggagcactt tccactcgca
    12001 cattaaaact agaaactaag gcttcgacct gatgactcat taattcgcca cggtccgcta
    12061 gcaacacatc tggcaaacct acacacggcc agtctgagct actaatctca atatcatgct
    12121 gggcacaaat ggccgttttg tcagagcaag catttacaaa agcctgcatc gccaccacat
    12181 aagacggatt ttcaaagccg atataaaagc ccgtgatcat ccgactaaac acatcaatca
    12241 caatgtaaag cgttggtctt cctatgattt tttggcgatc atgatgatcc actaaataaa
    12301 tatcagcaat cgtggcatca atctcataac gactcccagg gcctaacgcc tgagaagtgg
    12361 ctgtactact taagggtcgt acgtcttttt tatatacccc tgctttaact ctagacttta
    12421 agcgctgagc tttagggtat tctcgatcat aaaaataacg aaactgacgt agtgttgggt
    12481 aatcctcttg gggaatgcga ggaaaatact gagcaaacaa gtccacaaat cgtctatagg
    12541 caacggtggt ctttgtacct ttttgattta acaggtgctt ttctatggtc aacctaaaaa
    12601 ggcgttcaat ctcgggcgtt accttggttc cttcaccctt accatattct ctggctcggc
    12661 caatctttgc tgttcctgtc gctgaacgtc tttcccctgg tgcaccgctg tttttgtagt
    12721 caggaattaa tgcattaggc gtttgaccac gctgccagta acggcgtaac aacttataaa
    12781 ctgtagcctt agtaacctta tgttcttgga ccacatgctc aacgagttcg cttctgactt
    12841 tagggtcgaa acgatcctta ctattaataa taggaagaat ttttcgataa tcctcctcgc
    12901 gcttctggaa gctgacagaa tctacagacg gctcttctaa atcaagatgt acataagggt
    12961 catcagttct aactaagcgg ccttcatcta aatactgcat tagcaacaac tcagccctag
    13021 cttgtggaac tcctttatca gcgcttattt gcatccagac aacttggcca tcctctatag
    13081 ccaaaatgcg atacggatca ttatcaaata gcacaacctc attaatttgc cacatagcgc
    13141 aactcctcca tattcactac ttggctaata cagagatctg cacacttatt tgccctgaaa
    13201 gacttataaa tattgaactt aataaaacca tttgcggtta aggctcgtat ctcactcaat
    13261 gttttgccta actccaaatc ataagcaata tcaacctgct tacagacatt gataatgttt
    13321 tcatctcctt tttcttgcag gatatgggcc aatggggata gttgtgctaa aagctccgca
    13381 gaaacttctt ctgttttcac tgaataaagc cattcaatat tttcttttac tacgggattt
    13441 atttctttat cagtaaaaat gaaccaagga atttgctttt gctgccaata gcgacgctct
    13501 agttctagtt tttctaaggt acgctcgtct tgtaaggctg ctgcaggttt gacttgaata
    13561 gcaaactgct caaaaggacc atctttgcag tccactaaaa aatcagtaga cataacctga
    13621 tctacaccac gaataacagg atgcttaata ccactatcta ttgcaatctg cctggtatca
    13681 ctaggtaata aggggaactg ctcgcgtata tctagcacgc tgctctccca ctcaagactg
    13741 agaaaaacag caagctctaa gtcagatagc aaatgatgga ctcgtcccgt cttatgagaa
    13801 taaatacggt gggaacgacc tgaagaagga acttcttgta ctgttagcca tggaatatag
    13861 tctttaccat gcccttggcc acgcccctct ttaatacgac gggcaatttg cacttcagaa
    13921 aatgaagagt ttgctttagc cataacaaaa gtccagtatg ctttttcaca gcataactgg
    13981 actgatttca gtttacaact attctgtcta gtttaagact ttattgtcat agtttagatc
    14041 tattttgttc agtttaagac tttattgtcc gcccacaagc ccttttttat ctatgatagt
    14101 gattactcaa ccgtaaccga ttttgccaag ttacgcggct ggtcaacgtc ggtgcctttg
    14161 atcagcgcga catggtaagc cagcagctgc agcggaacgg tgtagaagat cggtgcaatc
    14221 acctcttcca catgcggcat ctcgatgatg tgcatgttat cgctacttac aaaacccgca
    14281 tcctgatcgg cgaagacata caactgaccg ccacgcgcgc gaacttcttc aatgttggat
    14341 ttcagttttt ccaacagttc gttgttcggt gcaacgacga taaccggcat atccgcgtca
    14401 atcagcgcca gcgggccgtg tttcagctcg ccagcagcgt aggcttcagc gtgaatgtag
    14461 gagatctctt tcagcttcaa tgcgccttcc agtgcgattg ggtactgatc gccacggccc
    14521 aggaacagtg cgtgatgttt gtcagagaaa tcttctgcca gagcttcaat gcgtttgtcc
    14581 tgagatagca tctgctcaat acggctcggc agcgcctgca gaccatgcac aatgtcatgt
    14641 tcaatggagg catccagacc tttcaggcga gacagcttcg ccaccagcat caacagcaca
    14701 gttaactgag tggtgaatgc tttagtggac gccacgccga tttccgtacc cgcgttggtc
    14761 atcagcgcca gatcggattc gcgcaccaga gaagaacccg gaacgttaca gattgccagc
    14821 gaaccaaggt aacccagctc tttcgacaga cgcaggcccg ccagggtatc cgcggtttcg
    14881 ccagactgtg acaaggtgat catcaggctg ttacgacgca cggcagattt acgatagcgg
    14941 aattcagagg cgatttcgac gtcgcacgga atacctgcca gcgattcaaa ccagtagcgg
    15001 gaaaccatac cggagttata agaagtacca caggcgagga tctgaatatg ctcaaccttc
    15061 gacagcagtt cgtcggcgtt cggtcccagc tcgcttaaat caacctgacc gtggctgatg
    15121 cgcccagtaa gggtgttttt gatcgcgttc ggctgttcgt agatctcttt ctgcatgtag
    15181 tgacggtaaa tacctttatc gcccgcgtca tattgcagat tggattcgat atcctgacgt
    15241 tttacttccg cgccagtttt atcgaagatg tttaccgaac ggcgagtaat ttccgcaata
    15301 tcgccctctt caaggaagat aaagcgacgg gtcaccggca gcagcgccag ctggtcagaa
    15361 gcgataaagt tttcgcccat acccaggcca atcaccagcg gactaccaga acgtgccgcc
    15421 agcagggtat ccgggtgacg ggagtccatg atcactgtac cgtacgcacc gcgcagctgc
    15481 gggatagcac gcagaacagc ctcacgcaga gtcccgcctt gttttagctc ccagttcacc
    15541 agatgggcaa tcacttcggt gtcggtttca gaaacgaagg tatagccacg cgcttttaac
    15601 tcttcacgca gcggttcatg gttttcgatg atgccgttat gcaccaccat aatgtgttca
    15661 gaaacatgcg gatgcgcgtt agcttctgaa ggttcaccgt gggtcgccca gcgagtgtga
    15721 gcaataccgg tgccgccatg cagaggatgt tcttccgctg cctgagccag catctggact
    15781 ttaccgaggc gacgcaggcg ggtcatatga ccttccgcat caacaacggc cagaccagca
    15841 gagtcatatc cgcggtattc cagacgacgt aaaccttcaa gaaggatttc tgctacatca
    15901 cgttgcgcga tcgcgccaac aattccacac atagtttttg attccgattt atatcgttgt
    15961 cggtcaacct gtatgcccgt tttttcgggc gccccgagcc ttgtagagag tggggttatt
    16021 tttatagtta ctgcttgtgg gagggagatt atgttatctc ctcatcccag atgaccggat
    16081 tacccggcca gaattacttt ttctttaccg gacgacgcca gccttctttc tgagtctgcg
    16141 gcacacggct gatagctaat gcattttcgc cgacattacg cgtcacagtt gtacccgcag
    16201 caatggtcgc gcctttgcct actgttaccg gggccaccag ctgagtgtcg gaaccgacaa
    16261 acacatcgtc gccgataatg gtcttaaatt tattcgcacc atcgtagttg caggtaatgg
    16321 ttcccgcgcc gatgttaacg ttatcgccaa tttccgcatc gcccaggtaa gtcagatgac
    16381 cagctttcga gcctttaccc agacgcgctt ttttcatctc aacaaagtta ccgacgtgtg
    16441 caccttccag caactcagca ccaggacgca gacgggcaaa cgggccaata gtacaggccg
    16501 ctgccagatt cacgtcttcc acaacggtat acggactgat ttcgcaatca tcgccaatca
    16561 cgctgttttt aatcacgcaa ccggtgccga ttttcacgcg atgaccgaga gtcacgttgc
    16621 cctcgatgat aacgttagta tcaatttcaa catcgcgccc gtgagtaagc gtaccgcgca
    16681 gatcaaaacg cgccggatcg cgcagcataa cgcctgctaa cagcagtttt tcagcctgtt
    16741 cggactggta aacgcgctcc agacgggaga gttgcaggcg gttattcaca ccttctactt
    16801 cgcttaaacg ttgcggatga acggcgacga tttcacgccc ttcctgatac gccagcgcaa
    16861 taatgtcggt gatgtagtat tcgccctgag cattattgtt ggtcagcttc gccagccagc
    16921 gtttcatatc tgcgccgtta gagatcagaa tgccggtgtt gatctcctga atctgacgct
    16981 gctcgtcggt ggcatctttg tgctcaacaa tgccggtaac tttgccattt tcacgggtga
    17041 tacgtccata accggtcgga tcatccagtt tcaccgtcag cagaccaatg ccaccctgcg
    17101 gtttagcatc acgcaggcgc tggagtgttt cgacagagat cagcggcacg tcgccgtaga
    17161 gcattaaaat gtcttcatca tcggcaaaga aaggtgcggc ctgctgcatt gcatgacccg
    17221 tacccagctg ctctgcctga agcacccagt taaggttgtc gtctttcagc gcctgtttaa
    17281 gcagatcgcc gccgtgaccg tacaccaggt gaacgtgcgc tgcgcctaat tcattcgcag
    17341 catcaatgac atgctgaacc atcgctttcc cggcaagggt atgcagcact ttcggaagat
    17401 cggaatacat gcgcgtgcct ttgcctgcgg caaggatcac tacgctcata gcattattca
    17461 acatacgcgt cctgactgta atttgagaac gaatttaaac cgcttcacct tgaaaaaact
    17521 acattttttt catcgtgaaa tggacagagg ataaattgtt caataacgga ttatccccgc
    17581 tgacgaaagt gccattttcg accatcgtca cgccttttgt ctgcagaaaa ttaaggcagt
    17641 accttcattt aagcgtcagg tggatgtttt tgctcttatt tcgatcaatg aataaacggg
    17701 aaaacagggg tgttttatat cagcaggatc tatgtgaacg ctcttcagga cggatcacgc
    17761 gtaaaaaaaa accagcctgt ttccagactg gcttttgtgc ttttcaagcc ggtgttacat
    17821 cgcttttttg gtcaactcga taacgcgcag ctgcgcgatc gctttggcca gttccgcaga
    17881 cgcctgagcg taatctacgt cgccgtgaga gctgctaatg tgctcttcag ccttacgttt
    17941 cgcttccatg gctcgcgctt cgtcgagatc ctggccgcga attgcggtgt cggccagaac
    18001 ggtcacgttg ccagactgca cttcaagaat gccgccagac agatagataa actcttcgtg
    18061 accgtgctgt ttcacgatgc gaatcatacc aggcttaatg gcggtgagca gcggtgcgtg
    18121 gccagggtag atccccagtt caccttcgct acccgttacc tggattttct cgaccagacc
    18181 agagaacatt tgttgctctg cgctgacgac gtccaggtgg taagtcattg ccatatcacc
    18241 ctccgattaa ggcgttaaag ttttttggct ttttccacag cttcttcgat ggaaccgacc
    18301 atgtagaacg cctgctccgg caggtgatcg tattcgcctt ccatgatgcc tttaaagcca
    18361 cggatggtgt ctttcaggga gacgtattta cccggagaac cggtgaatac ttctgccacg
    18421 aagaacggct gggacaggaa gcgctggatc ttacgagcac gcgctaccac cagtttgtct
    18481 tcttcagaca gttcatccat acccaggatg gcgatgatgt ctttcagttc ctgataacgt
    18541 tgcaggatgg actgaacgcc acgcgcggtg tcgtagtgtt cctgaccaac caccagcggg
    18601 tccagctgac ggctggtgga gtccagcggg tcaacggccg ggtagatacc cagagacgcg
    18661 atctgacggc tcagtaccac ggttgcgtca aggtgcgcaa aggtggttgc cggagacggg
    18721 tcagtcaagt catccgcagg tacgtatacc gcctgtacgg aggtgataga accagttttg
    18781 gtggaggtga tacgttcctg cagaacgccc atctcttccg ccagggtcgg ctgataacct
    18841 accgctgaag gcatacggcc cagcagtgcg gatacttccg taccggccag ggtgtaacga
    18901 tagatgttgt caacgaacag cagaacgtca cgaccttcgt cacggaattt ctcagccatg
    18961 gtcagaccgg tcagagcaac gcgcagacgg tttcccggcg gctcgttcat ctggccatac
    19021 accagggata ctttgtcgat aacgttggag tcggtcattt cgtggtagaa gtcgttaccc
    19081 tcacgagtac gttcacctac gcccgcaaac acagagtaac cggagtgctc gatcgcgatg
    19141 ttacgaatga gctccatcat gtttacggtt ttacctacac ccgcaccacc gaacagacca
    19201 actttaccgc ccttagcgaa cggacacatc aggtcgataa ctttgatacc ggtttccagc
    19261 agttcctgag agtttgacag ctcttcgtag gaaggtgctg cgcggtgaat cgcccaacgc
    19321 tcttcttcac cgatctcgcc tttcatgtcg accggttcac ccagtacgtt catgatacgg
    19381 cccagagtcg ctttacctac cgggacttcg atcgggtgtt cgaggtcttt tacatccaga
    19441 ccgcgacgca gaccgtcgga ggaacccatt gcgatggtac gcacgatacc gccgccgagc
    19501 tgctgctgaa cttccagcac cagacgctca ttaccatttt gcacctcaag agcatcgtac
    19561 acgcgcggta cggcatcctg agggaattcg acgtcaacta cggcgccgat tacctggaca
    19621 atctttccag tagccatctt aaatcctcta cgaaataacc tgtttaaacc gcggcggccc
    19681 ccgagacgat ctcggtgagt tcctgagtaa tgctggcctg acgagctttg ttgtatacca
    19741 actgcagctc tttaatcagg ctgccgccat tgtcggtcgc ggctttcatc gccaccatac
    19801 gggcggcctg ctcgctggcc aggttttcaa ccacgccctg ataaacctga gattcgacat
    19861 aacgacgcag cagggtatcc agcaacgcct tcggatcggg ttcgtacagg taatcccagg
    19921 atttatgttt cagatcatca tcatctgatg ccggtaacgg cagcagctgg ctgatggtcg
    19981 gaacctgaga catggtgtta ataaatttgt tgctgacaat gtaaagcttg tccagacggc
    20041 cttcgtcgta ggcctgcaac atcactttta ccggaccgat cagttcggac agggaagggt
    20101 tatcccccat gccggtgacc tgggcaacaa cattgccgcc cacggagttg aagaacgaca
    20161 cgcctttcga gccgatcatt gcgaggtcgc attgaacgcc tttgtcggtc caggtcttca
    20221 tttccgccag cagttttttg aacaggttaa tgttcaaacc accgcacaaa ccacggtcgg
    20281 tcgacaccac caggtagccc acgcgtttaa cgtcgcggtc ttccaggtaa aggtgcttat
    20341 attccagatt accatgtgca aggtgaccaa tcactttgcg catggtttct gcataaggac
    20401 ggctggccgc catgcgatcc tgcgatttac gcattttgga agcggcgacc atctccatcg
    20461 ctttagtgat cttttgcgtg ttctggacgc ttgcgatctt actacgtatc tcttttgcgc
    20521 cggccatgag cttctcctca atgccttgcg gcctgcccta aggcaagccg ccagacgtta
    20581 ccaggattgg gttgctttga aggaatcgag gatgcctttc agtttgcctt cgatttcgtc
    20641 gttgtagcca ccggtctggt tgatctcttg catcaacgga gcgtgatcac ggtcgacgta
    20701 agccagcaga gcggcttcga agctgccaat tttcgacagt tcaacatccg ccaggtaacc
    20761 acgttctgct gcgaacagaa ccagagactg ctgcgcaacg gacatcggcg catactgttt
    20821 ctgtttcagc agttcggtca ctttctgacc gtggtcaagc tgcttacgtg ttgcatcgtc
    20881 aaggtcggat gcaaactgag agaacgctgc cagttcacga tactgtgcca gagcggtacg
    20941 gataccaccg gacagttttt tcatgatctt ggtctgtgct gcaccaccaa cacgggatac
    21001 ggaaataccc gggttaaccg caggacgaat accggcgttg aacaggttgg tttccaggaa
    21061 gatctgacca tcggtaatgg agattacgtt ggtcggaacg aacgcagaaa cgtcacccgc
    21121 ctgagtttcg ataatcggca gtgcggtcag agaaccggtt ttccctttca cttcaccttt
    21181 ggtgaaggct tcaacgtatt cggcgttaac acgtgcagca cgctccagca gacgagagtg
    21241 gaggtagaaa acgtcgcccg ggaatgcttc acgtcctggc ggacgacgga gcagcaggga
    21301 gatctgacgg taagcaacag cctgtttaga caggtcatcg taaatgatca gcgcatcttc
    21361 accgcggtca cggaagtatt cgcccattgc gcaaccggca tacggtgcca ggtattgcag
    21421 tgcagcggat tcagacgcgg ttgctaccac aacgatggtg ttagccagtg cgccgtgctc
    21481 ttccagttta cgtaccacgt tagaaatggt ggacgctttc tggccgatag cgacatagat
    21541 acatttgata ccggaatcgc gctggttgat gatggcatcg atagccagtg cggttttacc
    21601 tgtctgacgg tcaccgatga tcaattcacg ctgaccacga ccgattggga tcatggagtc
    21661 aacggcttta taaccggtct gtaccggctg atctacggac tgacgttcga taacgcccgg
    21721 agcgattgct tctacagcag agaagccgtc gtgatccagc ggacctttac cgtcgattgg
    21781 tgcacccaga gtgttaacca cacggcccag caggccacgg ccaaccggaa cttccaggat
    21841 acggccagta cacttaactt tcatgccttc ggcaaggtca gcgtacggac ccataacaac
    21901 cgcacctaca gagtcgcgct cgaggttcag tgcgatagcg taacggttac ccggcaggga
    21961 gatcatttca ccctgcatac aatcggccag gccgtgaatg cggataacac cgtcacttac
    22021 agaaacaata gtaccttcgt tgtgagcttc actcacaaca ttgaactgag caatgcgctg
    22081 cttgatcagt tcgctgattt cggtggaatt cagttgcatg ctccagtccc cttaagactg
    22141 caagacgtct gcaaggcgct caagacgacc gcgtacgctg ccatcaatga ccatatcacc
    22201 cgctcggatg ataacgcctg ccattacaga cttatcgatt ttgcaattca gcttaacttt
    22261 gcgtgacaga cgtttttcca tcgcagcaga aattttcgcg agctgttgtt cactcagtgc
    22321 ggcagcggaa atgacgtcta cctcagcggt agcctcactc acggcacgaa ggtgaataaa
    22381 ctgctccaga acatccggga gcgcgttaag acgaccattt tcagccatta cccgaatcag
    22441 gttctgaccg ttttcgtcca gttgctcacc acaaactgcg ataaacgact cggcgagcgt
    22501 ttctggcgca agcgcgccag agagaagctc tgccatttgt tcgtttttgg ttacctcggc
    22561 ggcaaacgcc agcatgtcct gccagcgttc tacactttgg tgttcgacgg caaagtcaaa
    22621 agctgctttg gcgtaggggc gagctaccgt aataaattca gacatcagcc cctccctcct
    22681 tacagttcag cgacaagttt atccacgatg tcgctgttag cagcttcatc cacggaacgt
    22741 tcgatgatct tctcggcgcc agcaacagcc aggatagcaa cttgcttacg cagctcttca
    22801 cgggcacgtt tacgctcggc ttcaatttct gcctgcgcct gggccacgat tttagtacgt
    22861 tcctgttctg cctcagcttt cgcttcgtcc agaatctgcg agcggcgttt gttcgcctgc
    22921 tcgatgatta cctgggcttc cgctttcgct tttttcagct ggtcggtcgc gctggccttt
    22981 gcaaggtcaa ggtccttatg tgctcgttct gcggaagcaa ggccgtcagc aatttctttt
    23041 tgacgttttt cgatggctgc cattaatggc ggccatacgt acttcatgca gaacagaacg
    23101 aacaggacaa acgcgatggc ctggccgagg attgttgcgt taagattcac agcacaatgc
    23161 ctctatttag ttaacgttct gatattgctc tttaaataaa agcaacgctt actacgcgac
    23221 agcgaacatc acgtacagac ccagacctac agcgatcatc gggatagcat ccaccagacc
    23281 cataacgata aagaactgag tacgcagcag aggaatcaga tcaggttgac gcgctgcgcc
    23341 ttccaagaat ttacccccga ggatgccgat accgatcgca gcaccgattg ccgccagacc
    23401 catcatcaca gcggcagcca tgtacagcag atccatattc aggttttcca tgacagtctc
    23461 cagtttgttt cagttaaaac gtagtagtgt tggtaaatta atgttcttca gacgccatcg
    23521 acagatagac gatcgtcaga accatgaaga tgaaggcttg cagcgtaatg atcaggatgt
    23581 ggaaaatggc ccacggcaca ttcaggatcc actgtgacca ccacggcaac agaccagcaa
    23641 tcagaatgaa aatcagctca ccggcataca tgttaccgaa cagtcgcaaa ccgagtgaaa
    23701 ctggtttgga cagcaggctt accccttcaa ggattaagtt gacaggaatg aacgcccagt
    23761 gattgaacgg ctgcagcgtc aactctttcg tgaagccgcc gatgcctttc attttgatgc
    23821 tgtagaacag aatcaggata aatacgccca atgccataga cagcgttacg ttcacgtccg
    23881 cagacggaac cacacgcagt gcaggcagac ccagtacatg ttcagcaatg tacggcagca
    23941 ggtcgatagg cagtaaatcc atcaggttca tcaggaatac ccagacgaag atcgtcaggg
    24001 ccagcggagc aatcagcttg cttttgccat ggtacatgtc tttcacgcta ccattaacaa
    24061 agccgatcac cagctcaatc gcggtctgaa acttacctgg cacaccgctg gtcgcctttt
    24121 tggctacgct acggaataaa accaggaaca acagacccag caccaccgag aagaacatgg
    24181 agtcaatatt gattgtccag aaggtggctg gggggttttg tggatccacc agcgagaatg
    24241 tacgcaggtc cagctgaagg ttattcaggt ggtgtcctat gtaatcctgc ggcgtcatat
    24301 tttctgaagc catgatgcct tttacccttt gttgttaatt acagccggtg ccagtatctg
    24361 aaccaccagc accaaaaccc acgtaacgat cagcggcaag aataccgcct ttaaaaccgc
    24421 caacgccacc accagtaaca ccaacatcgc cagaactttg aaagcttcgc caaatgcgaa
    24481 tgtccaggcc acccggcctt tcgctggtgt atgcgcctgg tgacgccagg caaatatcat
    24541 aaacaaaacg ttaggcagaa agactgccag gcccccgctt attgcagaga cgccccagaa
    24601 ggggtctttg aggctgaaca gcaatccact tgctatcacc accagtaact gaacgagcag
    24661 aagcttccga gcaacgtttc gactcacgag cgacacagac atcacgtttt ttactcctgc
    24721 tcccttcgag gtatgccgcg tgtcgtataa aactttcttt aaggcttaga gtcaagcatc
    24781 aaaaagcggt caaattatac ggcgcgcccc cgtgatttca aacaataagt agccaaaagg
    24841 tgaataaatg tttaaatatt tttccagtgc atacaattgc gacttttcta ctaaccctgt
    24901 tcgatcatga aaaactgtaa ataacgcgta aacactggtg ataaagcgtg cttcagatca
    24961 catattgcgc atgttcgcgc acagcatatt tatttacttg gcaaatgatg cctttgcaag
    25021 tttatgatat ttcagtctaa aaacagatac tgttttaata aatgacattt acacaacaaa
    25081 aaccacccat tgacattttt aataatgttt tagcagccaa tgatggttct tagcgccgat
    25141 ttttagcaga ctgatatttt cactaatgac ttattttctg cttaccaaaa aaagccacgt
    25201 tatcttgttg atgcaaaaga gtgaacgtgg cgttaaatgt aaccagttat atcagtagaa
    25261 aacctggttg ttgttaacag tctaaccggt caatttttta tgattttttt gataaaaatt
    25321 aaattttatt tgctttaatc accaccagat gacgttcgcc atccagggct ggaacctgaa
    25381 gtttaaccac tgattcgacc tgatattctt cgggcaacaa agcgatttca tcttccggca
    25441 tttgcccttt cagcgcgtag aaacggcctt gctcaccagg aagatggtgg caccagctca
    25501 ccatatcgtt cagagaggca aaagcgcggc taattacgcc atcaaatggc ggctctgaag
    25561 gaaactcttc taccctgctc tgtacaggtt caatattctc cagtttaagc tcatgttgca
    25621 cctgacgaag gaaacgcacg cgtttaccaa ggctatccaa cagagtgaaa tgggcttcag
    25681 gacgcacgat agagagtgga atgcctggca gtcctggtcc ggtgccgaca tcgataaacc
    25741 gttcaccttg cagatacggt gccaccacaa tgctatcgag aatatggcgt accagcatct
    25801 cattaggatc gcggaccgaa gtcaggttgt acgctttgtt ccatttatgc agcatattca
    25861 cgtaggcaat aagctggttt ttctggtgat cggtaagcga aatacctgcg tctttcagca
    25921 gtaaggagag tttgttgagc acggtgatta cctgttcttg atgcgttgcc tggtaagcgg
    25981 gtgcttacca ggcattttta atgcgttatg cgctacgacg cagcataccc tgttttttca
    26041 gccacaccag cagaatggag atagccgcag gcgtgacgcc agaaatacgc gaagcttggc
    26101 cgatagaggc tggtttgtga tcgttaagtt tggcgatcac ttcgttagaa agaccggata
    26161 cctggcggta atccagtgtc gcgggtagca gggtgttctc gttacgcagc tgcttttcga
    26221 tctcatcttg ctggcgcgcg atataacctt cgtatttaac ctgaatctca acctgttccg
    26281 ccgcctgttc gtctgtcaac gcaggggcaa acggcgtcag cgtggttaat ttttcataag
    26341 tcatttccgg acgacgcagc agatcttcac cactggcttc acgggaaagc ggcgcagtca
    26401 ggtgagcatt cacttcggct gcagcttccg ccgacggggt tacccaggtc gatttcagac
    26461 gctgacgctc acgctcgata ttctcaagtt tctcgttaaa gcgcgcccaa cgttcgtcat
    26521 ccaccaggcc cagttcacga ccgatttcag tcaaacgcag atccgcatta tcttcgcgta
    26581 gcatcagacg atattctgcg cgcgaagtaa acatacgata cggttctttg gttcctaaag
    26641 tgcacaggtc atcaactagt acgccgagat acgcctgaga acgtgccgga gcccaacctt
    26701 ctttgtcagc agacagacgg gcagcgttaa gaccggccag caaaccttgc gcagcggctt
    26761 cttcgtaacc ggtagtgccg ttaatctgac cagcaaagaa cagcccctgg ataaacttgc
    26821 tctccagcgt cggtttcagg tcgcgaggat cgaagaagtc atactcaatg gcataacccg
    26881 gacgcacgat cttcgcgttt tccatcccct gcatagagcg gacgatttgc atctgcacat
    26941 cgaacggcag gctggtggag ataccgttcg gataaatttc attagaggtc agtccttccg
    27001 gttcaaggaa gatctgatgc tgatttctgt cggcgaagcg catgactttg tcttcgatcg
    27061 acgggcagta gcgtgggccg acaccttcga tcacccctgc atacattggg ctacgatcga
    27121 ggttactgcg gatcacatca tgggttttct cgttggtatg agtgatataa cacggcacct
    27181 gctggggatg ctgggacgca ttgcccataa acgagaatac cggcattggg ttatcgccat
    27241 gctgttgcgc cagcacacta aagtcgatag ttcgagcatc aatacgcggt ggtgtcccgg
    27301 ttttcagacg accaacgcgc agcggcagtt cacgcaaacg gcgagaaagc ggaatggacg
    27361 gcggatcacc agcacggcca ccgctgtaat tatccagacc gatatgaatt ttaccgtcga
    27421 ggaacgtccc aacggtgagc acgacggctt tggcacggaa cttcagtccc atttgggtaa
    27481 cagcaccgac cacgcgatcg ttttcgacaa taagatcttc aaccgcctgc tggaagatca
    27541 tcaggttcgg ttggttctcc agcgccgtac gtaccgcctg acggtagagc acacgatccg
    27601 cctgagctcg ggtagcgcga accgccggtc ctttgcttgc gtttagtatc ctaaactgga
    27661 tacccgcttg atcgatcgct ttcgccatca gaccgccgag tgcatccact tcttttacca
    27721 gatgtccctt cccaataccg ccgatcgccg ggttgcagct catctgcccc agagtgtcga
    27781 tattgtgtgt caaaagcaga gtctgttgac ccatacgcgc cgcggccatc gcggcctcgg
    27841 tgcctgcatg acccccgcca atgatgatga cgtcaaaagg atccggataa aacatggtga
    27901 ttgcctcgca taacgcggta tgaaaatgga ttgaagcccg ggccgtggat tctactcaac
    27961 tttgtcggct tgagaaagac ctgggatcct gggtattaaa aaggagatct atttatttag
    28021 agatctgttc tattgtgatc tcttattagg atcgcactgc cctgtggata acaaggatcc
    28081 ggcttttaag atcaacaacc tggaaaggat cattaactgt gaatgatcgg tgatcctgga
    28141 ccgtataagc tgggatcaga atgaggggtt atacacaact caaaaactga acaaccgttg
    28201 ttccttggat aactaccggt tgaaccaagc ttcctgacag agttatccac agtagaacgc
    28261 acgatctgta tacttatttg agtaaattaa tccacgatcc cagccattct tctgccggat
    28321 cttccggaat gtcgtgatca agaatgttga tcttcagtgt ttcgcctgtc tgttttgcac
    28381 cggaattttt gagttctgcc tcgagtttat cgatagcccc acaaaaggtg tcatattcac
    28441 gactaccaat accgattgcg ccaaagcgga ccgcagaaag atcgggcttc tgttcctgca
    28501 atgcttcata gaaaggagaa aggttgtccg gaatatctcc ggcaccgtgg gtggagctga
    28561 taatcagcca gatccccgag gcagataaat cttccaacag cggaccgtgc agcgtttcgg
    28621 tggtaaaacc cgcctcttcc agcttttcag ccaggtgttc tgctacatat tcggcaccgc
    28681 cgagggtgct gccgctgata agagtgatat ctgccataaa ccgccacctt tattaagagt
    28741 ggcgtattgt acgctgtgaa cgcgttggga tctacctgtg gaaaagtatg ggattaaaaa
    28801 agccgatcag ggcttgatag tacgcatgat cgggtgttgc aggacgatca atgtctcggt
    28861 ggactgaatt tcatcaattg tttggatctt gttgataagt acatgctgga gagcgtcgat
    28921 cgaacggcac attactttta taaagatgct gtagtggcct gttgtgtaat aggcttcagt
    28981 gacttcatca aggctttcca gctttgccag cgcggaaggg tagtctttgg cgctctttaa
    29041 tataatgccg ataaagcagc ctacgtcata accgagctgc ttcgggctga catcaatacg
    29101 cgccccggta atgatccccg cctgcttcat tttctctacc cgaacgtgaa tcgtccccgg
    29161 actgacgcca aattgtttcg ccagttcggc gtaagcggtg cgcgcattgc ccattaatgc
    29221 ttccaggatg ccacggtcca gattgtcgat cagataattt tccataggat tttcttatgc
    29281 agattgatga ttcattctat tttagccttc ttttttaatg aatcaaaagt gtgttaggct
    29341 ttttattgaa tgattattgc atgtgtgtcg gtttttgttg cttaatcata agcaacagga
    29401 cgcaggagta taaaaaatga aaaccgctta cattgccaaa caacgccaaa ttagcttcgt
    29461 gaaatctcac ttttctcgtc aactggaaga acgtctgggg ctgatcgaag tccaggcacc
    29521 gattcttagc cgtgtggggg atggcacgca ggataacttg tcgggctgtg aaaaagcggt
    29581 gcaggtaaaa gtgaaagctc tgcctgatgc ccagttcgaa gtgattcatt cactggcgaa
    29641 gtggaaacgt cagaccttag ggcaacacga cttcagcgcg ggcgaagggc tgtacacgca
    29701 catgaaagcc cttcgccccg atgaagaccg tctttctccg ttgcactcgg tctatgtaga
    29761 ccagtgggac tgggaacgcg taatgggcga cggtgagcgt caattctcga ctctgaaaag
    29821 cacggtagag gcgatctggg cgggaattaa agcaaccgaa gctgcggtta gcgaagagtt
    29881 tggcctggca ccgttcctgc cggatcagat ccacttcgta cacagccagg agttactgtc
    29941 tcgttatctg gatctcgatg ccaaagggcg tgagcgggcg atagcgaaag atcttggcgc
    30001 ggtattcctt gtcgggattg gcggcaagct gagcgatggt catcgccacg acgtgcgcgc
    30061 accggattat gatgactgga gcaccccgtc agagctgggt catgcgggtc tgaacggcga
    30121 tattctggtg tggaaccctg tactggaaga tgcgtttgag ctttcttcca tggggatccg
    30181 cgtggatgcc gacacgctga agcatcagct ggcgctgacc ggtgatgaag atcgtctgca
    30241 gctggaatgg catcaggcgc tgctgcgcgg tgaaatgccg cagaccatcg gcggcggtat
    30301 cggccagtct cgtttgacta tgctgctgct gcaactgccg catatcggcc aggttcagtg
    30361 tggagtatgg ccagctgctg ttcgcgagag cgtcccttct ctgctgtaat aatttatcgc
    30421 cgccagcgtc tgagcaggcg gcttcgcatc ccggtatcaa agcgccagat atgatcgaaa
    30481 atgcgcatga tgccgggttt gccgtgtgcc gacatcgcca cggcatgaaa gcgatgctga
    30541 tgtacccgct gcagctcttt cactttactc gtcacgtcgt caggcaaccg ctgagcgata
    30601 aaatcagaaa tcaccaccgc atcggcatca aaccattccc tgctttgcaa gcgttccata
    30661 atggcgcgaa aacaactggc aagatcggtg ccgccacgaa actgctggct taaaaaacgg
    30721 attgcttgtt cgatgccttg tgggcctgaa agctcataac ggacgatctc ggtggaaaat
    30781 agcataatat agcagcgccg gttttctgcg agagcaatgc gcatcaaggc caggcagaac
    30841 gctttcgcac actgttcatt aaagccgccc attgagccgg aagtatccac acagacaata
    30901 aacggcccgc gcggctgttc atcgtaatct ttatgtacca ccggacgttc gatcactttt
    30961 tcacgccacg actcaccgtg caggcgatag gtgagcaact gtttttccac cagccgacgg
    31021 taaaactcat actccagttc cgttatccct agtgtcgcca gttctggcgg caggagacgt
    31081 aaaatatcat cgctttgttg cagaccatca acctgctcag gaaccgtcgc cggttcgcgc
    31141 accatggtgc ggaaggtttc catctgcgca tcgttgcgcg gtattgattt ggcttcccga
    31201 gaacgcccca gctgctctgc caggcgtttc agttccggct gttcgttaag aaattcaccg
    31261 tatttcacaa tcaactgata gtcgccacgt ttaagctggc cggcgctcat atcccacaga
    31321 cgaccagctg cggtattgtt atctgcgaga atcggttcaa gttgtccgct cagcgtcatg
    31381 cgttcctgaa cttcacttaa cagttgttcg cgttcttctt ctaatagctg ttgatttaac
    31441 gtcgttgctt gcacgatcag acttaaacgc cagcgctgga gaaaaagcgt gtgtaacgct
    31501 gaagttattg tgctgttagc atcaaccaac tgccgggctt gttctgccca tggggaattc
    31561 agacgatgca gtaagtccag gatctgtggt agctgcacaa taaactgcgg cgtggagagg
    31621 agctggcttt gctgatagca catcacctct tcggtgagtt ctggcgggac tcgggcatct
    31681 ttcagccgac tgcgcagcgc ctcactccag cggggaacat catcagtgat tgctgccttc
    31741 agtcgtggga atttttcaaa gaagaccgcc agctgcggtg aggccagcag tgcgatgatc
    31801 atctcttcga tcaatccctc ttcgctgacg gccagcatca cattaagcgt atccagcgtt
    31861 agcattgttg tgcctggcga atctgtgcac cgacatcctg taggctggct tcaatgcgac
    31921 ctaaccagtc gccagggata aacagacatt tttgctgttc gctgaataaa gcgtgttgct
    31981 tacgccagtc gctttcaagc tcttccagtt gttgttttat ttcacctggc agaccttcag
    32041 ccgatgaacc gggaagtgcc agcgtactgc cttgtaaact tacatcgcgt acaacaagat
    32101 gttgggtgct atcaacttcc agattcagtt tctgggcaaa gccgataccg ttcagtttgc
    32161 cgcgaatttc accaccttta ctcagccact gttccagcgc gctacgctca aaggagatat
    32221 gaaccacttc catatcatgc agttttaacg gtttttgcag cagcagagtc agagtggaag
    32281 cagtaacgtt aacagggagt tgatactgct gacgacggct aaaaatgccg cccagacgaa
    32341 ttaccgttaa ggctgtttta tcgctttgtt gctgctgaag ttgcaggtga cgttgcacaa
    32401 tcgcgcctag gcgggtcaac atcccttgct gttgccaggc gtgaccggtc atcaatacat
    32461 caatttgttg ttgtatcaaa ttcaggcttt gcgcgtcata ccacaggcaa tctttcagca
    32521 aaatgagatc taccggggca acagcactgc gaccgctaaa aaaggcgctg gcctgcaata
    32581 atcggatcgc ttttttccag cgacgatccg agacataagg cgcatccggt aatttatcca
    32641 gttgctggcg cagcataaaa atcagctcaa atacatgatc gggcagcgta atttcaccaa
    32701 tctctttctg ccagcgttca tattcttcat ctgtgacctg caaggcatca ggaaccggat
    32761 tgtcgttttc atcctgttga ctggtcagca tggagcggaa attcgcttta tcctgcactt
    32821 tatctaacca cagacgaatc agcatgcggt catataacgc ttccagactg ctgtctgctt
    32881 ccggcagctc gttggaggcc gccaccagca gacgcatcgg gattttttct acgtgtgcac
    32941 cgttgcggaa ctggcgctcg ttaatggcgg tgagcaaggt attaagaatt gccgggcccg
    33001 ctttccagat ctcatccaga aagacaattt ctgcttccgg caggtaaccg ctggttaaac
    33061 gttcatagcg cccttcatct tttagcgcct gaatagaaag gggaccaaaa acttcttccg
    33121 gcgtggagaa gcgggtcatc agatattcaa acgcgcgggc attctgaaag gcgaatttta
    33181 agcgccgggc gatcaaactt ttggcaatac ctggcgggcc aaggaggaac acactttcac
    33241 cacttaatgc cgctaataaa cacaagcgga tggcgtggct acgttcataa agcccctttt
    33301 ccaacgaact gctcaggcgg gaaattcttt ccgctaataa atgagggtga gccataatga
    33361 agtggcgtcc tttcgtcaaa agttctgcgt aaattgcgag tatagacgtt tcttgctggt
    33421 ggctaaaata gtctcaaagg ggggtaatgc cagtcagtta agcaactgac tgg
//
LOCUS       DADMJE010000028        32955 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.029, whole genome shotgun sequence.
ACCESSION   DADMJE010000028 DADMJE010000000
VERSION     DADMJE010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32955)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32955)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32955
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.029"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..256
                     /locus_tag="JN001_001189"
     CDS             <1..256
                     /locus_tag="JN001_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prepilin peptidase-dependent pilin"
                     /protein_id="HAY9052490.1"
                     /translation="LDTCDGGSNGIPSPTTTRYVSAMSVAKGVVSLTGQESLNGLSVV
                     MTPGWDNANGVTGWARNCNIQSDSALQQACEDVFRFDDAN"
     gene            266..1640
                     /gene="gspE"
                     /locus_tag="JN001_001190"
                     /pseudo
     CDS             266..1640
                     /gene="gspE"
                     /locus_tag="JN001_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspE"
     gene            1630..2832
                     /gene="hofC"
                     /locus_tag="JN001_001191"
     CDS             1630..2832
                     /gene="hofC"
                     /locus_tag="JN001_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein transport protein HofC"
                     /protein_id="HAY9052491.1"
                     /translation="MASKQLWRWHGITGDGNAQDGMLWAESRALLLMALQQQMVTPLS
                     LKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAGQHPSKQWQALLQSLAH
                     DLEQGIAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVK
                     SALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLADFSGEWSW
                     LLVLFGFLLAIANKLLMRRPTWLIVRQKLLLRIPIMGSLMRGQKLTQIFTILALTQSA
                     GITFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNTGEFSPLCLQLVRTG
                     EASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHL
                     GDAMSGMG"
     gene            complement(2867..3910)
                     /gene="guaC"
                     /locus_tag="JN001_001192"
     CDS             complement(2867..3910)
                     /gene="guaC"
                     /locus_tag="JN001_001192"
                     /EC_number="1.7.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008461816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GMP reductase"
                     /protein_id="HAY9052492.1"
                     /translation="MRIEEDLKLGFKDVLIRPKRSTLKSRSDVELERQFTFKHSDQSW
                     SGVPIIAANMDTVGTFSMASALASFDILTAVHKHYSVEEWQAFINNSSADVLKHVMVS
                     TGTSDADFEKTKQILDLNPALNFVCIDVANGYSEHFVQFVAKAREAWPTKTICAGNVV
                     TGEMCEELILSGADIVKVGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGMIVS
                     DGGCTTPGDVAKAFGGGADFVMLGGMLAGHEESGGRIVEENGEKFMLFYGMSSESAMK
                     RHVGGVAEYRAAEGKTVKLPLRGPVENTARDILGGLRSACTYVGASRLKELTKRTTFI
                     RVQEQENRIFNNL"
     gene            4135..4755
                     /gene="coaE"
                     /locus_tag="JN001_001193"
     CDS             4135..4755
                     /gene="coaE"
                     /locus_tag="JN001_001193"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HAY9052493.1"
                     /translation="MRYIVALTGGIGSGKSTVANAFADLGINVIDADIIARQVVEPGA
                     PALHAIADHFGANMIAADGTLQRRALRERIFANPEEKNWLNALLHPLIQQETQHQIQQ
                     ATSPYVLWVVPLLVENSLYKKANRVLVVDVSPETQLKRTMQRDDVTREHVEQILAAQA
                     TREARLAVADDVIDNNGAPDAIASDVARLHAHYLQLASQFVSQEKP"
     gene            4755..5498
                     /gene="zapD"
                     /locus_tag="JN001_001194"
     CDS             4755..5498
                     /gene="zapD"
                     /locus_tag="JN001_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapD"
                     /protein_id="HAY9052494.1"
                     /translation="MQTQVLFEHPLNEKMRTWLRIEFLIQQLTVNLPIVDHAGALHFF
                     RNVSELLDVFERGEVRTELLKELDRQQRKLQTWIGVPGVDQSRIEALIQQLKAAGSVL
                     ISAPRIGQFLREDRLIALVRQRLSIPGGCCSFDLPTLHIWLHLPQAQRDSQVETWIAS
                     LNPLTQALTMVLDLIRQSAPFRKQTSLNGFYQDNGGDADLLRLNLSLDSQLYPQISGH
                     KSRFAIRFMPLDSENGQVPERLDFELACC"
     gene            5508..5705
                     /gene="yacG"
                     /locus_tag="JN001_001195"
     CDS             5508..5705
                     /gene="yacG"
                     /locus_tag="JN001_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HAY9052495.1"
                     /translation="MSETITVNCPTCGKTVVWGEISPFRPFCSKRCQLIDLGEWAAEE
                     KRIPSSGDLSESDDWSEEPKQ"
     gene            complement(5812..6201)
                     /gene="mutT"
                     /locus_tag="JN001_001196"
     CDS             complement(5812..6201)
                     /gene="mutT"
                     /locus_tag="JN001_001196"
                     /EC_number="3.6.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase MutT"
                     /protein_id="HAY9052496.1"
                     /translation="MKKLQIAVGIIRNENNEIFITRRAADAHMANKLEFPGGKIEMGE
                     TPEQAVVRELQEEVGITPQHFSLFEKLAYEFPDRHITLWFWLVESWEGVPWGKEGQPG
                     EWMSLVGLNADDFPPANEPVIAKLKRL"
     gene            complement(6261..8966)
                     /gene="secA"
                     /locus_tag="JN001_001197"
     CDS             complement(6261..8966)
                     /gene="secA"
                     /locus_tag="JN001_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HAY9052497.1"
                     /translation="MLIKLLTKVFGSRNDRTLRRMRKVVNIINAMEPEMEKLSDEELK
                     GKTAEFRARLEKGEVLENLIPEAFAVVREASKRVFGMRHFDVQLLGGMVLNERCIAEM
                     RTGEGKTLTATLPAYLNALTGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINLPG
                     MPAPAKREAYAADITYGTNNEYGFDYLRDNMAFSPEERVQRKLHYALVDEVDSILIDE
                     ARTPLIISGPAEDSSEMYKRVNKIIPHLIRQEKEDSETFQGEGHFSVDEKSRQVNLTE
                     RGLVLIEELLVKEGIMDEGESLYSPANIMLMHHVTAALRAHALFTRDVDYIVKDGEVI
                     IVDEHTGRTMQGRRWSDGLHQAVEAKEGVQIQNENQTLASITFQNYFRLYEKLAGMTG
                     TADTEAFEFSSIYKLDTVVVPTNRPMIRKDLPDLVYMTEAEKIQAIIEDIKERTAKGQ
                     PVLVGTISIEKSELVSNELTKAGIKHNVLNAKFHANEAAIVAQAGYPAAVTIATNMAG
                     RGTDIVLGGSWQAEVAALENPTAEQIEKIKADWQVRHDAVLEAGGLHIIGTERHESRR
                     IDNQLRGRSGRQGDAGSSRFYLSMEDALMRIFASDRVSGMMRKLGMKPGEAIEHPWVT
                     KAIANAQRKVESRNFDIRKQLLEYDDVANDQRRAIYSQRNELLDVSDVSETINSIRED
                     VFKATIDAYIPPQSLEEMWDIPGLQERLKNDFDLDLPIAEWLDKEPELHEETLRERIL
                     AQSIEVYQRKEEVVGAEMMRHFEKGVMLQTLDSLWKEHLAAMDYLRQGIHLRGYAQKD
                     PKQEYKRESFSMFAAMLESLKYEVISTLSKVQVRMPEEVEELEQQRRMEAERLAQMQQ
                     LSHQDDDSAAAAALAAQTGERKVGRNDPCPCGSGKKYKQCHGRLQ"
     gene            complement(9028..9540)
                     /gene="secM"
                     /locus_tag="JN001_001198"
     CDS             complement(9028..9540)
                     /gene="secM"
                     /locus_tag="JN001_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414639.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secA regulator SecM"
                     /protein_id="HAY9052498.1"
                     /translation="MSGILTRWRQFGKRYFWPHLLLGMVAASLGLPALSNAAEPNVPA
                     KATTRNHEPSAKVNFGQLALLEANTRRPNSNYSVDYWHQYAIRTVIRHLSFAMAPQTL
                     PVAEESLPLQAQHLALLDTLSALLTQEGTPSEKGYRIDYAHFTPQAKFSTPVWISQAQ
                     GIRAGPQRLT"
     gene            complement(9771..10688)
                     /gene="lpxC"
                     /locus_tag="JN001_001199"
     CDS             complement(9771..10688)
                     /gene="lpxC"
                     /locus_tag="JN001_001199"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000595491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HAY9052499.1"
                     /translation="MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDL
                     NPPVDFPADAKSVRDTMLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIP
                     IMDGSAAPFVYLLLDAGIDELNCAKKFVRIKETVRVEDGDKWAEFKPYNGFSLDFTID
                     FNHPAIDSCNQRYAMNFSADAFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVV
                     DDYRVLNEDGLRFEDEFVRHKMLDAIGDLFMCGHNIIGAFIAYKSGHALNNKLLQAVL
                     AKQEAWEYVTFQDDAELPLTFKAPSAVLA"
     gene            complement(10789..11940)
                     /gene="ftsZ"
                     /locus_tag="JN001_001200"
     CDS             complement(10789..11940)
                     /gene="ftsZ"
                     /locus_tag="JN001_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HAY9052500.1"
                     /translation="MFEPMELTNDAVIKVIGVGGGGGNAVEHMVRERIEGVEFFAVNT
                     DAQALRKTAVGQTIQIGSGITKGLGAGANPEVGRNAADEDRDALRAALEGADMVFIAA
                     GMGGGTGTGAAPVVAEVAKDLGILTVAVVTKPFNFEGKKRMAFAEQGITELSKHVDSL
                     ITIPNDKLLKVLGRGISLLDAFGAANDVLKGAVQGIAELITRPGLMNVDFADVRTVMS
                     EMGYAMMGSGVASGEDRAEEAAEMAISSPLLEDIDLSGARGVLVNITAGFDLRLDEFE
                     TVGNTIRAFASDNATVVIGTSLDPDMNDELRVTVVATGIGMDKRPEITLVTNKQVQQP
                     VMDRYQQHGMAPLTQEQKPVAKVVNDNAPQTAKEPDYLDIPAFLRKQAD"
     gene            complement(12001..13263)
                     /gene="ftsA"
                     /locus_tag="JN001_001201"
     CDS             complement(12001..13263)
                     /gene="ftsA"
                     /locus_tag="JN001_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017374018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HAY9052501.1"
                     /translation="MIKATDRKLVVGLEIGTAKVAALVGEVLPDGMVNIIGVGSCPSR
                     GMDKGGVNDLESVVKCVQRAIDQAELMADCQISSVYLALSGKHISCQNEIGMVPISEE
                     EVTQEDVENVVHTAKSVRVRDEHRVLHVIPQEYAIDYQEGIKNPVGLSGVRMQAKVHL
                     ITCHNDMAKNIVKAVERCGLKVDQLIFAGLASSYSVLTEDERELGVCVVDIGGGTMDI
                     AVYTGGALRHTKVIPYAGNVVTSDIAYAFGTPPSDAEAIKVRHGCALGSIVGKDESVE
                     VPSVGGRPPRSLQRQTLAEVIEPRYTELLNLVNEEILQLQEKLRQQGVKHHLAAGIVL
                     TGGAAQIEGLAACAQRVFHTQVRIGAPLNITGLTDYAQEPYYSTAVGLLHYGKESHLN
                     GEAEVEKRVTASVGSWIKRLNSWLRKEF"
     gene            complement(13260..14090)
                     /gene="ftsQ"
                     /locus_tag="JN001_001202"
     CDS             complement(13260..14090)
                     /gene="ftsQ"
                     /locus_tag="JN001_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ"
                     /protein_id="HAY9052502.1"
                     /translation="MSQAALNTRNSEEEVSSRRNNGTRLAGILFLLTVLTTVLVSGWV
                     VLGWMEDAQRLPLSKLVLTGERHYTRNDDIRQSILALGEPGTFMTQDVNIIQTQIEQR
                     LPWIKQVSVRKQWPDELKIHLVEYVPIARWNDQHMVDAEGNTFSVPPDRTSKQVLPML
                     YGPEGSANEVLQGYREMGQMLAKDRFTLKETAMTARRSWQLTLNNDIKLNLGRGDTMK
                     RLARFVELYPVLQQLAQTDGKRISYVDLRYDSGAAVGWAPLPPEESTQQQNQAQAEQQ
                     "
     gene            complement(14092..15012)
                     /locus_tag="JN001_001203"
     CDS             complement(14092..15012)
                     /locus_tag="JN001_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HAY9052503.1"
                     /translation="MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKE
                     VDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKL
                     LWQGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAE
                     NALQDALRLAFQHDEEVLIEKWLSGPEFTVAILGEEILPSIRIQPSGTFYDYEAKYLS
                     DETQYFCPAGLDASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPG
                     MTSHSLVPMAARQAGMSFSQLVVRILELAD"
     gene            complement(15005..16480)
                     /gene="murC"
                     /locus_tag="JN001_001204"
     CDS             complement(15005..16480)
                     /gene="murC"
                     /locus_tag="JN001_001204"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HAY9052504.1"
                     /translation="MNTQQLAKLRSIVPEMRRVRHIHFVGIGGAGMGGIAEVLANEGY
                     QISGSDLAPNPVTQQLMNLGATIYFNHRPENVRDASVVVVSSAISADNPEIVAAHEAR
                     IPVIRRAEMLAELMRFRHGIAIAGTHGKTTTTAMVSSIYAEAGLDPTFVNGGLVKAAG
                     VHARLGHGRYLIAEADESDASFLHLQPMVAIVTNIEADHMDTYQGDFENLKQTFINFL
                     HNLPFYGRAVMCVDDPVIRELLPRVGRQTTTYGFSEDADVRVEDYQQIGPQGHFTLLR
                     QDKEPMRVTLNAPGRHNALNAAAAVAVATEEGIDDEAILRALESFLGTGRRFDFLGEF
                     PLEPVNGKSGTAMLVDDYGHHPTEVDATIKAARAGWPDKNLVMLFQPHRFTRTRDLYD
                     DFANVLTQVDTLLMLEVYPAGEAPIPGADSRSLCRTIRGRGKIDPILVPDPAQVAEML
                     APVLTGNDLILVQGAGNIGKIARSLAEIKLKPQTPEEEQHD"
     gene            complement(16534..17601)
                     /gene="murG"
                     /locus_tag="JN001_001205"
     CDS             complement(16534..17601)
                     /gene="murG"
                     /locus_tag="JN001_001205"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HAY9052505.1"
                     /translation="MSGQGKRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTADR
                     MEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIFNAWRQARAIMKAYKPDVVLGM
                     GGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNKWLAKIATKVMQAFPGAFPNAEVVGN
                     PVRTDVLALPLPQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGDSVTIWHQS
                     GKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPA
                     LFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERAR
                     AASIPDATERVANEVSRAARA"
     gene            complement(17598..18842)
                     /gene="ftsW"
                     /locus_tag="JN001_001206"
     CDS             complement(17598..18842)
                     /gene="ftsW"
                     /locus_tag="JN001_001206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsW"
                     /protein_id="HAY9052506.1"
                     /translation="MRLSLPRLKMPRLPGFSILVWISTALKGWVMGSREKDTDSLIMY
                     DRTLLWLTFGLAAIGFIMVTSASMPIGQRLTNDPFFFAKRDGVYLILAFILAIITLRL
                     PMEFWQRYSATMLLGSIILLMIVLVVGSSVKGASRWIDLGLLRIQPAELTKLSLFCYI
                     ANYLVRKGDEVRNNLRGFLKPMGVILVLAVLLLAQPDLGTVVVVFVTTLAMLFLAGAK
                     LWQFIAIIGMGISAVVLLILAEPYRIRRVTAFWNPWEDPFGSGYQLTQSLMAFGRGEL
                     WGQGLGNSVQKLEYLPEAHTDFIFAIIGEELGYVGVVLALLMVFFVAFRAMSIGRKAL
                     EIDHRFSGFLACSIGIWFSFQALVNVGAAAGMLPTKGLTLPLISYGGSSLLIMSTAIM
                     MLLRIDYETRLEKAQAFVRGSR"
     gene            complement(18842..20158)
                     /gene="murD"
                     /locus_tag="JN001_001207"
     CDS             complement(18842..20158)
                     /gene="murD"
                     /locus_tag="JN001_001207"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HAY9052507.1"
                     /translation="MADYQGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGL
                     DKLPEAVERHTGSLNDEWLMAADLIVASPGIALAHPSLSAAADAGIEIVGDIELFCRE
                     AQAPIVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGLPALMLLDAECELYVLELS
                     SFQLETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRIYENAKVCVVNADDALT
                     MPIRGADERCVSFGVNMGDYHLNHQQGETWLRVKGEKVLNVKEMKLSGQHNYTNALAA
                     LALADAAGLPRASSLKALTTFTGLPHRFEVVLEHNGVRWINDSKATNVGSTEAALNGL
                     QVDGTLHLLLGGDGKSADFSPLARYLNGDNVRLYCFGRDGAQLAALRPEVAEQTETME
                     QAMRLLAPRVQPGDMVLLSPACASLDQFKNFEQRGNEFARLAKELG"
     gene            complement(20161..21243)
                     /gene="mraY"
                     /locus_tag="JN001_001208"
     CDS             complement(20161..21243)
                     /gene="mraY"
                     /locus_tag="JN001_001208"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HAY9052508.1"
                     /translation="MLVWLAEHLVKYYSGFNVFSYLTFRAIVSLLTALFISLWMGPRM
                     IAHLQKLSFGQVVRNDGPESHFSKRGTPTMGGIMILTAIVISVLLWAYPSNPYVWCVL
                     VVLVGYGVIGFVDDYRKVVRKDTKGLIARWKYFWMSVIALGVAFALYLAGKDTPATQL
                     VVPFFKDVMPQLGLFYILLAYFVIVGTGNAVNLTDGLDGLAIMPTVFVAGGFALVAWA
                     TGNMNFASYLHIPYLRHAGELVIVCTAIVGAGLGFLWFNTYPAQVFMGDVGSLALGGA
                     LGIIAVLLRQEFLLVIMGGVFVVETLSVILQVGSFKLRGQRIFRMAPIHHHYELKGWP
                     EPRVIVRFWIISLMLVLIGLATLKVR"
     gene            complement(21237..22595)
                     /gene="murF"
                     /locus_tag="JN001_001209"
     CDS             complement(21237..22595)
                     /gene="murF"
                     /locus_tag="JN001_001209"
                     /EC_number="6.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HAY9052509.1"
                     /translation="MISVTLSQLTDILNGELQGADITLDAVTTDTRKLTPGCLFVALK
                     GERFDAHDFADQAKAGGAGALLVSRPLDIDLPQLIVKDTRLAFGELAAWVRQQVPARV
                     VALTGSSGKTSVKEMTAAILSQCGNTLYTAGNLNNDIGVPMTLLRLTPEYDYAVIELG
                     ANHQGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIMN
                     ADNNDWLNWQSVIGSRKVWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLLP
                     LPGRHNIANALAAAALSMSVGATLDAIKAGLANLKAVPGRLFPIQLAENQLLLDDSYN
                     ANVGSMTAAVQVLAEMPGYRVLVVGDMAELGAESEACHVQVGEAAKAAGIDRVLSVGK
                     QSHAISTASGVGEHFADKTALITRLKSLIAEQQVITILVKGSRSAAMEEVVRALQENG
                     TC"
     gene            complement(22592..24079)
                     /gene="murE"
                     /locus_tag="JN001_001210"
     CDS             complement(22592..24079)
                     /gene="murE"
                     /locus_tag="JN001_001210"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HAY9052510.1"
                     /translation="MADRNLRDLLAPWVPDAPSRALREMTLDSRVAAAGDLFVAVVGH
                     QADGRRYIPQAIAQGVAAIIAEAKDEATDGEIREMHGVPVIYLSQLNERLSALAGRFY
                     HEPSDNLRLVGVTGTNGKTTTTQLLAQWSQLLGETSAVMGTVGNGLLGKVIPTENTTG
                     SAVDVQHELAGLVEQGATFCAMEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDM
                     EHYEAAKWLLYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSMEDHINPNCHGRWLKV
                     IDVNYHDSGVTIRFSSSWGDGEIESHLIGAFNVSNLLLALATLLALGYPLADLLKTAA
                     RLQPVCGRMEVFTVPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDK
                     GKRPLMGAIAEEFADVAVVTDDNPRTEEPRAIINDILAGMLDAGHAKVMEGRAEAVTC
                     AVMQAKENDVVLVAGKGHEDYQIVGNQRLDYSDRVTVARLLGVIA"
     gene            complement(24066..25832)
                     /locus_tag="JN001_001211"
     CDS             complement(24066..25832)
                     /locus_tag="JN001_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan glycosyltransferase FtsI"
                     /protein_id="HAY9052511.1"
                     /translation="MKAAAKTQKPKRQEEHANFISWRFALLCGCILLALAFLLGRVAW
                     LQVISPDMLVKEGDMRSLRVQQVSTSRGMITDRSGRPLAVSVPVKAIWADPKEVHDAG
                     GISVGDRWKALANALNIPLDQLSARINANPKGRFIYLARQVNPDMADYIKKLKLPGIH
                     LREESRRYYPSGEVTAHLIGFTNVDSQGIEGVEKSFDKWLTGQPGERIVRKDRYGRVI
                     EDISSTDSQAAHNLALSIDERLQALVYRELNNAVAFNKAESGSAVLVDVNTGEVLAMA
                     NSPSYNPNNLSGTPKEAMRNRTITDVFEPGSTVKPMVVMTALQRGVVRENSVLNTIPY
                     RINGHEIKDVARYSELTLTGVLQKSSNVGVSKLALAMPSSALVDTYSRFGLGKATNLG
                     LVGERSGLYPQKQRWSDIERATFSFGYGLMVTPLQLARVYATIGSYGIYRPLSITKVD
                     PPVPGERVFPESIVRTVVHMMESVALPGGGGVKAAIKGYRIAIKTGTAKKVGPDGRYI
                     NKYIAYTAGVAPASQPRFALVVVINDPQAGKYYGGAVSAPVFGAIMGGVLRTMNIEPD
                     ALTTGDKNEFVINQGEGTGGRS"
     gene            complement(25848..26213)
                     /gene="ftsL"
                     /locus_tag="JN001_001212"
     CDS             complement(25848..26213)
                     /gene="ftsL"
                     /locus_tag="JN001_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HAY9052512.1"
                     /translation="MISRVTEALSKVKGSMGSHERHALPGVIGDDLLRFGKLPLCLFI
                     CIILTAVTVVTTAHHTRLLTAQREQLVLERDALDIEWRNLILEENALGDHSRVERIAT
                     EKLQMQHVDPSQENIVVQK"
     gene            complement(26210..27151)
                     /gene="rsmH"
                     /locus_tag="JN001_001213"
     CDS             complement(26210..27151)
                     /gene="rsmH"
                     /locus_tag="JN001_001213"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HAY9052513.1"
                     /translation="MMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQ
                     LGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDL
                     GVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERF
                     AKRIARAIVERNREQPMTRTKELAEVVAAATPVKDKFKHPATRTFQAVRIWVNSELEE
                     IEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRGPQVPAGLPMTEEQLKKL
                     GGRQLRALGKLMPGEEEVAENPRARSSVLRIAERTNA"
     gene            complement(27153..27611)
                     /gene="mraZ"
                     /locus_tag="JN001_001214"
     CDS             complement(27153..27611)
                     /gene="mraZ"
                     /locus_tag="JN001_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HAY9052514.1"
                     /translation="MFRGATLVNLDSKGRLSVPTRYREQLLENAAGQMVCTIDIHHPC
                     LLLYPLPEWEIIEQKLSRLSSMNPVERRVQRLLLGHASECQMDGAGRLLIAPVLRQHA
                     GLTKEVMLVGQFNKFELWDETTWHQQVKEDIDAEQLATGDLSERLQDLSL"
     gene            complement(28213..29217)
                     /gene="cra"
                     /locus_tag="JN001_001215"
     CDS             complement(28213..29217)
                     /gene="cra"
                     /locus_tag="JN001_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite repressor/activator"
                     /protein_id="HAY9052515.1"
                     /translation="MKLDEIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVRE
                     HNYHPNAVAAGLRAGRTRSIGLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQ
                     PDNEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANAPFPIVALDRALDREHFTSVV
                     GADQDDAEMLAEELRKFPAETVLYLGALPELSVSFLREQGFRTAWKDDPREVHFLYAN
                     SYEREAAAQLFEKWLETHLMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDN
                     ELLDFLQCPVLAVAQRHRDVAERVLEIVLASLDEPRKPKPGLTRIKRNLYRRGVLSRS
                     "
     gene            complement(29299..29385)
                     /locus_tag="JN001_001216"
     CDS             complement(29299..29385)
                     /locus_tag="JN001_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fruR/shl operon leader peptide"
                     /protein_id="HAY9052516.1"
                     /translation="MCNLQPNMSRWAFFAKSVGTWNKSSCRS"
     gene            complement(29397..29888)
                     /gene="ilvN"
                     /locus_tag="JN001_001217"
     CDS             complement(29397..29888)
                     /gene="ilvN"
                     /locus_tag="JN001_001217"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001563086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HAY9052517.1"
                     /translation="MRRILSVLLENESGALSRVIGLFSQRGYNIESLTVAPTDDPTLS
                     RMTIQTVGDEKVLEQIEKQLHKLVDVLRVSELGQGAHVEREIMLVKIQASGYGRDEVK
                     RNTEIFRGQIIDVTPSLYTVQLAGTSDKLDAFLASIREVAKIVEVARSGVVGLSRGDK
                     IMR"
     gene            complement(29891..31615)
                     /gene="ilvI"
                     /locus_tag="JN001_001218"
     CDS             complement(29891..31615)
                     /gene="ilvI"
                     /locus_tag="JN001_001218"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025294.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HAY9052518.1"
                     /translation="MEMLSGAEMVVRSLIDQGVKQVFGYPGGAVLDIYDALHTVGGID
                     HVLVRHEQAAVHMADGLARATGEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLSGQ
                     VATSLIGYDAFQECDMVGISRPVVKHSFLVKQTEDIPQVLKKAFWLAASGRPGPVVVD
                     LPKDILNPANKLPYVWPESVSMRSYNPTTTGHKGQIKRALQTLVVAKKPVVYVGGGAI
                     MAGCHQQLKETVEALNLPVVSSLMGLGAFPATHRQALGMLGMHGTYEANMTMHNADVI
                     FAVGVRFDDRTTNNLAKYCPNATVLHIDIDPTSISKTVTADIPIVGDARQVLEQMLEL
                     LSQESAHQPLDEIRDWWQQIEQWRARQCLKYDTHSEKIKPQAVIETLWRLTKGDAYVT
                     SDVGQHQMFAALYYPFDKPRRWINSGGLGTMGFGLPAALGVKMALPEETVVCVTGDGS
                     IQMNIQELSTALQYELPVLVVNLNNRYLGMVKQWQDMIYSGRHSQSYMQSLPDFVRLA
                     EAYGHVGIQISHPHELESKLSEALEQVRNNRLVFVDVTVDGSEHVYPMQIRGGGMDEM
                     WLSKTERT"
     gene            complement(31933..32877)
                     /gene="leuO"
                     /locus_tag="JN001_001219"
     CDS             complement(31933..32877)
                     /gene="leuO"
                     /locus_tag="JN001_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LeuO"
                     /protein_id="HAY9052519.1"
                     /translation="MPEVQTDHSETAELSKPQLRMVDLNLLTVFDAVMQEQNITRAAH
                     VLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPG
                     SGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ
                     ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDR
                     FASFSQPWYDTVDKQASIAYQGMAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVL
                     PLPLKQNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR"
BASE COUNT         7911 a         9255 c         8018 g         7771 t
ORIGIN      
        1 attagatacc tgcgacggtg gcagcaatgg cattccctcg cctaccacca cccgctatgt
       61 ttcagccatg agtgtggcaa aaggcgtggt gtcgctgacc gggcaagaaa gtctcaatgg
      121 actaagcgtc gtcatgacgc caggttggga taacgcaaac ggcgtcaccg gctgggcgcg
      181 caactgcaat attcaaagtg acagcgcatt gcagcaagcc tgcgaagatg tcttccgctt
      241 tgatgacgcc aactaaggag cggcaatgaa tattccacag ctcaccgccc tgtgtctgcg
      301 ttatcaggga gtcttgctgg atgccagcga agaggtggtt catgttgcgg tagtcgatgc
      361 accttcgcat gagttgctgg acgcattgca tttcgctacc accaaacgta ttgagatcac
      421 ctgctggacg cgccaacaaa tggaaggcca cgccagtcgc acacaacaga cattgcccgt
      481 agctgttcag gagaagcatc agtcgaaagc agagttgctg actcgaacgt tacaatctgc
      541 gctggaacaa cgtgcgtctg atattcatat cgaaccagcg gacaatgcct accgcatccg
      601 cttgcgtatc gacggcgtat tgcatccttt accggatgtt tcaccggatg ccggagtcgc
      661 attaaccgcc agattaaaag tgctgggaaa cctggatatt gcggaacatc gcctgccgca
      721 ggacgggcaa ttcactgtcg aactggcagg aaacgccgtc tcatttcgta ttgcgacctt
      781 accatgtcgg ggtggtgaaa aggtggtatt aaggttgtta cagcaggtga accaggcact
      841 ggatgttaac acgctgggaa tgcagccgtt acaactggcg gactttgctc atgccttgca
      901 acaaccacag ggactggtgc tggtaactgg ccctacaggc agcggcaaaa cggtcacgct
      961 ttatagtgcc ctgcaaaagc tgaataccgc tgacattaat atttgtagcg tcgaagatcc
     1021 ggttgagatc cccatagccg gactaaacca gacgcaaatc catccgcgtg ccgggctcac
     1081 ctttcagggc gttttgcgtg cgttattgcg ccaggatcct gacgtcatca tgatccgatg
     1141 gcgaaacggc agaaattgcc attaaagccg cgcaaaccgg tcacctggtg ttgtctaccc
     1201 tacacactaa ttccacctgc gaaacgctgg tacgtttaca gcaaatggga gtcgcccgct
     1261 ggatgctctc atcagcgctt acgctggtaa tagcccagcg tctggtacgt aaattttgcc
     1321 cacattgtcg ccagcagcaa ggggagccca tccatattcc agacaatgta tggccgtcgc
     1381 cgctgcccca ctggcaggca cccggttgtg tacattgcta ccacggtttt tatggtcgta
     1441 ccgccttgtt tgaagtcctg cccattacac cagccatacg ccagcttatt tccgctaata
     1501 ccgacgttga atcgctggaa acgcacgcac gacaggcggg tatgcgtacg ctttttgaaa
     1561 acggctgcct agccgtggag caaggcttaa ccacctttga agagttaatc cgcgtactgg
     1621 ggatgccgca tggcgagtaa gcaactctgg cgctggcatg gcataaccgg cgacggcaat
     1681 gcgcaagatg ggatgctatg ggcagagagc cgtgctttgc tgctcatggc actacagcaa
     1741 cagatggtta ccccacttag cctgaagcga atcgccatca attctgcgca gtggcgagga
     1801 gataaaagcg cggaagtcat tcatcaactg gcgacgctac tcaaagccgg gttaacgctt
     1861 tctgaagggc tggcactgct ggcgggacag catcccagta agcaatggca agcgttgctg
     1921 caatcgctgg cgcacgatct cgaacagggc attgcttttt ccaatgcctt attaccctgg
     1981 tcagaggtat ttccgccact ctatcaggcg atgatccgca cgggtgaact gaccggtaag
     2041 ctggatgaat gctgctttga actggcgcgt cagcaaaaag cccagcgtca gttgaccgac
     2101 aaagtgaaat cagcgttacg ttatcccatc atcattttag cgatggcaat catggtggtt
     2161 gtggcaatgc tgcattttgt tctgccggag tttgccgcta tctataagac cttcaacacc
     2221 ccactaccgg cactaacgca ggggatcatg acgctggcag actttagtgg cgaatggagc
     2281 tggctgctgg tgttgttcgg ctttctgctg gcgatagcca ataagttgct gatgcgccga
     2341 ccgacctggc ttatagtgcg gcagaaattg ctgttacgca tcccgattat gggttcactg
     2401 atgcggggac aaaaactcac gcagatcttt acgattctgg cgctgacaca aagtgcaggc
     2461 attacttttt tgcagggcgt agagagcgtc agagaaacaa tgcgctgccc gtactgggtg
     2521 caacttctga cacaaatcca gcacgatatc agtaacggtc atcccatctg gctggcgcta
     2581 aaaaataccg gggagtttag cccgctctgt ttgcaattag tgagaacagg agaggcatcc
     2641 ggctcgctgg acctcatgtt agacaacctc gcccatcatc atcgggataa cacaatggcg
     2701 ctggcggata acctcgcagc cttactggaa ccggcgttgc tgatcataac gggaggaatt
     2761 atcggtacgc tggtggtggc gatgtatctg ccaattttcc atttaggcga tgcgatgagt
     2821 gggatgggat aacgctggcg tgttgctcca caccagcgtt ggaagattac aggttgttga
     2881 agatgcggtt ttcttgttcc tgcacacgga taaatgtggt gcgcttggtc agttctttca
     2941 ggcgtgaagc cccaacgtat gtacaagctg aacgcaggcc gcccaaaata tcacgcgcgg
     3001 tattttcaac cgggcctcgc agcggcagct taacggtttt accttctgct gcgcgatatt
     3061 ccgcaacgcc gccaacgtga cgtttcatcg cagactcgga gctcatgccg tagaacagca
     3121 taaatttctc gccgttctcc tcaacgatgc gaccgccgct ctcttcgtgg cccgccagca
     3181 tgccgccaag catgacgaaa tcggcaccgc cgccaaaggc ttttgcgaca tcgcccggcg
     3241 tggtgcagcc accgtcgctg acgatcattc cgcccagacc gtgcgccgca tcggcacatt
     3301 cgattaccgc agaaagctgc ggataaccga cgcctgtttt gacgcgagtt gtacaaacag
     3361 aacctgggcc aatgccaact ttaacgatat cagcaccgga gaggataagc tcctcacaca
     3421 tttcaccagt cactacgttg ccagcacaaa tggttttggt cggccacgct tcacgcgctt
     3481 tcgcaacgaa ctgcacgaag tgttcggaat aaccattcgc cacatcaata caaacaaagt
     3541 ttaatgccgg gttcaggtcg agaatctgtt tagttttttc gaaatccgca tcagacgtac
     3601 cggtagaaac catcacatgt ttcagcacat cagcggaaga attgttgata aacgcttgcc
     3661 actcttcgac agaatagtgt ttatgcacag cagtcaaaat atcaaaagaa gccagcgcag
     3721 aggccataga aaatgtacct acggtgtcca tatttgcggc gataatcggc acgccggacc
     3781 agctctgatc tgaatgtttg aaggtgaatt gacgttccag ttcaacatcg gaacggcttt
     3841 taagagtgga gcgtttaggg cggatgagaa cgtctttaaa acctaacttc agatcttctt
     3901 caatacgcat gtgcggattc ctggggttaa tggctataag ggtaagagcg caactccagt
     3961 gacgctatca tacgcactaa tcaatgcggc gcaagactgc gaaattgtct ttttttacgc
     4021 tacaatccca taaatttacc tggtaaatag tgagcgaacg tttcatcaat ttcgctttcg
     4081 tgcactcatt tttaacgttt tgataatcat gatgaattcc cgggaatata aattatgagg
     4141 tatatagttg ccttaacggg aggcattggc agtggcaaga gtaccgttgc caatgcgttt
     4201 gctgatctcg gaattaacgt cattgatgcc gatattattg cgcgtcaggt ggttgaacca
     4261 ggtgcacctg cgctacatgc cattgctgat cactttggcg ctaacatgat tgctgctgat
     4321 ggaacattgc agcgccgggc cttgcgcgag cggatcttcg ccaacccgga agagaaaaac
     4381 tggcttaacg ccctgctgca tccgctgatt cagcaagaga cgcaacacca gatccagcaa
     4441 gctacttccc cctatgtact gtgggttgtg ccattgctgg tagaaaactc actgtataaa
     4501 aaagcgaatc gagtgctggt ggtggatgtc agcccagaaa cgcaacttaa gcgcaccatg
     4561 cagcgcgatg atgtaactcg cgagcatgtc gaacaaatcc ttgctgctca ggcaacgcgc
     4621 gaagcccgcc ttgccgtggc agatgacgtc attgataata acggcgcacc ggatgctatc
     4681 gcatcggatg ttgcccgcct gcacgcacac tatttgcagc ttgcgtcgca gtttgtctca
     4741 caggaaaaac cgtaatgcag acccaggtcc tttttgaaca tccactaaat gaaaaaatgc
     4801 gtacatggct gcgcattgag tttttgattc agcaactcac cgttaattta cccatcgttg
     4861 accacgctgg cgcgctgcat ttcttccgta atgtcagtga attactggat gttttcgagc
     4921 gcggcgaagt ccgcactgag ctgttgaaag aacttgaccg gcagcaacgt aaactccaga
     4981 cctggattgg cgtgcctggc gtggaccaga gccgtattga agcattaatt cagcagttaa
     5041 aagcggcggg gagcgtatta atttccgcgc cgcgtatcgg gcaatttctg cgtgaagatc
     5101 gtttgattgc tctggtgcgt cagcgactga gcatcccagg cggctgttgc agctttgatt
     5161 tacctacatt gcacatttgg ctgcatctac cccaggcgca gcgcgacagc caggtagaaa
     5221 cctggattgc cagcctgaac ccgctcaccc aggcacttac catggtgctg gatttaattc
     5281 gccagtcggc ccccttccgt aaacaaacca gcctgaatgg tttttatcag gataacggtg
     5341 gcgatgccga cttgctgcgc ctgaatctgt cgctcgattc acagctttat ccgcaaattt
     5401 ccggacataa gagccgtttt gccattcgtt ttatgccgct ggacagtgaa aacggacagg
     5461 taccggaacg tctagatttc gaactggcct gttgctaagg agtgaaaatg tcagaaacta
     5521 ttacggtgaa ttgcccaacc tgcgggaaaa cggtggtatg gggtgaaatc agcccgtttc
     5581 ggccattttg ctccaaacgt tgtcagctga tcgacctcgg agaatgggct gctgaagaaa
     5641 aacgaatccc cagcagtggc gatctttccg aaagcgatga ctggagcgaa gagccaaagc
     5701 agtgacattg gtctgatgcc gcacataggc ctgataagac gcggacagcg tcgcatcagg
     5761 catcttgtgc aaatgtcgga tgcggcgtga acgccttatc cgacctacag actacagacg
     5821 cttaagcttc gcaattaccg gttcattggc tggcggaaaa tcatcggcat taagaccgac
     5881 cagcgacatc cactcaccgg gttgcccttc tttaccccac ggcacccctt cccaactttc
     5941 gaccagccag aaccacagag ttatatgcct gtccgggaat tcatatgcca gtttttcaaa
     6001 tagcgaaaaa tgttgtgggg taatcccgac ctcttcctga agttcacgca ccaccgcctg
     6061 ttccggcgtt tcgcccattt caattttacc gccgggaaac tccagtttat tcgccatgtg
     6121 cgcatctgct gcgcgacgcg ttataaagat ttcattgttc tcgttgcgaa taatacctac
     6181 cgcaatttgc agctttttca ttgttttaaa cctataaaaa aggcgcagaa tcctgcgcct
     6241 tttgcttcaa cagttagctt ttattgcagg cggccatgac actgcttgta ttttttacca
     6301 gaaccgcacg ggcaaggatc gttacgtcct actttgcgct caccggtttg cgccgccagt
     6361 gcagctgcgg ctgcagagtc gtcatcctga tggctaagct gctgcatttg cgctaaacgc
     6421 tcggcttcca tacgacgctg ttgttccagc tcctcaacct cttcaggcat acgtacctga
     6481 actttgctca gcgtactgat aacttcatat ttcaacgact ccagcatcgc tgcaaacatg
     6541 gagaacgatt cacgtttgta ttcctgcttc ggatctttct gtgcatagcc acgcaggtgg
     6601 ataccctgac gcagatagtc catcgctgcc aggtgctctt tccacaggga gtcaagcgtt
     6661 tgcagcatga cgcctttctc gaagtgacgc atcatctcag caccaaccac ttcttcttta
     6721 cgctgataca cttcgatgga ctgcgccaga atgcgctcac gcagcgtctc ttcatgcagt
     6781 tctggttctt tatccagcca ctcggcaatt ggtaaatcga ggtcgaaatc gttcttcaga
     6841 cgttcctgca gccccggaat atcccacatt tcttccagcg actgtggcgg aatgtaggca
     6901 tcaatggtgg ctttgaacac atcttcacga atgctgttga tggtttcgct cacatcgctg
     6961 acatccagca gttcgttacg ctgggagtaa atggcgcgac gctgatcgtt agccacgtca
     7021 tcatattcca gcagttgctt acgaatgtcg aagttacgac tttcaacttt acgctgggcg
     7081 ttggcaatcg ctttagtcac ccacgggtgt tcaatggctt cgcctggctt catacccagt
     7141 ttacgcatca tgccggatac tcggtcggaa gcaaaaatac gcatcagcgc atcttccatc
     7201 gacaggtaga aacgggaaga accagcatcc ccctgacgac cagaacgacc gcgcaactgg
     7261 ttatcgatac gacgggattc gtgacgctcg gtaccgatga tatgcaggcc acctgcttcc
     7321 agtaccgcat cgtgacgtac ctgccagtcg gctttaattt tttcaatttg ctctgcggtc
     7381 ggattttcca gcgcggcaac ttctgcctgc cagctaccac cgagcacaat atctgtacca
     7441 cgacccgcca tattggtcgc gatagtcacc gcagccggat aacctgcctg agcaacaatc
     7501 gccgcttcgt tggcgtggaa tttggcgttc aggacgttgt gcttaatacc ggctttggtc
     7561 agttcgtttg acaccagctc cgatttttcg atggagatag tacccaccag caccggctgg
     7621 cctttcgcag tacgttcttt gatatcttca atgatcgcct gaattttttc cgcttcagtc
     7681 atgtagacca ggtccggcag atctttacga atcattggac ggttggtcgg aacaacgacg
     7741 gtatccagct tgtagatgga gctaaattcg aaagcttcgg tatcagcagt accggtcatc
     7801 cccgccagtt tttcatacag acggaagtag ttctggaagg tgatcgaagc cagcgtttgg
     7861 ttttcgttct ggatctgcac accttctttc gcttccacag cctggtgcag accatcggac
     7921 cagcgacggc cctgcatggt acgaccggtg tgttcgtcaa cgatgataac ttcaccatct
     7981 ttaacgatgt agtcgacgtc gcgggtaaac agcgcatgag cgcgcagcgc cgccgttacg
     8041 tggtgcatca gcatgatgtt ggccggagag tacagagact ccccttcatc catgatgccc
     8101 tctttcacca gcagttcttc aatcagcacc agaccacgtt cggtcaggtt cacctggcga
     8161 gatttttcgt ccaccgagaa gtggccttcg ccctggaagg tttcggagtc ttctttttcc
     8221 tgacggatca ggtgcggaat aattttattc acgcgtttat acatttccga gctgtcttct
     8281 gccgggccgg aaatgatcag cggtgtacgc gcttcatcga tcaggatgga gtccacttcg
     8341 tccaccagcg catagtgcag tttacgctgt acacgttctt cagggctgaa cgccatattg
     8401 tcgcgcaggt agtcaaagcc gtattcgttg ttcgtaccgt aagtgatgtc agctgcgtaa
     8461 gcttcgcgct ttgccggtgc tggcatgccc ggcaggttga taccgacagt caggccaagg
     8521 aattcaaaca gcggacggtt gttttcggcg tcacgttgcg ccaggtagtc gttgacggta
     8581 actacgtgca cgcctttacc ggttagtgcg ttcaggtaag caggcagcgt tgcggtcagg
     8641 gttttacctt caccggtacg catttcggcg atgcagcgtt cgttaagaac cataccgccg
     8701 agtaactgaa cgtcgaagtg acgcatacca aagacgcgct tacttgcctc acgtaccacg
     8761 gcgaaagctt ccgggatcag attttccagc acttcgcctt tttccagacg tgcacgaaac
     8821 tctgcggttt tccctttcag ttcttcgtcg gagagttttt ccatctccgg ttccatggca
     8881 ttgatgatgt tgaccacttt gcgcatccgg cgcagggtgc gatcgttacg actaccgaaa
     8941 actttagtta acaatttgat tagcataata aaatctcaaa cgccccgcgt tgcggagtta
     9001 ataaaatgaa gtaaaggttt attgttgtta ggtgaggcgt tgagggccag cacggatgcc
     9061 ttgcgcctgg cttatccaga cgggcgtgct gaattttgct tgtggggtaa aatgcgcata
     9121 atcaatgcga taaccctttt cagacggcgt gccttcctgg gtcagcagcg cgctgagcgt
     9181 atccagtaat gcaagatgtt gcgcctgaag aggcaaagat tcttcagcaa cgggcagtgt
     9241 ttgcggtgcc attgcgaaag aaagatgacg gattaccgtg cgaatggcat attgatgcca
     9301 gtaatcaacg gaatagttcg aattcgggcg gcgtgtgttc gcttccagca aggccaattg
     9361 accaaagtta actttggctg aaggctcgtg gttgcgggtt gtcgcttttg cgggcacgtt
     9421 tggttcggcg gcgttgctga gcgcaggcaa acctaaactc gccgcgacca tccctaataa
     9481 gagatgcggc cagaagtagc gtttaccaaa ctgtcgccag cgcgtcagta ttccactcac
     9541 gttattgcca tcccgatcga attcaaacgt atttagcgca caaatcttat cattaaagcc
     9601 tgaagtccac agcatgaatg aagataagtt gtgcgtaaaa gtgcttaaga aaacagcgtt
     9661 cgcaccgttt tttatagctc ttataaaatt caaaaaaaaa cgactggttc acctggccgg
     9721 agagagtgcc agatttgcca gtcgaatttt atacgacagt ataaatgtcg ttatgccagt
     9781 acagctgaag gcgctttgaa ggtcaacggc agttctgcgt cgtcctggaa ggtcacatat
     9841 tcccaagctt cctgtttcgc caggacagcc tgcagcagtt tgttattcag tgcatgaccg
     9901 gatttataag cgataaatgc accaataata ttgtgaccac acatgaacaa gtcaccgatc
     9961 gcatcgagca ttttgtgacg cacaaattcg tcttcaaaac gcaggccgtc ttcgttcagt
    10021 acgcgataat cgtcaacaac gatggcacaa tcgaagctgc cgcccaggca caaaccacgg
    10081 gactgcagat attcgatatc acgcatgaaa ccgaacgtac gcgcacggct gatctggcgc
    10141 ataaacgcat cagcggagaa gttcatcgca tagcgctggt tgcaggaatc aatagccgga
    10201 tggttaaaat cgatggtgaa atccagcgaa aaaccattgt acggcttaaa ttcagcccac
    10261 ttatcgccat cttcgacacg aacagtctct ttgatgcgaa caaatttttt ggcgcagttc
    10321 aactcgtcga taccggcgtc aagcagcagg tatacaaacg gagcggcgct gccgtccatg
    10381 atcgggattt ccggcgcgtt aacttcgata acaatgttat cgatgcccag gcccgcgaga
    10441 gcagcattga ggtgctctac ggttgaaatc cgtacatcat gctcgttgac cagacacgta
    10501 cagagcatgg tatcacgcac agatttggca tcggccggga aatctaccgg tggattcaag
    10561 tcggtgcgac gatagatgac cccggtgttg gccggcgcag ggcgtaacgt cagagtgact
    10621 ttcttgccgg tatgtaaacc gacacccgtc gcctgaacga tacgtttaag tgtcctttgt
    10681 ttgatcatcg tattatctcg ccaaattacc tatccaaccg aagtgtacta tacattcggc
    10741 gggccagttt agcacaaaga gcctcgaaac caaaattcca gtcaattctt aatcagcttg
    10801 cttacgcagg aatgctggga tatccagata atccggctct ttcgcagttt gcggcgcatt
    10861 gtcattcacg actttagcaa ccggcttctg ctcctgggtc agcggagcca tcccatgctg
    10921 ctggtagcga tccatcactg gctgctgaac ctgcttattg gtcaccagag tgatttcagg
    10981 acgtttgtcc atgccgatac ctgtcgcaac aacggttacg cgcagctcgt cattcatatc
    11041 cgggtcaaga gaagtaccga taaccacagt cgcgttgtcg gaagcaaatg cacggatggt
    11101 gttacctacc gtttcgaact catccagacg caggtcgaag cccgccgtga tgttaaccag
    11161 cacgccgcgc gcgccagaca ggtcgatatc ttccagcagc ggagaagaga tagccatttc
    11221 agcagcttct tccgcacggt cttcaccgct cgccacgcca gaacccatca ttgcgtagcc
    11281 catctcagac attacggtgc gtacgtctgc aaagtccacg ttcatcaaac ccggacgagt
    11341 aatcagttca gcgatacctt gcacagcgcc tttcagtaca tcgttcgctg cgccaaacgc
    11401 atccagcagg gagataccgc ggcccagaac tttcagcagt ttgtcgttcg ggatagtgat
    11461 cagagagtcc acatgcttgg acagttcagt gatcccctgc tccgcgaatg ccatacgctt
    11521 cttgccttca aagttgaaag gcttagtgac gacagcaacg gtcaggatac ccaaatcttt
    11581 tgccacttca gcgacgactg gtgctgcacc tgtaccggta ccaccaccca tacccgcagc
    11641 aataaagacc atgtctgcac cttccagcgc cgcacgcaat gcatcgcgat cctcatcagc
    11701 cgcattgcgg ccaacttctg gattagcgcc agcgcccagt cctttggtga taccgctacc
    11761 gatttgaatc gtctgtccaa ccgctgtttt acgcagcgct tgtgcatcgg tatttaccgc
    11821 gaagaattca acaccttcaa tgcgctcgcg caccatgtgt tcaacagcat taccgccgcc
    11881 gccgccgacg ccgatgactt taatcaccgc gtcattggta agttccattg gttcaaacat
    11941 agtttctctc cgatttgtgc ctgtcgcctg aggccgtaat catcgtcggc ctcataaaaa
    12001 ttaaaactct tttcgcagcc aactattgag tcgcttgatc cacgagccaa ctgatgctgt
    12061 aacacgtttt tctacttcag cttcaccgtt aagatgtgac tctttcccat agtgaagcaa
    12121 tcccaccgcc gtcgaataat acggctcctg agcataatcc gttaaaccgg taatgttcag
    12181 cggcgcgccg atacgcactt gcgtatgaaa cacgcgctga gcacaggctg caagaccttc
    12241 gatctgcgct gcgccaccgg ttaatacaat gcctgccgcc aggtgatgtt taaccccttg
    12301 ttggcgaagc ttttcctgca actgcaatat ctcttcgttg accaggttga gcagctcggt
    12361 atagcgcggc tcgatcacct ctgccagggt ctgacgttgc agactccgtg gcggacgacc
    12421 gcctacgctc ggcacttcca cgctctcatc ttttccaacg atggaaccca gcgcacaacc
    12481 gtggcgaact ttaatcgctt cggcgtcgct tggcggcgtg ccaaaggcgt aagcgatatc
    12541 actggtcacg acattgccag cataaggaat taccttagtg tggcgcaatg ccccaccggt
    12601 ataaacggcg atatccattg taccacctcc gatatcgacg acgcagacac ccagttcacg
    12661 ttcatcttcc gtcaataccg aataacttga tgccagtccg gcaaatatca gttggtcaac
    12721 tttcagccca caacgttcaa ccgctttgac gatgtttttc gccatatcgt tgtgacatgt
    12781 gatcaggtgc acttttgcct gcatccgcac gcccgaaagt cctaccggat tcttgatccc
    12841 ttcctgatag tcaatcgcat actcttgcgg gatcacatgc agcacacgat gttcatcgcg
    12901 cacacgcacc gatttcgcgg tatggacgac gttttccaca tcttcttgcg tcacttcttc
    12961 ttcagaaata ggcaccatac caatttcatt ctggcagctg atgtgcttac cagaaagcgc
    13021 cagatatacc gaagagatct gacaatctgc catcaattct gcctggtcaa tggcgcgttg
    13081 tacgcacttg accacggatt cgaggtcgtt caccccgcct ttatccatac cacgtgacgg
    13141 gcagctgccc acgccaatga tattgaccat accgtcgggc agaacttccc ctactaaagc
    13201 ggcaaccttc gcggtaccaa tctccagtcc tactaccagt tttctgtccg tcgccttgat
    13261 cattgttgtt ctgcctgtgc ctgattttgt tgctgagtag attcctctgg cggcaagggc
    13321 gcccagccta ctgccgctcc agagtcataa cgcaaatcaa cgtagctaat ccgtttgcca
    13381 tcggtttgcg ccagctgctg taaaaccgga taaagttcta caaagcgagc caaacgtttc
    13441 atcgtatcgc cccggccaag attgagctta atatcgttat tcagcgtcaa ctgccaggaa
    13501 cgccgcgcgg tcatcgccgt ttccttcaga gtaaatctgt cctttgccag catctgcccc
    13561 atttcgcgat agccctgcaa cacttcattg gcgctgcctt ccgggccata cagcattgga
    13621 agcacctgct tgctggtgcg atctggcggc acgctgaagg tgtttccttc cgcgtctacc
    13681 atatgttgat cattccaccg cgcaatcggc acatattcaa ccagatgaat cttcaattca
    13741 tcaggccact gctttctgac gctcacctgc ttaatccacg gcaggcgttg ttctatttgc
    13801 gtctggatga tgttgacatc ctgggtcata aaggtacccg gctcacccaa tgccaggatc
    13861 gactgccgga tatcgtcatt acgcgtgtaa tggcgttcac cggtcaacac cagctttgag
    13921 agcggcaggc gttgcgcatc ttccatccag cccaacacga cccagccgct caccaacact
    13981 gtcgttaaaa cggtcagcag gaaaaggatc cccgccagac gcgttccatt attgcggcga
    14041 gaagaaacct cttcttcgct gtttcgcgtg ttcagagcag cctgcgacat attagtccgc
    14101 cagttccaga attcgtacta ccaactgcga gaagctcata cctgcctgac gtgccgccat
    14161 cggcaccagg ctgtggctgg tcatacccgg tgaggtattg gcttccagca gataaaactg
    14221 tccatcgctg tccagcataa cgtcaatacg tccccatcct ttgcaaccta acgtcgtcca
    14281 tgctttcagc actaatgcct gcaaattggc ctcttgtgac gcatccagac ctgcggggca
    14341 gaaatactgt gtctcatcag agagatactt cgcctcataa tcatagaagg ttccggacgg
    14401 ttgaatacgt attgacggta aaatttcttc accgagtatc gcaaccgtga actccggccc
    14461 acttagccat ttttcaatca atacttcttc atcgtgctga aatgccaatc ttaatgcatc
    14521 ttgtagagca ttttctgcta ctacttttga cattcccaca ctggaacctt cgcggctcgg
    14581 cttaacgata accggcaaac ccagagcaga aatttctgct aactgcttat cgctcaggcc
    14641 tttttcaaac tctgcgcggg ttaacgctac ccacggcgcg accggtaaac cggcaccttg
    14701 ccacagcagt ttgctgcgta gtttatccat tgaaagcgca gatgccatca ctccgctgcc
    14761 ggtataaggc aagcccatca gctcgagcat gccctgcagc gtaccatctt caccgccgcg
    14821 accgtgtagc gcgataaaca ctttctgaaa acccatcgac ttcagttgcg tcacgtcgac
    14881 ttctttcggg tcgacaggat acgcatcaat accaccttca cgcagcccgg ctaacaccgc
    14941 tgcgccagaa ttcagagaaa cttcccgctc agcggaagtc ccgcccaaca ggaccgcgat
    15001 tttatcagtc atgttgttct tcctccggag tttgcggctt cagtttgatt tcagctaaag
    15061 aacgggcaat ttttccgata ttaccagccc cctgaacgag aatcaggtcg ttaccggtta
    15121 ataccggtgc cagcatctcg gctacctgcg cagggtccgg caccagaatg ggatcaattt
    15181 tcccacgtcc acgaattgtg cgacacagcg aacggctgtc cgctcccgga attggcgctt
    15241 cgccagccgg atacacttcc agcatcaaca gggtatcaac ctgcgtcagc acattggcga
    15301 aatcatcata caagtcgcgc gtacgggtaa aacggtgcgg ctgaaacagc attaccaggt
    15361 ttttatccgg ccagcctgcg cgcgccgctt taatggtggc gtcaacttcc gtcgggtggt
    15421 ggccgtagtc atcgaccagc attgccgtac cgcttttacc attcactggc tccagcggga
    15481 attcaccgag gaaatcaaaa cggcgaccag tccccaggaa gctctccagc gcacgcaaaa
    15541 tagcctcgtc gtcaattccc tcttccgtag caaccgcaac cgcagctgcg gcgttcagcg
    15601 cgttatgacg gcctggcgca ttcagggtga cgcgcatcgg ctctttgtcc tggcgcagca
    15661 gcgtaaagtg cccctgcggg ccaatctgct gataatcttc tacacgcacg tcggcatctt
    15721 cgctgaagcc gtaagtcgtg gtctgacgtc ccacacgcgg taacaattcg cggatcaccg
    15781 gatcatcaac acacatcacc gcacgaccgt aaaacggcag gttgtgcaga aaattaataa
    15841 aagtctgttt taaattctca aagtcgccct ggtaggtatc catgtggtcg gcttcgatat
    15901 tggtgacaat cgccaccatc ggttgcagat gcaggaacga tgcatcactc tcatctgctt
    15961 cggcaatcag gtaccgacca tgccccaaac gcgcatgaac ccccgccgct tttaccagcc
    16021 cgccgttaac gaaggttggg tcgagccccg cttctgcgta gatgctggaa accatcgcgg
    16081 tggttgtcgt tttgccgtgc gttcctgcaa tggcgatgcc atgacgaaaa cgcattaact
    16141 cagccagcat ttcggcacga cggatcaccg gaatacgcgc ttcatgagct gcgacaattt
    16201 ccgggttatc ggcagaaatg gcgctggaaa caacgaccac gctggcatca cgtacgtttt
    16261 ccgggcgatg gttgaaataa atcgtcgctc ccagattcat taactgctgc gtgaccggat
    16321 ttggcgctaa atcggaacca ctgatctgat aaccttcatt ggccagaact tcggcaatac
    16381 cgcccatacc ggcaccaccg atgccgacaa aatgtatgtg ccgaacgcga cgcatttcgg
    16441 gcacgatgga acgcagtttt gccaattgtt gtgtattcat tctttacgcc attaacttct
    16501 taaattcata cgatgcaaaa ggcatcgcta caattacgcc cgggcagccc ggctcacttc
    16561 atttgccact cgctcggtgg catccggaat ggatgcagcg cgggcgcgtt ctgccatggt
    16621 taataaggtt tctcgcgacc acccggccag ggtgttggcg acagcatcca cgctaagctg
    16681 tggctgctcg ataattttgg ctgcgcccgc tttttccagc ggtagcgcat tccagtattg
    16741 ctggcggtct ttatgttgaa acggcacaaa caacgccggt agtcctgccg cggcgatttc
    16801 actcaccgtt aaagcaccgg agcggcaaac gacgacatcc gcccacgcat acgccgccgc
    16861 catatcatca ataaattccg tcactttatg ctgcggttgc cccgcttcgg catacgcctg
    16921 ttcaacggat tgttgcgaac ctttaccgct ctgatgccag atagtgactg aatcacccag
    16981 tttcgcagca acctgcggca ttgtctggtt aagaatgcgt gcgccctggg aaccacccac
    17041 taccagcaca cgaaccggac cttcacgtcc agccaaacgt tgctgcggca acggcagcgc
    17101 cagcacatcg gtacgcaccg ggttacccac cacttccgca ttagggaaag cgcctggaaa
    17161 cgcctgcatc actttggtgg caatcttcgc cagccattta ttggttaagc ccgcaatacc
    17221 gttttgttca tgaagtacaa ccggaatgcc taacgaccac gcggccagac cacctggacc
    17281 tgatacatag ccgcccatac cgagtaccac gtcaggtttg tacgctttca taatcgcccg
    17341 cgcctgacgc caggcgttga agatacgcag cggcgcagct atcagtgctt ttataccttt
    17401 tccacgcaga ccagagatac gaatgaaatc aatttcgatg ccatgttttg gcactaagtc
    17461 cgcttccata cggtcggcag tccccagcca gcgaacttgc caaccctgag ccattagatg
    17521 gtgcgcaacc gccagtcccg ggaatacatg tccaccggtt ccgcctgcca tcaccattaa
    17581 tcgctttcct tgaccactca tcgtgaacct cgtacaaacg cctgcgcttt ctccagacgc
    17641 gtttcataat caatacgcaa cagcatcatg atggctgtcg acataatcag taagctcgaa
    17701 ccaccgtaac tgatcagcgg caatgtcaga cctttggtcg gtaacatccc cgccgccgcg
    17761 cctacgttaa ccagcgcctg gaagctaaac cagatgccaa tagaacaggc gagaaaaccg
    17821 gaaaaacggt ggtcaatttc taacgctttg cggccaatcg acatcgcgcg aaaagcgacg
    17881 aagaatacca ttaaaagtgc cagcaccaca ccgacatacc ccagttcttc gccgataatg
    17941 gcgaaaataa agtcagtgtg cgcttccggc agatactcca gtttttgtac cgagttacct
    18001 aaaccttgtc cccaaagttc gccgcgacca aacgccatca gcgattgcgt taactgatag
    18061 ccgctgccaa agggatcttc ccacgggttc cagaatgcgg taacacggcg gatacggtac
    18121 ggttcggcga gtatcagcaa cacaaccgct gaaatgccca taccgataat ggcaatgaac
    18181 tgccacaatt tcgctcccgc caggaacaac atcgccagcg tagtcacaaa caccaccacc
    18241 accgtaccaa ggtctggctg tgccagcagt aacactgcca acaccagaat cacgcccatc
    18301 ggtttcagga agccgcgcag gttattacgt acttcgtcgc ctttacgcac cagatagttg
    18361 gcgatataac aaaacagcga cagttttgtc agctccgcag gctggatacg cagcaaaccg
    18421 agatcgatcc aacgcgatgc ccctttaacc gagctcccca ctaccagcac gatcatcagc
    18481 aggatgatag atccgagcag catcgtggca ctgtagcgtt gccagaactc catcggcaga
    18541 cgcagcgtaa tgatcgccag aatgaatgcc aggatcagat agacgccatc acgcttcgcg
    18601 aagaagaacg gatcgttggt taagcgttgc cctatgggca ttgacgccga ggtcaccatg
    18661 ataaagccaa tcgccgcaag gccgaaggtc agccacagta aggtgcgatc gtacatgatc
    18721 aggctgtcgg tatctttttc ccgcgagccc atcacccagc cttttagcgc cgtggagatc
    18781 cagaccagga tactgaatcc tggcaggcgc ggcattttca ggcgagggag agataaacgc
    18841 atcaacctaa ctccttcgcc agacgggcaa actcattgcc tcgttgttca aagttcttga
    18901 actgatcaag gctggcacag gccggggaga gcagaaccat atcgcccggc tgaacacgcg
    18961 gagccagcaa gcgcatcgcc tgttccatag tttcggtttg ttctgccact tccgggcgta
    19021 gcgccgccag ctgcgcaccg tcacgaccaa aacagtacaa acgcacgttg tcgccattca
    19081 gatagcgcgc cagtggactg aagtccgccg atttaccatc gccgcccagc aacaaatgca
    19141 gcgtgccgtc tacctgcaag ccattcaacg ccgcttccgt actgccgacg ttagtggctt
    19201 tcgaatcgtt aatccagcgt acgccattgt gctccagcac cacttcaaag cgatgcggca
    19261 gaccggtgaa ggtggttaac gctttcaggc tgctggcgcg cggcaaacca gctgcgtctg
    19321 ccagtgccag tgctgccagc gcattggtgt agttatgctg cccggaaagt ttcatctctt
    19381 tcacgttcag cactttctcg cctttcactc gcagccaggt ttctccctgc tgatgattca
    19441 ggtgatagtc acccatgttg acgccaaagc tgacgcagcg ttcatcagca ccgcgaatcg
    19501 gcattgttaa ggcatcatca gcattgacga cacaaacttt cgcattttcg taaatacgca
    19561 attttgccgc acggtattgc tgcaaaccaa acggatagcg gtccatatga tcttcagtca
    19621 cgttcagaat ggtcgccgcc accgcctgta agctggaagt ggtttccagc tggaagctcg
    19681 acagttccag cacgtacagt tcgcactcag catcaagcag catcaacgct ggcaggccaa
    19741 tattgccacc cacaccaacg ttaacccccg ccgctttcgc catttcaccc actagcgtgg
    19801 tgaccgtgct tttgccgtta gaaccggtaa tcgccacaat cggtgcttgt gcttcgcggc
    19861 agaatagctc gatatcgcca acgatttcga ttccggcatc agcggcagcg cttaaggatg
    19921 gatgcgccag tgcaataccg ggactggcga caatcagatc tgccgccatc agccattcat
    19981 cattcagact gcccgtgtgg cgttctacgg cttcgggtaa tttatccagg ccaggcggtg
    20041 tcatacgcgt atccataacg cgcggcgtca caccgcgagc gaggaaaaag tccacgcagg
    20101 aaagcccggt gaggcccagg ccgataatga cgacattttt accctgataa tcagccatga
    20161 ttaacgtacc ttcagcgttg ccagaccaat cagaaccagc atcagcgaaa taatccagaa
    20221 acgcacaatg acgcgcggtt ccggccagcc tttcagttca tagtggtgat gaatcggtgc
    20281 catgcggaaa atacgttgtc cgcgcagttt aaaggagccg acctgcagga tgacagaaag
    20341 cgtttctacc acgaacacgc cccccataat caccagcagg aattcctgac gtagcagtac
    20401 ggcgataatg cctaacgcac cacctaacgc cagcgaacct acatcgccca taaagacctg
    20461 cgccggatag gtgttaaacc acaggaagcc cagtcctgcc ccgactatcg cggtacagac
    20521 aataaccagt tccccggcgt gtcgcagata cggtatgtgt aaatagctgg caaagttcat
    20581 gttgccggtc gcccacgcca ccagcgcaaa accaccggcg acaaatacgg tcggcataat
    20641 tgccaggccg tcgagaccat cggtcaggtt taccgcgttg ccagtaccca caatgacgaa
    20701 gtaagccagc agaatgtaga acagccccaa ctgcggcatc acatctttaa agaatgggac
    20761 caccagctgc gttgcgggcg tgtctttgcc ggcaaggtac agggcgaagg cgacacccag
    20821 cgcaatgacc gacatccaga aatacttcca acgagcgatc aaccctttgg tgtctttacg
    20881 caccactttg cgataatcat caacaaagcc aataacaccg taacctacca gcaccaccaa
    20941 cacgcaccag acgtacggat tggacgggta agcccacagc agtacggaga tcacaatcgc
    21001 cgtcaggatc ataatcccgc ccatggtcgg cgtaccgcgc ttgctgaagt gtgattcagg
    21061 accgtcgtta cgcaccacct gaccaaagga aagtttttgc aaatgagcaa tcatacgcgg
    21121 gcccatccac aatgagatga acagcgcggt cagcaggctg acgatggcgc gaaacgtcag
    21181 ataggaaaag acgttaaagc cggaataata tttgaccaaa tgttcggcca gccaaactaa
    21241 catgtcccat tctcctgtaa agcgcgtact acctcttcca tggcggcact acgtgaaccc
    21301 ttaactaaaa tcgtaattac ctgttgctca gcaatcagtg atttaagacg cgtaattaac
    21361 gcagttttat cagcaaaatg ttcgccaacg ccgctggcgg tgctgatagc atggctttgt
    21421 ttacccacgc ttaacacgcg gtcaatacca gcagcttttg ccgcctcgcc cacctgtaca
    21481 tggcaggctt cgctttcagc gcccagttcc gccatatcgc ccaccaccag cacgcggtag
    21541 cccggcattt cagccagtac ctgaacagcg gcggtcattg aaccgacatt ggcgttgtag
    21601 gagtcgtcga gcagcaactg gttttctgcc agttggatgg ggaacagacg gcctggaaca
    21661 gctttcagat ttgccagccc cgctttgata gcatcaagcg ttgcgcccac ggacatggag
    21721 agcgcagcgg ctgccagcgc attcgcaata ttgtgacgcc ccggcaacgg cagcagaaca
    21781 tcgacgctac cggttggggt ttgtagggta aattccgtac cgtgcgaggt cacatggata
    21841 ttggtggcgg tgaaatcgct gttggcggca ttgggtgaga aacgccacac tttgcgtgag
    21901 ccaattacgc tctgccagtt cagccagtcg ttgttgtcgg cgttcataat ggcgataccg
    21961 ttttccggca ggccgctaaa gatttcacct ttcgctttcg cgacacccgc aagcgagcca
    22021 aaaccttcca gatgcgccgc tgccaggttg ttgaccagcg cagcttccgg gcgagtcaga
    22081 ctcacagtcc aggctatttc gccctgatgg ttcgcgccaa gttcaataac tgcgtaatcg
    22141 tattccggcg ttaagcgcaa caacgtcatc ggtacaccga tgtcgttgtt gagattgcct
    22201 gccgtataaa gcgtgttgcc gcactggctt aaaatcgccg ccgtcatctc tttaacggag
    22261 gttttgccgg aggaacctgt cagagcaacc acgcgcgccg gaacttgctg gcgaacccat
    22321 gcagccagtt caccaaacgc cagacgcgta tccttgacga ttaactgcgg caggtcgata
    22381 tccagcggac ggctgaccag tagtgcgccc gcgccgccag ctttcgcctg gtcggcaaaa
    22441 tcgtgggcat caaaacgttc gcctttcagg gcaacaaaca ggcagcccgg cgtcagtttt
    22501 cgggtatcag tggttacagc atcaagggtg atatctgcac cttgcagttc accgttgaga
    22561 atgtcggtaa gttggctaag ggttacgcta atcatgcaat cacccccagc agacgcgcca
    22621 ccgtgacgcg atcggagtag tccagacgct gattgccaac aatctggtaa tcttcatggc
    22681 ctttgcccgc gaccagcacc acatcgttct ctttagcctg cataacggcg caagtcaccg
    22741 cttcagcacg gccttccatc actttggcat gtccggcatc taacattccc gccagaatat
    22801 cgttgatgat ggcacgcggt tcttcggtac gcgggttatc gtccgtcacc accgccacgt
    22861 cagcaaactc ttcggcaatt gcgcccatca gtggacgctt acctttatcg cgatcgccac
    22921 cacagccaaa gacacaccac agcttgcccg cacagtgcag acgcgccgcc tgtaaggctt
    22981 tttccagtgc atccggcgta tgcgcgtaat ccaccaccac cgtcggtttg cctggcacag
    23041 tgaacacttc catacgtccg caaaccggtt gcagacgcgc ggcggttttc aacagatcag
    23101 ccaatggata gccgagtgcc aacagtgtcg ccagcgcgag cagcaggttg ctgacgttaa
    23161 aagcgcctat cagatggctt tcaatttcgc catcgcccca acttgagcta aagcgaatcg
    23221 tcacaccgct gtcgtgatag ttcacgtcga tcacttttaa ccagcgtccg tgacagttcg
    23281 gattaatatg atcttccatt gataccgcaa ccgcgtccgg cagctttgcc agccaacggc
    23341 ggcccacttc atcgtcggcg ttaataatcg cctgaccgca atgatgttca gaataaagca
    23401 gccatttcgc agcttcgtag tgttccatat caccatgata atcaaggtga tcgcggctta
    23461 agttggtaaa gaccgacgcc gcaaatttca atgccgccac acggtgctgt accagcccgt
    23521 gggaggaaac ttccattgcg caaaacgtcg cgccctgctc caccagcccc gccagctcat
    23581 gctgaacatc gactgccgaa ccggtggtat tttctgtcgg gatcactttc cccagcagac
    23641 cgttaccaac ggtgcccatt accgcgctgg tttcgccaag cagttggctc cactgcgcca
    23701 gcagctgggt agtcgtggtt ttgccgttgg tgcccgttac gcctacgaga cgtaaattgt
    23761 cagagggttc atggtaaaag cggcccgcca gtgcagataa acgctcgttg agctggctga
    23821 gatagatgac cggtacgccg tgcatttcac ggatttcacc gtcggtcgcc tcatctttcg
    23881 cctctgcaat aatggcagcc acaccttgcg ctatcgcctg cgggatatat cgacgcccgt
    23941 ccgcctgatg acctactaca gctacaaaga gatcgcccgc cgcagccaca cggctgtcga
    24001 gtgtcatctc tcgcagtgct cgcgaaggtg cgtctggcac ccacggagca agaaggtcgc
    24061 gcaaattacg atctgccacc tgtcccctcg ccttgattaa tcacaaattc atttttatcg
    24121 cccgttgtca gcgcatccgg ctcgatgttc atggtacgca atacgccgcc catgatggca
    24181 ccaaagaccg gcgcggaaac ggcgccgccg tagtatttac ccgcctgcgg atcgttgata
    24241 acaacaacca gcgcgaagcg cggctgactc gcaggcgcaa cgcctgcggt ataagcaata
    24301 tatttattga tgtagcgacc gtccggcccg acctttttcg cggtaccggt tttaatggcg
    24361 atacgatagc ctttaatcgc cgccttcacg ccgccgccgc ccggtagcgc cacgctttcc
    24421 atcatatgca ccacggtgcg gacaatggat tccgggaaga cacgttcacc gggaaccggg
    24481 gggtcaactt tggtaatcga cagtgggcga taaatgccgt agctgccgat agttgcgtag
    24541 actcgcgcta actgtaacgg tgttaccatt agcccgtagc cgaaagagaa ggtggccctc
    24601 tctatgtcag accaccgttg tttttgagga tataagccac tgcgttctcc gaccaacccc
    24661 aaattggtcg cttttcccag tccaaaacgt gagtaagtat ctactaacgc tgaggacggc
    24721 atcgctaacg ccagcttgga aacaccgacg ttactcgact tctgtaatac cccggtcagg
    24781 gttaattcgc tgtagcgtgc cacgtctttg atttcgtggc cgttaattcg ataaggaatg
    24841 gtattgagta ccgagttttc ccgcaccacg ccacgttgca acgcggtcat caccaccatc
    24901 ggtttaaccg ttgagcccgg ttcaaacacg tcggtgatgg tacggttacg catcgcctct
    24961 ttcggcgtgc cgctcagatt gttagggttg tatgacgggc tgttagccat cgccagcact
    25021 tcacctgtgt tgacatccac cagcacggcg ctaccagatt cagccttgtt aaaggccacc
    25081 gcgttgttca gttcgcgata aaccagcgcc tgcaggcgtt catcaatact cagcgccagg
    25141 ttgtgcgctg cctggctgtc agtagaagaa atatcttcaa ttacgcgacc atagcggtct
    25201 ttacgcacaa tgcgctcacc cggctgcccg gtaagccatt tatcgaaact cttctcaacg
    25261 ccctcaatcc cttgactatc gacgttagta aagccaatga ggtgagcagt cacttcgccg
    25321 gatggataat aacggcgaga ttcttcacgc agatgaatac ccggcagttt cagttttttg
    25381 atgtagtccg ccatgtcagg gtttacctga cgcgccagat aaataaagcg ccctttcggg
    25441 ttggcgttaa tgcgggcaga aagctgatcc agcggaatat tgagcgcgtt agccagcgcc
    25501 ttccagcggt caccgacgct gataccgcca gcgtcatgca cttctttcgg gtcagcccaa
    25561 atcgctttta ccggcacgct caccgctaac gggcgaccag aacggtcagt aatcatgccg
    25621 cgggaggtgg aaacttgctg aacgcgaaga gaacgcatgt cgccctcttt caccagcata
    25681 tccggggaga taacttgtaa ccacgctacg cgtccgagca gaaaagccag cgccaggaga
    25741 atacagccgc ataacaacgc aaaacgccaa ctaataaagt tggcatgttc ttcctgacgt
    25801 tttggtttct gcgttttcgc cgctgctttc atgcgtcgcg tttatcctta tttttgcact
    25861 acgatatttt cttgtgacgg atcaacatgc tgcatttgca gcttttccgt ggcgatcctt
    25921 tccacccggc tatggtcgcc gagcgcattc tcttcaagga tcaggttgcg ccattcaatg
    25981 tctaaagcat ctcgctccag caccagttgt tcgcgctgag cggtcagtaa acgggtatgg
    26041 tgcgccgtgg ttaccacggt caccgccgtc aaaataatgc aaatgaacag gcagagtggc
    26101 agcttcccaa atcgcaaaag atcgtcaccg ataacaccag gcaatgcatg gcgctcgtgg
    26161 cttcccatcg atcctttaac tttgcttaga gcttctgtca ctctgctgat catgcgttcg
    26221 tcctctctgc gatacgcaga actgaactac gggcacgagg attctcagcc acctcttctt
    26281 cgcccggcat taacttgcct aatgctcgca gctgacggcc acccagtttt ttgagctgct
    26341 cttcagtcat cggtaaccct gccggaactt gcggaccgcg gctgttttca cgcataaaac
    26401 gtttcacaat acggtcttcc agcgagtgga agctgatgat cgaaagccgc ccacccgggg
    26461 ccagcacgtt gagcgagctt tttagcgcct gctctatctc ctccagttca ctgtttaccc
    26521 aaatgcgcac cgcctggaag gtacgggtcg cgggatgttt aaacttatct ttcaccggcg
    26581 ttgcagcagc cacgacttcc gccagttctt tggtgcgggt catcggctgt tcgcggttac
    26641 gctcgacaat ggcgcgggca atgcgtttgg caaaacgctc ttcaccatag gttttcaata
    26701 cccaggcgat atcggcttct tctgcggttt gtagccattc agcggctgac tgcccacggg
    26761 ttgggtccat acgcatgtcc agcggaccat cgcgcataaa ggaaaagcca cgttcagcat
    26821 catcaagttg cggtgaagag acgccaagat cgaggagaat gccgtcgatc ttgccgataa
    26881 gatcgcgctc ggcaacgtat tcgcccagcg cggagaaagg tccgtggatg atggagaagc
    26941 gcggatcatc aatagtcttc gcaacggcga tagcctgcgg gtcgcgatcg atcgccagca
    27001 aacgcccctc ttcgccaagc tgcgagagga tcagacgtga gtgaccaccg cgaccaaaag
    27061 tcccatcaat gtagatgcca tcaggacgga tattgaggcc attaacggct tcatccagca
    27121 gcaccgtagt atgtttatag ttttccatca ttttatagag acaagtcctg cagtcgctcc
    27181 gataagtctc cagtagccaa ctgctctgcg tcgatatctt ccttgacctg ttgatgccaa
    27241 gttgtttcat cccacagctc aaacttgttg aactgtccaa ccagcatcac ttcttttgtc
    27301 agcccggcat gttgccgcag tactggcgcg attaacaatc gacctgcgcc atccatctga
    27361 cattcgctgg catgacctaa cagtaggcgc tgcacacggc gctcaactgg gttcatgctc
    27421 gacagacgcg ataatttttg ctcgataatt tcccattcag gcagggggta aagcagcagg
    27481 cacgggtgat gaatgtcaat ggtgcaaacc atttgaccgg cagcgttctc aagcagctgt
    27541 tcccgataac gggtaggcac tgataagcgc cctttgctgt cgagattgac taacgttgct
    27601 ccccggaaca tgccagcctc accccttatt cccactttgc cccacaattt cccactgaaa
    27661 ggagtttacg gagcggagga aaagcttgtc aagccagtca caaggcatac cgaggtaaaa
    27721 aacccgatgt ttacggctaa tatcagcgtt gtttatttta cgtccaacgc gcgaagcaaa
    27781 ttaacgttat gaatagctgt aagaaaaaat ccctcatcgt catcactgtt ttaaaatgac
    27841 tcactatttt ccacagcaaa tataaagtgt cagtttgcga cgcgagcggc attttaggac
    27901 atatcttccc cggttaacag tccttgttac gtctgtgtgg cgcttgatgc cagcgggttt
    27961 gcgcaaaagc aaagaaaagt gtttgttaaa tcggcaattc atcgccgcat gtaacaaaat
    28021 aatgcaaaaa cgcgctgtcg atatcactta attattgtga atttcagctg gtgagttaat
    28081 taacgggcgg gtttaaaacc atttatcaat aatagtcagg aatagtctta tttactttaa
    28141 gcatattgat gtccagtccc gtactctacg cgccagaggg aaattcacct ggcgcgtatt
    28201 tttgttcgcg gcttagctac ggctgagcac accgcggcga tagagattac gtttaatgcg
    28261 cgttaaacca ggttttggct tacgcggttc gtccaggctt gccaggacaa tctccagcac
    28321 acgctctgcg acatcgcggt gacgttgagc cactgccagc accgggcact gtaagaagtc
    28381 gagcagttcg ttatcgccaa aggtggcaat tgccaggtca gaaggcagtt taccatcgcg
    28441 acgtagcgtg acatccatca ccccttgcaa caacgcaaac gacgttgtga acagcgcctg
    28501 cggcatcaga tgcgtttcca gccatttttc gaataactgg gcagccgcct cccgctcata
    28561 gctgttggca tacaggaaat gcacttcgcg cggatcatct ttccaggcag tacggaaacc
    28621 ttgttcacgc aggaagctga cagaaagctc cggcagcgcg ccaagataaa gcaccgtctc
    28681 ggcgggaaac ttacgtaact cttccgccag catttcggca tcatcctgat cggcaccaac
    28741 cacgctggtg aaatgttcac gatcgagggc gcggtccagc gcgacaatcg ggaacggggc
    28801 gttagcccag cgttgataaa aaggatgctc aggtggcaac gacgtcgaaa caataatggc
    28861 atcaacctga cgctgtaaaa ggtgctcaat gcagcgcatt tcgttgtctg gctgatcttc
    28921 tgagcaggca atcagcagtt gataaccccg ttgccgcgcc tggcgctcaa gatagttagc
    28981 gatgcgggta tagctggtgt tctccagatc ggggatcaca agaccaatag aacgtgtgcg
    29041 tccagcacga agcccagctg ccacggcgtt cgggtggtaa ttgtgctcac gcaccacagc
    29101 catgactttt tcaacggttt tgtcgctcac acggtattgc ttcgctttgc cgttaataac
    29161 atagcttgca gtggtccgcg acactcccgc cagccgagcg atttcatcca gtttcacaat
    29221 tgccccttgc gtaaaatgta aaaaccatag ccattgtact ggtatgggtt aaattcatta
    29281 acatctaagc gcagaaaatt aactgcggca actgctttta ttccaggttc ccactgattt
    29341 cgcaaaaaaa gcccagcgtg acatgttggg ctgcaaattg cacactgaga tcattctcaa
    29401 cgcattattt tatcgccgcg cgaaagtccg accacaccag agcgagcaac ttccacaatt
    29461 ttcgccacct cgcgaatcga tgctaaaaat gcatcaagct tatcgctggt gcctgctaat
    29521 tgaacggtat aaagcgaggg ggtgacatcg ataatttgcc cacggaatat ttccgtatta
    29581 cgtttcactt cgtcacgccc gtaaccgctg gcctgaattt tcaccagcat aatttcccgc
    29641 tcaacatgcg cgccctgccc caactcactc acgcgcaaga catcgaccag cttgtgtaat
    29701 tgcttttcga tctgctcaag tactttttca tcgcccacgg tctggatggt catacgcgat
    29761 aatgtcggat cgtcggttgg cgcaacggtc aggctttcaa tgttgtagcc tcgctgggaa
    29821 aaaaggccaa tcacgcggga taacgcgcct gattcatttt cgagtaagac tgataatatc
    29881 cggcgcataa tcaggttctc tccgttttgc ttaaccacat ttcatccatt ccgcccccgc
    29941 gaatctgcat cgggtagacg tgctcactgc catcgacggt aacatcaaca aacaccaggc
    30001 gattattgcg cacctgttcc agcgcctcgc taagtttgct ttccagctca tgcggatgag
    30061 agatctggat cccgacgtga ccataggctt ccgccagacg gacgaaatcg ggtagtgatt
    30121 gcatataaga ttgtgaatga cggccggaat agatcatgtc ctgccactgt ttcaccatcc
    30181 ccagatagcg gttattgaga ttcaccacca gtacgggcaa ctcgtattgc aacgcggtag
    30241 acagttcctg aatgttcatc tgaatactgc cgtcgccagt gacgcaaacc acggtttctt
    30301 ctggcaacgc cattttgacg cccagtgccg caggtaaacc aaaacccatc gtgccgaggc
    30361 caccggaatt gatccagcga cgcggtttgt cgaatggata ataaagtgca gcaaacatct
    30421 ggtgctgccc gacatcggac gtcacgtaag cgtctccctt cgtcaaccgc caaagagtct
    30481 cgatcaccgc ctgcggttta atcttttcac tgtgagtgtc atatttcagg cactgacgag
    30541 cgcgccactg ttcaatttgc tgccaccagt cgcggatctc atccagtggt tgatgggcgg
    30601 attcttgcga caagagttca agcatttgtt cgaggacctg gcgagcatcc cccacaatcg
    30661 ggatatccgc agtcacggtt ttagaaatgg aagtaggatc aatatcgata tgcagaacag
    30721 tggcatttgg gcagtacttt gccagattgt tcgtcgttcg gtcatcaaat cgtaccccga
    30781 cggcgaaaat cacatccgcg ttatgcatcg tcatattggc ttcgtaggta ccgtgcattc
    30841 ccagcatgcc cagtgcctga cgatgcgttg ccggaaacgc ccccagcccc atcaatgagg
    30901 aaacaacggg cagattcaac gcctccaccg tttctttcaa ctgctgatgg cagcccgcca
    30961 tgattgcccc accgcctacg tagacaaccg gtttttttgc cactaccagc gtttgcagag
    31021 cacgcttaat ttgcccttta tgtccggtag tagtgggatt gtaagaacgc atactgaccg
    31081 actccggcca gacatagggt aatttgttcg ccggattaag aatatctttc ggtaaatcaa
    31141 cgactactgg tccaggacga ccacttgccg ccagccagaa agcctttttc agcacctgcg
    31201 gaatgtcttc cgtttgctta accagaaaac tgtgtttaac cactggtcgc gaaatcccca
    31261 ccatgtcgca ctcctgaaag gcatcgtaac ctatcaacga ggtcgctacc tgcccggaaa
    31321 ggacaactaa tggaatggaa tccatataag cggtggcgat gccggtaatc gcattggtcg
    31381 cccctggacc cgacgttacc agcacgacgc cgacttcccc ggtcgcgcgc gccagaccat
    31441 cggccatatg cactgccgcc tgctcatgac gaactaaaac atgatcgata ccacccacgg
    31501 tatgcaatgc atcgtaaata tcaaggactg cgcctccagg ataaccgaat acttgtttaa
    31561 cgccctgatc gataagcgat cggacgacca tctcggctcc agacaacatc tccatggcct
    31621 gcctcactgt ttgatggaaa aaatgtgtaa aacacattaa ccgtccgatc ttgcttaagc
    31681 aattggcagc cagagacata aacgcagggt aataagaata aacaggagga aagatgaaaa
    31741 gaaacgataa aatcctccat tacgaaggat taaattgata ataaatcggc tgaatcccac
    31801 aacttacagc aatttctcta tttttttaat taatcctaaa atagagagcc cacacattca
    31861 gaataaaatt ctacattcaa taaaaaatgc agaataaacc agacattcat gtctgaccta
    31921 ttctgcattc agttagcgtt tgcaaattga gactaattgt tcttccatcc actgatggcc
    31981 tttatcgcgc ccggcagctt catgccatga gagataacag gttctgctgt tttgttttaa
    32041 cggcagcggt aatacctgta attctaagga ttcagcgaac tcttcagcca gccaacgcgg
    32101 cgcaatagcg accaaatgcg tttgcgacac cacgctaagt acgctcatca ttgccatgcc
    32161 ctgatacgcg atactggctt gcttatctac cgtgtcatac caaggttgac taaatgacgc
    32221 gaaacgatcg agcgaaaccg ccgcatgttg ttcgttataa acatcatgtt tcagtaacgg
    32281 gcctttaatt gttggatgat ttttgctggc taccagcacc atttcatctt taaataatgg
    32341 cacgctggta aattcaggac gatggaagtc ttcataacta atcacaaact ccgtttcctg
    32401 ataacgcagc tgatgttcag tgttctgatt taatgaagac ttgaacataa catgtatatt
    32461 tggcgcaatc tgctcaatgt gattataaat ctgcgaggtc agaatgctgt ctaacgggct
    32521 gcaaacacaa agatgaaata cacgttcact actcgcgggt tcaaaacctg aaccaggcaa
    32581 ttcattttgt actagttgca atgcctggcg aactgaacca aaaagttgaa atgcgcgagc
    32641 agtcggttga ataccacggc cataacgaac aaaaagctcg tcattaaaca tcaccttcag
    32701 gcgtgcaaca gcgttactga ccgcaggttg cgacataccc agaacatgag cggcacgggt
    32761 aatgttttgc tcctgcatca cggcatcgaa aacggttaat aagttgagat cgaccatgcg
    32821 tagctgtggc ttgcttaact ccgccgtctc tgaatgatct gtttgtacct ctggcatact
    32881 taactccact gtcacactta actccctttc ccttattgga atgcagagaa ataatcctga
    32941 agaatatgat ttatc
//
LOCUS       DADMJE010000029        32797 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.030, whole genome shotgun sequence.
ACCESSION   DADMJE010000029 DADMJE010000000
VERSION     DADMJE010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32797
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.030"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..110)
                     /locus_tag="JN001_001220"
     CDS             complement(<1..110)
                     /locus_tag="JN001_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY9052520.1"
                     /translation="MSGKPAARQGDMTQYGGSIVQGSAGVRIGAPTGVACS"
     gene            complement(350..556)
                     /locus_tag="JN001_001221"
     CDS             complement(350..556)
                     /locus_tag="JN001_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbfA family protein"
                     /protein_id="HAY9052521.1"
                     /translation="MELYREYPAWLIFLRRTYAVAAGVLALPFMLFWKDRARFYSYLH
                     RVWSKTSDKPVWMEQAEKATGDFY"
     gene            869..958
                     /gene="kdpF"
                     /locus_tag="JN001_001222"
     CDS             869..958
                     /gene="kdpF"
                     /locus_tag="JN001_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit F"
                     /protein_id="HAY9052522.1"
                     /translation="MSAGVIAGVLLVFLLLGYLVYALINAEAF"
     gene            958..2631
                     /gene="kdpA"
                     /locus_tag="JN001_001223"
     CDS             958..2631
                     /gene="kdpA"
                     /locus_tag="JN001_001223"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706533.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HAY9052523.1"
                     /translation="MAAQGFLLIATFLLVLMVLARPLGSGLARLINDIPLPGTAGVER
                     ILFRLPGVSDHEMNWKQYLCAILGLNMLGLAVLFFMLLGQHYLPLNPQQLPGLSWDLA
                     LNTAVSFVTNTNWQSYSGETTLSYFSQMAGLTVQNFLSAASGIAVIFAFIRAFTRQSM
                     STLGNAWVDLLRITLWVLVPVALLIALFFIQQGALQNFLPYQAVNTVEGAQQLLPMGP
                     VASQEAIKMLGTNGGGFFNANSSHPFENPTALTNFVQMLAIFLIPTALCFAFGEVTGD
                     RRQGRMLLWAMSVIFVICVGVVMWAEVQGNPHLLALGADSSINMEGKESRFGVLVSSL
                     FAVVTTAASCGAVIAMHDSFTALGGMVPMWLMQIGEVVFGGVGSGLYGMMLFVLLAVF
                     IAGLMIGRTPEYLGKKIDVREMKLTALAILVTPTLVLMGAALAMMTDAGRSAMLNPGP
                     HGFSEVLYAVSSAANNNGSAFAGLSANSPFWNCLLAFCMFVGRFGVIIPVMAIAGSLV
                     SKKSQPASSGTLPTHGPLFVGLLIGTVLLVGALTFIPALALGPVAEYLS"
     gene            2654..4702
                     /gene="kdpB"
                     /locus_tag="JN001_001224"
     CDS             2654..4702
                     /gene="kdpB"
                     /locus_tag="JN001_001224"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HAY9052524.1"
                     /translation="MSRKQLALFEPTLVVQALKEAVKKLNPQAQWRNPVMFIVWIGSL
                     LTTCISIAMASGAMPGNALFSAAISGWLWVTVLFANFAEALAEGRSKAQANSLKGVKK
                     TAFARKLREPKYGAAADKVPADQLRKGDIVLVEAGDIIPCDGEVIEGGASVDESAITG
                     ESAPVIRESGGDFASVTGGTRILSDWLVIECSVNPGETFLDRMIAMVEGAQRRKTPNE
                     IALTILLIALTIVFLLATATLWPFSAWGGNAVSVTVLVALLVCLIPTTIGGLLSAIGV
                     AGMSRMLGANVIATSGRAVEAAGDVDVLLLDKTGTITLGNRQASEFIPAQGVDEKTLA
                     DAAQLASLADETPEGRSIVILAKQRFNLRERDVQSLHATFVPFTAQSRMSGINIDNRM
                     IRKGSVDAIRRHVEANGGHFPADVDQKVDQVARQGATPLVVVEGSRVLGVIALKDIVK
                     GGIKERFAQLRKMGIKTVMITGDNRLTAAAIAAEAGVDDFLAEATPEAKLALIRQYQA
                     EGRLVAMTGDGTNDAPALAQADIAVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVHIGK
                     QMLMTRGSLTTFSITNDVAKYFAIIPAAFAATYPQLNALNIMRLHSPDSAILSAVIFN
                     ALIIVFLIPLALKGVSYKPLTASAMLRRNLWIYGLGGLLVPFIGIKVIDLLLTVCGLV
                     "
     gene            4711..5254
                     /gene="kdpC"
                     /locus_tag="JN001_001225"
                     /pseudo
     CDS             4711..5254
                     /gene="kdpC"
                     /locus_tag="JN001_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308751.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
     gene            5247..7931
                     /gene="kdbD"
                     /locus_tag="JN001_001226"
     CDS             5247..7931
                     /gene="kdbD"
                     /locus_tag="JN001_001226"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     KdbD"
                     /protein_id="HAY9052525.1"
                     /translation="MNNEPLRPDPDRLLEQTAAPHRGKLKVFFGACAGVGKTWAMLAE
                     AQRLRAQGLDIVVGVVETHGRKDTDAMLEGLAVLPPKRLAYRGRHICEFDLDAALARR
                     PALILMDELAHSNALGSRHPKRWQDIEELLEAGIDVFTTVNVQHLESLNDVVSGVTGI
                     QVRETVPDPFFDAADDVVLVDLPPDDLRQRLKEGKVYIAGQAERAIEHFFRKGNLIAL
                     RELALRRTADRVDEQMRAWRGHPGEEKVWHTRDAILLCIGHNTGSEKLVRAAARLASR
                     LGSVWHAVYVETPALHRLPEKKRRAILSALRLAQELGAETATLSDPAEEKAVVRYARE
                     HNLGKIILGRPASRRWWRRETFADRLARIAPDLDQVLVALDEPPARTINNAPDSRSFK
                     DKWRVQIQGCVVAAALCAVITLIAMQWLMAFDAANLVMLYLLGVVVVALFYGRWPSVV
                     ATVINVVSFDLFFIAPRGTLAVSDVQYLLTFAVMLTVGLVIGNLTAGVRYQARVARYR
                     EQRTRHLYEMSKALAVGRSPQDIAATIEQFIASTFHARSQVLLPDDNGKLQPLTHPQG
                     MTPWDDTIAQWSFDKGLPAGAGTDTLPGVPYQILPLKSGEKTYGLVVVEPGNLRQLMI
                     PEQQRLLETFTLLVANALERLTLTASEEQARMASEREQIRNALLAALSHDLRTPLTVL
                     FGQAEILTLDLASEGSPHARQASEIRQHVLNTTRLVNNLLDMARIQSGGFNLKKEWLT
                     LEEVVGSALQMLEPGLSSPINLSLPEPLTLIHVDGPLFERVLINLLENAVKYAGAQAE
                     IGIDAHVEGENLQLDVWDNGPGLPPGQEQTIFDKFARGNKESAVPGVGLGLAICRAIV
                     DVHGGTITAFNRPEGGACFRVTLPQQTAPELEEFHEDM"
     gene            7928..8605
                     /gene="kdpE"
                     /locus_tag="JN001_001227"
     CDS             7928..8605
                     /gene="kdpE"
                     /locus_tag="JN001_001227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator KdpE"
                     /protein_id="HAY9052526.1"
                     /translation="MTNVLIVEDEQAIRRFLRTALEGDGMRVYEAETLQRGLLEAATR
                     KPDLIILDLGLPDGDGIEFIRDLRQWSAVPVIVLSARSEESDKIAALDAGADDYLSKP
                     FGIGELQARLRVALRRHSATAAPDPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFHLL
                     AVLLNNAGKVLTQRQLLNQVWGPNAVEHSHYLRIYMGHLRQKLEQDPARPRHFITETG
                     IGYRFML"
     gene            complement(8821..9078)
                     /locus_tag="JN001_001228"
     CDS             complement(8821..9078)
                     /locus_tag="JN001_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052527.1"
                     /translation="MQKPLPVRWLIIQGLTENEHCGIQAYACNTESQEDLYAEVPLVG
                     RLTGIEEVKVEAIAMSKLHNMSCPPYMGHSAAVIFHLIYLS"
     gene            9201..11399
                     /gene="speF"
                     /locus_tag="JN001_001229"
     CDS             9201..11399
                     /gene="speF"
                     /locus_tag="JN001_001229"
                     /EC_number="4.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase SpeF"
                     /protein_id="HAY9052528.1"
                     /translation="MSKLKIAVSDSCPDCFTTQRECIYINESRNIDVAAIVLSLNDVT
                     CGKLDEIDATGYGIPVFIATENQERVPAEYLPCISGVFENCESRREFYGRQLETAASH
                     YETQLRPPFFRALVDYVNQGNSAFDCPGHQGGEFFRRHPAGNQFVEYFGEALFRSDLC
                     NADVAMGDLLIHEGAPCIAQQHAAKVFNADKTYFVLNGTSSSNKVVLNALLTPGDLVL
                     FDRNNHKSNHHGALLQAGATPVYLETARNPYGFIGGIDAHCFEESYLRELIAEVAPQR
                     TKEARPFRLAVIQLGTYDGTIYNARQVVDKISHLCDYILFDSAWVGYEQFIPMMADCS
                     PLLLDLNENDPGILVTQSVHKQQAGFSQTSQIHKKDSHIKGQQRYVPHKRMNNAFMMH
                     ASTSPFYPLFAALDINAKMHEGVSGRNMWMDCVVNGINARKLILDNCQHIRPFVPELV
                     DGKPWQSYETAQIAVDLRFFQFVPGEHWHSFEGYAENQYFVDPCKLLLTTPGFDARNG
                     EYEAFGVPATILANFLRENGVVPEKCDLNSILFLLTPAEDMAKLQQLVALLVRFEKLL
                     ESDAPLAEVLPSIYKQHEERYAGYTLRQLCQEMHDLYARHNVKQPQKEMFRKEHFPRV
                     SMNPQEANYAYSRGEVELVRLPDAEGRIAAEGALPYPPGVLCVVPGEIWGGAVLRYFS
                     ALEEGINLLPGFAPELQGVYIEEHDGRKQVWCYVIKPRDAQSTLLKGEKL"
     gene            11396..12734
                     /gene="potE"
                     /locus_tag="JN001_001230"
                     /pseudo
     CDS             11396..12734
                     /gene="potE"
                     /locus_tag="JN001_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415219.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine-ornithine antiporter"
     gene            12762..12959
                     /locus_tag="JN001_001231"
                     /pseudo
     CDS             12762..12959
                     /locus_tag="JN001_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001405579.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            13083..13733
                     /locus_tag="JN001_001232"
     CDS             13083..13733
                     /locus_tag="JN001_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001208812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2625 domain-containing protein"
                     /protein_id="HAY9052529.1"
                     /translation="MREMNQLVNTEDSAWPIIQNWLKDATNHTELLPVNKNLAETALY
                     QLQVTTKSPMGALVYGSGGLLIDNGWLRIAGSGHPRLPRDPVSWTQRPEFAGVRALPI
                     ADDVAGGIFALNGGDLGEDTGCVYYFAPDTLNWESLEVGYSEFLQWALSGDLDTFYEN
                     VRWQQWREDVIKLSATEAFTFYPFLWVQSEEARTRKVISLTELWEMQYQMKETFTQ"
     gene            complement(13774..14268)
                     /locus_tag="JN001_001233"
     CDS             complement(13774..14268)
                     /locus_tag="JN001_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052530.1"
                     /translation="MKTNRSLVVIVSLITATLLLTACAQPEQSSLAGDWLLTPKDKTR
                     RLTGSIAVNIAPSRCKTNCRGDNLPDNTRRWQLSGGNEKELTYLHNMSAQEKVGLNPG
                     WQCYTSFFMRVCQGKPGTRPIVNEDYVSESGFFGSMMHVGIIELRRCQSENCQQELKA
                     INTH"
     gene            complement(14483..16123)
                     /gene="pgm"
                     /locus_tag="JN001_001234"
     CDS             complement(14483..16123)
                     /gene="pgm"
                     /locus_tag="JN001_001234"
                     /EC_number="5.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-D-glucose phosphate-specific
                     phosphoglucomutase"
                     /protein_id="HAY9052531.1"
                     /translation="MAIHNRAGQPAQQSDLINVAQLTAQYYVLKPEAGNAEHAVKFGT
                     SGHRGSAARHSFNEPHILAIAQAIAEERAKNGITGPCYVGKDTHALSEPAFISVLEVL
                     AANGVDVIVQENNGFTPTPAVSNAILVHNKKGGPLADGIVITPSHNPPEDGGIKYNPP
                     NGGPADTNVTKVVEDRANALLADGLKGVKRISLDEAMASGHVKEQDLVQPFVEGLADI
                     VDMAAIQKAGLTLGVDPLGGSGIEYWKRIGEYYNLNLTIVNDQVDQTFRFMHLDKDGA
                     IRMDCSSECAMAGLLALRDKFDLAFANDPDYDRHGIVTPAGLMNPNHYLAVAINYLFQ
                     HRPQWGKDVAVGKTLVSSAMIDRVVNDLGRKLVEVPVGFKWFVDGLFDGSFGFGGEES
                     AGASFLRFDGTPWSTDKDGIIMCLLAAEITAVTGKNPQEHYNELAKRFGAPSYNRLQA
                     AATSAQKAALSKLSPEMVSASTLAGDPITARLTAAPGNGASIGGLKVMTDNGWFAARP
                     SGTEDAYKIYCESFLGEEHRKQIEKEAVEIVSEVLKNA"
     gene            complement(16149..16694)
                     /gene="seqA"
                     /locus_tag="JN001_001235"
     CDS             complement(16149..16694)
                     /gene="seqA"
                     /locus_tag="JN001_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation negative regulator SeqA"
                     /protein_id="HAY9052532.1"
                     /translation="MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSAASQPAAP
                     VTKEVRVASPAIAEAKPVKTIKDKVRAMRELLLSDEYAEQKRAVNRFMLLLSTLYSLD
                     AQAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNTNTGRKCSMI
                     EHIMQSMQFPAELIEKVCGTI"
     gene            16879..17643
                     /gene="ybfF"
                     /locus_tag="JN001_001236"
     CDS             16879..17643
                     /gene="ybfF"
                     /locus_tag="JN001_001236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY9052533.1"
                     /translation="MKLNIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHN
                     IIQVDMRNHGLSPRDPVMNYPAMAQDLVDTLDAQQIDKATFIGHSMGGKAVMALTALA
                     RDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVIQ
                     FLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWDHPALFIPSGNSPYVSEQYRDDLL
                     AQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYLND"
     gene            17714..18076
                     /gene="ybfE"
                     /locus_tag="JN001_001237"
     CDS             17714..18076
                     /gene="ybfE"
                     /locus_tag="JN001_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA regulated protein"
                     /protein_id="HAY9052534.1"
                     /translation="MYYGALSIRAEAWLIVSPEVTKIMAKEQTDRTTLDLFAHERRPG
                     RPKTNPLSRDEQLRINKRNQLKRDKVRGLKRVELKLNAEAVEALNELAESRNMSRSEL
                     IEEMLMQQLAALRSQGIV"
     gene            18216..18746
                     /gene="fldA"
                     /locus_tag="JN001_001238"
     CDS             18216..18746
                     /gene="fldA"
                     /locus_tag="JN001_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin FldA"
                     /protein_id="HAY9052535.1"
                     /translation="MAITGIFFGSDTGNTENIAKMIQKQLGKDVADVHDIAKSSKEDL
                     EAYDILLLGIPTWYYGEAQCDWDDFFPTLEEIDFNGKLVALFGCGDQEDYAEYFCDAL
                     GTIRDIIEPRGATIVGHWPTAGYHFEASKGLADDDHFVGLAIDEDRQPELTAERVEKW
                     VKQISEELHLDEILNA"
     gene            18956..19042
                     /gene="uof"
                     /locus_tag="JN001_001239"
     CDS             18956..19042
                     /gene="uof"
                     /locus_tag="JN001_001239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001491546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fur leader peptide"
                     /protein_id="HAY9052536.1"
                     /translation="MIRIISRANSVTSSNEVNRLVTGQIPHD"
     gene            19035..19481
                     /gene="fur"
                     /locus_tag="JN001_001240"
     CDS             19035..19481
                     /gene="fur"
                     /locus_tag="JN001_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HAY9052537.1"
                     /translation="MTDNNTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLI
                     DMGEEIGLATVYRVLNQFDDAGIVTRHNFEGGKSVFELTQQHHHDHLICLDCGKVIEF
                     SDDSIEARQREIAAKHGIRLTNHSLYLYGHCAEGDCREDEHAHEGK"
     gene            complement(19566..19892)
                     /locus_tag="JN001_001241"
     CDS             complement(19566..19892)
                     /locus_tag="JN001_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052538.1"
                     /translation="MKKLILIAIMASGLVACAQSTAPQEDSRLKEAYSACINTAQGSP
                     EKIEACQSVLNVLKKEKQHQHFADQESVRVLDYQQCLRATQTGNDQAVKADCDKVWQE
                     IRSNNK"
     gene            complement(19942..21348)
                     /gene="chiP"
                     /locus_tag="JN001_001242"
     CDS             complement(19942..21348)
                     /gene="chiP"
                     /locus_tag="JN001_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitoporin"
                     /protein_id="HAY9052539.1"
                     /translation="MRTFSGKRSTLALAIAGVTAMSGFMAMPEARAEGFIDDSTLTGG
                     IYYWQRERDRKDVTDGDKYKTNLSHSTWNANLDFQSGYAADMFGLDIAVFTAIEMAEN
                     GDSSHPNEIAFSKSNKAYDEDWSGDKSGISLYKAAAKFKYGPVWARAGYIQPTGQTLL
                     APHWSFMPGTYQGAEAGANFDYGDAGALSFSYMWTNEYKAPWHLEMDEFYQNDKTTKV
                     DYLHSLGAKYDFKNNFVLEAAFGQAEGYIDQYFAKASYKFDIAGSPLTTSYQFYGTRD
                     KVDDRSVNDLYDGTAWLQALTFGYRAADVVDLRLEGTWVKADGQQGYFLQRMTPAYAS
                     SNGRLDIWWDNRSDFNANGEKAVFFGAMYDLKNWNLLGFAIGASYVYAWDAKPATWQS
                     NPDAYYDKNRTIEESAYSLDAVYTIQDGRAKGTMFKLHFTEYDNHSDIPSWGGGYGNI
                     FQDERDVKFMVIAPFTIF"
     gene            complement(21795..23459)
                     /gene="glnS"
                     /locus_tag="JN001_001243"
     CDS             complement(21795..23459)
                     /gene="glnS"
                     /locus_tag="JN001_001243"
                     /EC_number="6.1.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase"
                     /protein_id="HAY9052540.1"
                     /translation="MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGH
                     AKSICLNFGIAQDYKGQCNLRFDDTNPVKEDIEYVESIKNDVEWLGFHWSGNVRYSSD
                     YFDQLHAYAIELINKGLAYVDELTPEQIREYRGTLTQPGKNSPYRDRSVEENLALFEK
                     MRAGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCI
                     SDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNL
                     LVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTRQDNTIEMASLESCIRE
                     DLNENAPRAMAVIDPVKLVIENYQGEGEMVTMPNHPNKPEMGSRQVPFSSEIWIDRAD
                     FREEANKQYKRLVLGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADG
                     RKVKGVIHWVSAAHALPVEIRLYDRLFSVPNPGAADDFLSVINPESLVIKQGFAEPSL
                     KDAVAGKAFQFEREGYFCLDSRHSTAEKPVFNRTVGLRDTWAKVGE"
     gene            complement(23662..25608)
                     /gene="nagE"
                     /locus_tag="JN001_001244"
     CDS             complement(23662..25608)
                     /gene="nagE"
                     /locus_tag="JN001_001244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetyl glucosamine transporter subunit
                     IIABC"
                     /protein_id="HAY9052541.1"
                     /translation="MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNVAFIAQA
                     GGAIFDNLALIFAIGVASSWSKDSAGAAALAGAVGYFVLTKAMVTINPEINMGVLAGI
                     ITGLVGGAAYNRWSDIKLPDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQHAIH
                     AGGEWIVSAGALGSGIFGFINRLLIPTGLHQVLNTIAWFQIGEFTNAAGTVFHGDINR
                     FYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVAVTAFLTGV
                     TEPLEFLFMFLAPLLYLLHALLTGISLFVATLLGIHAGFSFSAGAIDYALMYNLPAAS
                     QNVWMLLVMGVVFFAIYFVVFSLVIRMFNLKTPGREDKEDEIVTEEANSNTEEGLNQL
                     ATNYIAAVGGTDNLKAIDACITRLRLTVADSARVNDTMCKRLGASGVVKLNKQTIQVI
                     VGAKAESIGDAMKKVVARGPVAAASAEATPSTAAPVAKPQAVPNAVSIAELVSPITGD
                     VVALDQVPDEAFASKAVGDGVAVKPTDKIVVSPAAGTIVKIFNTNHAFCLETEKGAEI
                     VVHMGIDTVALEGKGFKRLVEEGAQVSAGQPILEMDLDYLNANARSMISPVVCSNIDD
                     FSGLIIKAQGHVVAGQTPLYEIKK"
     gene            25941..26741
                     /gene="nagB"
                     /locus_tag="JN001_001245"
     CDS             25941..26741
                     /gene="nagB"
                     /locus_tag="JN001_001245"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008805656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HAY9052542.1"
                     /translation="MRLIPLTTAEQVGKWAARHIVNRINAFKPTADRPFVLGLPTGGT
                     PMTTYKALVEMHKAGQVSFKHVVTFNMDEYVGLPKEHPESYYSFMHRNFFDHVDIPAE
                     NINLLNGNAPDIDAECRQYEEKIRSYGKIHLFMGGVGNDGHIAFNEPASSLASRTRIK
                     TLTHDTRVANSRFFDNDVNQVPKYALTVGVGTLLDAEEVMILVLGSQKALALQAAVEG
                     CVNHMWTISCLQLHPKAIMVCDEPSTMELKVKTLRYFNELEAENIKGL"
     gene            26801..27949
                     /gene="nagA"
                     /locus_tag="JN001_001246"
     CDS             26801..27949
                     /gene="nagA"
                     /locus_tag="JN001_001246"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HAY9052543.1"
                     /translation="MYALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEIEQR
                     SLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLITT
                     SDELMKQGVRVMREYLARHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLC
                     ENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLY
                     NAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATA
                     PAGANIEQFIFAGKTIYYRNGLCVDENGTLSGSSLTMIEGVRNLVEHCGIALDEVLRM
                     ATLYPARAIGVEKRLGTLAAGKVANLTAFTPDFKITKTIVNGNEVVTQ"
     gene            27958..29178
                     /gene="nagC"
                     /locus_tag="JN001_001247"
                     /gene_synonym="nagR"
     CDS             27958..29178
                     /gene="nagC"
                     /locus_tag="JN001_001247"
                     /gene_synonym="nagR"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator NagC"
                     /protein_id="HAY9052544.1"
                     /translation="MTPGGQAQIGNVDLVKQLNSAAVYRLIDQYGPISRIQIAEQSQL
                     APASVTKITRQLIERGLIKEVDQQASTGGRRAISIVTETRNFHAIGVRLGRHDATITL
                     FDLSSKVLAEEHYPLPERTQQTLEHALLNAIAQFIDSYQRKLRELIAISVILPGLVDP
                     DSGKIHYMPHIQVENWGLVEALEERFKVTCFVGHDIRSLALAEHYFGASQDCEDSILV
                     RVHRGTGAGIISNGRIFIGRNGNVGEIGHIQVEPLGERCHCGNFGCLETIAANAAIEQ
                     RVLNLLKQGYQSRVPLDDCTIKTICKAANKGDSLASEVIEYVGRHLGKTIAIAINLFN
                     PQKIVIAGEITEADKVLLPAIESCINTQALKAFRTNLPVVRSELDHRSAIGAFALVKR
                     AMLNGILLQHLLEN"
     gene            29226..29978
                     /gene="nagD"
                     /locus_tag="JN001_001248"
     CDS             29226..29978
                     /gene="nagD"
                     /locus_tag="JN001_001248"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide monophosphatase NagD"
                     /protein_id="HAY9052545.1"
                     /translation="MTIKNVICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNY
                     PSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQEGKKAYVVGEGALIHELYKA
                     GFTITDVNPDFVIVGETSSYNWDMMHKAAYFVANGARFIATNPDTHGRGFYPACGALC
                     AGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETI
                     LVLSGVSSLDDIDSMPFRPSWIYPSVAEIDVI"
     gene            30375..32039
                     /gene="asnB"
                     /locus_tag="JN001_001249"
     CDS             30375..32039
                     /gene="asnB"
                     /locus_tag="JN001_001249"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001724523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase B"
                     /protein_id="HAY9052546.1"
                     /translation="MCSIFGVFDIKTDAVELRKKALELSRLMRHRGPDWSGIYASDNA
                     ILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTGSDCEV
                     ILALYQEKGPEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVAS
                     EMKSLVPVCRTIKEFPAGSYLWSQDGEIRSYYHRDWFDFDAVKDNVTDKNELRQALED
                     SVKSHLMSDVPYGVLLSGGLDSSIISAITKKYAARRVEDQERSEAWWPQLHSFAVGLP
                     GSPDLKAAQEVANHLGTVHHEIHFTVQEGLDAIRDVIYHIETYDVTTIRASTPMYLMS
                     RKIKAMGIKMVLSGEGSDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKA
                     MSAWGVEARVPFLDKKFLDVAMRINPQDKMCGNGKMEKHILRECFESYLPASVAWRQK
                     EQFSDGVGYSWIDTLKEVAAQQVSNQQLETARFRFPYNTPTSKEAYLYREIFEELFPL
                     PSAAECVPGGPSVACSSAKAIEWDEAFKKMDDPSGRAVGVHQSAYK"
     gene            32420..32496
                     /locus_tag="JN001_001250"
     tRNA            32420..32496
                     /locus_tag="JN001_001250"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32454..32456,aa:Met,seq:cat)
     gene            32505..32589
                     /locus_tag="JN001_001251"
     tRNA            32505..32589
                     /locus_tag="JN001_001251"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32539..32541,aa:Leu,seq:tag)
     gene            32613..32687
                     /locus_tag="JN001_001252"
     tRNA            32613..32687
                     /locus_tag="JN001_001252"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32645..32647,aa:Gln,seq:ttg)
     gene            32722..32796
                     /locus_tag="JN001_001253"
     tRNA            32722..32796
                     /locus_tag="JN001_001253"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:32754..32756,aa:Gln,seq:ttg)
BASE COUNT         7826 a         8283 c         8497 g         8191 t
ORIGIN      
        1 gaacaggcca cgccggtggg ggcaccaatg cgcaccccgg ctgaaccctg aacaatgcta
       61 ccgccatact gcgtcatgtc gccctgacgc gctgccggtt ttccgctcat ttctcatcct
      121 tgttttatcg ggttatttgt ccgctgacag gcaaaaccct acagatttat aagaaagcct
      181 taagtgagat atccatcaga tagaaacaat taggaaaata tttatatatt tttcctgaat
      241 atatttcagc tgggtaatac catatctaaa tatttacctg aacatcttcc taataaaaaa
      301 accgccagca tctccactag cggttttcaa tgtattcaaa actcggcaat cagtaaaaat
      361 caccggttgc cttttcggcc tgttccatcc aaaccggttt atcgctggtt ttcgaccaga
      421 cgcggtgcag gtagctgtaa aagcgggcgc ggtctttcca gaaaagcatg aaaggcagcg
      481 ccagaacgcc cgctgcaacc gcatatgtac ggcgtaaaaa gataagccat gcaggatatt
      541 ctctgtagag ttccatactt ttctccccct tttgtatcta cccggtgaat agcaccggaa
      601 aaatgaattt gtttatctga tgaaaatagt accgcctttt gtgtaatttt actactcatc
      661 cgaccactta tttttgctta ttgatggttt atttacattc actctgtaat taagttgcac
      721 aaaagttaaa ttaatgctaa acattagtta aaccatggct tttgccattt ttatactttt
      781 tttacacccc gcccgcagat ttttgcgaaa tctttgcagc cagaattcta ctcttccggt
      841 atcactttta ggccactgga ggtgcactgt gagtgcaggc gtgatagccg gcgtgttgct
      901 ggtgttttta ttactgggtt atttggttta tgccctgatc aatgcggagg cgttctgatg
      961 gctgcgcaag ggttcttact gattgccacg tttttactgg tattaatggt gctggcgcgt
     1021 cctttaggca gcgggctggc gcggctgatt aatgacattc ctcttccagg tacagcgggc
     1081 gttgaacgta tactctttcg tttacctggc gtctctgacc atgagatgaa ctggaagcaa
     1141 tatctttgtg ccattctcgg cctgaacatg ctggggctgg cggtgctgtt ttttatgttg
     1201 ctcggtcagc actatctgcc gcttaatcca cagcagttgc cggggctgtc gtgggatctg
     1261 gcgctgaata ccgccgtcag ctttgtcacg aataccaact ggcaatctta tagcggtgaa
     1321 accacgttga gctatttcag ccagatggca ggcttaacgg tacaaaactt tctttctgcc
     1381 gccagcggga ttgcggtgat ttttgccttc atccgtgcgt ttactcgcca gagcatgagc
     1441 acactcggga atgcctgggt cgatctgcta cgcatcacgt tatgggtgct agtccctgtg
     1501 gcgttgttga tcgcactgtt ttttattcaa caaggtgcgc tgcaaaactt tctgccctat
     1561 caggcagtga ataccgttga aggagcgcaa cagctgttac ccatgggacc agtagcttct
     1621 caggaagcga tcaagatgct cggtactaac ggcggtggct tctttaatgc caactcgtcg
     1681 catccgtttg aaaacccaac cgcactgacc aacttcgtgc agatgctggc gatcttcttg
     1741 atcccaacag ctctgtgctt tgcctttggt gaagtgacgg gcgatcgccg ccaggggcgc
     1801 atgttgctgt gggcgatgtc agtgattttt gtcatctgcg taggcgtggt tatgtgggca
     1861 gaagttcagg gtaatcctca tctgctggcg ctcggcgcag acagcagcat caatatggaa
     1921 ggtaaagaga gccgtttcgg cgtgctggtc agtagcctgt ttgcggtcgt gactacggcg
     1981 gcgtcctgtg gcgcggtgat tgcgatgcat gattcgttta ccgctctcgg cggcatggtg
     2041 ccgatgtggc taatgcaaat tggtgaagtg gtgttcggcg gtgtcggttc tggtctttac
     2101 ggcatgatgc tgtttgtcct gctggcggtg tttattgccg ggctgatgat tggtcgtaca
     2161 ccggaatatc tgggtaaaaa aatcgacgta cgcgagatga aactgactgc actggcgatt
     2221 ctggttactc caacactggt actgatgggc gcggcgttgg cgatgatgac cgacgccgga
     2281 cgtagcgcca tgcttaaccc tggcccgcat ggttttagcg aagtgctgta cgccgtgtcg
     2341 tccgccgcta acaacaacgg cagcgccttt gccggattaa gcgccaactc tccgttctgg
     2401 aactgtttac tggcgttctg catgtttgtc ggtcgcttcg gggtgattat cccggtgatg
     2461 gcaattgccg gttcgctggt gagtaaaaag agccaacccg ccagctccgg cacgctgcca
     2521 acgcacggcc cgctgtttgt tggcctgtta atcggcaccg tgttgctggt tggcgcactg
     2581 acctttatcc ctgccctggc gcttggtccg gtggcggaat atctctcctg atgatattga
     2641 gtgagcactg aatatgagtc gtaaacaact ggcgctattc gaaccaacac ttgtcgttca
     2701 ggcgctgaaa gaagcggtga aaaaattaaa cccgcaggcg caatggcgca atccggtgat
     2761 gtttatcgtc tggatcggca gtctgctgac cacctgtatt agcatcgcga tggcaagcgg
     2821 tgcgatgcct ggcaatgcgc tgtttagcgc ggcaattagc ggctggctgt gggtcaccgt
     2881 actgttcgct aatttcgccg aggcgctggc agaaggccgc agtaaagcgc aggccaacag
     2941 tcttaaaggg gtgaaaaaaa ctgcctttgc ccgcaagctg cgtgagccga aatatggcgc
     3001 tgcggcggac aaagttcctg ccgatcaact gcgtaaaggt gacatcgtgc tggtagaagc
     3061 tggcgatatt atcccctgcg atggtgaagt cattgaaggc ggcgcatcgg tcgatgaaag
     3121 cgccatcacc ggggaatcgg caccggtgat ccgtgaatcc ggcggcgatt ttgcctccgt
     3181 caccggcggc acgcgtattc tttctgactg gctggtgatt gagtgtagcg ttaaccccgg
     3241 tgagacattt ctggatcgga tgatcgcgat ggtggaaggc gcacagcgac gcaaaacacc
     3301 gaacgagatt gccctgacta tcctgctgat tgctctgacc atcgtctttt tactggcaac
     3361 cgccacgctg tggccgtttt ccgcgtgggg cggtaatgcc gtgagtgtaa cggtactggt
     3421 ggcgctgctg gtctgtctga tcccaaccac tattggcggc ctgttgtcag cgatcggcgt
     3481 cgccgggatg agtcggatgc tgggcgcgaa tgtgattgcc accagcggac gtgcagttga
     3541 agcggcaggt gacgttgacg ttctgctact ggataaaacc ggcaccatca cactcggtaa
     3601 ccgtcaggcg tcggagttta tccctgcgca gggcgtggat gaaaaaacgc tggctgacgc
     3661 cgcacaactg gcttcgctgg ctgatgaaac gccggaaggc cgcagtattg tgatcctcgc
     3721 caagcaacgt tttaacctgc gcgagcgcga tgtgcagtcg ctccatgcca cctttgtacc
     3781 gtttactgcg caaagccgga tgagcgggat caacatcgac aaccgcatga tccgtaaagg
     3841 ttctgtcgat gccattcgcc gccatgttga ggctaacggc ggtcacttcc ctgccgatgt
     3901 tgatcaaaaa gtcgatcagg ttgcgcgtca gggggccacg ccgctggtgg tggtggaagg
     3961 ttcccgtgtg ctgggcgtta ttgcgctgaa agatatcgtc aaaggcggta ttaaagagcg
     4021 cttcgcccag ctgcgcaaaa tgggcattaa aacggtgatg attaccggcg ataaccgtct
     4081 gactgccgcc gccattgctg cggaagcggg cgtcgatgat tttctcgccg aagcgacacc
     4141 ggaggccaag ctggcattga ttcgtcagta tcaggcggaa ggccgtttgg tggcgatgac
     4201 cggcgacggc accaacgatg ctccggcgct ggcgcaagca gatatcgcgg tggcgatgaa
     4261 ctccggcacc caggcggcga aagaggcggg caatatggtc gatctcgact ctaacccgac
     4321 caagttgatc gaggtggtgc atattggcaa acagatgctg atgacccgtg gctcgctgac
     4381 caccttcagc attaccaacg atgtggcgaa atacttcgcc attattccgg cggcgttcgc
     4441 ggcaacgtat ccgcagttaa atgcgctgaa catcatgcgc ctgcattcgc ccgactccgc
     4501 cattctcagt gcagtcattt tcaacgcctt gattatcgtc tttttgattc ctctggcgtt
     4561 aaaaggcgtg agttataaac cgcttaccgc ttctgccatg ttgcgccgta acttatggat
     4621 ttacggtctg ggtgggctgc tggtgccgtt tattggtatc aaagtcattg atttactgct
     4681 gaccgtttgc ggtctggtgt gaggtttacc atgcgtggct tacgtccggc attatcgaca
     4741 tttatctttc tgttattgat tactggcggc gtttacccgc tgctgaccac cgtgctgggg
     4801 caatggtggt ttccctggca ggccaacggt tcgttgattc gtgaaggtga tacggtgcgg
     4861 ggttcggcat taatcgggca gaattttacc ggcaacggca gaaatgccct ataatccaca
     4921 ggcttctggc gggagcaatc tggcggtcag taaccctgag ctggataaac aaatagccgc
     4981 acgcgttgct gcattacggg ccgctaaccc ggatgccagt acgaacgttc cggttgaact
     5041 ggtgacggca tcggcaagcg ggctggacaa taatatcacc ccgcaagcgg cggcctggca
     5101 gatcccacgc atcgcgaaag cgcgtaatct cagcgttgaa cagctcacgc agctgatcgc
     5161 aaaatacagc caacaaccgc tggtgaaata tatcggccag ccggtcgtca acattgtcga
     5221 actcaatctg gcgctggata agcttgatga ataacgaacc cttacgtccc gaccccgatc
     5281 gtctgctgga acaaactgcc gcgccgcatc gggggaagct gaaagttttc ttcggtgcct
     5341 gtgcaggcgt cgggaagacc tgggcgatgc tggcagaagc ccagcgactg cgggcgcaag
     5401 ggctggatat tgtggttggc gtggtagaaa cccacgggcg aaaagatacc gacgcaatgc
     5461 tggaagggct ggctgttctg ccgccaaaac gcctggcgta ccgtgggcgg cacatctgcg
     5521 agtttgacct cgatgccgcc ctcgcccgcc gtccggcgct gatcttaatg gacgaactgg
     5581 cgcacagtaa tgcgctaggt tctcgtcacc ctaaacgctg gcaggacatc gaagagctgc
     5641 tggaagcagg cattgatgtt ttcactaccg tcaacgttca gcatctggaa agtctgaatg
     5701 atgtggtcag cggcgtcacc ggaattcagg tacgggaaac cgtgcccgat ccttttttcg
     5761 atgccgccga cgacgtggtt ctggtggact tgcccccgga cgatctgcgc cagcggctga
     5821 aagaaggcaa agtctatatt gccgggcagg cggagcgcgc cattgaacat tttttccgca
     5881 aaggcaatct gatcgccctg cgcgaactgg cactgcgccg tactgccgat cgcgttgatg
     5941 agcaaatgcg cgcctggcgg gggcatcctg gcgaagagaa agtctggcac acgcgcgacg
     6001 cgatcctttt atgcatcggc cataacaccg gtagtgagaa gctggtccgc gcggcggcgc
     6061 ggctggcgtc acggctgggt agcgtctggc acgcggtgta tgttgaaacc cctgccctgc
     6121 accgcttacc ggaaaaaaaa cgtcgggcaa ttctcagcgc cttacgtctg gcgcaggagc
     6181 tgggcgcgga gacggcaaca ctttctgatc cagcggaaga aaaagcagta gtgcgttatg
     6241 cccgtgaaca taatctcggc aagattattc tcggtcgccc ggcctcgcgc cgctggtggc
     6301 gtcgggaaac gtttgctgac cgactggcgc gcatcgcccc cgatctcgat caggtgctgg
     6361 tcgcgcttga tgaaccaccc gcccgcacga ttaacaacgc gccggatagc cgctctttta
     6421 aagacaagtg gcgggtacag attcagggat gcgtggttgc cgccgcgtta tgcgccgtta
     6481 tcactttaat tgccatgcag tggctgatgg cgtttgatgc cgccaacctg gtgatgctgt
     6541 atctgcttgg cgtggtggtg gtggcgctat tttatggacg ctggccttcg gtggttgcta
     6601 ccgtcattaa tgtggtgagt ttcgatctct tttttatcgc cccacgcggc acgctcgccg
     6661 tctctgatgt gcaatatctg ctgaccttcg cagtgatgtt aaccgtcggg ctggtgatcg
     6721 ggaaccttac tgctggcgtg cgttatcagg cgcgggtagc ccgttaccgc gagcaacgca
     6781 cacggcactt atatgaaatg tcgaaagctc tggcggtggg ccgcagtccg caggacatcg
     6841 ccgccaccat cgaacaattt attgcctcca cgtttcatgc ccgcagtcag gtgttgttgc
     6901 ccgatgacaa cggtaaattg cagccgttaa cacatccgca aggaatgacg ccatgggacg
     6961 ataccatcgc gcagtggagt tttgataaag gcctgcctgc gggcgcgggc accgacacgt
     7021 tacccggtgt accgtaccag attttgccgc taaaaagcgg cgagaaaacc tacgggctgg
     7081 tggtggtgga gccggggaat ctgcgccagt tgatgatccc ggaacagcag cgcctgctgg
     7141 agacgtttac gctgttagtc gccaatgccc ttgagcggct gacgctaacc gccagcgaag
     7201 aacaggcgcg gatggcaagc gaacgtgaac agatccgcaa cgccctactg gcagcgcttt
     7261 cgcatgattt acgcacgccg ctcacggtgc tgttcggtca ggcagaaatc ttaacgctcg
     7321 atctggcaag cgaaggatcg ccccacgccc gccaggccag cgagattcgt cagcatgtgc
     7381 tgaacactac ccgactggtg aataatctac tggatatggc gcgaattcag tccggcggct
     7441 ttaatttgaa gaaagagtgg ttaacgctgg aagaagtggt cggtagcgcg ctgcaaatgc
     7501 tggaaccggg tttatcgtcg cccatcaatc tttctctgcc agaaccgctg accttaatcc
     7561 acgttgacgg gccactcttt gaacgggtgc tgattaatct gctggagaac gcggtgaaat
     7621 atgcgggtgc gcaggccgaa attggtatcg atgcccacgt tgagggcgaa aatctacaac
     7681 tggatgtctg ggataacggc cccggtcttc cgccaggcca ggagcagacg atatttgata
     7741 agtttgctcg cgggaataaa gagtcggcag taccgggggt agggcttgga ctggcaattt
     7801 gtcgggcgat agtggatgta cacgggggca ctattaccgc gttcaaccga ccggaaggtg
     7861 gtgcctgttt tcgtgttaca cttccccagc aaactgcccc tgaacttgaa gaatttcatg
     7921 aggatatgtg acaaacgttc tgattgttga agatgaacag gctattcgtc gctttctgcg
     7981 cacggcgctg gagggcgacg ggatgcgcgt ctatgaggcc gaaacgctgc aacgcggctt
     8041 gctggaagcg gctacccgta agccagattt gattattctc gatctcggcc tgcccgatgg
     8101 tgatgggatt gagtttatcc gcgacctgcg ccagtggagc gcggtgccgg tgattgtgct
     8161 ttccgcacgc agcgaagaga gcgacaaaat cgccgcgctg gatgccggag cggatgatta
     8221 tctgagtaag ccgtttggca ttggcgaatt gcaggcccgt ctgcgcgtcg ctttacgccg
     8281 ccactccgct accgccgcgc ccgatccgct ggtgaaattt tccgatgtta ccgtcgattt
     8341 agccgcccgc gtgattcacc ggggtgagga agaggtgcat ctcacaccaa ttgagttcca
     8401 cctgctggcg gtgctgctca acaatgccgg aaaagtactc acccagcgcc agctccttaa
     8461 ccaggtgtgg gggccaaacg cggtcgaaca cagtcactat ttgcgtattt atatgggaca
     8521 tctgcgacaa aaactggaac aggatcccgc ccgcccacgc catttcatta ctgaaaccgg
     8581 tattggctat cggtttatgc tttgaatatt aattttaata cagcctgcct tttattaatt
     8641 aaagccgtaa taataaatac ggctttttat cttaaacaac acacaaaaat aacaattcaa
     8701 tattttatat tactgagtaa aaagctcatc attaaataaa ttaagattga tcatttttta
     8761 ttgatcacct tcacagttca accgtatttc ctggatagaa tatcttcacc ttcattcaca
     8821 tcaggaaagg taaattaaat ggaaaataac agccgcacta tgccccatat aaggcggaca
     8881 actcatatta tgaagtttgc tcatcgcaat agcttcgact ttcacttctt caatgcccgt
     8941 tagtctaccg actaagggca cttcagcgta caggtcttcc tgactctctg tattacaggc
     9001 atatgcctgt attccgcagt gctcattctc tgttaaccct tgtattatca gccaccggac
     9061 tggtaagggt ttctgcattc tgaaaaaagc aatctacctg atttatttat cagcggggta
     9121 actttgcttt tttccggcac gatcgatttc tcattcgaga aattgaggac ctgctattac
     9181 ctaaaataaa gagatgaaaa atgtcaaaat taaaaattgc ggttagtgat tcttgcccgg
     9241 actgttttac cacgcagcga gaatgtatct acattaatga aagtcgtaat atcgatgtgg
     9301 cggcaatcgt tttatcgctc aacgatgtta catgcggaaa actcgatgaa atcgatgcca
     9361 cgggttatgg catcccggta tttattgcta ctgaaaatca agaacgtgta cccgcagagt
     9421 atttgccctg tatttcgggt gtctttgaga attgcgaatc gcgacgagaa ttttatggtc
     9481 gtcagttaga aaccgctgcc agccattatg aaactcaact gcgcccacct ttcttccgcg
     9541 cactggtcga ttatgtcaat caaggtaaca gcgcgtttga ttgccctggt catcagggcg
     9601 gcgaattttt ccgtcgccat ccggcgggga atcagtttgt ggaatacttt ggtgaggcgc
     9661 tgttccgttc cgacttgtgc aacgcagacg tagcaatggg tgatctgctg attcacgaag
     9721 gcgcgccatg cattgcacag caacatgcgg caaaagtgtt caatgccgat aaaacatact
     9781 tcgttctaaa tggcacttca tcttctaaca aagtggtttt aaacgccctg ctgacaccgg
     9841 gtgatctggt gctgtttgac cgcaataacc acaaatctaa ccaccacgga gcgttgctac
     9901 aggctggtgc aacaccggtt tatctggaaa ccgcacgtaa cccgtatggc tttatcggtg
     9961 gcattgatgc gcactgtttt gaagaaagtt acctgcgtga gctgatcgcg gaagtcgcac
    10021 cgcagcggac aaaagaggct cgtcctttcc gcctcgccgt tattcagcta ggcacctacg
    10081 acggtacgat ttataacgcc cgccaggtgg tggataaaat tagtcatctg tgtgactaca
    10141 ttctgtttga ctccgcatgg gtcggctatg agcaatttat cccgatgatg gctgactgtt
    10201 caccgctgtt gctggatctt aatgagaacg atccgggcat tctggttacg caatctgtgc
    10261 ataaacagca ggctggtttt tctcaaactt cacaaatcca taaaaaagac agccacatca
    10321 aagggcaaca gcgttatgta ccgcacaaac gcatgaacaa cgcctttatg atgcatgcct
    10381 ccaccagccc gttctatccg ctgtttgccg cactggatat caacgccaaa atgcatgaag
    10441 gtgtcagcgg tcgtaatatg tggatggatt gtgtggtaaa tggcattaat gcccgcaagc
    10501 tgatcctcga taactgtcag catattcgtc cgttcgtacc tgaactagtg gatggtaaac
    10561 cctggcagtc gtatgaaaca gcgcaaattg cggttgatct gcgcttcttc cagtttgtac
    10621 caggggaaca ctggcactct tttgaaggct atgcagagaa tcaatacttt gtcgatccat
    10681 gcaaactgtt gctgacaacc ccaggttttg atgcacgtaa cggcgaatat gaagcgttcg
    10741 gtgtacccgc gacgattctt gctaacttcc tgcgcgaaaa tggcgtagtg ccggaaaaat
    10801 gcgatcttaa ctccatcctc ttcctgctga ctccggcaga agatatggcc aaacttcagc
    10861 aacttgttgc cctgctggta cgcttcgaaa aactgcttga gtccgacgcg ccattagcag
    10921 aagtgctgcc ttccatctac aaacagcatg aagagcgcta cgccggttat acccttcgtc
    10981 agttatgcca ggaaatgcat gatttgtatg cccgtcacaa cgtgaaacaa ccgcaaaaag
    11041 agatgttccg taaggaacac ttcccacgcg taagcatgaa tccacaagaa gccaactacg
    11101 cctattcacg cggtgaagtg gagctggttc gtctgccgga tgccgaaggc cgtatcgctg
    11161 ccgaaggtgc gcttccttat cctccgggtg tgctgtgtgt tgttccgggt gaaatctggg
    11221 gtggtgctgt tttgcgttac ttcagcgctc tggaagaagg gatcaacctg ctgccaggtt
    11281 ttgcaccgga gctgcagggt gtctatatcg aagaacatga tggtcgtaag caagtttggt
    11341 gctatgtcat caagcctcgt gatgcgcaaa gcaccctgtt gaaaggggaa aaattatgag
    11401 tcaggctaaa tcgaacaaaa tgggcgtcgt tcagttaacc atactgacga tggtcaacat
    11461 gatgggctcc ggtatcatca tgctgccgac aaagcttgcc gaagttggga caatctcaat
    11521 tatctcctgg ctggtgacag ccgtaggctc aatggcactg gcatgggcat tcgcaaaatg
    11581 cggtatgttc agccgtaaat caggcggtat gggcggttat gcggagtatg ctttcggtaa
    11641 gtccggcaat tttatggcga actacaccta cggtgtctcg ctgctgattg ctaacgtcgc
    11701 gattgctatt tcggcggttg gttacggcac cgaactgctc ggcgcgagtt tgtcgccagt
    11761 gcagattggt cttgcgacca tcggagtgct gtggatttgt accgtggcta actttggtgg
    11821 tgcgcgcatt accgggcaaa tcagtagcat tactgtgtgg ggagtcatta ttccggtcgt
    11881 cggtctgtgc attattggct ggttctggtt tagtccgacg ctgtacgcta actcatggaa
    11941 cccgcaccat gtgccgttct ttagcgctgt aggttcttcc atcgccatga cgttgtgggc
    12001 tttcctcggt ctggagtcag cctgtgccaa cgccgaagta gtggaaaacc cggaacgtaa
    12061 cgtgccgatt gcagttcttg gcggtacttt aggtgcggcg gtgatttata tcgtctccac
    12121 caacgtgatt gccgggattg tgcctaatat ggagctggca aattcaacgg caccatttgg
    12181 cctggctttc gcacagatgt tcacaccaga agtgggtaaa gtcattatgg cgctgatggt
    12241 gatgtcctgc tgcggttcac tgcttggctg gcggttcact gcttggctgg cagttcacca
    12301 ttgcccaggt gtttaaatct tcatctgatg aaggctactt ccctaaaatt ttctcccgtg
    12361 taaccaaagt ggatgcaccg gtgcagggaa tgttgaccat tgtgattatt cagagtggat
    12421 tggcactgat gaccattagc ccgtcactga acagccagtt caacgtgctg gttaacctgg
    12481 ccgtggtgac caatatcatt ccgtatattc tgtcaatggc ggcattagtc attattcaga
    12541 aggtcgctaa tgtgcccccc tcaaaagcga aagtagcaaa ctttgttgcc tttgttggtg
    12601 cgatgtacag tttctatgcg ctgtactcat ccggggaaga agccatgctg tacggttcta
    12661 tcgtgacctt ccttggttgg acactgtatg gtctggtatc accatgcttt gaactgaaaa
    12721 ataaacacgg ttaataaaac aaagtaaaaa agggcgattg aatgatcgcc ctttctgttt
    12781 gttggcaaat agttcgttat ttatgccgca tccggcagat gtagggtcta aacgcgatcg
    12841 aacacagcaa ctatttgcgt aattatatgg ggcatctgcg acaaaaactg gaacaggatc
    12901 cggcccggcc tcgccatttt attactgaaa ccggtattgg gtatcggttt atgctttgaa
    12961 aaaagtggca atgtatggat aaagtcattt tttattcaaa tataaggaac ttaatattta
    13021 aaaaatgttc catacaattc ctcatcataa atgacaccgt agcacacaag gagcaagtag
    13081 cgatgcgtga aatgaatcag ttagtaaata ctgaagattc agcctggcca ataatccaga
    13141 actggttaaa agacgccaca aaccataccg aactcttacc ggttaataaa aatttagccg
    13201 aaaccgcact ttatcaatta caggtgacaa caaaatcacc gatgggtgcg cttgtctatg
    13261 gctccggagg tctgctgatt gataatggtt ggttacgcat agcaggatct ggtcaccccc
    13321 ggttgccacg agatccagta agttggacac aacgccctga attcgcaggc gtgcgggctt
    13381 tacccatcgc tgacgatgtc gcagggggaa tttttgctct taatggtggc gatcttgggg
    13441 aagatactgg ctgcgtttat tattttgcgc cagatacgct gaattgggaa agtctggaag
    13501 ttggatattc tgagtttctt cagtgggcat tatccggtga tttagatacc ttctatgaaa
    13561 atgtacgatg gcagcaatgg cgagaagacg taataaaatt atcggcaacg gaagccttca
    13621 cgttctaccc tttcttatgg gtacaaagtg aagaagcaag aacaagaaaa gttatttcgc
    13681 ttactgaact ctgggaaatg cagtatcaaa tgaaagaaac attcacgcaa taagacatgt
    13741 tcaggtccgg gtttcattcc cggactcact attttaatgt gtatttatcg ctttcaattc
    13801 ttgctggcaa ttttctgact ggcagcgtcg taactcaata atcccgacat gcatcatcga
    13861 gccaaaaaat ccgctttcgc tgacataatc ctcattgact atcggtcgag tgccgggctt
    13921 gccctggcaa acccgcataa aaaatgaggt gtagcattgc caaccgggat ttaaaccgac
    13981 cttttcttgt gctgacatat tatgaagata agtaagttct ttttcgttcc cgcctgacaa
    14041 ctgccagcgg cgggtattat caggtaagtt atcaccacgg caatttgtct tacaccggga
    14101 aggtgcaata tttaccgcaa tgctacccgt taatcttctg gttttatctt taggggtcag
    14161 taaccagtcg ccagctaatg atgattgttc aggttgggcg catgcagtca gcagtaatgt
    14221 ggcggtaatt agtgacacta tgacgaccag actcctgttg gtcttcattg ggatttcctt
    14281 gagctactca gtttgttgac aaagtgttcg ttgtttttgc cggatgcggc gtgaacgcct
    14341 tatccggcct acaaaatctc gtaaattcaa tatattgcac catcctcgta ggcctgataa
    14401 gcgtagcgca tcaggcaatt ctgtgtttgt catacgtaaa aaagggcgat cttccgaccg
    14461 ccctttttct tatttaatgt gtttacgcgt ttttcagaac ttcgctaaca atctcaaccg
    14521 cttctttctc aatctgcttg cgatgttctt caccgaggaa gctttcgcag tagatcttat
    14581 atgcgtcttc cgtgcctgac ggacgcgcgg cgaaccagcc gttgtcagtc atcactttca
    14641 gaccgccgat agaagcacca ttgcccggtg ccgccgtcag gcgcgcggtg atcgggtcgc
    14701 ctgccagggt gctggcgctc accatttccg gagacagctt agacagcgcc gctttttgtg
    14761 cggaagtcgc agctgcctgc aaacggttgt agctcggcgc accaaagcgt tttgccagtt
    14821 cgttgtagtg ttcctgcggg ttcttaccgg tgacagcggt gatttccgcc gccagcagac
    14881 acatgatgat gccgtctttg tcggtggacc acggcgtgcc gtcgaaacgc aggaaggaag
    14941 cccctgcgct ctcttcgccg ccaaagccga agctgccgtc gaacagacca tcaacaaacc
    15001 atttgaaacc taccgggact tctaccagct tgcggcccaa gtcattgacc acacggtcga
    15061 tcatcgcaga agaaaccagc gttttaccga cagcaacatc tttgccccac tgcggacgat
    15121 gctggaacag gtagttgatc gccaccgcca ggtagtggtt cggattcatc aaacctgccg
    15181 gagtgacgat accgtgacgg tcataatccg ggtcgttagc aaacgccaga tcgaacttat
    15241 cacgcagtgc cagcaggccc gccatcgcac actcggagga gcagtccata cggatcgcgc
    15301 cgtctttatc aaggtgcata aagcggaagg tttgatcgac ctgatcgtta acgatggtca
    15361 ggttgaggtt gtaatactcg ccaatacgct tccagtattc gataccggaa ccgcccagcg
    15421 gatcaacgcc cagcgtcagg cccgctttct gaatcgccgc catatcaacg atatcggcca
    15481 gaccttccac aaacggctgc accagatcct gctctttcac atgaccggat gccatcgctt
    15541 cgtcgaggga gatacgcttc acgcctttca ggccatcggc cagcagtgcg ttggccctgt
    15601 cttccaccac tttggtgacg ttggtatcag ccgggccacc atttggcgga ttgtacttga
    15661 taccaccatc ttccggcggg ttatgggacg gtgtaatcac gataccgtct gccagcggac
    15721 cacctttttt attgtgaacc aggatggcat tggaaacggc aggcgttgga gtgaagccat
    15781 tgttttcctg cacaatgaca tcaacgccgt tcgctgccag cacttccagt acggaaatga
    15841 acgcaggctc ggacagggcg tgagtatctt tacccacata gcaagggcca gtgatgccgt
    15901 ttttcgcacg ttcttcagca attgcctgag cgatcgccag aatgtgcggc tcgttaaagc
    15961 tgtggcgcgc tgcactgcca cggtgaccgg aagtaccgaa tttcaccgcg tgctccgcat
    16021 tccctgcttc tggtttcagt acataatatt gcgccgtcag ttgggcgacg ttaatcaaat
    16081 cactctgttg tgcaggttgg cctgcacgat tgtggattgc cattgctttg tcctttgtct
    16141 gcaacgtttt agatagttcc gcaaaccttc tcaatcaatt ccgccgggaa ttgcatcgac
    16201 tgcatgatgt gttcgatcat gctgcattta cggccggtgt tggtgttggt gatcacccaa
    16261 tacggcgtgc ctggcacatg tttcggcttg gtctgattac catttttcag cagcgtttgt
    16321 tcatctgccg caaagtaaac gcgtgtacga ccgtgcaacg attccgttgc ttcggcaaac
    16381 gcctgggcgt caagagaata tagtgtagac aacagcagca taaagcgatt gaccgctcgc
    16441 ttttgctctg cgtattcgtc agaaagcaga agttcacgca ttgcgcgaac cttgtcttta
    16501 atcgttttga ccggcttcgc ttcggcgata gcaggtgacg caacgcgaac ctctttcgtc
    16561 accggagcag caggctgtga tgcggcggaa aatttcaaca tacgccgtaa aatgtcggat
    16621 gcgctctcgc cgatatgctt agtgtggctg gcaatatagc tgtagagttc atcatcaact
    16681 tcaatcgttt tcatcttaat ccagtgcagt gtcttagctg aatacaagtc gccaagagta
    16741 tatgaataaa tcccggcagc ggatagcgtc aagcctggct tgcagaaaaa ctcggaataa
    16801 accttatttg ttgcagccct gtggcacaat ggtcaacata ataccctaac ccgacaacgc
    16861 gaaaaaaaga actttgccat gaaattgaat atccgcgcgc aaactgcaca aaaccagcac
    16921 aataattctc ccatcgttct tgtccatggt ctgtttggta gcctcgacaa ccttggcgta
    16981 ctggctcgcg atctggtaaa cgatcacaat atcatccagg ttgatatgcg taaccacggt
    17041 ctttcaccga gagatccggt aatgaattac ccggcgatgg cgcaggatct tgttgatact
    17101 ctggatgcac agcagatcga caaagcaaca tttatcggtc actccatggg cggtaaagcg
    17161 gtaatggcac ttacggcact ggcccgcgat cgcatcgata aactggtggc gatcgatatc
    17221 gcaccggtcg actatcacgt acgccgtcat gatgagattt tcgcggctat caacgcggtc
    17281 agtgaatcgg acgcacaaac tcgccagcaa gcagcagcaa taatgcgcca gcatcttaat
    17341 gaagaagggg tgattcagtt tctgttgaaa tcttttgttg acggggagtg gcgctttaac
    17401 gtgccggtat tgtgggatca gtatccgcat attgtgggtt gggagaaaat cccggcatgg
    17461 gatcaccctg ccctgtttat ccctagcggc aattctccgt atgttagcga gcagtaccgt
    17521 gatgatttac tggcacaatt tccacaggca cgggcgcatg tgattgcagg cgcgggtcac
    17581 tgggtccatg ctgaaaaacc ggatgcggta ttacgcgcta tccgtcgcta tctcaatgat
    17641 taacgcaact gattaaaaac ccagcgtccg cgtcgctttc cgcgcgtggg cgttggcgtg
    17701 actcatcgcg ctgatgtatt atggcgcgct atccatccgg gcagaggcct ggctgattgt
    17761 ttcccccgaa gtcaccaaga tcatggccaa agaacaaacg gaccgtacga cattagatct
    17821 gttcgcgcac gagcgtcgac cgggacgacc gaaaactaat ccgctttcgc gcgatgaaca
    17881 gctgcgtatt aataaacgca accagctaaa acgcgacaaa gtacgtggcc ttaagcgtgt
    17941 cgaactgaag ctgaacgcgg aagctgtcga ggcgctgaac gagctggcgg agtcgcgcaa
    18001 tatgagccgt agcgaactga tcgaagagat gttaatgcag caactggcgg cgctgcgtag
    18061 tcagggcatc gtttaaattt ccactttcat gtagcacagt gtgcagtcct gctcgtttgc
    18121 tgattccgaa agactgcctg ttctgctatg attgccttta tccgtgggca attttccacc
    18181 cccatttcaa taagtttcaa gaggttattt cactcatggc tatcactggc atctttttcg
    18241 gcagcgacac cggtaatacc gaaaatatcg caaaaatgat tcaaaaacag cttggtaaag
    18301 acgttgccga tgtccatgac attgcaaaaa gcagcaaaga agatctggaa gcttatgaca
    18361 ttctgctgct gggcatccca acctggtatt atggcgaagc gcagtgtgac tgggatgact
    18421 tcttcccgac tctcgaagag attgatttca acggcaaact ggttgcgctg tttggttgtg
    18481 gtgaccagga agattacgcc gaatatttct gcgacgcatt gggcaccatc cgcgacatca
    18541 ttgaaccgcg cggtgcaacg atcgttggtc actggccaac tgcgggctat catttcgaag
    18601 catcaaaagg tctggctgat gacgaccact ttgtcggtct ggctatcgac gaagaccgtc
    18661 agccggaact gaccgctgaa cgtgtagaaa aatgggttaa acagatttct gaagagttgc
    18721 atctcgacga aattctcaat gcctgatgtg atgcggcgta gactcatgtc tacgccgtat
    18781 taatagataa tgccaatcaa aataattgct acaaatttgt aacttttgct gttgtacctg
    18841 tacaatgtcc cggtgttcaa gtggccttgc cgttgtaaat gtaagctgtg ccacgttttt
    18901 attaacaata tttgccaggg acttgtggtt ttcatttagg cgtggcaatt ctataatgat
    18961 acgcattatc tcaagagcaa attctgtcac ttcttctaat gaagtgaacc gcttagtaac
    19021 aggacagatt ccgcatgact gataacaata ccgccctaaa gaaagctggc ctgaaagtaa
    19081 cgcttcctcg tttaaaaatc ctggaagttc ttcaggagcc ggacaaccat cacgtcagtg
    19141 cggaagattt atacaaacgt ctgatcgata tgggtgaaga aattggtctg gctacggtat
    19201 atcgcgtact gaaccagttt gacgacgctg gtatcgtcac ccgccacaat tttgaaggcg
    19261 gtaaatccgt atttgaactg acacagcaac atcaccacga tcacctgatc tgcctcgact
    19321 gcggcaaggt tatcgaattt agtgatgatt ccatcgaagc gcgtcagcgt gaaattgccg
    19381 caaaacatgg cattcgcctg actaaccaca gtctctatct ttacggtcac tgtgccgaag
    19441 gcgattgccg cgaagatgaa catgcgcacg aaggcaaata agccagcctg aatgagaaaa
    19501 agccaacctg cgggttggct tttttatgca agggaaataa gaaaagcgag agttacagct
    19561 ctcacttatt tgttattact gcgaatttcc tgccaaactt tatcacaatc ggctttcacc
    19621 gcctgatcat ttccggtttg cgttgcacgc agacactgct gataatccag tacgcggaca
    19681 ctttcctggt cggcaaaatg ctgatgttgt ttctctttct tcagcacgtt taacacgctc
    19741 tggcaggctt caattttttc tggcgaacct tgtgcggtgt tgatacaggc gctgtatgcc
    19801 tctttcagac gactgtcttc ctgtggcgcg gttgattgcg cacaagctac cagccccgat
    19861 gccattatgg cgatgagaat cagttttttc atagcaaatt cctcaaacgt gcggcaggca
    19921 caaaacctgc cgcgtcgggc atcagaagat ggtgaatggt gcgattacca taaatttcac
    19981 gtcacgctca tcctggaaga tgttgccgta accaccgccc cagcttggga tgtcggagtg
    20041 gttgtcgtat tcggtgaagt gcagtttgaa catcgtgcct ttggcgcgac cgtcctgaat
    20101 ggtgtagacc gcatccaggc tgtatgcaga ctcttcaata gtccggtttt tgtcgtagta
    20161 cgcatccgga ttgctctgcc aggtcgcagg tttagcatcc catgcgtaaa cgtaggaagc
    20221 gccgatggcg aagcctagaa gattccagtt tttcaggtca tacatcgcac cgaagaagac
    20281 cgctttttcg ccgttagcgt tgaagtcgga acggttatcc caccagatat ccaggcggcc
    20341 gttggaggaa gcgtaggctg gagtcatacg ttgcaggaag tatccctgct gaccgtcagc
    20401 cttaacccag gtgccttcga ggcgcaaatc cactacgtca gccgcccggt aaccaaaggt
    20461 caacgcttgc agccaggcgg tgccgtcata aaggtcgttg acgctgcgat cgtcaacttt
    20521 atcgcgcgta ccatagaact ggtagctggt ggttaacggg ctaccggcga tatcaaattt
    20581 gtagctggct ttggcaaaat attgatcgat atacccttcc gcctgaccaa atgccgcttc
    20641 cagtacgaag ttatttttga agtcgtattt cgccccaagg gagtgcagat aatcaacttt
    20701 ggtggtttta tcgttctgat aaaactcatc catttccaga tgccacggcg ctttgtattc
    20761 gttggtccac atgtaggaga aactcaacgc accagcatcg ccgtaatcaa aattcgcccc
    20821 ggcttccgcc ccctgataag tacctggcat aaagctccag tgcggcgcta acagcgtttg
    20881 accagttggc tgaatgtaac ctgccctcgc ccaaaccgga ccgtatttaa atttggccgc
    20941 agctttatac aggcttatac cgcttttgtc gccggaccag tcttcgtcat aggctttatt
    21001 actttttgaa aacgcgattt cgttcgggtg ggagctgtcg ccgttttccg ccatttcaat
    21061 cgccgtaaac acagcaatat caaggccgaa catatcagca gcataaccgg actgaaaatc
    21121 gaggttggca ttccaggtgg agtgagaaag gttggttttg tatttgtcgc cgtcggtaac
    21181 atctttacgg tcgcgttcac gctgccagta atatataccg ccggttaagg ttgaatcgtc
    21241 gatgaatcct tcggcgcgag cctccggcat tgccataaag cccgacattg ctgtaacacc
    21301 ggcgatagcc agcgccagcg tactacgttt gccactaaac gtacgcatgg gttaatcctc
    21361 tttgacgtat aaattgctgc accaaaggtg aacagcgaaa aaaataaaaa ttaaaaaagt
    21421 agcattgaga aaagtctcgc tgactacagg aatagactat ttttcgcgac gcgaattatc
    21481 aatctctttc tgtaaccaga atgtaagaac atgagcaacc gcacatattt tgatgatttt
    21541 tgttacaagg cttaagtttg cggttgaaag gcttgcagaa gaataaaagc gtaaatttcc
    21601 agcaagatga aagcggttac attttattta attatggttt gtgattttaa atttatttta
    21661 tggataaatt gcgaagcgga attaattcgc gaagaaaagc agaaaaaacg ccgcagagtg
    21721 cggcgtttgg gattgtttgc tatttcttgc cggatgcgac gtaaatgcct cacccggcct
    21781 ggtagaactt aaaattactc gcctactttc gcccaggtat cacgcagccc aacggtgcgg
    21841 ttaaataccg gtttttccgc tgtggaatgg cggctgtcga ggcagaagta accttcacgc
    21901 tcaaactgga atgctttacc cgcaaccgca tctttcagcg acggttcagc aaagccctgt
    21961 ttgatcacca gcgattccgg gttaatcacc gacaggaaat catccgcagc acctgggtta
    22021 ggcacgctga acagacggtc gtacagacgg atttcaaccg gcagcgcatg tgccgcgctc
    22081 acccagtgaa taacaccttt gactttacga ccatctgccg gatctttgct taaggtgtcg
    22141 gcgtcataag tacagaagat ggtggtgata ttgccttcgg catctttctc cacgcgttct
    22201 gccttaatga cgtaagcatt acgcagacgc acttctttac ccagcaccag acgtttgtac
    22261 tgcttgttag cttcttcgcg gaaatcggcg cgatcgatcc aaatctcact gctaaacggc
    22321 acctggcggc tacccatttc cggtttgttc ggatggttcg gcatggtaac catttcgcct
    22381 tcgccctgat agttttcgat aaccagtttc accggatcga taaccgccat tgcgcgcggg
    22441 gcgttttcgt tgagatcttc acggatgcag gattccagcg acgccatctc aatggtgttg
    22501 tcctgcctgg tcacgccgat gcgtttgcag aactcacgaa tagaagcagc agtgtaacca
    22561 cgacgacgca gaccggaaat ggtcggcata cgcgggtcat cccagccttc aacgtgcttg
    22621 tcggtcacca gcaggttcag cttacgcttg gacatcacag tgtattccag attcaggcgc
    22681 gagaattcgt actggcgcgg gtgaacagga atggtgatgt tgtccagcac ccagtcgtac
    22741 aggcgacggt tgtcctggaa ctcaagcgta cacagagagt gcgtaatacc ttccagggca
    22801 tcgctgatgc agtgggtgaa gtcgtacatc gggtagatgc accacttgtt gccagtctgg
    22861 tggtgttcag caaatttaat gcggtacagc accggatcgc gcatcacgat aaacggtgaa
    22921 gccatgtcga ttttcgcacg caggcaggct ttaccttctt caaaaccacc ggcacgcatt
    22981 ttttcgaaca gcgccaggtt ctcttcaacg ctgcggtcgc ggtacgggct gtttttaccc
    23041 ggttgcgtca gggtgccgcg gtattcgcgg atctgttccg gcgtcagttc atcaacgtac
    23101 gccaggcctt tattgatcag ttcgatcgca taggcgtgga gctgatcaaa ataatcggag
    23161 gagtaacgga cgttaccaga ccagtgaaaa cctaaccact ctacgtcgtt tttgatcgac
    23221 tcaacatact cgatatcttc ttttaccggg ttagtgtcgt cgaaacgcag gttgcactgg
    23281 cctttatagt cctgggcgat cccgaagttc aggcagatag atttcgcatg gccaatatgc
    23341 agatagccat tcggctccgg cgggaaacgg gtgtgtactg tggtgtgctt accactggcc
    23401 agatcttcat cgatgatctg acggataaag ttagtcgggc gggcttctgc ctcactcatc
    23461 gtggattcct caaagcgtaa acaacgtata acggcgtatg atcttataag cggaacaggc
    23521 tgacaactgt tagtttttta aaattgataa tctaacaagg attatgggga tgattgatga
    23581 aaaaaaaagc ggcagagaag atctccaccg cttgtcattg ttggatgcga cgctcaagcg
    23641 tcgcatcagg cataaagcag attacttttt gatttcatac agcggtgttt gacccgccac
    23701 aacatggccc tgagctttaa tgatcaagcc actgaaatcg tcgatattgc tgcaaaccac
    23761 cgggctaatc atcgagcggg cgttagcgtt caggtaatcc agatccattt ccagaatcgg
    23821 ttgccctgcg cttacctgcg caccctcttc caccagacgt ttaaagcctt taccttccag
    23881 cgctacggtg tcgataccca tatggacgac gatctccgcg cctttttcgg tttccaggca
    23941 gaacgcgtgg ttggtgttga agattttcac gattgtccct gcggctggtg atacgacgat
    24001 tttatctgtc ggtttcaccg ccacaccgtc acccaccgct ttgctggcga atgcttcgtc
    24061 aggaacctga tccagtgcca cgacatcacc ggtaatcggc gataccagct ccgcgataga
    24121 taccgcgttt ggtacagcct gcggttttgc tacaggcgcg gcagttgacg gagttgcttc
    24181 agctgacgca gcggctaccg gaccacgggc aacgactttc ttcatcgcat cgccgatgga
    24241 ttctgctttc gcgccaacaa tcacctgaat agtctgtttg ttcagtttca ctacaccaga
    24301 agcacccaga cgtttacaca tcgtatcgtt gacgcgggca gagtcagcca cggtcaggcg
    24361 cagacgggtg atacaggcgt caattgcttt caggttgtca gtgccgccaa ccgcagcaat
    24421 atagttggtc gccagttgat tgaggccttc ttcagtgttg ctgttggctt cttcagtaac
    24481 gatctcatct tctttatctt cacgacccgg cgttttcagg ttgaacatgc ggataaccaa
    24541 actgaacacc acgaagtaga tagcgaagaa gacaacaccc atcaccagca gcatccagac
    24601 gttctggctg gcggccggca ggttatacat caacgcgtag tcgatagccc ccgcagagaa
    24661 agagaagcca gcatggatac ccagcagtgt tgccacaaac aggctgatac cggtcagcag
    24721 tgcgtgcagg aggtacagca gcggtgcaag gaacatgaac aggaattcca gcggctcagt
    24781 cacaccggtc aggaacgcag taacagcaac agaaagcagc atcccgccaa ccatcggacg
    24841 acgctctttc ggtgctgcga agtacatcgc cagcgccgca cccggcagac cgaacatcat
    24901 aatcgggaag aagccggaca tgaacatccc cgcggtgccg tcaccggcat agaagcggtt
    24961 gatatcaccg tggaaaaccg tacccgccgc gttggtgaat tcaccaatct ggaaccaggc
    25021 gatggtgttc agcacctgat gcagaccggt tgggatcagc agacggttga tgaaaccaaa
    25081 gataccggaa cccagcgcgc ccgcagaaac gatccactcg cctcctgcat ggatagcgtg
    25141 ctgtaccggc ggccagacgt aaccaaaaat ggccgccagc accaggcaga agaagccggt
    25201 ggcaatcggc acaaagcgtt tgccgccgaa gaagctcagg aagtccggca gtttaatatc
    25261 ggaccaacgg ttataggctg cgccaccaac cagaccggta atgatacccg ccagtacacc
    25321 catgtttatt tctgggttga tggtcaccat cgctttggtt aacacaaagt aacctaccgc
    25381 acccgccagc gccgccgcac ctgcgctgtc tttcgaccag ctggatgcca caccgatggc
    25441 gaagattaat gcgaggttat caaaaatcgc accgcccgcc tgggcaataa acgcaacgtt
    25501 aagtaaatct ggctgaccga atcgcagcaa cagtgccgcc accggcagca ccgcgatagg
    25561 gagctgtaac gccctaccga gtcgctggaa aaaacctaaa atattcatct tattccccct
    25621 acgagaaccc tatttggctc gtttaaagcc gtatttttat tttgctgcaa attgtactgc
    25681 cgatgttctg taatcagatt gttagatcat ctgctacaga gtgtgtgaaa atttaattcg
    25741 tatcgcaaat taaacgcgtg tcttttgtga gttttgtcac caaatatcgt tatcatcact
    25801 cccttttact ggctaaacca gaaaacttat tttatcattc aaaaaatcag gtcggattga
    25861 cgcctgtctg cgcaaatcca agttacgctt aaagatgcct aatccgccaa cggcttacat
    25921 tttacttatt gaggtgaata atgagactga tccccctgac taccgctgaa caggtcggca
    25981 aatgggctgc tcgccatatc gtcaatcgta tcaatgcgtt caaaccgact gccgatcgtc
    26041 cgtttgttct gggcctgcca actggcggca cgccgatgac cacctataaa gcgttagtcg
    26101 aaatgcataa agcaggccag gtcagcttta agcacgttgt caccttcaac atggacgaat
    26161 atgtcggtct gccgaaagag catccggaaa gctactacag ctttatgcac cgtaatttct
    26221 tcgatcacgt tgatattcca gcagaaaaca tcaaccttct caacggcaac gccccggata
    26281 tcgacgccga atgccgccag tatgaagaaa aaatccgttc ttacggaaaa attcatctgt
    26341 ttatgggcgg tgtaggtaac gacggccata ttgcatttaa cgaaccggcg tcttctctgg
    26401 cttctcgtac tcgtatcaaa accctgactc atgacactcg cgtcgcgaac tctcgtttct
    26461 ttgataacga tgtcaatcag gtgccaaaat atgccctgac tgtcggtgtt ggtacattgc
    26521 tggatgccga agaagtgatg attctggtgc tgggtagcca gaaagcactg gcactgcagg
    26581 ctgcagttga aggttgcgtg aaccacatgt ggaccatcag ctgtctgcaa ctgcatccaa
    26641 aagcgatcat ggtgtgcgat gaaccttcca ccatggagct gaaagttaag actttaagat
    26701 atttcaatga attagaagca gaaaatatca aaggtctgta attgttatcc ctgccctggc
    26761 tccttgctca gggcaatatt ttttaaaatc gggggtcaga atgtatgcat taacccaggg
    26821 ccggatcttt accggccacg aatttcttga tgaccacgcg gttgttatcg ctgatggcct
    26881 gattaaaagc gtctgtccgg tagcggaact gccgccagag atcgaacaac gttcactgaa
    26941 cggggccatt ctctcccccg gttttatcga tgtgcagtta aacggctgcg gcggcgtaca
    27001 gtttaacgac accgctgaag cggtcagcgt ggaaacgctg gaaatcatgc agaaagccaa
    27061 tgagaaatca ggctgtacta actatctgcc gacgcttatc accaccagcg atgagctgat
    27121 gaaacagggc gtgcgcgtta tgcgcgagta cctggcaaga catccgaatc aggcgttagg
    27181 tctgcatctg gaaggtccgt ggctgaatct ggtaaaaaaa ggcacccata atccgaattt
    27241 tgtgcgtaag cctgatgccg cgctggtcga tttcctgtgt gaaaacgccg acgtcattac
    27301 caaagtgacc ctggcaccgg aaatggttcc tgcggaagtc atcagcaaac tggcaaatgc
    27361 cgggattgtg gtttctgccg gtcactccaa cgcgacgttg aaagaagcga aagccggttt
    27421 ccgcgcgggg attacctttg ccacccatct gtacaacgcg atgccgtata ttaccggtcg
    27481 tgaaccgggc ctggcgggcg cgatcctcga cgaagctgac atttattgcg gtattatcgc
    27541 tgatggcctg catgttgatt acgccaacat tcgtaacgct aaacgcctta aaggcgacaa
    27601 actgtgtctg gttaccgacg ccaccgcgcc agcaggtgcc aacattgaac agttcatttt
    27661 tgcgggtaaa acaatatact accgtaacgg actttgtgtg gatgagaacg gtacgttaag
    27721 cggttcatcc ttaaccatga ttgaaggcgt gcgtaatctg gtcgaacatt gcggtatcgc
    27781 actggatgaa gtgctgcgta tggcgacgct ctatccggcg cgtgcgattg gcgttgagaa
    27841 acgtctcggc acactcgccg caggtaaagt agccaacctg accgcattca cacctgattt
    27901 taaaatcacc aagaccatcg ttaacggtaa cgaggtcgta actcaataag agaaagtatg
    27961 acaccaggcg gacaagctca gataggtaat gttgatctcg taaaacagct taacagcgcg
    28021 gcggtttatc gcctgattga ccagtacggg ccaatctcgc ggattcagat tgccgagcaa
    28081 agccagcttg cccccgccag cgtaaccaaa attacgcgtc agcttatcga acgcgggctg
    28141 atcaaagaag ttgatcagca ggcctccacc gggggccgcc gcgctatctc catcgtcacc
    28201 gaaacccgca atttccacgc aatcggcgta cggcttggtc gtcacgacgc caccatcacc
    28261 ctgtttgatc tcagcagcaa agtgctggca gaagaacatt acccgctgcc ggaacgtacc
    28321 cagcaaacgc tggaacatgc cctgttgaat gccattgctc agtttattga tagctaccag
    28381 cgcaaactgc gcgagctgat cgcgatttcg gtgatcctgc cagggcttgt tgacccggac
    28441 agcggcaaaa ttcattacat gccgcatatt caggtagaaa actgggggct ggtagaagct
    28501 ctggaagaac gttttaaagt gacctgtttc gttggtcacg atatccgtag tctggcgctg
    28561 gcggagcact acttcggtgc aagtcaggat tgcgaagact ccattctggt gcgtgtccat
    28621 cgcggaaccg gggccgggat tatctctaac gggcgcattt ttattggccg caacggtaac
    28681 gtcggtgaaa ttggccatat tcaggtcgaa ccgctgggtg aacgctgcca ctgcggcaac
    28741 tttggctgcc tggaaactat cgccgccaac gctgccattg aacaacgggt gttgaatctg
    28801 ttaaagcagg gctaccagag ccgcgtgccg ctggacgact gcaccatcaa aactatctgc
    28861 aaagccgcga acaaaggcga tagtctggcg tcggaagtaa ttgagtatgt cggtcgtcat
    28921 ctgggtaaaa ccatcgccat tgctatcaac ttatttaatc cgcaaaaaat tgttattgcc
    28981 ggtgaaatca ccgaagccga taaagtgctg ctccctgcta ttgaaagctg cattaatacc
    29041 caggcgctga aggcgtttcg cactaatctg ccggtggtac gttctgagct ggatcaccgc
    29101 tcggcaatcg gcgcttttgc gctggtaaaa cgcgccatgc tcaacggtat tttgctccag
    29161 catttgctgg aaaattaatg tgcttttata gtggcgctta ttgttgtcaa tattctgggt
    29221 agtccatgac cattaaaaat gtaatttgcg atatcgatgg cgtgctgatg cacgataacg
    29281 tcgccgtacc gggtgcagcg gaatttttgc acgggattat ggataaaggc ctgccgctgg
    29341 tgttgctgac caactatcct tcgcagactg ggcaagatct ggcgaaccgc tttgccaccg
    29401 caggtgtcga tgtacctgac agcgtgtttt atacctctgc gatggcgact gccgatttcc
    29461 tgcgtcgcca ggaaggcaag aaagcgtatg tggtgggcga aggcgcactg attcatgaac
    29521 tgtacaaagc cggtttcact attaccgatg tgaaccctga tttcgtgatt gttggcgaaa
    29581 cgagttccta caactgggac atgatgcata aagcagccta tttcgtcgct aacggtgcac
    29641 gttttatcgc caccaatccg gacacccacg ggcgcggttt ttatcccgcg tgtggcgcgt
    29701 tgtgtgcagg catcgaaaaa atctccgggc gtaaaccgtt ctatgttggt aaaccgagtc
    29761 cgtggatcat ccgcgcggca ttaaacaaaa tgcaggcgca ttcggaagaa acggtgattg
    29821 tcggcgataa cctgcgtacc gatattctgg cgggcttcca ggcaggtctg gaaacgattc
    29881 tggtgctttc tggtgtttca tcgctcgacg atatcgacag tatgccgttc cgcccaagct
    29941 ggatttaccc gtcggtcgct gaaatcgacg ttatctgaat agcaaccacg tctgcggacg
    30001 tggttggctc tgatgacaaa cgccaaactg cctgatgcgc tacgcttatc aggcctacgc
    30061 agctcctgca atatattgaa ttttcatgct tttgtaggcc ggataaggcg ttcacgccgc
    30121 atccggcatg aacaaattgc actttgtcag caatttggcc cccgtaaaat acaaacattc
    30181 aataaaaccc gctgaaaatt atcgattcat caataaatat atcctcacac cagacctttt
    30241 ttcaccaatc gacaatcacc attacgtttt ttattttttc accgccaaat cgcttgcgca
    30301 cagtgctgct ttgcggcatt tttttaaaca agcaaacaca acaagcaaca aataccagat
    30361 taacggagaa ggttatgtgt tcaatttttg gcgtattcga tatcaaaaca gacgcagttg
    30421 agctgcgtaa gaaagcactc gagctgtcac gcctgatgcg tcatcgtggc ccggactggt
    30481 ccggtattta tgccagcgat aacgccattc tcgctcacga acgtctgtca attgttgacg
    30541 ttaacgcggg ggcgcaacct ctctacaacc aacaaaaaac ccacgtactg gcggtaaacg
    30601 gtgaaatcta caaccaccag gcattgcgcg ctgaatatgg cgatcgttat cagttccaga
    30661 cagggtctga ctgtgaagtg atcctcgcgc tgtatcagga aaaagggccg gaatttctcg
    30721 acgacttgca gggcatgttt gcctttgccc tgtacgacag cgaaaaagat gcctacctga
    30781 ttggtcgcga ccatctgggg atcatcccac tgtatatggg ctatgacgaa cacggtcagc
    30841 tgtatgtggc ctcagaaatg aaatcgctgg tgccagtttg ccgcacgatt aaagagttcc
    30901 cggcggggag ctatttgtgg agccaggacg gcgaaatccg ttcttattat catcgcgact
    30961 ggttcgactt tgatgcagtg aaagataacg tgaccgacaa aaacgagctg cgtcaggctc
    31021 tggaagattc cgttaaaagc catctgatgt ctgatgtgcc ttacggtgtg ctgctttctg
    31081 gtggtctgga ttcctcaatt atttccgcta tcaccaagaa atacgcagcc cgtcgcgtgg
    31141 aagatcagga acgctctgaa gcctggtggc cgcagttaca ctcctttgct gtaggtctgc
    31201 cgggttcacc ggatcttaaa gcagcccagg aagtggcaaa ccatctgggc acggtgcatc
    31261 acgaaattca cttcactgta caggaaggtc tggatgccat ccgcgacgtg atttaccaca
    31321 tcgaaactta tgatgtgacc actattcgcg cttcaacacc gatgtattta atgtcgcgta
    31381 agatcaaggc gatgggcatt aaaatggtgc tgtccggtga aggttctgat gaagtgtttg
    31441 gcggttatct ttacttccat aaagcgccca acgctaaaga actgcatgaa gagacggtgc
    31501 gtaaactgct ggccctgcat atgtatgact gcgcgcgcgc caacaaagcg atgtcagcct
    31561 ggggcgtgga agcacgcgtt ccgttcctcg acaaaaaatt ccttgatgtg gcgatgcgca
    31621 ttaacccgca ggataaaatg tgcggtaacg gcaaaatgga aaaacacatc ctgcgtgaat
    31681 gttttgagtc atacctgccc gcaagcgtgg cctggcggca gaaagagcag ttctccgatg
    31741 gcgtcggtta cagttggatc gacaccctga aagaagtggc ggcgcagcag gtttctaatc
    31801 agcaactgga aactgcccgc ttccgcttcc cgtacaacac gccaacctca aaagaagcgt
    31861 atctgtaccg ggagatcttt gaagaactgt tcccgcttcc gagcgccgct gagtgcgtgc
    31921 ctggcggtcc ttccgtcgcg tgttcttccg ctaaagcgat cgaatgggat gaagcgttca
    31981 agaaaatgga cgatccatct ggtcgtgcgg ttggtgttca ccagtcggca tataagtaag
    32041 aaatgcgaaa cagccccggt gaaatccggg gctgtttcag ttattgaggt gcttgttgat
    32101 tctgatatgc agtaaggaaa tgttccgggt ttgccacatc actgtttgac aactcatcac
    32161 tgtaggccag tatttcatag attaatttcc caccactatt gttgaattcc gaatttcatc
    32221 ctgtacgaca aaagaatggc tgtagggtgg ggaaaaaaca caaagtaaac aataattgac
    32281 taatatagcg ccacgctgtt cgcaacctaa ccaaatagtc actttcgagc aattttcctt
    32341 gaaaaagagg ttgacgctgc aaggctctat acgcataatg cgccccgcaa cgccgataag
    32401 gtatcgcgaa aaaaaagatg gctacgtagc tcagttggtt agagcacatc actcataatg
    32461 atggggtcac aggttcgaat cccgtcgtag ccaccatctt tttggcggga gtggcgaaat
    32521 tggtagacgc accagattta ggttctggcg ccgcaaggtg tgcgagttca agtctcgcct
    32581 cccgcaccat tcaccagaaa gtgttgtacg gatggggtat cgccaagcgg taaggcaccg
    32641 gtttttgata ccggcattcc ctggttcgaa tccaggtacc ccagccatct tcttcgagta
    32701 agcggttcac cgcccggtta ttggggtatc gccaagcggt aaggcaccgg tttttgatac
    32761 cggcattccc tggttcgaat ccaggtaccc cagccat
//
LOCUS       DADMJE010000030        32488 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.031, whole genome shotgun sequence.
ACCESSION   DADMJE010000030 DADMJE010000000
VERSION     DADMJE010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 32488)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 32488)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..32488
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.031"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            197..991
                     /gene="panB"
                     /locus_tag="JN001_001254"
     CDS             197..991
                     /gene="panB"
                     /locus_tag="JN001_001254"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HAY9052547.1"
                     /translation="MKPTTIASLQKCKQDKKRFATITAYDYSFAKLFADEGLNVMLVG
                     DSLGMTVQGHDSTLPVTVADIAYHTASVRRGAPNCLLLADLPFMAYATPEQAFENAAT
                     VMRAGANMVKIEGGEWLVETVKMLTERAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAG
                     DQLLSDALALEAAGAQLLVLECVPVELAKRITEALAIPVIGIGAGNVTDGQILVMHDA
                     FGITGGHIPKFAKNFLAETGDIRAAVRQYMAEVESGVYPGEEHSFH"
     gene            1003..1854
                     /gene="panC"
                     /locus_tag="JN001_001255"
     CDS             1003..1854
                     /gene="panC"
                     /locus_tag="JN001_001255"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HAY9052548.1"
                     /translation="MLIIETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEA
                     KARADVVVVSIFVNPMQFDRPEDLARYPRTLQEDCEKLNKRKVDLVFAPSVKEIYPNG
                     TETHTYVDVPGLSTMLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIR
                     KMVADMGFDIEIVGVPIMRAKDGLALSSRNGYLTAEQRKIAPGLYKVLSSIADKLQAG
                     ERDLDEIIAIAGQELNEKGFRADDIQIRDADTLLEVSETSKRAVILVAAWLGDARLID
                     NKIVELA"
     gene            complement(2146..3042)
                     /locus_tag="JN001_001256"
     CDS             complement(2146..3042)
                     /locus_tag="JN001_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY9052549.1"
                     /translation="MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTL
                     HLESGSFIEESLKGHSTDVLYSVQMQGNPGYLHVVIEHQGKPDKKMAFRMMRYSIAAM
                     HRHLEADHDKLPLVVPILFYQGEATPYPLSMCWFDIFYSPELARRVYNSPFPLVDITI
                     TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQR
                     GHTEQADLFYGVLRDRETGGESMMTLAQWFEEKGIEKGIQQGRQEERQEFAQRFLSKG
                     MSREDVAEMTNLSLAEIDRLIN"
     gene            3316..3696
                     /gene="panD"
                     /locus_tag="JN001_001257"
     CDS             3316..3696
                     /gene="panD"
                     /locus_tag="JN001_001257"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HAY9052550.1"
                     /translation="MIRTMLQGKLHRVKVTHADLHYEGSCAIDQDFLDAAGILENEAI
                     DIWNVTNGKRFSTYAIAAERGSRIISVNGAAAHCASVGDIVIIASFVTMPDEEARTWR
                     PNVAYFEGDNEMKRTAKAIPVQVA"
     gene            complement(3700..4900)
                     /locus_tag="JN001_001258"
                     /pseudo
     CDS             complement(3700..4900)
                     /locus_tag="JN001_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000899461.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
     gene            complement(4995..5435)
                     /locus_tag="JN001_001259"
     CDS             complement(4995..5435)
                     /locus_tag="JN001_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HAY9052551.1"
                     /translation="MLGWVITCHDDRAQEILDALEKKHGALLQCRAVNFWRGLSSNML
                     SRMMCDALHEADSGEGVIFLTDIAGAPPYRVASLLSHKHSRCEVISGVTLPLIEQMMA
                     CRETMTSSEFRERIVELGAPEVSSLWHQQQKNPPFVLKHNLYEY"
     gene            complement(5540..6310)
                     /locus_tag="JN001_001260"
     CDS             complement(5540..6310)
                     /locus_tag="JN001_001260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9052552.1"
                     /translation="MMHLYWVALKSIWAKEIHRFMRIWVQTLVPPVITMTLYFIIFGN
                     LIGSRIGDMHGFSYMQFIVPGLIMMSVITNAYANVASSFFGAKFQRNIEELLVAPVPT
                     HVIIAGYVGGGVARGLFVGILVTAISLFFVPFQVHSWVFVALTLVLTAVLFSLAGLLN
                     GVFAKTFDDISLVPTFVLTPLTYLGGVFYSLTLLPPFWQGLSHLNPIVYMISGFRYGF
                     LGINDVPLATTFGVLVVFIVVFYLICWSLIQRGRGLRS"
     gene            complement(6307..7233)
                     /locus_tag="JN001_001261"
     CDS             complement(6307..7233)
                     /locus_tag="JN001_001261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9052553.1"
                     /translation="MTIALELQQLKKTYPGGVQALRGIDLQVEAGDFYALLGPNGAGK
                     STTIGIISSLVNKTSGRVSVFGYDLEKDVVNAKRQLGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVERKEAYIRSEKYLKQLDLWGKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRRSMWGFLKDLNDKGTTIILTTHYLEEAEMLCRNIGIIQHGELVENT
                     SMKALLAKLKLETFILDLAPKSPLPKLDGYQYRLVDTATLEVEVLREQGINSVFTQLS
                     EQGIQVLSMRNKANRLEELFVSLVNEKQGDRA"
     gene            7342..8004
                     /gene="can"
                     /locus_tag="JN001_001262"
     CDS             7342..8004
                     /gene="can"
                     /locus_tag="JN001_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonate dehydratase"
                     /protein_id="HAY9052554.1"
                     /translation="MKDIDTLISNNALWSKMLVEEDPGFFEKLAQAQKPHFLWIGCSD
                     SRVPAERLTGLEPGELFVHRNVANLVIHTDLNCLSVVQYAVDVLEVEHIIICGHYGCG
                     GVQAAVENPELGLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGH
                     STIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLKHAN
                     HK"
     gene            complement(8045..8581)
                     /gene="hpt"
                     /locus_tag="JN001_001263"
     CDS             complement(8045..8581)
                     /gene="hpt"
                     /locus_tag="JN001_001263"
                     /EC_number="2.4.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypoxanthine phosphoribosyltransferase"
                     /protein_id="HAY9052555.1"
                     /translation="MKHTVEVMIPEAEIKARIAELGRQITERYKDSGSDMVLVGLLRG
                     SFMFMADLCREVQVSHEVDFMTASSYGSGMSTTRDVKILKDLDEDIRGKDVLIVEDII
                     DSGNTLSKVREILSLREPKSLAICTLLDKPSRREVNVPVEFIGFSIPDEFVVGYGIDY
                     AQRYRHLPYIGKVILLDE"
     gene            8787..11177
                     /locus_tag="JN001_001264"
     CDS             8787..11177
                     /locus_tag="JN001_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone-dependent
                     dehydrogenase"
                     /protein_id="HAY9052556.1"
                     /translation="MAINNTGSRRLLVTLTVLFAALCGLYLLIGGGWLVAIGGSWYYP
                     IAGLVMLGVAWMLWRSKRAALWLYAALLLGTMIWGVWEVGFDFWALTPRSDILVFFGI
                     WLILPFVWRRLVIPASGAVAALVVALLISGSILTWAGFNDPQEINGTLSADATPTEAI
                     SPVADQDWPAYGRNQEGQRFSPLKQINADNVHNLKEAWVFRTGDVKQPNDPGEITNEV
                     TPIKVGDTLYLCTAHQRLFALDAASGKEKWHYDPKLKTNESFQHVTCRGISYHEAKAE
                     TASPEVMADCPRRIILPVNDGRLIAINAENGKLCETFANKGVLNLQSNMPDTKPGLYE
                     PTSPPIITDKTIVMAGSVTDNFSTRETSGVIRGFDVNTGELLWAFDPGAKDPNAIPSD
                     EHTFTFNSPNSWAPAAYDAKLDLVYLPMGVTTPDIWGGNRTPEQERYASSILALNATT
                     GKLAWSYQTVHHDLWDMDLPAQPTLADITVNGQKVPVIYAPAKTGNIFVLDRRNGELV
                     VPAPEKPVPQGAAKGDYVTPTQPFSELSFRPKKDLSGADMWGATMFDQLVCRVMFHQM
                     RYEGIFTPPSEQGTLVFPGNLGMFEWGGISVDPNREVAIANPMALPFVSKLIPRGPGN
                     PMEQPKDAKGTGTESGIQPQYGVPYGVTLNPFLSPFGLPCKQPAWGYISALDLKTNEV
                     VWKKRIGTPQDSMPFPMPVPVPFNMGMPMLGGPISTAGNVLFIAATADNYLRAYNMSN
                     GEKLWQGRLPAGGQATPMTYEVNGKQYVVISAGGHGSFGTKMGDYIVAYALPDDVK"
     gene            complement(11224..12774)
                     /gene="cueO"
                     /locus_tag="JN001_001265"
     CDS             complement(11224..12774)
                     /gene="cueO"
                     /locus_tag="JN001_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase CueO"
                     /protein_id="HAY9052557.1"
                     /translation="MQRRDFLKYSVALGVASALPLWSRAVFAAERPTLPIPDLLTTDA
                     RNRIQLTIGAGQSTFGEKTATTWGYNGNLLGPAVKLQRGKAVTVDIYNQLTEETTLHW
                     HGLEVPGEVDGGPQGIIPPGGKRSVTLNVDQPAATCWFHPHQHGKTGRQVAMGLAGLV
                     VIEDDEILKLMLPKQWGIDDVPVIVQDKKFNADGQIDYQLDVMTAAVGWFGDTLLTNG
                     AIYPQHAAPRGWLRLRLLNGCNARSLNFATSDNRPLYVIASDGGLLPEPVKVSELPVL
                     MGERFEVLVEVNDNKPFDLVTLPVSQMGMAIAPFDKPHPVMRIQPIAISASGALPDTL
                     SSLPALPSLEGLTVRKLQLSMDPMLDMMGMQMLMEKYGDQAMAGMDHSQMMGHMGHGN
                     MNHMNHGGKFDFHHANKINGQAFDMNKPMFAAAKGQYERWVISGVGDMMLHPFHIHGT
                     QFRILSENGKPPAAHRAGWKDTVKVEGNVSEVLVKFNHDAPKEHAYMAHCHLLEHEDT
                     GMMLGFTV"
     gene            12940..13287
                     /locus_tag="JN001_001266"
     CDS             12940..13287
                     /locus_tag="JN001_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414664.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacC family pilotin-like protein"
                     /protein_id="HAY9052558.1"
                     /translation="MKTFFRTVLFGSLMAVCANSYALSESEAEDMADLTAVFVFLKND
                     CGYQNLPNGQIRRALVFFAQQNQWDLSNYDTFDMKALGEDSYRDLSGIGIPVAKKCKA
                     LARDSLSLLAYVK"
     gene            13392..14258
                     /gene="speE"
                     /locus_tag="JN001_001267"
     CDS             13392..14258
                     /gene="speE"
                     /locus_tag="JN001_001267"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HAY9052559.1"
                     /translation="MAEKKQWHETLHDQFGQYFAVDNVLYHEKTDHQDLIIFENAAFG
                     RVMALDGVVQTTERDEFIYHEMMTHVPLLAHGHAKHVLIIGGGDGAMLREVTRHKNVE
                     SITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCT
                     DPIGPGESLFTSAFYEGCKRCLNPSGIFVAQNGVCFLQQEEAIDSHRKLSHYFSDVGF
                     YQAAIPTYYGGIMTFAWATDNDALRHLSTEIIQARFLASGLKCRYYNPAIHTAAFALP
                     QYLQDALASQPS"
     gene            14274..15068
                     /gene="speD"
                     /locus_tag="JN001_001268"
     CDS             14274..15068
                     /gene="speD"
                     /locus_tag="JN001_001268"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HAY9052560.1"
                     /translation="MKKLKLHGFNNLTKSLSFCIYDICYAKTAEERDGYIAYIDELYN
                     ANRLTEILSETCSIIGANILNIARQDYEPQGASVTILVSEEPVDPKLIDKTEHPGPLP
                     ETVVAHLDKSHICVHTYPESHPEGGLCTFRADIEVSTCGVISPLKALNYLIHQLESDI
                     VTIDYRVRGFTRDINGMKHFIDHEINSIQNFMSDDMKALYDMVDVNVYQENIFHTKML
                     LKEFDLKHYMFHTKPEDLTDSERQEITAALWKEMREIYYGRNMPAV"
     gene            complement(15105..15467)
                     /locus_tag="JN001_001269"
     CDS             complement(15105..15467)
                     /locus_tag="JN001_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414661.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YacL family protein"
                     /protein_id="HAY9052561.1"
                     /translation="MDYEFLRDITGVVKVRMSMGHEVVGHWFNEEVKENLALLDEVEQ
                     AAHALKGSERSWQRAGHEYTLWMDGEEVMVRANQLEFAGDEMEEGMNYYDEESLSLCG
                     VEDFLQVVAAYRNFVQQK"
     gene            complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JN001_001270"
     CDS             complement(15642..18239)
                     /gene="acnB"
                     /locus_tag="JN001_001270"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aconitate hydratase
                     2/2-methylisocitrate dehydratase"
                     /protein_id="HAY9052562.1"
                     /translation="MLEEYRKHVAERAAEGIAPKPLDANQMAALVELLKNPPAGEEEF
                     LLDLLTNRVPPGVDEAAYVKAGFLAAIAKGEAKSPLLTPEKAIELLGTMQGGYNIHPL
                     IDALDDAKLAPIAAKALSHTLLMFDNFYDVEEKAKAGNEYAKQVMQSWADAEWFLNRP
                     ALAEKLTVTVFKVTGETNTDDLSPAPDAWSRPDIPLHALAMLKNAREGIEPDQPGVVG
                     PIKQIEALQQKGFPLAYVGDVVGTGSSRKSATNSVLWFMGDDIPHVPNKRGGGLCLGG
                     KIAPIFFNTMEDAGALPIEVDVSNLNMGDVIDVYPYKGEVRNHETGELLATFELKTDV
                     LIDEVRAGGRIPLIIGRGLTTKAREALGLPHSDVFRQAKDVAESDRGFSLAQKMVGRA
                     CGVKGIRPGAYCEPKMTSVGSQDTTGPMTRDELKDLACLGFSADLVMQSFCHTAAYPK
                     PVDVNTHHTLPDFIMNRGGVSLRPGDGVIHSWLNRMLLPDTVGTGGDSHTRFPIGISF
                     PAGSGLVAFAAATGVMPLDMPESVLVRFKGKMQPGITLRDLVHAIPLYAIKQGLLTVE
                     KKGKKNIFSGRILEIEGLPDLKVEQAFELTDASAERSAAGCTIKLNKEPIIEYLNSNI
                     VLLKWMIAEGYGDRRTLERRIQGMEKWLANPELLEADADAEYAAVIDIDLADIKEPIL
                     CAPNDPDDARPLSAVQGEKIDEVFIGSCMTNIGHFRAAGKLLDAHKGQLPTRLWVAPP
                     TRMDAAQLTEEGYYSVFGKSGARIEIPGCSLCMGNQARVADGATVVSTSTRNFPNRLG
                     TGANVFLASAELAAVAALIGKLPTPEEYQTYVAQVDKTAVDTYRYLNFNQLSQYTEKA
                     DGVIFQTAV"
     gene            18594..20447
                     /locus_tag="JN001_001271"
     CDS             18594..20447
                     /locus_tag="JN001_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3300 domain-containing protein"
                     /protein_id="HAY9052563.1"
                     /translation="MKMTLPFKPHVLALICSAGLCAASAGLYIKSRTVEAAVETQSTQ
                     LAVSDAAAVTLPATVSAPPVTPAVVKSAFSTAQIDQWVAPVALYPDALLSQVLMASTY
                     PANVAQAVQWSHDNPLKQGDAAIQAVSDQPWDASVKSLVAFPQLMALMGENPQWVQNL
                     GDAFLAQPQDVMDSVQRLRQLAQQTGSLKSSNEQKVITTTKKAVPVKQTVTAPVIPSN
                     TVLTASPVITEPATTVISIEPANPDVVYIPNYNPTVVYGNWANTAYPPVYLPPPAGEP
                     FIDSFVRGFGYSMGVATTYALFSSIDWDDDDHDHHHHDDDDYHHHDGGHRDGNGWQHN
                     GDNINIDVNNFNRITGEHLTDKNMAWRHNPNYRNGVPYHDQDMAKRFHQTDVNGGMSA
                     TQLPAPTRDSQRQAAASQFQQRTHAAPVITRDTQRQAAAQRFNEAEHYGSYDDFRDFS
                     RRQPLTQQQKDAARQRYQSASPEQRQAVRERMQTNPQIQQRREAARERIQPASPEQRQ
                     AVREKMQTNPQIQQRRDAARERIQSASPEQRQVFKEKVQQRPLNQQQRDNARQRVQSA
                     SPEQRQVFRERVQESRPQRLNDSNRTARLNNDQRSAVRERLSERGARRLER"
     gene            complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JN001_001272"
     CDS             complement(20518..21942)
                     /gene="lpdA"
                     /locus_tag="JN001_001272"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HAY9052564.1"
                     /translation="MSTEIKTQVVVLGAGPAGYSAAFRCADLGLETVIVERYNTLGGV
                     CLNVGCIPSKALLHVAKVIEEAKALAEHGIVFGEPKTDIDKIRTWKEKVINQLTGGLA
                     GMAKGRKVKVVNGLGKFTGANTLEVEGENGKTVINFDNAIIAAGSRPIQLPFIPHEDP
                     RIWDSTDALELKEVPERLLVMGGGIIGLEMGTVYHALGSQIDVVEMFDQVIPAADKDI
                     VKVFTKRISKKFNLMLETKVTAVEAKEDGIYVTMEGKKAPAEPQRYDAVLVAIGRVPN
                     GKNLDAGKAGVEVDDRGFIRVDKQLRTNVPHIFAIGDIVGQPMLAHKGVHEGHVAAEV
                     IAGKKHYFDPKVIPSIAYTEPEVAWVGLTEKEAKEKGISYETATFPWAASGRAIASDC
                     ADGMTKLIFDKESHRVIGGAIVGTNGGELLGEIGLAIEMGCDAEDIALTIHAHPTLHE
                     SVGLAAEVFEGSITDLPNPKAKKK"
     gene            complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JN001_001273"
     CDS             complement(22267..24159)
                     /gene="aceF"
                     /locus_tag="JN001_001273"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex
                     dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HAY9052565.1"
                     /translation="MAIEIKVPDIGADEVEITEILVKVGDKVEAEQSLITVEGDKASM
                     EVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADGAADAAPAQAEEKKEAAPAAAPAA
                     AAAKDVNVPDIGSDEVEVTEILVKVGDKVEAEQSLITVEGDKASMEVPAPFAGTVKEI
                     KVNVGDKVSTGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAAGVKEVNVPDIGGDE
                     VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIM
                     IFEVEGAAPAAAPAKQEAAAPAPAAKAEAPAAAPAAKAEGKSEFAENDAYVHATPLIR
                     RLAREFGVNLAKVKGTGRKGRILREDVQAYVKEAIKRAEAAPAATGGGIPGMLPWPKV
                     DFSKFGEIEEVELGRIQKISGANLSRNWVMIPHVTHFDKTDITELEAFRKQQNEEAAK
                     RKLDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGVAVDTPNGLVV
                     PVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVN
                     APEVAILGVSKSAMEPVWNGKEFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSD
                     IRRLVM"
     gene            complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JN001_001274"
     CDS             complement(24174..26837)
                     /gene="aceE"
                     /locus_tag="JN001_001274"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring),
                     homodimeric type"
                     /protein_id="HAY9052566.1"
                     /translation="MSERFPNDVDPIETRDWLQAIESVIREEGVERAQYLIDQLLAEA
                     RKGGVNVAAGTGISNYINTIPVEEQPEYPGNLELERRIRSAIRWNAIMTVLRASKKDL
                     ELGGHMASFQSSATIYDVCFNHFFRARNEQDGGDLVYFQGHISPGVYARAFLEGRLTQ
                     EQLDNFRQEVHGNGLSSYPHPKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLEHRGLK
                     DTSKQTVYAFLGDGEMDEPESKGAITIATREKLDNLVFVINCNLQRLDGPVTGNGKII
                     NELEGIFEGAGWNVIKVMWGSRWDELLRKDTSGKLIQLMNETVDGDYQTFKSKDGAYV
                     REHFFGKYPETAALVADWTDEQIWALNRGGHDPKKIYAAFKKAQETKGKATVILAHSI
                     KGYGMGDAAEGKNIAHQVKKMNMDGVRHIRDRFNVPVSDADIEKLPYITFPEGSEEHT
                     YLHAQRQKLHGYLPSRQPNFTEKLELPSLQDFGALLEEQSKEISTTIAFVRALNVMLK
                     NKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDEKGQIL
                     QEGINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQQARGFL
                     IGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEK
                     QENVYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETIEGSKGKVQLLGSGSILRHVR
                     EAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMNDAPA
                     VASTDYMKLFAEQVRTYVPADDYRVLGTDGFGRSDSRENLRHHFEVDASYVVVAALGE
                     LAKRGEIDKKVVADAIAKFNIDADKVNPRLA"
     gene            complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JN001_001275"
     CDS             complement(26998..27762)
                     /gene="pdhR"
                     /locus_tag="JN001_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex transcriptional
                     repressor PdhR"
                     /protein_id="HAY9052567.1"
                     /translation="MAYSKIRQPKLSDVIEQQLEFLILEGTLRPGEKLPPERELAKQF
                     DVSRPSLREAIQRLEAKGLLLRRQGGGTFVQSSLWQSFSDPLVELLSDHPESQYDLLE
                     TRHALEGIAAYYAALRSTDEDKERIRELHHAIELAQQSGDLDAESNAVLQYQIAVTEA
                     AHNVVLLHLLRCMEPMLAQNVRQNFELLYSRREMLPLVSSHRTRIFEAIMAGKPEEAR
                     EASHRHLAFIEEILLDRSREESRRERSLRRLEQRKN"
     gene            28303..29676
                     /gene="aroP"
                     /locus_tag="JN001_001276"
     CDS             28303..29676
                     /gene="aroP"
                     /locus_tag="JN001_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transporter AroP"
                     /protein_id="HAY9052568.1"
                     /translation="MMEGQQHGEQLKRGLKNRHIQLIALGGAIGTGLFLGSASVIQSA
                     GPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVL
                     YVLVAMAELTAVGKYIQFWYPEIPTWVSAAVFFVVINAINLTNVKVFGEMEFWFAIIK
                     VIAVVAMIIFGGWLLFSGNSGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLE
                     LVGITAAEADNPEQSIPKATNQVIYRILIFYIGSLAVLLSLMPWTRVTADTSPFVLIF
                     HELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNAPKALASVDKRGVPV
                     NTILVSALVTALCVLINYLAPESAFGLLMALVVSALVINWAMISLAHMKFRRAKQEQG
                     VVTRFPALLYPLGNWICLLFMAAVLVIMLMTPGMAISVYLIPVWLIVLGIGYLFKEKT
                     AKAVKAH"
     gene            complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JN001_001277"
     CDS             complement(29719..30573)
                     /gene="ampE"
                     /locus_tag="JN001_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase regulator AmpE"
                     /protein_id="HAY9052569.1"
                     /translation="MTLFTTLLVLIFERLFKLGEHWQLDHRLEAFFRRVKHFSLGRTL
                     GMTIIAMGVTFLLLRALQGVLFNVPTLLVWLLIGLLCIGAGKVRLHYHAYLTAASRND
                     SHARVTMAGELTMIHGVPAGCDEREYLRELQNALLWINFRFYLAPLFWLIVGGIWGPV
                     TLMGYAFLRAWQYWLARYQTPHHRLQSGIDAVLHVLDWVPVRLAGVVYALIGHGEKAL
                     PAWFASLGDFHTSQYQVLTRLAQFSLAREPHVDKVETPKAAVSMAKKTSFVVVVVIAL
                     LTIYGALV"
     gene            complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JN001_001278"
     CDS             complement(30570..31121)
                     /gene="ampD"
                     /locus_tag="JN001_001278"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,6-anhydro-N-acetylmuramyl-L-alanine amidase
                     AmpD"
                     /protein_id="HAY9052570.1"
                     /translation="MLLEQGWLVGARRVPSPHYDCRPDDETPTLLVVHNISLPPGEFG
                     GPWIDALFTGTIDPQAHPFFAEIAHLRVSAHCLIRRDGEIVQYVPFDKRAWHAGVSQY
                     QGRERCNDFSIGIELEGTDTLAYTDAQYQQLAAVTRALIDRYPDIANNMTGHCDIAPD
                     RKTDPGPAFDWARFRALVSKETT"
     gene            31209..32102
                     /gene="nadC"
                     /locus_tag="JN001_001279"
     CDS             31209..32102
                     /gene="nadC"
                     /locus_tag="JN001_001279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HAY9052571.1"
                     /translation="MPPRRYNPDTRRDELLERINLDIPGAVAQALREDLGGTVDANND
                     ITAKLLPENSRSHATVITRENGVFCGKRWVEEVFIQLAGDDVTIIWHVDDGDVINANQ
                     PLFELEGPSRVLLTGERTALNFVQTLSGVASKVRHYVELLEGTNTQLLDTRKTLPGLR
                     SALKYAVLCGGGANHRLGLSDAFLIKENHIIASGSVRQAVEKASWLHPDAPVEVEVEN
                     LEELDEALKAGADIIMLDNFETEQMREAVKRTNGKALLEVSGNVTDKTLREFAETGVD
                     FISVGALTKHVQALDLSMRFR"
     gene            32305..>32488
                     /locus_tag="JN001_001280"
     CDS             32305..>32488
                     /locus_tag="JN001_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY9052572.1"
                     /translation="MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQ
                     TFVPYRTAVELCALEHG"
BASE COUNT         7833 a         8834 c         8004 g         7817 t
ORIGIN      
        1 gccacgctac aacaggatgg aactatacca atagaagctg gtgagtttaa agccaccagt
       61 actttccagg taacctaccc ttaataagtc caccgcaccg ccatcatctg gcggtgcggt
      121 aattgataaa tcattgcccc caccaatgtg actgataaaa tgccaggcaa cacgacatca
      181 tttatcagga cacgttatga aaccgaccac cattgcttca cttcagaaat gtaagcagga
      241 taaaaagcgt ttcgcgacca tcaccgctta cgactacagc ttcgcgaaac tatttgctga
      301 tgaaggactt aacgtcatgc tggtaggcga ctcgctgggc atgacggttc agggtcacga
      361 ctccaccctg ccggtgaccg ttgccgatat cgcctaccac actgcctccg tacgtcgtgg
      421 tgcgccaaac tgcctgctgt tggctgacct gccgtttatg gcgtatgcca cgccggaaca
      481 agcctttgaa aacgccgcaa cggttatgcg tgccggtgcc aatatggtca aaattgaggg
      541 cggtgagtgg ctggtcgaaa ccgtaaaaat gctgaccgaa cgtgccgttc ctgtatgtgg
      601 tcacttaggt ttaaccccac agtcagtgaa tattttcggt ggctacaaag ttcaggggcg
      661 cggcgatgaa gcgggcgatc aactgctcag cgatgcatta gccttagaag ccgctggggc
      721 acagctgctg gtgctggaat gcgtgccggt tgaactggca aaacgtatta ccgaagcact
      781 ggcgatcccg gttattggca ttggcgcagg caacgtcact gacgggcaga tcctcgtgat
      841 gcacgacgcc ttcggcatta ccggcggtca cattcctaaa ttcgctaaaa atttcctcgc
      901 cgaaacgggc gacatccgcg cggctgtgcg gcagtatatg gctgaagtgg agtccggcgt
      961 ttatccgggc gaagaacaca gtttccatta aggagtcacg ttgtgttaat tatcgaaacc
     1021 ctgccgctgc tgcgtcagca aattcgccgc ctgcgtatgg aaggcaagcg cgtggcgctg
     1081 gtgcctacta tgggtaatct gcacgatggc catatgaagc tggtcgacga agccaaagcc
     1141 cgcgccgatg tggtcgtcgt cagtattttc gttaacccga tgcagttcga ccgcccggaa
     1201 gatctggcac gttatccacg gaccttgcag gaggactgcg agaagctaaa caaacgtaaa
     1261 gtggatttag ttttcgcccc ttcggtaaaa gagatctacc cgaacggtac tgaaacccat
     1321 acttacgttg acgttcccgg gctttcgacc atgctggaag gcgcgagccg tccggggcat
     1381 tttcgcggcg tttcgactat cgtcagcaag ctgtttaacc tggtccagcc ggacatcgcc
     1441 tgcttcggtg aaaaggactt tcagcaactg gcgctaatcc gcaaaatggt tgccgatatg
     1501 ggcttcgata ttgaaattgt cggcgtcccg attatgcgcg ccaaagatgg ccttgcgctc
     1561 agttcccgta atggttatct gacggcggaa caacgcaaaa ttgcgcccgg tctgtacaaa
     1621 gttttaagtt caattgccga caaattgcag gctggcgagc gggatcttga tgaaattatt
     1681 gccattgcag ggcaagaact gaatgaaaaa ggcttccgcg ccgatgatat tcagattcgc
     1741 gatgccgaca cgttgctgga agtctctgaa accagcaaac gagctgtaat tctggtagcc
     1801 gcctggcttg gcgatgcccg cctgatcgac aacaaaatcg tcgaactggc gtaatgcttt
     1861 tactctaaat aattcaagtt gcaggaaggc ggcaagcgag tgacaaattc gtcaggaacg
     1921 aatttgccca gccgcaggct ggccttcggt gagagacatg gatgtctctc attaatcccc
     1981 aggagcttac ataagtaagt gactggggtt agcgaacgca gacacagcac atgcaattta
     2041 aagtatgacg agtataactg gcgctacggc tgatggcgcc aattattaat ttgccccacg
     2101 tcatggcgat ggcgtctgta agcaattatt cataacgcag acaacttagt taatcagcct
     2161 atcaatctca gcaagagata aatttgtcat ctctgcaacg tcttcccgag acatcccttt
     2221 actcagaaaa cgctgggcga attcttgcct ttcctcctgt cttccctgct gaatcccctt
     2281 ctcaatccct ttctcttcaa accactgcgc cagcgtcatc atagactccc ctcccgtttc
     2341 cctgtctctc agcacaccat aaaacaaatc cgcttgttca gtatgaccgc gttgcagcat
     2401 atagttttgc atggcaacta actgacttcc gctagtgtac ccttcgtcaa tcagcgtgac
     2461 cagttgctcc agcaataaca ttaagtcgcg ctggcgaata tgtttttgca gtagttcgag
     2521 aatcgcaatc cgccgatgtt gcatgatttc gtcatccggt gtgatggtga tatccaccag
     2581 cgggaaagga ctgttataga cgcgtcgtgc cagctccggc gagtaaaata tatcaaacca
     2641 gcacattgag agcggataag gtgtggcctc gccctgataa aacagtatcg gcaccaccag
     2701 cggcagctta tcgtgatccg cctccagatg ccggtgcatg gcagcaatag aataacgcat
     2761 catgcgaaag gccattttct tatccggctt gccttggtgt tcaatcacaa catgcagata
     2821 accgggattg ccctgcattt gcacggaata gagcacgtcc gtgctgtgtc ctttcaggct
     2881 ctcttcaatg aaactccccg actctaaatg aagcgtgttg aggtcacaaa gttctcgtaa
     2941 ttccactggc aaatgtatct ccagaaagtc gcgagccgtc tccgcgtgca ttaaaaattg
     3001 tttaaacact gcatcatgcg gtgtggtact cggtgcatcc atcttccctg ccttccgtgt
     3061 tgtcttgcgt gaaggcagta tccagtcaag gcgtgccatc gtcagccacc tctttagtgt
     3121 ttaccgagca gcgttcagag aaatttcaat tggttacagc cgttacatgg cacgcttcgg
     3181 cacggtacgc aaactgctga tgtaaatgcc gtcagatgag tagacactaa acaaaaatcg
     3241 ggcaatactg cgtgagaatt tcctcaaagc aggcatcgcc tgcttcgtta acgacagggt
     3301 agaaaggtag aagttatgat tcgcacgatg ctgcagggca aactccaccg cgtgaaagtg
     3361 actcatgcgg acctgcacta tgaaggttct tgcgccattg accaggattt tcttgacgca
     3421 gccggtattc tcgaaaacga agccattgat atctggaatg tcaccaacgg caagcgtttc
     3481 tccacttatg ccatcgcggc agaacgcggt tcgagaatta tttctgttaa cggtgcggcg
     3541 gcccactgcg ccagtgtcgg cgatattgtc atcatcgcca gcttcgttac catgccagat
     3601 gaagaagctc gcacctggcg acccaacgtc gcctattttg aaggcgacaa tgaaatgaaa
     3661 cgtaccgcga aagcgattcc ggtacaggtt gcttgattgt tatccctgcg gctggttact
     3721 caccagccgc gacatcgtct ccagcgaatc cgttcttaag atataaagtc gttttagtaa
     3781 caacggatta tcccccggtt ttactttgcc tttcatggtt gtcaccgcca ggtgaaatcc
     3841 ggcatcgttt gctgccttca cggctttgtc attaaatccg ccaaacggat acgaaagata
     3901 ccagacatgc ggattaaatt gcgccagagc gcggcgtgaa cgtgcaaaat caaacagaat
     3961 attgtgttca ctacggctcg gtaatatggg gcggcgataa ccatccaccc gatgcaaaaa
     4021 atgggtatgt gactggaaat caaaaacatc gcgaatttcg ttaagttcag aaacgctcat
     4081 aaattgcagc gattttgggt cccacttctg cgggtgacgt ttgatgcgcg aggtaacaat
     4141 aaacgccgtc gccttcatgc catattgttt caacacggga tacgcatagc ggctcaccga
     4201 tttgaggcca tcatcaaagg taatcaccac cgctcgcgca gggagattga tcttattctt
     4261 cacgtaacct tccagctgca ccatgctcag tgtcgcgtat cccctgtcgc gcagccaggc
     4321 catctggtta ttgaaagcgc gtactgaggt ggtcgtcgaa gtatggcgaa aacgggtgtt
     4381 ttcttcatcg cgcagaatat ggtgataggt tagcaccggc aggccattat cgggttgggc
     4441 atccagcgcg ctgatatagg ccagtcgatc gccaatacgg atctgatacc aggtttgatt
     4501 taacctgtct ttcagtttat gcaaaatcgg gtagcgcaaa ttgtccgcca gtaccccata
     4561 atggcgcact gcccgcactc ggcgcgttat agaccggcgt atctttccag gtaattaagt
     4621 tctgattact cagcggcttg ttgaggtcac ccaaaccgtc ttcaactttt tgtcgcccct
     4681 gaactggctc gagatgccct ttatcgataa accctttacc aaagccaaaa ttaaatgcgt
     4741 aataacttgc ggcagtgggc tccacggcaa tgatttgccc ggcccgaata ttccccacgg
     4801 tcaccatctt gtcgccaatt tgcgcccaga tcgcagcatt ttcgatggtt tgcatataac
     4861 gggcaggtaa cgcggcacta acgcttgcgg taaacagcat cagcaggatg aataacagct
     4921 tgtttataca tgaaaaaata accgagggtg aaacaacgct tgtattgtag caaaagcgcc
     4981 atcagaatcg cgggttaata ctcatacaaa ttatgtttga ggacaaaagg cggatttttt
     5041 tgttgttggt gccaaagact actcacctcc ggcgcaccca gttcgacaat acgctcgcga
     5101 aactctgaac tggtcatggt ttcacggcaa gccatcatct gttcaattaa cggtaacgtg
     5161 acaccagaaa tcacttcaca acgggagtgt ttatggctta ataatgaagc cacgcggtac
     5221 ggtggcgctc cggctatatc ggttaagaag atgacaccct caccagagtc cgcttcatgc
     5281 agagcatcgc acatcatgcg gctgagcata ttagagctta atccgcgcca gaaattcacg
     5341 gcccggcact gaagaagtgc cccatgtttt ttctccagcg catccagtat ctcttgcgcc
     5401 cggtcatcgt gacaggtaat tacccaacct aacatcgcct tcctccttag ccgaaaatca
     5461 gtctatcctg accattgttg ataaagggtg atagccgtca aaactcctct cccccgaatc
     5521 cagaggagag gaaatagcct tagctacgca aaccacgtcc acgttggatc agcgaccaac
     5581 agatcaaata aaacaccaca ataaagacca ccagtacgcc aaaggtagtg gccagcggca
     5641 catcatttat accgaggaag ccgtagcgga aaccactgat catataaacg attgggttca
     5701 ggtgcgacag cccttgccag aacggcggca acaaagtcag ggagtaaaac accccgccca
     5761 aatacgtgag tggcgttaac acaaaggttg gcaccaggct gatgtcatcg aacgttttgg
     5821 caaacacgcc gttcagcaaa cccgcaaggg agaatagcac cgccgtgagc accagggtta
     5881 aggcaacgaa tacccacgaa tgcacctgaa acggcacaaa aaacagtgaa attgccgtca
     5941 ccagaatgcc aacaaacaga ccacgcgcca cgccaccgcc gacatatccg gcaataatga
     6001 cgtgagtcgg aaccggcgct accagcagct cttcaatatt acgctggaac ttggcaccaa
     6061 aaaatgatga cgcgacgtta gcgtaggcat tggtgatcac cgacatcatg atcagccccg
     6121 gtacgatgaa ctgcatatag ctgaagccat gcatatcgcc aatacgcgaa cctatcaggt
     6181 taccgaagat aataaagtaa agggtcatgg tgatgactgg cggcaccagc gtctgcaccc
     6241 agatacgcat aaagcgatgg atctctttcg cccagatgct ttttagcgcc acccagtaaa
     6301 gatgcatcat gcgcgatctc cttgtttttc attaaccagt gaaacaaaca gctcttccag
     6361 acggttagct ttgttacgca tacttaatac ctgaatgccc tgctcactta actgcgtaaa
     6421 tacgctgttg atcccctgct cacgcagcac ttcaacttcc agcgtcgcgg tatcgaccag
     6481 tcgatactga tagccatcga gcttcggtaa cgggcttttc ggtgcgagat cgagaataaa
     6541 ggtttccaat ttcagcttcg ccagcagcgc cttcatcgag gtattttcca ccagctcacc
     6601 gtgttgaata atgccgatat tgcggcacag catttctgct tcttccaggt agtgtgtagt
     6661 gagaatgatg gtggtgcctt tgtcgtttaa atccttcaaa aagccccaca ttgagcggcg
     6721 aagttcaata tccacgcctg cggtcggttc gtcgagaatc agtagtttag gttcatgcat
     6781 taacgcacgg gcaatcatta aacggcgctt catcccgcca gataacatac gcgcacgttc
     6841 gttgcgtttt ccccataaat cgagttgttt gagatatttt tcgctgcgga tgtacgcttc
     6901 tttgcgctcc acgccgtagt accctgcctg attcaccaca atttgctgca cggtttcaaa
     6961 cgggttgaag ttaaattcct gcggcaccag tcccaactga cgtttagcgt tcacgacatc
     7021 cttctcgaga tcgtaaccaa atacgctgac ccgcccggag gttttattta ccagagagct
     7081 gataataccg atagtggtcg atttcccggc cccgttcggc ccgagaagcg cataaaaatc
     7141 acccgcttcg acctgcaaat ctattccacg aagcgcctga acgccgcctg gataggtttt
     7201 tttaagctgt tgaagttcca gtgcaatggt cataaatttt tacttacctt acgttcttac
     7261 actttatctg tggtttaaat cgtcccggag ttaccctata ttagccaaac gtaattattt
     7321 ggttacaggt cgttaacctc catgaaagac atagatacac tcatcagcaa caatgcacta
     7381 tggtcaaaaa tgctggtgga agaggatccc gggttttttg agaaactggc acaagcgcaa
     7441 aaaccgcact ttctatggat tggatgttcc gacagtcgcg ttcctgcaga acgtttaacc
     7501 ggtcttgagc cgggcgaact ctttgttcac cgtaatgttg ctaacctggt cattcacacc
     7561 gacctgaact gcctttccgt ggttcagtat gcagtggatg tactagaagt tgaacacatt
     7621 attatctgtg gccactacgg ttgcggcggc gtacaagccg cagttgaaaa cccggaactg
     7681 gggcttatca acaactggct gctgcatatc cgcgatatct ggttcaaaca tagctcattg
     7741 ctcggcgaaa tgccgcaaga gcgccgtctg gataccttgt gtgaactgaa cgtcatggaa
     7801 caggtgtata acctaggcca ctccaccatt atgcaatcag cgtggaaacg cgggcagaaa
     7861 gttaccattc acggctgggc ctatggcatt cacgacggct tgctgcgtga tctggatgtt
     7921 actgccacca accgcgaaac ccttgagcaa cgttaccgtc acgggatttc caacctcaag
     7981 ctgaaacacg ccaaccacaa ataaaaatgc catgccggat gcaacacatc cggcaacttc
     8041 acacttactc gtccagcaga atcactttgc cgatatacgg cagatgacgg taacgctgtg
     8101 cgtaatcaat gccgtaaccc accacaaact catccgggat cgagaaaccg ataaattcta
     8161 ccgggacgtt cacttcacga cgggacggtt tatccagcag cgtacaaatc gccagcgact
     8221 tcggttcgcg caggcttaag atctcacgca ctttcgacag tgtattcccc gagtcgatga
     8281 tatcttcaac aatcagcacg tccttgccac ggatatcttc atccagatct ttgaggattt
     8341 tcacatcacg ggtggtggac atgccgctac cgtagctgga ggcggtcata aagtcgactt
     8401 catgagatac ctgaacttca cggcacaggt ccgccataaa cataaatgag ccacgcagca
     8461 gacccaccag caccatatcg ctgccgctgt ctttgtaacg ctcagtaatc tgacgaccca
     8521 gttcggcgat acgcgcttta atctccgctt cggggatcat tacttctaca gtatgtttca
     8581 tatctctaac catatgattt aaaaacaaat cacttcgcac gggcaggttt tggcaccgca
     8641 acaaagcgca agacacgcag tataccagta aaactattca ttcgcggaat ctgttaataa
     8701 agctcgaatt gtgatgacga tcacacatgt taaaacctat aattaattgc tactaaaata
     8761 ttaatgaatt gaaatggtgt ctctttatgg caattaacaa tacaggctcg cgacgattac
     8821 tcgtcacgct aacagtcctt tttgcagcgc tttgcgggct gtatctactc attggcggag
     8881 gctggctggt cgcgattggc ggctcctggt actaccctat cgctggcctt gtgatgctcg
     8941 gcgtcgcctg gatgctgtgg cgcagtaaac gtgccgcgct ttggctatac gccgccctgc
     9001 tgctcggcac catgatttgg ggcgtctggg aagttggttt cgacttctgg gcgctgactc
     9061 cgcgcagcga tattctggtc ttcttcggca tctggctgat cctgccgttt gtctggcgtc
     9121 gcctggtcat tcctgccagc ggcgcagttg ccgcactggt ggtggcactg ctgattagcg
     9181 gtagtatcct gacctgggcc ggatttaacg atccgcagga aatcaacggc accttaagcg
     9241 ccgatgccac acctacggaa gctatctcac ccgttgccga tcaggactgg cctgcctatg
     9301 gtcgcaatca ggaaggtcaa cgcttttcac ctctgaaaca aattaacgcc gataacgtcc
     9361 ataatctgaa agaagcctgg gtgttccgta ctggcgatgt gaagcagccg aacgatccgg
     9421 gcgaaatcac caatgaagtg acgccgatta aagtgggcga caccctttac ctgtgtaccg
     9481 ctcaccagcg cctgtttgcg ctcgatgccg ccagcggcaa agagaaatgg cattacgatc
     9541 ctaagctgaa aactaacgag tctttccagc acgtaacctg ccgtggcatc tcttatcatg
     9601 aagccaaagc agaaacggct tcgccggaag tgatggcgga ttgcccgcgt cgtatcattc
     9661 ttccggtcaa tgatggtcga ctgattgcga ttaacgctga aaacggcaaa ctgtgcgaaa
     9721 ccttcgccaa taaaggcgtg ctcaatctgc aaagcaatat gccagacacc aaaccgggtc
     9781 tgtatgaacc gacttcgcca ccgattatca ccgataaaac catcgtgatg gcaggttcag
     9841 ttaccgataa cttctcaacc cgcgaaacgt ctggcgtgat ccgtggtttt gatgtcaaca
     9901 ccggggagct gctgtgggct tttgatcccg gcgcgaaaga tccgaacgca atcccgtctg
     9961 acgaacacac ctttaccttt aactcgccaa actcctgggc accagcggcc tatgacgcga
    10021 agctggatct ggtctatctg ccgatgggcg tgaccacgcc ggatatctgg ggcggtaacc
    10081 gcacaccgga acaggaacgt tatgccagct cgattctggc gctgaatgcc actaccggga
    10141 aactggcgtg gagctaccag accgttcacc acgacctgtg ggacatggat cttccggcac
    10201 agccgacgct ggcggacatc accgttaatg gtcagaaagt gccagttatt tacgctccgg
    10261 cgaaaaccgg caacattttt gtgctcgatc gtcgcaatgg cgaactggtg gttccggccc
    10321 cggaaaaacc ggtgccgcaa ggtgctgcga aaggcgatta cgttactccg acccagccgt
    10381 tctctgaact gagcttccgt ccgaagaaag atttgagcgg tgcggatatg tggggagcca
    10441 ccatgtttga ccaactggtg tgccgcgtga tgttccacca gatgcgctat gaaggcattt
    10501 tcacgccgcc atctgaacag ggcacgctgg tcttcccggg taacctggga atgtttgaat
    10561 ggggcgggat ttccgttgat ccaaatcgtg aagtggcaat tgccaaccca atggcactgc
    10621 cgtttgtttc gaaactgatc ccacgcggtc cgggtaaccc gatggagcag ccgaaagatg
    10681 ccaaaggcac gggtacggaa tccggcattc agccacagta cggtgtaccg tatggtgtca
    10741 cgctcaaccc gttcctctca ccgtttggtc tgccgtgtaa acagccagca tggggttata
    10801 tctcggcgct ggatctgaaa accaatgaag tggtgtggaa gaaacgtatt ggtacgccgc
    10861 aggacagtat gccgttcccg atgcctgtac cggtgccgtt caatatgggt atgccgatgc
    10921 tgggcgggcc aatctccacg gcgggtaacg tgctgtttat cgccgctacg gcagataact
    10981 acctgcgcgc ttacaacatg agcaacggtg aaaaactgtg gcagggtcgt ttaccagcgg
    11041 gtggtcaggc gacgccaatg acctatgaag tgaatggtaa gcagtatgtg gtgatctccg
    11101 caggcggtca cggttcattt ggtacgaaga tgggcgacta tattgtggct tatgccctgc
    11161 cggatgatgt gaaataacca taatgcccgg agagatccgg gcatatttcc gaatacggtc
    11221 tttttatacc gtaaacccta acatcatccc cgtatcttca tgctccagca gatggcagtg
    11281 cgccatataa gcatgttctt tcggtgcgtc gtgattaaac ttcaccagca cttcactgac
    11341 attgccttct accttaacgg tatctttcca gcccgcgcga tgagccgctg gcggtttgcc
    11401 attttctgac aagatacgga actgcgtgcc gtgaatatgg aacggatgca gcatcatgtc
    11461 gcccacgcca gagataaccc aacgttcgta ctgccctttc gccgccgcaa acatcggctt
    11521 attcatatca aacgcctgac cgttgatttt attggcatgg tggaaatcga acttcccgcc
    11581 gtggttcata tgattcatat taccgtgccc catatggccc atcatctggc tgtgatccat
    11641 tccggccatc gcctgatcgc catatttctc cattagcatc tgcataccca tcatatcgag
    11701 catcgggtcc atagaaagtt gcagcttgcg taccgtcagc ccttccagcg aaggtaacgc
    11761 aggcaggcta cttaatgtgt ctggcaaagc accggaggca ctaatagcaa tcggctgaat
    11821 ccgcattacc ggatgcggct tgtcaaacgg cgcaatcgcc atccccatct ggctgaccgg
    11881 tagcgtcacc aggtcaaagg gtttgttgtc gttaacctcc accagcactt caaaacgctc
    11941 gcccatcagc accggcagct cgctcacctt caccggttca ggtagcagac caccgtcgct
    12001 ggcaatcaca tacagcgggc gattgtcgct ggtggcgaaa ttgagcgagc gggcattaca
    12061 gccattgagc aaacgcaggc gcagccaacc acgcggggca gcgtgttgtg ggtagattgc
    12121 accgttggtc agcagcgtat cgccaaacca gcccacggcg gcggtcatca catccagttg
    12181 ataatcaatc tgcccatcag cgttaaattt tttatcctga acaatcaccg gaacatcatc
    12241 gataccccac tgttttggca gcattaattt caggatctcg tcatcttcaa ttaccaccag
    12301 cccagccaac cccatcgcca cctgtcgccc agtcttgcca tgttgatgtg gatggaacca
    12361 gcaagtagcg gcaggttgat caacgttcaa cgtcaccgag cgcttgccac ctggcggaat
    12421 aattccctgc gggccgccgt cgacttcacc cggtacttcc agcccgtgcc agtgcaacgt
    12481 cgtctcttcc gtcagttggt tatagatatc aaccgttacc gctttgccgc gctgtaattt
    12541 caccgccggc cccagcagat tgccgttata gccccaggta gttgcagttt tctcgccaaa
    12601 ggtagactga cctgcgccaa tagttaactg aatgcgatta cgggcatcgg tcgtgagcaa
    12661 atcagggatc ggtaacgttg ggcgttccgc cgcaaagact gcgcggctcc acagcggcaa
    12721 ggctgaagcc acacccagcg cgacggaata ttttaagaaa tcacgacgtt gcatagttat
    12781 ttccttattc ttaagcaggc gaaacaaaat caaacgttga gcatagtcct tccccttacg
    12841 ggaaggtcaa gccgcagaca caatttaatc gacaataatg gtcgtcgcct cgctcgcagt
    12901 gtgctaacgt ttatcttctt taagcccctg gtagaagcaa tgaagacgtt tttcagaaca
    12961 gtgttattcg gcagcctgat ggccgtttgc gcaaacagtt acgcgctcag cgagtctgaa
    13021 gccgaagata tggccgattt aacggcagtt tttgtctttc tgaagaacga ttgtggttac
    13081 cagaacttac ctaacgggca aattcgtcgc gcactggtct ttttcgccca gcaaaaccag
    13141 tgggatctca gtaattacga caccttcgac atgaaagccc tcggtgaaga cagctaccgc
    13201 gatctcagcg gcattggcat tcccgtcgct aaaaagtgca aagccttggc ccgcgattcc
    13261 ttaagcctgc ttgcctacgt caaataatcc ctgatacctt tttgtagaaa tattgaccgt
    13321 gcatccgcgg tcaatgttag ctattatgtt gcgccctttt ttacgggtgt taacaaagga
    13381 ggtatcaacc catggccgaa aaaaaacagt ggcatgaaac gctacacgac cagtttgggc
    13441 agtactttgc ggtagataac gttctgtatc atgaaaagac cgatcaccaa gatctgatca
    13501 tttttgagaa cgctgcattt ggtcgcgtaa tggcgctgga tggcgtagta caaaccaccg
    13561 agcgcgacga gtttatctat catgagatga tgacccatgt tccgctactg gcccacggtc
    13621 acgcgaaaca tgtgctgatt atcggcggcg gcgacggtgc catgctgcgt gaagtaaccc
    13681 gacataaaaa cgttgagtca atcacgatgg tagaaatcga tgcgggtgtc gtgtcgttct
    13741 gccgtcagta tctgcccaac cataacgccg gtagctacga cgatccgcgc tttaagctgg
    13801 tgatcgacga tggcgtcaat ttcgttaatc aaaccagcca gacctttgat gtcattatct
    13861 ccgactgcac cgatcctatc ggtcccggcg aaagtctgtt cacctcagca ttttatgaag
    13921 gctgcaaacg ttgcctgaat cctagcggta tcttcgtcgc acaaaacggc gtctgctttt
    13981 tacagcagga agaagccatc gacagccatc gcaaactcag ccattacttc agcgacgttg
    14041 gcttttatca ggcggcgatc ccgacctatt acggcggtat catgactttt gcatgggcga
    14101 cagataacga cgccttacgc catctctcaa ccgaaattat tcaggcgcgt tttctcgctt
    14161 ctggcctgaa atgccgttat tacaatccgg caatccatac ggcagctttt gccttacctc
    14221 agtatctgca agatgcactg gcttcacagc cgtcctaagg agaagataag aaattgaaaa
    14281 aactgaaact gcatggcttt aataatctga ccaaaagtct gagtttttgt atttacgata
    14341 tctgctacgc caaaactgcc gaagagcgcg acggttatat tgcttatatc gatgaactct
    14401 ataatgccaa ccgtctgacc gaaatcctgt cagaaacctg ttccattatc ggggccaata
    14461 ttcttaacat cgcccgccag gattacgaac cacagggtgc cagcgtcact attctggtga
    14521 gtgaagaacc ggttgacccg aaactcatcg acaaaacaga acaccccggc ccactgccag
    14581 aaacggtcgt tgcccatctc gataaaagtc atatttgcgt acatacctac ccggaaagcc
    14641 atcctgaagg tggtttatgt accttccgcg ccgatattga agtctctacc tgcggcgtga
    14701 tttctccgct gaaggcgctg aattacctga tccaccagct tgagtccgat atcgtaacca
    14761 ttgattatcg cgtgcgcggt tttacccgcg acattaacgg tatgaagcac tttatcgacc
    14821 atgagattaa ttcgattcag aactttatgt ctgacgatat gaaggcgctg tatgacatgg
    14881 tggatgtaaa cgtctatcag gaaaatatct tccataccaa gatgttgctt aaagagttcg
    14941 accttaagca ctacatgttc cacaccaaac cggaagattt aaccgacagc gagcgccagg
    15001 aaattaccgc tgcgctgtgg aaagaaatgc gcgagattta ttacgggcgc aatatgccag
    15061 ctgtttaacg gctctggcgg agctccaggc tccgccagat ttatttactt ctgctgcacg
    15121 aaattgcggt aagccgccac gacctgcaga aaatcctcaa cgccgcatag cgacaggctt
    15181 tcttcgtcgt agtagttcat cccctcttcc atttcatcgc cagcgaattc cagttgattg
    15241 gcgcgaacca tcacctcttc accgtccatc cacagggtgt attcatgccc tgcccgttgc
    15301 caggaccgtt cgctaccttt cagtgcgtgc gctgcttgtt ccacttcatc aagcaaggcc
    15361 aggttttctt tcacctcttc attaaaccag tgcccgacca cttcatgccc catggacata
    15421 cgcaccttta ccactccggt aatatcgcgc agaaattcgt aatccatagt gtgttcctct
    15481 gctcccggca atgcgccgaa atcgcattgc gccattgatg taattatcgc agccttaccg
    15541 gagaaaaaca gcggaacggc gatggtttag aaataaaaaa tgcccgggaa tctcattcac
    15601 cgggcattgt gtcgtttatg cgcagcgcgt gcgcttactt attacaccgc agtctggaaa
    15661 atcaccccat cggctttttc ggtgtactga gaaagttggt tgaagttcag ataacgataa
    15721 gtatcaacgg cagttttatc tacttgcgca acgtaggtct ggtactcttc cggcgtcggc
    15781 agtttgccaa tcagcgccgc aacagccgcc agttctgcag aagccaggaa gacattcgcg
    15841 ccagtcccca gacggttcgg gaagttacgg gtagaggtgg aaaccaccgt cgcaccgtct
    15901 gctacacgcg cctggttacc catacacaga gaacagcccg ggatctcgat acgagccccg
    15961 ctcttaccga agacgctgta gtagccttct tcagtcaact gtgcggcgtc catacgggtt
    16021 ggcggtgcca cccacaggcg ggtcggcaac tggcctttat gcgcatccag cagtttaccc
    16081 gcagcacgga agtgaccgat gttagtcatg caagaaccga taaatacttc gtcgatcttc
    16141 tcgccctgta ccgcagacag cggacgcgcg tcatccgggt cgttcggagc acacaggatt
    16201 ggctctttaa tatccgccag atcgatgtca atcactgccg cgtattccgc atctgcatct
    16261 gcttccagca gctcaggatt cgccagccat ttttccatgc cctgaatacg acgttccagg
    16321 gtacgacgat cgccgtaacc ttccgcgatc atccacttca gcaggacgat attagagtta
    16381 aggtattcga tgattggttc tttgttcagc ttgatagtac aaccagcggc agaacgctca
    16441 gcggacgcat cggtaagctc aaaggcctgc tcaactttca gatccggcag accttcaatt
    16501 tccagaatgc ggccagagaa gatgtttttc ttgcctttct tctcaacggt cagcagacct
    16561 tgtttgatgg catacagcgg aatggcgtgt accagatcgc gcagggtgat gcccggctgc
    16621 attttgcctt tgaagcgcac cagaacggat tccggcatat ccagcggcat tacgcctgtt
    16681 gcggctgcaa atgccaccag accagaaccc gccgggaaag agataccgat cgggaaacgg
    16741 gtatgggagt cacctccggt accgacggta tccggcagca gcatacggtt cagccaggag
    16801 tggattacgc cgtcacccgg acgcagcgac acaccgccac ggttcataat gaagtccggc
    16861 agcgtgtggt gcgtgttcac gtcaactggc ttcggatacg ccgcggtgtg gcagaaagac
    16921 tgcatcacca ggtcagccga gaagcccagg cacgccaggt ctttcagttc atcacgggtc
    16981 atcgggccgg tagtgtcctg tgaacctaca gaagtcattt tcggttcgca gtacgcgccc
    17041 ggacgaatgc ctttcacgcc acaggcacgg cctaccattt tctgcgccag cgagaagccg
    17101 cgatcgctct cagcgacatc tttcgcctga cggaacacat cactgtgcgg cagaccaagt
    17161 gcttcacgcg ctttggtggt caggccacgc ccgataatca gcgggatacg gccgccagca
    17221 cgcacttcat caatcagcac gtcggttttc agttcgaagg tcgccagcag ttcgcctgtt
    17281 tcgtggttac gcacttcacc tttgtacggg taaacgtcaa tcacgtcgcc catgttcagg
    17341 ttagagacgt cgacttcgat tggcagtgca cccgcgtctt ccatcgtgtt aaagaagatg
    17401 ggtgcaattt taccgccgag gcacaaacca ccgccgcgtt tgttcggcac atgtggaata
    17461 tcatcgccca taaaccacag aacggagttc gtggcggatt tacgcgatga acccgtaccc
    17521 acaacgtcac cgacgtacgc cagcgggaaa cctttctgtt gcagagcttc aatctgtttg
    17581 atcgggccaa caacacctgg ctggtctggc tcaatacctt cacgggcgtt tttcagcatc
    17641 gccagcgcgt gcagtgggat atccgggcgc gaccacgcat ccggtgccgg agaaaggtca
    17701 tcggtgttgg tttcgccagt gactttgaag acggtaacgg tcagtttttc agccagcgcc
    17761 gggcgattca gaaaccattc ggcatccgcc caggactgca ttacctgctt cgcatattcg
    17821 ttgcctgctt tcgctttctc ttctacgtca tagaagttat cgaacatcag cagtgtgtga
    17881 gaaagtgctt tggcagcgat cggtgccagt ttggcatcat ccagcgcgtc gatcagcgga
    17941 tgaatgttgt aaccaccctg catggtgccc agcagttcga tggctttttc cggagtcagc
    18001 agaggggatt tggcttcgcc tttcgcgata gcagccagga agcctgcttt gacataggcg
    18061 gcttcatcga cgccaggggg aacacggttg gttaacagat ctaacaggaa ttcttcttcg
    18121 cccgcgggcg ggtttttcag cagctctaca agtgcggcca tttggtttgc atccaggggt
    18181 ttgggcgcaa tcccctcagc ggcacgctca gctacgtgct tacggtattc ttctagcacg
    18241 acggttctcc tcgctctcat tgtcatagtg cggcaggcga ttctcttcac gctcctgtga
    18301 gacagcagtt tgtagggtaa atgcccagta ccgcaacggg cagaatagca ggattttgac
    18361 gacgtgttaa tctgtttaca aaaaagcaac ataaaaaagt ggctgaatcg ttaaggatgg
    18421 tctagagatt gtttccctcc gtaaaaactt cgttaattcg catggtgata atcacctttc
    18481 tcaacgaatc ccaagattag tcaaaattta aactaccgcc tctttatact cggattaaca
    18541 gcacctgcgg gtggcagttc gccgaccatt gcgatttcct tgagatccga attatgaaaa
    18601 tgactttgcc gtttaaaccc catgtgctgg cactaatttg cagtgccggg ctttgtgccg
    18661 cctctgccgg gctatatata aaaagccgca cagtggaagc ggctgtggaa acgcaatcga
    18721 cacaactggc tgtgtctgac gctgccgcgg ttacgcttcc tgcaacggtt tccgcgcctc
    18781 ccgtaacacc cgccgtcgtt aaatccgcat tcagcactgc acaaatagat caatgggtcg
    18841 cgcccgtcgc gctgtatccc gacgccctac tttcgcaggt gctgatggca tcaacctatc
    18901 cggcaaacgt tgctcaagca gtgcaatggt cgcacgataa tccacttaaa caaggcgatg
    18961 ctgctattca ggcggtatct gaccagccgt gggacgccag cgttaaatca ctggtggcct
    19021 ttccacaatt gatggcattg atgggcgaaa acccgcaatg ggtgcaaaac ctgggcgatg
    19081 cttttctggc gcagccgcag gacgtgatgg actcggtaca gcgattgcgg caactggcgc
    19141 aacaaaccgg ttcgctgaag tcatcaaacg aacaaaaagt tattaccaca acgaagaaag
    19201 ctgtaccggt aaaacagaca gtcacggcac ccgtcatacc atccaatacc gttttaactg
    19261 ccagccccgt cattacagag cctgcaacaa ccgtcatttc cattgagccc gccaatcctg
    19321 atgtggtcta tattcccaac tacaacccaa ccgtggttta cgggaactgg gccaatactg
    19381 cgtatccgcc ggtttatctg ccaccaccag ccggagaacc gtttattgac agctttgtgc
    19441 gcggattcgg ctatagcatg ggtgttgcta ccacgtacgc actattcagc agcatcgact
    19501 gggatgacga cgatcatgac catcatcatc atgacgatga tgattatcat caccacgatg
    19561 gcggtcatcg tgacggtaat ggctggcaac acaacggcga caacatcaat atcgacgtca
    19621 acaatttcaa ccgtatcacc ggtgagcatc ttactgataa gaatatggca tggcggcaca
    19681 atccaaacta ccgtaatggt gtgccctatc atgatcagga tatggcaaag cggtttcatc
    19741 aaaccgatgt caacggcgga atgagtgcca cgcagctacc tgctccaaca cgcgacagcc
    19801 agcgtcaggc ggcagcaagt cagtttcagc aacgaacaca cgccgccccc gtcattacac
    19861 gagataccca acgtcaggca gcggcacagc ggtttaatga agctgaacac tatgggagct
    19921 atgacgactt ccgcgacttc agccgtcgcc aacccctgac ccagcaacaa aaggacgccg
    19981 ctcgtcagcg ttatcagtca gcttctcctg agcagcgcca ggcagttcgc gagagaatgc
    20041 agactaaccc gcagatccag cagcgaagag aggcagcgcg tgagcgcatt cagcccgcct
    20101 cgcctgagca gcgccaggca gtccgcgaga aaatgcagac taacccacag atccagcagc
    20161 gaagagacgc agcgcgtgag cgtattcagt cagcctcgcc tgagcagcgc caggtgttta
    20221 aggaaaaagt acagcagcgc ccactgaacc aacagcaacg tgataacgcc cgccagcgtg
    20281 ttcaatcagc atcacctgaa caacgtcagg tttttcggga gagagttcag gagagccgcc
    20341 cacaacgtct aaacgacagt aaccgtactg ccagattgaa taacgatcaa cggtcagcag
    20401 tacgcgaacg tctctctgag cgcggagcaa ggcgactgga aaggtaaatt acagacgtaa
    20461 aaaaagcggc gtggttagcc gcttttttaa ttgccggatg ttccggcaaa cgaaaaatta
    20521 cttcttcttc gctttcgggt tcggcaggtc ggtaatgcta ccttcgaaca cttctgccgc
    20581 caggcccaca gactcgtgca gagtcgggtg cgcatggatg gtcagcgcga tgtcttcagc
    20641 gtcacaaccc atttcgattg ccaggccgat ttcacccagc agctcgccgc cgttggtacc
    20701 gacaatcgca ccaccgatca cacggtgaga ttctttgtcg aaaatcagct tggtcatacc
    20761 gtctgcgcag tcggaagcga tagcacgacc agaagcagcc cacgggaagg tggcggtttc
    20821 atagctgatg cctttctctt tcgcttcttt ctcagtcaga cctacccatg caacttctgg
    20881 ttcggtatag gcgatagacg ggataacttt cggatcgaag tagtgttttt taccggcgat
    20941 aacttcagcg gcaacgtgac cttcgtgaac acctttgtgt gccagcatcg gctgaccaac
    21001 gatatcgccg atagcaaaga tgtgcggtac gttggtacgc agctgtttgt caacgcggat
    21061 gaaaccacgg tcgtccactt ccacgccagc tttgcctgcg tcgaggtttt taccgttcgg
    21121 cacacgacca atcgctacca gcacggcgtc gtaacgctgc ggttcagcgg gtgctttttt
    21181 gccttccatc gtcacataaa taccgtcttc tttcgcttca acggcggtaa ctttggtttc
    21241 cagcatcagg ttgaatttct tgctgatacg cttggtgaag actttaacga tgtctttgtc
    21301 agctgccggg ataacctggt cgaacatttc aaccacgtca atctgtgaac ccagcgcgtg
    21361 gtatacggtg cccatttcca gaccgatgat accgccaccc attaccagca ggcgttctgg
    21421 tacttctttc agttccagcg cgtcagtgga gtcccagata cgcggatctt catgcggaat
    21481 aaacggcagt tggatcgggc gagaacccgc tgcaatgatc gcgttgtcga agttgatcac
    21541 ggttttaccg ttctcacctt caacttccag ggtgttagcc ccggtaaatt tacccagacc
    21601 gttgaccact ttgactttgc ggcctttcgc cataccagcc agaccaccgg tcagctgatt
    21661 gatcactttc tctttccagg tacgaatctt gtcaatatcg gttttcggtt cgccgaagac
    21721 gataccgtgt tcagccagcg ctttggcttc ttcgataact tttgctacgt gcagcagtgc
    21781 tttagaaggg atacagccga cgttcaggca aacaccgcca agggtgttgt aacgttctac
    21841 gattacggtt tccagaccta aatcagcgca acggaaggca gcggagtaac ctgcggggcc
    21901 tgccccaagt accacgacct gagttttgat ttcagtactc atcatgacct ctatatattt
    21961 atctccggcg gtcatacccg tcgtctttca ggccgcagcg gcgttagctt cacgccctca
    22021 ccccagtcac ttacttatgt aagcccctgg ggattctggc gcttgctacc ttgctgcacc
    22081 cagaaatcca tagggtatgt gaagtaatac cctaaccacc accgggtcgt tctatccgtc
    22141 ggtattttac aaaattgtta acaattttta aacaacaaac ggcaaccgat ttgtctattc
    22201 gctaataacc tcaatacatt catgagatta ccagaaaaaa gccggccgtt gggccggctc
    22261 ttttacttac atcaccagac ggcgaatgtc agacagcgtg ttgttaatga tggtaatgaa
    22321 acgggcacca tcagcaccgt cgatcacgcg gtggtcgaag gagagagaaa tcggcagcat
    22381 cagacgcggc acgaactctt taccattcca caccggctcc atcgcggact tggaaacgcc
    22441 gaggatagcc acttccggcg cgttcacaat cggcgcgaag tgggtagtac ccaggccgcc
    22501 gatgctggag atggtgaagc aaccgccctg catttcgccc gcagtcagct taccgtcacg
    22561 cgctttctta gaaatagtca tcagctcgcg agacagctcg atgatgcctt tcttgttgac
    22621 gtctttgaat accggaacaa ccagaccgtt cggggtatcc accgccacac cgatgttgat
    22681 gtatttcttc agggtcagac gctgaccgtc ttccgacagc gaactattga agcgaggcat
    22741 ctgctcaaga gctgcagcaa cggctttcat gatgaagaca accggggtga tcttcacatc
    22801 cagcttacgt ttcgccgctt cttcgttctg ctgtttacgg aacgcttcca gctcggtgat
    22861 atcggttttg tcgaagtggg taacatgcgg gatcatcacc cagttacggc tcaggttagc
    22921 accagaaatt ttctggatac ggcccagttc cacttcttcg atttcaccaa acttgctgaa
    22981 gtccaccttc ggccacggca gcatgcctgg gataccgccg ccagtcgccg ccggagctgc
    23041 ttctgcacgt ttgatagctt ctttcacgta agcctgaacg tcttcgcgca ggatacgacc
    23101 tttacggcca gtgcccttca ctttcgccag gttaacacca aactcgcgtg ccagacggcg
    23161 gatcagcgga gtcgcgtgaa cataagcgtc gttttcagca aattcagatt tgccttccgc
    23221 tttcgcagct ggtgctgctg ccggggcttc agcttttgct gccggtgccg gcgctgccgc
    23281 ttcctgtttc gcaggagctg ccgcaggcgc tgcgccttca acttcgaaga tcataatcag
    23341 cgagccagtt ttcactttat cgccaacgtt gactttcagt tccttcacga cgcctgcaaa
    23401 cggcgccgga acttccatag aagctttgtc gccttctacg gtgatcagtg actgttcagc
    23461 ggcaactttg tcgcccactt tcaccatcac ttcagtcact tcaacttcgt caccgccgat
    23521 atccggaacg ttaacttctt tcacgccagc tgctggtgca ggggccgctg ccggagccgc
    23581 ttcctgttta gccgccggag ctgccgcgcc tgcttcaccc gcgacttcga agaccataat
    23641 cagcgagccg gtagacactt tgtcacccac gttcactttg atctctttca cggtgccagc
    23701 aaacggagcc ggaacttcca tagaagcttt atcgccttct acggtgatca gcgactgttc
    23761 agcttcaact ttatcgccaa ctttcaccag gatttcggtc acttcaactt cgtcgctgcc
    23821 gatatccgga acgttaacgt cttttgccgc cgcagccgcg ggtgctgctg ccggagctgc
    23881 ttctttcttc tcttctgcct gagcaggtgc agcgtctgct gcaccgtcgg cggaatcgaa
    23941 aatcataatc agtgcgccgg tctgggtttt atcgccaaca gagactttga tctctttaac
    24001 gatacccgcc tgcggagacg gaacttccat agaggctttg tcgccttcta cggtgatcag
    24061 cgactgttcg gcttcaactt tgtcgcccac tttgaccagg atctcggtga tttcaacttc
    24121 atcagccccg atgtccggta ctttgatttc gatagccatt attcttttac ctcttacgcc
    24181 agacgcgggt taactttatc tgcatcgatg ttgaatttgg cgattgcgtc agcaaccact
    24241 ttcttatcga tttcgccacg tttagccagt tcgcccagcg ccgcaaccac gacataagaa
    24301 gcatcaactt cgaagtggtg acgcaggttc tcacggctgt cggaacgacc gaagccatca
    24361 gtacccagta cgcggtagtc gtcagccggt acgtaagtac ggacctgctc agcgaacagt
    24421 ttcatatagt cggtagatgc cactgccgga gcgtcgttca tcacctgagc gatatacgga
    24481 acgcgcggag tttccagcgg atgaagcatg ttccagcgtt cacaatcctg accatcacgc
    24541 gccagctcgg tgaaggaggt cacgctataa acgtcagaac ctacgccgta atctttcgcc
    24601 aggatctctg ccgcttcacg gacgtgacgc aggatagaac cggagcccag cagctgaact
    24661 ttacctttgc taccttcaat ggtttcgagt ttgtagatac ctttacggat accttcctca
    24721 gcaccttccg gcattgccgg catgtggtag ttttcgttca gcgtggtgat gtagtagtaa
    24781 acgttctctt gtttttcacc gtacatacgc tccagaccgt catgcataat gacagcaact
    24841 tcgtaagcgt aagccgggtc gtaagagata cagttcggaa tagtcagcga ctgaatgtgg
    24901 ctgtgaccat cttcatgctg cagaccttct ccgttcaggg tggtacgacc ggaagtaccg
    24961 ccgatcagga agccacgcgc ttgctggtcg ccagccgccc agcacagatc gccaatacgc
    25021 tggaagccga acatcgagta atagatgtag aacgggatca tcggcagatt gttggtgctg
    25081 taagaggtcg ccgctgccag ccaggaacaa cctgcgccca gctcgttgat cccttcctgc
    25141 agaatctgac ctttctcatc ttctttatag taagcaacct gctcgcggtc ctgcggggtg
    25201 tactgctgac cgttcgggct gtaaatacca atctgacgga acagaccttc cataccgaaa
    25261 gtacgcgctt cgtcggcgat gatcggtacc agacgatctt tgatcgactt gttcttcagc
    25321 attacgttca gggcacgaac gaaagcgata gtggtagaga tctctttgct ctgctcttcc
    25381 agcagcgcgc cgaagtcttg caggctcggc agctcaagct tctcggtgaa gttcggctga
    25441 cggcttggca gataaccgtg cagtttctga cgctgtgcgt gcagataggt atgctcttca
    25501 gaaccttccg ggaaggtgat gtacggcagt ttttcgatat ctgcatcaga caccggcaca
    25561 ttgaaacggt cgcggatgtg acgcacgccg tccatgttca ttttcttaac ctggtgcgcg
    25621 atgtttttac cttcagccgc gtcgcccatg ccgtaacctt taatggaatg agcaaggatt
    25681 actgtcgctt tgcctttggt ttcctgcgct ttcttgaatg cagcgtagat tttcttcgga
    25741 tcgtgaccac cacggttcag tgcccagatc tgctcgtcag tccagtctgc aaccagtgct
    25801 gcggtttcag gatatttacc gaagaagtgt tcacgaacgt acgcaccatc tttcgatttg
    25861 aaggtctggt agtcgccgtc aacggtttcg ttcatcagct ggatcagttt accgctggta
    25921 tctttacgca gcagttcatc ccaacggcta ccccacatca ctttgatcac gttccagcca
    25981 gcaccttcga agatgccttc cagttcgttg atgatcttgc cgttaccggt gaccgggccg
    26041 tcaagacgct gcaggttaca gttgataacg aagaccaggt tatccagttt ttcacgggta
    26101 gcgatggtga tcgcaccttt ggattccggt tcgtccattt caccgtcgcc gaggaacgcg
    26161 taaacggtct gtttagaggt atctttcagg ccacggtgtt ccagatattt caggaattta
    26221 gcctggtaaa tagcaccaat cggccccagc cccatagata cggtcgggaa ctgccagaat
    26281 tccggcatca gtttcgggtg cggataggaa gagaggccat tgccgtgaac ttcctgacgg
    26341 aagttatcca gctgctcctg agtcagacga ccttccagga aagcacgagc gtacacgccc
    26401 ggggagatgt ggccctggaa gtaaaccagg tcgccgccat cctgctcgtt gcgtgcacgg
    26461 aagaagtggt taaagcacac atcataaatg gttgcggaag actggaagga cgccatatgg
    26521 ccgcccagtt cgaggtcttt tttcgacgca cgcagcaccg tcatgatggc gttccagcgg
    26581 atagctgaac gaatacggcg ttccagttcc agattacccg gatactccgg ttgttcttca
    26641 acggggatgg tgttgatgta gttgctgata cctgtgcctg cggctacgtt tacaccgcct
    26701 ttgcgggctt cagcaagcag ttggtcgatc agatactgag cacgctcaac accttcttca
    26761 cggatgaccg attcgatcgc ctggagccag tcgcgagttt cgatcggatc cacgtcattt
    26821 gggaaacgtt ctgacatggg ttattcctta tctatctaat aacgttgagt tttctggaac
    26881 ctgtcccatt gaactctcgc cggaaagctc aataagacag gttctacgtt tagttgccgc
    26941 gcttttatat gcgcttgatt tacaacatct tctggataat ttttaccagt aaaatcacta
    27001 attctttcgt tgctccagac gacgcagaga acgctcacgg cggctctctt cacgacttct
    27061 gtcgagcaaa atttcttcga taaaggccag atggcgatgc gatgcttcgc gcgcttcttc
    27121 cggcttaccg gccataatcg cttcaaatat gcgggtgcgg tgactactca ccagcggcag
    27181 catctcgcga cgcgaataga gcaattcgaa gttctggcgg acattctggg ccaacatcgg
    27241 ctccatacac cttagcagat gaagcagaac cacattgtgg gccgcttcag tgacagcaat
    27301 ctgatactgg agtacggcgt ttgattccgc gtccagatcg ccagactgct gcgccagttc
    27361 tatggcgtga tggagttcac ggatgcgttc cttgtcttca tcggtactac gcagcgcggc
    27421 gtaataagcg gcgatacctt ccagggcgtg tcgtgtttcg agcaagtcat actgtgactc
    27481 aggatggtcg gagagcagct ccaccagcgg atcgctgaag ctttgccata ggctgctctg
    27541 gacaaaagtg ccgccaccct ggcgacgaag caacaagccc ttcgcttcga gacgttgaat
    27601 cgcctcacgc aaggagggac gggagacgtc aaactgtttt gccagttcgc gttccggtgg
    27661 gagtttttcg cccgggcgga gagtgccttc gaggatcaaa aactccagtt gctgctcaat
    27721 cacatcggag agttttggtt ggcggatttt gctgtaggcc atgagttcct gtcttaagcc
    27781 acttgccgaa gtcaattggt cttaccaatt tcatgtctgt gacgctaaag taacaaagta
    27841 ttcaccttat gtccatacag gttttgattg aaatcatgaa actgtgcaca ttttaacaac
    27901 ttgacatata taacgtttca aagttgtaac tatgcacaaa tgtagacttt acgtaggaaa
    27961 gggatttttt aacgattatt aaactataaa aatccgaatt gaaccgattc acttaccaat
    28021 tttgtgattt ttaattcaat taaaacgaat ttaaattcat tctacatatt gagaggggtt
    28081 gaggctgagc tttacaaacg gtttcttttt aagcaactca tcttcaacca tgcataaagc
    28141 gggtgcattc gctgccgcat accattattc ttgatctgac ggaagtcttt ttgtaacaat
    28201 tcaaacttct ttgatgtaaa caaattaata caacaaacgg aattgcaaac ttacacacgc
    28261 atcactgcgt agatcaaaaa aacaaccacc gcacgaggtt tcatgatgga aggtcaacag
    28321 cacggcgagc agctaaaacg cggccttaaa aaccgccata ttcagcttat cgcgctgggt
    28381 ggcgcgatag ggaccgggtt attcctgggt agcgcctccg taatacagtc cgcagggcca
    28441 gggattatcc tgggttacgc cattgctggt tttatcgcct ttctgatcat gcgtcagctg
    28501 ggtgaaatgg tggtcgaaga acctgtcgca ggctccttta gccactttgc ttataaatac
    28561 tggggcagtt ttgccggttt cgcctctggc tggaactact gggtactgta cgttttagtt
    28621 gccatggctg agctgactgc cgtgggtaaa tacattcagt tctggtatcc ggaaatcccc
    28681 acctgggttt ctgccgccgt attctttgtg gtgattaacg ccatcaacct gaccaacgtt
    28741 aaagtgtttg gcgagatgga gttctggttt gccattatca aagttatcgc tgtggtagcg
    28801 atgatcatct tcggcggctg gctgctattc agtggcaaca gcggcccgca ggcgaccgtt
    28861 agcaacctgt gggatcaggg tggtttcctg ccgcacggct tcaccgggct ggtgatgatg
    28921 atggcgatta tcatgttctc gttcggtggt ctggaactgg tggggatcac cgcagcagaa
    28981 gctgataacc cggagcaaag tataccgaaa gcaactaacc aggttatcta ccgcatcctg
    29041 attttctata ttggttcgtt agccgttctg ctctcactga tgccgtggac ccgcgttacc
    29101 gccgatacca gtccgtttgt gctgatcttc cacgagttag gcgatacctt tgtggcgaat
    29161 gcgctgaaca tcgtggtact gactgcggcg ctctccgtgt acaacagctg cgtatattgc
    29221 aacagccgta tgctgtttgg tctggcacaa cagggtaatg cgccaaaagc gctggcgtct
    29281 gtcgataaac gtggtgtacc agtaaatacc attctggtgt ctgcactggt aacggcgttg
    29341 tgcgtactga ttaactacct tgccccagag tccgctttcg gactgttaat ggcgctggtg
    29401 gtatctgcac tggtaatcaa ctgggcgatg attagcctgg cgcatatgaa attccgtcgc
    29461 gccaagcagg aacaaggcgt ggtaactcgc ttccctgctc tgctttatcc gctgggtaac
    29521 tggatctgcc tgctgtttat ggcggcggta ctggtgatta tgctgatgac cccaggaatg
    29581 gcgatttcgg tatacctgat cccggtatgg ctgatcgtgt taggtatcgg ctatctgttt
    29641 aaagagaaaa ccgccaaagc cgtaaaagcg cattaatctc tctacgccct cacccgtaca
    29701 gggtgagggc aataatcttt acaccaacgc cccgtaaatc gtcagtagtg caatcaccac
    29761 cacgaccacg aacgaggttt tcttcgccat tgaaaccgct gccttcggcg tctccacctt
    29821 atcgacatgc ggttcacgcg ccagagagaa ctgcgccaga cgcgttaaca cctgatactg
    29881 cgaagtatgg aagtcaccca gcgaagcaaa ccaggccggt aacgctttct ccccatgacc
    29941 gatcaaggca tataccacac ccgcaagacg aaccggcacc caatccagta catgaagcac
    30001 ggcatcaatg ccggactgta aacgatgatg cggcgtctgg tatcgcgcca gccagtattg
    30061 ccatgcacgc aaaaacgcat accccatcag cgtaacgggt ccccagattc cccccacaat
    30121 caaccagaac agcggagcaa gataaaaacg aaagttaatc cacagcaatg cattttgcag
    30181 ctcacgcaaa tactcacgtt catcgcagcc tgccgggacg ccgtgaatca tggtgagttc
    30241 gccagccatc gtgacacggg catggctatc attacgtgaa gcagctgtca gataagcatg
    30301 ataatgaaga cgaactttac ctgcgccaat acacagcaaa ccaatcagca gccacaccag
    30361 cagcgtggga acgttgaaca atactccctg caatgcgcgt aacagtaaaa aagtcacgcc
    30421 catcgcaata atggtcatgc ctaacgtgcg cccgagagaa aaatgtttca cccgccgaaa
    30481 gaacgcttca agacgatgat caagctgcca gtgctcgccc aacttaaaca ggcgctcgaa
    30541 aattaacacc agtaaggttg taaatagcgt catgttgtct ccttgctgac cagcgcacga
    30601 aaccgcgccc aatcaaatgc agggccggga tcggttttcc gatccggcgc aatatcacaa
    30661 tggcccgtca tgttattagc gatatctgga tagcgatcaa tcagtgcccg cgtaaccgcc
    30721 gcaagctgtt gatactgcgc atcggtatac gccagcgtat cggtgccttc aagctcaatc
    30781 ccaatagaaa aatcattgca gcgttcgcgc ccctgatact gagagactcc cgcatgccat
    30841 gcacgtttat cgaaaggaac atactggact atttcaccat cacggcgaat caaacagtga
    30901 gcggagacgc gcaaatgggc gatctcagca aagaaaggat gtgcctgcgg atcaatagtt
    30961 ccagtgaata atgcgtcgat ccacggaccg ccaaactcgc ctggcggcag gctaatattg
    31021 tgcaccacca gcagggtggg tgtttcgtca tccgggcggc aatcgtaatg tggtgaggga
    31081 acgcggcgcg cgccaaccag ccacccctgt tctaacaaca tgcaggatct ccttatatgt
    31141 ggtgctaata cccggttcag agtagcatgt ttctacctta tgattcgtta gctatctgga
    31201 gttttaacat gccgcctcgc cgctataacc ctgacacccg acgtgacgag ctgctggaac
    31261 gcattaatct cgatatcccc ggcgcggtgg cccaggcgct gcgggaagat ttaggcggaa
    31321 cagtcgatgc caacaatgac attacggcaa aacttttacc ggaaaactct cgctctcatg
    31381 ccacggtgat cacccgcgag aatggcgtat tttgcggcaa acgctgggtt gaagaggtgt
    31441 ttattcaact ggcaggcgac gatgtcacca taatctggca tgtggatgac ggcgatgtca
    31501 tcaacgccaa tcaacccttg ttcgaacttg aaggcccatc ccgcgtgctg ttaacgggcg
    31561 aacgcactgc gcttaatttt gtgcaaaccc tttcaggagt tgccagtaag gtacgccact
    31621 atgtcgaatt actggaaggc accaacacgc agttgttgga tacgcgcaaa accttacctg
    31681 gcctgcgttc agctctgaaa tacgcggtac tttgcggcgg cggagcgaat caccgtctgg
    31741 ggctttctga tgccttcctg atcaaagaaa atcatattat tgcctccggc tcagtgcgcc
    31801 aggccgtcga aaaagcgtcc tggctgcacc cggatgcgcc agtagaagtc gaagtagaga
    31861 atctggaaga acttgatgaa gccctgaaag caggagccga tatcatcatg ctggataact
    31921 tcgaaacaga acagatgcgc gaagccgtca aacgcaccaa cggcaaggcg ctactggaag
    31981 tgtctggcaa cgtcactgac aaaacactgc gcgaatttgc cgaaacgggc gtggacttta
    32041 tctccgtcgg tgcgctaact aaacacgtac aagcactcga cctttcaatg cgttttcgct
    32101 aattgctgac agatttatcc gctccatcgc gggcggataa tctccccttc cccaactttc
    32161 ttcgtaacgc ctcgcaaatt tcttgtcttt cgctgcaacg aaataaaaaa cctcggaagc
    32221 tgctttcccg tttcgttttt tgcccctcgc ttgtgctgat ggcgtttgcc aaagtagcgc
    32281 caaccaaatc aaggagcgaa acagatggac aagcaacgcg gttttacact tatcgaactg
    32341 atggtggtta ttggcatcat tgccatttta agcgccattg gtattcccgc ttatcaaaac
    32401 tacctgcgca aagctgcact caccgacatg ctacaaacct ttgtgcctta ccgtaccgcc
    32461 gtagagttgt gcgcgctgga acatggtg
//
LOCUS       DADMJE010000031        31371 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.032, whole genome shotgun sequence.
ACCESSION   DADMJE010000031 DADMJE010000000
VERSION     DADMJE010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 31371)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31371)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31371
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.032"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(15..3296)
                     /locus_tag="JN001_001281"
     CDS             complement(15..3296)
                     /locus_tag="JN001_001281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417044.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5107 domain-containing protein"
                     /protein_id="HAY9052573.1"
                     /translation="MTPVKVWQERVEIPTYETGPQDIHPMFLENRVYQGSSGAVYPYG
                     VTDTLSEQKTLKSWQAVWLENDYIKVMILPELGGRVHRAWDKVKQRDFVYHNEVIKPA
                     LVGLLGPWISGGIEFNWPQHHRPTTFMPVDFTLEAHEDGAQTVWVGETEPMHGLQVMT
                     GFTLRPDRAALEIASRVYNGNATPRHFLWWANPAVKGGEGHQSVFPPDVTAVFDHGKR
                     AVSAFPIATGTYYKVDYSAGVDISCYKNVPVTTSYMAEKSQYDFVGAWCHDEDGGLLH
                     VANHHIAPGKKQWSWGHSEFGQAWDKSLTDNNGPYIELMTGIFADNQPDFTWLDAYEE
                     KRFEQYFLPYHSLGMVQNASRDAVIKLQRSKRGIEWGLYAISPLNGYRLAIREIGKCN
                     ALLDDAVALMPATAIQGVLHGINPERLTIELSDADGNIVLSYQEHQPQELPLLDVAKA
                     PLAAQDITSTDEAWFIGQHLEQYHHASRSPFDYYLRGVALDPLDYRCNLALAMLEYNR
                     ADFPQAVAYATQALKRAHALNKNPQCGQASLIRASAYERQGQYQQAEEDFWRAVWSGN
                     SKAGGYYGLARLAARNGNFDAGLDFCQQSLRACPTNQEVLCLHNLLLVLSGRQDNARV
                     QREKLLRDYPLNATLWWLNWFDGRSESALAQWRGLCQGRDVNALMTAGQLINWGMPTL
                     AAEMLNALDCQRTLPLYLQASLLPKAERGELVAKAIDVFPQFVRFPNTLEEVAALESI
                     EECWFARHLLACFYYNKRSYNKAIAFWQRCVEMSPEFADGWRGLAIHAWNKQHDYELA
                     ARYLDNAYQLAPQDARLLFERDLLDKLSGATPEKRLARLENNLEIALKRDDMTAELLN
                     LWHLTGQADKAADILATRKFHPWEGGEGKVTSQFILNQLLRAWQHLDAREPQQASELL
                     HAALHYPENLSEGRLPGQTDNDIWFWQAICANAQGDETEAMRCLRLAATGDRTINIHS
                     YYNDQPVDYLFWQGMALRLLGEQQTAQQLFSEMKQWAQEMAKTSIEADFFAVSQPDLL
                     SLYGDLQQQHKEKCLMVAMLASAGLGEVAQYESARAELTAINPAWPKAALFTTVMPFI
                     FNYVH"
     gene            3414..4607
                     /locus_tag="JN001_001282"
     CDS             3414..4607
                     /locus_tag="JN001_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HAY9052574.1"
                     /translation="MRACINNQQIRHHNKCVILELLYRQKRANKSTLARLAQISIPAV
                     SNILQELESEKRVVNIDDESQTRGHSSGTWLIAPEGDWTLCLNVTPTSIECQVANACL
                     SPKGEFEYLQIDAPTPQALLSEIEKCWHRHRKLWPDRTINLALAIHGQVDPVTGVSQT
                     MPQAPWTTPVEVKYLLEEKLGIRVMVDNDCVMLALAEKWQNNSQERDFCVINVDYGIG
                     SSFVINEQIYRGSLYGSGQIGHTIVNPDGVVCDCGRYGCLETVASLSALKKQARVWLK
                     SQPVNTQLDPEKLTTAQLIAAWQSGEPWITSWVDRSANAIGLSLYNFLNILNINQIWL
                     YGRSCAFGENWLNTIIRQTGFNPFDRDEGPSVKATQIGFGQLSRAQQVLGIGYLYVEA
                     QLRQI"
     gene            complement(4671..5924)
                     /locus_tag="JN001_001283"
     CDS             complement(4671..5924)
                     /locus_tag="JN001_001283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HAY9052575.1"
                     /translation="MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVM
                     QAQGSQLTNKYAEGYPGKRYYGGCEYVDIVEQLAIDRAKELFGADYANVQPHSGSQAN
                     FAVYTALLEPGDTVLGMNLAHGGHLTHGSPVNFSGKLYNIVPYGIDATGHIDYADLEK
                     QAKEHKPKMIIGGFSAYSGVVDWAKMREIADSIGAYLFVDMAHVAGLVAAGVYPNPVP
                     HAHVVTTTTHKTLAGPRGGLILAKGGSEELYKKLNSAVFPGGQGGPLMHVIAGKAVAL
                     KEAMEPEFKTYQQQVAKNAKAMVEVFLERGYKVVSGGTDNHLFLVDLVDKNLTGKEAD
                     AALGRANITVNKNSVPNDPKSPFVTSGIRVGTPAITRRGFKEAEAKELAGWMCDVLDS
                     INDEAVIERIKGKVLDICARYPVYA"
     gene            6252..7442
                     /gene="hmpA"
                     /locus_tag="JN001_001284"
     CDS             6252..7442
                     /gene="hmpA"
                     /locus_tag="JN001_001284"
                     /EC_number="1.14.12.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NO-inducible flavohemoprotein"
                     /protein_id="HAY9052576.1"
                     /translation="MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFN
                     MSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHL
                     LATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAK
                     TPRSALITSFELEPVDGGAVAEYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPDGKGYR
                     IAVKREEGGQVSNWLHNHANVGDVVKLVAPAGDFFMAVADDTPVTLISSGVGQTPMLA
                     MLDTLAKAGHTAQVNWFHAAENGDVHAFADEVKELGQSLPRFTAHTWYRQPSEADRAK
                     GQFDSEGLMDLSKLEGAFSDPTMQFYLCGPVGFMQFTAKQLVDLGVKQENIYYECFGP
                     HKVL"
     gene            complement(7487..7825)
                     /gene="glnB"
                     /locus_tag="JN001_001285"
     CDS             complement(7487..7825)
                     /gene="glnB"
                     /locus_tag="JN001_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017373484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulatory protein P-II"
                     /protein_id="HAY9052577.1"
                     /translation="MKKIDAIIKPFKLDDVREALAEVGITGMTVTEVKGFGRQKGHTE
                     LYRGAEYMVDFLPKVKIEIVVPDDIVDTCVDTIIRTAQTGKIGDGKIFVFDVARVIRI
                     RTGEEDDAAI"
     gene            complement(7886..9220)
                     /gene="glrR"
                     /locus_tag="JN001_001286"
     CDS             complement(7886..9220)
                     /gene="glrR"
                     /locus_tag="JN001_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator GlrR"
                     /protein_id="HAY9052578.1"
                     /translation="MSHKPAHLLLVDDDPGLLKLLGLRLTSEGYSVVTAESGAEGLRV
                     LNREKVDLVISDLRMDEMDGMQLFAEIQKVQPGMPVIILTAHGSIPDAVAATQQGVFS
                     FLTKPVDKDALYQAIDDALEQSAPATDERWREAIVTRSPLMLRLLEQARLVAQSDVSV
                     LINGQSGTGKEIFAQAIHNASPRNSKPFIAINCGALPEQLLESELFGHARGAFTGAVS
                     NREGLFQAAEGGTLFLDEIGDMPAPLQVKLLRVLQERKVRPLGSNRDIDINVRIISAT
                     HRDLPKAMARGEFREDLYYRLNVVSLKIPALAERTEDIPLLANHLLRQAAERHKPFVR
                     AFSTDAMKRLMTASWPGNVRQLVNVIEQCVALTSSPVISDALVEQALEGENTALPTFV
                     EARNQFELNYLRKLLQITKGNVTHAARMAGRNRTEFYKLLSRHELDANDFKE"
     gene            complement(9210..9923)
                     /gene="qseG"
                     /locus_tag="JN001_001287"
     CDS             complement(9210..9923)
                     /gene="qseG"
                     /locus_tag="JN001_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system QseEF-associated
                     lipoprotein QseG"
                     /protein_id="HAY9052579.1"
                     /translation="MRHIFQRLLPRRLWLAGLPCLALLGCVQNHNKPAIDTPAEEKIP
                     VYQLADYLSTECSDIWALQGKSTETNPLYWLRAMDCADRLMPAQSRQQARQYDDGCWQ
                     NTFKQGILLADAKITPYERRQLVARIEALSTEIPAQVRPLYQLWRDGQALQLQLAEER
                     QRYSKLQQSSDSELDTLRQQHHVLQQQLELTTRKLENLTDIERQLSTRKPAGNFSPDT
                     PHESEKPAPSTHEVTPDEP"
     gene            complement(10088..11515)
                     /gene="qseE"
                     /locus_tag="JN001_001288"
     CDS             complement(10088..11515)
                     /gene="qseE"
                     /locus_tag="JN001_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417051.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two component system sensor histidine kinase
                     QseE/GlrK"
                     /protein_id="HAY9052580.1"
                     /translation="MKRWPVFPRSLRQLVMLAFLLILLPLLVLAWQAWQSLNALSDQA
                     ALVNRTTLIDARRSEAMTNAALEMERSYRQYCVLDDPTLAKVYQSQRKRYSEMLDAHA
                     GVLPDDKLYQALRQDLNNLAQLQCNNSGPDAAAAARLEAFASANTEMVQATRTVVFSR
                     GQQLQREIAERGQYFGWQSLVLFLVSLVMVLLFTRMIIGPVKNIERMINRLGEGRSLG
                     NSVSFSGPSELRSVGQRILWLSERLSWLESQRHQFLRHLSHELKTPLASMREGTELLA
                     DQVVGPLTPEQKEVVSILDSSSRNLQKLIEQLLDYNRKQADSAVELENVELAPLVETV
                     VSAHSLPARAKMMHTDVDLKATACLAEPMLLMSVLDNLYSNAVHYGAESGNICLRSSS
                     HGARVYIDVINTGTPIPQEERAMIFEPFFQGSHQRKGVVKGSGLGLSIARDCIRRMQG
                     ELYLVDESGQDVCFRIELPSSKNTK"
     gene            complement(12073..15960)
                     /gene="purL"
                     /locus_tag="JN001_001289"
                     /gene_synonym="purI"
     CDS             complement(12073..15960)
                     /gene="purL"
                     /locus_tag="JN001_001289"
                     /gene_synonym="purI"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase"
                     /protein_id="HAY9052581.1"
                     /translation="MMEILRGSPALSAFRINKLLARFQAARLPVHNIYAEYVHFADLN
                     APLNDDEHAQLERLLKYGPALASHAPQGKLLLVTPRPGTISPWSSKATDIAHNCGLQQ
                     VNRLERGVAYYIEAGTLTNEQWQQVTAELHDRMMETVFFDLDDAEQLFAHHQPTPVTS
                     VDLLGQGRQALIDANLRLGLALAEDEIDYLQDAFTKLGRNPNDIELYMFAQANSEHCR
                     HKIFNADWIIDGEQQPKSLFRMIKNTFETTPDHVLSAYKDNAAVMEGSEVGRYFADHE
                     TGRYDFHQEPAHILMKVETHNHPTAISPWPGAATGSGGEIRDEGATGRGAKPKAGLVG
                     FSVSNLRILGFEQPWEEDFGKPERIVTALDIMTEGPLGGAAFNNEFGRPALNGYFRTY
                     EEKVNSHNGEELRGYHKPIMLAGGIGNIRADHVQKGEINVGAKLVVLGGPAMNIGLGG
                     GAASSMASGQSDADLDFASVQRDNPEMERRCQEVIDRCWQLGDANPILFIHDVGAGGL
                     SNAMPELVSDGGRGGKFELRDILSDEPGMSPLEIWCNESQERYVLAVAADQLPLFDEL
                     CKRERAPYAVIGEATEELHLSLHDRHFDNQPIDLPLDVLLGKTPKMTRDVQTLKAKGD
                     ALVREGITIADAVKRILHLPTVAEKTFLVTIGDRSVTGMVARDQMVGPWQVPVANCAV
                     TTASLDSYYGEAMAIGERAPVALLDFAASARLAVGEALTNIAATQIGDIKRIKLSANW
                     MAAAGHPGEDAGLYEAVKAVGEELCPALGLTIPVGKDSMSMKTRWQEGNEEREMTSPL
                     SLVISAFARVEDVRHTITPQLSTEDNALLLIDLGKGNNALGATALAQVYRQLGDKPAD
                     VRDVAQLKGFYDAIQALVAQRKLLAYHDRSDGGLLVTLAEMAFAGHCGINADIASLGD
                     DRLAALFNEELGAVIQVRAADREAVESVLAQHGLADCVHYVGQAVSGDRFVITANGQT
                     VFSESRTTLRVWWAETTWQMQRLRDNPECADQEHQAKSNDADPGLNVKLSFDINEDVA
                     APYIATGARPKVAVLREQGVNSHVEMAAAFHRAGFDAIDVHMSDLLTGRTGLEDFHAL
                     VACGGFSYGDVLGAGEGWAKSILFNDRVRDEFATFFHRPQTLALGVCNGCQMMSNLRE
                     LIPGSELWPRFVRNTSDRFEARFSLVEVTQSPSLLLQGMVGSQMPIAVSHGEGRVEVR
                     DAAHLAALESKGLVALRYVDNFGKVTETYPANPNGSPNGITAVTTESGRVTIMMPHPE
                     RVFRTVSNSWHPENWGEDGPWMRIFRNARKQLG"
     gene            16220..17776
                     /gene="mltF"
                     /locus_tag="JN001_001290"
     CDS             16220..17776
                     /gene="mltF"
                     /locus_tag="JN001_001290"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417053.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     MltF"
                     /protein_id="HAY9052582.1"
                     /translation="MKKLKINYLFIGILALLLAVALWPSIPWFGKADNRIAAIQARGE
                     LRVSTIHTPLTYNEINGKPFGLDYELAKQFADYLGVKLKVTVRQNISQLFDDLDNGNA
                     DLLAAGLVYNSERVKNYQPGPTYYSVSQQLVYKVGQYRPRTLCNLTAEQLTVAPGHVV
                     VNDLQTLKETKFPELSWKVDDKKGSAELMEDVIEGKLDYTIADSVAISLFQRVHPELA
                     VALDITDEQPVTWFSPLDGDNTLSAALLDFFNEMNEDGTLARIEEKYLGHGDDFDYVD
                     TRTFLRAVDAVLPQLKPLFEKYAEEIDWRLLAAIAYQESHWDAQATSPTGVRGMMMLT
                     KNTAQSLGITDRTDAEQSISGGVRYLQDMMSKVPESVPENERIWFALAAYNMGYAHML
                     DARALTAKTKGNPDSWADVKQRLPLLSQKPYYSKLTYGYARGHEAYAYVENIRKYQIS
                     LVGYLQEKEKQATEAAMQLAQDYPAVSPTELGKEKFPFLSFLSQSSSNYLTHSPSLLF
                     SRKGSEEKQN"
     gene            complement(17773..18309)
                     /gene="tadA"
                     /locus_tag="JN001_001291"
     CDS             complement(17773..18309)
                     /gene="tadA"
                     /locus_tag="JN001_001291"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA adenosine(34) deaminase TadA"
                     /protein_id="HAY9052583.1"
                     /translation="MRRAFITGVFFLSEVEFSHEYWMRHALTLAKRAWDEREVPVGAV
                     LVHNNRVIGEGWNRPIGRHDPTAHAEIMALRQGGLVMQNYRLIDATLYVTLEPCVMCA
                     GAMIHSRIGRVVFGARDAKTGAAGSLMDVLHHPGMNHRVEITEGILADECAALLSDFF
                     RMRRQEIKAQKKAQSSTD"
     gene            complement(18334..18969)
                     /gene="yfhb"
                     /locus_tag="JN001_001292"
     CDS             complement(18334..18969)
                     /gene="yfhb"
                     /locus_tag="JN001_001292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417055.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase C"
                     /protein_id="HAY9052584.1"
                     /translation="MATHERRVVFFDLDGTLHQQDMFGSFLRYLLRRQPLNALLVLPL
                     LPIIAIALLIKGRAARWPMSLLLWGCTFGHSEARLQTLQADFVRWFRDNVTAFPLVQE
                     RLTTYLLSSDADIWLITGSPQPLVEAVYFDKPWLPRVNLIASQIQRGYGGWVLTMRCL
                     GHEKVAQLERKIGTPLRLYSGYSDSNQDNPLLYFCQHRWRVTPRGELQQLE"
     gene            19178..20026
                     /locus_tag="JN001_001293"
     CDS             19178..20026
                     /locus_tag="JN001_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417056.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY9052585.1"
                     /translation="MNGLLRIRQRYQGLAQSDKKLADYLLLQPDTARHLSSQQLANEA
                     GVSQSSVVKFAQKLGYKGFPALKLALSEALASQPESPSVPIHNQIRGDDPLRLVGEKL
                     IKENTAAMYATLNVNSEEKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGFN
                     AAAVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPN
                     ALQQRASHCLYTIAEEQATNSASISACHAQGMLTDLLFIALIQQDLELAPERIRHSEA
                     LVKKLV"
     gene            20082..20342
                     /gene="yfhL"
                     /locus_tag="JN001_001294"
     CDS             20082..20342
                     /gene="yfhL"
                     /locus_tag="JN001_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster ferredoxin YfhL"
                     /protein_id="HAY9052586.1"
                     /translation="MALLITKKCINCDMCEPECPNEAISMGDHIYEINSDKCTECVGH
                     YETPTCQKVCPIPNTIVKDPAHVETEEQLWDKFVLMHHADKI"
     gene            complement(20536..20616)
                     /gene="shoB"
                     /locus_tag="JN001_001295"
     CDS             complement(20536..20616)
                     /gene="shoB"
                     /locus_tag="JN001_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin ShoB"
                     /protein_id="HAY9052587.1"
                     /translation="MTDCRYLIKRVIKIIIAVLQLILLFL"
     gene            complement(21036..21416)
                     /locus_tag="JN001_001296"
     CDS             complement(21036..21416)
                     /locus_tag="JN001_001296"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HAY9052588.1"
                     /translation="MAILGLGTDIVEIARIEAVIARSGERLARRVLSDNEWAIWKTHH
                     QPVRFLAKRFAVKEAAAKAFGTGIRNGLAFNQFEVFNDELGKPRLRLWGEALKLAEKL
                     GVVNMHVTLADERHYACATVIIES"
     gene            complement(21416..22147)
                     /gene="pdxJ"
                     /locus_tag="JN001_001297"
     CDS             complement(21416..22147)
                     /gene="pdxJ"
                     /locus_tag="JN001_001297"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HAY9052589.1"
                     /translation="MAELLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITV
                     HLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPEKRQEVT
                     TEGGLDVAGQREKMRDACKRLTDAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYA
                     DAKTDAEQAQELVRIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAI
                     IGRAVMTGLKDAVAEMKRLMLEARG"
     gene            complement(22159..22887)
                     /gene="recO"
                     /locus_tag="JN001_001298"
     CDS             complement(22159..22887)
                     /gene="recO"
                     /locus_tag="JN001_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HAY9052590.1"
                     /translation="MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRS
                     TLKGALQPFTPLLLRFGGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEY
                     ETRFSELFFDYLHCIQSLAGATGTPEPALRRFELALLGHLGYGVNFTYCAGSGEPVDD
                     TMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLG
                     GKPLKSRELFRQFMPKRTVKTHYE"
     gene            complement(22899..23804)
                     /gene="era"
                     /locus_tag="JN001_001299"
     CDS             complement(22899..23804)
                     /gene="era"
                     /locus_tag="JN001_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HAY9052591.1"
                     /translation="MSIDKSYCGFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTR
                     HRIVGIHTEGAYQAIYVDTPGLHMEEKRAINRLMNKAASSSIGDVELVIFVVEGTRWT
                     PDDEMVLNKLRDGKAPVILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGL
                     NVDTIAAIVRKHLPEATHHFPEDYITDRSQRFMASEIIREKLMRFLGAELPYSVTVEI
                     ERFVSNERGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLE
                     LWVKVKSGWADDERALRSLGYVDDL"
     gene            complement(23801..24481)
                     /gene="rnc"
                     /locus_tag="JN001_001300"
     CDS             complement(23801..24481)
                     /gene="rnc"
                     /locus_tag="JN001_001300"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003848606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HAY9052592.1"
                     /translation="MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLG
                     DSILSYVIANALYHRFPRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELK
                     SGGFRRESILADTVEALIGGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRL
                     QEYLQGRHLPLPTYLVVQVRGEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQ
                     ALKKLELE"
     gene            complement(24754..25728)
                     /gene="lepB"
                     /locus_tag="JN001_001301"
     CDS             complement(24754..25728)
                     /gene="lepB"
                     /locus_tag="JN001_001301"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HAY9052593.1"
                     /translation="MANMFALILVIATLVTGILWCVDKFFFAPKRRERQAAAQAAAGD
                     SLDKATLKKVAPKPGWLETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFI
                     LVEKFAYGIKDPIYQKTLIETGHPKRGDIVVFKYPEDPKLDYIKRAVGLPGDKVTYDP
                     VSKELTIQPGCSSGQACENALPVTYSNVEPSDFVQTFSRRNGGEATSGFFEVPKNETK
                     ENGIRLSERKETLGDVTHRILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNR
                     DNSADSRYWGFVPEANLVGRATAIWMSFDKQEGEWPTGVRLSRIGGIH"
     gene            complement(25744..27543)
                     /gene="lepA"
                     /locus_tag="JN001_001302"
     CDS             complement(25744..27543)
                     /gene="lepA"
                     /locus_tag="JN001_001302"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010434076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HAY9052594.1"
                     /translation="MKNIRNFSIIAHIDHGKSTLSDRIIQICGGLSDREMEAQVLDSM
                     DLERERGITIKAQSVTLDYKASDGETYQLNFIDTPGHVDFSYEVSRSLAACEGALLVV
                     DAGQGVEAQTLANCYTAMEMDLEVVPVLNKIDLPAADPERVAEEIEDIVGIDATDAVR
                     CSAKTGVGVQDVLERLVRDIPPPEGDPEGPLQALIIDSWFDNYLGVVSLIRIKNGTLR
                     KGDKVKVMSTGQTYNADRLGIFTPKQVDRTELKCGEVGWLVCAIKDIHGAPVGDTLTL
                     ARNPAEKALPGFKKVKPQVYAGLFPVSSDDYEAFRDALGKLSLNDASLFYEPESSSAL
                     GFGFRCGFLGLLHMEIIQERLEREYDLDLITTAPTVVYEVETTSREVIYVDSPSKLPA
                     VNNIYELREPIAECHMLLPQAYLGNVITLCVEKRGVQTNMVYHGNQVALTYEIPMAEV
                     VLDFFDRLKSTSRGYASLDYNFKRFQASDMVRVDVLINGERVDALALITHRDNSQNRG
                     RELVEKMKDLIPRQQFDIAIQAAIGTHIIARSTVKQLRKNVLAKCYGGDISRKKKLLQ
                     KQKEGKKRMKQIGNVELPQEAFLAILHVGKDNK"
     gene            complement(27741..28220)
                     /gene="rseC"
                     /locus_tag="JN001_001303"
     CDS             complement(27741..28220)
                     /gene="rseC"
                     /locus_tag="JN001_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SoxR-reducing system protein RseC"
                     /protein_id="HAY9052595.1"
                     /translation="MIKEWATVVSWQNGQALVSCDVKASCSSCASRAGCGSRVLNKLG
                     PQTTHTIVVPCDEPLVPGQKVELGIAEGSLLSSALLVYMSPLVGLFLIASLFQLLFAS
                     DVAALCGAVLGGIGGFLIARGYSRKFAARAEWQPIILSVALPPGLVRFETSSEDASQ"
     gene            complement(28217..29173)
                     /gene="rseB"
                     /locus_tag="JN001_001304"
     CDS             complement(28217..29173)
                     /gene="rseB"
                     /locus_tag="JN001_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-E factor regulatory protein RseB"
                     /protein_id="HAY9052596.1"
                     /translation="MKQLWFAMSLVTGSLLFSANASATPASGALLQQMNLASQSLNYE
                     LSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGDEISYFEPGLEPFTL
                     NGDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWM
                     DTESKLPMRVDLLDRDGETLEQFRVIAFNVNQDISSSMQTLAKANLPPLLSVPVGEKA
                     KFSWTPTWLPQGFSEVSSSRRPLPTMDNMPIESRLYSDGLFSFSVNVNRATPSSTDQM
                     LRTGRRTVSTSVRDNAEITIVGELPPQTAKRIAENIKFGAAQ"
     gene            complement(29173..29823)
                     /gene="rseA"
                     /locus_tag="JN001_001305"
     CDS             complement(29173..29823)
                     /gene="rseA"
                     /locus_tag="JN001_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-E factor RseA"
                     /protein_id="HAY9052597.1"
                     /translation="MQKEQLSALMDGETLDSELLNELAHNPEMQKTWESYHLIRDSMR
                     GDTPEVLHFDISSRVMAAIEEEPVRQPATLIPEAQPAPHQWQKMPFWQKVRPWAAQLT
                     QMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSEATANN
                     GQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ"
     gene            complement(29856..30431)
                     /gene="rpoE"
                     /locus_tag="JN001_001306"
     CDS             complement(29856..30431)
                     /gene="rpoE"
                     /locus_tag="JN001_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005070454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoE"
                     /protein_id="HAY9052598.1"
                     /translation="MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPSG
                     DVPDVVQEAFIKAYRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAIE
                     AENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIA
                     AIMDCPVGTVRSRIFRAREAIDNKVQPLIRR"
     gene            complement(30428..30583)
                     /gene="rseD"
                     /locus_tag="JN001_001307"
     CDS             complement(30428..30583)
                     /gene="rseD"
                     /locus_tag="JN001_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rpoE leader peptide RseD"
                     /protein_id="HAY9052599.1"
                     /translation="MIRLQHDKQKQMRYGTLQKRDTLTLCLLKLQLMEWRFDSAWKFG
                     LGRLYLG"
     gene            30839..>31371
                     /locus_tag="JN001_001308"
     CDS             30839..>31371
                     /locus_tag="JN001_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY9052600.1"
                     /translation="MNTLPEHSCDVLIIGSGAAGLSLALRLADQHQVIVLSKGPVTEG
                     STFYAQGGIAAVFDETDSIDSHVEDTLIAGAGICDRHAVEFVASNARSCVQWLIDQGV
                     LFDTHVQPNGEESYHLTREGGHSHRRILHAADATGREVQSTLVSKAQNHPNIRVLERS
                     NAVDLIVSDKIGLPGTRR"
BASE COUNT         7502 a         8403 c         7918 g         7548 t
ORIGIN      
        1 acagttaata gggtttagtg aacgtagtta aaaataaaag gcatcacagt ggtgaataat
       61 gccgctttcg gccaggccgg attaatcgcc gtcaattcag cgcgagcaga ctcatattgc
      121 gcaacctccc cgagtcccgc ggacgccagc atcgccacca tcaggcattt ttctttatgc
      181 tgctgttgta aatcgccata cagcgataac aggtcaggtt gtgaaacagc aaagaaatcc
      241 gcctcaatac tggttttcgc catctcttgc gcccactgtt tcatttcact aaacagttgc
      301 tgtgcggttt gctgttcacc cagcagtcgc agcgccattc cttgccagaa gagataatca
      361 accggctgat cgttgtaata actgtggatg ttaatggtgc gatcgccggt cgccgccaga
      421 cgtaaacaac gcatcgcttc agtttcatcg ccctgcgcgt tggcgcatat cgcctgccag
      481 aaccagatgt cgttatcagt ttgccccggt aaacggcctt cgcttaaatt ctccggataa
      541 tgcagcgcgg catgaagcag ttcgctggcc tgctgcggct ctctggcatc aagatgctgc
      601 caggcgcgta ataactggtt gaggataaac tgactggtga ccttcccttc cccgccttcc
      661 cacgggtgga atttacgcgt ggcgagaatg tccgccgctt tgtctgcctg acccgtgaga
      721 tgccacaaat tgagcagttc tgcggtcatg tcgtcgcgtt tcagcgcaat ttccagatta
      781 ttttccagac gcgccagtcg tttctccggt gtggctccac ttaacttatc aagcaaatcc
      841 cgttcgaaaa gcagacgtgc atcctgcggc gcaagctgat aagcattatc aagataacgc
      901 gcggccagct cataatcgtg ttgcttattc cacgcatgga tcgctaaccc gcgccagccg
      961 tcggcaaact ccggcgacat ctctacgcaa cgttgccaaa aggcaatggc tttgttgtag
     1021 ctacgtttgt tgtagtagaa gcaggccagt aaatggcgag caaaccagca ctcttcaata
     1081 ctctccagcg ccgccacttc ttccagcgta ttcgggaaac ggacaaactg cgggaagaca
     1141 tcaatggctt ttgcgaccag ttcgccacgt tcggctttcg gcagcaagct ggcttgcagg
     1201 taaagcggca gcgtgcgctg gcagtccagt gcgttcagca tctctgccgc cagggtgggc
     1261 attccccagt taatcagttg cccggcggtc atcagggcgt taacgtcgcg tccctgacac
     1321 agaccgcgcc actgcgcgag agctgattcg ctacgaccat cgaaccagtt cagccaccac
     1381 agagtggcgt tcagcggata atcgcgcagc agtttctcgc gctgcacacg cgcgttgtcc
     1441 tgacgaccac ttaacaccag cagcagatta tgcaggcaaa gcacttcctg attggttggg
     1501 caggcgcgaa gactttgttg gcaaaaatcc agaccagcgt cgaagttacc attacgcgcc
     1561 gccagtcgtg ccaggccata atagccaccg gctttgctgt tgccgctcca gaccgcacgc
     1621 cagaaatcct cttcggcttg ttgatattgt ccctgacgtt cgtaagcact ggcgcgaatc
     1681 aaactcgcct gtccgcactg cggatttttg ttcagcgcat gtgcgcgttt cagagcctga
     1741 gtggcatacg ccaccgcttg cgggaaatcg gcgcggttat attccagcat cgccagcgcc
     1801 aggttacagc ggtaatccag cggatccagc gccacgccgc gcaggtagta atcgaacggt
     1861 gaacggctgg cgtgatgata ttgctccaga tgctgaccga taaaccaggc ttcatctgta
     1921 ctggtaatgt cttgtgctgc cagtggcgct ttggcgacgt ccagcaacgg caactcttgc
     1981 ggctgatgtt cctgataact cagtacaata ttgccgtcgg catcggagag ctcaatggtc
     2041 agcctttcag gattgatacc gtgcaacacg ccctggatgg cggtcgcagg catcagtgcc
     2101 acggcatcat caagtaacgc gttgcatttg ccgatttcgc ggatcgccag gcggtatccg
     2161 ttcaacggag agatggcata cagcccccac tcaatccccc gcttactacg ctggagtttt
     2221 atcaccgcat cgcgggaggc attttgcacc atgcccaaag aatgataagg caggaaatac
     2281 tgctcaaaac gcttctcttc gtaagcatca agccaggtaa aatcgggctg gttatcggca
     2341 aaaataccgg tcatcagttc gatatacggg ccgttattgt cggtcagact cttatcccac
     2401 gcctggccaa attcactgtg tccccaactc cactgttttt tacctggcgc aatatggtgg
     2461 ttggcaacgt gcagcaaacc gccatcttca tcgtgacacc acgcgccgac aaaatcgtac
     2521 tgcgattttt cggccatata tgaggttgta acaggcacat ttttatagca agaaatgtcc
     2581 actccggcgg agtagtccac tttgtagtaa gtgccggtgg cgatggggaa agcggagacg
     2641 gcccgtttgc cgtgatcaaa caccgcagtc acatccggtg ggaaaacgct ctgatgccct
     2701 tccccccctt tcactgccgg gttggcccac cacaagaaat gacgcggcgt ggcgttaccg
     2761 ttatagacgc ggctggcgat ttccagcgcc gcccggtcag ggcgcagggt gaaacctgtc
     2821 atcacctgta aaccatgcat cggctccgtt tcgcctaccc acaccgtctg tgcaccgtct
     2881 tcatgggctt cgagggtgaa atcaacgggc ataaaggtgg tcgggcgatg atgttgcggc
     2941 cagttaaact caatcccacc ggaaatccac ggccccagca gccccaccag cgcaggttta
     3001 atgacttcat tgtgataaac aaaatcgcgc tgtttcactt tatcccacgc gcgatgcacc
     3061 cgaccgccca gttccggcag gatcatcact ttgatgtagt cgttttccag ccacaccgcc
     3121 tgccaggatt tcagggtttt ctgctcgctc agcgtatcgg tcacgccgta gggataaacc
     3181 gcgccggacg atccctgata aacgcgattt tccaggaaca tgggatgtat atcctgcggc
     3241 ccggtttcat aggtcgggat ctcaacgcgc tcttgccaca cttttactgg agtcatggtg
     3301 ccctcaatat taacaagaca tactgaatta aaagatttgt ggcagtgtat tgaacaatct
     3361 ggcaatgttt tcgcggaata atcacgcaat taactaaaca aggtttagtg aagatgagag
     3421 cctgcattaa caatcaacag attcgccacc ataacaaatg cgtgattctg gaactgctgt
     3481 accggcaaaa gcgcgccaat aaatcaacgc tggcccggct ggcgcaaatt tcgattccgg
     3541 cagtcagtaa tattttgcag gaactggaaa gcgaaaaacg ggtggtgaat attgacgatg
     3601 aaagccagac gcgcgggcat agtagcggta catggctgat tgcgccggaa ggtgactgga
     3661 cgctgtgcct gaacgtgacg cccaccagta ttgagtgtca ggttgctaat gcttgtttaa
     3721 gtccgaaagg tgaatttgag tatttacaga ttgatgcacc gacgccgcag gcgctgctgt
     3781 ccgaaatcga aaaatgctgg catcgccacc gtaaattgtg gccggaccgc accatcaatc
     3841 tggcgctggc aatccacggt caggttgatc cggtgaccgg cgtgtcgcaa accatgccgc
     3901 aagcgccgtg gacaacgccg gttgaggtga agtatctgct ggaagagaag ctgggcattc
     3961 gggtgatggt cgataatgac tgcgtgatgc tggcgctggc ggagaaatgg caaaataatt
     4021 cgcaggaacg ggatttctgc gtgatcaacg ttgattacgg cattggctcg tcgttcgtga
     4081 ttaacgagca aatttatcgc ggcagtttgt atggtagcgg acaaattggt cacaccatcg
     4141 ttaatccgga tggcgtcgtc tgcgactgtg gacgttacgg ctgcctggaa accgtcgcct
     4201 cgttaagtgc attaaaaaaa caggcgcggg tatggctaaa atcacaaccg gttaatactc
     4261 agcttgatcc tgaaaaactg acaaccgcgc agttaatcgc tgcctggcag agtggagaac
     4321 cgtggatcac cagctgggtt gatcgctctg ccaatgccat tggtttgagt ctgtataact
     4381 tcctcaacat cctcaatatt aatcagattt ggttgtacgg tcgcagttgt gcctttggtg
     4441 agaactggct taatactatt attcgccaga caggatttaa cccgttcgac cgcgacgaag
     4501 gaccgagcgt gaaagcgacg caaattggct tcgggcaatt aagccgcgca caacaggtgc
     4561 tgggaattgg ctatttgtat gttgaggcgc agttacgaca gatttgatgg cgcgataacg
     4621 tagaaaggct tcccgaagga agcctttttt caacagatta accgtttcgc ttatgcgtaa
     4681 accgggtaac gtgcgcagat gtcgagaact ttacctttga tgcgctcgat aacggcttca
     4741 tcattgatgc tgtccagcac gtcacacatc cagccagcca gttctttcgc ttctgcttct
     4801 ttgaagccgc gacgcgtaat tgccggagta cccacgcgaa taccggaggt cacaaacggg
     4861 ctcttcggat cgttcggtac gctgtttttg ttgacggtga tgttagcacg gcccagagcg
     4921 gcgtctgctt ctttaccggt caggttttta tcaaccagat caaccaggaa caggtggtta
     4981 tcagtgccgc cggaaaccac tttgtagccg cgctcgagga acacttctac catcgcttta
     5041 gcgtttttcg cgacctgctg ctggtaagtt ttgaactcag gctccatcgc ttctttcaga
     5101 gcaaccgctt taccggcgat tacgtgcatc aacggaccgc cctgaccacc agggaaaacg
     5161 gcagagttca gttttttgta cagctcttcg ctaccacctt tcgccaggat caggccgccg
     5221 cgcggacccg ccagggtttt gtgagtggtg gtagtaacaa cgtgagcatg aggaaccggg
     5281 ttcgggtaga cgccagcagc aaccaggccc gcaacgtgcg ccatatcaac gaacaggtaa
     5341 gcaccgatgc tgtcagcgat ttcacgcatt ttcgcccagt ccaccacgcc ggaatatgca
     5401 gagaaaccac cgataatcat tttcggcttg tgttctttgg cttgtttttc cagatcggcg
     5461 tagtcgatat gaccggtagc atcgataccg taaggaacga tgttgtacag tttaccggag
     5521 aagttaaccg gagaaccgtg agtcaggtga ccgccatgcg ccaggttcat acccagaacg
     5581 gtatcacctg gttccagcag cgcggtgtag accgcaaagt tagcctggga gccggagtgc
     5641 ggctggacgt tagcgtagtc agcgccgaac agttctttcg cacgatcgat cgccagttgt
     5701 tcaacgatat caacatactc gcaaccgccg tagtagcgtt tgcccggata accttcagca
     5761 tatttgttgg tcagctgaga accctgcgcc tgcattacgc gcgggctggt gtagttttcg
     5821 gaggcgatca gttcgatgtg ctcttcctga cgtacttttt cctgctccat agcctgccac
     5881 agttcggcat cataatcggc aatgttcatt tcacgcttta acatccgcat ctcctgactc
     5941 agctaacaat aaaatttttg gcctttatag gcggtcctgt tggacaacgg cgaacagtat
     6001 aaccgaatca ttgtgcgata acaggtcttg acaaaggaat ttacgcaaac gattaccttc
     6061 aggctacgca aggctttgga gaataaagag cttgcaaccg gaaacggatt tcttttcagg
     6121 tttgtgatgc aaatttttca cttcatcaca ttctttctga aaaacaccaa agaaccattt
     6181 acattgcagg gctatttttt ataagatgca tttgaaatac atcaattaag atgcaaaaaa
     6241 aggaagacca tatgcttgac gctcaaacca tcgctacagt aaaagccacc atccctttac
     6301 tggtggaaac ggggccaaag ttaaccgccc atttctacga ccgtatgttt actcataacc
     6361 cagaactcaa agaaattttt aacatgagta accagcgtaa tggcgatcaa cgtgaagccc
     6421 tgtttaacgc tattgccgcc tacgccagta atattgaaaa cctgcctgcg ctgctgccag
     6481 cggtagaaaa aatcgcgcag aagcacacca gcttccagat caaaccggaa cagtacaaca
     6541 tcgtcggtga acacctgttg gcaacgctgg acgaaatgtt cagcccgggg caggaagtgc
     6601 tggacgcgtg gggtaaagcc tatggtgtac tggctaatgt atttatcaat cgcgaggcgg
     6661 aaatctataa cgaaaacgcc agcaaagccg gtggttggga aggtactcgc gatttccgca
     6721 ttgtggctaa aacaccgcgc agcgcgctta tcaccagctt cgaactggag ccggtcgacg
     6781 gtggcgcagt ggcagaatac cgtccggggc aatatctcgg cgtctggctg aagccggaag
     6841 gtttcccgca tcaggaaatt cgtcagtact ctttgactcg caaaccggat ggcaaaggct
     6901 atcgtattgc ggtgaaacgc gaagagggtg ggcaggtatc caactggttg cacaatcacg
     6961 ccaatgttgg cgatgtcgtg aaactggtcg ctccggcagg tgatttcttt atggctgtcg
     7021 cagatgacac accagtgacg ttaatctctt ccggtgttgg tcaaacgcca atgctggcaa
     7081 tgctcgacac gctggcaaaa gcaggccaca cagcacaagt gaactggttc catgcggcag
     7141 aaaatggcga tgttcacgcc tttgccgatg aagttaagga actggggcag tcactgccgc
     7201 gctttaccgc gcacacctgg tatcgtcagc cgagcgaagc cgatcgcgct aaaggtcagt
     7261 ttgatagcga aggtctgatg gatttgagca aactggaagg tgcgttcagc gatccgacaa
     7321 tgcagttcta tctctgcggc ccggttggct tcatgcagtt taccgcgaaa cagttagtgg
     7381 atctgggcgt gaagcaggaa aacatttatt acgaatgctt tggcccgcat aaggtgctgt
     7441 aatttgatgt tgccggatgg aaacatccgg caacccttga cgcggtttaa attgccgcgt
     7501 cgtcctcttc accggtacgg atgcgaatga cccgtgccac gtcaaagacg aagattttac
     7561 cgtcaccgat tttgccggtt tgcgccgtgc gaataatggt atcgacacag gtatcgacaa
     7621 tgtcgtccgg tacgacaatc tcaattttca ctttcggcag aaaatccacc atatactccg
     7681 cgccgcggta cagctcggta tggcctttct ggcgaccaaa gcctttcact tcggtcaccg
     7741 tcatgccggt aataccgact tcggccagtg cttcgcggac atcgtccagc ttgaagggtt
     7801 ttataatcgc atcaatcttt ttcatgctat tccttgaaaa ggtcgcctgt cttttgatct
     7861 gctaaacgta acacataacg ccaattcatt ccttgaaatc gtttgcatcc agctcgtgtc
     7921 gggaaagcag tttataaaat tctgtccggt tgcgccccgc cattctcgcc gcgtgggtga
     7981 cgttgccttt ggtaatttgc agcagcttac gcaaatagtt gagttcaaac tgattacgtg
     8041 cctcaacaaa ggttggcagc gccgtgtttt caccctccag cgcctgctct actaatgcat
     8101 cgctaataac cggagatgag gtcagcgcca cgcactgttc aatcacgttg accaactggc
     8161 gcacattacc cggccagcta gcggtcatca ggcgtttcat cgcatcagtg gagaacgcgc
     8221 ggacaaacgg tttatgtcgc tctgccgcct ggcgcaacag gtgatttgcc agaagcggaa
     8281 tgtcttctgt gcgctctgcc agagccggaa ttttcaggct gacaacgttg aggcggtaat
     8341 agagatcttc gcggaattcc ccgcgcgcca tcgcttttgg cagatcacgg tgagtggcag
     8401 aaataatccg cacattgata tcaatatcgc ggttactgcc cagcgggcgc actttacgct
     8461 cctgcaacac gcgcagcagt ttgacctgta acggcgcagg catatcgcca atttcatcga
     8521 gaaatagcgt tccgccttcc gccgcctgga ataaaccttc gcgattgctg acagcgccag
     8581 taaacgcgcc acgcgcatga ccaaacagct ccgactccag caattgctcg ggcaatgcgc
     8641 cacagttaat agcaataaat ggtttgctgt tgcgcgggct ggcgttgtgg atagcctggg
     8701 cgaaaatctc tttcccggtg ccgctctgac cgttaatcaa aacgctgacg tctgattgcg
     8761 ccaccagccg cgcctgttcc agcaaacgca gcatcagcgg gctgcgggtg acaattgcct
     8821 cgcgccagcg ttcatcggtg gctggcgcgg attgctccag cgcatcgtca attgcctgat
     8881 atagcgcgtc tttgtcgaca ggcttggtga ggaaactaaa aacgccctgc tgtgttgcag
     8941 caacggcatc ggggatagaa ccatgcgcag taagaataat tactggcatt cccggctgca
     9001 ctttctggat ttcagcaaat agctgcatac cgtccatttc atccatccgc aggtcgctga
     9061 taactaaatc tactttttcg cgattcagta cccgtaatcc ttcagcgcca ctttccgccg
     9121 tgaccacact gtagccttcg ctggtcaggc gcaggccaag cagtttcagc aatcccggat
     9181 cgtcatcgac caataataaa tgcgcaggtt tatggctcat caggagtgac ctcatgggtg
     9241 gatggcgcgg gcttttcact ctcgtgcggc gtatccggcg agaaatttcc agccggtttg
     9301 cgggtcgaga gctggcgttc aatatcggtc aggttttcca gcttgcgggt ggtgagttcc
     9361 agttgctgct gtagaacgtg atgttgctgg cgcaatgtat ccagctcgct gtcgctggac
     9421 tgctggagtt tactgtaacg ttggcgctct tccgccagtt gcagttgcag cgcctgaccg
     9481 tcgcgccaga gttgatacag tgggcgaacc tgtgccggga tctcggtact taacgcttca
     9541 atacgcgcga ccagctggcg gcgctcatac ggcgtaattt tggcgtcggc gagcaaaatc
     9601 ccttgtttaa aggtattttg ccagcagccg tcgtcatatt ggcgagcttg ctgacgcgac
     9661 tgcgcaggca ttaaacgatc agcacaatcc atcgcccgca gccagtaaag cggattggtt
     9721 tcggttgatt taccttgcag cgcccagatg tcgctacatt cagtagaaag atagtcagcc
     9781 agttgataaa ccggaatttt ttcttctgct ggcgtatcaa tggctggctt attgtgattc
     9841 tgcacgcaac ccagcaatgc cagacatggc agccctgcca gccacagccg tcggggcaat
     9901 aatcgttgaa aaatgtgtcg catattcacc agacttaaag cctatcccag tgggcgtaat
     9961 tgttgcagac agtctggaca tggacagcgc ggagaaaccg gagcgtacat atcgtacgtg
    10021 aagatttcga gcactgcccg gagccgaact gacaaataaa atagcctgat aggataggct
    10081 gttagcatta tttcgtgttt ttcgacgacg gtaattcaat gcggaaacaa acgtcttgcc
    10141 cgctctcgtc gaccagatac agttcccctt gcatacggcg aatacaatcc ctggcaatgc
    10201 ttaatcccag accgctgccc ttcaccaccc cttttcgctg gtggcttccc tgaaaaaagg
    10261 gttcgaagat catggcgcgt tcctcttgcg gaatgggcgt gcctgtattg atgacatcaa
    10321 tataaacccg cgcaccatgt gaactgctgc gaaggcaaat gttaccggat tcagccccgt
    10381 agtgcaccgc attggagtaa agattatcca gtacgctcat cagcagcatt ggctccgcca
    10441 ggcaagctgt tgctttgaga tcgacgtcgg tatgcatcat tttagcccgt gcgggcaggc
    10501 tatgagcaga aaccactgtc tccaccagcg gtgctaattc aacattctcc agttccaccg
    10561 cactgtccgc ctgtttacgg ttgtaatcaa gcagttgttc gatcagtttt tgcaaattgc
    10621 ggctgctgct atcaagaatg ctcaccacct ctttttgctc tggcgtaagc ggcccgacaa
    10681 cctggtcagc cagtaattca gtgccctcgc gcatactcgc cagtggcgtt tttaattcat
    10741 gagataaatg tcttaaaaat tgatggcgtt gggattccag ccatgacagg cgctcactta
    10801 accaaagaat acgttgccca accgagcgta actcgctcgg tccactgaac gaaacgctat
    10861 tgcccagaga acgcccttcc cccagacggt tgatcatgcg ctcgatattt ttcaccggcc
    10921 cgataatcat ccgcgtgaaa agtagcacca tcaccagact caccagaaat agcaccagcg
    10981 attgccaacc aaaatattgc ccacgttcgg cgatttcacg ctgaagttgc tgcccacgag
    11041 agaacaccac tgtgcgcgtg gcctgcacca tttcggtatt ggcactggca aaggcttcaa
    11101 gacgcgcggc ggcggcagca tcgggaccac tgttgttaca ctgaagttgg gccagattgt
    11161 tcaaatcctg acgcaatgcc tggtaaagtt tatcgtctgg cagtacgcct gcgtgggcat
    11221 cgagcatttc gctgtaacgc ttgcgctggc tttgataaac cttcgcaagc gtagggtcgt
    11281 ccagcacgca atactgacgg tagctacgct ccatctccag cgccgcgttg gtcatcgctt
    11341 cactacgccg ggcatcaata agcgtagtgc ggttaaccag cgccgcctga tcgctaagcg
    11401 cattcaggct ttgccaggct tgccatgcca gcaccaacag gggtagtaga attagcaaaa
    11461 atgccagcat taccagttgt cgtaatgagc ggggaaaaac gggccagcgt ttcaaggtgt
    11521 tactctcgtc agacgcgaat agcctgatgc taaccgaggg gaagttcaga tacaacaaag
    11581 ccgggaatta cccggctttg ttatggaata aggcggtgcc taactcgacg tttcgcccga
    11641 tggttgatat agctacgctg atatcagaag ttggacggca ggcaccttgt tgtgcgtcat
    11701 tcgaatttta tgtagcacgt cccgaagggg ctgacataag tcggtgaatg agccactgct
    11761 tactattatg cagtaactgt gccaataaag aaaatagttt ggtaacgtac tgattatacg
    11821 ttgctttgag ggatttatgg cttcttcgct atttgaatgt aaatcagcca ctgtgtcgct
    11881 aaaaagagac agcttaagat aaacttatta gattacaata aaatcaatca cttaagtgtc
    11941 gccagaaagc gacacggtaa accacccatt gtcgtgattt acagacacaa aaaagctccc
    12001 ggagttggga gcttatgata gtggttggtg cttaatgccg catccgggct gcaaaaccaa
    12061 tgaactgatg aattacccca actgcttacg cgcattgcgg aaaatgcgca tccatgggcc
    12121 atcctcgccc cagttttccg gatgccagga gttgctgaca gtacggaaaa cacgttccgg
    12181 gtgcggcatc ataatggtga ctcgaccact ttcagtcgtg actgccgtaa taccgttcgg
    12241 tgaaccgttc gggttagccg ggtaggtttc agtgactttg ccgaagttat cgacatagcg
    12301 cagtgccacc agccctttgc tttccagtgc cgccagatgc gccgcatcac gcacttccac
    12361 gcgcccttca ccatgagaga cagcaatcgg catttgcgag cccaccatcc cctgcaacaa
    12421 cagagacggg ctttgggtta cttcaaccag gctgaaacgc gcttcaaagc gatcggaggt
    12481 attgcgcaca aaacgtggcc acaactcact acctgggatc agttcgcgca ggttagacat
    12541 catctggcaa ccgttacata cccccagcgc cagcgtttgc ggacggtgga agaaggttgc
    12601 aaactcatcg cgtacacggt cattgaacag gattgacttc gcccaacctt caccggcacc
    12661 cagcacatca ccgtaggaga aaccaccgca cgcgaccagg gcgtggaaat cttccaggcc
    12721 cgtgcgtccg gtcagcaggt cactcatatg cacgtcgata gcatcaaagc ctgcacggtg
    12781 gaaagctgcc gccatttcaa catgcgagtt cacgccctgc tcacgcagta cggcaacttt
    12841 cggacgtgcg ccagtggcaa tatacggtgc tgccacatct tcgttgatat cgaacgacag
    12901 ttttacattc aggcccggat cggcgtcgtt agatttcgcc tgatgctcct gatcggcaca
    12961 ctccgggttg tcacgcaggc gctgcatctg ccaggtagtt tctgcccacc agacacgcaa
    13021 cgtggtgcgg ctttcgctga atacagtctg cccgttggcg gtaatcacaa aacggtcacc
    13081 ggaaaccgcc tgccctacat aatggacaca atcagcaagc ccatgctgtg ccagtacgga
    13141 ctcgaccgct tcacggtcag cggcacgaac ctgaatcacc gcacccagtt cttcgttaaa
    13201 caacgccgcc aggcgatcgt cgcccagaga ggcaatatcc gcgttaatgc cgcaatgacc
    13261 agcaaaggcc atttccgcca gcgttaccag caggccgcca tcagagcggt cgtggtatgc
    13321 gagcagctta cgctgtgcaa ccagcgcctg aatcgcgtca tagaagcctt tcagttgcgc
    13381 gacgtcgcgt acatctgccg gtttgtcgcc aagctgacga taaacctgcg ccagcgccgt
    13441 tgcgcccagc gcgttattgc ctttgcccaa atcaatcagc aatagtgcgt tatcttcggt
    13501 agaaagctgt ggcgtgatgg tgtgacgcac atcttccacg cgggcaaatg cagaaatcac
    13561 cagcgacagc ggcgacgtca tttcgcgctc ttcgttacct tcctgccagc gggttttcat
    13621 cgacatagag tctttaccca ccgggatcgt caggcccagc gccggacaaa gctcttcgcc
    13681 cacggcttta acggcttcat acaggcccgc atcttcacca gggtggcctg ccgccgccat
    13741 ccagttggcg gaaagtttaa tgcgtttgat atcgccaatc tgtgttgcgg caatattggt
    13801 taacgcttca ccgaccgcca gacgggcaga ggcggcgaaa tccagcagcg caaccggcgc
    13861 acgctcgcca atcgccatcg cttcaccgta gtagctgtcg aggctggcgg tagtgaccgc
    13921 gcagttagcg accggcacct gccacggacc caccatctga tcgcgcgcta ccatgccagt
    13981 tacgctgcgg tcaccgatgg tcaccaggaa agttttctcc gccacggtcg gcagatgcag
    14041 tatgcgtttc accgcgtctg caatggtgat cccttcacgg accagcgcat cgcccttcgc
    14101 tttcagcgtt tgtacatcgc gggtcatctt cggcgtttta ccaagcagga cgtccagcgg
    14161 cagatcgatc ggctgattat caaaatgacg atcgtgtaga gaaagatgca gttcttcggt
    14221 cgcttcacca atcaccgcgt agggtgcgcg ctcacgctta cacagttcgt caaacagcgg
    14281 taattgatcg gcagcaaccg ccagcacgta gcgttcctgg gattcgttac accagatttc
    14341 cagcgggctc atgcctggct cgtcgctcag aatgtcgcgc agttcaaatt taccgccacg
    14401 cccgccgtcg ctcaccagtt ccggcatagc gttagaaaga ccgcctgcgc caacgtcgtg
    14461 gataaacagt attgggttgg catcaccaag ctgccagcaa cggtcaatca cttcctggca
    14521 gcgacgctcc atctccgggt tgtcgcgctg tacggaagca aagtcgaggt cggcatcaga
    14581 ctgaccagac gccatggaag acgccgcgcc gccgccaaga ccgatgttca ttgccgggcc
    14641 gccgagaacg accagcttcg cgccaacgtt gatctcgcct ttttgtacgt gatcggcgcg
    14701 aatgttgccg atcccgcccg ccagcatgat cggtttgtga taaccgcgca gctcttcgcc
    14761 gttgtggctg ttcacttttt cttcataagt acggaagtag ccgttcagtg ccggacgacc
    14821 aaattcgttg ttaaacgccg caccgcccag cgggccttcg gtcatgatgt ccagcgcggt
    14881 gacaatgcgc tcaggcttac cgaaatcttc ttcccacggc tgttcgaagc caagaattcg
    14941 caggttggaa acggagaaac caaccaaacc cgctttcggc ttcgcgccgc gcccggtggc
    15001 accttcatcg cggatttcac cgccggaacc ggtcgccgcg cccggccacg gagaaatcgc
    15061 cgtcgggtgg ttgtgagttt cgactttcat cagaatatgc gccggttcct gatggaaatc
    15121 atagcggccc gtttcgtggt cagcaaagta gcggcccact tcagaacctt ccattacggc
    15181 ggcgttatct ttataagcag agagaacgtg atctggcgtg gtttcgaaag tatttttgat
    15241 catcctgaac agcgatttcg gctgttgttc accgtcgata atccagtcgg cgttaaaaat
    15301 tttgtggcgg cagtgctcag agttcgcctg agcgaacata tacagctcga tgtcgttcgg
    15361 gttacgacca agctttgtga aagcatcctg cagatagtca atttcatctt ccgccagagc
    15421 caggccaaga cgcaggttag cgtcgatcag cgcctgacgg ccctgcccca gcaaatcaac
    15481 gcttgtgacc ggagtcggtt gatggtgggc aaacaactgc tctgcatcat ctaaatcaaa
    15541 aaagacagtt tccatcatgc ggtcgtgcag ttcagcggta acctgctgcc attgttcatt
    15601 ggtcagcgta ccggcttcta tatagtaagc aacgccgcgc tcaaggcggt ttacctgttg
    15661 tagcccgcag ttatgggcaa tatcggtcgc tttcgaagac cagggagaga tggtgccagg
    15721 acgcggggtc accagcagga gtttgccttg cggggcgtgg ctggcgagtg ccggaccata
    15781 tttcagcagg cgttcaagtt gtgcgtgctc atcatcgttt aacggcgcat tgaggtcagc
    15841 aaaatggaca tactcggcgt aaatattgtg aaccgggagc ctggcagcct gaaaacgtgc
    15901 cagcagtttg ttgattcgga atgccgacag tgcaggcgaa ccacgcagaa tttccatcat
    15961 aagtctctcg tcttctaagc tttcggtgta cccaaggggg ggggaaacgg gcgtcattat
    16021 aaagaatctg atgcgctgac gaaaccgttt gcgtggaaat aaaatcacca tcgtgaatta
    16081 gcaacgcgtg ccgccaatgg ctgtaataag ttgccatctg gcgcaggttt acgcaaaatg
    16141 ccgctcattt atgagtaaac ctttcactat tattacgttt tttcaagctg ggacgcgcac
    16201 gacacagaga attaactaat tgaaaaaatt aaagattaat tatctgttca tcggcattct
    16261 ggcactgctg ctcgcggtcg ctctctggcc atccattccc tggtttggta aagccgacaa
    16321 ccgtatcgcc gccattcaag cgcggggaga gttgcgtgtg agcaccattc atactcccct
    16381 gacttataac gaaatcaacg ggaaaccttt tggcctggat tacgaactgg cgaaacagtt
    16441 tgccgattac ctcggcgtaa aactgaaagt gaccgtgcgg cagaatatca gccagctgtt
    16501 tgacgacctt gataatggta acgccgacct gctggcggca ggactggtct ataacagtga
    16561 gcgggtaaaa aattatcagc ctggccctac ctattattcc gtgtcacaac aactggttta
    16621 taaagtgggt cagtatcgcc cacgtacgct gtgcaacctg acggcggagc aactcaccgt
    16681 tgcaccgggt catgtggtgg ttaacgatct ccagaccctg aaagaaacaa aattcccgga
    16741 attaagctgg aaggtagacg acaaaaaagg ctctgcggaa ttaatggaag atgtcatcga
    16801 aggaaaactc gattacacca ttgctgattc tgtcgccatc agcctgtttc agcgcgttca
    16861 cccggagctc gccgtagcgc tcgatatcac cgatgaacaa ccggtgactt ggtttagccc
    16921 gttagatggc gataataccc tttccgccgc cctgctcgac ttcttcaacg aaatgaatga
    16981 agacggtacg ctggcacgca ttgaagagaa atacctgggg catggcgatg attttgatta
    17041 cgtcgatacg cgcacatttt tacgcgccgt cgatgcggta ctgccgcagt taaagcccct
    17101 gtttgagaaa tacgccgaag aaattgactg gcgtttgctg gccgctattg cttatcagga
    17161 atcgcactgg gatgcacagg ccacttcacc gacgggtgtg cgcggcatga tgatgttaac
    17221 caaaaatacc gcgcaaagcc tcggcattac ggatcgtacc gatgccgaac agagcatcag
    17281 cggtggcgtg cgttatttgc aggatatgat gagtaaagtg ccggaaagtg tgccggagaa
    17341 cgagcggatc tggtttgccc tcgctgcgta caatatgggc tatgcgcata tgctggatgc
    17401 ccgcgccctg acggcaaaaa ccaaagggaa tcctgacagt tgggctgacg taaaacagcg
    17461 tctgccttta cttagccaga aaccctatta cagcaagctg acttacggct acgctcgtgg
    17521 acatgaagcc tacgcttatg tcgaaaatat tcgtaagtat caaattagcc tggtgggtta
    17581 tctgcaagag aaagagaagc aggctacaga agcggcgatg caactggcgc aggattatcc
    17641 ggcggtatcg cctacggagt tgggcaaaga gaaatttcct tttctctcgt ttctttccca
    17701 gtcgtcatca aactatttga cccattctcc ctctctgctg ttttccagga aagggagtga
    17761 agagaaacaa aattaatccg tcgaggattg cgcttttttc tgcgctttaa tttcctggcg
    17821 gcgcatgcga aagaagtcac tgagcaacgc cgcgcactca tccgccagta ttccttccgt
    17881 aatttccact cggtgattca tacccggatg atgcagcaca tccattaaag atcccgcagc
    17941 gccagttttc gcgtcacgcg caccaaagac cacgcgacca atgcgactgt ggatcatcgc
    18001 tccggcacac attacacatg gttcaagcgt gacatacaac gtggcgtcga tcagacgata
    18061 attttgcatc accagaccac cctgccgcag ggccatgatt tctgcatgtg cggtgggatc
    18121 atggcgacca atcgggcggt tccaaccttc gccgattacc cgattgttat gcactaatac
    18181 cgcgccgacc ggcacttccc gctcatccca ggcacgtttc gccagcgtca gcgcgtgacg
    18241 catccagtat tcgtggctaa attcgacttc agacaaaaag aaaactccgg ttataaaagc
    18301 gcggcgcatt atacacggac gctatgcttt actctattcc agttgctgga gttcaccgcg
    18361 cggggttact cgccaacgat gctgacagaa ataaagcagc ggattgtcct gattactgtc
    18421 gctatagcca ctgtacagcc gcagcggagt gccgattttg cgctccagtt gtgcgacctt
    18481 ttcatgtccc agacaacgca tcgtcaatac ccaaccacca tagccacgct gaatttggct
    18541 ggcgataaga ttaacccgcg gcagccaggg cttatcgaaa taaaccgctt caaccagcgg
    18601 ctgcggagag ccggtaatca accagatatc agcatcggaa cttaacaggt aggtggttaa
    18661 tcgctcctga accagcggaa aggcggtaac attgtcgcga aaccagcgca cgaaatcggc
    18721 ctgcaacgtc tgtaaacgtg cttcgctgtg accaaaagtg cacccccaca gaagcagact
    18781 catcggccag cgtgccgcac gaccttttat caataacgca atggctataa tcggtaacaa
    18841 cggcaggaca agtaacgcat tcagcggttg gcgacgtagt aaatagcgca gaaaactgcc
    18901 gaacatatcc tgctgatgca atgttccatc taagtcaaaa aacaccacac gacgctcgtg
    18961 agttgccaaa ccatactcct ctggactgaa acatcctgat taattttcgc tactacatag
    19021 cctaacagat agatcatcac ttttccggca acaatcgacc gcatcatggc taactggaat
    19081 ttttaattca tggcaattag cggcaatgga atataaaatt cactcgcgtg tgtctcatat
    19141 tgcctgttgt cgccactatt tcatcgcgag gaaagatatg aacggcttac ttcgtatccg
    19201 tcagcgttac caggggcttg cccagagtga taaaaaactg gcggattatc tgctgctaca
    19261 acctgatacg gcgcgccatt taagctctca gcaactggcc aacgaagccg gagtcagtca
    19321 gtccagcgtc gtgaagttcg cgcaaaaact cggctataaa ggttttccgg cgcttaagtt
    19381 ggcgttgagt gaagcgctgg caagccagcc ggaatcgccc tccgtgccca ttcataacca
    19441 aatccgcggt gatgatccgt tacggctggt cggcgaaaaa ctgattaaag aaaatactgc
    19501 cgctatgtac gcaacgctaa acgttaatag tgaagagaaa ctgcatgaat gcgtaacaat
    19561 gttgcgctct gcgcggcgga taattctgac cggtattggc gcttcgggtc tggtggcgca
    19621 aaactttgcc tggaagctga tgaagattgg cttcaatgct gccgcagtgc gcgatatgca
    19681 tgcgctactc gcaacagtac aggcgtcgtc ccctgacgat ctgttattag ccatttccta
    19741 caccggtgta cgacgcgagt taaacctggc ggcagatgag atgctgcgag tgggcggaaa
    19801 agtgctggcg attaccggct ttactccgaa tgccctgcaa cagcgtgctt ctcattgcct
    19861 gtataccatt gccgaagaac aagcgacaaa cagtgcttca atctctgctt gtcacgctca
    19921 gggaatgtta acggatttgc tgttcattgc gctgattcag caggatctgg aactggcacc
    19981 agaacgtatt cgtcatagtg aagcgctggt gaaaaaactg gtctgagtaa agaatgcgcg
    20041 tataatgccc gcccggtttg tgttgttttg agagtttcct tatggcgttg ttaatcacta
    20101 aaaaatgcat caattgtgat atgtgtgaac ccgaatgccc gaatgaggcg atttcaatgg
    20161 gagatcatat ctacgagatt aacagcgata agtgtaccga atgcgtaggg cactacgaga
    20221 caccaacctg ccagaaggtg tgcccgatcc ccaatactat tgtgaaagat ccggcgcatg
    20281 tcgagacaga agaacagttg tgggataaat ttgtgctgat gcaccacgcg gataaaattt
    20341 aatattctac tctggaagta gagtattaat tatattactg ggaagcctta acgccattat
    20401 atttatttaa ttgatgacat tagcataatc attcactaag ttaatttata tagtatctgc
    20461 caagacactt atttatagtt attaaaggcg cgtccgattg gttcaccgga cgcaccttaa
    20521 gtacgtttcc ttgtgttata agaacagaag gatcagctgt aaaacagcaa tgatgatttt
    20581 gatgacccgt ttaatcaggt atcggcaatc agtcattcgt ttttccttaa acaaggaatg
    20641 cagccgttca gattagccct tacatctccc caaaactgaa cgtgcgagtt attgagggtg
    20701 catgctgcac tccacaccag agctttgacg acaccactcg tttcaatggg ggaattctgt
    20761 ggcatggtgt aaagcacagc aaaatcttca ataacgaagc caattttaat gtacttacga
    20821 attggcggtc acgttaatct ttccatcaat attgctttct tcgtaaaggc tcgagttttt
    20881 atgctaaaga ttgcaagttg cttgtaaaag ataagtacac tgatccataa tcgctgttgt
    20941 tgagggtgca tgctgcacaa aattaaagtt aaaaagtaaa acccccgttc cttaccagtt
    21001 cgggggtttt actttttaaa gagaacggta ttattttaac tttcaataat taccgtggca
    21061 caagcatagt ggcgttcatc tgccagcgtt acatgcatat ttacaacgcc gagcttttcc
    21121 gccagtttta atgcctcacc ccatagccgt agccgtggtt tgccgagctc atcattgaat
    21181 acttcaaatt gattaaacgc cagaccattg cggatcccgg tgccaaacgc ttttgctgcg
    21241 gcttctttca cagcaaaacg cttcgccaga aaacgcaccg gctggtggtg cgttttccag
    21301 attgcccatt cgttatcgct taatacgcgg cgtgccaggc gctcaccgga tcgggcgatc
    21361 actgcttcta tgcgagcgat ctctacgata tccgtgccta aacctaatat tgccattagc
    21421 cacgcgcttc cagcatcaga cgcttcattt ctgccaccgc atctttcagt ccggtcatca
    21481 ctgcacggcc aataatggca tgaccgatat tcagttcatg catctcaggg atggcggcaa
    21541 tggctttcac gttgtgatag gtcagaccgt gtccggcgtt aactttcaga ccgagactag
    21601 cggcaaaggt cgcggctttg gcgatacgca ccagctcttg cgcctgttcg gcgtcagttt
    21661 tggcatcagc atagcaaccg gtgtggatct cgataaacgg tgcgccaacc tctgccgcag
    21721 ctttgatctg ctcttcatcg gcgtcgataa agagagaaac ctgaatcccg gcatctgtca
    21781 gacgtttgca ggcatcgcgc attttttcac gctgccctgc aacgtccagg ccgccttcgg
    21841 ttgttacttc ctgacgcttt tccggtacca ggcagcaaaa atgtggcttc gtctcaacgg
    21901 cgatcgccag catctcttcg gtcactgcca tctccagatt cattcgggta tccagcgtct
    21961 gccgcaggat gcgcacatcg cggtcagtaa tgtggcggcg atcttcacgt aaatgcacgg
    22021 taatgccgtc cgctcccgcc tgctcggcaa taaacgccgc ctgcaccgga tccgggtaag
    22081 cagtaccgcg tgcgttacgc agcgttgcaa tatggtcaat gttgacgcct aacagtaatt
    22141 cagccatgac aatcctcatc attcataatg tgttttcacc gttcgcttag gcataaactg
    22201 ccggaacagt tccctgctct ttaatggttt accgccaaga tacggcttaa gcgccatgcg
    22261 ggtaaagcgt ttcgcggcgc gtagtgtgtc tgcgtcagga aattcccgcg cgtttaacgc
    22321 ttttaactgc cttccggtga acgttttatt gtcgataacg acgcttgcga taaacccttt
    22381 ttcttcgcga taacgatacg tcatggtgtc atctaccggc tcgccgctac ccgcgcaata
    22441 ggtaaaattg acgccatagc ccagatgccc gagcagtgcc agttcaaagc ggcgcagcgc
    22501 gggttctggc gtaccagtgg cacctgcaag agactgaatg cagtgcaaat aatcgaaaaa
    22561 gagttcagag aagcgcgtct cgtattccag tacgcgggag agaagttcgt tgatgtacag
    22621 accgctgtaa agcgtgatac cgcttaatgg cagcgccagc gagacagctt cagcactgcg
    22681 cagcgttttg acttcgccac gcccgccgaa acgtagcaag agaggggtga aaggctgtaa
    22741 tgcacctttc agagtagagc gtttagagcg tgcgcctttg gcaaccagac gcacgcgacc
    22801 cgattcctcc gtgaagacgt ccagcatcag gctggtttcg ctccacgggc gactatgcag
    22861 gacaaatgcg cgctgccagc cttccatcgg agtgactctt aaagatcgtc aacgtaaccg
    22921 agactgcgca gtgcgcgttc gtcgtcggcc caaccggatt tcacttttac ccacagttca
    22981 aggtggacag gcgcttcgaa catttcctgc atgtctttac gcgcttcaat cccgatggtt
    23041 ttgatcttgg cccctttgtt gccaataacc atcttcttct gcccttcacg ctcaacgaga
    23101 atcaaaccat tgatgtcata accaccgcgt tcgttagaga cgaaacgttc gatctccacg
    23161 gtcacggagt acggcagttc agcgccgagg aaacgcatca gtttttcgcg gatgatttca
    23221 gacgccataa aacgctgtga gcgatcggtg atgtaatctt ccgggaagtg atgggtcgct
    23281 tcaggcagat gcttacgcac gattgctgcg atagtgtcga cattcagccc ggtttcagca
    23341 gagatcggca cgatatcgag gaagttcatc tgacttgcca ggaactgtaa gtgcggcagc
    23401 agatcggctt tttcctgcac gttatccact ttgttcaccg cgaggatcac cggcgctttg
    23461 ccatcgcgca gtttgttgag caccatttcg tcgtccggcg tccagcgggt gccttcaacg
    23521 acaaaaatca ccagctcaac gtcgccaata gagctgctcg ccgctttgtt catcaggcgg
    23581 ttaatagcgc gtttttcttc catatgcagg ccaggggtat caacgtagat cgcctgatac
    23641 gcgccttcag tatggatccc cacaatgcgg tgacgagttg tttgcgcttt gcgggaggtg
    23701 atggagatct tctgccccag cagtttgttc aacaatgtgg atttgccaac gttcggacgt
    23761 ccgacgatgg caataaatcc gcagtaactt ttatcgatgc tcattccagc tccagttttt
    23821 tcaacgcctg ttcggcggca gcctgctcag ccttacgacg gcttgaacct gtgccaacca
    23881 ccggttcact caggccgctg acctggcagt ggatagtaaa ttcctgatcg tgcgcttcgc
    23941 cacgtacctg gactaccaga taagtcggca gcggcagatg gcgaccctgc aaatattctt
    24001 gcaagcgcgt tttcggatct ttttgtttat cgcctgggct aatttcgtcc aaacgagttt
    24061 gataccagtt gaggattaat ttctcgacgg tttgaatatc actgtcgagg aatacgccac
    24121 caattaatgc ttcgacggta tcggcgagaa ttgactcacg acgaaatcca ccgcttttaa
    24181 gttcaccagg ccctaaacgt aagcactcgc ctaactcaaa ttcgcgcgcc agttccgcca
    24241 gcgtattgcc acggaccagc gtggcgcgca tccggctcat atcgccttca tccacacgag
    24301 ggaaacggtg ataaagcgca ttggcgataa cgtagctcag aatagagtcg cctaaaaatt
    24361 ctaaacgctc gttatgtttg ctgctggcac tacgatgagt taatgcctgc tgcaacagtt
    24421 cctgatgatt aaaagtgtag cccagcttcc gttgaagccg attaattacg atggggttca
    24481 tgcgatacca ataaataaat gcgtcaacaa ttcagcacac gaaacagacc tgatatacat
    24541 ggctctgcta actgcttcgc tgcagtttca gtttaccggt atatggggac caacgctgtt
    24601 tcgtgtgccg tggcaacctg gaggtgccaa ccttaaactt cgggggaata ttctatacac
    24661 aacgacgggg gatgtcgtta gccacgggag atttatctca taaataattc acgttgtcgc
    24721 cataacggcg acaacgtgaa cgaagatggg ctattaatgg atgccgccaa tgcgacttaa
    24781 gcgcacacct gtcggccatt cgccttcttg cttatcgaaa ctcatccaga tagccgttgc
    24841 ccgaccgacc agattcgctt caggcacaaa accccagtaa cggctgtccg cgctgttgtc
    24901 gcggttgtcg cccatcatga agtattgtcc cggcggaaca atccaggttg ccagttgttg
    24961 ccctggctgt tggtaataca tccccacctg gtcctgcgca atcggcactg tcagaattcg
    25021 gtgcgtcaca tcacccagtg tctctttacg ctcggaaaga cgaattccat tttctttggt
    25081 ttcgtttttc ggcacttcaa agaatccgct ggtcgcttcc ccaccattac ggcgtgagaa
    25141 ggtctgaacg aaatcgctcg gttccacgtt ggagtaggtg accggtagcg cgttttcaca
    25201 cgcctggccg gaactgcatc ccggttgaat cgtcagctct tttgagaccg gatcgtaagt
    25261 gactttatcg cccggtaaac ccaccgcgcg cttgatgtaa tcaagctttg gatcttccgg
    25321 atatttaaag accacgatat cgccgcgttt cggatgaccg gtttcgatca gcgttttctg
    25381 gtagatagga tctttaatgc cataagcaaa cttctctacc agaataaaat caccgattaa
    25441 cagagtcggc atcatcgaac ctgacgggat ctggaacggt tcataaataa acgaacgtac
    25501 aatcaatacg atagccagca ccggaaaaac agaagcaccg gtttccagcc agccaggctt
    25561 cggcgcaacc tttttcaggg ttgctttatc cagtgagtca ccggcagccg cctgcgccgc
    25621 tgcctgacgt tcccgccgtt taggtgcgaa aaagaattta tccacgcacc ataaaatgcc
    25681 cgtcaccagt gtggcaatca ccagaatcag ggcaaacata ttcgccatgc caactcctaa
    25741 gggttatttg ttgtctttgc cgacgtgcag aatggcgagg aacgcttcct gcggcagctc
    25801 gacgttaccg atctgcttca tgcgtttctt accttctttc tgcttctgca gcagcttttt
    25861 cttacggctg atatcgccgc cataacattt agccagtacg tttttacgca gctgtttcac
    25921 ggtggatcgc gcaataatgt gcgtaccaat cgctgcctga atggcgatat caaactgctg
    25981 gcgtgggatc agatctttca tcttctccac caactcgcga ccgcggtttt gcgaattatc
    26041 acggtgggtg atcagcgcca acgcatcaac acgttcaccg ttgattaata cgtctacacg
    26101 taccatgtcg gacgcctgga agcgtttgaa gttgtaatcc agagacgcat aaccacgcga
    26161 ggtagatttc aggcgatcga agaagtcgag caccacttcc gccatcggga tctcgtacgt
    26221 cagcgccacc tgattaccgt ggtaaaccat attggtctgc acgccgcgtt tttctacgca
    26281 cagcgtaata acgttgccga gatatgcctg cggcagcagc atgtgacact ctgcaatcgg
    26341 ctcgcgcagt tcgtaaatgt tatttaccgc aggcagcttg gatgggctgt cgacgtagat
    26401 aacttccctt gacgtggttt caacttcata cactacggtc ggcgcagtgg tgatcagatc
    26461 cagatcgtat tcacgttcca gacgttcctg gatgatctcc atgtgcagca ggccaaggaa
    26521 gccgcagcgg aaaccaaagc ccagcgcgct ggagctttcc ggctcataga acagtgaggc
    26581 atcattcagg ctgagtttac ccagcgcgtc acggaaggct tcatagtcgt cggaacttac
    26641 cgggaacaga ccggcgtata cctgcggttt gactttctta aagccaggca gcgccttttc
    26701 tgccggatta cgcgccagcg ttaaggtatc gccgactgga gcgccgtgga tatctttaat
    26761 cgcacatacc agccagccta cttcgccaca tttcagttca gtgcggtcaa cctgtttcgg
    26821 cgtgaagatg cccagacggt cggcgttata ggtctgcccg gtactcatga ctttcacttt
    26881 gtcgccctta cgcagggtgc cgtttttaat acggataagt gaaacaacgc ccaggtagtt
    26941 gtcgaaccat gagtcgataa ttagtgcctg caacgggcct tccggatcgc cttccggcgg
    27001 cggaatgtcg cgcaccagac gttcgagaac gtcctgcacg ccaacgccgg ttttcgctga
    27061 acagcgcacc gcgtcagtgg cgtcgatgcc gacgatatct tcaatttctt ccgccacgcg
    27121 ttcaggatcg gctgccggca ggtcaatctt gttcagtact ggcaccactt cgagatccat
    27181 ttccatggcg gtgtagcagt ttgccagggt ttgcgcttcc acgccctgcc cggcgtcgac
    27241 caccagcaat gcaccttcac aggcagccag cgaacgggaa acttcatagg agaagtctac
    27301 gtggcccggg gtgtcgataa agttaagctg ataggtttcg ccgtcagacg ctttgtagtc
    27361 cagcgtcacg ctttgcgctt tgatggtaat gccacgctca cgctcaagat ccatggaatc
    27421 gagaacctgc gcctccattt cacggtcaga caggccaccg cagatctgga taatacggtc
    27481 agacagcgtc gatttaccgt ggtcaatgtg agctatgatc gaaaagttac gtatattctt
    27541 cataaagtat gattattgtg ccttaatgcc cggttaacca ggcttttaga agtcgctgtt
    27601 ctgagcttaa cgtctgtatt aatagaaacg ccgcattcta cactacaaca ttgaggcgag
    27661 gaaatgttca taccgtatgg attgtggtat ctggaaacgt cctcgcattt gttatgcaaa
    27721 atgcaacaaa gccagtgaaa tcactggctc gcgtcttccg aagatgtttc aaatcgcaca
    27781 aggccaggcg gcaatgccac gcttaagatg atcggttgcc attctgcccg ggcagcaaac
    27841 ttacgcgagt agccgcgcgc aatcaggaac ccgccaatac cgccgaggac cgcaccacat
    27901 aatgctgcga cgtcagaagc aaagagtagc tgaaatagcg aagcgatgag gaataatccc
    27961 accagcggcg acatataaac cagtaatgcg gagctaagca ggctgccttc ggcgatcccc
    28021 aattccactt tttgccccgg cactaacggt tcatcacagg gtacgacaat ggtatgcgtg
    28081 gtttgcgggc caagtttatt caacacgcgg ctaccgcaac cggcgcgtga agcgcagctg
    28141 ctgcatgaag ctttaacatc acaactgacc agcgcctgcc cgttttgcca ggagacgacg
    28201 gtagcccact ctttgatcat tgcgctgccc cgaacttaat attctcggca atgcgtttcg
    28261 ccgtttgcgg cggcagttca ccgacaatgg tgatttcggc gttatcacgt acgcttgtac
    28321 tgacggttct gcgtccggtg cgcaacatct gatcggtgct cgatggcgta gcgcgattaa
    28381 cgtttaccga gaagctgaat aatccgtcag aatagagacg tgattcgata ggcatgttgt
    28441 ccatcgtcgg tagcggacgt cgactactgg aaacttcgct aaaaccctgt ggcaaccagg
    28501 ttggcgtcca gctgaattta gctttttcac ctacaggaac agaaagcaac ggcggcaaat
    28561 ttgccttcgc cagcgtctgc atactgctgc tgatatcctg attgacgtta aaagcaatca
    28621 cgcgaaattg ttccagcgtt tcaccatcgc gatcaaggag atcaacccgc atcggtaatt
    28681 tcgattcggt gtccatccac acgatgtagc tgtagcgtgt accatctcgg gcaaccacgc
    28741 gaatgacttc gcaaagacga tcagcaatac gcgtgcgccc gacggagata aagtcgtagt
    28801 aaggagaaag gcgtttgaaa tcggtataga tgagcgatgg cagagaatca acaatgtaat
    28861 cgccattaag cgtgaacggt tcaagtcccg gttcaaaata gctgatttca tcgccgcgct
    28921 gtaccacttc ccggcgcggg ccatccattt gcaacaattg tgcaagagga cggttatcga
    28981 ggcgtgcatg tcgataacgc agagactcaa caccctgttt attgatgctg atgaatgaca
    29041 gctcgtaatt cagtgactga ctggccaggt tcatctgctg taataacgcc ccggacgcgg
    29101 gagtggccga ggcgttagca gagaataaca ggctacctgt cactaatgac atggcaaacc
    29161 aaagttgctt cattactgcg attgcgttcc taaagtttga attcctggca cctgtacagc
    29221 ggcttgctgg gtttgcgcct gctcaaactg aagctgttca gagtggagtc ggcgttgcag
    29281 ttcgtaatcc tgcaacattg cattaatgcg acgacgctgc tcctgtacct gctgctgttg
    29341 accattgttt gcggtcgctt cagaaggtac tcccaggctt accgggctgg ctttacccat
    29401 catcggcagt gtattaaata ccggcgtttc gggctgctgg gacgtttcag attgtccatt
    29461 atagtgctgg acgccaacga taactgcaag cgatacgcat gctgctacgc ccatttgggt
    29521 aagctgtgcc gcccacggac gtactttctg ccagaatggc attttctgcc attgatgcgg
    29581 cgcaggctgg gcttccggga tcaatgtcgc cggttgacgt actggctctt cttcaatggc
    29641 ggccatcacg cgtgaagaga tatcgaaatg gagcacctcg ggagtatcac cccgcattga
    29701 gtcacggatt aagtgatagc tttcccaggt tttctgcatt tctgggttat gagccagttc
    29761 gttaagcagc tcactatcca gcgtttcgcc atccattaaa gcggaaagtt gttctttctg
    29821 catgcctaat acccttatcc agtatcccgc tatcgtcaac gcctgataag cggttgaact
    29881 ttgttatcaa tagcttccct cgctcggaag atacgtgaac gcaccgtacc taccggacaa
    29941 tccatgatag cggctatctc ttcatagctc aggccatcca gctcccgcaa ggttattgcc
    30001 atgcgcaaat cttccgggag ggactcaata gttcggaaaa ctatctgtct cagttcttct
    30061 gacaacatta agttctcagg gttcgaaatt tctttcaacg cgccgccact ttcgaagttt
    30121 tcagcttcaa tggcatccac atcactggaa ggtggacgac gcccctgagc aaccaggtaa
    30181 tttttcgctg tatttacagc aatccgatac agccatgtat aaaaagcgct atctccccgg
    30241 aacgaatcca gcgcacgata ggctttaata aaagcttctt gtaccacatc gggaacatca
    30301 cccgacggca catagcggga aaccagactc gccactttat gctgatagcg cactaccagt
    30361 aagttaaagg ctttctgatc tcccttctgg acccgttcaa ccaggacctg gtccgttaac
    30421 tgctcgctca tccgaggtaa agtctcccca aaccaaattt ccacgcgcta tcgaaacgcc
    30481 actccattag ctgcaatttg agcaagcaaa gggttagagt gtctcgtttt tgtaaagttc
    30541 cgtaacgcat ctgtttttgt ttgtcatgct gtagacggat cattatctat cattataagt
    30601 ctacagaatc tgaacatcgc attatctgtg tagaaatgcc catttaactg cctgaagagt
    30661 aacccaacgg cctttttatt tcaccaccta atcctccacc agccagtaac ttctcttttt
    30721 ctcgccgccc tgcatcagcg tgtttagcaa ctgtaacaaa tattaaaata gcaggtgttt
    30781 attcgcacaa catgatgcta tgctgaccaa accgtgttta gtaaattaaa caaagaaaat
    30841 gaatactctc cctgaacatt catgtgacgt gttgattatt ggtagcggcg cagccggact
    30901 ttcactggcg ctacgcctgg ctgaccagca tcaggtcatc gttctaagta aaggcccggt
    30961 aacggaaggt tcaacatttt atgcccaggg cggtattgcc gccgtgtttg atgaaactga
    31021 cagcattgac tcgcatgtgg aagacacatt gattgccggg gctggtattt gcgatcgcca
    31081 tgcagttgaa tttgtcgcca gcaatgctcg ttcctgtgtg caatggttaa ttgaccaggg
    31141 ggttttgttt gatacccacg ttcaaccgaa tggcgaagaa agctaccatc tgacccgtga
    31201 aggaggacat agtcaccgtc gtattcttca tgccgccgac gccaccggta gagaagtaca
    31261 atccacgctg gtgagcaagg cgcagaacca tccgaatatt cgtgtgctgg agcgcagcaa
    31321 cgcagttgat ctgattgtct ctgacaaaat tggcctgccg ggcacgcgac g
//
LOCUS       DADMJE010000032        30870 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.033, whole genome shotgun sequence.
ACCESSION   DADMJE010000032 DADMJE010000000
VERSION     DADMJE010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30870
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.033"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            248..631
                     /gene="secE"
                     /locus_tag="JN001_001309"
     CDS             248..631
                     /gene="secE"
                     /locus_tag="JN001_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007665874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HAY9052601.1"
                     /translation="MSANTEAQGSGRGLEAMKWVVVVALLLVAIVGNYLYRDIMLPLR
                     ALAVVILIAAAGGVALLTTKGKATVAFAREARTEVRKVIWPTRQETLHTTLIVAAVTA
                     VMSLILWGLDGILVRLVSFITGLRF"
     gene            633..1178
                     /gene="nusG"
                     /locus_tag="JN001_001310"
     CDS             633..1178
                     /gene="nusG"
                     /locus_tag="JN001_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005280494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HAY9052602.1"
                     /translation="MSEAPKKRWYVVQAFSGFEGRVATSLREHIKLHNMEDLFGEVMV
                     PTEEVVEIRGGQRRKSERKFFPGYVLVQMVMNDASWHLVRSVPRVMGFIGGTSDRPAP
                     ISDKEVDAIMNRLQQVGDKPRPKTLFEPGEMVRVNDGPFADFNGVVEEVDYEKSRLKV
                     SVSIFGRATPVELDFSQVEKA"
     gene            1338..1766
                     /gene="rplK"
                     /locus_tag="JN001_001311"
     CDS             1338..1766
                     /gene="rplK"
                     /locus_tag="JN001_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006121495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HAY9052603.1"
                     /translation="MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNA
                     KTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLLKKAAGIKSGAGKPNKDKVGKIS
                     RAQLQEIAQTKAADMTGADIEAMTRSIEGTARSMGLVVED"
     gene            1770..2474
                     /gene="rplA"
                     /locus_tag="JN001_001312"
     CDS             1770..2474
                     /gene="rplA"
                     /locus_tag="JN001_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HAY9052604.1"
                     /translation="MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDV
                     AVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAD
                     QIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ
                     VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTM
                     GAGVAVDQAGLSASVN"
     gene            2887..3384
                     /gene="rplJ"
                     /locus_tag="JN001_001313"
     CDS             2887..3384
                     /gene="rplJ"
                     /locus_tag="JN001_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002438625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HAY9052605.1"
                     /translation="MALNLQDKQAIVAEVSEVAKGALSAVVADSRGVTVDKMTELRKA
                     GREAGVYMRVVRNTLLRRAVEGTPFECLKDAFVGPTLIAYSMEHPGAAARLFKEFAKA
                     NAKFEVKAAAFEGELIPASQIDRLATLPTYEEAIARLMATMKEASAGKLVRTLAAVRD
                     AKEAA"
     gene            3451..3816
                     /gene="rplL"
                     /locus_tag="JN001_001314"
     CDS             3451..3816
                     /gene="rplL"
                     /locus_tag="JN001_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HAY9052606.1"
                     /translation="MSITKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAG
                     PVEAAEEKTEFDVILKAAGANKVAVIKAVRGATGLGLKEAKDLVESAPAALKEGVSKD
                     DAEALKKALEEAGAEVEVK"
     gene            4136..8164
                     /gene="rpoB"
                     /locus_tag="JN001_001315"
     CDS             4136..8164
                     /gene="rpoB"
                     /locus_tag="JN001_001315"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HAY9052607.1"
                     /translation="MVYSYTEKKRIRKDFGKRPQVLDVPYLLSIQLDSFQKFIEQDPE
                     GQYGLEAAFRSVFPIQSYSGNSELQYVSYRLGEPVFDVQECQIRGVTYSAPLRVKLRL
                     VIYEREAPEGTVKDIKEQEVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSD
                     KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTE
                     QILDLFFEKVIFEIRDNKLQMELVPERLRGETASFDIEANGKVYVEKGRRITARHIRQ
                     LEKDDVKLIEVPVEYIAGKVVAKDYIDESTGELICAANMELSLDLLAKLSQSGHKRIE
                     TLFTNDLDHGPYISETLRVDPTNDRLSALVEIYRMMRPGEPPTREAAESLFENLFFSE
                     DRYDLSAVGRMKFNRSLLREEIEGSGILSKDDIIDVMKKLIDIRNGKGEVDDIDHLGN
                     RRIRSVGEMAENQFRVGLVRVERAVKERLSLGDLDTLMPQDMINAKPISAAVKEFFGS
                     SQLSQFMDQNNPLSEITHKRRISALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEG
                     PNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVTDEIHYLSAIEEGNYVIAQANSNLD
                     EEGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQVVSVGASLIPFLEHDDANRALMG
                     ANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKRGGVVQYVDASRIVIKVNEDE
                     MYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPVERGDVLADGPSTDLGELALGQ
                     NMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVSRDTKLGPEEITADIPN
                     VGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVK
                     DSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDLSEELQILEAGLF
                     SRIRAVLVAGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDELKHEFEKKLE
                     AKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPIEDMPYD
                     ENGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAKLREFIQ
                     RAYDLGADVRQKVDLSTFSDEEVMRLAENLRKGMPIATPVFDGAKEAEIKELLKLGDL
                     PTSGQIRLYDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGK
                     AQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
                     ESFNVLLKEIRSLGINIELEDE"
     gene            8241..12464
                     /gene="rpoC"
                     /locus_tag="JN001_001316"
     CDS             8241..12464
                     /gene="rpoC"
                     /locus_tag="JN001_001316"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HAY9052608.1"
                     /translation="MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETI
                     NYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERM
                     GHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERQQML
                     TEEQYLDALEEFGDEFDAKMGAEAIQALLKSMDLEQECEQLREELNETNSETKRKKLT
                     KRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRN
                     NRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGK
                     QGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLAT
                     TIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLH
                     PLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVL
                     GLYYMTRDCVNAKGEGMVLTGPKEAERLYRSGLASLHARVKVRITEYEKDANGELVAK
                     TSLKDTTVGRAILWMIVPKGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQI
                     MYTGFAYAARSGASVGIDDMVIPEKKHEIISEAEAEVAEIQEQFQSGLVTAGERYNKV
                     IDIWAAANDRVSKAMMDNLQTETVINRDGQEEKQVSFNSIYMMADSGARGSAAQIRQL
                     AGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTR
                     RLVDVAQDLVVTEDDCGTHEGIMMTPVIEGGDVKEPLRDRVLGRVTAEDVLKPGTADI
                     LVPRNTLLHEQWCDLLEENSVDAVKVRSVVSCDTDFGVCAHCYGRDLARGHIINKGEA
                     IGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKLSNVKSVVNSSGK
                     LVITSRNTELKLIDEFGRTKESYKVPYGAVLAKGDGEQVAGGETVANWDPHTMPVITE
                     VSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKIVDAQGNDV
                     LIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPRVADLFE
                     ARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSDPYEEMIPKWRQLNVFEGERV
                     ERGDVISDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLR
                     KATIVNAGSSDFLEGEQVEYSRVKIANRELEANGKVGATYSRDLLGITKASLATESFI
                     SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEA
                     PAAPQVTAEDASASLAELLNAGLGGSDNE"
     gene            12677..13216
                     /locus_tag="JN001_001317"
     CDS             12677..13216
                     /locus_tag="JN001_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-shock protein C"
                     /protein_id="HAY9052609.1"
                     /translation="MKQEVEKWRPFGHPDGDIRDLSFLDAHQAVYVQHHEGKEPLEYR
                     FWVTYSLHCFTKDYEHQTNEEKQSLMYHAPKESRPFCQHRYNLARTHLKRTILALPES
                     NVIHAGYGSYAVIEVDLDGGDKAFYFVAFRAFREKKKLRLHVTSAYPISEKQKGKSVK
                     FFTIAYNLLRNKQLPQPSK"
     gene            complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JN001_001318"
     CDS             complement(13626..14759)
                     /gene="thiH"
                     /locus_tag="JN001_001318"
                     /EC_number="4.1.99.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminoacetate synthase ThiH"
                     /protein_id="HAY9052610.1"
                     /translation="MKTFSDRWRQLDWDDIRLRINGKTAVDVERALNASQFTRDDMMA
                     LLSPAASGYLEQLAQRAQRLTRQRFGNTVSFYVPLYLSNLCANDCTYCGFSMSNRIKR
                     KTLDEADIARESAAIREMGFEHLLLVTGEHQAKVGMDYFRRHLPALREQFSSLQMEVQ
                     PLAKTEYAELKQLGLDGVMVYQETYHEATYARHHLKGKKQDFFWRLETPDRLGRAGID
                     KIGLGALIGLSDNWRVDCYMVAEHLLWLQQHYWQSRYSVSFPRLRPCTGGIEPASIMD
                     ERQLVQTICAFRLLAPEIELSLSTRESPWFRDRVIPLAINNVSAFSKTQPGGYADNHP
                     ELEQFSPHDDRRPEAVAAALTAQGLQPVWKDWDSYLGRASQRL"
     gene            complement(14756..15601)
                     /gene="thiG"
                     /locus_tag="JN001_001319"
     CDS             complement(14756..15601)
                     /gene="thiG"
                     /locus_tag="JN001_001319"
                     /EC_number="2.8.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709785.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole synthase"
                     /protein_id="HAY9052611.1"
                     /translation="MSSGRNISCRMATRSCFFRLLQGVEMLRIADKTFDSHLFTGTGK
                     FASSQLMVEAIRASGSQLVTLAMKRVDLRQHNDAILEPLIAAGVTLLPNTSGAKTAEE
                     AIFAAHLAREALGTNWLKLEIHPDARWLLPDPIETLKAAEMLVQQGFVVLPYCGADPV
                     LCKRLEEVGCAAVMPLGAPIGSNQGLETRAMLEIIIQQATVPVVVDAGIGVPSHAAQA
                     LEMGADAVLVNTAIAVADDPVNMAKAFRLAVEAGLLARQSGPGSRSHFAHATSPLTGF
                     LEASA"
     gene            complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JN001_001320"
     CDS             complement(15528..15728)
                     /gene="thiS"
                     /locus_tag="JN001_001320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfur carrier protein ThiS"
                     /protein_id="HAY9052612.1"
                     /translation="MQILFNDQPMQCATGQTVHELLEQLDQRQAGAALAINQQIVPRE
                     QWTQHILQDGDQILLFQVIAGG"
     gene            complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JN001_001321"
                     /pseudo
     CDS             complement(15712..16467)
                     /gene="thiF"
                     /locus_tag="JN001_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709786.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="thiazole biosynthesis adenylyltransferase ThiF"
     gene            complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JN001_001322"
     CDS             complement(16460..17095)
                     /gene="thiE"
                     /locus_tag="JN001_001322"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709787.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY9052613.1"
                     /translation="MYQPDFPPVPFRLGLYPVVDSVQWIERLLDAGVRTLQLRIKDRR
                     DEEVEADVVAAIALGRRYNARLFINDYWRLAIKHQAYGVHLGQEDLQATDLNAIRAAG
                     LRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLADYP
                     TVAIGGISLARAPAVIATGVGSIAVISAITQAADWRLATAQLLEIAGVGDE"
     gene            complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JN001_001323"
     CDS             complement(17095..18990)
                     /gene="thiC"
                     /locus_tag="JN001_001323"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HAY9052614.1"
                     /translation="MSATKLTRREQRARAQHFIDTLEGTAFPNSKRIYLTGTHSGVRV
                     PMREIQLSPTLIGGSKEQPQFEENEAIPVYDTSGPYGDPQIAINVQQGLAKLRQPWID
                     ARGDTEELTVRSSDYTKARLADDGLDELRFSGVLTPKRAKAGRRVTQLHYARQGIITP
                     EMEFIAIRENMGRERIRSEVLRHQHPGMSFGARLPENITAEFVRDEVAAGRAIIPANI
                     NHPESEPMIIGRNFLVKVNANIGNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYI
                     HETREWILRNSPVPIGTVPIYQALEKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHA
                     GVLLRYVPMTAKRLTGIVSRGGSIMAKWCLSHHQENFLYQHFREICEICAAYDVSLSL
                     GDGLRPGSIQDANDEAQFAELHTLGELTKIAWEYDVQVMIEGPGHVPMQMIRRNMTEE
                     LEHCHEAPFYTLGPLTTDIAPGYDHFTSGIGAAMIGWFGCAMLCYVTPKEHLGLPNKE
                     DVKQGLITYKIAAHAADLAKGHPGAQIRDNAMSKARFEFRWEDQFNLALDPFTARAYH
                     DETLPQESGKVAHFCSMCGPKFCSMKISQEVRDYAATQTIEMGMADMSENFRARGGEI
                     YLRKEEA"
     regulatory      complement(19071..19171)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JN001_001324"
     CDS             complement(19224..19700)
                     /gene="rsd"
                     /locus_tag="JN001_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma D regulator"
                     /protein_id="HAY9052615.1"
                     /translation="MLNQLDNLTERVRGSNKLVDRWLHVRKHLLVAYYNLVGIKPGKE
                     SYMRLNEKALDDFCQSLVDYLSAGHFSIYERILHKLEGNGQLARAAKIWPQLEANTQQ
                     IMDYYDSSLETAIDHDNYLEFQKVLSDIGEALEARFVLEDKLILLVLDAARVKHPA"
     gene            19795..20568
                     /gene="nudC"
                     /locus_tag="JN001_001325"
     CDS             19795..20568
                     /gene="nudC"
                     /locus_tag="JN001_001325"
                     /EC_number="3.6.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) diphosphatase"
                     /protein_id="HAY9052616.1"
                     /translation="MDRIIEKLDHGWWVVSHEQKLWLPKGELPYGEAANFDLVGQRAL
                     QIGEWQGEPVWLVQQQRRHDMGSVRQVIDLDVVLFQLAGRGVQLAEFYRSHKYCGYCG
                     HEMYPSKTEWAMLCSHCRERYYPQIAPCIIVAIRRDDSILLAQHTRHRNGVHTVLAGF
                     VEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSLMTAFMAEYDSGDIVIDPK
                     ELLEANWYRYDDLPLLPPPGTVARRLIEDTVAMCRAEYE"
     gene            20608..21672
                     /gene="hemE"
                     /locus_tag="JN001_001326"
     CDS             20608..21672
                     /gene="hemE"
                     /locus_tag="JN001_001326"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HAY9052617.1"
                     /translation="MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKVTRAQAG
                     DFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILTVPDAMGLGLYFEAGEGPRFTSP
                     VTCKADVDKLPIPDPEDELGYVMNAVRTIRRELKGEVPLIGFSGSPWTLATYMVEGGS
                     SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRD
                     YQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLEAMAETGCDALGLDWTTDIA
                     DARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDVP
                     PEHAGVFVEAVHRLSEQYHR"
     gene            21682..22353
                     /gene="nfi"
                     /locus_tag="JN001_001327"
     CDS             21682..22353
                     /gene="nfi"
                     /locus_tag="JN001_001327"
                     /EC_number="3.1.21.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease V"
                     /protein_id="HAY9052618.1"
                     /translation="MDLASLRAQQIELASSVIREDRLDKDPPDLIAGADVGFEQGGEV
                     TRAAMVLLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEMLSQKPDLVFV
                     DGHGISHPRRLGVASHFGLMVDVPTIGVAKKRLCGKFEPLSSEPGALAPLMDKGEQLA
                     WVWRSKARCNPLFIATGHRVSVDSALAWVQRCMKGYRLPEPTRWADAVASERPAFVRY
                     TANQP"
     gene            22396..22986
                     /locus_tag="JN001_001328"
     CDS             22396..22986
                     /locus_tag="JN001_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjaG family protein"
                     /protein_id="HAY9052619.1"
                     /translation="MLQNPIHLRLERLESWQHVTFMACLCERMYPNYAMFCQQTGFGD
                     GQIYRRILDLIWETLTVKDAKVNFDSQLEKFEEAIPSADDFDLYGVYPAIDACVVLSE
                     LVHSRLSGETLEHAVEVSKTSITTVAMLEMTQVGREMSDEELKENPAVEQEWDIQWEI
                     FRLLAECEERDIELIKGLRADLREAGESNIGIIFQQ"
     gene            23173..23445
                     /gene="hupA"
                     /locus_tag="JN001_001329"
     CDS             23173..23445
                     /gene="hupA"
                     /locus_tag="JN001_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017460010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein HU-alpha"
                     /protein_id="HAY9052620.1"
                     /translation="MNKTQLIDVIAEKAELSKTQAKAALESTLAAITESLKEGDAVQL
                     VGFGTFKVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK"
     gene            23458..24153
                     /locus_tag="JN001_001330"
     CDS             23458..24153
                     /locus_tag="JN001_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1481 domain-containing protein"
                     /protein_id="HAY9052621.1"
                     /translation="MNSFNEGVVSPLLSFWRRSLMLAGALLLTACSHNSSLPPFTASG
                     FAEDQGAVRIWRKDSGDNVHLLAVFSPWRSGDTTTREYRWQGDNLTLININVYSKPPV
                     NIRARFDDRGDLSFMQRESDGEKQQLSNDQIDLYRYRADQIRQISDALRQGRVVLRQG
                     RWHAMEQTVTTCEGQTIKPDLDSQAIAHIERRQSRSSVDVSVAWLEAPEGSQLLLVAN
                     SDFCRWQPNEKTF"
     gene            complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JN001_001331"
     CDS             complement(24155..24580)
                     /gene="zraP"
                     /locus_tag="JN001_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc resistance sensor/chaperone ZraP"
                     /protein_id="HAY9052622.1"
                     /translation="MKRNTKIALVMMALSAMAMGSTSAFAHGGHGMWQQNAAPLTSEQ
                     QTAWQKIHNDFYAQSSALQQQLVTKRYEYNALLAANPPDSSKINAVAKEMENLRQSLD
                     ELRVKRDIAMAEAGIPRGAGMGMGYGGCGGGGHMGMGHW"
     gene            24818..26194
                     /gene="zraS"
                     /locus_tag="JN001_001332"
     CDS             24818..26194
                     /gene="zraS"
                     /locus_tag="JN001_001332"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     ZraS"
                     /protein_id="HAY9052623.1"
                     /translation="MRFMQRSKDSLAKWLSAILPVVIVGLVGLFAVTVIRDYGRETAA
                     ARQTLLEKGSVLIRALESGSRVGMGMRMHHAQQQALLEEMAGQPGVRWFAVTDEQGTI
                     VMHSNSGMVGKQLYSPQEMQQLHPGDEEAWRRIDSADGEPVLEIYRQFQPMFAAGMHR
                     MRHMQQYAATPQAIFIAFDASNIVSAEDREQRNTLIILFALATVLLASVLSFFWYRRY
                     LRSRQLLQDEMKRKEKLVALGHLAAGVAHEIRNPLSSIKGLAKYFAERAPAGGEAHQL
                     AQVMAKEADRLNRVVSELLELVKPTHLALQAVDLNTLINHSLQLVSQDANSREIQLRF
                     TANDTLPEIQADPDRLTQVLLNLYLNAIQAIVQHGVISVTVSESGAGVKISVTDSGKG
                     IAADQLEAIFTPYFTTKAEGTGLGLAVVHNIVEQHGGTIQVASQEGKGSTFTLWLPVN
                     ITRKDPQG"
     gene            26191..27515
                     /gene="zraR"
                     /locus_tag="JN001_001333"
                     /pseudo
     CDS             26191..27515
                     /gene="zraR"
                     /locus_tag="JN001_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418432.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent response regulator
                     transcription factor ZraR"
     gene            complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JN001_001334"
     CDS             complement(27512..28801)
                     /gene="purD"
                     /locus_tag="JN001_001334"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HAY9052624.1"
                     /translation="MKVLVIGNGGREHALAWKAAQSPLVETVFVAPGNAGTALEPALQ
                     NVAIGVTDIPALLDFAQNEKIDLTIVGPEAPLVKGVVDTFRAAGLKIFGPTAGAAQLE
                     GSKAFTKDFLARHKIPTAEYQNFTEVEPALAYLREKGAPIVIKADGLAAGKGVIVAMT
                     LEEAEAAVHDMLAGNAFGDAGHRIVIEEFLDGEEASFIVMVDGEHVLPMATSQDHKRV
                     GDKDTGPNTGGMGAYSPAPVVTDDVHQRTMERIIWPTVKGMAAEGNTYTGFLYAGLMI
                     DKQGNPKVIEFNCRFGDPETQPIMLRMKSDLVELCLAACESKLDEKTSEWDERASLGV
                     VMAAGGYPGDYRTGDVIHGLLLEEVAGGKVFHAGTKLADDEQVVTNGGRVLCVTALGH
                     TVAEAQKRAYALMTDIHWDDCFCRKDIGWRAIEREQN"
     gene            complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JN001_001335"
     CDS             complement(28813..30402)
                     /gene="purH"
                     /locus_tag="JN001_001335"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HAY9052625.1"
                     /translation="MQQRRPVRRALLSVSDKAGIVEFAQALSARGVELLSTGGTARLL
                     AEKGLPVTEVSDYTGFPEMMDGRVKTLHPKVHGGILGRRGQDDAIMEEHQIQPIDMVV
                     VNLYPFAQTVAREGCSLEDAVENIDIGGPTMVRSAAKNHKDVAIVVKSSDYDAIIKEM
                     DDNEGSLTLATRFDLAIKAFEHTAAYDSMIANYFGSMVPAYHGESKEAAGRFPRTLNL
                     NFIKKQDMRYGENSHQQAAFYIEENVKEASVATATQVQGKALSYNNIADTDAALECVK
                     EFAEPACVIVKHANPCGVAIGNSILDAYDRAYKTDPTSAFGGIIAFNRELDAETAQAI
                     ISRQFVEVIIAPSASEEALKITAAKQNVRVLTCGQWGERVPGLDFKRVNGGLLVQDRD
                     LGMVGAEELRVVTQRQPTEQELRDALFCWKVAKFVKSNAIVYAKNNMTIGIGAGQMSR
                     VYSAKIAGIKAADEGLEVKGSSMASDAFFPFRDGIDAAAAAGVTCVIQPGGSIRDDEV
                     IAAADEHGIAMLFTDMRHFRH"
BASE COUNT         7315 a         7972 c         8420 g         7163 t
ORIGIN      
        1 gcaaaagttc tgagctaatt gccgataaca tttgactcaa tgcgcactaa aagggcatca
       61 tttgatgccc tttttgcacg ctttcgtacc agaacctggc tcatcagtga ttttctttgt
      121 cataatcatt gctgagacag gctctgttga gggcgtataa tccgaaaagc taatacgcgt
      181 ttcgatttgg tttgcctcgc gatcgcgggg tgaaaatgtt tgtagaaaac ttctgacagg
      241 ttggtttatg agtgcgaata ccgaagctca aggaagcggg cgcggcctgg aagcgatgaa
      301 gtgggtcgtt gtggtggcat tgctcttggt ggcgattgtc ggcaactacc tttatcgcga
      361 cattatgctg ccgctgcgtg cgctggccgt agtaattctg attgctgcag cgggtggtgt
      421 cgcgctgtta acgacaaaag gtaaagctac cgttgctttt gcccgtgaag cgcgtaccga
      481 agtccgtaag gtcatttggc cgactcgcca ggaaacattg cacaccacgc tgattgtggc
      541 tgcggttacc gcagtaatgt cactgatcct gtggggactg gatggtattc tggttcgcct
      601 ggtatccttt atcactggcc tgaggttctg agatgtctga agctcctaaa aagcgctggt
      661 acgtcgttca ggcgttttcc ggttttgaag gccgcgtagc aacgtcgctg cgtgagcata
      721 tcaaattaca caacatggaa gatttgtttg gtgaagtcat ggtaccaacc gaagaagtgg
      781 ttgaaatccg tggcggtcag cgtcgcaaaa gcgaacgtaa attcttccct ggctacgtcc
      841 tcgttcagat ggtgatgaac gacgcgagct ggcacctggt gcgcagcgta ccgcgagtga
      901 tgggcttcat cggcggtact tccgatcgtc ctgcgccaat cagcgataaa gaagtcgatg
      961 cgattatgaa ccgcctgcag caggttggtg ataagccgcg tccgaaaacg ctgtttgaac
     1021 cgggtgaaat ggtccgtgtt aatgatggtc cgttcgctga cttcaacggt gttgttgaag
     1081 aagtggatta cgagaaatct cgtctgaaag tgtctgtttc tatcttcggt cgtgcgaccc
     1141 cggtagagct ggacttcagc caggttgaaa aagcctaacc cagcgatcaa aaaagcggcg
     1201 atttaatcgt tgcacaaggc gcgagattgg aatacaattt cgcgcctttt atttttatgg
     1261 gccttgcccg taaaaacgat tttttatatc acggggagcc tctcagaggc gttattaccc
     1321 aacttgagga atttataatg gctaagaaag tacaagccta tgtcaagctg caggttgcag
     1381 ctggtatggc taacccgagt ccgccagtag gtccggctct gggtcagcag ggcgtaaaca
     1441 tcatggaatt ctgcaaagcg ttcaacgcaa aaactgattc catcgaaaaa ggtctgccga
     1501 ttccggtagt aatcaccgtt tacgctgacc gttctttcac tttcgttacc aagaccccgc
     1561 cggcagcagt tctgctgaaa aaagcggctg gtatcaagtc tggtgccggt aagccgaaca
     1621 aagacaaagt gggtaaaatt tcccgcgctc agctgcagga aatcgcgcag accaaagctg
     1681 ccgacatgac tggtgccgac attgaagcga tgactcgctc catcgaaggt actgcacgtt
     1741 ccatgggcct ggtagtggag gactaagaaa tggctaaact gaccaagcgc atgcgtgtta
     1801 tccgcgagaa agttgatgca accaaacagt acgacatcaa cgaagctatc gcactgctga
     1861 aagagctggc gactgctaaa ttcgtagaaa gcgtggacgt agctgttaac ctcggcatcg
     1921 acgctcgtaa atctgaccag aacgtacgtg gtgcaactgt actgccgcac ggtactggcc
     1981 gttccgttcg cgtagccgta tttacccaag gtgcaaacgc tgaagctgct aaagctgcag
     2041 gcgcagaact ggtaggtatg gaagatctgg ctgaccagat caagaaaggc gaaatgaact
     2101 ttgacgttgt tattgcttct ccggatgcaa tgcgcgttgt tggccagctg ggccaggttc
     2161 tgggtccgcg cggcctgatg ccaaacccga aagtgggtac tgtaacaccg aacgttgctg
     2221 aagcggttaa aaacgctaaa gctggccagg ttcgttaccg taacgacaaa aacggcatca
     2281 tccacaccac catcggtaaa gtggactttg acgctgacaa actgaaagaa aacctggaag
     2341 ctctgctggt tgcgctgaaa aaagcaaaac cgactcaggc gaaaggcgtg tacatcaaga
     2401 aagttagcat ctccaccacc atgggtgcag gtgttgcagt tgaccaggct ggcctgagcg
     2461 cttctgtaaa ctaatgcctt tacgtgggcg gtgattttgt ctacaatctt acccccacgt
     2521 ataatgctta atgcagacgt atatccgaga tattcgggtt gtggcaaggc ggcaactgag
     2581 tgagtcgcca agagcatagc taactatgtg actggtgcga atgaaggaag ccaacgccgc
     2641 cacaagttga atagcgacgg atagaaaaga tttgttcgtt ggagcttggc ctatccaggc
     2701 ctccgtcgaa gaccgcagga gtttcgcaag aaacttaatc ccctgcgtag acggtgacag
     2761 aacgctaaga ttattctttt atattctggc ttgtttctgc tcaccgtaat taagacgctc
     2821 tctccgtttg gaggagtgaa gtgagttcca gagattttct ctggcaaaca tccaggagca
     2881 aagctaatgg ctttaaatct tcaagacaaa caagcgattg ttgctgaagt cagcgaagta
     2941 gccaaaggcg cgctgtctgc agtagttgcg gattcccgtg gcgtaactgt agataaaatg
     3001 actgaactgc gtaaagcagg tcgcgaagct ggcgtataca tgcgtgttgt tcgtaacacc
     3061 ctgctgcgcc gtgctgttga aggtactccg ttcgagtgcc tgaaagacgc gtttgttggt
     3121 ccgaccctga ttgcatactc tatggaacac ccgggcgctg ctgctcgtct gttcaaagag
     3181 ttcgcgaaag cgaatgcaaa atttgaggtc aaagccgctg cctttgaagg tgagctgatc
     3241 ccggcgtctc agatcgaccg cctggcaact ctgccgacct acgaagaagc aattgcacgc
     3301 ctgatggcaa ccatgaaaga agcttcggct ggcaaactgg ttcgtactct ggctgctgta
     3361 cgcgatgcga aagaagctgc ttaatcgcag ttatcttttt aacgcattcg cttacgtata
     3421 aacttattct gatattcagg aacaatttaa atgtctatca ctaaagatca aatcattgaa
     3481 gcagttgcag ctatgtctgt aatggacgtt gtagaactga tctctgcaat ggaagaaaaa
     3541 ttcggtgttt ccgctgctgc tgctgtagct gtagctgctg gcccggttga agctgctgaa
     3601 gaaaaaactg aattcgacgt aattctgaaa gctgctggcg ctaacaaagt tgctgttatc
     3661 aaagcagtac gtggcgcaac tggcctgggt ctgaaagaag ctaaagacct ggtagaatct
     3721 gcaccggctg ctctgaaaga aggcgtgagc aaagacgacg cagaagcact gaaaaaagct
     3781 ctggaagaag ctggcgctga agttgaagtt aaataagcca acccttccgg ttgcagcctg
     3841 agaaatcagg ctgatggctg gtgacttttt agtcaccagc ctttttgcgc tgtaaggcgc
     3901 cagtagcgtt tcacactgtt tgactactgc tgtgcctttc aatgcttgtt tctatcgacg
     3961 acttaatata ctgcgacagg acgtccgttc tgtgtaaatc gcaatgaaat ggtttaagcg
     4021 tgatagcaac aggcattgcg gaaagtgttc cattttccgg tcaacaaaat agtgttgcac
     4081 aaactgtccg ctcaatggac agatgggtcg acttgtcagc gagctgagga accctatggt
     4141 ttactcctat accgagaaaa aacgtattcg taaggatttt ggtaaacgtc cacaagttct
     4201 ggatgtacct tatctccttt ctatccagct tgactcgttt cagaaattta tcgagcaaga
     4261 tcctgaaggg cagtatggtc tggaagcagc tttccgttcc gtattcccga ttcagagcta
     4321 cagcggtaat tccgagctgc aatacgtcag ctaccgcctt ggcgaaccgg tgtttgacgt
     4381 ccaggaatgt caaatccgtg gcgtgaccta ttccgcaccg ctgcgcgtta aactgcgtct
     4441 ggtgatctat gagcgcgaag cgccggaagg caccgtaaaa gacattaaag aacaagaagt
     4501 ctacatgggc gaaattccgc tcatgacaga caacggtacc tttgttatca acggtactga
     4561 gcgtgttatc gtttcccagc tgcaccgtag tccgggcgtc ttctttgact ccgacaaagg
     4621 taaaacccac tcttcgggta aagtgctgta taacgcgcgc atcatccctt accgtggttc
     4681 ctggctggac ttcgaattcg atccgaagga caacctgttc gtacgtatcg accgtcgccg
     4741 taaactgcct gcgaccatca ttctgcgcgc cctgaactac accacagagc agatcctcga
     4801 cctgttcttt gaaaaagtta tctttgaaat ccgtgataac aagctgcaga tggaactggt
     4861 gccggaacgc ctgcgtggtg aaaccgcatc ttttgacatc gaagctaacg gtaaagtgta
     4921 cgtagaaaaa ggccgccgta tcactgcgcg ccacattcgc cagctggaaa aagacgacgt
     4981 caaacttatc gaagtcccgg ttgagtacat cgcaggtaaa gtggttgcta aagactatat
     5041 tgatgagtct accggcgagc tgatctgcgc agcgaacatg gagctgagcc tggatctgct
     5101 ggctaagctg agccagtctg gtcacaagcg tatcgaaacg ctgttcacca acgatctgga
     5161 tcacggccca tatatctctg aaaccttacg tgtcgaccca actaacgacc gtctgagcgc
     5221 actggtagaa atctaccgca tgatgcgccc tggcgagccg ccgactcgtg aagcagctga
     5281 aagcctgttc gagaacctgt tcttctccga agaccgttat gacttgtctg cggttggtcg
     5341 tatgaagttc aaccgttctc tgctgcgcga agaaatcgaa ggttccggta tcctgagcaa
     5401 agacgacatc attgatgtta tgaaaaagct catcgatatc cgtaacggta aaggcgaagt
     5461 cgatgatatc gaccacctcg gcaaccgtcg tatccgttcc gttggcgaaa tggcggaaaa
     5521 ccagttccgc gttggcttgg tacgtgtaga gcgtgcggtg aaagagcgtc tgtctctggg
     5581 cgatctggat accctgatgc ctcaggatat gatcaacgcc aagccgattt ccgcagcagt
     5641 gaaagagttc ttcggttcca gccagctgtc tcagtttatg gaccagaaca acccgctgtc
     5701 tgagattacg cacaaacgtc gtatctccgc actcggccca ggcggtctga cccgtgaacg
     5761 tgcaggcttc gaagttcgag acgtacaccc gactcactac ggtcgcgtat gtccaatcga
     5821 aacccctgaa ggtccgaaca tcggtctgat caactctctg tccgtgtacg cacagactaa
     5881 cgaatacggc ttccttgaga ctccgtatcg taaagtgacc gacggtgttg taactgacga
     5941 aattcactac ctgtctgcta tcgaagaagg caactacgtt atcgcccagg cgaactccaa
     6001 cttggatgaa gaaggccact tcgtagaaga cctggtaact tgccgtagca aaggcgaatc
     6061 cagcttgttc agccgcgacc aggttgacta catggacgta tccacccagc aggtggtatc
     6121 cgtcggtgcg tccctgatcc cgttcctgga acacgatgac gccaaccgtg cattgatggg
     6181 tgcgaacatg caacgtcagg ccgttccgac tctgcgcgct gataagccgc tggttggtac
     6241 tggtatggaa cgtgctgttg ccgttgactc cggtgtaact gcggtagcta aacgtggtgg
     6301 tgtcgttcag tacgtggatg cttcccgtat cgttatcaaa gttaacgaag acgagatgta
     6361 tccgggtgaa gcaggtatcg acatctacaa cctgaccaaa tacacccgtt ctaaccagaa
     6421 cacctgtatc aaccagatgc cgtgtgtgtc tctgggtgaa ccggttgaac gtggcgacgt
     6481 gctggcagac ggtccgtcca ccgacctcgg tgaactggcg cttggtcaga acatgcgcgt
     6541 agcgttcatg ccgtggaatg gttacaactt cgaagactcc atcctcgtat ccgagcgtgt
     6601 tgttcaggaa gaccgtttca ccaccatcca cattcaggaa ctggcgtgtg tgtcccgtga
     6661 caccaagctg gggccggaag agatcaccgc tgacatcccg aacgtgggtg aagctgcgct
     6721 ctccaaacta gatgaatccg gtatcgttta cattggtgcg gaagtgaccg gtggcgacat
     6781 tctggttggt aaggtaacgc cgaaaggtga aactcagctg accccagaag aaaaactgct
     6841 gcgtgcgatc ttcggtgaga aagcctctga cgttaaagac tcttctctgc gcgtaccaaa
     6901 cggtgtatcc ggtacggtta tcgacgttca ggtctttact cgcgatggcg tagaaaaaga
     6961 caaacgtgcg ctggaaatcg aagaaatgca gctcaaacag gcgaagaaag acctgtctga
     7021 agaactgcag atcctcgaag cgggtctgtt cagccgtatc cgtgctgtgc tggtagccgg
     7081 tggcgttgaa gctgagaagc tcgacaaact gccgcgcgat cgctggctgg agctgggcct
     7141 gacagacgaa gagaaacaaa atcagctgga acagctggct gagcagtatg acgaactgaa
     7201 acacgagttc gagaagaaac tcgaagcgaa acgccgcaaa atcacccagg gcgacgatct
     7261 ggcaccgggc gtgctgaaga ttgttaaggt atatctggcg gttaaacgcc gtatccagcc
     7321 tggtgacaag atggcaggtc gtcacggtaa caagggtgta atttctaaga tcaacccgat
     7381 cgaagatatg ccttacgatg aaaacggtac gccggtagac atcgtactga acccgctggg
     7441 cgtaccgtct cgtatgaaca tcggtcagat cctcgaaacc cacctgggta tggctgcgaa
     7501 aggtatcggc gacaagatca acgccatgct gaaacagcag caagaagtcg cgaaactgcg
     7561 cgaattcatc cagcgtgcgt acgatctggg cgctgacgtt cgtcagaaag ttgacctgag
     7621 taccttcagc gatgaagaag ttatgcgtct ggctgaaaac ctgcgcaaag gtatgccaat
     7681 cgcaacgccg gtgttcgacg gtgcgaaaga agcagaaatt aaagagctgc tgaaacttgg
     7741 cgacctgccg acttccggtc agatccgcct gtacgatggt cgcactggtg aacagttcga
     7801 gcgtccggta accgttggtt acatgtacat gctgaaactg aaccacctgg tcgacgacaa
     7861 gatgcacgcg cgttccaccg gttcttacag cctggttact cagcagccgc tgggtggtaa
     7921 ggcacagttc ggtggtcagc gtttcgggga gatggaagtg tgggcgctgg aagcatacgg
     7981 cgcagcatac accctgcagg aaatgctcac cgttaagtct gatgacgtga acggtcgtac
     8041 caagatgtat aaaaacatcg tggacggcaa ccatcagatg gagccgggca tgccagaatc
     8101 cttcaacgta ttgttgaaag agattcgttc gctgggtatc aacatcgaac tggaagacga
     8161 gtaattctcg ctcaaacagg tcactgctgt cgggttaaaa cccggcagcg gattgtgcta
     8221 actccgacgg gagcaaatcc gtgaaagatt tattaaagtt tctgaaagcg cagactaaaa
     8281 ccgaagagtt tgatgcgatc aaaattgctc tggcttcgcc agacatgatc cgttcatggt
     8341 ctttcggtga agttaaaaag ccggaaacca tcaactaccg tacgttcaaa ccagaacgtg
     8401 acggcctttt ctgcgcccgt atctttgggc cggtaaaaga ttacgagtgc ctgtgcggta
     8461 agtacaagcg cctgaaacac cgtggcgtca tctgtgagaa gtgcggcgtt gaagtgaccc
     8521 agactaaagt acgccgtgag cgtatgggcc acatcgaact ggcttccccg actgcgcaca
     8581 tctggttcct gaaatcgctg ccgtcccgta tcggtctgct gctcgatatg ccgctgcgcg
     8641 atatcgaacg cgtactgtac tttgaatcct atgtggttat cgaaggcggt atgaccaacc
     8701 tggaacgtca gcagatgctg actgaagagc agtatctgga cgcgctggaa gagttcggtg
     8761 acgaattcga cgcgaagatg ggtgcggaag caatccaggc tctgctgaag agcatggatc
     8821 tggagcaaga gtgcgaacag ctgcgcgaag agctgaacga aaccaactcc gaaaccaagc
     8881 gtaaaaagct gaccaagcgt atcaaactgc tggaagcgtt cgttcagtct ggtaacaaac
     8941 cagagtggat gatcctgacc gttctgccgg tactgccgcc agatctgcgt ccgctggttc
     9001 cgctggatgg tggtcgtttc gcgacttctg acctgaacga tctgtatcgt cgcgtcatta
     9061 accgtaacaa ccgtctgaaa cgtctgctgg atctggctgc gccggacatc atcgtacgta
     9121 acgaaaaacg tatgctgcag gaagcggtag acgccctgct ggataacggt cgtcgcggtc
     9181 gtgcgatcac cggttctaac aagcgtcctc tgaaatcttt ggccgacatg atcaaaggta
     9241 aacagggtcg tttccgtcag aacctgctcg gtaagcgtgt tgactactcc ggtcgttctg
     9301 taatcaccgt aggtccatac ctgcgtctgc atcagtgcgg tctgccgaag aaaatggcgc
     9361 tggagctgtt caaaccgttc atctacggca agctggaact gcgtggtctt gctaccacca
     9421 ttaaagctgc gaagaaaatg gttgagcgcg aagaagctgt cgtttgggat atcctggacg
     9481 aagttatccg cgaacacccg gtactgctga accgtgcacc gactctgcac cgtctgggta
     9541 tccaggcatt tgaaccggta ctgatcgaag gtaaagctat ccagctgcac ccgctggttt
     9601 gtgcggcata taacgccgac ttcgatggtg accagatggc tgttcacgta ccgctgacgc
     9661 tggaagccca gctggaagcg cgtgcgctga tgatgtctac caacaacatc ctgtccccgg
     9721 cgaacggcga accaatcatc gttccgtctc aggacgttgt tctgggtctg tactatatga
     9781 cccgtgactg tgttaacgcc aaaggcgaag gcatggtgct gactggcccg aaagaagcag
     9841 aacgtctgta tcgctctggt ctggcttctc tgcatgcgcg cgttaaagtg cgtatcaccg
     9901 agtatgaaaa agatgcaaac ggtgaattag tagcgaaaac cagcctgaaa gacacgactg
     9961 ttggccgtgc cattctgtgg atgattgtac cgaaaggtct gccttactcc atcgtcaacc
    10021 aggcgctggg taaaaaagca atctccaaaa tgctgaacac ctgctaccgc attctcggtc
    10081 tgaaaccgac cgttattttt gcggaccaga tcatgtacac cggcttcgcc tatgcagcgc
    10141 gttctggtgc atctgttggc atcgatgaca tggtcatccc ggagaagaaa cacgaaatca
    10201 tctccgaggc agaagcagaa gttgctgaaa ttcaggagca gttccagtct ggtctggtaa
    10261 ctgcgggcga acgctacaac aaagttatcg atatctgggc tgcggcgaac gatcgtgtat
    10321 ccaaagcgat gatggataac ctgcaaactg aaaccgtgat taaccgtgac ggtcaggaag
    10381 agaagcaggt ttccttcaac agcatctaca tgatggccga ctccggtgcg cgtggttctg
    10441 cggcacagat tcgtcagctt gctggtatgc gtggtctgat ggcgaagccg gatggctcca
    10501 tcatcgaaac gccaatcacc gcgaacttcc gtgaaggtct gaacgtactc cagtacttca
    10561 tctccaccca cggtgctcgt aaaggtctgg cggataccgc actgaaaact gcaaactccg
    10621 gttacctgac tcgtcgtctg gttgacgtgg cgcaggacct ggtggttacc gaagacgatt
    10681 gtggtaccca tgaaggtatc atgatgactc cggttatcga aggtggtgat gttaaagagc
    10741 cgctgcgcga tcgcgtactg ggtcgtgtaa ctgctgaaga cgttctgaag ccgggtactg
    10801 ctgatatcct cgttccgcgc aacacgctgc tgcacgaaca gtggtgtgac ctgctggaag
    10861 agaactctgt cgacgcggtt aaagtacgtt ctgttgtatc ttgtgacacc gactttggtg
    10921 tatgtgcgca ctgctacggt cgtgacctgg cgcgtggcca catcatcaac aagggtgaag
    10981 caatcggtgt tatcgcggca cagtccatcg gtgaaccggg tacacagctg accatgcgta
    11041 cgttccacat cggtggtgcg gcatctcgtg cggctgctga atccagcatc caggtgaaaa
    11101 acaaaggtag catcaagctc agcaacgtga agtcggttgt gaactccagc ggtaaactgg
    11161 ttatcacttc ccgtaatact gaactgaaac tgatcgacga attcggtcgt accaaagaaa
    11221 gctacaaagt accttacggt gcggtactgg cgaaaggcga tggcgaacag gttgctggcg
    11281 gcgaaaccgt tgcaaactgg gacccgcaca ccatgccggt tatcaccgaa gtaagcggtt
    11341 ttgtacgctt tactgacatg atcgacggtc agaccattac tcgtcagaca gacgaattga
    11401 ccggtctgtc ttcgctggtg gttctggatt ccgcagaacg taccgcaggt ggtaaagatc
    11461 tgcgtccggc actgaaaatc gttgatgctc agggtaacga cgttctgatt ccgggtaccg
    11521 atatgcctgc gcagtacttc ctgccgggta aagcgattgt tcagctggaa gatggcgtac
    11581 agatcagctc tggtgacacc ctggcgcgta ttccgcagga atccggcggt accaaggaca
    11641 tcaccggtgg tctgccgcgc gttgcggacc tgttcgaagc acgtcgtccg aaagagccgg
    11701 caatcctggc tgaaatcagc ggtatcgttt ccttcggtaa agaaaccaaa ggtaaacgtc
    11761 gtcttgttat caccccggta gacggtagcg atccgtacga agagatgatt ccgaaatggc
    11821 gtcagctcaa cgtgttcgaa ggtgaacgtg tagaacgtgg tgacgtaatt tccgacggtc
    11881 cggaagcgcc gcacgacatt ctgcgtctgc gtggtgttca tgctgttact cgttacatcg
    11941 ttaacgaagt acaggacgta taccgtctgc agggcgttaa gattaacgat aaacacatcg
    12001 aagttatcgt tcgtcagatg ctgcgtaaag ctaccatcgt taacgcgggc agctccgact
    12061 tcctggaagg cgaacaggtt gaatactctc gcgtcaagat cgcaaaccgc gaactggaag
    12121 cgaacggcaa agtgggtgca acttactccc gcgatctgct gggtatcacc aaagcgtctc
    12181 tggcaaccga gtccttcatc tccgcggcat cgttccagga gaccactcgc gtgctgaccg
    12241 aagcagccgt tgcgggcaaa cgcgacgaac tgcgcggcct gaaagagaac gttatcgtgg
    12301 gtcgtctgat cccggcaggt accggttacg cgtaccacca ggatcgtatg cgtcgccgtg
    12361 ctgcgggtga agctccggct gcaccgcagg tgactgcaga agacgcatct gccagcctgg
    12421 cagaactgct gaacgcaggt ctgggcggtt ctgataacga gtaatcgtta atccgcaaat
    12481 aacgtaaaaa cccgcttcgg cgggtttttt tatgggggga gtttagggaa agagcatttg
    12541 tcagaatatt taaggaattt ctgaatactc ataatcaatg tagagatgac taatatcctg
    12601 aaactgactg aactaattga gtcaaactcg gcaaggattc gatactattc ctgtgtaact
    12661 ttcttaagga acgagaatga aacaggaagt ggaaaagtgg cgaccttttg gacatccgga
    12721 tggtgatatt cgtgatttat catttcttga tgctcatcag gctgtctacg ttcagcatca
    12781 tgagggcaaa gagcctttag agtatcgctt ttgggttacc tactctcttc actgcttcac
    12841 aaaagattat gaacatcaga cgaacgaaga aaaacaatcg ttaatgtacc acgcgcctaa
    12901 agaatctcgc cccttctgcc agcaccgtta taacttagcg cgcacacact taaaaagaac
    12961 tattttggcg ctgccagaaa gcaacgttat tcatgccggg tatggtagct atgccgtgat
    13021 tgaggtggac ttagacggag gagataaggc attttacttt gttgcgttca gggctttcag
    13081 ggaaaagaaa aaactccgtt tgcatgtaac tagcgcttat cccatttctg aaaaacagaa
    13141 aggtaaatca gtgaaatttt tcaccattgc ctacaactta ttgagaaata agcagcttcc
    13201 tcagccctca aaataacaaa acccacctta aggtgggttt cgccagagaa ttatctctgg
    13261 tattcagaac gccattaccg gactttgcct tgaccttgcg ataatcgcag gttgcgggat
    13321 gtctgaattt cttcagtctg ctgcatcctg gaagatgaga acatgtgttc ttattttcgt
    13381 ctctatcata gttgagtatt tactctctta caatcagatc tctttcattg ctcaacaggc
    13441 gatggcttca gactttgcat tacggaattt ttaagaaagg cagggcgaaa cgaggaagaa
    13501 gcttttcgcc ctggacaaca ttcctgctga cggcactacc ataaaaaaac acaacgcttt
    13561 caacaacctt gcgtttttca tcttccgtag cggctcggaa taaatttacg ttcttacatt
    13621 ccgtctcata gtctttgcga ggcccgtccc agatagctgt cccagtcttt ccataccggc
    13681 tgcaaaccct gagcggttaa cgcggcagca accgcttccg gtctgcgatc gtcgtgcggt
    13741 gagaactgtt ccaactcggg gtgattatcg gcatagccac ctggctgcgt tttcgagaag
    13801 gcgctgacgt tattgatcgc cagcggaata acgcgatcgc gaaaccacgg tgattcccgc
    13861 gtggagagtg acagttcaat ctccggtgca agcagtcgga aggcgcagat ggtttgcact
    13921 aactggcgtt catccataat cgacgcaggc tcaatgccgc cagtacacgg gcgcaggcgc
    13981 ggaaaggaga cagagtaacg gctttgccag taatgctgtt gcagccatag caaatgttcg
    14041 gcaaccatat agcagtcaac gcgccagttg tcggaaaggc caattagcgc gccgaggcct
    14101 atcttatcaa tccccgcacg ccccagccga tccggcgttt ccagccgcca gaagaagtcc
    14161 tgttttttgc ctttcagatg atggcgggca taagtcgcct cgtgatatgt ctcctgataa
    14221 accatcacgc catccagacc aagctgcttt aactcggcgt attccgtctt cgccagcggt
    14281 tgcacttcca tttgtagtga agagaactgt tcacgcaggg cggggagatg acgacgaaag
    14341 taatccatcc ccactttcgc ctgatgttca ccagtgacta atagcagatg ttcaaagccc
    14401 atctcccgta tagcggcgct ttccctggca atatccgctt catccagcgt tttgcgcttg
    14461 atgcgattac tcatggaaaa tccgcagtac gtgcagtcgt tagcgcaaag attggaaaga
    14521 taaagcggga cgtagaaact aactgtgttg ccaaatcgct gacgggtcag acgctgcgcc
    14581 cgttgggcca gttgttccag atagccactg gcggctggcg ataacagcgc catcatatcg
    14641 tcgcgggtga attgcgaggc atttagcgcc cgctctacgt caacagccgt tttgccgttg
    14701 atacgcaggc ggatgtcatc ccagtccagt tgtcgccagc gatcgctgaa ggttttcatg
    14761 ccgatgcctc cagaaatcca gtcagcgggc tggtggcatg agcaaaatga ctgcggctgc
    14821 ccggtccgga ctgacgtgcc agcaggcctg cttctaccgc cagacgaaat gccttcgcca
    14881 tgttgacggg atcgtccgct acggcaatcg ccgtattcac taacaccgcg tcggccccca
    14941 tttccagggc ctgcgctgca tggctgggaa cgccgatgcc agcatcgaca accaccggaa
    15001 ctgtggcctg ctggataata atctccagca tggcacgggt ttccagtccc tgattcgagc
    15061 caatcggcgc gccgagcggc atcaccgctg cacagccgac ttcttccaga cgtttacaca
    15121 ataccggatc ggccccgcag taaggcagca cgacaaatcc ctgttgtacc agcatttcgg
    15181 cggctttcag agtttcgatg ggatcgggca acagccagcg ggcgtcaggg tgaatctcta
    15241 attttaacca gtttgtgcct aacgcttcac gtgccagatg ggcggcgaaa atggcttctt
    15301 ccgctgtttt cgccccggaa gtatttggca gcagggtcac acccgccgcg ataagcggtt
    15361 cgaggatagc gtcgttgtgc tggcgcaagt cgacacgttt catcgccagt gtcaccagct
    15421 ggctgccgga agcgcggatc gcctccacca tcagttgtga agaagcgaat ttccctgtgc
    15481 cggtaaacag atgtgaatca aacgttttgt ccgcaatacg taacatctca accccctgca
    15541 ataacctgaa aaagcaggat ctggtcgcca tcctgcagga tatgttgcgt ccactgctca
    15601 cgcgggacga tttgctgatt aatcgccaga gccgcgcccg cttgtcgttg gtcgagttgc
    15661 tccagtagtt cgtgaacagt ttgcccggtg gcgcactgca tcggttgatc gttaaacagg
    15721 atctgcattg cttcctccgc ataccgggca accactggcg cggcgcaacg ccaggctgcg
    15781 ccactggctc gatttaccgt cgaacagtcg gagttctccc gcaggtgtct ctataccgct
    15841 taataactta atggcttcca gtgcctgcaa agtgcccata accccgacca ccgggccaac
    15901 cacgcccgcc gtgcggcagt tgcgttctgg ctcctggtta tctggccaca ggcagcggta
    15961 acacccctgc tcccagggcg gcgtcagtac catcaactga ccgccaaatc cgaccgcgct
    16021 ggcggtgata agcggcgtgt tgagtaccac gcaggcggca ttaatctcct ggcgagtcgc
    16081 catattgtcg gtacagtcga gcaccacatc ggcccgtgca accgcatctt ttaacgcctc
    16141 acccgttaac cgttgttgta atgctgtcag ttgaatgtcg ggattcaact gtgtcagtcg
    16201 ctgttggctg acctgcgatt tcgggctgtt gatatcttca gtggtaaaga gaatttgtcg
    16261 ttacagattg cttaaatgca catcgtcgtc atctgccagt accagcgtcc cgacgccagc
    16321 gcccgccagg tatagcgcag caggtgtacc cagcccgcca agaccgataa tcagcacctg
    16381 gctgtcgagc agtttttgct gcccgtcaag agcgatatca tcgagcagga tttggcggct
    16441 ataacgcata aaatcacggt cattcatcgc caactcctgc aatttccagc aactgtgccg
    16501 ttgccaaacg ccagtctgcg gcttgagtaa tggcgctgat gacggcgata ctgccgacac
    16561 ccgttgctat caccgcaggc gcgcgtgcca gactgatacc gccaatcgcc acggtgggat
    16621 aatccgccag tcgctcaaca tgccgtgcca gctgttccag cccctgcggt gcagaaggca
    16681 tctgtttggt ttgcgtcggg aacacatgtc ccagcgcgat ataagagggg cgtgctgcca
    16741 gcgcgacgtc gatttccata tcgtcatgtg tcgaaacacc cagccgcagg cctgccgcgc
    16801 ggatggcatt gagatcggtg gcttgcaaat cttcctgccc caaatggacg ccatacgcct
    16861 gatgcttgat cgcgagccgc cagtaatcgt tgataaacaa tcgcgcgtta tagcggcggc
    16921 ccagcgcaat tgccgccacg acatcggctt ccacctcttc atcgcgccga tctttgatgc
    16981 gtagctggag agtacgtacg cctgcatcca acagacgttc gatccactgt acgctgtcca
    17041 ccactgggta cagtcctaaa cgaaaaggta caggaggaaa atcaggctga tacatcacgc
    17101 ttcctcctta cgcaggtaga tttctccgcc tctggcacgg aagttctccg acatatccgc
    17161 cattcccatt tcaatagttt gcgtggcggc gtaatcacgc acttcctggc tgattttcat
    17221 cgagcagaat ttcggcccac acatggagca aaaatgggcg actttacctg actcttgcgg
    17281 cagggtttca tcgtgataag cgcgggcggt aaacgggtcg agggccagat taaactggtc
    17341 ttcccagcga aattcgaagc gggctttcga catggcgtta tcgcgaattt gcgcgcccgg
    17401 atgccctttc gccaggtcag cggcgtgggc ggcaatctta taggtgataa gcccctgctt
    17461 aacatcttct ttattaggca gacccagatg ctcttttggt gttacgtaac agagcatcgc
    17521 gcagccaaac cagccaatca tcgccgcacc aatccccgac gtgaagtggt catagcccgg
    17581 cgcaatatcg gtagttagcg gccccagagt gtaaaacggc gcttcgtggc agtgctctaa
    17641 ctcctcggtc atattgcggc ggatcatctg catcggcacg tggcctgggc cttcaatcat
    17701 cacctgcacg tcatattccc aggcaatttt ggtcagttcg cccagcgtat gcagctcggc
    17761 aaactgcgct tcatcgttgg cgtcctgaat agaaccgggg cgcagaccgt cgcccagcga
    17821 cagcgaaacg tcataagcgg cacagatttc acaaatttcg cggaagtgtt gatagaggaa
    17881 attttcctga tgatgggaga ggcaccattt cgccataatc gaaccgccgc gagagacgat
    17941 accggtcagg cgtttcgcgg tcatcggcac atagcgcaac agtacgcccg catggatagt
    18001 gaagtaatcc acaccttgct cggcctgttc cagcagcgtg tcgcggaacg cttcccaggt
    18061 aagatcttcg gcgatcccgt taaccttctc cagcgcctgg tagatcggca ctgtaccgat
    18121 cggcaccgga ctgttacgca aaatccactc gcgggtttcg tgaatatagc gaccggtgga
    18181 gagatccatc accgtatccg ctccccagcg cgtggaccat accagctttt ccacttcttc
    18241 ttcgatggaa gaggtgaccg ccgagttgcc gatattggcg ttaactttta ccaggaagtt
    18301 acggccaata atcatcggct ccgattccgg atgattaatg ttggccggga taatcgcacg
    18361 tccggcagca acttcatcac ggacaaattc cgcagtgata ttttccggca gacgtgcgcc
    18421 aaagctcatt cccggatgct ggtggcgtaa aacttcgcta cgtatgcgct cgcggcccat
    18481 attctcgcgg atggcgatga attccatttc cggagtgatg atgccctggc gggcgtagtg
    18541 cagttgggtg acacggcgtc ctgctttggc gcgttttggt gttagtacgc cgctaaaacg
    18601 cagttcgtcg aggccatcat ctgccagccg cgctttagtg taatcggaac tgcgcacggt
    18661 aagttcttcg gtatcgccgc gcgcatcgat ccacggctgg cgtagttttg ccagcccttg
    18721 ctgcacgtta atggcgatct gcggatcgcc atatgggccg gaggtgtcgt agaccggaat
    18781 cgcttcgttt tcttcaaact gcggctgttc tttgctgccg ccgattagcg tcgggctaag
    18841 ctggatctca cgcatcggca cgcgaacgcc agagtgtgtg ccagtgaggt aaatgcgttt
    18901 tgagttggga aaggcggtgc cttccagggt gtcgataaaa tgttgggccc gggcgcgttg
    18961 ttcgcggcgg gtcagttttg ttgcagacat agctcattcc aaaaagttaa ggacgtggct
    19021 tgtcagacga cggatgaagc aagagacgat cgccgcaaag gcgatgcgat agcagattaa
    19081 ctcttgttcc cttcgcaggt attagcctga tcaggttccg cggatcccga ataaacggtc
    19141 tcagccagtt aaggcactcc gacaagaaat tagcccccac aaacggggcg ttgaatgtaa
    19201 attacgcgtt aacagcgcag aactcaagca ggatgtttga cgcgggcggc gtcaagcacc
    19261 agcagaatca gcttatcttc cagcacaaag cgcgcttcca gcgcctcgcc gatgtcagat
    19321 aaaacctttt gaaactcaag gtaattatca tgatcgatgg cggtttccag gctggaatcg
    19381 tagtaatcca taatctgttg ggtattggct tcgagttgcg gccaaatctt cgcggcgcgc
    19441 gcgagttgcc cgttgccttc cagcttatga agaatgcgct cataaatact gaaatgtccg
    19501 gcagacaagt aatcgaccag gctctgacaa aaatcatcaa gggctttttc gtttagcctc
    19561 atgtacgatt ctttgccagg cttaatgcca accagattgt agtaagccac gagcagatgc
    19621 ttacgtacat gtagccagcg atcaaccagt ttgttacttc ctctgacgcg ctccgtcagg
    19681 ttatcgagct ggttaagcat gattgactcc gcaagtttgt attcaaaaac tgctcagtga
    19741 gaaatgtaaa aaccatgtta aacatgccag tgatgcaaag gtagtgcaag agctatggat
    19801 cgtataattg aaaaattaga tcacggctgg tgggtcgtca gccatgaaca aaaattatgg
    19861 ttaccgaagg gagaattgcc atatggcgaa gcggcaaatt tcgatcttgt gggtcagcgc
    19921 gcactacaaa tcggcgaatg gcagggggaa cctgtttggt tagtacaaca gcagcggcgt
    19981 cacgatatgg ggtcggtacg tcaggtcatt gatctcgatg ttgtgctgtt tcaactggcc
    20041 ggacgaggcg tacaactggc ggagttttac cgatcgcata aatactgtgg ttactgcggg
    20101 catgaaatgt atccgagcaa aaccgaatgg gcgatgctgt gcagccattg ccgtgagcgt
    20161 tactacccgc aaatcgcccc ctgcattatt gttgccatcc gtcgcgatga ttcgatcctc
    20221 ctcgcccagc atacccgcca tcgtaacggt gtccatacag tacttgccgg attcgtcgaa
    20281 gtgggcgaaa ccctcgagca ggcagtcgcg cgggaagtga tggaagagag cggaattaaa
    20341 gttaaaaact tgcgttacgt gacttctcag ccgtggccgt ttcctcagtc tttaatgacc
    20401 gcgtttatgg cggaatatga cagcggcgac atcgtgatcg acccgaaaga attgctcgag
    20461 gcgaactggt atcgctatga cgatttgccg ttactcccgc cgcccggcac cgtagcgcgc
    20521 cgtctgatag aagatactgt ggcgatgtgt cgggcagagt atgagtgatg atacactgac
    20581 cgcctgacgc actaaggaac agccaaaatg accgaactta aaaacgatcg ttatctgcgg
    20641 gcgctgctgc gccagcccgt tgatgtcact ccagtatgga tgatgcgcca ggcgggtcgc
    20701 tatctaccgg aatataaagt cacgcgcgcc caggcgggcg attttatgtc gctgtgcaaa
    20761 aacgccgagc tggcgtgcga agtgactttg caaccgctgc gtcgctaccc gctggatgcg
    20821 gcgatcctct tttccgatat cctcaccgtg ccggacgcga tggggttagg gctctatttt
    20881 gaagccggag aaggtccgcg ttttacctcg ccagtcacct gcaaagccga cgtcgataag
    20941 ctgccaattc cggacccgga agatgagctg ggttacgtga tgaacgcggt gcgtaccatt
    21001 cgtcgcgaac tgaaaggcga agtgccgctg attggttttt ccggcagccc gtggacgctg
    21061 gcaacctaca tggtggaagg cggcagcagc aaagccttca ccgtgatcaa aaaaatgatg
    21121 tatgccgatc cgcaggcgct gcacgctcta ctcgataaac tggcgaaaag cgtcactttg
    21181 tatctgaatg cgcagattaa agccggtgct caggcagtga tgattttcga cacctggggc
    21241 ggtgtgctta ccgggcgcga ttatcaacag ttctcgctct attacatgca taaaattgtt
    21301 gatggtttac tgcgtgaaaa cgacggtcgc cgcgtaccgg tcacgctgtt taccaaaggc
    21361 ggcggacagt ggctggaagc gatggcagaa accggttgcg atgcgttggg cctcgactgg
    21421 acaacggata tcgccgatgc gcgccgccgt gtgggcaata aagtcgcgtt gcagggtaat
    21481 atggatccgt cgatgctgta cgcgccgcct gcccgcattg aagaagaagt agcgactata
    21541 cttgcaggtt tcggtcacgg cgaaggtcat gtctttaacc ttggtcacgg cattcatcag
    21601 gatgtgccgc cagaacatgc tggcgtgttc gtggaggcag tgcatcgact gtctgaacaa
    21661 tatcaccgct aaggagtgat tatggatctc gcgtcattac gcgctcaaca aatcgaactg
    21721 gcttcttctg tgatccgcga ggatcgactc gataaagatc caccggatct gatcgccgga
    21781 gccgatgtcg ggtttgagca gggcggagaa gtgacgcgag cggcgatggt gctgctgaaa
    21841 tatccctcgc ttgagctggt ggagtataaa gttgcccgca tcgccaccac catgccttac
    21901 attccaggtt ttctttcctt ccgcgaatat cctgcgctgc tggcagcgtg ggagatgctg
    21961 tcgcaaaagc cggatttagt gtttgtcgat ggtcatggga tctcgcatcc tcgccgtctt
    22021 ggcgtcgcca gccattttgg tttgatggtg gatgtgccaa cgatcggcgt ggcgaaaaaa
    22081 cggctctgcg gtaaattcga accgctctcc agcgaaccgg gcgcgctggc cccactgatg
    22141 gataaaggcg agcagctggc ctgggtctgg cgcagcaaag cgcgctgtaa cccgttgttt
    22201 atcgctaccg gccatcgggt cagcgtggac agcgcgctgg cgtgggtaca acgctgcatg
    22261 aaaggctatc gtctgccgga gccaacgcgc tgggcggacg cggtggcctc ggaacgtccg
    22321 gcgttcgtgc gctatacagc aaatcagccc taattcaggt aaactgcgga taatttccgt
    22381 atttgagaac ttaacatgtt acaaaaccca attcatctgc gtctggagcg cctggaaagc
    22441 tggcagcatg tcactttcat ggcttgctta tgcgaacgca tgtaccccaa ttacgccatg
    22501 ttctgccagc aaaccggttt tggtgatggg caaatttacc gtcgtattct cgatctcatc
    22561 tgggaaacgc tgaccgttaa agacgcaaaa gtaaatttcg acagccaact ggagaaattt
    22621 gaagaagcga ttccttcagc cgacgatttc gatctgtacg gcgtttatcc ggcaatcgat
    22681 gcctgcgtgg tgttaagtga actggtccat tcgcgtttga gtggtgaaac gctcgaacac
    22741 gcggtggaag tgagtaagac ctccatcacg accgttgcga tgctggaaat gactcaggtt
    22801 ggtcgcgaaa tgagcgatga agagcttaaa gaaaacccag ctgtagagca agaatgggac
    22861 attcagtggg aaatattccg acttttagct gagtgcgaag aacgcgatat cgagctgata
    22921 aaaggcctta gggcagacct gcgtgaggcg ggtgagagca atattggtat aatttttcag
    22981 caataagacc agaaaacgtg atttaacgcc tgatttgtcg tacttggagt cttccctttc
    23041 gccccccgtc tggtctacat ttggggggcg aaaaaaagtg gctatcggtg cgtgtatgca
    23101 ggagagtgct attctggcat ttccgtcgca ctcgatgctt agcaagcgat aaacacattg
    23161 taaggataac ttatgaacaa gactcaactg attgatgtaa ttgcagagaa agcagaactg
    23221 tccaaaaccc aggctaaagc tgctctggag tccactctgg ctgcaattac tgagtctctg
    23281 aaagaaggcg atgctgtaca actggttggt ttcggtacct tcaaagtgaa ccaccgcgct
    23341 gagcgtactg gccgcaaccc gcagaccggt aaagaaatca aaattgccgc agctaacgta
    23401 ccggcatttg tttctggcaa ggcactgaaa gacgcagtta agtaagattg cgtggcagtg
    23461 aacagtttta acgaaggggt ggtttcaccc cttttgtctt tctggcgtcg atcattgatg
    23521 ctggctggcg ctctgcttct cactgcctgt agtcataact cttcacttcc tccctttacc
    23581 gccagtggat ttgctgaaga ccagggcgcg gtacgcatct ggcgaaaaga cagcggcgat
    23641 aatgtgcatc tgcttgccgt gtttagcccg tggcgcagtg gcgataccac gacgcgagag
    23701 tatcgctggc agggcgataa cctcacgctc atcaatatca atgtttacag caaaccgccg
    23761 gtgaatattc gcgcgcgttt tgacgatcgc ggtgatctga gctttatgca acgtgaatcc
    23821 gatggggaaa agcagcagct ttctaacgac caaatcgatt tataccgtta tcgtgctgat
    23881 cagatccgcc agattagcga tgccttacgt caggggagag tcgtgctgcg ccaggggcgc
    23941 tggcatgcga tggaacagac cgtgaccacc tgcgaagggc aaaccattaa acctgattta
    24001 gattcgcagg cgatagcgca tatcgagcgc cgccagagcc gctcttctgt tgatgtcagc
    24061 gtggcatggc tggaagcgcc cgaaggttcg caattactgt tagtggcaaa ctctgatttc
    24121 tgtcgctggc aacccaacga gaaaacgttc tgatttacca gtggcccata cccatatgac
    24181 cgccaccacc gcagccgccg tagcccatgc ccattccggc tccgcgcgga atacccgctt
    24241 cagccatcgc gatatctcgt ttcacccgta actcatctaa cgactgacgc aaattctcca
    24301 tctctttggc gaccgcgtta attttgctgc tatccggtgg gttcgcggct aacagggcat
    24361 tgtattcata acgcttcgtc accagttgct gttgcagtgc gctgctttga gcgtaaaagt
    24421 cattatggat tttctgccac gctgtctgtt gttcgctggt caaaggcgcg gcattttgct
    24481 gccacatacc gtgtccgccg tgagcaaatg cagatgtcga tcccatcgcc attgctgaaa
    24541 gcgccatcat taccagggca attttcgtgt tccgtttcat ggttaatcct ccagtggttg
    24601 tcttacttcg ggtattgcat cttccgtgcc aacgatgaaa cgctgatatg acgggtaatc
    24661 tggcatgata aacgagtaaa aatgactcgc ctgctgcggg tagcgagtca tttttactca
    24721 ttgaaactta agcctttgtg ttacagcgca gggtaagcgc tgataaaaga tggcatgatt
    24781 tctgctgtca gaaagggatg agcaggcaaa gaagaagatg cgttttatgc aacgttctaa
    24841 agactcctta gctaaatggt taagcgcgat cctccccgtg gtcattgttg ggctggtagg
    24901 gttgtttgcg gtgacggtga ttcgcgatta tgggcgcgag actgccgccg ccagacaaac
    24961 gctgctggaa aaaggcagtg tacttattcg cgctcttgaa tccggctcgc gcgtcggcat
    25021 ggggatgcgc atgcatcatg cgcagcagca ggccttactg gaagaaatgg ccgggcagcc
    25081 tggagtacgt tggtttgcgg tcacggatga acaaggaaca atcgtgatgc atagcaactc
    25141 cggcatggtg ggaaaacagc tttattcccc gcaggaaatg cagcagttac atccgggaga
    25201 tgaagaagcg tggcggcgga tcgatagcgc agacggtgag cctgttctgg aaatttatcg
    25261 ccagtttcaa ccgatgtttg ctgctggaat gcaccggatg cgccatatgc agcagtatgc
    25321 cgcgacacca caagcaattt tcatcgcttt cgacgccagt aatattgtga gtgccgaaga
    25381 tcgtgagcag agaaacaccc tgattatcct cttcgccctg gcgacggtct tgctggcaag
    25441 cgtattgtca ttcttctggt atcgccgcta tctgcgctcg cgccagcttc tacaagatga
    25501 aatgaagcgc aaagagaagc tggtggcact ggggcatctg gcggcaggcg ttgcccacga
    25561 aatccgtaat ccactttcct caattaaagg gctggcgaaa tactttgccg aacgcgcgcc
    25621 agcaggggga gaagcgcatc aactggcgca ggtgatggcg aaagaagccg accgtttaaa
    25681 ccgcgtggta agcgagttgc tggaactggt taagccaacg catctggctt tgcaggcggt
    25741 ggatctcaac acgctgatta accactcatt acagctggta agccaggatg caaacagccg
    25801 ggagatccag ttacgcttta ccgccaacga cacattaccg gaaattcagg ccgatccgga
    25861 caggctgact caggtcctgt tgaatctcta tctcaatgct attcaggcga ttgttcagca
    25921 tggcgtgatt agcgtgacgg tcagcgaaag cggcgcgggc gtgaaaatca gcgttaccga
    25981 cagcggtaag ggaattgcgg cagatcagct tgaagccatc ttcactccgt acttcaccac
    26041 caaagccgaa ggcaccggat tggggctggc ggtcgtgcat aatattgttg aacaacacgg
    26101 tggtacaatt caggtcgcaa gccaggaggg aaaaggctca acgttcaccc tctggcttcc
    26161 ggtcaatatt acgcgtaagg acccacaagg atgacgcacg ataatatcga tattctggtg
    26221 gtggatgatg acattagcca ctgcactatt ttgcaggctt tactgcgcgg ctggggctat
    26281 aacgtcgcgc tggcgaacag cgggcgacag gcgctggagc aggtgcggga acaggttttt
    26341 gatcttgtgc tttgcgatgt gcgaatggcg gagatggacg gcatcgccac gctgaaagag
    26401 atcaaagcgt taaacccggc aattccggtg ctgattatga ctgcgtactc cagcgtcgag
    26461 acggcggtag aggcactgaa aactggggcg ctggattatc tcatcaagcc gctggatttc
    26521 gataacctac aggcgacgct ggaaaaggcg ctcgcgcata cgcacagtat tgatgctgaa
    26581 acacctgcgg tgactgccag ccagttcggt atggtcggta aaagcccggc gatgcaacac
    26641 ctgctcagtg aaatcgccct cgtcgcgcca tcggaagcca cagtgctgat ccacggcgat
    26701 tccggcaccg gtaaagagct ggtcgccagg gcgattcacg ccagtagcgc acgtagcgaa
    26761 aaaccgctgg taacgctcaa ctgtgcggca ctcaacgaat ccttgctgga atctgaattg
    26821 ttcggtcacg aaaaaggggc gtttactgga gccgataaac gccgggaagg gcgctttgtt
    26881 gaggcggacg gcggcacgct gtttctcgat gaaattggcg atatctcgcc gatgatgcag
    26941 gtgcgtctgc tgcgtgcgat tcaggagcgc gaagttcagc gtgtcggtag caaccagact
    27001 atctcggttg atgtccggct gattgcggcg acccatcgcg atcttgccgc agaggtgaat
    27061 gccgggcgtt ttcgccagga tctctactat cgcctgaatg tggtggcgat tgaagtacca
    27121 tcgctgcggc aacggcggga agatatccct ctgctggctg gccattttct gcagcgcttt
    27181 gccgagcgta atcgcaaggc ggtaaaaggt tttacgcccc aggcgatgga tctgttgatt
    27241 cattacgact ggccgggaaa tattcgtgag ctggaaaacg cggtggaacg ggcagtggtg
    27301 ctgctgccgg ggaatatatt tccgaacgcg agctgccgct ggcgattgcc agtacgccga
    27361 tcccgctggg gcaaagtcag gatattcagc cgctggtgga agtggaaaaa gaggtgattc
    27421 tggcggcact ggagaaaacg ggcggcaaca aaactgaagc cgcccgtcag ttagggatca
    27481 cgcgtaaaac gttattggca aaactgtcgc gttagttctg ctcgcgttcg atagcacgcc
    27541 agccgatatc tttccggcag aagcagtcgt cccagtggat atcggtcatt aaggcatagg
    27601 cgcgtttctg cgcttctgcc acggtatgac ccagcgcggt gacgcacagt acgcgcccgc
    27661 cgttggtcac tacctgctcg tcatccgcca gttttgtgcc cgcgtggaac actttgccgc
    27721 ctgccacttc ttccagcagc aggccgtgga tcacgtcacc ggtgcggtaa tcacccggat
    27781 atccacccgc agccatcacc acgccgagag aagcgcgttc atcccactcg gacgttttct
    27841 cgtccagttt gctttcacag gccgccaggc agagctcaac cagatcggac ttcatgcgca
    27901 gcataatcgg ctgggtttcc ggatcgccaa agcggcagtt aaattcaata accttcggat
    27961 tgccctgttt gtcgatcatc aggcccgcgt agagaaaacc ggtgtaggtg ttgccttccg
    28021 ccgccatgcc tttcacggtt ggccagataa tacgttccat ggtgcgctga tgaacgtcat
    28081 cggttactac cggcgcgggg gagtaagcgc ccatcccgcc ggtgtttggt ccggtatctt
    28141 tatcgcctac gcgtttgtga tcctggctgg tagccatcgg cagcacatgc tcgccgtcca
    28201 ccatcacgat aaagctcgct tcttcgccat cgaggaactc ttcgataacg atgcgatgac
    28261 ccgcgtcgcc aaaagcgttg cccgccagca tatcgtgaac agccgcttcc gcttcttcca
    28321 gcgtcatcgc cacgataacg cctttcccgg cagccagacc gtccgcttta atgacgattg
    28381 gcgcgccttt ctcacgcaga tacgccagcg caggttctac ctcggtgaag ttctggtatt
    28441 ccgccgtagg gatcttatgg cgggccagga aatctttggt aaacgctttt gagccttcca
    28501 gttgggccgc acctgcggtt gggccgaaga ttttcagccc ggcggcgcgg aaggtatcga
    28561 ccacgccttt caccagcggc gcttccgggc cgacgatggt cagatcaatc ttttcgtttt
    28621 gtgcgaaatc caacagcgcc gggatatcgg tcacgccaat agcaacgttt tgcagcgcgg
    28681 gttccagcgc agtgcctgca ttacccggag caacaaaaac agtctcaacc agcggcgact
    28741 gggccgcttt ccaggccagc gcgtgctcgc gcccgccgtt accaatcact aatactttca
    28801 tctattgctc cattaatggc ggaagtggcg catgtcggtg aagagcatcg caataccgtg
    28861 ctcgtcggcg gcggcaatca cttcgtcatc acggatggaa ccgccaggct ggattacgca
    28921 ggtcacgccc gcagcggcgg cggcatcaat accgtcgcgg aacgggaaga acgcgtcaga
    28981 agccatcgag gaacctttca cttccaggcc ttcatcggca gctttaatac cggcgatttt
    29041 cgcggagtac acgcggctca tctggcccgc gccaataccg atggtcatat tgtttttggc
    29101 atagacgata gcattggatt tcacgaactt cgccactttc cagcagaaca gcgcatcgcg
    29161 cagttcctgt tcggtcggct gacgttgggt gacgacgcgc agttcttccg caccgaccat
    29221 ccccaggtca cgatcctgaa ccagcagacc gccgttcacg cgtttgaaat caagacccgg
    29281 aacacgctcg ccccactgac cgcaggtcag aacgcgtacg ttctgcttgg cggcggtgat
    29341 tttcagggct tcttcgctgg cggaaggcgc aataatcact tcgacaaact gacgagaaat
    29401 gatggcctgt gcggtttccg catctagctc gcggttaaag gcaatgatgc cgccgaatgc
    29461 ggaggttggg tcggttttgt acgcgcgatc gtaagcatca agaatggaat tgccgatagc
    29521 tacaccgcaa gggttggcgt gcttcacaat cacacatgcc ggctcggcga actctttcac
    29581 gcactccagc gccgcatcgg tatcggcgat gttgttataa gagagggctt taccctgaac
    29641 ctgggttgcg gtagcaacgg aggcttcttt cacattctct tctatataga aggcagcctg
    29701 ctggtggctg ttctcgccgt aacgcatatc ctgcttctta atgaagttca ggttcagcgt
    29761 gcgtgggaag cgaccggcgg cttctttgct ttcaccgtgg tacgccggaa ccatgctgcc
    29821 gaagtagttg gcaatcatgc tgtcgtaggc ggcagtgtgt tcgaaggctt tgatggcgag
    29881 gtcgaaacgg gttgcaagcg tcagcgatcc ttcgttgtca tccatctctt taataatggc
    29941 gtcgtagtcg ctgctcttca ccacgattgc gacatcttta tggttcttag cggcggagcg
    30001 caccatggtc gggccgccga tatcgatgtt ctcaaccgca tcttccagcg agcagccttc
    30061 acgagcaaca gtctgggcga acggatacag gttaacaacc accatatcga taggctggat
    30121 ctgatgttct tccataatgg catcgtcctg gccgcgacgg cccagaatgc caccatgtac
    30181 tttcggatgc agggtcttca cgcgtccatc catcatctcc gggaaaccgg tgtaatcgga
    30241 aacttcggtt accggcagac ctttttctgc taacagacgg gcagtgcccc ctgtagacag
    30301 cagctccaca ccgcgtgcgg aaagtgcctg ggcgaattcg acgataccgg ctttgtcaga
    30361 aacactgagc agagcgcggc ggactggacg acgttgttgc atggtaaatc ccctggattt
    30421 gactattaca gagagcgtta gctgaatttt tcgcgaaaaa ctcagctaac gcccctaacg
    30481 gggcatcctt atttttcgcc cgcattgtaa cgaaaacgtt tgcgcaacgc tcgcgaattt
    30541 ttctctttca atggtgatca caattttgac agtggctacc gtgggaaaaa tacagaaatt
    30601 acattgatga ttgtggataa ctctgtgcgt aaaaaggtat aaagcggggt tttgctgggg
    30661 aatgcagcag tcagtcattt ttctgcaatt tttctattgc ggcctgcgga gaactcccta
    30721 taatgcacct ccatcgacac ggcggatgtg aatcacttca cacaaacagc cggttcggtt
    30781 gaagagaaaa atcctgaaat tcagggttga ctctgaaaga ggaaagcgta atatacgcca
    30841 cactcacgac agtgcgctaa agctcgtcgc
//
LOCUS       DADMJE010000033        30292 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.034, whole genome shotgun sequence.
ACCESSION   DADMJE010000033 DADMJE010000000
VERSION     DADMJE010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 30292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30292
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.034"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..867)
                     /locus_tag="JN001_001336"
                     /pseudo
     CDS             complement(1..867)
                     /locus_tag="JN001_001336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310631.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
     gene            complement(842..1642)
                     /gene="otsB"
                     /locus_tag="JN001_001337"
                     /pseudo
     CDS             complement(842..1642)
                     /gene="otsB"
                     /locus_tag="JN001_001337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416411.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
     gene            complement(1809..2798)
                     /locus_tag="JN001_001338"
     CDS             complement(1809..2798)
                     /locus_tag="JN001_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter permease AraH"
                     /protein_id="HAY9052626.1"
                     /translation="MMSSVSTSGSGAPKSSFSFGRIWDQYGMLVVFAVLFIACAIFVP
                     NFATFINMKGLGLAISMSGMVACGMLFCLASGDFDLSVASVIACAGVTTAVVINLTES
                     LWIGVAAGLLLGILCGLVNGFVIAKLKINALITTLATMQIVRGLAYIISDGKAVGIED
                     ESFFALGYANWFGLPAPIWLTVACLIIFGLLLNKTTFGRNTLAIGGNEEAARLAGVPV
                     VRTKIIIFVLSGLVSAIAGIILASRMTSGQPMTSIGYELIVISACVLGGVSLKGGIGK
                     ISYVVAGILILGTVENAMNLLNISPFAQYVVRGLILLAAVIFDRYKQKAKRTV"
     gene            complement(2810..4324)
                     /locus_tag="JN001_001339"
     CDS             complement(2810..4324)
                     /locus_tag="JN001_001339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose ABC transporter ATP-binding protein
                     AraG"
                     /protein_id="HAY9052627.1"
                     /translation="MQQSTPYLSFRGIGKTFPGVKALTDISFDCYAGQVHALMGENGA
                     GKSTLLKILSGNYAPTTGSVVINGQEMSFSDTTAALNAGVAIIYQELHLVPEMTVAEN
                     IYLGQLPHKGGIVNRSLLNYEAGLQLKHLGMDIDPDTPLKYLSIGQWQMVEIAKALAR
                     NAKIIAFDEPTSSLSAREIDNLFRVIRELRKEGRVILYVSHRMEEIFALSDAITVFKD
                     GRYVKTFTDMQQVDHDALVQAMVGRDIGDIYGWQPRSYGEERLRLDAVKAPGVRTPIS
                     LAVRSGEIVGLFGLVGAGRSELMKGLFGGTQITAGQVYIDQQPIDIRKPSHAIAAGMM
                     LCPEDRKAEGIIPVHSVRDNINISARRKHVLGGCVINNGWEENNADQHIRSLNIKTPG
                     AEQLIMNLSGGNQQKAILGRWLSEEMKVILLDEPTRGIDVGAKHEIYNVIYALAAQGV
                     AVLFASSDLPEVLGVADRIVVMREGEIAGELLHEQADERQALSLAMPKVSQAVA"
     gene            complement(4394..5382)
                     /locus_tag="JN001_001340"
                     /pseudo
     CDS             complement(4394..5382)
                     /locus_tag="JN001_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001397210.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="arabinose ABC transporter substrate-binding
                     protein"
     gene            6096..6599
                     /locus_tag="JN001_001341"
     CDS             6096..6599
                     /locus_tag="JN001_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin-like protein"
                     /protein_id="HAY9052628.1"
                     /translation="MATAGMLLKLNSQMNREFYASNLYLHLSNWCSEQSLNGTATFLR
                     AQAQSNVTQMMRMFNFMKSVGATPIVKAIDVPGEKLNSLEELFQKTMEEYEQRSSTLA
                     QLADEAKELNDDSTVNFLRDLEKEQQHDGLLLQTILDEVRSAKLAGMCPVQTDQHVLN
                     VVSHQLH"
     gene            complement(6678..6929)
                     /locus_tag="JN001_001342"
     CDS             complement(6678..6929)
                     /locus_tag="JN001_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416416.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2766 domain-containing protein"
                     /protein_id="HAY9052629.1"
                     /translation="MSQPLNADQELVSDVVACQLVIKQILDVLDVIAPVEVREKMSSQ
                     LKNIDFSNHPAAADPVTMRAIQKAIALIELKFTPQGESH"
     gene            complement(7044..7130)
                     /gene="azuC"
                     /locus_tag="JN001_001343"
     CDS             complement(7044..7130)
                     /gene="azuC"
                     /locus_tag="JN001_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein AzuC"
                     /protein_id="HAY9052630.1"
                     /translation="MKLRKILKSMFNNYCKTFKDVPPGNMFR"
     gene            7393..7716
                     /locus_tag="JN001_001344"
     CDS             7393..7716
                     /locus_tag="JN001_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052631.1"
                     /translation="MRLLILTLSLITLAGCTVTRQAHVSEVDAATGIVRLVYDQAFLQ
                     HAHTDRYVSRGIADRACQQEGYTHAIPFGQPVGNCSLFAGSLCLNTEFTLSYQCHHSA
                     FPVFL"
     gene            7887..8384
                     /gene="ftnA"
                     /locus_tag="JN001_001345"
     CDS             7887..8384
                     /gene="ftnA"
                     /locus_tag="JN001_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme ferritin"
                     /protein_id="HAY9052632.1"
                     /translation="MLKPEMIEKLNEQMNLELYSSLLYQQMSAWCSYHTFEGAAAFLR
                     RHAQEEMTHMQHLFDYLTDTGNLPRINTVESPFAEYSSLDELFQETYKHEQLITQKIN
                     ELAHAAMTNQDYPTFNFLQWYVSEQHEEEKLFKSIIDKLSLAGKSGEGLYFIDKELST
                     LDTQN"
     gene            complement(8422..8661)
                     /locus_tag="JN001_001346"
     CDS             complement(8422..8661)
                     /locus_tag="JN001_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YecH family protein"
                     /protein_id="HAY9052633.1"
                     /translation="MDSIHGHEVLNMMIESGEQYTHASLEAAIKARFGEQARFHTCSA
                     EGMTAGELVAFLAAKGKFIPSKDGFSTDQSKICRH"
     gene            8852..10063
                     /gene="tyrP"
                     /locus_tag="JN001_001347"
     CDS             8852..10063
                     /gene="tyrP"
                     /locus_tag="JN001_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine transporter TyrP"
                     /protein_id="HAY9052634.1"
                     /translation="MKNRTLGSVFIVAGTTIGAGMLAMPLAAAGVGFSVTLILLIGLW
                     ALMCYTALLLLEVYQHVPADTGLGTLAKRYLGRYGQWLTGFSMMFLMYALTAAYISGA
                     GELLASSISDWTGISMSATAGVLLFTFVAGGVVCVGTSLVDLFNRFLFSAKIIFLVVM
                     LVLLLPHIHKVNLLTLPLQQGLALSAIPVIFTSFGFHGSVPSIVSYMDGNVRKLRRVF
                     ITGSAIPLVAYIFWQVATLGSIDSTTFMGLLANHAGLNGLLQALREMVASPHVELAVH
                     LFADLALATSFLGVALGLFDYLADLFQRSNTVGGRLQTGAITFLPPLAFALFYPRGFV
                     MALGYAGVALAVLALIIPSLLTWQSRKHNPQAGYRVKGGRPALVVVFLCGIAVIGVQF
                     LIAAGLLPEVR"
     gene            complement(10125..10790)
                     /gene="yecA"
                     /locus_tag="JN001_001348"
     CDS             complement(10125..10790)
                     /gene="yecA"
                     /locus_tag="JN001_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0149 family protein YecA"
                     /protein_id="HAY9052635.1"
                     /translation="MKTGPLNESELEWLDDILTKYNTNHAILDVAELDDLLTAVLSSP
                     QEIEPEQWLVAVWGGADYVPRWASEKEMTRFMNLAFQHMADTAERLNEFPEQFEPLFG
                     LREVDGSELTIVEEWCFGYMRGVALSDWSTLPDSLKPALEAIALHGTEENFERVEKMS
                     PEAFEESVDAIRLAALDLHAYWMAHPQEKAVQQPIKAEEKPGRNDPCPCGSGKKFKQC
                     CLH"
     gene            complement(10986..11072)
                     /locus_tag="JN001_001349"
     tRNA            complement(10986..11072)
                     /locus_tag="JN001_001349"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11036..11038),aa:Leu,seq:taa)
     gene            complement(11085..11158)
                     /locus_tag="JN001_001350"
     tRNA            complement(11085..11158)
                     /locus_tag="JN001_001350"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11124..11126),aa:Cys,seq:gca)
     gene            complement(11213..11288)
                     /locus_tag="JN001_001351"
     tRNA            complement(11213..11288)
                     /locus_tag="JN001_001351"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(11253..11255),aa:Gly,seq:gcc)
     gene            complement(11440..11988)
                     /gene="pgsA"
                     /locus_tag="JN001_001352"
     CDS             complement(11440..11988)
                     /gene="pgsA"
                     /locus_tag="JN001_001352"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HAY9052636.1"
                     /translation="MQFNIPTLLTLFRVILIPFFVLVFYLPVTWSPFAAALIFCVAAV
                     TDWFDGFLARRWNQSTRFGAFLDPVADKVLVAIAMVLVTEHYHSWWVTLPAATMIARE
                     IIISALREWMAELGKRSSVAVSWIGKVKTTAQMVALAWLLWRPNIWVEYAGIALFFVA
                     AVLTLWSMLQYLSAARADLLDQ"
     gene            complement(12045..13877)
                     /gene="uvrC"
                     /locus_tag="JN001_001353"
     CDS             complement(12045..13877)
                     /gene="uvrC"
                     /locus_tag="JN001_001353"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310678.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HAY9052637.1"
                     /translation="MSDQFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLS
                     SYFRSNLASRKTEALVAQIQQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDKSY
                     PFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFPIRQCENSVYR
                     NRSRPCLQYQIGRCLGPCVEGLVSEEEYAQQVEYVRLFLSGKDDQVLTQLISRMETAS
                     QNLEFEEAARIRDQIQAVRRVTEKQFVSNTGDDLDVIGVAFDAGMACVHVLFIRQGKV
                     LGSRSYFPKVPGGTELSEVVETFVGQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLS
                     ELAGRKINVQTKPRGDRARYLKLARTNAATALTSKLSQQSTVHQRLTALASVLKLPEV
                     KRMECFDISHTMGEQTVASCVVFDANGPLRAEYRRYNITGITPGDDYAAMNQVLRRRY
                     GKAIDDSKIPDVILIDGGKGQLAQAKNVFAELDVSWDKNHPLLLGVAKGADRKAGLET
                     LFFEPEDEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRAKVKNTSSLETIEGVGP
                     KRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGLAEKIFWSLKH"
     gene            complement(13874..14530)
                     /gene="uvrY"
                     /locus_tag="JN001_001354"
     CDS             complement(13874..14530)
                     /gene="uvrY"
                     /locus_tag="JN001_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrY/SirA/GacA family response regulator
                     transcription factor"
                     /protein_id="HAY9052638.1"
                     /translation="MINVLLVDDHELVRAGIRRILEDIKGIKVVGEASCGEDAVKWCR
                     TNAVDVVLMDMSMPGIGGLEATRKIARSTADVKIIMLTVHTENPLPAKVMQAGAAGYL
                     SKGAAPQEVVSAIRSVYSGQRYIASDIAQQMALSQIEPEKTESPFASLSERELQIMLM
                     ITKGQKVNEISEQLNLSPKTVNSYRYRMFSKLNIHGDVELTHLAIRHGLCNAETLSSQ
                     "
     gene            14825..15001
                     /locus_tag="JN001_001355"
     CDS             14825..15001
                     /locus_tag="JN001_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052639.1"
                     /translation="MIKIFIGHYINVFYSTADITLKKQPLLFLAKLMVYSAALTFFTA
                     NFHCNMTRKINEYA"
     gene            14988..15212
                     /locus_tag="JN001_001356"
     CDS             14988..15212
                     /locus_tag="JN001_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2594 family protein"
                     /protein_id="HAY9052640.1"
                     /translation="MSTPDFSTAENNQELANEVSCLKAMLTLMLQAMGQADAGRVMLK
                     MEKQLALIEDETQAAVFSKTVKQIKQAYRQ"
     gene            complement(15279..16027)
                     /gene="sdiA"
                     /locus_tag="JN001_001357"
                     /pseudo
     CDS             complement(15279..16027)
                     /gene="sdiA"
                     /locus_tag="JN001_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310681.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator SdiA"
     gene            complement(16257..17009)
                     /gene="yecC"
                     /locus_tag="JN001_001358"
     CDS             complement(16257..17009)
                     /gene="yecC"
                     /locus_tag="JN001_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine ABC transporter ATP-binding protein
                     YecC"
                     /protein_id="HAY9052641.1"
                     /translation="MSAIEVKNLVKKFQGQTVLHGIDLEVKPGEVVAIIGPSGSGKTT
                     LLRSINLLEQPEAGTITVGDITIDTARSLSQQKSLIRQLRQHVGFVFQNFNLFPHRTV
                     LENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSYPRRLSGGQQQRVAIARALA
                     MRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMD
                     LGRIVEQGAAKALFADPQQPRTRQFLEKFLLQ"
     gene            complement(17006..17674)
                     /gene="tcyL"
                     /locus_tag="JN001_001359"
     CDS             complement(17006..17674)
                     /gene="tcyL"
                     /locus_tag="JN001_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter permease"
                     /protein_id="HAY9052642.1"
                     /translation="MQESIQLVIDSLPFLLKGAGYTLQLSIGGMFFGLLLGFILALMR
                     LSPIWPVRWLARFYISIFRGTPLIAQLFMIYYGLPQFGIELDPILSAMIGLSLNTAAY
                     AAETLRAAISSIDKGQWEAAASIGMTPWQTMRRAILPQAARVALPPLSNSFISLVKDT
                     SLAATIQVPELFRQAQLITSRTLEVFTMYLAASLIYWIMATVLSTLQNHFENQLNRQE
                     REPK"
     gene            complement(17689..18675)
                     /gene="dcyD"
                     /locus_tag="JN001_001360"
     CDS             complement(17689..18675)
                     /gene="dcyD"
                     /locus_tag="JN001_001360"
                     /EC_number="4.4.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416429.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-cysteine desulfhydrase"
                     /protein_id="HAY9052643.1"
                     /translation="MPLHNLTRFPRLEFIGAPTPLEYLPRFSDYLGREIFIKRDDVTP
                     MAMGGNKLRKLEFLAADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCVALLENP
                     IGTTAENYLTNGNRLLLNLFNTQIEMCDTLTDPNAQLEELATRVEAQGFRPYVIPVGG
                     SNALGALGYVESALEIAQQCEGAVNISSVVVASGSAGTHAGLAVGLEHLMPESELIGV
                     TVSRSVADQLPKVVNLQQAIAKELELTASAEILLWDDYFAPGYGVPNDEGMEAVKLLA
                     RLEGILLDPVYTGKAMAGLIDGISQKRFKDEGPILFIHTGGAPALFAYHPHV"
     gene            complement(18780..19580)
                     /gene="tcyJ"
                     /locus_tag="JN001_001361"
     CDS             complement(18780..19580)
                     /gene="tcyJ"
                     /locus_tag="JN001_001361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9052644.1"
                     /translation="MKLAHLGRQALMGVMAVALVAGMSVKSFADEGLLNKVKERGTLL
                     VGLEGTYPPFSFQGDDGKLTGFEVEFAQQLAKHLGVEASLKPTKWDGMLASLDSKRID
                     VVINQVTISDERKKKYDFSTPYTISGIQALVKKGNEGTIKTAADLKGKKVGVGLGTNY
                     EEWLRQNVQGVDVRTYDDDPTKYQDLRVGRIDAILVDRLAALDLVKKTNDTLAVTGEA
                     FSRQESGVALRKGNEDLLKAVNDAIAEMQKDGTLQALSEKWFGADVTK"
     gene            complement(19668..20219)
                     /gene="fliZ"
                     /locus_tag="JN001_001362"
     CDS             complement(19668..20219)
                     /gene="fliZ"
                     /locus_tag="JN001_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310687.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliZ"
                     /protein_id="HAY9052645.1"
                     /translation="MMVQHLKRRPLSRYLKDFKHSQAHCAHCRKLLDRITLVRDGKIV
                     NKIEISRLDTLLDENGWQVEQQSWAALCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEM
                     SPGTVREYVVRLRRLGNHLHEQNISLDQLQDGFLDEILAPWLPTTSTNNYRIALRKYQ
                     HYQRQTCTGLVQKSSSLPASDIY"
     gene            complement(20265..20984)
                     /locus_tag="JN001_001363"
     CDS             complement(20265..20984)
                     /locus_tag="JN001_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor FliA"
                     /protein_id="HAY9052646.1"
                     /translation="MNSLYTAEGVMDKHSLWQRYVPLVRHEALRLQVRLPASVELDDL
                     LQAGGIGLLNAVERYDALQGTAFTTYAVQRIRGAMLDELRSRDWVPRSVRRNAREVAQ
                     AIGQLEQELGRNATETEVAERLGIDIADYRQMLLDTNNSQLFSYDEWREEHGDSIELV
                     TDDHQRENPLQQLLDSNLRQRVMEAIETLPEREKLVLTLYYQEELNLKEIGAVLEVGE
                     SRVSQLHSQAIKRLSTKLGKL"
     gene            complement(21304..23010)
                     /locus_tag="JN001_001364"
     CDS             complement(21304..23010)
                     /locus_tag="JN001_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellin FliC"
                     /protein_id="HAY9052647.1"
                     /translation="MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRINSAKDD
                     AAGQAIANRFTSNIKGLTQAARNANDGISVAQTTEGALSEINNNLQRILELTVQASTG
                     TNSDSDLDSIQDEIKSRLDEIDRVSGQTQFNGVNVLAKDGSMKIQVGANDGQTITIDL
                     KKIDSDTLGLNGFNVNGKGTIANKAATVSDLTAAGATGTGPYAVTTNNTALSASDALS
                     RLKTGDTVTTTGSSAAIYTYDAAKGNFTTQATVADGDVVNFANTLKPAAGTTASGVYT
                     RSTGDVKFDVDANGDVTIGGKAAYLDATGNLSTNNAGIASSAKLSDLFASGSTLATTG
                     SIQLSGTTYNFGAAATSGVTYTKTVSADTVLSTVQSAATANTAVTGATIKYNTGIQSA
                     TASFGGANTNGAGNSNDTYTDADKELTTTASYTINYNVDKDTGTVTVASNGAGATGKF
                     AATVGAQAYVNSTGKLTTETTSAGTATKDPLAALDEAISSIDKFRSSLGAIQNRLDSA
                     VTNLNNTTTNLSEAQSRIQDADYATEVSNMSKAQIIQQAGNSVLAKANQVPQQVLSLL
                     QG"
     gene            23276..24682
                     /gene="fliD"
                     /locus_tag="JN001_001365"
     CDS             23276..24682
                     /gene="fliD"
                     /locus_tag="JN001_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar filament capping protein FliD"
                     /protein_id="HAY9052648.1"
                     /translation="MASISSLGVGSGLDLSSILDSLTAAQKATLTPISNQQSSFTAKL
                     SAYGTLKSALTTFQTANTALSKADLFSATSTTSSTTAFSATTAGNAIAGKYTISVTHL
                     AQAQTLTTRTTRDDTKTAIATSDSKLTIQQGGDKDPITIDISAANSSLSGIRDAINNA
                     KAGVSASIINVGNGEYRLSVTSNDTGLDNAMTLSVSGDDALQSFMGYDASASSNGMEV
                     SVAAKNAQLTVNNVAIENSSNTISDALENITLNLNDVTTGNQTLTITQDTSKAQTAIK
                     DWVNAYNSLIDTFSSLTKYTAVDAGADSQSSSNGALLGDSTLRTIQTQLKSMLSNTVS
                     SSSYKTLAQIGITTDPSDGKLELDADKLTAALKKDASGVGALIVGDGKKTGITTTIGS
                     NLTSWLSTTGIIKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKKQFTQLDVLMTSL
                     NSTSSYLTQQFENNSNSK"
     gene            24707..25117
                     /gene="fliS"
                     /locus_tag="JN001_001366"
     CDS             24707..25117
                     /gene="fliS"
                     /locus_tag="JN001_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar export chaperone FliS"
                     /protein_id="HAY9052649.1"
                     /translation="MYAAKGTQAYAQIGVESAVMSASQQQLVTMLFDGVLSALVRARL
                     FMQDNNQQGKGVSLSKAINIIENGLRVSLDEESKDELTQNLIALYSYMVRRLLQANLR
                     NDVSAVEEVEALMRNIADAWKESLLSPSLIQDPV"
     gene            25117..25483
                     /gene="fliT"
                     /locus_tag="JN001_001367"
                     /pseudo
     CDS             25117..25483
                     /gene="fliT"
                     /locus_tag="JN001_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001015018.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulatory protein FliT"
     gene            25561..27048
                     /gene="amyA"
                     /locus_tag="JN001_001368"
     CDS             25561..27048
                     /gene="amyA"
                     /locus_tag="JN001_001368"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY9052650.1"
                     /translation="MRNPTLLQCFHWYYPEGGKLWPELAERADGFNDIGINMVWLPPA
                     YKGASGGYSVGYDSYNLFDLGEFDQKGSIPTKYGDKVQLLAAIDALKRNDIAVLLDVV
                     VNHKMGADEKEAIRVQRVNADDRTQIDEEIIECEGWTRYTFPARAGQYSQFIWDFKCF
                     SGIDHIENPDEDGIFKIVNDYTGEGWNDQVDDELGNFDYLMGENIDFRNHAVTEEIKY
                     WARWVMEQTQCDGFRLDAVKHIPAWFYKEWIEHVQEVAPKPLFIVAEYWSHEVDKLQT
                     YIDQVEGKTMLFDAPLQMKFHEASRMGRDYDMTQIFTGTLVEADPFHAVTLVANHDTQ
                     PLQALEAPVEPWFKPLAYALILLRENGVPSVFYPDLYGAHYEDVGGDGQTYPIDMPII
                     EQLDELILARQRFAHGVQTLFFDHPNCIAFSRSGTDEYPGCVVVMSNGDDGEKTIHLG
                     ENYGNKTWRDFLGNRQESVITDEHGEATFFCNGGSVSVWVIEEVI"
     gene            complement(27082..27495)
                     /locus_tag="JN001_001369"
     CDS             complement(27082..27495)
                     /locus_tag="JN001_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310694.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9052651.1"
                     /translation="MKKLAIAGALMLLAGCAEVENYNNVVKTPAPDWLAGYWQTKGPQ
                     RALVSPEAIGSLIVTKEGDTLDCRQWQRVIAVPGKLALMSDDLTNVTVKRELYEVERD
                     GNTIEYDGMTMERVDRPTAECAAALDKAPLPTPLP"
     gene            27682..28887
                     /gene="yedE"
                     /locus_tag="JN001_001370"
     CDS             27682..28887
                     /gene="yedE"
                     /locus_tag="JN001_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenium metabolism membrane protein YedE/FdhT"
                     /protein_id="HAY9052652.1"
                     /translation="MSWQQFKHAWLIKFWAPIPAVIAAGILSTYYFGITGTFWAVTGE
                     FTRWGGQLLQLFGVHAEEWGYFKIIHLEGSPLTRIDGMMILGMFGGCFAAALWANNVK
                     LRMPRSRIRIMQAIIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFAIATAIGSW
                     FGARFTLLPIFRIPVKMQKVSAASPLTQKPDQARRRFRLGMLVFFGMLGWALLTAMNQ
                     PKLGLAMLFGVGFGLLIERAQICFTSAFRDMWITGRTHMAKAIIIGMAVSAIGIFSYV
                     QLGVEPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQVHYWWVGLGNVIGS
                     TILAYYWDDFAPALATDWDKINLLKTFGPMGGLLVTYLLLFTALMLIIGWEKRFFRRA
                     APQTAKEIA"
     gene            28884..29117
                     /gene="yedF"
                     /locus_tag="JN001_001371"
     CDS             28884..29117
                     /gene="yedF"
                     /locus_tag="JN001_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase-like selenium metabolism
                     protein YedF"
                     /protein_id="HAY9052653.1"
                     /translation="MKNIVPDYRLDMVGEPCPYPAVATLEAMPQLKKGEILEVVSDCP
                     QSINNIPLDARNHGYTVRDIQQDGPTIRYLIQK"
     gene            29224..29895
                     /locus_tag="JN001_001372"
     CDS             29224..29895
                     /locus_tag="JN001_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016245363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SOS response-associated peptidase"
                     /protein_id="HAY9052654.1"
                     /translation="MCGRFAQSQTREDYLALLAEDIERDIPYDPEPIGRYNVAPGTKV
                     LLLSERDEHLHLDPVFWGYAPGWWDKPPLINARVETAATSRMFKPLWQHGRAICFADG
                     WFEWKKEGDKKQPFFIYRADGQPIFMAAIGSTPFEHGDEAEGFLIVTAAADQGLVDIH
                     DRRPLVLSPEAAQEWMRQEIGGKEASEIATNGCVPANQFTWHPVSRAVGNVKNQGAEL
                     IQPVC"
     gene            complement(29935..>30292)
                     /locus_tag="JN001_001373"
     CDS             complement(29935..>30292)
                     /locus_tag="JN001_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001458895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9052655.1"
                     /translation="PGRNVRAKSGLNRSILDQGWYEMRRQLEYKQLWRGGQVFAVPPA
                     CTSQRCACCGHTAKENRLSQSKFRCQVCGYTANADVNGARNILAAGHAVLACGEMVQS
                     GRPLKQEPTEMIQATA"
BASE COUNT         7519 a         7798 c         7260 g         7715 t
ORIGIN      
        1 taacgaattt taccatgatg ctgcggatat ttttccagca acgcttcata ggcgagaaaa
       61 cgctctggca aacctttgga ataatccagc cgttcgacag aaaagatatt ttgtacgttt
      121 ttcagttccg ctttaagttg cgccagtttt ggcggcagtg gcccggcagc ctgtttggct
      181 atttctttcg gttcaatgcc gatcgggtag acttctgttc gaaatgcttt gccccaggct
      241 gtatggcttt ttgcgctacg tgtcgtgacg cgggtcaggt tagaaagaca atccaggaac
      301 gccagacgat cgttttctgt ctggaaaccc agcaaatcat aatcacaaag ctgttcaagc
      361 aaggtgtcat atgtcggcag cgcgttgaag atttccggtg tcgggaaagg aatatgcaga
      421 aagaaaccaa tgcgattatt caccccacgt ttgcgtaatt catgcgcaaa gggcaacagg
      481 tgataatcgt ggatccagat aatgtcatcg tcttgcaaca gcggcagtaa tttatctgcc
      541 agcaacgcat ttacgcgtag atagccgtcc caggcaggac gctgaaattg catcagatcg
      601 agccgataat gaaaagcggg ccagagaacg gcattggaga attggttgta gtattcgtca
      661 aggtcctgtt cgctgaggtt aaaagaggcc cacgtagtgt tacctttttt agcggctgat
      721 cccattccct gtttcaccac tccagccaaa ccacagtccg cctgtggctt tcagtgcccc
      781 cagtatgcca acggcaaggc caccggcact ggcggcgtgc tcgtctggtg gtgcaatccg
      841 gttagatact acgactaaac gactcatagt catcactcct gttattttct cttttttgtt
      901 gtaatgcggt ggttatcatt tcaagcctgc tccagacatc cggcacaccc gccagtcgcc
      961 atgatgcctg agttgcacct gtgccaattt ttactgacat tccgcccagt cggttaacga
     1021 ctgcgaagcc agattcatcg gttaaatcat cgcccagaaa tacgggcgtt cgcccgataa
     1081 agggagcttc ctgcataaaa gctgcaattg cctcaccttt actggtacct ctcggtttga
     1141 tctcgacaac acactttccc tgctgtaacg ccatttgtgg ccagatctga gtaatacgtt
     1201 acgctaatgt cattaatgcg tcttcatgct gcggagcctg acgataatgc agcgcaaaag
     1261 ccatcccttt cgcctccagc tccgcgccgg gatactgagc gataactgta tgcagttgca
     1321 cgctaatatc acgcgcaatc gcatccggca gatgaacgat atgcgtttta ccattgatgt
     1381 cacggcgctc cgccccatgc acgcccgcta acgggaagcg ataaggtttt gccagtgcgt
     1441 caagctccac cattgagcgc cctgatatca atgccaatgc accatcactt gcggttgcca
     1501 gtagctgtag tccttgcaga atattgtcag gcacgacgac ctgatcggga tgcggtttga
     1561 tttccgccag cgttccatcg agatcaaaaa accaggcata tttcgcggat agttcagggg
     1621 tttcggttaa cggttctgtc acccggttct cctacttctc ttttcttatt gttttgcgca
     1681 gaacgcgctt tacagacatg taagtataga cagtgtgacg ggggtcgcca tttgcaacga
     1741 agaacagcca accgttatgg cggttggctg tggtgggaaa aaacgctaaa ttgttgcaga
     1801 aaaaagcatc agacagtgcg tttcgctttt tgcttgtaac ggtcgaagat caccgctgcc
     1861 agcaggatta agccgcgaac cacgtactgc gcgaaaggag aaatattaag caggttcatg
     1921 gcgttttcca cggtgcctaa aattaagata cccgccacca catatgagat ttttccgatg
     1981 cctcctttca gagaaacgcc acctaaaacg caggcggaga taacaatcag ctcgtaacca
     2041 atcgacgtca ttggctgccc actggtcata cgtgaagcca gaataattcc ggctatcgca
     2101 gataccaggc cagagagaac aaagataata attttggtgc gaacaaccgg tacacccgcc
     2161 agacgcgcag cctcttcgtt cccgccaatc gccagggtgt tacgaccaaa ggtggtttta
     2221 ttcagcaaca aaccaaagat aatcagacac gcgacggtga gccagattgg cgcaggcaga
     2281 ccgaaccagt tagcgtaacc aagggcaaag aagctttcat cttcgatacc gaccgcttta
     2341 ccgtctgaaa tgatgtacgc cagacctcga acaatctgca tcgttgccag tgttgtgatc
     2401 agagcattta ttttcagttt ggcgataaca aagccattga ccaggccaca gagaatgcca
     2461 agcagcaacc ccgctgccac gccaatccac aggctttcag tcaggttgat aaccaccgcc
     2521 gtggtgacac ccgcacaggc aattacggag gcgacagaaa ggtcaaagtc accggaagca
     2581 aggcagaaca acatgccaca cgccaccatc cccgacatgg aaattgccag gcccaaccct
     2641 ttcatattaa tgaaggtggc aaaatttggg acaaaaatgg cacaggcgat aaagagcacc
     2701 gcaaacacca ccagcatgcc gtactgatcc cagatacgcc cgaagctgaa tgacgactta
     2761 ggtgcgccag aacccgatgt agaaacagaa gacatcatac tctccttact caggcaactg
     2821 cctggctgac tttaggcatc gcaaggctca gtgcctgacg ctcatctgcc tgctcgtgta
     2881 acaattcacc ggcgatttca ccttcccgca tcaccacaat ccggtcggca acgccgagga
     2941 cttcaggtaa gtcgctggag gcaaacagca ccgccacacc ctgcgccgcc agcgcataaa
     3001 ttacgttata tatttcgtgc ttagcaccaa catcaatgcc gcgcgtaggt tcatccagca
     3061 aaatgacctt catctcttcc gataaccagc ggcccagaat ggctttttgc tgatttccgc
     3121 ctgagagatt catgatcagt tgctcagcgc ccggcgtttt gatgttgagc gaacgaatgt
     3181 gctgatcggc attgttttct tcccaaccgt tgttgattac acaaccgccg agcacatgtt
     3241 tgcgtctggc actgatgttg atattgtcgc gaacggagtg cacgggaata atgccttccg
     3301 ctttgcgatc ttccgggcag agcatcatgc ctgcggcaat ggcgtggctc ggtttacgaa
     3361 tatcgatcgg ctgttggtcg atataaacct gaccggcggt gatttgcgtc ccgccaaaca
     3421 agcctttcat taattcgcta cgccccgccc ctaccagacc aaacagccca acaatttcac
     3481 cactgcgaac cgccagactt attggcgtac gcacgcctgg tgctttcaca gcatcaagac
     3541 gcaggcgctc ctcgccataa ctacgaggtt gccagccgta gatatcgcca atgtcgcgcc
     3601 cgaccatcgc ctgcaccagc gcgtcgtggt caacctgctg catatcggta aaggttttga
     3661 cataacgtcc atctttaaag acagtgatgg catcgctgag ggcaaatatt tcttccatac
     3721 ggtgagaaac gtataagatc acccgcccct cttttcgcag ttcacgaata acgcggaaaa
     3781 gattgtcgat ttcgcgggca gaaagggagc tggttggctc atcaaaggcg ataattttag
     3841 cgttacgcgc cagcgccttg gcgatttcaa ccatctgcca ctgaccaatg gagagatatt
     3901 tcagcggcgt gtccgggtca atatccatac caagatgttt aagttgtaaa cccgcctcat
     3961 aattcagcaa tgagcgattc acaatgccgc ctttatgcgg cagctggccg agatagatgt
     4021 tttccgcgac ggtcatttcc ggcacgagat gcagttcctg gtaaataatc gccacacccg
     4081 cgttaagtgc tgcggtcgtg tcggaaaagg acatttcctg cccattaatc actacagaac
     4141 ccgtggttgg cgcatagttg ccgctgagga tttttaagag agttgatttt cctgcgccat
     4201 tttcacccat caacgcatga acctgaccgg catagcagtc aaaactaata tccgtcagcg
     4261 ccttaacgcc gggaaacgtt ttaccgatgc cgcgaaatga gagatacggg gtagactgtt
     4321 gcataacgtc tccgtgaatc actggtcgtt cacaccccct ctgcatcatg cagaggggaa
     4381 tttttccggc aaattactta ccgcctaaac cttttttctc cagttcttct ttaaagttgt
     4441 cacgcgtgat cagcaccacg tcggtaactt cggtaaattt tggcggttca acgtcttttg
     4501 ctacccagtt gtaaagcatt tcgctggatt tatagccatg tacgtccggg cttggcagca
     4561 gggaaccgta gaagccggtt gcctgtactt tagacagttc gctcaccgca tccacaccgt
     4621 taatgccaat gccgataata tcggcagctt taaagccctg accttccgtc gcgcgtacgc
     4681 cgcccagcac ggtgctgtcg ttcataccga cgatcagcca atgtttaact tcaggatgtt
     4741 gaaccagcat tgagttggca gcgtcaaatg cccccgggat gtcgttagat ttggtaggta
     4801 cctgataaat ttgtttttcc gggaatccgg ccgctttcag cgcatccata gatcccgtag
     4861 tacggcggcg ggcagtatcc agttcgttgg cggtaatcac catcaccgcg ctttctttga
     4921 catcccagcc acgtttctgc atctctttat acagttcctg accctgacgt tcgccaattt
     4981 tagtcgcgcc atcatcacca gcggaacggt atccattggc ttacctttgg cgttaacaaa
     5041 ctgatcatcc acggcaatga ctttcatatc gtagccacgc gctttcgcga cgatggcaga
     5101 gccgagtttg gggtccggag tacaaataac gaaacctttt gcgccactgg cagccaggct
     5161 gtcgatcgcg ttcaatgttt tttcgccatc cggcacggca atcttaataa cctcaaaccc
     5221 taaatccttc ccggctttat cggcaaactt ccattcggtc tggaaccacg gctcttccgg
     5281 ttgcttcacc agaaaaccga gcttcaggtt ctccgccata gcggattgtg acataacggc
     5341 tgccagacca atggctgcca gggctttagt aaatttgtgc atggttctct ccagctttag
     5401 tgtcgttttg tgtagggcaa aaacgaatga cattcgttaa attaatcgga aaacaaagca
     5461 ttacctttta actaaaagat aagtgaccgt gttgacatag ttttagcgag aaattaattc
     5521 tccataggag agcaatatca catcgcagaa ttacagtgag aacgtgcata aatttagcgg
     5581 gaaaagacat aagggaaagc caatttgtca gacaaattgt cgaatgcaca gcagattaat
     5641 ccataagatt agcttggaaa tccttgttgt ctttggtacc catgcgggat gtcttctttt
     5701 taaccagtca ataggccgca ttacctggcg ttgagttttt gaaatggtgt aataaccgca
     5761 actcaaagat gtggaaaatg cacgtcattc atttcgccat taattatcac tgtgctcatt
     5821 aattaacaga acacgtataa tgagagccat ctcgcaaaaa tgaaaaaacg ttttataaaa
     5881 tcatcatttc atcaatgaaa tgtaaaaata tataaacttg atgatttaag cattttctta
     5941 tacccgttca gacgttattc ttatttcaga tcatcgtcag aattgactcc acgatcacat
     6001 ttcggaccgg cagaaaggaa ttattctgca aacagtaatt atggtgtttt gatttatctt
     6061 gcacctctcc acttctggat ataaggatat taggtatggc aaccgctgga atgcttctca
     6121 aactcaactc tcaaatgaac cgcgagtttt acgcatccaa tctctacctt cacctgagta
     6181 actggtgttc tgaacagagt ctgaacggca ccgccacttt ccttcgcgcc caggcacaga
     6241 gtaatgtgac ccaaatgatg cgcatgttta actttatgaa gagtgtcggc gctaccccca
     6301 tcgttaaagc cattgatgtt cccggtgaaa aactgaactc tctggaagaa ctgttccaaa
     6361 aaacgatgga agaatacgag caacgttcta gtacgttggc acagttagcc gatgaagcga
     6421 aagaactgaa tgatgattca accgtcaatt tcctgcgcga tctggaaaaa gaacagcagc
     6481 atgatggtct gttgctgcaa accattcttg atgaagtgcg cagtgcgaaa cttgctggta
     6541 tgtgcccagt gcagaccgac caacatgttc tgaatgtcgt gtcgcatcag ctgcattgat
     6601 catacatcgg cgctaatgca ttgcgccgat gaagtttttg agaaaccgct gcctcatctt
     6661 tttgaagcag cggtttttta atgggattcg ccttgtgggg taaacttgag ttcaatcagc
     6721 gcgatggctt tttggattgc ccgcatggtg accgggtctg cggcggcggg atggttacta
     6781 aagtcgatat tcttcagctg actggacatt ttttcacgaa cttcaacggg cgcgattaca
     6841 tcgagaacat ccagaatttg tttgataacc aactggcaag caaccacatc agaaaccagt
     6901 tcctgatcgg cattcagcgg ctgggacatc gtaaactcct gatagcattt tgaaagccgt
     6961 tatagtagcg gcttcacatc ttcagcgata gtcacatcca ccgtcatcag gacacaaaaa
     7021 aacctgccgg agcaggtttt ttgttatcgg aacatattgc ctggcggtac gtctttgaac
     7081 gtcttgcaat agttattgaa catacttttc aggattttgc gcagtttcat cgcggcactc
     7141 cgaccatttg ttatacatgt gttattttct ttgtgcttat aatatgacaa ccatcacaaa
     7201 aatcaatctt tatgtgatgc aaatcacaca aataccccct taatgttata aaaatgataa
     7261 tcaaaaaaca gcccccccat ttctgacacc tacagatggc aagaaatagc gcctgccagg
     7321 cgtcttttcc ggtcattgtc gcagcgctgt aacgcgtaaa atagtgcttt cttttactct
     7381 tctggctgga ccatgagact tctgattctg actctttcat taataacgct ggcggggtgt
     7441 acggttactc gccaggccca tgtgagcgaa gttgacgcgg caacaggtat tgtacggttg
     7501 gtttatgacc aggctttttt gcagcatgcc cataccgatc gttatgtcag tcgcgggatc
     7561 gccgatcgcg catgccagca ggaaggctat acccacgcga tcccctttgg tcagccagta
     7621 ggcaactgta gcctttttgc gggttcctta tgtttgaata cggaattcac tttgtcatat
     7681 cagtgccatc attccgcctt ccctgtcttt ctctaaatat tttaatcagc gaggggatct
     7741 tcgctgatta aaaaaatagc ggtaatgcgt tttattccca ttcgtatttt taataattga
     7801 agtttatatt ttaccttttg caaataataa aataacaaat tatagtgacg ccacagcaac
     7861 aaatataacc tttgtggagc actatcatgc tgaaaccaga aatgattgaa aaacttaatg
     7921 agcagatgaa cctggaactg tactcttcac tgctttatca gcaaatgagc gcctggtgca
     7981 gctatcatac cttcgaaggt gctgccgcgt tcctgcgccg tcacgcccaa gaagagatga
     8041 cgcatatgca gcatctgttt gattacctga ctgataccgg caatttaccg cgtattaata
     8101 ccgttgaatc tccgtttgct gaatattcct cacttgatga attattccag gaaacctata
     8161 aacacgaaca attaatcacc cagaaaatta acgaactggc tcatgctgca atgaccaatc
     8221 aggactaccc aacatttaat ttcctgcaat ggtatgtttc tgagcagcat gaagaagaga
     8281 aactgttcaa atcgattatt gataaattaa gcctggcagg caaaagcggc gaaggtctgt
     8341 attttatcga caaagaactc tctaccctcg acacacaaaa ctaatactct ccggcggcag
     8401 gtttactgcc gccgtttcaa atcagtgacg gcaaatctta ctctgatcgg tcgaaaaacc
     8461 gtctttcgaa ggtataaatt tgccttttgc tgccagaaac gctaccagct ctcccgctgt
     8521 catcccttct gccgagcagg tgtgaaaacg tgcctgttca ccaaaacgcg ctttaattgc
     8581 tgcttccaga ctggcatgcg tatattgctc gcctgattca atcatcatat ttaacacttc
     8641 atgaccgtga atagagtcca tcgttcctcc tcaaaaaaag cctagcgtag cgattgccgc
     8701 ttatgaagac tttgcgccag agcagaactg aatgcttttt attgtacatt tatatttaca
     8761 ccatatgtaa cgtcggtttg acgaagcagc cgttatgcct taacctgcgc cgcagatatc
     8821 actcataaag atcgtcagga cagaagaaag cgtgaaaaac agaactctgg gaagtgtttt
     8881 tatcgtggcg ggaaccacaa ttggcgcagg catgctggca atgccgctgg ctgcggcagg
     8941 tgttggtttt agcgtcacgt taatcttgtt gattgggctt tgggcgttga tgtgctacac
     9001 ggcgctatta ctgctggagg tgtaccagca tgttccggca gataccggtc tgggcacgct
     9061 ggcaaaacgc tatctgggac gctacggtca atggctgacg ggcttcagta tgatgttctt
     9121 aatgtatgct ctgactgcgg catacatcag cggtgccggt gaattgttgg cctccagcat
     9181 cagcgactgg acaggtattt caatgtcggc aaccgctggc gtgctgttgt tcacttttgt
     9241 tgccggtggc gtggtttgtg ttggaacatc gctggtcgat ttatttaacc gttttctgtt
     9301 cagcgccaaa attatttttc tggtggtgat gctggtattg ctgctaccgc atattcacaa
     9361 agtgaatctt ttaaccctgc cgttgcaaca ggggctggct ctgtcagcaa tcccggtgat
     9421 ttttacctca tttggttttc acggtagcgt gccgagtatt gtcagctata tggatggcaa
     9481 cgttcgtaag ctacgcaggg tgtttataac cggtagtgcg atccccctgg tggcatatat
     9541 tttctggcag gtggcaacgc ttggcagcat tgattcaaca acctttatgg gattgctggc
     9601 taatcatgct ggattaaacg ggctgttaca ggcgttacgc gaaatggtgg cctctccgca
     9661 tgttgagctg gcagtgcatt tatttgctga tttagccctc gccacgtcat ttctcggcgt
     9721 tgcgttaggc ttatttgatt atctggctga tttatttcag cgttcaaata ccgttggtgg
     9781 acggttgcaa actggtgcaa ttacctttct gccgccgttg gcgtttgcac tgttttatcc
     9841 acgaggattt gtgatggcgc tgggttacgc cggtgtggcg ctggcggtac tggcattgat
     9901 tatcccttcg ctgttgacct ggcaaagcag aaagcacaat cctcaggcgg gttaccgggt
     9961 caaaggtggt cgtccggcgc tggtggtggt gtttctctgt ggtattgctg tgattggcgt
    10021 gcaatttttg attgcggcag ggttgttacc agaagtgagg tgatcagata gcctcaaatt
    10081 ccttattggg tgccagaatt aacgctgaca cccaatttgg cctcttaatg caggcagcac
    10141 tgcttaaatt tcttaccact accgcacggg caaggatcgt tacgccccgg tttctcttct
    10201 gctttgatcg gttgctgaac agctttttcc tgcggatgcg ccatccagta cgcatgtaga
    10261 tcaagcgccg ccagtcgaat ggcatctacg ctctcttcaa acgcttctgg cgacatcttt
    10321 tctacccgct cgaagttttc ctcagtaccg tgcagcgcaa tcgcctccag cgctggtttt
    10381 aacgaatcgg gcaacgttga ccagtcagaa agtgccacgc cccgcatata gccaaagcac
    10441 cactcctcaa caatcgtcag ctcgctgcca tcaacttctc gcaagccgaa taacggctca
    10501 aactgctccg ggaattcgtt cagacgctct gcggtatcgg ccatatgttg aaaagccagg
    10561 ttcataaagc gcgtcatctc tttctctgac gcccagcgcg gcacatagtc agccccaccc
    10621 cacacggcaa ccagccactg ttccggttca atctcttgcg gagaactcaa caccgccgtc
    10681 aataaatcgt ccagctccgc cacatcaagg atggcgtggt tagtgttgta tttggtcaga
    10741 atatcgtcca gccattccaa ctcactttcg tttaacggtc ccgttttcat acgcttttcc
    10801 ttgtggatct caactcgcca gcacctatct tacatgccgg tccgtatcag agatactttt
    10861 tgagtggctt tgccggtgat taaaaattaa ggagggtgta acgacaagtt gcaggcacaa
    10921 aaaaaccacc cgaaggtggt ttcacgacac tgcttattgc tttgatttta ttcttatctt
    10981 tcccatggta cccggagcgg gacttgaacc cgcacagcgc gaacgccgag ggattttaaa
    11041 tcccttgtgt ctaccgattc caccatccgg gctcgggaag aaagtggagg cgcgttccgg
    11101 agtcgaaccg gactagacgg atttgcaatc cgctacataa ccgctttgtt aacgcgccaa
    11161 attcttcagg cctttcagcc agacatccgc ttgacgccga tgtcttttaa actggagcgg
    11221 gaaacgagac tcgaactcgc gaccccgacc ttggcaaggt cgtgctctac caactgagct
    11281 attcccgcat tcattaagca atcagttaat cacttgattt tattatcgtc tggcaatcag
    11341 tgccgccgtt cgatgcgttg cattctactt acctggcgcg atgagtcaac gatatttttc
    11401 accacttttg atcgtttgct gaaaattacg ccgaaacgat cactgatcaa gcaaatctgc
    11461 acgcgcagcg ctcaaatatt gcaacattga ccacagagtc agcaccgcag ccacaaagaa
    11521 aagtgcaata ccggcgtact caacccaaat gttcggacgc cacagcagcc aggccaacgc
    11581 caccatctgg gcagtggttt tcactttccc aatccaggag acagccacgc tactgcgttt
    11641 acccaactcc gccatccatt cgcgtagcgc agaaataata atttcacggg cgatcatcgt
    11701 tgccgccggt agggtcaccc accagctgtg ataatgctcg gttaccagca ccatggcgat
    11761 agccacgaga actttatctg ctacagggtc aaggaaagca ccaaaccggg tactctggtt
    11821 ccagcggcgt gccagaaaac catcgaacca gtcagtcacc gccgcgacgc agaaaatgag
    11881 cgcggcggca aacggcgacc aggtgacagg cagataaaag accaatacaa agaatgggat
    11941 aaggatgaca cggaacagtg taagcaacgt agggatatta aattgcataa tgacgggtaa
    12001 ctatctgttg tcagtaagat tacccctatg ttgctacaga gacatcaatg tttcaacgac
    12061 cagaagatct tttctgccag accttgcgaa atacccggca cttttgcaat ttcctcgacg
    12121 ctggcgttac gtaaaccttg caaaccgccc atatatttca acaacatttg ccgacgtttt
    12181 ggcccgacgc cttcaatggt ttccagggaa ctggtatttt tgaccttcgc ccgtttttta
    12241 cggtgcccgc caatcgcgtg atcatgtgat tcatcgcgaa tatgctggat aacatgcagc
    12301 gcgggtgaat ctggcggcaa actaaatccc tcatcttccg gctcaaagaa cagcgtttcc
    12361 agtccagcct tacgatctgc tcctttggca acgccaagta gcagcggatg atttttatcc
    12421 catgagacat ccagttcggc gaagacattt ttcgcctgcg caagctggcc tttgccgccg
    12481 tcgataagga tcacatccgg gatcttactg tcgtcaatgg ctttaccata acgccgacgc
    12541 agcacctgat tcatcgccgc ataatcatcg cccggcgtga tgcctgtaat gttatagcgc
    12601 cgatactccg cacgcagcgg gccgttagca tcaaacacca cacaggaagc gacggtttgt
    12661 tcgcccatgg tatggctgat gtcaaagcac tccatccgct tcacttccgg caatttcaac
    12721 acgctggcaa gcgcggtcag tcgctggtga acggtagatt gctgcgaaag tttgctggtt
    12781 aaggccgtcg ccgcattggt gcgcgcgagt ttcagataac gcgccctatc gccgcgaggt
    12841 ttggtttgaa cattaatctt gcgtcccgcc agttctgaaa gggaatcggc gagcagcgtt
    12901 ttatcgctaa gattaaaatc gagcaggatc tcacccggta aggtgcgcat ctggctgcct
    12961 tgtaaataga actgacctac gaaggtttct accacctcgc tcagttccgt accgccaggc
    13021 actttcggga aatagctgcg gctgccgagc actttgccct gacgaatgaa caatacgtgg
    13081 acacaagcca tgcccgcatc gaacgccaca ccaataacgt caaggtcgtc gccggtattg
    13141 gaaacaaact gtttttcggt gacgcgtcgc accgcctgaa tttggtcgcg aatacgtgcc
    13201 gcttcttcaa actccagatt ctgactggca gtttccatac ggctaatgag ttgcgtaagc
    13261 acctgatcat ctttgccaga caaaaacagg cgcacatact cgacctgctg agcgtattct
    13321 tcttcactca ccagtccttc aacgcacggt cccagacagc gccctatctg atattgcaga
    13381 cacggacgcg agcgattgcg ataaacacta ttttcgcact ggcgaatggg gaaaatcttt
    13441 tgcagtagcg ccagagtttc acgtacggca tagccattcg ggaacgggcc gaaatattca
    13501 cctttggcat gcttcgcacc acgatgcatc gccagacgcg ggtgggtatc gccactcagg
    13561 aagataaaag gataagattt atcatcgcgt agcaaaacgt tgtaacgcgg ctgatagagt
    13621 ttgatgtagt tgtgttccag caacagcgct tcggtttctg tatgagtaac cgttacatca
    13681 atttgctgaa tctgggcgac cagcgcttcg gttttgcgcg aagcgaggtt gctacggaaa
    13741 tagctggaaa gccgtttttt caggtctttc gctttgccga catagataac cgtaccacca
    13801 gcatcgtaca tgcgataaac gcctggctgg ctggttacgg tttttaaaaa cgcttttgcg
    13861 tcaaactgat cactcactga cttgataatg tctccgcatt acacagacca tggcgaattg
    13921 ccaggtgagt cagctcaaca tcgccatgaa tgtttagttt actgaacata cgatagcggt
    13981 agctgttcac cgttttcgga ctgagattga gctgttctga gatctcattg accttctggc
    14041 ccttggtgat catcagcata atctgcaatt cacgttcaga caaactggca aatgggcttt
    14101 ctgttttttc tggttcgatc tggcttaacg ccatttgttg agcgatgtca gaagcaatgt
    14161 aacgctgccc tgaatagaca gaacgaatcg cactcacgac ttcctgcgga gccgcgcctt
    14221 tgctgaggta gcccgcagca ccggcctgca tgactttcgc tggtaaaggg ttttctgtat
    14281 gaacggtaag catgatgatt ttgacatcag ctgtggaacg cgcgatttta cgcgtcgcct
    14341 caagaccgcc aatgcccggc atactcatgt ccattagcac cacgtcaacg gcatttgtcc
    14401 ggcaccactt aacggcgtct tcaccgcacg atgcctcacc gacgactttt atacccttta
    14461 tatcttccag aatgcgtcgt atccctgcgc gcaccagttc gtggtcatca acaagtagaa
    14521 cgttgatcaa agaaatatct ccagaaatag ggataacgct actgatagtt agtcattcgt
    14581 atattagcgg tttttattgc aactttgaaa cgttaaaaat ggtgggtatt cgatttttct
    14641 ctcgtttttg tcaattcgat tgtccacagt tatggtcacg cccgtcacca acggcttacc
    14701 ggatcgtttc acagtaagcc ctacgatgaa atgtgacaaa aattgacttt attcagcaaa
    14761 aatgaaaatc agcccgctga atatgtaaca ttaattaacc cgaacaatac gggcaaaaac
    14821 attcatgata aaaatattta ttggtcatta tattaacgta ttttatagca ctgccgatat
    14881 cacgctcaaa aaacaaccac tgctattttt agcaaagctt atggtatact ccgccgcctt
    14941 aacatttttc accgcaaatt ttcattgcaa catgacgagg aaaataaatg agtacgcctg
    15001 atttttctac tgccgagaat aatcaagaac tggcaaatga agtctcctgc ctgaaagcga
    15061 tgctgacgct gatgctgcag gcgatgggac aagctgacgc gggccgcgtg atgttaaaga
    15121 tggaaaaaca gcttgcgctg atcgaagacg aaacccaggc tgcagtattt tccaaaacgg
    15181 ttaagcaaat taaacaagcc taccgtcagt aatataaaac cggctgagag cgtgcctttc
    15241 agccggtttt tgcatctggc acgcagaaag aaaagcgatc aaattaagcc agtagcggcc
    15301 gcgtaacagg ccacctgggt cttatttggt gcattgattt ttttctgcat gtttttctga
    15361 tggaaattga ccgtattctc agagattgac aaaatcatcg ctatctctgc tgatgtcttc
    15421 ccttccgccg tccatttcag aatttctttt tcgcgcttgc tgaaattcat ctctggcgtc
    15481 atcactattt catcatttaa acgcatcaga gccatcagac tttcgcgcac cagtaactgc
    15541 atttttaatt gcagttcatc actaagaatg ggtatttcgc gcgtgctgca acgggaaaag
    15601 gacaaaaagc ccagcgcccg atttggcagc attaaatact gagtgacacc gcggcgtaaa
    15661 ccatgtgcgt gcgcggcttc ccataatggc tgtgcttcgc tgaataagtc atcattccac
    15721 attaaatggc cctgactaaa gttttcaggg ttcagcacag gatcaattgc gagaaaatta
    15781 gcacaggatc aattgcgaga aaattttttg cctgataata actaacccac gactcagggt
    15841 aattggtgta gaaagccact ttaggtcgcg tgaatggtac cgggtggcga acacataacg
    15901 aatagtaatc gtactccagc tgctgagcct gaagctctat ttcatggtag acctcttctg
    15961 cgacctccat cctctgaaaa cgcaacagca tcgtgcgacg ccaactgaaa aaatccgtat
    16021 cctgcatagt aaaccgcaac gcccctgaga gtgagtatca tttataatga taattcaaac
    16081 tatcacataa ataagattta tatataattt atattattca ggcaatgaat tacttttgca
    16141 agccatcgca ttctcttatg ttattaatga gttatgctga tttgttaagc agttttatca
    16201 cgcttgaaat ggcgtcccgc cccgacaggt gaatcgtcgg ggctgatttt ttcttattat
    16261 tgcagcagaa acttctcgag gaactgtcgg gtgcgaggct gctggggatc ggcaaataac
    16321 gcttttgctg ccccctgctc gactatccgc cccaggtcca taaaaatcgc ccggtccgca
    16381 acatcccggg caaagctcat ttcgtgcgtc acaatcacca tcgtgcgctt ttcctgcgcc
    16441 agctggcgga ttgtgttcag gacttcgccc accagctctg gatccagcgc tgacgttggc
    16501 tcgtcaaaca aaatcacctc aggacgcatt gccagcgcac gcgcaatcgc tacacgctgc
    16561 tgttgaccgc cagacaaacg acgtggatag ctggtttctt taccggccag cccaactttc
    16621 gccagcagct cgcgagcgcg cgccgtggcc tcttctttcg gttcgccttt gacgatcacc
    16681 ggcccttcaa taatgttttc cagcaccgta cgatgcggaa acaaattaaa gttctggaag
    16741 acaaacccga cgtgctgacg caactggcga atcagcgatt tttgctgact taatgaacgt
    16801 gcagtatcaa tagtgatatc gccaacggtg atcgttcccg cttccggttg ttccagcaga
    16861 tttatgctgc gtagcaacgt ggttttgccg gaaccactcg gaccgataat tgccaccact
    16921 tcgccaggct ttacctcgag gtcgataccg tgcagcaccg tctgaccttg gaattttttc
    16981 accaggttct taacttcaat ggcactcatt tgggttctct ctcctggcga ttaagttgat
    17041 tctcaaaatg gttctgcaac gtcgataaca cagtcgccat gatccagtag atgagcgaag
    17101 ccgccaggta catggtgaac acctccagcg tgcgcgaggt aatcaactgc gcctgacgga
    17161 acagctccgg cacctggatt gtcgcggcca gcgacgtatc ttttaccaga ctgataaagc
    17221 tgttcgacag cggcggcaac gccacccgcg ccgcctgtgg caaaatcgcg cgacgcatgg
    17281 tctgccacgg cgtcatacca atactggcag cggcttccca ctgaccttta tcaatagaag
    17341 aaatggcggc gcgcagcgtt tcggcggcat aggcggcagt gttcagcgac agaccaatca
    17401 ttgctgacag aatgggatct aattcgatac caaactgcgg caggccgtaa tagatcataa
    17461 acagttgtgc gatgagcggc gtaccacgaa aaatagagat ataaaaacgc gccagccagc
    17521 gcacgggcca gattggcgac aggcgcatca gcgcgagaat aaacccgagt agtaagccaa
    17581 aaaacatgcc gccgatactg agttgcaggg tatacccagc ccctttcaac aggaacggca
    17641 aggaatcaat aaccagttgt atactttctt gcatgagcgt tcccggagct aaacgtgggg
    17701 atgataggcg aacagcgcag gcgcgccgcc ggtatgaata aacagaatcg gcccttcatc
    17761 tttgaagcgt ttctgactga taccgtcaat cagccccgcc atcgcttttc cggtatacac
    17821 aggatcaagc agaatgcctt ccagacgcgc cagcaatttc actgcttcca tgccttcgtc
    17881 gttcggcacg ccgtagccag gtgcaaaata gtcatcccag agtaaaattt ccgctgatgc
    17941 ggtcagctcc agttctttcg caatcgcctg ttgtaggtta accactttcg gcaattgatc
    18001 ggcaacggaa cgcgacacgg tcacgccaat cagttcgctt tcaggcatca ggtgttccag
    18061 cccaacagcc aatccggcgt gagttccggc actgcccgat gcgaccacca ccgacgaaat
    18121 attaaccgcc ccttcacact gttgcgcgat ttccagcgca ctctccacat aacccagcgc
    18181 gcccagagca ttagaaccgc caaccggaat gacatacggg cgaaagcctt gtgcttcgac
    18241 tcgcgtcgcc agctcttcca gttgggcatt gggatcggtc agtgtgtcgc acatttcaat
    18301 ctgggtattg aacagattca gcaacaaacg attgccgttg gttaaatagt tttctgcggt
    18361 tgtgccaata ggattttcca gcagcgccac gcagtgcagg ccgagtttcg ccgcaactgc
    18421 ggcagtctgc cgcacatggt tagactggat cgcgccggca gtaatcagcg tatcggcacc
    18481 ttcgcgcagg gcatctgccg cgagaaattc cagcttacgt aatttattgc cgcccattgc
    18541 catgggtgtg acgtcatccc gtttgatgaa aatttcccgt ccaagataat cagaaaagcg
    18601 cggcagatat tcgagcggcg ttggcgcgcc gataaactcc agccgtggaa aacgggttaa
    18661 attatgcagt ggcataatag cctccgatgt gtgttgttgt gattttctta ttatgcacgc
    18721 tgaaaacgcg taaataaaaa aggcgctagt gaaagcgccc ttttttgtca ttatgctgat
    18781 tatttggtca catcagcacc aaaccatttt tcggaaaggg cttgcagagt gccatctttt
    18841 tgcatttccg caattgcatc gttcactgct ttcagcaggt cttcatttcc tttacgcagc
    18901 gccacgccag actcctgacg ggagaatgct tcaccggtta ctgccagcgt atcgttggtt
    18961 ttcttcacca gatccagcgc cgccagacgg tcaacgagga tcgcatcgat acggcctacg
    19021 cgcagatcct gatatttggt cgggtcatca tcataggtac gcacatcgac gccctgaaca
    19081 ttctgccgca gccactcttc atagttggtg cccagaccga cacccacttt tttgcctttc
    19141 agatcagcag ccgttttaat ggtgccttcg ttaccttttt tcaccagcgc ctgaatacca
    19201 gaaatggtgt acggggtaga gaaatcgtat tttttcttgc gctcatcaga aatggtgacc
    19261 tgattaatca ccacatcaat acgtttagag tccagcgacg ctagcatacc gtcccatttg
    19321 gtcggtttta gtgacgcctc aacgccaaga tgttttgcca gctgttgggc aaattccact
    19381 tcaaaaccgg ttaatttgcc gtcatccccc tgaaaactga acggcggata agttccttcc
    19441 agccctacca gtagcgtacc gcgctctttg actttattaa gcagaccttc atctgcaaaa
    19501 cttttaacgc tcatgcccgc aaccagcgcc acggccatca cacccatcaa tgcctgacgt
    19561 cccagatgtg ctaatttcat attcaccccg aatgttgtta tgtctgtttg cagtgtagag
    19621 ccattgtttg taaacacaaa aacaactccg ctacatctta ttcttattta atatatatca
    19681 gaagcaggca ggctggagga tttctgcaca agtccggtac acgtttgacg ctgatagtgt
    19741 tgatacttcc gtaatgcgat gcggtaattg ttggtgctgg tggtgggcag ccacggggcg
    19801 aggatttcat caaggaaacc gtcctgcagc tgatcgaggg aaatattttg ctcatgtaga
    19861 tgattcccca aacggcgcaa acgaacgaca tattcacgca ccgtacctgg gctcatttca
    19921 gtttgctcaa aaagaaattg cttaaagccg ataatatcga aaaaatcact ctgcgttttg
    19981 caatgtaaat caccgcaaaa tcggcacaat gccgcccatg actgttgttc cacttgccag
    20041 ccattttcat caagcagcgt gtccaggcgg gaaatctcga ttttattcac tattttgccg
    20101 tcgcgaacta aggtaatgcg atcgagtaat ttacggcaat gcgcgcaatg ggcctggctg
    20161 tgtttaaagt ctttaagata gcggcttaat ggccgtcttt tcaggtgctg caccatcatt
    20221 aagaactcct ggtagtcaaa gttaaagtgc ggcatttact gacgttataa cttacccagt
    20281 ttagtgctta accgtttaat ggcctggctg tgtaactgac tgacccgcga ttccccgacc
    20341 tccagcaccg cgccaatctc tttgagattc agctcttcct ggtaatagag ggttaatacc
    20401 agtttttcgc gctccggcaa cgtttcgata gcttccatca cccgctggcg cagattactg
    20461 tccagcagtt gttgtagcgg gttttctcgc tgatgatcat cagtaaccag ttcgatgcta
    20521 tcgccgtgct cttcgcgcca ctcatcgtag gagaaaagct ggctgttatt ggtgtcgagc
    20581 aacatttggc gataatcggc aatatcgatc cctaaacgtt ccgctacctc agtttccgtg
    20641 gcgttgcggc caagttcctg ctccagttgc cctattgcct gtgccacttc acgcgcgttg
    20701 cgtcgcacgc tgcgcggcac ccagtcacgg ctgcgaagtt catccagcat agcgccacgg
    20761 atacgctgca ctgcgtaagt tgtaaatgcc gttccttgta gggcgtcata gcgttcgacg
    20821 gcattaagta acccaatgcc gcccgcctgt agcagatcgt caagttccac gctcgcgggc
    20881 agtcgaacct gcaggcgcaa tgcttcgtga cgcaccagcg ggacataacg ctgccacagc
    20941 gagtgtttat ccattacacc ttcagcggta tagagtgaat tcacgataaa cagccctgcg
    21001 ttatatgagt tatcggcatg attatccgtt tctgcagggt ttttaatcgg acgattagtg
    21061 ggtgaaatga ggggttattt gggggttacc ggtaaattcc atgcagaaaa aaccccgccg
    21121 gtggcgggga agcacgttgc tgacaaattg cgctttatgt tgccggatgc ggcgtaaacg
    21181 ccttatccgg cctacaaaaa tgtgcaaatt caataaattg caattcacct tgtaggcctg
    21241 ataagtgcag cgcatcaggc aatttggcgt tgccgtcagt ctcagttaat caggttacga
    21301 cgattaaccc tgcagcagag acagaacctg ctgcggtacc tggttggctt ttgccagcac
    21361 ggagttaccg gcctgctgga tgatctgcgc tttcgacatg ttggacactt cggtcgcata
    21421 gtcggcgtcc tgaatacggg actgcgcttc agacaggttg gtagtggtgt tgttcaggtt
    21481 ggtgactgca gaatccagac ggttctgaat agcacccagg gatgaacgga atttgtcgat
    21541 ggagctgata gcttcatcca gggcagccag aggatctttg gttgcagtgc ctgcactggt
    21601 ggtttcagtg gtcagtttgc ctgtagagtt aacataagcc tgtgccccaa cagtagctgc
    21661 aaatttacca gttgcacctg cgccatttga agctacagtt actgtaccgg tatccttatc
    21721 gacgttgtag ttgatagtgt aagatgcggt tgtggtgagc tctttgtctg catcagtata
    21781 ggtgtcattc gaattaccag caccattagt attcgcacca ccgaaggacg ccgttgcaga
    21841 ctgaatacct gtattatact taattgtcgc accagtaact gctgtgttag ccgttgcagc
    21901 actctgcact gtgctcagta cagtatcagc gcttacagtt ttggtgtagg ttacgccaga
    21961 agttgccgct gcaccaaagt tataagttgt gccagacaac tggatagaac cagttgtcgc
    22021 taaggtacta ccgctagcaa acagatcgga caatttcgct gaagatgcaa tgccggcgtt
    22081 gtttgtagat aggttaccag tggcgtccag gtacgcggct ttaccaccga tggtcacatc
    22141 gccattagca tctacatcaa acttcacatc accagtacta cgagtataaa cacctgatgc
    22201 agtagtgcca gccgctggtt tcagagtatt cgcaaagtta acaacatcgc catctgcaac
    22261 tgttgcttga gtggtgaagt tccctttagc cgcatcataa gtatagatcg cagcactcga
    22321 gccagtagta gtaactgtat ctccggtttt caggcgagac agtgcatcgc tagcgctgag
    22381 tgctgtattg tttgtggtca cagcataagg acctgttccc gttgcaccag cagcggtcag
    22441 atcgctgact gtagcagctt tgttcgcaat agtgcctttg ccattcacgt taaaaccatt
    22501 cagccccagc gtatctgagt caattttctt cagatcaatc gtgatagtct ggccgtcatt
    22561 cgcaccaacc tgaattttca ttgaaccgtc tttcgccagt acgttcacgc cgttgaactg
    22621 ggtctggcca gatacgcggt caatttcgtc cagacgggat ttgatttcgt cctgaatgga
    22681 gtccagatcc gaatcggagt tagtcccggt agaagcctga accgtcagtt caagaatacg
    22741 ctgtaagttg ttgttgattt cggacagcgc gccttcagtg gtctgcgcaa cggagatacc
    22801 gtcgttggcg ttacgggccg cctgagtcag gcctttaata ttagaagtaa aacggttagc
    22861 aatcgcctga cctgcggcgt catccttcgc gctgttaata cgcaagccag aagacagacg
    22921 ctcgatagaa ctcgacagcg cagactggtt cttgttgata ttattttgag tgatcagcga
    22981 gaggctgttg gtattaatga cttgtgccat gattcgttat cctatattgc aagtcgttga
    23041 ttacgtattg ggtttccacc cgtcggctca atcgccgtca accctgttat cgtctgtcgt
    23101 aaaacaacct ttagaatttt tttcacaaac agccattttt tgttagtcgc cgaaatactc
    23161 ttttctctgc cccttattcc cgctattaaa aaaaacaatt aaacgtaaac tttgcgcaat
    23221 tcaggccaat aaccccggta ttcgttttac gtgtcgaaag ataaaaggaa atcgcatggc
    23281 aagtatttca tcgctgggag tcgggtcagg tctggattta agttcaatcc ttgatagcct
    23341 caccgccgcg caaaaagcga cgctaacccc tatttcaaat cagcaatcgt cgtttaccgc
    23401 taaacttagc gcctacggta cgctgaaaag cgcgctgacg actttccaga ccgccaatac
    23461 tgcattgtct aaagccgatc ttttttccgc caccagcact accagcagca ccaccgcgtt
    23521 cagtgccacc actgcgggta acgccatcgc cgggaaatac accatcagcg tcacccatct
    23581 ggcgcaggcg caaaccctga ccacgcgcac caccagagat gatacgaaaa cggcgatcgc
    23641 caccagcgac agcaaactca ccattcaaca aggcggcgac aaagatccga ttaccattga
    23701 tatcagcgcg gctaactcat cgttaagcgg gatccgtgat gctatcaaca acgcaaaagc
    23761 gggcgtaagt gcgagcatca ttaacgtggg taacggtgaa tatcgtctgt cagtcacatc
    23821 aaatgacacc ggccttgata atgcgatgac actctcggtc agcggtgatg atgcgctaca
    23881 aagttttatg ggctatgacg ccagtgccag cagcaacggt atggaggtct cggtcgccgc
    23941 caagaatgcg cagctgacgg tcaacaacgt cgccattgag aacagcagca acaccatcag
    24001 cgacgcgctg gaaaacatca ccctgaacct gaacgatgtc accacgggca accagacgct
    24061 aaccatcact caggacacct ccaaagcgca aacggcgatt aaagactggg tgaatgccta
    24121 taactcgtta atagatacct tcagtagcct gaccaaatac accgccgtag atgcgggagc
    24181 tgatagccag agttctagca atggcgcact gctcggcgac tccacgctgc ggacgattca
    24241 gacgcagttg aagtcgatgc tgagtaatac cgtcagttct tccagctata aaacgctggc
    24301 gcagattggt atcacgaccg atcccagcga tggcaaactg gaactggatg ccgacaaact
    24361 caccgctgca ctgaaaaaag atgccagcgg cgtaggtgca ttgattgttg gcgatggtaa
    24421 aaaaaccggc atcacgacca ccatcggcag caacctgacc agttggcttt cgacaacggg
    24481 cattattaaa gccgctaccg atggcgttag taagaccctg aataagttaa ctaaagacta
    24541 caacgccgcc agcgatcgca ttgatgcgca ggtcgcgcgc tacaaaaaac aatttaccca
    24601 actggacgtt ttaatgacct cgttaaacag caccagcagc tacttaacgc agcagttcga
    24661 aaacaacagt aattccaagt aatcattatt catcgggaga caggtcatgt acgcggcaaa
    24721 aggcacccag gcctatgcac aaattggcgt cgaaagcgcc gtaatgagcg ccagccagca
    24781 gcagctggtc accatgctat ttgatggagt gctgagcgca ctggttagag cgcgcctgtt
    24841 tatgcaggac aacaatcagc aaggcaaagg cgtctctttg tcaaaagcga tcaacatcat
    24901 tgagaacgga ctgcgggtga gtcttgatga agagagcaaa gacgaactaa cccaaaactt
    24961 gattgctctt tatagctata tggtcaggcg cttgctgcaa gccaatttac gcaacgatgt
    25021 ctccgcagtc gaagaagtgg aagcattaat gcgcaatatt gccgatgcct ggaaagagtc
    25081 gttactctcc ccttctttga ttcaggaccc agtctgatga accatgcacc gcatttgtat
    25141 ttcgcctggc aacaactcgt cgaaaaaagc cagctcatgt tacgcctggc aacggaagaa
    25201 caatgggacg aactcatcgc cagcgaaatg gcgtatgtga atgcggtgca ggagtatagc
    25261 acacctgact gaagaggttg ccccgtccac cacgatgcag gagcagctcc gcccgatgct
    25321 gcgcctgatt ctcgacaacg aaagcaaggt aaagcagtta ttacagattc gtatggatga
    25381 actggcgaaa ctggtcggtc agtcatcggt gcaaaaatcg gtgttaagtg cctatggcga
    25441 tcagggcggc tttgtgctgg ctccgcaaga taacttctcg tgaatcttaa cgagctaatg
    25501 gttcgcgaat aatccgatta cggctacgct tctaatgttc cccttgaatg gagtcgaaga
    25561 atgcgtaatc ccacgctgtt acaatgtttt cactggtatt acccggaagg cggtaagctc
    25621 tggcctgaac tggccgagcg cgccgacggt tttaatgata ttggtatcaa tatggtctgg
    25681 ttgccgcccg cctataaagg cgcatcgggc gggtattcgg tcggctacga ctcctataat
    25741 ttatttgatt taggcgagtt tgatcagaaa ggcagcatcc ctactaaata tggcgataaa
    25801 gtacaattgc tggccgccat tgacgccctg aaacgtaatg acattgcggt gctgttggac
    25861 gtggtagtca accacaaaat gggcgcggat gaaaaagaag ctattcgcgt gcagcgtgta
    25921 aatgctgacg accgtacgca aattgatgaa gaaatcattg agtgcgaagg ctggacgcgt
    25981 tacaccttcc ccgcccgtgc cgggcaatac tcacagttta tctgggattt caaatgtttt
    26041 agcggtatcg accatatcga aaaccctgat gaagatggca tatttaaaat tgttaacgac
    26101 tacaccggcg aaggctggaa cgatcaggtt gatgatgaat taggtaattt cgattatctg
    26161 atgggcgaga atatcgattt tcgcaatcat gccgtgacgg aagagattaa atactgggcg
    26221 cgctgggtga tggaacaaac gcaatgcgac ggttttcgtc ttgatgcggt caaacatatt
    26281 ccggcgtggt tttataaaga gtggatcgaa cacgtacagg aagttgcgcc aaagccgctg
    26341 tttattgtgg cggagtactg gtcgcatgaa gtcgataaac tgcaaacgta tattgatcag
    26401 gtggaaggca aaaccatgct gttcgatgcg ccgctgcaga tgaaattcca tgaagcatcg
    26461 cgcatggggc gcgactacga catgacgcag attttcacgg gtacattagt ggaagccgat
    26521 cctttccacg ccgtgacgct cgttgccaat cacgacaccc aaccgttgca agccctcgaa
    26581 gcgccggtcg aaccgtggtt taaaccgctg gcgtatgcct taattttgtt gcgggaaaat
    26641 ggcgttcctt cggtattcta tccggacctc tacggtgcgc attacgaaga tgtcggtggt
    26701 gacgggcaaa cctatccgat agatatgcca ataatcgaac agcttgatga gttaattctc
    26761 gcccgtcagc gtttcgccca cggtgtacag acgttatttt tcgaccatcc gaactgcatt
    26821 gcctttagcc gcagtggcac cgacgaatat cccggctgcg tggtggtcat gtcgaacggg
    26881 gatgatggcg aaaaaaccat tcatctggga gagaattacg gcaataaaac ctggcgtgat
    26941 tttctgggga accggcaaga gagcgtaata accgacgaac acggcgaagc aaccttcttt
    27001 tgcaacggcg gcagcgtcag cgtgtgggtt atcgaagagg tgatttaaat tcatccccgg
    27061 cggcaagccg gggagatttc attacggcag tggcgtcggt aacggcgctt tatccagcgc
    27121 ggcggcacac tctgccgtcg ggcgatccac acgctccatc gtcataccat cgtactcaat
    27181 ggtgttaccg tcacgctcaa cctcgtacag ctcacgtttt acggtaacgt tagtgagatc
    27241 atcagacatc aatgccaact tacccggcac agcaatcacc cgctgccact gacggcaatc
    27301 cagagtatca ccctctttag tgacaatcag gctgcctatc gcttccggac tgaccagcgc
    27361 acgttgcggc cctttggtct gccagtagcc cgccagccag tccggcgcgg gggttttcac
    27421 gacattgtta tagttttcga cttcggcaca gcccgccagc aacatgagcg cgcctgcaat
    27481 tgcgagtttt ttcatcattc gtcctgcatg agaagaaaag aggattgtgg cattaaagcc
    27541 ctgatgtcgc cagcctttcc aggttcagag agaaatttga tctaactatt atttttgtga
    27601 attattaccc cgaaaataaa tttgcatgat gtatgattcg cgactcttgt ttcaaacctt
    27661 ctgagttcag aggctacatt catgtcatgg cagcaattca aacacgcctg gttgattaaa
    27721 ttctgggcac ccatccctgc ggtcatcgcg gcgggtattc tctccactta ctattttggc
    27781 attactggca ccttttgggc tgtcacgggt gaatttaccc gttggggcgg ccagctcctg
    27841 cagctgtttg gcgtccatgc tgaagagtgg ggttatttta aaattatcca tctggaagga
    27901 tcgccattaa cccgcatcga cgggatgatg atcctcggca tgtttggcgg ctgctttgcc
    27961 gcagcgctgt gggccaacaa tgtcaaactg cgcatgccac gcagccgtat ccgcattatg
    28021 caggccatta ttggcggtat tatcgctggt tttggcgcgc gtctggcaat gggctgtaac
    28081 ctggcggcgt tctttaccgg tattcctcag ttctcgctgc atgcctggtt ctttgccatc
    28141 gccactgcca ttggttcatg gtttggcgca cgctttaccc tgctgcccat cttccgtatt
    28201 cccgtgaaaa tgcagaaagt ttctgccgcc tcaccgctga cgcaaaaacc ggatcaggcg
    28261 cggcgtcgtt ttcgtctcgg gatgctggtc tttttcggta tgctgggctg ggcgctgctc
    28321 acggcgatga accaaccaaa actggggctg gcaatgctgt ttggcgtcgg ctttggttta
    28381 ctgattgaac gtgcgcaaat ctgctttact tcggcgttcc gcgatatgtg gatcaccgga
    28441 cgtacccata tggcgaaagc aatcattatc ggtatggcgg tgagtgccat cgggatcttc
    28501 agttacgtac agttaggcgt tgaacccaaa atcatgtggg cgggaccaaa cgcggtaatt
    28561 ggtggtttac tgtttggttt tggcatcgtg ctggcaggcg gctgcgaaac cggctggatg
    28621 taccgcgcgg tagaaggcca ggtgcactac tggtgggtcg gtctgggcaa tgtgatcggc
    28681 tcgacgattc tggcgtatta ctgggatgat ttcgctccgg cgctggccac cgactgggac
    28741 aaaatcaacc tgctgaaaac ctttggcccg atgggtggcc tgctggtgac atatttgctg
    28801 ttgtttactg cgctgatgtt gattatcggc tgggaaaaac gcttcttccg ccgtgcggca
    28861 ccgcagactg ctaaggagat cgcatgaaaa atatcgttcc tgattaccgc cttgatatgg
    28921 tgggtgaacc ctgcccttat ccggcagtcg caacccttga ggcgatgccg cagttaaaaa
    28981 aaggggaaat cctggaagtg gtgagcgact gtccacagtc gatcaataat attccactgg
    29041 atgcgcgtaa tcacggctat acggtgcggg atattcagca agacgggccg accattcgtt
    29101 atttaattca gaagtaatcc ctcattcccg ctgtggccca cagcgggaac atcgttgcct
    29161 ctgacacata gattttaccc gccccctctc ctattctttt cagtatgatc tcaggaggtt
    29221 tctatgtgtg gacgctttgc ccaatcccaa acgcgtgaag attaccttgc gcttctcgcg
    29281 gaagatattg aacgcgatat tccctacgat cccgaaccca ttggcagata caacgtcgcg
    29341 ccgggaacca aagttcttct gctcagtgaa cgtgatgaac accttcatct ggatccggtt
    29401 ttctggggat atgctcccgg atggtgggat aaaccgccgc tgattaacgc ccgcgtagaa
    29461 actgccgcaa ccagtcgcat gtttaaaccg ctctggcaac atggtcgggc aatctgtttt
    29521 gccgatggct ggtttgagtg gaaaaaagaa ggcgacaaaa aacagccttt ttttatctat
    29581 cgtgctgatg gacaacctat ttttatggcc gcgataggta gcacaccatt tgagcatggt
    29641 gacgaagccg aaggattttt aattgtcact gctgcagcag accagggtct ggtagacatt
    29701 catgaccgcc gcccgctggt tctgtcgcca gaagctgcac aggaatggat gcggcaagag
    29761 attggcggta aagaagcatc agaaattgct accaacggct gtgtgccagc aaaccagttc
    29821 acctggcacc cggtatcgcg cgcggtaggt aatgtcaaaa accagggcgc ggagttaatt
    29881 caacctgttt gttgacatcc tccacgccct gaaggacgag gctccctgct acgttcaggc
    29941 tgtcgcctga atcatttcgg tgggttcctg cttcaacggg cggcctgact gcaccatctc
    30001 tccacaggca agaacggcgt gccccgccgc taaaatgtta cgagcgccat ttacatcggc
    30061 gttcgctgta tatccacata cctggcatct gaatttactt tgtgacaggc ggttttcttt
    30121 cgctgtatga ccacagcacg cgcaacgctg gcttgtgcac gctggcggaa cagcaaacac
    30181 ctgaccgcca cgccagagct gcttgtactc aagctggcgg cgcatttcat accagccctg
    30241 atccagtatc gaacggttta aacctgattt tgcccggaca ttgcgccccg gc
//
LOCUS       DADMJE010000034        29252 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.035, whole genome shotgun sequence.
ACCESSION   DADMJE010000034 DADMJE010000000
VERSION     DADMJE010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29252)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29252)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29252
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.035"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..154
                     /locus_tag="JN001_001374"
     CDS             <1..154
                     /locus_tag="JN001_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2135 domain-containing protein"
                     /protein_id="HAY9052656.1"
                     /translation="NYYGGRSETELTTAQLTLITDEGSVNEKQETFIVPMRNAGELTL
                     VKSFDW"
     gene            429..3278
                     /gene="rcsC"
                     /locus_tag="JN001_001375"
     CDS             429..3278
                     /gene="rcsC"
                     /locus_tag="JN001_001375"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416722.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     RcsC"
                     /protein_id="HAY9052657.1"
                     /translation="MKYLASFRTTLKASRYMFRALALVLWLLIAFSSVFYIVNALHQR
                     ESEIRQEFNLSSDQAQRFIQRTSDVMKELKYIAENRLSAENGVLSPRGRETQADVPAF
                     EPLFADSDCSAMSNTWRGSLESLAWFMRYWRDNFSAAYDLNRVFLIGSDNLCMANFGL
                     RDMPVERDTALKALHERINKYRNAPQDDSGSNLYWISEGPRPGVGYFYALTPVYLANR
                     LQALLGVEQTIRMENFFLPGTLPMGVTILDENGHTLISLTGPESKIKGEPRWMQERSW
                     FGYTEGFRELVLKKNLPPSSLSIVYSVPVDKVLERIRMLILNAILLNVLAGAALFTLA
                     RMYERRIFIPAESDALRLEEHEQFNRKIVASAPVGICILRTADGVNILSNELAHTYLN
                     MLTHEDRQRLTQIICGQQVNFVDVLTSNNTNLQISFVHSRYRNENVAICVLVDVSSRV
                     KMEESLQEMAQAAEQASQSKSMFLATVSHELRTPLYGIIGNLDLLQTKELPKGVDRLV
                     TAMNNSSSLLLKIISDILDFSKIESEQLKIEPREFSPREVMNHITANYLPLVVRKQLG
                     LYCFIEPDVPVALNGDPMRLQQVISNLLSNAIKFTDTGCIVLHVRADGDYLSIRVRDT
                     GVGIPAKEVVRLFDPFFQVGTGVQRNFQGTGLGLAICEKLISMMDGDISVDSEPGMGS
                     QFTVRIPLYGAQYPQKKGVEGLSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQE
                     PTPEDVLITDEVVSKKWQGRAVVTFCRRHIGIPLEKAPGEWVHSVAAPHELPALLARI
                     YLIEMESDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAND
                     GVDALNVLSKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRC
                     LESGMDSCLSKPVTLDVIKQTLTVYAERVRKSRES"
     gene            complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JN001_001376"
     CDS             complement(3478..4128)
                     /gene="rcsB"
                     /locus_tag="JN001_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsB"
                     /protein_id="HAY9052658.1"
                     /translation="MNNMNVIIADDHPIVLFGIRKSLEQIEWVNVVGEFEDSTALINN
                     LPKLDAHVLITDLSMPGDKYGDGITLIKYIKRHFPSLSIIVLTMNNNPAILSAVLDLD
                     IEGIVLKQGAPTDLPKALAALQKGKKFTPESVSRLLEKISAGGYGDKRLSPKESEVLR
                     LFAEGFLVTEIAKKLNRSIKTISSQKKSAMMKLGVENDIALLNYLSSVTLSPADKD"
     gene            complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JN001_001377"
     CDS             complement(4145..6817)
                     /gene="rcsD"
                     /locus_tag="JN001_001377"
                     /EC_number="2.7.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase RcsD"
                     /protein_id="HAY9052659.1"
                     /translation="MRQKETTATTRFSLLPGSITRFFLLLIIVLLVTMGVMVQSAVNA
                     WLKDKSYQIVDITHAIQKRVNTWRYVTWQIYDNIAATTSPSSGEGLQETRLKQDVYYL
                     EKPRRKTEALIFGSHDNSTLEMTQRMSTYLDTLWGAENVPWSMYYLNGQDNSLVLIST
                     LPLKDLTSGFKESTISDIVDSRRAEMLQQANALDERESFSNMRRLAWQNGHYFTLRTT
                     FNQPGHLATVVAFDLPINDLIPPGMPLDSFRLEPDATATGDNDNEKEGTDSVSIHFNS
                     TKIEISSALNSTDMRLVWQVPYGTLLLDTLQNILLPLLLNIGLLALALFGYTTFRHFS
                     SRSTESLPSTAVNNELRILRAINEEIVSLLPLGLLVHDQESNRTVISNKIADHLLPHL
                     NLQNITTMAEQHQGIIQATINNELYEIRMFRSQVAPRTQIFIIRDQDREVLVNKKLKQ
                     AQRLYEKNQQGRMTFMKNIGDALKEPAQSLAESAAKLNAPESKQLANQADVLVRLVDE
                     IQLANMLADDSWKSETVLFSVQDLIDEVVPSVLPAIKRKGLQLLINNHLKAHDMRRGD
                     RDALRRILLLLMQYAVTSTQLGKITLEVDQDESSEDRLTFRILDTGEGVSIHEMDNLH
                     FPFINQPQNDRYGKADPLAFWLSDQLARKLGGHLNIKTRDGLGTRYSVHIKMLAADPE
                     VEEEEERLLDDVCVMVDVTSAEIRNIVTRQLENWGATCITPDERLISQDYDIFLTDNP
                     SNLTASGLLLSDDESGVREIGPGQLCVNFNMSNAMQEAVLQLIEVQLAQEEVTESPLG
                     GDENAQLHASGYYALFVDTVPDDVKRLYTEAATSDFAALAQTAHRLKGVFAMLNLVPG
                     KQLCETLEHLIREKDVPGIEKYISDIDSYVKSLL"
     gene            7556..8686
                     /gene="ompC"
                     /locus_tag="JN001_001378"
     CDS             7556..8686
                     /gene="ompC"
                     /locus_tag="JN001_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpC"
                     /protein_id="HAY9052660.1"
                     /translation="MKVKVLSLLVPALLVAGAANAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNKSEDGDQTYVRLGFKGETQVTDQLTGYGQWEYQIQGNTSEDNKENSWTRVAFAGL
                     KFQDVGSFDYGRNYGVVYDVTSWTDVLPEFGGDTYGSDNFMQQRGNGFATYRNTDFFG
                     LVDGLNFAVQYQGKNGSVSGEGMTNNGRGALRQNGDGVGGSITYDYEGFGIGAAVSSS
                     KRTDDQNGSYISNGVVRNYIGTGDRAETYTGGLKYDANNIYLAAQYTQTYNATRVGSL
                     GWANKAQNFEAVAQYQFDFGLRPSVAYLQSKGKNLGVINSRNYDDEDILKYVDVGATY
                     YFNKNMSTYVDYKINLLDDNQFTRDAGINTDNIVALGLVYQF"
     gene            8798..9853
                     /gene="apbE"
                     /locus_tag="JN001_001379"
     CDS             8798..9853
                     /gene="apbE"
                     /locus_tag="JN001_001379"
                     /EC_number="2.7.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase ApbE"
                     /protein_id="HAY9052661.1"
                     /translation="MEISFTRVALLAAALFFVGCDQKPQPAKTHATEVTVLEGKTMGT
                     FWRASIPGIDAKRSAELKEKIQTQLDADDQLLSTYKKDSALMRFNDSQSLSPWPVSEA
                     MAEIVTTSLRIGAKTDGAMDITVGPLVNLWGFGPEQQPVQIPSQEQIDEMKAKTGLQH
                     LTVINQSHQQYLQKDLPDLYVDLSTVGEGYAADHLARLMEQEGISRYLVSVGGALNSR
                     GINGEGLPWRVAIQKPTDKENAVQAVVDINGHGISTSGSYRNYYELDGKRLSHVIDPQ
                     TGRPIEHNLVSVTVIAPTALEADAWDTGLMVLGPEKAKEVVRREGLAVYMITKEGDSF
                     KTWMSPQFKSFLVSEKN"
     gene            9927..10979
                     /gene="ada"
                     /locus_tag="JN001_001380"
     CDS             9927..10979
                     /gene="ada"
                     /locus_tag="JN001_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-binding transcriptional
                     regulator/O6-methylguanine-DNA methyltransferase Ada"
                     /protein_id="HAY9052662.1"
                     /translation="MKNATCLTDDQRWQSVLARDPNADGEFVFAVRTTGIFCRPSCRA
                     RHALRENVSFYANASEALAAGFRPCKRCQPDKANAQQHRLDKITHACRLLEQETPVTL
                     EALADQVAMSPFHLHRLFKATTGMTPKAWQQAWRARRLRESLAKGESVTTSILNAGFP
                     DSSSYYRKADETLGMTAKQFRHGGENLAVRYALADCALGRCLVAESERGICAILLGDD
                     DATLISELQQMFPAADNAPADLTFQQHVREVIASLNQRDTPLTLPLDIRGTAFQQQVW
                     QALRTIPCGETVLANAIGKPKAVRAVASACAANKLAIVIPCHRVVGGDGTLSGYRWGV
                     SRKAQLLRREAENEER"
     gene            10979..11629
                     /gene="alkB"
                     /locus_tag="JN001_001381"
     CDS             10979..11629
                     /gene="alkB"
                     /locus_tag="JN001_001381"
                     /EC_number="1.14.11.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA oxidative demethylase AlkB"
                     /protein_id="HAY9052663.1"
                     /translation="MLDLFADAEPWQEPLAAGAVILRRFAFNAAEQLIRDINDVASQS
                     PFRQMVTPGGYTMSVAMTNCGHLGWTIHRQGYLYSPIDPQTNKPWPAMPQSFHDLCQR
                     AATAAGYPDFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGLPAIFQFGGLK
                     RNDPLKRLLLEHGDVVVWGGESRLFYHGIQPLKAGFYPLTTDCRYNLTFRQAGKKE"
     gene            11705..13348
                     /gene="yojI"
                     /locus_tag="JN001_001382"
     CDS             11705..13348
                     /gene="yojI"
                     /locus_tag="JN001_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="microcin J25 efflux ABC transporter YojI"
                     /protein_id="HAY9052664.1"
                     /translation="MELLVLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIEMA
                     DTSLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYRLRSEFIKRILDTHVERIEQL
                     GSASLLAGLTSDVRNITIAFVRLPELVQGIILTIGSAAYLWMLSGKMLLVTAIWMAIT
                     IWGGFVLVARVYKHMATLRETEDKLYTDFQTVLEGRKELTLNRERAEYVFNNLYIPDA
                     QEYRHHIIRADTFHLSAVNWSNIMMLGAIGLVFWMANSLGWADTNVAATYSLTLLFLR
                     TPLLSAVGALPTLLMAQVAFNKLNKFALAPFKAEFPRPQAFPNWQTLELRNVTFSYQD
                     NAFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSGEQP
                     EDYRKLFSAVFTDVWLFDQLLGPEGKPANPQLVEKWLAQLKMAHKLELSNGRIVNLKL
                     SKGQKKRVALLLALAEERDIILLDEWAADQDPHFRREFYQVLLPLMQEMGKTIFAISH
                     DDHYFIHADRLLEMRNGQLSELTGEERDAASRDAVARTA"
     gene            13566..15212
                     /gene="mqo"
                     /locus_tag="JN001_001383"
     CDS             13566..15212
                     /gene="mqo"
                     /locus_tag="JN001_001383"
                     /EC_number="1.1.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase (quinone)"
                     /protein_id="HAY9052665.1"
                     /translation="MKKVTAMLFSMAVGLNAVSMAAKAKASEEQETDVLLIGGGIMSA
                     TLGTYLRELEPEWSMTMLERLEGVAQESSNGWNNAGTGHSALMELNYTPQNADGSISI
                     EKAVAINEAFQISRQFWAHQVERGVLRTPRSFINTVPHMSFVWGEDNVNFLRARYAAL
                     QQSSLFRGMRYSEDHAQIKEWAPLVMEGRDPQQKVAATRTEIGTDVNYGEITRQLIAS
                     LQKKSNFSLQLSSEVRALKRNDDNTWTVTVADLKNGTAQNIRAKFVFIGAGGAALKLL
                     QESGIPEAKDYAGFPVGGQFLVSENPDVVNHHLAKVYGKASVGAPPMSVPHIDTRVLD
                     GKRVVLFGPFATFSTKFLKNGSLWDLMSSTTTSNVMPMMHVGLDNFDLVKYLVSQVML
                     SEEDRFEALKEYYPQAKKEDWRLWQAGQRVQIIKRDADKGGVLRLGTEVVSDQQGTIA
                     ALLGASPGASTAAPIMLDLLEKVFGDRVSSPQWQATLKAIVPSYGRKLNGDVAATERE
                     LQYTSEVLGLKYDKPQAADSTPKPQLKPQPVQKEVADIAL"
     gene            complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JN001_001384"
     CDS             complement(15362..15850)
                     /gene="eco"
                     /locus_tag="JN001_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease inhibitor ecotin"
                     /protein_id="HAY9052666.1"
                     /translation="MKTILPAVLFAAFATTSAWAAESVQPLEKIAPYPQAEKGMKRQV
                     IQLTPQEDESTLKVELLIGQTLEVDCNLHRLGGKLESKTLEGWGYDYYVFDKVSSPVS
                     TMMACPDGKKEKKFVTAYLGDAGMLRYNSKLPIVVYTPDNVDVKYRVWKAEEKIDNAE
                     VR"
     gene            complement(15985..16149)
                     /locus_tag="JN001_001385"
     CDS             complement(15985..16149)
                     /locus_tag="JN001_001385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052667.1"
                     /translation="MHTPIGVKPVAGSKEWREAWQKRAFAHISNGYKHIYIAINSPEI
                     FLLVCSLIRI"
     gene            16258..16752
                     /gene="napF"
                     /locus_tag="JN001_001386"
     CDS             16258..16752
                     /gene="napF"
                     /locus_tag="JN001_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapF"
                     /protein_id="HAY9052668.1"
                     /translation="MKIDASRRGILTGRWRKASNGIRPPWSGDESHFLTHCTRCDACI
                     NACENNILQRGAGGYPSVNFKNNECSFCYACAQACPESLFSPRHTRAWDLQFTIGDAC
                     LAYQSVECRRCQDSCEPMAIIFRPTLSGIYQPQLNSQLCNGCGACAASCPVSAITAEY
                     LHAH"
     gene            16742..17005
                     /gene="napD"
                     /locus_tag="JN001_001387"
     CDS             16742..17005
                     /gene="napD"
                     /locus_tag="JN001_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone NapD"
                     /protein_id="HAY9052669.1"
                     /translation="MHTNWQVCSLVVQAKSERISDISTQLNAFPGCEVAVSDAPSGQL
                     IVVVEAEDSETLIQTIESVRNVEGVLAVSLVYHQQEEQGEETP"
     gene            17002..19488
                     /gene="napA"
                     /locus_tag="JN001_001388"
     CDS             17002..19488
                     /gene="napA"
                     /locus_tag="JN001_001388"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="periplasmic nitrate reductase subunit alpha"
                     /protein_id="HAY9052670.1"
                     /translation="MKLSRRSFMKANAVAAAAAAAGLSVPGVARAVVGQQEAIKWDKA
                     PCRFCGTGCGVLVGTQQGRVVACQGDPDAPVNRGLNCIKGYFLPKIMYGKDRLTQPLL
                     RMKNGKYDKEGEFTLITWDQAFDVMEEKFKTALKEKGPESIGMFGSGQWTIWEGYAAS
                     KLFKAGFRSNNIDPNARHCMASAVVGFMRTFGMDEPMGCYDDIEQADAFVLWGANMAE
                     MHPILWSRITNRRLSNQNVTVAVLSTYQHRSFELADNGIIFTPQSDLVILNYIANYII
                     QNNAINQDFFSKHVNLRKGATDIGYGLRPTHPLEKAAKNPGSDASEPMSFEDYKAFVA
                     EYTLEKTAEMTGVPKDQLEQLAQLYADPNKKVISYWTMGFNQHTRGVWANNLVYNLHL
                     LTGKISQPGCGPFSLTGQPSACGTAREVGTFAHRLPADMVVTNEKHRDICEKKWNIPS
                     GTIPAKIGLHAVAQDRALKDGKLNVYWTMCTNNMQAGPNINEERMPGWRDPRNFIIVS
                     DPYPTVSALAADLILPTAMWVEKEGAYGNAERRTQFWRQQVQAPGEAKSDLWQLVQFS
                     RRFKTEEVWPEDLLAKKPELRGKTLYEVLYATPEVSKFPVSELAEDQLNDESRELGFY
                     LQKGLFEEYAWFGRGHGHDLAPFDDYHKARGLRWPVVNGKETQWRYSEGNDPYVKAGE
                     GYKFYGKPDGKAVIFALPFEPAAEAPDEEYDLWLSTGRVLEHWHTGSMTRRVPELHRA
                     FPEAVLFIHPLDAKARDLRRGDKVKVVSRRGEVISIVETRGRNRPPQGLVYMPFFDAA
                     QLVNKLTQDATDPLSKETDFKKCAVKLEKV"
     gene            19495..20190
                     /gene="napG"
                     /locus_tag="JN001_001389"
     CDS             19495..20190
                     /gene="napG"
                     /locus_tag="JN001_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-type protein NapG"
                     /protein_id="HAY9052671.1"
                     /translation="MSRSAKPQNGRRRFLRDVVRTAGGLAAVGVALGLQQQTARASGV
                     RLRPPGAINENAFASACVRCGQCVQACPYDTLKLATLASGLSAGTPYFVARDIPCEMC
                     EDIPCAKVCPSGALDREIESIDDARMGLAVLVDQENCLNFQGLRCDVCYRECPKIDEA
                     ITLELERNTRTGKHARFLPTVHRDACTGCGKCEKVCVLEQPAIKVLPLSLAKGELGHH
                     YRFGWLEGNNGKS"
     gene            20177..21040
                     /gene="napH"
                     /locus_tag="JN001_001390"
     CDS             20177..21040
                     /gene="napH"
                     /locus_tag="JN001_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinol dehydrogenase ferredoxin subunit NapH"
                     /protein_id="HAY9052672.1"
                     /translation="MANRKRDAGREALEKKGWWRSHRWLVLRRLCQFFVLGMFLSGPW
                     FGVWILHGNYSSSLLFDTVPLTDPLMTLQSLASGHLPATVALTGAVIITVLYALAGKR
                     LFCSWVCPLNPITDLANWLRRRFDLNQSATIPRHIRYVLLVVILLGSALTGTLIWEWI
                     NPVSLMGRSLVVGFGSGALLILALFLFDLLVVEHGWCGHICPVGALYGVLGSKGVITV
                     AATDRQKCNCCMDCFHVCPEPRVLRAPVLDEQSPVQVTSRDCMTCGRCVDVCSEDVFT
                     ITTRWSSGAKS"
     gene            21037..21486
                     /gene="napB"
                     /locus_tag="JN001_001391"
     CDS             21037..21486
                     /gene="napB"
                     /locus_tag="JN001_001391"
                     /EC_number="1.9.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase cytochrome c-type subunit"
                     /protein_id="HAY9052673.1"
                     /translation="MKSHDLKKALCQWTAMLALVVSGAVWAANGVDFSQSPEVSGTQE
                     GAIRMPKEQERMPLNYVNQPPMIPHSVEGYQVTTNTNRCLQCHGVESYRTTGAPRISP
                     THFMDSDGKVGAEVAPRRYFCLQCHVPQADTAPIVGNTFTPSKGYGK"
     gene            21496..22098
                     /gene="napC"
                     /locus_tag="JN001_001392"
     CDS             21496..22098
                     /gene="napC"
                     /locus_tag="JN001_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type protein NapC"
                     /protein_id="HAY9052674.1"
                     /translation="MGNSDRKPGLIKRLWKWWRTPSRLALGTLLLIGFVGGIVFWGGF
                     NTGMEKANTEEFCISCHEMRNTVYQEYMDSVHYNNRSGVRATCPDCHVPHEFVPKMIR
                     KLKASKELYGKIFGVIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFEYMDTTA
                     QKSVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMREVEPGF"
     gene            22117..22734
                     /gene="ccmA"
                     /locus_tag="JN001_001393"
     CDS             22117..22734
                     /gene="ccmA"
                     /locus_tag="JN001_001393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis heme-transporting ATPase
                     CcmA"
                     /protein_id="HAY9052675.1"
                     /translation="MLEARELLCERDERTLFSGLSFTLNAGEWVQITGSNGAGKTTLL
                     RLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDG
                     DTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVN
                     GVDRLTQRMAQHTEQGGIVILTTHQPLNVAESKIRRISLTQTRAA"
     gene            22731..23393
                     /gene="ccmB"
                     /locus_tag="JN001_001394"
     CDS             22731..23393
                     /gene="ccmB"
                     /locus_tag="JN001_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HAY9052676.1"
                     /translation="MMFWRIFRLELRVAFRHSAEIANPLWFFLIVITLFPLSIGPEPQ
                     LLARIAPGIIWVAALLSSLLALERLFRDDLQDGSLEQLMLLPLPLPAVVLAKVMAHWM
                     VTGLPLLILSPLVAMLLGMDVYGWQVMALTLLLGTPTLGFLGAPGVALTVGLKRGGVL
                     LSILVLPLTIPLLIFATAAMDAASMHLPVDGYLAILGALLAGTATLSPFATAAALRIS
                     IQ"
     gene            23435..24172
                     /gene="ccmC"
                     /locus_tag="JN001_001395"
     CDS             23435..24172
                     /gene="ccmC"
                     /locus_tag="JN001_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmC"
                     /protein_id="HAY9052677.1"
                     /translation="MWKTLHQLAIPPRLYQICGWFIPWLAIASVVVLTVGWIWGFGFA
                     PADYQQGNSYRIIYLHVPAAIWSMGIYASMAVAAFIGLVWQMKMANLAVAAMAPIGAV
                     FTFIALVTGSAWGKPMWGTWWVWDARLTSELVLLFLYVGVIALWHAFDDRRLAGRAAG
                     ILVLIGVVNLPIIHYSVEWWNTLHQGSTRMQQSIDPAMRSPLRWSIFGFLLLSATLTL
                     MRMRNLILLMEKRRPWVSELILKRGRK"
     gene            24169..24378
                     /gene="ccmD"
                     /locus_tag="JN001_001396"
     CDS             24169..24378
                     /gene="ccmD"
                     /locus_tag="JN001_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HAY9052678.1"
                     /translation="MTLAFASWNEFFAMGGYAFFVWLAVVMTVIPLVVLVVHSVMQHR
                     AILCGVEQQRAREARLRAAQQQEAA"
     gene            24375..24854
                     /gene="ccmE"
                     /locus_tag="JN001_001397"
     CDS             24375..24854
                     /gene="ccmE"
                     /locus_tag="JN001_001397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HAY9052679.1"
                     /translation="MNIRRKNRLWIACAVLAGLALTIGLVLYALRSNIDLFYTPGEIL
                     YGKRETQQMPEVGQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGILPDL
                     FREGQGVVVQGELEKGNHILAKEVLAKHDENYTPPEVEKAMEANHRRPASVYKDPAS"
     gene            24851..26794
                     /locus_tag="JN001_001398"
     CDS             24851..26794
                     /locus_tag="JN001_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HAY9052680.1"
                     /translation="MMPEIGNGLLCLALGIALLLSVYPLWGVARGDARMMASSRLFAW
                     LLFMSVAGAFLVLVNAFVVNDFTVTYVASNSNTQLPVWYRVAATWGAHEGSLLLWVLL
                     MSGWTFAVAIFSQRIPLDIVARVLAIMGMVSVGFLLFILFTSNPFSRTLPNFPIEGRD
                     LNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIASLLSGRLDSTYARFTRPWTLAAWIF
                     LTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLVGTALMHSLAVTEQRASFKAWT
                     LLLAISAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVIGGSLLLFAARG
                     HKVRSRVNNALWSRESLLLANNVLLVAAMLVVLLGTLLPLVHKQLGLGSISIGEPFFN
                     TMFTWLMVPFALLLGVGPLVRWGRDRPRKIRNLLIIAFISTLVLSLLLPWLFESKVVA
                     MTVLGLAMACWIAVLAIAEAALRISRGTKTTFSYWGMVAAHLGLAVTIVGIAFSQNYS
                     VERDVRMKSGDSVDIHEYRFTFRDVKEVTGPNWRGGVATIGVTREGKPETVLYAEKRY
                     YNTAGSMMTEAAIDGGITRDLYAALGEELENGAWAVRLYYKPFVRWIWAGGLMMALGG
                     LLCLFDPRYRKRVSPQKTAPEAV"
     gene            26791..27348
                     /gene="dsbE"
                     /locus_tag="JN001_001399"
     CDS             26791..27348
                     /gene="dsbE"
                     /locus_tag="JN001_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbE"
                     /protein_id="HAY9052681.1"
                     /translation="MKRKVLLIPLIIFLAIAAALLWQLARNAEGDDPTNLESALIGKP
                     VPKFRLESLDNPGQFYQADVLTQGKPVLLNVWATWCPTCRAEHQYLNQLSAQGIRVVG
                     MNYKDDRQKAISWLKELGNPYALSLFDGDGMLGLDLGVYGAPETFLIDGNGIIRYRHA
                     GDLNPRVWEEEIKPLWEKYSKEAAQ"
     gene            27345..28397
                     /locus_tag="JN001_001400"
     CDS             27345..28397
                     /locus_tag="JN001_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein CcmH"
                     /protein_id="HAY9052682.1"
                     /translation="MRFLLGVLMLMISGSALATIDVLQFKDEAQEQQFRQLTEELRCP
                     KCQNNSIADSNSMIATDLRQKVYELMQEGKSKKEIVDYMVARYGNFVTYDPPLTPLTV
                     LLWVLPVVAIGIGGWVIYARSRRRVRVVPDAFPEQSVPEGKRAGYIVYLPGIVVALIV
                     AGVSYYQTGNYQQVKIWQQATAQAPALLDRALDPKADPLNEEEMSRLALGMRTQLQKN
                     PGDIEGWIMLGRVGMALGNASIATDAYATAYRLDPKNSDAALGYAEALTRSSDPNDNR
                     LGGELLRQLVRTDHSNIRVLSMYAFNAFEQQRFGEAVAAWEMMLKLLSANDTRRAVIE
                     RSIAQAMQHLSPQESK"
     gene            complement(28432..29079)
                     /gene="narP"
                     /locus_tag="JN001_001401"
     CDS             complement(28432..29079)
                     /gene="narP"
                     /locus_tag="JN001_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite response regulator protein NarP"
                     /protein_id="HAY9052683.1"
                     /translation="MPEATPFQVMIVDDHPLMRRGVRQLLELDPSFEVVAEAGDGASA
                     IDLANRLDIDVILLDLNMKGMSGLDTLNALRRDGVTAQIIILTVSDASSDVFALIDAG
                     ADGYLLKDSDPEVLLEAIRAGAKGSKVFSERVNQYLREREMFGAEEDPFSVLTERELD
                     VLHELAQGLSNKQIASVLNISEQTVKVHIRNLLRKLNVRSRVAATILFLQQRGAQ"
BASE COUNT         6679 a         7219 c         8104 g         7250 t
ORIGIN      
        1 caactactat ggtgggcgca gcgaaacgga attaaccacc gcccaactga cgctgatcac
       61 cgatgaagga tcggtcaatg agaaacagga aacatttatt gtaccgatgc gtaatgctgg
      121 cgagctgacg ctggtgaaaa gttttgactg gtgatccatc ccttcacaca acctggctct
      181 ctcttttttc agataagact gctgggcgat ctgccgacgc caggatataa ccattaacaa
      241 gcgtcggcag attggtcatt tcttattttt cgtactgaga actgtccatc tactccggct
      301 ttcctggtta aggcaatggt ttctaagcga tacgcattat tgcaataatg acagaacatt
      361 gcggtaacac gcttttaccg ctaccttaac cacactccat cggtcacctg aggcggagct
      421 tcgccccttt gaaatacctt gcttcttttc gtacaaccct gaaagcctcg cgctacatgt
      481 tcagagcatt ggcgttagtg ctctggctgt tgattgcttt ttcatccgtt ttttacatcg
      541 ttaatgcgtt acatcagcga gaatcggaaa ttcgtcagga atttaatctg agttccgatc
      601 aggctcagcg ctttattcaa cgcacctctg atgtgatgaa agagctgaag tacatcgccg
      661 aaaatcgctt atcggcagaa aacggtgtgc tttccccgcg tggacgagaa acgcaggcgg
      721 atgtgcctgc gtttgaaccg ctgtttgccg actccgattg ttccgcaatg agtaacacct
      781 ggcgaggttc tctggagtca ttggcgtggt ttatgcgcta ctggcgcgat aatttttctg
      841 cggcttacga tctaaaccgg gtatttttaa tcggcagcga taacctctgc atggccaatt
      901 tcggtctgcg tgatatgcca gtggaacgcg ataccgcgtt gaaagctttg catgaacgca
      961 tcaataaata tcgaaatgca ccacaagatg atagcggcag taacctctac tggatcagcg
     1021 aaggtccgcg ccctggcgtc gggtattttt acgcgttgac gccagtttat ctggcgaacc
     1081 ggttgcaggc gcttttgggg gtcgagcaga ccatccggat ggagaacttt ttcttaccgg
     1141 gtacgttgcc gatgggggtt accattcttg atgaaaatgg tcataccctg atttcgctta
     1201 ccggaccaga aagtaaaatt aagggcgagc ctcgctggat gcaggaacgc tcctggtttg
     1261 gctatacgga agggttccgg gagctggtgc tgaagaaaaa tctgccaccc tcatcgctaa
     1321 gcatcgtgta ttcggtgccg gttgataagg tgctggaacg cattcgcatg ttgatcctta
     1381 acgcaatttt gctgaatgtg cttgccggag ctgcattgtt tactctcgca cggatgtacg
     1441 agcgacgtat tttcattccg gcggaaagcg acgccctgcg actggaagaa catgagcagt
     1501 tcaatcgcaa gattgtcgcc tccgcgccag tgggtatctg cattttgcgt accgctgatg
     1561 gcgtcaatat tttaagtaac gaactggcgc atacctatct caatatgctt acgcatgagg
     1621 accgccaacg actgacgcaa attatctgtg ggcagcaggt caattttgtt gatgtcctga
     1681 ccagcaacaa taccaatctg caaatcagct tcgtccattc gcgctatcgt aatgaaaacg
     1741 tggccatttg tgtgctggtg gatgtttctt cgcgcgtgaa gatggaagag tcgttgcagg
     1801 agatggcaca agcagcggaa caggcgagcc agtcaaaatc gatgttcctt gccaccgtca
     1861 gtcatgagct gcgaacgccg ctgtatggca ttatcggtaa cctggatctg ttgcaaacca
     1921 aagagttacc gaaaggcgtc gatcggctgg tgacggcaat gaacaactct tccagcctgt
     1981 tgttgaaaat tatcagcgat attctcgatt tctcgaagat tgaatcggaa cagttgaaga
     2041 tcgaaccgcg tgagttttca ccgcgtgaag tgatgaacca catcaccgcc aactatttac
     2101 cgctggtggt acgcaagcag ttaggcttgt actgctttat tgaaccggat gtgccagtgg
     2161 ccttaaatgg cgacccgatg cgtttacagc aggtcatctc caacctgttg agtaacgcca
     2221 taaaattcac cgataccggc tgtatagttt tgcatgtccg cgctgatggc gattatctct
     2281 ctatccgtgt tcgcgatacc ggcgtgggga ttccggcgaa agaagtggtg cgcttgtttg
     2341 atcccttctt ccaggtcgga acgggcgtac agcgaaactt ccaggggacc ggtctgggtc
     2401 tggcgatttg tgaaaaactg atcagcatga tggacggcga tatctcggta gattcagaac
     2461 cgggaatggg cagccagttt accgtgcgta ttccgttgta cggcgctcag tacccgcaga
     2521 aaaaaggcgt ggaagggttg agtggtaaac gctgctggct ggcggtccgc aatgcgtcgc
     2581 tctgtcagtt cctggaaact agtttgcagc gcagcggcat cgtcgttaca acatacgaag
     2641 ggcaggaacc gactcccgaa gatgtgttaa ttactgacga ggtagtgagt aaaaaatggc
     2701 agggtagagc ggtagtgacc ttctgtcgtc gccatattgg tattccgctg gagaaagcgc
     2761 caggggagtg ggtacacagt gtggctgccc cgcatgagct accggcattg ttggcgcgta
     2821 tttatttgat cgagatggag agcgacgatc ctgctaacgc tctgccgtcg acggacaaag
     2881 cggtcagcga taatgacgat atgatgattc tggtcgtgga tgatcatccg attaaccgac
     2941 gtctgctggc agatcagttg ggatcgttgg gctatcaatg taaaaccgcg aatgatggtg
     3001 tcgatgcgct taatgtactt agcaagaatc atattgatat cgtgcttagc gacgtcaaca
     3061 tgccaaatat ggatggttac cgcttgacgc aacgcattcg tcagttggga ctgacgttgc
     3121 cggtaatcgg agtaactgct aatgcgttgg ctgaagagaa gcagcggtgt ctggagtccg
     3181 gtatggacag ctgcctgtcg aagccggtaa cgctggatgt gataaaacag acgctgacgg
     3241 tatatgccga gagggtcagg aaatcgcggg aatcgtagga cggataaggt gtttatgtcg
     3301 catctggcat tcagtgcaaa tgccagatgc gacgctgacg cgtcttatct ggcctacttt
     3361 gatgtaatct gttgaaataa tgggaatcgt aggacgcata aggcgtttac gccgcatccg
     3421 gcaatcggtg caaatgccag ataagacact aacgcgtctt atctggccta caggtgatta
     3481 gtctttatct gccggactta acgtcactga agagagataa ttcagcaggg cgatatcgtt
     3541 ctcgacaccc agcttcatca tcgcagattt cttctggcta ctgatggttt taatactgcg
     3601 gttcagcttt ttagcgatct cggtcaccaa gaagccttcc gcaaacaggc gcagaacttc
     3661 actctctttt ggcgagagac gcttgtcacc gtaaccacca gcactgattt tttccaacag
     3721 gcgagaaacg ctttccgggg taaatttctt ccctttctgc agcgcggcga gagctttcgg
     3781 cagatcggtc ggtgcacctt gtttcagcac gatcccttcg atatccagat ccaataccgc
     3841 actaagaatc gccgggttgt tgttcatagt cagaacaatg atcgacaggc ttgggaaatg
     3901 gcgcttgatg tacttgatta aggtaatgcc atcgccgtac ttatcgccag gcatggagag
     3961 atcggtaatc aacacatgcg catccagttt cggcaggttg ttgatcagtg ctgtagagtc
     4021 ttcaaattcg ccgacaacat tcacccactc aatttgctca agtgatttgc gaataccgaa
     4081 caagactatc ggatggtcat cggcaataat tacgttcata ttgttcatgt aataggctac
     4141 cttgctacag caagctcttg acataactgt caatgtcgct gatgtatttt tctattcctg
     4201 gaacatcctt ctcacgaatc agatgttcca gcgtttcaca taactgcttg ccgggtacca
     4261 gatttagcat ggcaaatacg cctttaagac gatgagccgt ttgggctaac gcagcaaagt
     4321 cactggttgc tgcttcagta tacagcctct taacatcatc cggtactgtg tctacaaaga
     4381 gcgcataata gccgctggca tggagttgcg cattttcatc tccgcccaga ggcgattctg
     4441 tcacctcttc ctgcgccagt tgcacttcaa ttaattgtaa gaccgcttcc tgcatagcgt
     4501 tgctcatatt gaagttgacg cacaattgac caggcccaat ttcccgtacg ccagactcat
     4561 catcgcttaa aagcaagcca gaggcagtaa gattagacgg attatccgtt aaaaagatat
     4621 cataatcttg actaattaat ctttcatcgg gtgtgataca ggttgcaccc caattttcta
     4681 actggcgagt gacaatattc cgaatttctg ccgaagtaac atccaccatt acgcagacat
     4741 catccagtaa acgctcttct tcctcttcaa cttccgggtc agcggcgagc attttgatat
     4801 gcacagagta gcgtgtacca agcccatccc gcgttttgat gtttaaatga ccgcccagtt
     4861 tacgcgccag ttgatcgctc agccagaatg ccagcgggtc cgccttgcca tagcgatcgt
     4921 tttggggctg gttgataaac gggaagtgca aattatccat ttcatgaata cttacgcctt
     4981 ctcccgtgtc cagaatgcgg aatgtcaggc ggtcttcaga ggactcatcc tgatcaacct
     5041 caagggtgat ttttcccaat tgcgttgagg tcacggcata ttgcatcagt agcagcaaaa
     5101 tacgtcgtaa ggcatcgcga tcgccgcggc gcatatcgtg tgctttcaga tgattgttaa
     5161 tcagcagttg cagaccttta cgcttgatgg caggcaacac tgaaggcaca acttcatcaa
     5221 ttaaatcctg cacggagaac agcaccgtct cacttttcca gctatcgtcc gcaagcatgt
     5281 tcgctaactg tatttcatcg accagccgca ccagcacatc tgcctgattc gccagttgtt
     5341 tgctttccgg ggcgttgagt ttagccgcgc tctccgccag ggactgtgcg ggttctttca
     5401 gcgcatcgcc aatgtttttc ataaaggtca tccgcccctg ctggtttttc tcatacagac
     5461 gctgcgcctg cttgagtttc ttgtttacca gcacttcgcg atcctgatcg cgaataatga
     5521 aaatttgtgt gcgcggcgcg acctggctgc ggaacatgcg gatctcatac agctcgttat
     5581 tgatcgtcgc ctgaataatc ccctgatgct gttccgccat ggtggtgatg ttttgcagat
     5641 tcaaatgcgg cagcaaatga tcggcaattt tgttacttat gacagtgcgg ttcgattcct
     5701 gatcgtgaac cagcaggccg agcggcagca gtgagactat ctcttcatta attgcccgta
     5761 aaatgcgcaa ttcgttattg accgccgtgc tgggtagact ttctgtactg cggctggaga
     5821 aatggcggaa tgtggtatag ccaaataacg ccagcgccag caaaccgatg ttcagcagca
     5881 gtggcagcag aatgttttgc aacgtatcca gcaataaggt gccataagga acctgccaga
     5941 ccaggcgcat atcggtagag ttgagtgccg aggagatttc aatcttcgta ctgttaaagt
     6001 ggatactgac gctatccgtc ccttctttct cattatcatt gtctcccgtt gccgtcgcgt
     6061 ctggctcaag gcggaaactg tccagcggca tacccggtgg gatcaaatca ttaatcggta
     6121 gatcaaaagc tacgaccgtt gccagatgtc ccggctggtt gaacgtggta cgcaaggtaa
     6181 agtaatgacc gttctgccag gccaggcggc gcatgttaga aaaactttcg cgttcatcga
     6241 gggcgttggc ctgttgcaac atctctgcac gacgtgaatc aacaatgtcg ctgatggtcg
     6301 attctttaaa tccggaggtg agatctttga ggggcagggt tgagatcagc accagactgt
     6361 tatcctgacc attcaggtaa tacatcgacc acggtacatt ttctgcgccc cacaatgtgt
     6421 ccagataggt ggacatccgc tgagtcatct caagcgttga gttgtcgtga gagccaaaga
     6481 ttaacgcttc cgttttgcgg cgcggtttct ccagatagta gacatcctgt ttcaggcgcg
     6541 tctcttgtaa accttcgccg gaggaggggg aggttgtcgc ggcaatgttg tcgtagatct
     6601 gccaggtcac gtaacgccag gtattgacgc gcttttggat agcgtgggta atgtcgacaa
     6661 tctggtaact tttatctttc agccatgcgt taacggcgct ttgtaccatt acacccatcg
     6721 tcaccagtaa cacaatgatc aacagtaaaa agaagcgggt aatgctcccc ggtaggagtg
     6781 aaaagcgggt cgtggccgtt gtctctttct gacgcattcg tgtttatgac ctgttaaaac
     6841 ttcgcgaagt gatagggcag tataaagggt acagtgtgaa attccagact cttacctgat
     6901 tgatgattct ctattctccc gtgatattta tcatcctgca ttgggggaaa tagatgtaca
     6961 agcgccattt tgctgtacaa ataacctaca aaaagcccaa cgaaattaat tgcaaataaa
     7021 cgatgattgc tggaaattat gctgatgtta attatttgtg aaatagttaa caagcgttat
     7081 agtttttctg tggtagcaca gaataatgaa aagtgtgtaa agaagggtaa aaaaaaccgg
     7141 atgcgaggca tccggttgaa ataggggtaa acagacattc agaaatgaat gacggtaata
     7201 aataaagtta atgatgatag cgggagttat tctagttgcg agtgaaggtt ttgttttgac
     7261 attcagtgct gtcaaatact taagaataag ttattgattt taaccttgaa ttattattgc
     7321 ttgatgttag gtgcttattt cgccattcca caataatctt aaaaagttcc cttgtattta
     7381 cattttgaaa catctatagc gataaatgaa acatcttaaa agttttagta tcatattcgt
     7441 gttggattat tctgcatttt tggggagaat ggacttgccg actgattaat gagggttaat
     7501 cagtatgcag tggcataaaa aagcaaataa aggcatataa cagagggtta ataacatgaa
     7561 agttaaagta ctgtccctcc tggtcccagc tctgctggta gcaggcgcag caaacgctgc
     7621 tgaagtttac aacaaagacg gcaacaaatt agatctgtac ggtaaagtag acggcttgca
     7681 ctatttctct gacaacaagt cagaagacgg cgaccagacc tatgtacgtc ttggtttcaa
     7741 aggcgaaact caggttactg accagctgac cggttacggc cagtgggaat atcagatcca
     7801 gggcaatacc tctgaagaca acaaagaaaa ctcctggacc cgtgtggcat tcgcaggtct
     7861 gaaattccag gatgtaggtt ctttcgacta cggtcgtaac tacggcgttg tttacgacgt
     7921 aacttcctgg accgacgtac tgccagaatt cggtggcgac acctacggtt ctgacaactt
     7981 catgcagcag cgtggtaacg gcttcgcgac ctaccgtaac accgacttct tcggtctggt
     8041 tgacggtctg aactttgctg ttcagtacca gggcaaaaac ggtagcgtaa gcggcgaagg
     8101 catgaccaac aacggtcgtg gcgctctgcg tcagaacggc gacggtgtcg gcggttctat
     8161 cacttatgat tacgaaggct tcggtatcgg tgctgcagtt tccagctcca aacgtactga
     8221 tgatcaaaat ggtagctaca tcagcaatgg tgtagttcgt aactacatcg gtactggcga
     8281 ccgtgctgaa acctacactg gtggtctgaa atacgacgct aacaacatct acctggctgc
     8341 tcagtacacc cagacctaca acgcaactcg cgtaggttcc ctgggttggg cgaacaaagc
     8401 acagaacttc gaagctgttg ctcagtacca gttcgacttc ggtctgcgtc cgtctgtagc
     8461 atacctgcag tctaaaggta aaaacctggg tgtcatcaat agtcgtaact acgacgacga
     8521 agatatcctg aaatatgttg atgttggcgc gacctactac ttcaacaaaa acatgtccac
     8581 ctatgttgac tacaaaatca acctgctgga cgacaaccag ttcactcgtg acgctggcat
     8641 caacactgat aacatcgtag ctctgggtct ggtttaccag ttctaatctc gattgatatc
     8701 gaacaaaggg cctgcgggcc cttttttcat tgttttcagc gtacaaactc agttttttgg
     8761 tgtactcttg cgaccgttcg catgaggata atcacgtatg gaaataagct ttacccgcgt
     8821 ggcactgctg gctgccgcgc tcttctttgt tggttgcgat caaaaaccac aacccgccaa
     8881 aacccacgct actgaagtta ccgttcttga aggcaaaacc atgggtacct tctggcgtgc
     8941 cagcatcccg ggcattgatg ccaaacgcag tgccgaactt aaagaaaaga ttcagaccca
     9001 gctggacgcc gacgatcagc tgctttcgac ctataaaaaa gattccgcgc tgatgcgctt
     9061 taacgactcg caaagtttgt cgccgtggcc agtaagtgaa gcgatggccg aaatcgtcac
     9121 tacctcgctg cgcattggcg cgaagaccga tggtgcgatg gatattaccg tcgggccgct
     9181 ggtaaatctg tggggctttg gcccggaaca acagccggtt caaattccga gccaggaaca
     9241 gatcgacgag atgaaagcca aaactggttt acagcacctt acggtcatta atcagtcgca
     9301 tcagcaatat ctgcaaaaag acctgccgga tttatatgtc gatctctcta ccgtcggcga
     9361 aggttatgcg gcggatcact tggcacgctt gatggagcag gaagggattt cccgctatct
     9421 ggtgtcggtg ggcggcgcgc tgaacagccg tggtatcaac ggtgaaggcc tgccgtggcg
     9481 ggtagcgatt caaaaaccaa ccgataaaga aaacgcagtt caggctgtgg tggatatcaa
     9541 cggtcatggg attagcacct ctggcagcta ccgtaactat tacgaactgg acggcaaacg
     9601 tctttcccat gttatcgatc cgcaaaccgg gcgtcccatc gaacacaatc tggtatccgt
     9661 gacggtgatt gctccgacgg cgctggaagc cgatgcctgg gatactggct tgatggtact
     9721 cgggccggag aaagccaaag aggttgttcg ccgggaaggg ctggcggttt atatgatcac
     9781 caaagaaggc gatagcttta aaacctggat gtcaccacag tttaaaagct tccttgtcag
     9841 cgaaaaaaat taaagcgcaa gattgttggt ttttgcgtga tggtgaccgg gcagactaaa
     9901 ggctatcctt aaccagggag ctgattatga aaaacgccac atgcttaact gacgatcaac
     9961 gctggcaatc tgtcttagcc cgcgacccga atgccgacgg cgaattcgtt ttcgccgtgc
    10021 gcaccacagg catcttttgc cgtccgtctt gccgcgccag acatgccttg cgggaaaatg
    10081 tctccttcta cgcaaatgcc agcgaggcac tcgccgccgg atttcgcccc tgcaaacgct
    10141 gccaacctga taaagccaat gcccagcaac atcggttgga taaaatcacc cacgcgtgtc
    10201 gactgctgga acaggaaacg cctgtaacgt tggaagcctt agccgaccag gtggcgatga
    10261 gtccatttca tctacatcgg ttgtttaaag cgactaccgg aatgacgcct aaagcctggc
    10321 aacaggcctg gcgcgctcgc cgtttgcgcg aatcgctggc gaaaggggag agcgtgacga
    10381 cgtctattct taacgccgga ttccccgaca gcagcagtta ctaccgcaaa gccgatgaaa
    10441 cgctgggcat gacggctaaa caattccgtc acggtggcga aaatctggcg gtgcgttacg
    10501 cgctggctga ttgtgcgctg ggtcgttgcc tggtggcaga aagcgagcgg gggatttgcg
    10561 cgatattgct gggcgatgat gacgcgacat taatcagcga gttgcagcag atgtttcccg
    10621 ctgccgacaa cgcgcctgcc gatctgacgt ttcagcaaca tgtgcgtgaa gtgatcgcca
    10681 gcctcaatca acgcgatacg ccgctgacgt taccgctgga tattcgcggc actgcttttc
    10741 agcaacaagt ctggcaggca ctgcgcacga taccttgcgg tgaaaccgta ctggctaacg
    10801 ccatcggcaa accgaaagcg gtacgggccg ttgccagcgc ctgtgccgcc aacaagctgg
    10861 ctatcgtaat accctgtcat cgagtggtcg gtggtgatgg cacactttcc ggttaccgct
    10921 ggggcgtgtc tcgtaaagcg caactgctgc gccgcgaagc tgaaaatgag gagaggtaat
    10981 gttggatctg tttgccgatg ctgaaccgtg gcaagagcca ctggcggctg gtgcggtaat
    11041 tttacggcgt tttgctttta acgctgcgga gcaactgatc cgcgatatta atgacgttgc
    11101 cagccagtcg ccgtttcgcc agatggtcac ccccggggga tataccatgt cggtggcgat
    11161 gaccaactgt gggcatctgg gctggacgat ccatcggcaa ggttatctct attcgcccat
    11221 tgatccgcaa acaaataaac cgtggcccgc catgccacaa agctttcatg atttatgtca
    11281 acgtgcggct acggcggcgg gctatccaga tttccagcca gatgcttgtc ttatcaaccg
    11341 ctacgctcct ggcgcgaaac tgtcgctgca tcaggataaa gacgaaccgg atctgcgcgc
    11401 gccaattgtt tctgtttctc tgggcttacc cgcgattttt caatttggtg gcctgaaacg
    11461 taatgatccg ctcaaacgtt tgttgttgga acatggcgat gtggtggtat ggggcggtga
    11521 atcgcggctg ttttatcacg gtattcaacc gttgaaagcg gggttttatc cactcaccac
    11581 cgactgccgc tacaacctga cattccgtca ggcaggtaaa aaagaataaa aataagaatt
    11641 attattgctg tgcgcgcgaa gatgtttaaa ctgcgggctg taattcattg tccgggtttt
    11701 ctgcatggaa cttcttgtac ttgtctggcg gcagtatcgc tggccattta tcagtgtgat
    11761 ggcgctaagc ctcgccagtg cggcattagg cattggctta attgctttta tcaatcagcg
    11821 ccttatcgaa atggcggata ccagtctgct ggtattgccg gagtttctgg gattattgct
    11881 gctgttgatg gcagtcactc tcggatcgca actggcgctc accactttgg ggcatcactt
    11941 cgtttaccga ctgcgtagtg aatttatcaa gcggattctg gatacccacg tcgagcgcat
    12001 tgaacaactc ggtagcgcct cgttgttggc gggattaacc agcgatgtgc gcaatatcac
    12061 cattgctttt gtgcgtcttc cggaactggt gcaggggatc attctcacta tcggttccgc
    12121 ggcgtatctg tggatgctgt cgggcaaaat gttgctggta acggctatct ggatggcgat
    12181 caccatctgg ggtggttttg tactggtggc gcgggtgtac aaacatatgg cgaccctacg
    12241 tgaaaccgaa gacaagctgt acacggattt tcaaactgta cttgaagggc gcaaagagct
    12301 gactctgaac cgggaacgcg ccgagtatgt gtttaacaac ctctacatcc ccgatgcgca
    12361 agagtatcgc catcatatta ttcgcgcaga caccttccat cttagtgccg tgaactggtc
    12421 aaacatcatg atgctgggcg ctatcggcct ggtgttctgg atggcgaaca gtctcggttg
    12481 ggctgatacc aacgttgctg cgacctattc gttgacgctt ttattcctgc gtacgccgct
    12541 gctttcggcg gttggcgcat tgccgacgct gctgatggcg caggtggcgt ttaacaagct
    12601 gaacaaattc gcgctcgcgc ctttcaaagc agagtttccg cgcccgcagg cgtttcccaa
    12661 ctggcaaacg ctggagctgc gtaatgtgac gtttagctat caggataacg cgttttccgt
    12721 tggtccgatt aatctcacca tcaaacgtgg cgagctactg tttctgattg gtggtaacgg
    12781 tagtggaaaa tcgacgctgg cgatgttgtt gacgggcttg tatcagccac aaagcggcga
    12841 aatcttgctg gatggcaaac ctgtcagcgg cgaacaaccg gaagattatc gcaaactgtt
    12901 ttcggcagtg tttaccgatg tctggctttt tgatcaactg ctggggccgg agggtaaacc
    12961 cgctaacccg caactggttg agaagtggct ggcgcagctg aaaatggctc ataagcttga
    13021 gttaagcaac gggcgtattg ttaacctgaa gttatcaaaa gggcagaaaa aacgcgtggc
    13081 gctgttgctg gcgctggcag aagaacgcga tattatcctg ctggatgaat gggcggcgga
    13141 tcaggatcca cacttccgtc gtgagtttta tcaggtgttg ctgccgctga tgcaggagat
    13201 gggtaaaact attttcgcta tcagtcatga tgatcattac tttatccacg ccgaccgcct
    13261 gctggaaatg cgcaatgggc aacttagcga gctgacgggc gaagagcgcg atgccgcttc
    13321 gcgtgatgcc gttgcccgga cggcataata ttacgacgct gacctggcgg actgctgccg
    13381 tcaggtcaat atgctaaaaa tcccttcatt tctaataacc ctataattaa tcaacgaaat
    13441 tataatgttt ctaaaattag aatataattt ataaacatta tttaaatgtt gttacttaag
    13501 tgttaccttt gatgccgcgc aaatctcacc tgcaataaag cgactaaaag taaggcatta
    13561 acaagatgaa aaaagtgact gccatgctct tctcgatggc cgtggggctt aatgccgttt
    13621 cgatggcggc aaaagcgaaa gcgtccgagg agcaggaaac tgatgtactg ttgattggcg
    13681 gcggcattat gagcgccacg ttggggacct atttacgcga gctggagcct gaatggtcga
    13741 tgaccatgct ggagcgcctg gagggtgtcg cgcaggagag ttcgaacggc tggaataacg
    13801 ccggaaccgg gcattctgca ctgatggaac tgaactacac cccgcaaaac gccgatggca
    13861 gtatcagtat tgaaaaagca gtcgccatta acgaagcatt tcagatttcc cgccagttct
    13921 gggcgcacca ggtcgagcgc ggcgtgctgc gtactccgcg ttcatttatc aataccgttc
    13981 cgcatatgag ctttgtctgg ggcgaggata acgttaattt cctgcgcgcc cgttacgccg
    14041 cgttgcaaca aagctcgctg tttcgcggta tgcgttactc tgaagatcac gcgcagatca
    14101 aagagtgggc accgttagtg atggaagggc gcgatccgca acagaaagtg gcagccacgc
    14161 gtacggaaat tggtaccgat gtgaactacg gcgagatcac ccgccagtta attgcttcct
    14221 tgcagaagaa atctaacttc tcgctgcaac tcagcagcga agtccgcgcc ctaaagcgta
    14281 atgacgataa cacctggacc gttaccgttg ccgatctgaa aaatggcact gcacagaaca
    14341 ttcgtgccaa atttgtcttt atcggcgcgg gcggtgcggc gctgaagctg ttacaggaat
    14401 cggggattcc ggaagcgaaa gactacgccg gtttcccggt gggcggacag ttccttgttt
    14461 cggaaaaccc ggacgtggtt aatcaccatc tggcgaaggt ttacggtaaa gcatccgttg
    14521 gcgcaccacc gatgtcggtt ccgcatatcg atacccgcgt tctggacggt aaacgcgtag
    14581 tgctgtttgg gccatttgcc accttctcaa ccaaattcct caaaaacggt tcattgtggg
    14641 atctgatgag ttccaccacc acctctaacg tgatgccgat gatgcacgtc gggctggata
    14701 atttcgatct ggtgaaatat ctggtgagtc aggtgatgtt gagtgaagag gatcgttttg
    14761 aagcgttgaa agagtactat ccgcaggcga aaaaagagga ctggcgtttg tggcaagcgg
    14821 ggcagcgtgt gcagattatc aagcgtgatg ccgataaagg tggtgtactg cgtctgggta
    14881 ctgaagtggt cagtgaccag caagggacca ttgccgcgct cctgggagca tcgccagggg
    14941 cgtcaaccgc cgcgccgatt atgttggatc tgctggaaaa agtatttggc gatcgcgttt
    15001 ccagcccgca atggcaggct acgttgaaag cgatcgttcc gtcttatgga cgcaagctga
    15061 acggtgatgt agcggcaaca gaacgcgagt tgcagtacac cagcgaagtg ctggggctga
    15121 aatacgacaa gccgcaggca gcagatagta cgccaaaacc gcagttgaaa ccgcaacccg
    15181 ttcaaaaaga agtggcggat attgcgttgt aatgatgtgc cacatccggc atggtatgcc
    15241 ggatgtggcg tatactgata agacgcgcca gcgtcgcatc aggcaaccgg ctcgggcgtt
    15301 agatgttgga tgcggcgtaa ccgccttatc caaccaacgg ggtgccgtac ttcacaacag
    15361 tttagcgaac ttctgcgttg tcaattttct cttccgcctt ccagacgcgg tatttcacat
    15421 ctacattgtc tggcgtatac accacgatcg gcagcttgct gttgtaacgc agcattccag
    15481 catcgcccag atacgcggtg acaaatttct tctctttctt gccatccggg caggccatca
    15541 tcgtggaaac cggcgagcta actttatcaa agacataata atcatagccc cagccttcca
    15601 gcgttttgct ttccagcttc ccgccgagac gatgcaaatt gcaatcgact tccagcgtct
    15661 gaccgattaa cagttctact ttcagggtag attcatcttc ttgcggggtt aactgaatca
    15721 cctgacgctt catccctttt tcagcttgtg gataaggcgc gattttttcc agtggctgga
    15781 cgctttctgc cgcccaggcg gaagtggtag cgaaagcggc aaacaatact gcaggtagaa
    15841 tggtcttcat ttttttgctt tccttcttca tttataggtt ttcaccgatg atgtcgctga
    15901 aggttaacat attcataaga tttattaatt tgctttatga ataacttaaa gaatattcag
    15961 acaattttac ctgctctttt agtgttaaat tctgatgaga gaacaaacca gcagaaatat
    16021 ctctggtgaa ttaatcgcta tataaatatg tttataacca tttgaaatgt gagcaaaagc
    16081 ccgtttttgc cacgcttccc gccactcttt tgatcctgct acaggtttta ccccgatcgg
    16141 ggtatgcatc tttgacacat cctttaatat cttagcggtt ataaaaatgg cttattaatt
    16201 atgcggttta tttggtcgct ctcaattttc agagcgcgtt aatgatggaa ggtcaatgtg
    16261 aagattgatg catcccgtcg gggcatactc actggtcgct ggcgcaaagc cagtaacggt
    16321 atccgtccgc cctggtccgg tgatgaatct cattttctga cccattgcac ccgttgcgac
    16381 gcctgtatta atgcttgtga aaacaacatt ctgcaacgcg gcgcgggcgg ctatccgagc
    16441 gttaatttca aaaataacga gtgcagcttc tgttacgctt gcgcgcaggc ttgccccgaa
    16501 tcgctatttt ctccgcgcca caccagggcc tgggatttgc agttcaccat tggggacgcg
    16561 tgcctggcgt atcagtcagt tgaatgccgc cgctgtcagg atagctgtga gccaatggca
    16621 attatctttc gcccgacgct ctccgggatc taccagccgc aacttaatag ccaactttgc
    16681 aacggatgtg gagcatgtgc agccagctgt ccggtatcag ccataactgc ggagtatctc
    16741 catgcacact aactggcaag tttgcagcct ggtcgtgcag gccaaaagcg aacgaatttc
    16801 agacatcagc acccaactga acgcctttcc cggctgtgaa gttgctgtca gcgacgcgcc
    16861 gagcggtcag ttgattgtgg tggtggaagc agaagacagc gaaacgctga tccaaaccat
    16921 tgagtcagta cgcaacgtag agggcgtgct ggcggtgtcg ctggtttatc accagcagga
    16981 agagcaaggt gaggaaacac catgaaactc agtcgtcgta gctttatgaa agctaacgcc
    17041 gttgcggccg ctgcggcggc tgccggtctc agcgtgccgg gcgttgcccg cgccgttgtt
    17101 ggtcagcagg aagccatcaa atgggataaa gcgccgtgcc gtttctgcgg tactggttgc
    17161 ggcgttctgg tcggaacgca gcagggacgt gtggtggcct gtcagggcga cccagacgca
    17221 ccggttaacc gtggcctgaa ctgcattaag ggctatttcc tgcccaagat catgtacggt
    17281 aaagaccgtt tgacgcagcc gctgctgcgt atgaaaaacg gtaaatatga caaagaaggc
    17341 gaatttaccc taatcacctg ggatcaggcc ttcgatgtga tggaagagaa attcaaaacc
    17401 gccctgaaag aaaaagggcc ggaatcgatc ggtatgttcg gttctggtca gtggactatc
    17461 tgggaaggtt atgccgcgtc caagctgttt aaagcgggct tccgttcgaa caacatcgac
    17521 ccgaacgcgc gtcactgtat ggcgtcggca gtagttggct ttatgcgtac ctttggtatg
    17581 gatgagccga tgggctgcta tgacgacatc gagcaggctg acgcgtttgt gctgtggggc
    17641 gcaaacatgg cggagatgca cccgatcctc tggtcgcgca tcactaaccg tcgtctctct
    17701 aatcagaacg tcaccgtggc ggtgctttct acctaccagc atcgtagctt cgagctggcg
    17761 gataacggca tcatctttac gccacagtct gacctggtga tcctgaacta catcgccaac
    17821 tatatcattc aaaacaatgc gataaatcag gacttcttca gcaaacacgt taacctgcgc
    17881 aaaggggcga cggacattgg ctacggttta cgtccgaccc atccgctgga aaaagcagcg
    17941 aagaatccag gttctgacgc ctccgaaccg atgagctttg aagattacaa agccttcgtt
    18001 gccgagtata cgctggaaaa aactgccgaa atgaccggcg tgccgaaaga ccagttagaa
    18061 caactggcgc agctgtatgc cgatccgaac aagaaagtca tctcctactg gacgatgggc
    18121 ttcaaccagc atactcgtgg cgtgtgggct aacaacctgg tctacaacct gcacctgctg
    18181 accggcaaaa tttcccagcc gggttgcggt ccgttctccc tgaccgggca accttctgcg
    18241 tgtggtactg cgcgtgaagt gggcaccttt gctcaccgtc tgcctgcgga catggtggtg
    18301 accaacgaga aacaccgtga tatctgcgag aagaagtgga atatcccgag cggcaccatt
    18361 ccggcgaaaa tcggtctgca cgcggtggca caagaccgtg cgctgaaaga cggcaaactg
    18421 aatgtttact ggaccatgtg taccaacaac atgcaggccg ggccgaacat caatgaagag
    18481 cgtatgccgg gctggcgcga tccgcgcaac ttcatcatcg tctccgatcc gtatccgaca
    18541 gtcagtgcgc tggccgccga cttgatcctg ccgaccgcaa tgtgggtaga gaaagagggc
    18601 gcttacggta acgccgaacg ccgtactcag ttctggcgtc aacaggtaca ggcaccgggc
    18661 gaagcgaaat cggatctctg gcagttagtc cagttctccc gccgcttcaa aactgaagaa
    18721 gtatggccgg aagatctgct ggcgaagaaa ccggaactgc gtggcaaaac gctgtacgaa
    18781 gtgctgtatg ccacaccgga agtgagcaaa ttcccggtat ccgaactggc ggaagatcag
    18841 ctgaacgatg aatcccgcga gctgggcttc tatctgcaaa aagggctgtt cgaagagtac
    18901 gcatggtttg gtcgcggtca cggtcacgat ctggcaccgt tcgatgacta ccacaaagcg
    18961 cgcggtctgc gctggccggt ggtgaacggt aaagaaacgc agtggcgtta cagcgaaggt
    19021 aacgacccgt acgtgaaagc gggcgaaggc tataagttct acggcaaacc ggatggcaaa
    19081 gcggtgatct tcgcactgcc attcgaaccg gcggcggaag caccggatga agagtacgac
    19141 ctgtggctct ctaccggacg cgttctggag cactggcaca ccggcagtat gactcgccgt
    19201 gtaccagaac tgcaccgcgc cttcccggaa gcggtcctgt ttattcaccc gctggatgcg
    19261 aaagcgcgcg atctgcgtcg tggcgacaaa gtgaaagtgg tttctcgccg tggcgaagtg
    19321 atctcgattg tcgaaacgcg cggtcgtaac cgtccgccgc agggcctggt gtacatgccg
    19381 ttcttcgacg ccgcacagct ggttaacaaa ctaacgcagg acgcgaccga tccgctctcg
    19441 aaagagacgg acttcaagaa gtgcgcagtc aaactggaga aggtgtaagc cattatgtcc
    19501 cggtcagcga aacctcaaaa tggtcgccgc cgctttctgc gcgatgttgt tcgcacagca
    19561 ggcgggctgg ctgccgtggg tgtggcgctg gggttacaac agcaaaccgc acgcgcatct
    19621 ggcgtgcggt tgcgcccgcc cggagccata aacgagaacg cctttgccag tgcctgtgtg
    19681 cgttgcggtc agtgtgttca ggcttgccct tacgacacct taaaactggc gacgctggcc
    19741 tctggtctgt cggcgggcac gccatatttt gtcgcacggg atattccttg cgaaatgtgt
    19801 gaggacattc cgtgcgccaa agtgtgcccg agcggtgcgc tggatcgtga gatcgaatcg
    19861 atcgacgacg cgcggatggg gctggcggta ctggtggacc aggaaaactg tctcaacttt
    19921 caggggctgc gctgcgatgt ttgttatcgc gaatgcccga aaattgatga ggccatcacc
    19981 ctggagctgg agcgcaacac gcgtaccggt aagcacgccc gctttctgcc gacggttcac
    20041 agagacgcct gtaccggttg cggtaagtgc gaaaaagtgt gcgtgctgga acaaccggca
    20101 atcaaggtgt taccgctgtc actggctaaa ggggagttag gtcaccatta ccgcttcggc
    20161 tggctggagg ggaacaatgg caaatcgtaa acgtgacgcc gggcgcgagg cgctggagaa
    20221 aaaaggctgg tggcgcagtc accgttggct ggtgttacgt cgcctttgtc agttcttcgt
    20281 gctggggatg tttttgagcg gtccgtggtt tggtgtgtgg atcttacacg gtaactacag
    20341 cagtagcctg ttattcgaca ccgttccgct gaccgatccg ctgatgacgc tgcaaagtct
    20401 tgccagcggt catctgcctg ccacggtggc gttgaccggt gcggtgatta tcaccgtgct
    20461 ctacgccctg gcaggaaagc gattattttg cagctgggtc tgcccgctga atccgattac
    20521 cgacttagcg aactggttac gcaggcgctt tgacctcaat cagtctgcga cgatccctcg
    20581 ccacattcgc tacgtgctgt tggtggtcat tctgctggga tcggccttaa ctggcacgct
    20641 catctgggaa tggatcaacc ccgtatctct gatggggcgc agcctggtag tgggcttcgg
    20701 cagcggcgcg ctgcttattc tcgcgctgtt tttatttgat ctactggtcg ttgaacacgg
    20761 ctggtgcggg cacatttgtc cggttggcgc gctgtatggc gtgctgggta gcaaaggtgt
    20821 gattaccgtt gcggccaccg atcggcagaa atgtaactgc tgtatggatt gttttcatgt
    20881 ttgcccggaa ccgcgtgtgc tacgtgcccc ggtgctggat gaacaaagcc cggtgcaggt
    20941 caccagccgc gattgcatga cgtgcggtcg ctgcgtggat gtctgttctg aggatgtatt
    21001 tacaataact acacgatgga gttcgggagc gaaatcatga aaagccatga cctgaagaaa
    21061 gcgctgtgtc aatggacggc gatgctggcc ctggtggtaa gcggcgcggt ttgggcggct
    21121 aatggcgtcg attttagcca gtcgccggaa gtatccggga cacaggaagg ggccattcgg
    21181 atgccaaaag agcaggaacg gatgccgctg aactatgtga atcagccgcc aatgatcccg
    21241 catagcgttg aaggttatca ggtaacgacc aataccaacc gctgcttgca gtgccacggt
    21301 gtcgaaagtt atcgcaccac tggcgcgccg cgcattagtc ctactcactt tatggacagc
    21361 gacggcaaag tgggcgcgga agtggctccg cgtcgttatt tctgtctgca atgtcacgta
    21421 ccgcaggccg ataccgcgcc aatcgtgggg aataccttta ccccatcaaa aggttacggg
    21481 aaataagagg ttattatggg aaattctgac cgtaagcctg gtctgattaa gcgcctgtgg
    21541 aaatggtggc gtacccccag ccgtctggcg ctggggacgc tgctgttgat cggttttgtt
    21601 ggcggcatcg tcttctgggg tggctttaac accgggatgg aaaaagccaa taccgaagag
    21661 ttctgcatta gctgccacga aatgcgcaac acggtatatc aggaatacat ggattccgtg
    21721 cactacaaca accgtagcgg cgtccgtgcg acctgtccgg attgtcacgt tccgcacgag
    21781 tttgtgccga agatgatacg caagctcaaa gcaagtaaag agctgtatgg taaaattttt
    21841 ggcgttattg acacgccgca gaaatttgaa gctcatcgtc tgacgatggc acagaatgag
    21901 tggcggcgca tgaaggacaa taactcgcag gagtgccgta actgtcacaa cttcgagtat
    21961 atggatacaa ccgcccagaa atcggttgcc gcgaagatgc atgaccaggc ggtgaaagat
    22021 gggcaaacct gtattgattg ccataaaggg atagcgcaca agctgcccga tatgcgtgaa
    22081 gtcgagccag gtttttaaca gggttattgc gtgggtatgc ttgaagccag agagttactt
    22141 tgtgagcggg atgaacgaac cttatttagt ggcttgtcat ttacgctgaa cgcaggagag
    22201 tgggtacaaa tcaccggtag caacggcgcg gggaagacaa cgcttctccg tttgctgacg
    22261 gggttgtctc gccctgacgc aggcgaggtt ctctggcaag ggcagccctt gcatcaggta
    22321 cgcgacagct accatcaaaa cctgttatgg ataggccatc agccggggat caaaacccgg
    22381 ctgacggcgt tagaaaatct gcacttttat catcgcgatg gcgataccgc acaatgtctg
    22441 gaagccctgg cgcaggccgg gcttgccgga ttcgaagata ttcctgtaaa tcagctctcg
    22501 gccgggcaac aacgccgcgt cgctttagcg cgtctgtggc tgacccgtgc cacgttatgg
    22561 atcctcgacg agccttttac cgcgattgac gttaacggcg tcgatcgtct gacccagcgt
    22621 atggcgcagc atacggagca gggggggatt gtgattctga ctacccacca gccgctcaac
    22681 gttgctgaaa gtaaaattcg ccgcatttca ctgacgcaaa cgagggccgc atgatgttct
    22741 ggcgcatttt ccgtcttgag ctgcgtgtag cgtttcgcca tagcgccgaa atcgccaacc
    22801 cgctgtggtt cttcctgatt gtaattaccc tttttccgct cagtatcggt ccggagccgc
    22861 aactgctggc gcgtattgca ccgggcatta tctgggttgc tgcgctgctt tcatccttgc
    22921 tggcgctgga acgactgttc cgtgacgatt tgcaggacgg cagtcttgaa caattgatgt
    22981 tgttgccgtt acccttgccc gccgttgtgc tggcgaaggt gatggcgcac tggatggtaa
    23041 ccggtctgcc gttactcatc ctttcgccac tggtagcaat gctactggga atggatgttt
    23101 atggctggca agtgatggcg ctgacgctgc tgctgggaac gcctacgctt ggctttctcg
    23161 gtgcaccggg tgtggcgttg acagtgggac ttaagcgcgg tggtgtgctg ctcagcatac
    23221 tggtgttacc gctgactatc ccattactca tctttgccac cgccgcgatg gacgcggctt
    23281 ccatgcattt gcccgttgac gggtatctgg caattttagg cgcgttgctg gcaggcaccg
    23341 cgacattaag tccttttgcg acggcggcag cgttacgaat cagcattcaa taacgctgga
    23401 ttactgattt ttgttcgagt ctggtatcga aactatgtgg aaaacactgc atcaactggc
    23461 gatcccacca cggctgtatc aaatctgtgg ctggtttata ccgtggctgg caattgccag
    23521 tgtggtcgtg cttaccgtcg gctggatctg gggattcggc tttgctccgg ctgattatca
    23581 gcagggaaat agctaccgca ttatctacct gcatgtgcct gcggcgatct ggtcgatggg
    23641 tatttatgca tcaatggcgg tggcggcgtt tattggcctt gtctggcaga tgaaaatggc
    23701 caacctggcg gtggcggcga tggcccccat tggtgccgtg tttaccttta ttgccctggt
    23761 taccggctct gcatggggaa aaccgatgtg gggcacctgg tgggtatggg atgcacgtct
    23821 gacttctgaa ctggtgctgc tgtttttgta tgtgggtgtg attgccctgt ggcacgcctt
    23881 cgacgaccgc cgtctggcgg gccgtgcggc aggtatcctg gtgctgattg gcgtggtgaa
    23941 tctgccgatt attcattact ccgtggagtg gtggaacacc ctgcatcagg gatcaacgcg
    24001 gatgcagcaa agtatcgatc cggcgatgcg ttcgccgctg cgctggtcga tttttggctt
    24061 cctgctcctg tctgccacgc tgacgctgat gcggatgcgt aatttgattt tgctgatgga
    24121 aaaacgccgt ccgtgggtga gtgaactgat actgaaaaga ggccgtaaat gacccttgca
    24181 tttgcttcct ggaatgaatt tttcgcaatg ggcggttacg ccttttttgt ctggctggcg
    24241 gtggtgatga ccgttattcc gctggtggtt ttggtcgtgc actcggtgat gcagcatcgc
    24301 gcaattctgt gtggtgtgga gcaacagcgg gcgcgtgagg cgcgtttacg tgctgcgcaa
    24361 cagcaggagg ctgcatgaat attcgccgta aaaaccgctt gtggattgcc tgtgctgtgt
    24421 tggcaggttt ggcgctgacc atcggtctgg tgctgtatgc gctgcgctcg aatatcgatc
    24481 tcttttatac gccgggggaa attctctacg gcaagcgtga aactcagcaa atgccggaag
    24541 tcggtcagcg tctgcgcgtt ggcgggatgg tgatgccggg tagtgtgcag cgcgatccca
    24601 attcgctgaa agtgaccttc accatttacg acgctgaagg ctcagtggat gtctcttacg
    24661 aaggcatttt gccggatctg ttccgtgaag ggcagggcgt tgtggtgcag ggcgagctgg
    24721 aaaaaggcaa tcatatcctc gcgaaagaag tgctggcgaa acacgacgaa aactacacgc
    24781 cgccagaagt tgagaaagcg atggaagcta accaccgtcg cccggcgagt gtttataagg
    24841 acccagcatc atgatgccgg aaattggaaa cgggctgctg tgcctggcgc tgggaattgc
    24901 gctgctgctg tccgtgtatc cgctatgggg cgtggcgcgc ggagatgcgc gcatgatggc
    24961 gtcttcccgc ttgtttgcct ggctgctgtt tatgtctgtg gctggcgcat ttctggtgct
    25021 ggtcaatgct ttcgtggtca acgactttac cgtcacctat gttgccagca actccaatac
    25081 ccagcttccg gtgtggtatc gcgtggcggc tacctggggc gcgcatgaag gttcgcttct
    25141 gctgtgggtg ctgctgatga gcggctggac ctttgcggtg gcgattttta gtcagcgtat
    25201 tccgctggat attgtggccc gtgtactggc gataatgggg atggtcagcg tcggcttttt
    25261 gctgttcatt ctctttacct ctaacccgtt ctcacgcacg ctgccgaact tcccaattga
    25321 agggcgcgat cttaacccgc tgttacagga tccggggctg atcttccatc cgcctctgct
    25381 ttatatgggg tacgtgggtt tctcggtggc gtttgctttt gccattgctt ctttgctgag
    25441 cgggcgtctg gacagcactt atgcgcgttt tactcgcccg tggacgctgg cggcgtggat
    25501 tttcctgacg ctcggcattg tgctcggttc cgcatgggcc tattacgaac tcggctgggg
    25561 gggctggtgg ttctgggatc cggtagaaaa cgcctcgttt atgccgtggc tggtggggac
    25621 tgcgctgatg cactcactgg cggtcactga acaacgcgcc agcttcaaag cgtggacatt
    25681 actgctggca atcagtgcct tctcgttgtg tctgctgggg actttcctgg tgcgttccgg
    25741 cgtgctggta tcggtacacg cgtttgcctc tgatccggca cgcggtatgt ttatcctcgc
    25801 ctttatggta ctggtgattg gtggttcgct gctgctgttt gccgcgcgtg gacacaaagt
    25861 tcgctcacgc gtaaacaatg cgctgtggtc gcgggaatct ctgctgttag cgaacaacgt
    25921 tttgttggtc gccgcgatgc tggtggtatt actggggacg ctgctgccgc tggtgcacaa
    25981 gcaactggga ctgggcagta tttcgattgg cgaaccgttc ttcaacacca tgtttacctg
    26041 gctgatggtg ccgtttgcgc tgctgcttgg tgtcggtcct ctggtgcgct gggggcgcga
    26101 tcgcccacgt aaaatccgca atttattgat tatcgccttc atctcaacgc tggtgctgtc
    26161 gctgctgctg ccgtggctgt tcgaaagcaa agttgtggcg atgacggtgc tcggcctggc
    26221 aatggcctgc tggattgctg tgctggcaat tgcggaagct gcgctgcgta tttcacgtgg
    26281 cacgaaaacc accttcagtt attggggaat ggtggcggct cacctggggc tggcagtgac
    26341 aattgttggt attgccttta gccagaacta tagcgttgag cgtgatgtgc gcatgaagtc
    26401 cggcgatagc gtcgatattc atgaatatcg cttcaccttc cgtgatgtca aagaggtgac
    26461 tggcccgaac tggcgcggcg gtgtggcgac tattggcgta acgcgagagg gtaaaccgga
    26521 aacggtgctg tatgcggaaa aacgttatta caacactgcc gggtcgatga tgaccgaagc
    26581 ggcgattgac ggcggcatca cgcgtgacct gtacgccgcg ctcggtgaag agctggaaaa
    26641 cggcgcgtgg gccgtgcgtc tttactacaa accgtttgtt cgctggattt gggcgggcgg
    26701 gctgatgatg gcgttgggcg gactgctgtg tctgtttgat cctcgctatc gtaagcgcgt
    26761 gagtccgcaa aaaactgcgc cggaggctgt atgaagcgca aagtattgtt aattccgttg
    26821 attatcttcc tggcgattgc cgcggcgctg ctgtggcagc tggcgcgtaa tgccgaaggg
    26881 gatgatccga ccaatctgga atcggcgctc attggcaagc cagtgccgaa gtttcgcctc
    26941 gaatcactgg acaatccggg gcagttttat caggcggatg tgctgactca gggcaaacct
    27001 gtgctgctta acgtttgggc tacctggtgt ccgacctgcc gtgcggaaca tcaatatctg
    27061 aatcagcttt ctgcgcaggg cattcgcgtg gtcggcatga actataaaga cgatcgccag
    27121 aaggcaataa gctggctgaa agagctgggc aatccttacg cgctaagcct gtttgatggc
    27181 gatggcatgt tagggctgga tctcggtgtc tatggcgcgc cagaaacgtt cctcatcgac
    27241 ggcaacggca tcattcgcta tcgccatgcg ggcgatctca atcctcgcgt ctgggaagaa
    27301 gagatcaagc cgctgtggga gaaatacagt aaggaggccg cacaatgagg tttttattgg
    27361 gcgtgctgat gctgatgatc tccggctcag cgctggcgac catcgacgtg ttgcagttta
    27421 aggatgaagc gcaggagcag cagttccgcc aactcactga agaactacgc tgcccgaaat
    27481 gccagaacaa cagcattgcc gattccaact cgatgattgc caccgacctg cgccagaaag
    27541 tgtatgaact gatgcaggaa ggtaaaagta aaaaagagat tgtcgattat atggtggcgc
    27601 gttacggcaa cttcgtcact tacgatccgc cgttaacgcc gctgaccgtg ctgctgtggg
    27661 tgcttccggt agtggctatt ggcattggcg gttgggtcat ttacgcccgt tcgcggcgtc
    27721 gggtacgcgt ggtgccggac gcgtttcctg aacaaagcgt gccggaaggt aagcgtgccg
    27781 gatatattgt ttatctgccg ggtattgtgg tggcgttaat tgtggctggc gtcagctact
    27841 accagactgg caattatcag caggtgaaaa tctggcagca ggccacggca caggctccgg
    27901 cgttgctgga cagggcgctg gatccgaaag ccgatccgct caacgaagaa gagatgtcgc
    27961 gtcttgcgct ggggatgcgt actcaactgc aaaaaaatcc gggagatata gaaggctgga
    28021 ttatgttggg ccgcgttggc atggcgctgg gtaacgccag tatcgccacc gatgcatacg
    28081 ctactgcgta tcgcctcgat ccgaaaaaca gtgatgccgc actgggttat gctgaagcgt
    28141 tgacacgttc atctgatccc aacgacaacc gcctcggtgg tgaactgctg cgccagttgg
    28201 tgagaacgga ccatagcaat atccgtgtgt taagcatgta tgcgtttaat gcctttgagc
    28261 agcagcgatt tggcgaagcc gttgccgcgt gggagatgat gttgaaactc ttatctgcca
    28321 acgatactcg ccgtgcggtg attgaacgta gtatcgcgca ggcgatgcaa catttgtcgc
    28381 cgcaggagag taaataaaaa gaggcccgat ggtgatgcca tcgggctatt tttattgtgc
    28441 cccgcgttgt tgcaggaaca gaatggtggc tgccacgcgt gagcggacat tgagtttgcg
    28501 cagcagattg cgaatatgta cttttactgt ctgctctgaa atattcaaca ccgaggcaat
    28561 ctgtttattt gacagcccct gtgccagctc gtgcagaaca tccagctcgc gctccgtcag
    28621 cacgctgaag ggatcttctt ccgcgccaaa catttcacgt tcacgtaagt actgattgac
    28681 gcgttcgcta aagactttgc tgcctttcgc tccagcacga attgcttcca gcaatacttc
    28741 cgggtcgctg tctttcaaca gataaccgtc tgcgcctgcg tctatcagcg caaagacatc
    28801 gctggaggca tctgatacgg tcaggataat aatttgcgcg gtaacgccat ccctgcgcaa
    28861 ggcattgagg gtatccaggc cactcatacc tttcatattg agatccagca agatcacgtc
    28921 gatatccagt ctatttgcca gatcgatcgc gctcgcgccg tcgcccgctt cggcgaccac
    28981 ttcaaagcta ggatcaagct ccagtaactg acgaacaccg cgtcgcataa gtggatgatc
    29041 atccacaatc atcacctgaa aaggcgttgc ttcaggcata gtagtctcct ggggttttat
    29101 tagaatcatt atgtttgagc gtagcgttgg taacgctacc aggcgcgtga atgttacccc
    29161 attttatgta tggacatgta gtgaaaacta caaccttgtc gttcgctttg gcatcatttt
    29221 cattataaag acggaatttt gcatcagctt ct
//
LOCUS       DADMJE010000035        29058 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.036, whole genome shotgun sequence.
ACCESSION   DADMJE010000035 DADMJE010000000
VERSION     DADMJE010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 29058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29058
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.036"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            162..605
                     /locus_tag="JN001_001402"
     CDS             162..605
                     /locus_tag="JN001_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004997737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9052684.1"
                     /translation="MDLALVTGQREGDLAAMRWEDIRDGRLYVEQQKTGAKIRISLPT
                     TISRLNLTLTDVLDNLKKINGKNEKLLGGKTARTIAAQFRIARDTSGLKWEGDPPPFH
                     EIRSLSGRLHSAEKGSDFTQALLGHRSSSMTDKYRDGRGREWKDI"
     gene            841..1659
                     /locus_tag="JN001_001403"
     CDS             841..1659
                     /locus_tag="JN001_001403"
                     /EC_number="3.1.3.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphatase"
                     /protein_id="HAY9052685.1"
                     /translation="MTTRVIALDLDGTLLTPKKTLLPSSIEALARAREAGYQLIIVTG
                     RHHVAIHPFYQALALDTPAICCNGTYLYDYHAKTVLEADPMPVNKALQLIEILNEHHI
                     HGLMYVDDAMVYEHPTGHVIRTSNWAQTLPPEQRPTFTQVASLAETAQQVNAVWKFAL
                     THDDMPQLQHFGKHVEHELGLECEWSWHDQVDIARGGNSKGKRLTKWVEAQGWSMENV
                     VAFGDNFNDISMLEAAGTGVAMGNADDAVKARANIVIGDNTTDSIAQFIYSHLI"
     gene            complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JN001_001404"
     CDS             complement(1660..2718)
                     /gene="modC"
                     /locus_tag="JN001_001404"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein
                     ModC"
                     /protein_id="HAY9052686.1"
                     /translation="MLELNFSQTLGNHCLTINETLPANGITAIFGVSGAGKTSLINAI
                     SGLTRPQKGRIVLNGRVLNDAEKGICLTPEKRRVGYVFQDARLFPHYKVRGNLRYGMA
                     KSMVDQFDKLVALLGIEPLLDRLPGSLSGGEKQRVAIGRALLTAPELLLLDEPLASLD
                     IPRKRELLPYLQRLTREINIPMLYVSHSLDEILHLADRVMVLENGQVKAFGALEEVWG
                     SSVMNPWLPKEQQSSILKVTVLEHHPHYAMTALALGDQHLWVNKLDEPLQAALRIRIQ
                     ASDVSLVLQPPQQTSIRNVLRAKVVNSYDDNGQVEVELEVGGKTLWARISPWARDELA
                     IKPGLWLYAQIKSVSITA"
     gene            complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JN001_001405"
     CDS             complement(2721..3410)
                     /gene="modB"
                     /locus_tag="JN001_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HAY9052687.1"
                     /translation="MILTDPEWQAVLLSLKVSSLAVLFSLPFGIFFAWLLVRCTFPGK
                     ALLDSVLHLPLVLPPVVVGYLLLVSMGRRGFIGERLYDWFGITFAFSWRGAVLAAAVM
                     SFPLMVRAIRLALEGVDVKLEQAARTLGAGRWRVFFTITLPLTLPGIIVGTVLAFARS
                     LGEFGATITFVSNIPGETRTIPSAMYTLIQTPGGESGAARLCIISIALAMISLLISEW
                     LARISRERAGR"
     gene            complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JN001_001406"
     CDS             complement(3410..4183)
                     /gene="modA"
                     /locus_tag="JN001_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9052688.1"
                     /translation="MARKWLNLFAGAALSFAVAGNTLADEGKITVFAAASLTNAMQDI
                     ATQYKKEKGVDVVSSFASSSTLARQIEAGAPADLFISADQKWMDYAVDKKAIDTASRQ
                     TLLGNSLVVVAPKASEQKDFIIDSTTNWTSLLNGGRLAVGDPEHVPAGIYAKEALQKL
                     GAWDTLSPKLAPAEDVRGALALVERNEAPLGIVYGSDAVVSKGVKVVATFPEDSHKKV
                     EYPVAVVEGHNNATVKAFYDYLKGPQAAEIFKRYGFTTK"
     gene            complement(4349..4498)
                     /locus_tag="JN001_001407"
     CDS             complement(4349..4498)
                     /locus_tag="JN001_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux pump-associated protein, AcrZ
                     family"
                     /protein_id="HAY9052689.1"
                     /translation="MLELLKSLVFAVIMVPVVMAIILGLIYGLGEVFNIFSGVGKKDQ
                     PGQNH"
     gene            4627..5415
                     /gene="modE"
                     /locus_tag="JN001_001408"
     CDS             4627..5415
                     /gene="modE"
                     /locus_tag="JN001_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum-dependent transcriptional regulator"
                     /protein_id="HAY9052690.1"
                     /translation="MQAEILLTLKLQQKLFADPRRISLLKHIALSGSISQGAKDAGIS
                     YKSAWDAINEMNQLSEHILVERATGGKGGGGAVLTRYGQRLIQLYDLLAQIQQKAFDV
                     LSDDDALPLNSLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKV
                     AITAQSGARLGLDEGKEVLILLKAPWVGITQDEAVAQNANNQLPGIISHIERGAEQCE
                     VLMALPDGQTLCATVPVNEATSLQQGQNVTAYFNADSVIIATLC"
     gene            5483..6955
                     /gene="modF"
                     /locus_tag="JN001_001409"
     CDS             5483..6955
                     /gene="modF"
                     /locus_tag="JN001_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter ATP-binding protein
                     ModF"
                     /protein_id="HAY9052691.1"
                     /translation="MSSLQILQGTFRLSDTKTLQLPQLTLNAGDSWAFVGSNGSGKSA
                     LARALAGELPLLKGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLGPGEDDTGRTT
                     AEIIQDEVKDAPRCMQLAQQFGITALLDRRFKYLSTGETRKILLCQALMSEPDLLILD
                     EPFDGLDVASRQQLAERLASLHQSGITLVLVLNRFDEIPEFVQFAGVLADCTLAETGA
                     KEELLQQALVAQLAHSEQLEGVQLPEPDEPSARHALPANEPRIVLNNGVVSYNDRPIL
                     NNLSWQVNPGEHWQIVGPNGAGKSTLLSLVTGDHPQGYSNDLTLFGRRRGSGETIWDI
                     KKHIGYVSSSLHLDYRVSTTVRNVILSGYFDSIGIYQAVSDRQQKLVQQWLDILGIDK
                     RTADAPFHSLSWGQQHLALIVRALVKHPTLLILDEPLQGLDPLNRQLIRRFVDVLISE
                     GETQLLFVSHHAEDAPACITHRLEFVPDGGLYRYVLTKIY"
     gene            7216..8232
                     /gene="galE"
                     /locus_tag="JN001_001410"
     CDS             7216..8232
                     /gene="galE"
                     /locus_tag="JN001_001410"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308814.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HAY9052692.1"
                     /translation="MRVLLTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI
                     ERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVN
                     GTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQIL
                     TDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIF
                     GNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGIGSSVLDVVNAF
                     SKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRTLDEMAQDTWHWQSRHPQ
                     GYPD"
     gene            8242..9288
                     /gene="galT"
                     /locus_tag="JN001_001411"
     CDS             8242..9288
                     /gene="galT"
                     /locus_tag="JN001_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-phosphate uridylyltransferase"
                     /protein_id="HAY9052693.1"
                     /translation="MTQFNPVDHPHRRYNPLTGQWILVSPHRAKRPWQGAQETPAKQV
                     LPAHDPDCFLCAGNVRVTGDKNHDYTGTYVFTNDFAALMSDTPDAPESNDPLMRCQSA
                     RGTSRVICFSPDHSKTLPELSVAALTEIVKTWQEQTAELGKTYPWVQVFENKGAAMGC
                     SNPHPHGQIWANSFLPNEAEREDRLQKEYFAEQKSPMLVDYVQRELADGSRTVVETEH
                     WLAVVPYWAAWPFETLLLPKAHVLRITDLTDAQRSDLALALKKLTSRYDNLFQCSFPY
                     SMGWHGAPFNGEENQHWQLHAHFYPPLLRSATVRKFMVGYEMLAETQRDLTAEQAAER
                     LRAVSDIHFRESGV"
     gene            9292..10440
                     /gene="galK"
                     /locus_tag="JN001_001412"
     CDS             9292..10440
                     /gene="galK"
                     /locus_tag="JN001_001412"
                     /EC_number="2.7.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001713229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactokinase"
                     /protein_id="HAY9052694.1"
                     /translation="MSLKEKTQSLFANAFGYPATHTIQAPGRVNLIGEHTDYNDGFVL
                     PCAIDYQTVISCAPRDDRKVRVMAADYENQLDEFSLNAPIVAHENYQWANYVRGVVKH
                     LQLRNNSFGGVDMVISGNVPQGAGLSSSASLEVAVGTVLQQLYHLPLDGAQIALNGQE
                     AENQFVGCNCGIMDQLISALGKKDHALLIDCRSLGTKAVSMPKGVAVVIINSNFKRTL
                     VGSEYNTRREQCETGARFFQQPALRDVTIEEFNAVAHELDPIVAKRVRHILTENARTV
                     EAASALEQGDLKRMGELMAESHASMRDDFEITVPQIDTLAEIVKAVIGDKGGVRMTGG
                     GFGGCIVALIPEELVPAVQQAVAEQYEAKTGIKETFYVCKPSQGAGQC"
     gene            10434..11474
                     /gene="galM"
                     /locus_tag="JN001_001413"
     CDS             10434..11474
                     /gene="galM"
                     /locus_tag="JN001_001413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose-1-epimerase"
                     /protein_id="HAY9052695.1"
                     /translation="MLNETPALAPDGQPYRLLTLRNNAGMVVTLMDWGATLLSARIPL
                     SDGSVREALLGCASPECYQDQAAFLGASIGRYANRIANSRYTFDGETVTLSPSQGVNQ
                     LHGGPEGFDKRRWQIVNQNDRQVLFALSSDDGDQGFPGNLGATVQYRLTDDNRISITY
                     RATVDKPCPVNMTNHVYFNLDGEQSDVRNHKLQILADEYLPVDEGGIPHDGLKSVAGT
                     SFDFRSAKIIASEFLADDDQRKVKGYDHAFLLQAKGDGKKVAAHVWSADEKLQLKVYT
                     TAPALQFYSGNFLGGTPSRGTEPYADWQGLALESEFLPDSPNHPEWPQPDCFLRPGEE
                     YSSLTEYQFIAE"
     gene            11676..12428
                     /gene="gpmA"
                     /locus_tag="JN001_001414"
     CDS             11676..12428
                     /gene="gpmA"
                     /locus_tag="JN001_001414"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000301556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HAY9052696.1"
                     /translation="MAVTKLVLVRHGESQWNKENRFTGWYDVDLSEKGVSEAKAAGKL
                     LKEEGYSFDFAYTSVLKRAIHTLWNVLDELDQAWLPVEKSWKLNERHYGALQGLNKAE
                     TAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLALTIDR
                     VIPYWNETILPRMKSGERVIIAAHGNSLRALVKYLDNMSEEEILELNIPTGVPLVYEF
                     DENFKPLKRYYLGNADEIAAKAAAVANQGKAK"
     gene            complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JN001_001415"
     CDS             complement(12586..13638)
                     /gene="aroG"
                     /locus_tag="JN001_001415"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001109196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroG"
                     /protein_id="HAY9052697.1"
                     /translation="MNYQNDDLRIKEIKELLPPVALLEKFPATENAANTVAHARKAIH
                     KILKGNDDRLLVVIGPCSIHDPVAAKEYATRLLALREELKDELEIVMRVYFEKPRTTV
                     GWKGLINDPHMDNSFQINDGLRIARKLLLDINDSGLPAAGEFLDMITPQYLADLMSWG
                     AIGARTTESQVHRELASGLSCPVGFKNGTDGTIKVAIDAINAAGAPHCFLSVTKWGHS
                     AIVNTSGNGDCHIILRGGKEPNYSAKHVAEVKEGLNKAGLPAQVMIDFSHANSSKQFK
                     KQMDVCADVCQQIAGGEKAIIGVMVESHLVEGNQSLESGEPLAYGKSITDACIGWEDT
                     DALLRQLANAVKARRG"
     gene            13954..14334
                     /locus_tag="JN001_001416"
     CDS             13954..14334
                     /locus_tag="JN001_001416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052698.1"
                     /translation="MKMTKLATLFLTATLSLASGAALAADSGAQTNNGQANAATDAGQ
                     VAPDARENVAPNNVDNNGVNTGSGGTMLHSDGSSMNNDGMTKDEEHKNTMCKDGRCPD
                     INKKVQTGDGINNDVDTKTDGTTQ"
     gene            14448..15389
                     /gene="zitB"
                     /locus_tag="JN001_001417"
     CDS             14448..15389
                     /gene="zitB"
                     /locus_tag="JN001_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family zinc transporter ZitB"
                     /protein_id="HAY9052699.1"
                     /translation="MAHSHSHTSSHLPEDNNARRLLYAFGVTAGFMLVEVVGGFLSGS
                     LALLADAGHMLTDTAALLFALLAVQFSRRPPTIRHTFGWLRLTTLAAFVNAIALVVIT
                     ILIVWEAIERFRTPRPVEGGMMMAIAVAGLLANILSFWLLHHGSEEKNLNVRAAALHV
                     LGDLLGSVGAIIAALIIIWTGWTPADPILSIVVSLLVLRSAWRLLKDSVNELLEGAPV
                     SLDIAELKRRMCREIPEVRNVHHVHVWMVGEKPVMTLHVQVIPPHAHDALLDQIQHYL
                     MDHYQIEHATIQMEYQPCHGPDCHLNEGVSGHSHHHH"
     gene            complement(15386..16105)
                     /locus_tag="JN001_001418"
     CDS             complement(15386..16105)
                     /locus_tag="JN001_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide riboside transporter PnuC"
                     /protein_id="HAY9052700.1"
                     /translation="MDFFSVQNILVHIPIGAGGYDLSWIEAVGTIAGLLCIGLASLEK
                     ISNYFFGLINVTLFGIIFFQIQLYASLLLQVFFFAANIYGWYAWSRQTSQNEAELKIR
                     WLPLPKALSWLAVCVVSIGLMTVFINPVFAFLTRVAVMIMQALGLQVVMPELQPDAFP
                     FWDSCMMVLSIVAMLLMTRKYVENWLLWVIINVISVVIFALQGVYAMSLEYIILTFIA
                     LNGSRMWINSARERGSCALSH"
     gene            complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JN001_001419"
     CDS             complement(16143..17186)
                     /gene="nadA"
                     /locus_tag="JN001_001419"
                     /EC_number="2.5.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HAY9052701.1"
                     /translation="MSVMFDPDTAIYPFPPKPTPLSIDEKAYYREKIKRLLKERNAVM
                     VAHYYTDPEIQQLAEETGGCISDSLEMARFGAKHPASTLLVAGVRFMGETAKILSPEK
                     TILMPTLQAECSLDLGCPVEEFNAFCDAHPDRTVVVYANTSAAVKARADWVVTSSIAV
                     ELIDHLDSLGEKIIWAPDKHLGRYVQKQTGGDILCWQGACIVHDEFKTQALTRLQEEY
                     PDAAILVHPESPQAIVDMADAVGSTSQLIAAAKTLPHQRLIVATDRGIFYKMQQAVPD
                     KELLEAPTAGEGATCRSCAHCPWMAMNGLQAIAEALEQEGSNHEVHVDERLRERALVP
                     LNRMLDFAATLRG"
     gene            complement(17435..17510)
                     /locus_tag="JN001_001420"
     tRNA            complement(17435..17510)
                     /locus_tag="JN001_001420"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17475..17477),aa:Lys,seq:ttt)
     gene            complement(17657..17732)
                     /locus_tag="JN001_001421"
     tRNA            complement(17657..17732)
                     /locus_tag="JN001_001421"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17697..17699),aa:Lys,seq:ttt)
     gene            complement(17736..17811)
                     /locus_tag="JN001_001422"
     tRNA            complement(17736..17811)
                     /locus_tag="JN001_001422"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17776..17778),aa:Val,seq:tac)
     gene            complement(17863..17938)
                     /locus_tag="JN001_001423"
     tRNA            complement(17863..17938)
                     /locus_tag="JN001_001423"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17903..17905),aa:Lys,seq:ttt)
     gene            complement(17941..18016)
                     /locus_tag="JN001_001424"
     tRNA            complement(17941..18016)
                     /locus_tag="JN001_001424"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(17981..17983),aa:Val,seq:tac)
     gene            complement(18052..18127)
                     /locus_tag="JN001_001425"
     tRNA            complement(18052..18127)
                     /locus_tag="JN001_001425"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(18092..18094),aa:Lys,seq:ttt)
     gene            complement(18292..19083)
                     /gene="cpoB"
                     /locus_tag="JN001_001426"
     CDS             complement(18292..19083)
                     /gene="cpoB"
                     /locus_tag="JN001_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein CpoB"
                     /protein_id="HAY9052702.1"
                     /translation="MSSNFRHQLLSLSLLVGIAAPWAAFAQAPISSVGSGSVEDRVTQ
                     LERISNAHSQLLTQLQQQLSDNQSDIDSLRGQIQENQYQLNQVVERQKQILLQIDSLS
                     SGGAAAQSTSSDQSGAAASTTPTADAGTANAGAPVKSGDANTDYNAAIALVQDKSRQD
                     DAMVAFQNFIKNYPDSTYLPNANYWLGQLNYNKGKKDDAAYYFASVVKNYPKSPKAAD
                     AMFKVGVIMQDKGDTAKAKAVYQQVISKYPGTDGAKQAQKRLNAM"
     gene            complement(19093..19614)
                     /gene="pal"
                     /locus_tag="JN001_001427"
     CDS             complement(19093..19614)
                     /gene="pal"
                     /locus_tag="JN001_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HAY9052703.1"
                     /translation="MQLNKVLKGLMIALPVMAIAACSSNKNASNDGSEGMLGAGTGMD
                     ANGGNGNMSSEEQARLQMQQLQQNNIVYFDLDKYDIRSDFAQMLDAHANFLRSNPSYK
                     VTVEGHADERGTPEYNISLGERRANAVKMYLQGKGVSADQISIVSYGKEKPAVLGHDE
                     AAYSKNRRAVLVY"
     gene            complement(19649..20941)
                     /gene="tolB"
                     /locus_tag="JN001_001428"
     CDS             complement(19649..20941)
                     /gene="tolB"
                     /locus_tag="JN001_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001646851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolB"
                     /protein_id="HAY9052704.1"
                     /translation="MKQALRVAFGFLILWASVLHAEVRIVIDSGVDSGRPIGVVPFQW
                     AGPGAAPEDIGGIVAADLRNSGKFNPLDRARLPQQPGSAQEVQPSAWSALGIDAVVVG
                     QVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK
                     GAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVT
                     FESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA
                     SGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQN
                     QDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTMVIYS
                     SSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL"
     gene            complement(21074..22255)
                     /gene="tolA"
                     /locus_tag="JN001_001429"
     CDS             complement(21074..22255)
                     /gene="tolA"
                     /locus_tag="JN001_001429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HAY9052705.1"
                     /translation="MSKATEQNDKLKRAIIISAVLHVILFAALIWSSFDENIEASAGG
                     GGGSSIDAVMVDSGAVVEQYKRMQSQESSAKRSDEQRKMKEQQAAEELREKQAAEQER
                     LKQLEKERLAAQEQKKQAEEAAKQAELKQKQAEEAAAKAAADAKAKAEADAKAAEEAA
                     KKAAADAKKKAEAEAAKAAAQKKAEAAAAALKKKAEAAEAAAAEARKKAATEAAEKAK
                     AEAEKKAAAEKAAADKKAAADKKAAEKAAAEKAAADKKAAAEKAAAEADDIFGELSSG
                     KNAPKTGGGAKGNNASPAGSGNSKNNGASGADINNYAGQIKSAIESKFYDASSYAGKT
                     CTLRIKLAPDGMLLDIKPEGGDPALCQAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK
                     P"
     gene            complement(22320..22748)
                     /gene="tolR"
                     /locus_tag="JN001_001430"
     CDS             complement(22320..22748)
                     /gene="tolR"
                     /locus_tag="JN001_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin uptake protein TolR"
                     /protein_id="HAY9052706.1"
                     /translation="MARARGRGRRELKSEINIVPLLDVLLVLLLIFMATAPIITQSVE
                     VDLPDATESQAVSSNDNPPVIVEVSGIGQYTVVVEKDRLERLPPEQVVAEVSSRFKAN
                     PKTVFLIGGAKDVPYDEIIKALNLLHSAGVKSVGLMTQPI"
     gene            complement(22752..23444)
                     /gene="tolQ"
                     /locus_tag="JN001_001431"
     CDS             complement(22752..23444)
                     /gene="tolQ"
                     /locus_tag="JN001_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system protein TolQ"
                     /protein_id="HAY9052707.1"
                     /translation="MTDMNILDLFLKASLLVKLIMLILIGFSIASWAIIIQRTRILNA
                     AAREAEAFEDKFWSGIELSRLYQESQGKRDNLTGSEQIFYSGFKEFVRLHRANSHAPE
                     AVVEGASRAMRISMNRELENLETHIPFLGTVGSISPYIGLFGTVWGIMHAFIALGAVK
                     QATLQMVAPGIAEALIATAIGLFAAIPAVMAYNRLNQRVNKLELNYDNFMEEFTAILH
                     RQAFTVSESNKG"
     gene            complement(23441..23845)
                     /gene="ybgC"
                     /locus_tag="JN001_001432"
     CDS             complement(23441..23845)
                     /gene="ybgC"
                     /locus_tag="JN001_001432"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY9052708.1"
                     /translation="MNTTLFRWPARVYYEDTDAGGVVYHASYVAFYERARTEMLRHHH
                     FSQQALMAERVAFVVRKMTVEYYAPARLDDMLEIQTEITSMRGTSLVFTQRIVNAENT
                     LLNEAEVLVVCVDPLKMKPRALPKSIVAEFKQ"
     gene            complement(23995..24288)
                     /gene="ybgE"
                     /locus_tag="JN001_001433"
     CDS             complement(23995..24288)
                     /gene="ybgE"
                     /locus_tag="JN001_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyd operon protein YbgE"
                     /protein_id="HAY9052709.1"
                     /translation="MSKIIATLYAVMDKRPLRALSFVMALLLAGCMFWDPSRFAAKTS
                     ELEIWHGLLLMWAVCAGVIHGVGFRPQKVLWQGIFCPLLADIVLIIGLIFFFF"
     gene            complement(24288..24401)
                     /gene="cydX"
                     /locus_tag="JN001_001434"
     CDS             complement(24288..24401)
                     /gene="cydX"
                     /locus_tag="JN001_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome bd-I oxidase subunit CydX"
                     /protein_id="HAY9052710.1"
                     /translation="MWYFAWILGTLLACSFGVITALALEHVESGKAGQEDI"
     gene            complement(24416..25555)
                     /gene="cydB"
                     /locus_tag="JN001_001435"
     CDS             complement(24416..25555)
                     /gene="cydB"
                     /locus_tag="JN001_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000568269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HAY9052711.1"
                     /translation="MIDYEVLRFIWWLLVGVLLIGFAVTDGFDMGVGMLTRFLGRNDT
                     ERRIMINSIAPHWDGNQVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLASLFFRPV
                     GFDYRSKIEETRWRNMWDWGIFIGSFVPPLVIGVAFGNLLQGVPFNVDEYLRLYYTGN
                     FFQLLNPFGLLAGVVSVGMIITQGATYLQMRTVGELHLRTRATAQVAALVTLVCFALA
                     GVWVMYGIDGYVVKSTMDHYAASNPLNKEVVREAGAWLVNFNNTPILWAIPALGVVLP
                     LLTILTARMDKAAWAFVFSSLTLACIILTAGIAMFPFVMPSSTMMNASLTMWDATSSQ
                     LTLNVMTWVAVVLVPIILLYTAWCYWKMFGRITKEDIERNTHSLY"
     gene            complement(25571..27139)
                     /gene="cydA"
                     /locus_tag="JN001_001436"
     CDS             complement(25571..27139)
                     /gene="cydA"
                     /locus_tag="JN001_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HAY9052712.1"
                     /translation="MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSG
                     KQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLM
                     AFFLESTFVGLFFFGWDRLGKVQHMCVTWLVALGSNLSALWILVANGWMQNPIASDFN
                     FETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAWYMLKGRDFAFAKR
                     SFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPAAFTLFGIPD
                     QEEETNKFAIQIPYALGIIATRSVDTPVIGLKELMVQHEERIRNGMKAYSLLEQLRSG
                     STDQAVRDQFNSMKKDLGYGLLLKRYTPNVADATEAQIQQATKDSIPRVAPLYFAFRI
                     MVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQP
                     WAIGEVLPTAVANSSLTAGDLIFSMVLICGLYTLFLVAELFLMFKFARLGPSSLKTGR
                     YHFEQSSTTTQPAR"
     gene            complement(27987..>29058)
                     /locus_tag="JN001_001437"
     CDS             complement(27987..>29058)
                     /locus_tag="JN001_001437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY9052713.1"
                     /translation="IEESSDDGDEYDYSPAKEEWVITAANAKPQCDIIHEAWQSRAVI
                     RYDMAVPLNLSERSARQSTGRVGVVLVVTLSHNSRRIDVDINLDNQADDHRLRVLVPT
                     PFNTDSVLADTQFGSLTRPVNDSAMNNWQQEGWKEAPVPVWNMLNYVALQEGRNGMAV
                     FSEGLREFEVIGEEKKTFAITLLRGVGLLGKEDLLLRPGRPSGIKMPVPDSQLRGLLS
                     CRLSLLSYTGTPTAAGVAQQARAWLTPVQCYNKIPWDAMKLNKAGFNVPESYSLLKMP
                     PVGCLISALKKAEDRQEVILRLFNPAESATCDATVAFSREVISCSETMMDEHITTEEN
                     QGSNLSGPFLPGQSRTFSYRLA"
BASE COUNT         7344 a         7638 c         7084 g         6992 t
ORIGIN      
        1 acatttttaa aacagctata gcttctggtc ttgccgaaga agatccagct tctgcaacca
       61 ggccattcag aactgaagtg aagcgcagtc gactgttaat tgacgagtat ctgttaatca
      121 ggaaaatagc agacgtccag aacgaatggt tcggcctttg catggatctt gcactggtaa
      181 caggacagcg cgaaggagat ctggcggcta tgagatggga ggatataaga gatggcagac
      241 tatacgtgga acaacaaaaa acaggggcaa aaattcgcat ttctctcccc accacgattt
      301 ccagattgaa tttaacactt accgatgtac tggataactt gaaaaaaata aacggtaaaa
      361 acgaaaagtt actcggaggg aagacagcca ggacaatcgc agcacagttc aggattgccc
      421 gagacacatc cggattgaaa tgggaaggtg acccaccgcc atttcatgaa atccgaagtt
      481 tatccggtcg cctgcactca gcagaaaaag gcagtgattt cactcaggcg ctccttggac
      541 atcgttcatc cagcatgacg gataaatacc gtgacggacg agggagggaa tggaaagaca
      601 tttagaatta atttcgaatg atttcgaaac accacttgta attaattgat tataaaggat
      661 taattcctaa gaggcatttg cttcatgaat gctcctttgc atttagcaac tgactgtaac
      721 agctaaaatt agtcgctttt ggcggtgaat gctgaattaa aacgcagaat tttgtccgat
      781 agtggtatcg gtgtaccatt cgcgcagacg aaaattctta accttaatct ggaatacgcc
      841 atgaccacac gcgtgattgc tctcgactta gacggcacct tattgacccc gaaaaagacc
      901 ctgcttcctt catcgataga agccctggcc cgcgctcgcg aagcaggcta tcaattaatc
      961 atcgtcacag gtcgccatca cgtcgctatt catccttttt atcaggcgct ggcgctggat
     1021 acacctgcta tttgctgtaa tggcacctat ttgtatgatt atcatgcaaa aaccgtgctg
     1081 gaagcggacc caatgcccgt taataaagcc ctgcaactca ttgagatact gaatgaacac
     1141 cacattcacg gtctgatgta tgtggatgat gcaatggtct atgagcaccc gaccgggcat
     1201 gtcattcgca cgtctaactg ggcgcaaacc ctgccgccgg aacagcgtcc gactttcaca
     1261 caagtcgctt ctctggctga aacggcgcaa caagttaacg ccgtatggaa gttcgccctg
     1321 acgcacgatg acatgccgca attgcagcat tttggtaagc atgtcgaaca tgaactggga
     1381 ctggagtgtg aatggtcctg gcacgatcag gttgatattg cacgcggcgg caacagcaaa
     1441 ggtaaacgtt tgacgaaatg ggttgaggcg caaggctggt cgatggaaaa cgtcgtggcg
     1501 ttcggcgata actttaatga tatcagtatg ctggaggccg ctggtacagg cgtggcgatg
     1561 ggcaacgccg atgacgcggt aaaagcgcgc gccaacattg tgattggtga taacaccacc
     1621 gacagcattg cccagttcat ttatagccac ctgatttaat caggcggtta tcgacacact
     1681 tttaatttgc gcgtacagcc acaggcctgg tttgatcgcc agttcatccc tggcccacgg
     1741 gctgatacgc gcccacagcg ttttaccgcc gacttccagc tccacttcca cctgaccgtt
     1801 gtcgtcataa ctattaacaa cttttgcccg caatacgtta cgaatgctgg tttgctgcgg
     1861 cggttgtaaa accagagaaa catcggaagc ctgaatgcgg atacgtagcg cagcttgcag
     1921 cggttcgtcc agcttattga cccacaaatg ctgatcgccc agcgccagcg cggtcatcgc
     1981 gtaatgcgga tgatgctcaa gcaccgtcac tttcagaatg ctactttgtt gctctttcgg
     2041 cagccacgga ttcatcacgc tactacccca gacttcttcc agtgcgccaa aggctttcac
     2101 ctgaccgttt tccagtacca tcactctgtc tgccagatgg aggatctcat ccagcgaatg
     2161 gctgacatac aacatcggga tgttgatttc ccgcgtcaga cgttgcagat aaggcaacag
     2221 ttcgcgttta cgcggaatat ccagtgacgc cagcggttca tccagcaaca gcaattctgg
     2281 tgccgtcagc aaagcccgcc caatcgctac gcgctgtttt tcgcctccgg acaggctgcc
     2341 tggtaaacgg tcaagcaacg gttcaatgcc taaaagcgcc accagcttat cgaactgatc
     2401 gaccatgctt ttcgccatgc cgtagcgcag attgccacgc actttgtaat gcggaaacag
     2461 ccgcgcatcc tgaaaaacat agccaacgcg acgcttttct ggcgtcaggc agataccttt
     2521 ttcggcatca tttagtaccc gaccattgag gacaatcctc cctttttgcg ggcgcgtcag
     2581 tccactgatg gcgttaatca gcgaagtttt tccggcaccg gagacgccaa agatagcagt
     2641 gatgccattg gcgggcagcg tttcattaat agtcaggcaa tggttgccca acgtctggga
     2701 aaaattcagt tccagcatga ttagcgcccc gcccgttcac ggctgattct ggccagccat
     2761 tctgaaatca acagggagat catcgccagc gcaatagaaa taatgcacag tctcgccgcg
     2821 ccactttccc cgccgggggt ctggatcagg gtatacatgg cagagggaat ggttcgcgtt
     2881 tcgccaggaa tgttcgacac aaaggtgatg gttgcaccaa actcaccgag agaacgagca
     2941 aaagccagta ccgtaccaac aataattccc ggtaaggtca gcggtaacgt gatagtaaag
     3001 aaaacgcgcc agcgcccggc acctagtgtt cttgcggcct gttcgagttt gacatcaacc
     3061 ccttccagcg ccagacgaat tgcccgcacc atcagcggaa acgacatgac ggcggcagcg
     3121 agaaccgcgc cgcgccagct aaaggcgaag gtaataccaa accagtcata cagacgttca
     3181 ccgataaatc cgcgccgtcc catcgaaact aataataagt aaccgacgac cacgggcggt
     3241 aacaccagcg gtagatgcag tacgctgtcg agcagagctt tgcccggaaa cgtgcaacgc
     3301 accagtaacc aggcaaaaaa gatcccaaac ggcaggctaa acagcacagc cagggaagaa
     3361 actttcaggc ttaataaaac tgcctgccat tctggatcgg tcagtatcat tacttggttg
     3421 taaatccgta acgtttaaag atttccgctg cctgcggtcc cttcagataa tcataaaatg
     3481 ctttcactgt cgcattgtta tgcccttcca caacagcaac cggatattcc acttttttat
     3541 gtgaatcttc cgggaaggtg gcaaccactt ttaccccttt gctgacaact gcgtcagaac
     3601 cgtaaacaat gcccaacggc gcttcattgc gttcgaccaa cgccagcgcg ccacgaacat
     3661 cttccgccgg agccaatttc ggggagagcg tatcccatgc gcccagtttt tgcagtgctt
     3721 cttttgcata aatgccagca gggacatgtt ccggatcgcc aaccgcgagg cgaccgccat
     3781 tcagcagcga agtccagtta gttgtgctgt cgatgatgaa atctttctgc tcgctggctt
     3841 tcggtgctac aacgaccagg ctattgccga gcagtgtctg gcgcgaagcc gtatcgatcg
     3901 cttttttatc aaccgcataa tccatccatt tctgatcggc agagataaac agatccgcag
     3961 gcgctcccgc ttcaatctga cgggccagag tagatgacga agcgaaagaa gaaaccacat
     4021 ccacgccttt ttctttttta tactgcgtag caatgtcctg cattgcgtta gtcagtgatg
     4081 cggcggcgaa caccgtgatt ttcccttcat ctgccagtgt attgccagca acagcgaaag
     4141 agagtgccgc cccggcaaac aagttcaacc atttacgagc cattggtaac cccttaatgt
     4201 aacgttatat agatgacaat ataacggcta actcagaatt ttcccagcag ttattgctaa
     4261 cctttgtgag gtagataaga aaaaatatcg gctggaaaag caggaagttg agaaaaagaa
     4321 atgcccgact aagtgggcat tcagggaatc aatgattttg tccgggctgg tcttttttac
     4381 caacaccaga aaagatgttg aatacttcac caagaccgta aatcagaccc aggatgatgg
     4441 ccatcacgac aggtaccatg attacggcga ataccagact ttttaataac tctaacatgg
     4501 tcaactccag atatagtcat gagactattc taaccgctaa gcacagaaaa gcactcccct
     4561 tttgtgcggt cagctttgcg tggcgttcgt tttccgtcac aataagactt ttgccaggac
     4621 attgttatgc aggccgaaat ccttctcacc cttaagctcc aacaaaaatt attcgccgac
     4681 ccgcgccgga tttcgctact aaaacacatt gcgctttccg gttccattag ccagggagcg
     4741 aaagatgccg gtatcagcta taaaagcgcc tgggatgcca ttaacgagat gaatcagtta
     4801 agcgagcata ttctggttga gcgcgcaaca ggcggtaaag gtggcggcgg cgcagtactg
     4861 acccgctatg gtcagcgact gattcagctc tatgacttac tggcgcaaat ccagcaaaaa
     4921 gcctttgatg tgttaagtga cgatgacgcc ctgccgctga acagcctgct ggccgcgatc
     4981 tcacgttttt cactgcaaac cagcgcccgt aaccagtggt tcggtaccat caccgcccgc
     5041 gatcatgatg acgttcaaca gcatgttgat gtcttactgg ctgacggaaa aacacgcctg
     5101 aaagtcgcaa ttaccgcaca aagcggcgca cgtctggggc tggatgaagg caaagaagtg
     5161 ttgatattgc taaaagcgcc gtgggtaggc attactcagg acgaagcggt cgcacaaaac
     5221 gccaacaacc aattaccggg tattattagt catattgagc gcggcgcaga gcagtgcgaa
     5281 gtattaatgg cgctacccga cgggcaaaca ctgtgcgcca cagtgccggt aaatgaagcg
     5341 acttctcttc agcaagggca gaatgtcacg gcctacttta atgccgacag cgtgattatc
     5401 gccacgctgt gctaagcgtg ttgacaattt gttatgaaac acgtatccct gtcagtaatc
     5461 gctgcacaaa atgggatata aaatgtcatc gttgcaaatt ttgcaaggca cgtttcgtct
     5521 tagcgacaca aaaacgctgc aattgcctca gctaacgtta aacgcgggtg atagttgggc
     5581 gtttgtcggt tcgaatggaa gcgggaaatc ggccctggcc cgcgcgctgg cgggggaact
     5641 tccgcttttg aaaggtgaac ggcaaagcca gttttcccac atcactcgtc tctccttcga
     5701 gcaattgcaa aaactcgtca gcgacgaatg gcagcggaat aacaccgata tgctcggccc
     5761 tggcgaagat gacaccggac gcactacggc tgagatcatt caggatgaag taaaggatgc
     5821 accgcgttgc atgcaactgg cgcagcagtt cggtattacc gccctcctcg accgacgctt
     5881 taaatacctt tccactggcg agacgcgaaa aatcctgctg tgtcaggcgc tgatgtcgga
     5941 gcctgacttg ttgattcttg atgagccgtt cgatggcctg gatgttgcct cacgtcagca
     6001 gctggctgag cgactcgcct cgttacatca gtccggtatt actctggtac tggtgctcaa
     6061 tcgcttcgat gagatcccgg agtttgtcca gtttgctggc gtgctggcgg attgcacgtt
     6121 agcggaaact ggcgctaaag aggaactgct ccaacaagca ctcgtcgcgc aactggcaca
     6181 tagtgaacag cttgaaggtg tgcaactgcc ggagccggat gaaccttcag cacgtcacgc
     6241 cttacccgcc aacgaaccgc gcattgtgct gaacaatggc gtggtttctt ataacgatcg
     6301 ccccattctt aataacctta gctggcaggt gaatccaggt gaacactggc aaattgtcgg
     6361 gccaaatggt gcaggaaaat cgacgttatt aagcctggtt actggcgatc atccgcaagg
     6421 ttacagcaac gatttgacgc ttttcggacg acgtcgcggc agcggcgaaa ccatctggga
     6481 tatcaaaaag catatcggtt acgtcagcag tagtttgcat ctggattacc gggtcagcac
     6541 taccgtgcgt aatgtgattc tttctggcta ttttgattcg attggcattt atcaggccgt
     6601 ttcggatcgc cagcaaaaac tggtgcagca gtggctggat attctcggca ttgataaacg
     6661 tacggctgac gctccgttcc atagtctttc ctggggacag cagcatctgg cgctgatcgt
     6721 ccgcgcactg gtgaaacatc cgacgttgct tattctcgat gaaccactac aggggcttga
     6781 tccgctcaat cgccagctta tccgccgttt tgttgatgtg ctgattagcg aaggtgaaac
     6841 gcaattgttg tttgtttcgc accacgctga agatgcgcct gcctgtatta cccatcgcct
     6901 tgagttcgtg ccggacggtg gactctatcg ctatgtgctg acaaaaatat attgagtcgg
     6961 tagtgctgac cttgccggag gcggcctaag cgccctctcc ggccaacggt tcgacgcatg
     7021 caggcatgaa accgcttctt ttttcagata aaaagcgcaa tcattcataa accctctgtt
     7081 ttataatcac ttaatcgcgc ataaaaaacg gctaaattct tgtgtaaacg attccactaa
     7141 tttattccat gtcacacttt tcgcatcttt gttatgctat ggttatttca taccataagc
     7201 ctaatggagc gaattatgag agttctgctt accggtggta gcggttacat tggaagtcat
     7261 acctgcgtgc aattactgca aaacggtcat gatgtcatca ttcttgataa cctctgtaac
     7321 agtaagcgca gcgtactgcc tgttatcgag cgtttaggcg gcaaacatcc aacgtttgtt
     7381 gaaggcgata ttcgtaacga agcgttgatg accgagatcc tgcacgatca cgctatcgac
     7441 accgtgatcc acttcgccgg gctgaaagcc gttggcgaat cggtacaaaa accgctggaa
     7501 tattacgaca acaatgtcaa cggtactctg cgcctgatta gcgccatgcg cgccgctaac
     7561 gtcaaaaact ttatttttag ctcctccgcc accgtttatg gcgatcagcc caaaattcca
     7621 tacgttgaaa gcttcccgac cggcacaccg caaagccctt acggcaaaag caagctgatg
     7681 gtggaacaga tcctcaccga tctgcaaaaa gcccagccgg actggagcat tgccctgctg
     7741 cgctacttca acccggttgg cgcgcatccg tcgggcgata tgggcgaaga tccgcaaggc
     7801 attccgaata acctgatgcc atacatcgcc caggttgctg taggccgtcg cgactcgctg
     7861 gcgatttttg gtaacgatta tccgaccgaa gatggtactg gcgtacgcga ttacatccac
     7921 gtaatggatc tggcggacgg tcacgtcgtg gcgatggaaa aactggcgaa caagccaggc
     7981 gtacacatct acaacctcgg cgctggcata ggcagcagcg tgctggacgt ggttaatgcc
     8041 ttcagcaaag cctgcggcaa accggttaac tatcattttg caccgcgtcg cgagggcgac
     8101 cttccggcct actgggcgga cgccagcaaa gccgaccgtg aactgaactg gcgcgtaacg
     8161 cgcacactcg atgaaatggc gcaggacacc tggcactggc agtcacgcca tccacaggga
     8221 tatcccgatt aaggaacgac catgacgcaa tttaatcccg ttgatcatcc acatcgccgc
     8281 tacaacccgc tcaccgggca atggattctg gtttcaccgc accgcgctaa gcgcccctgg
     8341 cagggggcgc aggaaacgcc agccaaacag gtgttacctg cgcacgatcc agattgcttc
     8401 ctctgcgcag gtaatgtgcg ggtgacaggc gataaaaacc acgattacac cgggacttac
     8461 gttttcacta atgactttgc ggccttgatg tctgacacgc cagatgcgcc agaaagcaac
     8521 gatcctttga tgcgttgcca gagcgcgcgc ggtaccagcc gggtgatctg cttttcaccg
     8581 gatcacagta aaacgttgcc agaactgagc gttgcggcat tgacggaaat cgtcaaaacc
     8641 tggcaggagc aaaccgcaga gctgggaaaa acgtacccgt gggtgcaggt ctttgaaaac
     8701 aaaggtgcgg cgatgggctg ctctaacccg catccgcacg gacagatttg ggcaaatagc
     8761 ttcctgccta acgaagctga gcgcgaagac cgcctgcaaa aagaatattt tgccgaacag
     8821 aaatcaccaa tgctggtgga ttatgttcag cgcgagctgg cagacggtag ccgtaccgtt
     8881 gtcgaaaccg aacactggtt agccgttgtg ccttactggg ctgcctggcc gttcgaaacg
     8941 ctactgctgc ccaaagccca cgttttgcgg atcaccgatt tgaccgacgc ccagcgcagc
     9001 gatttggcgc tggcgttgaa aaagctgacc agtcgttatg acaacctctt ccagtgctcc
     9061 ttcccctact ctatgggctg gcacggcgca ccatttaatg gcgaagagaa tcaacactgg
     9121 cagctgcacg cgcactttta tccgcctctg ctgcgctccg ccaccgtacg taaatttatg
     9181 gttggttatg aaatgctggc agagacccag cgagacctga ccgcagaaca ggcagcagag
     9241 cgtttgcgcg cagtcagcga tatccatttt cgcgaatccg gagtgtaaga aatgagtctg
     9301 aaagaaaaaa cacaatctct gtttgccaac gcatttggct accctgccac tcacaccatt
     9361 caggcgcctg gccgcgtgaa tttgattggt gaacacacgg actacaacga cggtttcgtt
     9421 ctgccctgcg cgattgatta tcaaaccgtg atcagctgtg caccacgcga tgaccgtaaa
     9481 gttcgcgtga tggcagccga ttatgaaaat cagctcgacg agttttccct caatgcgccc
     9541 attgtcgcgc atgaaaacta tcaatgggcg aactacgttc gtggcgtggt gaaacatctg
     9601 caactgcgta acaacagctt cggcggtgtg gacatggtga tcagcggcaa tgtgccgcag
     9661 ggtgccgggt taagttcttc cgcttcactg gaagtcgcgg tcggaaccgt attgcagcag
     9721 ctttatcatc tgccgctgga cggcgcacaa atcgcgctta acggtcagga agcagaaaac
     9781 cagtttgttg gctgtaactg cgggatcatg gatcagctaa tttccgcact cggcaagaaa
     9841 gatcatgcct tgctgattga ctgtcgttca ctggggacca aagcagtttc catgccgaaa
     9901 ggtgtggctg tcgtcatcat caacagtaac ttcaaacgta ccctggttgg cagcgaatac
     9961 aacacccgtc gtgaacagtg cgaaaccggt gcgcgtttct tccagcagcc agccctgcgc
    10021 gatgtcacca ttgaagagtt caacgctgtt gcacatgagc tggacccaat cgtggcgaaa
    10081 cgcgtgcggc atatcctgac tgaaaacgcc cgcaccgttg aagctgccag cgcgctggag
    10141 cagggcgacc tgaaacgtat gggcgagttg atggcggagt ctcatgcctc tatgcgcgat
    10201 gatttcgaaa tcaccgtgcc gcaaattgac actctggcag aaatcgtcaa agctgtgatt
    10261 ggcgacaaag gtggcgtacg catgaccggc ggcggatttg gcggctgtat cgtcgcgttg
    10321 atcccggaag agctggtgcc tgccgtacag caagctgtcg ctgaacaata tgaagcaaaa
    10381 acaggtatta aagagacttt ttacgtttgt aaaccatcac aaggagcagg acagtgctga
    10441 acgaaactcc cgcactggca cccgatggtc agccgtaccg actgttaact ttgcgtaaca
    10501 acgcagggat ggtagtcacg ctgatggact ggggtgcgac tttactttca gcccgtattc
    10561 cgctttccga tggcagcgtc cgcgaggcgc tgctcggctg tgccagcccg gaatgctatc
    10621 aggatcaggc cgcgtttctg ggggcctcta ttggtcgtta tgccaaccgc atcgccaata
    10681 gccgttatac ctttgacggt gaaaccgtga ccctttcgcc aagtcagggc gttaaccagc
    10741 tgcacggcgg cccggaaggg ttcgacaaac gtcgctggca gattgtgaac cagaacgatc
    10801 gtcaggtgct gtttgccctg agttcagatg atggcgatca gggcttcccg ggtaatctcg
    10861 gcgcaacggt gcaatatcgt ctgaccgacg ataaccgtat ctccattact tatcgcgcca
    10921 cagttgataa accttgcccg gtgaatatga ctaatcacgt ctatttcaat cttgacggcg
    10981 agcagtctga cgtgcgcaat cacaagttgc agattctggc ggacgaatat ctgccggttg
    11041 atgaaggcgg cattccgcac gacggcctga aatctgtcgc cggaacgtct tttgatttcc
    11101 gcagcgccaa aatcatcgcc agtgagtttc ttgccgacga cgatcagcgc aaagtgaaag
    11161 gttacgatca cgcattcttg ttacaggcca aaggcgatgg caagaaagtg gcggcgcatg
    11221 tctggtcagc agatgaaaaa ttgcagctga aggtctacac caccgctccg gctctgcaat
    11281 tctactccgg caacttcctc ggcggcacac cgtcgcgggg aacagaacct tacgccgact
    11341 ggcaagggct ggcgttggaa agcgagtttc tgccggacag cccgaaccac cctgaatggc
    11401 cgcaaccgga ctgcttcctg cgtcctggcg aagagtattc cagcctgacg gaatatcagt
    11461 ttattgctga gtaatgttaa gccctcgtca tgagggcttt atctcatatt gctcaaatca
    11521 ccagcaaaca ccgacatatt tgcaactcaa tattcacaac aaccttacac tgcgccacta
    11581 ttttcgctat ggttatgcgt aagcattgct gttgcttcgt cgcggcaata taatgagaat
    11641 tattatcatt aaaagatgat ttgaggagta agtatatggc tgtaactaag ctggttctgg
    11701 ttcgtcatgg cgaaagtcag tggaacaaag aaaaccgttt caccggttgg tacgacgtgg
    11761 atctgtctga gaaaggcgta agcgaagcaa aagcagcagg taagctgctg aaagaggaag
    11821 gttacagctt tgactttgct tacacttctg tgctgaaacg cgctatccat accctgtgga
    11881 atgtgctgga cgaactggat caggcatggc tgcccgttga gaaatcctgg aaactgaacg
    11941 aacgtcacta cggtgcgttg cagggtctga acaaagcgga aactgctgaa aagtatggcg
    12001 acgagcaggt gaaacagtgg cgtcgtggtt ttgcagtgac tccgccggaa ctgactaaag
    12061 atgatgagcg ttatccgggt cacgatccgc gttacgcgaa actgagcgag aaagaactgc
    12121 cgctgacgga aagcctggcg ctgaccattg accgcgtgat cccttactgg aatgaaacta
    12181 ttctaccgcg tatgaagagc ggtgagcgcg taatcatcgc cgcacacggt aactccctgc
    12241 gtgcgctggt gaaatatctt gataacatga gcgaagaaga gattcttgag ctgaatatcc
    12301 cgactggcgt gccgctggtg tatgagttcg acgagaattt caaaccgctg aaacgctatt
    12361 atctgggtaa tgctgacgag atcgcagcga aagcagcggc ggttgcaaac cagggtaaag
    12421 cgaagtaaac gtcattcgtt taaaatgaga aagccgactg caagtgagtc ggcttttttg
    12481 ttgctaacaa tggagcacat tgcctgatgc gacgcttcgc gacttatcag gcctgtggtg
    12541 attcatcgga tacgccactc tgacggcgca tccgacaatt aaaccttacc cgcgacgcgc
    12601 ttttactgca ttcgccagtt gacgtaacag agcatcggta tcttcccagc cgatgcaggc
    12661 atcggtgatg ctcttaccgt aggccagcgg ctccccgctc tcgaggctct gattgccttc
    12721 caccagatgg ctttccacca tcacgccaat aatggccttt tcgccaccgg caatctgctg
    12781 gcaaacgtca gcacaaacat ccatctgctt tttgaattgt ttggacgagt tagcatggct
    12841 gaaatcgatc atcacctgtg ctggcaggcc tgctttgttc agcccttctt tcacttcagc
    12901 aacgtgcttc gcgctgtagt taggctcttt accgccgcgc agaatgatat ggcaatcgcc
    12961 gttaccgctg gtattcacaa tcgccgaatg cccccatttc gttacggaca ggaagcagtg
    13021 cggcgcaccg gcggcattaa tggcatcgat agccacttta atcgtaccgt cggtgccatt
    13081 tttgaagccg actggacaag aaagccctga tgccagttcg cggtgcacct gcgattcggt
    13141 ggtacgtgcg ccaattgcgc cccagctcat caggtcagcg agatattgtg gggtgatcat
    13201 atcgagaaac tcacccgccg ctggcagacc gctgtcgtta atatcaagca gcaatttacg
    13261 ggctatacga agaccgtcgt tgatctggaa gctgttatcc atatgcggat cgttaatcag
    13321 ccctttccag cccaccgtgg tacgcggctt ttcaaaatag acgcgcatta cgatttccag
    13381 ctcatctttc agctcttcac gcagcgccag caagcgagtg gcatactctt tagccgcgac
    13441 aggatcatga attgagcacg ggccaatcac caccaacagg cgatcatcat tacctttcag
    13501 gatcttatgg atcgcttttc gggcatgggc aaccgtattc gcggcatttt cagtagcggg
    13561 gaatttttcc agcaatgcga caggaggaag taactctttg atttctttga tgcgtaaatc
    13621 gtcgttctga taattcatgt ctgttccagt gttgccatac ttatcttagt gaatgcaata
    13681 cttccaatct atatcttccg tcagaatgtg taaacggggt tttacattat gaacggatta
    13741 atcctggaat tagcaagaaa aacgccagat tgtcgcgaaa aacgagatct ctcctacaat
    13801 ttctaactgt aactcctttg tttgttaatt atttcaagat tctctgctgc gtttcataaa
    13861 ctggctgaaa tcttaaacca atgccttata ttcacctgca aatgcactgt tggaagaggt
    13921 tatccgacat aacgaccata acaggagcat cctatgaaaa tgacaaaact ggccacatta
    13981 tttctgactg ccactctaag ccttgccagc ggtgccgcac tggctgccga tagcggagcg
    14041 caaactaata acggccaggc aaacgccgca actgatgcgg gccaggtagc ccctgacgcc
    14101 cgtgaaaatg tcgcgccaaa taacgtcgac aataacgggg taaataccgg ttctggcggc
    14161 acaatgctgc attcggatgg ttcttcaatg aacaatgacg gaatgaccaa agatgaagag
    14221 cacaagaaca ccatgtgcaa agatggtcga tgtccggata tcaataaaaa ggtacaaacc
    14281 ggtgatggca tcaataatga tgtcgatacc aaaaccgacg gtaccacgca gtaaccctgc
    14341 aaaatagcca ataatgggag agcggagtct ctccctttta atttttcact tctaaaagca
    14401 gtatgatgtc ataaagttaa gtgagaataa ttaagggatg actcgtcatg gcgcactcac
    14461 actcacacac gtcctcacac ctgccagaag ataataatgc tcgtcgcttg ttgtatgctt
    14521 tcggcgtgac tgccgggttt atgctggtag aagtcgttgg tggttttctt tctggttctc
    14581 tggcattgct ggccgatgcg ggtcatatgt tgaccgatac tgccgccctg cttttcgccc
    14641 tactcgccgt gcaattttca cgtcgtcctc ccaccattcg ccacactttc ggttggctaa
    14701 gactgaccac gctcgcggcg tttgtgaatg ccatcgccct cgtggtaatt accattttga
    14761 ttgtctggga ggcgatagaa cgcttccgca cgccgcgtcc ggtcgagggc ggcatgatga
    14821 tggcaattgc cgtggctggg ttgctggcaa atatactttc tttctggtta cttcatcacg
    14881 gcagcgaaga gaaaaacctc aacgtacgag cagcggcatt gcatgtgctc ggggacctgt
    14941 tgggttcggt tggggctatt attgccgcgt tgattattat ctggaccggc tggacacctg
    15001 ctgaccccat tctctcgata gtggtgtcgc ttctggttct gcgtagcgcg tggcgactgt
    15061 tgaaagatag cgtgaatgaa ttacttgaag gtgcaccggt atcgctggat atcgctgaac
    15121 tgaagcgtcg tatgtgccgg gaaatcccgg aagtccgcaa tgtgcaccat gtacatgtat
    15181 ggatggtagg tgagaagccg gtgatgacgc tgcatgtgca ggtgatcccg ccacacgctc
    15241 acgatgcctt gttggatcag atccaacact acctgatgga tcactatcag attgagcacg
    15301 ccaccattca gatggaatat caaccttgtc atgggccaga ctgccacctg aatgaagggg
    15361 tgtctggcca ttcacatcat caccattaat gggacagcgc gcatgagcct ctttcacgtg
    15421 cgctgttgat ccacatccga ctgccgttga gcgcaataaa ggtcaggatg atgtactcca
    15481 gagacatggc gtaaacgccc tgaagtgcaa aaataacgac gctaatcacg ttaataatca
    15541 cccacaacag ccagttttcc acatacttac gcgtcatcag aagcattgcc acgatagata
    15601 acaccatcat gcatgaatcc cagaacggga aagcgtccgg ttgcagttca ggcatcacaa
    15661 cctgtaatcc taatgcttgc atgatcatga ctgccacgcg ggtcaaaaat gcaaacaccg
    15721 gattgataaa taccgtcatc agaccaatcg aaacaacgca aaccgccaac cagctgagcg
    15781 ccttcggcaa tggtaaccag cgaattttca actccgcctc gttctgactg gtttgtcgcg
    15841 accacgcata ccaaccgtaa atattcgcgg caaagaaaaa cacctgtaat agcaggctgg
    15901 catacagctg aatctgaaag aaaataatgc caaacaaggt gacgttgatc aggccaaaga
    15961 agtagttgct gatcttctcc agactggcaa ggccaataca cagcaacccg gcgatcgtgc
    16021 ctaccgcttc gatccatgag agatcataac cgcctgctcc tattggtata tgtaccagga
    16081 tattctgcac actaaaaaaa tccatctttc ccccaaagcg taacgttacg ccttattatt
    16141 cgttatccac gtagtgtagc cgcaaaatcc agcatacgat tgagcggcac cagcgccctc
    16201 tctcgcagcc tttcatcaac atgaacctcg tgattgcttc cttcctgttc taatgcctct
    16261 gcgatggcct gaaggccatt catggccatc cacggacaat gcgcgcagct gcggcaggtt
    16321 gcaccctcac ctgcggttgg tgcttccagt aactctttat ctggcaccgc ctgctgcatt
    16381 ttgtagaaaa taccccgatc ggttgccaca ataagcctct gatgtggcaa tgttttcgca
    16441 gcagcgatca gttgactggt ggaaccgacc gcatccgcca tatcgacaat agcttgtggt
    16501 gattctggat gcaccagtat ggcagcatcc gggtattctt cttgcaagcg ggttaacgcc
    16561 tgagtcttaa attcatcatg cacaatacag gcaccctgcc agcatagaat gtctccaccc
    16621 gtctgttttt gcacgtaacg ccccagatgt ttgtcgggtg cccagatgat tttttcaccc
    16681 aaactatcaa gatgatcaat aagttcgacg gcaatgcttg aagttaccac ccaatctgcg
    16741 cgcgctttta ccgcagcaga agtgttggcg tagacgacga cagtacgatc gggatgggca
    16801 tcgcaaaatg cgttaaattc ttcaacaggg cagccgagat ccagtgaaca ttcagcctga
    16861 agtgtcggca tcagaattgt tttttccgga ctgagaattt tggcggtttc tcccataaat
    16921 ctcaccccag cgactaacaa agtagaagcg ggatgctttg caccgaagcg cgccatttcc
    16981 agagaatcag aaatacagcc accggtttct tctgccagtt gttgaatttc gggatcggta
    17041 tagtagtggg caaccatcac cgcattacgt tcttttagca gacgttttat cttctcgcgg
    17101 taatacgctt tttcatcaat gcttaacggc gtcggcttcg gggggaaagg ataaatcgcc
    17161 gtgtctggat caaacattac gctcatctta ccatctcgtt ttacaggctt aacgttaaaa
    17221 ccgacattag cgtaatattc gctgttatcg gtgtaatttg ttttatatgc taaacaagat
    17281 agtcgaatgg tggggaaaag tcactcgaat tacgcctaat tccaccgacg tagagttgct
    17341 tgcacagtaa gctctgacga tgtcatcagg tttacaaagt gaaattgagg atgcctgaat
    17401 agcaaaaaag cgcctttagg gcgctttttt acattggtgg gtcgtgcagg attcgaacct
    17461 gcgaccaatt gattaaaagt caactgctct accaactgag ctaacgaccc atacgggtgt
    17521 tacctgaaag atttctactc ggggccaatc tttaagattg gtgtgccgtg caggatgact
    17581 cgcttcgctt gccctacggg ccgttgctgg cgcaacgtta tccttcacgc ttaacatctg
    17641 agtttgatgt taaaattggt gggtcgtgca ggattcgaac ctgcgaccaa ttgattaaaa
    17701 gtcaactgct ctaccaactg agctaacgac ccgagtggtg ggtgatgacg ggatcgaacc
    17761 gccgaccccc tccttgtaag ggaggtgctc tcccagctga gctaatcacc cgataatgcg
    17821 ctggatacta caaactactt ccaccgaacc catcgtaatt agtggtgggt cgtgcaggat
    17881 tcgaacctgc gaccaattga ttaaaagtca actgctctac cgactgagct aacgacccgg
    17941 tggtgggtga tgacgggatc gaaccgccga ccccctcctt gtaagggagg tgctctccca
    18001 gctgagccaa tcacccaata ctacgctgga tactacaact aactatgtta gtggtgggtc
    18061 gtgcaggatt cgaacctgcg accaattgat taaaagtcaa ctgctctacc aactgagcta
    18121 acgacccact ttttcgttgc tttcggtttg tttgatatcc cgtggcaacg gcggcatata
    18181 ttactgattt cagacttgag cgcaacaaaa atttcgatgc agatcactca actgcttatg
    18241 attcgcacga cacgaccaga aataatgcaa cttctggtcg tgtgttatgc attacatcgc
    18301 gttcagacgt ttttgtgcct gtttagcgcc atcagtacca gggtatttac tgataacctg
    18361 ctggtatacg gctttcgctt ttgcggtgtc acctttgtcc tgcatgatga cgccgacttt
    18421 aaacatcgca tcagcagcct ttggtgactt cggatagttt ttcactaccg aagcaaaata
    18481 gtacgccgca tcatcttttt tacccttgtt gtagtttaac tgacccagcc aataattggc
    18541 gtttggcagg taagttgaat cagggtaatt tttgatgaaa ttctgaaatg ccaccattgc
    18601 gtcatcctgg cgggatttat cctgcaccag cgcaatagct gcattgtaat ccgtgtttgc
    18661 atcgccgctt ttcaccggcg cgccagcatt cgcagtacca gcatcagctg tcggcgtcgt
    18721 tgatgccgcc gcaccgcttt gatcgctgct ggttgattgc gccgctgcac caccgctgct
    18781 gaggctgtcg atctgcaaca ggatctgctt ttgccgctcc acgacctgat tcagttgata
    18841 ctgattttcc tgaatctgac cacgcaggga atcaatatcg gattgattat cagaaagttg
    18901 ttgctggagt tgggttaaaa gctggctgtg agcattagaa atacgctcaa gttgagtgac
    18961 gcggtcttcg accgagcctg agccgacact actgattggt gcctgagcaa aagcggccca
    19021 gggggccgct ataccaacca gtaacgacag actcaatagt tgatgtctga agttactgct
    19081 catgcaattc tcttagtaaa ccagtaccgc acgacggttt ttggagtatg ccgcttcgtc
    19141 atgacccagt actgcaggtt tttctttacc gtaagaaacg atggagatct ggtctgcaga
    19201 aacgccttta ccctgcaggt acatcttaac ggcgttcgca cgacgttcac ccagggagat
    19261 gttgtattcc ggagtaccac gttcgtccgc gtgaccttct acggtgactt tgtaagacgg
    19321 gttgctacgc aggaagtttg catgtgcatc cagcatttga gcgaagtcag aacggatatc
    19381 gtacttgtcc agatcgaagt aaacgatgtt gttctgctgc agctgttgca tttgcagacg
    19441 agcctgctct tcggaagaca tgttgccgtt gccgccgttc gcatccatac cagtgccggc
    19501 acccagcatg ccttcgctgc cgtcattgct ggcgttcttg ttggaagaac atgccgcaat
    19561 tgccataaca ggcagagcaa tcatcagccc tttcagcact ttgttcagtt gcatttcaat
    19621 gattccttta ctattcaatt aattattatc acagatacgg cgaccaggca gggaatttga
    19681 cctgtccatc agttgccgga agacgcgctt tgaaacgccc atctgtagaa accaaattca
    19741 gcacggatcc catcccctga gaagagctgt agattaccat agtgccatta ggtgccagac
    19801 ttggcgtttc atccaggaac gtggacgaca gaacttgtac gcctcccgtt gccagatctt
    19861 gtttggcaat gtgctgctgc ccaccattgg agctgaccat taccataaat ttaccgtcgc
    19921 tgctgacatc cgcatcctgg ttctgcgaac cttcccaggt aatacgttgt ggcgcaccgc
    19981 cgttgatatt cactttataa acctgcggac gaccggcctg gtcagaagta aatgccaggt
    20041 tctggctatc cgggaaccag gtcggttcgg tattgttact gcgaccatca gtcacctggc
    20101 ggatctgacc agaagccaaa tccattacgt acaggttcag actaccggtt ttcgacaagg
    20161 cgaatgccag tttgctgccg tctggcgaga atgcaggtgc accgttgtga cgcgggaatg
    20221 aagccacctg acgtacagcg ccatttgcca gcgtctgaat aaccagcgcg gaacgaccgc
    20281 tttcgaaggt cacataagcc agtttagaac cgtctggtga ccacgccgga gacatcagcg
    20341 gctgcggtga acggtgaacg acaaactggt tgtaaccgtc atagtcagat acgcgcagtt
    20401 catacgggaa ctgaccgccg ttggtctgaa caacgtaggc aatacgggta cggaacgcac
    20461 ctttaatgcc ggtcagtttt tcaaacactt catcactggc ggtatgacca gcataacgca
    20521 gccactgctt gttcactttg tacgagttct gagcaagtac agtacccggt gcgccgccag
    20581 tgtcaacaag ttgataagca acattgtaag aaccatccgg attcggagtg acctgaccga
    20641 caactacagc gtcaatgccc agtgcggacc atgcagatgg ttgtacttcc tgcgcactac
    20701 ccggctgctg tggcagacga gcgcgatcta acggattaaa tttaccgctg ttacgcaagt
    20761 cagcagcaac gatgccgcca atatcttcag gtgccgcacc aggccccgcc cactggaaag
    20821 gaacaacacc aataggacga ccggaatcta caccgctgtc gatcacaatg cggacttcag
    20881 catgcagaac tgatgcccac agtatgagaa aaccaaatgc tactcgtaat gcctgcttca
    20941 tcatatctcc cttatctgga ccgatggccc acgataattt agcagaatgt taacaaacta
    21001 aaatacacaa aactaccaga accccgtggc aaccggtgcc tgatgttgac cgtccgaaca
    21061 gtcaacatcg cgattacggt ttgaagtcca atggcgcgtt tttgaacact tcatatactg
    21121 cctggcttgg tggtttcggg atcttcgcaa gtttagctgc tgccaacgca gcctgacaaa
    21181 gtgcgggatc gccaccttca ggtttgatat ccagtaacat accatcgggt gccagtttta
    21241 tgcgcagcgt acaggttttg cctgcatagg acgatgcgtc atagaactta ctttcgatag
    21301 cagatttaat ctgcccggca tagttattga tatcggcccc tgatgcgcca ttgtttttag
    21361 aattaccact cccggcaggc gaagcattgt tccctttcgc ccctcccccc gttttcggtg
    21421 cattcttacc agagcttagc tcaccgaaaa tatcatctgc ctctgcggcg gctttttctg
    21481 ccgctgcttt cttatcagct gctgcctttt cagcagccgc tttttctgct gcttttttgt
    21541 cggctgcagc tttcttatca gctgcagcct tttcagcagc cgctttcttc tcagcttctg
    21601 ctttggcttt ttcagcagct tcagttgccg ctttctttct tgcttcagct gcagctgctt
    21661 ctgccgcttc cgctttcttc ttcagtgccg cagcggctgc ctcggctttt ttctgcgctg
    21721 cggctttggc ggcttctgct tctgcttttt tctttgcgtc tgcagccgct ttcttcgctg
    21781 cttcttccgc agctttagca tctgcttcgg ccttcgcttt agcatctgcc gccgctttcg
    21841 ctgccgcctc ttcagcttgc ttctgcttta actcggcctg ttttgcggct tcttcagcct
    21901 gctttttctg ctcctgagcc gctaaccgct ctttctcaag ttgcttcagg cgttcctgtt
    21961 cagccgcttg tttctcacgc agttcttcag cagcctgctg ttccttcatc ttgcgctgtt
    22021 catcagaacg cttcgcgctt gattcctggc tttgcatgcg tttgtactgc tcaactaccg
    22081 cacctgaatc aaccatgaca gcgtcgatgg acgaaccacc gccgcctccg gctgaagctt
    22141 ctatattctc atcgaacgaa ctccagatca gcgccgcaaa taagatgaca tgcagcactg
    22201 ctgaaataat tatcgcccgc ttgagcttgt cgttttgttc ggttgccttt gacactctcg
    22261 gtttccaaaa actgttcgcc tgttacccgc tctctttcaa gcaagggaaa cgcagatgtt
    22321 tagataggct gcgtcattaa accaaccgat ttcacacccg cactatgtaa caagttcagt
    22381 gctttaatta tttcatcgta aggcacatct tttgcgccac cgatcagaaa gaccgttttc
    22441 gggttggcct tgaagcggct ggacacttcc gccaccacct gctctggtgg taaacgctcc
    22501 aggcgatctt tctcaaccac cacggtgtac tgaccaatac cagacacttc aacaatcact
    22561 ggcggattat cgttactgct caccgcctgt gattcagtag cgtctggcag atcgacctcc
    22621 acgctctggg tgatgatggg cgctgtcgcc atgaagatca gcaacagcac cagcagtacg
    22681 tccagcaacg gtacaatgtt gatttcggac ttaagttcgc gacgacctcg tccacgcgct
    22741 ctggccatga cttacccctt attgctctcg ctaacggtaa acgcctggcg gtgcagaatc
    22801 gcggtaaact cttccataaa gttgtcgtaa ttcagttcca gtttgtttac gcgctggttg
    22861 aggcggttgt aggccataac tgccgggata gcggcaaaca gaccaattgc agtcgcaatc
    22921 aacgcttctg cgataccggg cgcaaccatt tgcagtgttg cttgttttac cgccccgagg
    22981 gcgataaagg catgcatgat cccccagacc gtaccaaaca gaccaatata cgggctgatg
    23041 gagccaaccg taccgaggaa cggaatgtgc gtttccagat tttcaagttc acggttcatg
    23101 gagatacgca tagcacgcga cgccccttcc actacggctt ccggcgcatg gctattggca
    23161 cgatgcaggc gcacaaactc tttgaacccg ctgtaaaata tttgttccga accagtcaga
    23221 ttatcccgtt tcccctgact ctcttgatag aggcgagaga gttcgattcc agaccagaat
    23281 ttatcttcaa acgcttcggc ttcgcgcgcc gctgcgttaa gaatacgggt ccgctggata
    23341 ataatggccc aggatgcgat tgaaaaacca atcaaaatca acatgataag tttaaccaga
    23401 aggctagcct tcaggaacaa atcaaggata ttcatgtcag tcactgctta aactccgcga
    23461 caatagactt gggaagcgca cgaggcttca ttttgagtgg gtcaacgcaa acaaccagaa
    23521 cctctgcttc attcagcaaa gtattctcgg cgttgacaat acgttgcgtg aaaaccaaag
    23581 aggtgccacg cattgatgtt atttcagtct gtatttcgag catatcgtcg agccgcgcag
    23641 gtgcgtaata ttccaccgtc attttacgta ccacaaaggc aacgcgttca gccatcagcg
    23701 cctgctgact gaagtgatga tgacgcagca tctctgtgcg tgctctttca taaaaagcga
    23761 cgtaactggc gtggtacacc acaccaccgg catcggtatc ttcatagtag acgcgagccg
    23821 gccatcgaaa cagcgttgta ttcactttac atcccggtaa tgcaacaaaa gttagagctt
    23881 ttaaacgctg ctactatacg cgcgcgattg aggtttggga atgagggcaa gttaagggag
    23941 cgtaaaaatt tatgggcctg gagcggccca taatttttta aagagaattc tgatttaaaa
    24001 gaagaagaaa atcagcccga taatgagaac aatatcggca agcaatgggc aaaaaatccc
    24061 ttgccaaaga accttctgcg gacgaaagcc cacgccgtga atcacaccag cacagacggc
    24121 ccacatcagc aataaaccat gccagatttc cagttcactg gtcttcgcgg caaaacgaga
    24181 tgggtcccaa aacatacatc ctgctaacag aagcgccatc acgaaggaaa gcgcccgcag
    24241 ggggcgcttg tccattaccg catacaaggt cgcgataatc ttactcatca gatgtcttct
    24301 tgaccggctt tgcctgattc gacgtgttca agcgccagcg cggtgattac cccaaacgaa
    24361 caggcaagaa gcgttcccag aatccatgcg aaataccaca tttttagctc cttacttagt
    24421 acagagagtg ggtgttacgt tcaatatctt ctttggtgat acgaccgaac attttccagt
    24481 aacaccaggc ggtgtagagc agaatgatcg gtaccagaac caccgcaacc caggtcatga
    24541 cgttaagcgt cagctggctg gaagttgcat cccacattgt cagacttgcg ttcatcatgg
    24601 tgctggacgg catcacaaac gggaacattg cgataccggc tgtcaggatg atgcaggcca
    24661 gcgtcaggga ggagaacaca aacgcccacg cggctttatc catacgtgca gtcaggatgg
    24721 tcagcagcgg cagaaccaca cccagtgccg gaatagccca cagaattggc gtgttgttga
    24781 agttaaccag ccatgcgcca gcttcacgaa ccacttcttt attcagtggg ttagaggctg
    24841 cgtaatggtc cattgtcgat ttcacgacat aaccatcgat accgtacatc acccatacgc
    24901 cagccagtgc gaaacagacc agtgtcacca gcgcagccac ctgagccgtt gcacgggtac
    24961 gcaggtgcag ttcgcccacg gtacgcattt gcagataggt tgcgccctga gtaatgatca
    25021 tccctacgct caccacgcct gccagcaggc cgaacgggtt aagcaactgg aagaagttac
    25081 cggtgtagta cagacgcaga tattcatcaa cgttgaacgg tacgccctgc aacaggttac
    25141 cgaacgcaac accaattacc agcggcggaa cgaagctacc aatgaagatg ccccagtccc
    25201 acatgttacg ccagcgggtt tcttcaatct tggagcggta gtcaaaaccg accggacgga
    25261 agaacaaaga cgccagcacg aggatcatcg ccacatagaa gccggagaac gcagcggcat
    25321 agaccatcgg ccaggcagca aagagtgcgc cgcccgcggt gatcagccaa acctggttac
    25381 cgtcccagtg tggtgcaatg gagttaatca taattcgacg ctcggtgtcg ttacgaccga
    25441 ggaaacgggt gagcatgccc acccccatgt cgaaaccgtc agtgactgca aaaccaatca
    25501 gcagaacgcc aaccagcagc caccagataa aacgcaatac ttcataatcg atcatttgac
    25561 gactcctgtc ttagcgtgcc ggctgagtag tcgtggaaga ctgctcaaag tgatagcgac
    25621 cggttttcag gctgcttggg ccgaggcgtg caaatttgaa cattaagaac aattctgcca
    25681 ccaggaacag ggtatacagg ccgcaaatca gcaccattga gaagatgaga tcgcctgcgg
    25741 tcagtgacga attcgccaca gctgtcggca gcacttcacc gatagcccac ggttggcggc
    25801 catattcagc cacgaaccag cccgcttcta cagcaatcca cggcagcgga ataccgtaca
    25861 gcgcggcgcg cagcagccat tttttctcgc caatgcggtt gcggatgaca ctccagaaag
    25921 agagcgcgat gattgccagc agcaggaagc cacacgccac cataatacgg aacgcgaagt
    25981 acagcggcgc tacacgcgga atggagtctt tagttgcctg ttgaatctgc gcttcagtcg
    26041 catcagccac gtttggcgta tagcgtttca gcagcagacc gtaaccgagg tctttcttca
    26101 tgctattgaa ctggtcacga accgcctggt cggtagaacc agaacgcagt tgttcgagca
    26161 gagagtacgc cttcatcccg ttacgaatgc gttcttcatg ctgcaccatc agctctttca
    26221 ggccgataac cggggtatcc acggaacgcg ttgcaatgat gcccagtgcg taagggatct
    26281 gaatcgcaaa tttgttcgtc tcctcttcct gatcaggaat gccgaacaga gtaaaggcag
    26341 caggcgcagg ttgcgtttcc cactcggctt caatagcagc cagtttggtt ttctgcacgt
    26401 cgcccatttc gtagccggat tcatcaccca gaacaataac agacagaaca gcagccatac
    26461 cgaagctggc agcgatagca aaggagcgtt tagcgaaggc gaagtcacga cctttcagca
    26521 tataccatgc gctgataccg aggatgaaca tcgcgccagt cacataacca gacgctacag
    26581 tgtgaacgaa tttcacctga gcaaccgggt taagcaccag ctcggagaag ctcaccatct
    26641 ccatacgcat agtttcaaag ttgaaatcgg acgcgattgg gttttgcatc cagccgttcg
    26701 caaccagaat ccacagtgcg gacaggtttg aaccgagcgc caccagccag gtgacacaca
    26761 tatgctgaac tttacccaga cgatcccaac cgaagaagaa cagacctaca aaggtggatt
    26821 cgaggaagaa ggccatcaga ccttcgattg ccagcggcgc accgaagata tcccctacat
    26881 agtgggaata gtaagaccag ttagtcccga actggaactc catggtcaga ccggtagcca
    26941 cacccagagc gaagttgata ccaaacaact tgccccagaa cttggtcata tctttataaa
    27001 tctgtttgcc ggagaggacg tagaccgttt ccataatggc cagcaggaac gccataccga
    27061 gcgtcagtgg cacaaaaagg aagtggtaca tcgcggtcaa ggcaaactgt aagcgcgaca
    27121 gttcgactat atctaacatc atgactcctt gctcatcgca tgaagactcc gagagtgaac
    27181 cccgttagaa agggtcacac gcatgcccca atagaaattt gtttgaacac tttcatcata
    27241 ccatgtgaat gcacacaaaa acggcgtaaa gaaaggttgc aaacatgtta ataaaaactc
    27301 aaattgatcc cacgtatata ttacgccgca aaatccttac aataaacagg tttttgttga
    27361 agcaaatttg catttttcga cggtgatcaa tttatagcta aattaccgcc tttcagccaa
    27421 tttgatcgag aacaatttat ctctttttga tgcccatttc caagacttat acattgataa
    27481 atatcaattc ctacaaatta tgttaatcat gtttcaataa ggtaacttta gtgacattta
    27541 tgtttaaaat gtgtgagtta taaggctgaa attagtttcg gttggcaatt aaagataaaa
    27601 agagacgaag caaaaacagc acggttgacc ttaattcttt ttttggtcac tggctaatac
    27661 gacgcagagt ttcaggatta ctaataaagg cataaatcca cccccgccga tattaacatt
    27721 taattaactt ataattatat tataattaac tcacccaggg ttattatttt gttaaaaata
    27781 aagccacata tacgtggctt gagagtgaag ataaacgcaa aattacctga tgcgctacgc
    27841 ttgccagtgt ctacatcatc tctgcaatat attgaatttg cctgcttttg tagaccgaat
    27901 aaagcgttca tgccgtatcc ggcatgaaca aagcgccctt tgtcaacaat ctggccgcgc
    27961 atatgtggct tcggtttgat tgctattcag gcaagccggt aactgaacgt ccgtgactgg
    28021 ccgggtaaaa aaggccccga tagatttgaa ccttgatttt cctcggtggt aatgtgttca
    28081 tccatcatcg tttctgagca agaaatcacc tcgcgactga aagcaacagt cgcatcacag
    28141 gttgctgatt cagccggatt aaacagccgt aaaatcactt cttgtcggtc ttcagctttc
    28201 ttaagtgcgc ttatcaggca tcccactggg ggcattttca acaaactata actttccggc
    28261 acgttgaatc cggctttgtt gagcttcatc gcatcccatg ggattttgtt gtaacactgt
    28321 actggagtca gccatgctcg cgcctgctga gctacaccag cggcggttgg cgtaccggta
    28381 taactcaata aacttaggcg acaagaaagc agaccacgta gttgtgagtc cgggactggc
    28441 attttaattc ccgaaggccg cccaggcctt aaaagcagat cttctttgcc cagtaagccc
    28501 acgccacgca gcaacgtaat ggcaaaggtt ttcttctctt caccgatgac ttcaaattca
    28561 cgtaaccctt cgctaaagac agccatgccg ttacgccctt cctgtaaggc aacatagttg
    28621 agcatattcc ataccggaac cggcgcttct ttccagcctt cttgctgcca gttgttcatt
    28681 gcactgtcgt tcacggggcg cgttagcgaa ccaaactgcg tatctgccag aacactgtcg
    28741 gtgttaaaag gtgtagggac caggacacga aggcgatgat cgtcagcctg gttatcaagg
    28801 ttgatatcca catcaatacg cctgctgtta tgactaagag tgacaaccaa caccacccct
    28861 actctgccag tggattgccg ggcgctgcgt tctgacaaat tgagcggcac tgccatgtca
    28921 tagcggataa cagccctgct ctgccaggct tcatgaataa tatcgcattg cggtttcgcg
    28981 ttcgctgcgg taattaccca ctcttctttt gcgggtgaat agtcatattc atcaccatca
    29041 tcagagcttt cttcaatt
//
LOCUS       DADMJE010000036        28224 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.037, whole genome shotgun sequence.
ACCESSION   DADMJE010000036 DADMJE010000000
VERSION     DADMJE010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 28224)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28224)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28224
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.037"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..856)
                     /locus_tag="JN001_001438"
     CDS             complement(<1..856)
                     /locus_tag="JN001_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000239477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY9052714.1"
                     /translation="MVKKPQQGTIFAAAQRSDSYFVKCINMLSLYEKIKIRLIILFLL
                     AALSFIGLFFIINYQLVSERAVKRADSRFELIQKNVGYFFKDIERSALTLKDSLYLLK
                     NTEEIQRAVILKMEMMPFLDSVGLVLDDNKYYLFSRRANDKIVVYHQEQVNGPLVDES
                     GRVIFADFNPSKRPWSVASDDSNNSWNPAYNCFDRPGKKCISFTLRINGKDHDLLAVD
                     KIHVDLNWRYLNEYLDQISANDEVLFLKQGHEIIAKNQLAREKLIIYNSEGNYNIIDS
                     VDTEYIAKT"
     gene            complement(956..1867)
                     /gene="gsiD"
                     /locus_tag="JN001_001439"
     CDS             complement(956..1867)
                     /gene="gsiD"
                     /locus_tag="JN001_001439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001236035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiD"
                     /protein_id="HAY9052715.1"
                     /translation="MRLFNWRRQAVLNAMPLVKPDQVRTPWHEFWRRFRRQHMAMTAA
                     LFVILLIVVAIFARWIAPYDAENYFDYDNLNNGPSLQHWFGVDSLGRDIFSRVLVGAQ
                     ISLAAGVFAVFIGAAIGTLLGLLAGYYEGWWDRLIMRICDVLFAFPGILLAIAVVAVL
                     GSGIANVIIAVAIFSIPAFARLVRGNTLVLKQQTFIESARSIGASDMTILLRHILPGT
                     VSSIVVFFTMRIGTSIISAASLSFLGLGAQPPTPEWGAMLNEARADMVIAPHVAVFPA
                     LAIFLTVLAFNLLGDGLRDALDPKIKG"
     gene            complement(1870..2790)
                     /gene="gsiC"
                     /locus_tag="JN001_001440"
     CDS             complement(1870..2790)
                     /gene="gsiC"
                     /locus_tag="JN001_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter permease GsiC"
                     /protein_id="HAY9052716.1"
                     /translation="MLNYVIKRLLGLIPTLFIVSVLVFLFVHMLPGDPARLIAGPEAD
                     AQVIELVRQQLGLDQPLYHQFWHYISNAVQGDFGLSMVSRRPVADEIASRFMPTLWLT
                     ITSMVWAVIFGMAAGIIAAVWRNRWPDRLSMTIAVSGISFPAFALGMLLIQVFSVELG
                     WLPTVGADSWQHYILSSLTLGAAVAAVMARFTRASFVDVLSEDYMRTARAKGVSETWV
                     VLKHGLRNAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA
                     EILLFSLEFILINLVVDVLYAAINPAIRYK"
     gene            complement(2808..4346)
                     /gene="gsiB"
                     /locus_tag="JN001_001441"
     CDS             complement(2808..4346)
                     /gene="gsiB"
                     /locus_tag="JN001_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter substrate-binding
                     protein GsiB"
                     /protein_id="HAY9052717.1"
                     /translation="MARAVHRSGLVALGIATALMASCAFAAKDVVVAVGSNFTTLDPY
                     DANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQDGT
                     DFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILVH
                     PATAMISPAALEKYGKEIGFHPVGTGPYELDTWNQTDFVKVKKFAGYWQPGLPKLDSI
                     TWRPVADNNTRAAMLQTGEAQFAFPIPYEQAALLEKNKNIELMASPSIMQRYISMNVT
                     QKPFDNPKVREALNYAINRPALVKVAFAGYATPATGVVPPSIAYAQSYKPWPYDPVKA
                     RELLKEAGYPNGFSTTLWSSHNHSTAQKVLQFTQQQLAQVGIKAQVTAMDAGQRAAEV
                     EGKGQKESGVRMFYTGWSASTGEADWALSPLFASQNWPPTLFNTAFYSNKQVDDFLAQ
                     ALKTNDPAEKTRLYKAAQDIIWQESPWIPLVVEKLVSAHSKNLTGFWIMPDTGFSFED
                     ADLQ"
     gene            complement(4366..6237)
                     /gene="gsiA"
                     /locus_tag="JN001_001442"
     CDS             complement(4366..6237)
                     /gene="gsiA"
                     /locus_tag="JN001_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione ABC transporter ATP-binding protein
                     GsiA"
                     /protein_id="HAY9052718.1"
                     /translation="MPHSDELDAGNVLAVENLNIAFMQDQQKIAAVRNLSFSLQRGET
                     LAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLQRRSREVIELSEQSAAQMRHVR
                     GADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQNASREEAMVEAKRMLDQVRIPEAQT
                     ILSRYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEM
                     SMGVIFITHDMGVVAEIADRVLVMYQGEAVETGTVEQIFHAPQHPYTRALLAAVPQLG
                     AMKGLDYPRRFPLISLEHPAKQEPPIEQKTVVDGEPVLRVRNLVTRFPLRSGLLNRVT
                     REVHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLS
                     PGKLQALRRDIQFIFQDPYASLDPRQTIGDSIIEPLCVHGLLPGKDAAARVAWLLERV
                     GLLPEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLD
                     LQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLLAA
                     VPVAEPSRQRPQRVLLSDDLPSNIHLRGEEVAAVSLQCVGPGHYVAQPQSEYAFMRR"
     gene            complement(6224..7189)
                     /gene="iaaA"
                     /locus_tag="JN001_001443"
     CDS             complement(6224..7189)
                     /gene="iaaA"
                     /locus_tag="JN001_001443"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY9052719.1"
                     /translation="MGKAVIAIHGGAGAISRAQMSLQQELRYIEALSAIVETGQKMLE
                     AGESALDVVTEAVRLLEECPLFNAGIGAVFTRDETHELDACVMDGNTLKAGAVAGVSH
                     LRNPVLAARLVMEQSPHVMMIGEGAENFAFARGMERVSPAIFSTPLRYEQLLAARKEG
                     ATVLDHSGAPLDEKQKMGTVGAVALDLDGNLAAATSTGGMTNKLPGRVGDSPLVGAGC
                     YANNASVAVSCTGTGEVFIRALAAYDIAALMDYGGLSLAEACERVVMEKLPALGGSGG
                     LIAIGHEGNVALPFNTEGMYRAWGYAGDTPTTGIYREKGDTVATQ"
     gene            7393..8628
                     /gene="moeA"
                     /locus_tag="JN001_001444"
     CDS             7393..8628
                     /gene="moeA"
                     /locus_tag="JN001_001444"
                     /EC_number="2.10.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HAY9052720.1"
                     /translation="MEFTTGLMSLDTALNEMLSRVTPLTAQETLPLVQCFGRILASDV
                     VSPLDVPGFDNSAMDGYAVRLADIASGQPLPVAGKSFAGQPYHGEWPAGTCIRIMTGA
                     PVPEGCEAVVMQEQTEQTDNGVRFTAEVRSGQNIRRRGEDISAGAVVFPAGTRLTTAE
                     LPVIASLGIAEVPVIRKVRVALFSTGDELQLPGQPLGDGQIYDTNRLAVHLMLEQLGC
                     EVINLGIIRDDPHALRAAFIEADSQADVVISSGGVSVGEADYTKTILEELGEIAFWKL
                     AIKPGKPFAFGKLSNSWFCGLPGNPVSATLTFYQLVQPLLAKLSGNTASGLPARQRVR
                     TASRLKKTPGRLDFQRGVLQRNADGELEVTTTGHQGSHIFSSFSLGNCFIVLERDRGN
                     VDVGEWVEVEPFNALFGGL"
     gene            8628..9377
                     /gene="moeB"
                     /locus_tag="JN001_001445"
     CDS             8628..9377
                     /gene="moeB"
                     /locus_tag="JN001_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HAY9052721.1"
                     /translation="MAELSDQEMLRYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGC
                     AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHNDATVGQPKVESARDALTRINPHIA
                     ITPVNALLDDAELAALIAEYDLVLDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQ
                     ITVFTYQDGEPCYRCLSRLFGENALTCVEAGVMAPLIGVIGSLQAMEAIKLLAGYGKP
                     ASGKIVMYDAMTCQFREMKLMRNPGCEVCGQ"
     gene            complement(9453..10115)
                     /gene="fsa"
                     /locus_tag="JN001_001446"
     CDS             complement(9453..10115)
                     /gene="fsa"
                     /locus_tag="JN001_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415346.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HAY9052722.1"
                     /translation="MELYLDTSDVVAVKALSRIFPLAGVTTNPSIIAAGKKPLDVVLP
                     QLHEAMGGQGRLFAQVMATTAEGMVNDARKLRSIIADIVVKVPVTAEGLAAIKMLKAE
                     GIPTLGTAVYGAAQGLLSALAGAEYVAPYVNRIDAQGGSGIQTVTDLHQLLKMHAPQA
                     KVLAASFKNPRQALDCLLAGCESITLPLDVAQQMISYPAVDAAVAKFEQDWLGAFGRT
                     SI"
     gene            10246..11145
                     /locus_tag="JN001_001447"
     CDS             10246..11145
                     /locus_tag="JN001_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415345.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl-radical enzyme activating protein"
                     /protein_id="HAY9052723.1"
                     /translation="MIFNIQRYSTHDGPGIRTVVFLKGCSLGCRWCQNPESRARTQDL
                     LYDARLCLEGCELCAKAAPEVIERALNGLLIHREKLTPEHLTALTDCCPTQALTVCGE
                     VKSVEEIMATVLRDKPFYDRSGGGLTLSGGEPFMQPEIATALLQACHEAGIHTAVETC
                     LHVPWKYITPSLPYIDLFLADLKHIADAPFKQWTDGNAAKVLDNLKKLAAAGKKIIIR
                     VPLIQGFNADETSVKAITDFAADELHVGEIHFLPYHTLGINKYHLLNLPYDAPEKPLD
                     APDLLDFAQQYACQKGLTATLRG"
     gene            11151..13583
                     /locus_tag="JN001_001448"
     CDS             11151..13583
                     /locus_tag="JN001_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycyl radical protein"
                     /protein_id="HAY9052724.1"
                     /translation="MTTLKLDTLSDRIKAHKNALVHIVKPPVCTERAQHYTEMYQQHL
                     DKPIPVRRALALAHHLANRTIWIKHDELIIGNQASEVRAAPIFPEYTVSWIEKEIDDL
                     ADRPGAGFAVSEENKRVLHEVCPWWRGQTVQDRCYGMFTDEQKGLLATGIIKAEGNMT
                     SGDAHLAVNFPLLLEKGLDGLREKVAERRSRINLTVLEDLHGEQFLKAIDIVLVAVSE
                     HIERFAALAREMAATETRESRRDELLAIAENCDLIAHQPPQTFWQALQLCYFIQLILQ
                     IESNGHSVSFGRMDQYLYPYYRRDVELNQTLDREHAIELLHSCWLKLLEVNKIRSGSH
                     SKASAGSPLYQNVTIGGQTLVDGQPMDAVNPLSYAILESCGRLRSTQPNLSVRYHAGM
                     SNDFLDACVQVIRCGFGMPAFNNDEIVIPEFIKLGIEPQDAYDYAAIGCIETAVGGKW
                     GYRCTGMSFINFARVMLAALEGGRDATSGNVFLPQEKALSAGNFNNFDEVMDAWDTQI
                     RYYTRKSIEIEYVVDTMLEENVHDILCSALVDDCIERAKSIKQGGAKYDWVSGLQVGI
                     ANLGNSLAAVKKLVFEQGAIGQQQLAAALADDFDGLTHEQLRQRLINGAPKYGNDDDT
                     VDTLLARAYQTYIDELKQYHNPRYGRGPVGGNYYAGTSSISANVPFGAQTMATPDGRK
                     AHTPLAEGASPASGTDHLGPTAVIGSVGKLPTAAILGGVLLNQKLNPATLENESDKQK
                     LMILLRTFFEVHKGWHIQYNIVSRETLLEAKKHPDQYRDLVVRVAGYSAFFTALSPDA
                     QDDIIARTEHML"
     gene            13729..14544
                     /gene="ybiV"
                     /locus_tag="JN001_001449"
     CDS             13729..14544
                     /gene="ybiV"
                     /locus_tag="JN001_001449"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase YbiV"
                     /protein_id="HAY9052725.1"
                     /translation="MSVKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKRGIEFVVAS
                     GNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL
                     NFVACGLQSAYVSENAPEAFVALMAKHYHRLKAVKDYQEIDDVLFKFSLNLPDEQIPL
                     VIDKLHIAFDGIMKPVTSGFGFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGN
                     DAEMLKMARYSFAMGNAAENIKQIARYATDDNNHEGALNVIQAVLDNTSPFNS"
     gene            14696..15961
                     /locus_tag="JN001_001450"
     CDS             14696..15961
                     /locus_tag="JN001_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1479 domain-containing protein"
                     /protein_id="HAY9052726.1"
                     /translation="MASTFTSDTLPADHKAAIRQMKHALRAQLGDVQQIFNQLSDDIA
                     TRVAEINALKAQGDAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGHFPREQALGW
                     DQSMLDYLDRNRFDEVYKGPGDNFFGTLSTSRPEIYPIYWSQTQMQARQSEEMANAQS
                     FLNRLWTFESDGKQWFNPDVSVIYPDRIRRRPPGTTSKGLGAHTDSGALERWLLPAYQ
                     RVFANVFNGNLAQYDPWHAAHRTEVEEYTVDNTTKCSVFRTFQGWTALSDMLPGQGLL
                     HVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAG
                     DSVWWHCDVIHSVAPVENQQGWGNVMYIPAAPMCEKNLAYAHKVKAALEKGASPGDFP
                     HEDYETNWEGRFTLADLNIHGKRALGMDV"
     gene            complement(16202..17794)
                     /locus_tag="JN001_001451"
     CDS             complement(16202..17794)
                     /locus_tag="JN001_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATPase"
                     /protein_id="HAY9052727.1"
                     /translation="MLVSSNVTMQFGSKPLFENISVKFGGGNRYGLIGANGSGKSTFM
                     KILGGDLEPTLGNVSLDPNERIGKLRQDQFAFEEFTVLDTVIMGHKELWEVKQERDRI
                     YALPEMSEEDGYKVADLEVKYGEMDGYSAEARAGELLLGVGIPVEQHYGPMSEVAPGW
                     KLRVLLAQALFADPDILLLDEPTNNLDIDTIRWLEQVLNERDSTMIIISHDRHFLNMV
                     CTHMADLDYGELRVYPGNYDEYMTAATQARERLLADNAKKKAQIAELQSFVSRFSANA
                     SKSRQATSRARQIDKIKLEEVKASSRQNPFIRFEQDKKLFRNALEVEGLTKGFDNGPL
                     FKNLNLLLEVGEKLAVLGTNGVGKSTLMKTLVGDLQPDSGTVKWSENARIGYYAQDHE
                     YEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFG
                     KLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEI
                     TPERVIDFSGNYEDYLRSKGIE"
     gene            18013..18933
                     /gene="ldtB"
                     /locus_tag="JN001_001452"
     CDS             18013..18933
                     /gene="ldtB"
                     /locus_tag="JN001_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY9052728.1"
                     /translation="MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVIT
                     IPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIV
                     INSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAE
                     YRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDI
                     KFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKS
                     VQTVTGQPDVDQVVLDEAIKNRSGMPVRLN"
     gene            complement(18992..20110)
                     /locus_tag="JN001_001453"
     CDS             complement(18992..20110)
                     /locus_tag="JN001_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anion transporter"
                     /protein_id="HAY9052729.1"
                     /translation="MSLPFLRTLQGDRFFQLLILVGIGLSFFVPFAPKSWPAAIDWHT
                     IITLSGLMLLTKGVELSGYFDVLGRKMVRRFATERRLAMFMVLAAALLSTFLTNDVAL
                     FIVVPLTITLKRLCEIPVNRLIIFEALAVNAGSLLTPIGNPQNILIWGRSGLSFAGFI
                     AQMAPLAGAMMLTLLLLCWCCFPGKVLQYHTGVQTPEWKPRLVWSCLGLYIVFLTALE
                     FKQELWGLVIVAAGFALLARRVVLSVDWTLLLVFMAMFIDVHLLTQLPALQGVLGNVS
                     HLSEPGLWLTAIGLSQVISNVPSTILLLNYVPPSLLLAWAVNVGGFGLLPGSLASLIA
                     LRMANDRRIWWRFHLYSIPMLLWAALVGYVLLVILPAN"
     gene            complement(20107..20574)
                     /gene="mntR"
                     /locus_tag="JN001_001454"
     CDS             complement(20107..20574)
                     /gene="mntR"
                     /locus_tag="JN001_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HAY9052730.1"
                     /translation="MSRRAGTPTAKKVTQLVNVEEHVEGFRQVREAHRRELIDDYVEL
                     ISDLIREVGEARQVDMAARLGVSQPTVAKMLKRLATMGLIEMIPWRGVFLTAEGEKLA
                     QESRERHQIVENFLLVLGVSPEIARRDAEGMEHHVSEETLDAFRLFTQKHGTK"
     gene            20760..20888
                     /gene="mntS"
                     /locus_tag="JN001_001455"
     CDS             20760..20888
                     /gene="mntS"
                     /locus_tag="JN001_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganase accumulation protein MntS"
                     /protein_id="HAY9052731.1"
                     /translation="MNEFKRCMRVFSHSPFKVRLILLSMLCDMVNNKPQQDKPSDK"
     gene            21160..22743
                     /locus_tag="JN001_001456"
     CDS             21160..22743
                     /locus_tag="JN001_001456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase"
                     /protein_id="HAY9052732.1"
                     /translation="MNLTLKESLVTRSRVFSPWTAFYFLQSLLINLGLGYPFSLLYTA
                     AFTAILLLLWRTLPRVQKVLVGVSSLVAACYFPFAQAYGAPNFNTLLALHSTNMEEST
                     EILTIFPWYSYLVGLFIFALGVIAIRRKKENEKARWNTFDSLCLVFSVATFFVAPVQN
                     LAWGGVFKLKDTGYPVFRFAKDVIVNNNEVIEEQERMAKLSGMKDTWTVTAVKPKYQT
                     YVVVIGESARRDALGAFGGHWDNTPFASSVNGLIFADYIAASGSTQKSLGLTLNRVVD
                     GKPQFQDNFVTLANRAGFQTWWFSNQGQIGEYDTAIASIAKRADEVYFLKEGNFEADK
                     NTKDEALLDMTAQVLAQEHSQPQLIVLHLMGSHPQACDRTQGKYETFVQSKETSCYLY
                     TMTQTDDLLRKLYDQLRNSGSSFSLVYFSDHGLAFKERGKDVQYLAHDDKYQQNFQVP
                     FMVISSDDKAHRVIKARRSANDFLGFFSQWTGIKAKEINIKYPFISEKKAGPIYITNF
                     QLQKVDYNHLGTDIFDPKP"
     gene            complement(22792..23307)
                     /gene="ompX"
                     /locus_tag="JN001_001457"
     CDS             complement(22792..23307)
                     /gene="ompX"
                     /locus_tag="JN001_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpX"
                     /protein_id="HAY9052733.1"
                     /translation="MKKIACLSALAAVLAFTAGTSVAATSTVTGGYAQSDAQGQMNKM
                     GGFNLKYRYEEDNSPLGVIGSFTYTEKSRTASSGDYNKNQYYGITAGPAYRINDWASI
                     YGVVGVGYGKFQTTEYPTYKHDTSDYGFSYGAGLQFNPMENVALDFSYEQSRIRSVDV
                     GTWIAGVGYRF"
     gene            complement(23360..23425)
                     /locus_tag="JN001_001458"
     CDS             complement(23360..23425)
                     /locus_tag="JN001_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052734.1"
                     /translation="METFCYMKWPVRHHKSRRVSH"
     gene            23660..24547
                     /gene="rhtA"
                     /locus_tag="JN001_001459"
     CDS             23660..24547
                     /gene="rhtA"
                     /locus_tag="JN001_001459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/homoserine exporter RhtA"
                     /protein_id="HAY9052735.1"
                     /translation="MPGSLRKMPVWLPIVILLVAMASIQGGASLAKSLFPLVGAPGVT
                     ALRLALGTLILIAFFKPWRLRFAKEQRLPLLFYGVSLGGMNYLFYLSIQTVPLGIAVA
                     LEFTGPLAVALFSSRRPVDFVWVVLAVLGLWFLLPLGQDVSHVDLTGCALALGAGACW
                     AIYILSGQRAGAEHGPATVAIGSLIAALIFVPIGALQAGEALWHWSVIPLGLAVAILS
                     TALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTPIQLLALGAIIAAS
                     MGSTLTVRKESKIKELDIN"
     gene            24846..25349
                     /gene="dps"
                     /locus_tag="JN001_001460"
                     /gene_synonym="pexB"
     CDS             24846..25349
                     /gene="dps"
                     /locus_tag="JN001_001460"
                     /gene_synonym="pexB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001730644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA starvation/stationary phase protection
                     protein Dps"
                     /protein_id="HAY9052736.1"
                     /translation="MSTAKLVKSKATNLLYTRNDVSDSEKKATVELLNRQVIQFIDLS
                     LITKQAHWNMRGANFIAVHEMLDGFRTALIDHLDTMAERAVQLGGVALGTTQVINSKT
                     PLKSYPLDIHNVQDHLKELADRYAIVANDVRKAIGEAKDDDTADILTAASRDLDKFLW
                     FIESNIE"
     gene            25753..26499
                     /gene="glnH"
                     /locus_tag="JN001_001461"
     CDS             25753..26499
                     /gene="glnH"
                     /locus_tag="JN001_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter substrate-binding
                     protein GlnH"
                     /protein_id="HAY9052737.1"
                     /translation="MKSVLKVSLAALTLVFAVSSHAADKKLVVATDTAFVPFEFKQGD
                     KYVGFDVDLWAAIAKELKLDYELKPMDFSGIIPALQTKNVDLALAGITITDERKKAID
                     FSDGYYKSGLLVMVKANNNDVKSVKDLDGKVVAVKSGTGSVDYAKANIKTKDLRQFPN
                     IDNAYMELGTNRADAVLHDTPNILYFIKTAGNGQFKAVGDSLEAQQYGIAFPKGSDEL
                     RDKVNGALKTLRENGTYNEIYKKWFGTEPK"
     gene            26638..27297
                     /gene="glnP"
                     /locus_tag="JN001_001462"
     CDS             26638..27297
                     /gene="glnP"
                     /locus_tag="JN001_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015367581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter permease GlnP"
                     /protein_id="HAY9052738.1"
                     /translation="MQFDWSAIWPAIPLLIEGAKMTLWISVLGLAGGLVIGLLAGFAR
                     TFGGWIANHVALVFIEVIRGTPIVVQVMFIYFALPMAFNDLRIDPFTAAVVTIMINSG
                     AYIAEITRGAVLSIHKGFREAGLALGLSRWETIRYVILPLALRRMLPPLGNQWIISIK
                     DTSLFIVIGVAELTRQGQEIIAGNFRALEIWSAVAVFYLIITLVLSFILRRLERRMKI
                     L"
     gene            27294..28016
                     /gene="glnQ"
                     /locus_tag="JN001_001463"
     CDS             27294..28016
                     /gene="glnQ"
                     /locus_tag="JN001_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017491583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine ABC transporter ATP-binding protein
                     GlnQ"
                     /protein_id="HAY9052739.1"
                     /translation="MIEFKNVSKHFGPTQVLHNIDLNIAQGEVVVIIGPSGSGKSTLL
                     RCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHLTALENVMFGP
                     LRVRGANKEEAEKLARELLAKVGLAERAHHYPSELSGGQQQRVAIARALAVKPKMMLF
                     DEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDG
                     NPQVLIKNPPSQRLQEFLQHVS"
BASE COUNT         6979 a         7540 c         6972 g         6733 t
ORIGIN      
        1 atgtctttgc aatatactcc gtatcgacag aatcaataat attataatta ccttcgctat
       61 tataaataat cagtttttca cgagcgagtt gattcttggc aatgatctca tgaccttgtt
      121 tcaaaaatag aacttcatca ttagcgctga tttgatcaag atactcgttc aaataccgcc
      181 agtttaaatc gacatgaatt ttatctaccg ctaacaaatc gtgatctttg ccgttgatac
      241 gtagcgtaaa agagatacat tttttacccg gacgatcaaa gcaattgtat gccggattcc
      301 agctgttgtt agagtcatct gaagccaccg accacggtcg tttcgatggg ttaaaatcgg
      361 caaaaataac ccgccctgac tcgtcgacaa gcggtccatt tacttgttcc tgatgataaa
      421 caacgatttt atcattcgcc ctccgtgaaa agagataata tttattatca tcaagtacca
      481 gtcccaccga gtctaaaaat ggcatcattt ccattttcag aatcacggcg cgttgaatct
      541 cctctgtatt ttttaataaa tacagtgagt cctttaatgt cagggccgaa cgttcaatat
      601 ctttaaagaa atagccaacg tttttctgaa taagttcaaa gcggctatcg gcacgtttta
      661 ccgcgcgttc cgataccagt tgatagttaa tgatgaaaaa aagaccaata aatgacagtg
      721 ctgccaataa aaataaaatt atcagcctta tctttatctt ttcgtataaa ctcagcatgt
      781 taatacattt aacaaaataa ctatctgaac gctgtgccgc tgcaaaaata gtcccttgct
      841 gcggcttttt aaccaaatta cccgattcta caaaatcagc agaaagttac aacacttgct
      901 tagggcaata atttcctgtg aggtgattac cctttcaagc aatattcaaa cgtaactatc
      961 ctttaatttt cggatccagc gcatcgcgta aaccatcgcc caacaaattg aacgccagta
     1021 cggtcagaaa aatagccagg gccggaaaaa cagcgacatg cggcgcgata accatatccg
     1081 ctcgtgcctc attgagcatt gctccccact ctggtgtcgg cggctgcgca ccgaggccga
     1141 gaaatgacag gctggcggca gagataatcg aggtgccaat gcgcatggtg aaaaacacca
     1201 cgatagacga gacggtccca ggcaagatat gacgcaataa aatggtcata tcgctggcac
     1261 caatactgcg tgctgactca ataaaggttt gctgtttcaa caccagcgtg ttgccgcgca
     1321 ccagtcgggc aaacgcgggg atggaaaaaa tggcgactgc gataatcacg ttagcaatgc
     1381 cgcttcccaa caccgcaaca acagcgatcg ccagtaaaat acccgggaag gcaaacagca
     1441 catcgcaaat gcgcatgatc agccgatccc accagccttc ataatatcca gccaacaagc
     1501 ccagcaacgt cccgatcgcc gcaccgataa acacggcaaa cacgcccgcc gccagcgaga
     1561 tttgcgcacc aaccaggaca cggctgaaaa tgtcgcgccc cagtgaatcg acgccaaacc
     1621 agtgctgcaa agaaggtccg ttattcagat tgtcataatc aaaataattt tcggcgtcat
     1681 agggagcgat ccagcgtgca aaaatggcca ccacaatcaa taaaataacg aataatgcgg
     1741 cggtcatcgc catatgctga cggcgaaatc gtcgccagaa ttcatgccac ggtgtacgca
     1801 cctggtcagg tttgaccagt ggcatggcgt ttaacaccgc ctgacgtcgc cagttaaata
     1861 gtcgcatcct tacttgtacc tgatagccgg gttaatggcg gcgtaaagca catccaccac
     1921 taagttgata agaataaatt ccagcgagaa aagcagaatt tccgcctgaa tcaccgggta
     1981 atcgcgcatt tctacggagt caacgagtaa gcgtccaagt ccgggccagt tgaaaacttt
     2041 ctccaccacg atagaaccac cgagcaaaaa gccaaactgt aagcccatca tggtcactac
     2101 cgggatcatc gcgttacgta gcccgtgttt gaggacaacc caggtttcgc tcaccccttt
     2161 cgccctcgcg gtacgcatat aatcttcgct taaaacatcg acaaacgacg cgcgggtaaa
     2221 gcgcgccatc acggctgcca ctgccgcgcc gagcgtcagg gaggataaaa tgtagtgctg
     2281 ccaactgtct gctcccacgg taggcagcca gcccagttca acggagaata cctgaattaa
     2341 aagcatcccc agcgcaaatg ccggaaacga gatccccgac accgcaatgg tcatactcaa
     2401 tcgatccggc caacgattac gccagacggc ggcgataatt cccgccgcca taccaaatat
     2461 caccgcccag accatactgg ttatggtcag ccacagcgtt ggcataaagc ggctggcaat
     2521 ctcatcggca accggacgac gcgacaccat cgacaggcca aaatccccct gcacagcatt
     2581 gctgatatag tgccagaact ggtgatacag cggctgatcc aaccccagct gctgacgcac
     2641 cagttctata acctgcgcat cagcttcggg cccggcaatc aatcgcgccg gatcgccggg
     2701 cagcatatgc acaaataaaa acaccagcac cgagacgata aacagcgtcg gaatcaaccc
     2761 cagtaagcgt ttgataacgt aattaagcat tccactccct gcgttgctta ttgcaaatcc
     2821 gcgtcttcaa agctgaagcc ggtgtctggc atgatccaaa aaccggtcag gtttttactg
     2881 tgtgccgaca ccagtttttc taccaccagc gggatccacg gcgactcttg ccagatgata
     2941 tcctgcgccg ccttatacaa gcgggtcttt tccgccggat cattagtttt cagtgcctga
     3001 gccaggaagt cgtccacctg tttattgctg taaaatgcgg tattaaacag cgtcggtggc
     3061 cagttttgcg aggcgaacag tggcgatagc gcccagtccg cttcgccggt tgaagccgac
     3121 cagccagtgt agaacatccg cacgccgctc tctttttgcc ctttaccttc aacttctgcc
     3181 gcccgctgtc cggcatccat cgcggtcacc tgggctttaa tcccgacctg cgctaactgc
     3241 tgctgggtaa attgcagcac tttctgcgcg gtgctgtggt tatgtgacga ccacagcgtg
     3301 gtactgaaac cgttgggata tcccgcctct ttcagtaatt cgcgcgcttt cactggatcg
     3361 taaggccacg gtttataact ttgcgcgtag gcgatacttg gcggtaccac accagtagct
     3421 ggcgttgcat agcccgcaaa ggcaactttc accagcgccg gacggttaat ggcgtaattc
     3481 agcgcctcac ggaccttcgg gttatcgaac ggcttttgcg tcacgttcat actgatataa
     3541 cgctgcataa ttgacggact ggccatcaac tcgatatttt tgtttttctc cagcagtgcg
     3601 gcctgctcgt agggaatggg gaaagcaaac tgcgcttcac cggtttgcag cattgccgcg
     3661 cgggtgttgt tatccgccac cggacgccag gttatgctgt ccagtttggg caatcctggc
     3721 tgccagtaac ccgcgaattt tttcaccttc acaaaatcgg tctgattcca ggtatccagt
     3781 tcatacggtc cggttcccac cggatgaaaa ccaatctcct tgccatattt ttccagcgct
     3841 gccggtgaaa tcatcgcggt cgccggatgg acaagaatat taataaacgc tgagaacggc
     3901 tgtttgaggg taatctttac cgttgtcgga tcgatcgcct ccgttttggc aatattctta
     3961 tacaggttat agcgtttaag atgattcgcc ggatcgctgg cccggtccag attcgctttc
     4021 accgccgcgg cgttgaaatc ggtgccatcc tggaatttaa ttccttcccg caatttcacg
     4081 gtgtaagtaa tgccgtcatc ggaaacggta taactctccg ccagcacgtt tttcagtttc
     4141 atctctttat ccagaccgaa cagcccctgg taaaacgatt tcgctacggc ctgagataac
     4201 gtgtcattcg cgtcatacgg atcgagcgtg gtgaaattcg atcctaccgc caccaccaca
     4261 tctttggcag cgaatgcaca agatgccatc aacgctgtcg caatgcccag cgccactaac
     4321 ccactacggt gtacagctct tgccatttta ttctccgcct gaatgttatc tacgcatgaa
     4381 tgcgtattct gattgtggtt gtgcgacgta atgccccggc ccgacgcatt gcaacgagac
     4441 ggctgccacc tcttcgccac gcagatgaat attgctggga agatcgtccg acagcagtac
     4501 acgctgcggt cgttgtcggg acggttcagc gaccggaact gccgccagta atttacgcgt
     4561 ataaggatgc tgcgggtttt cgaagaccgc gcgccgtgga ccaatttcaa caatttgccc
     4621 gagatacatc accgccacac gatgactaat ccgctctacc acggccatat cgtgggagat
     4681 aaacagatac gcaatgccga aatcacgctg gagatcgagc aacaagttga taatctgccc
     4741 gcgaatagaa acatccagcg ccgaaacggc ttcgtcggca atgatcactt ttggattcaa
     4801 tgccaacgcg cgagcaatgc agatgcgctg gcgctgaccg ccggaaaact catgcgggta
     4861 acgccaggca tgttcaggta acaggcccac gcgctccagc aaccacgcaa cgcgtgcagc
     4921 cgcgtcttta cctggcaata aaccgtgtac acacagcggt tcgataatcg aatcaccgat
     4981 ggtctgacgt gggtccagcg aagcgtaagg gtcctgaaaa ataaactgaa tatcccggcg
     5041 caatgcctga agtttgccag gtgacaaggt atcgattcgc tgaccgttaa agataatttc
     5101 gccgccctgc gattcgacca ggcgcagcaa cgcccgcccg gtagtggatt taccgctgcc
     5161 agactcgccc accagcgata gcgtttcgcc aggccagaga tcaaaactga ctttctcaac
     5221 ggcatgcact tcccgcgtta cgcgattcaa caaaccgctg cgcaaaggga aacgggtgac
     5281 aagattacgc actcgtaaaa caggttcgcc atccaccacc gttttctgct cgatgggggg
     5341 ttcctgtttc gctggatgtt caagcgatat caatgggaaa cgtcggggat aatctaaccc
     5401 tttcatcgca ccaagttgcg gaacagcagc taacagcgca cgggtgtaag gatgttgcgg
     5461 tgcatgaaaa atctgttcga cggtacccgt ttccaccgcc tcgccctgat acatcaccag
     5521 tacccgatcg gctatctctg ccaccacgcc catatcgtgc gtgataaaga taacacccat
     5581 cgacatctct ttttgcaata ctttgattaa ttgcaggatc tgcgcctgaa tagtgacatc
     5641 cagcgcggtg gttggctcat cggcaatcag caccgccggg cggcatgaca gcgccatcgc
     5701 aatcatcact cgctggcgca tcccgccaga gagttgatgc ggataacgtg aaagaatggt
     5761 ttgtgcctca ggaatgcgta cctgatccag catccgcttc gcctcgacca tcgcttcttc
     5821 acgactggcg ttctgatgca gacgaattga ttcggcaatc tgttcaccca cagtaaatac
     5881 cgggttcagc gatgtcatcg gctcctgaaa tatcatcgcc atatccgcac cgcgaacatg
     5941 gcgcatttgt gcagcgctct gctcgctaag ttcaatcact tcgcgactgc gccgctgcaa
     6001 cagcatttta tcgcactgta ctaaaccgcc cgcctgttcc aacaggcgca tcaatgccaa
     6061 cgcagtcact gacttaccgg agccggattc gccaacaatt gccagcgtct caccgcgttg
     6121 cagactaaaa gagagattgc ggaccgcagc tattttctgc tggtcctgca taaaggcaat
     6181 attcagattt tcaaccgcca gcacattacc ggcatcaagt tcatcactgt gtggcaacgg
     6241 tgtccccttt ttcacggtag ataccggtgg ttggcgtatc gcctgcgtag ccccaggcgc
     6301 gatacattcc ttcggtgtta aacggtagcg cgacattccc ttcatggccg atagcgatta
     6361 agccaccgct accgccaagc gcagggagtt tttccattac tacccgctcg caggcttccg
     6421 cgagacttaa tccgccgtaa tccattaacg cggcgatgtc atatgccgcc agcgcgcgga
     6481 tgaagacttc gcccgtgccg gtacaagaaa ccgccacact ggcgttattg gcgtagcatc
     6541 cggcacccac taagggacta tcgccaactc gtccgggtaa tttattggtc attccgcctg
     6601 tggacgtggc tgccgccaaa ttgccgtcta aatccaacgc cacggccccc acggtgccca
     6661 ttttctgttt ttcatccagt ggcgcaccgc tatggtcgag gacggttgcc ccttccttgc
     6721 gcgctgccag tagttgttca taacgcaaag gcgtggagaa aatcgccggc gagacgcgct
     6781 ccatgccacg agcaaacgca aaattttctg ccccttcgcc aatcatcatc acatgcgggc
     6841 tttgctccat caccagccgg gcggcaagaa ccggattacg cagatgacta acgcccgcca
     6901 ccgcaccggc tttcagggtg ttaccatcca tcacacaggc gtccagttca tgggtttcat
     6961 cacgcgtaaa gacagcgcca attccggcgt taaacagtgg acactcttcc agcagacgca
     7021 ccgcttccgt caccacatcc agcgcacttt cgcccgcttc cagcattttc tgcccggttt
     7081 caacaatggc agacaacgcc tcaatgtagc gtaattcctg ttgcagactc atctgcgcgc
     7141 ggctaattgc acctgcgcca ccatgaattg caatgactgc tttgcccata gtattcgtcc
     7201 attaagggtg gctcgccact tttgctataa atatcagaat ttttatgaat tactcattca
     7261 atttttgaat atagaaagat ggatatggca tgtaaaggca ggagccaacg ctacgcccga
     7321 ggtggcatac agtctgtggc gtttttctga cataataggc aaattcgatt ttgcctccgc
     7381 aggagtgttt tcatggaatt taccaccgga ttgatgtcgc tcgacaccgc gcttaatgag
     7441 atgctttctc gcgtcacccc actgaccgcc caggaaacgc tgccactggt acagtgtttt
     7501 ggtcgtattc tggcgagcga tgtcgtttcg ccgcttgatg ttccggggtt tgataactcc
     7561 gcaatggacg gctacgcggt gcgtttagcc gatattgcct ccgggcaacc gctgcccgtt
     7621 gccggtaaat cctttgccgg tcagccgtat catggtgaat ggcctgcggg cacctgcatt
     7681 cgtattatga ccggtgcgcc ggtgccggaa ggctgcgaag cggtggtgat gcaggagcag
     7741 actgaacaaa cggacaatgg cgtgcgtttt actgctgaag tgcgtagcgg gcaaaatatt
     7801 cgccgtcgcg gtgaagatat ctctgcaggt gcggttgttt tcccggcggg aactcgcctg
     7861 actaccgcag agctgccagt aattgcttca ctggggattg ccgaagttcc ggtgattcgt
     7921 aaagtgcgtg tagcgctttt ttctaccggt gatgaactcc agttgcccgg tcagccgctg
     7981 ggtgacggcc aaatctacga caccaaccgt ctcgccgtac acctgatgtt agaacagctg
     8041 ggttgcgagg taatcaactt agggattatc cgcgacgatc cccatgccct gcgcgccgca
     8101 tttattgaag ccgacagcca ggcggatgta gtgatcagtt ccggcggtgt ttcagtgggt
     8161 gaagcggatt acaccaaaac gattcttgaa gagctggggg agatcgcctt ctggaagctg
     8221 gcgattaaac caggtaaacc gttcgcgttc ggtaaactca gcaatagctg gttctgcggc
     8281 ctgccgggca acccggtttc agcgacgctg accttctatc aactggtaca gcctttgctg
     8341 gcaaaactaa gcggcaacac cgccagcggc ctgcccgcgc gccagcgcgt acgcacagcg
     8401 tcccgcctga aaaaaacgcc aggacgtctt gatttccagc gcggcgtgct gcaacgcaac
     8461 gccgacggtg aacttgaagt gacgaccacc ggacatcagg gttcacatat atttagctcc
     8521 tttagtctcg gcaactgctt tatcgtgctg gaacgcgatc gcggcaatgt ggacgtgggc
     8581 gaatgggtgg aagtagaacc gtttaacgcg ttgttcggag gcctgtaatg gcggaactca
     8641 gcgatcagga gatgctgcgc tacaaccggc aaatcattct gcgcggtttt gattttgacg
     8701 gtcaggaggc gctaaaagat tctcgtgtgc tgatcgtcgg cctcggtgga ctcggctgcg
     8761 cagcttcgca gtatctggca agcgccggtg tcggcaacct gacgctgctc gacttcgaca
     8821 cggtttcgct ctcgaatctg caacgccaga cactgcacaa tgatgccacg gtcgggcaac
     8881 cgaaggtgga atccgcccgt gacgccctga cgcggatcaa cccacatatc gcgattacgc
     8941 cagtcaatgc actgctagat gacgcagaac ttgcagcatt gattgctgaa tacgatctgg
     9001 tgctcgactg tacggataac gttgcggtac gtaatcaact gaacgcaggc tgttttgccg
     9061 cgaaggtgcc gctggtttcc ggcgcggcaa ttcgtatgga agggcaaatc acggtcttca
     9121 cttatcagga cggcgaaccg tgctatcgct gccttagccg tttgtttggc gagaacgcgt
     9181 taacctgcgt agaagcaggc gtgatggcac cgttgatcgg cgtaattggt tcgttgcagg
     9241 caatggaagc gatcaaactg ctggcaggtt atggcaaacc ggccagcggg aaaatcgtca
     9301 tgtacgatgc gatgacctgt cagtttcgcg aaatgaaact gatgcgtaat ccggggtgtg
     9361 aggtgtgcgg gcagtaattg ccacctccag gccagataag acgcggcact ccgccacgtc
     9421 atcagcaatt tatgaggatg cagaacgtcc ggttaaatcg acgttctgcc aaacgctccc
     9481 agccagtcct gttcaaactt cgccacagcg gcatcaaccg ccggatagct aatcatctgt
     9541 tgtgccacat ccagtggcag cgtaattgat tcacatcctg ccagtaagca gtccagcgcc
     9601 tgacgcgggt ttttgaaact cgctgccagc actttcgcct gcggcgcatg cattttcaat
     9661 aactggtgta agtcggtcac agtctgaatg ccgctaccgc cctgagcatc aatacgatta
     9721 acgtaaggcg caacatattc cgcacctgcc agcgccgaca gcagcccttg tgctgcgcca
     9781 tataccgcgg ttcccagcgt tggaatccct tccgctttta acatcttaat agctgccagc
     9841 ccctcggcgg tcaccggaac tttcaccacg atatccgcaa taatagaacg caatttacgt
     9901 gcgtcattca ccatcccttc agcagtggta gccattacct gggcaaacag acgcccctga
     9961 ccgcccatcg cttcatgaag ttgcggaagc acaacatcca gcggtttttt acccgcggcg
    10021 ataatgcttg ggttagtggt cacacccgcc agcggaaaaa tacgtgacag cgccttcact
    10081 gcaacaacgt ctgaagtatc cagatacagt tccataacca tcctcaaaat gtactttttg
    10141 tctgaatgta gactatcacg ggaaaactct ctgaacagtt gacgcacatc aatccaactt
    10201 tcattcgaaa gtattttaat gtttgaacga aacagagagg caactatgat tttcaatatt
    10261 cagcgctact cgacccatga tggccccggt atccgcacgg tcgtatttct taaaggctgt
    10321 tcgctgggct gccgctggtg tcagaacccg gaaagccgcg cccgcacgca ggatctgctg
    10381 tatgacgcac gactgtgtct ggaaggctgc gagctgtgcg ctaaggcagc gccggaagtg
    10441 attgagcgcg cattgaatgg tttgcttatt catcgggaaa agttaacccc ggagcatctg
    10501 acggcgctaa ccgactgctg cccgacacag gcgttaaccg tgtgtgggga agtgaaaagc
    10561 gttgaggaga tcatggcgac cgttctgcgc gataaaccgt tttacgatcg cagcggcggc
    10621 ggcttaacgc tttcgggtgg tgaacccttt atgcagccgg aaatagcgac ggcgctactg
    10681 caagcctgcc acgaggcagg cattcatact gcggtagaaa cctgtctgca tgtgccgtgg
    10741 aaatatatca ccccttctct gccctatatc gatctgtttc ttgccgattt aaaacacatt
    10801 gccgacgcgc cgtttaaaca gtggaccgac ggtaacgccg ccaaggtgct ggataacctg
    10861 aaaaaactcg ccgcagcggg caaaaaaatc attatccgcg tgccgctgat tcagggcttt
    10921 aatgccgacg aaacctctgt aaaagccatt accgattttg ccgccgacga gctgcacgtt
    10981 ggcgaaattc attttctgcc ctaccacacg ctgggcatca acaaatatca cttacttaat
    11041 ctgccctatg acgccccgga aaaaccgctt gatgcgccag acctgctcga ctttgcccag
    11101 cagtatgcct gccagaaagg gttaaccgcg accttacgag gataacaacc atgaccacac
    11161 tgaaactgga cacgctcagc gaccgcatta aagcgcacaa aaatgcgctg gtgcatattg
    11221 tgaaaccgcc ggtctgtacc gagcgcgcgc agcactatac cgagatgtat caacaacatc
    11281 tcgataagcc gatcccggta cgtcgcgcgc tggctctggc gcatcacctg gcgaatcgca
    11341 ccatctggat caagcacgat gagttgatca tcggcaacca ggcaagcgag gttcgcgctg
    11401 cgccgatctt cccggaatat accgtctcgt ggatcgaaaa agagattgat gatctggcag
    11461 atcgtcccgg tgctggtttt gcggtgagcg aagagaacaa acgcgttctg catgaagtgt
    11521 gcccgtggtg gcgcggtcag acggtacagg atcgctgcta cggcatgttt accgatgagc
    11581 aaaaaggtct gctggcgacc ggaatcatta aagcggaagg caatatgacc tccggcgatg
    11641 cgcacctggc ggtgaatttc ccgctgctgc tggaaaaagg tcttgatggt ctgcgcgaga
    11701 aagtagcgga acgtcgctcg cgcatcaatc tgacggtact ggaagatttg cacggcgaac
    11761 agttcctgaa agcgattgat atcgtgctgg tggcagtcag cgaacacatt gaacgttttg
    11821 cagccctggc gcgtgaaatg gccgcgaccg aaacccgcga aagccgtcgc gatgaactgc
    11881 tggcgatagc agaaaactgc gatcttatcg cccaccagcc gccgcagact ttctggcagg
    11941 cgctgcaact gtgttacttc atccagttga tattgcagat cgaatctaac ggtcactcgg
    12001 tatcgtttgg tcgtatggac cagtatctct acccgtacta tcgccgagac gttgaactca
    12061 accagacact ggatcgcgaa cacgccatcg aattgctgca tagctgctgg ctgaaactgc
    12121 tggaagtgaa caagatccgc tccggctcac actcaaaagc ctctgcggga agtcctctgt
    12181 atcagaacgt caccattggc ggacaaactc tggttgatgg tcaaccaatg gacgcggtga
    12241 atccactctc ttacgcgatc ctcgaatcct gcggtcgcct gcgttccact cagcctaacc
    12301 tcagcgtgcg ttaccatgca ggaatgagta atgatttcct cgacgcctgc gtacaggtga
    12361 tccgttgcgg cttcgggatg ccggcgttca acaacgacga aatcgtgatc ccggaattta
    12421 ttaaactcgg tattgaaccg caggacgctt acgactacgc agcgattggt tgtatcgaaa
    12481 ccgccgtcgg tggcaaatgg ggctatcgct gtaccggcat gagctttatc aacttcgccc
    12541 gcgtgatgct ggcggcgctg gaaggcgggc gtgatgccac aagcggcaac gtgttcctgc
    12601 cacaagaaaa agcgttgtcg gcaggcaact ttaacaattt cgatgaagta atggacgcgt
    12661 gggatacgca aatccgttat tacacgcgta aatcaatcga aatcgaatat gtcgtcgaca
    12721 ccatgctgga agagaacgtg cacgatattc tctgctcggc gctggtggat gactgtattg
    12781 agcgagcgaa aagtatcaag caaggcggcg cgaaatatga ctgggtttct ggcctgcagg
    12841 ttggcattgc caacctcggc aacagcctgg cggcagtgaa gaaactggta tttgaacagg
    12901 gcgcgattgg tcagcaacag ctggctgccg cactggcgga tgacttcgat ggcctgactc
    12961 atgagcaact gcgtcagcgg ctgattaacg gtgcgccgaa gtacggcaac gacgatgata
    13021 ctgtcgatac gctgctggct cgcgcttatc agacctatat cgacgaactg aaacagtacc
    13081 ataatccgcg ctacggtcgt ggtccggttg gcggcaacta ttacgcgggt acgtcatcta
    13141 tctccgctaa cgtaccgttt ggtgcgcaaa ctatggcaac gccggacggg cgtaaagccc
    13201 acaccccgct ggcagaaggc gctagtccgg cctctggtac tgaccatctc ggccctactg
    13261 cggtcattgg ctcggtgggt aaactgccta cggcagcgat tctcggcggc gtgttgctca
    13321 accagaaact gaatccggca acgctggaga acgaatctga caagcagaag ctgatgatcc
    13381 tgctgcgcac cttcttcgag gtgcataaag gctggcatat tcagtacaac atcgtttccc
    13441 gcgaaacgct gctggaggcg aaaaaacatc cggatcagta ccgcgatctg gtagtgcgtg
    13501 tcgcgggtta ttccgccttc ttcaccgcgc tctctccaga cgctcaggac gatatcatcg
    13561 ctcgtactga acatatgctg taatctcttc ggcccggctg cggcgtcgcc gggctaaatc
    13621 attcacatca tcaatttcat ccttactttc attcgaaata taatttgtgc tctgcgtcac
    13681 attgttatta cactgttacg gtttcatttt cgagccagga gcacacctat gagcgtaaaa
    13741 gttatcgtca cagacatgga cggtactttt cttaacgacg ccaaaacgta caaccaacca
    13801 cgttttatgg cgcaatatca ggaactgaaa aagcgcggca ttgagttcgt tgtcgccagc
    13861 ggtaatcagt attaccagct tatttcgttc tttcctgagc taaaggatga gatctctttt
    13921 gtcgcggaaa acggcgcact ggtttacgaa catggcaagc aactgttcca cggcgaactg
    13981 acccgacatg aatcgcggat tgttattggc gagttgctaa aagataagca actcaatttt
    14041 gtcgcctgcg gtctgcaaag tgcatatgtc agcgaaaatg cccccgaagc atttgtcgca
    14101 ctgatggcaa aacactacca tcgcctgaaa gctgtaaaag attatcagga gattgacgac
    14161 gtactgttca agttttcgct caacctgcca gatgaacaaa tcccgttagt gatcgacaaa
    14221 ctgcacatag cgttcgatgg cattatgaaa cccgtcacca gtggttttgg ctttatcgac
    14281 ctgattattc ccggtctaca taaagcaaac ggtatttcgc ggttactgaa acgctgggat
    14341 ctgtcaccgc aaaatgtggt agcgattggc gacagcggta acgatgcgga gatgctgaaa
    14401 atggcgcgtt attcctttgc gatgggcaat gctgcggaaa acattaaaca aatcgcccgt
    14461 tacgctaccg atgataataa tcatgaaggc gcgctgaatg tgattcaggc ggtgctggat
    14521 aacacatccc cttttaacag ctgacctctc taccggagcc gtgcgctccg gttttccctt
    14581 ctttttacat cctgtacatc acatcaaatc attaaacttg cattaactta tttataactt
    14641 atattgtcac atgcaaatca taatggtttc gaatgaaagt taatgagagg tggttatggc
    14701 ttctactttt accagcgaca cattgccagc cgatcacaaa gcagctatcc gtcagatgaa
    14761 gcacgcgctg cgggcgcagc ttggcgacgt ccagcagatc tttaatcagc taagcgatga
    14821 cattgccacg cgagtggctg aaatcaacgc actcaaagca cagggcgatg ccgtctggcc
    14881 ggtgctgtct tatgccgata tcaaagcagg tcatgttact gcagagcagc gcgaacagat
    14941 taaacgtcgc ggttgtgcgg tgataaaagg ccatttcccc cgcgaacaag cgctaggctg
    15001 ggatcagtcg atgctggact atctggaccg caaccgcttt gacgaggtct acaaaggccc
    15061 cggcgataat ttcttcggga cgctcagcac ttcacgtccc gagatttacc ccatctactg
    15121 gtcgcagacg caaatgcagg cccgccagag tgaagaaatg gcgaatgcgc agtcgtttct
    15181 caatcgtctg tggacatttg aaagtgatgg aaagcaatgg tttaacccgg atgtgagcgt
    15241 catctaccct gaccgtatcc gccgccgtcc gcccggaacg acctccaaag gtcttggagc
    15301 gcataccgac tccggggcgc tggaacgctg gctgcttcca gcgtatcagc gcgttttcgc
    15361 caacgtcttt aatggcaatc tggcgcaata tgatccctgg catgcggcac atcgtacgga
    15421 agttgaagag tacacggtgg acaacaccac caaatgttcc gtgtttcgga cattccaggg
    15481 ctggacagcg ctctctgata tgctgcctgg tcaggggttg ctgcacgttg tgcccattcc
    15541 tgaagccatg gcgtacgtac tgttacgtcc gctgcttgat gatgtgccgg aggatgaact
    15601 gtgcggcgta gcgcccggaa gagtgttgcc ggtatcagag caatggcatc cactgttaat
    15661 tgaggcgtta accagcattc caaaactcga ggccggagac tccgtctggt ggcactgcga
    15721 cgtcatccat tccgttgccc ccgttgaaaa tcaacagggt tggggcaacg tgatgtacat
    15781 tcctgcggca ccgatgtgcg agaaaaatct tgcctacgcg cacaaggtga aggccgcact
    15841 ggaaaaaggc gcatcgccgg gcgacttccc gcacgaggac tatgaaacaa actgggaagg
    15901 acgctttacg cttgccgacc tcaacattca cggtaagcga gcgttgggca tggatgtttg
    15961 agagttaatg gaagtgaatt gatgtgggat taagaaaatc gattcgacgt tactcagatt
    16021 gctgacaagt gcgctttctt aatgcctgat gcggcgttaa cgccttatct ggcctacaaa
    16081 gtcctgcaga ttcaatatat tacaggtact gcgtaggcct gataagcgta gcgcatcagg
    16141 ctattttgca tttgtcatca gccgccgtca ccccgacagt atcggggtga cggataatca
    16201 cttactcgat ccctttacta cgcaggtaat cttcgtaatt accgctaaag tcgatcacgc
    16261 gttccggggt gatttccaga atgcgggtcg ccagggagct tacgaactca cggtcgtgtg
    16321 aaacaaagat cagcgtgccc tgatacagtt ccagcgccat gttcagtgac tcgatggatt
    16381 ccatatccag gtggttggtc ggttcgtcca tgatcagaat gttcggcttc tgcatcatta
    16441 acttaccaaa cagcatccgc cctttttccc caccggaaag cactttagct ggctttttga
    16501 tgtcgtcctg gctgaacagc aaacgaccga gaatgctgcg taccgcctgc tcgtcatcgc
    16561 cttcctgctt ccactgactc atccattcga acacggtcag atcattttca aactcatatt
    16621 cgtggtcctg ggcgtagtaa ccaatgcgcg cgttttcaga ccattttacg gtgccgctgt
    16681 ccggttgcag atcgcccacc agcgttttca tcagcgttga tttaccgacg ccgttggtac
    16741 ccagtaccgc aagtttttca ccgacctcca gcagcaggtt gagattttta aacagtggac
    16801 cgttatcaaa ccctttggtc agaccttcca cttccagcgc gttacggaac agtttcttat
    16861 cctgttcaaa acggatgaac gggttctgac ggctggaggc tttcacctct tccagtttga
    16921 ttttatcaat ctggcgcgcg cgcgaagttg cctggcgaga tttcgaggcg ttggcgctaa
    16981 agcggctaac gaaagattgc aactcagcaa tctgcgcttt cttcttggcg ttatcggcca
    17041 gcagacgttc acgcgcctgg gtcgccgccg tcatgtactc atcgtagtta cccggataaa
    17101 cgcgcagctc gccgtaatcc agatccgcca tgtgggtaca gaccatgtta aggaagtgac
    17161 ggtcgtgcga gatgatgatc atggtgctgt cacgctcgtt cagcacctgt tccagccagc
    17221 gaatggtgtc gatgtcgagg ttgttggtcg gttcgtcgag caggagaata tccggatcag
    17281 caaacagcgc ctgcgccaga agcacacgca gcttccagcc aggagcaact tcactcatcg
    17341 ggccgtagtg ctgttccact ggaattccca cgccaagcaa caattcaccg gcgcgagctt
    17401 ccgcagagta accgtccatt tcgccgtatt taacttccag atcggccact ttatagccgt
    17461 cttcctcact catttccggc aaagcataga tgcggtcacg ctcctgcttc acttcccaca
    17521 actctttatg ccccatgatc accgtatcca gcacagtgaa ctcttcaaag gcaaactgat
    17581 cctgacgcag cttaccaatg cgctcgttgg gatcgaggga aacgttaccc aaagtcggct
    17641 ctaagtcgcc gccgaggatc ttcataaagg tggatttacc actaccgttc gcgccaatca
    17701 ggccgtaacg gttgccgccg ccaaatttga cggaaatgtt ttcaaacaac ggcttactgc
    17761 cgaactgcat ggtgacgtta ctggaaacta acacaggcgt atcctgaaaa gagatatgac
    17821 aaaccgcgca ttatgccata agtctgaaag aagatcctgc tcctcgctta aggtctacac
    17881 tcaagccaaa ggcaaaaaat gtgatttcgt acacatctga tttcactgtg agctggaatg
    17941 aacttataat gcgcttccaa tactctaata ttctcaaccc aatggcctgc caggcacaaa
    18001 atctcgctta acatgaatat gaaattgaaa acattattcg cagcggcctt cgctgttgtc
    18061 ggcttttgca gtaccgcctc tgcggtaact tatcctctgc caaccgacgg gagtcgcctg
    18121 gttggtcaga atcaggtgat caccattcct gaaggtaaca ctcagccgct ggagtatttt
    18181 gccgcggagt accagatggg gctttccaat atgatggaag cgaacccggg tgtggatacc
    18241 ttcctgccga aaggcggtac tgtactgaac attccgcagc agctgatcct gccggatacc
    18301 gttcatgaag gcatcgtcat taacagtgca gagatgcgtc tgtattacta tccgaaaggg
    18361 accaacaccg ttatcgtgct gccgatcggc attggtcagt taggcaaaga tacgcctatc
    18421 aactggacca ccaaagttga gcgtaagaaa gcaggcccga cctggacgcc gaccgcaaaa
    18481 atgcacgcag agtaccgcgc tgcgggcgaa ccgcttccgg ctgtcgttcc ggcaggtccg
    18541 gataacccga tgggtctgta tgcactctac atcggtcgcc tgtatgctat ccatggcacc
    18601 aacgccaact tcggtatcgg cctgcgtgta agtcatggtt gtgtgcgtct gcgtaacgaa
    18661 gacatcaaat tcctgttcga gaaagtaccg gtcggtaccc gcgtacagtt tattgatgag
    18721 ccggtaaaag cgaccaccga gccagacggc agccgttata ttgaagtcca taacccgctg
    18781 tctaccaccg aagcccagtt tgaaggtcag gaaattgtgc caattaccct gacgaagagc
    18841 gtgcagacag tgaccggtca gccagatgtt gaccaggttg ttcttgatga agcgattaaa
    18901 aaccgctccg ggatgccggt tcgtctgaat taatcttcaa aacttaaagc aaaaggcgga
    18961 ctcataatcc gcctttttta tttgccagac cctagttggc cgggagtata actaacaaaa
    19021 catatcccac caacgccgcc cacaacagca tcggtattga atagagatgg aaacgccacc
    19081 agatgcggcg atcgttcgcc atacgtagcg caatcaaact tgccagcgat ccgggtaata
    19141 acccaaagcc acctacgttt accgcccatg ccagtaataa agacggcggc acatagttca
    19201 gcaacaatat ggtactcggc acgttactga tcacctgcga taaaccgatt gccgttaacc
    19261 ataacccggg ttcagataga tgactcacgt tacccaacac gccttgcaac gctggaagct
    19321 gggtcagtaa atggacgtcg ataaacatcg ccataaacac cagcagcagc gtccagtcca
    19381 cactgagcac cacgcgacgt gccagcagcg caaagcctgc cgccacaatc accagtcccc
    19441 acagctcttg tttgaactcc agcgccgtta gaaagacgat atacagcccc agacaactcc
    19501 acaccagccg cggtttccac tccggtgttt gcacccccgt atggtattgc agcacctttc
    19561 cagggaaaca acaccagcac aggagcagga gcgtcagcat cattgcgcca gccagcggtg
    19621 ccatttgggc aataaatccg gcaaacgaaa gaccagaacg tccccagata agaatatttt
    19681 gcgggttgcc aattggcgtc agtagcgaac cagcattgac tgccagcgcc tcaaaaataa
    19741 tcagacgatt aaccgggatc tcacacagtc tttttagcgt gatagtcagc ggaacaacaa
    19801 taaacagcgc gacatcgttg gtcagaaagg tagaaagcag cgccgccgcc agcaccataa
    19861 acatcgccag ccgacgctcc gtagcaaagc ggcgcaccat tttgcgcccc agcacatcaa
    19921 aataaccgct taactccaca cctttggtca gcagcatcag gccgcttaag gtgatgatgg
    19981 tgtgccagtc gatagcagca ggccaggatt tcggtgcaaa gggcacgaaa aagcttaatc
    20041 cgataccaac aagaattaat aactgaaaaa aacgatcgcc ttgcagcgtg cgtaaaaaag
    20101 gcaggctcat ttggtaccgt gtttctgggt aaacaaacga aaagcgtcga gcgtctcttc
    20161 actaacatgg tgctccatgc cttccgcgtc gcgacgggcg atttccggac tgacgcccaa
    20221 caccaacaag aaattttcga ctatctgatg tcgctcgcgg ctttcctgcg ccagcttctc
    20281 tccttctgcc gttaaaaaca cgccacgcca ggggatcatt tcaatcagcc ccatggttgc
    20341 cagccgctta agcattttag ccaccgtcgg ttgcgaaact cccagacgag cagccatgtc
    20401 cacctgacga gcttccccca cttccctgat caagtcagaa atcagctcaa cgtaatcatc
    20461 aataagctcg cgccgatgcg cctctctgac ctggcggaac ccttcaacgt gctcttccac
    20521 gttcactaac tgcgtcactt tttttgctgt tggcgtacct gcgcgacgac tcattgtgct
    20581 tcctcattat ggtgacgcat acatagcgtt ctcatttcgt gcgcacattg taaaccagag
    20641 ttgcgaaggt acaaaaaatt aacgttttag caatagctat ataatatagc ctgtgctata
    20701 tctgtatgta atgcaatcat ccctcaagga tcgacgggat tagcaagtca ggaggtctta
    20761 tgaatgagtt caagaggtgt atgcgcgtgt ttagtcattc tccctttaaa gtacggttaa
    20821 tactgctctc tatgttgtgc gatatggtca acaacaaacc gcagcaagat aaaccttccg
    20881 ataaatagcg gcgtcgcggt acgccgcttc actcctgctt tcatgcaggc ataacgcgtt
    20941 ttggcctgaa aaaccccact ttttgtcgga tttgcaatcc ccttcgcaaa agatttgttc
    21001 gtcagtagtt gacctgaacg gcggctcgct ctatcttctt gcagccctgc gtatattgcg
    21061 gctcgcggat gcggacccct ttccactctt cacgcactct tgcaggtatt gacccttgac
    21121 gccagggtaa gcacatggcg tttgttacga tagtggcata tgaatttaac cctcaaagaa
    21181 tcgcttgtta cccgtagccg ggtatttagc ccgtggactg cgttctactt tttacagtcg
    21241 ctattaatta acctcggctt aggttacccc ttcagtttgc tctacaccgc tgcgtttacg
    21301 gctattttgc ttttgctatg gcgaacattg cctcgcgtac aaaaagttct ggtcggtgtc
    21361 agttcgctgg tggcggcttg ttatttccct tttgctcagg cctacggcgc gcctaatttc
    21421 aatacattgc tggcattgca ctccaccaat atggaagagt cgaccgaaat cctgacgatt
    21481 tttccgtggt acagctacct ggtcggctta tttatttttg cgctcggcgt aatagcaatc
    21541 aggcgaaaaa aagagaatga aaaagcgcgc tggaatacct tcgacagcct gtgtctggta
    21601 ttcagtgtgg cgacattttt tgttgctccc gtgcaaaacc tggcctgggg tggcgtattt
    21661 aaactgaaag atactggcta tccggtattt cgttttgcta aggatgtcat cgtcaataat
    21721 aacgaggtga ttgaagagca agaacggatg gcaaaacttt ccggaatgaa agatacctgg
    21781 acggtcactg ccgttaagcc gaagtatcag acctatgtgg tggtgatcgg tgaaagcgcg
    21841 cgtcgcgatg ccctcggtgc ctttggcggt cactgggaca ataccccgtt tgccagcagc
    21901 gttaacggtt tgatatttgc tgactacatt gccgccagtg gctccacgca gaaatcgctt
    21961 ggcttaacgc tcaatcgcgt agtcgatggc aaaccacagt ttcaggataa ctttgtcacc
    22021 ctggcaaatc gcgcgggctt ccagacctgg tggttttcca accagggcca aatcggcgaa
    22081 tacgatactg ctatcgccag catcgccaaa cgtgcagatg aagtgtactt cctgaaagaa
    22141 ggtaattttg aagcagataa aaacacgaaa gacgaagcgt tactggatat gaccgctcaa
    22201 gtgctggcgc aagagcactc gcaaccgcag ctgattgttc tgcatctgat gggctcgcat
    22261 ccgcaggcct gcgacaggac acaaggcaaa tacgaaacct ttgtgcaatc gaaagaaacg
    22321 tcgtgctatc tctataccat gacgcaaacg gacgatttac tgcgcaagct gtacgatcag
    22381 ttacgcaaca gcggcagcag cttctctctg gtttactttt ctgaccacgg tctggccttt
    22441 aaagagcgcg gcaaagacgt gcaatacctt gcccatgatg ataaatatca gcaaaatttc
    22501 caggtgcctt ttatggtcat ttccagcgac gataaagcgc atcgggtgat taaagcccgc
    22561 cgctcagcca atgacttctt aggctttttc tcgcagtgga cgggaattaa agcgaaggaa
    22621 ataaatatca aatacccgtt tatatctgag aagaaagccg ggccgatata catcaccaac
    22681 ttccagttac agaaggtgga ttacaaccat ctcggaaccg atattttcga cccgaaacct
    22741 taaaaacaaa aatccgcccc gagaggcgga ttttttatat caccaaagtg attagaagcg
    22801 gtaaccaaca ccggcaatcc aggtgcctac gtcaacgcta cgaatacggc tctgctcgta
    22861 agagaagtcc agagcaacgt tttccatcgg gttgaactgc agaccagcac cgtaggagaa
    22921 accgtagtcg ctggtgtcgt gtttgtaggt cgggtattca gtggtctgga atttaccata
    22981 acccacaccc actacaccgt agatgcttgc ccagtcgtta atgcggtaag ccggaccagc
    23041 agtgatgccg tagtactggt ttttgttgta gtcaccagag cttgcagtac gacttttctc
    23101 ggtgtaagtg aaagaaccga tcacacccag cgggctgttg tcttcttcat agcggtattt
    23161 caggttgaaa ccgcccattt tgttcatttg gccctgagcg tcgctctgtg cgtaaccgcc
    23221 agttacggta gaagtcgcag ctacggaagt acctgcggtg aaagccagaa ctgcggccag
    23281 tgctgaaaga catgcaattt ttttcataac cacctcaaat gtgattcaaa taagtcctaa
    23341 gttttaaata tatcaaaaat taatgggaaa ctcttcgcga tttgtgatgt ctaacgggcc
    23401 atttcatgta acagaacgtt tccatacacc gctatccatc taaatttaaa tcactttttc
    23461 agagaactgc gtaagtatta cgcatgtttt ccctgtcatt catccagatt attcctaatc
    23521 accagactaa tgattccatc aatcctggcg cattttagtc aaaacggggg aaaatttttt
    23581 caacaaatgc tcaaccagca ttgggtatat ccagtacact ccacgcttta cttaagtcta
    23641 gatatttgtg ggagaaagga tgcctggttc attacgtaaa atgccggtct ggttaccaat
    23701 agtcatattg ctcgttgcca tggcgtctat tcagggtgga gcctcgttag ctaagtcact
    23761 ttttcctctg gtgggcgcac cgggtgtcac tgcgctgcgt ctggcattag gaacgctgat
    23821 cctcatcgcg ttctttaagc catggcgact gcgctttgcc aaagagcaac ggttaccgct
    23881 gttgttttac ggcgtttcgc tgggtgggat gaattatctt ttttatcttt ctattcagac
    23941 agtaccgctg ggtattgcgg tggcgctgga gttcaccgga ccactggcgg tggcgctgtt
    24001 ctcttctcgt cgcccggtag atttcgtctg ggttgtgctg gcggttcttg gtctgtggtt
    24061 cctgctaccg ctggggcaag acgtttccca tgtcgattta accggctgtg cgctggcact
    24121 gggggccggg gcttgttggg ctatttacat tttaagtggg caacgcgcag gagcggaaca
    24181 tggccctgcg acggtggcaa ttggttcgtt gattgcagcg ttaattttcg tgccaattgg
    24241 agcgcttcag gctggtgaag cactctggca ctggtcggtt attccattgg gtctggctgt
    24301 cgctattctc tcgaccgctc tgccttattc gctggaaatg attgccctca cccgtttgcc
    24361 aacacggaca tttggtacgc tgatgagcat ggaaccggcg ctggctgccg tttccgggat
    24421 gattttcctc ggagaaacac tgacacccat acagctgctg gcgctcggcg ctatcatcgc
    24481 cgcttcaatg gggtctacgc tgacagtacg caaagagagc aaaataaaag aattagacat
    24541 taattaaatt tacatttctg catggttatg cataaccatg cagaatttct cgctactttt
    24601 cctctacacc gtctttatat atcgaattat gcaaaagcat atttattccg aaaattcctg
    24661 gcgagcagat aaataagaat tgttcttatc aatatatcta actcattgaa tctttattag
    24721 ttttgttttt cacgcttgtt accactatta gtgtgatagg aacagccaga atagcggaac
    24781 acatagccgg tgctatactt agtctcgtta attactggga cataacatca agaggatatg
    24841 aaattatgag taccgctaaa ttagttaaat caaaagcgac caatctgctt tatacccgca
    24901 acgatgtctc cgacagcgag aaaaaagcaa cagtagagtt gctgaatcgc caggttatcc
    24961 agtttattga tctttctttg attaccaaac aagcgcactg gaacatgcgc ggcgctaact
    25021 tcattgccgt acatgaaatg ctggatggct tccgcaccgc actgatcgat catctggata
    25081 ccatggcaga acgtgcagtg cagctgggcg gtgtagctct ggggaccact caagttatca
    25141 acagcaaaac cccgctgaaa agttacccgc tggacatcca caacgttcag gatcacctga
    25201 aagaactggc tgaccgttac gcaatcgtcg ctaatgacgt acgcaaagcg attggcgaag
    25261 cgaaagatga cgacaccgca gatatcctga ccgccgcgtc tcgcgacctg gataaattcc
    25321 tgtggtttat cgagtctaac atcgaataaa tccatcgctg atggtgcaga actttagtac
    25381 ccgataaaag cggcttcctg acaggaggcc gttttgtttt gcagcccacc tcaacgcact
    25441 tatttagtgc atccatctgc tatctccagc tgattaagta aattttttgt atccacatca
    25501 tcacacaatc gttacataaa gattgttttt tcatcaggtt ttacgctaaa taatcactgt
    25561 gttgagtgca caattttagc gcaccagatt ggtgccccag aatggtgcat cttcagggta
    25621 ttgccctata aatcgtgcat cacgtttttg ccgcatctct aaaaatcaat gagttgcaaa
    25681 actggcacga ttttttcata tatgtgaatg tcacgcaggg gatcgtcccg tggatagaaa
    25741 aaaggaaatg ctatgaagtc tgtattaaaa gtttcactgg ctgcactgac cctggttttt
    25801 gcggtttctt ctcatgccgc ggataaaaaa ttagttgtcg cgacggatac cgccttcgtt
    25861 ccgtttgaat ttaaacaggg cgataaatat gtgggctttg acgttgatct gtgggctgcc
    25921 atcgctaaag agctgaagct ggattacgaa ctgaagccga tggatttcag tgggatcatt
    25981 ccggcactgc aaaccaaaaa cgtcgatctg gcgctggcgg gcattaccat caccgacgag
    26041 cgtaaaaaag cgatcgattt ctctgacggc tactacaaaa gcggcctgtt agtgatggtg
    26101 aaagctaaca ataacgatgt gaaaagcgtg aaagatctcg acgggaaagt ggttgctgtg
    26161 aagagcggta ctggctccgt tgattacgcg aaagcaaaca tcaaaactaa agatctgcgt
    26221 cagttcccga acatcgataa cgcctatatg gaactgggca ccaaccgcgc agacgccgtt
    26281 ctgcacgata cgccaaacat tctgtacttc atcaaaaccg ccggtaacgg tcagttcaaa
    26341 gcggtaggtg actctctgga agcgcagcaa tacggtattg cgttcccgaa aggtagcgac
    26401 gagctgcgtg acaaagtcaa cggcgcgttg aaaaccctgc gcgagaacgg aacttacaac
    26461 gaaatctaca aaaaatggtt cggtactgaa ccgaaataat aacgctacac ctgtaaagcg
    26521 cactggcagt tccctctccc ctctggggag aggattaggg tgaggggcgc aaacccgctc
    26581 cggggccatt aattaccctg aatttgatta tttacaccac ggtaacagga acaacatatg
    26641 cagtttgact ggagtgccat ctggcctgcc attccgcttc tgattgaagg tgccaaaatg
    26701 accctgtgga tttcggtcct cggtctggct ggcggtctgg taatcggatt gctggcaggt
    26761 tttgcacgca ccttcggtgg ttggatagcc aaccacgtcg cgctggtctt tattgaagtg
    26821 atccgcggca cacctatcgt cgtccaggtg atgtttatct atttcgccct gccgatggcg
    26881 tttaacgact tacgcatcga cccatttact gcggcggtgg tcaccatcat gatcaactcc
    26941 ggcgcgtaca ttgcggaaat cacgcgtggt gcggtgctgt ctattcacaa aggttttcgt
    27001 gaagcaggac tggcgctcgg tctttcacgt tgggaaacca ttcgctacgt cattttaccg
    27061 ctggcactgc gtcgtatgct gccgccgctg ggtaaccagt ggatcatcag cattaaagac
    27121 acctcgctgt ttattgttat cggcgtggcg gaactgaccc gtcaggggca agaaattatt
    27181 gccggtaact tccgcgccct tgagatctgg agcgccgtgg cggtgttcta tctgattatt
    27241 accctggtgc tgagctttat tctgcgtcgt ctggaaagaa ggatgaaaat cctgtgattg
    27301 aatttaaaaa cgtctccaag cactttggcc caacccaggt gctgcacaat atcgatttga
    27361 acattgccca gggcgaagtc gtggtgatta tcgggccgtc cggttccggt aaatcgaccc
    27421 tgctgcgctg catcaacaaa ctggaagaaa tcacctccgg cgatctgatt gtcgatggcc
    27481 tgaaggttaa cgatccgaaa gttgacgagc gcctgattcg ccaggaagca ggtatggtgt
    27541 tccagcagtt ttacctcttc ccgcatctga cggcgctgga aaacgtcatg tttggtccgc
    27601 tacgcgtgcg tggcgcgaac aaagaagagg cggaaaaact ggcgcgtgag ctgctggcga
    27661 aagtcggtct ggcagaacgt gcacatcact acccttccga actttctggt ggtcaacagc
    27721 agcgtgtggc gattgcccgc gcgctggcgg tgaagccgaa aatgatgctg tttgatgaac
    27781 cgacttccgc tcttgacccg gaactgcgcc atgaagtgct gaaggttatg caggatctgg
    27841 ctgaagaagg gatgacgatg gtgatcgtga cccacgaaat cggttttgcc gagaaagtag
    27901 cttcgcggct gatctttatc gacaaaggcc ggattgcgga agatggcaat ccgcaggtgt
    27961 tgatcaagaa cccgccgagc cagcgcttgc aggaattttt gcagcacgtc tcttaataag
    28021 acacattgcc tgatgcgcta cgcttatcag gcctacagga tatctggcaa cttattaaaa
    28081 ttgcatgaac ttgtaggacg gataaggcgt tcacgccgca tccggcaaaa aagcccgcac
    28141 gttgtcagca atctgcttaa tatcccttcc tccctttcac ccgaaaggga ggcacaccag
    28201 attcctctca tttaaaatcg cccc
//
LOCUS       DADMJE010000037        27675 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.038, whole genome shotgun sequence.
ACCESSION   DADMJE010000037 DADMJE010000000
VERSION     DADMJE010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27675)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27675)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27675
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.038"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(210..419)
                     /gene="fumD"
                     /locus_tag="JN001_001464"
     CDS             complement(210..419)
                     /gene="fumD"
                     /locus_tag="JN001_001464"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase FumD"
                     /protein_id="HAY9052740.1"
                     /translation="MGNRTKEDELYREMCRVVGKVVLEMRDLGQEPKHIVIAGVLRTA
                     LANKRIQRSELDKQAMETVINALVK"
     gene            976..2388
                     /locus_tag="JN001_001465"
     CDS             976..2388
                     /locus_tag="JN001_001465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010346010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase I"
                     /protein_id="HAY9052741.1"
                     /translation="MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHG
                     QRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGN
                     SEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKVICKVLNNGDLGENKGVNL
                     PGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHII
                     SKIENQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVIT
                     ATQMLDSMIKNPRPTRAEAGDVANAILDGTDAVMLSGESAKGKYPLEAVSIMATICER
                     TDRVMNSRLEFNNDNRKLRITEAVCRGAVETAEKLDAPLIVVATQGGKSARAVRKYFP
                     DATILALTTNEKTAHQLVLSKGVVPQLVKEITSTDDFYRLGKELALQSGLAHKGDVVV
                     MVSGALVPSGTTNTASVHVL"
     gene            2699..2935
                     /locus_tag="JN001_001466"
     CDS             2699..2935
                     /locus_tag="JN001_001466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006675846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major outer membrane lipoprotein"
                     /protein_id="HAY9052742.1"
                     /translation="MKATKLVLGAVILGSTLLAGCSSNAKIDQLSSDVQTLNAKVDQL
                     SNDVNAMRSDVQAAKDDAARANQRLDNMATKYRK"
     gene            complement(2999..4003)
                     /gene="ldtE"
                     /locus_tag="JN001_001467"
     CDS             complement(2999..4003)
                     /gene="ldtE"
                     /locus_tag="JN001_001467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtE"
                     /protein_id="HAY9052743.1"
                     /translation="MKRASLLTLTLIGAFSAIQAAWAVDYPLPPTGSRLVGQNQTYTV
                     QEGDKNLQAIARRFDTAAMLILEANNTIAPVPKPGTTITIPSQLLLPDAPRQGIIVNL
                     AELRLYYYPPGENIVQVYPIGIGLQGLETPVMETRVGQKIPNPTWTPTAGIRQRSLER
                     GIKLLPVVPAGPNNPLGRYALRFAHGNGEYLIHGTSAPDSVGLRVSSGCIRMNAPDIK
                     ALFSSVRTGTPVKVINEPVKYSVEPNGMRYVEVHRPLSAEEQQNVQTMPYTLPAGFTQ
                     FKDNKAVDQKLVDKALYRRAGYPVSVSSGATPAASNAPSVESAQNGEPEQGNMLRARQ
                     "
     gene            complement(4152..4568)
                     /gene="sufE"
                     /locus_tag="JN001_001468"
     CDS             complement(4152..4568)
                     /gene="sufE"
                     /locus_tag="JN001_001468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfuration protein SufE"
                     /protein_id="HAY9052744.1"
                     /translation="MALLPDKEKLLRNFLRCANWEEKYLYIIELGQRLPELRDEDRSP
                     QNSIQGCQNQVWIVMRQNAQGIIELQGDSDAAIVKGLIAVVFILYDQMTPQDIVNFDV
                     RPWFEKMALTQHLTPSRSQGLEAMIRAIRAKAAALS"
     gene            complement(4581..5801)
                     /gene="sufS"
                     /locus_tag="JN001_001469"
     CDS             complement(4581..5801)
                     /gene="sufS"
                     /locus_tag="JN001_001469"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase SufS"
                     /protein_id="HAY9052745.1"
                     /translation="MTFSVDKVRADFPVLSREVNGLPLAYLDSAASAQKPSQVIDAEA
                     EFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVA
                     NSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLHTL
                     FDEKTRLLAITHVSNVLGTENPLAGMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCD
                     FYVFSGHKLYGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEA
                     GTPNTGGIIGLGAALEYVSVLGLNNIAEYELNLMHYALSQLESVPNLTLYGPQNRLGV
                     IAFNLGKHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYNTHEEVD
                     RLVTGLQRIHRLLG"
     gene            complement(5798..7069)
                     /gene="sufD"
                     /locus_tag="JN001_001470"
     CDS             complement(5798..7069)
                     /gene="sufD"
                     /locus_tag="JN001_001470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HAY9052746.1"
                     /translation="MAGLPNSSNALQQWHHLFEAEGTKRSPQAQQHLQQLLRTGLPTR
                     KHENWKYTSLEGLTNSQFVSIAGEISPQQRDALALTLDAVRLVFVDGRYVPALSDAIE
                     GSGYEVSINDDRQGLPDAIQAEVFLHLTESLAQSVTHIAVKRGQRPAKPLLLMYITQG
                     VAGEEVNTAHYRHHLDLAEGAEATVIEHFVSLNDARHFTGARFTINVAANAHLQHIKL
                     AFENPLSHHFAHNDLLLAEDATAFSHSFLLGGAVLRHNTSTQLNGENSTLRINSLAMP
                     VKNEVCDTRTWLEHNKGFCNSRQLHKTIVSDKGRAVFNGLINVAQHAIKTDGQMTNNN
                     LLMGKLAEVDTKPQLEIYADDVKCSHGATVGRIDDEQMFYLRSRGINQQDAQQMIIYA
                     FAAELTEALRDEGLKQQVLARIGQRLPGGAR"
     gene            complement(7044..7790)
                     /gene="sufC"
                     /locus_tag="JN001_001471"
     CDS             complement(7044..7790)
                     /gene="sufC"
                     /locus_tag="JN001_001471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008500629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HAY9052747.1"
                     /translation="MLSIKDLHVSVEDKAILRGLSLAVRPGEVHAIMGPNGSGKSTLS
                     ATLAGREDYEVTGGTVEFKGKDLLALSPEDRAGEGIFMAFQYPVEIPGVSNQFFLQTA
                     LNAVRSYRGQETLDRFDFQDLMEEKIALLKMPEDLLTRSVNVGFSGGEKKRNDILQMA
                     VLEPELCILDESDSGLDIDALKVVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHV
                     LYQGRIVKSGDFTLVKQLEEQGYGWLTEQQ"
     gene            complement(7800..9287)
                     /gene="sufB"
                     /locus_tag="JN001_001472"
     CDS             complement(7800..9287)
                     /gene="sufB"
                     /locus_tag="JN001_001472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416198.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HAY9052748.1"
                     /translation="MSRNTEATDDVKTWTGGPLNYKEGFFTQLATDELAKGINEEVVR
                     AISAKRNEPEWMLEFRLNAYRAWLEMEEPHWLKAHYDKLNYQDYSYYSAPSCGNCDDT
                     CASEPGAVQQTGANAFLSKEVEAAFEQLGVPVREGKEVAVDAIFDSVSVATTYREKLA
                     EQGIIFCSFGEAIHDHPELVRKYLGTVVPGNDNFFAALNAAVASDGTFIYVPKGVRCP
                     MELSTYFRINAEKTGQFERTILVADEDSYVSYIEGCSAPVRDSYQLHAAVVEVIIHKN
                     AEVKYSTVQNWFPGDNNTGGILNFVTKRALCEGENSKMSWTQSETGSAITWKYPSCIL
                     RGDNSIGEFYSVALTSGHQQADTGTKMIHIGKNTKSTIISKGISAGHSQNSYRGLVKI
                     MPTATNARNFTQCDSMLIGANCGAHTFPYVECRNNSAQLEHEATTSRIGEDQLFYCLQ
                     RGISEEDAISMIVNGFCKDVFSELPLEFAVEAQKLLAISLEHSVG"
     gene            complement(9296..9664)
                     /gene="sufA"
                     /locus_tag="JN001_001473"
     CDS             complement(9296..9664)
                     /gene="sufA"
                     /locus_tag="JN001_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly scaffold SufA"
                     /protein_id="HAY9052749.1"
                     /translation="MDMHSGTFNPQDFAWQGLTLTPAAAIHIRELVAKQPGMVGVRLG
                     VKQTGCAGFGYVLDSVSEPDKDDLLFEHDGAKLFVPLQAMPFIDGTEVDFVREGLNQI
                     FKFHNPKAQNECGCGESFGV"
     gene            complement(10212..10400)
                     /locus_tag="JN001_001474"
     CDS             complement(10212..10400)
                     /locus_tag="JN001_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416200.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052750.1"
                     /translation="MSTQLDPTQLAIEFLRRDQSNLSPAQYLKRLKQLELEFADLLTL
                     SSAELKEEIYFAWRLGVH"
     gene            complement(10500..10910)
                     /gene="menI"
                     /locus_tag="JN001_001475"
     CDS             complement(10500..10910)
                     /gene="menI"
                     /locus_tag="JN001_001475"
                     /EC_number="3.1.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA hydrolase"
                     /protein_id="HAY9052751.1"
                     /translation="MIWKRKITLEALNAMGEGNMVGFLDIRFEHIGDDTLEATMPVDS
                     RTKQPFGLLHGGASVVLAESIGSVAGYLCTEGEQKVVGLEINANHVRSAREGRVRGIC
                     KPLHLGSRHQVWQIEIFDEKGRLCCSSRLTTAIL"
     gene            complement(10907..13963)
                     /locus_tag="JN001_001476"
     CDS             complement(10907..13963)
                     /locus_tag="JN001_001476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY9052752.1"
                     /translation="MIPQISQAPGVVQLVLNFLQELEQQGFTGDTATSYADRLTMSTD
                     NSIYQLLPDAVVFPRSTADVALIARLAAQERYSSLIFTPRGGGTGTNGQALNQGIIVD
                     MSRHMNRIIEINPEEGWVRVEAGVIKDQLNQYLKPFGYFFAPELSTSNRATLGGMINT
                     DASGQGSLVYGKTSDHVLGVRAVLLGGDVLDTQPLPVELAETLGKSNTTIGRIYNTVY
                     QRCRQQRQLIIDNFPKLNRFLTGYDLRHVFNDEMTEFDLTRILTGSEGTLAFITEARL
                     DITRLPKVRRLVNVKYDSFDSALRNAPFMVEARALSVETVDSKVLNLAREDIVWHSVS
                     ELITDVPDQEMLGLNIVEFAGDDEALIDERVNALCARLDELIASHQAGVIGWQVCREL
                     AGVERIYAMRKKAVGLLGNAKGAAKPIPFAEDTCVPPEHLADYIAEFRALLDSHGLSY
                     GMFGHVDAGVLHVRPELDMCDPQQEILMKQISDDVVALTAKYGGLLWGEHGKGFRAEY
                     SPAFFGEELFAELRKVKAAFDPHNRLNPGKICPPEGLDAPMMKVDAVKRGTFDRQIPI
                     AVRQQWRGAMECNGNGLCFNFDARSPMCPSMKITQNRIHSPKGRATLVREWLRLLADR
                     GVDPLKLEQELPESGVSLRTLIARTRNSWHANKGEYDFSHEVKEAMSGCLACKACSTL
                     CPIKIDVPEFRSRFLQLYHTRYLRPLRDHLVATVESYAPLMARAPKTFNFFINQPLVR
                     KLSEKHIGMVDLPLLSVPSLQQQMVGHRSANMTLEQLESLNAEQKARTVLVVQDPFTS
                     YYDAQVVADFVRLVEKLGFQPVLLPFSPNGKAQHIKGFLNRFAKTAKKTADFLNRMAK
                     LGMPMVGVDPALVLCYRDEYKLALGEERGEFNVLLANEWLASALESQPVATVSGESWY
                     FFGHCTEVTALPGAPAQWAAIFARFGAKLENVSVGCCGMAGTYGHEAKNHENSLGIYE
                     LSWHQAMQRLPRNRCLATGYSCRSQVKRVEGTGVRHPVQALLEIIK"
     gene            14352..15464
                     /gene="ydiK"
                     /locus_tag="JN001_001477"
     CDS             14352..15464
                     /gene="ydiK"
                     /locus_tag="JN001_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter YdiK"
                     /protein_id="HAY9052753.1"
                     /translation="MVNVRQPRDVAQILLSVLFLAIMIVACLWIVQPFILGFAWAGTV
                     VIATWPVLLRLQKIMFGRRSLAVLVMTLLLVMVFIIPIALLVNSIVDGSGPLIKAISS
                     GDMTLPDLAWLNTIPVIGAKLYAGWHNLLDMGGTAIMAKVRPYIGTTTTWFVGQAAHI
                     GRFMVHCALMLLFSALLYWRGEQVAQGIRHFATRLAGVRGDAAVLLAAQAIRAVALGV
                     VVTALVQAVLGGIGLAVSGVPYATLLTVLMILSCLVQLGPLPVLIPAIIWLYWTGDTT
                     WGTVLLVWSGVVGTLDNVIRPMLIRMGADLPLILILSGVIGGLIAFGMIGLFIGPVLL
                     AVSWRLFAAWVEEVPPPTDQPEEILEELGEIEKPNK"
     gene            15650..15757
                     /gene="rprA"
                     /locus_tag="JN001_001478"
     ncRNA           15650..15757
                     /ncRNA_class="antisense_RNA"
                     /gene="rprA"
                     /locus_tag="JN001_001478"
                     /product="antisense sRNA RprA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00034"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00034"
     gene            15893..16272
                     /locus_tag="JN001_001479"
                     /pseudo
     CDS             15893..16272
                     /locus_tag="JN001_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001014786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YdiL family protein"
     gene            16217..16939
                     /locus_tag="JN001_001480"
                     /pseudo
     CDS             16217..16939
                     /locus_tag="JN001_001480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707590.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
     gene            16951..17817
                     /gene="ydiB"
                     /locus_tag="JN001_001481"
                     /pseudo
     CDS             16951..17817
                     /gene="ydiB"
                     /locus_tag="JN001_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416207.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="quinate/shikimate dehydrogenase"
     gene            17849..18607
                     /gene="aroD"
                     /locus_tag="JN001_001482"
     CDS             17849..18607
                     /gene="aroD"
                     /locus_tag="JN001_001482"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HAY9052754.1"
                     /translation="MKTVTVKDLVIGTGAPKIIVSLMAKDIARVKSEALAYREADFDI
                     LEWRVDHFADLSNVESVMAAAKILRETMPEKPLLFTFRSAKEGGEQAISTEAYIALNR
                     AAIDSGLVDMIDLELFTGDDQVKETVACAHAHDVKVVMSNHDFHKTPEAEEIIARLRK
                     MQSFDADIPKIALMPQSTSDVLTLLAATLEMQEQYADRPIITMSMAKTGVISRLAGEV
                     FGSAATFGAVKKASAPGQISVNDLRTVLTILHQA"
     gene            18753..20348
                     /locus_tag="JN001_001483"
     CDS             18753..20348
                     /locus_tag="JN001_001483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HAY9052755.1"
                     /translation="MKPVKPPRINGRVPVLSAQEAVNYIPDEATLCVLGAGGGILEAT
                     TLITALADKYKQTQTPRNLSIISPTGLGDRADRGISPLAQEGLVKWALCGHWGQSPRI
                     SELAEQNKIIAYNYPQGVLTQTLRAAAAHQPGIISDIGIGTFVDPRQQGGKLNEVTKE
                     DLIKLVEFDNKEYLYYKAIAPDIAFIRATTCDSEGYATFEDEVMYLDALVIAQAVHNN
                     GGIVMMQVQKMVKKATLHPKSVRIPGYLVDIVVVDPDQSQLYGGAPVNRFISGDFTLD
                     DSTKLSLPLNQRKLVARRALFEMRKGAVGNVGVGIADGIGLVAREEGCADDFILTVET
                     GPIGGITSQGIAFGANVNTRAILDMTSQFNFYHGGGLDVCYLSFAEVDQHGNVGVHKF
                     NGKIMGTGGFIDISATSKKIIFCGTLTAGSLKTEIADGKLNIVQEGRVKKFIQELPEI
                     TFSGKIALERELDVRYITERAVFTLKEDGLHLIEIAPGVDLQKDILDKMDFTPVISPE
                     LKLMDERLFIDAAMGFVLPEAAH"
     gene            20362..21513
                     /locus_tag="JN001_001484"
     CDS             20362..21513
                     /locus_tag="JN001_001484"
                     /EC_number="1.3.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310429.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY9052756.1"
                     /translation="MDFSLTEEQELLLASIRELITTNFAEEYFRTCDQNGTYPREFMR
                     ALADNGISMLGVPEEFGGIPADYVTQMLALMEVSKCGAPAFLITNGQCIHSMRRFGSA
                     EQLRKTAESTLETGDPAYALALTEPGAGSDNNSATTTYTRKNGKVYINGQKTFITGAK
                     EYPYMLVLARDPQPKDPKKAFTLWWVDSSKPGIKINPLHKIGWHMLSTCEVYLDNVEV
                     EESDMVGEEGMGFLNVMYNFEMERLINAARSTGFAECAFEDAARYANQRIAFGKPIGH
                     NQMIQEKLALMAIKIDNMRNMVLKVAWQADQHQSLRTSAALAKLYCARTAMEVIDDAI
                     QIMGGLGYTDEARVSRFWRDVRCERIGGGTDEIMIYVAGRQILKDYQNK"
     gene            complement(21556..22467)
                     /locus_tag="JN001_001485"
     CDS             complement(21556..22467)
                     /locus_tag="JN001_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY9052757.1"
                     /translation="MYQRCFDNASETLFVAGKTPRLSRFAFSDDPKWESGHHVHDNET
                     ELIYVKKGVARFTIDSSLYVAHADDIVVIERGRLHAVASDVNDPATTCTCALYGFQFQ
                     GAEENQLLQPHSCPVIAAGQGKEVIKTLFNELSVILPQSKNSQTSSLWDAFAYTLAIL
                     YYENFKNAYRSEQGYIKKDVLIKDILFYLSNNYREKITLEQLSKKFRASVSYICHEFT
                     KEYRISPINYVIQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPS
                     DYRRQFKNCFAEQEILSEFPQPVSLVG"
     gene            22781..23552
                     /locus_tag="JN001_001486"
                     /pseudo
     CDS             22781..23552
                     /locus_tag="JN001_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416212.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein"
     gene            23572..24510
                     /locus_tag="JN001_001487"
     CDS             23572..24510
                     /locus_tag="JN001_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit alpha"
                     /protein_id="HAY9052758.1"
                     /translation="MSQLNSVWVFSDNPERYAELFGGAQQWGQQVYAIVQNTDQAQAV
                     MPYGPKCIYVLEQNDALQRTENYAESIAAPLKDKHPAMLLLAATKRGKALAARLSVQL
                     NAALVNDATAVDIVDGHICAEHRMYGGLAFAQEKINSPLAIITLAPGVQEPCTSDTSH
                     QCPTETVPYVAPRHEILCRERRAKAASSVDLSKAKRVVGVGRGLAAQDDLKMVHELAA
                     VLNAEVGCSRPIAEGENWMERERYIGVSGVLLKSDLYLTLGISGQIQHMVGGNGAKVI
                     VAINKDKNAPIFNYADYGLVGDIYKVVPALISQLSR"
     gene            24566..25855
                     /locus_tag="JN001_001488"
     CDS             24566..25855
                     /locus_tag="JN001_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY9052759.1"
                     /translation="MSDDKFDAIVVGADVASSVAALVMARAGLDVLVIERGDSAGCKN
                     MTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLTEESAVTLDFHREQPDVPQHAS
                     YTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILQANVVVLAD
                     GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSD
                     GLMGGGFLYTNKDSISLGLVCGLGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEY
                     SAHMVPEGGLAMVPQMVNDGVMIVGDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAA
                     KEREDFSASSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYSRMVADIMNEMF
                     TIDGKPNQPVRKMIMGHAKKIGLINLLKDGIKGATAL"
     gene            25852..26145
                     /locus_tag="JN001_001489"
     CDS             25852..26145
                     /locus_tag="JN001_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY9052760.1"
                     /translation="MSQNATVNVDIKLGVNKFHVDEGHPHIILAANPDINEFRKLMKA
                     CPAGLYKQDDAGNIHFDSAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG"
     gene            26148..>27675
                     /gene="fadK"
                     /locus_tag="JN001_001490"
     CDS             26148..>27675
                     /gene="fadK"
                     /locus_tag="JN001_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416216.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="medium-chain fatty-acid--CoA ligase"
                     /protein_id="HAY9052761.1"
                     /translation="MHPTGPHLGPDVLFRESKMKVTLTFNEQRRAAYRQQGLWGDASL
                     ADYWQQTARAMPDKIAVVDNHGATYTYSALDHAASCLANWMLAKGIESGDRIAFQLPG
                     WCEFTVIYLACLKIGAVSVPLLPSWREAELVSVLNKCQAKMFFAPTLFKQTRPVDLIL
                     PLQNQLPQLQQIVGVDKLAPATSSLSLSPIIADNTSLTTAITTHGDELAAVLFTSGTE
                     GLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLHGVTAPFLIGARS
                     VLLDIFTPDACLALLEQQRCTCMLGATPFVYDLLNVLEKQPADLSALRFFLCGGTTIP
                     KKVARECQQRGIKLLSVYGSTESSPHAVVNLDDPLSRFMHTDGYAAAGVEIKVVDDAR
                     KTLPPGCEGEEASRGPNVFMGYFDEPELTARALDEEGWYCSGDLCRMDEAGYIKITGR
                     KKDIIVRGGENISSREVEDILLQHPKIHDACVVAMPDERLGERSCAYVVLKAPHHSLS
                     L"
BASE COUNT         6904 a         7002 c         6803 g         6966 t
ORIGIN      
        1 actgatattt attatcattt gaaataaatt taacttaagc gacaattatt tgtgacgttc
       61 attgcagaaa ataaaaataa tattatcgtt ataaattaaa atacataccg caattcgtat
      121 aatttcagca gttgttattt agaatgatta actggaccgc aactgaagca agaatatcag
      181 gatgaagctt accgcctcat cctgaatggt cattttacca gtgcgttaat gacggtttcc
      241 atcgcctgct tatccagctc actgcgctga atgcgtttat tggctaatgc tgtacgtaat
      301 acgcctgcga taacaatatg ctttggttcc tgccccagat cgcgcatttc cagcacaact
      361 ttaccgacaa ctctgcacat ttctcggtac agttcatcct cttttgtccg atttcccatt
      421 ctttatacct atttatcatg ccaactatca gcatatatca atctaaccaa ttaaacaaaa
      481 atcaaacaaa atcagacaaa taacgcgata aattatttta actgtagcaa ttgagcgatg
      541 atatatttat acaccggatg aactttcact tatcctcaca ctgacaactt tggcaccaga
      601 cgttgcgcaa acagcgaagt ttttgcgtaa ccttttccct ggaacgttaa atctttgata
      661 acaatttatt gtctaacaag ttgtatattt tttgaaacgc tgtttttgtt ttccttttgg
      721 attaatttca gcgtataatg cgcgccaatt gactcttgaa tggtttcagc actttggact
      781 gtagaactca acgactcaaa aacaggcact cacgttgggc tgagacacaa gcacacattc
      841 ctctgcacgc tttttcgatg tcacttatcc ttagagcgag gcaccaccac tttcgtaata
      901 ccggattcgc tttccggcag tgcgcccaga aagcaagttt ctcccatcct tctcaactta
      961 aagactaaga ctgtcatgaa aaagaccaaa attgtttgca ccatcggacc gaaaaccgaa
     1021 tctgaagaga tgttagctaa aatgctggac gctggcatga acgttatgcg tctgaacttc
     1081 tctcatggtg actatgcaga acacggtcag cgcattcaga atctgcgcaa cgtgatgagc
     1141 aaaactggta aaaccgccgc tatcctgctt gataccaaag gtccggaaat ccgcaccatg
     1201 aaactggaag gcggtaacga cgtttctctg aaagctggtc agacctttac tttcaccact
     1261 gataaatctg ttatcggcaa cagcgaaatg gttgcggtaa cgtatgaagg tttcactact
     1321 gacctgtcag ttggcaacac cgtactggtt gacgatggtc tgatcggtat ggaagttacc
     1381 gccattgaag gtaacaaagt tatctgtaaa gtgctgaaca acggtgacct gggcgaaaac
     1441 aaaggtgtga acctgcctgg cgtttccatt gctctgccag cactggctga aaaagacaaa
     1501 caggacctga tctttggttg cgaacaaggc gtagactttg ttgctgcttc ctttattcgt
     1561 aagcgttctg acgttatcga aatccgtgag cacctgaaag cgcacggcgg cgaaaacatc
     1621 cacatcatct ccaaaatcga aaaccaggaa ggcctcaaca acttcgacga aatcctcgaa
     1681 gcctctgacg gcatcatggt tgcgcgtggc gacctgggtg tagaaatccc ggtagaagaa
     1741 gttatcttcg cccagaagat gatgatcgaa aaatgtatcc gtgcacgtaa agtcgttatc
     1801 actgcgaccc agatgctgga ttccatgatc aaaaacccac gcccgactcg cgcagaagcc
     1861 ggtgacgttg caaacgccat cctcgacggt actgatgcag tgatgctgtc tggtgaatcc
     1921 gcaaaaggta aatacccgct ggaagcggtt tctatcatgg cgaccatctg cgaacgtacc
     1981 gaccgcgtga tgaacagccg tctcgagttc aacaatgaca accgtaaact gcgcattacc
     2041 gaagcggtat gccgtggtgc cgttgaaact gctgaaaaac tggatgctcc gctgatcgtg
     2101 gttgctactc agggcggtaa atctgctcgc gcagtacgta aatacttccc ggatgccacc
     2161 atcctggcac tgaccaccaa cgaaaaaacg gctcatcagt tggtactgag caaaggcgtt
     2221 gtgccgcagc tggttaaaga gatcacttct actgatgatt tctaccgtct gggtaaagaa
     2281 ctggctctgc agagcggtct ggcacacaaa ggtgacgttg tagttatggt ttctggtgca
     2341 ctggtaccga gcggcactac taacaccgca tctgttcacg tcctgtaata ttgcttttgt
     2401 gaattaattt gtatatcgaa gcgccctgat gggcgctttt tttatttaat cgataaccag
     2461 aagcaataaa aaatcaaatc ggatttcact atataatctc actttatcta agatgaatcc
     2521 gatggaagca tcctgttttc tctcaatttt tttatctaaa acccagcgtt cgatgcttct
     2581 ttgagcgaac gatcaaaaat aagtgccttc ccatcaaaaa aatattctca acataaaaaa
     2641 ctttgtgtaa tacttgtaac gctacatgga gattaactca atctagaggg tattaataat
     2701 gaaagctact aaactggtac tgggcgcggt aatcctgggt tctactctgc tggcaggttg
     2761 ctccagcaac gctaaaatcg atcagctgtc ttctgacgtt cagactctga acgctaaagt
     2821 tgaccagctg agcaacgacg tgaacgcaat gcgttccgac gttcaggctg ctaaagatga
     2881 cgcagctcgt gctaaccagc gtctggacaa catggctact aaataccgca agtaatagta
     2941 cctgtgaagt gaaaaatggc gcacattgtg cgccattttt tttgtctgct atttaccact
     3001 actgcctcgc gcgtaacata ttcccttgct ctggttcacc attctgcgct gactctactg
     3061 aaggcgcatt gctggctgcg ggagttgctc cactgctcac cgaaaccgga taccctgccc
     3121 gacgatacaa cgctttatcg actaacttct gatctacagc cttattgtct ttaaattgcg
     3181 taaagcctgc tggcagtgtg tatggcattg tctgaacgtt ctgctgttct tctgccgata
     3241 gtggtcgatg tacttcaaca taacgcatcc cgttaggctc cacggaatat ttcaccggtt
     3301 cgttgatcac tttcaccggc gttcccgtcc gcacgctgga gaataaggct ttaatatccg
     3361 gtgcattcat gcgaatacag cccgaactga cgcgtaaacc gacgctgtcc ggcgcactgg
     3421 taccatgaat gaggtattcg ccattaccat gcgcgaagcg cagtgcgtaa cgtcctagcg
     3481 ggttatttgg tccggcagga acgactggca gtaatttaat gccacgctcc agcgaacgtt
     3541 gacgaatgcc tgccgtaggc gtccaggttg gattagggat tttctgcccc acacgcgttt
     3601 ccatcaccgg cgtttccagc ccctgcaagc caatacctat cggataaacc tgcacgatat
     3661 tttctcccgg cggataataa taaaggcgca gctctgcaag gttaacgata atcccctgac
     3721 gcggtgcatc aggtaataac agttgtgaag gaatagttat cgtcgtacca ggttttggca
     3781 ccggggcgat agtgttattg gcttcaagga tcaacattgc cgcagtatca aaacgtcggg
     3841 caatagcctg aaggttttta tccccttctt gcaccgtata cgtttgattt tgcccaacca
     3901 gtcggcttcc ggttggtggt agcggataat caaccgccca ggcagcctgg atggcgctaa
     3961 aagcgccgat aagcgtgagt gtaagcaaag acgcgcgttt cattgtaaac ctcctgtatt
     4021 tgccggagac tcacgctgaa acgtcggatg gcgcttatgt tcacctgaaa ccaaaacact
     4081 cctgtgcagg tcagtgtaaa cattgaccat ccggcaatgt gagccaaccg gatgaaagct
     4141 gtccctttag tttagctaag tgcagcggct ttggcgcgaa ttgcgcgaat catcgcttcc
     4201 agaccttgtg aacgagatgg ggtgagatgt tgggtgagcg ccattttttc aaaccacgga
     4261 cgcacatcga aattgacaat atcctgcggc gtcatctgat cgtagagaat aaatacgacc
     4321 gcaataagcc ctttcacaat cgccgcatcg ctgtcgccct gcaattcaat aattccctgc
     4381 gcattctggc gcatgacaat ccacacctga ttctggcagc cctgaatgct attttgtggg
     4441 cttcggtctt cgtcgcgtaa ttctggcaga cgctggccca gctcaataat gtagagatat
     4501 ttctcttccc agttggcgca gcgtaaaaaa ttacgcagca atttttcttt atccggcaat
     4561 aaagccatag tgcctccctg ttatcccagc agacggtgaa tacgttgcag gccggtcacc
     4621 agacgatcca cttcttcatg agtgttatac atggccagcg acgcccgaca catcgcaggg
     4681 acgttgtaat aggccattaa tggcatagcg cagtgatgtc cggtacgcac agcaatgccg
     4741 taattatcga gaaaactgcc aacatcatag gcgtggtgtt taccgagatt aaaagcaata
     4801 acgccaagcc tgttttgtgg gccatagaga gtgagattcg gtacagattc cagctgtgat
     4861 agcgcgtaat gcatcagatt cagttcatac tcggctatgt tattaagccc cagcaccgaa
     4921 acatattcca gcgccgcgcc aagaccaatg atgcccccgg tattgggtgt accggcttca
     4981 aaccgccatg gtgctttggt ccaggtagtg ccttcactca ggctgacggt ggcgatcata
     5041 gaaccgcccc cttcccacgg cggcatctcc tgcaacaagg cttctttgac ataaagaatg
     5101 ccaatcccgg tggggccata cagtttatgc ccggaaaaca cgtaaaaatc gcaatccagc
     5161 gcctgaacat ccaccggatg atgcatcacc gcctgagcgc catccaccag cacttttgcg
     5221 ccatgctggt gcgcaagcgt gatcattccc gccagtggat tttctgtgcc aagcacgttg
     5281 gagacatgag taattgccag caggcgagtt ttctcatcaa acagcgtatg cagcgtctcc
     5341 agttgcagcg taccgtcggg gttgagaggg atcacacgca gctctgcgcc aacgcgtgcg
     5401 caaagcatct gccaggggac aatgttagcg tggtgctcca tctgactgat gatgatgtta
     5461 tcgcccgccc gcacattgct gttgccccag ctattggcga ccagattgat cccttccgtc
     5521 gtgccgcgga cgaacaccag ctcttccgcc gaacgggcat taataaacag cgatgcccgc
     5581 ttgcgcacgt tctccatttt ctcggtcgcc tgggcgctta aggtatgaat accgcgatgc
     5641 accgccgcgt agccatgacg ataaaactcg gcctcggcgt caatcacctg gctcggtttc
     5701 tgtgcactgg cggcgctgtc gagataagcc agcggcaaac cgtttacctc acgcgaaagc
     5761 accggaaagt cggcccgcac tttgtcgacg gaaaaagtca tcttgcacct cctggcagcc
     5821 gttgaccgat tcgggccagc acctgctgtt taagcccctc atcacgcagt gcttccgtca
     5881 gttcggcagc aaaggcgtaa atgatcatct gctgggcatc ctgctgattg atcccgcgcg
     5941 agcgcagata gaacatctgt tcatcatcaa tacgccccac cgtcgcgccg tggctgcatt
     6001 tcacatcatc tgcatagatt tccagctgcg gtttcgtatc cacttccgcc agtttgccca
     6061 tcagcagatt attgttggtc atctgaccat ccgttttgat ggcgtgctgc gcgacgttga
     6121 tcaaaccgtt aaataccgcg cggcctttgt cgctgacgat agttttgtgc aactgtcggc
     6181 tgttacaaaa acctttattg tgttccagcc aggtacgggt atcacacacc tcgtttttca
     6241 ccggcatcgc caggctattg atccgcagcg tgctgttttc gccattgagt tgcgtactgg
     6301 tgttgtgtcg taacactgcg ccacccagca ggaaactatg gctaaatgcg gtggcatcct
     6361 cagccagcaa caaatcgtta tgagcaaagt ggtgactgag cgggttttca aacgccagct
     6421 tgatatgctg caagtgggcg ttcgctgcga cattgatagt gaaccgtgcc ccggtaaaat
     6481 gacgagcatc attaaggctg acaaaatgtt cgatcaccgt tgcttcggca ccttccgcca
     6541 gatccagatg atgccggtaa tgggcagtgt tcacctcttc acctgccacg ccctgggtga
     6601 tatacattaa cagcaatggc tttgccggcc gttgaccgcg cttcacggcg atatgcgtca
     6661 cgctttgtgc caggctttcc gtcaaatgca gaaacacttc cgcctgaata gcgtcgggta
     6721 acccctgacg gtcgtcgtta atgctcactt catatccgct gccttcaatt gcatcgctca
     6781 gcgcgggcac gtaacgtcca tcgacaaaca ccagccgcac ggcgtctaac gttaacgcta
     6841 aggcatcacg ctgctgtggg gatatctccc ccgcaatgct gacaaactgg ctattggtca
     6901 gcccttccag cgacgtatat ttccagtttt catgtttacg tgtcggcagt ccggtacgca
     6961 gcaattgttg taaatgctgc tgtgcttgcg gggagcgttt tgtcccttca gcttcaaaca
     7021 agtgatgcca ctgttgcagc gcgttactgc tgttcggtaa gccagccata accctgctcc
     7081 tccagttgtt tgaccaacgt gaaatcgccg gatttcacaa ttcgtccctg atatagcaca
     7141 tggacgtaat caggcttgat gtagtcgaga atgcgttggt agtgcgtaac aatgatgaat
     7201 gagcgcttgc catcacgcag ggagttcacg ccatcggcga ccacttttaa tgcgtcaata
     7261 tccagcccgg agtccgactc atcaagaatg cataactccg gttccagcac cgccatttgc
     7321 aaaatatcgt tgcgcttttt ctcgccgccg gaaaaaccaa cgtttaccga acgggttaat
     7381 aaatcttccg gcatcttcag gagagcgatt ttctcttcca tcaaatcctg aaaatcaaag
     7441 cggtcgagcg tttcctggcc gcgatagctg cgcactgcat taagtgccgt ttgcaggaaa
     7501 aactggttac tgacgcctgg aatctccacc ggatactgga aggccataaa gatgccttcg
     7561 cctgcacgat cttccggcga cagtgcaagc aaatctttgc ctttgaactc aaccgtgccg
     7621 cccgtcactt cataatcttc gcgcccggca agcgttgccg ataaggtact tttgcccgaa
     7681 ccgtttggcc ccataatggc gtgaacttcg ccgggacgaa cggcgaggct taatccacgc
     7741 aggatagctt tatcttccac gctgacgtgt aaatctttaa tacttaacat gtttattcct
     7801 tatccgacgc tgtgttcaag actgatcgcg aggagttttt gtgcttcaac ggcaaattcc
     7861 agcggcagtt ctgagaacac gtctttgcag aaaccgttaa caatcatcga gatggcgtct
     7921 tcttcgctga tcccgcgttg caggcagtaa aacagttgat cttcaccaat acgtgatgtc
     7981 gttgcctcgt gctccagttg tgcgctgtta ttgcgacatt cgacatacgg gaaggtatgc
     8041 gccccacaat tagcgccaat cagcattgag tcgcactgag tgaaattgcg cgcattggtt
     8101 gccgtcggca tgattttcac taagccgcga taactgttct gactatgtcc ggcagagatc
     8161 cctttcgaga taatggtcga tttggtgttt ttaccgatgt ggatcatctt ggtgccggta
     8221 tccgcttgct gatgaccgct ggtcagcgcc actgagtaaa actcaccaat ggagttatcg
     8281 ccgcgcaaaa tgcagctggg atatttccac gtaatcgcgg acccggtttc tgattgcgtc
     8341 catgacattt tgctgttttc gccttcgcac aaagcacgct tggtgacgaa gttgagaata
     8401 ccgccggtgt tgttatcgcc agggaaccag ttttgtaccg tggaatattt cacctcggcg
     8461 tttttatgga tgatgacttc caccactgcc gcgtgtaact gatagctgtc acgcaccgga
     8521 gcggaacagc cttcaatgta gctgacgtag ctgtcttcgt cggccaccag aatggtgcgc
     8581 tcaaactgcc cggttttttc cgcgttaatg cgaaaatagg tggaaagttc catcgggcag
     8641 cgcacgcctt taggcacata aataaacgta ccgtcagagg ctaccgccgc attaagcgcg
     8701 gcaaagaagt tgtcattccc cggcaccacg gtgccgagat atttacgcac cagttccggg
     8761 tgatcgtgga tcgcctcacc aaaggaacag aaaataattc cctgctccgc cagtttttcg
     8821 cgataagtag tggcaaccga aacagagtcg aaaatggcat ccaccgccac ctctttgcct
     8881 tcccgcacgg gaacgcccaa ctgctcaaac gccgcctcca cctctttact taaaaaggcg
     8941 ttcgcgccag tttgctgcac cgcgccaggt tcagacgcgc aagtgtcgtc acaattaccg
     9001 cacgatggtg ctgagtagta gctgtaatcc tgataattca gcttgtcgta gtgcgctttc
     9061 aaccagtgcg gttcttccat ctccagccat gcgcgatagg cgtttagacg aaactccagc
     9121 atccactccg gctcattacg cttcgccgaa attgcgcgca ccacctcttc gtttatcccc
     9181 tttgccagct catcggtggc taactgggtg aagaatcctt ctttataatt cagcgggccg
     9241 ccggtccagg ttttgacatc gtcagttgct tcagtattac gagacatagt accgcctata
     9301 ccccaaagct ttcgccacag ccacattcat tctgggcttt agggttgtga aatttgaata
     9361 tctgattaag tccttcacga acgaaatcga cttccgtgcc atcaataaac ggcatcgctt
     9421 gcagcgggac aaacagcttc gcgccgtcgt gttcaaacag cagatcgtct ttgtccggct
     9481 cgctaacact gtcgagcaca tagccaaagc ccgcgcagcc cgtttgcttc acgcctaaac
     9541 gcacgccgac catacccggc tgctttgcca ccagctcacg gatgtgtatc gccgctgcgg
     9601 gtgtcagcgt taagccttgc caggcgaaat cttgtgggtt aaaggttcct gaatgcatgt
     9661 ccatcgattt acctcacttc atcgctttca gcgtataaca gcatgttggt gataatgatt
     9721 atcagttcaa cccagcaaac gcaggggctt taccgtaaaa catgcttttt gcctgctttt
     9781 aataagcata gaccctgatg tgtgggttaa caggcacgct aagaattagc gtatctcatt
     9841 gttagataat ggttattatc taaggagcat taaggctgtg atgaaaaaga aaaagttgta
     9901 ttaaaatgac tatttaagag ataggtaaaa aagtgcagcg ttcagaaata agaaaaccct
     9961 taagtctgtg cgacacaggc ttaagggttt ctaccccatc cggcgcttat ctccggcact
    10021 ctcagtggct tagctcttga aggggcgata agaataatct cataaagcta acccgccgtt
    10081 ttaacacaaa ctgcgattag tattattttt gaacaatatc aggcggtaga taagcagtat
    10141 taagaaggtc atcgaacctg gacggaggtt aatccaggtc gatttggcga acttgcggca
    10201 ttaagtcagg atcaatgcac gcccagacgc caggcaaagt agatttcttc ttttaattca
    10261 gcagaagaga gagtaagcag gtcagcaaat tcaagttcta gttgtttcag acgtttgaga
    10321 tattgggcag gtgaaagatt gctctggtca cggcgtaaaa attcaatggc cagctgggtg
    10381 ggatcaagtt gagtagacat agcatcctcg cttttagaca agacgtgtac agtataccac
    10441 cgtttactgt gcagataatg accaaaagca atatgcgtca cacttttctg gtgacaacgt
    10501 cacaaaatgg cggtcgtcaa tcgtgacgaa cagcacaaac gccctttctc atcgaagatt
    10561 tcaatctgcc agacctggtg acgcgaaccg agatgcaacg gtttacatat gccgcgcacc
    10621 cgcccttctc gtgccgagcg gacgtgatta gcattgattt ccagaccaac cactttttgc
    10681 tcaccttcgg tacataaata accggcaacg gaaccgatac tttcggccag taccacggat
    10741 gctcctccat gcagcaaccc gaaaggctgc tttgtccgcg agtctactgg cattgtcgct
    10801 tcaagggtgt catcaccaat atgttcaaag cgaatatcca ggaaccccac catgtttcct
    10861 tcacccatag cattcagtgc ttccagggtg attttccgtt tccatatcat ttaataatct
    10921 ccagtaaagc ctgcacagga tggcgtaccc ccgtgccttc aacccgtttt acctggctac
    10981 ggcaggaata tccggtcgcc agacagcggt tacgcggcag tcgctgcata gcctgatgcc
    11041 aggataactc atagatcccg agcgaatttt catggttttt cgcttcatgt ccgtaagtcc
    11101 ctgccatgcc gcagcaaccc acgctgacat tttccagttt cgcgccaaaa cgggcaaata
    11161 tcgcggccca ttgtgctggc gcacccggca aggcggtaac ttcggtacag tgaccaaaga
    11221 aataccatga ttcaccgctg actgtagcca caggctgtga ctcaagtgcg cttgccagcc
    11281 attcattcgc cagtaagacg ttaaactcgc cacgctcctc gcccagcgcc agtttatatt
    11341 catcgcgata acaaagtacc agcgccggat cgacgcccac cattggcata cccagcttcg
    11401 ccatacggtt gaggaaatcc gccgtctttt tcgccgtctt cgcaaaacga ttaagaaaac
    11461 ctttaatatg ctgggctttg ccatttggcg aaaatggcag taacacaggc tggaaaccta
    11521 atttttcgac cagacggaca aaatccgcca ccacttgcgc atcgtaatag ctggtaaagg
    11581 ggtcctgcac caccaacact gtgcgcgctt tctgctctgc attgagagat tcaagctgtt
    11641 ccagcgtcat gtttgccgag cgatgcccca ccatttgttg ttgtagcgag gggaccgaca
    11701 gcagcggcaa atcaaccatg ccgatatgtt tttccgagag tttgcgcacc agcggctggt
    11761 taatgaagaa gttaaaggtt ttcggcgcgc gtgccatcag cggcgcgtag ctctcgaccg
    11821 tagcgacgag gtggtcgcgc agcgggcgta aataacgggt gtgatagagc tgcagaaaac
    11881 gagagcgaaa ctccggcaca tcaattttga tggggcacag ggtcgaacac gctttacagg
    11941 ccagacagcc cgacatcgcc tctttgactt cgtgtgagaa gtcatattcg cctttattcg
    12001 catgccagct attgcgcgtg cgggcaatta acgtccgcaa actgacgccg gattcaggca
    12061 gttcttgttc cagtttgagt ggatcaacgc cgcgatccgc caacaaacgc agccattcac
    12121 gcaccagcgt tgcgcgccct ttcggtgaat gaatccggtt ctgggtgatc ttcatcgacg
    12181 gacacatcgg actacgggca tcaaagttga agcataaacc gttgccgtta cactccatcg
    12241 caccgcgcca ctgctggcgt accgcaatgg ggatctgccg atcgaatgta ccgcgcttca
    12301 ccgcgtccac tttcatcatc ggcgcatcga gaccttctgg cgggcaaatc ttccctgggt
    12361 tgagtcggtt atgcgggtca aatgccgctt tcactttgcg cagttctgca aaaagttcct
    12421 caccgaaaaa cgccgggctg tattcagcgc gaaaaccttt gccgtgctcg ccccacaaca
    12481 aaccaccgta tttcgcagtc agcgccacca cgtcatcaga gatttgcttc atcaaaatct
    12541 cttgttgagg atcgcacata tccagctctg gacggacgtg caagacacct gcgtcgacgt
    12601 gaccgaacat accgtagctt aagccgtggc tgtcgagcag cgcgcgaaat tcagcaatat
    12661 aatccgccag gtgttccggc ggtacgcagg tatcctcagc aaacggaatt ggcttagcgg
    12721 cacctttggc attgccaagc agaccaacgg cttttttgcg cattgcatag atacgttcaa
    12781 cccccgccag ctcacggcac acctgccagc cgatgacacc tgcttgatga ctggcgatca
    12841 gctcatccaa ccgcgcacag agtgcattta cccgctcatc aatcagcgcc tcatcatcac
    12901 cagcaaattc cacaatgttc agcccgagca tctcttggtc aggcacatcg gtaatcaact
    12961 cgctgacgga atgccagaca atatcttccc gcgccagatt cagcactttt gagtccaccg
    13021 tctctaccga aagcgcccgc gcctcaacca taaacggcgc gttacgcagc gcagagtcaa
    13081 aagagtcata tttgacgttc accagacggc gcactttagg caagcgcgta atatccagcc
    13141 gcgcttcggt aataaaggcc agcgtccctt ctgaacccgt cagaatgcgc gtcaggtcga
    13201 actcggtcat ctcatcgtta aagacatgac gcagatcgta accggtaaga aagcggttaa
    13261 gtttggggaa gttgtcgata attaactggc gttgctgacg gcaacgttga taaaccgtgt
    13321 tataaattcg cccgattgtg gtattggatt tacccagcgt ttccgccaat tcgacgggta
    13381 aaggttgcgt atcgagaaca tcgcccccca acaacaccgc gcgtacgcca agtacgtgat
    13441 ctgacgtttt gccatagacc agcgatccct gaccggatgc atcggtattg atcatcccac
    13501 cgagcgttgc ccggttgctg gtcgaaagtt ccggcgcaaa aaagtagccg aacggtttca
    13561 ggtactgatt gagttgatct tttatcaccc cggcctcaac gcgcacccag ccctcttcag
    13621 ggttaatttc gatgatgcgg ttcatatggc gggacatatc aacaataatc ccctggttga
    13681 gcgcctgacc gttagtgccg gtgccgccgc cgcggggggt aaagatcagc gatgaatagc
    13741 gttcctgcgc ggcaagacgg gcgatcagcg ccacatctgc ggttgaacgc ggaaatacca
    13801 ccgcatcggg gagaagttgg taaatactgt tgtcggtcga cattgtcaga cgatcggcat
    13861 aacttgtcgc cgtatcgccg gtaaaacctt gttgctccag ctcttgcaaa aaattaagca
    13921 ccagttgaac gacgccgggt gcctgagaaa tctgtggaat cattatattg cccctttcct
    13981 gcggtctgtg atgtaggtcg atacactatt ctttcaggcg gctgcaatag cgcactgaaa
    14041 ggtgatgttt atttactcta tggatttcga gttgcaggaa ggcggcaagc gagtgaactc
    14101 caggagctta caatagtaag tgactggggt gaacgaacgt agccgcagca catgcaactt
    14161 gaaatacgac gagtaaatcg tttgcgtgtt gcctgagttg ttgtaccaca tttttttcta
    14221 acacgcccat cagaattaag ggcagaatcg gcctgttaaa aaccgctgaa attgctcatc
    14281 attatgcagg tgagtttcgc gtgttcacgt cgcgtcgacg atttgacgca caaaaaaggt
    14341 gaaaagtagt tatggtaaat gttcgtcagc ccagggatgt cgcacaaatt ctgctttcgg
    14401 tgctgttttt agccatcatg attgtggcat gtctgtggat tgttcaaccc tttattctcg
    14461 gctttgcatg ggccggtacg gtggttatcg ccacctggcc ggtattgtta cgtttgcaaa
    14521 agatcatgtt tggccgccgc tctctcgccg ttctggtgat gacgctgtta ttagtgatgg
    14581 tgtttatcat ccctattgct ttgctggtta acagtatcgt cgacggcagc ggcccgctaa
    14641 ttaaagccat ttccagcggc gacatgacgt tacccgatct ggcgtggctt aataccattc
    14701 cggtgattgg cgcgaagctg tatgcaggct ggcacaactt gctggatatg ggggggacgg
    14761 cgatcatggc gaaagtccgc ccttatattg gcaccaccac cacctggttc gttgggcagg
    14821 cggcgcatat cgggcgcttt atggtgcatt gtgcgctgat gcttctcttc agtgccctgc
    14881 tgtactggcg cggtgaacag gtggcacaag gcattcgcca ttttgcaacc cgtctggcag
    14941 gcgttcgcgg agatgccgcc gtactgctgg cggcacaggc tatccgcgcg gtggcgctgg
    15001 gtgtggtggt gacggcgtta gtacaggcag tgcttggcgg tatcggcctc gccgtatccg
    15061 gcgtacctta tgcaacgttg ctaacggtgt taatgatcct ctcctgcctt gtccagcttg
    15121 gcccgttgcc ggtactgatt ccggcgatta tctggctcta ctggactggc gataccacct
    15181 ggggaacggt attgttagtg tggagcggtg tggttggcac gctggataac gtcatccgcc
    15241 caatgttaat tcgcatgggt gccgatttac cgctgatcct gatcctctct ggtgttattg
    15301 gtggtttgat tgctttcggg atgatcggtc tgtttattgg tccggttctg ttagccgttt
    15361 cctggcgtct gtttgccgcg tgggtggaag aagtcccgcc gccgacggac caaccggaag
    15421 aaattctcga agaacttggc gaaatcgaga aaccgaataa gtaatttctc atcaggcggc
    15481 tctgccgcct gattgttaac ccccgctaat tgatatttgc ttgctcttcc ccatattttc
    15541 ctgcttaccg ccattcagct ggtagtacct gtcgcaaatt ctttacagtt tttaaactaa
    15601 tgagacgaat ctgatcgacg caaaaagtcc gtatgcctac tattagctca cggttataaa
    15661 tcaacatatt gatttataag catggaaatc ccctgagtga aacaacgaat tgctgtgtgt
    15721 agtctttgcc catctcccac gatgggcttt tttttaacat ttttccactt cgctacctcg
    15781 cccctcactc tttccaataa tgttgcacaa gatactgtga ctctcttcaa gccgtcagca
    15841 ggctgataat gttatttata ttttattgtt tatttcatgc agccattaca cgatgaacgc
    15901 ttatgaactc caggcactcc gacatatttt tgccatgact attgatgaat gcgcacctgg
    15961 attgcccaga ccggtgacag tgaaagctgg cgtcagtggg aaaatggcaa gtgtgccatt
    16021 cctgatcgtg tagtcgagca actgttggct atgcgtcagc aaagaaaaaa acatcttcat
    16081 gccatcatag agaaaataaa taaccgcatc ggcaacaaca ccatgcgttt tttccccgac
    16141 ttaaccgcat ttcaacgagt ctaccctgat ggcaatttta ttgactggaa gatctatcaa
    16201 tcggtagccg ctgaaggtaa tgctgttgaa aagcaaattc cccagccagt tggtggacgc
    16261 cagcgtagct aatgaattac cgcaaatgaa cagcaaaccg ttagtctggc tggaaggtgt
    16321 ttcatcggta ctgttcggtg tagccgcatt ctcgaccttt tatgtgattg tggtgtggat
    16381 gcccaaatat gcgatggctt ttgctggtat gtcagaagct gaggcattaa aaaccatctc
    16441 ttattacagt atgggctcgt tggtctgtgt ctttattttt gccgcactac tgaaaaaaat
    16501 ggtccggccc atctgggcta atgtatttaa ctctgcactg gcaacaataa cagcagccat
    16561 tatctatctg tacccttctc cactggtgtg taatgccggc gcctttgtta tcggtttctc
    16621 agcagctggc ggcattttac agctcggtgt ttcggtcatg tcagagtttt tcccaaaaag
    16681 caaagccaaa gtcaccagta tttatatgat gatgggtgga ctggctaact ttgttattcc
    16741 gctgattacc ggttatctgt cgaacatcgg ccttcaatat atcattgttc tcgattttac
    16801 tttcgcgctg ctggccctga ttaccgcaat tattgttttt atccgctatt accgcgtttt
    16861 tattattcct gagaatgatg tgcggtttgg cgagcgtaaa tttagcaccc ggttaaacac
    16921 aattaagcat agaggttaaa ggagttaatt atggatgtta ccgcaaaata cgaattgatt
    16981 gggctgatgg cctatcctat ccgccacagt ttatcgcctg aaatgcagaa taaagcctta
    17041 gaaaaagcgg gattgccatt tacctatatg gcctttgaag tggataacga tagttttccc
    17101 ggagcaattg aaggattaaa agctctaaaa atgcgcggaa ctggtgtatc aatgccgaac
    17161 aaacaactgg cttgttaata tgttgatgaa ttaacgccag cagccaaact ggtgggtgcc
    17221 atcaacacca tcgttaatga tgatggctac ctgcgcggct ataacaccga cggcacgggc
    17281 catattcgcg ccattaaaga gagcggtttt gatatcaaag gcaaaacaat ggtgctgtta
    17341 ggggccggag gtgcctcaac ggctattggc gcgcaggggg caattgaagg tttaaaagaa
    17401 attaaactct ttaaccgtcg ggatgagttc ttcgataaag ccctcgcctt cgcgcagcgg
    17461 gttaacgaaa acaccgattg tgtcgtcacg gttaccgatc tcgccgatca gcaagccttt
    17521 gctgaagccc tggcttccgc cgacatttta accaatggca caaaagtggg tatgaaaccc
    17581 cttgagaatg aatcattagt taatgatatc agtctgttac atccgggact tctggtcact
    17641 gaatgcgtgt ataacccgca tatgacgaag ttattgcagc aggcgcaaca agctggttgc
    17701 aaaacgattg atggatacgg catgttgttg tggcaagggg ctgaacagtt cacgttatgg
    17761 actggcaaag atttccctct ggaatatgtt aaacaggtca tggggttcgg tgcctgacag
    17821 gctgaccgcg tgcagaaagg gtaaaaaaat gaaaaccgta actgtaaaag atctcgtcat
    17881 tggtacgggc gcacctaaaa tcatcgtctc gctgatggcg aaagatatcg cccgcgtgaa
    17941 atccgaagct ctcgcctatc gtgaagcgga ctttgatatt ctggaatggc gtgtggacca
    18001 ctttgccgac ctctccaatg tggagtctgt catggcggcg gcaaaaattc tccgcgaaac
    18061 catgccagaa aaaccgctgc tgtttacctt ccgcagtgcc aaagaaggcg gcgagcaggc
    18121 gatttccacc gaggcttata ttgctctcaa tcgtgcagcc atcgacagcg gcctggttga
    18181 tatgatagat ctggagttat ttaccggcga tgatcaggtt aaagaaaccg tcgcctgcgc
    18241 ccacgcgcat gatgtgaaag ttgtcatgtc caaccatgac ttccataaaa cgccggaagc
    18301 cgaagaaatc attgcccgtc tgcgcaaaat gcagtccttc gacgccgata ttcctaagat
    18361 tgcgctgatg ccgcaaagta ccagcgatgt gctgacgttg cttgccgcga ccctggagat
    18421 gcaggagcag tatgccgatc gtccaatcat cacaatgtca atggcaaaaa ctggcgtaat
    18481 ttctcgtctg gctggtgaag tatttggctc ggcggcaact tttggtgcgg taaaaaaagc
    18541 ctctgcgcca gggcaaatct cggtaaatga tttacgcaca gtattaacta ttttacatca
    18601 ggcataagca ataatatttc ggcgggaata tcctcccccg ccgaactaaa aaaaatatat
    18661 tcaaccgtat ttaataaaaa tatttcgtga gtctctgtgc gctaaatatc catctggcgt
    18721 agggaaaatc acacctgaat cagaaattaa caatgaaacc tgtaaaacca cctcgtatta
    18781 atggacgagt gccggtcctg tcggcacagg aagcggtgaa ttatattccc gacgaagcaa
    18841 cactttgtgt gttaggcgct ggcggcggta ttctggaagc cacgacgtta attactgctc
    18901 ttgctgataa atataaacag actcaaacgc cacgtaattt atcgattatt agtccaacag
    18961 ggcttggcga tcgcgccgac cgtggtatta gtccgctggc gcaagaaggt ctggtgaaat
    19021 gggcattatg tggtcactgg ggacaatcgc cgcgtatttc tgaactcgca gaacaaaata
    19081 aaattattgc ttataactat ccacaaggtg tacttacaca aaccttacgc gccgccgcag
    19141 cccaccagcc tggtattatt agtgatattg gcatcgggac atttgtcgat ccacgccagc
    19201 aaggcggcaa actgaatgaa gtcacgaaag aagacctgat taaactggtc gagtttgata
    19261 acaaagaata tctctattac aaagcgattg cgccagatat cgccttcatt cgcgctacca
    19321 cctgcgacag tgaaggctac gccacttttg aagatgaggt gatgtatctc gacgcattgg
    19381 ttattgccca ggcggtgcac aataacggcg gtattgtgat gatgcaggtg cagaaaatgg
    19441 ttaagaaagc cacgctgcat cctaaatctg tccgtattcc gggttatctg gtggatattg
    19501 tggtggtcga tccggatcaa agccaactgt atggcggtgc gccggttaac cgctttattt
    19561 ctggtgactt cacccttgat gacagcacca aacttagcct gcccctaaac caacgtaaat
    19621 tagttgcgag gcgtgcatta ttcgaaatgc gtaaaggcgc ggtggggaat gtcggcgtcg
    19681 gtattgctga cggtattggc ctggtcgccc gggaagaagg ttgtgctgat gactttattc
    19741 tgacggtaga aacaggtccg attggcggaa ttacttcaca ggggatcgcc tttggcgcga
    19801 acgtgaatac ccgtgccatt ctggatatga cgtcccagtt taatttttat cacggtggtg
    19861 gtctggatgt ttgttatttg agttttgctg aagtcgacca gcacggtaac gtcggcgtgc
    19921 ataaattcaa tggcaaaatc atgggtaccg gtggatttat tgatatcagt gccacctcga
    19981 agaaaattat tttctgcggc acgttaaccg cgggcagttt aaaaacagaa attgccgatg
    20041 gcaaattaaa tatcgtccag gaaggacggg tgaagaaatt tattcaggaa ctaccggaaa
    20101 ttacttttag cggaaaaatc gcgctcgaac gggaactgga tgttcgttac atcaccgaac
    20161 gtgctgtatt cacgctgaaa gaagacggcc tgcatttaat cgaaatcgcc cctggcgtcg
    20221 atttacaaaa agatattctc gacaaaatgg atttcacccc agtgatttcg ccagaactca
    20281 aactgatgga cgaaagatta tttatcgatg cggcgatggg ttttgtcctg cctgaagcgg
    20341 ctcattaaca ggagtatcac gatggatttt tctttaactg aagaacaaga actgctgctg
    20401 gccagtattc gcgaactgat tacgactaac tttgcggaag agtatttccg cacctgcgat
    20461 caaaacggga catatccgcg tgagtttatg cgggcgctgg cggataacgg catttctatg
    20521 cttggcgtgc cggaagagtt cggtggcatc cctgcggatt acgtcaccca gatgctggcg
    20581 ctgatggaag tgtcaaaatg cggtgctccg gcatttttga ttaccaacgg tcaatgtatt
    20641 cacagtatgc gccgtttcgg ttctgcagag cagctacgta aaacggcaga gagcaccctg
    20701 gaaacgggtg atcccgccta tgccctggcg ttgacggagc caggcgcagg ctcagacaac
    20761 aacagtgcca ctaccactta cacgcgtaaa aacggcaagg tttacatcaa cggacagaaa
    20821 acctttatta ccggtgcgaa agagtacccg tatatgctgg tgttggcgcg cgatccgcaa
    20881 ccgaaagatc ccaaaaaagc cttcaccctg tggtgggtcg actccagtaa gcccggcatt
    20941 aagattaacc cgctgcataa aatcggctgg catatgctca gcacctgcga agtctatctc
    21001 gacaacgtgg aggttgaaga gagcgacatg gtgggcgaag aaggaatggg tttcctcaat
    21061 gtgatgtaca actttgagat ggagcgcctg atcaacgccg cgcgcagcac cggctttgcc
    21121 gaatgcgcct ttgaagatgc cgcccgctat gccaaccaac gtatcgcttt tggtaagccc
    21181 attggtcata accagatgat ccaggaaaaa ctggcgctga tggcgattaa gatcgacaac
    21241 atgcgcaaca tggtgctgaa agtggcatgg caagccgatc agcatcagtc actgcgcacc
    21301 agcgcggcgc tggcaaaact gtattgcgca cgtaccgcaa tggaagtcat tgatgatgcg
    21361 attcaaatca tgggcggtct gggctatacc gatgaagcgc gcgtctcccg cttctggcgt
    21421 gatgtccgtt gtgaacgtat cggcggcggt acagacgaaa ttatgattta cgtagcaggt
    21481 cggcagatcc tgaaagacta tcagaacaaa taatctgcag gcggcgcagc ttcttaacaa
    21541 actgcgccgc cagatttatc caacaagact taccggttga ggaaattcag ataggatttc
    21601 ttgttccgca aaacagtttt taaattgtct acggtaatcg ctgggcgaac aaccgacatg
    21661 gcgcaaaaac agtttggcaa agtgatcgac attttcataa cccacacgcc aggagatctc
    21721 tgcctgtgat aattcagtat tagtgagtga ccattttgct tccgtcatac gccgttgaat
    21781 aacatagtta ataggggaaa tacgatactc tttggtaaat tcatggcaaa tataactgac
    21841 gctggcacga aattttttcg ataactgttc taaagtgatt ttttcgcgat aattattact
    21901 cagatagaaa agaatatctt ttatcagaac atctttttta atatacccct gctccgaacg
    21961 ataagcattt ttaaaatttt cgtagtaaag aatggctaac gtataggcaa atgcatccca
    22021 taacgaagat gtttggctat ttttactttg cggcaaaatc acacttagct cattaaataa
    22081 ggtttttatg acttcttttc cctgccccgc ggcaattacc ggacaagaat gcggttgcag
    22141 tagctgattt tcctcagccc cctgaaactg aaagccgtac agcgcacagg tacacgtcgt
    22201 tgccggatcg ttaacgtcag aggccaccgc atgcagcctg ccgcgttcta tcaccacaat
    22261 gtcatccgca tgtgcgacat ataacgaaga atcgatggta aaccttgcaa cccctttctt
    22321 gacgtaaatc aactcggttt cattgtcatg aacgtgatgt ccggactccc attttggatc
    22381 atcgctaaat gcaaaacgtg aaagccgtgg cgttttaccg gcgacaaaca gcgtttcact
    22441 ggcgttatca aaacagcgtt gatacatgac aacctcccta ttccatgagc aagcaaaaac
    22501 aatatatgcc ggataaaata cggcgtgtat tgcggttata caaccgcgtt tagcgagagc
    22561 taaacaagat tatttacact gaatgcaaga ttgtacggtc atggaataac tatattgccg
    22621 caaattgcac ttttgtttta gcgatcgcat ttttttgcaa gattgttggc aaggaaaaca
    22681 gcttgctccg tcgaaaaccc ccaccgctat cgcacactat tttcaggcca tttttacctt
    22741 ccatcggaga tggttccgta tgcgactcac aggagaaatc atgaaaataa taacctgctt
    22801 taagctggtg cctgaagaac aggacattgt tgtcactcca gaatacaccc tgaatttcga
    22861 caatgccgac gccaaaatca gccagttcga tctcaatgcc attgaagctg caagccagct
    22921 cgcaacagat gacgatgaga tagccgcgct gaccgttggc ggctcattgt tgcagaactc
    22981 gaaagtgcgc agtgcgcaaa gatgtgctat cccgcgggcc gcacagcctg tatttggtgc
    23041 aggatgcgca acttgaacat gcactgcctc tcgataccgc aaaagcgctg gcggcagcaa
    23101 ttgaaaagat cggcttcgat ttactgatct ttggtgaagg ttccggcgac ctttatgccc
    23161 agcaggttgg cttgctggtc ggagaaattc tgcaacttcc ggtgattaat gcagtgagtg
    23221 ctattcagcg tcagggtaat acactggtga ttgaacgcac gcttgaagat gatgttgaag
    23281 ttattgaact ctctgttcca gccgtgctct gcgtcacctc cgatattaac gtgccacgca
    23341 ttccttcgat gaaagccatt ctcggcgcgg gtaaaaaacc ggtaaatcag tggcaggcaa
    23401 gtgatattga ctggagccag agcgcgccac ttgctgaact ggtcggcatt cgcgtaccgc
    23461 cgcaaacaga acgtaagcac atcattatcg ataacgattc gccggaggcc attgccgagc
    23521 tggcggaaca tctgaagaaa gccctgaact gaagcctacg gagaagaaac gatgagtcaa
    23581 ttaaacagcg tctgggtctt tagcgataat cctgaacgtt atgctgaact gtttggcggc
    23641 gctcagcaat ggggccaaca ggtgtatgcc attgtacaaa ataccgacca ggcgcaggca
    23701 gttatgcctt atggtccaaa atgtatttat gttcttgagc aaaacgacgc gctgcaacgc
    23761 actgaaaatt acgccgaaag cattgctgcc ccgctgaaag ataaacaccc cgctatgttg
    23821 ctgttggccg cgacgaaacg tggtaaagct ctggcagcac ggttaagtgt gcaactgaat
    23881 gcggcgctgg tgaacgatgc cacggcggtg gatattgtcg atggtcacat ttgcgccgaa
    23941 caccggatgt atggcgggtt agcgttcgct caggaaaaga tcaacagccc gctggcgatc
    24001 attacccttg cacccggtgt tcaggaaccg tgcaccagtg atacctctca tcagtgcccg
    24061 acagaaacgg taccttatgt tgctccgcgt catgaaattc tctgtcgcga acgccgtgcg
    24121 aaagccgcaa gcagcgtgga cctgagcaaa gcaaaacgtg tggttggcgt cggtcgtggt
    24181 ctggcggcgc aggatgacct gaaaatggtc cacgaactgg cggcggtgct gaatgctgaa
    24241 gtcggctgtt cacgtccaat tgccgaaggc gagaactgga tggagcgtga acgttatatc
    24301 ggtgtctccg gcgtgttgct gaaatccgat ctctacctga cgctggggat ctccgggcag
    24361 atccagcata tggttggcgg caacggcgca aaagtgattg tcgccatcaa taaagataaa
    24421 aatgcgccaa tcttcaatta tgccgactac ggtctggtgg gcgatatcta caaagtcgtc
    24481 cctgccctga ttagccagtt gagccgctaa ttcccctttc aaccacatct cccgctgtaa
    24541 acgcagcggg aagggagcat aacgcatgtc ggatgacaaa tttgatgcca ttgtggtcgg
    24601 tgcggacgtt gctagtagcg ttgccgcact ggtcatggcg cgagccggac tggatgtcct
    24661 ggtgatagaa cgcggcgaca gtgccggatg taaaaacatg accggcgggc gtctttatgc
    24721 ccacacactt gaagcaatca ttccaggctt tgcagtatca gcgccggtag aacgcaaggt
    24781 cacacgcgag aaaatctcct tcttaaccga agaaagcgcc gttaccctcg attttcaccg
    24841 cgagcaacca gatgttccgc aacacgcatc ttataccgta ttgcgtaatc gtctggaccc
    24901 gtggttgatg gaacaagccg agcaggcggg cgcacagttt atcccgggcg ttcgcgtcga
    24961 tgcgttggtt cgtgaaggaa acaaggtcac tggcgtgcag gccggggatg atattctcca
    25021 agcgaatgtg gtggttctag ctgatggcgt aaactcgatg cttggccgct cgctgggaat
    25081 ggttcccgct tccgatccgc atcattacgc tgttggtgtt aaagaggtta ttggcctcac
    25141 accagaacag atcaacgatc gctttaatat tacgggcgag gaaggtgccg cctggctgtt
    25201 tgccggctcc ccttctgacg gcctgatggg cgggggattt ctctatacca acaaggattc
    25261 catatccttg gggctggttt gtggattggg tgatatcgcc catgcgcaaa aaagcgtgcc
    25321 gcaaatgctg gaagatttta aacaacaccc cgccattcgc ccactaatta gcggcggcaa
    25381 actgcttgaa tattccgcgc atatggtgcc agaaggcggt ctggcaatgg tgccgcagat
    25441 ggttaacgat ggcgtgatga tcgttggtga cgccgcaggc ttctgcctga atttgggttt
    25501 tacagttcgt ggcatggatt tagccattgc atcggctcag gctgccgcca caacggtgat
    25561 cgccgccaaa gaacgcgagg atttctccgc cagcagtctg gcgcaataca aacgtgagct
    25621 ggaacaaagc tgcgtcatgc gcgatatgca gcatttccgc aagatcccgg cgctgatgga
    25681 aaacccgcgc ctgtttagcc aatactcacg aatggtcgcc gacatcatga acgagatgtt
    25741 caccattgac ggcaaaccaa accagccggt acgcaaaatg atcatgggac acgcgaagaa
    25801 aattgggctg atcaacttgc tgaaagatgg cattaaggga gcaaccgcgc tatgagccag
    25861 aacgctacgg ttaacgtcga catcaaatta ggcgtcaata aattccatgt tgatgagggc
    25921 cacccgcata tcattctggc ggcaaatccc gatatcaatg aattccgtaa attaatgaaa
    25981 gcttgccctg ccggacttta taagcaggat gacgccggca acattcattt cgattccgcc
    26041 ggttgtctgg agtgcggcac ctgtcgggtg ctgtgcggca acactattct cgaacagtgg
    26101 caatatcccg caggcacctt cggtattgat tttcgctacg gctaatcatg catcccacag
    26161 gcccgcatct cgggcctgat gttctgtttc gagagtccaa aatgaaagtg acattaacgt
    26221 tcaacgaaca acgtcgtgcg gcgtatcgtc agcaagggtt atggggcgat gcttcactgg
    26281 ccgattactg gcagcagacc gctcgtgcga tgccagacaa aattgccgtg gtcgacaatc
    26341 atggtgcaac gtacacctat agcgcgctcg atcacgccgc gagctgtctg gcaaactgga
    26401 tgttagcgaa gggtattgaa tcaggcgatc gcatcgcatt tcaactgcct ggctggtgtg
    26461 aatttaccgt tatctatctt gcctgcctga aaatcggtgc ggtttccgtg ccgctgttgc
    26521 cttcctggcg ggaagcagaa ctggtgtcgg tgctcaataa gtgtcaggca aaaatgttct
    26581 ttgcaccgac gttgtttaaa caaacacgtc cggtagattt aatcctgccg ctgcaaaatc
    26641 agcttccaca actacaacaa attgtcggcg tggacaaact ggctcccgcc acctcttccc
    26701 tctcattaag tccgattatc gccgacaata cctcactgac cacggcgata acgacccacg
    26761 gcgatgaatt agctgcggtg ctgtttacct ccggaaccga gggtctgcca aagggcgtga
    26821 tgctaacgca taacaatatt ctcgccagtg agcgggctta ttgcgcgcga ctgaatctga
    26881 cctggcagga tgtctttatg atgcctgcgc cacttggtca cgcaacgggc tttctgcatg
    26941 gcgtaacggc accattctta attggcgctc gcagcgtgtt gttagatatt ttcactcctg
    27001 atgcgtgtct cgcgctgctt gagcagcagc gttgcacctg tatgctaggc gcaacgccgt
    27061 ttgtctatga tcttttgaat gtactagaga aacaacccgc ggacctttca gcgctgcgtt
    27121 tctttctttg cggcggtacc acaatcccca aaaaagtggc acgtgaatgc cagcagcgcg
    27181 gcattaaatt attaagtgtt tatggttcca cagaaagttc gccgcatgcg gtggtgaatc
    27241 tcgatgatcc tttgtcgcgc tttatgcaca ccgatggtta cgctgccgca ggtgtagaga
    27301 ttaaagtggt cgatgacgca cgcaagacct taccgccagg ttgcgaaggt gaagaagcct
    27361 cgcgtggccc caatgtgttt atggggtatt ttgatgaacc tgaattaacc gcccgtgcgc
    27421 tggacgaaga aggctggtat tgcagcggcg atctctgccg tatggatgag gctggctata
    27481 taaaaattac cggacgcaaa aaagatatta ttgtccgcgg cggcgaaaat attagcagcc
    27541 gtgaagtgga agatatttta ttgcagcatc ctaaaattca cgatgcctgt gtggttgcaa
    27601 tgcccgatga acgtttaggt gaacgatcat gcgcttatgt cgtgctgaaa gcgccgcatc
    27661 attcattatc gctgg
//
LOCUS       DADMJE010000038        27618 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.039, whole genome shotgun sequence.
ACCESSION   DADMJE010000038 DADMJE010000000
VERSION     DADMJE010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27618
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.039"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(174..704)
                     /gene="ppa"
                     /locus_tag="JN001_001491"
     CDS             complement(174..704)
                     /gene="ppa"
                     /locus_tag="JN001_001491"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001739810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic diphosphatase"
                     /protein_id="HAY9052762.1"
                     /translation="MSLLNVPAGKDLPEDIYVVIEIPANADPIKYEIDKESGALFVDR
                     FMSTAMFYPCNYGYINHTLSLDGDPVDVLVPTPYPLQPGSVIRCRPVGVLKMTDEAGE
                     DAKLVAVPHSKLSKEYDHIKDVNDLPELLKAQIAHFFEHYKDLEKGKWVKVEGWENAE
                     AAKAEIVASFERAKNK"
     gene            1014..1970
                     /gene="ytfQ"
                     /locus_tag="JN001_001492"
     CDS             1014..1970
                     /gene="ytfQ"
                     /locus_tag="JN001_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactofuranose ABC transporter
                     substrate-binding protein YtfQ"
                     /protein_id="HAY9052763.1"
                     /translation="MWKRLLVVSAVSAAMSSMALAAPLTVGFSQVGSESGWRAAETNV
                     AKSEAEKRGITLKIADGQQKQENRIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKD
                     AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVNGKPCNVVELQGTVG
                     ASVAIDRKKGFAEAIKNAPNIKIIRSQSGDFTRSKGKEVMESFIKAENNGKNICMVYA
                     HNDDMVIGAIQAIKEAGLKPGKDILTGSIDGVPDIYKAMIDGEANASVELTPNMAGPA
                     FDALEKYKKDGTMPEKLTLTKSTLYLPDTAKEELEKKKNMGY"
     gene            2110..2646
                     /locus_tag="JN001_001493"
     CDS             2110..2646
                     /locus_tag="JN001_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000205831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY9052764.1"
                     /translation="MTTDQHQEILRTEGLSKFFPGVKALDNVDFSLRRGEIMALLGEN
                     GAGKSTLIKALTGVYHADRGTIWLEGQVISPKNTAHAQQLGIGTVYQEVNLLPNMSVA
                     DNLFIGREPKRFGLLRRKEMEKRATELMASYGFSLDVREPLNRFSVAMQQIVAICRAI
                     DLSAKVLILDEPTASLDT"
     gene            2650..3612
                     /locus_tag="JN001_001494"
     CDS             2650..3612
                     /locus_tag="JN001_001494"
                     /inference="COORDINATES: protein motif:HMM:NF012235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY9052765.1"
                     /translation="MELLFGLMRQLRDRGVSLIFVTHFLDQSYQVSDRITVLRNGSFV
                     GCRETRELPQIELVKMMLGRELDTHALQRAGRTLLSDKPVAAFKNYGKKGTIAPFDLE
                     VRPGEIVGLAGLLGSGRTETAEVIFGIKPADSGTALIKGKPQNLRSPHQASVLGIGFC
                     PEDRKTDGIIAAASVRENIILALQAQRGWLRPISRKEQQEIAERFIRQLGIRTPSTEQ
                     PIEFLSGGNQQKVLLSRWLLTRPQFLILDEPTRGIDVGAHAEIIRLIETLCADGLALL
                     VISSELEELVGYADRVIIMRDRKQVAEIRLAELSVPAIMNAIAA"
     gene            3626..4648
                     /locus_tag="JN001_001495"
     CDS             3626..4648
                     /locus_tag="JN001_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313234.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9052766.1"
                     /translation="MPQSLPDTTTPKRRFRWPTGMPQLVALLLVLLVDSLVAPHFWQV
                     VLQDGRLFGSPIDILNRAAPVALLAIGMTLVIATGGIDLSVGAVMAIAGATTAAMTVA
                     EVSLPIVLLSALGTGILAGLWNGILVAILKIQPFVATLILMVAGRGVAQLITSGQIVT
                     FNSPDLSWFGSGSLLFLPTPVIIAVLTLLLFWLLTRKTALGMFIEAVGINIRAAKNAG
                     VNTRIIVMLTYVLSGLCAAIAGIIVAADIRGADANNAGLWLELDAILAVVIGGGSLMG
                     GRFNLLLSVVGALIIQGMNTGILLSGFPPEMNQVVKAVVVLCVLIVQSQRFISLIKGV
                     RSRDKT"
     gene            4635..5630
                     /gene="yjfF"
                     /locus_tag="JN001_001496"
     CDS             4635..5630
                     /gene="yjfF"
                     /locus_tag="JN001_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease YjfF"
                     /protein_id="HAY9052767.1"
                     /translation="MIKRNLPLMITIGVFVLGYFYCLTQFPGFASTRVICNILTDNAF
                     LGIIAVGMTFVILSGGIDLSVGSVIAFTGVFLAKVVGDFGLSPLLAFPLVLVMGCAFG
                     AFMGLLIDALKIPAFIITLAGMFFLRGVSYLVSEESIPINHPIYDTLSSLAWKIPGGG
                     RLSAMGLLMLAVVVIGIFLAHRTRFGNQVYAIGGNATSANLMGISTRSTTIRIYMLST
                     GLATLAGIVFSIYTQAGYALAGVGVELDAIASVVIGGTLLSGGVGTVLGTLFGVAIQG
                     LIQTYINFDGTLSSWWTKIAIGILLFIFIALQRGLTVLWENRQSSPVTRVNIAQR"
     gene            complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JN001_001497"
     CDS             complement(5663..6661)
                     /gene="fbp"
                     /locus_tag="JN001_001497"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 fructose-bisphosphatase"
                     /protein_id="HAY9052768.1"
                     /translation="MKTLGEFIVEKQHEFSHATGELTALLSAIKLGAKIIHRDINKAG
                     LVDILGASGAENVQGEVQQKLDLFANEKLKAALKARDIVAGIASEEEDEIVVFEGCEH
                     AKYVVLMDPLDGSSNIDVNVSVGTIFSIYRRVTPVGTPVTEEDFLQPGNKQVAAGYVV
                     YGSSTMLVYTTGCGVHAFTYDPSLGVFCLCQERMRFPEKGKTYSINEGNYIKFPNGVK
                     KYIKFCQEEDKSTNRPYTSRYIGSLVADFHRNLLKGGIYLYPSTASHPDGKLRLLYEC
                     NPMAFLAEQAGGKASDGKERILDIIPETLHQRRSFFVGNDHMVEDVERFIREFPDA"
     gene            6837..8210
                     /gene="mpl"
                     /locus_tag="JN001_001498"
     CDS             6837..8210
                     /gene="mpl"
                     /locus_tag="JN001_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-
                     meso-diaminopimelate ligase"
                     /protein_id="HAY9052769.1"
                     /translation="MRIHILGICGTFMGGLAMLARQLGHEVTGSDANVYPPMSTLLEK
                     QGIELIQGYDASQLDPQPDLVIIGNAMTRGNPCVEAVLEKNIPYMSGPQWLHDFVLRD
                     RWVLAVAGTHGKTTTAGMATWILEQCGYKPGFVIGGVPGNFEVSARLGESDFFVIEAD
                     EYDCAFFDKRSKFVHYCPRTLILNNLEFDHADIFDDLKAIQKQFHHLVRIVPGQGRII
                     WPENDINLKQTMAMGCWSEQELVGEQGHWQAKKLTTDASEWEVLLDGEKVGEVKWSLV
                     GEHNMHNGLMAIAAARHVGVAPADTANALGSFINARRRLELRGEANGVTVYDDFAHHP
                     TAILATLAALRGKVGGTARIIAVLEPRSNTMKMGICKDDLAPSLGRADEVFLLQPAHI
                     PWQVAEVAEACVQPAHWSGDVDTLADMVVKTAQPGDHILVMSNGGFGGIHQKLLDGLA
                     KKAEAAQ"
     gene            complement(8293..8844)
                     /locus_tag="JN001_001499"
     CDS             complement(8293..8844)
                     /locus_tag="JN001_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000166269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein"
                     /protein_id="HAY9052770.1"
                     /translation="MTKQPEDWLDDVPGDDIEDEDDEIIWVSKSEIKRDAEELKRLGA
                     EIVDLGKNALDKIPLDADLRAAIELAQRIKMEGRRRQLQLIGKMLRQRDVEPIRQALD
                     KLKNRHNQQVVLFHKLENLRDRLIDQGDDAIAEVLNLWPDADRQQLRTLIRNAKKEKE
                     GNKPPKSARQIFQYLRELAENEE"
     gene            8938..10290
                     /gene="pmbA"
                     /locus_tag="JN001_001500"
     CDS             8938..10290
                     /gene="pmbA"
                     /locus_tag="JN001_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease PmbA"
                     /protein_id="HAY9052771.1"
                     /translation="MALAMKVISQVEAQRKILEEAVSTALELASGKSDGAEVAVSKTT
                     GISVSTRYGEVENVEFNSDGALGITVYHQNRKGSASSTDLSPQAIARTVQAALDIARY
                     TSPDPCAGVADKELLAFDAPDLDLFHPAEVSPDEAIELAARAEQAALQADKRITNTEG
                     GSFNSHYGVKVFGNSHGMLQGYCSTRHSLSSCVIAEENGDMERDYAYTIGRAMSDLQT
                     PEWVGVDCARRTLSRLSPRKLSTMKAPVIFANEVATGLFGHLVGAIAGGSVYRKSTFL
                     LDSLGKQILPDWLTIEEHPHLLKGLASTPFDSEGVRTERRDIIKDGILTQWLLTSYSA
                     RKLGLKSTGHAGGIHNWRIAGQGLSFEQMLKEMGTGLVVTELMGQGVSAITGDYSRGA
                     AGFWVENGEIQYPVSEITIAGNLKDMWRNIVTVGNDIETRSNIQCGSVLLPEMKIAGQ
                     "
     gene            10474..10860
                     /gene="cybC"
                     /locus_tag="JN001_001501"
     CDS             10474..10860
                     /gene="cybC"
                     /locus_tag="JN001_001501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313240.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b562"
                     /protein_id="HAY9052772.1"
                     /translation="MRKSLLAILAVSSLVFSSASFAADLEDNMETLNDTLKVVEKADN
                     AAQVKDALTKMRAAALDAQKATPPKLEGKSPDSPEMKDFRHGFDILVGQIDDALKLAN
                     EGKVKEAQAAAEQLKTTRNAYHQKYR"
     gene            complement(10904..11368)
                     /gene="nrdG"
                     /locus_tag="JN001_001502"
     CDS             complement(10904..11368)
                     /gene="nrdG"
                     /locus_tag="JN001_001502"
                     /EC_number="1.97.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate
                     reductase-activating protein"
                     /protein_id="HAY9052773.1"
                     /translation="MNYHQYYPVDIVNGPGTRCTLFVSGCVHECPGCYNKSTWRVNSG
                     QPFTKAMEDQIINDLNDTRIKRQGISLSGGDPLHPQNVPDILKLVQRIRAECPGKDIW
                     VWTGYKLDELNAAQMQVVDLINVLVDGKFVQDLKDPSLIWRGSSNQVVHHLR"
     gene            complement(11558..13696)
                     /gene="nrdD"
                     /locus_tag="JN001_001503"
     CDS             complement(11558..13696)
                     /gene="nrdD"
                     /locus_tag="JN001_001503"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004128226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HAY9052774.1"
                     /translation="MTPHVMKRDGCKVPFKSERIKEAILRAAKAAEVDDADYCATVAA
                     VVSEQMQGRNQVDINEIQTAVENQLMSGPYKQLARAYIEYRHDRDIEREKRGRLNQEI
                     RGLVEQTNASLLNENANKDSKVIPTQRDLLAGIVAKHYARQHLLPRDVVQAHERGDIH
                     YHDLDYSPFFPMFNCMLIDLKGMLTQGFKMGNAEIEPPKSISTATAVTAQIIAQVASH
                     IYGGTTINRIDEVLAPFVTASYNKHRKTAEEWNIPDAEGYANSRTIKECYDAFQSLEY
                     EVNTLHTANGQTPFVTFGFGLGTSWESRLIQESILRNRIAGLGKNRKTAVFPKLVFAI
                     RDGLNHKKGDPNYDIKQLALECASKRMYPDILNYDQVVKVTGSFKTPMGCRSFLGVWE
                     NENGEQIHDGRNNLGVISLNLPRIALEAKGDEATFWKLLDERLVLARKALMTRIARLE
                     GVKARVAPILYMEGACGVRLNADDDVSEIFKNGRASISLGYIGIHETINALFGGEHVY
                     DNEQLRAKGIAIVERLRQAVDQWKEETGYGFSLYSTPSENLCDRFCRLDTAEFGVVPG
                     VTDKGYYTNSFHLDVEKKVNPYDKIDFEAPYPPLANGGFICYGEYSNIQHNLKALEDV
                     WDYSYQHVPYYGTNTPIDECYECGFTGEFECTSKGFTCPKCGNHDASRVSVTRRVCGY
                     LGSPDARPFNAGKQEEVKRRVKHLGNGQIG"
     gene            complement(14090..15745)
                     /gene="treC"
                     /locus_tag="JN001_001504"
     CDS             complement(14090..15745)
                     /gene="treC"
                     /locus_tag="JN001_001504"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HAY9052775.1"
                     /translation="MTNPPHWWQNGVIYQIYPKSFQDTTGSGTGDLRGVIQRLDYLHK
                     LGVDAIWLTPFYVSPQVDNGYDVANYTAIDPTYGTLDDFDELVTQAKSRGIRIILDMV
                     FNHTSTQHAWFREALNKESPYRQFYIWRDGEPETPPNNWRSKFGGSAWRWHAESEQYY
                     LHLFAPEQADLNWENPAVRAVLKKVCEFWADRGVDGLRLDVVNLISKDPRFPDDLDGD
                     GRRFYTDGPRAHEFLHEMNRDVFTPRGLMTVGEMSSTSLEHCQRYAALTGSELSMTFN
                     FHHLKVDYPGGEKWTLAKPDFVALKTLFRHWQQGMHNVAWNALFWCNHDQPRIVSRFG
                     DEGEYRVPAAKMLAMVLHGMQGTPYIYQGEEIGMTNPHFTRITDYRDVESLNMFAELR
                     NDGRDADELLAILASKSRDNSRTPMQWSNGDNAGFTAGEPWIGLGDNYQQINVEAALA
                     DDSSVFYTYQKLIALRKQEAILTWGNYQDLLPNSPVLWCYRREWKGQTLLVIANLSRE
                     IQPWQPGQMRGNWQLVMHNYEEASPQPCAMNLRPFEAVWWLQK"
     gene            complement(15795..17216)
                     /gene="treB"
                     /locus_tag="JN001_001505"
     CDS             complement(15795..17216)
                     /gene="treB"
                     /locus_tag="JN001_001505"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS trehalose transporter subunit IIBC"
                     /protein_id="HAY9052776.1"
                     /translation="MMSKINQTDIDRLIELVGGRGNIATVSHCITRLRFVLNQPANAR
                     PKEIEQLPMVKGCFTNARQFQVVIGTNVGDYYQALIASTGQAQVDKEQVKKAARQNMK
                     WHEQLISHFAETFFPLLPALISGGLILGFRNVIGDLPMSNGQTLAQMYPSLQTIYDFL
                     WLIGEAIFFYLPVGICWSAVKKMGGTPILGIVLGVTLVSPQLMNAYLLGQQLPEVWDF
                     GMFSIAKVGYQAQVIPALLAGLALGVIETRLKRIVPDYLYLVVVPVCSLILAVFLAHA
                     LIGPFGRMIGDGVAFAVRHLMTGSFAPIGAALFGFLYAPLVITGVHQTTLAIDLQMIQ
                     SMGGTPVWPLIALSNIAQGSAVIGIIISSRKHNEREISVPAAISAWLGVTEPAMYGIN
                     LKYRFPMLCAMIGSGLAGLLCGLNGVMANGIGVGGLPGILSIQPNYWQVFALAMAIAI
                     IIPIVLTSFIYQRKYRLGTLDIV"
     gene            complement(17317..18282)
                     /gene="treR"
                     /locus_tag="JN001_001506"
     CDS             complement(17317..18282)
                     /gene="treR"
                     /locus_tag="JN001_001506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001181347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator TreR"
                     /protein_id="HAY9052777.1"
                     /translation="MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMN
                     QHGFSPSRSARAMRGQSDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQF
                     SPQLVAEHLGVLKRRNIDGVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDE
                     GAIKILMQRLYDQGHRNISYLGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAM
                     KQGYENVAKVITPETTALLCATDTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPE
                     IVTVDPGYAEAGRQAACQLIAQVTGRSEPQQIIIPATLSRSFPER"
     gene            18467..18520
                     /gene="mgtL"
                     /locus_tag="JN001_001507"
     CDS             18467..18520
                     /gene="mgtL"
                     /locus_tag="JN001_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_003933616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mgtA regulatory leader peptide MgtL"
                     /protein_id="HAY9052778.1"
                     /translation="MEPDPTPLPRRRLKLFR"
     gene            18661..21357
                     /gene="mgtA"
                     /locus_tag="JN001_001508"
     CDS             18661..21357
                     /gene="mgtA"
                     /locus_tag="JN001_001508"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HAY9052779.1"
                     /translation="MFKEIFTRLIRHLPSRLVHRDPLPGAQQTVNTVVPPSLSAHCLK
                     MAVMPEEELWKTFDTHPEGLNQAEVESAREQHGENKLPAQQLSPWWVHLWVCYRNPFN
                     ILLTILGAISYATEDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVL
                     RVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARDLFVAQASLTGESLP
                     VEKAATTRQPEHSNPLECDTLCFMGTTVVSGTAQAMVIATGANTWFGQLAGRVSEQES
                     EPNAFQQGISRVSMLLIRFMLVMAPVVLLINGYTKGDWWEAALFALSVAVGLTPEMLP
                     MIVTSTLARGAVKLSKQKVIVKHLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS
                     GKTSERVLHSAWLNSHYQTGLKNLLDTAVLEGTDEESARSLASRWQKIDEIPFDFERR
                     RMSVVVAENTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQ
                     GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGITVK
                     ILTGDSELVAAKVCHEVGLDAGEVVIGSDIETLSDDELANLAQRTTLFARLTPMHKER
                     IVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAVDIAREAADIILLEKSLMVLE
                     EGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVS
                     QVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET
                     QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLMIMTVIVMIVGIALPFSPL
                     ASYLQLQALPLSYFPWLVAILAGYMTLTQLVKGFYSRRYGWQ"
     gene            complement(21563..21949)
                     /gene="ridA"
                     /locus_tag="JN001_001509"
     CDS             complement(21563..21949)
                     /gene="ridA"
                     /locus_tag="JN001_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-iminobutanoate/2-iminopropanoate deaminase"
                     /protein_id="HAY9052780.1"
                     /translation="MSKTIATENAPAAIGPYVQGVDLGNMIITSGQIPVNPKTGEVPA
                     DVAAQARQSLDNVKAIVEAAGLKVGDIVKTTVFVKDLNDFATVNATYEAFFTEHNATF
                     PARSCVEVARLPKDVKIEIEAIAIRR"
     gene            complement(22022..22483)
                     /gene="pyrI"
                     /locus_tag="JN001_001510"
     CDS             complement(22022..22483)
                     /gene="pyrI"
                     /locus_tag="JN001_001510"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000148566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase regulatory
                     subunit"
                     /protein_id="HAY9052781.1"
                     /translation="MTHDNKLQVEAIKRGTVIDHIPAQIGFKLLSLFKLTETDQRITI
                     GLNLPSGEMGRKDLIKIENTFLSEDQVDQLALYAPQATVNRIDNYEVVGKSRPSLPER
                     IDNVLVCPNSNCISHAEPVSSSFAVRKRANDIALKCKYCEKEFSHNVVLAN"
     gene            complement(22496..23431)
                     /gene="pyrB"
                     /locus_tag="JN001_001511"
     CDS             complement(22496..23431)
                     /gene="pyrB"
                     /locus_tag="JN001_001511"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase"
                     /protein_id="HAY9052782.1"
                     /translation="MANPLYQKHIISINDLSRDDLNLVLATAAKLKANPQSELLKHKV
                     IASCFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTYVDA
                     IVMRHPQEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAM
                     VGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEE
                     VMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHPLPRVDEIAT
                     DVDKTPHAWYFQQAGNGIFARQALLALVLNRDLVL"
     gene            complement(23435..23569)
                     /gene="pyrL"
                     /locus_tag="JN001_001512"
     CDS             complement(23435..23569)
                     /gene="pyrL"
                     /locus_tag="JN001_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyr operon leader peptide"
                     /protein_id="HAY9052783.1"
                     /translation="MVQCVRHFVLPRLKKDAGLPFFFPLITHSQPLNRGAFFCPGVRR
                     "
     gene            complement(23849..24244)
                     /locus_tag="JN001_001513"
     CDS             complement(23849..24244)
                     /locus_tag="JN001_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY9052784.1"
                     /translation="MVERTAVFPAGRHSLYAEHRYSAAIRSGDLLFVSGQVGSREDGT
                     PEPDFQQQVRLAFDNLHATLAAAGCTFDDIIDVTSFHTDPEKQFEDIMTVKNEIFSAP
                     SYPTWTAVGVTWLAGFDFEIKVIARIPEL"
     gene            complement(24375..25088)
                     /gene="bdcA"
                     /locus_tag="JN001_001514"
     CDS             complement(24375..25088)
                     /gene="bdcA"
                     /locus_tag="JN001_001514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9052785.1"
                     /translation="MGAFTGKTVLILGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAA
                     ERLAQETGATAVFTDSADKDAVIDVVRKSGALDILVVNAGIGVFGDALELNADDIDRL
                     FKINIHAPYHASVEAARQMPEGGRILIIGSVNGDRMPVAGMAAYAASKSALQGMARGL
                     ARDFGPRGITINVVQPGPIDTDANPANGPMRDMSHSFMAIKRHGQPEEVAGMVAWLAG
                     PEASFVTGAMHTIDGAFGA"
     gene            25159..25752
                     /locus_tag="JN001_001515"
     CDS             25159..25752
                     /locus_tag="JN001_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313255.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY9052786.1"
                     /translation="MVTKKQSRVPGRPRRFAPEQAVSAAKVLFHQKGFDAVSVAEVTD
                     YLGINPPSLYAAFGNKAGLFSRVLNEYVGTEAIPLADILRDDRPVGECLAEVLKEAAR
                     RYSQNGGCAGCMVLEGIHSHDPQARDIAVQYYHAAETTIYDYIARRHPQSAQCVTDFM
                     STVMSGLSAKAREGHSIEQLCATAALAGEAIKTILKE"
     gene            25897..26349
                     /locus_tag="JN001_001516"
     CDS             25897..26349
                     /locus_tag="JN001_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY9052787.1"
                     /translation="MIIGNIHNLQPWLPQELRQAIEHIKAHVTAETPKGKHDIEGNRL
                     FYLISEDMTEPHEARRAEYHARYLDIQIVLKGQEGMTFSTQPAGTPDTDWLADKDIAF
                     LPEGVDEKTVILNEGDFVVFYPGEVHKPLCAVGAPARVRKAVVKMLMA"
     gene            26472..27618
                     /locus_tag="JN001_001517"
                     /pseudo
     CDS             26472..27618
                     /locus_tag="JN001_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016234052.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
BASE COUNT         6626 a         6839 c         7302 g         6851 t
ORIGIN      
        1 tccagcaagt ggctatgaac agcaaaatgg tggtcgggtt tgcttgttct taccgttcaa
       61 gccttgcaac cgctgagaat aatgatggtg gaatagagag tttatttatc gcgggcataa
      121 aaaaaccctt actaaccgaa gcccggcgtt cagggttatt gcgctagaag aacttattta
      181 ttctttgcgc gctcgaagga agcaacgatt tcagctttag cggcttctgc gttttcccaa
      241 ccttcaactt tcacccactt gcctttttcg aggtctttgt agtgctcgaa gaagtgagcg
      301 atttgcgctt tcagcagttc aggcagatcg tttacgtctt taatgtgatc gtattctttg
      361 ctcagcttgc tgtgcggaac cgcaaccagt ttcgcatctt caccggcttc gtcggtcatt
      421 ttcagaacgc caaccggacg gcaacggatc acagaaccag gctgcagcgg gtacggagtc
      481 gggaccagta cgtcaaccgg gtcaccgtcc agagacaggg tgtggttgat gtaaccgtag
      541 ttgcacggat agaacatcgc ggtggacatg aagcggtcaa cgaacagtgc gccgctctct
      601 ttgtcgattt cgtatttgat cggatctgcg ttagccggga tctcaataac aacgtagatg
      661 tcttccggca gatctttacc cgcagggacg ttgagtaagc tcatgtctgt ttcctttaaa
      721 aatatgtggc aaacaagtgc cgagtattat agccaactcg cgccgaatgt ctttgcttgt
      781 tttcgtcttc attttccttt ttcgccagtt ttaagacggt atacagagca ggaaaatcca
      841 taaccgtagc cgcatttttc atagtgagat gaaagcgatt acaaacttgt gattaacgtt
      901 ttatttactt ttttgaagtg tgatgtaacg caatccgtta cataacgaat tgtctatagt
      961 tttttcgcga acatcttttc accaataata attaccccga cgaggacaac cctatgtgga
     1021 aacgcttact tgtagtctct gcagtctcgg cagccatgtc gtctatggcg ttggccgctc
     1081 cattaaccgt aggattttcg caggtcggat cggaatccgg ctggcgcgcc gcagaaacca
     1141 atgtggcgaa aagtgaggcc gaaaaacgcg gaattacgtt gaaaattgcc gatggtcagc
     1201 aaaagcagga aaaccggatt aaagcggtac gttccttcgt tgcacaaggg gtggatgcga
     1261 tctttatcgc tccagtggtt gcgacgggtt gggaaccggt attaaaagag gcgaaagatg
     1321 ccgaaatccc ggtcttcttg ctcgaccgtt ccatcgatgt gaaagacaaa tctctctata
     1381 tgaccaccgt tactgccgac aacatcctcg aaggtaagtt gatcggtgac tggctggtaa
     1441 aagaagtgaa tggcaaacca tgcaacgtgg tggagctgca gggcaccgtt ggggccagcg
     1501 tcgccattga ccgtaagaaa ggctttgccg aagccattaa gaatgcgcca aatatcaaaa
     1561 ttatccgctc gcagtcaggt gacttcaccc gcagtaaagg caaagaagtc atggagagct
     1621 ttatcaaagc ggaaaacaac ggcaaaaaca tctgcatggt ttacgcccat aacgacgaca
     1681 tggtgattgg tgcaattcag gcaattaaag aagcgggcct gaaaccgggc aaagatattc
     1741 tgacaggttc tatcgatggc gtaccggata tctacaaagc gatgattgat ggcgaagcga
     1801 acgccagtgt tgaactgacg ccgaatatgg cgggacccgc ttttgacgcg ctggagaaat
     1861 acaaaaaaga cggcaccatg cctgaaaagc tgacgttaac caaatccacc ctttacctgc
     1921 ctgataccgc aaaagaagag ttagagaaga agaaaaatat ggggtattga gggttgctat
     1981 gcctgatgcc gattcgtagg ccggataagg cgctcgcgcc gcatccggcg atggtgcact
     2041 gaagcctgat gcgacgctta ccgcgtctta tcatgcctac tgggagcacg ctttacaccg
     2101 ggggaaacca tgacgaccga ccaacaccag gaaatcctcc gcaccgaagg attaagtaaa
     2161 tttttccccg gcgtcaaagc gttagacaac gttgatttca gcctgcgccg tggcgaaatc
     2221 atggcgctgc tcggtgaaaa cggggcggga aaatcaacgc taatcaaagc attaactggt
     2281 gtataccacg ccgatcgcgg caccatctgg ctggaaggcc aggttatctc accgaaaaat
     2341 accgcccacg cgcaacaact cggcattggc accgtctatc aggaagtcaa cctgctaccc
     2401 aatatgtcgg tcgctgataa tctatttata ggccgcgaac ccaaacgctt cggccttcta
     2461 cgccgcaaag agatggaaaa gcgcgccacc gaactgatgg catcttacgg tttctccctc
     2521 gacgtgcgcg aaccgctcaa ccgcttttca gtcgcgatgc agcaaatcgt cgccatttgc
     2581 cgggctatcg atctctccgc caaagtgctg atcctcgatg aacccaccgc cagcctcgac
     2641 acctaggaag tggagctatt atttggcctg atgcgtcagt tgcgcgatcg cggcgtcagc
     2701 ctgatctttg tcactcactt tctcgatcag agctatcagg tcagcgatcg gatcaccgtt
     2761 ttacgcaacg gcagtttcgt aggctgtcgg gaaacgcgcg agctaccgca gatcgaactg
     2821 gtaaaaatga tgctggggcg cgagctggat acccacgcgc tacagcgtgc cgggcgaaca
     2881 ttgttgagcg acaaacccgt tgccgcgttc aaaaattacg gcaaaaaagg aacgatagca
     2941 ccgtttgatc tcgaagtgcg ccccggcgag atcgtcggcc tggcaggctt gctgggatcc
     3001 ggacgtaccg aaaccgccga agtgatcttc ggtatcaaac ctgctgacag cggcacggcg
     3061 ttgatcaaag gcaaaccgca aaacctgcga tcgccacatc aggcttcggt actgggcatc
     3121 ggcttctgcc cggaagacag gaaaaccgat ggcatcatcg ctgccgcctc ggtgcgggaa
     3181 aatatcatcc tcgctctcca ggcccagcgc ggctggctac gacctatttc ccgcaaagag
     3241 cagcaagaga ttgccgaacg ctttatccgc cagcttggca ttcgcacacc ttcaactgaa
     3301 caaccgattg aatttctctc cggcggcaat cagcaaaaag tgttgctttc acgttggcta
     3361 ctgacccgac cgcaatttct gatcctcgat gagccaaccc gtggcattga tgttggtgcc
     3421 cacgccgaga tcatccgcct gattgaaacg ctatgcgccg atggtctggc gctgctggtg
     3481 atctcctccg aactggaaga actggtgggc tatgccgacc gggtgatcat catgcgcgat
     3541 cgcaaacagg tggcggagat ccggctggca gagctttccg ttccggctat catgaacgcc
     3601 attgcggcgt aaggagaaca gtgtgatgcc tcaatctctt ccggacacca ctacgccaaa
     3661 aaggcgcttt cgctggccga cggggatgcc gcagctggta gcactattgc tggtgctgct
     3721 ggtcgacagc ctggtagccc cgcatttctg gcaggtagtg cttcaggatg ggcgtttgtt
     3781 cggtagcccc atagacattc ttaaccgtgc agcccccgtt gcgttactgg cgattggtat
     3841 gacgctggtg atcgccaccg gtgggattga tctctccgta ggggcggtga tggctatcgc
     3901 cggagccaca acggctgcga tgacggtcgc ggaagtcagc ctgccgattg ttttgttaag
     3961 cgccctaggc accggcatcc tggcgggatt gtggaacggc atactggtag cgatcctcaa
     4021 aattcagcca tttgtcgcca ccctgatcct gatggtcgcc gggcgcggcg tggcgcaact
     4081 gatcacctcc ggacagatcg tcacgtttaa ctcgccggat ctctcatggt ttggcagtgg
     4141 atcgctgttg ttcctgccaa cgccagtcat tattgcggta ctgacgcttc tcctgttctg
     4201 gctgttgacc cgcaaaacgg cactggggat gtttatcgaa gccgttggta tcaacattcg
     4261 ggcggcaaaa aatgccgggg taaacacgcg gatcatcgtc atgctcactt atgtgttgag
     4321 cgggctgtgt gcggcgattg cgggcattat cgtggcggcg gatattcgcg gtgccgatgc
     4381 caacaacgcc ggattatggc tggagctgga cgccattctc gcggtggtga ttggcggcgg
     4441 atcgctgatg ggcgggcgct ttaacctgct gctctcggta gtgggggcgc tgattattca
     4501 ggggatgaac accggaattt tgctttcggg ctttccaccg gagatgaacc aggtggtgaa
     4561 agcggtggtg gtgctttgcg tgctgattgt ccagtcgcaa cgctttatca gtctgattaa
     4621 aggagtacgt agccgtgata aaacgtaatt tgccactgat gatcaccatc ggcgtctttg
     4681 tgctgggcta tttctactgc ctgacgcagt ttcccggttt tgcttccaca agagtgatct
     4741 gcaatatcct gaccgataac gcttttctgg ggattattgc cgttggtatg acctttgtga
     4801 tcctctctgg tggtatcgat ctctccgtcg gttcggtgat cgcctttact ggcgtgtttc
     4861 tggcaaaagt ggttggcgat ttcggcctct cgccgctgct ggcgtttccg ctagtgctgg
     4921 tgatgggctg tgccttcggc gcatttatgg ggcttctgat cgacgccctg aagatcccgg
     4981 catttatcat tacgcttgcg gggatgttct ttttgcgcgg cgtcagctat ctcgtttcgg
     5041 aagagtcgat tccgataaac catcccattt atgacacgct ctcaagcctt gcgtggaaaa
     5101 tccccggcgg cggtcgcctt agtgcgatgg ggctgttgat gctggcggtg gtggttatcg
     5161 gtattttcct tgcgcatcgt acccgttttg gcaatcaggt gtacgctatt ggcggcaacg
     5221 cgacgtcggc gaacctgatg gggatttcta ctcgcagcac tactattcgc atttatatgc
     5281 tctccaccgg actggcaaca ctggcgggga ttgtcttctc gatttatacc caggccggat
     5341 atgcactggc gggcgtaggt gtggaactgg acgccatcgc gtcggtggtg attggcggta
     5401 cgttgttaag tggtggcgtc gggacggtgc ttgggacgct ttttggcgtg gcaattcagg
     5461 gactgatcca gacttacatc aactttgacg gcacgctgag ttcctggtgg acgaaaatcg
     5521 ccatcggtat tttgttgttt atttttatag cattacagcg tgggttaacg gtgctgtggg
     5581 agaatcgtca gagttcgcca gtgacaagag tcaacattgc gcagcgataa aaatgcctct
     5641 ccgtgtggag aggcgcagga gattacgcgt ccgggaactc acggataaag cgttcgacat
     5701 cttcaaccat atggtcgttg ccgacaaaga acgaacggcg ctggtgcaga gtttccggga
     5761 tgatatccag aatacgctct ttgccatcgc tcgctttacc gcccgcttgt tccgccagga
     5821 atgccatcgg gttgcactca taaagcaaac gcagtttgcc gtccgggtgg ctggcggtgc
     5881 ttgggtagag ataaataccg cctttcagca ggttacggtg gaaatccgca accagtgaac
     5941 cgatataacg tgaggtatac gggcggttgg tggatttatc ttcttcctgg cagaatttaa
     6001 tgtacttctt caccccgttc ggaaacttaa tgtagtttcc ttcgttgatg gagtaggttt
     6061 tgcctttctc cgggaagcgc atccgttcct ggcacaggca gaaaacgccc agcgaaggat
     6121 cgtaagtaaa ggcgtgaaca ccgcatccgg tggtgtaaac cagcatggta gaggagccgt
     6181 ataccacgta acctgccgca acctgtttgt taccaggctg gaggaaatct tcttccgtta
     6241 ccggcgtgcc gacgggcgta actcggcggt agatggagaa aatggtaccg acagagacgt
     6301 taacatcgat gttggacgag ccatccagtg ggtccatcag caccacgtat tttgcatgtt
     6361 cacagccttc aaagacaaca atctcatctt cttcttcaga ggcaatgcct gcaacgatat
     6421 cgcgtgcttt cagtgcggct ttcagttttt cattagcgaa caagtcgagt ttttgctgaa
     6481 cctcgccctg cacgttctca gcaccgctgg cacccaggat atcaaccagt cctgctttgt
     6541 tgatatcgcg atggataatc ttggcgccca gttttattgc cgacagcaaa gcagtgagct
     6601 caccggtagc atgagaaaac tcgtgctgct tttcgacaat aaattcacct aacgttttca
     6661 taaaactttc cctgcaatgt ttatggagta aagcgaccgc aacaatctta acaaataatc
     6721 tcaatgttgc gctcaggtga atcgcgccag caaattacgg attatcctga aatgcgtttc
     6781 tcacttgccc gacatatgcg taaaatgagc ggcagattaa aaaaggatag tgacgtatgc
     6841 gcattcatat tttaggaatt tgtggcacgt ttatgggcgg tctggcgatg ctggcgcgcc
     6901 agttaggcca tgaagtaacg ggttcggacg ccaatgtgta tccgccgatg agcaccttac
     6961 ttgagaagca aggcattgaa ctgattcagg gttacgatgc cagccagctc gatccgcagc
     7021 cggatctggt gattattggc aacgccatga cccgtggaaa tccgtgtgtg gaagcggtac
     7081 tggaaaaaaa catcccttat atgtcaggtc cacagtggct gcacgatttt gtgctgcgcg
     7141 accgctgggt gctggccgtt gccggtacac acggcaaaac caccaccgcg ggaatggcga
     7201 cctggattct ggaacagtgt ggttacaaac cgggatttgt gatcggcggt gtgccgggga
     7261 actttgaggt ttcggcgcgt ctgggcgaaa gcgacttctt tgttatcgaa gcggatgagt
     7321 acgactgcgc cttcttcgac aaacgctcta aatttgtcca ttactgcccg cgtacgctga
     7381 tcctcaacaa ccttgagttc gatcacgccg atatctttga cgacctgaaa gcgatccaga
     7441 aacagttcca ccatctggtg cgtatcgttc cggggcaggg ccgtattatc tggccggaaa
     7501 atgacatcaa cctgaaacag accatggcga tgggctgctg gagcgagcag gagctggtgg
     7561 gtgagcaggg gcactggcag gcgaaaaagc tgaccactga tgcttccgaa tgggaagtct
     7621 tgctggatgg cgaaaaagtg ggcgaagtga aatggtcgct ggtaggcgaa cataatatgc
     7681 ataatggcct gatggcgatt gcggcggccc gccatgttgg cgtagcgccg gcagataccg
     7741 ctaacgcgct gggttcgttt attaatgctc gtcgccgtct ggagttgcgt ggtgaagcga
     7801 atggcgtcac ggtatatgac gattttgccc atcacccgac ggcgattctg gcaacgctgg
     7861 cggcgctgcg tggcaaagtt ggtggtacag cgcgcattat tgctgtgctg gaaccgcgct
     7921 cgaataccat gaaaatgggg atctgcaaag acgatttggc accttcatta ggtcgtgccg
     7981 atgaagtctt cctgctgcaa ccggcgcata ttccgtggca ggtggcagaa gtggcagaag
     8041 cctgcgttca gcctgcacac tggagtggcg atgtggatac gctggcagat atggtggtga
     8101 aaaccgctca gcctggcgac catattctgg tgatgagcaa cggcggtttt ggtgggatcc
     8161 atcagaaact gctggatggt ctggcgaaga aggcggaagc tgcgcagtaa ttcggcctca
     8221 gcctgagata gcattgccgg ataaggcgtt tacgccgcat ccggaaaacc atactcacat
     8281 caacaacgaa aattactctt cattctccgc cagttcgcgc agatactgga aaatctggcg
     8341 tgcggatttc ggcggcttat tcccttcttt ctctttcttc gcgttgcgga tcagagtacg
     8401 cagttgctga cgatcggcat cgggccacag atttaatacc tcagcgatgg cgtcatcacc
     8461 ttgatcgatc agacgatcgc gcaggttttc cagtttatgg aacagcacca cctgctggtt
     8521 gtgacggttt ttcagcttat ccagcgcctg acggatcggt tctacatcgc gctggcgcag
     8581 catcttaccg atgagctgca actggcggcg gcgaccttcc atcttaatac gctgggcgag
     8641 ctcaatagcc gcgcgcagat ccgcatctaa cgggatctta tccagcgcgt ttttccccag
     8701 atcaacaatt tccgcgccaa ggcgttttag ctcctcggca tcacgtttaa tttcactttt
     8761 actgacccag ataatttcat cgtcttcgtc ttcgatgtca tcaccgggaa cgtcgtcgag
     8821 ccagtcttcg ggctgcttag tcatctcagg ctccttaaaa aaagaggcta atgttaccag
     8881 ttaagatgcg cactgaaaaa cggttctctg ttagacttca gagaaactct ctacattatg
     8941 gcacttgcaa tgaaagtaat ctctcaagtt gaagcgcagc gcaagattct ggaagaagca
     9001 gtttccactg cgctggagtt ggcctcaggc aaatcggacg gtgcggaagt tgccgtcagc
     9061 aagaccaccg gcattagcgt aagcacgcgt tatggtgaag tggagaatgt tgaattcaat
     9121 agcgatggcg cgctggggat cactgtttat caccagaacc gcaaaggtag cgcatcatcc
     9181 accgatttaa gcccgcaggc cattgcccgt actgtacagg cggcgctgga tattgcccgt
     9241 tatacctcgc cagatccctg tgccggcgtg gcagacaaag agctgctggc ctttgacgca
     9301 ccagatctcg acttgttcca ccctgcggaa gtttccccgg atgaagccat tgaactggcg
     9361 gcccgcgcag aacaggcggc attgcaggcg gacaaacgca tcaccaatac cgaaggtggc
     9421 agctttaaca gccactacgg tgtcaaagtt tttggcaaca gccacggcat gttgcagggt
     9481 tactgctcaa cgcgtcattc gctctccagc tgtgtaattg ccgaagaaaa tggcgatatg
     9541 gagcgtgatt acgcctacac cattggtcgt gcgatgagcg atctgcaaac gccagagtgg
     9601 gttggggtcg actgtgctcg ccgtacttta tcgcgcctgt caccgcgtaa actctccacc
     9661 atgaaagcgc cggtcatttt tgccaatgaa gtggcaaccg ggctttttgg ccatctggtg
     9721 ggggcgatag cgggtggatc ggtttaccgt aaatctacct tcctgctgga ttcgctgggt
     9781 aaacaaattc tgccggactg gctgaccatt gaagagcatc cgcatctgct gaaagggctg
     9841 gcgtcgacgc cattcgacag cgaaggtgtg cgcaccgagc gtcgcgatat tattaaagat
     9901 ggcatcctga ctcagtggct gctgaccagc tattcggcgc gaaaactggg gctgaaaagc
     9961 accggacatg cgggcggtat tcacaactgg cggattgccg gacaaggtct aagcttcgag
    10021 cagatgctca aagagatggg caccgggctg gtggtgacgg aattgatggg ccagggcgtg
    10081 agtgcaatta ccggtgatta ttcccgtggt gcggcgggct tctgggtaga aaacggcgaa
    10141 attcagtatc cggttagcga aatcaccatc gcaggtaatt taaaagatat gtggcgcaat
    10201 attgtcaccg tcggtaacga tattgaaaca cgcagtaata tacagtgtgg ttctgtgctg
    10261 ttgccggaga tgaaaatcgc cggacagtaa aaaaactggc gcgacctgtc gcgctataaa
    10321 ctaaaaaatt acacaaaatc attcgcactg catcgagacg gaaagtgaat gagggccggg
    10381 gagcgtactc gcagtacgtg acccggtcga atgagcgtag tcgtcgatga ggcagtgtga
    10441 atgatgaagt gtaaataaaa aaggaagtga gcaatgcgaa aaagcctgtt agctattctt
    10501 gcagtctcct cgttggtatt cagttcggcg tcgtttgccg ctgatcttga agacaatatg
    10561 gaaaccctca acgacacttt aaaagtggtc gaaaaagccg ataacgcggc gcaagtcaaa
    10621 gacgcgttaa cgaagatgcg cgccgcagcg ctggatgcgc aaaaagcaac gccgccgaag
    10681 ctcgaaggca aatcaccgga cagcccggag atgaaagact tccgtcacgg tttcgatatt
    10741 ctggtcggtc agattgacga cgcgctgaag ctggcaaatg aaggtaaagt aaaagaagcg
    10801 caggctgccg cagagcaact gaaaacgacc cgcaacgcct atcaccagaa gtatcgttaa
    10861 ttcctcattt ccctttgcct gcactcaggt aacagggaac ttatcatcgc aaatgatgca
    10921 ccacctgatt gctgctgccg cgccagatca gggaagggtc ttttaaatcc tgcacaaatt
    10981 tgccgtcgac cagcacgtta atcaaatcaa caacctgcat ttgcgctgcg ttgagttcgt
    11041 cgagtttata gcctgtccac acccagatgt ctttacccgg acactcggcg cggatgcgtt
    11101 gtaccagttt cagaatatcc ggcacgtttt gcggatgcag cggatcgccg ccggagaggg
    11161 aaataccctg gcgtttgata cgagtgtcat tcagatcgtt aatgatctgg tcttccattg
    11221 ctttagtaaa tggctgaccg gaatttaccc gccatgtgct tttgttatag caaccggggc
    11281 attcatgaac acacccggag acaaacagag tgcaacgagt gccggggccg ttgacgatgt
    11341 cgacaggata gtactgatga taattcatta tttcgcctgg cttatcagtc cgcgtgtaga
    11401 ctgcatccgg taatcaatgc ctgatgcgac gctgtcgcgt cttatcaggc ctacagccgt
    11461 tgccaaatgt aggccggata aggcgtttac gccgcatccg gcaatcaacg cgggatgcga
    11521 cgctttcaca tcacatccgg catttgctta gtgcagatca acctatctgc ccatttccca
    11581 aatgtttaac gcggcgctta acttcttcct gcttgccggc gttaaacgga cgtgcatccg
    11641 ggctacctaa atatccgcac acgcggcgag ttaccgacac acgggaggcg tcatggttac
    11701 cacatttcgg gcaggtgaag cctttgctgg tgcactcgaa ctcaccggta aagccacact
    11761 cgtagcactc atcaatcggt gtattggtgc cgtaatacgg tacatgctga tagctgtaat
    11821 cccagacatc ttccagcgcc ttcaggttgt gctgaatgtt tgaatactcg ccgtagcaaa
    11881 tgaaaccacc gttcgccagc ggcgggtaag gcgcttcaaa gtcgatcttg tcgtacgggt
    11941 tcaccttctt ctccacatcg aggtggaaac tgttggtgta gtaaccttta tcggtcacgc
    12001 ccggcaccac gccaaactca gcagtatcga gacggcagaa gcggtcgcac aggttttcac
    12061 tcggcgtgct gtagagactg aaaccataac ccgtttcttc cttccactga tccactgcct
    12121 gacgcagacg ttcaacaatg gcgatacctt tcgcgcgaag ctgctcgttg tcgtaaacat
    12181 gctcgccgcc gaacagcgcg ttaatggttt cgtggatgcc gatgtaaccc agcgaaatag
    12241 acgcacgacc gtttttgaag atttcagaaa catcatcgtc agcattgaga cgcacgccac
    12301 aagcaccttc catatagagg atcggggcca cgcgcgcttt cacgccttcg agacgagcga
    12361 tacgggtcat cagcgcctta cgtgccagca ccagacgttc atccagcagc ttccagaagg
    12421 tggcttcatc gccttttgct tccagagcaa tacgcggcag gttcaggctg atcacgccga
    12481 ggttgttacg accatcgtgg atctgctcgc cgttttcatt ttcccacacg ccgaggaagc
    12541 tgcggcagcc catcggagtt ttaaacgaac cggtgacttt cactacctga tcgtagttca
    12601 ggatatccgg atacatgcgc ttgcttgcgc actccagcgc cagctgtttg atgtcgtagt
    12661 tcggatcgcc ttttttatgg ttcaggccat cgcgaatcgc aaacaccagt ttcgggaaca
    12721 ccgcagtttt acggttttta ccgaggcctg cgatacggtt acgcaggata gattcctgaa
    12781 tcaggcgcga ctcccagctg gtgcccagac caaaaccaaa ggttacaaac ggcgtctgac
    12841 cgttggcggt gtgcagggtg tttacttcgt actccagcga ctggaaggca tcgtagcact
    12901 ctttaatggt acgagagtta gcgtagcctt cggcgtccgg gatgttccac tcttctgcgg
    12961 tcttgcgatg tttgttgtag ctggcggtga caaacggtgc cagcacttca tcgatacggt
    13021 taatggtggt gccgccataa atatggctgg cgacctgagc aataatctgc gcagttacag
    13081 cggttgccgt agagatcgac ttcggcggtt caatctcggc gttccccatc ttaaagccct
    13141 gggtcagcat gcctttcagg tcgatcaaca tgcagttgaa catcgggaag aacggcgagt
    13201 aatcgagatc gtgatagtga atatcgccac gctcatgtgc ctgcaccacg tcacgcggca
    13261 gcaggtgctg acgtgcatag tgtttagcca cgatcccggc cagcaggtcg cgctgggttg
    13321 gaatcacctt gctgtctttg ttggcgtttt cgttgagtaa cgaggcgttg gtctgctcga
    13381 ccagaccacg gatctcctga ttcaggcgac cgcgtttttc acgttcaatg tcgcgatcgt
    13441 gacggtactc gatgtaagca cgagccagtt gtttgtatgg acctgacatc agctggtttt
    13501 caacagcggt ctggatctca ttgatatcca cctggttgcg gccctgcatc tgctcgctga
    13561 caactgcagc aacagtggcg caataatcgg catcatcgac ttccgctgct ttagctgcac
    13621 gcagaatcgc ttctttgatg cgctctgatt taaacggcac tttgcagccg tctcgtttca
    13681 tcacatgcgg tgtcatgatc gctccatatt tttaagaaca ggttatccac agaaattggg
    13741 aaaggcgttt tccggttttt tcgtttcgtt ttccggtgct ttccgcaatc gccatccgct
    13801 tttccacaac gccgcacctt tttcgtgggg agctgtagta gcaattatag tcgattaata
    13861 caacatattg ggttgggacg cattttaaag tctatatata gtgctttgca tcaaggatgt
    13921 ttgaactttt tttgatgtag ctcaaagtaa aaagcagagc gtacggatga cgggcgctac
    13981 agcgttatgt aaatttttta atgaatttgc tggttgaaaa ataaacaaaa acaacatgct
    14041 gacagacaaa accccggaat gaccggcatt accggggctt agggaagatt tacttctgta
    14101 accaccagac agcctcaaaa ggccgtaaat tcatggcaca gggttgtggt gaggcttctt
    14161 cgtagttatg catcacaagc tgccagttgc cgcgcatttg ccctggctgc cagggttgga
    14221 tctcacggct aaggttggca atgaccagca aggtttgccc cttccattca cggcgatagc
    14281 accacaatac agggctgttt ggcagcagat cctggtaatt gccccatgtc aggatggctt
    14341 cctgcttacg cagtgcgatt aacttttggt aggtgtaaaa caccgaggaa tcatcggcca
    14401 gcgcggcttc tacgttgatt tgttgatagt tatcacccag gccaatccac ggttcgccag
    14461 ccgtaaatcc ggcattatcg ccgttgctcc attgcatggg cgtgcggctg ttgtcacggg
    14521 atttactggc gaggattgcc aataactcgt cggcatcacg accatcgttg cgcagctcgg
    14581 caaacatatt gaggctctct acgtcgcgat agtcagtaat gcgcgtgaaa tgcgggttgg
    14641 tcatgccaat ctcttcgccc tggtagatat acggcgttcc ctgcatgcca tgcagcacca
    14701 tcgccagcat ttttgccgca ggcacgcggt attcaccttc atcaccaaag cgagaaacaa
    14761 tgcgcggctg atcgtggtta caccagaaca aggcattcca tgctacgttg tgcattcctt
    14821 gttgccagtg gcggaacaat gttttcaacg ccacaaagtc aggtttagcc agcgtccatt
    14881 tttcaccacc gggataatcg accttcaggt gatgaaaatt aaaggtcatc gacaattcac
    14941 tgcctgtcag tgccgcgtat cgctggcaat gctcaaggct ggtggaggac atttcaccta
    15001 cggtcattaa cccgcgtggc gtaaacacat cgcggttcat ctcgtgcaaa aactcgtgtg
    15061 ctcgtggccc gtcggtgtag aagcgacgcc cgtcgccatc caggtcatca gggaaacgcg
    15121 ggtctttgga gatcagattc accacatcca ggcgcaaccc gtcgacccca cgatcggccc
    15181 agaactcaca gacttttttc agcactgcgc gtaccgctgg attctcccag ttgagatccg
    15241 cctgttctgg tgcaaagaga tgcaaatagt actgttcgct ttccgcatgc cagcgccacg
    15301 cactaccgcc aaattttgaa cgccagttgt tcggtggcgt ttctggttct ccatcgcgcc
    15361 agatataaaa ctggcggtaa gggctttctt tgttcagcgc ctcgcgaaac caggcatgtt
    15421 gggtagaggt atggttaaac accatatcga gaatgatacg aatcccgcgc gattttgcct
    15481 gtgtcaccag ttcgtcaaaa tcgtccagcg tgccgtaggt gggatcaatc gccgtatagt
    15541 tcgctacgtc gtaaccgtta tcgacctggg gagagacata aaagggggtt agccagatgg
    15601 catcaacgcc cagtttatgc agatagtcca ggcgttggat aacgccacgt aaatcgccgg
    15661 taccgctacc cgtggtgtcc tgaaaactct ttggataaat ctggtagata acgccgtttt
    15721 gccaccagtg gggaggatta gtcattacgt tattcctgca aatgcgaggg ggcgcaattg
    15781 cgccccgaag aaaattaaac aatgtccagc gtgcccaggc ggtatttccg ctgatagata
    15841 aacgaggtga gtacaatcgg gatgatgatg gcgatagcca ttgccagcgc aaacacctgc
    15901 cagtagttcg gttgaatcga gagaattccc ggcaggccgc ctacgccgat gccattcgcc
    15961 ataacgccgt tcaggccgca tagcaatcct gccagaccag aaccaatcat cgcgcacagc
    16021 atcgggaagc gatatttcag gttgatgccg tacattgcag gctcagtgac cccaagccag
    16081 gcggagatcg ccgcaggcac ggagatctcg cgttcattgt gcttgcggct ggaaatgata
    16141 atgccgatca cggcggagcc ctgagcgata ttcgacagcg caatcagtgg ccacactggc
    16201 gtaccaccca tgctttgaat catctgcaaa tcaatagcaa gcgtggtctg gtgtaccccg
    16261 gtgatcacca gcggggcgta caggaagcca aacaatgccg cgccaatcgg agcaaagctg
    16321 ccggtcatca ggtgacgtac cgcaaaggca acgccatcgc caatcatgcg accaaacgga
    16381 ccaatcagcg catgggcgag gaacaccgcg aggatcagcg aacagacggg caccaccacc
    16441 agatagaggt aatctggcac gatgcgttta aggcgagttt caataacgcc cagcgccagc
    16501 ccggctaaca gtgccgggat cacctgcgcc tgatagccca ctttggcgat gctgaacatg
    16561 ccaaagtccc acacttccgg cagctgctgc ccgagcagat aagcgttcat cagttggggg
    16621 gaaaccagtg tcacgccaag cacgatacca aggatcggtg tgccgcccat ttttttcacc
    16681 gctgaccagc aaatcccgac cggcaggtag aagaagatcg cttcaccgat caaccacaga
    16741 aaatcgtaga tcgtttgcag ggaagggtac atttgcgcca gcgtttgacc gttgctcatg
    16801 ggcaaatcgc cgatcacatt gcgaaaaccg aggatcaaac cgccgctaat caacgcgggc
    16861 agcaacggga agaaggtctc tgcgaaatga gagatcaact gctcatgcca tttcatattc
    16921 tgccgggcgg ctttttttac ctgctcttta tcaacctgcg cctgtccggt tgacgctatc
    16981 agtgcttgat agtagtcacc cacgttggtg ccaatcacca cctgaaattg cctggcattg
    17041 gtgaaacagc ctttcaccat ggggagttgc tcaatttctt tcggtctggc attggccggt
    17101 tggttgagga caaagcgtag gcgagtaata cagtggctca ccgtcgcaat attgccgcgc
    17161 ccgccgacca gttcaatcaa ccgatcgata tccgtttggt ttattttgct catcataaag
    17221 ccccatggca gatgacattt ttggttggct gcagaatata ttgcgcggaa aaatttaaaa
    17281 acgggaacgt tcccgaaacg cagcgaagat cacaatttat cgttcaggaa acgatctgga
    17341 cagggtggcg gggatgatga tttgttgcgg ttcgctgcgc ccggttacct gtgcgatcaa
    17401 ctggcaggcc gcctggcgtc cagcttcggc gtaaccggga tctacggtga cgatctccgg
    17461 atggaggaat ttcattaacg gcgtattacc gacgctcgcc agttgcaagg tgtcgatgcg
    17521 ttgctcttgc aggtatttac ttgcgccaag tgccagcgtg tcggttgcgc acagtaaggc
    17581 ggtagtttca ggcgtaatca cttttgctac gttctcatag ccttgcttca tagcaaggcc
    17641 tggcagagcg gcaacgggat gcagtttatg cgctttgcag aacgccaggt aggcttcgtg
    17701 acgtcgctta ccggtcgtca cgtcactgtg cggcacgccg agataactga tattacgatg
    17761 cccctggtca tacagccgtt gcatcaggat cttgattgcc ccttcgtcgt cataacagac
    17821 cgaagcaaag ccttttgcgt cacgcgccag cagaaccagc gatgactgcc agtgggctaa
    17881 catttcttct gttatgccgg taaaaccgaa cagcactacg ccgtcgatat tacgccgttt
    17941 cagcaccccc aaatgttcgg caactaattg cggggaaaac tgactttcca tcatgattgg
    18001 gtcgtaacct tgttcataga actctggcag catggtttga acggcgagat tttctgacaa
    18061 cgaatccagg cgggtaacaa tgatggcgac cactttatcg ctttgcccac gcatagcgcg
    18121 cgcagagcgg gaaggggaaa atccatgctg attcatcact gcttcaacac gctcgcgggt
    18181 gcgctggctc acgccgcttt cgttattcag cacccgggaa actgtagatt tccccacgcc
    18241 gcttaagcgc gcgatgtctt tgatggtcag ccgattttgc atcctgttgt cctgtaacgt
    18301 gttgtttaat tatttgagcc taactttacc cgtgcattca gcaatgggta aagtctggtt
    18361 tatcgttggt ttagttgcca gcaggtatta tatcgccata gatgctacga atattattgg
    18421 attctcctta ttatttgcgg cgcttttttc acttaccgga ggttatatgg aacctgatcc
    18481 cacgcctctc cctcgacgga gattaaaact tttccggtaa gcccgtcttt tcacggcgtt
    18541 accggatgcg taaggccgtg acgttttaac gtccctgctc agctttatta ccttcaggta
    18601 aggcttcgcc acgcctgaag acatttctgt actgtttcag acagtgcgga gggactcctt
    18661 atgtttaaag aaatttttac ccggctcatt cgccatttac cttcccgtct ggttcatcgt
    18721 gatccattgc ctggcgcgca gcagacagtg aatacggtgg tcccgccgtc cttaagtgcg
    18781 cattgcctga aaatggcggt gatgcccgaa gaagaattgt ggaaaacgtt cgacacccat
    18841 ccggaagggt taaatcaggc ggaagtggaa tctgcccgcg aacaacatgg tgaaaataaa
    18901 ttacccgcac aacaactgtc gccgtggtgg gtacatttat gggtctgcta tcgcaacccc
    18961 tttaatattt tactcaccat tctcggcgct atttcttacg ccacggaaga tttatttgct
    19021 gcgggcgtta tcgcgctaat ggtcgctatt tctacgttgc tgaactttat tcaggaagca
    19081 cgttccacta aagcggcaga tgccctgaaa gcgatggtca gcaataccgc gacggtgctg
    19141 cgcgtaatta acgacaaagg cgaaaatggc tggctggaga tcccgatcga ccagctggtg
    19201 cccggcgata ttataaaact ggcggcgggg gatatgatcc cggcagattt acgtatcttg
    19261 caagcgcggg atctgttcgt cgctcaggcg tcgttaaccg gtgagtctct gcccgtggaa
    19321 aaagccgcta ccactcgcca gccggagcac agcaatccgc tggagtgcga cacgctgtgt
    19381 tttatgggca ccaccgtggt gagcggcacg gcacaagcaa tggtgattgc tacaggtgcc
    19441 aatacctggt ttggtcaact ggcggggcgt gttagtgagc aggaaagcga gccgaatgcc
    19501 tttcagcaag ggatcagccg cgtcagtatg ctgctgattc gctttatgct ggtgatggca
    19561 ccggtggtgc tgttaatcaa tggctacacc aaaggcgact ggtgggaagc ggcgctgttt
    19621 gcgctttcgg tcgcggtagg cctaacgccg gaaatgttgc cgatgattgt tacctcgacg
    19681 ctggcgcgcg gcgcagtaaa gctgtcgaaa cagaaagtga tcgtcaaaca tctggatgct
    19741 attcagaact ttggcgcaat ggatattctg tgcactgata aaaccggcac cctgacgcag
    19801 gataaaattg tgctggagaa tcataccgat atctccggta aaaccagcga acgcgtgctg
    19861 catagcgcgt ggttgaacag tcattatcag accggactta aaaacctgct cgatacagcg
    19921 gtgctcgaag gtacggatga agagtcagcg cgctcgctgg ccagtcgttg gcaaaaaatc
    19981 gatgagattc cgtttgattt cgagcgtcgc cggatgtcgg tggtagtggc agaaaatacc
    20041 gagcaccatc agctggtttg caaaggtgca ttgcaggaaa tcctcaatgt gtgttcgcag
    20101 gtgcgtcaca atggcgagat tgtgccgctc gatgacatca tgctgcgtaa gattaagcgg
    20161 gttactgata cgctgaatcg tcaggggctg cgcgtggttg cggtggcgac gaaatacctg
    20221 ccagcgcgtg aaggagatta ccagcgggcg gatgaatccg acctgatcct cgaaggatat
    20281 attgcttttc ttgatccgcc aaaagagaca accgctccgg cactgaaggc attaaaagcg
    20341 agtggaatta ccgtaaaaat ccttactggc gacagtgagt tagttgcagc gaaagtgtgc
    20401 catgaagtgg ggctggacgc gggagaggtg gtcattggta gtgatattga aacgctatct
    20461 gacgacgaac tggcaaatct tgcacagcgc accacgctgt ttgcccgcct gacgccgatg
    20521 cataaagaac gcattgtgac cttactgaag cgcgaagggc atgtggttgg ctttatgggc
    20581 gatggtatta atgatgcgcc cgccttacgc gcggcggata tcggcatttc tgtggacggc
    20641 gcggtagata ttgcccgtga agcggctgat atcatcctgc tggaaaaaag cctgatggtg
    20701 ctggaagagg gggttattga gggacgtcgc actttcgcca acatgctgaa atacatcaaa
    20761 atgacggcga gttctaactt tggtaatgtg ttcagcgtgc tggtggcgag tgctttcttg
    20821 cccttcctgc cgatgttgcc gttacacttg cttattcaga acctgctgta cgatgtgtca
    20881 caggtggcga tcccgtttga taacgtcgac gacgagcaaa ttcaaaagcc gcagcgttgg
    20941 aatccggcgg atctggggcg ctttatgatc ttcttcggac cgatcagctc gatcttcgat
    21001 attctgacgt tttgcctgat gtggtgggta ttccatgcca acacgccgga aacgcaaacg
    21061 ctgttccagt cgggatggtt tgtggtgggc ttactgtcgc aaacgctgat tgtgcatatg
    21121 atccgcaccc gccgtgtgcc gtttattcag agctgtgcat cgtggccgtt aatgatcatg
    21181 accgtgatcg tgatgattgt cgggatcgca ttgccgtttt caccgctggc cagttatctg
    21241 caattacagg cgttgccgtt aagctatttc ccgtggctgg ttgcgattct ggcagggtat
    21301 atgacgttaa cccagttggt gaaaggattt tatagccgtc gttacggctg gcagtaaaga
    21361 ataaactagg catggtggcc cggattcaga ttgcagacaa agtgagtttt gttcatgccg
    21421 gatgcggtgt aaacgcctaa tccggcctac aaattcaatc aattgcagga atcacgtagg
    21481 cctgataagc gtagcgcatc aggcgatttt gcgtttgtca tcagacttaa tccgggcatg
    21541 atagcccgga tttccatcaa gattagcgac gaatagcgat cgcttcgatc tcaatcttta
    21601 cgtctttcgg cagacgggca acttcaacgc aagaacgtgc cgggaaggtg gcgttgtgtt
    21661 cggtgaagaa ggcttcgtaa gtggcgttta cggttgcgaa gtcgttcaga tcttttacaa
    21721 acacggtagt tttaacgatg tcgcccactt tcagaccagc ggcttcgacg atcgctttta
    21781 cgttatccag cgactgacgt gcctgtgcag cgacgtctgc cggtacttcg cccgttttcg
    21841 gatttaccgg gatctgaccg gaggtgatga tcatatttcc cagatcaacg ccctgtacgt
    21901 aaggaccgat agctgctggt gcattttccg tcgcgatagt tttgctcatg atttctcctt
    21961 tattacagcg gtaaaaagtc tggctcatta tagggagcca gacttttatt accaaccgca
    22021 attaattggc cagcaccaca ttatgggaaa actctttttc acagtatttg catttgagcg
    22081 cgatgtcatt ggcgcgtttt cgcacggcaa agctggatga aaccggttcg gcatggctga
    22141 tacagttgct gttcgggcag accaacacat tgtcgatgcg ctctggcaga ctggggcgcg
    22201 atttacccac cacttcatag ttgtcgatac ggttaaccgt ggcttgcggc gcatacaatg
    22261 ccagttgatc tacctgatct tcactcaaaa aggtattttc gattttgatc agatctttgc
    22321 ggcccatctc gccagaaggc aggttcagac caatggtgat gcgctgatcc gtttcggtca
    22381 gcttgaacag actcaacagc ttaaaaccga tctgggcggg gatatggtca attaccgtgc
    22441 cgcgtttaat agcttcaacc tgcaatttat tatcgtgtgt catctctatt tccccttaca
    22501 gtaccagatc gcgattcaga accagtgcca gtaacgcctg gcgagcgaaa atcccgttgc
    22561 ctgcctgctg gaagtaccag gcgtgtggcg ttttatcaac atccgtcgca atttcatcaa
    22621 cacgcggcag cggatgcagt actttcatat tggctttggc gttgtggaga tcgctggcgc
    22681 gaagaacaaa ctgcgctttc acgttggcgt attcggatgg gtccaggcgc tctttttgca
    22741 cgcgggtcat atacaggatg tctacttccg ccatcacttc ttcaatagag ctgtgcagac
    22801 tccatgcgat ccctttttca tcgagcatat ccagaatgta ttgcggcatt gccagcgcgt
    22861 ccggcgcgat gaagtaaaaa cggttgccgt cgaacttcgc taacgcctga gtcagggagt
    22921 gaacggtgcg gccatatttc aggtcaccaa ccattgcgac gtggagattg tccagacgcc
    22981 cctgggtttc ctgaatagtg aataagtcca gcaaggtttg cgtcggatgt tggttggagc
    23041 catcaccggc attcagtacc ggtacattgc cggaaaactc ggtggccagg cgcgccgcac
    23101 cttcctgcgg atgacgcatc actatcgcat cgacgtaagt gctgataacc gaaatggtat
    23161 cggccagcgt ttcgcccttt ttacccagtg atgtattggc gctgtcggag aagcccacca
    23221 cgctggcacc caggcggtgc atggaagttt cgaaagagag gcgggtacgg gtagaggctt
    23281 cgaagaagca gctggcaatg actttgtgct tcaacagctc tgattgcggg tttgctttca
    23341 gttttgccgc tgttgccagc accagattaa ggtcatcgcg actaaggtcg tttatggaaa
    23401 tgatatgttt ctgatatagc ggattagcca tcttttatct cctgacgcct gggcaaaaaa
    23461 aagcccctcg attgaggggc tgggaatggg tgatcaacgg gaagaaaaac ggcaggccag
    23521 cgtctttttt cagacgcggt aagacaaaat gtcgaacaca ctgaaccata catcctcccg
    23581 gcaaattgtc cggcattata ctcatcgtca gaagcggtgc aagcaattga tgcaatattt
    23641 tgtcagcgca aacggtttat ttgaatttaa agttaaaata tatgcatttt tatttactgt
    23701 gattctgggg ggaactgtcg ttcggtatca ataattgcag acatttcctg cttttttctt
    23761 tttcactttc acgcaatcag atatgcattt tattccattc atccgactta tagggcggag
    23821 tgtgaaaacg aacggctagc actattgctt agagctcagg gatgcgcgct atcactttaa
    23881 tttcaaaatc aaagcctgcc agccatgtaa cgcccaccgc cgtccaggtt ggataagatg
    23941 gcgcgctaaa tatttcattt ttcaccgtca tgatgtcttc aaattgtttt tctggatcgg
    24001 tatgaaagct cgtaacatca atgatatcgt caaaagtgca tcccgcagct gccagggtcg
    24061 catgcaaatt atcaaaggcc agtctgactt gttgctgaaa atcgggttct ggtgttccgt
    24121 cctctcgact tcctacttgc ccggaaacaa acagcaaatc gccggaacga atagccgcag
    24181 aataacgatg ctcagcatac agtgaatgtc gtccagcagg gaaaacagcg gttctttcta
    24241 ccatttggtt atcctcaaga tttacgacat gaacagaaga tttatattta ccaggagccg
    24301 cttttagcgg acgacgtgag taaacaaaac ccagacatca tgggaaatgg ctgggcttaa
    24361 ttgagcgtag tcggttatgc gccaaacgcg ccatcaatgg tatgcatcgc gccggtaaca
    24421 aaactggctt ctggccctgc taaccatgcg accataccag cgacctcttc cggttgccca
    24481 tgtcttttga tggccataaa actatgcgac atatcgcgca ttggcccgtt ggcgggatta
    24541 gcgtcggtat caattggccc tggctggacg acgttgatgg tgatcccacg cggtccgaaa
    24601 tcacgggcca gcccgcgcgc catgccttgc agggcagatt tactggcggc ataagcagcc
    24661 atgcctgcaa caggcatacg atcgccattc acggagccga tgattaagat gcgtccgcct
    24721 tcgggcatct gccgggcggc ttcaacagag gcatggtaag gagcatgaat attgattttg
    24781 aaaaggcgat caatatcgtc ggcatttaat tccagggcat cgccaaagac gccaatacct
    24841 gcatttacca ccaggatatc caatgcgccg ctcttacgaa cgacatcaat aacagcgtct
    24901 ttgtcagcac tatctgtgaa tactgctgtc gctccagtct cttgtgccag gcgttcagcg
    24961 gcatctttcg accccgcata ggtgaatcgt acattggccc catcggtgac gaaacgacgt
    25021 acgatagcgg caccgattcc acggctacca ccgaggatga gaactgtctt acctgtaaaa
    25081 gcgcccataa ggactccttg atttattatg taacatgcat tacaaaactg ttttaacttt
    25141 ctgtcaacaa gttttgtaat ggtcactaaa aaacaatctc gcgttccagg tcgtcccaga
    25201 cgtttcgctc ctgagcaggc agtctctgcg gcaaaagtgc tttttcacca aaaaggtttc
    25261 gatgctgtca gtgttgctga agttactgat tatcttggta ttaacccccc gagcctctac
    25321 gcggcttttg gcaataaggc tgggttattt agccgtgtac tcaatgaata tgtcggtacg
    25381 gaagctattc cgcttgccga tattcttcgt gatgatcgtc cggtagggga gtgcctggct
    25441 gaggtattaa aagaagcggc gcgccgatat agccaaaacg gcggctgcgc tggctgtatg
    25501 gttcttgaag gcattcatag tcatgatcca caagcgcgtg atattgccgt tcaatattat
    25561 cacgccgcag aaacgaccat ttatgactat atcgccaggc ggcatccaca aagcgcacaa
    25621 tgtgtgactg attttatgag taccgtgatg tcagggcttt ctgcgaaggc acgggagggg
    25681 cactccatcg aacaactctg tgcaacagct gcactggcgg gggaagcgat aaaaactatt
    25741 ctcaaggagt gatgcgggcc ttgacccgaa aggcgggaac gcgcctgccg ataagttgtg
    25801 ataagacaat aattcacgcg ttaaggctag cggaattgat catcttttcg tataacgatg
    25861 gaaatgaaac gttgttttaa ttaaggagtg gaaaagatga tcatcggaaa tattcataat
    25921 cttcagccgt ggctacccca ggagttacgc caggcgattg agcatatcaa agcacacgtt
    25981 acggcagaaa cgccaaaggg caagcacgat atcgaaggca atcgtctgtt ttatcttatc
    26041 tcggaagata tgaccgagcc gcacgaagct cgccgtgcgg agtaccatgc ccgctatctc
    26101 gacattcaga ttgtgttaaa aggtcaggaa ggcatgacct tcagcacgca acctgcaggc
    26161 accccggata ccgactggtt agctgataaa gacatcgcat ttttgccgga aggcgttgat
    26221 gagaaaacag ttatccttaa tgaaggtgat tttgttgtgt tttatccggg ggaagtgcat
    26281 aaaccgctgt gcgcagtggg cgcgccagcc cgggttcgca aagcagtagt gaagatgctg
    26341 atggcgtgat gacttttcgc cgtaaataac tccaggttta cggcgagttt gtgaaaagag
    26401 cgttttttga tattttttta tgagtaaaat ttgtaatgct tagacgttct tattaactca
    26461 aggagttcgt catgagcaaa atatcagatt tgaattattc tcaacacatt acattagccg
    26521 acaattttaa acaaaaaagt gaagttttaa atacctggcg tgttggaatg aataattttg
    26581 cccgtaatgc cgaggggcag gataacacaa gaaatatcct tgatcctaag acatttttgg
    26641 aatttttggt aaaaatattt actctaggtt atgtggattt tagcaaacgc tccaacgaag
    26701 cgggaagaaa tatgatggct catattgagt cctcatctta tatcaaaaat aatgatggca
    26761 gtgagataat aaagtttgtt atgaataatc ctgaagggga acgagcggat ttatctaagg
    26821 tggaaataga aatcacactt tccactttca ctactatggg gactcgtcaa ggacatacgg
    26881 ctattatatt tcaacaacct gatggttcga ctaatcgtta tgaaggaaag tcctttgaaa
    26941 gaaaagatga gagttcatta cacctgatta ctaacaagat tctggcatgt taccaacgcg
    27001 aagctaacaa ggaaatagct cgtctattaa atatttcaca ggagttaaat aattctcagg
    27061 acttgaataa ctcgcaggtg agttgtaaag attcagttga ttctacgatt acggatttat
    27121 tagaaaaacc attgaataat gcattattag caataaggaa agaacatctg ctattaatgc
    27181 cttatgtatg taatgaatcg atttcatact tgcttggtga aaaagggata ctgaaagaaa
    27241 tagatgacct taacgcagta aataattatc ttcttaataa taagaaagct actgacaatg
    27301 aaattaatga catcaaagtt aacctgtctc atattcttat tgattcctta gatgatgcaa
    27361 aagttaacct tacaccggtc atcgattctg gatgactttt ttaaaatccc catatattaa
    27421 tgatgtaaga atactggatt ggtgttttaa taaaagaatg caatattttg gtgattctga
    27481 aaagataaag tatgcatgct ccgtgataaa tcatattgat tttagccgcg atcaatctaa
    27541 agattttagc tgcgatcaat ctaaaattaa aatagctgag accttatttt tcaatctcga
    27601 taaagaaccc tataaaaa
//
LOCUS       DADMJE010000039        27513 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.040, whole genome shotgun sequence.
ACCESSION   DADMJE010000039 DADMJE010000000
VERSION     DADMJE010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27513)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27513)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27513
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.040"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..190
                     /locus_tag="JN001_001518"
     CDS             <1..190
                     /locus_tag="JN001_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052788.1"
                     /translation="TGTVLGLNARDSKHAGRMFSMHNCQINPGAGPEITTPWKSYQHE
                     KNRNGLMPLIRRRTMLQL"
     gene            556..1623
                     /locus_tag="JN001_001519"
     CDS             556..1623
                     /locus_tag="JN001_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY9052789.1"
                     /translation="MDKSKRHLAWWVVGALAVAAVVAWWLLRPAGVPEGFAVSNGRIE
                     ATEVDIASKIAGRIDTILVKEGQFVREGEVLAKMDTRVLQEQRLEAIAQIKEAQSAVA
                     AAQALLEQRQSETRAAQSLVNQRQAELDSVAKRHMRSRSLAQRGAISAQQLDDDRAAA
                     ESARAALESAKAQVSASKAAIEAARTNIIQAQTRVEAAQATERRIAADIDDSELKAPR
                     DGRVQYRVAEPGEVLAAGGRVLNMVDLSDVYMTFFLPTEQAGTLKLGGEARLILDAAP
                     DLRIPATISFVASVAQFTPKTVETSDERLKLMFRVKARIPPELLQQHLEYVKTGLPGV
                     AWVRVNEELPWPDDLVVRLPQ"
     gene            1620..4355
                     /gene="rbbA"
                     /locus_tag="JN001_001520"
     CDS             1620..4355
                     /gene="rbbA"
                     /locus_tag="JN001_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated ATPase/putative transporter
                     RbbA"
                     /protein_id="HAY9052790.1"
                     /translation="MTHLELVPVPPVAQLAGVSQHYGKTVALNNITLDIPARCMVGLI
                     GPDGVGKSSLLSLISGARVIEQGNVMVLGGDMRDPKHRRDVCPRIAWMPQGLGKNLYH
                     TLSVYENVDFFARLFGHDKAEREVRINELLTSTGLAPFRDRPAGKLSGGMKQKLGLCC
                     ALIHDPELLILDEPTTGVDPLSRAQFWDLIDSIRQRQSNMSVLVATAYMEEAERFDWL
                     VAMNAGEVLATGSAEELRQQTQSATLEEAFINLLPQAQRQAHQAVVIPPYQPENAEIA
                     IEARDLTMRFGSFVAVDHVNFRIPRGEIFGFLGSNGCGKSTTMKMLTGLLPASEGEAW
                     LFGQPVDPKDIDTRRRVGYMSQAFSLYNELTVRQNLELHARLFHIPEAEIPARVAEMS
                     ERFKLNDVEDVLPESLPLGIRQRLSLAVAVIHRPEMLILDEPTSGVDPVARDMFWQLM
                     VDLSRQDKVTIFISTHFMNEAERCDRISLMHAGKVLASGTPQELVEKRGAASLEEAFI
                     AYLQEAAGQSNEAEAPPVVHDTTHAPRQGFSLRRLFSYSRREALELRRDPVRSTLALM
                     GTVILMLIMGYGISMDVENLRFAVLDRDQTVSSQAWTLNLSGSRYFIEQPPLTSYDEL
                     DRRMSAGDITVAIEIPPNFGRDIARGTPVELGVWIDGAMPSRAETVKGYVQAMHQSWL
                     QDVASRQSTPASQSGLMNIETRYRYNPDVKSLPAIVPAVIPLLLMMIPSMLSTLSVVR
                     EKELGSIINLYVTPTTRSEFLLGKQLPYIALGMLNFFLLCGLSVFVFGVPHKGSFLTL
                     TLAALLYIIIATGMGLLISTFMKSQIAAIFGTAIITLIPATQFSGMIDPVASLEGPGR
                     WIGEVYPTSHFLTIARGTFSKALDLTDMWQLFIPLLIAIPLVMGLSILLLKKQEG"
     gene            4355..5479
                     /locus_tag="JN001_001521"
     CDS             4355..5479
                     /locus_tag="JN001_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709253.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-2 transporter permease"
                     /protein_id="HAY9052791.1"
                     /translation="MRHLRNIFNLGIKELRSLLGDKAMLTLIVFSFTVSVYSSATVTP
                     GSLNLAPIAIADMDQSQLSNRIVNSFYRPWFLPPEMITADEMDAGLDAGRYTFAINIP
                     PNFQRDVLAGRQPDIQVNVDATRMSQAFTGNGYIQNIINGEVNSFVARYRDNSEPLVS
                     LETRMRFNPNLDPAWFGGVMAIINNITMLAIVLTGSALIREREHGTVEHLLVMPITPF
                     EIMMAKIWSMGLVVLVVSGLSLVLMVKGVLGVPIEGSIPLFMLGVALSLFATTSIGIF
                     MGTIARSMPQLGLLVILVLLPLQMLSGGSTPRESMPQMVQDIMLTMPTTHFVSLAQAI
                     LYRGAGFEIVWPQFLTLMAIGGAFFTIALLRFRKTIGTMA"
     gene            5552..5827
                     /locus_tag="JN001_001522"
     CDS             5552..5827
                     /locus_tag="JN001_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
                     /protein_id="HAY9052792.1"
                     /translation="MRTKVQALRKKQKNTLDQIFKTPVPQGIKWSDIESLVKALGGEI
                     KEGRGSRCKFILNMSVACFHRPHPSPDTDKGAVESVRDWLLSIGVKP"
     gene            5824..6183
                     /locus_tag="JN001_001523"
     CDS             5824..6183
                     /locus_tag="JN001_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicB family
                     antitoxin"
                     /protein_id="HAY9052793.1"
                     /translation="MIKLKTPNSMEIAGQPAVITYVPELNAFRGKFLGLSGYCDFVSD
                     SIQGLQKEGELSLLEYLEDCKAAGIEPYARTEKIKTFTLRYPESLSERLNNAAAQQQV
                     SVNTYIIETLNERLNHL"
     gene            complement(6303..6704)
                     /gene="nikR"
                     /locus_tag="JN001_001524"
     CDS             complement(6303..6704)
                     /gene="nikR"
                     /locus_tag="JN001_001524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel-responsive transcriptional regulator
                     NikR"
                     /protein_id="HAY9052794.1"
                     /translation="MQRVTITLDDDLLETLDSLSQRRGYNNRSEAIRDILRSALAQEA
                     TQQHGTQGFAVLSYVYEHEKRDLASRIVSTQHHHHDLSVATLHVHINHDDCLEIAVLK
                     GDMGDVQHFADDVIAQRGVRHGHLQCLPKED"
     gene            complement(6710..7516)
                     /gene="nikE"
                     /locus_tag="JN001_001525"
     CDS             complement(6710..7516)
                     /gene="nikE"
                     /locus_tag="JN001_001525"
                     /EC_number="7.2.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikE"
                     /protein_id="HAY9052795.1"
                     /translation="MTLLNVSGLSHHYAHGGFSGKHQHQAVLNNVSLTLKSGETVALL
                     GRSGCGKSTLARLLVGLESPSQGNISWRGESLAKLNRAQRKAFRRDIQMVFQDSISAV
                     NPRKTVREILREPMRHLLSLKKSEQLARASEMLKAVDLDDSVLDKRPPQLSGGQLQRV
                     CLARALAVEPKLLILDETVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERF
                     CQRVMVMDNGQIVETQAVGDKLTFSSDAGRVLQNAVLPAFPVRRRATEKV"
     gene            complement(7513..8277)
                     /gene="nikD"
                     /locus_tag="JN001_001526"
     CDS             complement(7513..8277)
                     /gene="nikD"
                     /locus_tag="JN001_001526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel import ATP-binding protein NikD"
                     /protein_id="HAY9052796.1"
                     /translation="MPQQIELRNIALQAAQPLVHGVSLTLQRGRVLALVGGSGSGKSL
                     TCAATLGILPAGVRQTAGEILADGKAVYPCALRGIKIATIMQNPRSAFNPLHTMHTHA
                     RETCLALGKPADDATLTAAIEAVGLENAARVLKLYPFEMSGGMLQRMMIAMAVLCESP
                     FIIADEPTTDLDVVAQARILDLLESIMQKQAPGMLLVTHDMGVVARLADDVAVMSQGK
                     IVEQGDVETLFNAPKHTVTRSLVSAHLALYGMELAS"
     gene            complement(8277..9110)
                     /gene="nikC"
                     /locus_tag="JN001_001527"
     CDS             complement(8277..9110)
                     /gene="nikC"
                     /locus_tag="JN001_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikC"
                     /protein_id="HAY9052797.1"
                     /translation="MNFFLSSRWSVRLALIIIALLALIALTSQWWLPYDPQAIDLPSH
                     LLSPDAQHWLGTDHLGRDIFSRLMAATRVSLGSVMACLLLVLTLGLVIGGSAGLIGGR
                     VDQATMRVADMFMTFPTSILSFFMVGVLGTGLTNVIIAIALSHWAWYARMVRSLVISL
                     RQREFVLASRLSGAGHVRVFVDHLAGAVIPSLLVLATLDIGHMMLHVSGMSFLGLGVT
                     APTAEWGVMINDARQYIWTQPLQMFWPGLALFISVMAFNLVGDALRDHLDPHLVTEHA
                     H"
     gene            complement(9107..10051)
                     /gene="nikB"
                     /locus_tag="JN001_001528"
     CDS             complement(9107..10051)
                     /gene="nikB"
                     /locus_tag="JN001_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter permease subunit NikB"
                     /protein_id="HAY9052798.1"
                     /translation="MLRYVLRRFLLLIPMVLAASVIIFLMLRLGTGDPALDYLRLSNL
                     PPTPEMLASTRTMLGLDQPLYVQYGTWLWKALHLDFGISFASQRPVLDDMLNFLPATL
                     ELAGAALVLILLTSVPLGIWAARHRDRLPDFAVRFIAFLGVSMPNFWLAFLLVMAFSV
                     YLQWLPAMGYGGWQHIILPAVSIAFMSLAINARLLRASMLDVAGQRHVTWARLRGLND
                     KQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV
                     IQCFTLMMVVVFVVCNLIVDLLNAALDPRIRRHEGAHA"
     gene            complement(10051..11625)
                     /gene="nikA"
                     /locus_tag="JN001_001529"
     CDS             complement(10051..11625)
                     /gene="nikA"
                     /locus_tag="JN001_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel ABC transporter, nickel/metallophore
                     periplasmic binding protein"
                     /protein_id="HAY9052799.1"
                     /translation="MLSTLRRTLFALLACASFIVHAAAPDEITTAWPVNVGPLNPHLY
                     TPNQMFAQSMVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKLSNGEPFD
                     AEAAAENFRAVLDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRP
                     FRFIAPSQFKNHETMNGIKAPIGTGPWILQESKLNQYDVFVRNENYWGEKPAIKKITF
                     NVIPDPTTRAVAFETGDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALN
                     TAKTPTNELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDP
                     QKAKALLEKAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGAD
                     VSLIGEEESSIYARQRDGRFGMIFHRTWGAPYDPHAFLSSMRVPSHADFQAQQGLADK
                     PLIDKEIGEVLATHDETQRQALYRDILTRLHDEAVYLPISYISMMVVSKPELGNIPYA
                     PIATEIPFEQIKPVKP"
     gene            complement(11736..12323)
                     /gene="acpT"
                     /locus_tag="JN001_001530"
     CDS             complement(11736..12323)
                     /gene="acpT"
                     /locus_tag="JN001_001530"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4'-phosphopantetheinyl transferase AcpT"
                     /protein_id="HAY9052800.1"
                     /translation="MYRIVLGKVSTLSAAPLPPGLREQAPQGPRRERWLAGRALLSHT
                     LSPLPEIIYGEQGKPAFAPETPLWFNLSHSGDDIALLLSDEGEVGCDIEVIRPRANWR
                     WLANAVFSLGEHAEMDAVHPDQQLEMFWRIWTRKEAIVKQRGGSAWQIVSVDSTYHSS
                     LSVSHCQLENLSLAICTPTPFTLTADSVQWIDSVN"
     gene            complement(12378..13414)
                     /locus_tag="JN001_001531"
                     /pseudo
     CDS             complement(12378..13414)
                     /locus_tag="JN001_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709244.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
     gene            13546..14763
                     /locus_tag="JN001_001532"
     CDS             13546..14763
                     /locus_tag="JN001_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417930.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052801.1"
                     /translation="MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYV
                     HDVMGFSAFWAGLVISLQYFATLLSRPHAGRYADLLGPKKIVVFGLCGCFLSGLGYLT
                     AGLTASLPVISLLLLCLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
                     GAMAMGAPLGVVFYHWGGLQALALIIMGVALVAILLAIPRPTVKASKGKPLPFRAVLG
                     RVWLYGMALALASAGFGVIATFITLFYDAKSWDGAAFALTLFSCAFVGTRLLFPNGIN
                     RIGGLNVAMICFSVEIIGLLLVGVATMPWMAKIGVLLAGAGFSLVFPALGVVAVKAVP
                     QQNQGAALATYTVFMDLSLGVTGPLAGLVMSWAGVPVIYLAAAGLVAIALLLTWRLKK
                     RPPEHVPEAASSS"
     gene            complement(14767..15324)
                     /gene="dcrB"
                     /locus_tag="JN001_001533"
     CDS             complement(14767..15324)
                     /gene="dcrB"
                     /locus_tag="JN001_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417929.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage sensitivity protein DcrB"
                     /protein_id="HAY9052802.1"
                     /translation="MRNLVKYVGIGLLVMGLAACDDKDTNATAQGSVAENNATGNPVN
                     LLDGKLSFSLPADMTDQSGKLGTQANNMHVWSDATGQKAVIVIMGDDPKEDLAVLAKR
                     LEDQQRSRDPQLQVVTNKAIELKGHKMQQLDSIISAKGQTAYSSVILGNVGNQLLTMQ
                     ITLPADDQQKAQTTAENIINTLVIQ"
     gene            complement(15397..16062)
                     /locus_tag="JN001_001534"
     CDS             complement(15397..16062)
                     /locus_tag="JN001_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-cyano-7-deazaguanine/7-aminomethyl-7-
                     deazaguanine transporter"
                     /protein_id="HAY9052803.1"
                     /translation="MNVFSQTQRYKALFWLSLFHLLVITSSNYLVQLPVSILGFHTTW
                     GAFSFPFIFLATDLTVRIFGAPLARRIIFAVMIPALLISYVISSLFYMGSWQGFGALA
                     HFNLFVARIATASFMAYALGQILDVHVFNRLRQSRRWWLAPTASTLFGNVSDTLAFFF
                     IAFWRSPDAFMAEHWMEIALVDYCFKVLISIVFFLPMYGVLLNMLLKRLADKSEINAL
                     QAS"
     gene            16283..16528
                     /gene="tusA"
                     /locus_tag="JN001_001535"
     CDS             16283..16528
                     /gene="tusA"
                     /locus_tag="JN001_001535"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA"
                     /protein_id="HAY9052804.1"
                     /translation="MTDLFSSPDHTLDALGLRCPEPVMMVRKTVRNMQPGETLLIIAD
                     DPATTRDIPGFCTFMEHELVAKETDGLPYRYLIRKGG"
     gene            complement(16630..18828)
                     /gene="zntA"
                     /locus_tag="JN001_001536"
     CDS             complement(16630..18828)
                     /gene="zntA"
                     /locus_tag="JN001_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(II)/Cd(II)/Pb(II) translocating P-type ATPase
                     ZntA"
                     /protein_id="HAY9052805.1"
                     /translation="MSTPDNHGKKAPQFAAFKPLTTVQNANDCCCDGACSSSPTLSEN
                     VSGTRYSWKVSGMDCAACARKVENAVRQLAGVNQVQVLFATEKLVVDADNDIRAQVES
                     AVQKAGYSLRDEQAADEPQASRLKENLPLITLIVMMAISWGLEQFNHPFGQLAFIATT
                     LVGLYPIAHQALRLIKSGSYFAIETLMSVAAIGALFIGATAEAAMVLLLFLIGERLEG
                     WAASRARQGVSALMALKPETATRLRNGEREEVAINSLRPGDVIEVAAGGRLPADGKLL
                     SPFASFDESALTGESIPVERATGDKVPAGATSVDRLVTLEVLSEPGASAIDRILKLIE
                     EAEERRAPIERFIDRFSRIYTPAIMAVALLVTLVPPLLFAASWQEWIYKGLTLLLIGC
                     PCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTQVAFDKTGTLTVGKPRVTA
                     IHPATGISESELLTLAAAVEQSATHPLAQAIVREAQVAALAIPAAESQRALVGSGIEA
                     QVNGERVLICAAGKHPADAFAGLINELESAGQTVVLVVRNDDVLGIIALQDTLRADAA
                     TAISELNALGVKGVILTGDNPRAAAAIAGELGLEFKAGLLPEYKVKAVTELNQHAPLA
                     MVGDGINDAPAMKAAAIGIAMGSGTDVALETADAALTHNHLRGLVQMIELARATHANI
                     RQNITIALGLKGIFLVTTLLGMTGLWLAVLADTGATVLVTANALRLLRRR"
     gene            complement(18902..19528)
                     /locus_tag="JN001_001537"
     CDS             complement(18902..19528)
                     /locus_tag="JN001_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000964717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysoplasmalogenase"
                     /protein_id="HAY9052806.1"
                     /translation="MLWSFIAVCLSAWLSVDASYRGPTWQRWVFKPLTLLLLLLLAWQ
                     APMFDAISYLVLAGLCASLLGDALTLLPRQRLMYAIGAFFLSHLLYTIYFASQMTLSF
                     FWPLPLVLLVLGALLLAIIWTRLEEYRWPICTFIGMTLVMVWLAGELWFFRPTAPALS
                     AFVGASLLFISNFVWLGSHYRRRFRADNAIAAACYFAGHFLIVRSLYF"
     gene            19669..20028
                     /locus_tag="JN001_001538"
     CDS             19669..20028
                     /locus_tag="JN001_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2500 domain-containing protein"
                     /protein_id="HAY9052807.1"
                     /translation="MSKPPLFFIVIIGLIVVAASFRFMQQRREKADNDMAPLQQKLVV
                     VSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDK
                     GTLSYKGTRFVSFVGEQ"
     gene            complement(20031..20300)
                     /locus_tag="JN001_001539"
     CDS             complement(20031..20300)
                     /locus_tag="JN001_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1145 family protein"
                     /protein_id="HAY9052808.1"
                     /translation="MLINIGRLLMLCVWGFLILNLVHPFPRPLNIFVNVALIFTVLMH
                     GMQLALLKSTLPKDGPQMTTAEKVRIFLFGVFELLVWQKKFKVKK"
     gene            complement(20290..20886)
                     /gene="rsmD"
                     /locus_tag="JN001_001540"
     CDS             complement(20290..20886)
                     /gene="rsmD"
                     /locus_tag="JN001_001540"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase"
                     /protein_id="HAY9052809.1"
                     /translation="MKKPNHSGSGQIRIIGGQWRGRKLPVPDSLGLRPTTDRVRETLF
                     NWLAPVIVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGN
                     ARVVNSNAMSFLAQKGTPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVESEV
                     ENGLPTVPANWSLHREKVAGQVAYRLYQREAQGESDAD"
     gene            21036..22529
                     /gene="ftsY"
                     /locus_tag="JN001_001541"
     CDS             21036..22529
                     /gene="ftsY"
                     /locus_tag="JN001_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HAY9052810.1"
                     /translation="MAKEKKRGFFSWLGFGQKEQTPEKETEVQNEQPVVEEIVQAQEP
                     AKASEQAVEEQPQAHTEAEAETFAADVVEVTEQVAESEKAQPEAEVVAQPEPVVEETP
                     EPVAIEREELPLPEDVNAEEVSPEEWQAEAETVEIVEAAEEEAAKEEITDEELEAQAL
                     AAEAAEEAVMVVPPVEEQPVEEIAQEQEKPTKEGFFARLKRSLLKTKENLGSGFISLF
                     RGKKIDDDLFEELEEQLLIADVGVETTRKIITNLTEGASRKQLRDAEALYGLLKEEMG
                     EILAKVDEPLNVEGKTPFVILMVGVNGVGKTTTIGKLARQFELQGKSVMLAAGDTFRA
                     AAVEQLQVWGQRNNIPVIAQHTGADSASVIFDAIQAAKARNIDVLIADTAGRLQNKSH
                     LMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGITLTKLDG
                     TAKGGVIFSVADQFGIPIRYIGVGERIEDLRPFKADDFIEALFARED"
     gene            22532..23200
                     /gene="ftsE"
                     /locus_tag="JN001_001542"
     CDS             22532..23200
                     /gene="ftsE"
                     /locus_tag="JN001_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HAY9052811.1"
                     /translation="MIRFEHVSKAYLGGRQALQGVTFHMQPGEMAFLTGHSGAGKSTL
                     LKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLMDRTVYDNVAI
                     PLIIAGASGDDIRRRVSAALDKVGLLDKAKNFPIQLSGGEQQRVGIARAVVNKPAVLL
                     ADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDINLISRRSYRMLTLSDGHLHGG
                     VGHE"
     gene            23193..24251
                     /gene="ftsX"
                     /locus_tag="JN001_001543"
     CDS             23193..24251
                     /gene="ftsX"
                     /locus_tag="JN001_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsX"
                     /protein_id="HAY9052812.1"
                     /translation="MNKRDAINHIRQFGGRLDRFRKSVGGSGDGGRNAPKRAKSSPKP
                     VNRKTNVFNEQVRYAFHGALQDLKSKPFATFLTVMVIAISLTLPSVCYMVYKNVNQAA
                     TQYYPSPQITVYLQKTLDDDAAAGVVAQLQAEQGVEKVNYLSREDALGEFRNWSGFGG
                     ALDMLEENPLPAVAVVIPKLDFQGTESLNTLRDRITQINGIDEVRMDDSWFARLAALT
                     GLVGRVSAMIGVLMVAAVFLVIGNSVRLSIFARRDSINVQKLIGATDGFILRPFLYGG
                     ALLGFSGALLSLILSEILVLRLSSAVAEVAQVFGTNFDINGLSFDECLLLLLVCSMIG
                     WVAAWLATVQHLRHFTPE"
     gene            24496..25350
                     /gene="rpoH"
                     /locus_tag="JN001_001544"
     CDS             24496..25350
                     /gene="rpoH"
                     /locus_tag="JN001_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007899894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HAY9052813.1"
                     /translation="MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYH
                     GDLEAAKTLILSHLRFVVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLV
                     SFAVHWIKAEIHEYVLRNWRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARE
                     LGVTSKDVREMESRMAAQDMTFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWE
                     EQAANRLTDAMQGLDERSQDIIRARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMK
                     KLRAAIEA"
     gene            25621..26724
                     /locus_tag="JN001_001545"
     CDS             25621..26724
                     /locus_tag="JN001_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HAY9052814.1"
                     /translation="MNIKGKALLAGCIALAFSNMALAEDIKVAVVGAMSGPVAQYGDQ
                     EFTGAEQAVADINAKGGIKGNKLQIVKYDDACDPKQAVAVANKVVNDGIKYVIGHLCS
                     SSTQPASDIYEDEGILMITPAATAPELTARGYQLILRTTGLDSDQGPTAAKYILEKVK
                     PQRIAIVHDKQQYGEGLARAVQDGLKKGNANVVFFDGITAGEKDFSTLVARLKKENID
                     FVYYGGYHPEMGQILRQARAAGLKTQFMGPEGVANVSLSNIAGESAEGLLVTKPKNYD
                     QVPANKPIVDAIKAKKQDPSGAFVWTTYAALQSLQAGLNQSDDPAEIAKYLKANSVDT
                     VMGPLTWDEKGDLKGFEFGVFDWHANGTATDAK"
     gene            complement(26923..27306)
                     /gene="panM"
                     /locus_tag="JN001_001546"
     CDS             complement(26923..27306)
                     /gene="panM"
                     /locus_tag="JN001_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase autocleavage activator
                     PanM"
                     /protein_id="HAY9052815.1"
                     /translation="MKLTIIRLENFSDQDRIDLQKIWPEYSPSSLQVDDNHRIYAARF
                     NERLLAAVRVTLSGTEGALDSLRVREVTRRRGVGQYLLEEVLRNNPGVSCWWMADAGV
                     EDRGVMTAFMQALGFTAQQGGWEKR"
BASE COUNT         6475 a         7172 c         7675 g         6191 t
ORIGIN      
        1 aacggggaca gttttaggtc ttaacgcccg tgacagtaaa catgctggaa gaatgttcag
       61 catgcataat tgccaaatta accctggtgc agggcctgag ataaccactc cctggaagtc
      121 ttaccagcat gaaaaaaaca gaaatggact tatgcctttg attagaaggc gcacaatgtt
      181 acagctctga accatagaca acatgaatat taatgttact atctggttga gactgttgat
      241 aaaacgtaaa aaggaatgct ctgttcctgc aactgaacag gcgtgaaacg cgatccaaca
      301 ggatggatac cgttttgtca gccagtttta tagatcacac ttatgagtat gcgtgtttca
      361 tttacggcca ggaatgctga tgatgacaac attactaccc gttttcacta agccttcccc
      421 gttggcgctc aatgctctgc gcgctggtcg tatttgtcgt ttccttctta tcccggatgg
      481 aagaatccgc tgaacgtcgt tcggcggcag ttgtaacacg cgtcgtttgc ttacagggat
      541 tatggcgggc cgattatgga taagagtaag cgccatctgg cgtggtgggt tgtcggggca
      601 ctggcggtgg ctgccgtcgt ggcgtggtgg ctgttgcgcc cggcgggtgt gccggaaggc
      661 tttgctgtca gcaatgggcg cattgaagcg acggaagtgg atatcgccag caaaattgcc
      721 gggcgtatcg acaccattct ggtgaaagaa ggccagtttg ttcgcgaagg tgaagtgctg
      781 gcgaagatgg atactcgtgt gttgcaggaa cagcgactgg aagccatcgc gcaaatcaaa
      841 gaggcacaaa gcgccgttgc cgccgcgcag gctttgctgg agcaacgaca aagcgaaact
      901 cgcgccgcgc agtcgctggt taatcaacgc caggcagaac tggactccgt agcaaaacgt
      961 catatgcgtt cccgttcact ggcccaacga ggggctattt ctgcgcaaca gctggatgac
     1021 gaccgcgccg ccgctgagag cgcccgagct gcgctggaat cggcaaaagc tcaggtttct
     1081 gcttctaaag ccgctataga ggcggcacgt accaatatca ttcaggcgca aacccgcgtc
     1141 gaagcggcac aagccactga acggcgcatt gccgcagata tcgatgacag cgaactgaaa
     1201 gccccgcgtg acggacgcgt gcagtatcgg gttgccgagc caggggaagt gctggcggca
     1261 ggcggtcggg tgctgaatat ggtcgatctc agcgacgtct atatgacttt cttcctgcca
     1321 accgaacagg cgggcacgct aaaactgggc ggtgaagcac ggctgatcct cgatgccgcg
     1381 ccagatctgc gtattccggc gaccatcagt tttgtcgcca gcgtcgccca gttcacgcca
     1441 aaaaccgtcg aaaccagcga tgaacggctg aaactgatgt tccgcgtcaa agcgcgtatc
     1501 ccaccggaat tactccagca gcatctggaa tatgtcaaaa cgggcttgcc gggcgtagcg
     1561 tgggtgcggg tgaatgaaga acttccgtgg cctgacgacc tggtggtgag gttgccgcaa
     1621 tgacgcatct ggaactggtt cccgtcccgc ctgtcgcgca actggcgggc gtgagccagc
     1681 attatggaaa aaccgttgcg ctgaacaata tcactctcga tattccggcc cgctgtatgg
     1741 tcgggctgat tggcccggac ggcgtcggga agtcgagttt gttgtcgttg atttccggtg
     1801 ctcgtgtcat tgagcagggc aatgtgatgg tgctgggcgg cgatatgcgc gacccgaagc
     1861 atcgccgcga cgtctgcccg cgcatcgcct ggatgccgca ggggctgggc aaaaacctct
     1921 accacacctt gtcggtgtat gaaaacgtcg attttttcgc ccgcctgttc ggtcacgaca
     1981 aagcggagcg ggaagtgcga attaatgagc tgctgaccag cacggggtta gcaccgtttc
     2041 gcgatcgtcc ggcagggaaa ctctccggtg ggatgaagca aaaacttggg ctgtgctgcg
     2101 cgttaatcca cgacccggaa ctgttgatcc ttgatgagcc aacaacgggg gttgacccgc
     2161 tctcccgcgc ccagttctgg gatctgatcg acagtattcg ccagcggcag agcaatatga
     2221 gcgtgctggt cgccaccgcc tatatggaag aggccgaacg cttcgactgg ctggtagcga
     2281 tgaatgccgg agaagtgctg gcaaccggca gcgccgaaga gctgcggcag caaacgcaaa
     2341 gcgccacgct ggaagaagca tttattaatc tgttaccgca agcgcaacgc caggcgcatc
     2401 aggcggtagt gatcccaccg tatcaacctg aaaacgcaga gattgccatc gaagcgcgcg
     2461 atctgaccat gcgttttggt tccttcgttg ccgttgatca cgtcaatttc cgcattccac
     2521 gcggggagat ttttggattc cttggttcga acggctgcgg taaatccacc accatgaaaa
     2581 tgcttaccgg actgctgccc gccagcgaag gtgaggcgtg gctatttggg caaccggttg
     2641 atccaaaaga tatcgatacc cgccgtcgtg tgggctatat gtcgcaggcg ttttcgctct
     2701 ataacgaact caccgtgcgg caaaacctgg agttacatgc ccgtttgttt cacatcccgg
     2761 aagcggaaat tcccgcgcga gtggctgaaa tgagcgagcg ttttaagctc aacgacgttg
     2821 aagatgttct gccggagtca ttgccgctcg gcattcgcca gcggctttcg ctggcggtgg
     2881 cggtgattca tcgcccggag atgttaatcc tcgatgagcc tacttctggt gtcgatccgg
     2941 tggcgaggga tatgttctgg cagttgatgg tcgatctctc gcgccaggac aaagtgacta
     3001 tcttcatctc cacccacttt atgaacgaag cggaacgttg cgaccgcatc tcactgatgc
     3061 acgccggaaa agtgcttgcc agcggtacac cgcaggaact ggttgagaaa cgcggagccg
     3121 ccagtctgga agaggcattt atcgcctatt tgcaggaagc ggcagggcag agcaacgaag
     3181 ccgaagcgcc gcccgtggta cacgacacca cccacgcgcc gcgtcaggga tttagcctgc
     3241 gccgtctgtt tagctacagc cgccgcgaag cgctggaact gcgacgcgat ccagtacgtt
     3301 cgacgctggc gctgatggga acggtgatcc tgatgctgat aatgggttac ggcatcagta
     3361 tggatgtgga aaacctgcgc tttgcggtgc tcgaccgcga ccagaccgtc agtagccagg
     3421 cgtggacact caacctctcc ggttcccgtt actttatcga acagccgccg ctcaccagtt
     3481 atgacgagct tgatcgtcgg atgagtgcgg gcgatatcac ggtggcgatt gagatcccgc
     3541 ccaatttcgg gcgcgatatc gcgcgtggta cgcctgtgga actcggcgtc tggatcgacg
     3601 gagcgatgcc cagtcgtgcc gaaacggtaa aaggttacgt gcaggcaatg caccagagtt
     3661 ggcttcagga tgtggcgagc cgacaatcga cacccgccag ccaaagcggg ctgatgaaca
     3721 ttgagacgcg ttatcgctat aacccggacg taaaaagcct gccagcaatt gttccggcgg
     3781 tgatcccgct tctgctgatg atgatcccgt caatgctaag cacccttagc gtggtgcggg
     3841 aaaaagagct tgggtcgatt atcaaccttt acgtgacccc caccacgcgt agtgaatttt
     3901 tgcttggtaa acagttgcca tacatcgcgc tggggatgct gaactttttc ctgctctgcg
     3961 gcctgtcggt gtttgtgttt ggcgtaccgc ataaaggcag tttcctgacg ctcaccctgg
     4021 cggcgctgct gtatatcatc attgccaccg gaatggggct gctgatctcc acctttatga
     4081 aaagccagat tgccgccatt ttcggaacgg cgattatcac gttgatcccg gcgacacagt
     4141 tttccgggat gatcgatccg gtagcttcgc tggaagggcc tggacgttgg atcggcgagg
     4201 tttacccgac cagtcatttt ctgactatcg cccgcgggac gttctcgaaa gcgctggatc
     4261 tgactgatat gtggcaactt tttatcccgt tgctgatagc catcccgctg gtgatgggct
     4321 taagtatcct gctgctgaaa aaacaggagg gatgatgcgc catttacgca atatttttaa
     4381 tctgggtatc aaagagttgc gcagtctgct cggtgataaa gcgatgctga cgctgattgt
     4441 cttctcgttt acggtgtcgg tgtattcgtc agcgaccgtt acgccaggat cgttgaacct
     4501 cgcgccgatc gccattgccg atatggatca atcgcagtta tcgaaccgga tcgttaacag
     4561 cttctatcgt ccgtggtttt tgccaccgga gatgatcacc gccgatgaga tggatgccgg
     4621 actggacgcc ggacgctata ccttcgcgat aaatattccg cctaattttc agcgtgatgt
     4681 cctcgccgga cgccagccgg atattcaggt gaacgtcgat gccacgcgca tgagccaggc
     4741 atttaccggc aatgggtata tccagaatat tatcaacggt gaagtgaaca gctttgtcgc
     4801 gcgctaccgt gataacagcg aaccgttggt atcgctggaa acccggatgc gctttaaccc
     4861 gaaccttgat cccgcgtggt ttggcggggt gatggcgatc atcaacaaca ttaccatgct
     4921 ggcgattgta ttgaccggat cggcgctgat ccgcgagcgt gaacacggca cggtggaaca
     4981 cttactggtg atgccgataa cgccgtttga gatcatgatg gcgaagatct ggtcgatggg
     5041 gctggtggtg ctggtggtat cgggattatc gctggtgctg atggtgaaag gtgtactggg
     5101 cgtaccgatt gaaggctcga tcccgctgtt tatgctgggc gtggcgctca gtctgtttgc
     5161 caccacgtca atcggcattt ttatggggac gatagcgcgt tcaatgccgc aactggggct
     5221 gctggtgatt ctggtgctgc tgccgctgca aatgctttcc ggtggatcca cgccgcgcga
     5281 aagtatgccg cagatggtgc aggacattat gctgaccatg ccgacgacac actttgttag
     5341 cctcgcgcag gccattctct accggggtgc cggattcgaa atcgtctggc cgcagttcct
     5401 gacgctgatg gcaattggcg gcgcgttttt caccattgcg ctgctgcgat tcaggaagac
     5461 gattgggaca atggcgtaag gaagggaaac ttgacttcat actgtgatgt catactattg
     5521 atgtcataaa gtgaagtcat aaggacatgc catgagaacc aaggtacagg ctttacggaa
     5581 gaaacaaaaa aatacattgg atcaaatatt taaaactcct gttcctcaag ggatcaagtg
     5641 gtctgatata gagtcactgg ttaaagcatt aggcggagaa attaaggaag gaagaggttc
     5701 gcgttgtaag ttcatactaa atatgagcgt tgcgtgtttc catcggcctc atccgtcgcc
     5761 agataccgat aaaggcgctg tagaaagcgt gcgtgactgg ttactaagta taggggtaaa
     5821 accatgatca aactgaagac gccaaactct atggagattg ccgggcaacc agctgttatt
     5881 acctacgtgc cagaactgaa tgcatttcgt ggcaaattcc tgggcttgtc aggttattgt
     5941 gattttgtct ctgacagcat tcaggggctg caaaaagaag gggaactttc cctgctagag
     6001 tatcttgagg attgtaaagc tgcgggtatt gagccgtatg cgcgtacaga aaagattaag
     6061 acctttacgt tacgctatcc agaatcgctg agtgaacgcc ttaataatgc ggctgcgcag
     6121 caacaagtct ctgttaatac ctatattatt gaaacactga atgagcgttt gaatcattta
     6181 taaattttag cggcgtacat tacgcagaat atctgccttt acaggatcta tctatgcaac
     6241 tgaacttaat tttataaatt aagttcagtt aatatctttt ctttcctcgt ttcagaaata
     6301 actcaatctt ccttcggcaa gcactgcaaa tgcccatgcc gcacgccgcg ctgggcgata
     6361 acgtcatcgg caaaatgctg cacgtcgccc atatcacctt tcagcacggc gatttccaga
     6421 cagtcgtcgt gattgatatg cacatgcagc gtggcgacgg agagatcgtg gtgatggtgc
     6481 tgggtggaga caatgcggct ggctaagtcg cgtttttcgt gttcatacac ataggagagc
     6541 accgcgaaac cttgcgtgcc gtgctgctga gtggcctcct gggccagggc gctacgcaga
     6601 atatcgcgga tagcttcgga acggttgtta taaccacgac gctggctcag gctgtccagc
     6661 gtctccagta aatcgtcatc aagcgtgatg gtgactcgtt gcatttgcgt taaacctttt
     6721 ctgtggcgcg acggcgcacg gggaatgcgg gtaataccgc gttttgtagc acacgtccgg
     6781 cgtcagagga aaaggttaat ttatctccca ccgcctgggt ttcgacgatt tgtccgttgt
     6841 ccatcaccat cacccgctgg caaaagcgtt ctacaagacg taagtcgtgg gtgatgaaca
     6901 ggcaggcggt gccaaactgt tgttgcagct ttttcagcag gcgaatgacg cccgcctgta
     6961 acacgagatc aaggttagaa acggtttcat ccagaatcag caatttcggt tcgaccgcca
     7021 gcgcgcgtgc caggcagacg cgctggagct ggccgccgct taactgcggt gggcgtttgt
     7081 cgagaacgct gtcatcgaga tcgaccgcct tcagcatttc gctggcgcgc gccagttgtt
     7141 cggatttttt cagtgatagc aggtggcgca tcggttcacg caggatctcg cgcacggttt
     7201 tgcgcggatt cacggcactg atggagtcct gaaacaccat ctgaatatca cggcggaagg
     7261 ctttacgttg ggcgcgatta agtttcgcca gcgattcgcc gcgccagcta atattccctt
     7321 gtgagggaga ctctaagcct accagcagcc gcgcgagggt gctttttccg cagccgctgc
     7381 gtcccagcag ggcgacggtt tcgccgcttt tcagggtcag ggaaacgtta ttcagcaccg
     7441 cctgatgttg atgttttccg ctaaatccac cgtgggcata gtgatgggaa aggccgctga
     7501 cgttaagtaa ggtcatgatg ccagctccat accgtagagg gcgagatgag cggaaaccag
     7561 gctgcgcgtc accgtatgtt tgggggcgtt aaacagcgtt tctacatcgc cctgttcgac
     7621 aattttacct tgtgacatca ccgccacgtc atccgccaga cgcgccacaa cgcccatatc
     7681 atgggtgacc agcagcattc ccggcgcttg tttttgcata atgctttcca gcagatcgag
     7741 gatgcgcgcc tgtgctacca cgtcgaggtc ggtggtcggt tcatcggcga tgataaacgg
     7801 tgattcacac agcaccgcca tcgcaatcat catgcgctgc aacatgccgc cgctcatctc
     7861 gaacgggtac agcttcagca cgcgcgcggc gttttccagc cccaccgctt ctatggcagc
     7921 ggtaagcgta gcgtcatcgg cgggtttccc taacgccagg caggtttccc gcgcgtgggt
     7981 gtgcatggtg tgtagcggat taaaggcgct gcgcgggttc tgcatgatgg tggcaatttt
     8041 gatgccgcgc agggcgcagg gataaaccgc tttgccatcg gctaaaattt cccccgccgt
     8101 ctggcgaacg ccagcgggca aaatgcccag cgtcgcggcg caggttaatg atttcccgct
     8161 gccgctaccg ccgactaacg ccagcacgcg cccgcgttgc agggttaacg atacaccgtg
     8221 taccagcggc tgcgcggcct gtagcgcgat attacgtagt tcaatctgtt gcggcattag
     8281 tgtgcgtgct ccgtcaccag atgagggtcc agatgatcgc gcagtgcgtc acccaccagg
     8341 ttaaaggcca tcacgctgat aaacagcgcc agccccggcc agaacatttg cagcggctgg
     8401 gtccagatat actggcgcgc gtcgttaatc atcacgcccc attcggcggt cggcgcggtc
     8461 acaccgaggc caaggaaaga catccccgag acgtgcagca tcatatggcc gatatccagc
     8521 gttgccagca ccagcagcga agggatcacc gcgcctgcca gatgatcgac aaacactcgc
     8581 acatggcccg caccggaaag ccgtgacgcc agcacaaact cgcgttggcg tagtgaaatc
     8641 accaggctgc gcaccatgcg tgcataccac gcccagtgcg acagggcgat ggcgataatt
     8701 acgttggtca gcccggtgcc gagcacgcca accataaaga acgacagaat cgaggtcggg
     8761 aaggtcataa acatatcggc gacgcgcatg gtggcctgat caacgcgccc gccaatcaac
     8821 ccggcgctgc cgccaataac cagccctaat gtcagcacca gcagcaggca ggccattacc
     8881 gaaccgagcg acacgcgggt cgctgccatc agccgcgaga aaatatcgcg acctaagtga
     8941 tcggtgccca gccagtgctg cgcatccggc gaaagcaggt gcgacggcaa atcaatcgcc
     9001 tgggggtcat acggcagcca ccactggctg gtgagcgcaa tcagcgccag cagggcgata
     9061 atgatcagcg ccaggcgtac cgaccagcgg gaagagagga aaaagttcac gcgtgcgctc
     9121 cttcatgacg acgaatgcgc gggtccagcg cggcgttgag caaatcgaca atcaaattac
     9181 agaccacaaa aaccaccacc atcatcagcg taaagcactg aatcaccgga tagtcacggt
     9241 taaaaatcgc cgacaccgca tagcgcccga cgccaggcca ggcaaagatg ttttcgataa
     9301 tcatcgtccc gccaatcaat tcgccaatgt gcatccccac ggcggtgatc atcggcagcg
     9361 aggcattgcg cagaatatgg cggcgttcgg tctgtttgtc attcaggccg cgtagccgcg
     9421 cccaggtgac gtgacgctga ccggcgacgt ccagcatact ggcgcgcagc agtcgcgcgt
     9481 taatcgccag cgacataaag gcgatggaaa ccgcaggcaa aatgatgtgc tgccagccgc
     9541 cgtagcccat cgcgggtagc cattgcagat acaccgaaaa cgccatcact agcaaaaatg
     9601 ccagccagaa gttgggcatc gacacgccaa gaaacgcgat aaagcgcacg gcgaaatccg
     9661 gcaaacgatc gcggtggcgc gccgcccaga taccgagcgg tacggaagtg agcagaatta
     9721 ataccagcgc cgcacctgca agttccagcg tggcgggcag gaagttcagc atatcgtcca
     9781 gcaccgggcg ttggctggcg aatgagatac caaagtcaag atgcagcgcc ttccacaacc
     9841 aggtgccgta ctggacgtac agcggctgat ccagtccgag catggtgcgg gtagaggcca
     9901 gcatctccgg cgtcggcggc aggttagaca gacgcaaata atcgagcgcc gggtcgccgg
     9961 taccgaggcg cagcatcaga aaaatgatca ccgaggcggc gagcaccatc gggatcagca
    10021 gcagaaagcg gcgtaatacg taacgcaaca ttaaggtttc accggtttaa tctgttcgaa
    10081 cggaatttcg gtggcgatcg gcgcgtaggg gatgttaccc agctccggtt ttgataccac
    10141 catcattgag atgtaactga taggcagata aaccgcctcg tcatgcagac gggtcagaat
    10201 gtcgcgatac agtgcctgac gttgcgtttc gtcatgggtc gccagcactt cgccgatctc
    10261 tttatcaatc agcggtttgt cggctaatcc ttgctgtgcc tggaagtcag cgtgcgacgg
    10321 tacgcgcatt gaactcagga aggcgtgtgg atcgtatggc gcgccccagg tgcggtggaa
    10381 aatcatgcca aaacgaccgt cgcgctgacg agcatagata ctgctctctt cttcgccaat
    10441 cagcgagaca tctgcgccaa tctggcgcat atcagcctga atgatttccg ccatcgattt
    10501 gcttaacgca tcggtgccga tgaacgacag ttcaatgcgc agcggctgac catttttctc
    10561 gcggatgtct ttgcccgcag gcagcgtcca accggctttt tccagcaacg ctttcgcttt
    10621 ctgcggatcg tactggcgcg gtttcaggcc gaggttggcg tagggcacag aaggggcaaa
    10681 cagggtgtcg gcgacctgct gggtgccata caacgcgtta tcaatcagcg attttttgtt
    10741 taccgcgtaa ttaagagctt cacgtactgc cagctcattg gtgggggttt tggcggtatt
    10801 aagcgccagc atcacggttt cgatcggctg tgacagttgg gtatggtaag ccgggttctg
    10861 gctaaagcgg gcgaaggtat cgagcggtaa taacccttcg tttccgtaca gcaggtcgat
    10921 atcgccagtt tcaaacgcca ccgcgcgggt agtcgggtcc gggatgacgt taaaggtgat
    10981 ctttttaatc gctggctttt cgccccagta gttttcgtta cggacgaaga catcgtactg
    11041 attcagtttc gattcctgca aaatccacgg tccggtgcca atcggcgctt taattccgtt
    11101 catggtttca tggtttttaa actgcgaggg agcgataaaa cggaaaggac ggggcagggc
    11161 cagttcttgc aggaaaggat agtaggcgct tttcagggta atttgcagct ctgttttact
    11221 gagtgcttta acatcaacaa tctggtttgc cagctccagc caggcgtgac gttgacggtt
    11281 atcgagcact gcgcggaagt tttctgccgc cgcctcggca tcgaacggtt caccgttgga
    11341 taatttcacg tcatcacgca gggtgaaggt ccaggtttta ccatcttctg aatgagtcca
    11401 gctttttgcc agccacggga tcaccgaacc gtctgcctga tatttcacca atggttcata
    11461 aaccatgctc tgggcgaaca tctggttagg cgtgtaaagg tgcgggttta gtggcccgac
    11521 attcaccggc caggcggtag tgatttcatc tggtgcagcg gcatggacga taaaagacgc
    11581 acaagccagc agcgcaaata gagtgcggcg gagtgtggag agcatgataa ccccaatgga
    11641 ttaaaataga tggcggaaat aagtatgacg attttaagta ttcgtcatac tgattacctg
    11701 ttctggatca atagatgggc agtcgggtgg gcggatcagt taactgaatc gatccattgc
    11761 acactgtcgg cggtgagcgt aaagggggtg ggggtgcaga tcgcaaggct taaattttct
    11821 agctgacaat ggctgactga cagcgaggag tgataggtgc tatctacgct gacgatttgc
    11881 caggcgctgc cgccacgctg tttaacgatg gcttctttgc gcgtccagat gcgccagaac
    11941 atttccagtt gctgatcagg atgcacggcg tccatttcag cgtgttcccc gaggctgaac
    12001 acggcgttcg ccagccagcg ccagttggcg cgcgggcgaa tcacttcgat atcgcagccg
    12061 acttcgcctt catcgctcaa cagcagagcg atatcgtcac cgctatggct taagttgaac
    12121 catagcggcg tttccggcgc gaatgcaggt ttgccttgtt cgccatagat gatctccggt
    12181 agcggggaaa gcgtgtgcga aagcaatgca cgccccgcca gccagcgttc gcgtcgtgga
    12241 ccttgcggtg cttgctcgcg taaacccggt ggcagtggag ctgcgcttaa ggtcgaaact
    12301 ttccccagaa ctatccgata catatcaggg ccaacgttta atggaaaatg aaagtgcgta
    12361 tcgtatcact tgtcgcctca tcccggtaac cgacttttcg gtctgcctag ccccagtaaa
    12421 atcgccagtt tgctaccgcc tttggtggtt tccatccaga ttttacacac gctggttaat
    12481 ggcaccgaaa gtagcatccc taccgggccg agcagccatc cccaaattaa caatgaaaga
    12541 aataccacca tggtggacat ccccaggcga tggcccatca tccgtggtcg atgaccatat
    12601 ggaccactaa aaacaatgcg ccgaccagaa tacatgcgta aacaccatta aacagcagca
    12661 cctgaatcat tggcggtacg gcggaaatta ccgcgccgat attgggcacg tagttgagca
    12721 aaaacgccag tactgcccac atcagcgcaa actgtacgcc cattagcgcc agccccagcc
    12781 agacgatgac acctgtccat aaactgagta gcgtctttaa cgccagataa tgcgaaacgc
    12841 ctttaagtgc gcggtgtaat cctgcgatgt gaatctgtgg gttattcagc gcaaaacgca
    12901 ttttgtaagg gacgtggcgc acttcaaaca gcataaaaac tacggtcatc accagcaaaa
    12961 gcacgctcgc cattgccccg gaaagcccga tcattagcgc tgtggtgaag gtaaccactt
    13021 tttccgagtc catccgctgc agcattcgct ccggcgacat atgcaaatta agaaaaggca
    13081 acatctcctg caatttaaaa agtttgcgcg tcagctcctt attaaacttc ggcagcatag
    13141 agataaattc gttaaacgat gccgccagta cgccgactag cgcggttagt gcgatcagca
    13201 tcaccaccac tacaatcgta atggtaacgg ggcgttgtac tccccgacga ataaaccagg
    13261 taacgagcgg gttgaggacg atggcaaaaa acagcgccag taacagctgc acaatgatat
    13321 ctgccgctgc gtgaatgccc gcgaggatca ctaccagcga ggccaacttg agcagaatgt
    13381 gcatgcccgt tttatcgggt tgaggggttt ccattggggc ttccttgtga ctttttgtgt
    13441 taagtgtagc gggagtcacg tcagcaatat tctgattctt actgctgatt ttcacgtcag
    13501 cacgtggtaa aaatgaaaca ctgttgtaaa aatgtggtga tcctcatgcc cgaacccgta
    13561 gccgaacccg cgctaaacgg attgcgcctg aatttgcgca ttgtctccat tgtcatgttt
    13621 aacttcgcca gctacctcac catcgggttg ccgctcgctg tattaccggg ctatgtccat
    13681 gatgtgatgg gctttagcgc tttctgggca ggattggtta tcagcctgca atatttcgcc
    13741 accttgctga gccgtcctca tgccggacgt tacgccgatt tgctgggccc caaaaagatt
    13801 gtcgtcttcg gtttatgcgg ctgctttttg agcggtctgg gatatctgac ggcaggatta
    13861 accgccagtc tgcccgtcat cagcctgtta ttactttgcc tgggacgcgt gatccttggg
    13921 attgggcaaa gttttgccgg aacgggatcg accctgtggg gcgttggcgt ggttggctcg
    13981 ctgcatatcg ggcgagtgat ttcgtggaac ggcattgtca cttacggggc gatggcgatg
    14041 ggtgcgccgt taggcgtcgt gttttatcac tggggcggct tgcaggcgtt agcgttaatc
    14101 attatgggcg tggcgctggt ggccattttg ttggcgatcc cgcgtccgac ggtaaaagcc
    14161 agtaaaggca aaccgctgcc gtttcgcgcg gtgcttgggc gcgtctggct gtacggtatg
    14221 gcactggcac tggcttctgc cggatttggc gtcatcgcca cctttatcac gctgttttat
    14281 gacgctaaaa gttgggacgg tgcggctttc gcgctgacgc tgtttagctg tgcgtttgtc
    14341 ggtacgcgtt tgttattccc taacggcatt aaccgtatcg gcggcttaaa cgtagcgatg
    14401 atttgcttta gcgttgagat aatcggcctg ctactggttg gcgtggcgac tatgccgtgg
    14461 atggcgaaaa tcggcgtctt actggcgggg gcagggtttt cgctggtgtt cccggcatta
    14521 ggtgtagtgg cggtaaaagc ggttccgcag caaaatcagg gggcggcgct ggcaacttac
    14581 accgtattta tggatttatc gcttggcgtg accggaccac tggctgggct ggtgatgagc
    14641 tgggcgggcg taccggtgat ttatctggcg gcggcgggac tggtcgcaat cgcgttatta
    14701 ctgacgtggc gattaaaaaa acggcctccg gaacacgtcc ctgaggccgc ctcatcatct
    14761 taaaacttac tgaataacca gcgtattaat gatgttttct gcggtggtct gcgctttttg
    14821 ctgatcgtca gcgggcagcg taatttgcat ggtcagcagt tgattaccca cgttacccag
    14881 aataacggaa gagtacgccg tctggccttt cgcggagata atactgtcta actgctgcat
    14941 tttgtgacct ttcagctcaa tggctttatt ggttaccact tgcagctgcg gatcgcggct
    15001 acgttgctga tcttccagac gcttcgccag caccgccaga tcttctttcg gatcatcgcc
    15061 catgatgacg atgactgctt tctgcccggt ggcgtcggac cagacatgca tgttattggc
    15121 ctgcgttccc agcttaccgc tctggtcggt catatccgct ggcagcgaga aacttaactt
    15181 gccatcaagc aggttgacgg gattcccggt agcgttattt tccgcgaccg aaccctgcgc
    15241 cgtagcgtta gtgtctttat catcacaggc cgcaagcccc ataaccagca ggccaattcc
    15301 gacatattta accagattgc gcattgactt cttcctttcg ataaacggcc ataacggctc
    15361 attcatccat cttatcacaa ctctgataac gaacctttaa ctcgcctgca aagcgttgat
    15421 ttcggattta tctgccagtc ttttcaacag catattgagt aatacgccat acattggcag
    15481 gaagaaaacg atactgatta acactttgaa acagtaatcg accagcgcga tttccatcca
    15541 gtgttcagcc ataaaggcat ccgggctacg ccagaaggca atgaagaaaa aggccagcgt
    15601 gtcgctgacg ttaccgaaca gtgtggacgc tgtcggtgcc agccaccagc ggcgactctg
    15661 acgcaggcgg ttaaaaacgt gcacgtcgag gatctgtccc agcgcgtagg ccatgaaact
    15721 ggcggtggcg atacgggcga caaacaggtt gaagtgggcg agtgcgccga atccctgcca
    15781 ggaacccata tagaatagcg acgagatgac gtaggagatc agcaacgccg ggatcatcac
    15841 cgcaaagatg atacgacggg ccagcggtgc gccaaaaata cgcacggtca ggtcggtagc
    15901 aaggaaaata aacgggaagc taaacgcgcc ccaggtggta tggaaaccca aaatggagac
    15961 gggaagctga accagatagt tactggaggt gatcaccagc agatgaaata acgataacca
    16021 gaacaacgcc ttatagcgtt gagtttgcga gaaaacgttc atattgtacc tttttgatta
    16081 accattgggg tgagggaacc caatacgtac gacacgtctg ttaccttaac ataataacgt
    16141 gcttaccctt ttttcgagcc gccgcatgat actgctttac gttgacaatg caatggttaa
    16201 ttttcacgca atcgttaacc tggtttgctt acggactcac agggcgtaaa ctagcgccgt
    16261 ttttttatgt gatgagaaga aaatgaccga tctcttttcc agccctgacc acacactcga
    16321 cgcacttggc ctgcgctgcc cggaacccgt aatgatggtg cgcaaaactg tgcgcaatat
    16381 gcagcccggc gaaacgttgc tgattatcgc cgacgatccg gccactaccc gcgatattcc
    16441 tgggttttgt acctttatgg aacacgaact ggttgcgaaa gagacggatg gactgcctta
    16501 tcgttatttg attcgtaaag gcggttgatg ggggctgatt ggcttcgatg ccgccttttc
    16561 ccctcaccct aaccctctcc ccagaggggc gaggggaccg atcgcgctca atgttgcgat
    16621 cggtttgcct tatctcctgc gcaacaatct taacgcattc gctgtcacca gcaccgtcgc
    16681 acccgtatct gccagcaccg ccagccatag tccggtcatc cctaaaagcg tggtgacgag
    16741 gaagatccct ttcagtccca gcgcaatggt gatgttctgg cggatattgg cgtgagtggc
    16801 gcgtgccagt tcaatcattt gcaccaggcc gcgcaggtgg ttatgggtta atgctgcatc
    16861 agcggtttcc agcgccacgt ctgtgccact gcccattgca atcccaatgg cggcagcttt
    16921 catcgctggc gcgtcgttaa taccgtcacc gaccatcgcc agcggcgcat gttgattcag
    16981 ctcggtcacc gctttgactt tatattccgg caacaggccc gctttaaact ccagccccag
    17041 ctccccggca attgccgccg ctgcgcgtgg attatcgccg gtgaggatca cccctttgac
    17101 gcccagcgcg ttcagttcac tgatggcagt tgcagcatcg gcgcgcaggg tatcctgcaa
    17161 tgcaatgata cccagcacgt catcattacg tactaccagc acaaccgttt gcccggcgct
    17221 ttccagttca ttaatcaaac cagcaaatgc atcagcggga tgtttcccgg cagcgcatat
    17281 caacacgcgc tcaccgttaa cctgcgcttc aatgccagac ccgaccagcg cccgctgtga
    17341 ttcggcggcg ggaatggcga gtgcagcaac ctgtgcttcg cgcacgatgg cctgcgccag
    17401 tggatgcgtc gcgctttgct cgaccgccgc cgccagtgtc agcagttcag attcactaat
    17461 acccgttgcc ggatgaatcg cggtaacgcg cggtttaccg acggtcagcg taccggtttt
    17521 atcaaacgcc acctgagtaa cacgacctag ttgttccagc gccgctccgc ctttaatcaa
    17581 cgccccacga cgcgctgctg ccgccagccc ggaggtaatc gccgcgggcg tggagataac
    17641 taacgcacac gggcagccaa tcagcagcag cgtcaggcct ttataaatcc actcctgcca
    17701 gctggcggca aacagcagcg gtggcaccag cgtcaccagc agggcgacgg ccataatcgc
    17761 tggcgtataa atacggctga aacggtcgat aaaccgctca atgggggcgc ggcgctcttc
    17821 ggcttcttcg atcagtttca gaatccggtc aatggcgctg gcacccggtt ctgacagcac
    17881 ttccagcgtt accagacggt ctacgctggt ggctcctgca ggaactttat cgcccgtcgc
    17941 gcgctccacc ggaatggatt ctccggtcag ggcgctttca tcaaaactgg caaacggtga
    18001 gagcagttta ccgtcggcag gcaaacgccc acctgcggcg acttcaatca catcgccagg
    18061 ccgcaggctg ttaatcgcca cctcttcccg ctcaccgtta cgcaggcgcg tggcggtttc
    18121 tggtttcagc gccattaacg cgctaacgcc ctgacgcgcg cggctggcgg cccagccttc
    18181 cagtcgttca ccaatcaaaa acagcagcaa caccatcgca gcttcagccg ttgcgccaat
    18241 aaacagtgca ccaatagcgg ctacgctcat taaggtttca atggcgaagt agctgccgga
    18301 tttgatcagc cgtaatgcct gatgagcaat cgggtacagc ccaaccagcg tggtcgcgat
    18361 aaacgccagt tgcccgaacg gatgattgaa ctgctccaga ccccagctga ttgccatcat
    18421 cacgattagt gtaatcagcg gcagattctc tttcaggcgc gatgcttgtg gctcgtcggc
    18481 ggcctgctca tcgcgcaggg aatagcccgc tttttgcacc gcagattcaa cttgtgcacg
    18541 aatgtcattg tcggcatcaa ccaccagttt ttcggtggcg aacaacacct gcacctgatt
    18601 cacacctgca agctggcgca cggcattttc taccttgcgc gcacaggcgg cgcagtccat
    18661 gccactgact ttccagctat agcgggtgcc ggagacgttt tcagagagcg ttggcgagct
    18721 ggagcatgcg ccgtcgcagc aacagtcgtt ggcgttctgt accgtggtta gcggtttgaa
    18781 cgcagcaaat tgaggggctt tcttgccgtg attgtcaggt gtcgacatgg catactccgg
    18841 ttaagttttt tctcattaac cgaaggatac actctggagt cgactccaga gtcaagtttt
    18901 atcagaaata cagtgagcgg acgatgagga agtgaccggc aaagtagcag gccgcagcaa
    18961 tcgcgttatc cgcacggaag cgtcggcgat agtggctccc cagccagaca aagttactga
    19021 taaacagcaa cgaagcgcca acaaacgcag agagcgccgg agcggtcgga cggaagaacc
    19081 acagttcacc tgccagccac accatcacca gcgtcatgcc gataaacgtg cagataggcc
    19141 aacgatactc ttccagccgc gtccagataa tcgccagtaa cagcgcaccc agaaccagca
    19201 acaccagtgg cagaggccag aagaaagaga gcgtcatctg actggcgaaa tagatggtgt
    19261 acagcaggtg cgagaggaaa aacgcgccga tggcgtacat cagacgttga cgtggcaaca
    19321 gggttagcgc atcgcccagc agtgaggcgc acagccctgc cagcaccaga tagctaatgg
    19381 cgtcgaacat cggcgcttgc caggccagta acagcaggag aagaagggtt aacggtttaa
    19441 acacccagcg ttgccaggtt ggcccacgat acgatgcatc cacagatagc catgcggaaa
    19501 gacagacagc gataaacgac caaagcatct tagttccttg aattcgttat tttttcgtaa
    19561 gcggaatgcc tacggtcttg cttccagttt agtggcgagg gtggacggat gacaacacca
    19621 taactagcag ggtatgctta tttccgcatt ttccgatgag ggataaagat gagcaaacca
    19681 cctcttttct ttattgttat cattggctta attgtcgtcg ccgcatcgtt tcgttttatg
    19741 caacagcgac gggaaaaagc tgataatgat atggctccgc tccagcaaaa gctggtggtg
    19801 gtgagcaaca agcgggaaaa accgattaac gatcgccgtt cgcgccagca ggaagtgact
    19861 ccggcaggca ccagtatgcg ctatgaggca agcttcaaac cgcaaagcgg aggaatggag
    19921 cagacgtttc gcctcgacgc ccagcagtac catgccctga cagtgggcga taaaggtacg
    19981 ctgagctata aaggaacgcg ctttgttagc tttgttggcg aacaataagg ttatttttta
    20041 actttaaatt tcttctgcca gaccagcagt tcaaacacgc cgaaaaggaa aatccgcacc
    20101 ttttcggcgg tggtcatctg cgggccatct ttcggtaaag tggatttcaa tagcgccagc
    20161 tgcataccat gcatcagcac ggtaaaaatc agcgccacgt taacgaaaat attcagcggg
    20221 cgcgggaagg gatgcaccag attgaggatt aaaaatcccc aaacgcagag cattaacaaa
    20281 cgaccaatat taatcagcat cactttctcc ttgtgcttcg cgttgataca gccgataagc
    20341 cacctgaccc gccacttttt cccgatgtaa tgaccagttt gccggaacag tgggcagacc
    20401 gttttcgact tcgctttcga cataaatcag ggcttcgtca gccagccagc cgttatcttc
    20461 cagtaaattt atcgtctctt ctaacaagcc acggcggaac ggtggatcga caaacacgat
    20521 attatgcggt gtaccttttt gcgccaggaa tgacatcgcg ttgctgttca ccacgcgtgc
    20581 attgcctgct tttagtgtcg ccagattctt aattaactgc tgagaaaccg cgcgatccat
    20641 ctcaatcaac gtggcccccg cagcgtagcg cgataacgct tccagtccca gcgcgccgct
    20701 cccggcgaag caatccagac attgggcgtc aacaatgacc ggagccagcc agttaaacaa
    20761 tgtttcgcgt acgcggtcgg tggtggggcg cagacctagg ctatcaggaa ccgggagttt
    20821 acggcctcgc cactgcccgc caataatgcg gatttggccg ctgccggaat gattcggttt
    20881 tttcatgata aattgctcaa tccgccagat aacacatact tgcaggcggt gatgtgaatt
    20941 aagttaagtg atagactatt tcatcatttt tttagctgct atgtacatag cgttaacgct
    21001 gtgccatgaa gcaacagcga ggagtgtagt cgcaaatggc gaaagaaaaa aaacgtggct
    21061 ttttttcctg gctgggcttt ggtcaaaaag agcagacccc ggaaaaagag acagaagttc
    21121 agaatgaaca accggttgta gaagaaatcg ttcaggcgca agagcctgcg aaggcttctg
    21181 aacaagccgt cgaagagcaa ccgcaggcgc atactgaagc cgaggcggaa acttttgctg
    21241 ccgacgttgt ggaagtcact gaacaggttg ctgaaagtga aaaagcgcag cctgaagcgg
    21301 aagtcgttgc acagccggaa ccggtcgtag aagaaacgcc ggagccagtg gctatcgaac
    21361 gtgaagagct gccgttgccg gaagacgtca acgccgaaga ggtttcgcca gaagagtggc
    21421 aggctgaagc ggaaaccgta gagattgtcg aagcggcgga agaagaagcg gctaaagaag
    21481 aaatcaccga cgaagagctg gaagcacagg cgctggctgc cgaagcggca gaagaggcgg
    21541 tgatggtggt tcctccggta gaagagcagc cggtggaaga aatcgctcag gagcaggaaa
    21601 aaccgaccaa agaaggtttc ttcgcgcgcc tgaaacgcag cctgttaaaa accaaagaaa
    21661 atctcggttc cggatttatc agcctgttcc gcggtaaaaa aatcgacgat gatctgtttg
    21721 aggagctgga agaacagctg ttgatcgccg atgtgggcgt ggaaaccaca cgtaaaatta
    21781 tcaccaatct gacggaaggc gcatcccgca agcagcttcg tgatgccgag gcgctctatg
    21841 gcctgctgaa agaagagatg ggcgagattc tggcgaaagt cgatgagccg ctgaatgttg
    21901 aaggtaaaac gccgttcgtg atcctgatgg tgggcgtcaa cggtgtgggt aaaactacga
    21961 cgattggtaa gctggcacgt cagtttgagc tgcagggtaa atcggtgatg ctggcggcgg
    22021 gcgatacttt ccgtgcagca gcggttgaac agcttcaggt ctggggtcag cgcaacaata
    22081 ttccggtgat tgcccagcat accggtgcgg attccgcctc tgttatcttc gacgccattc
    22141 aggcagctaa agcgcgtaat atcgacgtcc tgattgccga taccgccgga cgcctgcaga
    22201 acaaatcgca cctgatggaa gagttgaaga aaatcgtccg cgtgatgaag aaactcgacg
    22261 ttgaagcgcc gcatgaagtt atgctgacta ttgatgccag taccgggcag aatgcggtaa
    22321 gccaggccaa actgttccac gaagccgttg gcttaaccgg catcacgcta acgaaactgg
    22381 acggcacggc gaaaggcggg gtaattttct cggtggctga ccagtttggt atccctatcc
    22441 gctacattgg tgtcggcgaa cgtattgagg atttgcgtcc gtttaaggcg gacgacttta
    22501 tagaggcact ttttgcccga gaggattaac aatgattcgc tttgaacatg tcagcaaggc
    22561 ttatctcggt gggagacagg cgctgcaggg cgttacgttc catatgcagc cgggtgagat
    22621 ggcgtttctg accggtcatt ccggcgcagg gaaaagtacc ctcctgaagc tgatctgtgg
    22681 gattgagcgg cccagcgccg ggaaaatctg gtttagcggc catgacatca cgcgtctgaa
    22741 aaaccgtgaa gttccgtttc tgcgccgcca gattggcatg attttccagg atcaccatct
    22801 actgatggac cgtactgtct acgataacgt ggcgatcccg ctgattatcg ctggtgccag
    22861 cggtgacgat attcgtcgcc gggtgtcggc ggcactggat aaagtcgggc tactggacaa
    22921 agcgaagaac ttccctattc agctttccgg cggtgaacaa cagcgtgttg gcattgcccg
    22981 cgcggtggtg aataagcccg cggtactgct ggcggacgaa ccgaccggta acctggacga
    23041 cgcgttgtcg gaagggattc tacgtctgtt tgaagagttt aaccgcgttg gggtaaccgt
    23101 attgatggca acgcacgaca tcaacctgat ttcacggcgt tcctatcgca tgctcaccct
    23161 gagcgatggt cacttgcatg gaggcgtggg ccatgaataa gcgcgatgca atcaatcata
    23221 ttcggcagtt tggtgggcgt ctggatcgct tccgtaaatc ggtcggcggc tcaggcgacg
    23281 gcggtcgtaa cgcaccgaaa cgcgcgaaat cctcgccaaa accggtaaat cgcaaaacca
    23341 acgttttcaa cgaacaggtg cgctatgcct tccacggcgc attgcaggat ctgaaaagca
    23401 aaccgttcgc cacgttttta acggtgatgg ttatcgccat ctccctgacg ctgcccagcg
    23461 tctgttatat ggtgtacaaa aacgttaatc aggcggcgac gcagtattat ccgtcaccgc
    23521 aaatcactgt ttacttgcaa aaaacgctgg acgatgacgc cgctgcgggc gtggtggcac
    23581 agttgcaggc cgagcaaggc gtggagaaag tgaactatct ttctcgtgaa gacgcactgg
    23641 gcgagttccg taactggtct ggttttggtg gtgcgctgga tatgctggaa gaaaacccgc
    23701 ttccggcagt ggcggtggtg atcccgaaac tcgattttca ggggacggaa tcactcaata
    23761 cgctgcgtga tcgtatcacg cagattaacg gcattgacga agtgcggatg gatgacagct
    23821 ggtttgcccg tctggcggcg ttgaccgggc tggtcgggcg cgtttcggcg atgatcggcg
    23881 tgttgatggt ggcggcagtg ttcctcgtca tcggcaacag cgtacgtctg agcatctttg
    23941 ctcgccgtga ctccatcaac gtgcagaaac tgattggtgc gacggatggt ttcatccttc
    24001 gcccgttcct gtatggtggc gcactgctgg gattttctgg cgcattgttg tcattaattt
    24061 tgtcagaaat tctggtgctg cgattgtcat cggcggttgc ggaagtggca caggttttcg
    24121 gaacgaattt tgatatcaat ggtttatcgt tcgatgaatg cctgctattg ctgctggtat
    24181 gctcgatgat tggctgggtg gcagcgtggc ttgccacggt acaacattta cgccacttta
    24241 cgcctgaata ataaaagcgt gttatactct ttccctgcaa tgggttccgt agcagggaaa
    24301 gagatcccgt tgtctcttcc cggtatttca tctctatgtc acattttgtg cgtaatttat
    24361 tcacaagctt gcattgaact tgtggataaa atcacggtct gataaaacag tgaatgataa
    24421 cctcgttgct cttaagctct ggcacagttg ttgctaccat tgaagcgcca gaagatatcg
    24481 attgagagga tttgaatgac tgacaaaatg caaagtttag ctttagcccc agttggcaac
    24541 ctggattcct acatccgggc agctaacgcg tggccgatgt tgtcggctga cgaggagcgg
    24601 gcgctggctg aaaagctgca ttaccatggc gatctggaag cagctaaaac gctgatcctg
    24661 tctcacctgc ggtttgttgt tcatattgct cgtaattatg cgggctatgg cctgccacag
    24721 gcggatttga ttcaggaagg taacatcggc ctgatgaaag cagtgcgccg tttcaacccg
    24781 gaagtgggtg tgcgcctggt ctccttcgcc gttcactgga tcaaagcaga gatccacgaa
    24841 tacgttctgc gtaactggcg tatcgtcaaa gttgcgacca ccaaagcgca gcgcaaactg
    24901 ttcttcaacc tgcgtaaaac taagcagcgt ctaggctggt ttaaccagga tgaagtcgaa
    24961 atggtggccc gtgaactggg cgtaaccagc aaagacgttc gtgagatgga atcacgtatg
    25021 gcggcacagg acatgacctt tgatctgtct tccgacgacg attccgacag ccagccgatg
    25081 gcaccggtgc tctatctgca ggataaatca tctaactttg ccgacggcat cgaagatgat
    25141 aactgggaag agcaggcggc aaaccgtctg accgacgcga tgcaaggtct ggacgaacgc
    25201 agccaggaca tcatccgcgc gcgctggctg gacgaagaca acaagtccac gttgcaggaa
    25261 ctggctgacc gttacggtgt ttccgctgaa cgtgtacgcc agctggaaaa gaacgcgatg
    25321 aaaaaactgc gcgctgctat agaagcgtaa tttccgctat taagcagaga accctggatg
    25381 agagtccggg gtttttgttt tttgggcctc tacaataatc aattccccct ccggcaaaac
    25441 gtcaatcccc acgcagattg ttaataaact gtcaaaatag ctattccaat atcataaaaa
    25501 tggggtatgt tttagcagag tatgctgcta aagcacgggt agtcatgcat aaaacgaaat
    25561 aaagtgctaa atcacaacac cacaacacac gtaataacca gaagaatggg gattctcagg
    25621 atgaatataa agggtaaagc gttactggca ggatgtatcg cgctggcatt cagcaatatg
    25681 gctctggcag aagatattaa agtcgcggtc gtgggcgcaa tgtccggtcc ggttgcgcag
    25741 tacggtgacc aggagtttac cggcgcagag caggcggttg cggatatcaa cgctaaaggc
    25801 ggcattaaag gcaacaaact gcaaatcgta aaatatgacg atgcctgtga cccgaaacag
    25861 gcggttgcgg tggcgaacaa agtcgttaac gacggcatta aatatgtgat tggtcacctc
    25921 tgttcttcat caacgcagcc tgcgtctgat atctacgaag acgaaggcat tttaatgatc
    25981 accccagcgg caaccgcgcc ggagctgacc gcccgtggct atcagctgat cctgcgcacc
    26041 accggcctgg actccgacca ggggccgacg gcggcgaaat atattcttga gaaagtgaaa
    26101 ccgcagcgta ttgctatcgt tcacgacaaa cagcaatacg gcgaaggtct ggcgcgagcg
    26161 gtgcaggacg gcctgaagaa aggcaatgct aacgtggtgt tctttgatgg tatcaccgcc
    26221 ggggaaaaag atttctcaac gctggtggcg cgtctgaaaa aagagaatat cgacttcgtt
    26281 tactacggcg gttatcaccc ggaaatgggg caaatcctgc gtcaggcacg cgcggcaggg
    26341 ctgaaaactc agtttatggg gccggaaggt gtggctaacg tttcgctgtc taacattgcg
    26401 ggcgaatcag cggaagggct gctggtgacc aagccgaaga actacgatca ggttccggcg
    26461 aacaaaccca ttgttgacgc catcaaagcg aaaaaacagg acccaagcgg cgcattcgtt
    26521 tggaccacct acgccgcgct gcaatctttg caggcgggcc tgaatcagtc tgacgatccg
    26581 gctgagatcg ccaaatacct gaaagcgaac tccgtggata ccgtgatggg tccgctgacg
    26641 tgggatgaga aaggtgatct gaaaggcttt gagttcggcg tatttgactg gcacgccaac
    26701 ggcacggcga ccgatgcgaa gtaatcatta atcggcaact ttgggttgcc gccaaattgc
    26761 taatatcgag tacgttgctt catgccggat gcggcgtaaa cgccttatcc ggcctacaag
    26821 atccaaagaa atcagtaaat tgcaacacac attgtaggcc tgataagcgt agcgcatcag
    26881 gcaatttctc gttggtcatc acttttgaaa tcaacttgac gattaacgct tctcccagcc
    26941 gccctgttgc gccgtaaatc ccagtgcctg cataaacgcc gtcatcacac cgcgatcttc
    27001 cacgcctgca tccgccatcc accagcatga aacgccagga ttgttacgca aaacctcttc
    27061 cagcagatat tgccccacac cgcgacgtcg ggtgacttcc cgcacacgca gggaatccag
    27121 tgctccctcg gtgccgctta aggttacccg tacggcagcg agcaggcgct cgttaaaacg
    27181 cgcggcgtag atacggtggt tatcgtcaac ctgtaaagag gaaggggaat actccggcca
    27241 gatcttttgc aggtcaatcc ggtcctggtc gctaaagttt tctaatcgaa tgatggtcag
    27301 cttcatgggt aacccgtgta aatcacaaaa gtggaaccag tgtagcgaaa taatttaatc
    27361 ggaggctttc tcttttttat ttcttttggc aggtgattaa ttttttaaca gcaataatta
    27421 caaagttaaa acattagaga atgaaaaata cccagcataa tcccctgaat ggtagtgaat
    27481 tattccgccc tttgtgccgt tattttatgc tga
//
LOCUS       DADMJE010000040        27461 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.041, whole genome shotgun sequence.
ACCESSION   DADMJE010000040 DADMJE010000000
VERSION     DADMJE010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27461)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27461)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27461
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.041"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            454..3639
                     /gene="rne"
                     /locus_tag="JN001_001547"
     CDS             454..3639
                     /gene="rne"
                     /locus_tag="JN001_001547"
                     /EC_number="3.1.26.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E"
                     /protein_id="HAY9052816.1"
                     /translation="MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKG
                     KITRIEPSLEAAFVDYGAERHGFLPLKEIAREYFPANYSAHGRPNIKDVLREGQEVIV
                     QIDKEERGNKGAALTTFISLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLEL
                     PEGMGLIVRTAGVGKSAEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVRAF
                     RDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIE
                     SAFQREVRLPSGGSIVIDSTEALTAIDINSARATRGGDIEETAFNTNLEAADEIARQL
                     RLRDLGGLIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISRFGLLEMSRQRL
                     SPSLGESSHHVCPRCSGTGTVRDNESLSLSILRLIEEEALKENTQEVHAIVPVPIASY
                     LLNEKRSAVNAIETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYMLPKLHEE
                     AMALPSEEEFAERKRPEQPALATFAMPDVPPAPTPAEPAAPVVAPAPKAAPATPAAPA
                     QPGLLSRFFGALKALFSGSEETKPTEQPAPKAEAKPERQQDRRKPRQNNRRDRNERRD
                     TRSERTEGSDNREENRRNRRQAQQQTAETRESRQQAEVTEKARTTDEQQAPRRERSRR
                     RNDDKRQAQQEAKALNVEEQSVQETEQEERVRPVQPRRKQRQLNQKVRYEQSVAEEAV
                     VAPVVEETAAAEPIVQEAPAPRTELVKVPLPVVAQTAPEQQEENNADNRDNGGMPRRS
                     RRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACASPELASGKVWIRYPIVRPQDVQV
                     EEQREQEEVQVQPMVTEVPVAAAVEPVVSAPVVEEMAEVVEAPVPVAEPQPEVVETTH
                     PEVIAAAVTEQPQVITESDVAVAQEVAEHAEPVVEPQEETADIEEVAETAEVVVAEPE
                     VVAQPAAPVVAEVAAEVETVAAVEPEITVEHNHATAPMTRAPAPEYVPEAPHHSDWQR
                     PTFAFEGKGAAGGHTATHHASAAPARPQPVE"
     gene            complement(3836..4789)
                     /gene="flgL"
                     /locus_tag="JN001_001548"
     CDS             complement(3836..4789)
                     /gene="flgL"
                     /locus_tag="JN001_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-filament junction protein FlgL"
                     /protein_id="HAY9052817.1"
                     /translation="MRFSTQMMYQQNMRGITNSQAEWMKYGEQMSTGKRVVNPSDDPI
                     AASQAVVLSQAQAQNSQYTLARTFAIQKVSLEESVLSQVTTAIQNAQEKIVYASNGTL
                     SDDDRASLATDIQGLRDQLLNLANTTDGNGRYIFAGYKTETAPFSEEKGKYVGGAESI
                     KQQVDASRSMVIGHAGDKIFDSITSNAVAEPDGSASETNLFAMLDSAIAALKTPVADS
                     EADKEIAAAALDKTNRGLKNSLNNVLAVRAELGTQLNELESLDSLGSDRALGQTQQMS
                     DLVDVDWNATISSYIMQQTALQASYKAFTDMQGLSLFQLNK"
     gene            complement(4801..6444)
                     /gene="flgK"
                     /locus_tag="JN001_001549"
     CDS             complement(4801..6444)
                     /gene="flgK"
                     /locus_tag="JN001_001549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HAY9052818.1"
                     /translation="MSSLINNAMSGLNAAQAALNTASNNISSYNVAGYTRQTTIMAQA
                     NSTLGAGGWVGNGVYVSGVQREYDAFITNQLRAAQTQSSGLTARYEQMSKIDNMLSTS
                     TSSLATQMQDFFTSLQTLVSNAEDPAARQALIGKSEGLVNQFKTTDQYLRDQDKQVNI
                     AIGASVDQINNYAKQIASLNDQISRLTGVGAGASPNNLLDQRDQLVSELNQIVGVEVS
                     VQDGGTYNITMANGYSLVQGSTARQLAAVPSSADPSRTTVAYVDGTAGNIEIPEKLLN
                     TGSLGGILTFRSQDLDQTRNTLGQLALAFAEAFNTQHKAGFDANGDAGEDFFAIGKPA
                     VLQNTKNKGDVAIGATVTDASAVLATDYKISFDNNQWQVTRLASNTTFTVTPDANGKV
                     AFDGLELTFTGTPAVNDSFTLKPVSDAIVNMDVLITDEAKIAMASEKDAGDSDNRNGQ
                     ALLDLQSNSKTVGGAKSFNDAYASLVSDIGNKTATLKTSSATQGNVVTQLSNQQQSIS
                     GVNLDEEYGNLQRFQQYYLANAQVLQTANAIFDALINIR"
     gene            complement(6510..7450)
                     /gene="flgJ"
                     /locus_tag="JN001_001550"
                     /pseudo
     CDS             complement(6510..7450)
                     /gene="flgJ"
                     /locus_tag="JN001_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415599.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly peptidoglycan hydrolase FlgJ"
     gene            complement(7450..8547)
                     /locus_tag="JN001_001551"
     CDS             complement(7450..8547)
                     /locus_tag="JN001_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415598.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring protein FlgI"
                     /protein_id="HAY9052819.1"
                     /translation="MIKFLSALILLLVTTAAQAERIRDLTSVQGVRQNSLIGYGLVVG
                     LDGTGDQTTQTPFTTQTLNNMLSQLGITVPTGTNMQLKNVAAVMVTASLPPFGRQGQT
                     IDVVVSSMGNAKSLRGGTLLMTPLKGVDSQVYALAQGNILVGGAGASAGGSSVQVNQL
                     NGGRITNGAVIERELPSQFGVGNTLNLQLNDEDFSMAQQIADTINRVRGYGSATALDA
                     RTIQVRVPSGNSSQVRFLADIQNMQVNVTPQDAKVVINSRTGSVVMNREVTLDSCAVA
                     QGNLSVTVNRQANVSQPDTPFGGGQTVVTPQTQIDLRQSGGSLQSVRSSARLNNVVRA
                     LNALGATPMDLMSILQSMQSAGCLRAKLEII"
     gene            complement(8559..9257)
                     /gene="flgH"
                     /locus_tag="JN001_001552"
     CDS             complement(8559..9257)
                     /gene="flgH"
                     /locus_tag="JN001_001552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body L-ring protein FlgH"
                     /protein_id="HAY9052820.1"
                     /translation="MQKNAAHTYAISSLLVLSLTGCAWIPSTPLVQGATSAQPVPGPT
                     PVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSSSANASRDGKT
                     NFGFDTVPRYLQGLFGNARADVEASGGNTFNGKGGANASNTFSGTLTVTVDQVLVNGN
                     LHVVGEKQIAINQGTEFIRFSGVVNPRTISGSNTVPSTQVVDARIEYVGNGYINEAQN
                     MGWLQRFFLNLSPM"
     gene            complement(9310..10092)
                     /gene="flgG"
                     /locus_tag="JN001_001553"
     CDS             complement(9310..10092)
                     /gene="flgG"
                     /locus_tag="JN001_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HAY9052821.1"
                     /translation="MISSLWIAKTGLDAQQTNMDVIANNLANVSTNGFKRQRAVFEDL
                     LYQTIRQPGAQSSEQTTLPSGLQIGTGVRPVATERLHSQGNLSQTNNSKDVAIKGQGF
                     FQVMLPDGSSAYTRDGSFQVDQNGQLVTAGGFQVQPAITIPANALSITIGRDGVVSVT
                     QQGQAAPVQVGQLNLTTFMNDTGLESIGENLYTETQSSGAPNESTPGLNGAGLLYQGY
                     VETSNVNVAEELVNMIQVQRAYEINSKAVSTTDQMQQKLTQL"
     gene            complement(10230..10985)
                     /locus_tag="JN001_001554"
     CDS             complement(10230..10985)
                     /locus_tag="JN001_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgF"
                     /protein_id="HAY9052822.1"
                     /translation="MDHAIYTAMGAASQTLNQQAVTASNLANASTPGFRAQLNALRAV
                     PVEGLSLPTRTLVTASTPGADMTPGKIDYTSRPLDVALQQDGWLAVQTADGSEGYTRN
                     GSIQVDPTGQLTIQGHQVIGEAGPIAVPEGAEITIAADGTISALNPGDPANTVAPVGR
                     LKLVKATGSEVQRGDDGIFRLSAETQATRGPVLQADPTLRVMSGVLEGSNVNAVAAMS
                     DMIASARRFEMQMKVISSVDDNAGRANQLLSMS"
     gene            complement(11005..12933)
                     /gene="flgD"
                     /locus_tag="JN001_001555"
                     /pseudo
     CDS             complement(11005..12933)
                     /gene="flgD"
                     /locus_tag="JN001_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706995.3"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
     gene            complement(12945..13349)
                     /gene="flgC"
                     /locus_tag="JN001_001556"
     CDS             complement(12945..13349)
                     /gene="flgC"
                     /locus_tag="JN001_001556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HAY9052823.1"
                     /translation="MALLNIFDIAGSALTAQSQRLNVAASNLANADSVTGPDGQPYRA
                     KQVVFQVNAAPGAATGGVKVADVIESQAPDKLVYEPGNPLADAKGYVKMPNVDVVGEM
                     VNTMSASRSYQANVEVLNTVKSMMLKTLTLGQ"
     gene            complement(13353..13682)
                     /gene="flgB"
                     /locus_tag="JN001_001557"
     CDS             complement(13353..13682)
                     /gene="flgB"
                     /locus_tag="JN001_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HAY9052824.1"
                     /translation="MLDKLDAALRFQQEALNLRAQRQEVLAANIANADTLGYQARDID
                     FASELKKVMQRGRDATSVVALTMTSTQHIPAQALTPPTAELQYQMSLSALSGQIKGMM
                     NVLQSGN"
     gene            13838..14497
                     /gene="flgA"
                     /locus_tag="JN001_001558"
     CDS             13838..14497
                     /gene="flgA"
                     /locus_tag="JN001_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body P-ring formation protein
                     FlgA"
                     /protein_id="HAY9052825.1"
                     /translation="MLAIKRSVAIIAILFSPLSAASNLTSQLHTFFSAQLVGVSDEVR
                     VSIRTAPNLLPPCEQPLLSMSNNSRLWGNVNVLARCGNDKRYLQVNVQATGNYVVAAM
                     PIVRGGKLEAGNVKLKRGRLDTLPPRTVLDINQLVDAISLRDLSPDQPIQLTHFRQAW
                     RVKAGQRVNVIASGDGFSANAEGQALNNAAVAQNARMRMVSGLVVSGVVDADGNILIN
                     L"
     gene            14573..14902
                     /gene="flgM"
                     /locus_tag="JN001_001559"
     CDS             14573..14902
                     /gene="flgM"
                     /locus_tag="JN001_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma-28 factor FlgM"
                     /protein_id="HAY9052826.1"
                     /translation="MSIDRTSPLNPVSTVQPRETTDAPVTNTRAAKTTDSTSTSTSTS
                     TSTSTSTSVTLSDAQAKLMQPGSSDINLERVEALKLAIRNGELKMDIGKIADALINEA
                     QQDLQSN"
     gene            14907..15323
                     /gene="flgN"
                     /locus_tag="JN001_001560"
     CDS             14907..15323
                     /gene="flgN"
                     /locus_tag="JN001_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FlgN"
                     /protein_id="HAY9052827.1"
                     /translation="MTRLAEILDQMSAVLNDLKTVMDQEQQHLSMGQINGSQLQWITE
                     QKSSLLATLDYLEQLRKKEPNTANSVDISQRWQEITVKTQQLRQMNQHNGWLLEGQIE
                     RNQQALEMLKPHQEPTLYGANGQTSTTHRGGKKISI"
     gene            complement(15363..16898)
                     /gene="murJ"
                     /locus_tag="JN001_001561"
     CDS             complement(15363..16898)
                     /gene="murJ"
                     /locus_tag="JN001_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706990.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HAY9052828.1"
                     /translation="MNLLKSLAAVSSMTMFSRVLGFARDAIVARIFGAGMATDAFFVA
                     FKLPNLLRRIFAEGAFSQAFVPILAEYKSKQGEDATRVFVSYVSGLLTLALAVVTVAG
                     MLAAPWVIMVTAPGFADTADKFALTSQLLKITFPYILLISLASLVGAILNTWNRFSIP
                     AFAPTLLNISMIGFALFAAPYFNPPVLALAWAVTVGGILQLVYQLPHLKKIGMLVLPR
                     INFHDAGAMRVVKQMGPAILGVSVSQISLIINTIFASFLASGSVSWMYYADRLMEFPS
                     GVLGVALGTILLPSLSKSFASGNHDEYNRLMDWGLRLCFLLALPSAVALGILSGPLTV
                     SLFQYGKFTAFDALMTQRALIAYSVGLIGLIVVKVLAPGFYSRQDIKTPVKIAIVTLI
                     LTQLMNLAFIGPLKHAGLSLSIGLAACLNASLLYWQLRKQKIFTPQPGWMAFLLRLVV
                     AVLVMSGVLLGMLHIMPEWSLGTMPWRLLRLMAVVLAGIAAYFAALAVLGFKVKEFAR
                     RTV"
     gene            complement(17065..17931)
                     /locus_tag="JN001_001562"
     CDS             complement(17065..17931)
                     /locus_tag="JN001_001562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY9052829.1"
                     /translation="MKKLRIGVVGLGGIAQKAWLPVLAAASDWMLQGAWSPTRAKALP
                     ICESWRIPYADSLSSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRD
                     AERLVELAARKKLTLMVGFNRRFAPLYGELKTQLATAASLRMDKHRSNSVGPHDLYFT
                     LLDDYLHVVDTALWLSGGKASLDGGTLLTNDAGEMLFAEHHFSAGPLQITTCMHRRAG
                     SQRETVQAVTDGALIDITDMREWREERGQGVVHKPIPGWQSTLEQRGFVGCARHFIEC
                     VQNQTVPQTAGE"
     gene            complement(17933..18580)
                     /locus_tag="JN001_001563"
     CDS             complement(17933..18580)
                     /locus_tag="JN001_001563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF480 domain-containing protein"
                     /protein_id="HAY9052830.1"
                     /translation="MKYQLTALEARVIGCLLEKQVTTPEQYPLSVNGVVTACNQKTNR
                     EPVMNLSESEVQEQLDNLVKRHYLRTVSGFGNRVTKYEQRFCNSEFGDLKLSAAEVAL
                     ITTLLLRGAQTPGELRSRAARMYEFSDMAELESTLEQLANREDGPFVVRLAREPGKRE
                     SRYMHLFSGEVEDQPAVTDMSNAVDGDLQARVEALEIEVAELKQRLDSLLAHLGD"
     gene            complement(18591..19175)
                     /gene="rimJ"
                     /locus_tag="JN001_001564"
     CDS             complement(18591..19175)
                     /gene="rimJ"
                     /locus_tag="JN001_001564"
                     /EC_number="2.3.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S5-alanine
                     N-acetyltransferase"
                     /protein_id="HAY9052831.1"
                     /translation="MFGYRSNVPKVRLTTDRLVVRLVHDRDAWRLADYYAENRHFLKP
                     WEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFGLFDPDEKEIIGVANFSNVVRGSF
                     HACYLGYSIGQKWQGKGLMFEALTAAIRYMQRTQHIHRIMANYMPHNKRSGDLLARLG
                     FEKEGYAKDYLLIDGQWRDHVLTALTTPDWTPGR"
     gene            19411..20613
                     /gene="mdtH"
                     /locus_tag="JN001_001565"
     CDS             19411..20613
                     /gene="mdtH"
                     /locus_tag="JN001_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtH"
                     /protein_id="HAY9052832.1"
                     /translation="MSRVSQARNLGKYFLLIDNMLVVLGFFVVFPLISIRFVDQMGWA
                     AVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMGIAHEPWLL
                     WFSCLLSGLGGTLFDPPRSALVVKLIRPQQRGRFFSLLMMQDSAGAVIGALLGSWLLQ
                     YDFRLVCATGAVLFVLCAAFNAWLLPAWKLSTVRTPVREGMTRVMRDKRFVTYVLTLA
                     GYYMLAVQVMLPIMVNDVAGAPSAVKWMYAIEACLSLTLLYPIARWSEKHFRLEHRLM
                     AGLLIMSLSMMPVGMVSGLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMG
                     FSRLGLAIGGAIGYIGGGWLFDLGKSAHQPELPWMMLGIIGIFTFLALGWQFSQKRAA
                     RRLLERDA"
     gene            20677..21324
                     /gene="grxB"
                     /locus_tag="JN001_001566"
     CDS             20677..21324
                     /gene="grxB"
                     /locus_tag="JN001_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 2"
                     /protein_id="HAY9052833.1"
                     /translation="MKLYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVG
                     QKQVPILQKDDSRYMPESMDIVHYVDKLDGKPLLTGKRSPAIEEWLRKVNGYANKLLL
                     PRFAKSAFDEFSTPAARKYFVDKKEASAGNFADLLAHSDGLIKNISDDLRALDKLIVK
                     PNAVNGELSEDDIQLFPLLRNLTLVAGINWPSRVADYRDNMAKQTQINLLSSMAI"
     gene            21458..22018
                     /locus_tag="JN001_001567"
     CDS             21458..22018
                     /locus_tag="JN001_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9052834.1"
                     /translation="MNKFLFAAALIVSGLLVGCNQLTQYTITEQEINQSLAKHNNFSK
                     DIGLPGVADAHIVLTNLTSQIGREEPNKVTLTGDANLDMNSLFGSQKATMKLKLKALP
                     VFDKEKGAIFLKEMEVVDATVQPEKMQTVMQTLLPYLNQALRNYFNQQPAYVLREDGS
                     QGEAMAKKLAKGIEVKPGEIVIPFTD"
     gene            22124..23170
                     /gene="pyrC"
                     /locus_tag="JN001_001568"
     CDS             22124..23170
                     /gene="pyrC"
                     /locus_tag="JN001_001568"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HAY9052835.1"
                     /translation="MTAPSQVLKIRRPDDWHLHLRDGDMLKTVMPYTSEIYGRAIVMP
                     NLAPPVTTVEAAVAYRQRILDAVPAGHNFTPLMTCYLTDSLDPNELERGFNEGVFTAA
                     KLYPANATTNSSHGVTSIDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAHFIES
                     VMEPLRQRLTALKVVFEHITTKDAADYVRDGNERLAATITPQHLMFNRNHMLVGGVRP
                     HLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTAL
                     GSYATVFEEMNALQHFEAFCSVNGPQFYGLPVNDTFIELVREEQQVAESIALTDDTLV
                     PFLAGETVRWSVKQ"
     gene            23244..23489
                     /gene="dinI"
                     /locus_tag="JN001_001569"
     CDS             23244..23489
                     /gene="dinI"
                     /locus_tag="JN001_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein I"
                     /protein_id="HAY9052836.1"
                     /translation="MRIEVTIAKTSPLPAGAIDALAGELSRRIQYAFPDNEGHVSVRY
                     AAANNLSVIGVTKEDKQRISEILQETWESADDWFVSE"
     gene            23779..24033
                     /gene="bssS"
                     /locus_tag="JN001_001570"
     CDS             23779..24033
                     /gene="bssS"
                     /locus_tag="JN001_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309465.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssS"
                     /protein_id="HAY9052837.1"
                     /translation="MEKNNEVIQTHPLVGWDISTVDSYDALMLRLHYQTPNKSEQEGT
                     EVGQTLWLTTDVARQFISILEAGIAKIESGDFPVNEYRRH"
     gene            24148..25266
                     /gene="solA"
                     /locus_tag="JN001_001571"
     CDS             24148..25266
                     /gene="solA"
                     /locus_tag="JN001_001571"
                     /EC_number="1.5.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-methyl-L-tryptophan oxidase"
                     /protein_id="HAY9052838.1"
                     /translation="MKYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPPHQHGSHH
                     GDTRLIRHAYGEGEKYVPLVLRAQTLWDELSRHNEDDPIFVRSGVINLGPADSAFLAN
                     VAHSAEQWQLNVEKLDAQGIMARWPEIRVPDNYIGLFETDSGFLRSELAIKTWIQLAK
                     EAGCAQLFNCPVTAIRHDDDGVTIETVDGEYQAKKAIVCAGTWVKDLLPELPVQPVRK
                     VFAWYQADGRYSVKNKFPAFTGELPNGDQYYGFPAENDALKIGKHNGGQVIHSADERV
                     PFAEVVSDGSEAFPFLRNVLPGIGCCLYGAACTYDNSPDEDFIIDTLPGHDNTLLITG
                     LSGHGFKFASVLGEIAADFAQDKKSDFDLTPFRLSRFQ"
     gene            25314..25427
                     /locus_tag="JN001_001572"
     CDS             25314..25427
                     /locus_tag="JN001_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706980.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2770 domain-containing protein"
                     /protein_id="HAY9052839.1"
                     /translation="MRRLLHYLINNIREHLMLYLFLWGLLAIMDLIYVFYF"
     gene            25688..26254
                     /locus_tag="JN001_001573"
     CDS             25688..26254
                     /locus_tag="JN001_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
                     /protein_id="HAY9052840.1"
                     /translation="MSFTNTPERYGVISAAFHWLSAIIVYGMFTLGLWMVTLSYYDGW
                     YHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAAKAGHLALYLLLF
                     AIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHG
                     FMALKHHFIDKDDTLKRMLGKSSSDYGV"
     gene            26258..26833
                     /locus_tag="JN001_001574"
     CDS             26258..26833
                     /locus_tag="JN001_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceI family protein"
                     /protein_id="HAY9052841.1"
                     /translation="MKKSLLGLTFASLMFSAGSAVAADYKIDKEGQHAFVNFRIQHLG
                     YSWLYGTFEDFDGTFTFDEKNPAADKVNVTINTTSVDTNHAERDKHLRSADFLNTAKY
                     PQATFTSTSVKKDGDELDITGDLTLNGVTKPVTLEAKLIGQGDDPWGGKRAGFEAEGK
                     IKLKDFNIKTDLGPASQEVDLIISVEGVQQK"
     gene            complement(26875..>27461)
                     /locus_tag="JN001_001575"
     CDS             complement(26875..>27461)
                     /locus_tag="JN001_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HAY9052842.1"
                     /translation="NHYEYEVGHFENALEIPADTFREQLPKAVEMMQAHKDKKIVMYC
                     TGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARKAREQGLPVRFIGKNFVFDERMGER
                     ISDEIIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPVCAEKYKGCCSEICCEESALPPE
                     EQRRRRAGRENGNKIFNKSRGRLNTTLGIPDPTE"
BASE COUNT         6588 a         7314 c         6918 g         6641 t
ORIGIN      
        1 gggatgcgtt catataaaaa ctgtgagtaa gcgggtgata aatggtaaaa gtcatcttgc
       61 tataacaagg cttgcagtgg aataatgaag ccgtttccgt gtccatcctt gttaaaacaa
      121 gaaattttac ggaataaccc attttgcccg accgatcatc cacgcagcaa tggcgtaaga
      181 cgtattgatc tttcaggcag ttagcgggct gcgggttgca gtccttaccg gtagatggaa
      241 atatttctgg agagtaatac ccagtctgtt tctttgataa ttgcgctgtt tttccgcatg
      301 aaaaacgggc aaccgacact ctgcgcctct ttgagctgac gataaccgtg aggttggcga
      361 cgcgactaga cacgaggcca tcggttcaca cccggaaagg cgttactttg cccgcagctt
      421 agtcgtcaat gtaagaataa tgagtaagtt acgatgaaaa gaatgttaat caacgcaact
      481 cagcaggaag agttgcgcgt tgcccttgta gatgggcagc gtctgtatga cctggatatc
      541 gaaagtccag ggcacgagca gaaaaaggca aacatctaca aaggtaaaat cacccgcatt
      601 gaaccgagtc tggaagctgc ttttgttgat tacggcgctg aacgtcacgg tttcctccca
      661 ctaaaagaaa ttgcccgcga atatttccct gctaactaca gtgctcatgg tcgtcccaac
      721 attaaagatg tgttgcgtga aggtcaggaa gtcattgttc agatcgataa agaagagcgc
      781 ggcaacaaag gcgcggcatt aaccaccttt atcagtctgg cgggtagcta tctggttctg
      841 atgccgaaca acccgcgcgc gggtggcatt tctcgccgta tcgaaggcga cgaccgtacc
      901 gaattaaaag aagcactggc aagccttgaa ctgccggaag gcatggggct tatcgtgcgc
      961 accgctggcg tcggcaaatc tgctgaggcg ctgcaatggg atttaagctt ccgtctgaaa
     1021 cactgggaag ccatcaaaaa agccgctgaa agccgcccgg ccccgttcct gattcatcag
     1081 gagagcaacg taatcgttcg cgctttccgc gattacttac gccaggacat cggcgaaatc
     1141 cttatcgata acccgaaagt gctcgaactg gcacgtcagc atatcgctgc attaggtcgc
     1201 ccggatttca gcagcaaaat caaactgtac accggcgaga tcccgctgtt cagccactac
     1261 cagatcgagt cgcagatcga gtccgccttc cagcgtgaag tccgtctgcc gtccggtggt
     1321 tcgattgtta tcgacagtac cgaagcgtta actgccatcg acatcaactc cgcacgcgcg
     1381 acccgcggcg gcgatatcga agaaaccgcg tttaacacca acctcgaagc tgccgatgag
     1441 attgctcgtc agctgcgcct gcgtgacctc ggcggcctga ttgttatcga cttcatcgac
     1501 atgacgcctg tacgccacca gcgtgcggta gaaaaccgtc tgcgtgaagc ggtgcgtcag
     1561 gaccgtgcgc gtattcaaat cagccatatt tctcgctttg gcctgctgga aatgtcccgt
     1621 cagcgcctga gcccatcact gggtgaatcc agtcatcacg tttgtccgcg ttgttctggt
     1681 actggcaccg tgcgtgacaa cgaatcgctg tcgctctcta ttctgcgtct gatcgaagaa
     1741 gaagcgctga aagagaacac ccaggaagtt cacgccattg ttcctgtacc aatcgcttct
     1801 tacctgctga atgaaaaacg ttctgcggta aatgccattg aaactcgtca ggacggtgtg
     1861 cgctgcgtga ttgtgccaaa cgatcagatg gaaaccccgc actaccacgt gctgcgcgtg
     1921 cgtaaagggg aagaaacccc aaccttaagc tacatgctgc cgaagctgca tgaagaagcg
     1981 atggcgctgc cgtctgaaga agagttcgct gaacgtaagc gtccggaaca acctgcgctg
     2041 gcaacctttg ccatgccgga tgtgccgcca gcgccaacgc cagctgaacc tgccgcgcct
     2101 gttgtagctc cagcaccgaa agctgcaccg gcaacaccag cagctcctgc acaacctggg
     2161 ctgttgagcc gcttcttcgg cgcactgaaa gcgctgttca gcggtagtga agaaaccaaa
     2221 ccgaccgagc aaccagcacc gaaagcagaa gcgaaaccgg aacgtcaaca ggatcgtcgc
     2281 aagcctcgtc agaacaaccg ccgtgaccgt aatgagcgcc gcgacacccg tagtgaacgt
     2341 actgaaggca gcgataatcg cgaagaaaac cgtcgtaatc gtcgccaggc acagcagcag
     2401 actgccgaga cgcgtgagag ccgtcagcaa gctgaggtaa cggaaaaagc acgtaccacc
     2461 gacgagcagc aagcgccgcg tcgtgaacgt agccgccgcc gtaacgatga taaacgtcag
     2521 gcgcaacaag aagcgaaggc gctgaatgtt gaagagcaat ctgttcagga aaccgaacag
     2581 gaagaacgtg tacgtccggt tcagccgcgt cgtaaacagc gtcagctcaa tcagaaagtg
     2641 cgttacgagc aaagcgtagc cgaagaagcg gtagtcgcac cggtggttga agaaactgcc
     2701 gctgccgaac caattgttca ggaagctcca gctccacgca cagaactggt gaaagtcccg
     2761 ctgccagtcg tagcgcaaac tgcaccagaa cagcaagaag agaacaatgc tgataaccgt
     2821 gacaacggtg gcatgccgcg tcgttctcgc cgctcgcctc gtcacctgcg cgtgagtggt
     2881 cagcgtcgtc gtcgctatcg tgacgagcgt tatccaaccc agtcgccaat gccgttgacc
     2941 gtagcgtgcg cgtctccgga actggcctct ggcaaagtct ggatccgcta tccaattgta
     3001 cgtccgcaag atgtacaagt tgaagagcag cgcgaacagg aagaagtaca agtgcagccg
     3061 atggtgactg aggtccctgt cgccgccgct gtcgaaccgg ttgttagcgc gccagttgtt
     3121 gaagaaatgg ctgaagtcgt agaagccccc gtaccggttg ccgaaccgca accggaagtg
     3181 gttgaaacga cgcatcctga agtgattgcc gccgcggtaa ctgaacagcc gcaggtgatt
     3241 accgagtctg atgttgccgt agcccaggaa gttgcagaac acgcagaacc ggtggttgaa
     3301 ccgcaggaag agacggcaga tattgaagaa gttgccgaaa ctgctgaggt tgtggttgca
     3361 gaacctgaag ttgttgctca acctgccgcg ccagtcgtcg ctgaagtcgc agcagaagtt
     3421 gaaacggtag ccgcggttga accagagatc accgttgagc ataaccacgc taccgcgcca
     3481 atgacgcgcg ctccggcacc ggaatatgtt ccggaggcac cgcatcacag tgactggcag
     3541 cgccctactt ttgccttcga aggtaaaggt gccgcaggtg gtcatacggc aacgcatcat
     3601 gcctctgccg ctcctgcgcg tccgcaacct gttgagtaat aattagctca aagtaatcaa
     3661 gccctggtaa ctgccagggc ttttttattt catgtttgaa tcaacatatt aaaattcatc
     3721 aaatggcatc cttgctaacc aacaatgcaa aataggcaaa aaaaatgccc gccccggcga
     3781 tccctgagcg ggcagacaaa acatacccag tttcatgata tgttttaaag cgagcttatt
     3841 tgttgagctg gaagagcgac aatccctgca tatcggtaaa tgctttatac gatgcctgca
     3901 atgccgtttg ctgcatgatg taagatgaaa tagttgcatt ccagtccaca tcaaccagat
     3961 cgctcatctg ctgcgtttgc cctaaagcgc gatcgctacc taaggaatcc agcgactcca
     4021 gttcgttcag ctgcgtgcct aattccgcgc gaacggcaag gacattattc agcgagtttt
     4081 tcagtccacg gttggtttta tccaatgccg cagcggcgat ttctttatcc gcttcgctat
     4141 ccgcgaccgg cgttttcagg gctgcgatgg cgctatccag catggcaaaa agattggttt
     4201 cagaagcgct accgtctggc tccgcaactg cgttgctggt aatactgtcg aaaattttgt
     4261 cacccgcgtg ccctatcacc atcgaacgcg aagcatcgac ctgttgctta atactttctg
     4321 ctccaccgac gtatttccct ttctcttcgc taaacggcgc agtctctgtt ttataaccgg
     4381 caaaaatgta gcgcccgtta ccgtcagtgg tgttcgccag attcagcaac tggtcacgaa
     4441 gcccctgaat atccgtagcc agcgaggccc ggtcatcgtc actcaaggtg ccattgctgg
     4501 cgtagacaat tttttcctga gcattctgga tagcagtggt gacctggcta agtacactct
     4561 cttccagtga cactttttga atggcgaaag tacgcgccag cgtgtactgg ctgttttgcg
     4621 cctgtgcctg ggagagaact acggcttgtg atgctgcaat gggatcgtca gaagggttaa
     4681 cgactcgctt acctgtcgac atctgctcgc cgtacttcat ccattccgcc tgagaattgg
     4741 tgatgccacg catgttttgc tggtacatca tctgggtact gaaacgcatc ttatctcccc
     4801 ttagcgaatg ttaatcagcg catcaaaaat cgcgtttgcc gtctgcagaa cctgcgcatt
     4861 cgccaggtaa tactgctgaa aacgttgcag atttccgtac tcttcgtcga gattgacgcc
     4921 agagatagac tgctgctgat tggaaagctg cgtcaccaca ttaccttgcg tggcgctact
     4981 ggttttcaac gtcgcggttt tattaccgat atcactcact aacgaggcat aagcgtcgtt
     5041 aaaggatttc gcaccgccca ccgttttact gttgctttgc agatccagca gggcctgacc
     5101 gttgcggtta tcgctatcac ccgcatcttt ttcgctcgcc atcgctattt tcgcttcgtc
     5161 ggtgattaat acatccatgt tgacgatggc gtcacttact ggtttcagcg tgaagctgtc
     5221 gttaacggca ggcgttcctg taaacgtcaa ctccagacca tcaaatgcca ctttaccgtt
     5281 ggcatccggc gtcaccgtaa aagtggtatt gctggcaagg cgggtgacct gccactgatt
     5341 attatcgaac gagattttgt aatctgtcgc cagtaccgcg gaggcatcag ttaccgtggc
     5401 accgatcgca acgtcacctt tgtttttcgt gttttgcaaa accgcgggct taccgatagc
     5461 aaagaaatct tcaccagcat cgccgttggc atcaaatccg gctttgtgtt gggtgttgaa
     5521 agcctcagca aatgccagcg ccagttgtcc aagcgtatta cgcgtctggt ccagatcctg
     5581 agaacggaat gtcagaatgc cgcccagcga cccggtattc agtaatttct ccgggatctc
     5641 aatattgcct gccgtcccat caacgtaagc gacagtcgta cgagaagggt cggcgctgga
     5701 aggaactgcc gccagttgcc gcgccgtact tccctgaacc agtgagtaac cattggccat
     5761 cgtgatgtta taagtgccgc catcctgaac gctgacttct acaccaacaa tctggtttaa
     5821 ttcgctcacc agttgatcgc gttgatccag cagattgtta ggtgacgccc ctgcccccac
     5881 gcctgtcagg cgggagattt ggtcgttcag gctggcgatt tgtttagcgt aattgttgat
     5941 ctgatcaacg ctggcaccta tcgcgatatt gacctgtttg tcctggtcgc gaagatactg
     6001 atcggtggtt ttaaactgat tcaccaaccc ttctgatttc ccaatcagcg cctggcgcgc
     6061 tgccgggtct tccgcgttac tcaccagcgt ttgcaggctg gtgaagaaat cctgcatctg
     6121 tgttgccagc gaagaggtac tggtggagag catattgtcg attttcgaca tctgctcata
     6181 gcgggcagtc aggccgctac tttgcgtctg cgccgcacgt aactggttgg tgataaacgc
     6241 atcatactca cgctgcacac cagaaacgta gacaccattg ccaacccagc cgccagcgcc
     6301 caacgtgcta ttggcctgcg ccataatagt ggtttggcgg gtatatccgg caacgttata
     6361 gctggagata ttattacttg ccgtatttaa cgccgcctgg gccgcgttca gtccgctcat
     6421 ggcgttatta atcaagctgg acatggaggt tccttataag ccttcaatta cagagtatta
     6481 tcggcagcga cccgccggac ttgagttatt caaaacagat tatcaatgtt catactgtag
     6541 gttttgctca ccttgtcgct tatcgatttc atctgctgaa tcatgttggt gagtttgcgg
     6601 gcatagtgag gatcggtggc atagcccgcg tcctgtaggg cctgcgcccc cgctccgcac
     6661 tcgtggcggt ggtcacggcg gcgtagcgcg ggttacgcgt taacagccca acgtaatccg
     6721 actatgcttc cagatacgag ctgtagaccc gaaacttcgc ttttactttc ttcgcttcgc
     6781 cgttttcata ttcagtcgtg gtgatttcag taactggccc tttccagttg ccagaggctt
     6841 tgacaccaaa caggttatag ctcggctcgc cgttttcgcg gcggatttgc cgttgccccc
     6901 aaccagattc cagcgccgcc tgagcgagga tcaaatgatg tggcacaccg ctttgctggc
     6961 ttgccagttg ggcgggcagc gagagttgcg cgaggaatgc tttactgtca cccggcagcg
     7021 aatcatcgta gttacgtggc acggcctttt gcaccagctg cgaaagcgcc tgattttgat
     7081 aacgcaccac agtttcgagc gggaatttca tcggtgctgc tggcgtggac tcctctggca
     7141 atggttgttc tggcgtcatc tgtttaacca tcatctctgc aagccccaga cctttgcccg
     7201 ccgtcatctg ttgggcaatc tgctggtcat acatactggt atacaggcga gtgtgctcgc
     7261 tgctgaacag gccatctttt ggtaaagcgt cgcgcatgct tttcaacatc atctgcacga
     7321 acatcccttc cacctgacgg gccaccggac ggatatttgc cgccggatct tcgcccgctt
     7381 tcgcctttag ttcgttgagt gattgcgcat cccaggccgc acttgccagt agtttgctat
     7441 cgctgatcat cagatgattt ccagttttgc ccgcagacat cccgcacttt gcattgattg
     7501 cagtatggac atcagatcca tcggcgtagc gcccagcgca ttgagcgcgc gcaccacgtt
     7561 attgagcctg gcgctggaac gtacgctttg cagcgaaccg ccgctctggc gtaaatcgat
     7621 ctgcgtttgt ggagtaacca cagtctgtcc accaccaaac ggtgtatctg gctggctgac
     7681 attggcctga cgattaactg ttactgagag attcccctgc gctaccgcgc agctgtcgag
     7741 ggtcacttcg cgattcatca ccaccgaacc ggtgcgcgag ttaatcacta ctttagcgtc
     7801 ctgcggggtg acattaacct gcatattctg gatatcggca aggaagcgga cctgggaact
     7861 gttgccactc ggtacgcgca cctgaatagt ccgcgcatct aacgcggtgg cgctgccata
     7921 tccacgcacg cggttgatgg tgtcagcgat ttgctgcgcc atgctgaaat cttcgtcgtt
     7981 aagttgcaaa ttaagggtat tcccgacgcc aaactggctg ggcaattcac gttcaataac
     8041 cgcaccattg gtgatccgtc caccgttcag ttggttaacc tgaacactgc taccgccagc
     8101 ggaggctcct gcgccgccaa ccagaatatt gccctgcgcc agcgcataca cctgactgtc
     8161 aacgccctta agcggtgtca tcaacaacgt acctccacgc aagcttttgg cattacccat
     8221 ggaagaaacc accacatcga tggtttgccc ctgacgtcca aacggaggaa gtgacgctgt
     8281 caccattacc gcagcgacgt tttttagctg catattggtg cccgtcggaa cggtaattcc
     8341 cagctgtgag agcatgttat taagcgtttg tgtggtaaac ggcgtctggg ttgtctggtc
     8401 accggtgcca tccagcccca ccaccagacc atagccaatc agtgagtttt gccttacccc
     8461 ctgaacactg gtgagatcgc gaatacgctc agcctgagcc gccgtcgtga ccagtagaag
     8521 aattaatgca gagagaaatt taatcaccac agcctcactt acattggcga caggttaagg
     8581 aagaaacgct gcaaccagcc catattttgc gcttcgttaa tgtagccatt gcctacgtat
     8641 tcaatgcgcg catccaccac ctgagtagac ggtacggtat tgctgccgct gatagtgcgt
     8701 ggattaacca cgccagagaa gcgaataaat tcggtaccct gattaatggc aatctgtttt
     8761 tcacccacca catgcaggtt gccgttgacc agtacctggt caaccgtcac cgtcaacgtg
     8821 ccgctaaagg tattgctggc attggccccg ccctttccgt tgaacgtgtt accaccggag
     8881 gcttcgacat cggcacgagc gttaccaaac agcccctgca aatagcgcgg cacagtatca
     8941 aagccaaaat tagttttacc gtcacggctg gcattcgcag aggagctttt gctggcgctg
     9001 acgttctcct gcaacacgat ggtcagcgta tcgccaatat tgcgtggtcg acgatcttca
     9061 aacagcggtt gatagccata gttaatcggc tgagcagact ggaaaataga accgttggcg
     9121 acgggcgtcg gaccgggaac cggttgtgca ctggtcgccc cctgcaccag cggcgtggag
     9181 ggtatccagg cgcagccggt tagtgaaagc accaacaagc tggaaatggc ataagtatgc
     9241 gcagcgtttt tttgcatggc tatcatcttc aaaaatcagt aaaccggtga acctgccacc
     9301 ggttaagcct tagagttgcg tcagtttttg ctgcatctga tcggtggtgg acaccgcttt
     9361 actgttgatt tcgtaagcgc gttgcacctg aatcatattg accagttctt ccgccacgtt
     9421 gacgttagac gtttcaacat acccttgata cagcaatccc gcgccgttca ggcccggcgt
     9481 gctttcgttc ggtgcaccag aggattgcgt ttcggtgtag aggttttcgc caatgctctc
     9541 cagcccggtg tcattcataa aggtggtgag attgagctgc ccaacctgaa ccggagctgc
     9601 ctggccttgt tgggttacgc tgaccacgcc atcacgaccg atggtgatac ttaacgcatt
     9661 cgccggaatg gtgatcgctg gctgcacctg aaaaccacca gccgtcacca gctgcccgtt
     9721 ctgatccacc tggaaagagc cgtcacgggt ataggctgat gaaccatctg gcaacatcac
     9781 ctggaaaaag ccctgccctt taatcgcgac atctttgctg ttgttggtct gcgacagatt
     9841 tccctggctg tgtaagcgtt cagtggcgac cgggcgtacc cccgtgccga tttgtaatcc
     9901 ggagggtaag gtggtttgtt cggaagactg tgcccccggc tggcgaatgg tttgataaag
     9961 cagatcttca aacaccgcgc gctgacgctt aaaaccgtta gtactgacgt ttgccaggtt
    10021 gttggcaatg acgtccatat tggtttgctg ggcgtcaagg cccgttttgg cgatccataa
    10081 tgaactgatc ataaaatgtc ctgtagtgga ttagtgacaa gcagagcaga agcacgcgac
    10141 agtgtgaatt ccccctcact ctaaccctct ccccaaaggg gcgagggaat agtccgcgcg
    10201 cttttattgc aatgtcatca atcgttcaat taactcatcg acagcagttg gttggcacgg
    10261 cctgcgttat catcgacgct gctgatcacc ttcatctgca tttcaaaacg ccgcgcgctg
    10321 gcaatcatgt cgctcattgc cgcaacggca ttgacgttac tgccttccag aacccccgac
    10381 atcacacgca aggttggatc tgcctgcagt accggccctc gcgtggcctg ggtttctgcg
    10441 cttaaacgaa aaatgccgtc gtcaccgcgc tgcacttcgc tgcccgtggc tttcaccagt
    10501 ttcagacgcc ctactggcgc aactgtattt gccggatcgc ccggattgag cgccgagatt
    10561 gtgccatcgg cagcaatagt gatttccgct ccttccggca cagcaattgg ccccgcctcg
    10621 cctatcacct gatgcccctg aattgtcagt tgcccggtgg gatcaacctg aatgctgcca
    10681 ttacgcgtat acccttcgct gccgtcagcg gtctgcacgg ccagccagcc atcctgctgc
    10741 aacgcaacgt ccagcgggcg cgaggtgtaa tctatcttgc cgggcgtcat gtctgcaccc
    10801 ggtgttgacg ccgttaccag cgtgcgcgtg ggcagtgaaa gcccttccac cggcactgcg
    10861 cgcaaggcgt ttaactgcgc gcgaaaaccg ggcgtagagg cattggccag attactggcg
    10921 gttaccgcct gttgattcag cgtctggctg gctgctccca tcgcagtata aattgcgtga
    10981 tccattgagc tatcccgtca gcgattagcg taagttaacc agcgtgttga ggatctggtc
    11041 ctgggttttg atggtctggg cgttagactg atagttacgc tgggcaacga tcatattgac
    11101 cagttcttta ctgagatcga cgttggacgc ttccagcgca ccgttggtca gggtgccaaa
    11161 gtttcccgtc ccggctgtcc ccaacagcgc cacgccagaa gattgcgtcg cagaccagac
    11221 gttgtcgcct tcggatgcca gaccttcgtt gttggcaaag ttcgccagta caatctgccc
    11281 cagcagttga gtttgttcgt tggaatagtt gccgacaacc gtaccgtcat cattgatttg
    11341 ataactcacc agatcgcccg gtttgtagcc gttctggggg gttgccacaa tattgttagc
    11401 gccggtattt tgctgcatgg agttgaggaa gctcagacta aacgtggcgg gttctgcacc
    11461 gttaattgcg ccggttgcga tattattcgc catcgcacca tccactaatg tgccattagc
    11521 attaaattcc agtgttgtcg ctgtcttcgc aatgctgttt ggatcactgc tatcctgggt
    11581 gtagacctgc cagttattat ccccggtctt cacaaagtag acgctcatgt catgagcatt
    11641 accctgactg tcgaaaacag tcaccgaacc ttttttgtta tagctatccg cattgctggc
    11701 gctgaatggc gtaacagtag gaagcggatc actggaattc aggttgatct gcatcgacgc
    11761 cgtggtggta gttttcgctg ccatcagggt attcgggatc gaaatattgg tcggattcgc
    11821 cccttgctga atagtcggcg gcgtaccggt tgccgggtaa cccgtcagct gtaaaccttg
    11881 catattcacc aggttacggt tttcatccag cttaaattgt ccgttacggc tgtagaacac
    11941 cgaaccgttg ctgtctacca gacggaaaaa accgttctgg ctgatagcaa cgtccagacc
    12001 tcgcccggtg ttggtggtcg tgccatctgt aaagtcctga gtgataccgg caacttttac
    12061 ccccagtccc actttcgaac cggcaaacat atcggcaaaa gaggccgtgc ctgatttaaa
    12121 gccgtaggtg gcggagttgg caatattgtt gccaataaca tcgaggttag tggcggcagc
    12181 gtttaatccg ctaaccgctt gagaaaaggc catgactgac tcctgaaatg tgaaggctta
    12241 aattatctgc cgtacttcgt cgagggtggt ggtgccgtaa gtgccgagat ccagcgtatt
    12301 accgctgttg ccgcggatca caccctgcac cagagcaaac tgcagcggct gggcaaccag
    12361 ttgtgtacca ccgttactgg cggtaatcgc tacattgtaa gaaccgttcg gcgcagtgct
    12421 gccatcagtc aacgtaccgt cccaggtgaa actgtgaact ccggcggtca gttcaccaat
    12481 atcaatggtg cgcacaaccg cgccattttt atcggtgatg gtggccgtaa ctttgtctgc
    12541 cgcctgttgc agctcaacac caaacggcgt ggtcgtggtc acagcccctt cttcactgcc
    12601 ggttcccgca agaacagttg tgccggggat catcacgccg tgaccgatca ggttactggc
    12661 ctgtaacgac tggctgttat caatctgtcc ggaaatagat ccgagcatgg tattgagttt
    12721 ttcaatcccg ctgaccgtgc tgatttgtgc caattgcgac gtcagctcgt tgttttccat
    12781 tggattggtc gggtcctggt ttttcagctg cgccaccagc aaagtcagaa aactgctttg
    12841 taaatctgcg gcgttgctgc ccgtgagcga actactgctg gtggtactga cgccggtatt
    12901 tgtcggatcg gtggtggtta ccgcaatgga catagctttc tcctttattg accgagcgta
    12961 agggttttca gcatcatgct tttcaccgtg ttgagcactt caacattggc ctgatagctg
    13021 cgtgacgccg acatggtgtt aaccatctct ccgacaacat caacgttcgg catttttacg
    13081 tagccctttg catccgccag cggattaccc ggttcataaa ccagtttgtc cggggcctga
    13141 ctttctataa catcggcaac ctttacgccg cctgtcgcag cacctggtgc agcgttaacc
    13201 tggaatacca cctgttttgc ccgatatggc tgtccatcgg gaccggtcac gctatcagca
    13261 ttcgccagat tactggccgc cacgttcagg cgctgggact gggcagttaa cgccgacccg
    13321 gcgatatcaa aaatattcag cagtgccatc cgttaatttc cgctctgtaa aacgttcatc
    13381 atgcctttga tttgcccgct caacgcacta aggctcatct ggtattgcag ttctgcggta
    13441 ggaggcgtca gcgcctgcgc cggaatgtgt tgcgttgagg tcatcgtcag agcaaccaca
    13501 ctggttgcat cccgtccacg ttgcatgact tttttaagtt cactggcaaa atcgatatcg
    13561 cgcgcctgat aaccaagggt atcggcattg gcgatgtttg ctgccagcac ttcctgacgc
    13621 tgggcgcgca gattgagcgc ctcttgttga aaacgtaagg cggcgtcgag cttatcgagc
    13681 atatctcctc cgcaggtatc aaaattctgc catcagctta aatgccttta cgcgcgcgtt
    13741 atcggcggaa taaacgcaaa atgggtcgct atttatgccg ttgatgacca ttggggacgg
    13801 gtacaattca cgttgtagaa atagctgggg ggcgaaaatg ctggcaataa aacgtagcgt
    13861 ggcgatcatc gcgatactgt tcagtccgtt aagtgcggcg agcaatctca catcgcaatt
    13921 gcacaccttt tttagcgccc agctcgtggg ggtaagtgat gaggttcgtg tttctattcg
    13981 tacagcaccc aatctactac cgccgtgcga gcagccattg ctttcgatga gcaataattc
    14041 ccgcctgtgg ggcaatgtga atgtgttggc acgctgcggt aacgacaaac gatatttaca
    14101 ggttaatgtg caggccacag gaaattatgt ggttgccgcg atgcccattg tgcggggagg
    14161 aaagctggaa gctggcaatg tcaaactaaa acgcggacga ctggataccc tgccaccgcg
    14221 tacggtgctg gatatcaatc aacttgttga tgccattagc ctacgcgatc tatcacccga
    14281 tcaaccaatc caattaaccc attttcgcca ggcatggcgg gtaaaagcgg gacaacgcgt
    14341 caacgtgatc gccagcggtg acgggtttag cgccaacgca gaaggtcagg cgctgaacaa
    14401 tgcagccgtc gcacagaatg cgcggatgcg catggtatcg ggactggtgg tcagcggcgt
    14461 tgttgatgca gatgggaata ttcttataaa cctgtaagct gttaaagatt acccgtccct
    14521 tgccgataaa taagcaacac atgataaaag cgccctcaat gaggaataaa ccatgagtat
    14581 tgatcgcact tcgcctctga atcccgtaag caccgttcaa ccgcgcgaaa ccactgacgc
    14641 gccggtaacg aacacccggg cggcaaaaac aaccgactcc accagcacca gcaccagcac
    14701 cagcaccagc accagcacca gcaccagtgt gacgttaagc gacgcgcaag caaaactgat
    14761 gcaacccggc agcagtgata tcaatcttga acgtgtcgaa gcgttaaaac tggcgattcg
    14821 taacggtgaa ctaaaaatgg acatcggcaa aattgccgat gcgctgatca acgaagctca
    14881 gcaagacttg cagagtaact gatcgtatga cacgtcttgc agagatcctt gaccagatgt
    14941 ccgctgtgct taacgatctc aaaacggtaa tggatcaaga gcagcaacat ctctctatgg
    15001 ggcagatcaa cggcagccag ttgcaatgga ttacagaaca aaaaagctca ctgctggcga
    15061 cgctggatta cctcgaacag ttacgcaaga aagaacccaa tacagcaaat agcgttgata
    15121 ttagtcaacg ctggcaggaa attactgtga aaacgcagca actacgccaa atgaatcaac
    15181 ataacggttg gttactggaa ggacagattg agcgcaatca acaggcgctg gaaatgttga
    15241 aaccgcatca ggaaccgacg ctatatgggg cgaacggtca gacctcaaca acccatcgcg
    15301 gcggtaaaaa gatttcgatc tgaagattat ctccggcctg cactgcaggc cggaatgcat
    15361 tgttacaccg tccggcgggc aaattcttta actttgaagc ccagtaccgc cagtgcagcg
    15421 aagtacgcgg caatccccgc cagcacgacc gccattaaac gcagtaagcg ccagggcatg
    15481 gtacccaatg accactccgg catgatatgt aacataccta aaagcacgcc agacatcacc
    15541 agtaccgcca ccaccagacg caacagaaac gccatccagc cgggttgcgg agtaaagatt
    15601 ttctgcttac gcaactgcca gtaaagcagc gaagcattca gacacgccgc cagaccaata
    15661 gaaagtgaca gcccggcatg tttcaacgga ccaataaacg ccaggttcat caattgcgtt
    15721 aaaatcagcg taacgatggc aattttcact ggcgttttaa tgtcctggcg ggaataaaag
    15781 ccaggagcca acactttcac tacaatcagg ccaatcaaac ccaccgagta ggcaattaac
    15841 gcccgctggg tcatcagcgc atcaaacgcg gtaaatttac cgtactggaa cagcgaaacg
    15901 gttaacggac ctgaaagaat gcccaacgca accgcactcg gcagcgccaa caggaaacaa
    15961 agacgcaacc cccagtccat caaacggttg tattcatcat gattgccact ggcaaaactt
    16021 ttcgacagcg acggcagcaa aatggtgcca agcgccacgc ccagcacacc ggacggaaac
    16081 tccattaagc ggtcggcgta atacatccaa gacaccgaac cggaagcaag aaacgaggca
    16141 aaaatggtgt tgatgattaa ggagatctgg ctcacagaga cgccaaggat cgccggtccc
    16201 atctgtttca ccacgcgcat tgctccggca tcgtggaagt taatgcgcgg caggaccagc
    16261 atgccgatct tcttcaggtg cggtagctga tacaccagct gcaggatgcc gccgaccgta
    16321 acagcccacg ccagcgccag caccggtggg ttaaagtacg gtgcggcaaa cagcgcgaaa
    16381 ccaatcatgc tgatgttaag cagtgttggc gcaaacgccg gaatcgagaa gcggttccac
    16441 gtattcagaa tcgctcccac cagcgacgcc agggagatca gcaagatata gggaaaggta
    16501 atctttagta gctggctggt cagggcaaat ttgtcagctg tatcagcgaa gcctggcgcg
    16561 gtcaccatga tcacccacgg tgcggcgagc atgccagcga ccgtcacaac cgccagcgca
    16621 agtgtcagca ggccagaaac ataagagaca aagacccgcg tggcgtcttc accctgctta
    16681 cttttatatt ccgccagaat cggtacaaat gcctgggaaa atgccccttc ggcaaagata
    16741 cggcgtaaca agttaggaag tttaaaagcg acgaaaaagg cgtcggttgc catccctgcg
    16801 ccaaagattc tggcgacaat tgcgtctcgt gcgaagccaa gcacacgcga aaacatggtc
    16861 atcgagctga cggcggccag cgattttaat aaattcatcg gtgttctaat ccagaccaac
    16921 gggcaaaacg cctgcaagac aggcgctgaa agaggcgaat agtctacctg gattatggtg
    16981 aattgctacc gccagatgtt acagggttta ttcactcatc gcatcgcgcc agatcttgtc
    17041 aacgatacgt tgcgccagca cggcctattc gccggcggtt tgcggaactg tctgattttg
    17101 cacacattca atgaagtgcc gcgcacagcc gacaaatcca cgttgttcaa gagtgctctg
    17161 ccaaccagga atcggtttat gcactacgcc ctgcccgcgc tcctcacgcc attcgcgcat
    17221 atccgtaatg tcgatgagcg caccgtcagt cacggcctgc acggtttcac gctgacttcc
    17281 ggcacggcga tgcatacagg tggtgatctg caaaggaccg gccgaaaaat ggtgctcggc
    17341 aaacagcatt tcgccagcgt cgttagtcag tagcgtaccg ccatccagag aggctttgcc
    17401 gcccgacaac cacagcgcgg tatccaccac atgcagataa tcatccagca acgtgaaata
    17461 aagatcgtgt ggcccgacac tattgctacg atgtttatcc attcttagcg aagctgcggt
    17521 agcgagttgc gtttttaact caccgtagag tggtgcgaaa cgacggttaa aaccgaccat
    17581 caacgtcagt tttttccgcg ccgccagttc caccagccgt tcagcatcgc gcagattttc
    17641 tgccagcggt ttatcgacac agacatgtac acccgcattg agtaacgtac tgaccacgtc
    17701 aaagtggctg gcggtgctgg aatgcacaaa aaccgcatcg caactggcgg caaggctgga
    17761 taacgaatcg gcataaggaa tgcgccagct ttcacaaatt ggcagggctt tcgcgcgcgt
    17821 aggcgaccag gctccttgta acatccagtc agacgctgcc gccagcaccg gtaaccacgc
    17881 tttttgcgca atgccgccta atcccacaac gccgatacgt aattttttca ctttaatctc
    17941 ccagatgggc cagcaacgaa tcaagacgct gtttcagttc tgccacttcg atttccaggg
    18001 cttcgacgcg ggcctgtaaa tcaccatcaa ccgcgttcga catatccgtt accgccggct
    18061 gatcctctac ctcaccactg aaaagatgca tgtagcggct ttcgcgttta cccggttcgc
    18121 gggccagacg caccacaaaa ggaccatctt cgcgatttgc cagttgttcc agcgtcgact
    18181 ccaattccgc catatcgctg aattcataca ttcgcgcggc gcggctgcgc agttcacccg
    18241 gcgtctgggc accacgcaat aacaacgtgg tgattaacgc cacttccgct gcgctcagtt
    18301 tcagatcgcc aaattctgaa ttacaaaaac gttgttcata tttggtgacc cgattaccaa
    18361 agccactcac cgtgcgcaga taatggcgtt tgaccagatt atccagttgc tcctgcactt
    18421 cagattcact cagattcatg accggttcac ggttcgtttt ctgattacag gccgtgacta
    18481 caccattgac tgagagcggg tattgctccg gcgtggtcac ctgcttttcc agcaagcaac
    18541 caatcacgcg agcttcaagg gcagtaagtt gatatttcat gagattctcc ttagcggccg
    18601 ggcgtccagt ctggggtagt taatgccgtc agtacgtgat cgcgccattg tccatcaatc
    18661 aacagatagt ctttcgcata gccttctttt tcaaaaccca gtcgcgccag taaatcaccg
    18721 ctgcgtttat tgtgcggcat ataattagcc ataatgcgat gaatatgttg ggtgcgctgc
    18781 atataacgaa tggctgcggt cagggcttca aacatgagtc ctttgccctg ccatttttgc
    18841 ccaatcgaat aaccgagata gcaggcatga aaagagccac gaacaacatt ggaaaaattg
    18901 gcaacgccaa taatctcttt ttcgtccggg tcgaataagc caaagtagaa agctgaacct
    18961 tgtttatgaa attcgttaat catccccagc ctggcctgcc agcctgatgg ataacagtgg
    19021 ctttcgtcgc gcactggctc ccagggcttg aggaaatggc gattctctgc gtaataatcc
    19081 gcaagacgcc aggcatcacg atcatgcacc agacgcacga ccagtcggtc tgtggttaag
    19141 cgcacttttg gcacgttact gcgatagcca aacattctat acctactcct tcccgtaacg
    19201 tctttaatac gctgtaagta ttactatacc tgcgcaacca gaccctgtga aaagtccaaa
    19261 atgccatttt ctgcattatt cacatatttg ataaaaactc tctatcaaag cgacgttttg
    19321 ataaaaaaat attgtccccg aagtgatggg aaaagtctta gcggcaatgc agaatagaaa
    19381 gtgctcatct tttatttccc gggaggggaa atgtcccgcg tatcgcaggc gaggaacctg
    19441 ggtaaatatt tcctgctcat cgataatatg ctggtcgtgc tggggttctt tgttgtcttc
    19501 ccgctgatct ctatccgctt cgttgatcaa atgggctggg ccgccgtcat ggtcggtatt
    19561 gctctcggtc tacgccagtt tattcagcaa ggtctgggta ttttcggcgg cgcaattgcc
    19621 gaccgctttg gtgccaaacc gatgattgtt accggtatgc tgatgcgcgc cgccggattc
    19681 gccacaatgg gtatcgccca cgaaccgtgg ctattgtggt tttcatgcct gctctcggga
    19741 ctcggcggca cgttgtttga tccgccgcgt tcggcgctgg tggtgaaact aatccgtcca
    19801 caacaacgtg gtcgtttttt ctcgctgttg atgatgcagg acagtgccgg tgcggtcatt
    19861 ggcgcattgt tggggagctg gctgttgcaa tacgactttc gcctggtctg cgccacaggg
    19921 gccgttttgt ttgtgctgtg tgcggcgttc aatgcgtggt tgttaccggc atggaaactc
    19981 tccaccgtac gcacgcccgt tcgcgaaggc atgacccgcg tgatgcgtga caagcgtttt
    20041 gtcacctatg tcctgacgct ggcgggttac tacatgctgg ctgtacaagt gatgctgcca
    20101 attatggtca acgacgtggc tggcgcgccc tctgccgtta aatggatgta tgccattgaa
    20161 gcgtgtctgt cgttaacgtt gctctaccct atcgcccgct ggagtgaaaa gcattttcgt
    20221 ctggaacacc ggttgatggc tgggctgttg ataatgtcat taagcatgat gccggtgggc
    20281 atggtcagcg gcctgcaaca acttttcacc ctgatttgtc tgttttatat cgggtcgatc
    20341 attgccgagc ctgcgcgtga aaccttaagt gcttcgctgg cggacgcaag agctcgcggc
    20401 agctatatgg ggtttagccg tctgggtctg gcgattggcg gcgctattgg ttatatcggt
    20461 ggtggctggc tgtttgacct gggcaaatcg gcgcaccagc cagagcttcc gtggatgatg
    20521 ctgggaatta ttggcatctt cactttcctt gcgctgggtt ggcagtttag tcagaaacgc
    20581 gccgcgcgtc gtttgctgga acgcgacgcc tgatttgata ctcccccctg actcctccat
    20641 actgaaagtg aactgacagc caaatggagg agtcacgtga agctatacat ttacgatcac
    20701 tgcccttact gcctcaaagc ccgcatgatt ttcggcctga aaaatatccc cgtcgaatta
    20761 catgttctgc tcaacgacga cgcagaaaca cccacccgga tggtcggtca aaaacaggtt
    20821 cccattctgc aaaaagatga cagccgctat atgccagaaa gcatggatat cgttcactat
    20881 gtcgataaac tcgacggcaa accgttactg accggcaaac gttcccctgc cattgaagag
    20941 tggctgcgca aggtcaatgg ctacgccaac aaactgctgt tgccgcgttt tgccaaatcg
    21001 gcatttgatg agttttctac tcccgccgcg cgcaaatatt tcgtcgacaa gaaagaggcc
    21061 agcgcgggta attttgccga cctgctggcc cactctgacg gtctgattaa gaatatcagc
    21121 gatgatttgc gtgcgctgga caaactgatc gtcaaaccga acgccgtgaa tggagaactt
    21181 tcggaagatg atattcagct atttccgcta ctgcgtaatc tgacgctggt agccggaatc
    21241 aactggccaa gccgcgttgc tgattaccgc gataatatgg cgaaacagac acaaatcaat
    21301 ttgttatcat caatggcgat ttaatcctga cccgccgcgg cagcctgtat tcgcgggttg
    21361 ccgccgtttt cagttttttc tgctggcgag tttatcgctg gtgacacatg ctgcgttgtg
    21421 tcaggatatt gacgcagatt tcatgtcgag gactaccatg aacaagtttt tatttgccgc
    21481 tgcattgatc gtcagtggcc tgctcgttgg ctgtaatcaa ctcacccaat acaccatcac
    21541 cgaacaagaa attaaccagt cgcttgcgaa acataataat ttctcaaaag atatcggttt
    21601 acccggcgtg gctgacgccc atattgttct gacaaacttg accagccaaa ttggtcgcga
    21661 agagccgaat aaggttaccc taaccggaga cgccaatctg gacatgaact ccctgttcgg
    21721 tagtcagaaa gcgaccatga aactgaagct gaaagcgctg cccgtgtttg ataaagaaaa
    21781 aggtgcgatc ttcctgaaag agatggaagt ggtcgatgcg acggtacaac cggaaaaaat
    21841 gcaaacggtg atgcaaacgt tgcttcccta tttgaaccag gcattacgca attactttaa
    21901 ccagcaacct gcttacgtcc tgcgcgaaga tggcagtcag ggcgaagcaa tggcgaaaaa
    21961 actggcgaaa ggcattgaag tgaagccagg cgaaattgtc attccgttta cggattaatg
    22021 acgagggcgc attcgcgccc tttatttttc gtgcaaagga aaacgtttcc gcttatcctt
    22081 tgtgtccggc aaaaacatcc cttcagccgg agcatagaga ttaatgactg caccatccca
    22141 ggtattaaag atccgccgcc cagacgactg gcaccttcac ctccgcgatg gcgacatgtt
    22201 aaaaactgtc atgccgtata ccagcgaaat ttatggacgg gctattgtaa tgcccaatct
    22261 ggctccgccc gtgaccactg ttgaggctgc cgtggcgtat cgccagcgta ttcttgatgc
    22321 cgtacctgcc gggcacaatt tcaccccatt gatgacctgt tatttaacag attcgctgga
    22381 tcctaatgag ctggagcgcg gatttaacga aggcgtgttc accgctgcaa aactttatcc
    22441 ggcaaacgca accactaact ccagccacgg cgtgacgtca attgacgcaa tcatgccggt
    22501 acttgagcgc atggaaaaaa tcggtatgcc gctactggtg catggtgaag tgacacatgc
    22561 agatatcgac atttttgatc gtgaagcgca ctttatagaa agcgtgatgg aacctctgcg
    22621 ccagcgcctg actgcgctga aagtcgtttt tgagcacatc accaccaaag atgctgccga
    22681 ctatgtccgt gacggaaatg aacggctggc tgccaccatc actccgcagc atctgatgtt
    22741 taaccgcaac catatgctgg ttggtggcgt gcgtccgcac ctgtattgtt tacccatcct
    22801 caaacgcaat attcaccaac aggcattgcg tgaactggtc gccagcggtt ttaatcgagt
    22861 attcctcggt acggattctg cgccacatgc acgtcatcgc aaagagagca gttgcggctg
    22921 cgcgggctgc ttcaacgccc caaccgcgct gggcagttac gctaccgtct ttgaagagat
    22981 gaatgctctg cagcactttg aagcattctg ttctgtaaac ggcccgcagt tctatggctt
    23041 gccggtcaac gacacattca tcgaactggt acgtgaagag caacaggttg ctgaaagcat
    23101 cgcactgact gatgacaccc tggtgccatt cctcgccggg gaaacggtac gctggtccgt
    23161 taaacaataa aaatcgtagc ttcctgttgt cattaggtta ttttacctgt ataaataacc
    23221 agtatattca acagggggct attatgcgaa ttgaagtcac catagcgaaa acttctccat
    23281 tgccagctgg ggctattgac gccctggctg gcgaactttc ccgccgtatt cagtatgcgt
    23341 ttcctgataa tgaaggccac gtatcggtac gttatgccgc agcgaataat ttatcggtta
    23401 ttggcgtaac aaaagaagat aaacagcgca ttagcgaaat tctccaggaa acgtgggaaa
    23461 gcgccgatga ctggtttgtc agcgaataat atgcagtgat ttttgttttt gccgggtcgc
    23521 cccggctttt ttattttact tacaaatttt gagtacaaaa tttctacact tcctcaaaat
    23581 aattgcacaa tatgctaaaa aaatatgaat gacatgctgt tttattgttc atataaatct
    23641 taaaagcaga aatttatctg ttcccccctt taaaaattcg gtgaataccc ttacttattg
    23701 gtatactgaa gttgcttcag ataaaaacgc attgaacctc gaataacgtt gtctagtaac
    23761 acgaattagg gggccatgat ggaaaaaaat aatgaagtca ttcagactca tccgctcgta
    23821 gggtgggaca tcagcaccgt tgatagctat gatgcgctga tgttgcgttt gcactaccag
    23881 accccaaata agtccgagca ggaagggact gaagttggtc agacgctctg gttaaccact
    23941 gatgttgcca gacaatttat ttcgatatta gaagcaggaa tcgccaaaat tgaatccggt
    24001 gatttcccgg taaacgagta tcggcgtcat taacatgaca tgaccatcca cccaaaaggc
    24061 acctcaccgg tgcctttacc atttctgggt tgtatatctg cattcagtta attactctgc
    24121 ttaaaccatg agagcagaga gaaaaaaatg aaatacgatc tcatcattat tggcagcggt
    24181 tccgtaggcg ctgccgccgg gtattatgca acccgcgccg gtttaaacgt gctaatgacc
    24241 gacgcccata tgccaccgca tcaacacggc agccaccacg gcgatacgcg attaattcgc
    24301 catgcttatg gtgaaggcga aaagtatgtc ccgttggtcc tccgcgcgca aacgctgtgg
    24361 gatgaacttt cccgccacaa cgaagatgat cccatttttg tacgctctgg tgtcattaac
    24421 ctcggcccgg ctgactccgc atttctcgcc aacgtcgccc acagcgccga acagtggcaa
    24481 ctcaacgttg aaaagctcga tgcgcaaggg attatggccc gctggccaga aatacgcgtc
    24541 ccggacaact acatcggctt atttgagact gattccggtt ttttgcgcag cgaactggcg
    24601 attaaaacct ggatccaact ggcgaaggaa gcgggctgtg cgcaactgtt caactgcccg
    24661 gtcaccgcaa ttcgtcatga cgatgatggc gtaactattg aaaccgttga cggtgagtat
    24721 caggcgaaaa aagcgattgt ctgcgcggga acatgggtaa aagacctgct cccggagctg
    24781 cctgtccagc ctgtacgtaa agtatttgcc tggtatcagg ccgatggccg ctatagcgtg
    24841 aagaataaat tcccggcgtt taccggtgaa ctgcccaatg gcgatcaata ttatggtttt
    24901 ccggcagaaa acgacgcgtt gaagattggc aaacataacg gaggccaggt tatccattca
    24961 gcggatgaac gtgttccgtt tgcggaagtg gtcagcgatg gttcggaagc cttcccgttc
    25021 ttgcgcaatg tattgccggg tatcggttgc tgcctgtacg gcgctgcctg cacctatgat
    25081 aattcgcctg acgaagattt tattatcgat accctacccg gccacgataa tacactgctc
    25141 attaccggcc tgagtgggca cggttttaaa tttgcgtcag ttttagggga aatagctgcc
    25201 gattttgcgc aagacaaaaa aagcgatttt gatttgacgc cattcaggct ttcccgcttc
    25261 caataatcat cattacggcc tccagaatga ggccgttttt acaggagtat ttaatgcgtc
    25321 ggctgttgca ctatctcatc aataatattc gcgagcatct gatgctttat ctttttctct
    25381 ggggattgtt ggcaattatg gatctgatct atgtgtttta tttttagttt tccgcactga
    25441 cataaactga caaatattta atctcccttt catttagcgt gaaaaattga atgagattat
    25501 tcctgcttct acagcactca ccagacatct ctgatgctga acccactaaa cttatgaaga
    25561 ttctttcatt attaattcaa aattattgaa ataaaaataa atatcattca atttgttatt
    25621 tttgtgttgc aattcattct ccgacacgcc attttctttc tctcgcaaat tcgtattgga
    25681 tgcacttatg tcattcacaa atacccctga acgctatggt gttatatctg cggccttcca
    25741 ttggctaagc gcaattattg tctacggcat gtttacttta ggtctgtgga tggtcacgct
    25801 cagttattac gatggctggt atcacaaagc acccgaactg cataaaagca tcggtatttt
    25861 gttaatgatg gggctggtta ttcgcgttct gtggcgtgtc atatctccac cgccgggtcc
    25921 gctgccgagt tattcgccca tgactcgtct tgccgcaaag gctggacatc tcgcattgta
    25981 cctattgctg ttcgccatcg gcatcagcgg ctatctgatc tcaactgccg atggtaaacc
    26041 gatcagcgtt tttggctggt ttgacgtccc cgcgaccctt gccgacgctg gcgcacaggc
    26101 agactttgcc ggtgccctgc atttttggct cgcgtggagc gtcgtagtac tgtccgttat
    26161 gcacggattt atggccctga agcatcattt catcgataaa gacgacactc tgaagcgcat
    26221 gctgggaaag tcgtcatctg actatggagt ataaaaaatg aaaaaaagcc tgcttggttt
    26281 aaccttcgcg tccctgatgt tctctgccgg ttcagcggtt gccgccgatt acaaaattga
    26341 caaagaaggt cagcacgcct ttgttaattt ccgcatccag caccttggct atagctggtt
    26401 atacggcacc tttgaagatt tcgacggtac ttttaccttt gacgaaaaaa atccggctgc
    26461 cgataaagtg aatgtgacaa ttaacaccac cagcgtcgat actaatcacg ccgaacgcga
    26521 taaacatctt cgcagtgcag atttcctcaa taccgcaaaa tatccacagg caacattcac
    26581 ctccaccagc gtgaagaaag acggtgacga actggatatt accggcgatc tgacgctgaa
    26641 tggcgtaacc aaacccgtca cgctggaagc gaaattaatt ggtcagggcg acgacccatg
    26701 gggtggtaaa cgtgcaggct tcgaggccga aggcaaaatt aagctcaagg acttcaatat
    26761 caagacagat ttaggtccag cttctcagga agtggatctg attatttcag tggaaggcgt
    26821 acagcagaag taagcgtgaa atgttgccgg atggcacgca tccggcaatg atatttattc
    26881 tgttggatca ggaatgccca gtgttgtatt cagacgtcca cgagacttat taaagatctt
    26941 attgccattt tcacgtcctg cccgacggcg tcgctgttct tctggcggta acgcgctttc
    27001 ttcgcagcaa atctcactac aacaaccttt gtatttttcc gcgcatactg gacactgaat
    27061 aaacagcagg tggcagccat catttttaca gttggtatgg ctgtcgcacg gcgcgccgca
    27121 ctggtggcaa tgcgcgataa tctcatccga tatacgttcg cccatccgct cgtcaaaaac
    27181 aaaatttttg ccaataaaac gcaccggcaa gccctgctcg cgcgccttac gggcgtattc
    27241 aataattccg ccctcgatat gccagacttt gttgaatccg ttatgtttca tccaagcact
    27301 ggccttttca caacgaatgc cgccggtgca gtacatgacg atttttttat ctttatgtgc
    27361 ctgcatcatc tcgactgctt ttggcagctg ctcacggaag gtatctgccg gaatttcgag
    27421 cgcgttttca aagtgcccca cttcatactc atagtggtta c
//
LOCUS       DADMJE010000041        27203 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.042, whole genome shotgun sequence.
ACCESSION   DADMJE010000041 DADMJE010000000
VERSION     DADMJE010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 27203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27203
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.042"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(37..1335)
                     /gene="eno"
                     /locus_tag="JN001_001576"
     CDS             complement(37..1335)
                     /gene="eno"
                     /locus_tag="JN001_001576"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HAY9052843.1"
                     /translation="MSKIVKIIGREIIDSRGNPTVEAEVHLEGGFVGMAAAPSGASTG
                     SREALELRDGDKSRFLGKGVTKAVAAVNGPIAQALIGKDAKDQAGIDKIMIDLDGTEN
                     KSKFGANAILAVSLANAKAAAAAKGMPLYEHIAELNGTPGKYSMPVPMMNIINGGEHA
                     DNNVDIQEFMIQPVGAKTVKEAIRMGSEVFHHLAKVLKAKGMNTAVGDEGGYAPNLGS
                     NAEALAVIAEAVKAAGYELGKDITLAMDCAASEFYKDGKYVLAGEGNKAFTSEEFTHF
                     LEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKG
                     IANSILIKFNQIGSLTETLAAIKMAKDAGYTAVISHRSGETEDATIADLAVGTAAGQI
                     KTGSMSRSDRVAKYNQLIRIEEALGEKAPYNGRKEIKGQA"
     gene            complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JN001_001577"
     CDS             complement(1423..3060)
                     /gene="pyrG"
                     /locus_tag="JN001_001577"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase (glutamine hydrolyzing)"
                     /protein_id="HAY9052844.1"
                     /translation="MTTNYIFVTGGVVSSLGKGIAAASLAAILEARGLNVTIMKLDPY
                     INVDPGTMSPIQHGEVFVTEDGAETDLDLGHYERFIRTKMSRRNNFTTGRIYSDVLRK
                     ERRGDYLGATVQVIPHITNAIKERVLEGGEGHDVVLVEIGGTVGDIESLPFLEAIRQM
                     AVEIGREHTLFMHLTLVPYMAASGEVKTKPTQHSVKELLSIGIQPDILICRSDRAVPA
                     NERAKIALFCNVPEKAVISLKDVDSIYKIPGLLKSQGLDDYICKRFSLNCPEANLSEW
                     EQVIFEEANPVSEVTIGMVGKYIELPDAYKSVIEALKHGGLKNRVSVNIKLIDSQDVE
                     TRGVEILKGLDAILVPGGFGYRGVEGMITTARFARENNIPYLGICLGMQVALIDYARH
                     VANMENANSTEFVPDCKYPVVALITEWRDENGNVEVRSEKSDLGGTMRLGAQQCQLVD
                     DSLVRQLYNAPTIVERHRHRYEVNNMLLKQIEDAGLRVAGRSGDDQLVEIIEVPNHPW
                     FVACQFHPEFTSTPRDGHPLFAGFVKAASEFQKRQAK"
     gene            complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JN001_001578"
     CDS             complement(3288..4079)
                     /gene="mazG"
                     /locus_tag="JN001_001578"
                     /EC_number="3.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase"
                     /protein_id="HAY9052845.1"
                     /translation="MNQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVL
                     DAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRHPHVFAD
                     SSAENSSEVLARWEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWT
                     TLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQK
                     ANEKFERRFREVERIVAARGLEMTGVDLETMEEVWQQVKRQEIDL"
     gene            complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JN001_001579"
     CDS             complement(4150..4485)
                     /gene="mazF"
                     /locus_tag="JN001_001579"
                     /EC_number="3.1.27.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endoribonuclease MazF"
                     /protein_id="HAY9052846.1"
                     /translation="MVSRYVPDMGDLIWVDFDPTKGSEQAGHRPAVVLSPFMYNNKTG
                     MCLCVPCTTQSKGYPFEVVLSGQERDGVALADQVKRIAWRARGATKKGTVAPEELQLI
                     KAKINVLIG"
     gene            complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JN001_001580"
     CDS             complement(4485..4733)
                     /gene="mazE"
                     /locus_tag="JN001_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin MazE"
                     /protein_id="HAY9052847.1"
                     /translation="MIHSSVKRWGNSPAVRIPATLMQALNLNIDDEVKIDLVDGKLII
                     EPVRKEPVFTLAELVNDITPENLHENIDWGEPKDKEVW"
     gene            complement(4811..7045)
                     /locus_tag="JN001_001581"
     CDS             complement(4811..7045)
                     /locus_tag="JN001_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase"
                     /protein_id="HAY9052848.1"
                     /translation="MVAVRSAHINKAGEFDPEKWIASLGITSQKSCECLAETWAYCLQ
                     QTQGHPDASLLLWRGVEMVEILSTLSMDIDTLRAALLFPLADANVVSEDVLRESVGKS
                     VVNLIHGVRDMAAIRQLKATHTDSVSSEQVDNVRRMLLAMVDDFRCVVIKLAERIAHL
                     REVKDAPEDERVLAAKECTNIYAPLANRLGIGQLKWELEDYCFRYLHPTEYKRIAKLL
                     HERRLDREHYIEEFVGHLRAEMKAEGVKAEVYGRPKHIYSIWRKMQKKNLAFDELFDV
                     RAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANPKPNGYQSIHTVVLGPGGKTV
                     EIQIRTKQMHEDAELGVAAHWKYKEGAAAGGARSGHEDRIAWLRKLIAWQEEMADSGE
                     MLDEVRSQVFDDRVYVFTPKGDVVDLPAGSTPLDFAYHIHSDVGHRCIGAKIGGRIVP
                     FTYQLQMGDQIEIITQKQPNPSRDWLNPNLGYVTTSRGRSKIHAWFRKQDRDKNILAG
                     RQILDDELEHLGISLKEAEKHLLPRYNFNDVDELLAAIGGGDIRLNQMVNFLQSQFNK
                     PSAEEQDAAALKQLQQKSYTPQNRSKDNGRVVVEGVGNLMHHIARCCQPIPGDEIVGF
                     ITQGRGISVHRADCEQLAELRSHAPERIVDAVWGESYSAGYSLVVRVVANDRSGLLRD
                     ITTILANEKVNVLGVASRSDTKQQLATIDMTIEIYNLQVLGRVLGKLNQVPDVIDARR
                     LHGS"
     gene            complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JN001_001582"
     CDS             complement(7093..8394)
                     /gene="rlmD"
                     /locus_tag="JN001_001582"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HAY9052849.1"
                     /translation="MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGKTLFIPGL
                     LPQENAEVTVTEDKKQYARAKVVRRLSDSPERETPRCPHFGVCGGCQQQHASVDLQQR
                     SKSAALARLMKHEVSEVIADVPWGYRRRARLSLNYLPKTQQLQMGFRKAGSSDIVDVK
                     QCPILVPQLEALLPKVRACLGSLQAMRHLGHVELVQATSGTLMILRHTAPLSSADREK
                     LERFSHSEGLDLYLAPDSEILETVSGEMPWYDSNGLRLTFSPRDFIQVNAGVNQKMVA
                     SALEWLDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQNARLNGLQ
                     NVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGAAGVMQQIIKLEPIRIVYVSCNPA
                     TLARDSEALLKAGYTIARLAMLDMFPHTGHLESMVLFSRVK"
     gene            8451..11207
                     /gene="barA"
                     /locus_tag="JN001_001583"
     CDS             8451..11207
                     /gene="barA"
                     /locus_tag="JN001_001583"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase BarA"
                     /protein_id="HAY9052850.1"
                     /translation="MTNYSLRARMMILILAPTVLIGLLLSIFFVVHRYNDLQRQLEDA
                     GASIIEPLAVSTEYGMSLQNRESIGQLISVLHRRHSDIVRAISVYDENNRLFVTSNFH
                     LDPSSMQLGSNVPFPRQLTVTRDGDIMILRTPIISESYSPDESPSSDAKNSQNMLGYI
                     ALELDLKSVRLQQYKEIFISSVMMLFCIGIALIFGWRLMRDVTGPIRNMVNTVDRIRR
                     GQLDSRVEGFMLGELDMLKNGINSMAMSLAAYHEEMQHNIDQATSDLRETLEQMEIQN
                     VELDLAKKRAQEAARIKSEFLANMSHELRTPLNGVIGFTRLTLKTELTPTQRDHLNTI
                     ERSANNLLAIINDVLDFSKLEAGKLILESIPFPLRSTLDEVVTLLAHSSHDKGLELTL
                     NIKSDVPDNVIGDPLRLQQIITNLVGNAIKFTENGNIDILVEKRALSNTKVQIEVQIR
                     DTGIGIPERDQSRLFQAFRQADASISRRHGGTGLGLVITQKLVNEMGGDISFHSQPNR
                     GSTFWFHINLDLNPNIIIEGPSTQCLAGKRLAYVEPNSAAAQCTLDILSETPLEVVYS
                     PTFSALPPAHYDMMLLGIAVTFREPLTMQHERLAKAVSMTDFLMLALPCHAQVNAEKL
                     KQDGIGACLLKPLTPTRLLPALTEFCHHKQNTLLPVTDESKLAMTVMAVDDNPANLKL
                     IGALLEDMVQHVELCDSGHQAVERAKQMPFDLILMDIQMPDMDGIRACELIHQLPHQQ
                     QTPVIAVTAHAMAGQKEKLLGAGMSDYLAKPIEEERLHNLLLRYKPGSGISSRVVTPE
                     VNEIVVNPNATLDWQLALRQAAGKTDLARDMLQMLLDFLPEVRNKVEEQLVGENPEGL
                     VDLIHKLHGSCGYSGVPRMKNLCQLIEQQLRSGTKEEDLEPELLELLDEMDNVAREAS
                     KILG"
     gene            complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JN001_001584"
     CDS             complement(11439..12779)
                     /gene="gudD"
                     /locus_tag="JN001_001584"
                     /EC_number="4.2.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY9052851.1"
                     /translation="MSSQFTTPVVTEMQVIPVAGHDSMLMNLSGAHAPFFTRNIMIIK
                     DNSGHTGVGEIPGGEKIRKTLEDAIPLVVGKTLGEYKNVLTLVRNTFADRDAGGRGLQ
                     TFDLRTTIHVVTGIEAAMLDLLGQHLGVNVASLLGDGQQRSEVEMLGYLFFVGDRKAT
                     PLPYQSQPDDSCDWYRLRHEEAMTPDAVVRLAEAAYEKYGFNDFKLKGGVLAGEEEAE
                     SIVALAQRFPQARITLDPNGAWSLNEAIKIGKYLKGSLAYAEDPCGAEQGFSGREVMA
                     EFRRATGLPTATNMIATDWRQMGHTLSLQSVDIPLADPHFWTMQGSVRVAQMCHEFGL
                     TWGSHSNNHFDISLAMFTHVAAAAPGKITAIDTHWIWQEGNQRLTKEPFEIKGGLVQV
                     PEKPGLGVEIDMDQVMKAHELYQKHGLCARDNAMGMQYLIPGWTFDNKRPCMVR"
     gene            complement(12800..14140)
                     /locus_tag="JN001_001585"
     CDS             complement(12800..14140)
                     /locus_tag="JN001_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucarate dehydratase"
                     /protein_id="HAY9052852.1"
                     /translation="MTTQSSPVITDMKVIPVAGHDSMLLNIGGAHNAYFTRNIVVLTD
                     NAGHTGIGEAPGGEVIYQTLVDAIPMVLGQEVARLNKVVQQVHKGNQAADFDTFGKGA
                     WTFELHVNAVAALEAALLDLLGKALNVPVCELLGPGKQRETITVLGYLFYIGDRTKTD
                     LPYLENTPGNHEWYQLRHQKAMNSEAVVRLAEASQDRYGFKDFKLKGGVLPGEQEIDT
                     VRALKKRFPDARITVDPNGAWLLDEAISLCKGLNDVLTYAEDPCGAEQGFSGREVMAE
                     FRRATGLPVATNMIATNWREMGHAVMLNAVDIPLADPHFWTLSGAVRVAQLCDDWGLT
                     WGCHSNNHFDISLAMFTHVGAAAPGNPTAIDTHWIWQEGDCRLTKNPLEIKNGKIAVP
                     DAPGLGVELDWEQVQKAHEAYKRLPGGARNDAGPMQYLIPGWTFDRKRPVFGRH"
     gene            complement(14142..15512)
                     /locus_tag="JN001_001586"
     CDS             complement(14142..15512)
                     /locus_tag="JN001_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052853.1"
                     /translation="MFRSATTSSLSQAASSVEKRTNARYWIVVMLFIVTSFNYGDRAT
                     LSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWS
                     MFTLLQGFVDIFSGFGIIVALFTLRFLVGLAEAPSFPGNSRIVAAWFPAQERGTAVSI
                     FNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIVISFIWLKVIHEPNQHPGVNQ
                     KELEYIAAGGALINMDQQNTKVKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYF
                     FITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKT
                     PIVMGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSG
                     GLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALIAVLSYLVLVGDIKRIEL
                     KPVAGQ"
     gene            complement(15929..16378)
                     /locus_tag="JN001_001587"
     CDS             complement(15929..16378)
                     /locus_tag="JN001_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HAY9052854.1"
                     /translation="MAEIGIFVGTMYGNSLLVAEEAEAILTAQGHKATVFEDPELSDW
                     LPYQDKYVLVVTSTTGQGDLPDSIVPLFQGIKDSLGFQPNLRYGVIALGDSSYVNFCN
                     GGKQFDALLQEQSAQRVGEMLLIDASENPEPETESNPWVEQWGTLLS"
     gene            complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JN001_001588"
     CDS             complement(16396..17178)
                     /gene="truC"
                     /locus_tag="JN001_001588"
                     /EC_number="5.4.99.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(65) synthase TruC"
                     /protein_id="HAY9052855.1"
                     /translation="MLEILYQDEWLVSVNKPSGWLVHRSWLDRDEKVVVMQTVRNQIG
                     QHVFTAHRLDRPTSGVLLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDY
                     PLVEELDKIADKFAREDKGPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGR
                     KHQLRRHLAHLRHPIIGDSKHGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLT
                     IHAGLDDTWMQALSQFGWRGLLPENERVEFSAPSGQDGEISS"
     gene            complement(17178..17507)
                     /locus_tag="JN001_001589"
     CDS             complement(17178..17507)
                     /locus_tag="JN001_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqcC family protein"
                     /protein_id="HAY9052856.1"
                     /translation="MTTHDRVRLQLQALEALLREHQHWRNDEPQPHQFNSTQPFFMDT
                     MEPLEWLQWVLIPRMHDLLNNNQPLPGAFAVAPYYEMALATDHPQHALILAELEKLDA
                     LFADDAS"
     gene            complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JN001_001590"
     CDS             complement(18129..18674)
                     /gene="syd"
                     /locus_tag="JN001_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SecY-interacting protein"
                     /protein_id="HAY9052857.1"
                     /translation="MDDLTAQALKDFTARYCDAWHEEHKSWPLSEELYGVPSPCIIST
                     TEDAVYWQPQPFTGEQNVNAVERAFDIVIQPTIHTFYTTQFAGDMHAQFGDIKLTLLQ
                     TWSEDDFRRVQENLIGHLVTQKRLKLPPTLFIATLEEELEVISVCNLSGEVCKETLGT
                     RKRTHLASNLAEFLNQLKPLL"
     gene            18742..19590
                     /gene="queF"
                     /locus_tag="JN001_001591"
     CDS             18742..19590
                     /gene="queF"
                     /locus_tag="JN001_001591"
                     /EC_number="1.7.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 7-cyano-7-deazaguanine reductase
                     QueF"
                     /protein_id="HAY9052858.1"
                     /translation="MSSYANHQALAGLTLGKSTDYRDTYDASLLQGVPRSLNRDPLGL
                     KADNLPFHGTDIWTLYELSWLNAKGLPQVAVGHVELDYTSVNLIESKSFKLYLNSFNQ
                     TRFNNWDEVRQTLERDLSTCAQGKISVALYRLDELEGQPIGHFNGTCIDDQDITIDNY
                     EFTTDYLENATCGEKVVEETLVSHLLKSNCLITHQPDWGSIQIQYRGRQIDREKLLRY
                     LVSFRHHNEFHEQCVERIFNDLLRFCQPEKLSVYARYTRRGGLDINPWRSNSDFVPST
                     TRLVRQ"
     gene            19702..21066
                     /gene="ppnN"
                     /locus_tag="JN001_001592"
     CDS             19702..21066
                     /gene="ppnN"
                     /locus_tag="JN001_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide 5'-monophosphate nucleosidase"
                     /protein_id="HAY9052859.1"
                     /translation="MITHISPLGSMDMLSQLEVDMLKRTASSDLYQLFRNCSLAVLNS
                     GSLTDNSKELLSRFENFDINVLRRERGVKLELINPPEEAFVDGRIIRALQANLFAVLR
                     DILFVYGQIHNTVRFPNLNLDNSVHITNLVFSILRNARALHVGEAPNMVVCWGGHSIN
                     ENEYLYARRVGNQLGLRELNICTGCGPGAMEAPMKGAAVGHAQQRYKDSRFIGMTEPS
                     IIAAEPPNPLVNELIIMPDIEKRLEAFVRIAHGIIIFPGGVGTAEELLYLLGILMNPA
                     NKDQVLPLILTGPKESADYFRVLDEFVVHTLGENARRHYRIIIDDAAEVARQMKKSMP
                     LVKENRRDTGDAYSFNWSMRIAPDLQMPFEPSHENMANLKLYPDQPVEVLAADLRRAF
                     SGIVAGNVKEVGIRAIEEFGPYKINGDKEIMRRMDDLLQGFVAQHRMKLPGSAYIPCY
                     EICT"
     gene            21623..22912
                     /locus_tag="JN001_001593"
     CDS             21623..22912
                     /locus_tag="JN001_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
                     /protein_id="HAY9052860.1"
                     /translation="METTQTSTIASKDSRSAWRKTDTMWMLGLYGTAIGAGVLFLPIN
                     AGVGGMIPLIIMAILAFPMTFFAHRGLTRFVLSGKNPGEDITEVVEEHFGIGAGKLIT
                     LLYFFAIYPILLVYSVAITNTVESFMSHQLGMTPPPRAILSLILIVGMMTIVRFGEQM
                     IVKAMSILVFPFVGVLMLLALYLIPQWNGAALETLSLDTASATGNGLWMTLWLAIPVM
                     VFSFNHSPIISSFAVAKREEYGDMAEQKCSKILAFAHIMMVLTVMFFVFSCVLSLTPA
                     DLAAAKEQNISILSYLANHFNAPVIAWMAPIIAIIAITKSFLGHYLGAREGFNGMVIK
                     SLRGKGKSIEINKLNRITALFMLVTTWIVATLNPSILGMIETLGGPIIAMILFLMPMY
                     AIQKVPAMRKYSGHISNVFVVVMGLIAISAIFYSLFS"
     gene            22970..24337
                     /gene="sdaB"
                     /locus_tag="JN001_001594"
     CDS             22970..24337
                     /gene="sdaB"
                     /locus_tag="JN001_001594"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase II"
                     /protein_id="HAY9052861.1"
                     /translation="MISVFDIFKIGIGPSSSHTVGPMKAGKQFTDDLIARNLLKDVTR
                     VVVDVYGSLSLTGKGHHTDIAIIMGLAGNLPDTVDIDSIPGFIQDVNTHGRLMLANGQ
                     HEVEFPVDQCMNFHADNLSLHENGMRITALAGDKVVYSQTYYSIGGGFIVDEEHFGQQ
                     DSAPVEVPYPYSSAADLQKHCQETGLSLSGLMMKNELALHSKEELEQHLANVWEVMRG
                     GIERGISTEGVLPGKLRVPRRAAALRRMLVSQDKTTTDPMAVVDWINMFALAVNEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFIREVNANSLARYLLVASAIGSLYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGASPAQVCIAAEIAMEHNLGLTCDPVAGQVQVPC
                     IERNAIAAVKAVNAARMALRRTSEPRVCLDKVIETMYETGKDMNAKYRETSRGGLAMK
                     IVACD"
     gene            24359..25204
                     /gene="xni"
                     /locus_tag="JN001_001595"
     CDS             24359..25204
                     /gene="xni"
                     /locus_tag="JN001_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311685.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flap endonuclease Xni"
                     /protein_id="HAY9052862.1"
                     /translation="MRGLFPISHPAVACSGIECYPYRLIFKGVIVAVHLLIVDALNLI
                     RRIHAVQGSPCVETCQHALDQLIMHSQPTHAVAVFDDENRSSGWRHQRLPDYKAGRPP
                     MPEELHDEMPALRAAFEQRGVPCWSTSGNEADDLAATLAVKVTQAGHQATIVSTDKGY
                     CQLLSPTLRIRDYFQKRWLDAPFIDKEFGVQPQQLPDYWGLAGISSSKVPGVAGIGPK
                     SATQLLVEFQSLEGIYENLDAVAEKWRKKLETHKEMAFLCRDIARLQTDLHIDGNLQQ
                     LRLVR"
     gene            complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JN001_001596"
                     /pseudo
     CDS             complement(25309..26446)
                     /gene="fucO"
                     /locus_tag="JN001_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417279.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lactaldehyde reductase"
     gene            complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JN001_001597"
     CDS             complement(26474..27121)
                     /gene="fucA"
                     /locus_tag="JN001_001597"
                     /EC_number="4.1.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculose-phosphate aldolase"
                     /protein_id="HAY9052863.1"
                     /translation="MERNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTG
                     IPYEKLTESHIAFIDGNGKHEEGKLPSSEWRFHMAAYQSRPDANAVVHNHAVHCTAVS
                     ILNRPIPAIHYMIAAAGGNSIPCASYATFGTRELSEHVALALKNRKATLLQHHGLIAC
                     EVNLEKALWLAHEVEVLAQLYLTTLAITDPVPVLSDEEIAVVLEKFKTYGLRIEE"
BASE COUNT         6581 a         7295 c         6553 g         6774 t
ORIGIN      
        1 cggaggctgg catttttaaa tcagataaag tcagtcttat gcctggcctt tgatctcttt
       61 acgaccgttg tacggtgctt tttcgcccag agcttcttcg atacgaatca gctggttgta
      121 tttagcaaca cggtcagaac ggctcataga accagttttg atctggcctg cagcagtacc
      181 aacagccagg tcagcgatgg tagcgtcttc agtttcgcca gaacggtgag agataactgc
      241 agtgtagcca gcatctttcg ccatcttgat tgcagccaga gtttcggtca gagaaccgat
      301 ctggttgaat ttgatcagga tggagttagc gatacctttt tcgatacctt ctttcaggat
      361 cttggtgttg gttacgaaca ggtcgtcacc aaccagctgg attttgtcgc ccagaacttt
      421 ggtctggtat gcgaaaccgt cccagtcaga ttcgtccaga ccgtcttcga tagaaacgat
      481 cgggtactgt ttggtcagtt cttccaggaa gtgagtgaat tcttcagagg tgaacgcttt
      541 gttgccttcg ccagccagaa cgtatttacc atctttgtag aattcagaag ctgcgcagtc
      601 catcgccaga gtgatgtctt tgcccagttc ataaccagca gctttaacag cttcagcgat
      661 aacagccaga gcttcagcgt tggaacccag gttcggcgca tagccacctt cgtcaccaac
      721 agcagtattc atgcctttcg ctttcagaac ttttgccagg tgatggaaaa cttcagaacc
      781 catgcggatg gcttctttca cagttttcgc gccaaccggc tgaatcatga attcctggat
      841 atcaacgttg ttgtcagcgt gctcaccacc gttgatgatg ttcatcatcg gaaccggcat
      901 agagtatttg cccggagtac cgttcagttc agcgatgtgc tcgtacagcg gcataccttt
      961 agcagctgca gcagctttgg cgttagccag agatacagcc aggattgcgt tcgcgccgaa
     1021 tttggatttg ttttcggtgc cgtccaggtc gatcatgatc ttgtcaatgc cagcctgatc
     1081 tttagcatct ttgccaatca gcgcctgagc gatcgggccg tttaccgcag caacagcttt
     1141 ggttacgcct ttacccagga aacgggattt gtcgccatcg cgcagttcca gagcttcacg
     1201 ggaaccagta gaagcacctg acggagcagc tgccataccg acgaaaccac cctccagatg
     1261 tacttcggct tcaacagtcg ggttaccacg ggagtcgatg atttcacgac cgatgatttt
     1321 tacgattttg gacattaggt tttcctcaag tcactagtta aactgaaact ccagacaaac
     1381 aacacgtacc cagggtacgc gttgccgttc taactttttt acttacttcg cctgacgttt
     1441 ctggaactcg ctggcggctt tcacaaagcc tgcaaacagc gggtgaccat cacgtggagt
     1501 agaagtaaac tccggatgga actggcaagc cacgaaccac gggtgattcg gaacttcgat
     1561 gatctcgacc aactgatcat ccccggaacg gcccgcaacg cgcagacctg catcttcaat
     1621 ctgtttcaac agcatgttgt tgacttcgta acggtgacga tgacgctcaa caattgtcgg
     1681 cgcattgtac agctggcgaa ccaggctatc gtcaaccaac tggcactgct gtgcgccgag
     1741 acgcatggta ccgccgagat cgctcttctc gctacgaact tcaacgttgc cgttttcatc
     1801 gcgccactcg gtaatcagcg ccacaaccgg gtacttacag tctggcacaa attccgtaga
     1861 gttggcgttc tccatgttgg caacatggcg agcgtaatca attaacgcca cctgcatacc
     1921 caggcaaatg cccagataag gaatattgtt ctcacgcgca aaacgcgcgg tcgtaatcat
     1981 gccttctacg ccacgatagc cgaaaccgcc aggtacgagg attgcgtcca gacctttaag
     2041 gatttcaacg ccgcgcgttt caacatcttg tgaatcgatc agtttgatgt tgacgctgac
     2101 acgattcttc agcccaccgt gtttcagtgc ttcgatcact gatttataag catccggcag
     2161 ttcaatgtac ttgccgacca taccgatggt gacttcactt accgggttcg cttcttcgaa
     2221 gataacctgt tcccattcgg acagattcgc ttccgggcag tttaagctga atcgtttaca
     2281 aatataatcg tccagcccct gagatttcaa caggcccgga attttataga tggaatcgac
     2341 gtctttcaga gaaataaccg ctttttccgg aacattacag aacaatgcaa tcttcgcacg
     2401 ttcgttcgcc ggaacagcgc gatctgaacg acaaatcagg atgtcaggct ggataccgat
     2461 ggagagcagc tcttttacag agtgctgagt cggtttggtt ttgacttcac cagacgctgc
     2521 catgtacggc accagcgtca ggtgcataaa cagagtgtgc tcacggccaa tttcaacagc
     2581 catctggcga atcgcttcga ggaacggcaa ggattcgata tcacctactg taccgccgat
     2641 ttctaccagt actacgtcat gaccttcgcc accttccagc acgcgctctt tgattgcgtt
     2701 agtgatgtgc ggaataacct gcacggttgc gccgaggtag tcaccgcggc gttctttacg
     2761 cagaacgtca gagtagatac gacccgtggt gaagttgttg cggcggctca ttttggtacg
     2821 aatgaaacgc tcgtagtgcc ccaggtccag gtcggtttca gcgccgtctt cagtaacgaa
     2881 cacttccccg tgttggattg ggctcatagt acctggatcg acgttgatgt acggatccag
     2941 tttcatgatg gtcacattga ggccacgggc ttcaagaatg gctgcgaggg aggctgcggc
     3001 aatgccttta cccagagagg atacgacccc gccggtcaca aaaatatagt tcgttgtcat
     3061 gctgaacctg agaagttagg ttgaaaagac gatggaataa ccaggacggg aaagcagtat
     3121 acccgaacat gacctgtgcc acaaactttc attatccctc ctcttcgcca gcgcactatt
     3181 gaaatcagga gtgagaaaat agcccctttg gggtaaatgt ttttgacgca aatcaagcgc
     3241 ttgtcattta aaaaatgaca caaatggcac ttgaccgcgt aattccctta gagatcaatt
     3301 tcctgccgtt ttacctgttg ccagacttct tccattgttt cgaggtcaac acctgtcatt
     3361 tccagtccac gcgcggcaac aatacgctcc acttcgcgaa aacgacgctc gaatttttcg
     3421 ttcgcttttt gcaatgcgat ttctgctttc gtccctaaat ggcgagccag attaaccgtg
     3481 gcaaacagca ggtcccccat ttcctcctcc agtttagcct ggtcgacaac agcctgccgc
     3541 gcttcgtaca tcacctcgtc gatctcttcg tagactttat caaccaccgg gccaagcgtc
     3601 gtccagtcga agccaacgtt ggcgcaacgt ttctggattt tttgcgcccg cattaaagcc
     3661 ggtaaactac gaggaatatc gtccagcgcc gaatgctgcg ctttctgcgc gcgctcttcg
     3721 gttttgattt gctcccaacg ggcaagcact tcactactgt tttcggcaga actatcagca
     3781 aaaacatgcg gatggcgacg ctctaattta tcgctaatag cagcgcaaat atcattaaag
     3841 tcaaagcgcc cttcttcctg agccatttgc gcgtaaaaca ccacctggaa tagcagatcg
     3901 cccagttcac cgcgaagatc gtcaaaatct tcacgggcga tggcgtccag cacttcgtag
     3961 gtttcttcaa gggtgtaagg cgcaatggtg gcaaatgtct gctctttatc ccacgggcag
     4021 ccgttttccg gatcgcgcag gcgctgcata atagtgagca aacgatcgat ttgattcatt
     4081 gaattgtcct gaaaattgcg ggtctgtcag gtggaaacct gtgaccagaa tagaagtgag
     4141 ttagtaacac tacccaatca gtacgttaat tttggcttta atgagttgta attcctctgg
     4201 ggcaactgtt cctttcttcg ttgctcctct tgcccgccag gcgattcttt ttacctgatc
     4261 agctaacgct acgccatcac gttcctgacc ggataaaaca acttcgaacg gatatccttt
     4321 tgattgcgtt gtacaaggaa cacacagaca catacctgtt ttgttgttgt acatgaaagg
     4381 actcaggaca acagctggac gatgtccagc ttgctcgcta ccttttgtcg ggtcaaaatc
     4441 aacccaaatc agatcgccca tatcgggtac gtatcggctt accattacca gacttcctta
     4501 tctttcggct ctccccagtc gatattctcg tggaggtttt ccggcgtgat gtcgttgacc
     4561 agttcagcaa gcgtaaatac gggctcttta cgcactggct caataattaa tttgccatcc
     4621 accaggtcaa tcttcacttc atcatcaata ttcagattga gcgcctgcat taacgtagcc
     4681 gggatccgca ccgccggtga atttccccaa cgctttacgc tactgtggat catcaccctt
     4741 tcctcaaacc gctatcatat gtagatacag tatatatcaa tctacattgt agatacgagc
     4801 aaatttctgc ctaactcccg tgcaaccgac gcgcgtcgat aacatccggc acctggttga
     4861 gtttacccag cacgcggccc agcacctgca ggttgtaaat ctcaatggtc atgtcgatgg
     4921 tcgccagttg ctgtttggtg tcgctacggc tggcaacgcc aagtacgttc accttctcgt
     4981 tggcgagaat ggtcgtgata tcacgtaaca acccactacg atcattagcc accacgcgga
     5041 ccaccagcga atatccggcg gagtagctct caccccatac cgcgtcaaca atgcgttctg
     5101 gcgcatgaga gcgcagttcc gccagttgtt cgcaatcggc gcggtgtact gaaataccgc
     5161 gcccctgggt aatgaagccg acaatctcat ctccaggaat cggctggcag cagcgcgcga
     5221 tgtggtgcat caggttgcca acaccttcga ctaccacgcg accgttatct ttactgcggt
     5281 tttgcggcgt gtagcttttt tgctgaagtt gcttcagcgc ggcggcgtcc tgctcttcgg
     5341 cactcggctt attaaattgc gattgcagga agttcaccat ctgattgaga cggatatccc
     5401 cgccaccaat cgccgccagc aactcgtcga catcattaaa gttgtaacgc ggcagcagat
     5461 gtttttctgc ttctttcagg ctgatcccca gatgttccag ctcgtcgtca aggatttgcc
     5521 gcccagccag aatgtttttg tcacggtcct gtttacggaa ccaggcgtga attttcgaac
     5581 gcccacggct ggttgtgacg taaccgaggt ttgggtttaa ccagtcacgg ctggggttcg
     5641 gctgtttctg ggtgataatt tcaatctggt cgcccatctg cagctggtag gtgaacggca
     5701 caatgcgccc gccaattttt gccccgatgc agcggtgtcc gacatcactg tggatgtggt
     5761 aagcgaagtc cagcggcgtt gatcccgcag gcaaatcaac gacatcacct ttcggcgtaa
     5821 agacatacac ccggtcgtca aagacctggc tgcgtacttc gtcgagcatt tcgccggaat
     5881 cagccatctc ttcctgccac gcaatcagtt tacgcagcca ggcaatccgg tcttcatgtc
     5941 ccgaacgtgc gccgccagct gccgcgccct ctttatattt ccagtgcgca gcaacaccca
     6001 actctgcatc ttcatgcatc tgtttggtgc ggatttggat ctcaacggtt ttgccacctg
     6061 gccccagaac cacggtatga atagactgat aaccgtttgg tttcgggtta gcgacataat
     6121 cgtcaaactc atccggcagg tggcgatagt gagtgtgcac tatccccagt gcggcataac
     6181 aatcctgtaa acgctcggcg acaatacgta ccgcacgcac atcaaacagc tcatcgaagg
     6241 cgaggttctt tttctgcatt ttgcgccaga tgctgtagat gtgtttcgga cggccataca
     6301 cttcagcttt aacgccttca gctttcatct cagcgcgcag atgaccgaca aactcttcga
     6361 tatagtgttc gcggtcgaga cggcgttcat gcagcagttt tgcgatgcgt ttgtattcgg
     6421 tcgggtgcag ataacggaag cagtaatctt ccagctccca tttcagttgc ccaatcccaa
     6481 gacggttcgc caacggcgcg tagatattgg tgcactcttt tgccgccagt acgcgttcat
     6541 cttccggcgc atcttttact tcgcgcagat gagcaatacg ctccgccagt ttgatgacca
     6601 cgcagcgaaa atcatcgacc atcgccaata acatccggcg aacgttatcg acctgttcgg
     6661 aggaaacaga atcagtgtgc gtcgctttca gctggcggat cgccgccata tcacgcacgc
     6721 cgtgaataag gttaacgaca gacttaccga cgctctcacg cagcacatct tcgctgacta
     6781 cgttggcatc ggccagaggg aacagcagcg ccgcccgcag cgtgtcaatg tccatactta
     6841 atgtcgagag gatctccacc atctcaacac cacgccacaa taacagactg gcatccggat
     6901 gcccctgcgt ctgctgcaga caatacgccc aggtttcggc taagcactca cacgacttct
     6961 ggctggtaat acccagactt gcgatccatt tttccggatc aaattcacca gccttattga
     7021 tatgtgcact tcttaccgca accattgtcc tctcctttag ggaccagacc tgccgaaatc
     7081 ggcaaatcgt aactatttaa cgcgcgagaa aagtaccatc gattccagat gtcccgtgtg
     7141 tgggaacata tccagcatcg ccagtcgcgc aatggtatat cctgctttta ataacgcttc
     7201 gctatcccga gccagcgttg cagggttaca ggatacataa actatacgaa taggttccag
     7261 ttttataatt tgctgcataa cacctgcggc acctgctcgc gccgggtcca gcaacacttt
     7321 atcgaagccg tttttcgccc acggctgctt tgtgacatct tcttcaagat tttcgtgata
     7381 aaacgtcaca ttctgtaagc cattaagacg cgcattctgc tggccttttt ccaccagcgc
     7441 cggaacacct tctacaccga ccacactggc agcttgtgtc gccaatggca gtgtaaagtt
     7501 gcccataccg cagaacagat ccagtacgcg atcttcaggt tgcacatcca gccattccaa
     7561 cgcactcgct accatttttt ggttcacacc cgcattgacc tgaataaaat cgcgcgggct
     7621 aaaagttaag cgcaacccgt tagagtcata ccagggcatc tcaccagaga cggtttcgag
     7681 tatctcacta tcgggggcga gatacagatc caggccttca gaatgcgaaa agcgttccag
     7741 tttttcgcga tctgccgaac ttagcggtgc ggtatggcgc aaaatcatca gcgtgccgct
     7801 ggttgcctgt accagttcaa catgaccaag atggcgcatt gcttgtaagc tgcccaggca
     7861 tgccctgact ttgggcagca atgcttcaag ttggggcact aaaatgggac attgtttaac
     7921 gtcgacaatg tcactggagc ccgctttgcg aaaccccatc tgaagttgct gtgttttcgg
     7981 taagtagttc agacttaaac gcgcgcgacg gcgatagccc cagggaacat cggcgatcac
     8041 ttcagagact tcgtgtttca ttaatcgggc gagtgccgca cttttgcttc gctgctgtaa
     8101 atccacgctg gcgtgttgtt gctgacagcc gccgcatacg ccaaaatgag gacagcgtgg
     8161 cgtttcgcgt tccgggctat cgcttaaccg gcgtacgact ttagcgcggg catactgttt
     8221 tttatcttca gtaacagtaa cttccgcgtt ttcctgcggc aataatccgg ggataaatag
     8281 cgttttgccg ttatgtcgcg ccacgccctg accaaaagag tcgaggtcgt tgactgaaac
     8341 ggttatgatc tgacgcgtcg tcgtgcgtcg ttttgcagag tagaattgcg ccattggcga
     8401 gactttctca atttaacagt gtgaccttaa ttgtcacata acggaactcc atgaccaact
     8461 acagcctgcg cgcacgcatg atgattctga tcctggcacc gaccgtcctt attggtttat
     8521 tgctgagtat atttttcgtc gtgcatcgct ataacgactt gcagcgtcaa ctggaagatg
     8581 caggtgccag cattattgag ccgcttgcag tttctactga atatggcatg agcctgcaaa
     8641 atcgcgaatc tatcggtcag ttaataagcg tactgcatcg tcgccattcc gatattgttc
     8701 gcgcgatttc ggtttatgat gaaaataacc gactctttgt cacctccaat tttcatcttg
     8761 atccctcatc aatgcagctc ggcagcaacg tgccgtttcc tcgccagctc actgtcactc
     8821 gtgacggcga tattatgatc ctccgcacgc cgattatttc tgagagttac tcccccgacg
     8881 aatcgcccag tagcgatgcc aaaaatagtc aaaatatgtt gggatatatt gcgcttgagc
     8941 tggatcttaa atcggttcgc ttgcagcaat ataaagagat ctttatttcc agcgtgatga
     9001 tgctgttttg tatcggtatt gcgcttattt ttggctggcg cttaatgcgc gatgtaaccg
     9061 gtccgattcg caacatggtg aataccgtcg accgcatccg tcgcgggcaa ctcgacagcc
     9121 gggtggaagg atttatgctc ggcgagctgg atatgctgaa aaacggtatc aactcgatgg
     9181 caatgtcgct ggctgcttat cacgaagaga tgcagcacaa tatcgaccag gcgacgtccg
     9241 atctgcgtga aacgctggag cagatggaaa ttcagaacgt tgagttggat ctggcgaaaa
     9301 agcgcgccca ggaagcggcg cgtattaaat ccgagtttct ggcaaatatg tcacacgagc
     9361 tgcgtacacc actgaatggt gttattggct ttacccgcct gacgctgaaa acagaattaa
     9421 caccaacgca gcgcgatcac ctgaatacga ttgaacgttc ggcaaataat ttgctggcaa
     9481 ttattaatga tgttctcgac ttctcgaaac tggaagcagg taagctgatt ctggaaagta
     9541 ttccattccc actacgcagc acgctggatg aagtcgttac tctgctggca cattcttctc
     9601 acgataaagg gttggaactg acgctcaata ttaaaagcga cgtgcctgat aacgtgatcg
     9661 gcgacccact gcgattacag caaatcatca ctaacctggt ggggaatgca attaaattca
     9721 ccgagaatgg caacattgat attctggtag aaaaacgtgc gctgagtaat accaaagtgc
     9781 agattgaagt gcagattcgg gataccggca ttggtattcc tgaacgcgat caatcgcgct
     9841 tattccaggc cttccgacag gctgatgcca gtatttcccg ccgtcatggt ggcaccgggc
     9901 tggggctggt gattacacaa aaactggtta atgaaatggg cggcgatatt tcgttccata
     9961 gccagccgaa tcgcggttca actttctggt tccacattaa tctcgatctg aacccgaaca
    10021 ttattatcga agggccatcc acccagtgcc tcgcaggtaa gcgcctggcc tatgtcgaac
    10081 caaactccgc agcagcgcaa tgcacgctgg atattttaag tgaaacgccg ctggaagtgg
    10141 tttatagccc aacgttctcc gcgctgcctc ccgcgcatta cgacatgatg ttgttaggca
    10201 tcgcggtgac cttccgcgag ccgctaacaa tgcaacatga gcgattagcg aaagcggtat
    10261 cgatgaccga tttcctgatg ctggcacttc cttgccatgc acaagtcaat gctgaaaaac
    10321 tcaagcaaga tggtatcggc gcgtgtctgc tgaaaccatt aacacctaca cgcctgttgc
    10381 ctgccctgac ggaattttgt catcacaaac aaaacacgct tttgcctgta accgatgaaa
    10441 gtaagctggc aatgacagtc atggcggttg atgacaaccc cgctaacctg aaacttatcg
    10501 gcgcattgct ggaagatatg gtgcaacatg tggaactttg cgatagcggg catcaggcgg
    10561 ttgaacgggc gaaacagatg ccgttcgatt tgatcttaat ggatattcaa atgccggaca
    10621 tggatggcat tcgggcctgc gaactcatcc accagctccc ccatcagcaa caaacgccgg
    10681 ttatcgcggt aacggcgcat gcaatggccg ggcaaaaaga gaagctgctt ggcgcaggga
    10741 tgagcgatta tctggcgaaa ccgattgaag aagagcgatt gcataatttg ttgttgcgct
    10801 acaagcctgg cagcggtatt tcctctcgcg tcgtgacgcc cgaagtcaac gaaattgtgg
    10861 tgaacccgaa tgcgaccctc gactggcaac tggcactacg ccaggcagca ggaaaaaccg
    10921 atttagcgcg cgatatgctg caaatgttac tcgatttcct gcctgaagtt cgcaacaaag
    10981 ttgaggaaca gctggttgga gaaaacccgg aaggcctggt tgatttgatt cataaactgc
    11041 atggcagttg cggctatagc ggtgtgccgc gtatgaagaa tctctgccaa ctgatcgaac
    11101 aacagctacg tagcggtact aaagaagaag atttggagcc ggagctgctg gaactgttgg
    11161 acgagatgga taatgtcgcg cgcgaagcca gcaaaattct cgggtaacgg acgtcttgtc
    11221 gagtagcaat cggcttttta tgacgctggt ttcagattgg tgacaaagtg cctgtgttta
    11281 tgccggatgc ggcgttaacg ccttatccgg cctacaaaac caattaaatt caatgaatta
    11341 aaaaatgatg tagacctgat acatagcaca acaggctatt ttgcgtttag catcagtctc
    11401 aagccggctc cagatagagc cggttttggt tttctgtctt aacgcaccat gcacgggcgc
    11461 ttgttatcga acgtccagcc aggaatcaga tactgcattc ccatcgcatt gtcacgcgcg
    11521 caaagcccgt gtttctgata cagctcatgg gctttcatca cttgatccat atcgatttct
    11581 acacccagcc ccggtttttc cggcacctga accagaccgc ctttgatctc aaacggttct
    11641 ttggtcaagc gctgattgcc ttcctgccaa atccagtgcg tatcaatcgc ggtgatttta
    11701 cccggtgcag cggcggcaac atgggtaaac atcgccaggg aaatatcgaa gtggttgttt
    11761 gagtgtgaac cccaggtcag gccaaattca tggcacattt gcgccacacg taccgaacct
    11821 tgcatcgtcc agaaatgcgg atccgccagc gggatatcaa cggattgcag ggagagcgta
    11881 tggcccatct gccgccagtc ggtggcgatc atattggttg cggtcggcag gccagttgcg
    11941 cgacggaact ctgccatcac ttcacgcccg gagaaacctt gctccgcacc acacggatct
    12001 tctgcataag ccagcgaccc tttcaggtat ttaccaattt taatcgcttc gttcagcgac
    12061 caggcaccgt taggatcgag cgtaatacgc gcctgcggga agcgttgcgc cagtgccaca
    12121 atagactcgg cctcttcttc cccggccagt acaccgcctt tcagtttgaa atcgttgaag
    12181 ccatattttt catacgccgc ttccgccagg cgcaccaccg catccggcgt catcgcttct
    12241 tcatgacgca ggcgatacca gtcgcatgag tcatccggct ggctttgata cggcagcggt
    12301 gtggctttgc gatcaccgac gaagaacaga taaccgagca tttcgacttc gctacgctgt
    12361 tgaccatcgc ccagcaggga tgccacgttt acccccagat gctgccccag cagatccagc
    12421 attgccgctt ctatcccggt aactacatga atagtggtac gcaaatcaaa tgtctgcaaa
    12481 ccgcgcccac cagcatcacg atcggcaaaa gtattacgca ccagcgtcag aacgtttttg
    12541 tattcaccca gcgttttacc taccaccagc ggaatcgcat cttccagcgt tttacggatt
    12601 ttctcgccgc cgggaatttc ccctacgcca gtgtgaccag aattatcttt gataatcata
    12661 atattacgcg taaagaacgg tgcgtgtgca ccactcagat tcatcagcat actgtcatga
    12721 cccgccaccg ggatgacctg catttcagta acaacaggcg tcgtaaattg agaactcata
    12781 tttatgtcct ttttcagaat caatgacggc cgaaaacggg acgtttacgg tcaaaggtcc
    12841 agccggggat caggtactgc atcggacctg cgtcgttacg cgcaccgcca ggcagacgtt
    12901 tataggcctc atgtgccttt tgtacctgtt cccagtccag ttccacgccc agaccgggcg
    12961 catcaggaac ggcaattttt ccgtttttaa tctccagcgg atttttggtc aggcgacaat
    13021 cgccctcctg ccaaatccag tgggtatcga tagcggtagg attacccggt gccgccgcgc
    13081 ccacatgggt aaacatcgcc agagagatat cgaaatggtt attagaatgg cagccccagg
    13141 tcagccccca gtcgtcgcaa agctgcgcca cacggactgc accggaaagc gtccagaagt
    13201 gcggatcggc aagtggaata tctaccgcat tgagcatcac cgcatgaccc atttcgcgcc
    13261 agttggtggc gatcatgtta gtcgcgacgg gcaagccggt cgcccgccga aactccgcca
    13321 taacttcacg accggagaaa ccctgttctg cgccgcatgg atcttcggca taggtaagaa
    13381 catcattcag ccctttgcat agagaaatgg cttcatcaag tagccaggca ccgttgggat
    13441 caacggtaat ccgcgcatca gggaagcgtt tcttcaatgc acgaacagtg tcgatttctt
    13501 gctcgccagg taacaccccg cccttaagtt tgaaatcttt aaagccatag cgatcctgtg
    13561 aggcttccgc cagacgcaca acggcttcgc tgttcatcgc tttctgatgg cgcaactgat
    13621 accactcatg gttgcccggc gtattttcca gataaggaag atcggttttg gtccgatcac
    13681 cgatataaaa cagataaccg aggacggtaa tagtctcgcg ttgcttgcct ggccccaaca
    13741 gttcgcagac cggaacattc agcgccttac ctagcaggtc aagcaaggcg gcttccagcg
    13801 ccgccacggc attaacgtgc aattcaaaag tccaggcacc tttgccgaag gtatcaaaat
    13861 cggctgcctg attaccttta tgcacctgct gaaccacttt attcaggcgc gcaacttcct
    13921 ggcccagaac catcggaata gcatcgacca gtgtttgata aatcacctct ccgcccggcg
    13981 cttcaccaat gccggtatgc ccggcgttat cggtgagtac cacaatattg cgggtgaaat
    14041 atgcgttatg tgccccacca atattaagca acatgctatc gtgcccggcg accggaatga
    14101 ctttcatatc agtaataaca ggactggatt gtgtcgtcat cttattgccc cgcgacaggt
    14161 ttcagctcga tacgcttgat atcgcccacc agcaccaggt agctcagtac cgcgattaag
    14221 gcatgaacac caacataaat cagcgcccca ttaaaggagc cagtcgtgcc aacgatataa
    14281 ccaattgcga ttggcgtgac gatgccagaa atgttaccga acatgttgaa caggccaccg
    14341 gaaagaccgc tgatctcttt tggcgcggta tctgccatta ctgcccaacc cagcgccccg
    14401 atgcccttac cgaagaaggc cagcgccata aagccgatga tcatccactc aacgttgacg
    14461 tagttgcaga acaccatcac catcgacagc aacatgccca ttacgatcgg tgttttacgc
    14521 gcaatgttca gcgatcccgt gcggcgcatc agccagtcgg aaataatccc acccagcaca
    14581 ccgccgataa aaccgcaaac cgccggaacg gaagccacaa agcccgcttt cagaattgac
    14641 atcccacgcg cctgcaccag ataaaccgga aaccaggtaa tgaaaaagta agtcagggcg
    14701 ttgatacagt actgaccgat ataaacgccg atcatcatcc gtgacccgag cagttgtttg
    14761 atctgccccc acttcacgct gaacggcact ttaactttgg tgttttgctg atccatattg
    14821 atcagcgcgc cacccgcggc gatgtactcc agctctttct gatttacccc cggatgttga
    14881 tttggctcgt ggatgacttt caaccagata aagctgatga caatccccag accgcccata
    14941 aagaagaaga cgtgtgacca gcccacttca tgcgtcagcc agcccataat cggcgcgaag
    15001 atcaccgttg cgaagtattg agcggagtta aaaatcgaca ccgccgttcc cctttcctgc
    15061 gccggaaacc aagccgcaac aatgcgactg ttgccgggga aagatggcgc ttcagcaagc
    15121 ccgaccagga agcgcagagt aaacagggca acgataatgc cgaatccact aaagatatcg
    15181 acgaagcctt gcagcaaggt aaacatcgac cagataaaga tcgaccagaa gtagacgcgt
    15241 tttgaaccaa aacgatccag caaccaacca ccagggatct gcccgataac ataagcccat
    15301 gagaaggcag agaacacata gcccattccc acgggatcaa ggccgatatc tttggccatt
    15361 tccgaaccgg caatagaaag cgtagcgcgg tcgccgtagt tgaaggatgt gacgataaac
    15421 aacatcacca ctatccagta acgagcattc gtgcgttttt ccacactgct cgcagcctga
    15481 cttaaagaac tcgttgttgc actcctgaaa attcgcgtta gccacgctaa ctctggactg
    15541 cgacatagcc aggaaatcag aggtgacgta gggtgttttt tgccgttttt ataggtcgtt
    15601 cgccgaatac ggcgcgtgtt tatatctggc aatagcagta taaaaagcgc gccatagcgg
    15661 ctcaccgtgc aacaacacaa cattaatgcg ttcaatgagg cccgattttg gcattagccc
    15721 tggacggtgg aatccacttc acggaaatga aaacaagaac aagaaaggaa gggttaaaac
    15781 gaagaaataa agaagagtat gaaatggatc gcttgactcc aggcaaacgc cagtaaaaat
    15841 ccgcgctatg aagcagtttt tactggcatt tgcctgaaaa gattcgattc agcaccgcta
    15901 aaacgacatt taccgctcgc tgaacatatc aggacaacag cgtgccccac tgttcgaccc
    15961 acggatttga ttccgtttcc ggttccgggt tctcactggc gtcaatcaac agcatttcgc
    16021 caactcgctg agcgctctgt tcctgcaaca aggcatcgaa ctgtttgccg ccattgcaga
    16081 aatttacata actgctgtcg ccgagcgcaa tcacgccata acgcagattc ggctggaagc
    16141 ccagactatc tttgattccc tgaaagagcg gcacaatgct atcaggaagg tcgccctgcc
    16201 cggtcgtgga cgtaaccacc agaacatact tatcctgata aggcagccag tcgcttaatt
    16261 caggatcttc aaataccgtt gctttgtggc cctgtgcggt cagaattgct tctgcttctt
    16321 ccgccactaa cagcgaattt ccgtacatgg tgccgacaaa aataccaatt tccgccatac
    16381 cgttttctcc ctggattagg aacttatctc tccatcctga cccgatggcg cactgaactc
    16441 aaccctttca ttttcaggaa gcagaccgcg ccagccaaat tgtgataacg cctgcatcca
    16501 ggtgtcgtcc aggcccgcgt gaatagtcag cggctcgcca gtaaaaggat gcgtcaatga
    16561 caactgactg gcatgtagca ttaaccgctg gaggccaaaa tgctcagcac cgctgcgatt
    16621 ctggcgtaaa tcgccatgtt tgctatcgcc aataatcgga tgacgcaaat gggcaagatg
    16681 tcggcgaagc tgatgtttgc gtccggtttt cggctccagt tccaccaggc cgtagcgcgt
    16741 ggtcgggtaa cgtccggtcg ctaccggcat ttctacggtc gccagaccgc gataatgcgt
    16801 cactgctggc tgcgggcctt tatcttcgcg ggcaaattta tcagcgattt tgtccagttc
    16861 ttccaccagt ggataatcca gcaccgcttc ttccatcaac cagccgcgca caatcgcatg
    16921 gtaacgtttc tggatttggt gctgttcaaa ctgttgtgcc agcagccgtc cggcctcgct
    16981 ggataatccc atcaacaaca caccagaagt gggtcggtcc agacgatgag cagtaaaaac
    17041 atgctgtcct atctggttac gcacggtttg catgaccact actttctcgt cgcgatccag
    17101 ccagctacgg tgaaccagcc agccggaggg tttatttacc gaaaccagcc attcatcctg
    17161 atagagtatt tccagcatta gctcgcatca tccgcaaaaa gagcatccag tttttccaac
    17221 tcagccagaa taagcgcgtg ttgcggatgg tccgtcgcca gcgccatttc ataatagggt
    17281 gcaacagcaa aagcgcccgg taacggctgg ttgttattta acaaatcgtg cattcgcggg
    17341 atcagcaccc actgcaacca ctccagtggt tccatggtgt ccataaagaa cggttgggta
    17401 ctattaaatt gatgcggctg gggttcatcg tttcgccagt gctgatgttc acgcagtaac
    17461 gcttcaagcg cctgcaactg gagacgaacg cggtcatgag tggtcataaa gcaacctcaa
    17521 taagaaaaac tgccgcgaag gatagcagga ataaaaaaag ggagcactgt attcacagcg
    17581 ctcccggttc gtttcgcagc attccagcta cttttgttgc tccctgctca tccttgacaa
    17641 cttttcctct ggccttgcgg ccaatcgttc atcctgaact attgcttcct gctcacacca
    17701 ccccgatgtg atacttcatc ctgaagtgtc cttggccttc ctgaccagcc gaatcatcct
    17761 gaccggttct cattctccat cctggaggtg tcctttaacg cgtcctgcgt catcctcttc
    17821 gcttcatcca gaagcctttc cctgaaacac catcctggtg tgtcctgcag aagtgtcatc
    17881 atcctgatgt tcacttcgtt gtctgactcc ctgtcgacga agatagaatc gtctttttcg
    17941 cgaagtctta caaggcgctt acagacaatg ccttaaggaa aatttcatat gaaagttaag
    18001 aattaacaat caacattttg attttaaatg aaaataacga ttcttatctt tttaagtatt
    18061 cgcttatttc ctggcgatct cctacagagt ctgtaagaga tctctcacaa ccagatgggg
    18121 tatttggatt acagaagagg cttaagttga ttaaggaatt ccgcaagatt tgaggctaaa
    18181 tgcgtccgtt tacgtgttcc cagcgtctct ttgcacactt caccggagag attacacacc
    18241 gagatgacct ctaactcttc ttccagcgtc gcgataaata gcgtgggcgg cagttttagc
    18301 cttttctgag tcaccagatg accaatcaga ttttcctgca cccgacggaa gtcgtcttca
    18361 ctccaggttt gcagcaatgt cagtttgata tcgccaaact gcgcgtgcat atccccggca
    18421 aactgagtcg tataaaaggt atgaattgtg ggttgtatca caatatcaaa agcgcgttca
    18481 accgcgttta cattttgttc cccggtaaac ggctggggtt gccagtatac ggcatcttcg
    18541 gtagttgaaa taatgcacgg tgaaggaaca ccgtacagtt cctcacttaa cggccagctt
    18601 ttatgctctt catgccacgc atcgcagtag cgtgcagtaa aatctttcag ggcttgtgcg
    18661 gtcaaatcgt ccactaattt ctctcttcac ttaaaccaga tacacttgtc gtttagttta
    18721 tctggtttat gacggtgaaa catgtcttct tatgcaaacc atcaggcact tgcgggcctg
    18781 actcttggaa aatcaaccga ttaccgggat acctatgacg ccagcctact gcaaggcgtt
    18841 ccacgcagcc tgaatcgcga cccgctgggt ctgaaagcgg ataacctgcc ttttcacggt
    18901 acggatatct ggacgctgta tgaactttcc tggctgaatg cgaaaggttt gccgcaggtc
    18961 gctgtcggtc atgttgaact tgattacacc agcgtaaatc tgattgagtc gaagagtttt
    19021 aagctctatc tcaacagttt taaccagacg cgttttaata actgggatga ggtgcgccag
    19081 acgctggagc gcgacttaag cacttgcgct cagggtaaga ttagcgtggc gttatatcgt
    19141 cttgatgaac tggaaggcca gccgataggt cattttaatg gcacttgcat tgatgaccag
    19201 gatatcacta tcgataacta tgaattcact actgactatc tggagaatgc cacctgtggt
    19261 gaaaaagtag tggaagagac gcttgtcagc cacctgctga aatcaaactg cctgatcacc
    19321 catcaaccag attggggttc gatccaaatt cagtatcgtg gacgccaaat tgacagagaa
    19381 aaactgctgc gttacctggt ctcattccgt catcacaacg agttccacga acagtgcgtg
    19441 gaacgcatct ttaatgacct gttacgcttc tgccagccag aaaaattgag cgtttacgca
    19501 cgttataccc gtcgtggcgg tctggacatt aacccgtggc gcagtaatag cgattttgtc
    19561 ccatcgacca caagactggt tcggcaataa attttttctc aattttgcgt gctggattca
    19621 cgcagaaggt tgtgaaaggt catcaggcag ggctattgta atcaaaggga atgacgatat
    19681 tcgtcccata aggagttttt cttgattaca catattagcc cgcttggctc catggatatg
    19741 ttgtcgcagc tggaagtgga tatgcttaaa cgcaccgcca gcagcgacct ctatcaactg
    19801 tttcgcaact gttcacttgc cgtactgaac tccggtagtt tgaccgataa cagcaaagaa
    19861 ttgctgtctc gttttgaaaa tttcgatatt aacgtcttgc gccgtgaacg cggcgtaaag
    19921 ctggaactga ttaatccccc ggaagaggct tttgtcgatg ggcgaattat tcgcgctttg
    19981 caggccaact tgttcgcggt cctgcgtgac attctcttcg tttacgggca aatccataac
    20041 accgttcgtt ttcccaacct gaatctcgac aactccgtcc acatcactaa cctggtcttt
    20101 tccatcttgc gtaacgctcg cgcgctgcat gtgggtgaag cgccaaatat ggtggtctgc
    20161 tggggcggtc actcaattaa cgaaaacgag tatttgtatg cccgtcgcgt cggaaaccag
    20221 ctgggcctgc gtgagctgaa tatctgcacc ggctgtggtc cgggagcgat ggaagcgccg
    20281 atgaaaggtg ctgcggtcgg acacgcgcag cagcgttaca aagacagtcg ttttattggt
    20341 atgacagagc cgtcgattat cgccgctgaa ccgcctaacc cgctggtcaa cgaattgatc
    20401 atcatgccag atatcgaaaa acgtctggaa gcgtttgtcc gtatcgctca cggtatcatt
    20461 atcttccctg gcggtgtggg tacggcagaa gagttgctgt atttgctggg aattttaatg
    20521 aacccggcca acaaagatca ggttttacca ttgatcctca ccggcccgaa agagagcgcc
    20581 gactacttcc gcgtactgga cgagtttgtc gtgcatacgc tgggtgaaaa cgcgcgccgc
    20641 cattaccgca tcatcattga tgacgccgct gaagtcgctc gtcagatgaa aaaatcgatg
    20701 ccgctggtga aagaaaatcg ccgcgacaca ggcgatgcct acagctttaa ctggtcaatg
    20761 cgcattgcgc cagatttgca aatgccgttt gagccgtctc acgagaatat ggctaatctg
    20821 aagctttacc cggatcaacc cgttgaagtg ctagctgccg acctgcgccg tgcgttctcc
    20881 ggtattgtgg cgggtaacgt aaaagaagtc ggtattcgcg ccattgaaga gtttggtcct
    20941 tacaaaatca acggcgataa agagattatg cgtcgtatgg acgacctgct acagggtttt
    21001 gttgcccagc atcgtatgaa gttgccaggc tcagcctaca tcccttgcta cgaaatctgc
    21061 acgtaatctc ccctcccccg gtgacgtttg ttgccgggtt ttctcgtttt tggtcactta
    21121 ctcatcaact catttcattt gttatatgaa tgtttcttac caccctcacg cgacaaatat
    21181 catcacagtt aatatgtcat acaatttatg ttgcaacgca aacgtttccc tattttcata
    21241 aaccgtattt tatcgctatg aaaaagaaat tatcgccatg attaactaaa agtattgatt
    21301 ttttcagttc aacctacata tattgcgcgc cctggaagaa gtcagatgtc gtttaatggg
    21361 caaatattgc ccttaaattc tcttttactt ttgatttaca gagtaaagcg ttgggataat
    21421 ctatcttcca agtagattat tgtatttgag atcaagatca ctgatagata cataacttgt
    21481 gtgtatcttt ccgccctcaa attattacgg cggtaaatga ttaagccatc gccgatagac
    21541 agatttcatt tttacggtca ggcaccttcc cgggctgaac tggctaaaag ctgaattatt
    21601 tgcattcctc caggagaaat agatggaaac gactcaaacc agcacgattg cgtcgaaaga
    21661 ctctcgtagt gcctggcgca agacagacac catgtggatg ctgggccttt acggcacggc
    21721 aatcggcgcg ggcgtgctgt tcctgccaat caacgccggt gttggcggta tgatcccgct
    21781 gatcatcatg gctatccttg cgttcccgat gacgtttttt gctcaccgcg gcctgactcg
    21841 cttcgtactg tctggtaaaa acccgggcga agacatcacc gaggttgtag aagaacactt
    21901 tggtattggc gcaggtaaac tgattaccct gctctacttc ttcgctatct acccgatcct
    21961 gctggtttat agcgtggcaa tcaccaatac agttgaaagc ttcatgtctc accagctggg
    22021 tatgacgcca ccgccgcgtg cgattctgtc gctgatcctg atcgtgggta tgatgaccat
    22081 cgttcgcttc ggtgagcaga tgatcgttaa agcgatgagt attctggtgt tcccgtttgt
    22141 tggcgtattg atgctgctgg ctctgtacct gatcccgcag tggaacggcg cagcactgga
    22201 aacgctgtct ctggacactg catctgcaac cggaaacggt ctgtggatga ccctgtggct
    22261 ggcaattccg gtaatggtgt tctcgttcaa ccactctccg atcatctctt ctttcgccgt
    22321 tgcgaagcgt gaagagtacg gcgatatggc agaacagaaa tgctcgaaga tcctggcatt
    22381 cgcacacatc atgatggtgc tgaccgtaat gttcttcgtc ttcagctgtg tactgagcct
    22441 gactccggca gacctggctg cggctaaaga gcagaacatc tcgattctgt cttacctggc
    22501 taaccacttt aacgcaccgg ttatcgcgtg gatggctccg attatcgcga ttatcgctat
    22561 caccaaatcc ttcctcggcc actacctggg cgcacgtgaa ggcttcaacg gtatggtgat
    22621 taaatctctg cgtggtaaag gtaagtctat cgaaatcaac aagctgaacc gtatcactgc
    22681 gctgttcatg ctggtaacga cctggattgt tgccaccctg aacccgagca tcctgggtat
    22741 gattgaaacc ctgggcggtc caatcatcgc gatgatcctg ttcctgatgc cgatgtacgc
    22801 aattcagaaa gtaccggcaa tgcgtaagta cagcggtcac atcagcaacg tattcgttgt
    22861 cgtgatgggt ctgattgcaa tctccgcaat cttctactct ctgttcagct aagtcctttc
    22921 gcgccgcttt cgggcggcgc ttcctccgtt ttaacgcgat gtatttccta tgattagcgt
    22981 attcgatatt ttcaaaatcg gcattggccc ttccagttct cataccgttg gaccaatgaa
    23041 agcgggtaaa caatttaccg acgatctgat tgcccgtaac ctgcttaaag acgtgacccg
    23101 cgtggtggtt gacgtgtacg gctcgctctc tctgaccggt aaaggccacc acactgatat
    23161 cgccattatt atgggcctgg cgggtaacct gccggatacc gtggatatcg attccatccc
    23221 tggttttatt caggatgtga atactcatgg tcgcctgatg ctggcaaacg gtcagcatga
    23281 agtggagttc ccggttgatc agtgcatgaa cttccacgcc gacaaccttt ctctgcatga
    23341 aaacggtatg cgcattaccg cgctggcggg cgataaagtc gtttacagcc agacttacta
    23401 ctctattggc ggtggcttta tcgttgatga agagcatttt ggccagcagg atagcgcacc
    23461 ggttgaagtt ccttatccgt acagttcagc agccgatctg caaaaacatt gtcaggaaac
    23521 cgggctgtca ctctctggcc tgatgatgaa aaacgagcta gcgctgcaca gcaaagaaga
    23581 gctggaacag cacctggcga acgtatggga agtcatgcgt ggcggtattg agcgcggtat
    23641 ttccaccgaa ggcgtgttgc ctggcaaact gcgcgttcca cgccgtgctg cggcactacg
    23701 ccggatgctg gtcagccagg ataaaaccac cactgacccg atggcggttg ttgactggat
    23761 caacatgttt gcactggcag tgaacgaaga gaacgctgct ggcggacgcg tggtgactgc
    23821 gccgactaac ggtgcgtgcg ggattatccc ggcagtgctg gcgtactacg acaagtttat
    23881 ccgcgaagtg aacgctaact cactggctcg ttacctgctg gtagccagtg ccattggttc
    23941 tctttataag atgaacgcgt caatttctgg tgctgaagtc ggctgccagg gtgaagttgg
    24001 tgtggcgtgc tcaatggcgg cggctggtct ggcagaactg ttaggtgcaa gcccggcgca
    24061 ggtgtgcatc gcggcggaaa tcgccatgga gcacaacctc ggtctgacgt gtgacccggt
    24121 cgccggacag gtccaggtgc catgcatcga gcgtaacgcc attgcggcag taaaagcggt
    24181 gaacgccgca cgtatggcgc tacgccgtac cagcgagccg cgcgtctgcc tcgataaagt
    24241 tatcgaaacc atgtacgaaa caggtaaaga tatgaacgcc aagtaccgcg aaacctctcg
    24301 cggcggcctg gcaatgaaga tcgttgcctg cgattaatcg ctctccagag gcctcgtttt
    24361 gcgaggcctc ttcccgattt ctcatccagc cgtagcctgt tccggcatcg aatgttaccc
    24421 ttatcgcctg atctttaagg gggttatcgt ggctgttcat ttgcttattg tcgatgcact
    24481 gaatcttatt cgtcgcattc atgccgttca gggatcgccc tgtgtcgaaa cctgccagca
    24541 tgcgctcgat cagctcatta tgcacagcca gccaacccac gcggtcgccg tttttgatga
    24601 tgaaaaccgc agtagcggct ggcgtcatca gcgtttacca gattacaaag cgggtcgacc
    24661 gccaatgccg gaagagttgc acgacgagat gcctgcatta cgcgccgcct ttgagcaacg
    24721 cggcgtcccg tgctggtcaa ccagcggcaa cgaagccgat gacttagccg ccacgctggc
    24781 ggtcaaagtg acacaggccg ggcatcaggc aacgattgtt tcgacagata aaggctactg
    24841 tcagttactt tcaccgacat tacgtattcg tgattacttc cagaaacgtt ggctggatgc
    24901 gccatttatc gataaagaat ttggcgttca accgcagcag ttgcccgatt actggggact
    24961 tgcggggatc agcagttcaa aggtaccggg tgttgcggga atcggaccaa aaagcgccac
    25021 gcagctgctg gtcgagtttc agagtctgga agggatatat gagaatctgg atgcggttgc
    25081 cgaaaagtgg cgcaaaaaat tagaaaccca taaagagatg gcgtttctgt gccgcgatat
    25141 tgcccgctta caaaccgatt tgcatatcga cggcaattta cagcaattgc ggttggtacg
    25201 gtaacggcga gccggatgca aacgattatc aacacattga atttaatgca cttatatacc
    25261 ggataagacg cggctagcgt cgtatccggc attatcacat cagcgcattt accaggcggt
    25321 atggtaaagc tctacaatat cctcaagcgt tgcttcacgc gggttgccac cggtacaaac
    25381 atcatccagt gccgcctgcg ccagtgccgg aatgtcttcc ttgcgtacac caacatcacg
    25441 caaatgtggc ggaataccga catcacggtt gagagcaaac accgcttcaa cagcggcatt
    25501 acgcgcctct tccagccact ttcacgccca taacgcgcgc gatatcgcgg tacttctcac
    25561 cggtaaagtc agcgttatag cgcatgacat gcggtaacag gatggcgttc gcaacaccgt
    25621 gtggagtgtt gtaaaacgcg cccagtggat gcgccatacc atgcaccaac cctaacccaa
    25681 cattcgagaa gcccataccc gcaacatact gcccgagcgc catttcttct ccggcatcct
    25741 tatcaccagc aaccgatcct cgcagcgccc cagcaatgat ttcaatcgct ttaatgtgca
    25801 gtgcatcggt tagcgcccac gcgccacggg taatataccc ctcaatagca tgagtgagcg
    25861 catcgacacc cgtcgcagct ttcagcgctg gaggcatacc atccatcatg tcagcgtcaa
    25921 taaacgccac ctgcgggata tcatgcggat caacgcaaac aaacttgcgc cgtttctctt
    25981 cgtcagtgat cacgtagtta atggtcactt ctgccgcagt acctgctgtg gtaggaattg
    26041 ccagaatcgg tacactgggt ttattggtcg gggaaagccc ttccaggcta cgcacatcgg
    26101 caaactccgg gttgttgctg ataatgccaa tcgctttaca agtatcctgt ggagaaccac
    26161 caccaatagc gatcaggtaa tccgcgccgc tattctggaa tacaccgagc ccttctttga
    26221 cgacagtaat tgttgggttg ggcactacgc cgtcgtaaat cgcccatgcc agccctgcag
    26281 catccatctt atcggtcact ttcgccacca cgccgcattg caccagcgtt ttatcggtga
    26341 cgatcagcgc cttctgataa ccacggcgtt tcacctcatc ggttaaagcc ccaacagcac
    26401 cccgaccaaa ccatgccgtt tcgttcagaa tcattctgtt agccatcatc cttctccttg
    26461 ttgctttacg aaattactct tcaatccgta acccataggt tttgaatttc tccagcacta
    26521 cggcaatctc ttcatcgctc agcactggca ccgggtccgt aatcgccagg gtcgtcaggt
    26581 aaagttgcgc cagcacttca acttcatgcg ccagccataa cgctttttcc agattcacct
    26641 cacaagcgat aagcccatga tgttgtaaca aagttgcctt acgatttttg agagccagcg
    26701 caacatgttc agaaagttcg cgtgttccaa aggtcgcata agacgcgcaa ggaatagaat
    26761 taccacctgc cgccgcaatc atgtagtgaa tagcggggat cggtcggtta agaatggaaa
    26821 ctgctgtgca atgaacggca tgattgtgaa caaccgcgtt ggcatccggt ctgctttgat
    26881 aggccgccat atggaaacgc cattcgcttg aggggagctt tccttcctca tgtttaccgt
    26941 taccatcaat aaaggcaata tgcgactccg tcagtttttc atatggaatg cctgtaggcg
    27001 taatcagcat cccatcctga taacgtacac tgacgttccc cgctgtcccc tggttcagtc
    27061 ccaggcgggt catttccagg caagtgtcaa taatctgacg agcaagttta tttcgttcca
    27121 ttagctacct ctctctgatt caaaacaggg caataatgtt gttcctttca cactattgaa
    27181 ttagccgttt aattacccac cat
//
LOCUS       DADMJE010000042        26779 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.043, whole genome shotgun sequence.
ACCESSION   DADMJE010000042 DADMJE010000000
VERSION     DADMJE010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 26779)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26779)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26779
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.043"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..326)
                     /locus_tag="JN001_001598"
     CDS             complement(<1..326)
                     /locus_tag="JN001_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY9052864.1"
                     /translation="MTISTTSTPHDAVFKSFLRHPDTARDFIDIHLPAPLRKLCDLTT
                     LKLEPNSFIDEDLRQYYSDLLWSVKTQEGVGYIYVVIEHQSKPEELMAFRMMRYSIAA
                     MQNHLDA"
     gene            complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JN001_001599"
     CDS             complement(523..1296)
                     /gene="hisP"
                     /locus_tag="JN001_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter ATP-binding protein
                     HisP"
                     /protein_id="HAY9052865.1"
                     /translation="MSENKLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGK
                     STFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFN
                     LWSHMTVLENVMEAPIQVLGLSKQEAHERAVKYLAKVGIDERAQGKYPVHLSGGQQQR
                     VSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHV
                     STHVIFLHQGKIEEEGAPEQLFGNPQSPRLQQFLKGSLK"
     gene            complement(1304..2020)
                     /locus_tag="JN001_001600"
     CDS             complement(1304..2020)
                     /locus_tag="JN001_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9052866.1"
                     /translation="MIEILHEYWKPLLWTDGYRFTGVAITLWLLILSVVIGGVLALFL
                     AIGRVSSNKYIQFPIWLFTYIFRGTPLYVQLLVFYSGIYTLEIVKGTEFLNAFFRSGL
                     NCTVLALTLNTCAYTTEIFAGAIRSVLHGEIEAARAYGFSTFKMYRCIILPSALRIAL
                     PAYSNEVILMLHSTALAFTATVPDLLKIARDINAATYQPFTAFGIAAVLYLIISYVLI
                     SLFRRAEKRWLQHVKPSSTH"
     gene            complement(2017..2703)
                     /locus_tag="JN001_001601"
     CDS             complement(2017..2703)
                     /locus_tag="JN001_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311219.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HAY9052867.1"
                     /translation="MLYGFSGVILQGALVTLELAISSVVLAVIIGLIGAGGKLSQNRL
                     SGLIFEGYTTLIRGVPDLVLMLLIFFGLQIALNTVTEAMGVGQIDIDPMVAGIITLGF
                     IYGAYFTETFRGAFMAVPKGHIEAATAFGFTRGQVFRRIMFPAMMRYALPGIGNNWQV
                     ILKSTALVSLLGLEDVVKATQLAGKSTWEPFYFAIVCGVIYLVFTTVSNGVLLFLERR
                     YSVGVKRADL"
     gene            complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JN001_001602"
     CDS             complement(2793..3575)
                     /gene="hisJ"
                     /locus_tag="JN001_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine ABC transporter substrate-binding
                     protein HisJ"
                     /protein_id="HAY9052868.1"
                     /translation="MKKLVLSLSLVLAFSSATAAFAAIPQNIRIGTDPTYAPFESKNS
                     QGELVGFDIDLAKELCKRINTQCTFVENPLDALIPSLKAKKIDAIMSSLSITEKRQQE
                     IAFTDKLYAADSRLVVAKNSDIQPTVESLKGKRVGVLQGTTQETFGNEHWAPKGIEIV
                     SYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKDYKFGGPSVKDEKLFGVGTG
                     MGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVYGG"
     gene            complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JN001_001603"
     CDS             complement(3796..4578)
                     /gene="argT"
                     /locus_tag="JN001_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine/arginine/ornithine ABC transporter
                     substrate-binding protein ArgT"
                     /protein_id="HAY9052869.1"
                     /translation="MKKSILALSLLVGLSAAASSYAALPETVRIGTDTTYAPFSSKDA
                     KGDFVGFDIDLGNEMCKRMQVKCTWVASDFDALIPSLKAKKIDAIISSLSITDKRQQE
                     IAFSDKLYAADSRLIAAKGSPIQPTLDSLKGKHVGVLQGSTQEAYANETWRSKGVDVV
                     AYANQDLVYSDLAAGRLDAALQDEVAASEGFLKQPAGKDFAFAGSSVKDKKYFGDGTG
                     VGLRKDDAELTAAFNKALGELRQDGTYDKMAKKYFDFNVYGD"
     gene            complement(4844..5413)
                     /locus_tag="JN001_001604"
     CDS             complement(4844..5413)
                     /locus_tag="JN001_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UbiX family flavin prenyltransferase"
                     /protein_id="HAY9052870.1"
                     /translation="MKRLIVGISGASGAIYGVRLLQVLRDVTDIETHLVMSQAARQTL
                     SLETDFSLREVQALADVTHDARDISASISSGSFQTLGMVILPCSIKTLSGIVHSYTDG
                     LLTRAADVVLKERRPLVLCVRETPLHLGHLRLMTQAAEIGAVIMPPVPAFYHRPQSLD
                     DVINQTVNRVLDQFAITLPEDLFARWQGA"
     gene            complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JN001_001605"
     CDS             complement(5508..7025)
                     /gene="purF"
                     /locus_tag="JN001_001605"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006820991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HAY9052871.1"
                     /translation="MCGIVGIAGVMPVNQSIYDALTVLQHRGQDAAGIITIDANNCFR
                     LRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNSPYGITLAHN
                     GNLTNAHELRKKLFEEKRRHINTTSDSEILLNIFASELDNFRHYPLEADNIFAAIAAT
                     NRLIRGAYACVAMIIGHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLG
                     FDFLRDVAPGEAIYITEEGQLFTRQCADNPVSNPCLFEYVYFARPDSFIDKISVYSAR
                     VNMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRT
                     FIMPGQQLRRKSVRRKLNANRAEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVY
                     LASAAPEIRFPNVYGIDMPSATELIAHGREVDEIRQIIGADGLIFQDLNDLIDAVRAE
                     NPDIQQFECSVFNGVYVTKDVDQDYLDFLDTLRNDDAKAVQRQNEVENLEMHNEG"
     gene            complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JN001_001606"
     CDS             complement(7062..7550)
                     /gene="cvpA"
                     /locus_tag="JN001_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="colicin V production protein"
                     /protein_id="HAY9052872.1"
                     /translation="MVWIDYAIIAVIAFSSLVSLIRGFVREALSLVTWGCAFFVASHY
                     YTYLSVWFTGFEDELVRNGIAIAVLFIATLIVGAIVNFVIGQLVEKTGLSGTDRVLGV
                     CFGALRGVLIVAAILFFLDSFTGVSKSEDWSKSQLIPQFSFIIRWFFDYLQSSSSFLP
                     RA"
     gene            complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JN001_001607"
     CDS             complement(7809..8471)
                     /gene="dedD"
                     /locus_tag="JN001_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416817.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein DedD"
                     /protein_id="HAY9052873.1"
                     /translation="MASKFQNRLVGTIVLVALGVIVLPGLLDGQKKHYQDEFAAIPLV
                     PKAGDRDEPDMMPAATQALPTQPPEGAAEEVRAGDAAAPSLDPATIAANNTEFEPEPA
                     PVAPPKPKPVEPPKPKVEAPPAPKPEPKPVVEEKAAPTGKAYVVQLGALKNADKVNEI
                     VGKLRGAGYRVYTSPSTPVQGKITRILVGPDASKDKLKGSLGELKQLSGLSGVVMGYT
                     PN"
     gene            complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JN001_001608"
     CDS             complement(8461..9729)
                     /gene="folC"
                     /locus_tag="JN001_001608"
                     /EC_number="6.3.2.12"
                     /EC_number="6.3.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tetrahydrofolate
                     synthase/dihydrofolate synthase"
                     /protein_id="HAY9052874.1"
                     /translation="MIIKRTPQAASPLASWLSYLENLHSKTIDLGLERVSQVAARLGV
                     LKPAPFVFTVAGTNGKGTTCRTLESILMAAGYKVGVYSSPHLVRYTERVRVQGQELPE
                     SAHTASFAEIESARGDISLTYFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVD
                     ADVAVVTSIALDHTDWLGPDRESIGREKAGIFRSAKPAIVGEPEMPSTIADVAQEKGA
                     LLQRRGVEWNYSVTDHDWAFSDAHGTLENLPLPLVPQPNAATALAALRASGLEVSENA
                     IRDGIASAILPGRFQIVSESPRVIFDVAHNPHAAEYLTGRMKALPKNGRVLAVIGMLH
                     DKDIAGTLAWLKSVVDDWYCAPLEGPRGATAEQLLEHLGNGKSFDSVAQAWDAAMADA
                     KAEDTVLVCGSFHTVAHVMEVIDARRSGGK"
     gene            complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JN001_001609"
     CDS             complement(9799..10713)
                     /gene="accD"
                     /locus_tag="JN001_001609"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HAY9052875.1"
                     /translation="MSWIERIKSNITPTRKASIPEGVWTKCDSCGQVLYRAELERNLE
                     VCPKCDHHMRMTARNRLHSLLDEGSLVEMGSELEPKDVLKFRDSKKYKDRLASAQKET
                     GEKDALVVMKGTLYGMPVVAAAFEFAFMGGSMGSVVGARFVRAVEQALEDNCPLICFS
                     ASGGARMQEALMSLMQMAKTSAALAKMQERGLPYISVLTDPTMGGVSASFAMLGDLNI
                     AEPKALIGFAGPRVIEQTVREKLPLGFQRSEFLIEKGAIDMIVRRPEMRLKLASILAK
                     LMNLSAPNPEAPREGVVVPPVPDQEPEA"
     gene            complement(10869..11528)
                     /locus_tag="JN001_001610"
     CDS             complement(10869..11528)
                     /locus_tag="JN001_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9052876.1"
                     /translation="MDLIYFLIDFILHIDVHLAELVAEYGVWVYAILFLILFCETGLV
                     VTPFLPGDSLLFVAGALASLETNDLNVHMMVVLMLIAAIVGDAVNYTIGRLFGDKLFS
                     NPDSKIFRCSYLDKTHQFYERHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
                     VIGALLWVLIFTYAGYFFGMLPFIQSNLKLMIVGIIFVSILPGVFEFIRHKRAAARAA
                     K"
     gene            complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JN001_001611"
     CDS             complement(11611..12423)
                     /gene="truA"
                     /locus_tag="JN001_001611"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HAY9052877.1"
                     /translation="MSDQQQLPVYKIALGIEYDGSKYYGWQRQNEVRSVQEKLEKALS
                     QVANEPITVFCAGRTDAGVHGTGQVVHFETTAPRKDAAWTLGVNANLPDDIAVRWVKA
                     VPDDFHARFSATARRYRYIIYNHRLRPAVLSKGVTHFYEPLDAERMHRAAQCLLGEND
                     FTSFRAVQCQSRTPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLMEVGAHN
                     QPESWIAELLAAKDRTLAAATAKAEGLYLVAVDYPDRYDLPKPPMGPLFLAD"
     gene            complement(12423..13436)
                     /locus_tag="JN001_001612"
     CDS             complement(12423..13436)
                     /locus_tag="JN001_001612"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY9052878.1"
                     /translation="MSEGWNIAVLGATGAVGEALLETLAERQFPVGEIYALARNESAG
                     EQLRFGGKTITVQDAAEFDWTQAQLAFFVAGKEATAAWVEEATNSGCLVIDSSGLFAL
                     EPDVPLVVPEVNPFVLTDYRNRNVIAVPDSLTSQLLAALKPLIDQGGLSRISVTSLIS
                     ASAQGKKAVDALAGQSAKLLNGIPIDEEDFFGRQLAFNMLPLLPDSEGSVREERRIVD
                     EVRKILQDEGLMISASVVQAPVFYGHAQMVNFEALRPLAAEEARDAFAQGEDIVLSEE
                     NEFPTQVGDASGTPHLSVGCVRNDYGMPEQVQFWSVADNVRFGGALMAVKIAEKLVQE
                     YLY"
     gene            complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JN001_001613"
     CDS             complement(13502..14638)
                     /gene="pdxB"
                     /locus_tag="JN001_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-phosphoerythronate dehydrogenase PdxB"
                     /protein_id="HAY9052879.1"
                     /translation="MKILVDENMPYARDLFSRLGEVTAVPGRPIAVAQLADADALMVR
                     SVTKVNESLLAGKPIKFVGTATAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSS
                     LLMLAERDGFSLHDRTVGIVGVGNVGRRLQARLEALGIKTLLCDPPRADRGDEGDFRS
                     LDELVQHADILTFHTPLFKDGPYKTLHLADEKLIRSLKPGAILINACRGAVVDNTALL
                     TCLNEGQKLSVVLDVWEGEPELNVELLTKVDIGTPHIAGYTLEGKARGTTQVFEAYSK
                     FIGHEQHVALDTLLPAPEFGRITLHGPLDQPTLKRLVHLVYDVRRDDAPLRKVAGIPG
                     EFDKLRKNYLERREWSSLYVICDDASAASLLCKLGFNAVHHPAR"
     gene            14737..15732
                     /locus_tag="JN001_001614"
     CDS             14737..15732
                     /locus_tag="JN001_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis regulator Flk"
                     /protein_id="HAY9052880.1"
                     /translation="MIQPISGPPPGQPPGQGDNLPSGAGNQPLSSQQRTSLESLMTKV
                     TSLTQQQRAELWAGIRHDIGLSGDSPLLSRHFPAAEHNLAQRLLAAQKSHSARQLLAQ
                     LGEYLRLGNNRQAVTDYIRHNFGQTPLNQLSPEQLKTILTLLQEGKMVIPQPQQREAT
                     DRPLLPAEHNALKQLVTKLAAATGEPSKQIWQSMLELSGVKDGELIPAKLFNHLVTWL
                     QARQTLSQQNTPTLESLQMALKQPLDASELAALSAYIQQKYGLSAQSSLSSAQAEDIL
                     NQLYQRRVKGIDPRDMQPLLNPFPPMMDTLQNMATRPALWILLVAIILMLVWLVR"
     gene            complement(15729..16907)
                     /locus_tag="JN001_001615"
     CDS             complement(15729..16907)
                     /locus_tag="JN001_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9052881.1"
                     /translation="MTAVSQTETRSSANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHH
                     DLGYGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGGALLLAA
                     ILPVSAPLKFALLVVGRLILGFGESQLLTGALTWGLGIVGAKHSGKVMSWNGMAIYGA
                     LAVGAPLGLLIHSHYGFAALAITTMVLPLLAWACNGTVRKVPALAGERPSLWSVVGLI
                     WKPGLGLALQGVGFAVIGTFVSLYFASKGWAMAGFTLTAFGGAFVVMRVMFGWMPDRF
                     GGVKVAIVSLLVETVGLLLLWQAPGAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQ
                     VRGTALGGYAAFQDIALGVSGPLAGMLATTFGYSSVFLAGAISAVLGIIVTILSFRRG
                     "
     gene            complement(17200..18420)
                     /gene="fabB"
                     /locus_tag="JN001_001616"
     CDS             complement(17200..18420)
                     /gene="fabB"
                     /locus_tag="JN001_001616"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HAY9052882.1"
                     /translation="MKRAVITGLGIVSSIGNNQQEVLASLREGRSGITFSQELKDSGM
                     RSHVWGNVKLDTTGLIDRKVVRFMSDASIYAFLSMEQAIADAGLSPEAYQNNPRVGLI
                     AGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSIS
                     SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACEFDAMGALSTKYNDTPEKA
                     SRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYGATSDGADMVAPSGEG
                     AVRCMKMAMHGVDTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHS
                     LGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRELTTVMSNSFGF
                     GGTNATLVMRKLKD"
     gene            18579..20585
                     /gene="mnmC"
                     /locus_tag="JN001_001617"
     CDS             18579..20585
                     /gene="mnmC"
                     /locus_tag="JN001_001617"
                     /EC_number="1.5.-.-"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416827.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA
                     (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase
                     MnmD/FAD-dependent
                     5-carboxymethylaminomethyl-2-thiouridine(34)
                     oxidoreductase MnmC"
                     /protein_id="HAY9052883.1"
                     /translation="MKHYSIQPANLEFNAEGTPVSRDFDDVYFSNDNGLEETRYVFLG
                     GNQLEVRFPEHPHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK
                     FPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCHRLLLDEGRVTLDLWFGDINEL
                     TSQQDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFTSAGFVRR
                     GLQDAGFTMQKRKGFGRKREMLCGVMEQTLPLPCSAPWFNRTGSSKREAAIIGGGIAC
                     ALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFAR
                     RFYDQLPVKFDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVA
                     TNCSGITYPQGGWLCPAELTRNVLELAQQQGLQIYYQYQLQNLSRKDDCWLLNFAGDQ
                     QATHSVVVLANGHQISRFSQTSTLPVYSVAGQVSHIPTTPELAELKQVLCYDGYLTPQ
                     NPANQHHCIGASYHRGSEDTAYSEDDQQQNRQRLIDCFPQAQWAKEVDVSDKEARCGV
                     RCATRDHLPMVGNVPDYEATLVEYASLAEQKDEAVSAPVFDDLFMFAALGSRGLCSAP
                     LCAEILAAQMSDEPIPMDASTLAALNPNRLWVRKLLKGKAVKAG"
     gene            complement(20706..20984)
                     /locus_tag="JN001_001618"
     CDS             complement(20706..20984)
                     /locus_tag="JN001_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfcL family protein"
                     /protein_id="HAY9052884.1"
                     /translation="MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELES
                     GDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTDMWENLFQQASQQ"
     gene            complement(21018..21566)
                     /locus_tag="JN001_001619"
     CDS             complement(21018..21566)
                     /locus_tag="JN001_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P hydroxylase"
                     /protein_id="HAY9052885.1"
                     /translation="MNSTHHYEQLIEIFNSCFADEFNTRLIKGDDEPIYLPADAEVPY
                     NRIVFAHGFYASAIHEISHWCIAGKARRELVDFGYWYCPDGRDAQTQSQFEDVEVKPQ
                     ALDWLFCVAAGYPFNVSCDNLEGDFEPDRVVFQRRVHAQVMDYLTNGIPERPARFIKA
                     LQNYYHTPELTAEQFPWPEALN"
     gene            complement(21566..22375)
                     /locus_tag="JN001_001620"
     CDS             complement(21566..22375)
                     /locus_tag="JN001_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TSUP family transporter"
                     /protein_id="HAY9052886.1"
                     /translation="METFNSLFMVSPLLLGVLFFVAMLAGFIDSIAGGGGLLTIPALM
                     AAGMSPANALATNKLQACGGSISATIYFIRRKVVSLSDQKLNIAMTFAGSMSGALLVQ
                     YVQADVLRQILPILVICIGLYFLLMPKLGEEDRQRRMYGLPFALIAGGCVGFYDGFFG
                     PAAGSFYALAFVTLCGFNLAKATAHAKLLNATSNIGGLLLFILGGKVIWATGFVMLVG
                     QFLGARMGSRLVLSKGQKLIRPMIVIVSAVMSAKLLYDSHGQEILHWLGMN"
     gene            complement(22375..23199)
                     /gene="mepA"
                     /locus_tag="JN001_001621"
     CDS             complement(22375..23199)
                     /gene="mepA"
                     /locus_tag="JN001_001621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HAY9052887.1"
                     /translation="MNKTAIALLALLASSASLAATPWQKITQPVPGSAQSIGSFSNGC
                     IVGADTLPIQSEHYQVMRTDQRRYFGHPDLVMFIQRLSSQVSNLGMGTVLIGDMGMPA
                     GGRFNGGHASHQTGLDVDIFLQLPKTRWTSAQLLRPQALDLVSRDGKHVVSTLWKPEI
                     FSLIKLAAQDKDVTRIFVNPAIKQQLCLDAGTDRDWLRKVRPWFQHRAHMHVRLRCPA
                     DSLECEDQPLPPPGDGCGAELQSWFAPPKPGTTKPEKKTPPPLPPSCQALLDEHVI"
     gene            complement(23203..24288)
                     /gene="aroC"
                     /locus_tag="JN001_001622"
     CDS             complement(23203..24288)
                     /gene="aroC"
                     /locus_tag="JN001_001622"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HAY9052888.1"
                     /translation="MAGNTIGQLFRVTTFGESHGLALGCIVDGVPPGILLTEADLQHD
                     LDRRRPGTSRYTTQRREPDQVKILSGVFEGVTTGTSIGLLIENTDQRSQDYSAIKDVF
                     RPGHADYTYEQKYGLRDYRGGGRSSARETAMRVAAGAIAKKYLAEKFGIEIRGCLTQM
                     GDIPLEIKDWSLVEQNPFFCPDPDKIDALDELMRALKKEGDSIGAKVTVVASGVPAGL
                     GEPVFDRLDADIAHALMSINAVKGVEIGDGFDVVALRGSQNRDEITKDGFQSNHAGGI
                     LGGISSGQQIIAHMALKPTSSITVPGRTINRFGEEVEMITKGRHDPCVGIRAVPIAEA
                     MLAIVLMDHLLRQRAQNADVKTDIPRW"
     gene            complement(24323..25255)
                     /gene="prmB"
                     /locus_tag="JN001_001623"
     CDS             complement(24323..25255)
                     /gene="prmB"
                     /locus_tag="JN001_001623"
                     /EC_number="2.1.1.298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3 N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY9052889.1"
                     /translation="MDKIFVDEAVNELQTIQDMLRWSVSRFSAANIWYGHGTDNPWDE
                     AVQLVLPSLYLPLDIPEDMRTARLTSSEKHRIVERVIRRVNERIPVAYLTNKAWFCGH
                     EFYVDERVLVPRSPIGELINNKFAGLISKQPQHILDMCTGSGCIAIACAYAFPDAEVD
                     AVDISPDALAVAEQNIEEHGLIHNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSD
                     LPNEYRHEPELGLASGTDGLKLTRRILGNAADYLADDGVLICEVGNSMVHLMEQYPDV
                     PFTWLEFDNGGDGVFMLTKEQLLAAREYFAIYKD"
     gene            25421..25972
                     /gene="smrB"
                     /locus_tag="JN001_001624"
     CDS             25421..25972
                     /gene="smrB"
                     /locus_tag="JN001_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease SmrB"
                     /protein_id="HAY9052890.1"
                     /translation="MKKKTTLSEEDQALFRQLMAGTRKIKQDTIVHRPQRKKISEVPV
                     KRLIQEQADASHYFSDEFQPLLNTEGPVKYVRPDVSHFEAKKLRRGDYSPELFLDLHG
                     LTQLQAKQELGALIAACRREHVFCACVMHGHGKHILKQQTPLWLAQHPHVMAFHQAPK
                     EYGGDAALLVLIEVEEWLPPELP"
     gene            complement(26045..26758)
                     /locus_tag="JN001_001625"
     CDS             complement(26045..26758)
                     /locus_tag="JN001_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005007603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2544 domain-containing protein"
                     /protein_id="HAY9052891.1"
                     /translation="MATPDSVNYAIFKATFMPNSQPDLVSWTGDSSTQPSMSKISDSR
                     VSMSACPGLEQYDSQTKTGWTCNELKMFVYYDGNLHGCPWIVSSFVKSRDPFAKTYDD
                     DFPDYIGPTKVSSSCPAVPLAPYDVSWNENYVVHNKVVRLQSTGGVIEQTLPTFLMEN
                     GKLCNGNNFDERGVYCRFIAQQMTFSTSGCDNAKVTVTPEPQPITSRQLHDMKLRVDT
                     TSRQPIDSTCRFTYILNMY"
BASE COUNT         6602 a         7320 c         6758 g         6099 t
ORIGIN      
        1 gcatcaagat ggttttgcat tgccgcaatg gaataacgca tcatgcgaaa agccattaat
       61 tcttccggct tactttggtg ctctatcact acataaatat aacccactcc ctcctgcgtt
      121 ttcacagacc acaagaggtc ggaataatat tgccgcaggt cttcatcaat aaaactgttt
      181 ggttccagtt taagcgtcgt taaatcacac agtttgcgca gcggcgcggg aagatgaata
      241 tcaataaaat cccgcgcggt gtctggatgg cgtaaaaaag atttaaatac cgcatcatgc
      301 ggcgtggaag ttgtcgatat tgtcatggcg ttccgtcacc cctcaaattt aagatgacgc
      361 gacaataacc acgattaaca cccaatgcag caggcagttt ttatctttgg acagcgaatt
      421 cagaagtatt tttagcggac tgcaactttt acatttcagc ggaagctgac tcgcaaattc
      481 cccatgaaaa tactccggca gcgttagcca ccggagagga aattatttca gcgatccctt
      541 aaggaactgt tgcagacgag ggctttgcgg gttgccaaat aactgctccg gcgcgccctc
      601 ttcttctatt ttcccctgat ggaggaaaat gacatgagta gaaacatggc gagcaaagcc
      661 catttcgtga gtcactacca ccatggtttt cccctcttct gccagttgct gcataatacg
      721 caacacttcg cctaccagtt caggatcgag cgccgaggta ggttcatcaa acagtaaaac
      781 ttccggttcc atcgccagcg cccgcgcgat agaaacacgc tgttgctgac cgccggaaag
      841 atgcaccgga tatttcccct gcgcacgttc gtctatcccg acttttgcca gatacttgac
      901 cgcccgctcg tgcgcttcct gcttgctcag gcccaacacc tgaatcggcg cttccatgac
      961 gttttccagc accgtcatat ggctccagag attgaagtgc tggaatacca tcgtcaggcg
     1021 tgtgcgcagt aagcgcagtt gatttttatc ggcgactttg agttgaccgt ctttgtcgcg
     1081 caccagattg atcgtctggc cattgaccac gatcgaccct tcactcggtt tttcgaggaa
     1141 gttaatgcag cgcagaaagg tacttttccc cgatcccgac gatccgatga tgcttattac
     1201 atctccggca ttcgcttgca gtgagacccc tttcagcact tcatgttcgc cgtagcgttt
     1261 gtgcaaatcg ataacgttta atttattctc ggacatcgta ttctcagtgc gttgaagaag
     1321 gtttcacatg ctgcaaccag cgtttttccg ctctgcgaaa gaggctgatc aggacataag
     1381 agatgattaa atagagcacc gcggcaatgc cgaaggcggt aaaaggttga tacgtggcgg
     1441 cgttaatatc gcgggctatt ttcagcagat ccggcacagt ggccgtaaac gccagcgcag
     1501 tagagtgcag catcaggatc acttcgttgc tgtatgccgg taacgcaata cgcagcgcag
     1561 aaggcaaaat aatgcaacga tacattttaa aagtcgagaa gccataggct ctggcggctt
     1621 caatttcccc atgcagaacc gaacggattg ccccagcaaa aatctcggta gtgtaagcgc
     1681 aggtgttaag cgtcagcgcc agcacggtac agttcaggcc actgcggaag aaagcgttaa
     1741 ggaattcggt tcccttaaca atctcaagcg tgtatatgcc ggaatagaac accagcaact
     1801 gaacatacag cggcgtaccg cgaaaaatat aggtaaataa ccagattgga aactggatgt
     1861 atttattact ggagacacga ccaatcgcca gaaacagcgc caggactccg cctatcacta
     1921 ccgacaaaat aagcagccac agagtgatcg ccacaccagt aaagcgataa ccgtcggtcc
     1981 acagcagcgg tttccagtat tcatgtaaga tttcgatcac aggtcagccc tcttcacacc
     2041 cacggagtag cggcgctcaa ggaacagcag cacaccattg gaaacagtgg tgaaaaccag
     2101 gtaaatcacg ccacagacga tggcgaaata gaacggttcc caggtacttt tgcctgccag
     2161 ttgggtggct ttgaccacat cttccaggcc gagtaacgaa accagtgcgg tagatttgag
     2221 gatcacctgc cagttgttgc caatgcctgg cagggcgtaa cgcatcatcg ccggaaacat
     2281 gatccgccga aacacttgcc cacgagtaaa accgaacgcc gtcgccgcct ctatatgtcc
     2341 tttcggcact gccataaaag caccacggaa cgtttcggta aaataagcac cgtagataaa
     2401 accgagagtg ataataccag cgaccatcgg atcgatatca atctgcccga cgcccatcgc
     2461 ctccgtcacc gtgtttagcg caatctgcaa accgaagaaa atcagcagca tcaacactaa
     2521 gtccggcacg ccacgaatca gcgtggtgta cccttcgaaa atcagccccg aaagccgatt
     2581 ttgcgagagc ttaccgccag cgccaattaa accgatgatt acagcgagca ctacagagct
     2641 gatagccagc tccagcgtga cgagcgcccc ctgtaaaata acacctgaaa acccatataa
     2701 catgctgcct gtcctgtcgt gtgtggtgaa ttaccgcctc ttgtctccct ccggttaccc
     2761 gaagggagcg ggctttcttt caccgatggc gattagccac cataaacatc aaaatcgaag
     2821 tactttttcg ctaatttctc gtaagtaccg tcagcgcgca tttcggcaaa ggctttgttc
     2881 agtgcttcgc gcagttcgtt atcttcttta cgcaggccca tgccggtccc tacgccaaac
     2941 agtttttcat ctttaacaga cgggccaccg aatttgtaat ctttaccgac aggttgtttg
     3001 aggaaacctt cgctggcagc gacctcatcc tggaacgcgg catcaatacg tccggcagtc
     3061 aggtcagaat aaatgttgtc ctgcccctga tacgagacga tttcaatgcc ttttggtgcc
     3121 caatgttcat taccgaacgt ctcctgggtg gtgccctgca atacgcctac ccgtttgcct
     3181 ttcagcgact cgactgtcgg ctgaatgtca gaatttttcg ccaccaccaa acgagaatcg
     3241 gcagcgtaca gtttgtcggt gaaggctatt tcttgctgac gtttttccgt aatggaaagc
     3301 gatgacatga tggcgtcaat cttcttcgct tttaaggacg ggattaacgc atccagcgga
     3361 ttttcgacaa acgtacattg cgtattgatg cgtttgcata attcctttgc cagatcgata
     3421 tcgaagccaa ccagttcgcc ttgtgaattt tttgattcaa atggcgcata ggtcgggtcg
     3481 gtaccgatgc ggatgttttg cggaatcgca gcaaatgccg cagttgcgct ggagaaggcc
     3541 agaaccagag agagcgatag caccagtttt ttcataatgt cctcaactga cagtcttttt
     3601 atagggaata tttacaggtt tgttacactt atcgtgccat aaaattgacc atcaaggcaa
     3661 aatatcccgc cccgttagat gtattatttt tcattaaaaa tgcttaagta tgcatttcaa
     3721 tgcaccacga tagtgcaaca aacctagcgt gcaccatgat gatcattcca tcaggtacag
     3781 cttcccagcg acgtatcagt caccgtagac attaaagtcg aaatactttt tcgccatctt
     3841 gtcgtaggtg ccgtcctgac gcagctcgcc aagcgcctta ttgaaggcag ccgtcagttc
     3901 agcatcatct ttacgtagcc ctacaccggt gccatcaccg aagtattttt tgtcttttac
     3961 tgatgagcca gcaaaggcga aatctttacc agcaggttgc ttgaggaatc cttcgctggc
     4021 agcaacttca tcttgtaacg cagcatccag acgtcctgca gccagatcgg aatagaccaa
     4081 atcctggttg gcataggcca ccacatccac gcctttgcta cgccaggtct cgttagcgta
     4141 agcttcctgg gttgatccct gcagcacacc aacatgttta cctttcagtg aatccagcgt
     4201 tggctgaatc ggtgaacctt tggcagcaat caaacgagaa tctgcggcgt acagcttgtc
     4261 ggagaaggca atctcctgct gacgtttatc ggtaatggaa agcgacgaaa taatggcgtc
     4321 gatttttttc gctttcagtg aggggatcag cgcgtcaaag tcactggcaa cccaggtaca
     4381 tttcacctgc atccgtttgc acatctcgtt accgagatcg atatcaaagc caacaaaatc
     4441 acctttagca tctttcgacg agaacggcgc ataggtggta tcggttccga tacgtaccgt
     4501 ctccggtagc gccgcatagc tggaagccgc tgcggagaga ccgactaaca aagacagagc
     4561 gagaatcgac ttcttcatac ataaccctca agtgaaaatg gcttttttat gttgtgtatt
     4621 gtgttgtgtg tttgcaggct ctttcatgca ggtcttatgc catcttgacg acaacagtaa
     4681 cattcaacgt taaatatgtt aataagacgt tgcattattg tcctgaagtt gaagatagca
     4741 ggtatagcgg ttgaatcgca gcgtttcgat tgaatggcag aaacaaaatg tcgaggattt
     4801 gatcgcggtt gcaaaattgc cctgaaacag ggcaacagcg gagttatgcg ccctgccagc
     4861 gggcaaagag atcttcagga agggttattg caaactggtc aagaacacga ttaaccgtct
     4921 gatttatcac atcatcaagg gattgcgggc gatgataaaa cgccggaaca ggaggcataa
     4981 tcaccgcacc gatttctgcc gcctgagtca ttaaacgcag atggcctaag tgcaatggtg
     5041 tttcacgcac gcagagcacc aacgggcgac gctctttcag caccacatct gccgcacggg
     5101 tcagtaagcc atcagtatag ctatggacaa tgccggaaag ggttttgatt gaacagggta
     5161 aaatcaccat ccccagcgtc tggaaagaac cggaagagat gctggcggaa atatcgcgcg
     5221 catcgtgcgt gacatcagct aatgcctgca cttcgcgcag ggaaaaatcc gtttcgaggg
     5281 ataaggtctg gcgcgccgcc tggctcatca ccagatgcgt ttcgatatct gtgacatcgc
     5341 gcagaacctg taataagcgc acgccataaa tcgcgccgct ggcaccgctg atgcctacaa
     5401 tgagtcgttt cataaatagt tgccctgtca gacttgcagg cagactttgc agtatttcgg
     5461 cgggagttgc aagtcagggt gccagaccgg caccctcagc gaaggcatca tccttcgtta
     5521 tgcatttcga gattttccac ttcgttctga cgttgcactg ctttggcgtc atcattacgt
     5581 aacgtatcga ggaaatcgag gtagtcctga tcaacatctt tggtgacgta gacgccgttg
     5641 aacaccgagc attcaaactg ctggatatcc ggattttcag cgcgaacggc gtcgatcaga
     5701 tcgttcagat cctggaaaat caacccgtca gcaccgatga tctggcgaat ttcatcaact
     5761 tcgcgaccgt gagcgatcag ttccgtggcg ctcggcatat caataccata aacgttcggg
     5821 aagcgaattt ccggggccgc agaagcgagg tacactttct tcgctccggc ttcgcgtgcc
     5881 atctcgataa tctgctcaga agtggtgcca cggacgatgg agtcgtcgac cagcaggacg
     5941 tttttatcgc ggaactcggc gcggttggcg ttcagtttac ggcgcacgga cttacgacgc
     6001 agctgctggc ccggcatgat gaaggtgcgg ccaacatagc ggtttttaac gaagccctgg
     6061 cggtacggct tgcccagaat acgagcaatt tccagcgcga tatcacacga ggtttccggg
     6121 atcgggatca ccacgtcgat atccagatct tcccattcgc gggcaatttt ctcacccagt
     6181 ttcgtgccca tattcacacg cgcgctgtaa acggaaattt tgtcgataaa cgagtccggg
     6241 cgggcaaagt atacatactc aaacaggcac ggattgctga ccggattgtc agcacattga
     6301 cgggtaaaca actgcccttc ttcagtgatg taaatcgctt cgcccggcgc gacgtcacgc
     6361 aggaaatcaa agcccagcgt atcgagcgct acgctttcgg aagcgaccat atattctgta
     6421 cggttctcgt caatatcacg ttttcccagt accagcggac gaatcccgtt tggatcgcgg
     6481 aaagcaacca taccgtggcc gataatcatc gccacacagg catatgcgcc gcggattaag
     6541 cggtttgtgg cagcaatggc agcgaaaata ttgtcggctt ccagcgggta gtggcggaag
     6601 ttgtccagct cgctagcgaa gatattaagc agaatttccg agtcggaagt ggtgttgatg
     6661 tggcggcgtt tttcttcaaa cagtttttta cgcaactcgt gagcgttggt cagattgccg
     6721 ttgtgggcaa gcgtaatgcc atacggggag ttaacgtaaa acggctgcgc ttcagaggcg
     6781 ctggagctgc cagccgtagg gtaacgcaca tgaccaatgc ccatattgcc ctgcaaacgc
     6841 tgcatatggc gagcttcaaa tacatcgctc accagcccgt tcgctttacg caaacggaag
     6901 cagttattgg catctatggt gatgatgccg gcggcatcct gaccgcgatg ctgaagcacc
     6961 gttaaggcat cataaatcga ctggttaacc ggcataacac cggcgatacc gacaataccg
     7021 cacatacgtc tttttcctcg ttaagccaca tctcagagca cttacgctct gggcaagaaa
     7081 cttgacgagc tttgcagata atcaaaaaac catctgatga taaaactgaa ctgcgggatc
     7141 agctgtgatt tgctccagtc ttcgcttttc gacaccccgg taaaggagtc gagaaagaag
     7201 agaatggcgg caacaatcaa cacaccgcgc aacgcaccga aacagacgcc cagcacccga
     7261 tcggtgcctg acaaccccgt tttctccacc aactggccta tcacgaagtt cacgatagca
     7321 ccaacgatca gggtagcgat aaacagtacc gcgatggcaa ttccatttcg aaccagttcg
     7381 tcttcaaagc ccgtaaacca gactgacagg taagtgtagt aatgactggc aacaaagaaa
     7441 gcacaacccc atgtcaccag cgataacgct tcacgaacaa agccgcggat caggctaacc
     7501 agagaggaaa aagcaatcac cgcgattatg gcgtaatcaa tccagaccat atgtgtccca
     7561 cgattttacg ccctgtcatc ctgttcgggg cgcattctaa cagaaaaaga aaacgtttgc
     7621 gtagggattt ccttcccacg catcaataaa aatggcgctg aaaaaatatt caacgccatc
     7681 gactttttat gcctttgcgg catcgtgcaa tgcgtgtcgg atgcggcgta aacgccttat
     7741 ccgacctacg gttctaacac tgcccaagcc tgataagacg cgccagcgtc gcatcaggca
     7801 agactgtatt aattcggcgt atagcccatt accacgccac ttaagccaga aagttgcttc
     7861 aactcaccca gcgaaccttt cagcttatct ttcgaggcat ccggcccaac cagaatacgg
     7921 gtaattttac cctgcactgg cgtggatggc gacgtataaa cccgataacc ggcaccgcgc
     7981 agcttaccga caatctcatt cactttatcg gcatttttca gcgcacccag ttgcacaaca
     8041 taggctttac ccgttggcgc tgctttttct tccacgaccg gcttcggttc tggcttcggc
     8101 gcaggtggtg cttcaacctt cggtttaggc ggctccaccg gtttcggctt cggtggggcg
     8161 accggtgcag gttccggttc aaactcggtg ttattggctg caatagtggc cggatcgagc
     8221 gacggtgctg cggcatcacc tgcccgcacc tcttccgctg cgccttccgg cggctgcgtc
     8281 ggcaacgcct gggtggcggc tggcatcata tcaggctcat cgcgatcgcc cgcttttgga
     8341 accagcggga tagccgcaaa ctcatcctga taatgttttt tctgcccgtc cagcagccct
     8401 ggaagtacaa tcacccccag cgccaccagc acgatcgtgc ccactaaccg attctgaaac
     8461 ttacttgcca ccgcttctcc tcgcgtcaat cacttccatg acatgtgcga ccgtgtggaa
     8521 agaaccacac accagcacgg tgtcttccgc tttagcgtcc gccattgcgg catcccatgc
     8581 ctgcgcaacg ctatcaaatg atttgccgtt acccaaatgc tcaagcagtt gttctgccgt
     8641 ggcaccgcgc ggcccttcca gtggcgcaca ataccagtca tcaaccacgc ttttcaacca
     8701 ggccagagtt ccggcaatat ctttatcatg tagcataccg ataaccgcca gcacgcgccc
     8761 gtttttcggt agcgctttca tacgcccggt gagatattcc gccgcatgtg gattatgcgc
     8821 gacatcaaaa ataacgcgtg gcgactcgct cacaatctgg aaacgtcccg gcaaaattgc
     8881 gctggcaatc ccgtcgcgaa tggcattttc actgacttcc agcccgctgg cacgcagtgc
     8941 cgccagcgct gttgcggcat tcggttgcgg gacaagcggc aacggcagat tttccagcgt
     9001 gccgtgagca tcgctaaacg cccagtcatg atcggtgacg gaatagttcc actcaacgcc
     9061 ccgacgttgt aacagtgcac ctttttcctg cgccacatca gcaatggtag aaggcatttc
     9121 cggctcaccg acaattgccg gttttgcgct gcgaaagatg cctgctttct cgcgaccaat
     9181 actttcgcga tctggcccca gccagtcggt atgatccagc gcaatactgg ttactaccgc
     9241 gacatcggca tcgacaatat tggttgcgtc cagacgaccg cccagcccta cttccagaat
     9301 caccacgtca agttgtgcct gtttgaacag ccacaacgcc gacagcgtac cgtactcgaa
     9361 ataggtcagg gaaatatcac cgcgtgccga ttcaatctcc gcaaaagagg cggtgtgggc
     9421 cgattccggc aattcctgcc cctgcacacg tacgcgctcg gtataacgca ccagatgcgg
     9481 cgaactgtag acgcccactt tgtaccctgc cgccatcaga atcgactcca gcgtacggca
     9541 ggtggtgcct ttgccattcg tacccgcaac ggtaaacaca aatggcgctg gtttcagaac
     9601 gccaagacga gccgcgacct ggctcacgcg ctcaaggccg agatcgatag ttttactgtg
     9661 caggttttcc agataagaaa gccacgaagc cagaggcgac gcggcttgag gagtgcgttt
     9721 gataatcatg gtatccgctg attcgttacg gtgagaatag caaaagggca gagccagtgg
     9781 ccctgccctt atcagttatc aggcctcagg ttcctgatcc ggtaccgggg gtaccactac
     9841 gccttcacgc ggcgcttcag gattcggcgc tgacagattc atcaacttcg ccagaatgct
     9901 cgccagtttc aggcgcattt ccggacgacg gacgatcatg tcgatcgcgc ctttctcgat
     9961 caggaattca ctgcgctgga atcctagcgg cagtttttcg cgaacggtct gttcgataac
    10021 acgcggaccg gcaaagccaa ttaacgcttt cggttcagcg atgttgagat cgcccagcat
    10081 ggcgaaactt gcagaaacac cgcccatcgt cgggtcggtc agcacggaga tgtacggcaa
    10141 gccgcgctcc tgcatttttg ccagtgccgc agaggttttc gccatctgca tcagcgacat
    10201 cagtgcttcc tgcatacgtg cgccaccaga ggcggagaag cagatcagcg ggcagttatc
    10261 ttccagcgcc tgctcaacgg cacgcacgaa acgtgcaccc acaacagacc ccattgaacc
    10321 gcccataaag gcgaactcga atgccgcagc gacaaccggc attccataca gagtgccttt
    10381 catcaccacc agcgcatctt tttcgccggt ttctttctgc gcagaagcca gacggtcttt
    10441 atacttcttg gagtcacgaa acttcagcac atctttcggc tcaagctcgc tacccatctc
    10501 cacaaggctt ccttcatcta acaggctatg caggcgatta cgcgctgtca tacgcatgtg
    10561 atggtcacac ttcggacaga cctcaagatt acgttccagc tcagcgcggt ataaaacctg
    10621 accgcagcta tcacacttag tccacacccc ttcaggaatg ctcgccttgc gggtgggagt
    10681 aatgttgctt ttaattcgtt caatccagct cattagggac ctttctgtct gaacctggtt
    10741 cgatgccagt tttatctttg gggacgcata atgccatttt tgcccccaac agaccatgaa
    10801 tgttgcacat taaaacataa cagcccgaaa ctttggataa aaaagtggtc gaaccgcgga
    10861 gttacttttt attttgcggc gcgtgccgca gcgcgtttgt gacgaataaa ttcgaaaacc
    10921 ccaggcaata ttgaaacaaa aataatgcca acaatcatca gcttaaggtt gctctgaatg
    10981 aaggggagca tgccgaagaa ataacccgcg taggtaaaaa tcagtaccca caacagtgcg
    11041 ccgatcacgt tataagcggc gaaatgacgg tacgacatgt ggcccattcc cgcaacaaac
    11101 ggcgcgaacg ttctgacgat cggtacaaaa cgggcgagaa taatcgtttt gccgccatgt
    11161 ctctcgtaaa actgatgagt cttatcaaga taactgcaac gaaagatttt cgaatccggg
    11221 ttactgaaca gtttgtcacc aaataaccgt ccaatggtat agttcactgc atcaccgaca
    11281 atagcggcaa tcaacataag caccaccatc atatggacat tgagatcgtt agtttccagc
    11341 gacgccaatg caccagcaac aaacagcagc gaatcaccag gcaggaatgg cgttaccacc
    11401 agccccgttt cgcagaacag aatcaaaaac agaatggcat aaacccagac gccgtactcc
    11461 gcgaccagct ctgccagatg cacgtcaatg tgcaggataa aatcgatgag gaaataaatc
    11521 aggtccatat ttgcctatgc cttgtactcg tcatctttca ggctgtaact acgttggcta
    11581 cagcctgaaa tgttccgagc attattctcg ttagtccgcc agaaatagcg ggcccattgg
    11641 cggttttgga agatcatacc ggtcagggta atccaccgcg accagataca gcccttccgc
    11701 ttttgccgtt gctgccgcca gcgttctgtc ctttgccgcc agcaactctg ctatccagct
    11761 ctccggctgg ttgtgggcac cgacttccat caggctgccg acaatattcc tgaccatatg
    11821 atgtacaaag gcattcgctt tgatatctac caccacataa ggaccgtgac gcgtgacatt
    11881 aatatgcata acgttgcgcc acggggttcg ggactggcac tgcaccgcac ggaacgaggt
    11941 gaaatcattc tcgcccagca agcattgcgc agcccgatgc atccgttcag cgtccagcgg
    12001 ttcgtaaaaa tgggttaccc ctttactcag taccgccggg cgcagccgat gattgtagat
    12061 gatgtagcga taacggcgag ccgtggcgct aaatcgggca tgaaaatcat caggtacagc
    12121 tttaacccaa cgcacggcga tgtcatcagg taaattcgca tttacgccca aggtccacgc
    12181 cgcgtctttg cgcggcgcgg ttgtttcgaa atgcaccacc tgcccggtac cgtgtacccc
    12241 tgcgtcagta cgcccggcgc agaagacggt gatgggttcg ttcgccacct gggagagcgc
    12301 cttttccagc ttctcctgca cactgcggac ttcattctgc cgttgccagc cgtaatactt
    12361 actgccgtcg tactcaatgc ccagcgcaat tttataaact ggcagttgtt gctggtcgga
    12421 cattagtaca gatactcctg caccagtttc tcggcgattt ttactgccat cagcgcgccg
    12481 ccaaagcgaa cgttatcggc caccgaccag aactggactt gctccggcat accgtagtca
    12541 ttacgcacgc agccaacaga aagatgcgga gtacccgaag catcccctac ctgagtcggg
    12601 aattcgttct cttcagagag cacaatatct tcgccctgag caaacgcatc acgcgcttct
    12661 tctgccgcca gcggacgcag tgcttcaaag ttgaccatct gggcatgacc gtagaatacc
    12721 ggtgcctgga cgacgcttgc cgaaatcatc agcccttcgt cctgcaggat tttgcgtact
    12781 tcgtcaacga tacgacgttc ttcacgcacg ctaccttcgc tatccggcaa caacggcagc
    12841 atattgaacg ccagttgacg accgaagaaa tcttcttcgt caatcggaat gccgttgagc
    12901 aatttcgcac tctgccccgc taacgcatcg accgcttttt tgccctgggc ggaggctgaa
    12961 atcaggctgg taacactgat acgcgacaaa ccgccctgat cgattaacgg tttcagtgcc
    13021 gccagcagct ggctggtcag actgtctggt acggcgatga cattccggtt gcggtaatcg
    13081 gtcagtacaa acgggtttac ttccggcacc accagcggta cgtcgggttc gagagcaaac
    13141 agtccgctgc tgtcgatcac caggcaacct gagttggtcg cttcttcaac ccaggcagcg
    13201 gtagcttctt tgcctgcgac aaaaaatgcc agctgcgcct gcgtccagtc gaattcagcg
    13261 gcatcctgca cggtgattgt tttaccacca aagcgcagtt gttcgcctgc gctttcgtta
    13321 cgtgccagtg cataaatttc cccaaccggg aactgacgtt cagccagcgt ttcaagcagg
    13381 gcttcgccca cagcgccagt tgcgcccagg acggcaatgt tccagccttc agacatggtg
    13441 gtttactcca gaaatagcaa agctccctgc caatgttaca gcagagagca tgaagaagag
    13501 attaacgtgc cggatgatga acggcgttaa aacccagttt acacagcaat gatgccgcac
    13561 tggcgtcatc acaaattaca tacagagatg accattcacg gcgctcaaga tagtttttgc
    13621 gcagtttatc gaactcaccc ggtatcccgg cgactttacg cagcggtgcg tcatcgcggc
    13681 gcacatcata caccaaatgc accagccttt tcagcgtcgg ttgatcgagc gggccatgca
    13741 gcgtaatgcg accaaactct ggcgcgggca gtaatgtatc cagcgcaacg tgctgttcat
    13801 gcccaataaa cttgctataa gcttcaaaca cttgcgtagt accgcgtgct ttaccttcca
    13861 gggtataacc tgcgatatgc ggcgtgccga tatccacttt tgtcagcaac tccacgttaa
    13921 gttccggttc gccttcccag acatccagca ctacgcttaa cttctggcct tcattcaggc
    13981 aggtcagcaa cgcagtatta tcgacgactg cgccacggca ggcgttaatc agaatcgctc
    14041 ccggcttcag gctacggatc agtttttcat ccgccagatg cagcgttttg tacggcccat
    14101 ctttgaagag tggcgtatgg aaagtcagaa tatccgcatg ctgaactaat tcatccagcg
    14161 agcggaaatc accctcatcc ccacggtcag cgcgaggcgg atcgcaaagc aatgttttaa
    14221 tccctaacgc ttccagtcgc gcctgcaatc gacgtccaac gttaccaacg cccacgatcc
    14281 ccaccgtacg gtcgtgcagt gaaaatccat cgcgttcggc aagcatcagt agtgaggaga
    14341 aaacatattc caccaccgca atcgcattac agccaggtgc agcggaaaaa ccaattcccg
    14401 cctgcttcaa ccatgcttca tcgacatggt cggtccccgc agtggcagtg ccaacaaatt
    14461 taatgggttt tcctgccagc aaagattcat tcactttcgt gaccgaacgc accatcagcg
    14521 catccgcgtc tgccagttga gcgacggcga ttggacgccc gggaaccgcg gtcacctcac
    14581 ccaaacggct aaataagtcg cgggcataag gcatattttc atcaacaagg attttcacgt
    14641 ttgtgttacc tgtatgagac gagagttaac cggacaagtg tgccataatc tcgcggccag
    14701 gcatacttgc gaagatttca ggtataagga tacgtaatga tacaacctat ttccggccct
    14761 cctcctgggc aaccaccagg tcagggagat aacctgccgt ctggcgcggg caatcagcct
    14821 ttatccagtc agcaacgtac ttcgctggaa agcttaatga cgaaagtgac ctcactgacg
    14881 caacagcaaa gagcagaact gtgggcgggt atcaggcacg atattggtct gtcgggagat
    14941 tcaccgctgc tttcgcgtca cttccctgcc gctgagcata atctggcgca acgtctgctg
    15001 gccgcgcaaa aaagccattc tgcccgccag cttttagcgc aattagggga gtatttacgt
    15061 ctggggaata atcgtcaggc ggtcacggat tatatccgtc ataactttgg tcagacgccg
    15121 ctgaatcagc tctcaccgga gcaattaaaa accattctca ccctgttgca ggaagggaag
    15181 atggttattc cgcaaccgca gcagcgcgag gcgaccgacc gtcctttatt accggcggag
    15241 cacaatgcgc taaaacagct ggtgaccaaa cttgcggcgg caacggggga acccagcaaa
    15301 cagatctggc aatcgatgct ggaactttcc ggggtgaaag atggcgagtt aattccagcg
    15361 aaactgttta accatctggt gacctggcta caggcgcgtc agacgctaag ccagcaaaat
    15421 acgccgacgc tggaatcact acagatggcg ctaaaacaac ctttagatgc cagtgaactg
    15481 gcggcgttat cggcatatat ccagcaaaaa tatggccttt ctgcgcaatc atcgctttct
    15541 tctgcccagg ccgaggatat tcttaatcag ctttatcaac ggcgggttaa agggattgat
    15601 ccgcgtgata tgcaaccgct gcttaatcct tttccaccga tgatggacac gttgcaaaat
    15661 atggcaacgc gtcccgcgct gtggatactg ttagtcgcga ttatcctgat gctggtctgg
    15721 ctggttcgtt aaccccgacg aaatgacagt atcgtgacaa taatacccag caccgcagag
    15781 atcgccccgg caagaaatac cgaagagtaa ccaaacgtgg tcgccagcat tcccgccagc
    15841 ggcccggaga cgccgagggc gatatcctga aacgcggcgt aaccgcccag tgcggtgccg
    15901 cgaacttgtg aggggacgcg tttaaccacc tccacgccca gcgcaggaaa gataagcgaa
    15961 catccggctc cggttaacgc cgcgcccgct aatgcgaccc atgcacctgg ggcttgccag
    16021 agcagcaaca agcccaccgt ttctacaagc agagagacaa tcgccacttt cacgccgcca
    16081 aaacggtccg gcatccagcc aaacatgacg cgcatcacga caaatgcgcc gccaaacgcg
    16141 gtaagagtaa agcccgccat cgcccatcct ttgctggcaa agtagagcga aacgaaagtc
    16201 ccgataaccg caaaaccaac gccttgtagt gccagcccta accctggttt ccagataagc
    16261 ccgacaacgc tccacagcga tggacgttct cccgccaggg ccggtacttt gcgcactgtg
    16321 ccgttacagg cccacgccag taagggtaat accattgtgg tgatcgccag tgcggcaaaa
    16381 ccgtaatggc tatgaatcaa caggccaagc ggcgcaccaa cagcgagggc accgtaaatc
    16441 gccattccgt tccatgacat cactttgcca gagtgttttg cccctacgat gcctaatccc
    16501 caggtcagag cgcctgtcag taactggctt tcaccaaagc caagaatcaa acgcccgacg
    16561 accaacaggg caaatttcaa cggtgcggag acaggcaaaa tcgccgccag cagcaacgcg
    16621 ccgccagcca gaccacaagc taacatcccc tgaagcgccg aacgttttgc accatattga
    16681 tcggccagtc gcccggcata gccacgcgtc agcaccgtag ccagaaactg aatcccgacg
    16741 gcaatcccga ccatggtatt gccatagccc agatcatgat gaacaaacag cgggataacc
    16801 ggcaacggca gccctacggt catgtaggtg agaaaaaccg caaaagcgat gcggaagagc
    16861 gaaaaattgg cagaagatcg tgtttcggtt tggcttacag cagtcatgca ttactccaga
    16921 atgcagcgca aggcgaggag tatccccgtc tcatctctct ggtttcaggg ttacagtgcg
    16981 ttggcaggat ttaacgcgta cgtcttttca gaaggaaatc gacaaagcgg gaagtttgcc
    17041 tggaactggc ggcgattgtc aatgatgtga aaaagggaac catcaggttc ccttttgcgt
    17101 tagtgccgga ggccgcattg gcgcgtaacg tcggatgcga cgctggcgcg tcttatccga
    17161 cctactccga ctactccgac tactccgacc tactgcgaat taatctttca gcttgcgcat
    17221 taccagcgtg gcgttggtgc cgccgaagcc gaagctgtta gacataacgg tggtcagttc
    17281 gcgatcggtc gtttcggtca cgatgttcag acctgccgcc tgctcgtcca gctcttcaat
    17341 gttgatgctc ggggcgataa agccgtgttc cagcatcagc agagagtaga tagcttcctg
    17401 tacgccagca gcgcccagag agtgaccggt catggctttg gttgcagaaa tcgccgggct
    17461 cttatcgccg aacacttcac ggatagctgc cagttctttc acgtcgccaa ccggagtcga
    17521 agtaccatga gagttcaggt aatcgattgg ggtatcaacg ccgtgcatcg ccatcttcat
    17581 gcagcgtact gcgccttcgc cagacggagc aaccatgtct gcaccatcag aggttgcgcc
    17641 gtagccaacg atttcagcat agatgtgagc accacgcgcc agcgcgtgtt ccagctcttc
    17701 aaccactacc ataccgccgc cgccagcgat aacgaaaccg tcacggtgag cgtcgtaagt
    17761 acgggaggct ttttccgggg tgtcgttgta tttagtagac agcgcaccca tcgcgtcgaa
    17821 ttcgcaggcc atttcccagc acagctcttc gccgccgcca gcaaacacga tgtcctgttt
    17881 gcccagttgg atctgctcta ctgcgttacc gatacagtgt gcggaagtcg cacacgcgga
    17941 gctgatggag tagttaacgc catgaatttt aaacggcgtg gcgaggcagg cagaaacgcc
    18001 ggatgccatc gctttggtga ccacatacgg gccaaccgct ttcaggccgc gcgggccgcg
    18061 cattgcgtca gcgccgaata cctggaaacg cggggaaccg ccgccagaac ctgcaatcag
    18121 gccaacgcgc gggttattct ggtaagcttc cggagaaagg cccgcatctg cgattgcctg
    18181 ctccatagaa aggaatgcat aaatggatgc gtcgctcata aagcgcacaa ctttgcggtc
    18241 aatgaggcca gtggtatcca gttttacgtt gccccagacg tggctacgca tgccggaatc
    18301 cttaagctcc tgagagaaag tgatccctga acgtccttca cgcagagatg ccaggacttc
    18361 ctgctggtta ttaccgatgc tggaaacaat gcccaggcca gtaatcactg cacgtttcat
    18421 tcaatacctc tgtaagtcgc acatagagta agtttcgaat gcacaatagc gtacacttgt
    18481 acgccgaaca agtccgatca gccatttaat agagaaattt gcgcagcctt acacacatcg
    18541 ctaagatcga gccaccgcct gtaagacgag taacttacgt gaaacactac tccatacaac
    18601 ctgccaacct cgaatttaat gctgagggta cacctgtttc ccgagatttt gacgatgtct
    18661 atttttccaa cgataacggg ctggaagaga cgcgttatgt ttttctggga ggcaaccaat
    18721 tagaggtacg ctttcctgag catccacatc ctctgtttgt ggtagcagag agcggcttcg
    18781 gcaccggatt aaacttcctg acgctatggc aggcatttga tcagtttcgc gaagcgcatc
    18841 cgcaagcgca attacaacgc ttacatttca ttagttttga gaaatttccc ctcacccgtg
    18901 cggatttagc cttagcgcat caacactggc cggaactggc tccgtgggca gaacaacttc
    18961 aggcgcagtg gccaatgccc ttgcccggtt gccatcgttt attgctcgat gaaggccgcg
    19021 tgacgctgga tttatggttt ggcgatatta acgaactgac cagccaacag gacgattcgc
    19081 taaatcaaaa agtagatgcc tggtttctgg acggctttgc gccagcgaaa aacccggata
    19141 tgtggacgca aaatctgttt aacgccatgg caaggttggc gcgtccgggc ggcacgctgg
    19201 cgacatttac gtctgccggt tttgtccgcc gcggtttgca ggacgccgga ttcacgatgc
    19261 aaaaacgtaa gggctttggg cgcaaacggg aaatgctttg cggggtgatg gaacagacat
    19321 taccgctccc ctgctccgcg ccgtggttta accgcacggg cagcagcaaa cgggaagcgg
    19381 cgattatcgg cggtggtatt gcctgcgcgt tgttgtcgct ggcgctatta cggcgcggct
    19441 ggcaggtaac gctttattgc gcggatgagg cccccgcact gggtgcttcc ggcaatcgcc
    19501 agggggcgct gtatccgtta ttaagcaaac acgatgaggc gctaaaccgc tttttctcta
    19561 atgcgtttac ttttgctcgt cggttttacg accaattacc cgttaaattt gatcatgact
    19621 ggtgcggcgt cacgcagtta ggctgggatg agaaaagcca gcataaaatc gcacagatgt
    19681 tgtcaatgga tttacccgca gaactggctg tagccgttga ggcaaatgcg gttgaacaaa
    19741 ttacgggcgt tgcgacaaat tgcagcggca ttacttatcc gcaaggtggt tggctgtgcc
    19801 cagcagaact gacccgtaat gtgctggaac tggcgcaaca gcagggtttg cagatttatt
    19861 atcaatatca gttacagaat ttatcccgta aggatgactg ttggttgttg aattttgcag
    19921 gagatcagca agcaacacac agcgtagtgg tactggcgaa cgggcatcaa atcagccgat
    19981 tcagccaaac gtcgactctc ccggtgtatt cggttgccgg gcaggtcagc catattccga
    20041 caacgccgga attggcagag ctgaagcagg tgctgtgcta tgacggttat ctcacgccac
    20101 aaaatccggc gaatcaacat cattgtattg gtgccagtta tcatcgcggc agcgaagata
    20161 cggcgtacag tgaggacgat cagcagcaga atcgccagcg gttgattgat tgtttcccgc
    20221 aggcacagtg ggcaaaagag gttgatgtca gtgataaaga ggcgcgctgc ggtgtgcgtt
    20281 gtgccacccg cgatcatctg ccaatggtag gcaatgttcc cgattatgag gcaacactcg
    20341 tggaatatgc gtcgttggcg gagcagaaag atgaggcggt aagcgcgccg gtttttgacg
    20401 atctctttat gtttgcggct ttaggttctc gcggtttgtg ttctgccccg ctgtgtgccg
    20461 agattctggc ggcgcagatg agcgacgaac cgattccgat ggatgccagt acgctggcgg
    20521 cgttaaaccc gaatcggtta tgggtgcgga aattgttgaa gggtaaagcg gttaaggcgg
    20581 ggtaatctgc tctcgcagtg tttgccggat gcggcgtgaa cgccttatcc gacctacgtg
    20641 tgacgtgtag gcctgataag acgcgataag cgtcgcatca ggcatggtgc tccagacgcc
    20701 gcaacttact gctgtgacgc ctgctgaaac aggttttccc acatatcggt caccagcgcc
    20761 tggtcacgcg gcgacaattc accggcacca atggcttttt ccagactctg gctaacggtc
    20821 gtatgcaccg cctgagcgga gtggtcatca ccactttcca gttctgcgat ggctaatgtc
    20881 aggtggccac gcaaataccc actggcaaac aactcatcat cactggcatg gtcaatcatg
    20941 ccgtcgatta atgccagaat gcgtgattca aactccgcga tcatcttctt tcctcattgt
    21001 aaaacgtggc accggcttca gttgagcgct tccggccacg ggaactgttc cgccgtaagt
    21061 tccggcgtgt gataataatt ttgtagtgct ttaatgaagc gtgccggacg ctcgggaatg
    21121 ccatttgtca gataatccat cacctgcgca tgtacccgcc gttgaaacac cacacgatcc
    21181 ggttcgaagt cgccttccag attgtcgcaa ctgacgttaa acggatatcc cgccgccaca
    21241 cagaacaacc agtcgagtgc ctgcggcttc acttcaacat cttcaaactg gctttgcgtt
    21301 tgggcatcac gcccatccgg gcaataccag tagccgaaat caaccagctc acggcgcgct
    21361 tttccggcaa tacaccagtg cgaaatctca tgaattgcgc tggcataaaa gccgtgggca
    21421 aagacaattc ggttatacgg tacttccgca tcagcaggaa gatagatcgg ttcgtcgtcg
    21481 cctttaatca gacgggtatt aaattcatcg gcaaagcagc tattaaaaat ttcaatcaac
    21541 tgctcatagt ggtgtgtact gttcattagt tcatccccaa ccagtggagg atctcctgtc
    21601 cgtggctatc gtaaagtaat ttggcactca tcaccgccga gacgataacg atcatcgggc
    21661 ggatcagttt ttgtcctttg ctcagcacca gtcttgaacc catgcgcgcg ccgaggaact
    21721 gccccaccag catgacaaag cccgtcgccc aaatcacttt gccgccgaga ataaacagca
    21781 gcagaccgcc aatgtttgac gttgcgttga gtaatttggc gtgagccgtg gctttggcga
    21841 ggttgaatcc gcacagcgta acgaaggcca gcgcgtaaaa cgatccggca gccgggccaa
    21901 agaatccgtc ataaaaaccg acgcagccac cggcaattaa cgcgaagggt aaaccgtaca
    21961 tccggcgctg gcgatcttct tcacccagct ttggcatcag caagaaatag aggccgatac
    22021 aaattaccag aatgggcaaa atctgccgta agacatcagc ctgaacgtat tgcaccagca
    22081 gtgcgccgct cattgagccg gcaaaggtca tggcgatatt gagtttctga tcgcttaaac
    22141 taaccacttt gcggcgaata aagtagatag tggcggaaat agagccgccg caggcttgca
    22201 gtttattggt tgccagcgcg ttagcgggag acattcccgc agccatcaat gccggaatgg
    22261 tgagtaaccc accgccaccg gcaatcgagt cgataaatcc cgccagcatg gcgacaaaaa
    22321 agagaactcc cagcaacagc ggggaaacca taaacaggct attaaacgtt tccattagat
    22381 cacgtgctca tccagtagcg cctggcagga aggcggcaac ggaggcggtg tcttcttctc
    22441 aggctttgtt gttcctggtt ttggaggtgc aaaccagctt tgcagttctg ccccgcaacc
    22501 atcgcctggt ggcggtaaag gttgatcttc acactccaga ctatcggcag ggcaacgtaa
    22561 tcgtacatgc atatgcgcgc gatgctggaa ccagggtcgc actttgcgca accagtcgcg
    22621 atcggtgccc gcatcaaggc aaagttgttg tttaatcgcc ggattaacaa aaatgcgcgt
    22681 gacgtctttg tcctgggcgg cgagtttgat caagctgaaa atttctggct tccacagcgt
    22741 ggagacaacg tgtttaccgt cgcgggaaac taagtccagt gcttgcgggc gcaagagctg
    22801 cgcggaggtc cagcgagttt tcggcagttg cagaaagata tcgacatcca gtccggtctg
    22861 gtggctggca tgaccgccgt tgaaacgccc accagcgggc atccccatat cgccaatcag
    22921 caccgtaccc atgcccagat tgctcacctg gctactcaga cgctggataa acatcaccag
    22981 atccgggtga ccgaaatagc gacgctgatc ggtacgcatg acctgataat gttcggactg
    23041 tatcggcaac gtgtcagcgc cgacaataca gccattagaa aaactgccta tcgattgtgc
    23101 gctacccggc acaggttggg ttattttttg ccacggcgtc gctgccaagc tagcgctact
    23161 ggcaagcaga gccagcagcg caatcgcggt tttgttcatt ttttaccagc gtggaatatc
    23221 agtcttcaca tcggcatttt gcgcccgctg ccgtaacagg tgatccatta aaacgatcgc
    23281 cagcatcgct tcagcgatcg gcactgcacg gatcccgaca cagggatcgt gacgaccttt
    23341 ggtgatcatc tcaacttctt cgccaaagcg gttaatagtg cgccccggca cggtaatgct
    23401 ggaggtcggt ttcagcgcca tatgagcaat gatttgctgc ccgctgctga taccgccgag
    23461 aatgccgccc gcatggttgc tctggaaacc gtctttggtg atttcgtcgc ggttctggct
    23521 gccgcgcagc gccactacgt caaagccgtc gccaatttcc acgcctttca ccgcgttgat
    23581 gctcatcagc gcatgggcga tgtcggcatc caggcggtca aataccggct cgccaagtcc
    23641 ggcggggacg ccactggcaa caacggtgac tttcgcgccg atggagtcgc cctctttttt
    23701 cagcgcgcgc atcagttcat ctaacgcgtc gattttgtcc ggatccgggc agaagaacgg
    23761 attttgttca accagcgacc agtctttgat ttccagcgga atgtcgccca tctgggtcaa
    23821 gcagccgcgg atttcaatac caaatttctc ggcgagatat tttttggcaa tcgcccctgc
    23881 cgccacgcgc atggcggttt cgcgggcgga agaacgtcca ccgccgcgat aatcgcgcag
    23941 accgtatttt tgttcgtagg tgtaatcagc atggcctggg cggaaaacgt ctttaattgc
    24001 gctgtaatcc tgagagcgct ggtcagtgtt ttcgatcaac aagccaatgc tggtgccagt
    24061 agtaacgcct tcaaaaacac cagagagaat tttgacctga tccggctcgc ggcgctgggt
    24121 ggtatagcgc gatgtcccag ggcgacgacg gtcgaggtca tgttgcaggt ccgcttccgt
    24181 cagcagaatg cctggcggaa caccatcgac gatgcagccg agcgccagcc catgcgattc
    24241 gccgaaggtg gttacgcgaa agagttgtcc aattgtgttt ccagccatca cggctccgtt
    24301 attgttgtgt ttgcgtgttt acttaatctt tataaatcgc gaaatattca cgggccgcca
    24361 gcagctgctc tttggtgagc ataaacacac catcgccgcc gttatcaaac tccagccagg
    24421 tgaacggaac atccggatat tgttccataa gatgtaccat gctgttgccg acttcacaaa
    24481 tcaacacgcc atcatcagca aggtaatctg ccgcgtttcc aagaatgcga cgcgtcagtt
    24541 taaggccgtc ggtgccagat gccaggccca gttccggctc gtgacggtat tcgtttggca
    24601 ggtcggacat atcttccgcg tcgacatacg gcgggttagt gacaatcaga tcgtactgca
    24661 ctttcggcaa gtcgcggaac agatcggaac gaatcggaat gacgttgtgg atcagaccgt
    24721 gttcttcgat gttctgttca gcaaccgcca gcgcgtcggg agagatatcc accgcgtcga
    24781 cttctgcatc cgggaaggca taagcacagg caatggcgat gcagccgcta ccggtacaca
    24841 tatctaaaat atgctgcggt tgtttgctga tgagtccggc aaatttattg ttgatcagtt
    24901 caccaatcgg cgagcgcggc accagcacgc gttcatcgac gtaaaattca tgaccgcaga
    24961 accaggcttt gttggtcagg taagccaccg gaatgcgctc gttgacgcgg cggatcacgc
    25021 gttcaacaat acgatgtttt tcgctggagg tcagacgcgc ggtgcgcata tcttccggga
    25081 tatccagcgg caggtagagc gatggtaaca ccagctgtac ggcttcatcc cacgggttat
    25141 cggtgccgtg accgtaccag atatttgccg cgctgaagcg gctcactgac cagcgcaaca
    25201 tgtcctgaat ggtttgcagc tcatttactg cttcatcaac gaaaatttta tccacgtatt
    25261 cctccagggc atgatcgcaa taatttcggc ggctagtttg ccatgaagat gacgataaat
    25321 cagcattcac gcgcggtgag tgaggaaaaa tacgtttaaa acgatcgatt gtgctacgag
    25381 tcgggtaaac tgtaggaaaa ttagaaatag agacagataa atgaaaaaga aaacaacact
    25441 tagcgaggag gaccaggctc tgtttcgcca gttgatggcg gggactcgca agattaagca
    25501 ggacacgatt gtccaccgac cgcagcgtaa aaaaatcagc gaagtgccgg tgaaacgctt
    25561 gatccaggag caggctgatg ccagccatta tttctccgat gagtttcagc cgttattaaa
    25621 taccgaaggt ccggtgaaat atgttcgccc ggatgtcagc catttcgagg cgaagaaact
    25681 gcgccgcggc gattattcac cggaattgtt tttggattta cacggtctga cgcagctgca
    25741 ggccaagcag gaactgggcg cgttgattgc cgcctgtcgc cgcgaacatg tgttttgtgc
    25801 ctgcgtgatg catgggcacg ggaagcatat tttgaagcaa caaacaccgc tgtggctggc
    25861 acaacatccg catgtgatgg catttcacca ggcaccgaaa gagtacggcg gtgatgcggc
    25921 tttgttggtg ttgattgaag tggaagagtg gttgccgccg gagttgccct gaggagttga
    25981 gcgtgttgtg ccaggagcgc ggaatggcag gggcgaatga ccctgccagg tgagaaaagg
    26041 tgcgctaata catattcagt atgtaagtga atcggcaggt agaatctatg ggctgtcgag
    26101 atgtcgtgtc cacgcgtagc ttcatatcat gcagttgcct ggacgtaatc ggttgcggct
    26161 caggcgtcac cgtcactttg gcattatcac agccggaagt cgagaaggtc atctgctgtg
    26221 cgataaaacg gcagtagaca ccacgctcat caaaattatt cccgttacac agtttgccat
    26281 tttccatcag gaaagtgggc agtgtttgct caataacacc acctgttgac tgcaacctga
    26341 cgactttgtt atgtacaaca taattttcat tccaggaaac atcatacggt gccaggggca
    26401 ccgccggaca tgaagaactc accttcgttg ggccaatata gtcaggaaaa tcatcatcat
    26461 acgttttagc gaagggatct ctactcttaa caaacgacga cacaatccac ggacaaccat
    26521 gtaaattccc atcgtaataa acaaacatct ttaattcatt acatgtccat cccgttttgg
    26581 tctggctatc atactgctct aatccaggac aggctgacat ggataccctg ctgtccgaaa
    26641 ttttcgacat agatggttga gtagaactat cgccagtcca cgaaactaaa tccggctgtg
    26701 aattgggcat gaatgtagcc ttaaatatag cgtaattaac tgaatctggc gtcgctataa
    26761 tcagatgaaa ctcaaactc
//
LOCUS       DADMJE010000043        25805 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.044, whole genome shotgun sequence.
ACCESSION   DADMJE010000043 DADMJE010000000
VERSION     DADMJE010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25805)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25805)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25805
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.044"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(82..2301)
                     /locus_tag="JN001_001626"
     CDS             complement(82..2301)
                     /locus_tag="JN001_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgiQ family radical SAM protein"
                     /protein_id="HAY9052892.1"
                     /translation="MSSISLIQPDRDLFSWPQYWAACFGPAPFLPMSSEEMDQLGWDS
                     CDIILVTGDAYVDHPSFGMAICGRMLEAQGFRVGIIAQPDWSSKDDFMRLGKPNLFFG
                     VTAGNMDSMINRYTADRRLRHDDAYTPDNVAGKRPDRATLVYTQRCKEAWKDVPVILG
                     GIEASLRRTAHYDYWSDTVRRSVLVDSKADMLMFGNGERPLVEVAHRLAMGEPISEIR
                     DVRNTAIIVKEALPGWSGVDSTRLDTPGKIDPIPHPYGEDLPCADNKPVAPKKQEAKA
                     VTVQPPRPKPWEKTYVLLPSFEKVKGDKVLYAHASRILHHETNPGCARALMQKHGDRY
                     VWINPPAIPLSTEEMDSVFALPYKRVLHPAYGNVRIPAYEMIRFSVNIMRGCFGGCSF
                     CSITEHEGRIIQSRSEDSIINEIEAIRDTVPGFTGVISDLGGPTANMYMLRCKSPRAE
                     QTCRRLSCVYPDICPHMDTNHEPTINLYRRARDLKGIKKILIASGVRYDIAVEDPRYI
                     KELATHHVGGYLKIAPEHTEEGPLSKMMKPGMGSYDRFKELFDTYSKQAGKEQYLIPY
                     FISAHPGTRDEDMVNLALWLKKHRFRLDQVQNFYPSPLANSTTMYYTGKKPLAKIGYK
                     SEDVFVPKGDKQRRLHKALLRYHDPANWPLIRQALEAMGKKHLIGSRRDCLVPAPTIE
                     EMREARRQNRNTRPALTKHTPMATQRQTPATAKKASSTQSRPVNAGAKKRPKAAVGR"
     gene            complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="JN001_001627"
     CDS             complement(2412..3824)
                     /gene="ftsP"
                     /locus_tag="JN001_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsP"
                     /protein_id="HAY9052893.1"
                     /translation="MSLSRRQFIQASGIALCAGAVPLKASAAGQQQPLPVPPLLESRR
                     GQPLFMTVQRAHWSFTPGTRASVWGINGRYLGPTIRVWKGDDVKLIYSNRLTENVSMT
                     VAGLQVPGPLMGGPARMMSPNADWAPVLPIRQNAATLWYHANTPNRTAQQVYNGLAGM
                     WLVEDEVSKSLPIPNHYGVDDFPVIIQDKRLDNFGTPEYNEPGSGGFVGDTLLVNGVQ
                     SPYVEVSRGWVRLRLLNASNSRRYQLQMSDSRPLHVISGDQGFLPAPVSVKQLSLAPG
                     ERREILVDMSNGDEVSITCGEAASIVDRIRGFFEPSSILVSTLVLTLRPTGLLPLVTD
                     SLPMRLLPTEIMAGSPIRSRDISLGDDPGINGQLWDVNRIDVTAQQGTWERWTVRADE
                     PQAFHIEGVMFQIRNVNGAMPFLEDRGWKDTVWVDGQVELLVYFGQPSWAHFPFYFNS
                     QTLEMADRGSIGQLLVNPVP"
     gene            complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="JN001_001628"
                     /gene_synonym="parF"
     CDS             complement(3899..4636)
                     /gene="plsC"
                     /locus_tag="JN001_001628"
                     /gene_synonym="parF"
                     /EC_number="2.3.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acylglycerol-3-phosphate O-acyltransferase"
                     /protein_id="HAY9052894.1"
                     /translation="MLYIFRLIITVIYSILVCVFGSIYCLFSPRNPKHVATFGHMFGR
                     LAPLFGLKVECRKPADAESYGNAIYIANHQNNYDMVTASNIVQPPTVTVGKKSLLWIP
                     FFGQLYWLTGNLLIDRNNRTKAHGTIAEVVNHFKKRRISIWMFPEGTRSRGRGLLPFK
                     TGAFHAAIAAGVPIIPVCVSTTSNKINLNRLHNGLVIVEMLPPIDVSQYGKDQVRELA
                     AHCRSIMEQKIAELDKEVAEREAAGKV"
     gene            complement(4869..7127)
                     /gene="parC"
                     /locus_tag="JN001_001629"
     CDS             complement(4869..7127)
                     /gene="parC"
                     /locus_tag="JN001_001629"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001639862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HAY9052895.1"
                     /translation="MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRR
                     IVYAMSELGLNASAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDG
                     QGNWGAPDDPKSFAAMRYTESRLSKYSELLLSELGQGTADWVPNFDGTLQEPKMLPAR
                     LPNILLNGTTGIAVGMATDIPPHNLREVAQAAIALIDQPKTTLDQLLDIVQGPDYPTE
                     AEIITSRAEIRKIYENGRGSVRMRAVWKKEDGAVVISALPHQVSGARVLEQIAAQMRN
                     KKLPMVDDLRDESDHENPTRLVIVPRSNRVDMDQVMNHLFATTDLEKSYRINLNMIGL
                     DGRPAVKNLLEILSEWLVFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEI
                     IRNEDEPKPALMSRFGLTETQAEAILELKLRHLAKLEEMKIRGEQSELEKERDQLQGI
                     LVSERKMNNLLKKELQADAQAYGDDRRSPLQEREEAKAMSEHDMLPSEPVTIVLSQMG
                     WVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFVDSTGRSYAIDPITLPSARGQ
                     GEPLTGKLTLPPGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITL
                     PENAHVMPPVVIEDASDMLLAITQAGRMLMFPVSDLPQLSKGKGNKIINIPSAEAARG
                     EDGLAQLYVLPPQSTLTIHVGKRKIKLRPEELQKVTGERGRRGTLMRGLQRIDRVEID
                     SPRRASSGDSEE"
     gene            complement(7673..8155)
                     /locus_tag="JN001_001630"
     CDS             complement(7673..8155)
                     /locus_tag="JN001_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY9052896.1"
                     /translation="MTNLTLDVNIIDFPSIPVAMLPHRCSPELLNYSVAKFIMWRKET
                     GLSPVNQSQTFGVAWDDPATTAPKAFRFDICGSVSEPIPDNRYGVSNGELTGGRYAVA
                     RHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGMTEQRLETDVYVPLA
                     "
     gene            complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="JN001_001631"
     CDS             complement(8208..8600)
                     /gene="ygiW"
                     /locus_tag="JN001_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB fold stress tolerance protein YgiW"
                     /protein_id="HAY9052897.1"
                     /translation="MKKFAAVIAVMALCSAPVMAAEQGGFSGPSATQSQAGGFQGPNG
                     SVTTVESAKSRRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPK
                     DTVEIQGEVDKDWNSVEIDVKQIRKVNP"
     gene            8752..9411
                     /gene="qseB"
                     /locus_tag="JN001_001632"
     CDS             8752..9411
                     /gene="qseB"
                     /locus_tag="JN001_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator QseB"
                     /protein_id="HAY9052898.1"
                     /translation="MRILLIEDDMLIGDGIKTGLSKMGFSVDWFTQGRQGKEALYSAP
                     YDAVILDLTLPGMDGRDILREWREKGQREPVLILTARDALAERVEGLRLGADDYLCKP
                     FALIEVAARLEALMRRTNGQASNELRHGNVMLDPGKRIATLASEPLTLKPKEFALLEL
                     LMRNAGRVLPRKLIEEKLYTWDEEVTSNAVEVHVHHLRRKLGSDFIRTVHGIGYTLGE
                     K"
     gene            9408..10757
                     /gene="qseC"
                     /locus_tag="JN001_001633"
     CDS             9408..10757
                     /gene="qseC"
                     /locus_tag="JN001_001633"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     QseC"
                     /protein_id="HAY9052899.1"
                     /translation="MKFTQRLSLRVRLTLIFLILASVTWLLSSFVAWKQTTDNVDELF
                     DTQLMLFAKRLSTLDLNEINAADRMAQTPNKLKHGHVDDDALTFAIFTHDGRMVLNDS
                     DNGEDIPYSYQREGFADGQLVGEDDPWRFVWMTSPDGKYRIVVGQEWEYREDMALAIV
                     AGQLIPWLVALPIMLIIMMVLLGRELAPLNKLALALRMRDPDSEKPLNATGVPSEVRP
                     LVESLNQLFARTHAMMVRERRFTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKAL
                     LQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQSSVMDIYHTAQQAKID
                     VRLTLNVQGIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNADNFIVRDNGPGV
                     TPEALARIGERFYRPSGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSW"
     gene            10867..11448
                     /gene="mdaB"
                     /locus_tag="JN001_001634"
     CDS             10867..11448
                     /gene="mdaB"
                     /locus_tag="JN001_001634"
                     /EC_number="1.6.5.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH:quinone oxidoreductase MdaB"
                     /protein_id="HAY9052900.1"
                     /translation="MSNILIINGAKKFAHSNGQLNDTLTEVADGTLRDLGHDVRIVRA
                     DSDYDVKAEVQNFLWADVVIWQMPGWWMGAPWTVKKYIDDVFTEGHGTLYASDGRTRK
                     DPSKKYGSGGLVQGKKYMLSLTWNAPMEAFTEKDQFFHGVGVDGVYLPFHKANQFLGM
                     EPLPTFIANDVIKMPDVPRYTEEYRKHLVEIFG"
     gene            11479..11793
                     /locus_tag="JN001_001635"
     CDS             11479..11793
                     /locus_tag="JN001_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HAY9052901.1"
                     /translation="MLTVIAEIRTRPGQHHRQAVLDQFAKIVPTVLKEEGCHGYAPMV
                     DCAAGVSFQSMAPDSIVMIEQWESIAHLEAHLQTPHMKAYSEAVKGDVLEMNIRILQP
                     GI"
     gene            complement(11841..13733)
                     /gene="parE"
                     /locus_tag="JN001_001636"
     CDS             complement(11841..13733)
                     /gene="parE"
                     /locus_tag="JN001_001636"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HAY9052902.1"
                     /translation="MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSV
                     DEALAGHAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKFSN
                     KNYQFSGGLHGVGISVVNALSKRVEVNVRRDGQIYNIAFENGEKVQDLQVVGTCGKRN
                     TGTSVHFWPDETFFDSPRFSVSRLTHVLKAKAVLCPGVEITFKDEINNTEQRWCYQDG
                     LNDYLAEAVNGLPTLPEKPFIGNFAGDTEAVDWALLWLPEGGELLTESYVNLIPTMQG
                     GTHVNGLRQGLLDAMREFCEYRNILPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTK
                     ERLSSRQCAAFVSGVVKDAFILWLNQNVQAAELLAEMAISSAQRRMRAAKKVVRKKLT
                     SGPALPGKLADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
                     SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIATLLCALFVK
                     HFRALVKHGHVYVALPPLYRIDLGKEVYYALTEEEKEGVLEQLKRKKGKPNVQRFKGL
                     GEMNPMQLRETTLDPNTRRLVQLTIDDEDDQRTDAMMDMLLAKKRSEDRRNWLQEKGD
                     MAEIEV"
     gene            complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="JN001_001637"
     CDS             complement(13762..14343)
                     /gene="yqiA"
                     /locus_tag="JN001_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase YqiA"
                     /protein_id="HAY9052903.1"
                     /translation="MSTLLYLHGFNSSPRSAKASLLKNWLAEHHPDVEMIIPQLPPYP
                     SDAAELLESIVLEHGGDSLGIVGSSLGGYYATWLSQCFMLPAVVVNPAVRPFELLTDY
                     LGQNENPYTGQQYVLESRHIYDLKVMQIDPLEAPDLIWLLQQTGDEVLDYRQAVAYYA
                     SCRQTVIEGGNHAFTGFEDYFNPIVDFLGLHHL"
     gene            complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="JN001_001638"
     CDS             complement(14343..15170)
                     /gene="cpdA"
                     /locus_tag="JN001_001638"
                     /EC_number="3.1.4.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3',5'-cyclic-AMP phosphodiesterase"
                     /protein_id="HAY9052904.1"
                     /translation="MESLLTLPLAGEARVRILQITDTHLFAQKHEALLGVNTWESYQA
                     VLEAIRPHQHEFDLIVATGDLAQDQSSAAYQHFAEGIASFRAPCVWLPGNHDFQPAMY
                     SALQDAGISPAKRVFIGEQWQILLLDSQVFGVPHGELSEFQLEWLERKLADAPERHTL
                     LLLHHHPLPAGCSWLDQHSLRNAGELDTVLAKFPHVKYLLCGHIHQELDLDWNGRRLL
                     ATPSTCVQFKPHCSNFTLDTIAPGWRTLELHADGTLTTEVHRLADTRFQPDTASEGY"
     gene            complement(15195..15617)
                     /locus_tag="JN001_001639"
     CDS             complement(15195..15617)
                     /locus_tag="JN001_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1249 family protein"
                     /protein_id="HAY9052905.1"
                     /translation="MKRYTPDFPEMMRLCEMNFSQLRRLLPRNDAPGETVSYQVANAQ
                     YRLTTVESTRYTTLVTIEQTAPAISYWSLPSMTVRLYHDAMVAEVCSSQQIFRFKARY
                     DYPNKKLHQRDEKHQINQFLADWLRYCLAHGAMAIPVY"
     gene            complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="JN001_001640"
     CDS             complement(15618..16247)
                     /gene="nudF"
                     /locus_tag="JN001_001640"
                     /EC_number="3.6.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose diphosphatase"
                     /protein_id="HAY9052906.1"
                     /translation="MLKPDNLPVTFGKNDVEIIARETLYRGFFSLDLYRFRHSLFNGQ
                     MSHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSETPWLLEMVAGMIEEG
                     ESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGIHGLA
                     DENEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQALKNEWA"
     gene            16452..17933
                     /gene="tolC"
                     /locus_tag="JN001_001641"
     CDS             16452..17933
                     /gene="tolC"
                     /locus_tag="JN001_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417507.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane channel protein TolC"
                     /protein_id="HAY9052907.1"
                     /translation="MKKLLPILIGLSLSGFSSLSQAENLMQVYQQARLSNPELRKSAA
                     DRDAAFEKINEARSPLLPQLGLGADYTYSNGYRDANGINSNATSASLQLTQSIFDMSK
                     WRALTLQEKAAGIQDVTYQTDQQTLILNTATAYFNVLNAIDVLSYTQAQKEAIYRQLD
                     QTTQRFNVGLVAITDVQNARAQYDTVLANEVTARNNLDNAVEQLRQITGNYYPELAAL
                     NVENFKTDKPQPVNALLKEAEKRNLSLLQARLSQDLAREQIRQAQDGHLPTLDLTAST
                     GISDTSYSGSKTRGAAGTQYDDSNMGQNKVGLSFSLPIYQGGMVNSQVKQAQYNFVGA
                     SEQLESAHRSIVQTVRSSFNNINASISSINAYKQAVVSAQSSLDAMEAGYSVGTRTIV
                     DVLDATTTLYNAKQELANARYNYLINQLNIKSALGTLNEQDLLALNNALSKPVSTNPE
                     NVAPQTPEQNAIADGYAPDSPAPVVQQTSARTTTSNGHNPFRN"
     gene            18081..18752
                     /locus_tag="JN001_001642"
     CDS             18081..18752
                     /locus_tag="JN001_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417509.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 family protein"
                     /protein_id="HAY9052908.1"
                     /translation="MKRTKSIRHASFRKNWSARHLTPVALAVATVFMLASCEKSDETV
                     SLYQNADDCSAANPGKSAECTTAYNNALKEAERTAPKYATREDCVAEFGEGQCQQAPA
                     QAGMAPENQAQAQQSSGSFWMPLMAGYMMGRLMGGGAGFAQQPLFSSKNPASPAYGKY
                     TDATGKNYGAAQPGRTMTVPKTAMAPKPATTTTVTRGGFGESVAKQSTMQRSATGTSS
                     RSMGG"
     gene            18758..19918
                     /locus_tag="JN001_001643"
     CDS             18758..19918
                     /locus_tag="JN001_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY9052909.1"
                     /translation="MERVSITERPDWREKAHEYGFNFHTMYGEPYWCEDAYYKLPLAQ
                     VEKLEEVTAELHQMCLKVVEKVIASDELMTKFRIPKHTWSFVRQSWLTHQPSLYSRLD
                     LAWDGTGEPKLLENNADTPTSLYEAAFFQWIWLEDQLNAGNLPEGSDQFNSLQEKLID
                     RFVELREQYGFQLLHLTCCRDTVEDRGTIQYLQDCATEAEIATEFLYIDDIGLGEKGQ
                     FTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPAWKSIISNKALLPLLWEM
                     FPNHPNLLPAYFAEDDHPQMEKYVVKPIFSREGANVSIIENGKTIEAAEGPYGEEGMI
                     VQQFHPLPKFGDSYMLIGSWLVNDQPAGIGIREDRALITQDMSRFYPHIFVE"
     gene            complement(19956..20771)
                     /gene="ygiD"
                     /locus_tag="JN001_001644"
     CDS             complement(19956..20771)
                     /gene="ygiD"
                     /locus_tag="JN001_001644"
                     /EC_number="1.13.11.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311954.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4,5-DOPA dioxygenase extradiol"
                     /protein_id="HAY9052910.1"
                     /translation="MTPLVKDIIMSSTRMPALFLGHGSPMNVLEDNLYTRSWQKLGMT
                     LPRPQAIVVVSAHWFTRGTGVTAMETPPTIHDFGGFPQALYDTHYPAPGSPVLAQHLV
                     ELLAPVPVTLDKEARGFDHGSWGVLIKMYPDADIPMVQLSIDSSKPAAWHFEMGRKLA
                     ALRDEGIMLVASGNVVHNLRTVKWHGDSSPYPWAMSFNEYVKANLTWQGAVEQHPLVN
                     YLDHEGGALSNPTPEHYLPLLYVLGAWDGQEPITIPVDGIEMGSLSMLSVQIG"
     gene            20887..21648
                     /gene="zupT"
                     /locus_tag="JN001_001645"
     CDS             20887..21648
                     /gene="zupT"
                     /locus_tag="JN001_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZupT"
                     /protein_id="HAY9052911.1"
                     /translation="MSVPLILTILAGAATFIGAFLGVLGQKPSNRLLAFSLGFAAGIM
                     LLISLMEMLPAALAAEGISPVLGYGMFIFGLLGYFGLDRMLPHAHPQDLMQKSVQPLP
                     KSIKRTAILLTLGISLHNFPEGIATFVTASSNLELGFGIALAVALHNIPEGLAVAGPV
                     YAATGSKRTAILWAGISGLAEILGGVLAWLILGSMISPVVMAAVAGIMVALSVDELMP
                     LAKEIDPNNNPSYGVLCGMSVMGFSLVLLQTAGIG"
     gene            complement(21706..21876)
                     /locus_tag="JN001_001646"
     CDS             complement(21706..21876)
                     /locus_tag="JN001_001646"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052912.1"
                     /translation="MFIAWYWIVLIALVVVGYFLHLKRYCRAFRQDRDALLEARNKYL
                     NSTREETAEKVE"
     gene            complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="JN001_001647"
     CDS             complement(22136..22789)
                     /gene="ribB"
                     /locus_tag="JN001_001647"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001077009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HAY9052913.1"
                     /translation="MNQTLLSSFGTPFERVENALAALREGRGVMVLDDEDRENEGDMI
                     FPAETMTVEQMALTIRHGSGIVCLCITEDRRKQLDLPMMVENNTSAYGTGFTVTIEAA
                     EGVTTGVSAADRITTVRAAIADGAKPSDLNRPGHVFPLRAQAGGVLTRGGHTEATIDL
                     MTLAGFKPAGVLCELTNDDGTMARAPECIEFANKHNMALVTIEDLVAYRQAHERKAS"
     regulatory      complement(22893..23041)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            23103..23453
                     /gene="ubiK"
                     /locus_tag="JN001_001648"
     CDS             23103..23453
                     /gene="ubiK"
                     /locus_tag="JN001_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis accessory factor UbiK"
                     /protein_id="HAY9052914.1"
                     /translation="MTYPYRTTMVLNTYQYRETTMIDPKKIEQIARQVHESMPKGIRE
                     FGEDVEKKIRQTLQAQLTRLDLVSREEFDVQTQVLLRTREKLALLEQRMSELENRSTE
                     IKKQPDPETLPPTL"
     gene            23737..24288
                     /locus_tag="JN001_001649"
     CDS             23737..24288
                     /locus_tag="JN001_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial-like protein"
                     /protein_id="HAY9052915.1"
                     /translation="MSAFKKSLLVAGVAMILSNNVFADEGHGIVKFKGEVISAPCSIK
                     PGDEDLTVNLGEVADTVLKSDQKSLAEPFTIHLQDCMLSQGGTTYSKAKVTFTTANTM
                     TGQTDLLKNTKETEIGGATGVGVRILNSQSGEVTLGTPVVITFNNTNSYQELNFKVRM
                     ESPGKDATPGNVYAQADYKIAYE"
     gene            24348..>25805
                     /locus_tag="JN001_001650"
     CDS             24348..>25805
                     /locus_tag="JN001_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001480735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY9052916.1"
                     /translation="MYKKLKLTTISELIKNIYCSLSVLIIGCASAYAVEFNKDLIEAE
                     DRENVNLSQFETDGQLPVGKYSLNAIINNKRTPIHLDLQWVLIDNQTAVCLTPEQLTL
                     LGFTDEIIEEAQQNLNDGCYPIEKEKQITTYLDKGKMQLSISAPQAWLKYKDANWTPP
                     ELWDHGIAGAFLDYNLYASHYAPHQGDNSQNISSYGQAGVNLGAWRLRTDYQYDQSFN
                     NGKSQANNLDFPRIYLFRPIPAINAKLTIGQYDTESSIFDSFHFSGVSLKSDENMLPP
                     DLRGYAPQITGVAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNTLQGQLDVKVEEE
                     DGQVTQWQVASNSIPYLTRKGQIRYTTAMGKPTSVGGDSLQQPFFWTGEFSWGWLNNV
                     SLHGGSVLTNRDYQSLAAGVGFNLNSLGSLSFDVTRSDTQLHNQDKETGYSYRANYSK
                     RFESTGSQLTFAGYRFSDKNFVTMNEYINDTNHYTN"
BASE COUNT         6461 a         6801 c         6371 g         6172 t
ORIGIN      
        1 tcggcatata aataaatgcc taatgagata gattctgatg taatatcccc ggtagcaatt
       61 ctgctaccgg gaacagcgaa tttaacgtcc aaccgccgct ttaggccgtt tcttcgcacc
      121 agcattcacc ggacgagatt gcgtagacga cgcttttttt gccgtagcag gcgtctgacg
      181 ctgggtcgcc atcggcgtat gtttcgtcaa cgccggacgg gtattgcggt tctggcgacg
      241 agcttcacgc atctcttcaa tggttggcgc aggcactaag caatcgcgac ggctaccaat
      301 cagatgcttt ttacccatcg cttccagcgc ctggcggatt aacggccagt ttgccggatc
      361 gtggtaacgc aacaacgctt tatgcaaacg acgctgcttg tcgcccttcg gtacgaagac
      421 gtcttcactc ttataaccaa tcttcgccag cggttttttc ccggtgtaat acatggtggt
      481 tgagttcgcc agcggcgatg ggtagaagtt ctgtacctgg tcgagacgga aacgatgctt
      541 tttcagccac agcgccagat tcaccatatc ttcatcacgc gtaccggggt gcgcggagat
      601 gaaatagggg atcagatact gctctttacc tgcctgtttt gagtaagtat cgaacagctc
      661 tttaaagcgg tcatagctgc ccatgcccgg cttcatcatc ttcgataacg gcccttcttc
      721 ggtatgttcc ggggcaatct tcagataacc gccgacgtga tgggtcgcca gttctttgat
      781 atagcgcgga tcttccacgg cgatgtcata acgcacacca gaggcaatca ggatcttttt
      841 aatgcctttc agatcacgcg cacggcgata gaggttgatc gttggttcgt ggttcgtgtc
      901 catgtgcgga caaatatccg gataaacgca cgacaaacgg cggcaggttt gctcagcgcg
      961 tggcgatttg cagcgcaaca tatacatgtt ggcagttggc ccaccgagat cggaaattac
     1021 gcccgtaaaa cctggaacgg tgtcgcggat cgcttcgatc tcattaatga tcgaatcttc
     1081 ggaacggctc tgaataatgc gcccttcgtg ctcggtgata gaacagaaag agcagccgcc
     1141 aaagcagcca cgcataatgt tgaccgaaaa acggatcatt tcgtaagccg gaatacggac
     1201 attgccatag gccggatgta gcacgcgctt gtatggcagc gcaaaaacgc tgtccatctc
     1261 ttcggtagaa agcggaatag caggcgggtt gatccacaca tagcggtcgc cgtgtttttg
     1321 catcaatgcg cgggcacagc ctgggttggt ttcgtggtgc agaatacgcg aagcatgggc
     1381 gtacagcact ttatcgccct tcactttctc gaaagaaggc agcaacacgt aggttttttc
     1441 ccacggtttc gggcgcggtg gctgcacggt tacggctttg gcttcctgct ttttcggtgc
     1501 caccggtttg ttatccgcgc acggcaaatc ttcaccatac ggatgcggga ttgggtcgat
     1561 ttttccaggg gtatcaagac gggtggaatc cacgccgctc cagccaggca gggcctcttt
     1621 cacgataatc gcggtattac gcacatcgcg gatttcacta atcggctcgc ccatcgccag
     1681 acggtgcgcc acctccacca gcggacgctc accgttacca aacatcagca tgtcggcttt
     1741 cgaatccacc agcacggaac ggcgcacggt atcggaccag taatcataat gtgcggtacg
     1801 acgcagacta gcctcaatac cgccgaggat caccggtaca tctttccacg cctctttaca
     1861 acgctgggta taaaccagtg tggcgcgatc cgggcgctta cccgcgacgt tatccggcgt
     1921 gtaggcatcg tcatgacgta aacggcgatc ggcggtataa cggttgatca tcgaatccat
     1981 gttgccagca gtaacaccga aaaacagatt cggtttaccc agacgcataa agtcgtcttt
     2041 gctgctccag tccggctggg cgatgatccc gacgcgaaag ccctgcgctt ccagcatacg
     2101 accgcaaatc gccatcccga agcttgggtg atcgacatac gcgtcgccag taaccaaaat
     2161 gatgtcgcag ctatcccagc caagttgatc catctcttca ctagacatcg gcaaaaacgg
     2221 tgccggtcca aaacaggcgg cccagtactg cggccaggag aacaggtcgc gatccggttg
     2281 gatcagggag atagagctca ttttgcttcc agaaatgata aaaaaataat caaaggccgg
     2341 ggattataag ccggaacgaa agagaaatcg aaaagtattc catactcgcc ctcctcgggc
     2401 gagtatgaag attacggtac cggattgact aacagttgcc caatcgagcc acggtccgcc
     2461 atttccagcg tctgactgtt gaagtagaac gggaagtgcg cccaggaagg ctgaccgaaa
     2521 taaacaagca gctccacttg tccgtcaacc caaacggtat ctttccagcc tctgtcttcc
     2581 aggaacggca tcgcaccatt cacgttacgg atctggaaca tcacgccttc aatatggaac
     2641 gcttgcggct cgtccgcgcg taccgtccag cgttcccacg ttccttgctg cgcggtgaca
     2701 tcaatacggt tgacgtccca cagttgtcca ttaatacccg ggtcatcacc cagactgata
     2761 tcgcgactgc gaatcggcga accggccatg atttcagttg gcagcaagcg catcggaaga
     2821 ctgtctgtga ccagcggcag aaggccggtt gggcgcagcg ttagcaccag ggtagaaacc
     2881 agaatgctgg atggctcaaa gaagccacga atacgatcaa caatgctcgc cgcttcgcca
     2941 caggtgatcg acacttcatc accgttgctc atatccacca gaatctcgcg gcgctcgccc
     3001 ggtgccaacg aaagttgctt caccgataca ggagcaggca ggaatccctg atcgccagaa
     3061 atcacatgta acgggcgact atcgctcatc tgtagttgat agcgacgaga gttcgacgcg
     3121 ttcagcagtc gcaagcgcac ccagccacgc gagacttcaa cgtacgggct ttgtacaccg
     3181 ttaaccagca gcgtatcacc aacaaagccg ccgcttcccg gttcgttgta ttctggcgta
     3241 ccaaagttat ccagccgttt atcctggata atgaccggaa aatcatccac accataatgg
     3301 ttggggatag gcagcgactt gctgacttca tcttccacca gccacattcc ggcaaggccg
     3361 ttatagacct gctgagccgt gcggttggga gtattggcgt gataccacag agtagctgcg
     3421 ttctggcgaa tgggcagtac gggtgcccag tcagcgtttg gcgacatcat ccgtgccgga
     3481 ccgcccatca gcgggcctgg tacctgtagc ccggccaccg tcattgagac attttctgtc
     3541 aggcggttgc tgtaaataag cttaacatcg tcgcccttcc agacgcggat agtcggcccc
     3601 aggtaacgac cattgattcc ccagaccgac gcgcgtgtcc ctggcgtaaa tgaccagtgc
     3661 gcacgttgta cagtcataaa cagcggttgc ccacggcgag attcaagtag cggcggaacg
     3721 ggtagcggtt gctgttgccc ggctgcgctg gccttcaggg gaacagcgcc ggcacaaagt
     3781 gcaatccccg atgcctgaat gaactgacgc cgactgagtg acatatttgc tccatgtaaa
     3841 actggctaaa gtaataccgt gcaggaaagt gttccccgca aaaatacaga ttgccgactt
     3901 aaacttttcc ggcggcttcg cgttctgcga cttctttatc gagctcggcg attttttgtt
     3961 ccattatcga acgacaatgg gcagccagct cacgaacctg atctttgcca tactgactga
     4021 cgtcaattgg cggcagcatt tcgacaatca ccagaccgtt gtgcagtcga ttaagattaa
     4081 tcttattcga agttgtagag acgcacacgg gaataatcgg gacgcccgcc gcaattgccg
     4141 cgtgaaatgc tccagtcttg aacggtagca ggccgcgacc acggctgcgg gttccttccg
     4201 ggaacatcca gatggaaata cggcgttttt tgaaatgatt cacgacttcc gcaatggtgc
     4261 cgtgagcttt agtgcgattg tttctgtcga tcaataagtt gccggttaac cagtacaact
     4321 gcccgaagaa ggggatccac agcaagctct ttttacctac cgtcaccgtc ggcggttgca
     4381 caatgttcga tgctgtcacc atgtcatagt tgttctggtg gttagcgata tagatagcat
     4441 tgccgtagct ttcagcatct gcaggtttgc ggcactcaac tttcaggccg aacagcggcg
     4501 caagacggcc aaacatatgc ccaaaggtgg ccacatgttt cgggttacgc gggctgaaaa
     4561 ggcagtaaat ggagccgaat acacagacta agatgctgta aatcacggta ataataagac
     4621 gaaagatata tagcataaca acctctgaag gtctgagaga ctggcattgt acgtcacctg
     4681 aaatcaggtt agggcattgt taaaagccgc tctctggaaa agcgtattgt taatcgcaac
     4741 gcatgaataa acaacggttt caagggaatt tttatcgttt ccgggggttg aatacgctgc
     4801 cggatgacga cttaacgttt catccggcgt tccttgcaag cgggaggaaa caggccctcc
     4861 ccggcatatt actcttcgct atcaccgctg ctggcacggc gaggagagtc gatctcaaca
     4921 cgatcgatac gctgcaaacc gcgcatcaac gtaccgcggc gtccacgttc gccagtgact
     4981 ttctgtaact cttccgggcg cagtttaatt ttgcgtttcc caacatgaat ggtcagcgtg
     5041 ctttgcggcg gcagaacgta caattgcgcc agaccatctt ctccacgcgc ggcttctgcc
     5101 gatggaatgt tgataatctt gttgcctttg cccttcgaca gctgcggcag atcgcttacc
     5161 gggaacatca acatacggcc tgcctgagtg attgccagca gcatatcgga agcatcttca
     5221 atcaccaccg gcggcataac atgggcattt tccggtaagg tgatcaaagc cttacctgca
     5281 cggttacgcg ccaccagatc gttaaaggtg cagacgaaac cgtaacccgc atcggaagcc
     5341 atcagcagtt tctgatcgtc gctttccatc agcatatggt caacggtcgc cccaggcggc
     5401 aacgttaatt tgccggtgag tggttcgccc tgaccacgcg ccgacggcag cgtaatcggg
     5461 tcgatggcat agctacgacc ggtggaatca acaaacacta ccggttggtt gctcttacct
     5521 ttcaccgccg ctttgaagct atcacccgct ttataattca ggcccggcgc gtcgatatca
     5581 tggcctttag cgctgcgtac ccagcccatc tgcgacagca caatggtgac aggttcagac
     5641 ggcagcatgt cgtgctcgct catcgctttc gcttcttcgc gttcctgcaa cggcgaacga
     5701 cgatcgtcac cgtaggcttg cgcgtctgcc tgcagttctt tcttcagcag gttattcatt
     5761 ttacgctcgg aaaccaaaat gccctgcaac tggtcgcgct ctttttccag ctcactctgc
     5821 tcaccgcgaa tcttcatctc ttccagtttg gcaagatgac gcagtttcag ttcgaggatc
     5881 gcttccgcct gggtttccgt aaggccaaac cgcgacatca gcgccggttt cggttcatct
     5941 tcgttacgaa tgatctcaat cacttcgtcg atgttgagaa acgccaccag caaaccttcc
     6001 aggatatgca ggcgcttgag gactttctcc agacgatagt tcagtcggcg gcgcacggta
     6061 tcgcgacgga acaccagcca ttcggagagg atttccagca ggtttttcac cgcaggacga
     6121 ccatccagac cgatcatatt gaggttaatg cgatagctct tttccagatc ggtggtagcg
     6181 aagaggtggt tcatcacctg atccatatcc acgcggttgg aacgcggcac aatcaccaga
     6241 cgggtcgggt tctcgtggtc agattcatcg cgcagatcgt caaccatcgg cagctttttg
     6301 ttgcgcattt gcgcagcaat ttgctccagt acgcgcgcac ctgaaacctg atgcggcaat
     6361 gcgctgataa ccaccgcgcc atcttctttc ttccacaccg cgcgcatacg cactgaacca
     6421 cgtccgttct cgtagatttt acggatctcg gcgcgcgaag tgataatttc cgcttcagtc
     6481 ggataatccg gcccctgcac gatatccagc agctgatcga gcgtggtttt cggctggtcg
     6541 attaatgcga ttgccgcctg agctacttca cgcaggttat gcggtggaat atcggtcgcc
     6601 atgccgacgg caataccggt ggtgccgtta agcaaaatgt ttggcagacg ggcaggcagc
     6661 attttcggct cctgcaaagt gccgtcgaag tttggcaccc agtcagccgt cccctgcccc
     6721 agctcgctca atagcagctc ggaatatttc gacaaccggg attcggtgta acgcattgcc
     6781 gcgaacgatt tcggatcgtc cggcgcgccc cagttcccct gaccatcaac cagcggataa
     6841 cggtaagaga acggctgcgc catcaggacc atcgcttcat aacaggcgct atcgccgtgc
     6901 ggatggtatt tacccagtac gtcaccgacg gtacgggccg attttttaaa tttggcgctg
     6961 gcattcaggc ccagttcaga catcgcatac acaatgcggc gctgaacagg tttaagacca
     7021 tcgccaataa acggcaacgc acggtccatg atcacgtaca tggagtagtt taagtaggcg
     7081 ttttccgtaa attcatgtag cgcaaggcgc tctgccatat cgctcattaa ttctgattcc
     7141 tcaacttatt cgccagcctt caaaggggca atattgccgg agatactaca ttatctgccg
     7201 cgtcgagtca caggagatca gcgtgaatag cgccgccgga cgtgctccga cggcgataaa
     7261 ggcatcaatg tgccttgata tacaactctt tgctgtagac ttgatcggca tagagggcag
     7321 cacaaggttg cgcccatgcc acaccactcg gcatgggggt ccgctccggg cgattcgaga
     7381 agttgaggtt atgcgagtcc agggaagcct aaagcatcaa agtagtcgac tgtaagtata
     7441 cggttcagcc cagtttagct gtgtctccac cagtgccccg cgcctcctgc cataagtgcg
     7501 gcttgctcat ggataccccc gagacggctt acggcgcacc ggataataaa tttcgcgtat
     7561 acatggtatt ccttaccgga gaaattataa gcccaacaac aatacgcctg tggcattgtt
     7621 cgctcaaact tatcgcgagt gatttggctc acactccggt aaagattccc catcacgcta
     7681 acggcacata aacatccgtt tccagtcgct gttctgtcat accttcggca agattggtgt
     7741 agtgaaacag aatcggtgct ttacgcattt tctcgccgct tgcaggcagc cagtggcgaa
     7801 tgatgcccca taccgtgtgt gaaatatcgt ccagctcgcc aacgtggcgg gccacggcat
     7861 aacgtccacc ggtaagttca ccattgctca caccataacg attatcggga atcggttcgc
     7921 taacgctgcc gcagatatca aagcgaaacg ctttcggtgc ggtggtggca gggtcgtccc
     7981 aggcgacgcc aaaagtctgg ctttggttaa caggagaaag ccccgtctct ttacgccaca
     8041 tgataaattt cgccacactg tagttgagca actcagggct acagcggtgc ggcaacatcg
     8101 ccacagggat tgatgggaaa tcgataatgt ttacatccag tgtcaggttt gtcattttgc
     8161 ctccctgcga aattattccc gggaacgcgt cccgggagcg gtaacaatta cggatttact
     8221 ttgcggatct gtttgacgtc aatttcaaca gaattccagt ctttatcgac ttccccctga
     8281 atctcaaccg tatctttcgg cgtcaccgtc acaccgttcc agcgtttgtg gtcgatatca
     8341 acattgatag taccgctggc atctttaaac acgtagagat cgtcagagat gcgttcaacg
     8401 atattgccgc gcagggttac ccaggtgtcg tcacgccggg attttgcgct ttctacagtc
     8461 gttacgctgc cgttcggccc ctggaatcct ccggcctgac tttgcgttgc cgatgggcca
     8521 gaaaaaccgc cctgctctgc tgccatcacc ggtgcactgc acagggccat tactgcgatt
     8581 actgctgcga attttttcat gtttattact ccctttaatg tctgtttccg agcatttaac
     8641 aagatagtcc ttaacaactt cttaagggaa aaaaataaaa tttaatgctg tacagagcgc
     8701 gttacaacac ggtttactgg cagcaaatac ggttatcgca gggatgaaaa aatgcgaatt
     8761 ttactgatag aagatgacat gctgattggc gacggcatca aaactggcct tagtaaaatg
     8821 ggttttagtg tcgactggtt tacacaaggt cgtcagggaa aagaggcgct ttatagcgca
     8881 ccttatgatg cggtgatcct ggatttaacc ttaccaggca tggatggtcg cgatattttg
     8941 cgcgaatggc gagagaaagg tcagcgtgag ccggtactga tcctgaccgc gcgtgatgcg
     9001 ttagcggaac gtgtagaagg gctgcgtctg ggagctgacg attatctgtg taaacctttt
     9061 gcgttgatag aagtcgccgc caggctggag gctctgatgc gccgaaccaa cggccaggcc
     9121 agcaacgagc tgcgccacgg taacgtcatg ctcgaccccg gcaaacgtat cgccacgctg
     9181 gctagcgaac ccttaacact gaaaccaaaa gaatttgccc tgctggaatt actgatgcgt
     9241 aacgctggtc gggtactgcc gcgcaaactg attgaagaga aactgtatac ctgggacgaa
     9301 gaggtcacca gtaatgccgt tgaagtgcat gtgcatcatc tgcgacgcaa actcggtagt
     9361 gattttattc gtaccgtgca tggtattggc tacacattag gtgagaaatg aaatttaccc
     9421 aacgtcttag tctgcgcgtc aggctgacgc taatcttttt aattctggcc tcggtgacct
     9481 ggctgctttc cagctttgtc gcctggaaac aaacaacgga taacgtcgat gaattgttcg
     9541 acacccaact gatgctgttt gccaagcggt taagtacgct cgatctcaac gaaatcaacg
     9601 cggcggatcg catggcacag acgccaaata aattaaaaca cggtcatgtt gatgacgatg
     9661 cgctgacctt tgccatcttt acccacgacg gcagaatggt ccttaatgat agcgataacg
     9721 gagaagatat tccctatagc tatcaacggg aaggttttgc tgacgggcaa ctggtcggtg
     9781 aagacgatcc ttggcgtttt gtctggatga cctcacctga tggcaaatat cgcatcgttg
     9841 ttggccagga atgggaatac cgtgaagaca tggcgctggc gattgttgcc gggcaattga
     9901 tcccgtggct ggtcgcactg ccgattatgt taatcatcat gatggtacta ctgggtcgtg
     9961 aactcgcgcc gctgaacaaa ctggcgctgg cactacgtat gcgtgaccct gactcggaaa
    10021 aaccactaaa cgcgactggc gtacccagcg aagtgcgacc actggttgag tcgctaaatc
    10081 aactgttcgc ccgcacacat gcgatgatgg ttcgagaacg acgctttacc tccgatgcag
    10141 ctcacgaact acgtagcccg ttaacagcgc tgaaagtgca aaccgaagtt gcgcagctct
    10201 ctgacgatga tccgcaggca cggaaaaaag cactgctcca attacattcc gggatcgatc
    10261 gcgctactcg tctggttgat caactgctca cgctatcgcg gctggactca ctggataacc
    10321 ttcaggacgt cgcggagatc ccgcttgaag atctcctgca atcgtcggtg atggatattt
    10381 accacacggc gcagcaggcg aaaattgacg tgcgactgac actcaatgtc cagggcatca
    10441 aacgcaccgg acaaccgcta ttgctaagtt tgttggtgcg aaatttgctg gataacgccg
    10501 tgcgttacag tccacagggc agcgtggtgg acgtcacgct gaatgccgat aatttcatcg
    10561 tgagggataa cggccccggt gtgacaccag aggcactggc gcgaattggc gaacgcttct
    10621 atcgcccctc cggacaaacc gctaccggca gtggacttgg gctatcgatt gtccagcgaa
    10681 tcgccaagct gcatggcatg aatgttgagt ttgggaatgc ggaacaaggt ggatttgagg
    10741 cgaaagtaag ctggtaaggg taagactttt gctaaattcg caaaagactt tgcacatttt
    10801 gctaatttca ccgtaccgct ctgtgacgta ctatagtcgg caaacgtctc accttgaggt
    10861 taaaaaatga gcaacattct gattatcaac ggcgcgaaaa aattcgccca ctccaatggt
    10921 caactgaatg acaccctgac cgaagtcgcg gatggcacac tgcgcgacct cgggcatgat
    10981 gttcgcatcg ttcgcgccga cagcgactac gatgtcaaag cggaagtaca aaactttctc
    11041 tgggctgatg tggtgatctg gcagatgcca ggctggtgga tgggcgcgcc gtggacagtg
    11101 aaaaaataca ttgatgatgt attcaccgaa ggtcacggga cgctgtatgc cagcgatggc
    11161 cgtacccgca aagatccgtc aaaaaaatac ggttccggcg gcctggtaca gggcaaaaaa
    11221 tatatgcttt ctctgacctg gaacgcacca atggaagcct tcaccgaaaa agatcaattc
    11281 ttccacggcg ttggcgtcga cggtgtgtat ctgccgttcc ataaagcaaa ccaattcctt
    11341 ggcatggaac cgctgccgac atttatcgct aatgacgtga taaaaatgcc tgatgttccc
    11401 cgctatactg aagaatatcg caagcatctt gtggaaattt ttggttaact agagctcagg
    11461 ctttagaagg agttaaccat gcttaccgta atcgcagaaa tccgtactcg tcctggtcaa
    11521 catcaccgtc aggcggtatt ggatcagttt gctaaaatcg ttccaaccgt actgaaagaa
    11581 gaaggttgcc acggctatgc gccaatggtg gattgcgctg ctggcgtgag tttccagtct
    11641 atggcaccgg attctatcgt gatgattgag cagtgggaaa gcatcgcgca ccttgaagcg
    11701 catctgcaaa ccccgcacat gaaggcgtac agcgaagccg taaaaggtga cgtgctggag
    11761 atgaatattc gtattctgca gccagggatt taatcctgcc ttgtttgccc ggccatcctg
    11821 accgggcaat gttctttcct ttaaacctca atctccgcca tgtcgccttt ctcttgcaac
    11881 cagttgcggc gatcttccga gcgtttcttc gccagtagca tgtccatcat cgcgtcagta
    11941 cgctgatcgt cttcatcatc gatagtcaac tgcaccagac ggcgagtgtt cggatcaagc
    12001 gtggtttcgc gcaattgcat cgggttcatt tcccccagac ctttaaaacg ctggacgttc
    12061 ggcttgcctt tcttgcgttt taattgctca agtacgccct ctttctcttc ttccgtcagc
    12121 gcgtaataaa cctctttccc gagatcaata cggtagagcg gtggcagtgc gacgtaaacg
    12181 tgaccgtgtt tcaccaacgc gcggaagtgt tttacaaaca aagcgcagag cagcgtggca
    12241 atgtgcagac catcggagtc agcatccgcc aggatacaga tcttgccgta acgaagctgg
    12301 ctcaaatcgt cgctgtcagg atcgataccg atcgctaccg aaatatcgtg cacttcctgc
    12361 gaagccagca cttcgtcgga agagacttcc caggtgttaa ggatcttacc tttcagtggc
    12421 atgatcgcct gatattcgcg atcgcgcgcc tgcttggcag atccgcctgc ggagtcacct
    12481 tccacaagaa acagttcggt gcggttaagg tcctgcgcgg tacagtcagc cagtttgcca
    12541 ggcagcgccg gaccgctggt cagcttttta cgcaccactt ttttagccgc acgcatacga
    12601 cgctgggcgc tggaaatcgc catctctgcc agcaactccg ccgcctgaac gttctggttc
    12661 agccacagga taaaggcatc tttcaccacg ccagaaacga atgccgcgca ctgacgcgaa
    12721 gagagacgct ctttggtctg cccggcaaac tgcggatcct gcatttttac tgacagcaca
    12781 taggcgcagc gatcccagat atcttccgcc gacagcttta caccgcgcgg cagaatgttg
    12841 cggtattcac agaactcacg catcgcgtcc agcaggccct gacgcagacc attaacatgg
    12901 gtaccgccct gcatcgttgg gatcaggttg acgtagcttt cggtcagcag ttcaccgcct
    12961 tccggcagcc acagtagcgc ccagtccacc gcttcagtat cgccagcgaa attaccgata
    13021 aacggttttt ctggcagcgt cggtaaaccg tttaccgctt ccgccaggta atcattcaga
    13081 ccgtcctgat agcaccagcg ctgttcggtg ttgttgatct catctttaaa ggtaatctca
    13141 acgccggggc acagtactgc tttggctttc agcacatgcg tcaggcgtga aacagaaaaa
    13201 cgcgggctat cgaagaaggt ttcatccggc cagaaatgga cgctggttcc ggtattgcgt
    13261 ttaccgcaag tgccgacaac ctgtaaatcc tgcacctttt cgccattttc aaaggcgatg
    13321 ttataaatct gaccatcgcg gcgcacgtta acttctacgc gcttcgacag ggcgttaacc
    13381 accgaaatcc ccacgccatg caggccgcca gagaactggt aatttttgtt agagaattta
    13441 ccgcctgcat gcagacggca aagaatcagt tcaaccgccg gtacaccctc ttccgggtga
    13501 atatccaccg gcatcccgcg cccatcgtca ataacttcta acgactggtc agcatgtaaa
    13561 ataacgtcca cgcgttttgc gtgacccgcc agtgcttcat ccacactgtt atcaatgact
    13621 tcttgcccca aatggttagg gcgagtggta tcggtataca tccccggacg gcggcgaacc
    13681 ggctcaagcc cggtgagtac ctcaatggca tcagcgttat aagtttgcgt catggtttaa
    13741 gttagtaatt cgagttgatc gtcagagatg gtgcagacca agaaaatcga cgatcgggtt
    13801 gaaataatct tcgaagcccg tgaatgcgtg gttgccgcct tctatgacag tctggcggca
    13861 ggaagcgtag tacgccaccg cctggcggta atccagcact tcatctcccg tctgttgcag
    13921 cagccagatc aaatccggcg cttccagcgg gtcaatctgc atgactttaa gatcgtaaat
    13981 atggcgtgac tctagcacat attgctgccc ggtgtagggg ttctcgttct gaccgagata
    14041 gtccgtcagc agttcaaacg ggcgcaccgc cgggtttacc accactgcgg gcagcataaa
    14101 acattgtgac aaccaggtgg cgtaatatcc ccccagtgac gaaccgacaa tacccagcga
    14161 atcgccgcca tgttccagga caatggattc cagcagctct gccgcgtcgg aaggatacgg
    14221 cggcaactgc ggaatgatca tctcaacgtc agggtgatgt tccgccagcc agttttttaa
    14281 caagctcgct tttgcagagc gcggcgagct gttgaaaccg tgtaaataaa gaagcgtaga
    14341 catcagtagc cttctgaagc ggtatcaggt tggaaacgtg tgtccgccag gcgatgcacc
    14401 tcggtggtca gcgtgccatc agcatgtaac tcgagagtac gccagccggg cgcgatggta
    14461 tccagcgtaa agttggaaca gtgcggctta aactgcacac aggtcgacgg cgttgccagc
    14521 aggcggcgac cgttccagtc gagatccagc tcctgatgaa tatgaccgca cagcaagtat
    14581 ttgacgtgcg gaaacttcgc cagcacggta tccagttcgc ccgcgttacg cagactgtgt
    14641 tgatcgagcc aactacaacc cgcaggtagc ggatgatgat gcagcagcag caacgtatgg
    14701 cgttctggcg catcggccag tttacgttcc agccactcaa gctgaaactc gctcagctca
    14761 ccgtgcggca cgccaaacac ctggctatcc agcaacagga tttgccattg ctcaccaata
    14821 aacacgcgct tcgccgggga gatacccgca tcctgtaacg cgctgtacat cgcgggctgg
    14881 aaatcgtggt tgcccggcag ccagacgcag ggcgcacgaa aacttgcgat gccttcagcg
    14941 aaatgctgat aggccgcaga ggattgatcc tgcgctaaat cacctgtcgc gacaatcagg
    15001 tcgaattcgt gctgatgtgg acgaatcgcc tccagcaccg cctggtagct ttcccaggtg
    15061 tttaccccta acagggcttc gtgcttttgt gcaaacaggt gagtatcggt aatttgtaaa
    15121 atcctgactc tggcctcacc agccagagga agggttaaca ggctttccaa atggtgtcct
    15181 taggtttcac gacgctagta aaccggaatc gccatcgctc catgtgctaa acagtatcgc
    15241 aaccagtccg ctaaaaactg gttaatttga tgcttttcgt cgcgttgatg caacttttta
    15301 ttaggataat cataccgcgc tttgaagcga aaaatctgct ggcttgaaca cacttcagcc
    15361 accatcgcgt catgatacag acgcaccgtc attgacggaa ggctccagta actgatcgcg
    15421 ggcgcagtct gttctattgt caccaaggta gtgtatcggg tcgattccac agtcgtcagc
    15481 cgatattgtg cgtttgccac ctgatagctt acagtttcgc cgggtgcgtc attgcgcggt
    15541 aacaaacggc gcaattgtga aaagttcatc tcgcacaggc gcatcatttc aggaaagtca
    15601 ggtgtgtaac gcttcattta tgcccactca ttttttaacg cttggtggtg cagctgcagc
    15661 cattgcaaag cgatgaccga cgctgcgttg tcgattttcc cctcttctac ccactggtat
    15721 gcctgttccc ggcttaccac atgaacgcga atatcttcgt tttcatcagc cagaccatga
    15781 ataccgcttg cggtcgtggc gtccacttcg cccaccataa ttgacgaacg ctcactggtg
    15841 ccccccgggc ttgccaggaa acttaacacc ggtttggtcc gtttgactat cagccccgcc
    15901 tcttcaatcg cttcgcgacg ggcaacatct tccacacttt caccctcttc aatcatcccg
    15961 gcaaccatct ccagtagcca gggggtttcg ctagtgtcgt acgcggcaat tcgaatctgc
    16021 tcaatcagca caacttcatc acgcactggg tcaaagggta gcaagactgc ggcgtgaccg
    16081 cgctcaaaaa tttcccgccg cacctcatga ctcatttgcc cgttgaatag actatgacga
    16141 aatctataaa gatctaatga aaaaaagccg cgataaagtg tttctcgtgc aataatttct
    16201 acatcgtttt tgccaaatgt aacgggcagg ttgtctggct taagcattgt taatgtcctg
    16261 gcactaatag tgaattaaat gtgaatttca gcgacgtttg actgccgttt gagcagtcat
    16321 gtgttaaatt gaggcacatt aacgccctat ggcacgtaac gccaaccttt tgcggtagcg
    16381 gcttctgcta gaatccgcaa taattttaca gtttgatcgc gctaaatact gcttcaccac
    16441 aaggaatgca aatgaagaaa ttgctcccca ttcttatcgg cctgagcctt tctgggttca
    16501 gttcgttgag ccaggccgag aacctgatgc aagtttatca gcaagcacgc cttagtaacc
    16561 cggaattgcg taagtctgcc gccgatcgtg atgctgcctt tgaaaaaatt aatgaagcgc
    16621 gcagtccatt actgccacag ctaggtttag gtgcagatta cacctatagc aacggctacc
    16681 gcgacgcgaa cggcatcaac tcgaacgcga ccagtgcgtc cctgcagtta actcaatcca
    16741 tttttgatat gtcgaaatgg cgtgcgttaa cgctgcagga aaaagcagca gggattcagg
    16801 acgtcacata tcagaccgat cagcaaacct tgatcctcaa caccgcgacc gcttatttca
    16861 acgtgttgaa tgctattgac gttctttcct atacacaggc acaaaaagaa gcgatctacc
    16921 gtcaattaga tcaaaccacc caacgtttta acgtgggcct ggtagcgatc accgacgtgc
    16981 agaacgcccg cgcgcagtac gataccgtgc tggcgaacga agtgaccgca cgtaataacc
    17041 ttgataacgc ggtagagcag ctgcgccaga tcaccggtaa ctactatccg gaactggcgg
    17101 cgctgaatgt cgaaaacttt aaaaccgaca aaccacagcc ggttaacgcg ctgctgaaag
    17161 aagccgaaaa acgcaacctg tcgctgttac aggcacgctt gagccaggac ctggcgcgcg
    17221 agcaaattcg ccaggcgcag gatggtcact taccgacgct ggatttaacg gcttctaccg
    17281 ggatttctga cacctcttat agcggttcga aaactcgtgg tgccgctggt acccagtatg
    17341 acgacagcaa tatgggccag aacaaagtgg gcctgagctt ctcgctgccg atttatcagg
    17401 gcggaatggt taactcgcag gtgaaacagg cccagtacaa ctttgttggt gccagcgagc
    17461 aactggaaag cgcgcatcgt agcatcgtgc aaaccgtacg ttcctccttc aacaacatta
    17521 atgcatctat cagtagcatt aacgcctaca aacaagccgt agtttccgct caaagctcat
    17581 tagacgcgat ggaagcgggc tactcggtcg gtacgcgtac cattgttgat gtgttggatg
    17641 caaccaccac gctgtacaac gctaagcaag agctggcaaa tgcgcgttat aactacctga
    17701 ttaatcagct gaatattaag tcagccctgg gtacgttgaa cgagcaggat ctgctggcac
    17761 tgaacaatgc gctgagcaaa ccggtttcca ctaatccgga aaacgttgcc ccgcaaacgc
    17821 cggaacagaa tgctattgct gatggttatg cgcctgatag cccggcaccc gtcgttcagc
    17881 aaacatccgc acgcactacc accagtaacg gtcataaccc tttccgtaac tgatgacgac
    17941 gacggggctt cggccccgtc tgaacgtaag acaacgtaaa gatacgggtt atctgccgca
    18001 ttcttccccc ttctcgcttc aatttcgacc agccatcctc tattctgatg ggtatttacc
    18061 actggtcccg gaagacaaaa atgaaacgga caaaatccat acgccacgca tcgttccgca
    18121 aaaactggag cgcacgccat ctgacaccag tcgctctcgc ggttgccact gtttttatgc
    18181 tggctagctg tgaaaagagt gatgaaacag tgtctctcta tcaaaatgct gacgactgtt
    18241 cagctgcaaa cccaggcaaa agcgccgaat gtaccaccgc gtacaacaat gcgctgaaag
    18301 aagccgaacg tactgcgccg aaatacgcca cccgtgaaga ctgtgttgct gaatttggtg
    18361 aaggtcagtg ccagcaggca ccagcccagg ctggcatggc accagaaaac caggcgcagg
    18421 cccagcaatc cagcgggagt ttctggatgc cgctgatggc cggttacatg atggggcgtc
    18481 tgatgggcgg cggcgcggga tttgcacagc agccgctgtt ctcctcgaaa aacccagcca
    18541 gcccggctta cggtaaatat accgacgcga cgggtaaaaa ctatggcgca gcccagccag
    18601 gccgcaccat gaccgtaccg aagacagcca tggcaccaaa accggcgacc actactaccg
    18661 ttacccgtgg cggttttggt gaatctgttg ccaaacaaag cactatgcag cgtagcgcaa
    18721 ccggcacctc ttctcgttca atgggtggct gataccgatg gaaagagtca gtattaccga
    18781 gcgcccggac tggcgtgaaa aagcccacga atacggtttc aattttcaca ccatgtacgg
    18841 cgagccgtac tggtgtgaag atgcttacta caagttgccc ctcgcccagg ttgaaaagct
    18901 ggaagaagtc accgccgaac tgcaccagat gtgcctgaaa gtggtggaaa aagtgatcgc
    18961 cagcgatgag ctgatgacca aattccgcat tccaaaacac acctggagtt ttgtgcgtca
    19021 gtcatggctg actcaccagc catcgcttta ttcgcgtctt gatctggcat gggatggcac
    19081 tggcgaacct aaactgctgg aaaataacgc cgatacacca acgtcactat acgaggcggc
    19141 gttctttcag tggatctggc tggaagatca gcttaacgcc ggtaacttgc cggagggcag
    19201 cgaccagttt aacagtctgc aagaaaagct aatcgatcgc tttgtcgagt tgcgtgaaca
    19261 gtatggcttc cagttgctgc atctcacctg ctgtcgcgac acggtggaag atcgcggaac
    19321 cattcagtat ttgcaggact gcgcgacgga agctgaaatc gctaccgagt tcctctacat
    19381 tgacgatatc gggttaggtg aaaaaggtca gttcacggat ttacaggatc aggtaatttc
    19441 caacctgttc aagctgtatc catgggaatt tatgttgcgt gagatgttct ccaccaagct
    19501 ggaggatgca ggcgtacgct ggctggaacc ggcgtggaag agcattatct ccaacaaagc
    19561 gcttctaccg ctactgtggg agatgttccc gaatcacccg aacctgctgc ccgcttattt
    19621 tgcggaagat gatcatccgc aaatggaaaa atatgtggtt aaaccgatct tctcccgtga
    19681 aggcgcaaac gtgtcgatca ttgagaacgg caaaaccatt gaagcagcgg aaggtccgta
    19741 tggcgaagaa gggatgattg ttcagcaatt ccatccgtta ccgaaattcg gcgacagcta
    19801 tatgctgatt ggtagctggc tggtgaacga tcaacccgcc ggaattggca ttcgtgaaga
    19861 ccgtgcattg atcacccagg atatgtctcg gttttatcca catatttttg ttgagtaatc
    19921 aatgatgccg gatggcattc gccatccggt aattgttaac ctatctgcac cgacagcata
    19981 ctcaggctgc ccatttctat accatcgacc ggaatggtaa ttggctcctg cccatcccac
    20041 gcacctaaga catacaacaa cggcagatag tgctccggcg ttgggttcga taacgcgcca
    20101 ccttcatggt cgaggtaatt caccagagga tgctgctcta ccgccccttg ccacgtcaga
    20161 ttcgctttca catactcatt aaacgacatc gcccaaggat atggtgaact atcaccgtgc
    20221 cacttcactg tacgcaggtt atgcaccacg ttgccactgg cgaccaacat tattccttca
    20281 tctcgcagcg ctgccagttt gcgccccatt tcgaaatgcc aggcggcagg tttgctactg
    20341 tcgatactca actgcaccat cgggatatcg gcgtcaggat acatcttaat cagcacgccc
    20401 caggaaccgt ggtcaaagcc cctggcttct ttatccagcg tcaccgggac cggcgctaac
    20461 agctcaacca gatgctgtgc cagcacaggc gaacccggag caggataatg cgtatcgtac
    20521 agcgcctgcg ggaagccacc aaagtcatga atcgtgggcg gcgtctccat cgcggtcact
    20581 cctgttccac gggtaaacca gtgagccgaa accaccacaa tcgcttgcgg gcgtggcaat
    20641 gtcatcccca acttctgcca gctgcgggta tacaaattat cttccagcac gttcatcgga
    20701 ctaccgtgac ctaaaaacaa tgctggcata cgtgttgaag acatgatgat atccttaact
    20761 aagggtgtca ttttgatatc ctcacaatac gcttgttcgg cggagtaaga acccggataa
    20821 caatgatgat gatcatcagt tattttgacg atctgcctga aggtgaagat ttataaggag
    20881 ttgtcgatgt cagtacctct cattctgacc atactggcgg gggcagccac gtttattggc
    20941 gcgtttctcg gcgttctcgg acaaaaaccc tcgaaccgct tactggcgtt ttcgctaggt
    21001 tttgcggcgg ggatcatgtt gctcatctca ttaatggaaa tgcttcctgc cgcactagca
    21061 gctgaaggaa tatcgcctgt gttgggttat ggaatgttta tcttcggtct gcttggctac
    21121 tttggcctgg accgcatgtt gccgcatgcg catccgcagg atttaatgca aaaatcggtg
    21181 cagccgttgc caaaatcgat caagcgcaca gccattctgc tcactctcgg catcagtctg
    21241 cataacttcc cggaagggat tgccaccttt gtcacggcga gcagcaacct ggagctggga
    21301 tttggcatcg cactggccgt cgcgttgcac aatatccctg aaggtctggc agtggcaggc
    21361 ccggtttatg cggcaacggg gtctaaacgc accgcgattc tgtgggcggg gatttctgga
    21421 ctagcagaaa ttcttggtgg tgtgctggcg tggttaatcc tcggtagcat gatttccccg
    21481 gtggtcatgg cggcggttgc aggaattatg gtggcgctct cggttgatga attaatgccg
    21541 ctcgccaaag agattgaccc taataataac cccagctatg gcgtactatg tggaatgtca
    21601 gtgatgggat tcagtttagt gctgctacaa acggcgggaa ttggttaaaa acaacatcag
    21661 aagttgtcca gcacatggac aacttctgcc agcttcacga aagccttatt ctaccttttc
    21721 ggctgtctct tctctcgtac tgtttaagta tttgttccgc gcttcaagca gtgcgtctct
    21781 gtcctggcga aacgcccgac aataacgttt caaatgcagg aaataaccca ccacaaccag
    21841 agcaatcaat acaatccagt accaggcgat aaacatcctt tacccttaat atttaacaat
    21901 actaaacatt tagcgcataa atttcacata tcctttttcg gatatattca tatggtcgca
    21961 taataacgga acaattatat gattttgatc ataatgaaaa agaatgcctg atattaatga
    22021 aattttctca tagaaagaga agcggaatta acatcttgca tagcagggca aaataaaaac
    22081 cgaagccagc tacaacttcg gtttcttgat taaggcagta attaagcagc ggttttcagc
    22141 tggctttacg ctcatgtgcc tgacggtatg ccaccaggtc ttcaatagtc acgagcgcca
    22201 tattgtgttt attggcaaac tcaatgcact ctggtgcacg cgccatcgtg ccatcgtcat
    22261 tagtcagctc acacagcaca ccagccggtt taaagcctgc cagcgtcatc aaatcaatag
    22321 tcgcttcagt atgaccgcca cgcgtcagta caccacctgc ctgcgcgcga agtgggaaaa
    22381 cgtggcccgg gcgattcaga tcagaaggtt ttgcgccatc ggcaatcgct gcgcgaacgg
    22441 tcgtaatacg atcagcggca gaaacaccgg tagtcacacc ttcagccgct tcaatggtca
    22501 cggtaaaacc ggtgccatag gcgctggtgt tattttctac catcattggc agatcaagtt
    22561 gtttacggcg atcttcagtg atgcacaggc aaacaatacc gctaccgtgg cgaatggtca
    22621 gcgccatctg ctcaacggtc atggtttctg ccgggaagat catatcgcct tcgttttcac
    22681 ggtcttcatc atcaagcacc attacaccgc gtccttcacg cagcgcagcc agtgcatttt
    22741 caacacgttc gaaaggcgta ccaaaagagg aaagtagcgt ctgattcatg gtaaaaaaaa
    22801 ctcactaaaa ttatggttac cagaatcagg gcagtcttag gagtggcggc atatagccaa
    22861 aataacgtga gcgggtccat gcccgacaga atcgttactc tctcccatcc ggactctaac
    22921 cgtcggcccc ggaattacac cggatctgct gtcctttgag ttcgcaccca aagcgctcgc
    22981 gggctttcaa ctgagttgat ttaccgccgg tggggaattt cgccccgccc tgagaataag
    23041 cggattcact ataacgctaa tgattagcgg cagcaacgca tagcttcaca taattctggt
    23101 ttatgactta cccttatcgc actacaatgg tactcaacac ctatcagtac agggaaacta
    23161 caatgattga cccgaaaaaa attgagcaaa tcgctcgcca agttcacgaa tcaatgccta
    23221 aaggaatcag ggagttcggg gaagatgtgg agaaaaaaat ccgccaaacc ctacaagctc
    23281 agctgacgcg cctcgacctt gtaagccgtg aagagttcga cgtccaaacg caagtcctgt
    23341 tacggactcg tgagaaactg gcgctgcttg aacaaagaat gagcgaactg gaaaatcgca
    23401 gtactgagat taaaaagcag ccagatccag agactctccc cccaacgctg taaacatttg
    23461 tctttaatgc actgtaaatt atgaattaat cttctaattt acagtgcttt ctattacctt
    23521 atcgcttaat tccattcaga atatcaccac aaaaatgaat gagtgcaatt gaaaatatta
    23581 ttgttatgta tttttttaag ttttacttaa tccatattta gataaactaa tttcataaaa
    23641 cccgaaaagt aaaatataat atttgaatga ttagcaatcc ttaaataaca gttactaatc
    23701 attcattttc tacttatatt tatataaagg aatattatgt ctgcttttaa aaagtcactt
    23761 cttgttgctg gcgtagcaat gattctttcc aataacgtat ttgctgacga aggtcacggc
    23821 attgttaaat ttaaaggtga agttatctct gctccatgtt caattaaacc aggtgacgaa
    23881 gacttaactg taaatctggg tgaagtagca gataccgttc tgaaaagcga ccagaaatct
    23941 ttggctgagc ctttcactat tcacctgcaa gactgcatgt tgagccaggg tggaaccact
    24001 tattcaaaag cgaaggttac tttcaccaca gcgaatacta tgacgggtca gactgacctg
    24061 ctgaaaaaca ccaaagaaac tgaaatcggt ggtgccacag gcgttggcgt acgtattctg
    24121 aatagccaga gcggcgaagt gactttaggt actccggtag taattacatt caacaatact
    24181 aacagctatc aggaactgaa cttcaaagtt cgtatggaat ccccgggcaa agatgctacc
    24241 ccgggcaacg tttacgctca ggctgactat aagattgctt acgagtaatc acattaggcc
    24301 gggttcgccc ggccacatca ttaacggatt aatgataagt ggaacagatg tataaaaaat
    24361 taaaattaac cacaataagc gaattgatta aaaatattta ttgttcatta tccgttctca
    24421 tcattggttg tgcgtcagct tatgccgttg aattcaacaa agatttaatc gaagccgaag
    24481 atcgtgaaaa cgttaacctt tcccaatttg aaactgatgg ccaattaccc gtaggtaaat
    24541 actcattaaa cgctattatt aataataaaa ggacgccaat ccatctggac ctgcaatggg
    24601 tattaattga taaccaaact gcagtttgtc tgactccaga gcaattaaca ttattaggct
    24661 ttactgatga gattattgaa gaggctcagc aaaacctgaa cgatggttgt taccctatcg
    24721 aaaaagaaaa acaaattaca acttatctcg ataaagggaa aatgcaatta tccatatctg
    24781 cacctcaggc atggttaaaa tacaaagatg caaactggac gcctcctgaa ctttgggatc
    24841 atggtattgc tggggcattt cttgactaca atttatatgc ctctcattat gcaccacatc
    24901 agggcgataa ttcacaaaat ataagttcct atgggcaggc tggggttaat cttggggcct
    24961 ggcgcctgcg tactgattac cagtacgatc agtcatttaa caatggcaaa agccaggcga
    25021 acaacctgga ttttccgcgt atttatttgt ttcgcccaat cccagcaatt aatgcaaaac
    25081 taactatagg tcaatacgat actgaatcct ctattttcga ctctttccat ttttctggcg
    25141 tttcgttgaa aagcgatgag aatatgttgc cgcctgatct acgtggttac gcaccgcaaa
    25201 tcacgggtgt tgcacaaacg aatgcaaagg tcactgtctc acagaacaac cgtattattt
    25261 atcaagaaaa tgttcctcct ggcccatttg ctattactaa tttattcaat acattacagg
    25321 ggcaactgga cgtcaaggtt gaagaagagg acgggcaagt cacgcaatgg caagttgcat
    25381 ctaatagtat tccttatctg acgcgtaaag ggcagattcg ctacaccact gctatgggta
    25441 aaccgaccag cgttggtggt gattccttac aacaaccctt cttctggact ggtgaattct
    25501 catggggttg gctgaacaat gtatccctgc atggtggttc agttttaaca aaccgtgatt
    25561 atcaatctct ggctgccggc gttggcttta accttaactc attgggttca ttatcttttg
    25621 atgtcacacg atctgatact cagttgcata atcaggataa agaaacgggt tatagctacc
    25681 gcgctaacta ttcaaaacgt tttgaatcta ccggtagcca gctcactttc gctggttacc
    25741 gtttctctga taaaaacttt gtgacaatga atgaatatat caatgacact aaccattaca
    25801 cgaat
//
LOCUS       DADMJE010000044        25509 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.045, whole genome shotgun sequence.
ACCESSION   DADMJE010000044 DADMJE010000000
VERSION     DADMJE010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25509)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25509)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25509
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.045"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..183
                     /locus_tag="JN001_001651"
     CDS             <1..183
                     /locus_tag="JN001_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine:cation symporter family protein"
                     /protein_id="HAY9052917.1"
                     /translation="ACMAITNLTAILLLSPVVHTIASDYLRQRKLGVRPVFDPLRYPD
                     IGRQLSPDAWDDVSQE"
     gene            253..1029
                     /gene="yaaA"
                     /locus_tag="JN001_001652"
     CDS             253..1029
                     /gene="yaaA"
                     /locus_tag="JN001_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide stress protein YaaA"
                     /protein_id="HAY9052918.1"
                     /translation="MLILISPAKTLDYQSPLTTTRYTLPELLDNSQQLIHEARKLTPP
                     QISTLMRISDKLAGINAARFHDWQPDFTPANARQAILAFKGDVYTGLQAETFSEDDFD
                     FAQQHLRMLSGLYGVLRPLDLMQPYRLEMGIRLENARGKDLYQFWGDIITNKLNEALA
                     AQGDNVVINLASDEYFKSVKPKKLNAEIIKPVFLDEKNGKFKIISFYAKKARGLMSRF
                     IIENRLTKPEQLTGFNSEGYFFDEASSSNGELVFKRYEQR"
     gene            complement(1182..1478)
                     /locus_tag="JN001_001653"
     CDS             complement(1182..1478)
                     /locus_tag="JN001_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2502 domain-containing protein"
                     /protein_id="HAY9052919.1"
                     /translation="MKKMQSIVLALSLVLVAPMAAQAAEITLVPSVKLQIGNRDNRGY
                     YWDGGHWRDHGWWKQHYEWRGNRWHPHGPPPPPRHHKKAPHDHHGGHGPGKHHR"
     gene            complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JN001_001654"
     CDS             complement(1692..2978)
                     /gene="thrC"
                     /locus_tag="JN001_001654"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HAY9052920.1"
                     /translation="MKLYNLKDHNEQVSFAQAVTQGLGKNQGLFFPHDLPEFSLTEID
                     EMLKLDFVTRSAKILSAFIGDEIPQEILEERVRAAFAFPAPVANVESDVGCLELFHGP
                     TLAFKDFGGRFMAQMLTHIAGDKPVTILTATSGDTGAAVAHAFYGLPNVKVVILYPRG
                     KISPLQEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISR
                     LLAQICYYFEAVAQLPQEARNQLVVSVPSGNFGDLTAGLLAKSLGLPVKRFIAATNVN
                     DTVPRFLHDGQWSPKATQATLSNAMDVSQPNNWPRVEELFRRKIWQLKELGYAAVDDE
                     TTQQTMRELKELGYTSEPHAAVAYRALRDQLNPGEYGLFLGTAHPAKFKESVEAILGE
                     TLDLPKELAERADLPLLSHNLPADFAALRKLMMNHQ"
     gene            complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JN001_001655"
     CDS             complement(2979..3911)
                     /gene="thrB"
                     /locus_tag="JN001_001655"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HAY9052921.1"
                     /translation="MVKVYAPASSANMSVGFDVLGAAVTPVDGALLGDVVTVEAAETF
                     SLNNLGRFADKLPSEPRENIVYQCWERFCQELGKQIPVAMTLEKNMPIGSGLGSSACS
                     VVAALMAMNEHCGKPLNDTRLLALMGELEGRISGSIHYDNVAPCFLGGMQLMIEENDI
                     ISQQVPGFDEWLWVLAYPGIKVSTAEARAILPAQYRRQDCIAHGRHLAGFIHACYSRQ
                     PELAAKLMKDVIAEPYRERLLPGFRQARQAVAEIGAVASGISGSGPTLFALCDKPDTA
                     QRVADWLGKNYLQNQEGFVHICRLDTAGARVLEN"
     gene            complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JN001_001656"
     CDS             complement(3913..6375)
                     /gene="thrA"
                     /locus_tag="JN001_001656"
                     /EC_number="1.1.1.3"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aspartate kinase/homoserine
                     dehydrogenase I"
                     /protein_id="HAY9052922.1"
                     /translation="MRVLKFGGTSVANAERFLRVADILESNARQGQVATVLSAPAKIT
                     NHLVAMIEKTISGQDALPNISDAERIFAELLTGLAAAQPGFPLAQLKTFVDQEFAQIK
                     HVLHGISLLGQCPDSINAALICRGEKMSIAIMAGVLEARGHNVTVIDPVEKLLAVGHY
                     LESTVDIAESTRRIAASRIPADHMVLMAGFTSGNEKGELVVLGRNGSDYSAAVLAACL
                     RADCCEIWTDVDGVYTCDPRQVPDARLLKSMSYQEAMELSYFGAKVLHPRTITPIAQF
                     QIPCLIKNTGNPQAPGTLIGASRDEDELPVKGISNLNNMAMFSVSGPGMKGMVGMAAR
                     VFAAMSRARISVVLITQSSSEYSISFCVPQSDCVRAERAMQEEFYLELKEGLLEPLAV
                     TERLAIISVVGDGMRTLRGISAKFFAALARANINIVAIAQGSSERSISVVVNNDDATT
                     GVRVTHQMLFNTDQVIEVFVIGVGGVGGALLEQLKRQQSWLKNKHIDLRVCGVANSKA
                     LLTNVHGLNLENWQEELAQAKEPFNLGRLIRLVKEYHLLNPVIVDCTSSQAVADQYAD
                     FLREGFHVVTPNKKANTSSMDYYHLLRHAAEKSRRKFLYDTNVGAGLPVIENLQNLLN
                     AGDELMKFSGILSGSLSYIFGKLDEGMSFSEATTLAREMGYTEPDPRDDLSGMDVARK
                     LLILARETGRELELADIEIEPVLPAEFNAEGDVAAFMANLSQLDDLFAARVAKARDEG
                     KVLRYVGNIDEDGACRVKIAEVDGNDPLFKVKNGENALAFYSHYYQPLPLVLRGYGAG
                     NDVTAAGVFADLLRTLSWKLGV"
     gene            complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JN001_001657"
     CDS             complement(6455..6520)
                     /gene="thrL"
                     /locus_tag="JN001_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thr operon leader peptide"
                     /protein_id="HAY9052923.1"
                     /translation="MKRISTTITTTITITTGNGAG"
     gene            complement(6734..7420)
                     /locus_tag="JN001_001658"
     CDS             complement(6734..7420)
                     /locus_tag="JN001_001658"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY9052924.1"
                     /translation="MRITIILVAPARAENIGAAARAMKTMGFSELRIVDSQAHLEPAT
                     RWVAHGSGDIIDNIKVFPTLVESLHDVDFTVATTARSRAKYHYYATPVELVLLLEEKS
                     SWMSHAALVFGREDSGLTNEELALADVLTGVPMVADYPSLNLGQAVMVYCYQLATLIQ
                     QPTKSDTTADQHQLQALRERVMALLTTLAVADDIKLVDWLQQRLGLLEQRDTAMLHRL
                     LHDIEKNITK"
     gene            complement(7820..7960)
                     /locus_tag="JN001_001659"
     CDS             complement(7820..7960)
                     /locus_tag="JN001_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052925.1"
                     /translation="MTKVRNCVLDALSINVNNIISLVVGTFPQDPTVSKTAVILTILT
                     AT"
     gene            8056..8772
                     /gene="arcA"
                     /locus_tag="JN001_001660"
     CDS             8056..8772
                     /gene="arcA"
                     /locus_tag="JN001_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator ArcA"
                     /protein_id="HAY9052926.1"
                     /translation="MQTPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILS
                     EYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRDNEVDKILGLEIGADDYIT
                     KPFNPRELTIRARNLLSRTMNLGTVSEERRSVESYKFNGWELDINSRSLIGPDGEQYK
                     LPRSEFRAMLHFCENPGKIQSRAELLKKMTGRELKPHDRTVDVTIRRIRKHFESTPDT
                     PEIIATIHGEGYRFCGDLED"
     gene            complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JN001_001661"
     CDS             complement(8832..10184)
                     /gene="creD"
                     /locus_tag="JN001_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein CreD"
                     /protein_id="HAY9052927.1"
                     /translation="MLKSPLFWKMTTLFGAVLLLLIPIMLIRQVIVERADYRSDVEDA
                     IRQSTSGPQKLVGPLIAIPVTELYTVQEEDKTVERKRSFIHFWLPESLMVDGNQNVEE
                     RKIGIYTGQVWHSDLTLKADFDVSRLSELNAPNIILGKPFIVISVGDARGIGVVKAPE
                     VNGTALTIEPGTGLEQGGQGVHIPLPEGDWRKQNLQLNMALNLSGTGDLSVVPAGRNS
                     EMPLTSNWPHPSFLGDFLPAKREVSESGFQAQWQSSWFANNLGERFASGNDTGWENFP
                     AFSVAVTTPADQYQLTDWATKYAILLIALTFMAFFVFETLTAQRLHPMQYLLVGLSLV
                     MFYLLLLALSEHIGFTVAWIIASLIGALMNGIYLQAVLKGWRNSMLFTLALLLLDGVM
                     WGLLNSADSALLLGTSVLVVALAGMMFVTRNIDWYAFSLPKMKASKEVTMDDQLRIWK
                     "
     gene            complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JN001_001662"
     CDS             complement(10242..11666)
                     /gene="creC"
                     /locus_tag="JN001_001662"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     CreC"
                     /protein_id="HAY9052928.1"
                     /translation="MRIGMRLLLGYFLLVAVAAWFVLAIFVKEVKPGVRRATEGTLID
                     TATLLAELARPDLLSGDPTHGQLAQAFNQLQHRPFRANIGGINKVRNEYHVYMTDSQG
                     KVLFDSANKAVGQDYSRWNDVWLTLRGQYGARSTLQNPADPESSVMYVAAPIMDGSRL
                     IGVLSVGKPNAAMAPVIKRSERRILWASAILLGIALVIGAGMVWWINRSIARLTRYAD
                     SVTDNKPVPLPELGSSELRKLAQALESMRVKLEGKNYIEQYVYALTHELKSPLAAIRG
                     AAEILREGPPPEVVARFTDNILTQNARMQALVETLLRQARLENRQEVVLTVVDVAALF
                     RRVSEARTVQLAEKNITLHVMPTEVNVAAEPALLEQALGNLLDNAIDFTPESGRITLS
                     AEVDQEHVALKVLDTGSGIPDYALSRIFERFYSLPRANGQKSSGLGLAFVSEVARLFN
                     GEVTLRNVQEGGVLASLRLHRHFT"
     gene            complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JN001_001663"
     CDS             complement(11666..12355)
                     /gene="creB"
                     /locus_tag="JN001_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator CreB"
                     /protein_id="HAY9052929.1"
                     /translation="MQRETVWLVEDEQGIADTLVYMLQQEGFAVEVFERGLPVLDKAR
                     QLVPDVMILDVGLPDISGFELCSQLLALHPALPVLFLTARSEEVDRLLGLEIGADDYV
                     AKPFSPREVCARVRTLLRRVKKFSSPSPVIRIGHFELNEPAAQISWFDTPLTLTRYEF
                     LLLKTLLKSPGRVWSRQQLMDSVWEDAQDTYDRTVDTHIKTLHAKLRAINPDLSPINT
                     HRGMGYSLRGL"
     gene            complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JN001_001664"
     CDS             complement(12368..12841)
                     /gene="creA"
                     /locus_tag="JN001_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein CreA"
                     /protein_id="HAY9052930.1"
                     /translation="MKYKHLILSLSLIMLGPLAHAEEIGSVDTVFKMIGPDHKIVVEA
                     FDDPDVKNVTCYVSRAKTGGIKGGLGLAEDTSDAAISCQQVGPIELSDRIKNGKAQGE
                     VVFKKRTSLVFKSLQVVRFYDAKRNALAYLAYSDKVVEGSPKNAISAVPVMPWRQ"
     gene            13052..13921
                     /gene="robA"
                     /locus_tag="JN001_001665"
     CDS             13052..13921
                     /gene="robA"
                     /locus_tag="JN001_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     RobA"
                     /protein_id="HAY9052931.1"
                     /translation="MDQAGIIRDLLIWLEGHLDQPLSLDNVAAKAGYSKWHLQRMFKD
                     VTGHAIGAYIRARRLSKSAVALRLTARPILDIALQYRFDSQQTFTRAFKKQFAQTPAL
                     YRRSPEWSAFGIRPPLRLGEFTMPEHKFVTLEDTPLIGVTQSYSCSLEQISDFRHEMR
                     YQFWHDFLGNAPTIPPVLYGLNETRPSQDKDDEQEVFYTTALAQDQADGYVLTGHPVM
                     LQGGEYVMFTYEGLGTGVQEFILTVYGTCMPMLNLTRRKGQDIERYYPAEDAKAGDRP
                     INLRCELLIPIRR"
     gene            complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JN001_001666"
     CDS             complement(13918..14565)
                     /gene="gpmB"
                     /locus_tag="JN001_001666"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase GpmB"
                     /protein_id="HAY9052932.1"
                     /translation="MLQVYLVRHGETQWNAERRIQGQSDSPLTAKGEQQAMQVATRAK
                     ELGITHIISSDLGRTRRTAEIIAQACGCDIIFDSRLRELNMGVLEKRHIDSLTEEEEN
                     WRRQLVNGTVDGRIPEGESMQELSDRVNAALESCRDLPQGSRPLLVSHGIALGCLVST
                     ILGLPAWAARRLRLRNCSISRVDYQESLWLASGWVVETAGDISHLDAPALDELQR"
     gene            14617..15138
                     /gene="yjjX"
                     /locus_tag="JN001_001667"
     CDS             14617..15138
                     /gene="yjjX"
                     /locus_tag="JN001_001667"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001649724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-canonical purine NTP phosphatase"
                     /protein_id="HAY9052933.1"
                     /translation="MHQVVCATTNPAKIQAILQAFHEIFGEGSCHIASVAVESGVPEQ
                     PFGSEETRAGARNRVANARRLLPEADFWVAIEAGIDGDSTFSWVVIENTSQRGEARSA
                     TLPLPAVILQKVREGEALGPVMSRYTGIDEIGRKEGAIGVFTAGKLTRASVYHQAVIL
                     ALSPFHNAVYQAL"
     gene            complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JN001_001668"
     CDS             complement(15223..15549)
                     /gene="trpR"
                     /locus_tag="JN001_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon repressor"
                     /protein_id="HAY9052934.1"
                     /translation="MAQQSPYSAAMAEQRHQEWLRFVDLLKNAYQNDLHLPLLNLMLT
                     PDEREALGTRVRIVEELLRGEMSQRELKNELGAGIATITRGSNSLKAAPVELRQWLEE
                     VLLKSD"
     gene            complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JN001_001669"
     CDS             complement(15639..17576)
                     /gene="sltY"
                     /locus_tag="JN001_001669"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase"
                     /protein_id="HAY9052935.1"
                     /translation="MEKAKQVTWRLLAAGVCLLTVSSVARADSLDEQRSRYAQIKQAW
                     DNRQMDVVEQMMPGLKDYPLYPYLEYRQITDDLMNQPAVTVTNFVRANPTLPPARTLQ
                     SRFVNELARREDWRGLLAFSPEKPGTTEAQCNYYYAKWNTGQSEEAWQGAKELWLTGK
                     SQPNACDKLFSVWRASGKQDPLAYLERIRLAMKAGNTGLVTVLAGQMPADYQTIASAI
                     ISLANNPNTVLTFARTTGATDFTRQMAAVAFASVARQDAENARLMIPSLAQAQQLNED
                     QIQELRDIVAWRLMGNDVTDEQAKWRDDAIMRSQSTSLIERRVRMALGTGDRRGLNTW
                     LARLPMEAKEKDEWRYWQADLLLERGREAEAKEILHQLMQQRGFYPMVAAQRIGEEYE
                     LKIDKAPQNVDSALTQGPEMARVRELMYWNLDNTARSEWANLVKSKSKTEQAQLARYA
                     FNNQWWDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAW
                     NPKVKSPVGASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQ
                     QFGNNRIFSSAAYNAGPGRVRTWLGNSAGRIDAVAFVESIPFSETRGYVKNVLAYDAY
                     YRYFMGDKPTLMSATEWGRRY"
     gene            17787..19454
                     /gene="ettA"
                     /locus_tag="JN001_001670"
     CDS             17787..19454
                     /gene="ettA"
                     /locus_tag="JN001_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-dependent translational throttle protein
                     EttA"
                     /protein_id="HAY9052936.1"
                     /translation="MAQFVYTMHRVGKVVPPKRHILKNISLSFFPGAKIGVLGLNGAG
                     KSTLLRIMAGIDKDIEGEARPQPDIKIGYLPQEPQLNPEHTVRESIEEAVSEVVNALK
                     RLDEVYALYADPDADFDKLAAEQGRLEEIIQAHDGHNLNVQLERAADALRLPDWDAKI
                     ANLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLERFLHDFEGTVVAITHD
                     RYFLDNVAGWILELDRGEGIPWEGNYSSWLEQKDQRLAQEASQEAARRKSIEKELEWV
                     RQGTKGRQSKGKARLARFEELNSTEYQKRNETNELFIPPGPRLGDKVLEVSNLRKSYG
                     DRLLIDDLSFSIPKGAIVGIIGPNGAGKSTLFRMISGQEQPDSGTITLGETVKLASVD
                     QFRDSMDNSKTVWEEVSGGLDIMKIGNTEMPSRAYVGRFNFKGVDQGKRVGELSGGER
                     GRLHLAKLLQVGGNMLLLDEPTNDLDIETLRALENALLEFPGCAMVISHDRWFLDRIA
                     THILDYQDEGKVEFFEGNFTEYEEYKKRTLGADALEPKRIKYKRIAK"
     gene            complement(19761..20993)
                     /locus_tag="JN001_001671"
     CDS             complement(19761..20993)
                     /locus_tag="JN001_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418807.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional nicotinamide-nucleotide
                     adenylyltransferase/ribosylnicotinamide
                     kinase/transcriptional regulator NadR"
                     /protein_id="HAY9052937.1"
                     /translation="MSSFDYLKTAIKQQGCTLQQVADASGMTKGYLSQLLNAKIKSPS
                     AQKLEALHRFLGLEFPRQKKTIGVVFGKFYPLHTGHIYLIQRACSQVDELHIIMGFDD
                     TRDRALFEDSAMSQQPTVPDRLRWLLQTFKYQKNIRIHAFNEEGMEPYPHGWDVWSNG
                     IKKFMAEKGIQPDLIYTSEEADAPQYMEHLGIDTVLVDPKRTFMSISGAQIRENPFRY
                     WEYIPTEVKPFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDE
                     IALQYSDYDKIALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALI
                     DEYRFDLVILLENNTPWVADGLRSLGSSVDRKEFQNLLVEMLEENNIEFVRVEEDDYD
                     SRFLRCVELVREMMGEQR"
     gene            complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JN001_001672"
     CDS             complement(21014..22396)
                     /gene="radA"
                     /locus_tag="JN001_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001399683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HAY9052938.1"
                     /translation="MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPT
                     VARNERLSGYAGSAGVAKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGG
                     NPGAGKSTLLLQTLCKLAQQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIE
                     QICLIAEEEQPKLMVIDSIQVMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMV
                     GHVTKDGSLAGPKVLEHCIDCSVLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQG
                     LREVSNPSAIFLSRGDEVTSGSSVMVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLE
                     QNRLAILLAVLHRHGGLQMADQDVFVNVVGGVKVTETSADLALLLAMVSSLRDRPLPQ
                     DLVVFGEVGLAGEIRPVPSGQERISEAAKHGFRRAIVPAANVPKKAPEGMQIFGVKKL
                     SDALSVFDDL"
     gene            complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JN001_001673"
     CDS             complement(22445..23413)
                     /gene="serB"
                     /locus_tag="JN001_001673"
                     /EC_number="3.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine phosphatase"
                     /protein_id="HAY9052939.1"
                     /translation="MPNITWCDLPEDVSLWPGLPLSLSGDEVMPLDYHAGRSGWLLYG
                     RGLDKQRLTQYQSKLGAAMVIVAAWCVEDYQVIRLAGSLTARATRLAHEAQLDVAPLG
                     KIPHLRTPGLLVMDMDSTAIQIECIDEIAKLAGTGEMVAEVTERAMRGELDFTASLRS
                     RVATLKGADANILQQVRENLPLMPGLTQLVLKLETLGWKVAIASGGFTFFAEYLRDKL
                     RLTAVVANELEIMDGKFTGNVIGDIVDAQYKAKTLTRLAQEYEIPLAQTVAIGDGAND
                     LPMIKAAGLGIAYHAKPKVNAKAEVTIRHADLMGVFCILSGSLNQK"
     gene            23519..24163
                     /locus_tag="JN001_001674"
     CDS             23519..24163
                     /locus_tag="JN001_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtjB family periplasmic protein"
                     /protein_id="HAY9052940.1"
                     /translation="MARTKLKFRLHRAVIVLFCLALLVALMQGASWFSQNHQRQRNPQ
                     LEELARTLARQVTLNVAPLMRTDSPDEKRIQAILDQLTDESRILDAGVYDEQGDLIAR
                     SGESVEVRDRLALDGKKAGGYFNQQIVEPIAGKNGPLGYLRLTLDTHTLATEAQQVDN
                     TTNILRLMLLLSLAIGVVLTRTLLQGKRTRWQQSPFLLTASKPVPEEEESEKKE"
     gene            24191..25207
                     /gene="lplA"
                     /locus_tag="JN001_001675"
     CDS             24191..25207
                     /gene="lplA"
                     /locus_tag="JN001_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate--protein ligase LplA"
                     /protein_id="HAY9052941.1"
                     /translation="MSTLRLLISDSYDPWFNLAVEECIFRQMPATQRVLFLWRNADTV
                     VIGRAQNPWKECNTRRMEEDNVRLARRSSGGGAVFHDLGNTCFTFMAGKPEYDKTIST
                     SIVLNALNALGVSAEASGRNDLVVKTAEGDRKVSGSAYRETKDRGFHHGTLLLNADLS
                     RLANYLNPDKKKLAAKGITSVRSRVTNLTELLPGITHEQVCEAITKAFFAHYGERVEA
                     EIISPDKTPDLPNFAEIFARQSSWEWNFGQAPAFSHLLDERFSWGGVELHFDVEKGHI
                     TRAQVFTDSLNPAPLEALAGRLQGCLYRADMLQQECEALLVDFPDQEKELRELSTWIA
                     GAVR"
BASE COUNT         6131 a         7028 c         6336 g         6014 t
ORIGIN      
        1 gcctgcatgg ctattaccaa tttgaccgcc attttactgc tctcgcctgt ggttcatacc
       61 attgccagtg attatctacg ccagcgtaaa ctcggcgtgc gcccggtgtt tgatccgttg
      121 cgttatccgg atatcggtcg ccagctttct ccggacgcgt gggatgatgt ttcgcaggag
      181 taatcacaac tatcgatcaa ctcattctct ttttttgcta aagtcggcat aaatttcctg
      241 caaggactgg atatgctgat tcttatttca cctgcgaaaa cgcttgatta ccaaagcccg
      301 ttgaccacca cgcgctatac gctgccggag ctgttagaca attcccagca gttgatccat
      361 gaagcgcgga aactgacgcc tccgcagatt agcacgctga tgcgcatcag cgacaaactg
      421 gcgggtatca acgccgctcg ctttcatgac tggcagccag atttcacgcc ggcgaatgcc
      481 cgccaggcga ttctggcgtt taaaggtgat gtctacaccg gcttgcaggc cgaaaccttc
      541 agcgaagacg atttcgattt tgcccaacag catttgcgaa tgctttccgg cttgtatggc
      601 gtactgcgcc cgctcgattt aatgcagcct tatcgtctgg aaatggggat ccgtcttgag
      661 aatgcccgag ggaaagatct gtatcaattc tggggagata tcatcaccaa caagctgaac
      721 gaggcgctcg cagcacaagg cgataatgtg gtgattaatc tggcgtcaga tgagtatttt
      781 aaatcggtga agccgaagaa attgaatgcc gagattatca agccggtgtt cctcgatgag
      841 aagaacggca aatttaagat catcagcttc tacgctaaga aagcacgcgg tctgatgagt
      901 cgtttcatta ttgaaaatcg gctgaccaaa ccagagcaac tgactggttt taatagcgaa
      961 ggttacttct ttgatgaagc ttcctccagc aatggcgaac tggtgtttaa acgctacgag
     1021 cagcgttaag tttgcagtca atgccggatg cggcgtgaac gccttatccg gcctacaaaa
     1081 gcatgcagat tcaatatatt gcagaattca cgtaggcctg ataagacgcg ccagcgtcgc
     1141 atcaggcgct gaatgccgga ttgttacccg gcatttgtca tttagcggtg atgtttgcct
     1201 ggaccatgac cgccgtgatg atcatgagga gctttcttat ggtggcgcgg cggtggcggc
     1261 ggtccgtgtg ggtgccagcg attgcctcgc cattcataat gttgtttcca ccagccgtgg
     1321 tcgcgccagt gacctccatc ccagtaatag ccacgattat cacgattgcc tatctgtaat
     1381 tttactgacg ggactaacgt aatttccgca gcctgtgctg ccatgggagc gaccagaacc
     1441 agggaaagtg cgagtacgat agattgcatc tttttcacag gttactcctt ttatcattgc
     1501 ccgttatggg tcgatatccg gagattacgc gatgagaacg acggttgtta ttctccgcaa
     1561 tcctaatctc taagttaccg catttattga gaatatctcc tttttccctg tcgtttttct
     1621 ccataatttc ttcataaaaa agccgggctg cataaaagca aacccggcct gattgagata
     1681 atgaatagat tttactgatg attcatcatc aatttacgca acgcagcaaa atcggcgggc
     1741 agattatgtg aaagcaaggg taaatcagca cgttctgcca gctcttttgg cagatccaac
     1801 gtttcaccga gaatcgcttc cacgctctct ttaaatttcg ccggatgcgc ggtgccgagg
     1861 aacaagccat attcgcctgg attcaactgg tcacgcagcg cacgatacgc tacggcagcg
     1921 tgcggctccg aggtgtagcc cagttctttt aactcacgca ttgtctgttg cgtggtttca
     1981 tcatccacgg ctgcataacc cagctctttc agttgccaga ttttgcggcg gaacaactct
     2041 tccacacgcg gccagttgtt cggctgactc acgtccatcg cgttggataa cgtcgcctga
     2101 gtcgctttgg gtgaccactg accgtcgtgc aggaaacgtg gcacggtatc gttcacgttg
     2161 gtcgcagcaa taaaacgttt caccggcaga ccgagtgact tcgccagcag acccgccgtc
     2221 aaatcgccga agtttccgct tggcaccgag acaaccagct ggttgcgcgc ttcctgcggc
     2281 agctgcgcaa ctgcttcaaa gtagtagcaa atctgcgcca gcaaacggct gatgttaatc
     2341 gagttagctg agtttaaccc cagcgccact ttcagctctt catcatcaaa cgcctgcttc
     2401 accagcgcct gacaggcatc gaaatcgccg tcgatggcaa cagtttcgat attgccgccc
     2461 aatgtacaga acagtttttc ttgcagtgga ctgattttgc ctcgtggata gaggataacc
     2521 actttcacat tcggtaaacc gtagaaagca tgagccactg ccgctccggt atcaccggag
     2581 gtcgcggtca gaatggtcac tggcttatcg cccgcaatat gggtcagcat ttgtgccata
     2641 aagcgaccgc cgaaatcttt aaatgccagc gttggcccgt ggaacaattc cagacaaccg
     2701 acatcgcttt caacattggc gaccggagcc gggaaggcaa acgccgcgcg cacgcgctct
     2761 tccaggattt cctgcgggat ttcatcacca ataaacgccg agaggatctt cgcactgcgg
     2821 gtgacaaaat ccagcttcag catctcatca atttcagtca ggctgaattc cggcaggtcg
     2881 tgcggaaaaa acagcccctg atttttgccc aacccctggg ttacggcttg cgcaaagctg
     2941 acctgctcat tgtgatcttt cagattgtag agtttcattt agttttccag tactcgtgcg
     3001 cccgccgtat ccagccggca aatatgaaca aaaccttcct gattttgcag gtagttctta
     3061 cccaaccagt cggcaacgcg ctgggcggta tccggcttgt cacacagagc gaacaaggtc
     3121 gggccggagc cggagatacc gctcgctacc gcgccgattt ccgcaaccgc ctgccgcgcc
     3181 tgccggaagc caggcagtaa ccgttcacgg tagggttcag cgataacatc tttcatcagc
     3241 ttcgcggcaa gctcaggctg acgggaatag caggcgtgaa tgaagccagc cagatgtcgc
     3301 ccgtgcgcaa tgcaatcctg gcggcgatac tgcgccggta aaatagccct ggcttctgcc
     3361 gttgagactt taatccccgg atacgccagc acccacagcc actcatcaaa ccctggcact
     3421 tgctggctga tgatgtcgtt ttcttcgatc atcaactgca taccaccaag aaaacacggt
     3481 gccacgttgt cgtaatgaat gctgccggag attcgtcctt ccagctcgcc catcaaagcc
     3541 agcaaacgag tgtcattaag cggcttgcca cagtgttcat tcatcgccat cagcgccgcg
     3601 accaccgaac aggcgctgga gcctaagccc gaaccgattg gcatattctt ttccagagtc
     3661 atcgccactg gaatttgctt gccaagctcc tggcaaaaac gctcccagca ctgataaacg
     3721 atattttccc gtggttctga cggcagctta tcggcaaagc gtccgaggtt gttgagactg
     3781 aatgtctctg ccgcctcaac cgtgactaca tctccgagca atgcaccatc aacaggtgtc
     3841 accgccgccc cgagcacatc aaacccgacg ctcatattgg cactggaagc cggggcataa
     3901 actttaacca tgtcagactc ctaacttcca tgagagggta cgtagcagat cggcaaagac
     3961 accggcagct gtaacgtcat tgcccgcacc atatccgcgc agcaccaacg gcagcggctg
     4021 ataatagtgg ctataaaagg ccagggcgtt ttcgccattt ttcactttga acagcggatc
     4081 attaccatcc acttcggcaa tcttcacgcg gcaggcacca tcttcatcaa tattgccaac
     4141 atagcgcaaa acttttcctt catcacgggc cttcgccacg cgcgcggcaa agagatcgtc
     4201 gagctgtgac agattcgcca taaaagcggc aacatcaccc tcagcgttaa actctgcggg
     4261 cagcacaggt tcaatttcaa tatccgccag ctccagttca cgtcccgttt cacgagcgag
     4321 aatcaatagc ttacgcgcta catccatacc agaaagatca tctcgcggat ccggttcggt
     4381 ataacccatt tcccgcgcca gagtagtcgc ctcggagaaa ctcatgcctt cgtctaactt
     4441 gccgaagata taagaaagcg aacctgaaag aatgccggag aacttcatca attcatcacc
     4501 agcattgagc agattttgca ggttctcaat aaccggtaat ccagccccaa cgttggtgtc
     4561 atagaggaat ttacgccgcg atttttccgc cgcatgacgc aacagatggt agtaatccat
     4621 cgacgaggtg ttggcctttt tgttcggcgt gacaacgtgg aaaccttcgc gcaagaagtc
     4681 ggcatattga tccgccactg cctggctgga ggtgcagtca acaatgaccg ggttcagcag
     4741 atgatattct ttcacgaggc gaattaagcg cccgagatta aacggctctt tggcttgcgc
     4801 cagttcttcc tgccagtttt ccagatttag gccatgcaca ttggtgagca gtgccttcga
     4861 gttggcaaca ccgcagacac gtaagtcgat atgtttattc ttcagccagc tttgttgacg
     4921 cttcagttgc tccagcagcg caccgccaac gccaccgacg ccaatcacaa acacttcgat
     4981 aacctgatcg gtattgaaca gcatctgatg agtaacgcgc acgccagtgg tcgcatcatc
     5041 gttatttacc acgacagaga ttgagcgttc agaagatccc tgagcaatgg cgacaatgtt
     5101 gatattggcg cgggccagcg cggcaaagaa tttcgccgag atcccacgca aggtgcgcat
     5161 accatcacct accaccgaga taatggccag ccgttccgtc accgccagcg gctccagtaa
     5221 gccttctttc agttccaggt agaactcttc ctgcattgcc cgttcagctc gcacacagtc
     5281 gctttgtgga acgcagaaac tgatactgta ttcggaagat gattgcgtaa tcagcaccac
     5341 ggaaatacgg gcgcgtgaca ttgcagcaaa gacgcgcgcc gccatgccga ccattccttt
     5401 catccccgga ccagaaacgc tgaacattgc catattattc agattggaaa tgcctttgac
     5461 cggtaattcg tcttcatcac ggctggcacc aatgagcgta cctggtgctt gaggatttcc
     5521 ggtattttta atcaggcaag ggatctggaa ctgggcgatg ggggtaatgg tgcgggggtg
     5581 aagaacttta gcgccgaagt aggaaagctc catcgcttcc tggtaggaca tcgacttcaa
     5641 caacctcgca tcgggcacct gacgcgggtc gcaggtatag accccgtcaa cgtccgtcca
     5701 aatctcgcaa caatcggcgc gtaaacaggc agccagcacc gccgcggagt agtcggaacc
     5761 gttacgtcca agtaccacca gttcgccttt ttcattaccg gaggtgaaac ctgccatcaa
     5821 caccatgtga tcagccggaa tgcggcttgc cgcaatacgg cgggtggact cagcaatatc
     5881 gacggtagat tcgaggtaat gccccactgc cagcagtttt tcgaccggat cgataacggt
     5941 aacgttgtga ccacgagctt ctaacacgcc ggccataatg gcgatcgaca ttttctcgcc
     6001 acggcaaatc agcgcagcgt tgatgctatc cgggcactgc cccaacaaac taatgccatg
     6061 caggacatgt tttatttggg caaattcctg atcgacgaaa gttttcaatt gcgccagcgg
     6121 gaaccccggc tgggcggcgg cgagtcccgt caaaagttcg gcaaaaatac gttcggcatc
     6181 gctgatattg ggtaaagcat cctggccgct aatggttttt tcaatcatcg ccaccaggtg
     6241 gttggtgatt ttggcggggg cagagaggac ggtggccacc tgcccctgcc tggcattgct
     6301 ttccagaata tcggcaacac gcagaaaacg ttctgcattt gccactgatg taccgccgaa
     6361 cttcaacact cgcatggttg ttacctcgtt acctttggtc gaaaaaaagc ccgcactgtc
     6421 aggtgcgggc ttttttctgt gtttcctgta cgcgtcagcc cgcaccgtta cctgtggtaa
     6481 tggtgatggt ggtggtaatg gtggtgctaa tgcgtttcat ggatgttgtg tactctgtaa
     6541 tttttatctg tctgtgcgct atgcctatat tggttaaagt atttagtgac ctaagtcaat
     6601 aaaattttaa tttactcacg gcaggtaacc agttcagaaa ctgctatcag acactctttt
     6661 tttaatccac acagagacat attgcccgtt gcagtcagaa tgaaaagctg aaaaatactt
     6721 actaaggcgt tttttatttg gtgatatttt tttcaatatc atgcagcaaa cggtgcaaca
     6781 ttgccgtgtc tcgttgctct aaaagcccca ggcgttgttg taaccagtcg accagtttta
     6841 tgtcatctgc cactgccaga gtcgtcagca atgccatgac tcgttcgcgt aaagcttgca
     6901 gttgatgttg gtctgccgtt gtgtcacttt tcgtcggttg ttgtattaat gttgctaatt
     6961 gatagcaata gaccatcacc gcctgcccca gattgagcga aggataatcc gccaccatcg
     7021 gcacaccagt aagaacgtca gccaacgcta actcttcgtt agtcagcccg gaatcttcgc
     7081 gaccaaacac cagcgcggca tggctcatcc atgaagattt ttcctctaac agcagcacca
     7141 gttctactgg cgtggcgtag taatgatatt tcgcccgact gcgcgcagtg gtggcgacag
     7201 tgaaatcgac atcgtgtaac gattcaacca gtgtcgggaa aactttaata ttatcaataa
     7261 tatcaccaga tccatgtgcg acccagcgag tggctggctc cagatgtgcc tgactatcga
     7321 caatccgcag ttcgctaaaa cccatcgttt tcattgcccg cgccgctgcc ccaatatttt
     7381 ctgctctggc gggtgcgacc agaataatcg ttatacgcat attgccactc ttcttgacca
     7441 aatgaccgcg aacagggtga tcactgtcaa cttattacac ggtgcgaatt tacaaatcct
     7501 taacgtaagt cgcagaaaaa gccctttact tatcttaagt aaggctaaac tatttcctga
     7561 ctgtactaac ggttgaattg ttaaaaaatg ctacatatcc ttctgtttac ttaggataat
     7621 tttataaaaa ataaatctcg acaattggat tcaccacgtt tattagttgt atgatgcaac
     7681 tagttggatt attaaaataa tgtgacgaaa gctagcattt agatacgatg atttcatcaa
     7741 actgttaacg tgctacaatt gaacttgata tatgtcaacg aagcgtagtt ttattgggtg
     7801 tccggcccct cttagcctgt tatgttgctg ttaaaatggt taggatgaca gccgtttttg
     7861 acactgtcgg gtcctgaggg aaagtaccca cgaccaagct aatgatgttg ttgacgttga
     7921 tggaaagtgc atcaagaacg caattacgta ctttagtcat gttacgccga tcatgttaat
     7981 ttgcagcatg catcaggcag gtcagggact tttgtacttc ctgtttcgat ttagttggca
     8041 atttaggtag caaacatgca gaccccgcac attcttatcg ttgaagacga gttggtaaca
     8101 cgcaacacgt tgaaaagtat tttcgaagcg gaaggctatg atgttttcga agcgacagat
     8161 ggcgcggaaa tgcatcagat cctctctgaa tatgacatca acctggtgat catggatatc
     8221 aatctgccgg gtaagaacgg tcttctgtta gcgcgtgaac tgcgcgagca ggcgaatgtt
     8281 gcgttgatgt tcctgactgg ccgtgacaac gaagtcgata aaattctcgg cctcgaaatc
     8341 ggtgcagatg actacatcac caaaccgttc aacccgcgtg aactgacgat tcgtgcacgc
     8401 aacctgctgt cccgtaccat gaatctgggt actgtcagcg aagaacgtcg tagcgttgaa
     8461 agctacaagt tcaatggttg ggaactggac atcaacagcc gttcgttgat cggccctgat
     8521 ggcgagcagt acaagctgcc gcgcagcgag ttccgcgcca tgcttcactt ctgtgaaaac
     8581 ccaggcaaaa ttcagtctcg tgctgaactg ctgaagaaaa tgaccggccg tgagctgaaa
     8641 ccacacgacc gtactgtaga cgtgacgatc cgccgtattc gtaaacattt cgaatctacg
     8701 ccggatacgc cggaaatcat cgccaccatc cacggtgaag gttatcgctt ctgtggtgat
     8761 ctggaagatt aatcggcttt accaccgtca aaaaaaacgg cgctttttag cgccgttttt
     8821 atttttcaac cttatttcca gatacgtaat tgatcgtcca ttgtaacttc tttactggct
     8881 ttcattttcg gcagtgaaaa cgcataccag tcgatattac gagtcacaaa catcatgccg
     8941 gccagcgcca ccaccagcac actggttccc aacaacagcg cgctatcggc agagttgagc
     9001 agtccccaca tcacaccatc cagcaacaac agcgcgaggg taaacaacat gctgttgcgc
     9061 cagcctttca ataccgcctg caaataaata ccgttcatta acgccccaat cagactggcg
     9121 attatccatg ccacggtaaa accgatatgt tcagaaagcg ccagcaagag caaataaaac
     9181 atcaccaatg aaagccccac cagcaaatat tgcattgggt gtaaacgttg cgcggtgagc
     9241 gtttcaaaaa caaagaacgc cataaaagtc agtgcaatca gcagaatggc gtacttagtc
     9301 gcccagtccg ttaattggta ttgatcggct ggcgtcgtca ctgcgacgct aaacgcgggg
     9361 aagttttccc agccggtatc attgcctgaa gcaaaacgct caccgagatt attagcaaac
     9421 cagctgcttt gccattgcgc ctgaaaacct gactcgctaa cttcccgttt ggctggtaga
     9481 aaatcaccta aaaaactggg atgcggccag ttgctggtta agggcatttc gctattacgc
     9541 ccggcaggca ccacagaaag atcgccggta ccgcttaaat tcagtgccat attcagctgc
     9601 aggttctgct tccgccagtc cccttcgggt aaagggatat gcacgccctg cccgccttgc
     9661 tctaacccgg taccgggttc aatggtcagt gccgttccgt taacttcagg cgctttcacc
     9721 acaccaatac cacgcgcatc cccgacgcta atcacaataa agggcttgcc taagatgata
     9781 tttggcgcgt tgagctcgct aagacgcgaa acatcgaaat cggcttttag cgttaaatca
     9841 ctgtgccaga cctgaccggt ataaatccct atcttgcgtt cttccacgtt ctgattgcca
     9901 tcaaccatca atgactcagg taaccaaaaa tggataaaac ttcgtttccg ctccacggtt
     9961 ttatcctctt cctgcaccgt ataaagctcg gtcacaggaa tagcgataag cggcccaacg
    10021 agtttttgcg gcccgctggt actttggcga atcgcatctt ccacatcgct acggtaatcg
    10081 gcacgttcga caatcacttg ccgaatcagc attatcggaa tcaacaacag caatactgca
    10141 ccaaacaagg tggtcatttt ccagaacagg ggggatttca acatagtctt ctcctttgca
    10201 atggcagcag gatacgaagg ctatgtggga agaatttgaa gctatgtgaa gtgacggtga
    10261 agtcgaagcg aggccagcac gccaccttcc tgcacgttgc gcagcgtgac ttcgccgtta
    10321 aacaaacggg cgacctcact gacgaacgcc aaccccagac cgctgctttt ttgcccattt
    10381 gcacgcggca aagagtaaaa gcgttcaaaa atacgtgaca gcgcgtagtc aggaatacca
    10441 ctaccggtat ccagcacctt aagggcgacg tgttcctgat ccacttcggc gcttagcgtt
    10501 atgcgaccgc tctcgggggt aaaatcgatg gcgttatcca gtaaattccc cagcgcctgc
    10561 tccagtaacg ccggttcagc agcaacatta acctcagtgg gcataacatg tagagtgatg
    10621 tttttttctg ccaactgcac ggtgcgcgct tcgctgacgc ggcgaaataa tgccgccaca
    10681 tcaacaacag tcagaacgac ttcctgacga ttctccagtc ttgcctggcg tagtaacgtt
    10741 tctaccaatg cctgcatacg cgcattttgc gtcagaatgt tgtcggtaaa acgagccacc
    10801 acttccggtg gcggaccttc gcgtaaaatt tccgccgcgc cacgaatcgc cgccagtggg
    10861 ctttttagct catgggttaa cgcataaaca tactgctcaa tatagttttt cccttccagc
    10921 ttcacgcgca tactttccag cgcctgcgca agcttacgca actcgctact gccgagttca
    10981 ggaagaggaa cgggcttatt gtcagtgacg gaatcggcat agcgagtgag ccgggcaatg
    11041 gagcggttga tccaccaaac catgcctgcg ccaatcacca gtgcaatccc cagcaaaatg
    11101 gcgctggccc ataaaattcg ccgctcgcta cgcttaatga ccggagccat cgccgcgttc
    11161 ggtttgccta cgctcaaaac gccaataagc cgcgagccgt ccataatcgg cgcggcaaca
    11221 tacatcaccg aactttcggg atcggcagga ttttgcaacg tgctgcgcgc accatactga
    11281 ccacgcaacg ttagccagac gtcattccag cgcgaataat cctgcccaac ggctttattt
    11341 gccgaatcga acaatacttt accctgcgaa tcggtcatat agacatgata ttcattgcgc
    11401 actttgttaa tgccaccgat attggcgcga aacggacgat gttgtagctg attaaacgcc
    11461 tgcgccagtt gcccatgcgt tgggtcccca gagagcaaat cgggacgcgc cagctccgcc
    11521 agcaacgttg cggtgtcgat caacgtcccc tccgttgctc ttcgcacgcc cggtttaact
    11581 tctttgacaa aaatagccag tacgaaccag gccgccaccg ccaccagtaa aaaatagccc
    11641 agcagcaacc gcatgccgat acgcattaca ggcccctcag gctatatccc atgccgcgat
    11701 gagtattaat cggtgaaaga tcggggttga tggcacgcag cttggcatgc aacgttttaa
    11761 tgtgggtatc aacggtgcga tcgtaggtgt cctgcgcatc ttcccacacg ctatccatca
    11821 gttgctggcg ggaccagacg cggcctggcg acttgagtaa cgtcttcagc aataaaaact
    11881 cataccgcgt cagcgttaat ggcgtgtcaa accagctgat ctgcgccgcg ggttcattca
    11941 attcaaaatg accaatacgg atgacgggag acggcgacga gaacttcttc acccgacgca
    12001 gtaaggtgcg caccctggcg cacacttcgc ggggtgaaaa cggtttagcc acatagtcgt
    12061 cagcgccaat ttccagccca agcaggcgat cgacctcttc acttcgggcc gtcaggaaca
    12121 gtacaggtaa cgccggatgg agcgccagta actggctgca caattcaaag ccgctgatat
    12181 caggcaaacc aacgtcgaga atcatgacgt cgggaaccag ctggcgagct ttatccagca
    12241 ccggcaagcc tcgctcaaag acctcgacgg caaaaccttc ctgctgcaac atgtagacca
    12301 gcgtgtcggc tatcccttgc tcatcttcca ctaaccagac cgtttcccgt tgtataaatc
    12361 gcctctgtta ttgccgccac ggcatgacag gaaccgcgct aatcgcgttt ttcggcgaac
    12421 cttctacaac tttgtcggag taagccagat aagcgagcgc gttgcgtttg gcgtcataaa
    12481 agcgcacgac ctgtaacgac ttaaagacca gggacgtgcg ttttttgaat actacctcgc
    12541 cctgagcttt gccgttttta atacgatccg acagttcaat cggcccgact tgctgacaag
    12601 aaatagccgc atcggaggta tcttccgcca gacccaatcc ccctttaata ccacctgttt
    12661 tcgcccggct cacataacag gtgacatttt tcacatcggg atcgtcaaag gcttccacaa
    12721 caattttgtg atccgggccg atcattttaa atacggtgtc gaccgaacca atctcttctg
    12781 catgagccaa tggccccagc attatcaggc ttaaagacag gatcaaatgc ttgtatttca
    12841 tattgttacc atttttatct attacacgag caattagttc gtcacggtaa ataacatatt
    12901 gattaagaac aaaatctcaa ttcttttatt tccgtcaagc cctaaaacat actctactaa
    12961 gaaaaaaaca ctgaatgcta aaacagcaaa aaatgctatt atccaattac ctgatgtcag
    13021 gtgctcgttg ttgaaaggat gaggatattt tatggatcag gccggcatta ttcgcgacct
    13081 tttaatctgg ctggaaggtc atctggatca gcccctgtcg ctcgacaatg tagcggcgaa
    13141 agcaggttat tccaagtggc acttacagag aatgtttaaa gatgtcactg gccatgctat
    13201 tggcgcgtat attcgtgctc gtcgtttgtc gaaatcggcg gtcgcactac gcctgactgc
    13261 gcgtccgatt ctggacatcg cgctgcaata ccgcttcgac tctcaacaga catttacccg
    13321 cgcattcaag aagcagtttg cccagactcc tgcactttac cgccgttctc ctgaatggag
    13381 cgcctttggt attcgcccgc cgctacgtct gggtgaattc acaatgccag agcacaaatt
    13441 tgtcaccctg gaagatacgc cgctgattgg tgttacccag agctactcct gttcgctgga
    13501 gcaaatctct gatttccgcc atgaaatgcg ttatcagttc tggcacgatt ttctcggcaa
    13561 cgcgccgacc attccgccag tgctctacgg cctgaatgaa acgcgtccga gtcaggataa
    13621 agacgacgaa caagaggtat tctataccac cgcgttagcc caggatcagg cagatggcta
    13681 tgtactgacg gggcatccgg tgatgctgca gggcggcgaa tatgtgatgt ttacctatga
    13741 aggtctggga accggcgtgc aggagtttat cctgacggta tacggaacgt gcatgccaat
    13801 gctcaacctg acgcgccgta aaggtcagga tattgagcga tactacccgg cagaagacgc
    13861 caaagcggga gatcgcccaa ttaatctgcg ctgtgaactg ctgattccta tccgccgtta
    13921 acgctgcagc tcatctaatg caggggcgtc cagatgcgag atgtcccctg cggtttcaac
    13981 gacccagcca gacgccagcc acaggctttc ctgataatcc acgcgcgaaa tagaacagtt
    14041 acgcagacgt aagcggcgcg ctgcccatgc tggtaatccg agaatcgtac tcaccagaca
    14101 tcccagtgca ataccatggc tcaccagcag cggtcggctt ccctgcggta agtcccggca
    14161 agattccagt gccgcattga cgcgatcgct gagctcctgc attgactcgc cttcaggaat
    14221 acgcccgtca acggtgccat tgaccagctg ccgacgccag ttctcttctt cttcggtcag
    14281 agaatcgata tgtctttttt ccagcacacc catgtttaat tcacgcaggc gagaatcaaa
    14341 gatgatgtca cagccgcagg cctgggcgat gatttccgcc gtacgccggg tgcgtcctaa
    14401 atcgctactg ataatatgcg taatgccaag ctctttggca cgggttgcca cctgcatcgc
    14461 ctgttgctca cctttggcgg tcagcgggct gtcagactgg ccctgaatac gtcgctcggc
    14521 gttccactgc gtttcaccgt ggcggactag gtatacctgt aacatgcttt ttttccgtat
    14581 actgctgtaa cgttaatttt ctgagtaatg ctgattatgc accaagttgt ctgtgcgacc
    14641 accaatcccg ctaaaattca ggccattctg caggcatttc acgagatctt cggcgaagga
    14701 tcctgccata ttgcatccgt tgccgtcgag agcggtgtac cggaacagcc ctttggcagt
    14761 gaggaaacgc gcgctggcgc acgaaatcgg gtagcaaatg cccgccgttt acttccagag
    14821 gctgattttt gggtggcgat tgaagctggc atcgatggtg acagcacttt cagttgggtg
    14881 gtgattgaaa acaccagcca gcgcggcgag gcgcgttcgg ctactttgcc gttacctgcg
    14941 gtgattctgc agaaagtgcg tgaaggtgag gcgcttggtc ccgtgatgtc gcgttatacc
    15001 ggtattgatg agattggtcg taaggaaggg gcgatcggcg tgtttaccgc cgggaaactc
    15061 actcgcgcca gcgtctatca ccaggcggtg atcctggcgc tgagtccgtt tcacaatgcc
    15121 gtgtatcagg cattgtagga cggataaggc gttcacgccg catccggcat tcggtgcacg
    15181 atgcctgatg cgacgctgcc gcgtcttatc aggcctacaa aatcaatcgc ttttcagcaa
    15241 cacctcttcc agccactggc gcagctccac gggcgcggct ttcaggctgt tagatccacg
    15301 cgtaatcgtc gcgatgcccg cgccgagttc attttttaac tcacgctgac tcatttcgcc
    15361 acgcaacagc tcttcgacaa tacgcacgcg agtccccaac gcttcgcgct catctggcgt
    15421 cagcatcagg tttaacaacg gtaaatggag atcgttttgg taggcattct taagcaggtc
    15481 gacaaaacgt aaccactcct ggtgacgctg ttctgccatc gctgctgaat agggtgattg
    15541 ttgggccata atatgtcgcc attgttagcg ggggaagcaa aatgcctccc ccggttgtac
    15601 tcgctaaaga gtacgatagc atatcataaa cgtgcggatc agtaacgacg tccccattcc
    15661 gtggcgctca tcaacgtcgg tttatccccc atgaaataac ggtagtaagc gtcataagcc
    15721 agcacgttct tcacataacc gcgcgtctcg gagaacggaa tactctcgac aaatgccaca
    15781 gcgtcgatac gcccggcgct gttgccaagc caggttcgca cccgtccagg tccggcgtta
    15841 taagctgctg aggagaaaat acggttattg ccaaactgct gataaacata ttgcaggtaa
    15901 ctggtgccaa tgttgatatt cgtttccgga tccagcaatt gcccagggct gctataacca
    15961 ggaatagaga acatcttcac cgtatgggtc gctgtaccag gcataatctg catcaggccg
    16021 ctggccccta ccggtgattt cactttcgga ttccaggcgc tctcctgacg ggcaatcgcc
    16081 atcgcatagc tttgcgggat ctctttccca ctggtgtaac gtttgaaaag atcgttgtaa
    16141 gccagcggga atcgctcttc cagatgatcc caaagcttcc cggcgatcgt tgcctgaacg
    16201 ctaagatccc accattggtt attgaaagca taccgagcca gttgagcctg ctctgttttt
    16261 gacttgctct tcaccagatt ggcccactcg ctacgcgcgg tgttatcgag attccagtac
    16321 atcaactcgc gcacgcgcgc catctccggc ccctgagtca gggcgctgtc aacattctgc
    16381 ggcgctttat caatcttcag ctcatactct tctccgatgc gttgtgctgc aaccatcggg
    16441 tagaaaccac gctgttgcat gagttgatgc aaaatctctt tcgcttcagc ttcacgtccg
    16501 cgttccagca ataaatccgc ctgccagtaa cgccattcat ctttctcttt tgcttccatc
    16561 ggcagacgcg ccagccaggt attcaggccg cgacgatcgc cggtgccaag tgccattcgc
    16621 acacggcgtt caatcaacga cgtggattgc gagcgcataa tggcgtcatc gcgccatttc
    16681 gcctgctcgt cggtgacatc gttgcccatc aaacgccagg cgacgatatc gcgcagctcc
    16741 tgaatctgat cttcattaag ctgctgcgcc tgggcaagcg acgggatcat cagccgtgca
    16801 ttttcagcat cctgccgcgc cacactggca aacgccaccg ctgccatttg acgggtaaaa
    16861 tcggtcgctc cggttgtacg cgcgaaggtc agtaccgtat tagggttgtt cgccagtgaa
    16921 atgattgccg aggcgatagt ctggtaatcg gcaggcatct gccctgccag cactgttacc
    16981 aggccagtgt tacccgcttt catcgccaga cggatacgct ctaaatacgc cagcggatct
    17041 tgtttacctg acgcacgcca gacgctaaat aacttgtcac aggcgttagg ctggctcttg
    17101 ccggttagcc acagctcttt cgccccttgc caggcttctt cactctgccc ggtgttccat
    17161 ttcgcatagt agtaattaca ttgcgcttcg gtagttccgg gcttttccgg gctaaaggct
    17221 aacaagccac gccagtcttc acgccgcgcc agttcattga cgaaacgaga ttgcagcgtg
    17281 cgagcgggag gaagcgtggg gttagcgcga acaaagttag tgaccgtcac cgccggttga
    17341 ttcatcagat catcggtgat ctggcggtat tccaggtagg gataaagcgg ataatccttc
    17401 agtccaggca tcatttgttc gaccacatcc atttgtcgat tatcccaggc ctgcttgatt
    17461 tgcgcgtaac ggctacgctg ctcatccagt gagtcggctc gcgccacgct gctgaccgtc
    17521 agcagacaga caccggcagc caacagccgc caggtaactt gtttggcttt ttccacaagc
    17581 gcatcctcta agtgtaaata catcaatgca gcgtcatgcc gcgtaataga tttatgctaa
    17641 ccagtcattg ccgtttacgc cacgttacgg acactttttt acttttactg cgaaggtgat
    17701 cgaccaactg ggattaggcg gggaaaaagg ctacacttcg cctttgaaaa ctcatcatca
    17761 cgataaacat agaggcgaag tccaacgtgg ctcaattcgt ttataccatg catcgtgtcg
    17821 gcaaagttgt tccgccgaaa cgtcatattt tgaaaaacat ctctctgagt ttcttccctg
    17881 gggcaaaaat tggtgtcctg ggtctgaacg gcgcgggtaa gtctaccctg ctgcgcatta
    17941 tggcaggcat tgataaagac atcgaaggtg aagcgcgtcc gcagccagac atcaagattg
    18001 gttacctgcc gcaggaaccg cagctgaacc cggaacacac cgtgcgtgag tccattgaag
    18061 aagcggtttc tgaagtggtt aacgccctga aacgcctgga tgaagtgtat gcgctgtacg
    18121 ccgatccgga tgccgatttt gacaagctgg ccgctgaaca aggccgtctg gaagagatca
    18181 ttcaggctca cgacggtcat aacctgaacg tacagctgga gcgtgcggcg gatgcgctac
    18241 gtctgccgga ctgggacgcg aaaatcgcta acctctccgg tggtgagcgt cgtcgcgtag
    18301 cgttgtgccg cctgctgctg gaaaaaccag acatgctgct gctcgacgaa ccgaccaacc
    18361 acctggatgc cgaatccgtg gcctggctgg aacgcttcct gcacgacttc gagggcaccg
    18421 tggtggcgat tacccacgac cgttacttcc tcgataacgt tgcaggctgg atcctcgaac
    18481 ttgaccgcgg tgaaggtatt ccgtgggaag gcaactactc ctcctggcta gagcagaaag
    18541 atcagcgcct ggcgcaggaa gcttcacaag aagcggcgcg tcgtaagtcg atcgagaaag
    18601 agctggagtg ggtacgtcag ggaactaaag gccgccagtc gaaaggtaaa gcacgtctgg
    18661 cacgctttga agagctgaac agcaccgaat atcagaaacg taacgaaacc aacgaactgt
    18721 ttattccacc tggaccgcgt ctgggcgata aagtgctgga agtcagcaac ctgcgtaaat
    18781 cctacggtga tcgactgctg attgatgacc tgagcttctc gatcccgaaa ggggcaatcg
    18841 tcgggatcat cggtccgaac ggcgcgggta aatcgaccct gttccgtatg atctctggtc
    18901 aggaacagcc ggacagcggc accatcactt taggtgaaac ggtgaaactg gcatcggttg
    18961 atcagttccg tgactcaatg gataacagca aaaccgtttg ggaagaagtt tccggcgggc
    19021 tggatattat gaagatcggc aacaccgaga tgccaagccg cgcctacgtt ggccgcttta
    19081 actttaaagg ggttgatcag ggtaaacgcg ttggtgaact ttccggtggt gagcgcggtc
    19141 gtctgcatct ggcgaagctg ctgcaggttg gcggcaacat gctgctgctc gacgaaccaa
    19201 ccaacgacct ggatatcgaa accctgcgcg cgctggaaaa cgccctgctg gagttcccgg
    19261 gctgtgcgat ggttatctcg cacgaccgtt ggttcctcga ccgtatcgcc acgcacatcc
    19321 tggactacca ggatgaaggt aaagttgagt tcttcgaagg taactttact gagtacgaag
    19381 agtacaagaa acgcacgctg ggcgcagacg cactggagcc gaagcgtatc aagtacaagc
    19441 gtattgcgaa gtaatgcgta aaatgccgga tgcggcgtga acgccttatc cggcctacaa
    19501 accaagaaat ttcaatacgt tgtgaatctc caggcctgat aagacgcggt aagcgtcgca
    19561 tcaggcattg agcaccgaat gccggatacg gcgtgaacgc cttttccggc ctacaatagc
    19621 cttagtatcc gcaatttcgt agcgggtcac ccgtgctgat tcttttaaac cttgtttaat
    19681 ctcgacagcc tcttccagag aggttttcaa ctcatcaaaa aacttatttt atacctcgcc
    19741 tttgagccgt ttcatcgcgg ttatctctgc tcccccatca tctcccgcac cagctccacg
    19801 cagcgcagga aacggctgtc ataatcgtcc tcttcaaccc gcacgaattc gatattgttc
    19861 tcttccagca tctccaccag caagttctgg aactctttgc gatccaccga actgccgagg
    19921 ctgcgtaaac catccgccac ccacggcgtg ttgttctcca gcaggatcac cagatcgaaa
    19981 cggtattcat caatcaacgc ctgtacgaac ggatgctcac gcccttcgta ctttttgcag
    20041 aacgcctggg tagtgacaaa atcagtgtca ataaacgcca ctttattggc atatttcact
    20101 gcaaaatcaa tgtattgtgc gtggcccagc gcgattttat cgtaatcgga atactgcaat
    20161 gcgatctcat caccgccgag gtgtgaaaag acataatcgc gaccatattc ccacgcactg
    20221 gtggtattga agatattggc aagtttgttt accagggtgg atttaccgct cgactcgcca
    20281 ccaaggatcg ccacggtacg tacaaagaac ggcttcactt ccgtaggaat atattcccag
    20341 tagcggaacg ggttttcgcg gatctgcgca ccgctgatac tcataaaggt acgtttcgga
    20401 tcgaccagca ccgtatcgat ccccagatgt tccatatact gtggcgcatc ggcttcttcc
    20461 gaggtgtaga tcaggtccgg ctgaatcccc ttttcagcca taaacttttt gatgccgttg
    20521 ctccacacat cccagccgtg cggatacggc tccatgccct cctcgttgaa agcatgaatg
    20581 cgaatatttt tctgatattt aaaagtttgt aataaccagc gcagacgatc cggcaccgtg
    20641 ggctgctgcg acatggcgct gtcttcaaac aacgcgcggt cgcgggtatc gtcaaaaccc
    20701 ataatgatat gcagctcgtc aacctggcta caggcgcgct ggataaggta gatatgtccg
    20761 gtatgcagcg ggtagaactt accgaatacg acaccaatgg ttttcttctg tcggggaaat
    20821 tcaagcccca aaaaacggtg caacgcctcc agcttttgcg cgctggggct tttaattttg
    20881 gcattcagta actggcttaa ataccctttg gtcataccgc tggcatcagc tacctgctgt
    20941 agcgtgcagc cctgttgctt gatggcagtt ttcaggtaat caaatgacga catatctccc
    21001 tccgtatctc tcattataag tcgtcgaaca cgctaagcgc gtcggagagt tttttaacgc
    21061 caaaaatctg catcccttcc ggcgcttttt tcggtacgtt agccgccgga acaatcgccc
    21121 ggcgaaaacc gtgtttcgcc gcttctgaaa ttcgttcctg accgctgggc accgggcgga
    21181 tctcccctgc cagcccgact tcaccaaaca ccaccagatc ctgtggcagc ggtctgtcac
    21241 gcaggctgga aaccatcgcc agcagtaacg ctaaatcggc actggtttcg gttaccttca
    21301 cgccgccgac cacgttcaca aatacatcct gatcggccat ttgcagacca ccgtgacggt
    21361 gcaagacagc cagcaggatt gccagacggt tttgttccag ccccactgcc acgcggcgcg
    21421 gattcgccat catcgagtga tcgaccagcg cctgaatctc caccagcaac ggacgcgttc
    21481 cttcccacac caccatcacg gagctgccgg aggtcacttc atctccgcga cttaagaaaa
    21541 ttgccgaagg gttgctgact tcacgcagcc cctgttcggt catcgcgaag acgcccagct
    21601 cattcaccgc gccgaagcgg tttttatggc tgcgcaaggt gcgaaaacgg gagtcggcat
    21661 caccatccag aagcaccgaa cagtcgatac agtgttccag cactttaggg ccagccagcg
    21721 agccatcttt ggttacgtgc ccaaccatga caatcgccac accgcgcgtt ttggcgaagc
    21781 gcgtcagata agccgccgtt tcacgcacct gcgccacgct accaggcgat gattgtacat
    21841 ccgccatatg catcacctgg atcgagtcaa ttaccatcag tttcggttgc tcttcttcgg
    21901 caatcaggca gatctgttcg atgctggttt ccgacaacat attgagattg tcagtcggca
    21961 ggccaaggcg atgagcgcgc attgccacct gttgcagcga ctcttcgcca gtgacataca
    22021 gcgttttcat ctgctgggcc agtttgcaca gcgtttgcag tagcagcgtg gatttccccg
    22081 cacctgggtt accgccaatc agaatggcgc ttcccggcac cacgccgccg cctagtacgc
    22141 ggtcgaactc tttaaatccg gtggaaaaac gcggcagctc ttcaaggctg atatcggaga
    22201 gtttctggac ttttgccacc ccggcgctac cggcatagcc gctgagacgc tcgttacgcg
    22261 ccaccgttgg cgacgcagca agacgcacct cggtgatggt gttccaggca tgacaggcac
    22321 tgcactgccc ctgccagcgc ggataatcgg ccccgcattc attacaaaca aaggcgcgtt
    22381 ttggagcttt tgccacggtg tacctcgtta atgctgtgcc gcccgcagga tggcgggcga
    22441 gcaattactt ctgattcagg ctgccagaga ggatgcagaa tacccccatc aggtcagcgt
    22501 gacggatggt gacttccgcc tttgcattca cttttggctt ggcatggtag gcaatcccca
    22561 gccctgctgc tttgatcatc ggcaggtcat tagctccatc gccaatcgcc acggtctgcg
    22621 ccagcgggat ttcatactcc tgcgcgaggc gagtcaaagt tttcgctttg tactgcgcgt
    22681 ctacgatgtc gccgatcaca ttgccggtaa atttaccgtc catgatctcc agttcattgg
    22741 ctaccacggc ggtcaggcgc agcttgtcgc gcagatattc agcaaagaaa gtaaagccgc
    22801 cggaggcaat cgccactttc cagcccagcg tttccagctt gagcaccagt tgcgttaagc
    22861 ctggcatcag cggcagattt tcacgcacct gttgcagaat attggcgtca gcgcctttca
    22921 gcgtcgccac acggctgcgc aggctggcgg taaaatcgag ttcgccgcgc atcgcccgtt
    22981 cggttacttc cgccaccatc tcgcccgttc cggccagttt ggcaatttca tcaatacatt
    23041 caatctggat ggcggtggaa tccatgtcca tcaccagcaa acccggcgtg cgcaggtgcg
    23101 ggattttccc cagcggggcg acatccagtt gcgcttcatg ggccaggcgc gtagcccgtg
    23161 cggtgagtga acctgccaga cgaatcacct gataatcttc cacgcaccag gcggcaacaa
    23221 tcaccatcgc cgcacccagt ttgctctggt attgggtcag acgctgttta tccagcccac
    23281 gaccatacag cagccagccg ctacgacctg cgtggtaatc cagtggcatc acttcatcac
    23341 cacttaatga aagaggcaga ccaggccata aagagacatc ttcaggcagg tcgcaccagg
    23401 taatgttagg cattaaggat cctgtaaaat cgttcgaagc agggaaaata acgcatgagg
    23461 ctaccttgta tccattgctt ctggcaacat taagtctcaa attttcaaag ggtggaagat
    23521 ggctcgcaca aaactgaaat tccggctgca tcgggcagtg attgtcctgt tctgtcttgc
    23581 cttgttagtg gcgctgatgc agggagcgtc atggtttagt caaaaccacc agcgacaacg
    23641 taatccacag ctggaagaac tggcccgcac cctggcgcgt caggtaacgc tgaacgttgc
    23701 accgctgatg cgtaccgact caccggatga aaaacgcatt caggcgatcc tcgatcagtt
    23761 aacggatgaa agccgtatcc tcgacgcggg tgtgtatgac gaacaaggcg atcttatcgc
    23821 acgttctggc gaaagcgtcg aagtgcgcga ccggctggcg ctcgacggta aaaaagcggg
    23881 cggctatttt aaccagcaga ttgtcgaacc aattgccggg aaaaacggac cgctcggcta
    23941 tctgcgcctg acgctcgaca cccatacgct cgccaccgaa gcccaacagg tggataacac
    24001 cactaacatt ttacgcctga tgttgctgct ttcactggca atcggcgtag tgctgacccg
    24061 cacgctgcta cagggtaaac gtacccgctg gcagcaatcg cccttcctgt taaccgccag
    24121 caaaccggtg ccggaagagg aagaaagcga gaaaaaagag tgacccatta ctacaagaaa
    24181 ggaaatcgtt atgtccacat tacgcctgct catctctgac tcttacgacc cgtggtttaa
    24241 cctggcggtg gaggagtgta tttttcgcca gatgcccgcc acgcagcgcg ttctgtttct
    24301 ctggcgcaat gccgacacgg tagtgattgg tcgcgcgcag aacccgtgga aagagtgtaa
    24361 tacccggcgg atggaagaag ataacgtccg cctggcacgg cgcagtagcg gtggcggcgc
    24421 ggtgttccac gatctcggca atacctgctt tacctttatg gctggcaagc cggagtacga
    24481 taaaaccatc tccacgtcga ttgtgctcaa tgcgctgaac gcgcttggcg tcagcgccga
    24541 agcgtccggg cgtaacgatc tggtggtgaa aaccgccgaa ggcgaccgca aagtctcagg
    24601 atcggcctat cgcgaaacca aagatcgtgg cttccaccac ggcaccttgc tgctcaatgc
    24661 cgaccttagc cgcctggcaa actatctcaa tccggataaa aagaaactgg cggcgaaagg
    24721 cattacctca gtgcgttccc gcgtgaccaa cctcaccgag ctgctgccgg ggatcaccca
    24781 tgagcaggtt tgcgaggcca taaccaaggc ctttttcgcc cattatggcg agcgtgtaga
    24841 agcggaaatc atctccccgg acaaaacgcc agacttgcca aacttcgccg aaatctttgc
    24901 ccgtcagagt agctgggaat ggaacttcgg tcaggctccg gcattctcgc atctgctgga
    24961 tgaacgcttt agctggggcg gcgtggaact gcatttcgac gttgaaaaag gccatatcac
    25021 ccgcgcccag gtgtttaccg acagcctcaa ccccgcgccg ctggaagccc tcgccgggcg
    25081 actgcaaggc tgcctgtacc gcgcggatat gctgcaacaa gagtgcgaag cgctgttggt
    25141 tgacttcccg gaccaggaaa aagagctacg ggagttgtcg acgtggatag cgggggcggt
    25201 aaggtaactc gctgattaaa ataccaaagg aagggaatat gatcgttctg gaaaaccagg
    25261 agcgggagat tatcaattta atgttaagcc agcgtatttc ctggctagcc gccgtgcgta
    25321 tcaggcataa attatcgctt gctgaagtaa gtaaaatgtt aggtatctcg attaattctc
    25381 taaaatagat cgaaaagacg gaacggttta gctcaaacat caaaagcaaa atggcagaaa
    25441 tttatggttg tccaccagag ttgctgatat gcccttcctg gatgacggct gaacataaat
    25501 gaatagatt
//
LOCUS       DADMJE010000045        25242 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.046, whole genome shotgun sequence.
ACCESSION   DADMJE010000045 DADMJE010000000
VERSION     DADMJE010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.046"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..403)
                     /locus_tag="JN001_001676"
     CDS             complement(<1..403)
                     /locus_tag="JN001_001676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY9052942.1"
                     /translation="MDTTLPFLILYACLSALLFFWDAKHGLLPDRFTCPLLWSGLLFY
                     QVCHPDGLADALWGTIVGYGTFAVIYWGYRILRHKEGLGYGDVKFLAALGAWHSWAFL
                     PRLVFLAASFACGAVVIGLLMRGKESLKNPLP"
     gene            782..1093
                     /gene="rpsJ"
                     /locus_tag="JN001_001677"
     CDS             782..1093
                     /gene="rpsJ"
                     /locus_tag="JN001_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014268624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HAY9052943.1"
                     /translation="MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPT
                     RKERFTVLISPHVNKDARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISL
                     G"
     gene            1126..1755
                     /gene="rplC"
                     /locus_tag="JN001_001678"
     CDS             1126..1755
                     /gene="rplC"
                     /locus_tag="JN001_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000579825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HAY9052944.1"
                     /translation="MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDG
                     YRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGEEFTVGQSISVELFA
                     DVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKK
                     MAGQMGNERVTVQSLDVVRVDAERNLLLVKGAVPGATGSDLIVKPAVKA"
     gene            1766..2371
                     /gene="rplD"
                     /locus_tag="JN001_001679"
     CDS             1766..2371
                     /gene="rplD"
                     /locus_tag="JN001_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010304939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HAY9052945.1"
                     /translation="MELVLKDAQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTR
                     AQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARPQDHSQKVNKKMYR
                     GALKSILSELVRQDRLIVVEKFSVEAPKTKLLAQKLKDMALEDVLIITGELDENLFLA
                     ARNLHKVDVRDATGIDPVSLIAFDKVVMTADAVKQVEEMLA"
     gene            2368..2670
                     /gene="rplW"
                     /locus_tag="JN001_001680"
     CDS             2368..2670
                     /gene="rplW"
                     /locus_tag="JN001_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007891652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HAY9052946.1"
                     /translation="MIREERLLKVLRAPHVSEKASTAMEKSNTIVLKVAKDATKAEIK
                     AAVQKLFEVEVEVVNTLVVKGKVKRHGQRIGRRSDWKKAYVTLKEGQNLDFVGGAE"
     gene            2688..3509
                     /gene="rplB"
                     /locus_tag="JN001_001681"
     CDS             2688..3509
                     /gene="rplB"
                     /locus_tag="JN001_001681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001738551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HAY9052947.1"
                     /translation="MAVVKCKPTSPGRRHVVKVVNPELHKGKPFAPLLEKNSKSGGRN
                     NNGRITTRHIGGGHKQAYRIVDFKRNKDGIPAVVERLEYDPNRSANIALVLYKDGERR
                     YILAPKGLKAGDQIQSGVDAAIKPGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGT
                     YVQIVARDGAYVTLRLRSGEMRKVEADCRATLGEVGNAEHMLRVLGKAGAARWRGVRP
                     TVRGTAMNPVDHPHGGGEGRNFGKHPVTPWGVQTKGKKTRSNKRTDKFIVRRRSK"
     gene            3526..3804
                     /gene="rpsS"
                     /locus_tag="JN001_001682"
     CDS             3526..3804
                     /gene="rpsS"
                     /locus_tag="JN001_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HAY9052948.1"
                     /translation="MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNM
                     IGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTYRGHAADKKAKKK"
     gene            3819..4151
                     /gene="rplV"
                     /locus_tag="JN001_001683"
     CDS             3819..4151
                     /gene="rplV"
                     /locus_tag="JN001_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000447526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HAY9052949.1"
                     /translation="METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAA
                     VLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKRIMPRAKGRADRILKRTSH
                     ITVVVSDR"
     gene            4169..4870
                     /gene="rpsC"
                     /locus_tag="JN001_001684"
     CDS             4169..4870
                     /gene="rpsC"
                     /locus_tag="JN001_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000529946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HAY9052950.1"
                     /translation="MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLT
                     KELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQIN
                     IAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGA
                     EIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPE
                     KPAAQPKKQQRKGRK"
     gene            4883..5293
                     /gene="rplP"
                     /locus_tag="JN001_001685"
     CDS             4883..5293
                     /gene="rplP"
                     /locus_tag="JN001_001685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017805229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HAY9052951.1"
                     /translation="MLQPKRTKFRKMHKGRNRGLAQGTDVSFGSFGLKAVGRGRLTAR
                     QIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVL
                     YEMDGVPEELAREAFKLAAAKLPIKTTFVTKTVM"
     gene            5293..5484
                     /gene="rpmC"
                     /locus_tag="JN001_001686"
     CDS             5293..5484
                     /gene="rpmC"
                     /locus_tag="JN001_001686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000644743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HAY9052952.1"
                     /translation="MKAKELREKSVEELNTELLNLLREQFNLRMQAASGQLQQSHLLK
                     QVRRDVARVKTLLNEKAGA"
     gene            5484..5738
                     /gene="rpsQ"
                     /locus_tag="JN001_001687"
     CDS             5484..5738
                     /gene="rpsQ"
                     /locus_tag="JN001_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006817275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HAY9052953.1"
                     /translation="MTDKIRTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKL
                     HVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVEKAVL"
     gene            5903..6274
                     /gene="rplN"
                     /locus_tag="JN001_001688"
     CDS             5903..6274
                     /gene="rplN"
                     /locus_tag="JN001_001688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013975775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HAY9052954.1"
                     /translation="MIQEQTMLNVADNSGARRVMCIKVLGGSHRRYAGVGDIIKITIK
                     EAIPRGKVKKGDVLKAVVVRTKKGVRRPDGSVIRFDGNACVLLNNNSEQPIGTRIFGP
                     VTRELRSEKFMKIISLAPEVL"
     gene            6285..6599
                     /gene="rplX"
                     /locus_tag="JN001_001689"
     CDS             6285..6599
                     /gene="rplX"
                     /locus_tag="JN001_001689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000729185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HAY9052955.1"
                     /translation="MAAKIRRDDEVIVLTGKDKGKRGKVKNVLSSGKVIVEGINLVKK
                     HQKPVPALNQPGGIVEKEAAIQVSNVAIFNAATGKADRVGFRFEDGKKVRFFKSNSET
                     IK"
     gene            6614..7153
                     /gene="rplE"
                     /locus_tag="JN001_001690"
     CDS             6614..7153
                     /gene="rplE"
                     /locus_tag="JN001_001690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001096198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HAY9052956.1"
                     /translation="MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAI
                     ADKKLLDNAAADLAAISGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFER
                     LITIAVPRIRDFRGLSAKSFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTA
                     KSDEEGRALLAAFDFPFRK"
     gene            7168..7473
                     /gene="rpsN"
                     /locus_tag="JN001_001691"
     CDS             7168..7473
                     /gene="rpsN"
                     /locus_tag="JN001_001691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005599304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HAY9052957.1"
                     /translation="MAKQSMKAREVKRVALADKYFAKRAELKAIISDVNASDEDRWNA
                     VLKLQTLPRDSSPSRQRNRCRQTGRPHGFLRKFGLSRIKVREAAMRGEIPGLKKASW"
     gene            7507..7899
                     /gene="rpsH"
                     /locus_tag="JN001_001692"
     CDS             7507..7899
                     /gene="rpsH"
                     /locus_tag="JN001_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011148781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HAY9052958.1"
                     /translation="MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEG
                     FIEDFKVEGDTKPELELTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIA
                     VVSTSKGVMTDRAARQAGLGGEIICYVA"
     gene            7912..8445
                     /gene="rplF"
                     /locus_tag="JN001_001693"
     CDS             7912..8445
                     /gene="rplF"
                     /locus_tag="JN001_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HAY9052959.1"
                     /translation="MSRVAKAPVVVPAGVDVKINGQVITIKGKNGELTRTLNDAVEVK
                     HADNTLTFGPRDGYADGWAQAGTARALLNSMVIGVTEGFTKKLQLVGVGYRAAVKGNV
                     INLSLGFSHPVDHQLPAGITAECPTQTEIVLKGADKQVIGQVAADLRAYRRPEPYKGK
                     GVRYADEVVRIKEAKKK"
     gene            8455..8808
                     /gene="rplR"
                     /locus_tag="JN001_001694"
     CDS             8455..8808
                     /gene="rplR"
                     /locus_tag="JN001_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HAY9052960.1"
                     /translation="MDKKSARIRRATRARRKLQELGATRLVVHRTPRHIYAQVIAPNG
                     SEVLVAASTVEKAIAEQLKYTGNKDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGR
                     VQALADAAREAGLQF"
     gene            8823..9326
                     /gene="rpsE"
                     /locus_tag="JN001_001695"
     CDS             8823..9326
                     /gene="rpsE"
                     /locus_tag="JN001_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004106339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HAY9052961.1"
                     /translation="MAHIEKQAGELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNG
                     RVGFGYGKAREVPAAIQKAMEKARRNMINVALNNGTLQHPVKGVHTGSRVFMQPASEG
                     TGIIAGGAMRAVLEVAGVHNVLAKAYGSTNPINVVRATIDGLENMNSPEMVAAKRGKS
                     VEEILGK"
     gene            9330..9509
                     /gene="rpmD"
                     /locus_tag="JN001_001696"
     CDS             9330..9509
                     /gene="rpmD"
                     /locus_tag="JN001_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012147215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HAY9052962.1"
                     /translation="MAKTIKITQTRSAIGRLPKHKATLLGLGLRRIGHTVEREDTPAI
                     RGMINAVSFMVKVEE"
     gene            9513..9947
                     /gene="rplO"
                     /locus_tag="JN001_001697"
     CDS             9513..9947
                     /gene="rplO"
                     /locus_tag="JN001_001697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011095501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HAY9052963.1"
                     /translation="MRLNTLSPAEGSKKAGKRLGRGIGSGLGKTGGRGHKGQKSRSGG
                     GVRRGFEGGQMPLYRRLPKFGFTSRKAAITAEVRLSDLAKVEGGVVDLNTLKAANIIG
                     IQIEFAKVILAGEVTTPVTVRGLRVTKGARAAIEAAGGKIEE"
     gene            9955..11286
                     /gene="secY"
                     /locus_tag="JN001_001698"
     CDS             9955..11286
                     /gene="secY"
                     /locus_tag="JN001_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004868351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HAY9052964.1"
                     /translation="MAKQPGLDFQSAKGGLGELKRRLLFVIGALIVFRIGSFIPIPGI
                     DAAVLAKLLEQQRGTIIEMFNMFSGGALSRASIFALGIMPYISASIIIQLLTVVHPTL
                     AEIKKEGESGRRKISQYTRYGTLVLAIFQSIGIATGLPNMPGMQGLVINPGFAFYFTA
                     VVSLVTGTMFLMWLGEQITERGIGNGISIIIFAGIVAGLPPAIAHTIEQARQGDLHFL
                     VLLLVAVLVFAVTFFVVFVERGQRRIVVNYAKRQQGRRVYAAQSTHLPLKVNMAGVIP
                     AIFASSIILFPATIASWFGGGTGWNWLTTISLYLQPGQPLYVLLYASAIIFFCFFYTA
                     LVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTRLTLVGALYITFICLIPEFMR
                     DAMKVPFYFGGTSLLIVVVVIMDFMAQVQTLMMSSQYESALKKANLKGYGR"
     gene            11318..11434
                     /gene="rpmJ"
                     /locus_tag="JN001_001699"
     CDS             11318..11434
                     /gene="rpmJ"
                     /locus_tag="JN001_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020322760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY9052965.1"
                     /translation="MKVRASVKKLCRNCKIVKRDGVIRVICSAEPKHKQRQG"
     gene            11581..11937
                     /gene="rpsM"
                     /locus_tag="JN001_001700"
     CDS             11581..11937
                     /gene="rpsM"
                     /locus_tag="JN001_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018356918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HAY9052966.1"
                     /translation="MARIAGINIPDHKHAVIALTSIYGVGKTRSKAILAAAGIAEDVK
                     ISELSEGQIDTLRDEVAKFVVEGDLRREISMSIKRLMDLGCYRGLRHRRGLPVRGQRT
                     KTNARTRKGPRKPIKK"
     gene            11954..12343
                     /gene="rpsK"
                     /locus_tag="JN001_001701"
     CDS             11954..12343
                     /gene="rpsK"
                     /locus_tag="JN001_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HAY9052967.1"
                     /translation="MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGW
                     ATAGGSGFRGSRKSTPFAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNA
                     AGFRITNITDVTPIPHNGCRPPKKRRV"
     gene            12377..12997
                     /gene="rpsD"
                     /locus_tag="JN001_001702"
     CDS             12377..12997
                     /gene="rpsD"
                     /locus_tag="JN001_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004410410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HAY9052968.1"
                     /translation="MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIEQAPGQHGAR
                     KPRLSDYGVQLREKQKVRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVV
                     YRMGFGATRAEARQLVSHKAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALE
                     LAEQREKPTWLEVDAGKMEGTFKRKPERSDLSADINEHLIVELYSK"
     gene            13023..14012
                     /gene="rpoA"
                     /locus_tag="JN001_001703"
     CDS             13023..14012
                     /gene="rpoA"
                     /locus_tag="JN001_001703"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005970247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HAY9052969.1"
                     /translation="MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALR
                     RILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTL
                     NKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASTRIH
                     SEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIR
                     RAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIH
                     YIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPASIADE"
     gene            14053..14436
                     /gene="rplQ"
                     /locus_tag="JN001_001704"
     CDS             14053..14436
                     /gene="rplQ"
                     /locus_tag="JN001_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HAY9052970.1"
                     /translation="MRHRKSGRQLNRNSSHRQAMFRNMAGSLVRHEIIKTTLPKAKEL
                     RRVVEPLITLAKTDSVANRRLAFARTRDNEIVAKLFNELGPRFASRAGGYTRILKCGF
                     RAGDNAPMAYIELVDRSEKAEAAAE"
     gene            14543..14911
                     /locus_tag="JN001_001705"
     CDS             14543..14911
                     /locus_tag="JN001_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1992 domain-containing protein"
                     /protein_id="HAY9052971.1"
                     /translation="MWLLDQWAERHIAEAQAKGEFDNLAGSGEPLILDDDSHVPPELR
                     AGYRLLKNAGCLPPELEQRREAIQLLDILRGIRHDDPQYQEVSRRLSLLELKLRQAGF
                     STDFLRGDYADKLLDKINDN"
     gene            14922..15347
                     /gene="zntR"
                     /locus_tag="JN001_001706"
     CDS             14922..15347
                     /gene="zntR"
                     /locus_tag="JN001_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn(2+)-responsive transcriptional regulator"
                     /protein_id="HAY9052972.1"
                     /translation="MYRIGELAKMAEVTPDTIRYYEKQQMMEHEVRTEGGFRLYTESD
                     LQRLKFIRHARQLGFSLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAELQS
                     MQRSLQRLNDACCGTAHSSVYCSILEALEQGASGVKSGC"
     gene            15403..15621
                     /gene="arfA"
                     /locus_tag="JN001_001707"
     CDS             15403..15621
                     /gene="arfA"
                     /locus_tag="JN001_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome alternative rescue factor ArfA"
                     /protein_id="HAY9052973.1"
                     /translation="MSRYQHTKGQIRDNAIEALLHDPLFRQRVEKNKKGKGSYMRKGK
                     HGNRGNWEASGKKVNHFFTTGLLLSGAC"
     gene            complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JN001_001708"
     CDS             complement(15618..16028)
                     /gene="mscL"
                     /locus_tag="JN001_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large-conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HAY9052974.1"
                     /translation="MSIIKEFREFAMRGNVVDLAVGVIIGAAFGKIVSSLVADIIMPP
                     LGLLIGGIDFKQFAVTLRDAQGDIPAVVMHYGVFIQNVFDFLIVAFAIFMAIKLINKL
                     NRKKEEPAAAPAPTKEEVLLAEIRDLLKEQNNRS"
     gene            complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JN001_001709"
     CDS             complement(16158..17534)
                     /gene="trkA"
                     /locus_tag="JN001_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004125888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkA"
                     /protein_id="HAY9052975.1"
                     /translation="MKIIILGAGQVGGTLAENLVGENNDITVVDTNGERLRTLQDKFD
                     LRVVQGHGSHPRVLREAGADDADMLVAVTSSDETNMVACQVAYSLFNTPNRIARIRSP
                     DYVRDADKLFHSDAVPIDHLIAPEQLVIDNIYRLIEYPGALQVVNFAEGKVSLAVVKA
                     YYGGPLIGNALSTMREHMPHIDTRVAAIFRHDRPIRPQGSTIVEAGDEVFFIAASQHI
                     RAVMSELQRLEKPYKRIMLVGGGNIGAGLARRLEKDYNVKLIERNQQRAAELAEKLQN
                     TIVFFGDASDQELLAEEHIDQVDLFIAVTNDDEANIMSAMLAKRMGAKKVMVLIQRRA
                     YVDLVQGSVIDIAISPQQATISALLSHVRKADIVGVSSLRRGVAEAIEAVAHGDESTS
                     RVVGRVIDEIKLPPGTIIGAVVRGNDVMIANDNLRIEQGDHVIMFLTDKKFITDVERL
                     FQPSPFFL"
     gene            complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JN001_001710"
     CDS             complement(17556..18845)
                     /gene="rsmB"
                     /locus_tag="JN001_001710"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HAY9052976.1"
                     /translation="MKKQRNLRSMAAQAVEQVVEQGQSLSNILPPLQQKVSDKDKALL
                     QELCFGVLRTLSQLDWLINKLMARPMTGKQRTVHYLIMVGLYQLLYTRIPPHAALAET
                     VEGAIAIKRPQLKGLINGVLRQFQRQQEELLAKFNASDARYLHPSWLLKRLQKAYPEQ
                     WQSIVEANNQRPPMWLRVNRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPVH
                     ALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAV
                     DIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRH
                     PDIKWLRRDRDIPELAQLQSEILDAIWPHLKSGGTLVYATCSVLPEENSLQIKAFLQR
                     TADAELCETGTPEQPGKQNLPGAEEGDGFFYAKLIKK"
     gene            complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JN001_001711"
     CDS             complement(18891..19838)
                     /gene="fmt"
                     /locus_tag="JN001_001711"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HAY9052977.1"
                     /translation="MSESLRIIFAGTPDFAARHLDALLSSGHNVVGVFTQPDRPAGRG
                     KKLMPSPVKVLAEEKGLPVFQPVSLRPQENQQLVADLQADVMVVVAYGLILPKAVLEM
                     PRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDMLYKLSCPIT
                     AEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPEVQDETLVTYAEKLSKEEARIDWS
                     LSAAQLERYIRAFNPWPMSWLEIERQPVKVWKASVIDTATNAAPGTILEANKQGIQVA
                     TGDGILNLLSLQPAGKKAMSAQDLLNSRREWFVPGNRLA"
     gene            complement(19853..20362)
                     /gene="def"
                     /locus_tag="JN001_001712"
     CDS             complement(19853..20362)
                     /gene="def"
                     /locus_tag="JN001_001712"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HAY9052978.1"
                     /translation="MSVLQVLHIPDERLRKVAKPVEEVNAEIQRIVDDMFETMYAEEG
                     IGLAATQVDIHQRIIVIDVSENRDERLVLINPELLEKSGETGIEEGCLSIPEQRALVP
                     RAEKVKIRALDRDGKPFELEADGLLAICIQHEMDHLVGKLFMDYLSPLKQQRIRQKVE
                     KLDRLKARA"
     gene            20492..21616
                     /gene="dprA"
                     /locus_tag="JN001_001713"
     CDS             20492..21616
                     /gene="dprA"
                     /locus_tag="JN001_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HAY9052979.1"
                     /translation="MVDTDIWLRLMSISSLYGDDMVRIAHWLAKQSHIDAVVLQQTGL
                     TLRQAQRFLSFPRKSIESSLCWLEQPNHHLIPADSEFYPPQLLATTDYPGALFVEGEL
                     YALHSFQLAVVGSRAHSWYGERWGRLFCETLATRGVTITSGLARGIDGVAHKAALQVN
                     GVSIAVLGNGLNTIHPRRHARLATSLLEHGGALVSEFPLDVSPLAYNFPRRNRIISGL
                     SKGVLVVEAALRSGSLVTARCALEQGREVFALPGPIGNPGSEGPHWLIKQGAILVTEP
                     EEILENLQFGLHWLPDAPENSFYSPDQQDVALPFPELLANVGDEVTPVDVVAERAGQP
                     VPEVVTQLLELELAGWIAAVPGGYVRLRRACHVRRTNVFV"
     gene            21588..22061
                     /locus_tag="JN001_001714"
     CDS             21588..22061
                     /locus_tag="JN001_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF494 domain-containing protein"
                     /protein_id="HAY9052980.1"
                     /translation="MFDVLMYLFETYIHTEAELRVDQDKLEQDLTDAGFDREDIYNAL
                     LWLEKLADYQEGLTEPMQLASDPLSMRIYTPEECERLDASCRGFLLFLEQIQVLNLEI
                     REMVIERVLALDTAEFDLEDLKWVILMVLFNIPGCENAYQQMEELLFEVNEGMLH"
     gene            22090..22632
                     /locus_tag="JN001_001715"
     CDS             22090..22632
                     /locus_tag="JN001_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9052981.1"
                     /translation="MAKSALFTVRNNESCPKCGAELVIRSGKHGPFLGCSQYPACDYV
                     RPLKSSADGHIVKVLEGQVCPACGANLVLRQGRFGMFIGCSNYPECEHTELIDKPDET
                     AITCPQCRTGHLVQRRSRYGKTFHSCDRYPECQFAINFKPIAGECPECHYPLLIEKKT
                     AQGVKHFCASKQCGKPVSAE"
     gene            22637..23209
                     /gene="tsaC"
                     /locus_tag="JN001_001716"
     CDS             22637..23209
                     /gene="tsaC"
                     /locus_tag="JN001_001716"
                     /EC_number="2.7.7.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonylcarbamoyladenylate synthase type 1
                     TsaC"
                     /protein_id="HAY9052982.1"
                     /translation="MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSETAVM
                     RLLELKQRPVDKGLILIAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPAT
                     TPRWLTGRFDSLAVRVTDHPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGA
                     AFPVVLGETGGRLNPSEIRDALTGELFRQG"
     gene            23214..24032
                     /gene="aroE"
                     /locus_tag="JN001_001717"
     CDS             23214..24032
                     /gene="aroE"
                     /locus_tag="JN001_001717"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HAY9052983.1"
                     /translation="METYAVFGNPIAHSKSPFIHQQFAQQLNIEHPYGRVLAPINDFI
                     NTLNAFFSAGGKGANVTVPFKEEAFARADELTERAALAGAVNTLKRLEDGRLQGDNTD
                     GIGLLSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAK
                     LFAHTGSIQALGMDELEGHEFDLIINATSSGISGDIPAIPSSLIHLGIYCYDMFYQKG
                     KTPFLAWCEQRGSKRNADGLGMLVAQAAHAFLLWHGVLPDVEPVIKQLQEELSA"
     gene            24029..24286
                     /locus_tag="JN001_001718"
     CDS             24029..24286
                     /locus_tag="JN001_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1488 domain-containing protein"
                     /protein_id="HAY9052984.1"
                     /translation="MNQAIQFPDREEWDENKKCVCFPALVNGMQLTCAISGESLAYRF
                     TGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP"
     gene            complement(24262..24816)
                     /locus_tag="JN001_001719"
     CDS             complement(24262..24816)
                     /locus_tag="JN001_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma carbonic anhydrase family protein"
                     /protein_id="HAY9052985.1"
                     /translation="MSDVLRPYRDLFPQIGQRVMIDDSSVVIGGVRLADDVGIWPLVV
                     IRGDVHYVQIGARTNIQDGSMLHVTHKSSYNPDGNPLTIGEDVTVGHKVMLHGCTIGN
                     RVLVGMGSILLDGAIVEDDVMIGAGSLVPQNKRLESGYLYLGSPVKQIRPLSDEEKAG
                     LRYSANNYVKWKDEYLDQGNQTQP"
BASE COUNT         6457 a         5995 c         6570 g         6220 t
ORIGIN      
        1 aaggcagcgg gttttttaat gattcttttc ctctcatgag cagaccaata actacggctc
       61 cgcaagcgaa tgaggcagca aggaaaacca gtcgtggtaa gaaggcccat gaatgccagg
      121 cgccaagggc ggcgagaaac ttcacatcac catagcctaa tccttcttta tgtcgcagta
      181 tgcgataccc ccagtaaatg acagcgaatg tgccgtaacc aacaattgtc ccccataacg
      241 catcggctaa accatcagga tgacaaactt gatagaacaa aagacctgac cagagtaacg
      301 ggcacgtaaa tctgtcaggt aacaagccat gctttgcatc ccagaaaaaa agtagggctg
      361 ataaacaagc gtacaaaatc agaaagggaa gggtagtgtc cataaaacat cctctgtaat
      421 tggagtatca ccatcgaata actccggatg ctcagcaaca gagagagcgc tgatttgtta
      481 acctgattcc ggtgaaaaac gctatcttca caaccttaca aatttcgtgg aatgcagctc
      541 gcaatctgcg cgttgcgatt aatttctacc cgatgcttgc gtcaggctca gatttgcgta
      601 taatgcgcgg gcttgtcgta gttgacagca ggttcaatct gaacctcagt tagccgaatt
      661 tggctaccta acaatgctcc caatcgggga gctacgtaag aacggttaca ctctcccatc
      721 aatcgtaatg ggtctgagga gtaatcattt tcgtttataa aataattgga gctctggtct
      781 catgcagaac caaagaatcc gtatccgcct gaaagcgttt gatcatcgtc tgatcgatca
      841 agcaaccgcg gaaatcgtcg agactgccaa gcgcactggt gcgcaggtcc gtggtccgat
      901 cccgctgccg acacgcaaag agcgcttcac tgttctgatc tccccgcacg tcaacaaaga
      961 cgcgcgcgat cagtacgaaa tccgtactca cttgcgtctg gttgacatcg ttgagccaac
     1021 cgagaaaacc gttgatgctc tgatgcgtct ggatctggct gccggtgtag acgtgcagat
     1081 cagcctgggt taatcaggtc attgagcgat tgagaggttg aaacaatgat tggtttagtc
     1141 ggtaaaaaag tgggtatgac ccgtatcttc acagaagacg gcgtttctat cccagtaacc
     1201 gtaatcgaag ttgaagcaaa ccgcgttact caggttaaag acctggctaa cgatggctac
     1261 cgtgctattc aggtgaccac cggtgctaaa aaagctaacc gtgtgaccaa gcctgaagct
     1321 ggccacttcg ctaaagctgg cgtagaagct ggccgtggtc tgtgggaatt ccgcctggct
     1381 gaaggcgaag agttcactgt aggtcagagc attagcgttg aactgtttgc tgacgttaaa
     1441 aaagttgacg taactggcac ctctaaaggt aaaggtttcg caggtaccgt taagcgctgg
     1501 aacttccgta cccaggacgc tactcacggt aactccttgt ctcaccgcgt tccgggttct
     1561 atcggtcaga accagactcc gggcaaagtg ttcaaaggca agaaaatggc aggtcagatg
     1621 ggtaacgaac gtgtaaccgt tcagagcctt gacgtagtac gcgttgacgc tgagcgcaac
     1681 ctgctgctgg ttaaaggtgc tgtcccgggt gcaaccggta gcgacctgat cgttaaacca
     1741 gctgtgaagg cgtaaggaga tagcaatgga attagtattg aaagacgcgc agagcgcgct
     1801 gactgtttcc gaaactacct tcggtcgtga tttcaacgaa gcgctggttc accaggttgt
     1861 tgttgcttat gcagctggtg ctcgtcaggg tactcgtgct cagaagactc gtgctgaagt
     1921 aactggttcc ggtaaaaaac cgtggcgcca gaaaggcacc ggccgtgcgc gttctggttc
     1981 tatcaagagc ccgatctggc gttctggtgg cgtgaccttt gctgctcgtc cgcaggacca
     2041 cagtcaaaaa gttaacaaga agatgtaccg cggcgcgctg aaaagcatcc tgtccgaact
     2101 ggtacgtcag gatcgtctga tcgttgtcga gaagttctct gtagaagcgc cgaaaactaa
     2161 gctgctggca cagaaactga aagacatggc tctggaagat gtgctgatca tcaccggtga
     2221 gctggacgaa aacctgttcc tggctgcgcg caacctgcac aaggttgacg tacgcgatgc
     2281 aactggtatc gacccggtta gcctgatcgc cttcgacaaa gtcgtaatga ctgctgatgc
     2341 tgttaagcaa gttgaggaga tgctggcatg attcgtgaag aacgtctgct gaaggtgctg
     2401 cgtgcaccgc acgtttctga aaaagcgtct actgcgatgg aaaaatccaa caccatcgta
     2461 ctcaaagttg ctaaagacgc gaccaaagca gaaatcaaag ctgctgtgca gaaactgttt
     2521 gaagtcgaag tcgaagtcgt taacaccctg gtagttaaag ggaaagttaa acgtcacgga
     2581 cagcgtatcg gtcgtcgtag cgactggaaa aaagcttacg tcaccctgaa agaaggccag
     2641 aatctggact tcgttggcgg cgctgagtaa gtcggaggag taatacaatg gcagttgtta
     2701 aatgtaaacc gacatctccg ggtcgtcgcc acgtagttaa agtggttaac cctgagctgc
     2761 acaagggcaa accttttgct ccgttgctgg aaaaaaacag caaatccggt ggtcgtaaca
     2821 acaatggccg tatcaccact cgtcatatcg gtggtggcca caagcaggct taccgtattg
     2881 ttgacttcaa acgcaacaaa gacggtatcc cggcagttgt tgaacgtctt gagtacgatc
     2941 cgaaccgttc cgcgaacatc gcgctggttc tgtacaaaga cggtgaacgc cgttacatcc
     3001 tggcccctaa aggcctgaaa gctggcgacc agattcagtc tggcgttgat gctgcaatca
     3061 aaccaggtaa caccctgccg atgcgcaaca tcccggttgg ttctactgtt cataacgtag
     3121 aaatgaaacc aggtaaaggc ggtcagctgg cacgttccgc tggtacttac gttcagatcg
     3181 ttgctcgtga tggtgcttat gtcaccctgc gtctgcgttc tggtgaaatg cgtaaagtag
     3241 aagcagactg ccgtgcaact ctgggcgaag ttggcaatgc tgagcatatg ctgcgcgttc
     3301 tgggtaaagc aggtgctgca cgctggcgtg gtgttcgtcc gaccgttcgc ggtaccgcga
     3361 tgaacccggt agaccaccca catggtggtg gtgaaggtcg taactttggt aagcacccgg
     3421 taactccgtg gggcgttcag accaaaggta agaagacccg cagcaacaag cgtactgata
     3481 aattcatcgt acgtcgccgt agcaaataat tttagaggat aagccatgcc acgttctctc
     3541 aagaaaggtc cttttattga cctgcacttg ctgaagaagg tagagaaagc ggtggaaagc
     3601 ggagacaaga agcccctgcg cacttggtcc cgtcgttcaa cgatctttcc taacatgatc
     3661 ggtttgacca tcgctgtcca taatggtcgt cagcacgttc cggtatttgt aaccgacgaa
     3721 atggtcggtc acaaactggg tgaattcgca ccgactcgta cttatcgcgg ccacgctgct
     3781 gataaaaaag cgaagaagaa ataaggtagg aggaagagat ggaaactatc gctaaacatc
     3841 gccatgctcg ttcttctgct cagaaggttc gccttgttgc tgacctgatt cgcggtaaga
     3901 aagtgtcgca ggctctggat attttgacct acaccaacaa gaaagcggct gtactggtca
     3961 agaaagttct ggaatctgcc attgctaacg ctgaacacaa cgatggcgct gacattgacg
     4021 atctgaaagt tacgaaaatt ttcgtagacg aaggcccgag catgaagcgc attatgccgc
     4081 gtgcaaaagg tcgtgcagat cgcatcctga agcgcaccag ccacatcact gtggttgtgt
     4141 ccgatcgctg agactctgga gactagcaat gggtcagaaa gtacatccta atggtattcg
     4201 cctgggtatt gtaaaaccat ggaactctac ctggtttgcg aacaccaaag aattcgctga
     4261 caacctggac agcgatttta aagtacgtca gtacctgact aaggaactgg ctaaagcgtc
     4321 cgtatctcgt atcgttatcg agcgtccggc taagagcatc cgtgtaacca ttcacactgc
     4381 tcgcccgggt atcgttatcg gtaaaaaagg tgaagacgta gaaaaactgc gtaaggtcgt
     4441 agcggacatc gctggcgttc ctgcacagat caacatcgcc gaagttcgta agcctgaact
     4501 ggacgcaaaa ctggttgctg acagcatcac ttctcagctg gaacgtcgcg ttatgttccg
     4561 tcgtgctatg aagcgtgctg tacagaacgc aatgcgtctg ggcgctaaag gtattaaagt
     4621 tgaagttagc ggccgtctgg gcggcgcgga aatcgcacgt accgaatggt accgcgaagg
     4681 tcgcgtaccg ctgcacactc tgcgtgctga catcgactac aacacctctg aagcgcacac
     4741 cacttacggt gtaatcggcg ttaaagtgtg gatcttcaaa ggcgagatcc tgggtggtat
     4801 ggctgctgtt gaacaaccgg aaaaaccggc tgctcagcct aaaaagcagc agcgtaaagg
     4861 ccgtaaataa ggagcgtcgc tgatgttaca accaaagcgt acaaaattcc gtaaaatgca
     4921 caaaggccgt aaccgcggtc tggcgcaggg tacggatgtt agcttcggca gcttcggtct
     4981 gaaagctgtt ggccgtggtc gtctgactgc ccgtcagatc gaagcagcac gtcgtgctat
     5041 gacccgtgca gttaagcgtc aaggtaagat ctggatccgt gtgttcccgg acaaaccgat
     5101 cactgaaaag ccgctggcag tgcgtatggg taaaggtaaa ggtaacgtgg agtattgggt
     5161 tgccttgatt cagccgggta aagtcctgta tgaaatggac ggtgttccgg aagagctggc
     5221 ccgtgaagca ttcaagctgg cagcagcgaa actgccgatt aaaaccacct ttgtaactaa
     5281 gacggtgatg taatgaaagc aaaagagctg cgtgagaaga gcgttgaaga gctgaacacc
     5341 gagctgctga acctgctgcg tgagcagttc aacctgcgta tgcaggctgc aagtggccag
     5401 ctgcaacagt ctcacctgtt gaagcaagtg cgtcgcgatg tcgcacgcgt taagacttta
     5461 ctgaacgaga aggctggtgc gtaatgaccg ataaaatccg tactctgcaa ggtcgcgttg
     5521 ttagcgacaa aatggagaaa tccattgttg ttgctatcga acgttttgtg aaacacccga
     5581 tctacggtaa attcatcaag cgtacgacca aactgcacgt acatgacgag aacaacgaat
     5641 gcggtatcgg tgacgtggtt gaaatccgcg aatgccgtcc gctgtccaag actaaatcct
     5701 ggacgctggt tcgcgttgta gagaaagcgg ttctgtaata cagtacactc tctcgatacg
     5761 aataaacggc tcagaaatga gccgtttatt ttttctaccc atatccttga agcggtgtta
     5821 taatgccgcg ccctcgatat ggggattttt aacgacctga ttttcgggtc tcagtagtag
     5881 ttgacattag cggagcacta aaatgatcca agaacagact atgctgaacg tcgccgacaa
     5941 ctccggtgca cgtcgcgtaa tgtgtatcaa ggttctgggt ggctcgcacc gtcgctacgc
     6001 aggcgtaggc gacatcatca agatcaccat caaagaagca attccgcgtg gtaaggtcaa
     6061 aaaaggtgat gtgctgaagg cggtagtggt gcgcaccaag aagggtgttc gtcgcccgga
     6121 cggttctgtc attcgcttcg atggtaatgc ttgtgttctt ctgaacaaca acagcgagca
     6181 gcctatcggt acgcgtattt ttgggccggt aactcgtgag cttcgtagtg agaagttcat
     6241 gaaaattatc tctctggcac cagaagtact ctaaggagcg aatcatggca gcgaaaatcc
     6301 gtcgtgatga cgaagttatc gtgttaaccg gtaaagataa aggtaaacgc ggtaaagtta
     6361 agaatgtcct gtcttccggc aaggtcattg ttgaaggtat caacctggtt aagaaacatc
     6421 agaagccggt tccggccctg aaccaaccgg gtggcatcgt tgaaaaagaa gccgctattc
     6481 aggtttccaa cgtagcaatc ttcaatgcgg caaccggcaa ggctgaccgt gtaggcttta
     6541 gattcgaaga cggcaaaaaa gtccgtttct tcaagtctaa cagcgaaact atcaagtaat
     6601 ttggagtagt acgatggcga aactgcatga ttactacaaa gacgaagtag ttaaaaaact
     6661 catgactgag tttaactaca attctgtcat gcaagtccct cgggtcgaga agatcaccct
     6721 gaacatgggt gttggtgaag cgatcgctga caaaaaactg ctggataacg cagcagcaga
     6781 cctggcagca atctccggtc aaaaaccgct gatcaccaaa gcacgcaaat ctgttgcagg
     6841 cttcaaaatc cgtcagggct atccgatcgg ctgtaaagta actctgcgtg gcgaacgcat
     6901 gtgggagttc tttgagcgcc tgatcactat tgctgtacct cgtatccgtg acttccgtgg
     6961 cctgtccgct aagtctttcg acggtcgtgg taactacagc atgggtgtcc gtgagcagat
     7021 catcttccca gaaatcgact acgataaagt cgaccgcgtt cgtggtttgg atattaccat
     7081 taccactact gcgaaatctg acgaagaagg ccgcgctctg ctggctgcct ttgacttccc
     7141 gttccgcaag taaggtaggg ttactaaatg gctaagcaat caatgaaagc acgcgaagta
     7201 aaacgcgtag ctttagctga taaatacttc gcgaaacgcg ctgaactgaa agcgatcatc
     7261 tctgatgtga acgcttccga cgaagatcgt tggaacgctg ttctcaagct gcagactctg
     7321 ccgcgtgatt ccagcccgtc tcgtcagcgt aaccgctgcc gtcaaacagg tcgtccgcat
     7381 ggtttcctgc ggaagttcgg gttgagccgt attaaggtcc gtgaagccgc tatgcgcggt
     7441 gaaatcccgg gtctgaaaaa ggctagctgg taattgtcac caattgaatc acgggagtaa
     7501 agacagatga gcatgcaaga tccgatcgcg gatatgctga cccgtatccg taacggtcag
     7561 gccgcgaaca aagctgcggt caccatgcct tcctccaagc tgaaagtggc aatcgccaac
     7621 gtgctgaagg aagaaggttt tattgaagat tttaaagttg aaggcgacac caagcctgaa
     7681 ctggaactta ctctgaagta tttccagggc aaagctgttg tagaaagcat tcagcgtgtc
     7741 agccgcccag gtctgcgcat ctataaacgt aaagatgagc tgccgaaagt tatggcgggt
     7801 ctgggtatcg cagttgtttc tacctctaaa ggtgttatga ctgatcgtgc agcgcgccag
     7861 gctggtcttg gtggcgaaat tatctgctac gtagcctaat cggaggaaaa aatgtctcgt
     7921 gttgctaaag caccggtcgt tgttcctgcc ggcgttgacg taaaaatcaa cggtcaggtt
     7981 attacgatca aaggtaaaaa cggcgagctg actcgtactc tcaacgatgc tgttgaagtt
     8041 aaacatgcag ataataccct gaccttcggt ccgcgtgatg gttacgcaga cggttgggca
     8101 caggctggta ccgcgcgtgc cctgctgaac tcaatggtta tcggtgttac cgaaggcttc
     8161 actaagaagc tgcagctggt tggtgtaggt taccgtgcag cggttaaagg taatgtgatt
     8221 aacctgtctc tgggtttctc tcatcctgtt gaccatcagc tgcctgcggg tatcactgct
     8281 gaatgtccga ctcagactga aatcgtgctg aaaggcgctg ataagcaggt gatcggccag
     8341 gttgcagcgg atctgcgcgc ctaccgtcgt cctgagcctt ataaaggcaa gggtgttcgt
     8401 tacgccgacg aagtcgtgcg tatcaaagag gctaagaaga agtaaggtaa cactatggat
     8461 aagaaatctg ctcgtatccg tcgtgcgacc cgcgcacgcc gcaagctcca ggagctgggc
     8521 gcaactcgcc tggtggtaca tcgtaccccg cgtcacattt acgcacaggt aattgcaccg
     8581 aacggttctg aagttctggt agctgcttct actgtagaaa aagctatcgc tgaacaactg
     8641 aagtacaccg gtaacaaaga cgcggctgca gctgtgggta aagctgtcgc tgaacgcgct
     8701 ctggaaaaag gcatcaaaga tgtatccttt gaccgttccg ggttccaata tcatggtcgt
     8761 gtccaggcac tggcagatgc tgcccgtgaa gctggccttc agttctaagg tagaggtgta
     8821 agatggctca catcgaaaaa caagctggcg aactgcagga aaagctgatc gcggtaaacc
     8881 gcgtatctaa aaccgttaaa ggtggtcgta ttttctcctt cacagctctg actgtagttg
     8941 gcgatggtaa cggtcgcgtt ggttttggtt acggtaaagc gcgtgaagtt ccagcagcga
     9001 tccagaaagc gatggaaaaa gcccgtcgca atatgattaa cgtcgcgctg aataacggca
     9061 ctctgcaaca ccctgttaaa ggtgttcaca cgggttctcg cgtattcatg cagccggctt
     9121 ccgaaggtac cggtatcatc gccggtggtg caatgcgcgc cgttctggaa gtcgctgggg
     9181 ttcataacgt tctggctaaa gcatatggtt ccaccaaccc gatcaacgtg gttcgtgcaa
     9241 ctattgatgg cctggaaaat atgaattctc cagaaatggt cgctgccaag cgtggtaaat
     9301 ccgttgaaga aattctgggg aaataaacca tggcaaagac tattaaaatt actcaaaccc
     9361 gcagtgcaat cggtcgtctg ccgaaacaca aggcaacgct gcttggcctg ggtctgcgtc
     9421 gtattggtca caccgtagag cgcgaggata ctcctgctat tcgcggtatg atcaacgcgg
     9481 tttccttcat ggttaaagtt gaggagtaag agatgcgttt aaatactctg tctccggccg
     9541 aaggctccaa aaaggcgggt aaacgcttgg gtcgtggtat cggttctggc ctcggtaaaa
     9601 ccggtggtcg tggtcacaaa ggtcagaagt ctcgttctgg cggtggcgta cgtcgcggtt
     9661 tcgagggtgg tcagatgcct ctgtaccgtc gtctgccgaa attcggcttc acttctcgta
     9721 aagcagcgat tacagccgaa gttcgtctgt ctgacctggc taaagtagaa ggcggtgttg
     9781 tagacctgaa cacgctgaaa gcggctaaca ttatcggtat ccagatcgag ttcgcgaaag
     9841 tgatcctggc tggcgaagta acgactccgg taactgttcg tggcctgcgt gttactaaag
     9901 gcgctcgtgc tgctatcgaa gctgctggcg gtaaaatcga ggaataagta gcagatggct
     9961 aaacaaccgg gattagattt tcaaagtgcc aaaggtggct taggcgagct gaaacgcaga
    10021 ctgctgtttg ttatcggtgc gctgattgtg ttccgtattg gctcttttat tccgatccct
    10081 ggtattgatg ccgctgtact tgccaaactg cttgagcaac agcgaggcac catcattgag
    10141 atgtttaaca tgttctctgg tggtgctctc agccgtgctt ctatctttgc tctggggatc
    10201 atgccgtata tttcggcgtc gatcattatc cagctgctga cggtggttca cccaacgttg
    10261 gcggaaatta agaaagaagg ggagtctggt cgtcgtaaga tcagccagta cacccgctac
    10321 ggtactctgg tgctggcaat attccagtcg atcggtattg ctaccggtct gccgaatatg
    10381 cctggtatgc aaggcctggt gattaacccg ggctttgcat tctacttcac cgctgttgta
    10441 agtctggtca caggaacgat gttcctgatg tggttgggcg aacagatcac tgaacgaggt
    10501 atcggcaacg gtatttcaat cattatcttc gccggtattg tcgcgggact cccgccagcc
    10561 attgcccata ctatcgagca agcgcgtcaa ggcgacctgc acttcctcgt gttgctgttg
    10621 gttgcagtat tagtatttgc agtgacgttc tttgttgtat ttgttgagcg tggtcaacgc
    10681 cgcattgtgg taaactacgc gaaacgtcag caaggtcgtc gtgtctatgc tgcacagagc
    10741 acacatttac cgctgaaagt gaatatggcg ggggtaatcc cggcaatctt cgcttccagt
    10801 attattctgt tcccggcgac catcgcgtca tggttcgggg gcggtactgg ttggaactgg
    10861 ctgacaacaa tttcgctgta tttgcagcct gggcaaccgc tgtatgtgtt actctatgcg
    10921 tctgcaatca tcttcttctg tttcttctac acggcgttgg ttttcaaccc gcgtgaaaca
    10981 gcagataacc tgaagaagtc cggtgcattt gtaccaggaa ttcgtccggg agagcaaacg
    11041 gcgaagtata tcgataaagt aatgacccgc ctgaccctgg ttggtgcgct gtatattacc
    11101 tttatctgcc tgatcccgga gttcatgcgt gatgcaatga aagtaccgtt ctacttcggt
    11161 gggacctcac tgcttatcgt tgttgtcgtg attatggact ttatggctca agtgcaaact
    11221 ctgatgatgt ccagtcagta tgagtctgca ttgaagaagg cgaacctgaa aggctacggc
    11281 cgataattgg tcgcccgaga agttacggag agtaaaaatg aaagttcgtg cttccgtcaa
    11341 gaaattatgc cgtaactgca aaatcgttaa gcgtgatggt gtcatccgtg tgatttgcag
    11401 tgccgagccg aagcataaac agcgccaagg ctgatttttt cgcatatttt tcttgcaaag
    11461 ttgggttgag ctggctagat tagccagcca atcttttgta tgtctgtgcg tttccatttg
    11521 agtatcctga aaacgggctt ttcagcatgg aacgtacata ttaaatagta ggagtgcata
    11581 gtggcccgta tagcaggcat taacattcct gatcataagc atgccgtaat cgcattaact
    11641 tcgatttatg gcgtcggcaa gacccgttct aaagccatcc tggctgcagc gggtatcgct
    11701 gaagatgtta agatcagtga gctgtctgaa ggacaaatcg atacgctgcg tgacgaagtt
    11761 gccaaatttg tcgttgaagg tgatctgcgc cgtgaaatca gcatgagcat caagcgcctg
    11821 atggatcttg gttgctatcg cggcttgcgt catcgtcgtg gtctcccggt tcgcggtcag
    11881 cgtaccaaga ccaacgcacg tacccgtaag ggtccgcgca aaccgatcaa gaaataatcg
    11941 gggtgattga ataatggcaa aggcaccaat tcgtgcacgt aaacgtgtaa gaaaacaagt
    12001 ctctgacggc gtggctcata tccatgcttc tttcaacaac accatcgtga ctatcactga
    12061 tcgtcagggt aacgcgttgg gttgggcaac agccggtggt tccggtttcc gtggttctcg
    12121 caaatccact ccgtttgcag ctcaggttgc agcagagcgt tgcgctgacg ccgtgaaaga
    12181 atacggcatc aagaatctgg aagttatggt taaaggtccg ggtccaggcc gcgaatctac
    12241 tattcgtgct ctgaacgccg caggtttccg catcactaac attactgatg tgactccgat
    12301 ccctcataac ggttgtcgtc cgccgaaaaa acgtcgcgta taacgcctcg ttttccaggt
    12361 ttgttggaga aagaaaatgg caagatattt gggtcctaag ctcaagctga gccgtcgtga
    12421 gggcaccgac ttattcctta agtctggcgt tcgcgcgatc gataccaagt gtaaaattga
    12481 acaagctcct ggccagcacg gtgcgcgtaa accgcgtctg tctgactatg gtgtgcagtt
    12541 gcgtgaaaag caaaaagttc gccgtatcta tggtgtgctg gagcgtcagt tccgtaacta
    12601 ctacaaagaa gcagcacgtc tgaaaggcaa caccggtgaa aacctgttgg ctctgctgga
    12661 aggtcgtctg gacaacgttg tataccgtat gggcttcggt gccactcgtg cagaagcacg
    12721 tcagctggtt agccataaag caattatggt aaacggtcgt gttgttaaca tcgcttctta
    12781 tcaggttagt ccgaatgacg ttgtaagcat tcgtgagaaa gcgaagaagc agtctcgcgt
    12841 gaaagccgct ctggagctgg ctgagcagcg tgaaaagcca acttggctgg aagttgatgc
    12901 tggcaagatg gaaggtacgt ttaagcgtaa gccggagcgt tctgatctgt ctgcggacat
    12961 taacgaacac ctgatcgtcg agctttactc caagtaaagc ttagtaccaa agagaggaca
    13021 caatgcaggg ttctgtgaca gagtttctaa aaccgcgcct ggttgatatc gagcaagtga
    13081 gttcgacgca cgccaaggtg acccttgagc ctttagagcg tggctttggc catactctgg
    13141 gtaacgcact gcgccgtatt ctgctctcat cgatgccggg ttgcgcggtg accgaggttg
    13201 agattgatgg tgtactacat gagtacagca ccaaagaagg cgttcaggaa gatatcctgg
    13261 aaatcctgct caacctgaaa gggctggcgg tgagagttca gggcaaagat gaagttattc
    13321 ttaccttgaa taaatctggc attggccctg tgactgcagc cgatatcacc cacgacggtg
    13381 atgtcgaaat cgtcaagccg cagcacgtga tctgccacct gaccgatgag aacgcgtcta
    13441 ttagcatgcg tatcaaagtt cagcgcggtc gtggttatgt gccggcttct acccgaattc
    13501 attcggaaga agatgagcgc ccaatcggcc gtctgctggt cgacgcatgc tacagccctg
    13561 tggagcgtat tgcctacaat gttgaagcag cgcgtgtaga acagcgtacc gacctggaca
    13621 agctggtcat cgaaatggaa accaacggca caatcgatcc tgaagaggcg attcgtcgtg
    13681 cggcaaccat tctggctgaa caactggaag ctttcgttga cttacgtgat gtacgtcagc
    13741 ctgaagtgaa agaagagaaa ccagagttcg atccgatcct gctgcgccct gttgacgatc
    13801 tggaattgac tgtccgctct gctaactgcc ttaaagcaga agctatccac tatatcggtg
    13861 atctggtaca acgtaccgag gttgagctcc ttaaaacgcc taaccttggt aaaaaatctc
    13921 ttactgagat taaagacgtg ctggcttccc gtggactgtc tctgggcatg cgcctggaaa
    13981 actggccacc ggcaagcatc gctgacgagt aaccggatca caggttaagg ttttactgag
    14041 aaggataagg tcatgcgcca tcgtaagagt ggtcgtcaac tgaaccgcaa cagcagccat
    14101 cgccaggcta tgttccgcaa tatggcaggt tcactggttc gtcatgaaat catcaagacg
    14161 actctgccta aagcgaaaga gctgcgccgc gtagttgagc cgctgattac tcttgccaag
    14221 actgatagcg ttgctaatcg tcgtctggca ttcgcccgta ctcgtgataa cgagatcgtg
    14281 gcaaaactgt ttaacgaact gggcccgcgt ttcgcgagcc gtgccggtgg ttacactcgt
    14341 attctgaagt gtggcttccg tgcaggcgac aacgcgccga tggcttacat cgagctggtt
    14401 gatcgttcag agaaagcaga agctgctgca gagtaatctg aagcaacgta aaaaaacccg
    14461 ccccggcggg tttttttata cccgtagcat ccccacttat ctacaatagc tgtactcttt
    14521 ttgttcatcc cctggagtat ttatgtggtt acttgaccag tgggcagagc gtcatatagc
    14581 agaagcgcaa gcgaaaggtg agtttgataa tctggcaggt agcggcgaac cattgatact
    14641 ggatgatgat tctcatgtgc caccggaatt acgtgcgggg tatcgcttgc tgaagaatgc
    14701 tggttgctta ccgccagaac ttgagcagcg gagggaagca attcagcttc tggatatcct
    14761 gagaggtatc cgtcacgatg atccgcaata tcaagaggtt agccgtcgat tgtcattact
    14821 ggaattgaag ctgcgacaag ctggatttag taccgatttt ttacgcggcg attatgctga
    14881 caagttgttg gacaaaatca acgataacta gtggagtatg tatgtatcgc attggtgagc
    14941 tggcaaaaat ggcggaagta acacctgaca cgattcgtta ttacgaaaaa cagcagatga
    15001 tggagcatga agtgcgtact gaaggcgggt ttcgcctgta taccgaaagc gatctccagc
    15061 gattgaaatt tatccgccat gccagacaac taggtttcag tctggagtcg atccgcgagt
    15121 tgctgtcgat ccgcatcgat cctgaacacc atacctgtca ggagtcaaaa ggcattgtgc
    15181 aggaaagatt gcaggaagtc gaagcacgga tagccgagtt gcagagtatg cagcgttcct
    15241 tgcaacgcct taacgatgcc tgttgtggga ccgcccatag cagtgtttat tgttcgattc
    15301 ttgaagctct tgaacaaggg gcgagtggcg ttaagagtgg ctgttgattt tttgcactgg
    15361 caggattaca ctcgcgccgt aaaataacca attggagttt ttatgagccg atatcagcat
    15421 actaaagggc agataaggga taatgcgata gaagcattac tacatgatcc cttattccga
    15481 cagcgcgtag agaaaaataa gaaggggaaa ggcagttaca tgcgaaaagg aaaacatggc
    15541 aatcggggga actgggaggc cagtggcaag aaagtaaatc acttttttac cactggtctt
    15601 ctgctttcag gcgcttgtta agagcggtta ttctgctctt tcagcaaatc acgaatttct
    15661 gccagtaata cttcttcttt agttggtgca ggtgcggcag ctggttcttc ttttttccga
    15721 ttcagtttgt tgattagctt aatcgccata aagatggcaa aggccacaat cagaaaatca
    15781 aagacgtttt gaatgaagac accgtaatgc atcacaacag cagggatatc cccctgcgca
    15841 tcgcgtagcg tgacagcaaa ctgtttaaag tcgatcccgc caattaataa gcccagaggt
    15901 ggcatgatga tatcggcaac cagtgaagat acaatcttcc cgaatgccgc accgataatg
    15961 acacccaccg ccaaatccac cacgttcccg cgcatcgcaa attcgcgaaa ttctttaata
    16021 atgctcatgt tattctccct atgaagccga caaccataag tctaacaaat gttaagccat
    16081 tttcctgcca ggaatgaatt taattaatcc ttgataatca aagggaaata ataaggcgtc
    16141 attagacgcc ttattaatta caagaagaaa gggcttggct ggaagagtct ttcgacgtcg
    16201 gtaataaact ttttatctgt gaggaacata attacgtgat cgccttgctc aatgcgcaga
    16261 ttgtcattgg caatcatcac gtcgtttcca cgtaccaccg ctccaataat cgttcctggc
    16321 ggtagcttga tttcgtcaat gactctgccg acaacgcgtg aggtgctttc atcaccgtga
    16381 gcaacggctt caatagcttc tgctacgccg cggcgcaatg aggaaacacc aacaatatct
    16441 gcttttcgca catggctaag caacgcagaa atagttgctt gttgtggtga aattgcaata
    16501 tcgatcacgc tcccctgaac cagatccaca taagcgcgac gctggatcaa taccatcacc
    16561 tttttcgcac ccatacgttt ggcaagcatg gcggacatga tattggcctc gtcatcgttg
    16621 gtgacggcaa taaacagatc aacttgatcg atatgttctt cggccagcag ttcttgatcc
    16681 gacgcatcac caaaaaagac gatcgtattc tgcaactttt ccgccagttc ggcagcgcgc
    16741 tgctgattac gttcgatgag tttaacgttg taatcttttt ccagacgacg cgccagccct
    16801 gcaccgatat taccgccacc aaccagcatg atccgcttat acggtttttc cagtcgctgt
    16861 aattcactca tcaccgcgcg gatatgctgt gaagcggcaa taaagaacac ttcatcacca
    16921 gcttcaacaa tggtcgaacc ttgtggacga atggggcgat cgtggcggaa aattgctgcc
    16981 acacgagtat cgatatgtgg catatgttcg cgcatggtcg aaagtgcatt accaatcagc
    17041 gggccgccat aataggcttt aactacagcg aggctgactt taccctcagc gaagttcacc
    17101 acctgcaatg cgcctggata ctcaatcagt cggtaaatat tatcgataac caactgctct
    17161 ggtgcgatca gatgatcaat cggtacagca tctgaatgaa atagcttatc ggcatcgcgt
    17221 acgtagtctg gtgagcggat gcgagcgatg cgattagggg tgttgaaaag tgagtaggct
    17281 acctggcagg caaccatatt ggtttcatct gaactggtta cagcaaccag catatcggcg
    17341 tcgtcggcac ctgcctcccg caatacgcgt ggatgagagc catgcccctg cacgactcgc
    17401 aggtcaaatt tatcctgcaa ggtccgcaga cgctcaccgt tggtatcgac aacagtaata
    17461 tcgttgttct cgccaaccag gttttccgcc agtgtgccgc caacctggcc ggcacccaga
    17521 atgataattt tcatcagtct cgacccgtta tctcatcact ttttgattag cttagcgtaa
    17581 aagaagccgt cgccctcttc ggcaccaggc agattttgtt tacccggttg ctctggtgtt
    17641 cctgtttcgc aaagttcggc atcagcggta cgttgcaaaa aagctttaat ctgcaggcta
    17701 ttctcttccg gtaacaccga acaggtggca tagaccaggg ttccaccgga ttttaaatgc
    17761 ggccaaatgg cgtcgagaat ttcagactgc aattgcgcga gttccgggat atcgcgatcg
    17821 cgacgtaacc atttaatatc cggatggcga cgaatcaccc ccgttgctga acaaggcgca
    17881 tctaataaaa tgcgatcaaa ctgttgctcg ccacaccatt gggaagggta acggccatca
    17941 ccttgtttca cggttgcctt cataccaagg cgttttaaat tgtcgtaaac gcgagagagg
    18001 cgctgttcgt caatatcaac cgcaacaacc tgcgcttctg gtgccacctc aaggatatgc
    18061 gttgttttac cgccgggggc ggcacaaaga tccagaatgt gttcaccgtt ttgtggcgca
    18121 agccaggtca tgcaaccttg tgctgatgca tcctgaacgg taacccatcc gtcttcaaaa
    18181 ccaggtagcg catgaacagg tgcaggtgtt tccagacgta cagcatcagg gtaatccgca
    18241 tgcgggaaac ctttcattcc tgcttcatcc agcaatgcaa gccagctgtc gcgggaatga
    18301 tgcgtacgat taacgcgcag ccacattggc ggacgctggt tattggcttc gacgatggat
    18361 tgccactgct ctggatacgc tttttgcaga cgcttcagca accaggaagg atgcagataa
    18421 cgtgcatcac tggcattaaa cttggctaat aactcttctt gctgacgctg gaactggcgt
    18481 aatacaccgt taatcaaccc tttaagttgc ggacgcttaa ttgcgatagc gccttcaacc
    18541 gtttcagcca gcgcagcatg aggtggaatg cgggtataaa gcagttgata caaaccaacc
    18601 ataatcaggt aatgcacagt gcgctgtttg ccggtcatcg gacgggccat taacttatta
    18661 atcagccagt ctaactgcga aagcgtacgc agtacgccaa agcacaactc ttgaagaagt
    18721 gctttgtctt tatcagaaac tttttgctgg agcggtggca gaatgttgct taatgattgc
    18781 ccttgctcga cgacttgttc aacggcctgg gccgccatgc tacgtaaatt acgttgtttt
    18841 ttcataagta taaaaatgcc cggtaagacc gggcttagaa gagtggacta tcaggccaga
    18901 cggttgcccg gaacaaacca ttcccgacga gaattcagga ggtcttgcgc gctcatcgct
    18961 ttcttacccg caggttgtaa cgagagcaga ttcaggattc catcaccagt tgcaacctga
    19021 atgccttgtt tgttggcttc aaggatcgtt cctggtgcag cgttggttgc cgtatcaatg
    19081 accgacgctt tccagacttt aaccggctgt ctttcaattt ccagccagct cattggccat
    19141 ggattgaaag cgcgaatgta gcgttcaagc tgtgctgccg aaagtgacca gtcaatacgc
    19201 gcttcttctt tactcaactt ttcggcgtaa gtgacaagag tttcgtcctg aacttctggt
    19261 ttcgccgtgc cgtctgccag ttgtttcaac gtggtgataa gcccttgtgg gccaagctct
    19321 gccagcttgt cgtacagcgt accactggta tcttctgcag taatcgggca ggagagctta
    19381 tagagcatgt caccggtgtc taaaccgaca tccatttgca taatggtcac accagtttct
    19441 gcatcacccg cccatagtga gcgttggatt ggtgcagcac cgcgccagcg tggcagcagt
    19501 gaaccatgaa cgttgataca gccaagacgc ggcatctcca gcactgcttt aggcagaatt
    19561 aagccatagg cgacgacgac cataacatca gcctgcagat cggcgaccag ttgctggttt
    19621 tcttgtggac gcagggaaac aggttgaaaa acgggcagac ctttttcctc agccagaact
    19681 ttaaccgggc tgggcatcag ttttttaccg cgtcctgccg gtcggtctgg ctgggtgaac
    19741 acgccaacga cgttatgacc agaagacaac agcgcgtcga gatgacgcgc tgcaaagtca
    19801 ggtgtacccg caaaaataat acgtagtgat tctgacacgt tagttcttat ccttaagccc
    19861 gggctttcag acgatccagt ttttcaactt tctgacgaat acgttgttgt ttcaacggtg
    19921 acagataatc cataaacagt ttgccgacca ggtgatccat ctcatgctga atacagatgg
    19981 ctaacagacc gtctgcttcc aattcaaatg gtttaccgtc gcggtccagg gcgcgaattt
    20041 taactttctc tgcgcgtggc actaaagcac gttgttcagg gatcgacagg caaccttctt
    20101 caatgcctgt ttcgccgctt ttttctaaaa gctccggatt gattaacacc agccgttcgt
    20161 cacggttttc cgaaacatca ataacaatga tacgttgatg gatatcaacc tgggttgccg
    20221 ccaggccaat accttcttct gcgtacatcg tctcgaacat atcatcgacg atacgctgaa
    20281 tttctgcatt cacttcttct accggtttag caactttgcg aagccgctcg tccggaatat
    20341 gtaacacttg caaaactgac ataaatctcc agagatgtgt tcaggagtta gaaagattat
    20401 ttcttctatt ctagacaaat ccccctctga ttgacagcat cactgaccaa tcgcaaagat
    20461 tgctaaggct gcttatggca gggagataag gatggtcgat acagatattt ggctgcgttt
    20521 aatgagcatc agcagcttgt acggcgatga tatggtccgt atagctcact ggctggcaaa
    20581 acagtcgcat attgatgcgg ttgtattgca gcaaacaggg cttacattgc ggcaggcaca
    20641 acgctttctt tcatttccgc gaaagagtat cgaaagctca ctttgttggt tggagcaacc
    20701 caaccatcat ttaatccctg cggacagcga attttatcct cctcaacttc tggcgacgac
    20761 agattacccc ggcgcactgt ttgttgaagg agaactgtac gcgctgcatt catttcagct
    20821 tgccgtagtg gggagtcggg cgcattcatg gtatggcgag cgatggggac gattattttg
    20881 cgaaactctg gccacgcgtg gagtgacaat tacgagtgga ctggcgcgtg gaatcgatgg
    20941 tgtggcgcat aaagcggcct tacaggtaaa tggcgtcagc attgctgtat tggggaacgg
    21001 acttaatacc attcatccgc gccgccatgc ccgactggct accagtttgc ttgaacatgg
    21061 tggggcactt gtctcggaat ttcccctcga tgtttcaccc cttgcttaca atttcccacg
    21121 aagaaatcgc attatcagtg gtctaagtaa aggtgtactg gtggtggaag cggctttgcg
    21181 cagtggttcg ttggtgacag cacgttgtgc gcttgagcag gggcgtgaag tttttgcctt
    21241 gccaggacca atagggaatc cgggaagcga agggcctcac tggttaataa aacaaggtgc
    21301 gattcttgtg acggaaccgg aagaaattct ggaaaacttg caatttggat tgcactggtt
    21361 gccagacgcc cctgaaaatt cattttattc accagatcag caagacgtgg cattgccatt
    21421 tcctgagctc ctggctaacg taggagatga ggtaacacct gttgacgtcg tcgctgaacg
    21481 tgccggccaa cctgtgccag aggtagttac tcaactactc gaactggagt tagcaggatg
    21541 gatcgcagct gtacccggcg gctatgtccg attgaggagg gcatgccatg ttcgacgtac
    21601 taatgtattt gtttgaaacc tatattcaca cagaagctga gttgcgtgtg gatcaagaca
    21661 aacttgaaca ggatcttacc gacgcaggat ttgatcgaga agatatctac aatgccctgc
    21721 tttggctgga aaagcttgcg gattatcagg aaggactgac agaaccgatg caactggcct
    21781 ctgatccact ctccatgcgt atttataccc ctgaggagtg tgaaagactg gatgccagct
    21841 gtcgtggttt tctgcttttc cttgagcaaa ttcaggtgct taaccttgaa atccgtgaaa
    21901 tggtgataga gcgagtgctc gcgctggata ccgcagagtt cgacctggaa gacctgaaat
    21961 gggtaatcct gatggtgttg ttcaatattc cgggctgcga aaatgcgtac cagcaaatgg
    22021 aagaattact ctttgaagtg aatgaaggta tgctgcatta atcatttctt taattcagca
    22081 taagttgtta tggcgaaatc agcactgttc acggtgcgta ataatgagtc ctgcccaaag
    22141 tgcggggctg aactggttat tcgatccggg aaacacggtc cgtttcttgg atgctcacag
    22201 tatccggcgt gtgactacgt ccgtcctctg aaatcttcag cggatggaca tattgtcaaa
    22261 gttctggagg ggcaggtttg ccctgcatgt ggcgcaaatc tggtattacg ccagggacgc
    22321 tttggtatgt ttattggttg cagtaactac cctgaatgcg aacataccga acttatcgat
    22381 aaaccggacg aaacagcaat tacatgcccc caatgtcgga cgggccatct ggtccagcgc
    22441 cgctcccgtt atggcaaaac atttcactcc tgtgatcgct acccggagtg tcaatttgcc
    22501 attaacttca aacccatagc tggagaatgc cctgagtgtc attatccact actcatcgaa
    22561 aagaaaaccg cgcagggtgt aaaacacttt tgtgccagta aacaatgtgg aaagccggtt
    22621 tcggcggaat aataacgtga ataataacct gcaaggagac gctatcgcag ctgcgataga
    22681 tgtcctcaat gaagaacgtg tcatcgccta tccaacggaa gccgttttcg gtgttgggtg
    22741 cgatcctgat agcgaaacag cagtgatgag actgttggag ttaaaacagc gtccggttga
    22801 taaggggctg attttaatcg cggcaaatta cgagcagctt aaaccctata ttgatgacac
    22861 catgctgact gatgcgcagc gtgaaaccat tttttcccgc tggccaggtc ctgtcacctt
    22921 tgtctttccc gcgcctgcga caacaccgcg ctggttgacg ggccgctttg attcgcttgc
    22981 tgtacgagtc accgaccatc cgttggtggt tgctttgtgc caggcttatg gtaaaccgct
    23041 ggtttctacc agtgccaact tgagtggatt gccaccttgt cgaacagtag acgaagttcg
    23101 cgcacaattt ggcgcggcgt tcccggttgt gcttggtgaa acgggggggc gtttaaatcc
    23161 ttcagaaatc cgcgatgccc tgacgggtga actgtttcga caggggtaac ataatggaaa
    23221 cctatgctgt ttttggtaat ccgatagccc acagcaaatc gccattcatt catcagcaat
    23281 ttgctcagca actgaatatt gaacatccct atgggcgcgt gttggcaccc atcaatgatt
    23341 tcatcaacac actgaacgct ttctttagtg ctggtggtaa aggtgcgaat gtgacggtac
    23401 cttttaaaga agaggctttt gccagagcgg atgagcttac tgaacgggca gcgttggctg
    23461 gtgctgttaa taccctcaag cggttagaag atggacgctt gcagggtgac aataccgatg
    23521 gtataggttt gttaagcgat ctggaacgtc tgtcttttat ccgtccgggt ttacgtattc
    23581 tgcttatcgg cgctggtgga gcatctcgcg gcgtactact accactcctt tccctggact
    23641 gtgcggtgac aatcactaat cggacggtat cccgtgcgga agagttggct aaattgtttg
    23701 cgcacactgg cagtattcag gcgttgggta tggacgaact ggaaggtcat gagtttgatc
    23761 tcattattaa tgcaacatcc agtggcatca gtggtgatat tccggcgatc ccgtcatcgc
    23821 tcattcatct aggcatttat tgctatgaca tgttctatca gaaaggaaaa actccttttc
    23881 tggcatggtg tgagcagcga ggctcaaagc gtaatgctga tggtttagga atgctggtgg
    23941 cacaggcggc tcatgccttt cttctctggc acggtgttct gcctgacgta gaaccagtta
    24001 taaagcaatt gcaggaggaa ttgtccgcgt gaatcaggcc atccagtttc cggacaggga
    24061 agagtgggac gagaataaaa aatgtgtatg ttttcccgct ctcgtgaatg gtatgcaact
    24121 gacatgcgcg atctctggcg agagtctggc gtatcgcttt actggagata cgccagaaca
    24181 gtggttagcg agttttcgtc agcatcgctg ggacctggaa gaagaagcgg aaaacttaat
    24241 tcaggaacaa agtgaagatg atcaaggctg ggtctggtta ccctgatcca gatattcgtc
    24301 cttccatttc acgtaattat tcgcggaata gcgtaaccca gccttctctt catcacttaa
    24361 cgggcggatc tgtttgacgg ggctaccgag atacagatat ccgctctcca gccgtttatt
    24421 ttgtgggacc agactacccg caccaatcat cacatcatct tctactattg cgccatcaag
    24481 taaaattgag cccatcccaa ccaaaactcg attgccaatg gtgcagccgt ggagcatcac
    24541 cttgtgacca acagtgacat cttcgccaat ggttaatggg ttgccatctg ggttgtacga
    24601 ggatttatga gtgacatgca acatactgcc atcctggata ttggtgcgtg ctccgatctg
    24661 tacataatgt acatctccac gaatcacaac gagcggccag atccccacat catcagccag
    24721 acgaacgcca ccaatcacga cactgctatc gtcgatcatt acgcgctgac cgatttgtgg
    24781 aaaaagatcg cggtatgggc gtaaaacatc agacatactt acctcagcaa taaatgattt
    24841 actaatgact ttgggggcat tattggcctt gtgcaagtct tttagtatgc aaaaaagcac
    24901 cgttttgtgt gcgattgcag caaaaagggt gaaaaaacaa caaacagaaa aaaagatcaa
    24961 aaaaatactt gtgcaaaata ttgggatccc tataatgcgc ctccgttaag acgacaacgt
    25021 gaaacacttc acaggatggt cggaacaacg aagagaaaaa atcctgaaat tcagggttga
    25081 ctctgaaaga ggaaagcgta atatacgcca cctcgcgaca gtgagctgaa agccgcgtcg
    25141 caactgctct ttaacaattt atcagacaat ctgtgtgggc actcgaagat acggattctt
    25201 aacgtcgcaa gacgaaaaat gaataccaag tctcaagagt ga
//
LOCUS       DADMJE010000046        25118 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.047, whole genome shotgun sequence.
ACCESSION   DADMJE010000046 DADMJE010000000
VERSION     DADMJE010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25118
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.047"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..393
                     /gene="hyfA"
                     /locus_tag="JN001_001720"
     CDS             <1..393
                     /gene="hyfA"
                     /locus_tag="JN001_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfA"
                     /protein_id="HAY9052986.1"
                     /translation="QLNESLCIGCKLCAVVCPFGAISASGSRPVNAPAQYVFQADGSL
                     KDGEENAPTQHALLRWEPGVQTVAVKCDLCNFLPEGPACVRACPNQALRLITDDSLQR
                     QMKEKQRLAASWFANGGEDPLSLTQEQH"
     gene            393..2410
                     /gene="hyfB"
                     /locus_tag="JN001_001721"
                     /pseudo
     CDS             393..2410
                     /gene="hyfB"
                     /locus_tag="JN001_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311371.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
     gene            2421..3368
                     /gene="hyfC"
                     /locus_tag="JN001_001722"
     CDS             2421..3368
                     /gene="hyfC"
                     /locus_tag="JN001_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311372.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit HyfC"
                     /protein_id="HAY9052987.1"
                     /translation="MRQTLCDGYLVIFALAQAVILLLLTPLFTGISRQIRARMHSRRG
                     PGIWQDYREIHKLFKRQEVAPISSGLMFRLMPWVLISSMLVLAMALPLFITVSPFAGG
                     GDLITLIYLLALFRFFFALSGLDTGSPFAGVGASRELTLGILVEPMLILSLLVLALIA
                     GSTHIEMISNTLATGWNSPLTTVLALLACGFACFIEMGKIPFDVAEAEQELQEGPLTE
                     YSGAGLALAKWGLGLKQVVMAALFVALFLPFGRAQELSLACLLTSLVVTLLKVLLIFV
                     LASIAENTLARGRFLLIHHVTWLGFSLAALAWVFWLTGL"
     gene            3385..3495
                     /locus_tag="JN001_001723"
     CDS             3385..3495
                     /locus_tag="JN001_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000429114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoin racemase"
                     /protein_id="HAY9052988.1"
                     /translation="MENLALTTLMLPFIGALVVSFSPQRRAAEWGFCSPH"
     gene            3507..4614
                     /locus_tag="JN001_001724"
                     /pseudo
     CDS             3507..4614
                     /locus_tag="JN001_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001442177.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit D"
     gene            4626..5276
                     /gene="hyfE"
                     /locus_tag="JN001_001725"
     CDS             4626..5276
                     /gene="hyfE"
                     /locus_tag="JN001_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 membrane subunit"
                     /protein_id="HAY9052989.1"
                     /translation="MIGSMIVNNLAGLMMLTSLFVISVKSYRLSCGFYACQSLVLVSI
                     FATLSCLFAAEQLLIWSASAFITKVLLVPLIMTYAARNIPQNIPEKALFGPAMMALLA
                     ALIVLLCAFVVQPVKLPMATGLKPALAVALGHFLLGLLCIVSQRNILRQIFGYCLMEN
                     GSHLVLALLAWRAPELVEIGIATDAIFAVIVMVLLARKIWRTHGTLDVNNLTALKG"
     gene            5281..6861
                     /gene="hyfF"
                     /locus_tag="JN001_001726"
     CDS             5281..6861
                     /gene="hyfF"
                     /locus_tag="JN001_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HAY9052990.1"
                     /translation="MSYSVMFALLLLTPLLFSLLCFACRKRGLSATCTVTVLHSLGIT
                     LLLILALWVVQTAADAGEIFAAGLWLHIDGLGGLFLAILGVIGFLTGVYSIGYMRHEV
                     AHGELSPVTLCDYYGFFHLFLFTMLLVVTSNNLIVMWAAIEATTLSSAFLVGIYGQRS
                     SLESAWKYIIICTVDVAFGLFGTVLVYANAASVMPQAEMAIFWSEVLKQSSLLDPTLM
                     LLAFVFVLIGFGTKTGLFPMHAWLPDAHSEAPSPVSALLSAVLLNCALLVLIRYYIII
                     CQAIGSDFPNRLLLIFGMLSVAVAAFFILVQRDIKRLLAYSSVENMGLVAVALGIGGP
                     LGIFAALLHTLNHSLAKTLLFCGSGNVLLKYGTRDLNVVCGMLKIMPFTAVLFGGGAL
                     ALAGMPPFNIFLSEFMTVTAGLARNHLLIIVLLLLLLTLVLAGLVRMAARVLMAKPPQ
                     AVNRGDLGWLTTSPMVILLVMMLAMGTHIPQPVIRILAGASTIVLSGTHDLPAQRSTW
                     HDFLPSGTASVSEKHSER"
     gene            6851..8566
                     /gene="hyfG"
                     /locus_tag="JN001_001727"
     CDS             6851..8566
                     /gene="hyfG"
                     /locus_tag="JN001_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfG"
                     /protein_id="HAY9052991.1"
                     /translation="MNVNSSSNSGEAILAALKTQFPGAVLDEERQTPEQVTITVKINL
                     LPDVVHYLYYQHDGWLPVLFGNDERTLNGHYAVYYALSMEGAEKCWIVVKALVDADSR
                     EFPSVTPRVPAAVWGEREIRDMYGLIPVGLPDQRRLVLPDDWPEDMHPLHKDAMDYRL
                     RPEPTTDSETYAFINEGNSDARVIPVGPLHITSDEPGHFRLFVDGEQIVDADYRLFYV
                     HRGMEKLAETRMGYNEVTFLSDRVCGICGFAHSVAYTNSVENALGIEVPQRAHTIRSI
                     LLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMTMAELLTGSRKTYGLNLIGG
                     VRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRTQGIGILDRQIARDYSPV
                     GPLIRGSGFARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMVRVKETFDSLAMLEFA
                     LDNMPDTPLLTEGFSYKPHAFALGFVEAPRGEDVHWSMLGDNQKLFRWRCRAATYANW
                     PVLRYMLRGNTVSDAPLIIGSLDPCYSCTDRVTLVDVRKRQSKTVPYKEIERYGIDRN
                     RSPLK"
     gene            8576..9115
                     /gene="hyfH"
                     /locus_tag="JN001_001728"
     CDS             8576..9115
                     /gene="hyfH"
                     /locus_tag="JN001_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit H"
                     /protein_id="HAY9052992.1"
                     /translation="MLKLLKTIMRAGTATVKYPFAPLEVSPGFRGKPDLMPSQCIACG
                     ACACPANALTIQTDDQQNSRTWQLYLGRCIYCGRCEEVCPTRAIQLTNNFELTVTNKA
                     DLYTRATFHLQRCSRCERPFAPQKTVALAAELLAQQQNAPQNREMLRAQASVCPECKQ
                     RATLINDDTDVPLVAKEQL"
     gene            9112..9870
                     /gene="hyfI"
                     /locus_tag="JN001_001729"
     CDS             9112..9870
                     /gene="hyfI"
                     /locus_tag="JN001_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 catalytic subunit HyfI"
                     /protein_id="HAY9052993.1"
                     /translation="MSPVLTQHVSQPITLDEQTQKMKRHLLQDIRRSAYVYRVDCGGC
                     NACEIEIFAAITPVFDAERFGIKVVSSPRHADILLFTGAVTRAMRMPALRAYESAPDH
                     KICVSYGACGVGGGIFHDLYSVWGGSDTIVPIDVWIPGCPPTPAATIHGFAVALGLLQ
                     QKIHAVDYRDPTGVTMQPLWPQIPPSQRIAIEREARRLAGYRQGREICDRLLRHLSDD
                     PTGNRVNTWLRDADDPRLNSIVQQLFRVLRGLHD"
     gene            9863..10276
                     /gene="hyfJ"
                     /locus_tag="JN001_001730"
     CDS             9863..10276
                     /gene="hyfJ"
                     /locus_tag="JN001_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416985.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 assembly chaperone HyfJ"
                     /protein_id="HAY9052994.1"
                     /translation="MTEECGEIVFWTLRKKFVASSDEMPEHRSQVMYYSLAIGHHVGV
                     IDCLNVAFRCPLTENEDWLAQVEEEQARRKMLGVMTFGEIVIDASHTALLTRAFALLA
                     DDATSVWQARSIQFIHLLDEIVQEPAIYLMARKIA"
     gene            10306..10650
                     /locus_tag="JN001_001731"
     CDS             10306..10650
                     /locus_tag="JN001_001731"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="formate hydrogenlyase"
                     /protein_id="HAY9052995.1"
                     /translation="MAMSDEAMFAPPQGITIEAVNGMLAERLAQKHGKASLLRAFIPM
                     PPPFSPVQLIELHVIKSNFYYRYHDDGSDVTATTEYQGEMVDYSRHAVLLGSSGMAEL
                     RFIRTHGSRFTP"
     gene            10729..12318
                     /locus_tag="JN001_001732"
                     /pseudo
     CDS             10729..12318
                     /locus_tag="JN001_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001499095.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent Fis family transcriptional
                     regulator"
     gene            12340..13184
                     /locus_tag="JN001_001733"
                     /pseudo
     CDS             12340..13184
                     /locus_tag="JN001_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311381.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter"
     gene            complement(13222..14283)
                     /locus_tag="JN001_001734"
     CDS             complement(13222..14283)
                     /locus_tag="JN001_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HAY9052996.1"
                     /translation="MLEMLMQWYRRRFSDPEAIALLVILVAGFGIIFFFSGLLAPLLV
                     AIVLAYLLEWPTERLQSIGCSRRWATSIVLVVFVGILLLMAFVVLPIAWQQGIYLIRD
                     MPGMLNKLSDFAATLPRRYPALMDAGIIDAMAENMRSRMLTMGDSVVKISLASLVGLL
                     TIAVYLVLVPLMVFFLLKDKEQMLNAVRRVLPRNRGLAGQVWKEMNQQITNYIRGKVL
                     EMIVVGIATWLGFLLFGLNYSLLLAVLVGFSVLIPYIGAFVVTIPVVGVALFQFGAGT
                     EFWSCFAVYLIIQALDGNLLVPVLFSEAVNLHPLVIILSVVIFGGLWGFWGVFFAIPL
                     ATLIKAVIHAWPDGQIAQE"
     gene            14496..15959
                     /gene="bepA"
                     /locus_tag="JN001_001735"
     CDS             14496..15959
                     /gene="bepA"
                     /locus_tag="JN001_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-barrel assembly-enhancing protease"
                     /protein_id="HAY9052997.1"
                     /translation="MFRQLKKNLVATLIAAMTIGQVAPAFADNADTLPDMGTSAGSTL
                     SIGQEMQMGDYYVRQLRGSAPLINDPLLTQYINSLGMRLVSHANSVKTPFHFFLINND
                     EINAFAFFGGNVVLHSALFRYSDNESQLASVMAHEISHLTQRHLARAMEDQQRSTPLT
                     WVGALGSILLAMASPQAGMAALTGTLAGTRQGMISFTQQNEQEADRIGIQVLQRSGFD
                     PQAMPTFLEKLLDQARYSSRPPEILLTHPLPESRLADARNRANQMRPMVVQSSEDFYL
                     AKARTLGMYNSGRNQLTSDLLDEWAKGNVRQQRAAQYGRALQAMEANKYDEARKTLQP
                     LLAAEPGNAWYLDLATDIDLGQNKANEAINRLKNARDLRTNPVLQLNLANAYLQGGQP
                     QEAANILNRYTFNNKDDSNGWDLLAQAEAALNNRDQELAARAEGYALAGRLDQAISLL
                     SSASSQVKLGSLQQARYDARIDQLRQLQERFKPYTKM"
     gene            15980..16339
                     /gene="arsC"
                     /locus_tag="JN001_001736"
     CDS             15980..16339
                     /gene="arsC"
                     /locus_tag="JN001_001736"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311384.1"
                     /note="This arsenate reductase requires both glutathione
                     and glutaredoxin to convert arsenate to arsenite, after
                     which the efflux transporter formed by ArsA and ArsB can
                     extrude the arsenite from the cell, providing resistance;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase (glutaredoxin)"
                     /protein_id="HAY9052998.1"
                     /translation="MTKQVKIYHNPRCSKSRETLNLLKENGVEPEVVLYLETPADAAT
                     LRDLLKMLGMNSARELMRQKEDLYKELNLADSSLSEEALIQAMVDNPKLMERPIVVAN
                     GKARIGRPPEQVLEIVG"
     gene            complement(16477..17223)
                     /gene="hda"
                     /locus_tag="JN001_001737"
     CDS             complement(16477..17223)
                     /gene="hda"
                     /locus_tag="JN001_001737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA inactivator Hda"
                     /protein_id="HAY9052999.1"
                     /translation="MVNFSRFCEILVEVSLNTPAQLSLPLYLPDDETFASFWPGDNSS
                     LLAALQNVLRQEHSGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVP
                     EVLDGMEHLSLVCIDNIECIAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQLNL
                     GLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRFLLKRLDREMRT
                     LFMTLDQLDRASITAQRKLTIPFVKEILKL"
     gene            complement(17273..18562)
                     /gene="uraA"
                     /locus_tag="JN001_001738"
     CDS             complement(17273..18562)
                     /gene="uraA"
                     /locus_tag="JN001_001738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HAY9053000.1"
                     /translation="MTRRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHINPA
                     TVLLFNGIGTLLYLFICKGKIPAYLGSSFAFISPVLLLLPLGYEVALGGFIMCGVLFC
                     LVSFIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTII
                     ISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTL
                     YTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVI
                     SGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVM
                     GGVSLLLYGVIGASGIRVLIESKVDYNKAQNLILTSVILIIGVSGAKVNIGAAELKGM
                     ALATIVGIGLSLIFKLISVLRPEEVVLDAEEADITDK"
     gene            complement(18648..19274)
                     /gene="upp"
                     /locus_tag="JN001_001739"
     CDS             complement(18648..19274)
                     /gene="upp"
                     /locus_tag="JN001_001739"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001295473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HAY9053001.1"
                     /translation="MKIVEVKHPLVKHKLGLMREQDISTKRFRELASEVGSLLTYEAT
                     ADLETEKVTIEGWNGPVEIDQIKGKKITVVPILRAGLGMMDGVLENVPSARISVVGMY
                     RNEETLEPVPYFQKLVSNIDERMALIVDPMLATGGSVIATIDLLKKAGCSSIKVLVLV
                     AAPEGIAALEKAHPDVELYTASIDQGLNEHGYIIPGLGDAGDKIFGTK"
     gene            19598..20635
                     /gene="purM"
                     /locus_tag="JN001_001740"
     CDS             19598..20635
                     /gene="purM"
                     /locus_tag="JN001_001740"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HAY9053002.1"
                     /translation="MTDKTSLSYKDAGVDIDAGNALVGRIKGVVKKTRRPEVMGGLGG
                     FGALCALPQKYREPVLVSGTDGVGTKLRLAMDLKRHDTIGIDLVAMCVNDLVVQGAEP
                     LFFLDYYATGKLDVDTASAVISGIAEGCLQSGCSLVGGETAEMPGMYHGEDYDVAGFC
                     VGVVEKSEIIDGSKVSDGDVLIALGSSGPHSNGYSLVRKILEVSGCDPQTTELDGKPL
                     ADHLLAPTRIYVKSVLELIEKVDVHAIAHLTGGGFWENIPRVLPDNTQAVIDESSWQW
                     PEVFNWLQTAGNVERHEMYRTFNCGVGMIIALPAPEVDKALALLNANGENAWKIGIIK
                     ASDSEQRVVIE"
     gene            20635..21273
                     /gene="purN"
                     /locus_tag="JN001_001741"
     CDS             20635..21273
                     /gene="purN"
                     /locus_tag="JN001_001741"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HAY9053003.1"
                     /translation="MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLE
                     RARQAGIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAG
                     RLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD
                     TEDDVTARVQTQEHAIYPLVISWFADGRLKIHENAAWLDGQRLPPQGYAADE"
     gene            21445..23511
                     /gene="ppk1"
                     /locus_tag="JN001_001742"
     CDS             21445..23511
                     /gene="ppk1"
                     /locus_tag="JN001_001742"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 1"
                     /protein_id="HAY9053004.1"
                     /translation="MGQEKLYIEKELSWLSFNERVLQEAADKSNPLIERMRFLGIYSN
                     NLDEFYKVRFAELKRRIIISEEQGSNSHSRHLLGKIQSRVLKADQEFDGLYNELLLEM
                     ARNQIFLINERQLSVNQQNWLRHYFKQYLRQHITPILINPDTDLVQFLKDDYTYLAVE
                     IIRGDTIRYALLEIPSDKVPRFVNLPPEAPRRRKPMILLDNILRYCLDDIFKGFFDYD
                     ALNAYSMKMTRDAEYDLVHEMEASLMELMSSSLKQRLTAEPVRFVYQRDMPNALVEVL
                     REKLTISRYDSIVPGGRYHNFKDFINFPNVGKANLVNKPLPRLRHIWFDKAQFRNGFD
                     AIRERDVLLYYPYHTFEHVLELLRQASFDPSVLAIKINIYRVAKDSRIIDSMIHAAHN
                     GKKVTVVVELQARFDEEANIHWAKRLTEAGVHVIFSAPGLKIHAKLFLISRKENGEVV
                     RYAHIGTGNFNEKTARLYTDYSLLTADARITNEVRRVFNFIENPYRPVTFDYLMVSPQ
                     NSRRLLYEMVDREIANAQQGLPSGITLKLNNLVDKGLVDRLYAASSSGVPVNLLVRGM
                     CSLIPNPEGISDNIRAISIVDRYLEHDRVYIFENGGDKKVYLSSADWMTRNIDYRIEV
                     ATPLLDPHLKQRVLDIIDILFSDTVKARYIDKELSNRYVPRGNRRKVRAQLAIYDYIK
                     SLEQPE"
     gene            23516..25057
                     /gene="ppx"
                     /locus_tag="JN001_001743"
     CDS             23516..25057
                     /gene="ppx"
                     /locus_tag="JN001_001743"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HAY9053005.1"
                     /translation="MPIHDKSPRPQEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQR
                     VHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTHTLRQALNATDFL
                     KRVEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPI
                     LVESRRMGCVSFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASG
                     TIKAAHEVLMEMGEKDGIITPERLEKLVKEVLRHRNFASLSLPGLSEERKTVFVPGLA
                     ILCGVFDALAIRELRLSDGALREGVLYEMEGRFRHQDVRSRTASSLANQYHIDSEQAR
                     RVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNS
                     DLPGFNQEQQLMMATLVRYHRKAIKLDDLPRFTLFKKKQFLPLIQLLRLGVLLNNQRQ
                     ATTTPPTLTLITDDSHWTLRFPHDWFSQNALVLLDLEKEQEYWEGVAGWRLKIEEEST
                     PEIAA"
BASE COUNT         5716 a         6576 c         6684 g         6142 t
ORIGIN      
        1 caactcaacg aaagcctctg tattggctgc aagctttgcg ccgtggtctg cccatttggc
       61 gcaatcagcg cttcaggaag ccgtccggtg aatgcccctg cgcaatatgt ttttcaggct
      121 gacggctcac tcaaagatgg cgaagaaaac gcgccgaccc aacatgcttt gctgcgctgg
      181 gaaccgggtg tccagaccgt cgcggtgaaa tgcgacctgt gtaatttctt gccagaaggt
      241 ccggcctgcg ttcgcgcttg cccgaatcag gcgttacggc tgattaccga cgatagcctg
      301 caacgtcaga tgaaagaaaa acagcgcctt gccgcaagct ggtttgccaa tggcggggag
      361 gatccccttt ccctcactca ggagcaacac taatggatgc cctgcaatta ttaacctggt
      421 cgctgatcct ctttctgttt gccagtctgg cttcgctgtt tttactcggt ctggacagac
      481 tggctattaa gctttccggc atcacatcgc tggtgggcgg cgtgattggc atcatcagcg
      541 gaattacgca attacatgct ggtgtaactt tagtcgcccg ttttgccacc ccttttgact
      601 ttgccgattt aaccctgcga atggatagcc tctcggtatt tatggtgctg gttatctcct
      661 tgctggtggt ggtttgttcg ctctattcat tgacttatat gcgcgaatac gagggcaaag
      721 gcgcggcggc gatgggcttc tttatgaatc ttttcatcgc atcgatggtt gccctgctgg
      781 tgatggacaa cgctttttgg ttcatcgtgc tgtttgaaat gatgtcgctg tcttcctggt
      841 ttctggtcat tgccaggcag gataaaacgt cgatcaacgc tggcatgctc tactttttta
      901 tcgcccacgc cggatcggtg ctgattatga tcgccttctt gctgatgggg cgcgaaagcg
      961 gcagcctcga ttttgccagt ttcgcacgct ttcactttct ccggggctgg cgtcggcgat
     1021 gtttctgctg gcctttttcg gttttggcgc gaaagccggg atgatgccgt tgcacagctg
     1081 gttgccgcgc gctcaccctg ccgcaccatc gcacgcttcg gcgttgatgt ctggcgtaat
     1141 ggtcaaaatc ggtattttcg gcatcctgaa agtagcgatg gatctgctgg cgcaaacggg
     1201 tttgcctctg tggtggggca ttctggtgat ggcgatcggc gcaatctccg cgctcctggg
     1261 cgtgctatat gcgctggcgg aacaggatat caaacggctg ctggcctgga gtaccgtcga
     1321 aaacgtcggc attattttgc tggcagtcgg tgtggcgatg gacggtctgt cactgcacga
     1381 cccgctgctc accgtggttg gactgctcgg cgcactgttt catctgctca accatgcgct
     1441 gttcaaaggg ctgctatttc tcggcgcggg cgcgattatt tcgcgtttgc atacccacga
     1501 catggaaaaa atgggggcac tggcgaaacg gatgccgtgg acagccgcag catgcctgat
     1561 tggttgcctc gcgatatcag ccattcctcc gctgaatggt tttatcagcg aatggtacac
     1621 ctggcagtcg ctgttctcac taagtcgtgt ggaagccgta gcgctacaac ttgcgggtcc
     1681 tattgctatg gtaatgctgg cagtcactgg tgggctggca gtaatgtgct tcgtcaaaat
     1741 gtacggtatt actttctgtg gtgcgccgcg cagtacacac gctgaagagg cacaggaagt
     1801 gccaaatacg atgatcgtcg ccatgctact gctcgcggca ctctgcgtat taattgcgct
     1861 tagtgccagt tggctggcac cgaagataat gcatattgcc catgcgttta ccaatacccc
     1921 tcccgtcact gtcgccagcg gaatagcact tgtacccggc acgtttcata cacgggtcac
     1981 tccttcatta ctgttgctgt tactactggc gatgcctttg ctgcctggcc tttactggct
     2041 gtggtgtcgt tcgcgccgcg cagcgtttcg tcgcacagga gatgcctggg catgcggcta
     2101 cggctgggaa aacgcgatgg ctccgtcagg caatggcgtg atgcagccgc tgcgtgtggt
     2161 cttctctgcg ttatttcgtc tacgacaaca gctcgaccct acgctgaggc taaataaaga
     2221 tcttgcgcac gtcaccgcca gggctcagag cacagaaccc ttctgggatg agcgggtgat
     2281 ccgccccatc gtgagcgcca cccaacggct ggccaaagaa atacagcatc tgcaaagcgg
     2341 cgactttcgt ctctattgcc tgtatctagt tgccgcactg gttgtgctgc taatcgctat
     2401 tgccgtctaa ggaaatcacc atgagacaaa ctctttgcga cggatatctg gtcatttttg
     2461 cgttagcaca ggccgtgatt ctgctgctgc taaccccgct ttttacgggt atttcccggc
     2521 agatacgcgc gcgtatgcac tcccgccgcg ggccggggat ctggcaggat tatcgcgaga
     2581 tccacaaact gtttaaacgc caggaagttg cgcctatatc ttcaggtctg atgttccgcc
     2641 tgatgccgtg ggtattaatc agcagcatgc tggtgctggc gatggcccta ccacttttta
     2701 ttaccgtttc cccttttgcg ggcggcggcg atctgatcac ccttatctat cttcttgccc
     2761 tgtttcgttt tttctttgct ctttccggac tggataccgg aagcccgttt gcgggagtcg
     2821 gtgccagtcg cgagttgacg ctcggcattc tggtcgaacc catgctcatt ctctcactgc
     2881 tggtattggc gctgatagca ggttccacgc atatcgagat gatcagcaat acgctggcaa
     2941 cgggctggaa ctcgccgcta accaccgtac tggcgttact ggcctgtggt tttgcctgct
     3001 tcattgagat gggaaaaatt ccctttgatg ttgctgaagc agaacaggaa ttacaggaag
     3061 gcccgctgac cgaatattcc ggtgccgggc tggcgctagc gaaatggggg ctggggctga
     3121 aacaggtcgt gatggcagca ctgtttgtgg ccctgtttct gccctttggg cgcgcgcaag
     3181 aactttctct cgcctgcctg ctgacttcac ttgtcgttac gctgctcaag gttttgctga
     3241 tttttgtact ggcctcaatc gcagaaaaca cgctggcacg cgggcgtttt ttactcattc
     3301 accatgtgac ctggcttggc ttcagccttg ctgcgcttgc atgggtcttc tggttaaccg
     3361 gtctgtaagg agcactgacg gaatatggaa aatcttgctc tgacgacgtt aatgctgcct
     3421 tttatcggcg cactggtcgt ttcgttttcg ccacaacgtc gggccgccga atgggggttt
     3481 tgttcgccgc actgaccacg ctgtgcatgt tgtcgctgat ctccgcgttt tatcaggccg
     3541 ataaagttgc cgtcacgttg acgttggtca acgtggggga tgtggcattg tttggcctgg
     3601 tcattgatcg cgtgagtacg ctgattctgt ttgtggtggt gtttctcggt ttgctggtca
     3661 cgatctactc cacgggttat ctgacggata aaaatcgcga acacccgcat aacggcacga
     3721 atcgttatta cgcatttttg ctggtgttta tcggcgcgat ggcgggactg gtactctcct
     3781 cgacgctgct cggtcagttg ttgttttttg aaattagggc ggctgctcct gggcgttgat
     3841 cagttattac cagagcgata aagcgcagcg ttcaacacta aaagcgttgc ttatcaccca
     3901 tatcggttcg ttggggttgt atcttgccgc cgccacgctg tttttgcaga ccggaacgtt
     3961 tgtgcttagc gcgatgagcg agttacatgg cgacgcacgt tatctggttt atggcggcat
     4021 cctgtttgcc gcgtggggga aatcggccca gctaccgatg caagcgtggc taccggacgc
     4081 aatggaagcg ccaacaccga tcagagccta tctccacgcc gcatcgatgg tgaaagtggg
     4141 cggctggcac tggagggcag catcgcctac atcgtcaacc acgcgttcgc taaaagcctg
     4201 tttttccttg tagcaggtgc gctgagttac agctgcggca cgcgcttgtt gccgcgtctg
     4261 cgtggcgtat tgcactccct gccgttgcca ggcgtgggtt tctgcgtggc agcgctggcg
     4321 attaccggtg tgccgccgtt caacggcttc ttcagtaaat tcccgctgtt tgccgccggt
     4381 tttgcgttgt cagtggagta ctggatcctg ctgcccgcca tgattctgct gatgattgaa
     4441 tcggtcgcca gtttcgcctg gtttattcgc tggtttggtc gcgttgtgcc tggcaaaccg
     4501 agcgaggccg tcgccgatgc cgcaccgctg ccagggtcaa tgcgcctggt gttgattgta
     4561 ctgattgtga tgtcgctgat ttccagcgta atcgccgcga cctggttgca gtaaggagat
     4621 gatgaatgat cggttctatg atcgtaaata atctggcggg actgatgatg ctgacatcgc
     4681 tgtttgtgat tagcgtcaaa agctatcgcc tgtcatgcgg attttacgcc tgccagtcgc
     4741 tggtgctggt gtctattttc gccactctct cgtgcctgtt cgccgcagag caactgctga
     4801 tctggtccgc cagcgccttt atcaccaaag tgctgctggt accgttaatc atgacttacg
     4861 ctgcacgaaa tattccccag aacatcccgg aaaaagcgtt attcggtccg gcaatgatgg
     4921 cactgctcgc ggcgttaatt gtcctgcttt gcgcatttgt cgttcagccc gtgaagctac
     4981 cgatggctac cgggctgaaa ccggcgctgg cggtagcgtt aggtcatttt ctgcttggcc
     5041 tgctgtgcat tgtcagccag cgcaatatcc tgcggcaaat ttttggttac tgcctgatgg
     5101 aaaacggctc ccatctggtg ctggcgcttc ttgcctggcg agcaccggaa ctggtggaaa
     5161 taggtatcgc taccgacgcc atcttcgccg tcattgtgat ggtgttactg gcaagaaaaa
     5221 tatggcgtac ccacggcacg ctggacgtga acaacttgac cgcgctgaag ggataatgag
     5281 atgagttatt ctgtgatgtt cgctttactc ctgctcacgc cgctgctttt ttcgctgctc
     5341 tgttttgcct gccggaaacg ggggctctct gcgacttgta cggtgactgt attacatagc
     5401 ttagggatca cactgctgct gattctggca ctctgggtgg tccaaactgc cgctgatgca
     5461 ggagaaatat tcgctgcggg actgtggctt catattgatg gtctgggcgg tttgttcctc
     5521 gccattcttg gtgtgattgg ctttctcacc ggtgtttact cgattggcta catgcgtcat
     5581 gaagtggcac acggcgagct ttcacccgtt acactgtgcg attactacgg tttcttccat
     5641 ctgtttttgt tcaccatgct gctggttgtt accagcaata acctgattgt gatgtgggcg
     5701 gcgatcgaag ccaccacctt aagctcggcg tttctggtag gcatttacgg tcagcgttca
     5761 tcgctggaat cagcatggaa gtacatcatt atttgtactg ttgatgtcgc ttttggtctg
     5821 ttcggtaccg tgctggtata cgccaacgcc gccagcgtta tgccgcaggc agaaatggcg
     5881 atattctgga gcgaggttct taagcaatcg tccttgcttg acccaacatt aatgctgttg
     5941 gcctttgtgt ttgtgctaat tggctttggt accaaaaccg ggctatttcc catgcacgcc
     6001 tggctgccgg atgctcacag tgaagcgccg agtccggtca gcgccctgct ctccgccgta
     6061 ttgctgaact gcgcgctgtt ggtgctgatt cgctattaca tcattatttg ccaagccatc
     6121 ggcagcgatt tccccaaccg gttgttgctc atcttcggca tgttgtcggt tgccgtggcg
     6181 gcatttttca ttctggtaca gcgggacatt aagcgtctgc tggcgtactc cagcgtggag
     6241 aacatggggc tggtcgcggt ggcgctaggc attggcgggc cgctgggaat ttttgccgcg
     6301 ctgctgcaca ccttaaacca cagtctggca aaaacgctgc tgttctgcgg ttccggcaat
     6361 gtactgctca agtacggcac gcgcgatctc aacgtcgtct gtgggatgct caaaatcatg
     6421 ccatttaccg ccgtgctgtt tggcggcggt gcgctggcgc tggcagggat gccgcccttc
     6481 aacatttttc ttagcgaatt tatgaccgtt accgcaggac tggcacgtaa tcacctgctg
     6541 attatcgtcc tgctgttatt gctgttaacg ctggtgctgg cgggcctggt acggatggct
     6601 gcgcgggtgt taatggcgaa accgccgcag gccgttaacc ggggtgatct cggctggttg
     6661 accacctcgc caatggtgat tctgctggtc atgatgctgg cgatgggaac gcatattcca
     6721 caacctgtca tcaggatcct ggcgggcgct tccactatag tcctctcagg gacgcacgac
     6781 ctgcctgcac aacgtagcac ctggcatgat tttttgcctt caggcaccgc atctgtttcg
     6841 gagaaacaca gtgaacgtta attcatcgtc aaatagtggc gaagcgattc tcgccgccct
     6901 gaaaacgcag ttccccggcg cggtactgga tgaagagcga caaacgcctg aacaggtcac
     6961 cattacggtg aaaatcaatc tgctgcctga cgttgtacat tatctttatt atcaacatga
     7021 tggctggctt ccagtcctgt ttggcaacga cgagcggaca cttaacggtc attacgcggt
     7081 ttattatgcc ctttcaatgg aaggggccga aaaatgctgg atcgtggtga aggcactggt
     7141 cgatgccgac agtcgggagt ttccgtcagt cacaccgcgc gtccctgccg cggtctgggg
     7201 cgagcgagaa attcgcgata tgtacgggct gattccggtt ggcctgccgg atcagcgtcg
     7261 cctggtgttg cccgatgact ggccggaaga tatgcatccg ctgcacaaag atgcgatgga
     7321 ttatcgactg cgccctgaac cgacgacaga ttccgaaacg tatgcgttta tcaatgaggg
     7381 caacagcgat gcgcgggtga tccctgtcgg cccgctgcat atcacctccg atgaaccggg
     7441 tcacttccgc ttgtttgtgg atggcgagca aattgtcgat gctgattacc gcctgtttta
     7501 tgtccatcga ggcatggaga aactggcaga aacgcggatg ggctacaacg aagtgacctt
     7561 cttatcggac cgcgtgtgtg ggatttgcgg ttttgcccac agtgtggcct ataccaactc
     7621 ggttgaaaat gcactgggga ttgaggtgcc gcaacgagcg cataccattc gctcgattct
     7681 gctggaagtc gaacggctac acagtcattt gctcaacctt ggcctctcct gccattttgt
     7741 tggttttgat accggcttta tgcaattttt ccgcgtgcgg gaaaagtcga tgacgatggc
     7801 ggaattgctg accgggtcgc gtaaaaccta cggtctgaat ctgattggtg gtgttcgccg
     7861 cgatattctc aaagagcaac gtctgcaaac gctgaaactg gtgcgcgaga tgcgcgccga
     7921 cgtgtcggag ctggtagaga tgctgcttgc tacgccgaat atggaacaac gcactcaggg
     7981 cattggcatt ctcgaccgac aaatcgcccg tgattatagc cctgtagggc cgctgatccg
     8041 cggcagtggt tttgcccgtg atttgcgctt tgatcacccc tacgccgact acggcaatat
     8101 tccaaaaaca ctgtttacct tcaccggcgg cgatgttttc tcccgcgtga tggtccgtgt
     8161 caaagagacg tttgattcgc tggcaatgct ggaatttgcc ctcgacaaca tgccggatac
     8221 cccactgctg accgaaggct ttagctataa acctcacgca ttcgcgctgg gctttgttga
     8281 agcgccacgc ggtgaagacg tgcactggag catgctcggt gataaccaaa aattgttccg
     8341 ctggcgctgc cgtgccgcca cctacgccaa ctggccggtg ttgcgttaca tgctgcgcgg
     8401 caataccgtt tctgacgcac cgctgattat cggtagcctt gatccctgct actcctgtac
     8461 cgaccgtgtg acgctggtag atgtgcgcaa gcgccagtca aaaaccgtgc cgtataaaga
     8521 gatcgaacgc tacggcattg atcgtaaccg ttcgccgctg aagtaaggac agaagatgct
     8581 gaagttactg aaaactatta tgcgcgccgg aaccgcgacg gtgaaatatc ccttcgcgcc
     8641 actggaggtc agcccaggct ttcgcgggaa accggacctg atgcccagcc aatgtattgc
     8701 ctgcggcgcc tgtgcttgtc cggcaaatgc gctgactatc cagaccgacg accagcaaaa
     8761 ttcgcgcacc tggcagctct atctggggcg ttgtatttac tgcggacgtt gtgaagaagt
     8821 gtgcccgacc agagccatcc agcttaccaa taactttgaa ctgaccgtca ccaataaagc
     8881 cgatctctat acccgcgcga cgttccatct acaacgttgc agccgttgcg aacgcccgtt
     8941 tgccccgcaa aaaaccgtcg cactggctgc tgaattgttg gcacagcaac aaaatgcgcc
     9001 acaaaaccgc gaaatgttgc gggcgcaagc gagcgtctgc ccggagtgca aacaacgcgc
     9061 gacgctgatc aacgacgata cagatgtacc gctggtggct aaggagcagc tatgagtcca
     9121 gtgcttacac aacatgtcag ccagcccatc acgctggatg agcaaacgca aaagatgaag
     9181 cggcatttgc tacaggatat ccgtcgctca gcctacgttt atcgcgtcga ttgcggcggc
     9241 tgcaacgcct gtgaaatcga aatttttgct gccatcaccc ccgtattcga cgcagaacgt
     9301 tttggcatta aggttgtttc atcaccgcgt cacgccgata ttttgttatt tactggcgca
     9361 gtcacccggg cgatgcgtat gcctgcactt cgggcgtatg agtctgcccc cgatcataaa
     9421 atctgtgttt cctacggcgc gtgcggtgtc ggcggcggta ttttccacga tctctacagc
     9481 gtctggggcg gcagcgacac cattgtcccc attgatgttt ggatccccgg ctgcccgcca
     9541 acaccggccg ccaccattca cggtttcgcc gtggcgctcg gtttgctgca acagaagatt
     9601 cacgctgtgg attatcgcga tcccaccggg gtgactatgc aaccgttgtg gccacagatc
     9661 ccgccatcac agcgtatcgc cattgagcga gaagcgcggc ggctggcggg ctatcgtcag
     9721 gggcgagaaa tttgcgatcg gctcctgcgc catttaagcg acgatcctac aggaaatcgg
     9781 gttaacacct ggttgcgcga tgccgacgat ccacgtctca atagtatcgt tcagcaactc
     9841 tttcgcgtac tccgggggtt acatgactga agagtgcggg gaaattgttt tctggacgct
     9901 gcgaaaaaag tttgtcgcca gtagcgacga gatgccggaa caccgctctc aggtaatgta
     9961 ttactcgctg gctatcggcc atcacgttgg cgtgattgat tgtctgaatg tcgccttccg
    10021 ctgcccactg acggaaaacg aagattggct tgcacaggtc gaagaggagc aagcccgacg
    10081 taagatgctg ggggtgatga cctttggtga gattgttatt gacgccagcc acaccgccct
    10141 gttgacccgg gcattcgcgc tactggcaga tgacgcgacg tctgtgtggc aggcgcgtag
    10201 cattcaattc attcatctgt tggatgaaat tgtgcaggaa ccggccatct atctgatggc
    10261 cagaaaaatt gcgtgagaag gatttctcat taataaggac tgttgatggc tatgtcagac
    10321 gaggcgatgt ttgccccgcc acaaggaata acaattgaag cggtaaacgg aatgctcgcg
    10381 gagcggttag cacagaaaca cggtaaggcg tctttattac gcgccttcat cccgatgccg
    10441 ccgccgttca gcccggtaca acttattgaa ctgcatgtta tcaaaagcaa cttctattac
    10501 cgctaccatg atgatggcag cgatgtgacg gcaacaacag agtatcaggg cgagatggtc
    10561 gattattcgc gtcacgccgt ccttctcggc agtagtggaa tggcggagct acgctttatt
    10621 cgtacccacg gcagccgttt tactccctag gattgcacac tgtttaactg gctggcacgc
    10681 attatcactc cggttctgca atcatggctc aatgatgaag aacaacaggt ggcgctgcgt
    10741 ttgctggaga aagatcgcga tcatcatcgg gtactggttg atattactaa tgcagtgctg
    10801 tcacatcttg atctcgacga tctgatcgct gacgtcgctc gtgagatcca tcattttttc
    10861 ggtctggctt cagtcagtat ggtactgggc gatcatcgaa agaacgagaa gtttagcctg
    10921 tggtgcagcg atctttctgc ctcacattgt gcgtgtctgc cacgcaatat gcctggcgac
    10981 agtgtattgc tgacacaaac gctacaaacc cgacaaccga ccttgacgca ccgtgcagac
    11041 gatctgtttc tctggcaacg cgacccgtta ttactcttac ttgcatctaa cggctgcgaa
    11101 tctgcgctcc ttataccgct tacctttggc aaccatacac cgggtgcatt gttgctggcg
    11161 catacctctt ccactctctt tagtgaggaa aactgccagc tactacaaca catagccgat
    11221 cgcatcgcta ttgccgttgg caatgccgat gcctggcgta gcatgaccga tttgcaggaa
    11281 agtttgcagc aagaaaacta ccagcttagc gagcagctcc tttcgaatct gggcatcggt
    11341 gacattatct atcaaagcta ggcaatggaa gacctgctcc agcaggtaga tattgtagcg
    11401 aagagcgaca gtacggtgtt gatttgtggt gaaaccggaa ccggcaaaga ggtgatcgcc
    11461 agagcgctcc atcaacttag cacgcgacgc gacaaaccgc tggtcaaaat caactgcgct
    11521 gccatccccg ccagtcttct ggaaagtgag ttattcggtc atgacaaagg ggcgtttact
    11581 ggtgcgatta atacacatcg tggtcgtttt gaaattgccg atggcggcac gttgtttctc
    11641 gatgaaattg gcgatctgcc gttagaactt cagcctaaac tgctgcgcgt attgcaggaa
    11701 cgggagattg agcgtctcgg cgggagtaga acgatcccgg tgaatgtcag agtcattgcc
    11761 gccaccaacc gtgatttgtg gcaaatggtt gaagatcgcc agtttcgcag caatctcttt
    11821 tatcgcctga atgtcttccc attggaattg ccgccgctac gcgaccgtcc ggaagatatc
    11881 cctcttttag caaaacattt cacgcaaaaa atggcgcgcc atatgaatcg cgcaattgac
    11941 gccatcccga ccgaggcgct acgccagttg atgtcgtggg actggccggg caacgtgcac
    12001 gagctggaaa acgtgattga gcgagcggta ctgctgactc gcggtaacag tctgaattta
    12061 catcttaatg tccgacaaag ccgtttactg ccgacgctaa atgaagattc agcgcttcgc
    12121 agttcaatgg cgcagttgct gcacccgacg acgccagaga atgacgaaga agaacgtcag
    12181 cgcattgttc aggtattgcg agaaaccaat ggcattgttg ccgggccccg tggcgcggcg
    12241 acacgattag ggatgaagcg caccacgctg ctgtcacgaa tgcagcgtct ggggatctcg
    12301 gttcgcgagg tgttgtaatc tgcttttgca ggagtatgca tgagaaacaa actctctttc
    12361 gacttgcagt tgagcgccag aaaagcggca atcgctgaac ggattgccgt ccataaaatt
    12421 gcccgcagta aagtgtcggt ctttttaatg gcgatgtccg ctggcgtgtt tatggcgatc
    12481 ggatttactt tttacctttc cgttatcgcc gatgccccgt cttcacaggc attaacccat
    12541 ctggtgggcg gcctttgctt tacactcggc tttattttgc tggcggtttg cggcacagcc
    12601 tgttcacctc gtcggtaatg acggtgatag caaaaagtcg gggcgttatt agttggcgaa
    12661 cttggctgat taacgcactt ctggtggcct gtggtaatct ggcaggtatt gcctgtttca
    12721 gtttgttaat ctggttttcc gggctggtga tgagtgaaaa cgcgatgtgg ggagtcgcgg
    12781 ttttacactg cgccgagggc aaaatgcatc atacatttac tgaatctgtc agcctcggca
    12841 ttatgtgcaa tctgatggtt tgcctggcgc tgtggatgag ttattgcggg cgttcgttat
    12901 gcgacaaaat cgtcgccatg attttgccca tcaccctgtt tgtcgccagt ggctttgagc
    12961 actgtatcgc caatttgttt gtgattccgt tcgccattgc cattcgccat ttcgcccccc
    13021 ccttctggca actggcgcac agtagcgcag acaattttcc ggcactgacg gtcagccatt
    13081 ttattaccgc caatctgctc ccggtgatgc tgggtaatat tatcggcggt gcagtgctgg
    13141 tgagtatgtg ttatcgggct atttatttac gtcaggaatc ctgaaaaatc agcccggcga
    13201 aacagttcgt cgggctgaag attattcttg cgcgatttgc ccatcgggcc aggcgtggat
    13261 cacggctttg atcagcgtcg ccaatggaat ggcgaagaat acgccccaga atccccacaa
    13321 accaccgaag atcaccaccg ataaaataat caccagcgga tgcaggttaa ccgcttcgga
    13381 gaacaacacc ggtactagca ggttgccgtc cagcgcctga ataatcagat acaccgcgaa
    13441 gcagctccag aattccgtgc ctgcgccaaa ctggaatagc gccacgccaa ccaccggaat
    13501 ggtcaccaca aatgcgccaa tgtacggaat aagaaccgag aagccgacca gcaccgccag
    13561 cagcagcgaa tagttcagcc caaagagcaa gaaccccagc caggtggcga tccccaccac
    13621 gatcatctcc agcactttgc cgcggatata gttggtgatt tgttgattca tctccttcca
    13681 cacctgtcct gccagtccac ggttgcgcgg cagcacccga cgaacggcgt tcagcatctg
    13741 ctctttgtct ttcagcagga agaagaccat caatggcacc agcaccagat agacggcaat
    13801 ggtcagcaaa ccgaccagcg aggcgaggga aattttcacc accgaatcgc ccatggtcag
    13861 catccgactg cgcatatttt cggccattgc atcaataatg cccgcgtcca ttaacgccgg
    13921 atagcggcgc ggcaacgtgg cggcaaagtc agaaagctta ttgagcatcc ccggcatatc
    13981 gcggattaag tagatgccct gttgccaggc gataggcagt accacgaacg ccatcagtag
    14041 caatataccg acaaaaacca ccaatacaat cgacgtcgcc cagcggcggg agcagccaat
    14101 agattgcagg cgctcggttg gccattccag caaataggcc agcacaatag ccaccagcaa
    14161 cggagcaagc aggccactaa agaaaaagat aatgccaaat ccggcaacta aaataaccag
    14221 caaggcaatc gcttccgggt cgctaaaacg gcggcgatac cattgcatca acatttcgag
    14281 cataaaaacc ttccctgaac ctcaagagcg ggattgcgat ccgcaattgt atcgaaatgt
    14341 cacaaaaaag acttcgcttt ttatgacgga ttcaggaaac tgaaaagtca tttgagtggg
    14401 ctaatcttcg ccgttacact caaaggcggc gcggtgggaa cgatatttca cagtatcggt
    14461 caaatgacta tcttcagaaa tacaggatag aggttatgtt caggcagttg aaaaaaaacc
    14521 tggttgcaac cctcattgct gctatgacca ttggtcaggt agccccggcg tttgccgaca
    14581 acgcagacac cttgccggat atgggaacct ccgcaggaag cacgctttcc attggtcagg
    14641 aaatgcagat gggcgactat tatgtccgcc agctacgcgg cagcgcgccg ttaattaatg
    14701 acccgctgtt aacgcaatat attaattcgc tggggatgcg tctggtttcg catgccaatt
    14761 cggttaagac accgtttcat ttttttctaa tcaacaacga cgaaattaac gcctttgctt
    14821 tctttggcgg caacgtggtg ctgcactctg ccctgttccg ttattccgat aacgaaagtc
    14881 aactggcttc agttatggcg cacgaaatct cccacctcac ccaacgtcac ctggcgcgag
    14941 cgatggaaga tcagcagcgc agcacgccgc tgacctgggt cggcgcgtta ggttctattt
    15001 tactggcgat ggccagtccg caggcgggga tggcggcgct gaccggtaca ctggcgggaa
    15061 cgcgtcaggg gatgatcagt ttcacccagc aaaatgaaca ggaagcggac cgcattggta
    15121 ttcaggtgct gcaacgctcg ggattcgatc cgcaggcgat gccaaccttc ctcgaaaaat
    15181 tactcgatca ggcgcgttac tcctcgcgcc cgccggaaat tttattgact cacccgttgc
    15241 cggaaagtcg tctggcagat gcccgcaacc gtgctaatca gatgcgaccg atggtggtgc
    15301 agtcgtcgga agatttctat ctggcgaaag cgcgcacact ggggatgtat aattccggac
    15361 gtaaccagct caccagtgat ttgctggatg aatgggcgaa aggaaacgtt cgtcagcaac
    15421 gagcggcgca atatggtcgt gctttacagg cgatggaagc caataaatac gacgaggcgc
    15481 gtaaaacgct gcaaccgtta ctggcggcag aacctggcaa cgcatggtat ctcgatctgg
    15541 ctaccgatat cgatcttggg caaaacaaag ccaatgaggc aatcaatcgc ctgaaaaatg
    15601 cccgtgattt gcgcaccaat ccggtgttgc agctcaacct ggcaaacgct tatctgcaag
    15661 gcggtcaacc acaagaagcg gccaatattc tcaatcgcta cacctttaat aataaagatg
    15721 acagcaacgg ctgggattta ctggcacagg cggaagccgc gctaaataac cgcgatcagg
    15781 agctggctgc gcgagcagaa ggttatgcgc tcgccggacg actcgatcag gccatttcgc
    15841 tgttgagtag cgccagttcg caggtgaaat taggcagcct gcaacaagcg cgttacgatg
    15901 cgcgcatcga ccagttgcgc cagctgcagg aacgctttaa gccttatacc aagatgtaat
    15961 tcgcattaaa ggaagaacaa tgaccaaaca ggtaaaaatc taccataacc cacgctgttc
    16021 aaagagccgg gaaacgctga acctgctgaa agaaaacggc gtggagccag aagtggtact
    16081 ctaccttgag acacccgccg atgcggcaac gctgcgcgat ttgctgaaaa tgctggggat
    16141 gaatagcgcc cgtgaattga tgcgccagaa agaggatctt tataaagaac tgaacctggc
    16201 tgacagttcg cttagcgaag aggcgctgat tcaggcaatg gtggataatc cgaagctgat
    16261 ggagcgcccg attgtggtcg cgaatggcaa agcgcggatt ggtcgtccac cggagcaggt
    16321 actggaaatc gtgggttaag atgtgctcca tcgctagttg aagcacattg ccggatgcga
    16381 cgcttgccat gtcttatccg gcctacgaat actatggatt aacttcgcgt agttcggata
    16441 aggcgttcgc gccgcatccg acaataaaca ccttatctac aacttcagaa tttctttcac
    16501 aaacggaatg gtcagcttac gttgcgcggt aatcgacgca cgatccaact gatccaacgt
    16561 cataaatagc gtgcgcattt ctctgtcgag ccgcttcagc aagaaacgcc ccacatcttc
    16621 cggcagttca aaaccacgca aacgcgcgcg taactgtagc gcctgcaact tatcttcatc
    16681 agaaagtggc tgcaatttgt agatctgccc ccagtcgagt cgcgacgcga gatccggtaa
    16741 tcccagattc aactgccgcg gtggacgatc gccggtgatc aacaaccgtg ttttgcccga
    16801 ttccagaatt cgattgtaga gatcgaaaat cgccatctcc cacaactcat cgcctgcaat
    16861 acactcaatg ttgtcgatac aaaccagcga caaatgctcc ataccgtcga gcacttccgg
    16921 aacaaaccaa gtgcgtttat ccagcgggac atagcccacc gcatcgccac gctgcgacaa
    16981 ttccgcgcaa gccgcgtgca gcagatggct gcgccccgcg ccttcgcgtg cccagagata
    17041 gatgtaaccg ctatgttcct gacgcagcac gttttgcagc gcggccagta aagaggagtt
    17101 atcccccggc cagaaacttg caaaggtttc gtcgtcagga agataaagtg gcaaagagag
    17161 ctgtgccggt gtgttcagag atacctcaac caggatttca caaaatcgcg agaagtttac
    17221 cacagaatcc catgatgttt gaaccgggca gcaacactgc ccggtcggta cattatttgt
    17281 ctgttatatc cgcctcttct gcgtccagca ccacttcttc agggcgcagc acactgatca
    17341 gtttgaaaat caaacttaag ccgataccga cgatggtcgc cagcgccata ccttttaact
    17401 ccgccgcgcc gatgtttacc ttcgcgccac tgacgccgat gatcaaaatc acggaagtca
    17461 ggatcaggtt ctgtgctttg ttgtaatcca ctttcgattc gatcaaaaca cgaataccgg
    17521 aagcaccgat gacaccataa agcagcagcg aaacgccgcc catcaccggc aatgggatca
    17581 tctggatagc ggcagccagt ttaccgacgc aggaaagcag gatagcgaaa atcgccgccc
    17641 cgccgataac ccaggtactg taaacacggg tgatcgccat cacgccaatg ttttctccgt
    17701 aagtggtatt tggcgtggag ccaaagaagc cggagatcac ggtcgacagg ccgttagcaa
    17761 acatcgaacg gtgcagacct ggatcgcgca gcagatcttt tttgacgata ttagccgtta
    17821 ctaccaggtg ccctacgtgt tcggcaataa ccactaacgc cgctggcaga atagtcagaa
    17881 tggcaaacca ctcgaagcgc ggcgtataga gggttggcag cgcaaaccag tgagcattaa
    17941 taatcggcgt ggtatcgaca attcccattg cgaaagagag cgcgtagccc accagcacgc
    18001 caattaaaat cgggataatt gccaggaaac cacgaaacag cacggaacct aaaaccgtga
    18061 ccgccagggt ggtaatagag atgatgatgg ttttggagtc tggcgtttgc ccttcagccg
    18121 ggagtaaacc cgccataccg gcagctacgc ccgccagctc cagaccgatg acggcaacga
    18181 ttgcgcccat tgccgcaggt ggaaacagca cgtccagcca gccggtcccc gctttcttca
    18241 cgataaaaga aaccaggcag aacagcacgc cgcacataat aaagccgccc agcgcgactt
    18301 cataccctaa cggcaacagt aacaataccg gtgaaataaa ggcaaagctg gaaccaagat
    18361 aagccggaat tttcccttta cagatgaaga gatacagcag cgttccaata ccgttaaata
    18421 acagtacagt cgccgggtta atatgaaata agacgggcac caggacggtt gcaccaaaca
    18481 tggcgaacaa atgttgcaaa ctaagcggga ttgtctgtaa aagtggcggt ctttcactca
    18541 ccccgatagc acggcgcgtc atagtattat cctctgtatt atgtgttata ggcgctttac
    18601 tcaaaaaaaa gccgactctt aaagtcggct ttaattattt ttattcttta tttcgtacca
    18661 aagattttgt caccggcatc gccgaggccc ggaataatgt atccgtgctc gttcagtccc
    18721 tgatcaatcg atgcggtata cagttcgacg tccgggtgcg ctttttccag cgcagcgata
    18781 ccttctggcg cagcgaccag caccagaact ttgatgctgc tgcagcccgc ttttttcagc
    18841 aggtcgatgg tcgcgataac ggaaccaccg gttgccagca ttgggtcaac gatcagcgcc
    18901 atacgctcat cgatgttaga aaccagtttc tggaagtacg gtaccggctc cagcgtttct
    18961 tcattacggt acataccgac aacgctgatg cgcgcgctcg gaacattttc cagcacaccg
    19021 tccatcatac caagacccgc acgcagaatt ggcacaacgg taattttctt acctttgatc
    19081 tggtcgattt ctaccgggcc gttccagcct tcgatagtta ctttttccgt ttcgaggtcg
    19141 gcggtcgctt cgtaagtcag caggctaccc acttcggaag cgagttcgcg aaagcgcttg
    19201 gtgctgatat cttgctcacg catcagtccc agcttgtgtt tgacgagtgg gtgtttgact
    19261 tccacgatct tcatactctt tctcctttga ggggcagcca caaaaaaatc gacggattat
    19321 acctcctttc ttcaaggcgg caatattctt ttcgttgact ttagtcaaaa tgataacgat
    19381 ttgagataaa gttattttat attcaaatgg ttatgaaaga agatcattcc atccgaaaac
    19441 taacctttgc cctggcacaa gtcttctttc gccgcgcgtc tggggaaaag acgtgcaaaa
    19501 aggttgtgca aagcagcctc gcaaacgttt gctttccctg ttagaattgc gccgaatttt
    19561 atttttctac cgcaagtaac gcgtggggac ccaagcagtg accgataaaa cctctcttag
    19621 ctacaaagat gccggtgttg atattgacgc gggtaatgct ctggttggaa gaatcaaagg
    19681 cgtagtgaag aaaacgcgtc gtccggaagt gatgggcggt ctgggcggct tcggtgcgct
    19741 gtgtgcattg ccgcaaaaat atcgtgaacc cgtgctggtt tccggcactg acggcgtagg
    19801 taccaagctg cgtctggcaa tggacttaaa acgtcacgac accattggta ttgatctggt
    19861 cgccatgtgc gttaatgacc tggtggtgca aggtgcagaa ccgctgtttt tcctcgacta
    19921 ttacgcaacc ggaaaactgg atgttgatac cgcttcagcg gtgatcagcg gcatcgcgga
    19981 aggttgtctg caatcgggct gttcactggt gggtggcgaa acggcagaaa tgccggggat
    20041 gtatcacggt gaagattacg atgtcgcggg tttctgcgtg ggcgtggtag aaaaatcaga
    20101 aatcatcgac ggctctaaag tcagcgacgg cgatgttctg attgcactcg gttccagcgg
    20161 tccgcactcg aacggctatt cgctggtgcg caaaattctt gaagtcagcg gttgtgatcc
    20221 gcaaaccacc gaacttgatg gtaagccatt agccgatcat ctgctggcac cgacccgcat
    20281 ttacgtgaag tcagtgctgg agttgattga aaaggtcgat gtgcatgcca ttgcgcacct
    20341 gaccggcggc ggcttctggg aaaacattcc acgcgtattg ccagataata ctcaggcagt
    20401 gattgatgaa tcttcctggc agtggccgga agtgttcaac tggctgcaaa cggcaggtaa
    20461 cgttgagcgc catgaaatgt atcgcacctt caactgcggc gtcgggatga ttattgccct
    20521 gcctgctccg gaagtggaca aagccctcgc cctgctcaat gccaacggtg aaaacgcgtg
    20581 gaaaatcggt atcatcaaag cctctgattc cgaacaacgc gtggttatcg aataatgaat
    20641 attgtggtgc ttatttccgg taacggaagt aatttacagg caattattga cgcctgtaaa
    20701 accaacaaaa ttaaaggcac cgtacgggca gttttcagca ataaggccga cgcgttcggc
    20761 cttgaacgcg cccgccaggc gggtattgca acgcatacgc tcatcgccag cgcgtttgac
    20821 agtcgtgaag cctatgaccg ggagttgatt catgaaatcg acatgtacgc acccgatgtg
    20881 gtcgtgctgg ctggttttat gcgcattctc agcccggcgt ttgtctccca ctatgccggg
    20941 cgtttgctga acattcaccc ttctctgctg ccgaaatatc ccggattaca cacccatcgt
    21001 caggcgctgg aaaatggcga tgaagagcac ggtacatcgg tgcatttcgt caccgatgaa
    21061 ctggacggtg gcccggttat tttacaggcg aaagtcccgg tatttgctgg tgatacggaa
    21121 gatgacgtca ccgcccgcgt gcaaacccag gaacacgcta tttatccact ggtgattagc
    21181 tggtttgccg atggtcgtct gaaaatacac gaaaacgccg cgtggctgga tggtcaacgt
    21241 ctgccgccgc agggctacgc tgccgacgag taatgccccc gtagttaaag cgccagctct
    21301 gccgctggcg tttttcaatt cacctgtaaa tcgcaagctc cagcagtttt tttccccctt
    21361 ttctggcata gttggacatc tgccaatatt gctcgccata atatccaggc agtgtcccgt
    21421 gaataaaacg gagtaaaagt ggtaatgggt caggaaaagc tatacatcga aaaagagctc
    21481 agttggttat cgttcaatga acgcgtgctt caggaagcgg cggacaaatc taacccgctg
    21541 attgaaagga tgcgtttcct ggggatctat tccaataacc ttgatgagtt ctataaagtc
    21601 cgcttcgctg aactgaagcg acgcatcatt attagcgaag aacaaggctc caactctcat
    21661 tcccgccatt tactgggcaa aattcagtcc cgggtgctga aagccgatca ggaattcgac
    21721 ggcctctaca acgagctatt gctggagatg gcgcgcaacc agatcttcct gattaatgaa
    21781 cgccagctct ccgtcaatca acaaaactgg cttcgtcatt attttaagca gtatctgcgt
    21841 cagcacatta cgccgatttt aatcaatcct gacactgact tagtgcagtt cctgaaggat
    21901 gattacacct atctggcggt ggaaattatc cgtggagaca ccatccgtta cgcgctgctg
    21961 gagatcccat cagataaagt gccgcgcttt gtgaatttac cgccagaagc gccgcgtcga
    22021 cgcaagccga tgattcttct ggataacatt ctgcgttact gccttgatga tattttcaaa
    22081 ggcttctttg attatgacgc gctgaatgcc tattcaatga agatgacccg cgatgccgaa
    22141 tacgatttag tgcatgagat ggaagccagc ctgatggagt tgatgtcttc cagtctcaag
    22201 cagcgtttaa ctgctgagcc ggtgcgtttt gtttatcagc gcgatatgcc caatgcgctg
    22261 gttgaagtgt tacgcgaaaa actgactatt tcccgctacg actccatcgt ccccggcggt
    22321 cgttatcata attttaaaga ctttattaat ttccccaatg tcggcaaagc caatctggtg
    22381 aacaaaccac tgccgcgttt acgccacatt tggtttgata aagcccagtt ccgcaatggt
    22441 tttgatgcca ttcgcgaacg cgatgtgttg ctctattatc cttatcacac ctttgagcat
    22501 gtgctggaac tgctgcgtca ggcttcgttc gacccgagcg tactggcgat taaaattaac
    22561 atttaccgcg tggcgaaaga ttcacgcatc atcgactcga tgatccacgc cgcacataac
    22621 ggtaagaaag tcactgtggt ggttgagtta caggcgcgtt tcgacgaaga agccaacatt
    22681 cactgggcga agcgcctgac cgaagcaggc gtgcacgtta tcttctctgc gccggggctg
    22741 aaaattcacg ccaaactgtt cctgatttca cgtaaagaaa acggtgaagt ggtccgttac
    22801 gcacacatcg ggaccgggaa ctttaacgaa aaaaccgcgc gtctttatac tgactattcg
    22861 ttgctgaccg cagatgcgcg tatcaccaac gaagtacggc gggtatttaa ctttattgaa
    22921 aacccatacc gcccagtgac atttgattat ttaatggtgt caccgcaaaa ctctcgccgt
    22981 ctgttatatg aaatggtaga ccgcgaaatc gccaacgcgc agcaagggct gcccagtggt
    23041 atcaccctga agctaaataa ccttgtcgat aaaggcctgg ttgatcgtct gtatgcggcc
    23101 tccagctccg gcgtaccggt taatctgctg gttcgcggaa tgtgttcgct gatccccaat
    23161 ccggaaggca ttagcgacaa cattcgtgcc atcagtattg ttgaccgtta ccttgaacat
    23221 gaccgggttt atatttttga aaatggcggc gataaaaagg tctacctttc ttccgccgac
    23281 tggatgacgc gcaatattga ttatcgtatt gaagtggcga caccgctgct cgatccgcac
    23341 ctgaagcagc gggtgctgga catcatcgac atattgttca gcgatacggt caaagcacgt
    23401 tatatcgata aagaactcag taatcgctac gttccccgcg gcaatcgccg caaagtacgg
    23461 gcgcagttgg cgatttacga ctacatcaaa tcactcgaac aacctgaata accctatgcc
    23521 aatacacgat aaatcccctc gtccgcagga gtttgctgcg gtcgatcttg gttcaaacag
    23581 ttttcacatg gtcatagccc gtgtggtaga tggtgccatg cagattattg gccgcctgaa
    23641 acagcgagtg catctggcgg acggcctggg gccagataat atgttgagtg aagaggcaat
    23701 gacgcgcggt ttgaactgtc tgtcgctgtt tgccgaacgg ctacaagggt tttctcctgc
    23761 cagcgtctgt atagtcggca cccatacgct gcgtcaggcg ctgaacgcca ctgactttct
    23821 gaaacgcgtg gaaaaggtca ttccctaccc gattgaaatt atttccggta atgaagaagc
    23881 ccgtctgatt tttatgggcg tggaacatac ccaaccggag aaaggtcgca aactggttat
    23941 tgatattggc ggcggatcta cggaactggt gattggtgaa aatttcgaac cgattctcgt
    24001 tgaaagccgc cggatgggtt gtgtcagctt tgcccagctt tacttccctg gcggggtcat
    24061 caataaagag aattttcagc gcgctcgtat ggcggcagca caaaaactgg aaactttaac
    24121 ctggcaattc cgtattcagg gctggaacgt ggcaatgggc gcttccggta ccataaaagc
    24181 cgcccatgaa gtgttaatgg aaatgggcga gaaagacggg ataattaccc cggaacgtct
    24241 ggaaaaactg gtaaaagaag ttttacgtca ccgtaatttc gcatcgctga gtttaccggg
    24301 tctttccgaa gagcggaaaa cagtcttcgt tcctggactg gcgattttat gcggtgtgtt
    24361 tgatgcttta gccatccgtg aactgcgcct ttctgacggg gcgttacgcg aaggcgtact
    24421 gtacgaaatg gaaggacgtt tccgtcatca ggatgtgcgt agtcgcaccg ccagcagcct
    24481 cgccaaccag tatcacatcg acagcgaaca ggcccgacgg gtgctggata ccactatgca
    24541 aatgtacgaa cagtggcggg aacagcaacc gaagctggcg catccgcaac tggaggcgct
    24601 actgcgatgg gccgccatgc tgcatgaggt cgggttgaat atcaaccaca gcggtttgca
    24661 tcgccactcc gcttatattc tgcaaaacag tgacttgccg ggttttaatc aggaacagca
    24721 gctgatgatg gcgacactgg tgcgctatca ccgcaaagcg attaaactcg acgatctgcc
    24781 gcgctttacc ttgtttaaga agaaacagtt cctgccactg attcagctat tgcgccttgg
    24841 cgtattactc aacaatcaac gtcaggcaac caccacaccg ccaacattga cactgattac
    24901 tgatgacagt cactggacac tgcgtttccc gcatgactgg tttagtcaga atgcgttggt
    24961 actgcttgat ctggaaaagg agcaagaata ctgggaaggc gtggctggct ggcggttgaa
    25021 aattgaagaa gaaagtacac ctgaaatcgc cgcttaatgc tttgcgggcc gacgagaaat
    25081 gtcggcccgc attattcagg cactttcgcg aatgggtt
//
LOCUS       DADMJE010000047        25004 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.048, whole genome shotgun sequence.
ACCESSION   DADMJE010000047 DADMJE010000000
VERSION     DADMJE010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 25004)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 25004)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..25004
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.048"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..808
                     /locus_tag="JN001_001744"
     CDS             <1..808
                     /locus_tag="JN001_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
                     /protein_id="HAY9053006.1"
                     /translation="PRWLMSRGKQEQAESILRKIMGNTLATQAVQEIKHSLDHGRKTG
                     GRLLMFGVGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVIN
                     LTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAF
                     AMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTFPMMDKNSWLVAHFHN
                     GFSYWIYGCMGVLAALFMWKFAPETKGKTLEELEALWEPETKKTQQTATL"
     gene            complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JN001_001745"
     CDS             complement(852..1250)
                     /gene="psiE"
                     /locus_tag="JN001_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HAY9053007.1"
                     /translation="MTSLSRPRVEFISTILQTVLNLGLLCLGLILVVFLGKETVHLAD
                     VLFAPEQTSKYELVVYFLYFEFIALIVKYFQSGFHFPLRYFVYIGITAIVRLIIVDHK
                     SPLDVLIYSAAILLLVITLWLCNSKRLKRE"
     gene            1520..1798
                     /locus_tag="JN001_001746"
     CDS             1520..1798
                     /locus_tag="JN001_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053008.1"
                     /translation="MKRNLIKVVKMKPYFAALMLSVSVLPAYAGPLGTADKADLPQSN
                     VSSPMMAQSLRQPDLQPISTDRKTECFRLYTPDRKPGVNCVPDGSTGH"
     gene            complement(1845..3941)
                     /locus_tag="JN001_001747"
     CDS             complement(1845..3941)
                     /locus_tag="JN001_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbH domain-containing protein"
                     /protein_id="HAY9053009.1"
                     /translation="MKKRHLLSLLALGISMACYGETYPAPIGPSQSDFGGVGLLQTPT
                     ARMAREGELSLNYRDNDQYRYYSASVQLFPWLETTLRYTDVRTRQYSSVEAFSGDQTY
                     KDKAFDLKLRLWEESYWLPQVAVGARDIGGTGLFDAEYLVASKAWGPFDFTLGLGWGY
                     LGTSGNVKNPLCSASDKYCYRDNSYKQAGSIDGSQMFHGPASLFGGVEYQTPWQPLRL
                     KLEYEGNNYQQDFAGKLEQKSKFNVGAIYRVTDWADVNLSYERGNTFMFGVTLRTNFN
                     DLRPSYNDNARPQYQPQPQDAILQHSVVANQLTLLKYNVGLADPQIQAKGDTLYVTGE
                     QVKYRDSREGIIRANRIVMNDLPDGIKTIRITENRLNMPQVTTETDVASLKNHLAGEP
                     LGHETKLAQKRVEPVVPQSTEQGWYIDKSRFDFHIDPVLNQSVGGPENFYMYQLGVMG
                     MADLWLTDHLLTTGSLFANLANNYDKFNYTNPPQDSHLPRVRTHVREYVQNDVYVNNL
                     QANYFQHLGNGFYGQVYGGYLETMFGGAGAEVLYRPLDSNWAFGLDANYVKQRDWRSA
                     KDMMKFTDYSVKTGHLTAYWTPSFAQDVLVKASVGQYLAGDKGGTLEIAKRFDSGVVV
                     GGYATITNVLKEEYGEGDFTKGVYVSVPLDLFSSGPTRSRAAIGWTPLTRDGGQQLGR
                     KFQLYDMTSDRSVNFR"
     gene            complement(3941..4678)
                     /locus_tag="JN001_001748"
                     /pseudo
     CDS             complement(3941..4678)
                     /locus_tag="JN001_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418452.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="capsule biosynthesis GfcC family protein"
     gene            complement(4675..5313)
                     /locus_tag="JN001_001749"
     CDS             complement(4675..5313)
                     /locus_tag="JN001_001749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418451.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjbF family lipoprotein"
                     /protein_id="HAY9053010.1"
                     /translation="MKRPALILICLLLQACSATTKELGNSLWDSLFGTPGVQLTDDDI
                     QNMPYASQYMQLNGGPQLFVVLAFAEDGQQKWVTQDQATLVTQHGRLVKILLGGDNLI
                     EVNNLAADPLIKPAQIVDGATWTRTMGWTEYQQVRYATARSVFKWDGTDTVKVGSDET
                     LVRVLDEEVSTDQARWHNRYWIDSEGQIRQSEQYLGADYFPVKTTLIKAAKQ"
     gene            complement(5427..5669)
                     /locus_tag="JN001_001750"
     CDS             complement(5427..5669)
                     /locus_tag="JN001_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053011.1"
                     /translation="MKKVLYGIFAISALAATSAWAAPVQVGEAAGSAATSVSAGSSSA
                     TSVSTVSSAVGVALAATGGGDGSNTGTTTTTTTSTQ"
     gene            complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JN001_001751"
     CDS             complement(6131..7780)
                     /gene="pgi"
                     /locus_tag="JN001_001751"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HAY9053012.1"
                     /translation="MKNINPTQTAAWQALQKHFDEMKDVTIADLFAKDGDRFSKFSAT
                     FDDQMLVDYSKNRITEETLAKLQDLAKECDLAGAIKSMFSGEKINRTENRAVLHVALR
                     NRSNTPILVDGKDVMPEVNAVLEKMKTFSEAIISGEWKGYTGKAITDVVNIGIGGSDL
                     GPYMVTEALRPYKNHLNMHFVSNVDGTHIAEVLKKVNPETTLFLVASKTFTTQETMTN
                     AHSARDWFLKAAGDEKHVAKHFAALSTNAKAVGEFGIDTANMFEFWDWVGGRYSLWSA
                     IGLSIVLSIGFDNFVELLSGAHAMDKHFSTTPAEKNLPVLLALIGIWYNNFFGAETEA
                     ILPYDQYMHRFAAYFQQGNMESNGKYVDRNGNVVDYQTGPIIWGEPGTNGQHAFYQLI
                     HQGTKMVPCDFIAPAITHNPLSDHHQKLLSNFFAQTEALAFGKSREVVEQEYRDQGKD
                     PATLDYVVPFKVFEGNRPTNSILLREITPFSLGALIALYEHKIFTQGVILNIFTFDQW
                     GVELGKQLANRILPELKDDKEISSHDSSTNGLINRYKAWRG"
     gene            8305..9654
                     /gene="lysC"
                     /locus_tag="JN001_001752"
     CDS             8305..9654
                     /gene="lysC"
                     /locus_tag="JN001_001752"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-sensitive aspartokinase 3"
                     /protein_id="HAY9053013.1"
                     /translation="MSEIVVSKFGGTSVADFDAMNRSADIVLSDANVRLVVLSASAGI
                     TNLLVALAEGLEPGERFEKLDAIRNIQFAILERLRYPNVIREEIERLLENITVLAEAA
                     ALATSPALTDELVSHGELMSTLLFVEILRERDVQAQWFDVRKVMRTNDRFGRAEPDVA
                     ALAELAALQLLPRLNDGLVITQGFIGSENKGRTTTLGRGGSDYTAALLAEALHASRVD
                     IWTDVPGIYTTDPRVVSAAKRIDEIAFAEAAEMATFGAKVLHPATLLPAVRSDIPVFV
                     GSSKDPRAGGTLVCNKTENPPLFRALALRRNQTLLTLHSLNMLHSRGFLAEVFGILAR
                     HNISVDLITTSEVSVALTLDTTGSTSTGDTLLTQSLLMELSALCRVEVEEGLALVALI
                     GNDLSKACGVGKEVFGVLEPFNIRMICYGASSHNLCFLVPGEDAEQVVQKLHSNLFE"
     gene            9906..10178
                     /locus_tag="JN001_001753"
     CDS             9906..10178
                     /locus_tag="JN001_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3811 domain-containing protein"
                     /protein_id="HAY9053014.1"
                     /translation="MALPRITQKEMTEREQRELKTLLDRARIAHGRVLTNSETNSIKK
                     EYIDKLMVEREAEAKKARQLKKKQAYKPDPEASFSWSANTSTRGRR"
     gene            complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JN001_001754"
     CDS             complement(10311..11183)
                     /gene="rluF"
                     /locus_tag="JN001_001754"
                     /EC_number="5.4.99.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2604) synthase RluF"
                     /protein_id="HAY9053015.1"
                     /translation="MLPDSSVRLNKYISESGICSRREADRYIEQGNVFLNGKRATIGD
                     QVKPGDIVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSKRVFP
                     IGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITDEFIRGMGAGVPIL
                     GTVTKKCKVKKEAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLSGIPL
                     GEWRDLTDDELIDLFKLIENSSSEAKPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASN
                     GKRFTSPGRKKKGR"
     gene            11531..12479
                     /locus_tag="JN001_001755"
                     /pseudo
     CDS             11531..12479
                     /locus_tag="JN001_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709812.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
     gene            12549..13355
                     /locus_tag="JN001_001756"
     CDS             12549..13355
                     /locus_tag="JN001_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9053016.1"
                     /translation="MQTWLNLQDKIIIVTGGASGIGLAIVEELLAQGANVQMVDIHGG
                     DGQYEGHKGYQFWPTDISSAKEVNHTVAEIIQRFGRIDGLVNNAGVNFPRLLVDEKAP
                     AGQYELNEAAFEKMVNINQKGVFLMSQAVARQMVKQHDGVIVNVSSESGLEGSEGQSC
                     YAATKAALNSFTRSWSKELGKHGIRVVGIAPGILEKTGLRTPEYEEALVWTRNITVEQ
                     LREGYTKNAIPIGRAGRLAEVADFVCYLLSERASYITGVTTNIAGGKTRG"
     gene            13365..13772
                     /locus_tag="JN001_001757"
     CDS             13365..13772
                     /locus_tag="JN001_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sorbose transporter subunit IIA"
                     /protein_id="HAY9053017.1"
                     /translation="MVNAIFCAHGKLACAMLESVQMVYGDARVEAVEFVPGENAGDIV
                     AKLEKLVSIHNQDEWLIAVDLQCGSPWNAAAMLAMRNPRLRVISGLSLPLALELVDNQ
                     DSMNVDELCEHLTQIAKQTCVVWKQLATAEEDF"
     gene            13772..14266
                     /locus_tag="JN001_001758"
     CDS             13772..14266
                     /locus_tag="JN001_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system
                     mannose/fructose/N-acetylgalactosamine-transporter subunit
                     IIB"
                     /protein_id="HAY9053018.1"
                     /translation="MNITLARIDDRLIHGQVTTVWSKVANAQRIIICNDEVYNDEVRR
                     TLLRQAAPPGMKVNVVNIEKAVAVYHNPQYQDETVFYLFTRPQDALAMVRQGVKIDTL
                     NIGGMAWRPGKKQLTKAVSLDDDDINAFHELNNLGVILDLRVVASDPSINIIDKINEQ
                     LIAN"
     gene            14332..15129
                     /locus_tag="JN001_001759"
     CDS             14332..15129
                     /locus_tag="JN001_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY9053019.1"
                     /translation="MEISTLQIIAIFLFSCIAGMGSVLDEFQTHRPLIACTVIGLILG
                     DLKTGIILGGTLELIALGWMNVGAAQSPDSALASIISAILVIVGQQSIATGIAIALPV
                     AAAGQVLTVFARTITVVFQHAADKAAEEARFRTLDILHVSAFGVQALRVAIPALIVSL
                     FVSADMVSNMLSAIPEFVTRGLQIAGGFIVVVGYAMVLRMMGVKYLMPFFFLGFLAGG
                     YLDLSLLAFGGVGVIMALVYIQLNPQWRKAEPQLQATASTALDQLDD"
     gene            15140..15982
                     /locus_tag="JN001_001760"
     CDS             15140..15982
                     /locus_tag="JN001_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000437910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HAY9053020.1"
                     /translation="MEQRKITRSDLVSMFLRSNLQQASFNFERIHGLGFCYDMIPAIK
                     RLYPLKEDQVAALRRHLVFFNTTPAVCGPVIGVTAAMEEARANGAEIDDGTINGIKVG
                     LMGPLAGVGDPLVWGTLRPITTALGASLALSGNILGPLLFFFIFNAVRLAMKWYGLQL
                     GFRKGVNIVSDMGGNVLQKLTEGASILGLFVMGVLVTKWTSINVPLVVSQTHAADGST
                     VTMTVQNILDQLCPGLLALGLTLLMVRLLNKKINPVWLIFALFGLGIIGNALGFLSRF
                     FAPA"
     gene            16016..17245
                     /locus_tag="JN001_001761"
     CDS             16016..17245
                     /locus_tag="JN001_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HAY9053021.1"
                     /translation="MKTTALRLYGKRDLRLETFDLPEMQEDEILATVVTDSLCLSSWK
                     EANLGENHKKVPDDVATNPIIIGHEFCGDILAVGKKWQHKFQPGQRYVIQANLQLPDR
                     PDCPGYSFPWVGGEATHVVIPNEVMEQDCLLAYDGETYFEGSLVEPLSCVIGAFNANY
                     HLQEGSYNHTMGIRPQGRMLILGGTGPMGLLAIDYALHGPVNPSQLVITDTDNDKLSY
                     ARKHYPSEPQTLIHYLNAADAAFDTLMALSGGHGFDDIFVFVPNEGLVTLASSLLATD
                     GCLNFFAGPQDKHFSAPINFYDVHYAFTHYVGTSGGNTDDMRAAVKLIEEKKVQAAKV
                     VTHILGLNAAGETTLELPAVGGGKKLVYTGKYLPLTSLTQIQDQALAAILARHQGIWS
                     GEAEQYLLTHAEAISHD"
     gene            17628..18317
                     /gene="pepE"
                     /locus_tag="JN001_001762"
     CDS             17628..18317
                     /gene="pepE"
                     /locus_tag="JN001_001762"
                     /EC_number="3.4.13.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepE"
                     /protein_id="HAY9053022.1"
                     /translation="MELLLLSNSTLPGKAWLEHALPLIAEQLQGRRSAVFIPFAGVTQ
                     TWDDYTAKTAAVLAPLGVSVTGIHSVVDPVAAIENAEIVIVGGGNTFQLLKQCRERGL
                     LAPITDVVKRGALYIGWSAGANLACPTIRTTNDMPIVDPQGFDALNLFPLQINPHFTN
                     ALPEGHKGETREQRIRELLVVAPELTIIGLPEGNWITVSKGHATLGGPNTTYVFKAGE
                     EAVPLEAGHRF"
     gene            complement(18408..20039)
                     /locus_tag="JN001_001763"
     CDS             complement(18408..20039)
                     /locus_tag="JN001_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HAY9053023.1"
                     /translation="MLTLLHLLSAVALLVWGTHIVRTGVMRVFGARLRTVLSRSVEKK
                     PLAFCAGIGVTALVQSSNATTMLVTSFVAQDLVALAPALVIVLGADVGTALMARILTF
                     DLSWLSPLLIFIGVIFFLGRKQSRAGQLGRVGIGLGLILLALELIVQAVTPITQANGV
                     QVIFASLTGDILLDALIGAMFAIISYSSLAAVLLTAALTAAGIISFPVALCLVIGANL
                     GSGLLAMLNNSAANAAARRVALGSLLFKLVGSLIILPFVHLLAETMGKLSLPKAELVI
                     YFHVFYNLVRCLVMLPFVDPMARFCKTIIRDEPELDTQLRPKHLDVSALDTPTLALAN
                     AARETLRIGDAMEQMMEGLNKVMHGEPRQEKELRKLADDINVLYTAIKLYLARMPKEE
                     LAEEESRRWAEIIEMSLNLEQASDIVERMGSEIADKSLAARRAFSLDGLKELDALYEQ
                     LLSNLKLAMSVFFSGDVTSARRLRRSKHRFRILNRRYSHAHVDRLHQQNVQSIETSSL
                     HLGLLGDMQRLNSLFCSVAYSVLEQSDEDEGRDEY"
     gene            complement(20259..23942)
                     /gene="metH"
                     /locus_tag="JN001_001764"
                     /pseudo
     CDS             complement(20259..23942)
                     /gene="metH"
                     /locus_tag="JN001_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000096005.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
     gene            24142..24966
                     /gene="iclR"
                     /locus_tag="JN001_001765"
     CDS             24142..24966
                     /gene="iclR"
                     /locus_tag="JN001_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418442.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate bypass operon transcriptional
                     repressor IclR"
                     /protein_id="HAY9053024.1"
                     /translation="MVAPIPAKRGRKPAVATAPATGQVQSLTRGLKLLEWIAESNGSV
                     ALTELAQQAGLPNSTTHRLLTTMQQQGFVRQVGELGHWAIGAHAFMVGSSFLQSRNLL
                     AIVHPILRNLMEESGETVNMEVLDQSDHEAIIIDQVQCTHLMRMSAPIGGKLPMHASG
                     AGKAFLAQLSEEQVTKLLHRKGLHAYTHATLVSPVHLKEDLAQTRKRGYSFDDEEHAL
                     GLRCLAACIFDEHREPFAAISISGPISRITDDRVTEFGAMVIKAAKEVTLAYGGMR"
BASE COUNT         5879 a         6611 c         6534 g         5980 t
ORIGIN      
        1 tcctcgctgg ctgatgtcac gcggcaagca agaacaggcg gaaagtatcc tgcgcaaaat
       61 tatgggcaac acgcttgcaa ctcaggcagt acaggaaatt aaacactccc tggatcatgg
      121 ccgcaaaacc ggtggtcgtc tgctgatgtt tggcgtgggc gtgattgtca tcggcgttat
      181 gctctccatc ttccagcaat ttgtcggcat caatgtggtg ctgtactacg cgccggaagt
      241 gttcaaaacg ctgggggcca gcacggatat cgcgctgttg cagaccatta ttgtcggagt
      301 tatcaacctc accttcaccg ttctggcaat tatgacggtg gataaatttg gtcgtaagcc
      361 actgcaaatt atcggcgcac tcggaatggc aatcggtatg tttagcctcg gtaccgcgtt
      421 ttacactcag gcaccgggta ttgtggcgct actgtcgatg ctgttctatg ttgctgcctt
      481 tgccatgtcc tggggtccgg tatgctgggt actgctgtcg gaaatcttcc cgaatgctat
      541 tcgtggtaag gcgctggcaa tcgcggtggc ggcccagtgg ctggcgaact acttcgtctc
      601 ctggaccttc ccgatgatgg acaaaaactc ctggctggtg gcccatttcc acaacggttt
      661 ctcctactgg atttacgggt gtatgggcgt tctggcagca ctatttatgt ggaaatttgc
      721 cccggaaacc aaaggtaaaa cccttgagga gctggaagcc ctctgggaac cggaaacgaa
      781 gaaaacacaa caaactgcta cgctgtaatc ttcctgtcca gcacgccgcg ccagttcggc
      841 gtgctgtctt tttactcccg cttcagccgt ttcgaattac acagccacag agtgatcacc
      901 agtaacagga tcgcagccga gtagatcaac acatccagtg gcgatttatg atcgacgatg
      961 atcaagcgca caatggcggt gatcccaata tagacaaagt aacgtagcgg gaagtgaaaa
     1021 ccggactgaa agtacttcac aatcagcgcg ataaattcga aatagagaaa gtaaaccacc
     1081 agctcatatt tgctggtttg ttctggcgcg aacagcacat ctgccagatg caccgtttct
     1141 ttgccgagga agacaaccaa aatcaggccg aggcacagca ggccaagatt gagtacggtc
     1201 tgcaaaatgg tggagataaa ctccacgcgc ggacgagaga gtgacgtcat agcagtacct
     1261 ccttcacagt ggcgagcttc ctgtataacg caaaaatgtg acggagatct atattttttg
     1321 tgtatgtttt gttcaacctg gatttggagc gcgcctccac caaagccgga tatacctacc
     1381 cgtaggccgg ataagccgcg cctggcggcg catccggcaa gacaaaccgc acccaagccg
     1441 gtaattcaaa aatcacccat tcaggtgatt cccagccacc agcaatgcgc gaaaaatcga
     1501 caatgttcct ctggaacaaa tgaaacgtaa cctgataaag gtggtaaaaa tgaagcctta
     1561 ttttgctgct ttgatgttat cagtctctgt tcttcctgct tatgctggtc cgctcggtac
     1621 tgctgataaa gccgacctac cgcaaagcaa tgtctccagc ccaatgatgg cccagtcgct
     1681 caggcaacca gacctgcaac cgatatcgac ggacaggaag acagaatgtt ttcgccttta
     1741 cacaccagat cgcaaaccgg gggtgaactg cgttcctgat ggctcgacag gccattaaga
     1801 atgaaggtgc cagtgagtgc gaaaactggc acctttccca tgacttagcg gaaattgacg
     1861 ctacggtcgc tggtcatgtc atacaactgg aacttacgcc caagttgctg accaccgtca
     1921 cgcgtcagcg gcgtccagcc aatcgccgca cggctgcgtg tcgggccaga cgagaagaga
     1981 tccaacggta ccgagacata cacgcctttg gtgaagtccc cttcgccgta ctcctctttc
     2041 aaaacgttgg tgatcgtggc atagccaccc accaccacgc cgctgtcaaa gcgtttggcg
     2101 atctccagcg tgccgccttt atcccctgcc agatactgcc cgacgctggc tttcaccaac
     2161 acgtcctggg cgaaagatgg cgtccagtag gcggtcagat gtccggtttt cacgctgtag
     2221 tcggtgaatt tcatcatatc ttttgcacta cgccagtcgc gctgtttaac gtagttggca
     2281 tccagaccaa acgcccagtt actgtccagc ggacgataca acacttcggc ccccgcaccg
     2341 ccaaacatgg tttcgagata acctccatag acctgaccgt agaagccgtt gcccagatgc
     2401 tggaagtagt tggcttgcag gttattcaca tagacatcgt tctgcacata ctcgcgcaca
     2461 tgggtacgaa cgcgcggtaa gtgcgagtcc tgcggcggat tggtgtagtt aaacttgtcg
     2521 tagttgttgg caagatttgc aaacaggctg ccggtggtca gcagatggtc cgtcagccac
     2581 aaatctgcca ttcccatcac gcccagctga tacatgtaaa agttttccgg gccaccgacc
     2641 gactggttca gcaccggatc gatatggaaa tcaaagcgtg atttgtcgat ataccagccc
     2701 tgctcggtgg actgcggaac cactggctcg acgcgttttt gcgccagctt cgtttcgtgg
     2761 cccaacggct ctccggcgag atgatttttc aggctggcga catcggtttc cgtcgtcacc
     2821 tgcggcatgt taagacgatt ttccgtaatg cggatcgttt tgatcccatc cggcagatcg
     2881 ttcatcacga tccgattagc acggatgatc ccttcgcgcg aatcacgata tttcacctgc
     2941 tcgccggtga catacagcgt atcgcctttc gcctggatct gcggatcggc aagtccgaca
     3001 ttgtatttca acagcgttaa ctgattcgcc accaccgaat gctgcaaaat ggcatcctgc
     3061 ggctgcggtt gatattgcgg gcgggcgtta tcgttgtaag acgggcgcag atcgttaaag
     3121 ttggtgcgca gcgtgacgcc aaacataaag gtgttgccac gttcatagct aaggttaacg
     3181 tcggcccaat cggtaacgcg ataaatcgca ccgacgttaa acttactttt ttgctccagc
     3241 ttcccggcaa aatcctgctg ataattattg ccttcatact ccagtttcag gcgcagcggt
     3301 tgccagggcg tctggtattc cacgccgcca aacagtgagg caggaccgtg gaacatctgg
     3361 ctaccgtcga tagatcccgc ctgtttgtag ctgttatcgc gatagcaata tttatcactg
     3421 gctgaacaga gcggattttt cacattaccg ctggtgccca gataacccca gcccaggccg
     3481 agcgtaaaat cgaacggccc ccaggctttg ctggcaacaa gatattccgc atcaaacagc
     3541 cccgtaccgc cgatatccct cgcaccaacc gccacttgcg gcagccagta actctcttcc
     3601 cacaaacgca gtttgagatc gaaggcttta tctttatacg tttgatcgcc agagaacgct
     3661 tcgacgctgc tgtactgccg ggtgcgcacg tcggtgtagc gcagcgttgt ttccagccac
     3721 gggaagagtt gcactgaagc tgagtaataa cggtactgat cgttatcgcg atagttcagg
     3781 ctcaactccc cttcccgcgc catgcgtgcg gtgggcgttt gtaataatcc tacgccaccg
     3841 aaatccgact gcgacgggcc aatgggcgca ggatatgttt cgccgtagca agccatgcta
     3901 atgcccagcg ccagtaagct aagcagatgt ctttttttca ttattggggt atccgctgcg
     3961 tcagagtctg aagaatgtcg gcgttaaggg catcaggcgt ctcactccag acggagtccg
     4021 cgaggccaac ataaataatg ctgccgggca tcggctctac gtgacgcttg ttccagtaag
     4081 ccaccggcgc tttttgcgtg cgtccgtccg ggtaaaccac ccacgcgtag ctgcgatccg
     4141 caccgctaag caggttctgc ccggagagat agctcgccac gtcgcgacct ggagtgaatg
     4201 gctgcttgcc aggacggctg ataagcccga acaacgtgac cgtggacggc ggtggtccga
     4261 cccacagcgt gtagttgccc tgcaacggtg ggttaccgcg ttcggcaacg cgcacgatat
     4321 cgggatcaag attgattttt tgcctgcccg tcactttcaa cgcctgaatt tgctggcgta
     4381 aggcgttaat ggcggcggca tcgtcggcgc tggagtctgc ggcctgttca gccagccgtg
     4441 tcagcaacgc ctgctgctga cgcaatgctg ccgccgttgc cagctcttcg ctaatcaccg
     4501 caccgggcca ccagttgttt gccagccgcg gttagcctac cagatcgatt aaatgctctg
     4561 cgcctgttag tgttttggcc tcactgctgc cattgctgaa caccttgacg gttcctgccg
     4621 cgaagaccga tgacgctccc acactcaaaa gcaacgcgac aaaagtttgt ttaatcattg
     4681 ttttgccgcc ttgatgagag tggttttcac cgggaaataa tccgcgccga gatactgttc
     4741 cgactggcga atttgccctt cgctgtcgat ccagtagcgg ttatgccagc gcgcctggtc
     4801 ggtggagact tcttcgtcca gcacgcgaac cagggtttca tcgctgccga ctttgacggt
     4861 atcggtgcca tcccatttga agactgagcg tgcggtggcg tagcgtacct gctggtactc
     4921 ggtccagccc atcgtgcgcg tccatgttgc accatcaaca atttgtgcgg gtttaatcag
     4981 cgggtcggcg gcaaggttat tcacttcaat caggttgtcg ccgccaagca aaatcttcac
     5041 cagacgacca tgttgtgtga caagagtggc ttgatcctga gtgacccatt tttgttgtcc
     5101 gtcttcagcg aaggccagca ccacaaacaa ttgcggcccg ccattaagct gcatgtactg
     5161 gctggcgtag ggcatatttt gaatatcatc gtccgtcagc tgtacgcctg gcgtgccgaa
     5221 cagactgtcc cacagtgaat tgcccagctc tttagtcgtg gctgaacagg cctgtaatag
     5281 caggcagata agaatgagtg caggtcgctt cacgactctt ctccagaggg gcagaataac
     5341 cacaccggag tgtggttatg gtaaatccct tcatacttca agccacagat gcaatgactc
     5401 aaattatttt ggggatacat actttattac tgggtactgg tggtcgtggt tgtggtggtc
     5461 ccggtattag aaccatcacc gccaccggtt gccgcgagcg cgacacccac cgccgagctt
     5521 acggtgctga cgctggtcgc ggaggaacta cccgccgaaa ccgacgttgc tgccgaccct
     5581 gccgcttcgc ccacctgtac aggtgcagcc cacgcagaag tcgccgcaag cgcagatatg
     5641 gcaaaaatgc catacagaac ttttttcata acaatttccc ttcattgaat gaatggagat
     5701 ttacccaaaa acatttcggg cgggatcgag tatacacaac taaagcatgc gaattacggc
     5761 gcggggaatt agcgatggcg ttttaggata attggaatga atatcaaata taagcttcaa
     5821 cttatattta aataacaata aaaatcataa acttaaaata aaaacaaaag taattaatct
     5881 gcgtattctc cgaaataaac aacgattaaa aatctatttt aggattaacc tcacggtatg
     5941 atttccgtta aatcacagac aaggggattt atctgataaa acaatgccga cttattgtcg
     6001 gcattgtttt taaggttatt taactcctca tactatgcat taatgtcgat attggcatca
     6061 ggctccggtt gccggatgcg gcgtaaacgc cttatccggc ctacatatcg gcatcaggca
     6121 cgcatgatga ttaaccgcgc cacgctttat agcggttaat cagaccattg gtcgagctat
     6181 cgtggctgct gatttctttg tcatctttca gctctggcag aatacggttc gccagttgtt
     6241 tacccaactc cacgccccac tggtcgaagg taaagatgtt caggatcacg ccctgagtaa
     6301 agattttgtg ctcatacagc gcaatcaacg cccccaggct gaacggagtg atttcgcgca
     6361 gcaggatgga gttggtcggg cggttacctt cgaacacttt gaacggcacc acgtagtcaa
     6421 gcgttgccgg atctttaccc tgatcgcgat attcctgctc aaccacttcg cgggatttac
     6481 caaacgccag cgcttcggtc tgggcgaaga agttagacag cagtttctgg tggtgatcag
     6541 agagcgggtt atgggtgata gccggggcga tgaaatcgca cggtaccatt ttggttccct
     6601 ggtggatcag ctggtagaac gcgtgctgac cgttagtgcc tggttcaccc cagataatcg
     6661 ggccagtctg gtaatccaca acgttaccgt tacggtcaac atacttaccg ttggactcca
     6721 tattgccctg ctggaagtac gccgcgaaac ggtgcatata ctggtcatac ggcagaatcg
     6781 cttcagtttc cgcaccaaag aaattgttgt accagatgcc aatcagcgcc agcaggacag
     6841 gcaggttttt ctcggcaggc gtggtggaga aatgcttgtc catcgcgtgt gcgccagaaa
     6901 gcagttcaac gaagttatca aagccgatgg agagaacaat cgacaggcca atcgctgacc
     6961 acaaagagta acggccgccg acccagtccc agaactcgaa catgttggca gtatcaatac
     7021 caaactcgcc aacggctttg gcattggtgg aaagcgccgc aaagtgtttt gcaacgtgtt
     7081 tttcatcacc tgccgctttc aggaaccagt cacgcgcgct atgggcgttg gtcatagttt
     7141 cctgagtggt gaaggtttta gatgctacca agaacagcgt ggtttccggg tttacttttt
     7201 tcagcacttc agcgatgtga gtcccatcga cgttagaaac aaagtgcatg ttcaggtgat
     7261 ttttgtacgg acgcagtgct tcggtcacca tgtacgggcc gaggtcagaa ccaccgatcc
     7321 cgatgttcac tacgtcagtg attgctttgc cggtataacc cttccactca ccggagataa
     7381 tcgcttccga gaaggttttc atcttctcca gcaccgcgtt gacttccggc attacgtctt
     7441 tgccatcaac cagaatcggg gtattgctac ggttacgcag cgctacgtgc agcacggcgc
     7501 ggttttcagt gcggttgatc ttctcgccag agaacatcga cttaatcgcg cccgccagat
     7561 cgcactcttt cgccagatcc tgtaatttcg ccagcgtctc ttcagtgatg cggtttttgg
     7621 agtaatccac cagcatctga tcgtcgaatg ttgcggagaa cttagaaaaa cgatcgccgt
     7681 ctttagcaaa aagatcggcg atcgtaacgt ctttcatttc atcgaagtgt ttctgtagtg
     7741 cctgccaggc agcggtctgc gttggattga tgtttttcat tagcaatact cttctgattt
     7801 tgagaattgt gactttggaa gattgtagcg ccagtcacag aaaaatgtga tggttttagt
     7861 gccgttagcg taatgttgag tgtaaaccct tagcgcagtg aagcatttat tagctgaact
     7921 actgaccgcc aggagtggat gaaaaatccg catgaccccg tcgttgacaa ccgccccgct
     7981 caccctttat ttataaatgt actacctgcg ctagcgcagg ccagaagagg cgcgttgccc
     8041 aagtaacggt gttggaggag ccagtcctgt gataacacct gagggggtgc atcgccgagg
     8101 tgattgaacg gctggccacg ttcatcatcg gctacagggg ctgaatcccc tgggttgtca
     8161 ccagaagcgt tcgcagtcgg gcgtttcgca agtggtggag cacttctggg tgaaaatagt
     8221 agcgaagtat cgctctgcgc ccacccgtct tccgctcttc ccttgtgcca aggctgaaaa
     8281 tggatcccct gacacgaggt agttatgtct gaaattgttg tctccaaatt tggcggtacc
     8341 agcgtagctg attttgacgc catgaaccgc agcgctgata ttgtgctttc tgatgccaac
     8401 gtgcgtttag tagtcctctc ggcttctgct ggtatcacta atctgctggt cgctttagcg
     8461 gaagggctgg aacctggcga gcgattcgaa aaactcgacg ctattcgcaa catccagttt
     8521 gccattctgg aacgtctgcg ttacccgaac gttatccgtg aagagattga acgtctgctg
     8581 gagaacatta ctgttctggc agaagcggcg gcgctggcaa cgtctccggc gctgacagat
     8641 gagctggtca gccacggcga gctgatgtcg accctgctgt ttgtcgaaat cctgcgcgaa
     8701 cgcgatgttc aggcacagtg gtttgatgta cgtaaagtga tgcgtaccaa cgaccgattt
     8761 ggtcgtgcag agccagatgt agccgcgctg gcggaactgg ccgcgctgca gctgctccca
     8821 cgcctcaatg acggcttagt gatcacccag ggatttatcg gtagcgaaaa taaaggtcgt
     8881 acaacgacgc ttggccgtgg aggcagcgat tatacggcag ccttgctggc ggaggcttta
     8941 cacgcatctc gtgttgatat ctggaccgac gtcccgggca tctacaccac cgatccacgc
     9001 gtagtttccg cagcaaaacg cattgatgaa atcgcgtttg ccgaagcggc agagatggca
     9061 acttttggtg caaaagtact gcatccggca acgttgctac ccgcagtacg cagcgatatc
     9121 ccggtctttg tcggctccag caaagaccca cgcgcaggtg gtacgctggt gtgcaataaa
     9181 actgaaaatc ctccgctgtt ccgcgcgctg gcgcttcgtc gcaatcagac tctgctcact
     9241 ttgcacagcc tgaatatgct gcattctcgc ggcttcctcg cggaagtttt cggcatcctc
     9301 gcgcggcata atatttcggt agacttaatc accacgtcag aagtgagcgt ggcattaacc
     9361 cttgatacca ccggttcaac ctccactggc gatacgttgc tgacgcaatc tctgctgatg
     9421 gagctttccg cactgtgccg ggtggaagta gaagaaggtc tggcgctggt cgcgttgatt
     9481 ggcaatgacc tgtcaaaagc ctgcggcgtt ggcaaagagg tattcggcgt actggaaccg
     9541 ttcaacattc gcatgatttg ttacggcgca tccagccata acctgtgctt cctggtgccc
     9601 ggcgaagatg ccgagcaggt ggtgcaaaaa ctgcatagta atttgtttga gtaaatactg
     9661 tatggcctgg aagctatatt tcgggccgta ttgattttct tgtcactatg cttatcaata
     9721 aacgagcctg tactctgtta accaacgtct ttatcgagaa taattgcctt taattttttt
     9781 atctgcatct ctaattaatt atcgaaagag ataaatagtt aagagaaggc aaaatgaata
     9841 ttatcagttc tgctcgcaaa cgaattcccg tacactgaac tctctggctc actgagggca
     9901 ccatcatggc actcccccgt attacccaaa aagagatgac tgaacgcgag cagcgtgaac
     9961 ttaaaacact gctggatcgg gcgcggattg cgcatggtcg cgtactgacc aactccgaaa
    10021 ccaacagcat taagaaagag tacatcgata aattaatggt cgagcgtgag gctgaagcga
    10081 aaaaagcccg ccaattgaag aaaaaacagg cttataaacc ggatcctgaa gcgtcattta
    10141 gctggtcagc aaatacgtcg acgcgcggca ggcgctaatg aacaatcaac gcctgagatt
    10201 ttcactcgtc tgtgtggaca caatcttccc ctcaccctaa ccctctcccc gaaggggcga
    10261 ggggactgtc cgagctcttt ttggacgttt tcatcagtct gaggcgttaa tcagcgtccc
    10321 ttctttttac gccccggcga ggtaaaacgc ttaccgttgg acgccgggcg accgcctttt
    10381 tccgccgttt tttccatctt aacgactgga cgtttgatgc ccgctgtttt cggtttggcc
    10441 ttcgctttag gttttgcctc ggaagaggaa ttttcgatga gcttaaagag gtcgattaac
    10501 tcatcgtcgg ttaaatcgcg ccactccccc agcggaatgc cgcttaagct gacgttcata
    10561 atgcgcgtac gttccagctt tttcacttca tagccgaaat gctcgcacat gcgccggatc
    10621 tgacggttca gcccctgcac cagggtaatg cggaagacaa acggcgcttc ttttttgact
    10681 ttgcactttt tcgtcaccgt cccgaggatc ggcacccccg cccccatacc acgaataaat
    10741 tcatcggtaa tcggtttatc gaccgtcacc agatactctt tctcatgatc gttacccgca
    10801 cggaggatct tattcaccag atcgccgtga ttggtgagga aaatcagccc ctgggagtct
    10861 ttatccaggc ggccaatcgg gaacacgcgt ttgctgtggt taacgaaatc gacaatgtta
    10921 tcgcgctcgc catcttcggt ggtgctgaca ataccgacgg gcttgttcag ggcgataagt
    10981 accaaatctt cggcttcccg aggctcaatc aactgaccgt ttactttcac aatgtcgccg
    11041 ggtttcacct gatcgccaat ggtggctcgc ttgccattaa ggaacacatt gccttgctcg
    11101 atatagcgat ccgcttcgcg gcgtgagcaa attccgcttt cgctgatgta tttatttaaa
    11161 cggactgatg agtcgggcag cataaattct cctgtaaaac gcggaatata ccgtacctct
    11221 tagcggggaa aaacagggtt atgcggcaac gtcgaaatta aatgtgatct gccacgcctt
    11281 ttatcacaaa agtgtctccg gaagtacgat gcaaatttgc ctggcaaaat aaggataatc
    11341 aacatattac gaatcgctgc acacctgtgc tgatgactac tacgcagaga aacaaatgtg
    11401 caagagaaag cgctatatct ccccatgcaa agagtgaaaa atcgctttga aaggccctca
    11461 tgatggggtt atatcagatc aagcggtgag aaagcgtatt tgcacaaatg tgcagaacca
    11521 ggaggcggca atggaaaaca gtgacgatat ccgtttgatt gtgaagattg cccaactcta
    11581 ttacgaacag gatatgacgc aggcgcaaat cgcgcgcgaa ctgggtattt accgcaccac
    11641 catcagccgc ttgcttaaac gaggccgcga tcagggaatt gtcaccatcg ccatcaacta
    11701 tgactacaac gaaaatctct ggctggagca gcaactgaag caaaagtttg gcctgaaaga
    11761 cgttgtggtg gtgtcgggta aatgatgagg atgaagagac tcaactggcg atgatggggt
    11821 tacacggcgc gcaactgctg gatcgcttgc tggagcctgg cgatattgtc ggtttttcct
    11881 ggggtcgcgc ggtgagcgca ctggttgaaa acttgccgca ggcggggcaa tcgcggcagt
    11941 taatctgcgt accaattatt ggcggaccgt ccggtaaact cgaaagccgc tatcatgtaa
    12001 acacattaac ctacagcgcg gcagcgaagc tgaaagggga atcgcatctc gcggattttc
    12061 cggctctgct ggataaccca ttaattcgta atgggatcat gcagtctcag cactttaaaa
    12121 ccatctctgc ctactgggat aatctggatg tcgccctggt gggaattggc tcaccggcca
    12181 ttcgcgacgg cgctaactgg catgcgtttt atggtggtga agagagtgac gacctgaatg
    12241 cccgccaggt tgctggcgat atttgctcgc gcttttttga tattcacggc gcaatggttg
    12301 aaacgaatat gagcgaaaaa acactctcta tcgaaatgaa taaattaaag caggcacgat
    12361 attccattgg cattgccatg agtgaagaaa aatacagcgg aattgttggt gcactgcgtg
    12421 gaaaatatat taattgtctg gtaacgaata gcagcacagc tgaactatta ctgaaataaa
    12481 aatcttcccg atgtttagcg taataaaaat tacggcgggg ccctattatc taaaatcagg
    12541 agtctgttat gcaaacgtgg ttaaatttgc aggataaaat cattattgtc accggcggcg
    12601 catccggtat tggtctggcg attgtagagg aattattagc acaaggcgca aacgtacaga
    12661 tggtagatat tcacggtggc gatggtcaat atgaaggtca taaaggctat cagttttggc
    12721 cgaccgatat ttccagcgcc aaagaggtaa atcatacggt agcggaaatt atccagcgtt
    12781 ttggtcgcat cgacggtctg gtcaataacg ccggggtcaa tttcccgcgt ctgctggtcg
    12841 atgagaaagc gcctgccggg cagtatgaac tcaacgaagc tgcattcgaa aaaatggtca
    12901 atatcaacca gaaaggcgtt tttctgatgt cgcaggcggt ggcgcgacag atggtcaaac
    12961 aacatgatgg cgtgattgtg aatgtttcct cagaaagtgg actggaaggc tcagaaggcc
    13021 aaagctgtta cgccgctacc aaagccgcgc ttaatagctt cacgcgatcc tggtcgaaag
    13081 aattgggtaa acacggtatc cgtgtggtcg gtatcgcgcc ggggattctg gaaaaaacag
    13141 gactgcgcac gccggaatat gaagaagcgc tggtgtggac gcgcaatatc accgtcgagc
    13201 agctgcgtga aggctatacc aaaaacgcca ttcctattgg gcgcgccgga agattagcag
    13261 aagtcgctga ttttgtttgt tatctgctgt ctgaacgcgc cagctatatc accggagtaa
    13321 ccactaacat tgcgggcggc aaaacgcgcg gctaaggagg ctttatggtc aatgccattt
    13381 tttgcgccca cggcaaatta gcttgcgcca tgctggaatc ggttcagatg gtgtacggcg
    13441 acgccagggt cgaggcagtt gaatttgtgc ccggcgagaa cgccggagac atcgtagcaa
    13501 agctggaaaa gttagtaagc attcacaatc aagatgagtg gctgattgcc gtggatttac
    13561 agtgcggcag cccgtggaat gcggcagcga tgcttgcgat gcgcaatcct cgtctgcggg
    13621 taatcagcgg cctttctctg ccgctggcgc tcgaactggt tgataaccag gacagcatga
    13681 atgttgatga actgtgtgaa cacctgacgc aaatcgcaaa gcaaacctgc gttgtctgga
    13741 aacaactggc aacggcagag gaggatttct gatgaacatt acgctcgccc gcattgatga
    13801 ccgcctgatc cacggtcagg tcactaccgt ctggtcgaaa gtggctaacg cccagcgcat
    13861 tattatctgc aatgacgaag tttataacga tgaagttcgc cggacattat tgcgtcaggc
    13921 tgcgccaccg ggaatgaagg ttaacgtggt caatattgaa aaagccgtcg ctgtttatca
    13981 caacccgcaa tatcaggacg aaaccgtttt ttatcttttc actcgcccac aggatgcctt
    14041 agcgatggtt cgccaagggg taaaaataga caccctaaat attggcggca tggcctggcg
    14101 gcccggtaaa aaacagttaa ccaaagcggt ttcattagat gatgatgata ttaacgcatt
    14161 tcatgagtta aataatcttg gcgtcatact ggatttacgc gtcgtagcgt cagatccctc
    14221 aatcaatatt atcgacaaaa taaacgaaca gttaatcgca aattaaataa tagcgcttgt
    14281 gtacatatgc tttaacaggc agggatgacg acacttaaaa ggtgaaaaat catggaaata
    14341 agtaccctac aaatcattgc tatatttctt ttttcctgta ttgccggaat gggcagcgtg
    14401 ctggatgaat ttcagactca tcgcccgtta attgcctgta cggtgattgg tttaattctc
    14461 ggtgatttaa aaaccggaat aatactcggt ggtacgctgg aattgatagc tctcggctgg
    14521 atgaacgtcg gcgcggcgca atctccggat tctgcactcg ccagcataat ctccgccatt
    14581 ctggttatcg ttggtcagca aagcatcgcc accggaatcg ccatcgcgtt gcctgtggct
    14641 gcggcaggcc aggtgctgac tgtgtttgcc cgtaccatca ccgtagtgtt ccagcacgcg
    14701 gcggataaag cagcggaaga agcacggttt cgcactctcg atattctgca tgtctccgcg
    14761 tttggcgtgc aggcgctgcg cgttgctatt ccggcactga ttgtctcact gttcgtcagc
    14821 gccgatatgg tgagcaatat gctgagcgcg ataccggaat tcgtgacgcg cggtctgcaa
    14881 attgctggcg gttttatcgt ggtggtcggt tacgccatgg tgctacgtat gatgggcgtg
    14941 aaatatttga tgcctttctt tttcctcggt ttcctcgcag gtggctacct cgatctcagt
    15001 ctgctggcgt tcggtggcgt cggcgtgatc atggccctgg tctacatcca gctaaatcca
    15061 cagtggcgta aagctgaacc tcaactccag gccaccgcct ccaccgccct tgaccaactt
    15121 gacgattaac ggagccatca tggaacagag aaaaattaca cgcagcgatc tggtgagcat
    15181 gtttctgcgc tccaacctgc aacaggcgtc ctttaacttt gaacgtattc acgggctggg
    15241 tttttgctac gacatgatcc ccgccatcaa acgactttac ccattaaaag aggatcaggt
    15301 tgcggcgctc aggcgacacc tggtgttctt caataccacg ccagccgtat gtggcccggt
    15361 catcggcgtc actgccgcca tggaagaggc gcgggccaac ggcgcggaaa ttgatgacgg
    15421 taccattaac ggcatcaaag tcggtctgat gggaccattg gcaggagttg gcgatccact
    15481 ggtctgggga acgctgcgcc cgattaccac cgcgctcggc gcatctctgg cactttcggg
    15541 caacattctc ggcccgctgc tgttcttctt tattttcaat gcggtgcgtc tggcgatgaa
    15601 gtggtatggc ctacagctcg gctttcgcaa aggggtgaat atcgtcagcg atatgggcgg
    15661 gaatgtgctg caaaaactca ccgaaggcgc gtcgattctc ggactgtttg tgatgggcgt
    15721 gctggtcacc aaatggacgt caatcaacgt accgttggtg gtttcacaaa cgcatgccgc
    15781 cgatggctcc accgtcacca tgaccgtgca gaacattctc gaccaacttt gccctggttt
    15841 gctggcgctc ggtctgacgc tgcttatggt tcgtctgctc aacaaaaaaa ttaacccggt
    15901 atggctgatt ttcgccctgt ttggcttagg gattatcggt aatgcgctgg gcttcctgtc
    15961 cagattcttc gccccggcat gactgccggg gccatcgctc aacatgaggt ggtttatgaa
    16021 aacaacagct ctgcgtcttt atggtaaacg tgatttacgc ctggaaacct ttgaccttcc
    16081 tgaaatgcag gaggatgaaa tcctcgcgac ggtggtcact gacagcctgt gcctctcttc
    16141 ctggaaagag gccaatctgg gtgaaaacca taaaaaagta cccgacgatg tggcgaccaa
    16201 ccccatcatc atcggccacg agttttgcgg cgatattctg gccgtgggta aaaagtggca
    16261 gcacaaattc cagccgggtc agcgttatgt gattcaggcc aacctgcaac tccccgaccg
    16321 cccggactgc cccggctact ccttcccgtg ggtgggcggc gaagccacgc atgtagttat
    16381 tcccaacgag gtcatggaac aagattgcct gctggcatac gacggcgaaa cctattttga
    16441 aggctcactg gttgaaccgc tttcctgcgt gattggcgcg ttcaacgcca actatcatct
    16501 tcaggaaggt agttataacc acacgatggg gattcgcccg caagggcgca tgctgatcct
    16561 cggcggcacc ggaccaatgg gactgttggc gattgattat gcgctacatg gacccgttaa
    16621 cccgtcgcag ctcgtcatta ccgataccga caacgataaa ttgagttatg cgcgcaagca
    16681 ctatccatca gaaccgcaaa cactgattca ttatctcaat gccgccgatg cagcatttga
    16741 tacgctaatg gcgctgagtg gcggtcacgg cttcgatgat attttcgtct ttgtgcctaa
    16801 tgaaggactg gtgactctcg cctcttcctt gctggcgaca gatggttgcc tgaatttctt
    16861 cgccggaccg caggataaac atttcagcgc gccaattaat ttctacgatg tgcattatgc
    16921 atttacccac tacgtgggca cgtcaggcgg caataccgac gacatgcgcg cggcggtcaa
    16981 actgattgaa gagaaaaaag tgcaggccgc aaaagtggta acacatattc ttgggctgaa
    17041 tgccgcgggc gaaaccacgc ttgaattgcc tgccgtcggc ggcggcaaaa agctggtgta
    17101 taccgggaaa tacctgccgc tgacgtcact cacgcagatt caggatcaag cactggcggc
    17161 gattctggcg cgtcatcagg ggatctggtc cggtgaggcg gagcaatatc tgctcactca
    17221 tgcagaggca atttcccatg attaatcgcg ctacttaact ctgcatgtcg ctggctggtc
    17281 gccgcggcaa cttcgcgacc tgatgtgcgg ctgattgctg aagcggccca atgtgcacga
    17341 gaaggataaa aaaacatcag cgccttaagg ggcgctcaaa ttggtggcaa agtacacatt
    17401 gtttatgccg gatgcggaat aaagccttat tcggcctaca taatctcgaa aattcaatat
    17461 attgcagtta tctggtaggc ctggtaagcg tagcgcatca ggcaatgctg tgtttgtcat
    17521 cagtctcagc tcccggtgca atacgtgaca tcgtgagcca tgtcagtaag tggttaaatt
    17581 cgcagtggta gcatgccttc cgtgatttct tactaaccgg agaagtaatg gaactgcttt
    17641 tattgagtaa ctcgacgctg ccgggtaaag cctggctgga acatgcactg ccgctaattg
    17701 ctgaacagtt gcagggtcgc cgctcagcgg tgtttatccc tttcgctggc gtaacgcaga
    17761 cctgggatga ttacacagcg aaaacggctg cggttctcgc tccgctgggt gtttctgtca
    17821 ccggtattca tagcgttgtc gatcccgttg ccgcgattga aaatgctgag atcgtgattg
    17881 tcggcggcgg gaatactttc cagttgctga aacagtgccg cgagcgcggg ctgctggcac
    17941 caattactga cgtggttaaa cgtggtgcgc tgtatattgg ctggagcgca ggcgctaacc
    18001 ttgcttgccc aaccattcgt accaccaacg atatgccgat tgtcgatccg caaggtttcg
    18061 atgcgctaaa tctgttcccg ttgcaaatca acccgcactt caccaacgcg ctgccggaag
    18121 gccataaagg tgaaacccgt gagcagcgta ttcgcgaact gctggtcgtc gcgccagaac
    18181 tgacgattat tggtctaccg gaaggtaact ggatcacagt gagtaaaggt cacgctacgc
    18241 tgggtggccc gaacaccacc tatgtgttta aggccggtga agaagcggtt ccgctggaag
    18301 ctggtcaccg tttttaagtg aattgccgga tgcatgatcc ggcatcttgt tcatagtgcc
    18361 tgatgcgacg cttgacgcgt cttatcaggc ctacaggatt cacaatatta atactcgtcc
    18421 cgtccttcat cttcatccga ctgttccagc acactgtaag ccaccgaaca aaacagcgag
    18481 ttcaggcgct gcatatctcc cagtaagcct aaatgtagcg aactggtttc aatgctctgc
    18541 acgttttgct gatgcaggcg atcgacgtgg gcgtgggaat agcggcgatt aagaatgcga
    18601 aagcgatgct tactacggcg caaacgacga gcgctggtga catcgccaga gaagaacacc
    18661 gacattgcca gctttaaatt actgagcaat tgctcataga gcgcatccag ttccttcaac
    18721 ccatcaagcg aaaatgcccg ccgtgctgcc agtgatttgt cagcaatttc gctgcccatg
    18781 cgctcgacga tatcggaggc ctgttcaagg ttgagcgaca tttcaataat ctccgcccag
    18841 cggcgcgact cttcctccgc cagctcttct tttggcatcc gcgccagata cagcttaatg
    18901 gcggtgtaga gaacgttgat atcatctgcc agcttacgca gctctttctc ctgccgtggc
    18961 tcaccgtgca tcactttatt caacccttcc atcatctgtt ccatggcgtc gccaatgcgc
    19021 agggtttcgc gcgcggcgtt cgccagagca agcgtgggcg tatccagcgc gctgacatcc
    19081 agatgtttag gccgtagctg ggtatccagt tccggttcat cgcgaataat cgttttgcaa
    19141 aaccgtgcca tcgggtcaac aaatggcagc atgaccaggc aacgtacaag gttgtagaag
    19201 acgtggaaat agatcaccag ttccgctttt ggcaatgaca gcttccccat tgtctctgcc
    19261 agcaaatgga caaacggcag gataatcagg ctacccacca gcttaaacag cagactaccc
    19321 agcgcgacac ggcgggctgc ggcattggcg gcactgttgt tgagcatcgc cagcaggccg
    19381 gaaccgaggt tagcaccaat caccagacag agcgccacgg ggaaggagat aatgcctgcg
    19441 gcggtcagag ccgcggtcag cagtacagca gcaaggctgg agtagctgat aatggcgaac
    19501 atcgcgccaa tcagcgcatc cagcagaata tcgccggtca gcgaggcaaa gatcacctga
    19561 acgccgtttg cctgggtgat cggcgttacg gcctgcacaa tcaactccag cgccagcaaa
    19621 atcagcccaa gaccaatacc gacgcggccc agttgcccgg cgcgtgactg tttgcgtccg
    19681 aggaaaaaaa tcacgccgat aaaaataagt aacggtgaca gccaggataa gtcgaaggtg
    19741 agaatacgcg ccattagcgc cgtcccgaca tctgccccca gcacaatgac cagagccggt
    19801 gcgagggcta ccagatcctg agcgacgaac gaggtcacca gcatggtggt ggcattactg
    19861 ctctgtacca gtgcggtaac gccgatcccc gcgcaaaagg cgagcggctt tttttcgacg
    19921 ctccggctaa ggacagtacg caaacgcgcg ccgaagacgc gcattacgcc ggttcgaaca
    19981 atatgagtcc cccagaccag cagggcgacg gcagaaagca ggtgaagcag cgttaacacg
    20041 agttcaggtt ctccttatcg ttatatgttc ctgaagcaat tgaatgacca aaggaccgga
    20101 aacacgctga ctggcatctt tactgtgcct tttgacattc gtttttccgg ctaagattat
    20161 tccagcctga ttccagtata agtgtttcat attaataaag agacagggca ctcattgagc
    20221 gccctgtttg ttgtaaggaa aagtgacaga tttgtgaatc agtccgcgtc ataccccaga
    20281 ttcggtgcca gccagcgctc aacatctgag acgctcatac ctttacggcg ggcatagtct
    20341 tcaacctgat cgcgctgaat ttgcgccacg gcgtagtact tgctgtccgg gtggctgaaa
    20401 taccaacccg aaaccgatgc accgggccac atggcgaaag attctgtgag tttcatgccg
    20461 gtatgttttt ccacttccag cagctcccag atggtggctt tttccgtatg ttccgggcag
    20521 gccgggtagc ccggtgccgg acggatgccc tagtagtttt cgcggatcag ttcttcgttg
    20581 ctgaggttct cgttcggcgc atagccccag tagactttac gcacacgctc atggagatac
    20641 tccgcaaagg cttcggctaa acggtcggca agcgctttca ccatgatttt gttgtaatca
    20701 tcgtgctgcg cttcaaaggc atcagccagt gcgtcctctt ccagcccgcc agtcacggca
    20761 aatgcgccga tgtaatctgc tttaccagaa agcttcggcg caacaaagtc agcgagacag
    20821 tagttagcga atcccgtttt ttcggtctgt tgacgcagat ggtggctgac attgatcaca
    20881 tgggtgcgcg tttcgtcacg gtagatttca atgtcatcgc ccacacggtt tgccgggaac
    20941 aggcccacca cgccacgcgg attcagcgtt ttctcggcgc ttaatttatc cagcatgtcg
    21001 ttggcgtctt taaacagccg ctgcgcctca acgcccacca cttcatcttc cagaatgcgc
    21061 ggatacttcc cggccagcga ccaggtcata aagaacggtg tccagtcgat gcaattacgc
    21121 agagtttcga tgctggcttc aacttcctgc acgccgagac ggtgcgccac cggcggcgtg
    21181 taagcctgcc agtcaaaagc gaagtcgtta tcgcgcgccg cttccagcgt gaccggtggt
    21241 gtgcgcggtt tcttgcgccc gtgctgaata cgtacggttt cgtactcctt gcgggtacga
    21301 gcgacaaaat catcgcgctg agtatcggaa agcagcgccg ccaccacacc aacggtgcgc
    21361 gaggcattct gcacatacac cgtcgggccg ctgtagttct gctcaatttt caccgccgtg
    21421 tgcgcttttg aggtggtcgc gccaccgatc agtaacggaa tggtgaagcc ctgacgctcc
    21481 atctctttcg ccacgttaac catctcgtcc agcgacggcg tgataagccc cgaaaggcca
    21541 atcaaatcag cattcacttc tttagcagta cggagaattt tttccgcagg caccatcacg
    21601 ccgagatcga caatttcgta gttgttacat tgcagcacca cgccaacgat atttttaccg
    21661 atatcgtgga cgtcgccctt cacggtggcg atcaccatct tgccgttggt tttgccctgc
    21721 tctttgctgg cttcaataaa cggttcgaga tacgccaccg cctgtttcat gacgcgcgcc
    21781 gatttgacca cctgtggcag gaacattttg ccttcgccaa acagatcgcc gaccacgttc
    21841 atgccgtcca tcaacgggcc ttcaatcact tcaatcgggc gcgtagcctg ctggcgggct
    21901 tcttcggtat cctgctcgat aaactcggta atgcctttga ccagcgagta ttccagacgt
    21961 ttattcactt cccacgagcg ccactccgcc tgctgggcgt tatcggtgtc gtcggttttg
    22021 ctgccgcgat atttctcggc aagctccagt aaacgctcag tgccatcgtc acgacgatta
    22081 agaatcacat cttccaccgc gtcgcgcagt tcagcgggta ggtcgtcgta aatcgccagt
    22141 tgccccgcgt tgacgatccc catatccatg ccattgcgaa tagcgtagta gaggaacact
    22201 gcgtgaatgg cttcgcgcac cggatcgttg ccacggaatg agaaagaaac gttagatacg
    22261 ccgccggaaa tcagcgcgtg cggcagttcg cgtttgatgt cttcacacgc gccgataaag
    22321 tcctgcgcgt agttgttgtg ctcttcaata ccggtggcga ccgcgaagat gttcgggtcg
    22381 aagatgatat cttctggcgg gaagccaacc tcttcggtga ggattttgta cgcccgacgg
    22441 caaatctcga ttttccgtgc gcgagtatcg gcctgtccct gttcatcaaa ggccatcacc
    22501 accactgccg caccgtagcg acgcaacaat ttcgcgtgat ggataaaggc gtcgacgccc
    22561 tctttcatcg agattgagtt aacaatgcct ttgccctgaa tacacttcag ccctttttcg
    22621 ataacgtccc attttgagga gtcgatcata atcggcacgc gagcgatatc cggttcaccg
    22681 gcaatcagat tgagaaaacg caccatcgcc gcttcggcat cgagcatccc ttcatccatg
    22741 ttgatatcga taatctgcgc gccgttttcc acctgctgac gcgccacatc ctgcgcctcg
    22801 ctgtatttct cttctttgat caggcgcttg aacttagcag agccggtgac gttggtgcgt
    22861 tcacccacgt tcacaaacag gctatcgtcg ccaatgttca gcggctccag gccagacaaa
    22921 cggcaggcta cgggaatttc cggcagtttg cgcggcgcta atccttctac tgcacgactc
    22981 atcgctgcaa tatgttgcgg cgtggtcccg cagcaaccac cgacgatatt gagaaagccc
    23041 gcttgcgccc attcacgtat ctgttttgcc atcgtgtcgg cgtcgagatc gtattcacca
    23101 aaggcgttag gcagcccggc gttcgggtgg gcggtgacgt agcattccgc aatccgtgat
    23161 agttcctgca cgtactggcg cagttcatcg ggccccagcg cacagttcag gccaaaggtt
    23221 agcgcttcgg cgtggcgcaa tgagttgtaa aatgcttcgg tggtctgccc ggagagcgtg
    23281 cgcccggagg cgtcggtgat ggtgccggag atcataatcg gcagctcaac gcccagcgct
    23341 tcaaactccg ttttcaccgc aaaaaccgcc gctttggcgt taagggtgtc gaaaacggtt
    23401 tcaatcagga tcagatccgc accaccttcc accagcgctt tggtggattc gcaataggcc
    23461 gccaccagct ggtcaaaagt gatgttgcgg aatgccggat cgttgacgtc cggagaaata
    23521 gacgccgtgc ggttggttgg gccgagaaca ccggcaacgt agcgcggttt ctccggcgtg
    23581 cgcgcggtcc actcgtcagc acaggcgcgc gccagtttcg ccgccgcaaa gttgatttcc
    23641 gccgacaggg attccatctg gtaatccgcc atcgcaatgg tcgtggagtt gaaggtgttg
    23701 gtttcgatga tatccgcgcc cgcttcaaag taggcgttgt ggatagcggc gatcacttcc
    23761 ggtttgctga gcaccagcag gtcgttgttg cctttgagat cgcatggcca gtcggcaaag
    23821 cgttcaccac gaaaatcggc ttcgttcagt cgataactct ggatcatggt gcccataccg
    23881 ccgtccagca ccagaatacg ttcatttaac tgcgcacgca gttgttccac tttgctgctc
    23941 acacttgctc ccgacacgct caacccagat ttaataaaaa ttcaacaaac catactggca
    24001 taaacgcatc tgtggtaaaa gcgaccacca cgcaacatga gatttgttca acattaactc
    24061 atcggatcag ttcagcaact attgcattag ctaacaataa aaatgaaaat gattcccacg
    24121 atgcagaaaa aggagactgt catggtcgca cccattcccg cgaaacgcgg cagaaaaccc
    24181 gccgttgcca ccgcaccagc gactggacag gttcagtctt taacgcgtgg cctgaaatta
    24241 ctggagtgga ttgccgaatc caatggcagt gtggcactca cggaactggc gcaacaagcc
    24301 gggttaccca attccacgac ccaccgcctg ctaaccacaa tgcaacagca gggtttcgtg
    24361 cgtcaggttg gcgaactggg acactgggca atcggcgcac atgcctttat ggtcggcagc
    24421 agctttctcc agagtcgtaa tttgttagca attgttcacc ctatcctgcg caatctaatg
    24481 gaagagtctg gcgaaacggt caatatggag gtgcttgatc aaagcgatca cgaagcgatt
    24541 attatcgacc aggtacagtg tacgcatctg atgcgaatgt ccgcgcctat cggcggtaaa
    24601 ttgccgatgc acgcttccgg tgcaggtaaa gcctttttag cccaactgag cgaagaacag
    24661 gtgacgaagc tgctgcaccg caaagggtta catgcctata cccacgcaac gctggtgtct
    24721 cctgtgcatt taaaagaaga tctcgcccaa acgcgcaaac ggggttattc atttgacgat
    24781 gaggaacatg cgctggggct acgttgcctt gcagcgtgta ttttcgatga gcaccgtgaa
    24841 ccgtttgccg caatttctat ttccggaccg atttcacgta ttaccgatga ccgcgtgacc
    24901 gagtttggcg caatggtgat taaagcggcg aaggaagtga cactggcgta cggtggaatg
    24961 cgctgacttt ttctggcggg cagaggcaat attctgccca tcat
//
LOCUS       DADMJE010000048        24987 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.049, whole genome shotgun sequence.
ACCESSION   DADMJE010000048 DADMJE010000000
VERSION     DADMJE010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24987
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.049"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(111..449)
                     /locus_tag="JN001_001766"
                     /pseudo
     CDS             complement(111..449)
                     /locus_tag="JN001_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308538.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(565..1116)
                     /gene="maa"
                     /locus_tag="JN001_001767"
     CDS             complement(565..1116)
                     /gene="maa"
                     /locus_tag="JN001_001767"
                     /EC_number="2.3.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HAY9053025.1"
                     /translation="MSTEKEKMIAGELYRSADETLSRDRLRARQLIHRYNHSLAEEHT
                     LRQQILADLFGQVTEAYIEPTFRCDYGYNIFLGNNFFANFDCVMLDVCPIRIGDNCML
                     APGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGDNVVVASGA
                     VVTKGVPDNVVVGGNPARIIKKL"
     gene            complement(1288..1506)
                     /gene="hha"
                     /locus_tag="JN001_001768"
     CDS             complement(1288..1506)
                     /gene="hha"
                     /locus_tag="JN001_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY9053026.1"
                     /translation="MSEKPLTKTDYLMRLRRCQTIDTLERVIEKNKYELSDNELAVFY
                     SAADHRLAELTMNKLYDKIPSSVWKFIR"
     gene            complement(1532..1906)
                     /gene="tomB"
                     /locus_tag="JN001_001769"
     CDS             complement(1532..1906)
                     /gene="tomB"
                     /locus_tag="JN001_001769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001741190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hha toxicity modulator TomB"
                     /protein_id="HAY9053027.1"
                     /translation="MDEYSPKRHDIAQLKFLCETLYHDCLANLEESNYGWVNDPTSAI
                     NLQLNELIEHIATFALNYKIKYNEDNKLIEQIDEYLDDTFMLFSSYGINMQDLQKWRK
                     SGNRLFRCFVNATKENPASLSC"
     gene            complement(2452..5601)
                     /locus_tag="JN001_001770"
     CDS             complement(2452..5601)
                     /locus_tag="JN001_001770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY9053028.1"
                     /translation="MPNFFIDRPIFAWVIAIIIMLAGGLAILKLPVAQYPTIAPPAVT
                     ISASYPGADAKTVQDTVTQVIEQNMNGIDNLMYMSSNSDSTGTVQITLTFESGTDADI
                     AQVQVQNKLQLAMPLLPQEVQQQGVSVEKSSSSFLMVVGVINTDGTMTQEDISDYVAA
                     NMKDAISRTSGVGDVQLFGSQYAMRIWMNPNELNKFQLTPVDVITAIKAQNAQVAAGQ
                     LGGTPPVKGQQLNASIIAQTRLTSTEEFGKILLKVNQDGSRVLLRDVAKIELGGENYD
                     IIAEFNGQPASGLGIKLATGANALDTAAAIRAELAKMEPFFPSGLKIVYPYDTTPFVK
                     ISIHEVVKTLVEAIILVFLVMYLFLQNFRATLIPTIAVPVVLLGTFAVLAAFGFSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMAEEGLPPKEATRKSMGQIQGALVGIAMVLS
                     AVFVPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATMLKPIAKGDHGEG
                     KKGFFGWFNRMFEKSTHHYTDSVGGILRSTGRYLVLYLIIVVGMAYLFVRLPSSFLPD
                     EDQGVFMTMVQLPAGATQERTQKVLNEVTHYYLTKEKNNVESVFAVNGFGFAGRGQNT
                     GIAFVSLKDWADRPGEENKVEAITMRATRAFSQIKDAMVFAFNLPAIVELGTATGFDF
                     ELIDQAGLGHEKLTQARNQLLAEAAKHPDMLTSVRPNGLEDTPQFKIDIDQEKAQALG
                     VSINDINTTLGAAWGGSYVNDFIDRGRVKKVYVMSEAKYRMLPDDIGDWYVRAADGQM
                     VPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVG
                     YDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALL
                     AATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLIEATLDAVRMRL
                     RPILMTSLAFILGVMPLVISTGAGSGAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVR
                     RRFSRKNEDIEHSHTVDHH"
     gene            complement(5624..6817)
                     /gene="acrA"
                     /locus_tag="JN001_001771"
     CDS             complement(5624..6817)
                     /gene="acrA"
                     /locus_tag="JN001_001771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrA"
                     /protein_id="HAY9053029.1"
                     /translation="MNKNRGFTPLAVVLMLSGSLALTGCDNKQAQQGGQQMPAVGVVT
                     VKTEPLQITTELPGRTSAYRIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPATYQ
                     ATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQQANAAVTAA
                     KAAVETARINLAYTKVTAPISGRIGKSNVTEGALVQNGQATALATVQQLDPIYVDVTQ
                     SSNDFLRLKQELANGTLKQENGKAKVSLITSDGIKFPQDGTLEFSDVTVDQTTGSITL
                     RAIFPNPDHTLLPGMFVRARLEEGLNPNAILVPQQGVTRTPRGDATVLVVGADDKVET
                     RPIVASQAIGDKWLVTEGLKAGDRVVISGLQKVRPGVQVKAQEVTADNNQQAASGAQP
                     EQSKS"
     gene            6959..7606
                     /gene="acrR"
                     /locus_tag="JN001_001772"
     CDS             6959..7606
                     /gene="acrR"
                     /locus_tag="JN001_001772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrR"
                     /protein_id="HAY9053030.1"
                     /translation="MARKTKQEAQETRQHILDVALRLFSQQGVSSTSLGEIAKAAGVT
                     RGAIYWHFKDKSDLFSEIWELSESNIGELELEYQAKFPGDPLSVLREILIHVLESTVT
                     EERRRLLMEIIFHKCEFVGEMAVVQQAQRNLCLESYDRIEQTLKHCIEAKMLPADLMT
                     RRAAIIMRGYISGLMENWLFAPQSFDLKKEARDYVAILLEMYLLCPTLRNPATNE"
     gene            7734..11096
                     /gene="mscK"
                     /locus_tag="JN001_001773"
     CDS             7734..11096
                     /gene="mscK"
                     /locus_tag="JN001_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel MscK"
                     /protein_id="HAY9053031.1"
                     /translation="MTMFQYYKRSRHFVFSAFIAFVFVLLCQNTAFARASSNGDLPTK
                     ADLQAQLDSLNKQKDLSAQDKLELQDLTDTLATLDKIDRIKEETVQLRQKVAEAPEKM
                     RQATAALTALSDVDNDEETRKILSTLSLRQLETRVAQALDDLQNAQNDLASYNSQLVS
                     LQTQPERVQNAMYNASQQLQQIRSRLDGTDVGETALRPSQKVLMQAQQALLNAEIDQQ
                     RKSLEGNTVLQDTLQKQRDYVTANSARLEHQLQLLQEAVNSKRLTLTEKTAQEAVSPD
                     EAARIQANPLVKQELEINQQLSQRLITATENGNQLMQQNIKVKNWLERALQSERNIKE
                     QIAVLKGSLLLSRILYQQQQTLPSADELENMTNRIADLRLEQFEVNQQRDALFQSDAF
                     VNKLEEGHTNEVNSEVHDALLQVVDMRRELLDQLNKQLGNQLMMAINLQINQQQLMSV
                     SKNLKSILTQQIFWVNSNRPMDWDWIKAFPQSLKDEFKSMKITVNWEKAWPAVFIAFL
                     AGLPLLLIVGLIHWRLGWLKAYQQKLASAVGSLRNDSQLNTPKAILIDLIRALPVCLI
                     ILAVGLILLTMQLNISELLWSFSKKLAIFWLVFGLCWKVLEKNGVAVRHFGMPEQQTS
                     HWRRQIVRISLALLPIHFWSVVAELSPLHLMDDVLGQAMIFFNLLLIAFLVWPMCRES
                     WRDKESHTMRLVTITVLSIIPIALMVLTATGYFYTTLRLSGRWIETVYLVIIWNLLYQ
                     TVLRGLSVAARRIAWRRALARRQNLVKEGAEGAEPPEEPTIALEQVNQQTLRITMLLM
                     FALFGVMFWAIWSDLITVFSYIDSITLWHYNGTEAGAAVVKNVTMGSLLFAIIASMVA
                     WALIRNLPGLLEVLVLSRLNMRQGASYAITTILNYIIIAVGAMTVFGSLGVSWDKLQW
                     LAAALSVGLGFGLQEIFGNFVSGLIILFERPVRIGDTVTIGSFSGTVSKIRIRATTIT
                     DFDRKEVIIPNKAFVTERLINWSLTDTTTRLVIRLGVAYGSDLEKVRKVLLKAATEHP
                     RVMHEPMPEVFFTAFGASTLDHELRLYVRELRDRSRTVDELNRTIDQLCRENDINIAF
                     NQLEVHLHNEKGDEVTEVKRDYKGDDPTPAVG"
     gene            complement(11308..11469)
                     /gene="rsmS"
                     /locus_tag="JN001_001774"
     CDS             complement(11308..11469)
                     /gene="rsmS"
                     /locus_tag="JN001_001774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pleiotropic regulatory protein RsmS"
                     /protein_id="HAY9053032.1"
                     /translation="MSLENAPDDVKLAVDLIVLLEENQIPARTVLRALDIVKRDYEKK
                     LTRDDEAEK"
     gene            complement(11483..12010)
                     /gene="priC"
                     /locus_tag="JN001_001775"
     CDS             complement(11483..12010)
                     /gene="priC"
                     /locus_tag="JN001_001775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N''"
                     /protein_id="HAY9053033.1"
                     /translation="MKTALLLEKLEGQLATLRQRCAPVAQFATLSARFDRHLFQTRTT
                     TLQACLDEAGDNLAALRHAVEQQQLPQVAWLAEHLAAQLEAIAREASAWSLREWDSAP
                     PKIARWQRKRIQHQDFERRLREMVAERRARLARVTDLVEQQTLHREVEAYEARLARCR
                     HALEKIENRLARLTR"
     gene            12080..12457
                     /locus_tag="JN001_001776"
     CDS             12080..12457
                     /locus_tag="JN001_001776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF454 family protein"
                     /protein_id="HAY9053034.1"
                     /translation="MQRIILIIIGWLAVVLGTLGVVLPVLPTTPFILLAAWCFARSSP
                     RFHAWLLYRSWFGSYLRFWQKHHAMPRGVKPRAILLILLTFAISLWFVQMPWVRIMLL
                     VILACLLFYMWRIPVIDEKQEKH"
     gene            12610..13161
                     /gene="apt"
                     /locus_tag="JN001_001777"
     CDS             12610..13161
                     /gene="apt"
                     /locus_tag="JN001_001777"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HAY9053035.1"
                     /translation="MTATAQQLEYLKNSIKSIQDYPKPGILFRDVTSLLEDPKAYALS
                     IDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPRETISETYDL
                     EYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFD
                     LGGEQRLEKQGITSYSLVPFPGH"
     gene            13290..15161
                     /gene="dnaX"
                     /locus_tag="JN001_001778"
     CDS             13290..15161
                     /gene="dnaX"
                     /locus_tag="JN001_001778"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HAY9053036.1"
                     /translation="MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFS
                     GTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTKVE
                     DTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQ
                     KLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDAL
                     SLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVEANGERVMALINEAAARGI
                     EWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLI
                     GRKELPYAPDRRMGVEMTLLRALAFHPRMPLPEPEVPRQSFAPVAPTAVMTPTQVPPQ
                     PQSAPQQAPTVPLPETTSQVLAARQQLQRVQGATKAKKSEPAAATRARPVPSALEKAP
                     AKKEAYRWKATTPVMQQKEVVATPKALKKALEHEKTPELAAKLAAEAIERDPWAARVS
                     QLSLPKLVEQVALNAWKEESDNAVCLHLRSSQRHLNNRGAQQKLAEALSTLKGSTVEL
                     TIVEDDNPAVRTPLEWRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI"
     gene            15214..15543
                     /locus_tag="JN001_001779"
     CDS             15214..15543
                     /locus_tag="JN001_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001364632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HAY9053037.1"
                     /translation="MFGKGGLGNLMKQAQQMQEKMQKMQEEIAQLEVTGESGAGLVKV
                     TINGAHNCRRVEIDPSLLEDDKEMLEDLVAAAFNDAARRIEETQKEKMASVSSGMQLP
                     PGFKMPF"
     gene            15543..16148
                     /gene="recR"
                     /locus_tag="JN001_001780"
     CDS             15543..16148
                     /gene="recR"
                     /locus_tag="JN001_001780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HAY9053038.1"
                     /translation="MQTSPLLTQLMEALRCLSGVGPKSAQRMAFTLLQRDRSGGMRLA
                     QALTRAMSEIGHCADCRTFTEQEVCNICSNPRRQENGQICVVESPADIYAIEQTGQFS
                     GRYFVLMGHLSPLDGIGPDDIGLDRLEQRLAEEKITEVILATNPTVEGEATANYIAEL
                     CAQYDVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKIRF"
     gene            16258..18132
                     /gene="htpG"
                     /locus_tag="JN001_001781"
     CDS             16258..18132
                     /gene="htpG"
                     /locus_tag="JN001_001781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003903109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HAY9053039.1"
                     /translation="MKGQETRGFQSEVKQLLHLMIHSLYSNKEIFLRELISNASDAAD
                     KLRFRALSNPDLYEGDGELRVRVSFDKDKRTLTISDNGVGMTRDEVIDHLGTIAKSGT
                     KSFLESLGSDQAKDSQLIGQFGVGFYSAFIVADKVTVRTRAAGEKPENGVFWESAGEG
                     EYTVADITKEDRGTEITLHLREGEDEFLDDWRVRSIISKYSDHIALPVEIEKREEKDG
                     ETVISWEKINKAQALWTRNKSEITDEEYKEFYKHIAHDFNDPLTWSHNRVEGKQEYTS
                     LLYIPSQAPWDMWNRDHKHGLKLYVQRVFIMDDAEQFMPNYLRFVRGLIDSSDLPLNV
                     SREILQDSTVTRNLRNALTKRVLQMLEKLAKDDAEKYQTFWQQFGLVLKEGPAEDFAN
                     QEAIAKLLRFASTHTDSSAQTVSLEDYVSRMKEGQEKIYYITADSYAAAKSSPHLELL
                     RKKGIEVLLLSDRIDEWMMNYLTEFDGKPFQSVSKVDESLEKLADEVDESAKEAEKAL
                     TPFIDRVKALLGERVKDVRLTHRLTDTPAIVSTDADEMSTQMAKLFAAAGQKVPEVKY
                     IFELNPDHVLVKRAADTEDEAKFSEWVELLLDQALLAERGTLEDPNLFIRRMNQLLVS
                     "
     gene            18313..18957
                     /gene="adk"
                     /locus_tag="JN001_001782"
     CDS             18313..18957
                     /gene="adk"
                     /locus_tag="JN001_001782"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HAY9053040.1"
                     /translation="MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSE
                     LGKQAKDIMDAGKLVTDELVIALVKERIAQEDCRNGFLLDGFPRTIPQADAMKEAGIN
                     VDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQ
                     EETVRKRLVEYHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG"
     gene            19089..20051
                     /gene="hemH"
                     /locus_tag="JN001_001783"
     CDS             19089..20051
                     /gene="hemH"
                     /locus_tag="JN001_001783"
                     /EC_number="4.99.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HAY9053041.1"
                     /translation="MRQTKTGILLANLGTPDAPTPEAVKRYLKQFLSDRRVVDTSRLL
                     WWPLLRGVILPLRSPRVAKLYASVWMEGGSPLMVYSRQQQQALAQRLPETPVALGMSY
                     GSPSLESAVDELLAEHVDHIVVLPLYPQFSCSTVGAVWDELARILARKRSIPGISFIR
                     DYADNHDYINALANSVRASFAKHGEPDLLLLSYHGIPQRYADEGDDYPQRCRTTTCEL
                     ASALGMAPEKVMMTFQSRFGREPWLMPYTDETLKMLGEKGVGHIQVMCPGFAADCLET
                     LEEIAEQNREVFLGAGGKKYEYIPALNATPEYIEMMANLVAAYR"
     gene            complement(20048..21007)
                     /gene="aes"
                     /locus_tag="JN001_001784"
     CDS             complement(20048..21007)
                     /gene="aes"
                     /locus_tag="JN001_001784"
                     /EC_number="3.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl esterase"
                     /protein_id="HAY9053042.1"
                     /translation="MKPENKLPVLDLISAEMKTVVNTLQPDLPSWPATGTIAEQRQYY
                     TLERRFWNAGAPEMATRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDT
                     HDRIMRLLASYSQCTVIGIDYPLSPEARFPQAIEEIVAACCYFHQQAEDYQINMSRIG
                     FAGDSAGAMLALASALWLRDKQIDCGKIVGVLLWYGLYGLRDSVTRRLLGGVWDGLTQ
                     QDLQMYEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLA
                     AHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL"
     gene            21159..22463
                     /locus_tag="JN001_001785"
     CDS             21159..22463
                     /locus_tag="JN001_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015965517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inosine/guanosine kinase"
                     /protein_id="HAY9053043.1"
                     /translation="MKFPGKRKSKHYFPVNARDPLLQQFQPENETSAAWVVGIDQTLV
                     DIEAKVDDEFIERYGLSAGHSLVIEDDVAEALYQELKQKNLITHQFAGGTIGNTMHNY
                     SVLADDRSVLLGVMCSNIEIGSYAYRYLCNTSSRTDLNYLQGVDGPIGRCFTLIGESG
                     ERTFAISPGHMNQLRAESIPEDVIAGASALVLTSYLVRCKPGEPMPEATMKAIEYAKK
                     YNVPVVLTLGTKFVIAENPQWWQQFLKDHVSILAMNEDEAEALTGESDPLLASDKALD
                     WVDLVLCTAGPIGLYMAGFTEDEAKRKTQHPLLPGAIAEFNQYEFSRAMRHKDCQNPL
                     RVYSHIAPYMGGPEKIMNTNGAGDGALAALLHDITANSYHRSNVPNSSKHKFTWLTYS
                     SLAQVCKYANRVSYQVLNQHSPRLTRGLPEREDSLEESYWDR"
     gene            complement(22596..24272)
                     /locus_tag="JN001_001786"
     CDS             complement(22596..24272)
                     /locus_tag="JN001_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Kef family K(+) transporter"
                     /protein_id="HAY9053044.1"
                     /translation="MHHATPLITTIVGGLVLAFILGMLANKLRISPLVGYLLAGVLAG
                     PFTPGFVADTKLAPELAELGVILLMFGVGLHFSLKDLMAVKAIAIPGAIAQIAVATLL
                     GMALSAVLGWSLMTGIVFGLCLSTASTVVLLRALEERQLIDSQRGQIAIGWLIVEDLV
                     MVLTLVLLPAVAGMMEQGDVGFATLAVDMGITIGKVIAFIAIMMLVGRRLVPWIMARS
                     AATGSRELFTLSVLALALGIAFGAVELFDVSFALGAFFAGMVLNESELSHRAAHDTLP
                     LRDAFAVLFFVSVGMLFDPLILIQQPLAVLATLAIILFGKSLAAFFLVRLFGHSQRTA
                     LTIAASLAQIGEFAFILAGLGMALNLLPQAGQNLVLAGAILSIMLNPVLFALLEKYLA
                     KTETLEEQTLEEAIEEEKQIPVDICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR
                     TRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD
                     IEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLETPPAGEVVTG"
     gene            complement(24510..>24987)
                     /locus_tag="JN001_001787"
     CDS             complement(24510..>24987)
                     /locus_tag="JN001_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053045.1"
                     /translation="YYTFYLMQKFGLSIQNAQLHLFAFLFAVAAGTVIGGPVGDKIGR
                     KYVIWGSILGVAPFTLILPYASLHWTGVLTVIIGFILASAFSAILVYAQELLPGRIGM
                     VSGLFFGFAFGMGGLGAAVLGLIADHTSIELVYKICAFLPLLGMLTIFLPDNRHKD"
BASE COUNT         6250 a         6508 c         6411 g         5818 t
ORIGIN      
        1 gtcactctcg tctggggaat atctccccgg cagccttcag ggaaaaatat catcagatgg
       61 ctgcttaaaa aagaacaaat ggtagtgtcc gctattgcca gtacacctca cagcgcggca
      121 ggtacaaagc gcgtgttgta ccattcgccg ttatagcaaa cgcggaaatc cagcacgtcg
      181 atatcttcat agcggtagcg tgggtagaca tcgaaaaaga agaaaccatt aagcaggata
      241 aataatacaa ccagtagcca gacagagcct gacagcgttt cggactgcaa catcaccgcc
      301 agggtggcaa aaaaagcaac gtacataccg ataaacagcc ccggatgttt acggataaaa
      361 ctgatactaa agcggggttt gttgtcgcgt ttttcgcggg tattcagaga ctcaatcgtt
      421 tcggtcagca ggcgttgtat ttcggtcatc gtttgccttc gtggtatctg caactttcca
      481 gggaacaccc tattttaacg tgggaatagt agaggggaag taacagatct accacaattt
      541 tgcataacag ttgcgaaaaa ccgattacaa ttttttaatt attctggctg gattaccgcc
      601 cacgacaacg ttgtccggga caccttttgt gacaactgca cctgaagcta ccacgacgtt
      661 atcaccaatg gtcacaccag ggttaatgac cgcgcgtccg ccaatccaga cgttattacc
      721 gatggtgacg ggtttcccca gttcagcacc gctattacgt gctacagggt cgatgggatg
      781 tgttgccgtg tagatatgaa cgcctggtgc caacatacag ttatcaccga tgcgaatagg
      841 gcagacatca agcatcacgc aatcgaagtt ggcgaaaaaa ttattgccga gaaaaatgtt
      901 atagccataa tcacagcgaa acgttggctc aatataagcc tctgtcacct gaccgaataa
      961 atcagcgaga atttgctggc gtaatgtgtg ctcttccgcc agggaatgat tgtatcggtg
     1021 aataagctga cgagcgcgca ggcgatcgcg agataacgtc tcatctgccg agcgatacaa
     1081 ctcaccagca atcatctttt ctttttctgt gctcattact gacctccggt tgctgaaaat
     1141 gcggcaacac agtaagacga aaagtcagtg aacagaacgt tcccattaca tctgtgtgat
     1201 aaagatcaca tagggtatgt cttcatggtg aaaaagtata aaattcttaa taaacagccg
     1261 gttatagctc cgaaagcgaa ttatttatta gcgaataaat ttccatactg aggaagggat
     1321 cttgtcgtat agtttattca tggtcaattc ggcgaggcgg tgatctgcgg ctgagtaaaa
     1381 taccgccagt tcattatctg ataattcgta tttatttttc tcgataacac gctccagcgt
     1441 gtcaattgtc tggcaacgac gtaaacgcat taaataatcg gttttcgtta aaggtttttc
     1501 ggacatactt ctacccatgg ttgtaataat tctaacaaga taaactcgca ggattctctt
     1561 tcgtcgcatt gacaaaacaa cggaatagtc gattacctga cttccgccat ttctgaagat
     1621 cctgcatatt aataccataa ctactgaaca acataaaggt gtcatccaga tattcgtcga
     1681 tctgctcaat gagcttattg tcttcattat acttaatttt gtaattaagt gcgaaggtcg
     1741 caatatgctc aatcagttca ttcaactgga ggttgatcgc cgaggttggg tcgttaaccc
     1801 agccataatt gctttcttca aggtttgcaa ggcagtcatg atacagggtt tcacagagaa
     1861 acttaagctg tgcgatatca tgtcttttgg gtgagtattc atccataacg cgtccccttc
     1921 ttagcggttg aactaacgga cacctttcgg gatggaaaaa acttactgac ctggacttgc
     1981 cctctcgttt gttagcttaa ctataagcca ctctttgcag gtattcattg cattattacg
     2041 aaaaattaca attaggaagg aatcgggaca ggactcactt tttcatacta gcactaaccc
     2101 gcagcaggta aaagcagttt gctcgaactg ttcataacat ttcaggatta tcgccagatg
     2161 aaattggtga cactaatacc aggattgctc tgaatatgac gtaataaccg aggaatgaat
     2221 aaagaattac cgcaaataat taagaatagc ctctaaatga ttatggatta ttaaatctat
     2281 tagcgctact taatataaat taactaacaa tcagtatttt ttatgaattt tatccgtggt
     2341 taatactggt tttcgtatga gatcctgagt tggtggttca attactcctt aatgttcgta
     2401 ggttatgcat aaaaaaggcc gcttgcgcgg ccttagtgat tacacgttgt atcaatgatg
     2461 atcgacagta tggctgtgct cgatatcttc attcttgcgg ctaaagcggc ggcgaaccac
     2521 cacaaagaat accggaacga agaagattgc cagtaccgtt gcggtcacca tcccgcccat
     2581 tacaccggta cctactgcgt tctgcgcgcc ggaaccagca ccagtactga taaccagcgg
     2641 cataacgccg aggataaacg ccagcgaggt catcaggatc ggacgtaaac gcatccgcac
     2701 tgcatcaagc gtcgcttcaa tcagaccttt accttcttta tccatcaagt ctttggcgaa
     2761 ttcgacgata agtatcgcgt tcttcgccga caacccaatg gttgtgagca ggcctacttg
     2821 gaagtaaacg tcattggtca ggccacggaa ggtggcagcc agcaacgcac cgataacccc
     2881 cagcggaacg accagcataa cggagaacgg aatcgaccag ctctcgtaca gcgccgctag
     2941 acacaggaat acgacaatca acgaaatcgc gtacagtgaa ggtgcctggt tgccggagag
     3001 gcgttcctga taggacatcc ccgtccagtc atagccaaca ccggtaggca gtttgctcgc
     3061 cagttgttcc attagctcca ttgcttcacc ggtactttta cccggtgccg cctggcctaa
     3121 gatttccatg gatggcaggc cattgtaacg ttccagacgc ggcgaaccgt actcccaacg
     3181 agaagaggag aatgccgaga acggcaccat ctgaccatca gcagcacgaa cataccagtc
     3241 gccgatatca tccggcagca tacggtattt cgcttctgac atgacgtaaa ctttcttcac
     3301 acgaccgcgg tcgataaagt cgttcacata gctaccgccc catgcagcgc ccagagtggt
     3361 gttaatgtcg ttgatagaaa cacccagcgc ctgcgctttt tcctggtcga tatcaatctt
     3421 aaactgcggg gtatcttcca gaccgtttgg acgtacgctg gtcaacatat caggatgctt
     3481 tgctgcttct gcaagcagct ggttacgcgc ctgagtcagt ttttcgtgac caaggccagc
     3541 ctggtcaatc agctcaaagt caaagccggt tgcagtaccc agttccacga ttgcgggtag
     3601 gttaaaggcg aaaaccatcg catctttgat ttgcgagaaa gcgcgtgttg cacgcatggt
     3661 aatcgcttca actttgtttt cttcgcccgg acgatcggcc cagtccttca aggaaacgaa
     3721 cgcaataccg gtattctgac cacgtcccgc aaagccgaag ccgttaacgg cgaacaccga
     3781 ctcaacgttg ttcttttctt tggtcagata gtaatgcgtt acctcattga gcactttctg
     3841 cgtacgttcc tgcgttgcac ctgctggcag ctgaaccatg gtcataaata cgccctggtc
     3901 ctcatctggc aagaaggagc ttggcagacg cacgaacaga taggccatgc cgaccacgat
     3961 gatcagatac agcaccaggt aacgccccgt actgcgcaga ataccgccta cgctgtcggt
     4021 gtagtggtgc gtgctcttct cgaacatgcg gttaaaccag ccgaagaagc cttttttacc
     4081 ttccccgtga tcgcctttgg caatcggttt cagcatggtg gcacaaagag ccggagtcag
     4141 gatcaacgct accagtaccg acagcgccat tgctgaaaca atggtaatag agaactgacg
     4201 atagatagca ccagtagaac cgccaaagaa ggccatcggt acgaataccg ctgacagtac
     4261 catcgcgata ccgaccagag cgccctgaat ctgccccatc gacttacggg tagcttcttt
     4321 tggcggcaaa ccttcttccg ccataacacg ctccacgttt tctaccacaa cgatagcgtc
     4381 atccaccaac aagccgatgg cgagcaccat cccgaacatt gttagcgtgt ttatcgagaa
     4441 gccaaaggcg gcaaggacgg caaaggtccc gagcaatacc accggtacgg caatggtcgg
     4501 aatcaacgtc gcgcggaagt tctgcaggaa cagatacata accaggaaca cgaggatgat
     4561 cgcttcgacc agcgttttaa ccacttcgtg aatagagatt ttcacgaacg gcgtggtgtc
     4621 gtacgggtaa acaattttca gacccgacgg gaagaacggt tccatcttcg ccagttcagc
     4681 acggattgcc gcagcggtat ccagcgcatt tgcaccggtc gccagcttga tccccagacc
     4741 ggaagccggt tggccgttaa actctgcgat gatgtcgtag ttctcaccac ccagctcaat
     4801 cttcgccaca tcacgcagca ggacgcggga accatcctga ttcactttca gcaggatttt
     4861 gccgaactct tcagtagagg tcagacgcgt ctgagcaata atagaggcgt taagctgttg
     4921 gcctttcacc ggcggcgtac caccgagctg acccgccgca acctgggcgt tctgcgcttt
     4981 gatggcggta atgacatcaa ccggcgttag ctggaatttg ttcagctcat tcgggttcat
     5041 ccagatacgc atcgcgtact gtgaaccgaa caactgaaca tcacccacgc ccgacgtacg
     5101 gctgatggca tctttcatat tcgccgctac gtagtcagag atatcctcct gcgtcatggt
     5161 gccatcggtg ttgataacgc cgacaaccat caggaagctg ctggatgatt tctcaacgct
     5221 caccccttgc tgctgaactt cttgcggcag caacggcatc gccagctgca gtttgttctg
     5281 cacctgaacc tgcgcgatat ccgcatcagt accagactca aaggtcaggg tgatctgcac
     5341 ggtccccgtg gagtcactgt tagaggacat gtacatcagg ttatcgatac cgttcatatt
     5401 ctgttcgata acctgtgtca ccgtgtcctg cactgttttc gcatcagcgc cggggtagga
     5461 ggcggagatc gttactgccg gcggtgcaat cgtaggatat tgcgccaccg gcagtttgag
     5521 gatcgccagc ccccctgcca acatgatgat aatggcgatc acccacgcaa aaatcgggcg
     5581 atcgataaag aaattaggca tgtcttaacg gctcctgttt aagttaagac ttggactgtt
     5641 caggctgagc accgcttgcg gcttgctggt tattatcagc ggtaacttct tgtgctttta
     5701 cctggacacc aggacgcact ttctgcagcc cacttattac tacgcgatcg cctgctttca
     5761 gaccttctgt caccagccac ttatcgccaa tagcctggct tgcaacgatc ggacgggttt
     5821 ccactttgtc atccgcgcca actaccagta cggtggcatc accacgcggc gtacgggtta
     5881 cgccctgttg cgggactaaa atagcgtttg gattaagccc ttcttccaga cgtgcgcgca
     5941 cgaacatacc cggcagcaga gtgtgatccg ggttcgggaa gatagcgcgt agggtgatag
     6001 acccagtggt ctgatcaacg gtaacgtcag agaattccag cgtaccgtcc tgcgggaact
     6061 taatgccgtc actggtgatc agcgacactt tggctttgcc gttctcttgt ttcagcgtgc
     6121 cattcgccag ttcctgtttc aggcgcagga agtcgttgct ggactgggtc acatcaacgt
     6181 agatcggatc aagttgctgc acggttgcca gcgcagttgc ctgaccgttc tgtaccaatg
     6241 cgccttccgt cacgttcgac ttaccaatgc gaccgctaat cggagcggtg actttggtgt
     6301 aagccagatt gatccgcgca gtttcaacgg cagctttcgc cgcagttacc gcagcattcg
     6361 cctgttgcgc atcagccaga gcctgatcgt actcttgctt actgatgtac tgagtaccaa
     6421 gcagtttctg ataacgattc accgtcaatt gcgcgatatt ggctgcagcc tgggctttcg
     6481 ccagatcacc tttcgcactg tcgtatgtcg cctgataggt cgcaggatca atctgataga
     6541 gagagacacc agcttcgatg tcgctacctt ctttgaaatt acgcttcagg ataatcccgc
     6601 taacttgagg acgaacttct gcgatccggt aggcactggt gcgacccgga agctcggttg
     6661 tgatctgcag aggttcagtt ttgactgtta ctacgccaac ggcgggcatc tgctggccac
     6721 cttgttgggc ctgtttgttg tcacatcctg ttagggctaa gctgcctgag agcatcagaa
     6781 cgaccgccag aggcgtaaac cctctgtttt tgttcatatg taaacctcga gtgtccgatt
     6841 tcaaattggt caatggtcaa aagttaataa acccattgct gcgtttatat tatcgtcgtg
     6901 ctatggtaca tacattcaca aatgtatgta aatctaacgc ctgtaaattc acgaacatat
     6961 ggcacgaaaa accaaacaag aagcgcaaga aacgcgccaa cacatcctcg atgtggctct
     7021 acgtcttttc tcacagcagg gggtatcatc cacctcgctg ggtgagattg caaaagcagc
     7081 tggcgttacg cgcggtgcaa tctactggca ttttaaagac aagtcggatt tgttcagtga
     7141 gatctgggaa ctgtcagaat ccaatattgg tgaactagag cttgagtatc aggcaaaatt
     7201 ccctggcgat ccactctcag tattaagaga gatattaatt catgttcttg aatccacggt
     7261 gacagaagaa cgacgtcgat tattgatgga gattatattc cacaaatgcg aatttgtcgg
     7321 agaaatggct gttgtgcaac aggcacaacg taatctctgt ctggaaagtt atgaccgtat
     7381 agaacaaacg ttaaaacatt gtattgaagc gaaaatgttg cctgcggatt taatgacgcg
     7441 tcgggcagca attattatgc gcggctatat ttccggcctg atggaaaact ggctctttgc
     7501 cccgcaatct tttgatctta aaaaagaagc ccgcgattac gtcgccatct tactggagat
     7561 gtatctcctg tgccccacgc ttcgtaatcc tgccactaac gaataaccct gaatctgact
     7621 ccaggatttt tcctggacat tttcgtcgtt gctattctgg ttcactgcgt cgtgatattc
     7681 ttgcggtttg actttttcag gtcgttcttc aggttcagaa accttcattc atcatgacta
     7741 tgttccagta ttacaaacga tcacggcatt ttgttttttc agcatttatt gcttttgttt
     7801 ttgtcttgtt atgccagaac acggcgtttg cgcgggcgtc atcgaatggt gatctgccga
     7861 caaaagcgga cctgcaggcg caacttgact cactaaataa acaaaaagat ctttctgctc
     7921 aggacaaact ggagctgcag gatctgacag atacattagc caccctcgat aaaatcgatc
     7981 gcataaaaga agagacagtt cagctacggc aaaaagtcgc tgaagcgccg gaaaaaatgc
     8041 gccaggcgac cgcggcgtta acagcactta gcgatgtcga taacgacgaa gaaacgcgca
     8101 aaattctgag tacgctttcg ttgcgccagc tggaaactcg cgttgcccag gcgctggacg
     8161 atttgcaaaa cgcacaaaac gatctggcgt cttataacag ccagctggtt tcgttacaga
     8221 cgcagcccga acgcgtgcaa aatgcgatgt ataacgcttc gcagcagctg caacaaattc
     8281 gcagtcgtct ggatgggact gatgtcggcg agactgcctt acgtcccagc cagaaagtgt
     8341 taatgcaggc tcagcaggcg ttgctgaatg cggagattga ccagcagcgt aaaagcctgg
     8401 aagggaacac cgtcttgcag gataccttgc aaaagcaacg tgattacgtg acggcgaaca
     8461 gcgcccgtct ggagcaccag ttgcagctgt tgcaagaagc ggtaaacagc aagcgcctga
     8521 ctttaactga aaaaacggcg caggaagccg tctccccgga tgaagccgcg cgtattcagg
     8581 ctaatccgct ggtgaaacag gaactggaaa ttaaccagca gttaagtcag cgtctgatta
     8641 ccgcgactga aaacggtaat cagttgatgc agcaaaacat taaagtcaaa aactggctgg
     8701 agcgggcgct gcaatcggaa cgcaatatta aagagcagat tgccgtcctg aagggcagcc
     8761 tgctgttgtc tcgtatcctt taccagcaac aacaaacgct gccctcggcg gatgaactgg
     8821 aaaacatgac caaccgcatc gcggatttgc gtctcgaaca gtttgaagtt aaccagcagc
     8881 gtgatgcact cttccagagc gatgcgttcg tcaacaaact ggaagaaggt cacaccaacg
     8941 aagtcaacag cgaagttcac gatgcgttat tgcaagtggt tgatatgcgt cgcgaattgc
     9001 tggatcaact caacaaacag ttgggtaacc agctgatgat ggccattaac ctgcaaatca
     9061 accagcagca gttaatgagc gtatcgaaaa acctgaaatc catcctgact cagcaaatct
     9121 tttgggtgaa cagtaaccgt ccaatggact gggactggat caaagcgttc ccgcaaagcc
     9181 tgaaagatga atttaagtcg atgaaaatca cggtgaactg ggaaaaagcc tggcctgccg
     9241 tttttatcgc tttcctcgcc ggtttgccgc tgctgttgat tgtcgggctg atccactggc
     9301 gtctgggctg gctgaaagcg tatcaacaaa aactggcttc cgctgtgggt tccctgcgta
     9361 acgatagcca gctcaacaca ccaaaagcga tccttatcga cctgatccgc gcgctgccgg
     9421 tgtgcctgat tattctcgcg gttggcttga ttctgttgac catgcagctc aacatcagcg
     9481 aactgctatg gtcgttcagc aaaaaactgg cgattttctg gctggtgttt ggcctgtgct
     9541 ggaaggtact ggagaagaac ggcgttgccg tgcgtcactt cggcatgccg gaacagcaga
     9601 ccagccactg gcgtcggcaa attgtccgca tcagtctcgc attgctgcct atccatttct
     9661 ggtctgtggt ggcagaactt tccccgctgc atctgatgga tgatgtgctg gggcaagcga
     9721 tgattttctt caacctgctg ctgattgcct tcctggtatg gccaatgtgc cgcgaaagct
     9781 ggcgtgataa agagtcgcac accatgcgac tggtcaccat taccgtgctg tcgattatcc
     9841 cgattgcatt gatggtgctg actgccacgg gttatttcta caccacgctg cgcctctccg
     9901 ggcgttggat tgaaaccgtt tatctggtga tcatctggaa cttgctctac cagacggtat
     9961 tgcgcggctt aagcgtagcg gcgcggcgta tcgcctggcg tcgtgcgctg gcgcgtcggc
    10021 agaatctggt gaaagagggc gcagaaggtg ccgaaccgcc ggaagaaccc accattgcac
    10081 tggaacaggt taaccagcag acgctgcgta ttaccatgtt gctgatgttt gcgctgttcg
    10141 gtgtcatgtt ctgggcaatt tggtccgatt tgatcaccgt gttcagctat atcgacagca
    10201 ttacgctctg gcattacaac ggtactgaag ctggcgctgc ggtggtgaaa aacgtcacca
    10261 tgggcagtct gttgtttgcg attatcgcct caatggtggc ctgggcgttg attcgcaacc
    10321 tgcctggttt gctggaagtg ctggtgctct cgcgactgaa tatgcgccag ggcgcgtcgt
    10381 atgccattac taccatcctt aactacatca ttattgccgt tggtgcgatg acggtgttcg
    10441 gatcgctggg cgtctcttgg gataaactcc agtggctggc ggcagcatta tccgtaggtc
    10501 ttggttttgg tttacaagaa attttcggta acttcgtctc cggtttgatc attctgttcg
    10561 aacgtccggt gcgtattggc gatacggtaa ccattggtag cttctcgggg acggtaagta
    10621 agatccgtat tcgtgcgaca acgattaccg atttcgatcg caaagaagtg atcatcccga
    10681 acaaagcgtt tgttaccgag cgtctgatca actggtcgtt gactgacact actacgcgtc
    10741 tggtgatccg tctcggcgtg gcctatggct ccgatctgga aaaagtgcgt aaagtgttac
    10801 tgaaggcggc gactgagcac ccaagggtga tgcacgaacc aatgccggaa gtcttcttta
    10861 cggcgtttgg tgccagcacg ttggatcatg agctgcgtct gtatgtgcgt gaactgcgtg
    10921 accgtagtcg tactgtcgat gagctgaacc gtactatcga tcagctgtgc cgtgaaaacg
    10981 acatcaacat tgcctttaac cagcttgaag tgcatctgca caacgagaag ggcgatgagg
    11041 tgacggaagt aaaacgcgac tacaaaggcg atgacccgac gccagcggta gggtaataac
    11101 caaagggggc gacatttagt tgccccgaga ttactgacaa agtgcgcgtt gttcatgccg
    11161 gatgcggcgt gaccgcctta tccggcctac gaaaccgcaa gaattcaatg tattgcagga
    11221 gcggtgtagg cctgataagc gtagcgcatc aggcagtttt gcgtttgccc acaatcttag
    11281 gggacattta gcggccccat ttatttctca cttttccgcc tcatcatcgc gcgttaattt
    11341 cttttcataa tcgcgtttta caatatccag cgcgcgcagc acggtgcggg ctgggatctg
    11401 attttcttcc agcagcacaa tcaaatcgac agccagtttg acatcgtcag gggcattttc
    11461 cagtgacata ctctctccat tgctagcggg ttaagcgcgc tagcctgttt tcgatttttt
    11521 ccagcgcatg gcggcagcgt gccaggcgcg cttcataggc ttccacttca cgatgcagcg
    11581 tttgctgttc cacgagatcg gtcacccgcg ccaggcgggc tctgcgttcg gcaaccatct
    11641 cacgtagccg ccgctcaaaa tcctgatgct gaatacgttt acgctgccag cgggcaattt
    11701 tcggtggcgc actgtcccac tcgcgcaatg accaggcgga ggcttcacgc gcgatggctt
    11761 ccagttgtgc cgccagatgt tccgccagcc aggccacttg cggcagctgt tgctgctcaa
    11821 ctgcatgacg aagcgcagcc agattatcgc cagcctcatc gagacaagcc tgcagtgttg
    11881 tcgtacgggt ttgaaaaagg tgtctgtcaa aacgggcact tagcgtggca aattgcgcta
    11941 ccggggcaca acgctgacgc agcgtagcga gctgtccttc cagtttttcc agcagcaggg
    12001 cggttttcac gataagacct caatgaaaat gataattgtt atgctaaagt agccactctg
    12061 taagctgaca acactcaata tgcaacgaat cattttaatc atcattggct ggctggcggt
    12121 agtgctgggt acgctgggcg tggtattacc ggtattaccg acgacgccgt ttatcctgct
    12181 ggcggcctgg tgctttgccc gttcttcccc gcgctttcac gcctggttgc tgtaccgctc
    12241 atggtttggc agctatctac gtttctggca gaaacatcat gcgatgccgc gcggcgtcaa
    12301 accgcgggcg attttgctta ttttgctcac gtttgccatt tctctgtggt tcgtccagat
    12361 gccatgggtg cgcatcatgt tgctggtaat tctcgcctgt ttgcttttct atatgtggcg
    12421 aattccggtg attgatgaaa agcaagaaaa gcactgaagc acaacaatcg cagttgcaat
    12481 tattgcgtac agccagtaca ttctggcgtt ttcgagcaca ggcgcaggcg gtcaaaggtt
    12541 aaacaactgt tacttttgat acgtttaaaa cgcgccgtga gtaccaccgt aacaagcagg
    12601 catacactta tgaccgcgac tgcacagcag cttgagtatc tcaaaaatag catcaaaagc
    12661 attcaggact acccaaaacc cggcattctt ttccgcgatg tcaccagctt actggaagac
    12721 ccgaaagctt acgctctcag catcgacttg ctggttgagc gttacaaaaa tgcgggcatt
    12781 accaaagttg tcggcaccga agcgcgtggc ttcttgtttg gcgctccggt agctctgggt
    12841 ctgggcgttg gctttgtacc ggtccgtaaa ccgggcaaac tgccgcgtga aaccatcagt
    12901 gaaacttacg acctggaata cggcaccgat cagctggaga tccacgttga tgccatcaaa
    12961 ccgggcgaca aagttctggt ggtggacgat ctgctggcaa ccggcggcac tatcgaagcg
    13021 accgttaaac tgatccgtcg tctgggtggt gaagtggctg acgctgcgtt cattatcaac
    13081 ctgttcgatc tcggcggcga acagcgtctc gaaaaacagg gcattaccag ctacagcctt
    13141 gtcccgttcc cgggccatta attatcgcca gtcttgtgct gcccacgcta cggacagcac
    13201 aagatgtgca ttcagcctcg ccgttctgac ggggctgtgt tagcattacc ccttcgtgaa
    13261 tccaccttcc agcgtttcag agcctgccaa tgagttatca ggtcttagcc cgaaaatggc
    13321 gcccacaaac ctttgctgac gtcgtcggcc aggaacatgt gctgaccgca ctggcgaacg
    13381 gcttgtcgtt agggcgtatt catcatgctt atcttttttc cggtacccgt ggcgtcggaa
    13441 aaacctctat cgcccgactg ctggcgaagg ggctaaactg cgaaaccggc attaccgcga
    13501 cgccgtgcgg cgtgtgcgat aactgtcgtg aaatcgagca ggggcgcttt gtcgatctga
    13561 ttgaaatcga cgccgcctcg cgcaccaaag ttgaagatac ccgcgacctg ctggataacg
    13621 tccagtacgc tccggcgcgt ggtcgtttca aagtttatct gatcgacgaa gtgcatatgc
    13681 tgtcgcgcca cagctttaac gcactgttaa aaacccttga agagccgccg gagcacgtta
    13741 agtttctgct ggcgacgacc gatccacaga aattgccggt gacgattttg tcgcgctgtt
    13801 tgcaatttca tctcaaggcg ctggatgtcg agcaaattcg ccatcaactt gagcacatcc
    13861 tcaacgaaga acatatcgct cacgagccgc gggcgttgca attgctggcg cgcgccgctg
    13921 aaggcagcct gcgagatgcc ttaagtctga ccgaccaggc gattgccagc ggtgacggcc
    13981 aggtttcaac ccaggcagtc agtgcgatgc tgggtacgct tgatgacgat caggcgctgt
    14041 cgctggttga agcgatggtc gaggccaacg gcgagcgcgt aatggcgctg attaatgaag
    14101 ccgctgcccg tggtatcgag tgggaagcgt tgctggtgga aatgctcggc ctgttgcatc
    14161 gtattgcgat ggtacaactt tcgcctgctg cacttggcaa cgacatggcc gccattgagc
    14221 tgcggatgcg tgaactggcg cgcaccatac cgccgacgga tattcagctt tactatcaga
    14281 cgctgttgat tggtcgcaaa gaattaccgt atgcgccgga ccgccgcatg ggcgttgaga
    14341 tgacgctgct gcgcgcgctg gcgttccatc cacgtatgcc tctgcctgag ccagaagtgc
    14401 cgcgccagtc ctttgcaccc gtcgcgccaa cggcagtaat gacgccaacc caggtgccgc
    14461 cgcaaccgca atcagcgccg cagcaggcac cgactgtacc gctcccggaa accaccagcc
    14521 aggtgctggc ggcgcgccag cagttgcagc gcgtgcaggg agcaaccaaa gcaaaaaaga
    14581 gtgaaccggc agccgctacc cgcgcgcgtc cggtgccatc ggcgctggaa aaagcgccag
    14641 ccaaaaaaga agcgtatcgc tggaaggcga ccactccggt gatgcagcaa aaagaagtgg
    14701 tcgccacgcc gaaggcgctg aaaaaagcgc tggaacatga aaaaacgccg gaactggcgg
    14761 cgaagctagc ggcagaagcc attgagcgcg acccgtgggc ggcacgggtg agtcaacttt
    14821 cgctaccaaa actggtcgaa caggtggcct taaatgcctg gaaagaggag agcgacaacg
    14881 cagtatgtct gcatttgcgc tcctctcagc ggcatttgaa caaccgcggt gcacagcaaa
    14941 aactggctga agcgttgagc acgttaaaag gttcaacggt tgaactgact atcgttgaag
    15001 atgataatcc cgcggtgcgt acgccgctgg aatggcgtca ggcgatatac gaagaaaaac
    15061 ttgcgcaggc gcgcgagtcc attattgcgg ataataatat tcagaccctg cgtcggttct
    15121 tcgatgcgga gctggatgaa gaaagtatcc gccccatttg atcgtaagca cagcttacgt
    15181 tcgtcatcct taacgtgatt gagagagaaa cctatgtttg gtaaaggcgg tctgggtaac
    15241 ctgatgaagc aagcccagca gatgcaagaa aaaatgcaga aaatgcagga agagatcgcg
    15301 cagctggaag tcaccggcga atctggcgca ggtctggtaa aagtgaccat caacggtgca
    15361 cacaactgcc gtcgcgtaga gatcgacccg agcctgctgg aagacgacaa agagatgctg
    15421 gaagacctgg tggctgcagc attcaacgac gcagcacgtc gtattgaaga aacgcagaaa
    15481 gaaaaaatgg cctctgtatc ctccggaatg cagctgccgc ctggctttaa gatgccgttc
    15541 tgatgcaaac cagcccgctg ttaacacagc ttatggaagc actgcgctgt ctgtcgggcg
    15601 ttggcccgaa gtcggcgcag cgtatggcgt tcacgctgct tcagcgcgat cgtagcggcg
    15661 ggatgcgtct ggcgcaggcg ctcacccggg cgatgtcgga aatcggccac tgcgccgatt
    15721 gccgcacttt caccgaacag gaagtctgta acatctgttc gaatccgcgt cgtcaggaaa
    15781 acggtcaaat ctgtgtggtg gagagtccgg cggacatcta cgccattgag cagacggggc
    15841 agttttctgg tcgttatttt gtgttgatgg ggcatctgtc accgctggac ggcatcggtc
    15901 cggatgatat cgggcttgat cgtctggaac agcgtctggc agaggaaaaa atcactgaag
    15961 tgatcctcgc caccaatccc acggttgaag gtgaagctac cgctaactac attgccgagc
    16021 tttgcgcgca atatgacgtg gaagctagcc gaatcgctca tggcgtaccg gttggcggcg
    16081 aactggaaat ggtcgatggc accacgctgt cacactccct tgccgggcgt cataagattc
    16141 gtttttaagc aaacgagagc aggatcacct gctctcgctt gaaattattc tcccttgtcc
    16201 ccatctctcc ctcatcctgt ttttaacctt aaaatggcat tattgaggta gacctacatg
    16261 aaaggacaag aaactcgtgg ttttcagtca gaagtgaaac agcttctgca cctgatgatc
    16321 cattctctct attccaataa agaaatcttc ctgcgtgagc ttatctctaa cgcctccgat
    16381 gcggcggaca agctgcgttt ccgtgcgcta tctaacccgg acctgtacga aggtgatggc
    16441 gaactgcgcg ttcgtgtctc tttcgataaa gacaagcgca cgctgaccat ctccgataac
    16501 ggcgtgggga tgacccgcga cgaagtgatt gaccatctgg ggactatcgc taaatccggt
    16561 accaaatcat tcctcgaatc cctgggttct gaccaggcga aagacagcca gctgatcggt
    16621 cagtttggtg ttggtttcta ctctgcgttt atcgtggccg acaaagtgac tgtgcgtact
    16681 cgcgcggcag gcgaaaaacc agaaaacggc gtcttctggg aatcggctgg cgaaggtgaa
    16741 tataccgttg ccgacatcac caaagaagat cgtggtactg aaatcaccct gcatctgcgt
    16801 gaaggcgaag acgagttcct cgatgactgg cgcgtgcgtt ccatcatcag caaatactcc
    16861 gaccatatcg cgctgccggt agagatcgaa aaacgcgaag agaaagacgg cgaaaccgtt
    16921 atctcctggg agaaaatcaa caaagcgcag gcgctgtgga ctcgtaacaa gtcggaaatc
    16981 accgatgaag agtacaaaga gttctacaaa cacatcgccc acgactttaa tgatccgctg
    17041 acctggagcc acaaccgcgt tgaaggtaag caggagtaca ccagcctgct gtacatcccg
    17101 tcccaggctc cgtgggatat gtggaaccgt gatcataaac acggcctgaa actgtacgtc
    17161 cagcgtgtgt tcatcatgga cgacgcagaa cagttcatgc cgaactatct gcgcttcgtg
    17221 cgtggtctga ttgactccag cgatctgcca ctgaacgttt cccgtgaaat cctccaggac
    17281 agcacggtaa cgcgtaacct gcgcaatgcg ctgaccaagc gtgtgctgca aatgctggaa
    17341 aaactggcga aagacgacgc ggaaaaatac cagaccttct ggcaacagtt tggcctggta
    17401 ctgaaagaag gtccggcgga agatttcgct aaccaggaag cgatcgccaa actgctgcgt
    17461 tttgcttcta cccataccga ttcttctgcg cagaccgtat ctctggaaga ctacgtttcc
    17521 cgcatgaaag aagggcagga gaaaatctac tacatcaccg cagacagcta tgcggcagcg
    17581 aagagcagcc cgcacctgga actgctgcgt aagaaaggca tcgaagttct gctgctttcc
    17641 gaccgcatcg atgagtggat gatgaactat ctgactgagt tcgacggtaa accgttccag
    17701 tcggtgtcta aagttgacga gtcgctggaa aaactggctg acgaagttga tgagagcgcg
    17761 aaagaagcgg agaaagcact gactccgttc atcgaccgtg tgaaagcctt gctcggcgag
    17821 cgcgtgaaag atgtccgtct gactcaccgt ctgaccgata cgccagcgat cgtttcgacc
    17881 gacgcggacg aaatgagcac tcagatggcg aaactgttcg ctgcggcggg ccagaaagtg
    17941 ccagaagtga aatacatctt cgaactgaac ccggatcacg tactggtgaa acgtgcggca
    18001 gatactgaag atgaagcgaa gttcagcgag tgggtagaac tgctgctgga tcaggcgctg
    18061 ctggcagaac gcggcacgct ggaagatccg aacctgttta ttcgtcgtat gaaccagctg
    18121 ctggtttcct gatgtcatgc cggatgacct ttgtgtcatc cggcattttt cttttcatca
    18181 tctgcacttt ccgcaaatta tctcgccatt aaccgtttca gcctcaggtg cctttcttga
    18241 ggcaatcgcc tgttggtggt atcgtttatc gctttttcaa aaaattcgac acattttaag
    18301 gggattttcg caatgcgtat cattctgctt ggcgctccgg gcgcggggaa agggactcag
    18361 gctcagttca tcatggagaa atatggtatt ccgcaaatct ccactggcga tatgctgcgt
    18421 gctgcggtca aatctggctc cgagctgggt aaacaagcaa aagacattat ggatgctggc
    18481 aaactggtca ccgacgaact ggtgatcgcg ctggttaaag agcgcattgc tcaggaagac
    18541 tgccgtaatg gtttcctgtt ggacggcttc ccgcgtacca ttccgcaggc agacgcgatg
    18601 aaagaagcgg gcatcaatgt tgattacgtt ctggaattcg acgtaccgga cgaactgatt
    18661 gttgatcgta tcgtaggccg ccgcgttcat gcgccgtctg gtcgtgttta tcacgttaaa
    18721 ttcaatccgc cgaaagtaga aggcaaagac gacgttaccg gtgaagaact gactacccgt
    18781 aaagacgatc aggaagaaac cgtacgtaaa cgtctggttg aataccatca gatgactgca
    18841 ccgctgatcg gctactactc caaagaagcg gaagcgggta acaccaaata cgcgaaagtt
    18901 gacggcacca agccggttgc tgaagttcgc gctgatctgg aaaaaatcct cggctaatca
    18961 agccgcagca gatctgcttt cgggcaggtc tgctcatcca cctcaggcaa tacctctcac
    19021 agcaattagt tcttcttcct cacttttccg ctacaattat caacaagttg aatcgataag
    19081 aggcggtaat gcgtcagact aaaaccggta tcctgctggc aaacctgggt acgcccgatg
    19141 cccccacacc tgaagcggta aaacgctatc tgaaacaatt tttaagcgac agacgcgtgg
    19201 ttgatacctc acggttgtta tggtggccat tgctgcgcgg cgttattttg ccgctgcgct
    19261 cgccgcgtgt ggcgaagctg tatgcctctg tctggatgga aggtggctcg ccgctgatgg
    19321 tttacagccg ccagcaacag caggcgctgg cacaacgttt accggagacg cctgtagcgc
    19381 tgggaatgag ctacggctcg ccatcactgg aaagcgccgt cgatgaactc ctggcagagc
    19441 atgtagatca tattgtggtg ctgccgcttt atccgcaatt ctcctgttct acggtcggtg
    19501 cggtatggga tgaactggca cgcattctgg cgcgcaaacg tagcattccg gggatatcgt
    19561 ttattcgtga ttacgccgat aaccacgatt acattaatgc actggcgaac agcgtacgcg
    19621 cttcttttgc caaacatggc gaaccggatc tgctgctgct ctcttatcat ggcattcccc
    19681 agcgttatgc agatgaaggc gatgattacc cgcaacgttg ccgcacaacg acttgcgaac
    19741 tggcttccgc actggggatg gcaccggaaa aagtgatgat gacctttcag tcgcgctttg
    19801 gccgggaacc ctggctgatg ccttataccg acgaaacgct gaaaatgctc ggagaaaaag
    19861 gcgtaggtca tatacaggtg atgtgcccgg gctttgctgc ggattgtctg gagacgctgg
    19921 aagagattgc cgagcaaaac cgtgaggtct tcctcggtgc cggcgggaaa aaatatgaat
    19981 atattccagc gcttaatgcc acgccagaat atatcgaaat gatggctaat cttgttgccg
    20041 cgtatcgcta aagctgagcg gtaaagaact gagcgccgtc gcgaagagcc tcgtcggcgg
    20101 ttttcatcat tcgtgaataa tgcaaaaagg catgcagcgt acctgggtag agtttgaact
    20161 cacagggctg ctgatgcgcc gctaacgtct ggtaaagcag acggctgtca tccagcagcg
    20221 gatcgaactc cgccccggca ataaaacagg gcggaacttc gcgagtgaga tcattattaa
    20281 acagacagta atacggtgac tcgcggtccg cgtcgttgct taaatacgcc tcttcataca
    20341 tctgcaaatc ctgttgcgtt aagccatccc agacaccgcc caacagacga cgagtcacgg
    20401 aatcccgtaa tccgtaaagc ccataccaca gcaaaacacc cacaatttta ccgcaatcga
    20461 tctgtttatc acgcaaccac aacgcactgg cgagcgccag catggcacct gcggaatcac
    20521 cggcaaagcc aatgcgggac atattgattt gataatcctc cgcctgctgg tggaaataac
    20581 aacaagcagc cacaatttcc tctatcgctt gcggaaaacg cgcttcaggt gaaagggggt
    20641 aatcaatacc aatcaccgta cattggctgt agcttgccag caggcgcatg atgcgatcgt
    20701 gggtatcgag attgccgaga ataaaaccgc ctccatgcaa ataaaatagc gtcgccgggc
    20761 tatctggctg cggacaaaag agacgtgttt ccacctgccc atattttgtt ggaaccatgt
    20821 aagctctggt tgccatttct ggagcgcccg cattccagaa tcggcgctca agcgtgtaat
    20881 actgtcgttg ctcagcaatc gttcccgttg cgggccagga cggtaaatcc ggctgaagag
    20941 tattcacaac ggtcttcatt tcagcagaaa taaggtccag aacaggtagt ttgttttccg
    21001 gcttcataca aaaactcctt tcaaattacg tcattgtaag gaaccactgc catgaaaatg
    21061 cgatcccgcc tgctgatatt gaaactggct gcgtctcgcg cgctcccgtc agattgtgtt
    21121 aacattcgcc gctcagttaa ccacccgtaa aaacaaccat gaaatttccc ggtaaacgta
    21181 aatccaaaca ttacttccct gtaaatgcac gcgatccgct gcttcagcaa ttccagccag
    21241 aaaacgaaac cagcgccgcc tgggtcgtag gtattgacca gacgctggtc gatattgaag
    21301 cgaaagtgga tgatgaattc attgagcgtt atggattaag cgccgggcat tcactggtga
    21361 ttgaggatga cgtagccgaa gcgctttatc aggagctaaa acagaaaaac ctgattaccc
    21421 atcagtttgc gggtggcacc attggtaaca ccatgcacaa ctactcggtg ctcgcggacg
    21481 accgttcggt gctgctgggc gtcatgtgca gcaatattga aattggcagt tatgcctatc
    21541 gttacctgtg taacacttcc agccgtaccg atcttaacta tctacaaggc gtggatggcc
    21601 cgattggtcg ttgctttacg ctgattggcg agtccgggga acgtaccttt gctatcagtc
    21661 caggccacat gaaccagctg cgggctgaaa gcattccgga agatgtgatt gccggagcct
    21721 cggcactggt tctcacctct tatctggtgc gttgcaaacc gggtgaaccc atgccggaag
    21781 caaccatgaa agccattgag tacgcgaaga aatataacgt accggtggtg ctgacgctgg
    21841 gcaccaagtt tgtcattgcc gagaatccgc agtggtggca gcaattcctc aaagatcacg
    21901 tctctatcct tgcgatgaac gaagatgaag ccgaagcgtt gaccggagaa agcgatccgt
    21961 tgttggcatc tgacaaggcg ctagactggg tagatctggt gctgtgcacc gccgggccaa
    22021 tcggcttgta tatggcgggc tttaccgaag acgaagcgaa acgtaaaacc cagcatccgc
    22081 tgctgccggg cgctatagcg gaattcaacc agtatgagtt tagccgcgcc atgcgccaca
    22141 aggattgcca gaatccgctg cgtgtatatt cgcacattgc gccgtacatg ggcgggccgg
    22201 aaaaaatcat gaacactaat ggagcggggg atggcgcatt ggcagcgttg ctgcatgaca
    22261 ttaccgccaa cagctaccat cgtagcaacg taccaaactc cagcaaacat aaattcacct
    22321 ggttaactta ttcatcgtta gcgcaggtgt gtaaatatgc taaccgtgtg agctatcagg
    22381 tactgaacca gcattcacct cgtttaacgc gcggcttgcc ggagcgtgaa gacagcctgg
    22441 aagagtctta ctgggatcgt taagttatcg tcggttcgta ggccagataa ggcgttcacg
    22501 ccgcatctgg catttggctc tcgatgcctg atgcgacgct ggcgcgtctt atcatgccta
    22561 catatttttc atattttaca tccggcaacc accgtttacc ccgtcaccac ctcacccgcc
    22621 ggtggcgttt ccagcagttc cagcatggta cgggcgattt cacgctcgcc catcactacc
    22681 tgattcgcac cacgttcggt gatatacgcc acttcatcgt cataatgggc gcgggcaata
    22741 atctcaatat ccggattttt cgcgcgggca gatgccacaa tctcacccgc ttcataaccg
    22801 ttgggaatcg tcaggatcag ccattttgca cattccagat gcgccagttg cataatttct
    22861 tcgttcgccg cattgcccaa tactgcgcgg accccgcgct ctcgcagctc atcaacacgg
    22921 gttcgtgacg tctcaatcac caccagcgga atatcagagg cgagcaattt ctcccccagc
    22981 aggctgccta cacgaccgta acccaccagt agcgcatggt tgcaaatatc cactgggatc
    23041 tgcttctctt cttcgattgc ctcttccagc gtctgctctt ccagcgtttc ggtcttcgcc
    23101 agatatttct ccagtagtgc gaacagtacc gggttgagca taatcgacag gatcgcccct
    23161 gccagtacca ggttttgtcc ggcctgcggc agtaaattca atgccattcc cagtcccgcc
    23221 aggataaacg cgaactcacc aatctgcgcc aggctggcgg cgatggttaa tgccgtacgt
    23281 tgggagtgac caaacagtcg caccaggaaa aatgcggcta acgacttacc aaacagaata
    23341 atcgccagcg tcgccagcac tgccagcggt tgctgaatca gaattaacgg atcaaacaac
    23401 atcccgacgg agacaaaaaa cagcaccgca aacgcgtcgc gcaatggcag cgtatcgtgg
    23461 gcggcacggt gactcagttc agactcgttc agtaccatcc cggcaaagaa cgcaccgagt
    23521 gcaaaggaga catcaaacag ctctaccgca ccaaaggcaa tccctaacgc cagcgccagc
    23581 accgacaggg taaacagctc gcgagaaccg gttgccgcgc tgcgtgccat aatccacggc
    23641 accagacggc gacctaccag catcataatg gcgataaatg cgatcacttt gccgatggtg
    23701 atccccatat cgactgcaag agtggcaaag cccacatcgc cctgttccat cattcctgcc
    23761 actgcgggca gcaacaccag cgtcagaacc attaccaggt cttccacaat caaccaaccg
    23821 atggcgattt gcccacgctg actgtcaatt aattgccgtt cttcaagtgc gcgcagtaac
    23881 accacggtac tggcggtgga aagacataaa ccgaacacga taccggtcat taacgaccag
    23941 cccagcacgg cagagagcgc catacccagc agcgtcgcca cggctatctg ggcgatcgca
    24001 ccgggaatgg cgatggcctt taccgccatc aaatccttca gcgaaaagtg caaaccgacg
    24061 ccaaacatca acagaatgac gcccagttca gccagttccg gcgcaagctt ggtatcggca
    24121 acaaagcccg gagtgaatgg tcctgccagc acacccgcta acagatatcc caccagagga
    24181 gaaatacgta gtttattggc cagcatgccg aggataaagg cgagcacaag gccgccaaca
    24241 atggtggtga taagcggggt ggcgtgatgc attccgtctc cttttcctgg tggttattgt
    24301 ccatttttgg ccgggaaaac caaaattaca ggtaatagtt tatgacaatt tcattgatga
    24361 tgttcatgaa taattattga attttgcaga aaaatggaat tagctgcaaa aaaagcacgg
    24421 atcggaaaac agaaggcggt ttaacagagg aaaggcttat ggcgactgta aaacgatgca
    24481 gccaaagttt gcctttggct gcaatgaaat cagtctttat gccggttatc aggcaggaat
    24541 atggtcaaca tccccaatag tggcaggaaa gcacagattt tatagactaa ctcgatgctg
    24601 gtgtgatcgg cgataagccc cagaactgcc gctcccagac ctcccatgcc aaaagcaaaa
    24661 ccgaaaaaga gtccagaaac cataccgata cgtcccggaa gtagctcctg agcgtagacc
    24721 agaatggcag agaatgccga agcgaggata aatccaataa tcaccgttaa aacccccgtc
    24781 cagtgcaggc tggcgtaggg taaaatcagc gtaaacggcg caacgccgag gatagagccc
    24841 caaatcacat atttccgtcc aattttatcc cctacaggcc cgccgatcac cgtacctgcc
    24901 gcaacggcaa acaggaaggc aaacagatga agctgggcat tctggataga taatccgaat
    24961 ttttgcatca gataaaaggt gtaatag
//
LOCUS       DADMJE010000049        24739 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.050, whole genome shotgun sequence.
ACCESSION   DADMJE010000049 DADMJE010000000
VERSION     DADMJE010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24739)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24739)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24739
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.050"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(47..337)
                     /locus_tag="JN001_001788"
     CDS             complement(47..337)
                     /locus_tag="JN001_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9053046.1"
                     /translation="MKLKIVAVVVTGLLAANVAHAAEVYNKDGNKLDLYGKVTALRYF
                     TDDKRDDGDKTYARLGFKGETQINDQMIGFGHWEYDFKGYNDEANGSRGKNL"
     gene            complement(596..1477)
                     /gene="yddG"
                     /locus_tag="JN001_001789"
     CDS             complement(596..1477)
                     /gene="yddG"
                     /locus_tag="JN001_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415990.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid efflux DMT transporter YddG"
                     /protein_id="HAY9053047.1"
                     /translation="MTRQKATLIGLIAIVLWSTMVGLIRGVSEGLGPVGGAAAIYSLS
                     GLLLIFTVGFPRIRQIPKGYLLAGSLLFVSYEICLALSLGYAATRHQAIEAGMVNYLW
                     PSLTILFAILFNGQKTNWLIVPGLLLALVGVCWVLGGENGLHYDEIINNITTSPLSYF
                     LAFIGAFIWAAYCTVTNKYARGFNGITVFVLLTGASLWVYYFLTQQPEMVFSTPVMIK
                     LISAAFTLGFAYAAWNVGILHGNVTIMAVGSYFTPVLSSALAAVLLSAPLSFSFWQGA
                     LMVCGGSLLCWLATRRG"
     gene            1709..4756
                     /gene="fdnG"
                     /locus_tag="JN001_001790"
     CDS             1709..4756
                     /gene="fdnG"
                     /locus_tag="JN001_001790"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:2294..2296,aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY9053048.1"
                     /translation="MDVSRRQFFKICAGGMAGTTVAALGFAPKQALAQARNYKLLRAK
                     EIRNTCTYCSVGCGLLMYSLGDGAKNAREAIYHIEGDPDHPVSRGALCPKGAGLLDYV
                     NSENRLRYPEYRAPGSDKWQRISWEEAFSRIAKLMKADRDANFIEKNEQGVTVNRWLS
                     TGMLCASGASNETGMLTQKFARSLGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIAVDPRFTRTASVADIYAPIR
                     SGTDITFLSGVLRYLIENNKINAEYVKHYTNASLLVRDDFAFEDGLFSGYDAEKRQYD
                     KSSWNYQFDENGYAKRDETLTHPRCVWNLLKAHVSRYTPDVVENICGTPKADFLKVCE
                     VLASTSAPDRTTTFLYALGWTQHTVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSTSLPGYLTLPSEKQVDLQSYLEANTPKATLAGQVNYWSNYPKFFVSL
                     MKSFYGDAAQKENNWGYDWLPKWDQTYDVIKYFNMMDEGKVTGYFCQGFNPVASFPDK
                     NKVVSCLSKLKYMVVIDPLVTETSTFWQNHGESNDVDPASIQTEVFRLPSTCFAEEDG
                     SIANSGRWLQWHWKGQDAPGEARNDGEILAGIYHHLRELYQAEGGKGVEPLMKMSWNY
                     KQPHEPQSDEVAKENNGYALEDLYDANGVLIAKKGQLLSSFAHLRDDGTTASSCWIYT
                     GSWTEQGNQMANRDNSDPSGLGNTLGWAWAWPLNRRVLYNRASADINGKPWDPKRMLI
                     QWNGSKWTGNDIPDFGNAAPGTPTGPFIMQPEGMGRLFAINKMAEGPFPEHYEPIETP
                     LGTNPLHPNVVSNPVVRLYEQDALRMGKKEQFPYVGTTYRLTEHFHTWTKHALLNAIA
                     QPEQFVEISETLAAAKGINNGERVTVSSKRGFIRAVAVVTRRLKPLNVNGQQVETVGI
                     PIHWGFEGVARKGYIANTLTPNVGDANSQTPEYKAFLVNIEKA"
     gene            4769..5653
                     /gene="fdxH"
                     /locus_tag="JN001_001791"
     CDS             4769..5653
                     /gene="fdxH"
                     /locus_tag="JN001_001791"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY9053049.1"
                     /translation="MAMETQDIIKRSATNSITPPSQVRDYKAEVAKLIDVSTCIGCKA
                     CQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLEWLIRKDGCMH
                     CEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKC
                     TLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEHAGVYNPEG
                     VGGTHVMYVLHHADQPELYHGLPKDPKIDTSVSLWKGALKPLAAAGFIATFAGLIFHY
                     IGIGPNKEVDDDEEDHHE"
     gene            5646..6299
                     /gene="fdnI"
                     /locus_tag="JN001_001792"
     CDS             5646..6299
                     /gene="fdnI"
                     /locus_tag="JN001_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit gamma"
                     /protein_id="HAY9053050.1"
                     /translation="MSKSKMIVRTKFIDRVCHWTVVICFFLVALSGISFFFPTLQWLT
                     QTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNIVEVLKGNEHK
                     VADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFPMQVVRYSLLIHAAAGI
                     ILIHAILIHMYMAFWVKGSIKGMIEGKVSRRWAKKHHPRWYREIEKAEAKKESEEGI"
     gene            complement(6350..6634)
                     /locus_tag="JN001_001793"
     CDS             complement(6350..6634)
                     /locus_tag="JN001_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415994.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY9053051.1"
                     /translation="MKMANHPRPGDIIQESLDELNVSLREFARAMEIAPSTASRLLTG
                     KAALTPEMAIKLSVVIGSSPQMWLNLQNAWSLAEAEKTVDVSRLRRLVTQ"
     gene            complement(6780..7790)
                     /gene="adhP"
                     /locus_tag="JN001_001794"
                     /pseudo
     CDS             complement(6780..7790)
                     /gene="adhP"
                     /locus_tag="JN001_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415995.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase AdhP"
     gene            complement(7924..9621)
                     /locus_tag="JN001_001795"
     CDS             complement(7924..9621)
                     /locus_tag="JN001_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HAY9053052.1"
                     /translation="MEPKTKKQRSLYIPYAGPVLLEFPLLNKGSAFSMEERRNFNLLG
                     LLPEVVETIEEQAERAWIQYQGFKTEIDKHIYLRNIQDTNETLFYRLVNNHLDEMMPV
                     IYTPTVGAACERFSEIYRRSRGVFISYQNRHNMDDILQNVPNHNIKVIVVTDGERILG
                     LGDQGIGGMGIPIGKLSLYTACGGISPAYTLPVVLDVGTNNQQLLNDPLYMGWRNPRI
                     IDDEYYEFVDEFIQAVKQRWPDVLLQFEDFAQKNAMPLLNRYRNEICSFNDDIQGTAA
                     VTVGTLIAASRAAGGQLSEKKIVFLGAGSAGCGIAEMIIAQTQREGLSEEAARQKVFM
                     VDRFGLLTDKMPNLLPFQTKLVQKRENLSDWDTDSDVLSLLDVVRNVKPDILIGVSGQ
                     TGLFTEEIIREMHKHCPRPIVMPLSNPTSRVEATPQDIIAWTEGNALVATGSPFNPVV
                     WKDKIYPIAQCNNAFIFPGIGLGVIASGASRITDEMLMSASETLAQYSPLVLNGEGLV
                     LPELKDIQKVSRAIAFAVGKMAQQQGVAVKTSAEALQQAIDDNFWQAEYRDYRRTSI"
     gene            complement(9778..9915)
                     /gene="sra"
                     /locus_tag="JN001_001796"
     CDS             complement(9778..9915)
                     /gene="sra"
                     /locus_tag="JN001_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stationary-phase-induced ribosome-associated
                     protein"
                     /protein_id="HAY9053053.1"
                     /translation="MKSNRQARHILGLDHKISNQRKIVTEGDKSSVVNNPTGRKRPAE
                     K"
     gene            complement(10017..10232)
                     /gene="bdm"
                     /locus_tag="JN001_001797"
     CDS             complement(10017..10232)
                     /gene="bdm"
                     /locus_tag="JN001_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310112.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm-dependent modulation protein"
                     /protein_id="HAY9053054.1"
                     /translation="MFTYYQAENSTAEPALVNAIEQGLRAEHGVVTEDDILMELTKWV
                     EASDNDILSDIYQQTINYVVSGQHPTL"
     gene            10578..11009
                     /gene="osmC"
                     /locus_tag="JN001_001798"
     CDS             10578..11009
                     /gene="osmC"
                     /locus_tag="JN001_001798"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin OsmC"
                     /protein_id="HAY9053055.1"
                     /translation="MTIHKKGQAHWEGDIKRGKGTVSTESGVLNQQPYGFNTRFEGEK
                     GTNPEELIGAAHAACFSMALSFMLGEAGFTPTSIDTIADVSLDKVDAGFAITKIALKS
                     EVAVPGIDASTFDGIIQKAKAGCPVSQVLKAEITLDYQLKS"
     gene            complement(11065..11991)
                     /locus_tag="JN001_001799"
     CDS             complement(11065..11991)
                     /locus_tag="JN001_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY9053056.1"
                     /translation="MSDTLLTLRGVHINFPARKNWLGKTTEHVHAINGIDLQIRRGET
                     LGIVGESGCGKSTLAQLLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRI
                     ITEPLWIAKRSSEQQRRALVEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQ
                     PDVIVLDEPTSALDISVQAQILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYL
                     GQIVELGDAQQVLTAPAHPYTRLLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFF
                     YERCPLATSGCEVRQSLAIREDGRELRCWRAL"
     gene            complement(11984..12970)
                     /locus_tag="JN001_001800"
     CDS             complement(11984..12970)
                     /locus_tag="JN001_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9053057.1"
                     /translation="MTQPVLDIQQLHLSFPGFNGDVHALNNVSLQINRGEIVGLVGES
                     GSGKSVTAMLIMRLLPTGSYCVHRGQISLLGDDVLNAREKQLRQWRGARVAMIFQEPM
                     TALNPTRRIGLQMMDVIRHHQPISRREARAKAIVLLEEMQIPDAVEVMSRYPFELSGG
                     MRQRVMIALAFSCEPQLIIADEPTTALDVTVQLQVLRLLKHKARASGTAVLFISHDMA
                     VVSQLCDSVYVMYAGSVIESGVRADVIHHPRHPYTIGLLQCAPEHGVPRQLLPAIPGT
                     VPNLTHLPDGCAFRDRCYAAGAQCENVPALTACGDNNQRCACWYPQQEVISV"
     gene            complement(12967..13863)
                     /locus_tag="JN001_001801"
     CDS             complement(12967..13863)
                     /locus_tag="JN001_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D,D-dipeptide ABC transporter permease"
                     /protein_id="HAY9053058.1"
                     /translation="MMLSEETSAVRPQKQTRFNGAKLIWMLKGSPLTVTGAVIIVLML
                     LMMFFSPWLATHDPNAIDLTARLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLV
                     VVAIAGMIGSLLGCLSGVLGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAM
                     LAIAIVRIPFYVRLARGQALVVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQA
                     SLDIGSAILMAATLGFIGLGAQQPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAV
                     GFNLFGDGIRDLLDPKAGGKQS"
     gene            complement(13860..14882)
                     /locus_tag="JN001_001802"
     CDS             complement(13860..14882)
                     /locus_tag="JN001_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9053059.1"
                     /translation="MTFWSILRQRCWGLVLVMAGVCVITFIISHLIPGDPARLLAGDR
                     ASDAIVENIRQQLGLDQPLYVQFYRYVSDLFHGDLGTSIRTGRPVLEELRIFFPATLE
                     LAFCALLLALLIGIPLGILSAVWRNRWLDHLVRIMAITGISTPAFWLGLGVIVLFYGH
                     LQILPGGGRLDDWLDPPTHVTGFYLLDALLEGNGEVFFNALQHLILPALTLAFVHLGI
                     VARQIRSAMLEQLSEDYIRTARASGLPGWYIVLCYALPNALIPSITVLGLALGDLLYG
                     AVLTETVFAWPGMGAWVVTSIQALDFPAVMGFAVVVSFAYVLVNLVVDLLYLWIDPRI
                     GRGGGE"
     gene            complement(14884..16434)
                     /locus_tag="JN001_001803"
     CDS             complement(14884..16434)
                     /locus_tag="JN001_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY9053060.1"
                     /translation="MKRSIPFRPTLLALVLATTFPVAHAAVPKDMLVIGKAADPQTLA
                     PAVTIDNNDWTVTYPSYQRLVQYKTDGDKGSTDVEGDLASSWKASDDQKEWTFTLKDN
                     AKFADGTPVTAEAVKLSFERLLKIGQGPAEAFPKDLKIDAPDEHTVKFTLSQPFAPFL
                     YTLANDGASIINPAVLKEHAADDARGFLAQNTAGSGPFMLKSWQKGQQLVLVPNPHYP
                     GNKPNFKRVSVKIIGESASRRLQLSRGDIDIADALPVDQLNALKQENKVNVAEYPSLR
                     VTYLYLNNSKAPLNQADLRRAISWSTDYQGMVNGILSGNGKQMRGPIPEGMWGYDATA
                     MQYNHDETKAKAEWDKVTSKPTSLTFLYSDKDPNWEPIALATQSSLNKLGINVKLEKL
                     ANATMRDRVGKGDYDIAIGNWSPDFADPYMFMNYWFESDKKGLPGNRSFYENSEVDKL
                     LRNALATTDQTQRTRDYQQAQKIVIDDAAYVYLFQKNYQLAMNKEVKGFVFNPMLEQV
                     FNINTMSK"
     gene            complement(16448..17029)
                     /gene="ddpX"
                     /locus_tag="JN001_001804"
     CDS             complement(16448..17029)
                     /gene="ddpX"
                     /locus_tag="JN001_001804"
                     /EC_number="3.4.13.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine dipeptidase"
                     /protein_id="HAY9053061.1"
                     /translation="MSDTTELVDLAVIFPDLEIELKYACADNITGKAIYQQARCLLHK
                     DAITALAKSISIAQLSGLQLVIYDAYRPQQAQAMLWQACPDPQYVVDVTVGSNHSRGT
                     AIDLTLRDEHGNILDMGAGFDEMHERSHAYHPSVPPAAQRNRLLLNAIMTGGGFVGIS
                     SEWWHFELPQAASYPLLADQFTCFISPGTQHVS"
     gene            complement(17287..19686)
                     /gene="dosP"
                     /locus_tag="JN001_001805"
                     /gene_synonym="pdeO"
     CDS             complement(17287..19686)
                     /gene="dosP"
                     /locus_tag="JN001_001805"
                     /gene_synonym="pdeO"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416006.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-sensing cyclic-di-GMP phosphodiesterase"
                     /protein_id="HAY9053062.1"
                     /translation="MKLTDAENAADGIFFPALEQNMMGAVLINENDEVMFFNPAAEKL
                     WGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSRELQLEKKDGSKIW
                     TRFALSKVSAEGKVYYLALVRDASVEMAQKEQTRQLIIAVDHLDRPVIVLDPERHIVQ
                     CNRAFTEMFGYCISEASGMQPDTLLNIPEFPADNRIRLQQLLWKTARDQDEFLLLTRT
                     GEKIWIKASISPVYDVLAHLQNLVMTFSDITEERQIRQLEGNILAAMCSSPPFHEMGE
                     IICRNIESVLNESHVSLFALRNGMPIHWASSSHGAEVQNAQSWSATIRQRDGAPAGIL
                     QIKTSSGAETSAFIERVADISQHMAALALEQEKSRQHIEQLIQFDPMTGLPNRNNLHN
                     YLDDLVDKAVSPVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFRGKLKPDQYLCRI
                     EGTQFVLVSLENDVSNITQIADELRNVVSKPIMIDDKPFPLTLSIGISYDVGKNHDYL
                     LSTAHNAIDYIRKNGGNGWQFFSPAMNEMVKERLVLGAALKEAISNNQLKLVYQPQIF
                     AETGELYGIEALARWHDPQHGHVPPSRFIPLAEEIGEIENIGRWVIAEACRQLAEWRS
                     QNIHIPALSVNLSALHFRSNQLPNQVSDAMHAWGIDGHQLTVEITESMMMEHDTEIFK
                     RIQILRDMGVGLSVDDFGTGFSGLSRLVSLPVTEIKIDKSFVDRCLTEKRILALLEAI
                     TSIGQSLNLTVVAEGVETKEQFEMLRKIHCRVIQGYFFSRPLPAEEIPGWMSSVLPLK
                     I"
     gene            complement(19711..21092)
                     /gene="dosC"
                     /locus_tag="JN001_001806"
                     /pseudo
     CDS             complement(19711..21092)
                     /gene="dosC"
                     /locus_tag="JN001_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310122.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DosC"
     gene            complement(21464..22783)
                     /locus_tag="JN001_001807"
     CDS             complement(21464..22783)
                     /locus_tag="JN001_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 10 glycosylhydrolase"
                     /protein_id="HAY9053063.1"
                     /translation="MDICSRNKKLTIRRPAILVALALLLCSCKSTPPESMVTPPAGSK
                     PPATTQQSSQPMRGIWLATVSRLDWPPVSSVNISNPTSRARVQQQAMIDKLDHLQRLG
                     INTVFFQVKPDGTALWPSKILPWSDLMTGKIGENPGYDPLQFMLDEAHKRGMKVHAWF
                     NPYRVSVNTKPGTIRELNSTLSQQPASVYVQHRDWIRTSGDRFVLDPGIPEVQDWITS
                     IVAEVVSRYPVDGVQFDDYFYTESPGSRLNDNETYRKYGGAFASKADWRRNNTQQLIT
                     KVSHTIKSIKPGVEFGVSPAGVWRNRSHDPLGSDTRGAAAYDESYADTRRWVEQGLLD
                     YIAPQIYWPFSRSAARYDVLAKWWADVVKPTRTRLYIGIAFYKVGEPSKIEPDWMING
                     GVPELKKQLDLNDAVPEISGTILFREDYLNKPQTQQAVSYLQSRWGS"
     gene            complement(22914..24449)
                     /gene="gadC"
                     /locus_tag="JN001_001808"
     CDS             complement(22914..24449)
                     /gene="gadC"
                     /locus_tag="JN001_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance gamma-aminobutyrate antiporter
                     GadC"
                     /protein_id="HAY9053064.1"
                     /translation="MATSVQTGKAKQLTLLGFFAITASMVMAVYEYPTFATSGFSLVF
                     FLLLGGILWFIPVGLCAAEMATVDGWEEGGVFAWVSNTLGPRWGFAAISFGYLQIAIG
                     FIPMLYFVLGALSYILKWPALNEDPITKTIAALIILWALALTQFGGTKYTARIAKVGF
                     FAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVE
                     ASATHVNEMSNPGRDYPLAMLLLMVAAICLSSVGGLSIAMVIPGNEINLSAGVMQTFT
                     VLMSHVAPEIEWTVRVISALLLLGVLAEIASWIVGPSRGMYVTAQKNLLPAAFAKMNK
                     NGVPVTLVISQLVITSIALIILTNTGGGNNMSFLIALALTVVIYLCAYFMLFIGYIVL
                     VLKHPDLKRTFNIPGGKGVKLVVAIVGLLTSIMAFIVSFLPPDNIQGDSTDMYVELLV
                     VSFLVVLALPFILYAVHDRKGKANTGVTLEPINSQNAPKGHFFLHPRARSPHYIVMND
                     KKH"
BASE COUNT         6180 a         6228 c         6225 g         6106 t
ORIGIN      
        1 tgtaatataa ggtcagtgat catattgtga tgggcactta actcaatcag agattcttgc
       61 cgcgcgagcc gttggcttca tcgttatagc ctttaaaatc atattcccag tgaccaaaac
      121 caatcatttg atcattgatt tgcgtttctc ctttaaagcc gagacgggca taagttttat
      181 caccatcgtc acgcttatca tcagtaaaat aacgtagagc ggtaaccttg ccataaaggt
      241 cgagtttatt accatccttg ttatagactt cggcagcgtg tgctacgttc gcagctaaca
      301 aaccagttac aaccaccgca actattttta atttcattta acagaatcct tttaattatc
      361 gtcaaacgta ttttctaaac gaattttaaa cggcgtcatt tataaatgac atactgtttt
      421 taaaatagaa tggtgattaa aaacaatgag aaaaatagat gagataatat tatttatcga
      481 tatgtgatcg aagtcgaaat gagatataag gtgaattact ggtatttgaa atttattttt
      541 taatattgtc ggaatttatc tgattaactg ccgggccgta gacccggcaa ttattttaac
      601 cacgacgtgt cgccagccag cagagcaggg aaccgccgca gaccattagc gcgccttgcc
      661 agaatgagaa cgacagcggg gcgctgagca gcacggctgc aagcgctgag gaaagtacgg
      721 gcgtaaaata cgagcctacc gccattatgg tgacattgcc atgcaatata ccgacattcc
      781 atgcagcata agcaaatcct aaggtaaatg ccgcagagat gagtttaatc atgacgggcg
      841 tgctaaatac catttctggt tgttgcgtaa gaaaatagta aacccacaga cttgctcccg
      901 ttagcaggac aaaaacggta attccgttaa atccgcgtgc gtatttattc gttactgtgc
      961 aataggctgc ccagataaac gcaccaataa acgccaggaa ataactcaat gggctggtgg
     1021 tgatattatt gatgatttca tcataatgta acccattctc accgcctaac acccagcaga
     1081 cgccgaccag ggctaataat aatcctggta caatcagcca gttggttttc tgaccattaa
     1141 acagaatggc aaagagaatt gtcaggctgg gccacagata gttcaccata cccgcttcaa
     1201 tcgcctgatg acgggtcgcc gcatacccta aggaaagcgc cagacagatt tcatagctga
     1261 cgaataacag actcccggcg agtaaatagc ctttcggaat ctgccgaata cgcggaaatc
     1321 caaccgtgaa gattaacagc agcccgctta atgaatagat agcagctgcg ccgccgaccg
     1381 ggccgagccc ctcgctgaca ccgcgaatca atcctaccat cgtgctccac aggacgatcg
     1441 ctattagccc tatgagcgtt gctttttgtc gtgtcatgct cgctgttttg tctctcttgc
     1501 cgttaaaaat taagctgaat tttatagcat ttttttaact ggcctgtcag gcagtggtgc
     1561 gtttttctac cgctattgag gtaggtcaat ttgcgcaggc ggattatttt gtggcaaaca
     1621 cgtgttcttt ttgatttcgc gcaaaaagat tcagaatttt actgttagtt tcctcgcgca
     1681 gtaatatccc tgaaaaaaga ggaaagcaat ggacgtcagt cgcagacaat tttttaaaat
     1741 ctgcgcgggc ggtatggctg gaacaacggt agcggcattg ggctttgccc ctaagcaagc
     1801 actggctcag gcgcgaaact acaaattatt acgcgctaaa gagatccgta acacctgcac
     1861 atactgttcc gtaggttgcg ggctattgat gtatagcctg ggtgatggcg cgaaaaacgc
     1921 cagagaagcg atttatcaca ttgaaggtga cccggatcat ccggtaagcc gtggtgcgct
     1981 gtgcccaaaa ggggccggtt tgctggatta cgtcaacagc gaaaaccgtc tgcgctaccc
     2041 ggaatatcgt gcgccaggtt ctgacaaatg gcagcgcatt agctgggaag aagcattctc
     2101 ccgtattgca aagctgatga aagctgaccg tgacgctaac tttattgaaa agaacgagca
     2161 gggcgtaacg gtaaaccgtt ggctttctac cggtatgctg tgtgcctccg gtgccagcaa
     2221 cgaaaccggg atgctgacac agaaatttgc ccgctccctc gggatgctgg cggtagacaa
     2281 ccaggcgcgc gtctgacacg gaccaacggt agcaagtctt gctccaacat ttggtcgcgg
     2341 tgcgatgacc aaccactggg tggatatcaa aaacgctaac gtcgtaatgg taatgggcgg
     2401 taacgctgct gaagcgcatc ccgtcggttt ccgctgggcg atggaagcga aaaacaacaa
     2461 cgatgcaacc ttgatcgctg tcgatcctcg ttttacgcgt accgcttctg tggcggatat
     2521 ttacgcacct attcgttccg gtacggacat tacgttcctg tctggcgttt tgcgctacct
     2581 gatcgaaaac aacaaaatca acgccgaata cgttaaacat tacaccaacg ccagcctgct
     2641 ggtgcgtgat gattttgctt tcgaagacgg cctgttcagc ggctacgacg ctgaaaaacg
     2701 ccagtatgat aagtcgtcct ggaactatca gttcgatgaa aacggctatg caaaacgcga
     2761 tgaaacactg actcatccgc gctgtgtgtg gaacctgctg aaagcgcacg tttcccgcta
     2821 cacgccggac gtcgttgaaa acatctgcgg tacgccaaaa gccgacttcc tgaaagtgtg
     2881 tgaagtgctg gcctccacca gcgcaccgga tcgcacaacc accttcctgt acgcgctggg
     2941 ctggacgcag cacaccgtgg gtgcgcagaa catccgtact atggcgatga tccagttgct
     3001 gctcggtaac atgggtatgg ccggtggcgg cgtgaacgca ttgcgtggtc actccaacat
     3061 tcaggggctg actgacttag gtctgctctc taccagcctg ccaggttatc tgacgcttcc
     3121 gtcagaaaaa caggttgatt tgcagtcgta tctggaagcg aacacgccga aagcgacgct
     3181 ggctggtcag gtgaactact ggagcaacta tccgaagttc ttcgttagcc tgatgaaatc
     3241 tttctatggc gatgccgcgc agaaagagaa caactggggc tatgactggc tgccgaagtg
     3301 ggaccagacc tacgacgtca tcaagtattt caacatgatg gacgaaggca aagtcaccgg
     3361 ttatttctgc cagggcttta acccggttgc gtccttcccg gacaaaaaca aagtggtgag
     3421 ctgcctgagc aagctgaagt acatggtggt tatcgatccg ctggtgactg aaacctctac
     3481 cttctggcag aaccacggcg agtcgaacga tgtcgatccg gcgtctattc agactgaagt
     3541 attccgtctg ccttcgacct gctttgccga agaagatggt tctatcgcta actccggtcg
     3601 ctggttgcag tggcactgga aaggtcagga cgcgccgggc gaagcgcgta acgacggcga
     3661 aattctggcg ggtatctacc atcatctgcg cgagctgtac caggccgaag gtggtaaagg
     3721 cgtagaaccg ctgatgaaga tgagctggaa ctacaagcag ccgcacgaac cgcaatctga
     3781 cgaagtggct aaagagaaca acggctacgc gctggaagat ctctatgacg ctaatggcgt
     3841 gcttattgcg aagaaaggtc agttgctgag tagctttgcg catctgcgtg atgacggtac
     3901 aaccgcatct tcttgctgga tctacaccgg tagctggaca gagcagggca accagatggc
     3961 taaccgcgat aactccgacc cgtccggtct ggggaatacg ctgggatggg cctgggcgtg
     4021 gccgctcaac cgtcgcgtgc tgtacaaccg tgcttcggcg gatatcaacg gtaaaccgtg
     4081 ggatccgaaa cggatgctga tccagtggaa cggcagcaag tggacgggta acgatattcc
     4141 tgacttcggc aatgccgcac cgggtacgcc aaccgggccg tttatcatgc agccggaagg
     4201 gatgggacgc ctgtttgcca tcaacaaaat ggcggaaggt ccgttcccgg aacactacga
     4261 gccgattgaa acgccgctgg gcactaaccc gctgcatccg aacgtggtgt ctaacccggt
     4321 tgttcgtctg tatgaacaag acgcgctgcg gatgggtaaa aaagagcagt tcccgtatgt
     4381 gggtacgacc tatcgtctga ccgagcactt ccacacctgg accaagcacg cattgctcaa
     4441 cgcaattgct cagccggaac agtttgtgga aatcagcgaa acgctggcgg cggcgaaagg
     4501 cattaataat ggcgagcgtg tcactgtctc cagcaagcgt ggctttatcc gcgcggtggc
     4561 tgtggtaacg cgtcgtctga aaccgctgaa tgtaaatggt cagcaggttg aaacggtggg
     4621 tattccaatc cactggggct ttgagggtgt cgcgcgtaaa ggttatatcg ctaacactct
     4681 gacgccgaat gtcggtgatg caaactcgca aacgccggaa tataaagcgt tcttagtcaa
     4741 catcgagaag gcgtaagggg gcgaacagat ggctatggaa acgcaggaca ttatcaaaag
     4801 gtccgcaact aactccatca cgccgccttc tcaggtgcgt gattacaaag cagaagtcgc
     4861 aaaacttatc gacgtttcca cctgtatcgg ctgtaaagcc tgtcaggtgg cgtgttcgga
     4921 gtggaacgac atccgtgatg aagtggggca ctgcgtcggg gtttacgata accccgccga
     4981 tctgagcgcc aagtcctgga cggtgatgcg ctttagcgaa accgaacaga acggcaagct
     5041 ggagtggctg atccgtaaag acggctgtat gcactgtgaa gatcccggct gcctgaaggc
     5101 gtgcccgtct gctggtgcaa tcattcagta cgctaacggg attgtcgatt tccagtcgga
     5161 aaactgcatc ggctgtggtt actgcattgc cgggtgtccg tttaatattc cgcgcctcaa
     5221 caaagaggat aaccgggtat ataaatgcac gctctgcgtc gatcgcgtca gcgtcggcca
     5281 ggaaccggct tgtgtgaaaa cctgtccgac cggggctatc cacttcggca ccaagaagga
     5341 gatgctggag ctggcggaac agcgcgtggc gaaactgaaa gcgcgtggtt acgaacatgc
     5401 tggcgtctac aacccggaag gggtcggtgg tacgcacgtt atgtacgtgc tgcatcacgc
     5461 cgatcagccg gagctgtatc acggtctgcc gaaagatccg aagatcgaca cctcggtaag
     5521 cctgtggaaa ggcgcgttga aaccgctggc agcggctggc tttattgcca cttttgccgg
     5581 gttgattttc cactacatcg gtattggccc gaataaggaa gtggacgatg acgaggagga
     5641 tcatcatgag taagtcgaaa atgattgtgc gcaccaaatt tattgatcgc gtctgtcact
     5701 ggaccgtggt gatttgcttc ttcctggtgg cgctgtccgg gatttcgttc ttcttcccga
     5761 cgctgcaatg gctgacgcaa accttcggta cgccgcagat gggacgcatt ttgcacccgt
     5821 tcttcggcat tgcgattttc gtcgcgctga tgtttatgtt tgtgcgtttt gtgcatcaca
     5881 acatcccgga taagaaagat attccgtggc tattgaacat tgtcgaagta ttaaaaggca
     5941 atgagcacaa agtggcggat gttggtaagt acaacgccgg gcaaaagatg atgttctggt
     6001 cgatcatgag catgattttc gtgctgttgg tgaccggggt gattatctgg cgtccgtact
     6061 ttgcgcagta cttcccgatg caggttgttc gctacagcct gctgatccac gcggctgccg
     6121 gtatcatcct gatccacgcc atcctgatcc atatgtatat ggcattctgg gtgaaaggat
     6181 cgattaaagg gatgatcgaa gggaaggtaa gccgtcgctg ggcgaagaaa caccatccgc
     6241 gctggtatcg tgaaatcgag aaggcagaag cgaaaaaaga gagtgaagaa gggatataat
     6301 ctcttttgaa ctttaagctg aaaatggcgc tttaagaagc gccatttttt tattgcgtaa
     6361 ccagacggcg cagtcgcgac acatccaccg ttttttcagc ctctgccaga ctccaggcgt
     6421 tttgcagatt cagccacatt tgcggcgaac tgccgatcac cacggaaagt ttaattgcca
     6481 tttctggcgt caaagctgct tttccggtca gcaatcggct tgccgttgag ggcgcaattt
     6541 ccattgctct ggcaaactcg cgcaggctga cattaagttc gtccagtgat tcctgaataa
     6601 tgtcccccgg gcggggatga ttggccattt tcattagtgt ctttactctc agtagcgttc
     6661 cttctctggg aacactatca ttattgttcc ttcctacgca acaataatcc atttagccat
     6721 ttcatgttgg agagtgtgcg atgctgcgac ccgaacatgg gagtcgcagc aaagacctct
     6781 tagtgacgga aatcaatcac catacggcca cggattttgc cttcttccat ctcggtaaag
     6841 atggtgttga tgtccgctaa cggacgcagg gcgactttcg gcaccacttt gccttcggcg
     6901 gcaaactgga aggcttcggt tagatcctgg cgcgtgccga ccagcgaacc gaccacttca
     6961 atgccatcca gcacaagacg tgggatatcc aggctcatag actccggcgg cagaccgaca
     7021 gccacaacac gaccgcctgc acggacagca tcaactgccg agttaaacgc agctttagct
     7081 actgctgtta ccaccgcagc gtgagcgcca ccggttttct cctgcacaat ttaggcggcg
     7141 tcttcggtgc gtgagttaat cgctaaatct gcacccattt cggttgccag ttttaactgc
     7201 tcatcattga catcaatggc gatcactttg gcgttaaaga cattcttcgc gtattgcagg
     7261 gcgaggttac ccagaccgcc aagaccgtag atagcaatcc actgaccggg acgaattttt
     7321 gacagtttaa cggctttgta ggtggtgacc cccgcacagg taatgctgct ggccgccgcc
     7381 gagtccagac catctggcac ttttaccgcg taatcggcga ccacgatgca ctcttccgcc
     7441 atcccgccat caacgctgta tccggcattt ttaactgaac ggcagagcgt ttcgttacca
     7501 ctgttacagt attcgcaatg accgcatcct tcgtaaaacc acgccacgct ggcacgatcg
     7561 cctggtttta atgaggtgac acctgggcca acttctgcca ccacaccgat gccttcatgg
     7621 cccagaatta ccccagtttt gtcaccaaaa tcgccattct taacatgaag atcggtatga
     7681 catacaccac aacactccat tttcagcagg gcttcgccat gtttcagtga gcgcagtgtt
     7741 ttatccgtaa cgtcaacatg atgatccttc gtaacaactg cagccttcat agttcctcct
     7801 tttcggatga tgttctgcat agcaggtgag gcaaatgaga tttattcgcc actacccagt
     7861 atggatgaga tctgaaaaag ggagagggaa atagcccggt agccttcact accgggcgca
     7921 ggcttagatg gaggtacggc ggtagtcgcg gtattcggct tgccagaaat tatcgtcaat
     7981 ggcttgttgc aaagcttcag cagacgtttt caccgccacg ccttgctgct gcgccatttt
     8041 gccaaccgca aacgcaattg cgcgggagac tttctgaata tctttcagtt ccggtagtac
     8101 cagaccttcg ccgttcagca ccagcggcga atactgagca agcgtttcac ttgctgacat
     8161 cagcatctca tcggtgatac gtgacgcgcc ggaagcaata acacccagcc cgatgccagg
     8221 gaaaataaag gcgttgttac actgggcgat agggtagatt ttatctttcc ataccactgg
     8281 attaaacggg ctgccagtgg cgaccagcgc gttaccttcg gtccaggcga taatgtcctg
     8341 cggtgtggct tccacgcgtg acgtcgggtt agacagcggc atcacgatcg gacgcggaca
     8401 gtgtttatgc atctcacgga tgatctcttc cgtaaacagc ccggtctgtc ctgagacgcc
     8461 aatcagaata tctggtttta cattgcgcac cacatccagc agtgacagca catcgctgtc
     8521 ggtatcccag tcactgaggt tttcgcgttt ctgcaccagt ttggtctgga aaggcagcag
     8581 gttcggcatc ttgtccgtca gcaggccaaa gcgatcgacc ataaagactt tctgccgcgc
     8641 cgcttcctcg cttaatcctt cgcgctgggt ctgggcgatg atcatttcgg caatgccgca
     8701 tcccgctgaa cctgcaccaa ggaagacgat ttttttctcg cttaactgac cacctgccgc
     8761 tcggcttgct gcgatcagtg tgccgactgt taccgccgca gtgccctgaa tgtcatcgtt
     8821 aaaagaacaa atttcattgc gatagcggtt aagtaacggc atcgcatttt tttgagcaaa
     8881 gtcttcaaac tgcaacagca cgtctggcca gcgttgtttc acagcctgga taaattcatc
     8941 aacgaattca tagtattcgt cgtcaatgat acgcggatta cgccagccca tatacagcgg
     9001 atcgttaagc agctgttggt tgttcgttcc gacatccagc accaccggaa gggtatacgc
     9061 cgggctgatg ccgccacagg cggtatagag cgacagttta ccgatcggaa tgcccatccc
     9121 gccgatgccc tggtcaccaa gccccagaat acgttcaccg tcagtcacca caatcacttt
     9181 gatattatgg ttcggtacgt tttgcagaat atcgtccata ttgtggcggt tctggtaaga
     9241 gataaacacg ccgcgtgaac ggcggtagat ctcagaaaaa cgctcacagg ctgcgccgac
     9301 ggttggggta taaataacag gcatcatctc atcaagatga ttgtttacca gacggtagaa
     9361 gagggtttcg ttggtgtcct ggatgttacg caggtagatg tgtttgtcga tttcggtttt
     9421 gaatccctga tactggatcc atgctcgttc cgcttgttct tcgatggttt cgaccacttc
     9481 cggcagtaac cccagcaggt tgaagttacg gcgttcttcc atgctgaagg cactgccttt
     9541 attcaacaac ggaaattcca gcagtacagg gccagcgtaa gggatataaa gcgaacgctg
     9601 tttttttgtt tttggttcca tgtcactcac tcttttttga atatccatcc ctggcacgct
     9661 tttatcgtct ttgctttacc gccagggcgt cggccccaag tataaagcag ataaaaacaa
     9721 aaacaccatt gcgcaggcaa tggtgtttaa tcgtcattga ggactgatgg ttatgaatta
     9781 cttttcagcg gggcgttttc tgccggttgg gttatttacc acgctggatt tgtcaccttc
     9841 ggtaactatt ttgcgctggt tagaaatttt atggtccagt ccaagaatat gacgtgcctg
     9901 acggttcgat ttcattttaa ctcctcaatc ctgttgctag ttttaaggac aacatcgccg
     9961 tagcgaagaa acacgtgcta aacccctaaa ttaggttgcc gatcaagcat agcaccttaa
    10021 agcgtagggt gctggccact gaccacataa ttgatcgttt gctggtagat atcactgagg
    10081 atgtcgttat cagaagcttc cacccatttg gtcagctcca tgagaatgtc atcttcagtg
    10141 acaacaccgt gctctgcccg aaggccttgc tcaatggcat taaccagagc gggttctgct
    10201 gttgaatttt ctgcctgata ataagtaaac atagtgattc tccgtgtctg tgtatttatg
    10261 gtgtttgcta cggatcgcag atttataaag cacattcagc atggcaaata tttgccgctt
    10321 tgttgttaag attagtcctt gttgatgatt tttatatttt aacctcatga tattgatagg
    10381 tattattatt gtggtgagtt gattaatatt aatgcaatat ctcttgggtt atatattccc
    10441 ggttatctat tgtggaaatt taatttaagt gcagaagtaa tatttctgcc ggatttttat
    10501 tcggaatatc ctgcttatcc tcgtgctgtt tctcacgtag tctataattt cctttttaag
    10561 cccacatgag agcaacaatg acaatccata agaaaggtca ggcacactgg gaaggcgata
    10621 tcaaacgcgg gaagggaaca gtatccaccg agagtggcgt gctgaaccaa cagccgtatg
    10681 gatttaacac gcgttttgaa ggcgaaaaag gaactaaccc tgaagaactg attggcgcag
    10741 cgcatgccgc atgtttctca atggcgcttt cattcatgct gggggaagcg ggatttacgc
    10801 caacatcgat tgataccatc gccgatgtgt cgctggataa agtggatgcc ggttttgcga
    10861 ttacgaaaat cgcactgaag agtgaagttg cggtgccggg tattgatgcc tctacctttg
    10921 acggcatcat ccagaaagca aaagcaggat gcccggtctc tcaggtactg aaagcggaaa
    10981 ttacgctgga ttaccagttg aaatcgtaaa gcattgccgg atgacgtgtc aggcgcgtga
    11041 atgcctgatg cgttgttagc atctctacag cgcccgccag caccggagct cacgtccgtc
    11101 ctcccttatt gctaatgatt gccggacttc acatccgctg gttgcaaggg ggcaacgttc
    11161 gtagaaaaaa cagccttgcg gcaacgtgcg gtttcccggc agatccgttt tacgtaatgc
    11221 ccattcttcc tccagcggtt tatcaatggc ggggagggaa tccagcaata atcgggtgta
    11281 tggatgtgcc ggagccgtta gcacctgttg cgcgtcgccc agttctacaa tctgcccgag
    11341 atacatcacc gccacccgat cgctcatatg acgtatcacc gagacattgt gtgaaatcag
    11401 cacataggtc agcccgtgat tttcctgtag cgttaccagt aaattgagga tctgcgcctg
    11461 cacggagata tccagcgcag aggttggctc atcaagcaca atcacgtcag gctgcgaaga
    11521 gagtgctctg gcaatggcga tacgttgccg ctgcccgccg gagaacgcat gaggcaggcg
    11581 gtcgagatac tccggacgaa tacccacctg cacagccagc tcctctacca acgctcgccg
    11641 ctgttgttca ctactacgct tagctatcca gagcggttct gtgatgatgc gccacaccgg
    11701 taagcgcgga ttgagcgaag agagcgggtc ctgaaacacc atctgcataa tgcgttgtga
    11761 gccagaacgg atgtactgcc cgtggctcgg ttgcagcata cccattaaaa gctgtgcgag
    11821 ggtgcttttg ccgcagcctg actcgccgac gatccctaag gtttcaccac ggcggatctg
    11881 taaatcaata ccattaatcg catgaacatg ttccgtagtt ttaccaagcc agtttttacg
    11941 ggccgggaaa ttgatatgga cgccgcgtaa cgttaataac gtgtcagaca cttatgacct
    12001 cctgctgcgg ataccaacag gcgcagcgct ggttgttgtc accacacgct gtcagcgccg
    12061 ggacgttttc acactgtgca cctgccgcat agcaacgatc gcgaaaagcg cagccgtcag
    12121 gcaaatgggt gaggtttggt accgtccctg gaatggcggg taatagctgg cgtggtactc
    12181 catgttctgg tgcacattgg agcaaaccaa tggtatacgg atgccgggga tgatggataa
    12241 cgtctgccct cacgccgctt tcaattacgc ttccggcata catcacgtaa acgctatcgc
    12301 acagttgcga caccacggcc atatcatggc tgatgaacag aaccgcagtt ccactggcgc
    12361 gggctttatg tttaagcaaa cgcagtacct gcaactgcac cgtgacgtcc agcgccgtag
    12421 tcggttcgtc ggcaataatc aattgcggct cgcaggagaa tgccagcgca atcattaccc
    12481 gctggcgcat accacctgaa agctcaaacg gatagcgcga cataacttcc acggcatccg
    12541 ggatttgcat ctcttccagc aggacaatcg ctttagctct ggcttcccga cgacttattg
    12601 gttgatgatg gcggatcacg tccatcatct gaagacctat tcgacgtgtc ggattgaggg
    12661 cggtcatcgg ttcctgaaag atcatcgcca ctcgtgcgcc gcgccactga cgaagctgtt
    12721 tttcccgagc gttaagaaca tcgtctccca gcagtgaaat ctgcccccga tgtacgcaat
    12781 aactgcccgt cggtagcaga cgcataatca gcattgcggt gactgattta cctgagccgg
    12841 attctcccac cagaccgaca atttcaccgc ggttaatctg caaggacaca ttgttgagcg
    12901 cgtgaacatc accgttaaaa ccggggaaac tcaaatgcag ctgttgaatg tccagaacgg
    12961 gctgggtcat gactgctttc ctcctgcttt cgggtcaagc agatcgcgaa taccatcacc
    13021 aaagagatta aacccaacgg cggtaagcaa aatcgctgcc cctggaaatg cgcaatacca
    13081 ccactgatcg agtacatagt tgcgaccatt cgctaccatc gcgccccatt cagcactcgg
    13141 ttgttgagca cccaggccaa taaatcccaa cgtggcggcc attaaaatcg cgctaccgat
    13201 atccagcgat gcctgcacga tcagcggcgg cagggagtta cgtaaaatat gccagctgat
    13261 cagatgccaa cgcgacgcac caaaggtttt cgccgcctga acataggtat actggcgtac
    13321 aactaatgct tgcccccgcg ccaggcgcac ataaaaggga attcgcacaa tagcaatcgc
    13381 cagcatggcg ttaaataaac tcggcccgag agcggcagcc agtgccattg tcagtaccaa
    13441 cgaaggaatc gacagcataa tgtccatgat gcgcatgatg atggcgtctg cgcgtccgcc
    13501 aagcacaccg gatagacatc cgagtagcga accaatcata cccgcaatgg caaccacgac
    13561 taatccggcg agaattgatt gctgactgcc gaccagtacg cggctgaaca gatcgcgtcc
    13621 cacttcatcg gtgccaaacc agtgcgccgc agaaggcggc aaaaggcggg cggttaaatc
    13681 aatggcgttg ggatcatgcg tcgcaagcca cggtgaaaaa aacatcatca atagcattaa
    13741 tacaatgatg actgcgccgg tcacggtgag cggactgcct ttcagcatcc atatcagttt
    13801 tgcaccgtta aatcgcgttt gtttttgtgg gcgtacggcg gacgtttcct cgcttagcat
    13861 cattcaccac ctccacgtcc gatacgcgga tcaatccaca aatagagcaa atccaccacc
    13921 aggttgacca gcacataagc aaatgaaacc acgacggcaa agcccatcac tgccgggaag
    13981 tcgagcgcct gtattgatgt tactacccat gcacccattc cgggccaggc aaaaacggtt
    14041 tcggtgagca ctgcgccata caacaaatcg cccagcgcca gacccaatac ggtaatcgat
    14101 gggatcaacg cattgggtag cgcataacat aaaacgatat accagccggg caagccgctg
    14161 gcccgggcgg tacgaatgta gtcttcactc aattgttcca gcatcgctga gcggatctgg
    14221 cgagcgacaa ttcccaggtg aacgaacgcc agcgttaatg ccggtaagat gagatgttgc
    14281 aacgcattga agaagacttc accgttgcct tcaagcagcg catcgagcag ataaaagccg
    14341 gtaacgtgcg ttggtggatc cagccagtca tcaagccttc cgccgccggg aagaatttgc
    14401 agatgaccat aaaacagcac aatgacgccc agtccaagcc aaaacgcagg tgtggagatt
    14461 ccggtaatgg ccattattcg caccagatga tccagccagc gatttcgcca gactgcagag
    14521 agtatgccca gcgggatgcc aatcaggagt gccagcagca gggcacaaaa agccagttcc
    14581 agcgtcgccg ggaaaaatat acgcaactct tccaacaccg gacgcccggt acgaatggat
    14641 gttcccaggt caccatgaaa caggtcgctg acgtagcggt aaaactgtac atacagtggc
    14701 tggtccagtc ccagttgctg gcgaatattt tccacgatag catcgctggc gcggtcaccc
    14761 gccagtaacc gcgccggatc gccagggatc agatgcgaga taataaacgt aatcacgcag
    14821 acgcccgcca tcacgagcac cagcccccag cagcgttggc gtaaaatact ccagaaggtc
    14881 acgttattta ctcatggtat tgatattgaa gacctgttcc agcatgggat tgaacacaaa
    14941 gcctttcacc tctttgttca tcgccagttg gtagtttttc tggaacaggt acacataagc
    15001 agcgtcatca atgacgattt tctgtgcctg ctggtagtcc cgggtacgct gcgtctggtc
    15061 ggtggtcgca agcgcattgc gcagtaactt atcgacctca ctgttttcat agaacgagcg
    15121 gttacccggc agaccttttt tgtctgactc aaaccagtaa ttcataaaca tatacgggtc
    15181 ggcaaaatcc ggactccagt tgccaatcgc aatgtcgtaa tcacctttac ccactctgtc
    15241 gcgcatggtg gcgttcgcca gcttttccag cttcacattg atgcccagct tgttgagact
    15301 ggattgtgtc gccagagcaa taggctccca gttcggatcc ttatcggagt agagaaacgt
    15361 caggctggtg ggtttgctcg tcactttatc ccattcggct ttggctttcg tttcgtcatg
    15421 gttgtattgc attgccgtcg catcgtagcc ccacatgcct tccggaatcg ggccgcgcat
    15481 ctgttttccg ttaccactca gaatgccgtt aaccatgccc tgataatcgg tagaccagga
    15541 aatggcccga cgcagatccg cctgattaag aggcgctttg ctgttattca gatacaggta
    15601 ggtgacgcgc agtgacggat actctgccac attgactttg ttttcctgct tcagggcgtt
    15661 gagttgatcc accggcagcg catcggcaat gtcaatatca ccacgggaga gctgcaggcg
    15721 acgggaggca ctttcaccaa taatttttac cgatactcgc ttaaagttcg gtttattgcc
    15781 agggtaatgc ggatttggca ccagaactaa ttgctgacct ttttgccagc ttttcagcat
    15841 aaatggtccg gaaccggcgg tattttgcgc gaggaagccg cgggcatcat ccgctgcatg
    15901 ttcctttaac accgccggat tgataatgga tgcaccgtca ttcgccagcg tgtagaggaa
    15961 cggtgcgaat ggctggctaa gggtaaactt caccgtatgt tcgtcgggag catcaatctt
    16021 taaatctttg ggaaatgctt ctgctggccc ctggccgatt tttagtagcc gctcaaaaga
    16081 gagttttact gcttcggcag tgaccggtgt gccatcggca aatttagcat tgtccttcag
    16141 ggtgaacgtc cactcttttt gatcgtcaga cgctttccag ctacttgcca gatcgccttc
    16201 aacgtcggtt gagcctttat caccgtccgt tttgtactga accagccgct gataagacgg
    16261 gtaggtcacc gtccagtcgt tattatctat tgttaccgcc ggggcgaggg tttgtggatc
    16321 ggcggcctta ccaatcacca gcatatcttt cggtacggcg gcgtgcgcaa ccgggaaagt
    16381 tgtggcaagg acgagcgcga gcaatgtagg acgaaacggt atcgatctct tcatgacagt
    16441 ttcctgatta actgacgtgc tgtgtgccag gggatataaa acaggtgaat tgatcagcga
    16501 gcagtgggta actcgctgcc tggggtaatt cgaagtgcca ccattcgctg gagataccga
    16561 caaaaccgcc accagtcata atcgcattca gcaacagccg attgcgctga gcggcgggcg
    16621 ggacggaagg gtgataggca tgggagcgct cgtgcatttc atcgaaccct gcgcccatat
    16681 cgaggatgtt cccgtgctca tcacgaagcg tcaggtcgat cgccgtgcca cggctgtgat
    16741 tagaaccgac cgtcacatca acaacatatt gcgggtctgg gcaggcttgc cacaacatcg
    16801 cctgtgcttg ttgtgggcga tacgcatcgt aaatcaccag ttgtaagcct gacagctggg
    16861 cgatactgat acttttcgcc agcgcggtaa tcgcatcctt gtgtagcaga caacgcgctt
    16921 gctgataaat agctttacct gtgatgttat cagcgcaggc gtatttcaat tcgatctcca
    16981 gatcagggaa gattacggct aaatcaacca gttcggtggt atccgacata aacggttcct
    17041 gtataagaca aaaattgctg cgctttccgc ttatgcagat ctcatgccat gccgggataa
    17101 gcgccagaat gctggcttaa agttatattt tttaactttt gatcaacatt tgtgcagcgt
    17161 agtgcagttt tggtgcaaga ggggaagtta aggaaggaat ctcccggaat cgtagatgaa
    17221 atcacagtat ttaagtgacg gtgtcacgtt aaatgaaaac ccgcgagtgc gggcgagagg
    17281 aatttgtcag attttcagcg gtaacacgct gctcatccag cctggaattt cttcggcggg
    17341 tagggggcgg gaaaagaaat atccctgaat aacgcgacag tggatcttgc gtagcatctc
    17401 aaattgctct ttggtttcga cgccttccgc cacgacggtt aaattgaggc tttgcccaat
    17461 gctggtaatg gcttcaagta aggcaaggat gcgtttttcg gtcagacaac gatcgacaaa
    17521 acttttgtca attttgattt ccgttaccgg aagactgact aagcgggata atccggaaaa
    17581 gcccgtacca aaatcatcta ccgataagcc cacgcccata tcacgcagga tctgaatgcg
    17641 cttaaagatt tcggtatcgt gttccatcat catgctttcc gtgatttcta ccgtcagctg
    17701 gtggccgtca ataccccagg cgtgcattgc atcagacacc tgattaggca gttgattact
    17761 gcgaaagtgc agtgccgaca agttaacgga aagcgccggg atatgaatat tctggctacg
    17821 ccattctgct aactgacggc aagcttccgc gatgacccag cgcccaatat tttcgatttc
    17881 accaatctct tctgcgagag gaataaaccg tgaagggggc acatgaccat gctggggatc
    17941 gtgccagcgc gcaagggctt cgatgccgta cagttcaccc gtttctgcga agatttgcgg
    18001 ctggtaaaca agtttcagtt ggttattgct aatcgcttct ttcagcgctg cgcctaaaac
    18061 caaacgctct tttaccattt cgttcatcgc cgggctgaag aactgccagc cgttaccgcc
    18121 attcttgcga atataatcta ttgcattgtg agcagtggag agtaggtaat cgtggttttt
    18181 acccacgtcg tagctgatgc caatactcaa ggtaagcggg aatggtttat cgtcaatcat
    18241 tatcggcttg ctgaccacat tccgtagctc atcggcgatc tgggtaatgt tactgacgtc
    18301 gttttccagg ctcacgagga caaactgcgt accttcgata cgacagagat actgatccgg
    18361 tttgagtttt ccacgaaagc gattgaccac ttccagcaat gcctgatcgg cccacgcata
    18421 gccaaggcta tcaatcacat cctgaatatg gtcaacaccg atgagataca ccaccggaga
    18481 gacggctttg tcgaccaggt catcgaggta attgtgcagg ttattgcgat ttggcagacc
    18541 ggtcatcgga tcaaattgga tgagttgttc aatatgctgg cggctttttt cctgttccag
    18601 cgccagcgcg gccatatgct gactgatatc tgccacgcgt tcgataaagg cgctggtttc
    18661 tgctcctgac gaggttttaa tttgcaggat ccccgcaggc gcgccatcac gctgacgaat
    18721 ggtcgctgac cagctttgcg cattttgaac ttctgcaccg tgcgaagatg acgcccagtg
    18781 tatcggcatc ccgttgcgca gtgcgaacag cgaaacatgc gattcgttga gaacagattc
    18841 gatgttacga caaatgattt cccccatttc atgaaatggc gggctgctgc acatggcggc
    18901 gagaatattg ccttcaagct ggcggatttg ccgttcttcg gtgatatccg agaaagtcat
    18961 taccaggttc tgcagatgcg cgagcacgtc ataaaccggg ctgatagagg ctttaatcca
    19021 gattttttca ccggtgcgcg tcaacagcag aaattcgtcc tgatcgcggg cggttttcca
    19081 tagcaactgt tgtaaacgaa tgcggttatc ggcagggaat tcaggaatgt tcaggagtgt
    19141 atcgggctgc ataccgctgg cttcgctaat gcagtaacca aacatttcgg taaatgcgcg
    19201 attgcactgc acaatatggc gttccggatc gaggacaatc accggtcggt cgagatggtc
    19261 aacggcaata atcaattgtc gggtctgttc tttttgcgcc atttctacgc tggcatcccg
    19321 taccagcgcc aggtaataaa ctttcccctc ggcgctcact ttcgatagcg caaaacgggt
    19381 ccagatttta ctgccgtctt ttttctccag ctgcagctcc cgactcatcc cctcgacgcg
    19441 cgctttacca ccttcacggt tatgacgaat gtattcagga tgcgcaggac gcaaatcccg
    19501 cggaatcagc atatcaatgt tattgccaat gacttcttca cgtttgtacc cccagagctt
    19561 ctctgcggcg gggttgaaaa acatcacttc atcattttcg ttaattaaca ccgcgcccat
    19621 catattttgt tcaagggcgg ggaaaaaaat gccatcggcg gcattttccg catcggttag
    19681 cttcatgatt acctctgcat cctggcgcat ctaaagactg gctttccaga gttcaacacg
    19741 gtttctacct cgtcttttgg cgatatacag agcttcatcg gctatttgaa tgaggcgctc
    19801 atagtcagga tgaccattaa acatggcggc accgatggaa agtgagaggg caatatcctc
    19861 gccgtttgcg gctttcagtt tggttttctc cacccgactg cgaatacgtt ctgcggtacg
    19921 taacgtttcg ttttcagaag cttcagtcaa aacaatgata aattcatcgc ccccgtagcg
    19981 aaaaacataa tcactactgc ggacgttgtc ataaaaggcc tgagagactt tacgcagaat
    20041 ttcatcgcca gtgttatggc cccacgtatc gttgatctct ttgaatttat caacgtcaat
    20101 aatcagcact gacagcggtg taccggtccg gttggcatgg gcaatttcgc gtttgaagat
    20161 agtcggcagg aagcggcggt taagtaattt cgtcagtaca tccataccga cttcgtggcg
    20221 cgatacttct tcaaacaatt cacgcagcaa ggtaataatt tgcgatacag tatttcttat
    20281 ctgtaataaa aatttcaccc gcagacttct gttattcaaa ttcctggtgt tacgcatggt
    20341 ttgattgaat ataccgtcga aatcctgaat cagacgggag atatgcctac ttcggcaatg
    20401 ccactaaaat aatgtcgacc tttatggtta aaccacaggc caaaatcagc ctggcttaaa
    20461 ggcaaactac tgcctaaatc agaatccagc aggattttat agataatatc tatttcccat
    20521 gaaagtattg aggctatttg ccgttctttt tcttcttcgg cgttttctag taacgagaag
    20581 atacgatagt tttcatcttc ctttgaggca ctactgtcac taaaggtaaa cgcgcgggtc
    20641 atcacttcca tagcgatatc aatactgtta atcgagaaat ggtagacctg aagtttttct
    20701 gcggcagaat aatccgaaga gaagattacc ggatagagga tttttttcag cacccgaaac
    20761 cccatctcga caatttctac cggaattcct atgcgggcat gcacttccgc gacggtatgc
    20821 tggatttgta ttagcctttc gacatcgtca acctgggcag aaagcacgtt aataatccag
    20881 cgttccatcg cacttttcaa ctgccgctca acttgttcat tactcaagaa ttcttcggca
    20941 tgcgggtcga tgcggacaat tcgataaaac tcgatactca gataatgagc atgcgcaacg
    21001 gcaatttccg cggctttagc acgaatgagt ggatctgcct gttcgacaag tccggtccac
    21061 tcatctttca ttcttttaaa atacatctcc ataattcaca cccttataag gctgggaaat
    21121 cagacggaat caaaacgcaa cgtgcgagat cgactaactg caccatattc tcctgaaata
    21181 tgaagatata ctgaaaagaa ataagcgact taggacagtt tcaatctacg ctactgttct
    21241 tcagaagagt atagcccatc gtaattattt ttcggtgaca gcgaatatcg tatggttttt
    21301 catattcata catttttatt agggatttat agctgtttaa ctaagtgtgg ttaattgcgt
    21361 ggttaatttg acttatgtaa gcatgattac tagtgggata tttcacaagg tgtaacaagc
    21421 cggtgggtaa agcaccggct tgttacaaag taagcatggg agtttaactg ccccaacgac
    21481 tttgcagata gctgaccgct tgttgagtct gcggtttatt cagatagtcc tcacggaaca
    21541 agatggtgcc gctaatttct ggtaccgcat cgttaagatc gagctgcttt ttcagttccg
    21601 gtacgccgcc gttaatcatc cagtctggct ctatctttga aggttcaccc actttataga
    21661 aggcgatacc gatatacagg cgggtcctgg tcggtttaac gacatccgcc caccattttg
    21721 ccaacacgtc ataacgcgcg gcactccgtg agaacggcca gtaaatttgg ggagcaatgt
    21781 aatccagcaa tccttgttcc acccatcgac gggtgtcagc gtaggattcg tcataggctg
    21841 ccgcgcctcg ggtatcggaa ccgagcggat cgtgtgatcg gttacgccac acgcctgccg
    21901 ggctaacgcc aaattcgact cccggcttaa tgcttttaat ggtgtgcgat acttttgtaa
    21961 ttaactgctg agtattgttg cgccgccagt ctgcttttga cgcaaatgcg cctccgtatt
    22021 tacggtacgt ttcgttatca tttagccgtg aacccggtga ctccgtatag aaatagtcgt
    22081 caaactgcac gccatctacc ggatagcggg aaaccacttc ggcgactatt gatgtgatcc
    22141 agtcctgaac ctcagggatg cccgggtcga ggacaaagcg atcgccagac gttctgatcc
    22201 agtcacggtg ttgcacatag acgctcgccg gttgttgaga cagagtgcta ttcagttccc
    22261 tgatagtacc gggcttcgta ttaaccgata cgcgataggg gttaaaccag gcgtgtactt
    22321 tcatcccacg cttgtgggct tcgtcgagca taaattgcag cggatcgtaa cccggatttt
    22381 caccaatctt accggtcata agatcggacc acggcaaaat ttttgatggc cacagggcgg
    22441 taccgtccgg cttgacctgg aaaaagaccg tgtttatacc gagacgttgc agatgatcca
    22501 gtttgtcgat catcgcctgt tgttgtacac gggcccggct ggtggggtta ctaatgttaa
    22561 ccgaggaaac cggtggccag tcgaggcgag acaccgtggc cagccagatg ccacgcatcg
    22621 gttgtgacga ttgttgcgtc gtggctggtg gctttgaacc tgctggtggt gtcaccatgg
    22681 actctggagg cgtgctttta caactacaca gtaaaagtgc cagtgcaacc agtatcgctg
    22741 gtcttctaat cgttaatttc ttgtttcggg agcagatatc catatgtgct ggtttccggt
    22801 aaacagatgt gcgctcattc tcgtacttat cccggttaag tcaatacgac agcaagcacg
    22861 aaaaagggag cgatgaatta tcgctccctt gtcttataac cattcagaca tggttagtgt
    22921 ttcttgtcat tcatcacaat atagtgtggt gaacgtgcac gcgggtgcag gaagaagtga
    22981 ccttttggtg cgttctgact gttgattggc tccagagtga cgccggtatt cgctttgcct
    23041 ttacgatcat gaacagcata gagaataaag ggcagggcaa gtaccaccag gaaactaacg
    23101 accagtaatt caacatacat atcggtagag tcaccctgga tgttatccgg cggcaggaag
    23161 gaaacaataa acgccataat tgaagtcagc agaccgacaa ttgccacgac cagtttcacc
    23221 cctttaccac cagggatatt aaatgtgcgt tttaagtcag gatgtttaag aaccaacaca
    23281 atgtagccaa taaacagcat gaaataagca cacagataaa tcaccaccgt cagcgccagt
    23341 gcgatcagga aggacatgtt gttaccgcca ccggtattgg tgaggatgat caacgcgata
    23401 gaagtaatca ccagctgcga aatgaccagc gttaccggta cgccattttt gttcatttta
    23461 gcgaatgccg ctggcagcag gtttttctgc gctgtgacat acatcccgcg agaaggacca
    23521 acaatccagg aggcgatttc cgccagaaca cccagcaaca gcagtgcgga gatcacgcga
    23581 accgtccact caatttccgg tgccacatgg gacatcagaa cggtaaaggt ttgcattacc
    23641 cctgcggaga ggttgatttc attacccgga atgaccatcg caatagataa accgccaaca
    23701 gagcttaagc agattgccgc caccatcagc agtaacatag ccagtggata gtcgcgcccg
    23761 gggttgctca tttcattgac gtgagttgcg gaagcttcta cgcccatata actcaaaatg
    23821 aaggcaacaa atacaaccag tgtgcccact ttagagaagt cagggaagaa ggtcttcgaa
    23881 tccatttcga tagcaacggg ggcaccggag tgcagataaa tagccgctaa tgcgatcaaa
    23941 ataaatgcag gtaacaggat accggcgaag aagccaactt tagcaattcg cgccgtgtat
    24001 ttcgtgccac caaactgcgt taatgccagc gcccaaagaa tgatgagtgc tgcaatagtt
    24061 ttggtaatgg ggtcttcatt cagcgctggc catttcagga tgtaggagag tgcccctaac
    24121 acgaaataga gcatcggaat aaaaccaatg gcgatttgca gatagccaaa tgagatcgct
    24181 gcaaatcccc atctcggccc cagagtattt gatacccagg cgaagacacc accttcttcc
    24241 cagccgtcga cggtggccat ttccgcagca caaagtccca cgggaataaa ccataaaatc
    24301 ccgcctaata gcaggaagaa gactaatgaa aagcccgatg ttgcgaaggt agggtattca
    24361 taaacagcca ttaccatcga tgccgttatg gcaaagaatc cgagtaatgt gagctgctta
    24421 gctttacctg tctgtactga tgtagccata ttatccccct aaaacggtat tcctgtcgga
    24481 accgcacctg ttttgttctg aagcgtattc agaacaatat tttccgttgc taatgccagt
    24541 gaacagactt tggaaattgt cccgaaacgg gttcgtttcg ggacatcgtt accgttaaac
    24601 gttatcaggt atgtttaaag ctgttctgct gggcaatacc ctgcagtttc gggtgatcgc
    24661 tgagatattt cagggaggct ttgtagtctt ccagcaacag ttcagcaaag tccatttcga
    24721 agccgcgacg acacataat
//
LOCUS       DADMJE010000050        24059 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.051, whole genome shotgun sequence.
ACCESSION   DADMJE010000050 DADMJE010000000
VERSION     DADMJE010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 24059)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24059)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24059
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.051"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            322..549
                     /gene="feoA"
                     /locus_tag="JN001_001809"
     CDS             322..549
                     /gene="feoA"
                     /locus_tag="JN001_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transporter A"
                     /protein_id="HAY9053065.1"
                     /translation="MQYTPDTAWKITGFSREISPAYRQKLLSLGMLPGSSFNVVRVAP
                     LGDPIHIETRRVSLVLRKKDLALLEVEAVSC"
     gene            566..2887
                     /gene="feoB"
                     /locus_tag="JN001_001810"
     CDS             566..2887
                     /gene="feoB"
                     /locus_tag="JN001_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(2+) transporter permease subunit FeoB"
                     /protein_id="HAY9053066.1"
                     /translation="MKKLTIGLIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGQ
                     FSTTDHQVTLVDLPGTYSLTTISSQTSLDEQIACHYILSGDADLLINVVDASNLERNL
                     YLTLQLLELGIPCIVALNMLDIAEKQNIRIEIDALSARLGCPVIPLVSTRGRGIEALK
                     LAIDRYKANENVELVHYAQPLLNEADSLAKVMPSDIPLKQRRWLGLQMLEGDIYSRAY
                     AGEASQHLDAALARLRNEMDDPALHIADARYQCIAAICDVVSNTLTAEPSRFTTAVDK
                     IVLNRFLGLPIFLFVMYLMFLLAINIGGALQPLFDVGSVALFVHGIQWIGYTLHFPDW
                     LTIFLAQGLGGGINTVLPLVPQIGMMYLFLSFLEDSGYMARAAFVMDRLMQALGLPGK
                     SFVPLIVGFGCNVPSVMGARTLDAPRERLMTIMMAPFMSCGARLAIFAVFAAAFFGQN
                     GALAVFSLYMLGIVMAVLTGLMLKYTIMRGEATPFVMELPVYHVPHVKSLIIQTWQRL
                     KGFVLRAGKVIIIVSIFLSAFNSFSLSGKIVDNINDSALASVSRVITPVFKPIGVHED
                     NWQATVGLFTGAMAKEVVVGTLNTLYTAENIQDEEFNPAEFNLGEELFSAIDETWQSL
                     KDTFSLSVLMNPIEASKGNGEMGTGAMGVMDQKFGSAAAAYSYLIFVLLYVPCISVMG
                     AIARESSRGWMGFSILWGLNIAYSLATLFYQVASYSQHPTYSLVCILAVILFNIVVIG
                     LLRRARSRVDIELLATRKSVSSCCAASTTGDCH"
     gene            2887..3123
                     /gene="feoC"
                     /locus_tag="JN001_001811"
     CDS             2887..3123
                     /gene="feoC"
                     /locus_tag="JN001_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="[Fe-S]-dependent transcriptional repressor FeoC"
                     /protein_id="HAY9053067.1"
                     /translation="MASLIQVRDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMG
                     KAVRIQEEPDGCLSGSCKSCPEGKACLREWWALR"
     gene            3326..4204
                     /gene="rpnA"
                     /locus_tag="JN001_001812"
     CDS             3326..4204
                     /gene="rpnA"
                     /locus_tag="JN001_001812"
                     /EC_number="3.1.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination-promoting nuclease RpnA"
                     /protein_id="HAY9053068.1"
                     /translation="MSKKQSSTPHDALFKLFLRQPDTARDFLAFHLPAPIHALCDMKT
                     LKLESSSFIDDDLRESYSDVLWSVKTEQGPGYIYCLIEHQSTSNKLIAFRMMRYAIAA
                     MQNHLDAGYKTLPMVVPLLFYHGIESPYPYSLCWLDCFADPKLARQLYASAFPLIDVT
                     VMPDDEIMQHRRMALLELIQKHIRQRDLMGLVEQMGCLLSSGYANDRQIKGLFNYILQ
                     TGDAVRFNDFIDGVAERSPKHKESLMTIAERLRQEGEQSKALHIAKIMLESGVPLTDI
                     MRFTGVSEEELAAASQ"
     gene            complement(4233..5003)
                     /gene="bioH"
                     /locus_tag="JN001_001813"
     CDS             complement(4233..5003)
                     /gene="bioH"
                     /locus_tag="JN001_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709189.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-ACP methyl ester esterase BioH"
                     /protein_id="HAY9053069.1"
                     /translation="MNNIWWQTKGQGNVHLVLLHGWGLNAEVWRCIDEELSSHFTLHL
                     VDLPGFGRSQGFGALSLADMAEAVLQQAPDKAIWLGWSLGGLVASQIALTHPERVQAL
                     VTVASSPCFSARDDWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARA
                     LKKTVLALPMPEVDVLNGGLEILKTVDLRQPLQNVPMPFLRLYGYLDGLVPRKVVPML
                     DKLWPRSKSYIFAKAAHAPFISHPVEFCHLLVALKQRV"
     gene            5041..5724
                     /gene="gntX"
                     /locus_tag="JN001_001814"
     CDS             5041..5724
                     /gene="gntX"
                     /locus_tag="JN001_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417872.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA utilization protein GntX"
                     /protein_id="HAY9053070.1"
                     /translation="MLTVPGLCWLCRMPLALGHWGICSVCSRAARTDKTLCPQCGLPA
                     THSHLPCGRCLQKPPPWQRLVTVADYAPPLSPLIHQLKFSRRSEIASALSRLLLLEVL
                     HARRTTGLQLPDRIISVPLWQRRHWRRGFNQSDLLCQPLSRWLHCRWDSEAVTRTRAT
                     ATQHFLSARLRKRNLKNAFRLELPVQGRHMVIVDDVVTTGSTVAEIAQLLLRNGAATV
                     QVWCLCRTL"
     gene            5783..6358
                     /gene="nfuA"
                     /locus_tag="JN001_001815"
     CDS             5783..6358
                     /gene="nfuA"
                     /locus_tag="JN001_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016942932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S biogenesis protein NfuA"
                     /protein_id="HAY9053071.1"
                     /translation="MIRISDAAQAHFAKLLANQEEGTQIRVFVINPGTPNAECGVSYC
                     PPDAVEATDTALKFDLLTAYVDELSAPYLEDAEIDFVTDQLGSQLTLKAPNAKMRKVA
                     DDAPLMERVEYMLQSQINPQLAGHGGRVSLMEITEDGYAILQFGGGCNGCSMVDVTLK
                     EGIEKQLLNEFPELKGVRDLTEHQRGEHSYY"
     gene            6719..8035
                     /gene="gntT"
                     /locus_tag="JN001_001816"
     CDS             6719..8035
                     /gene="gntT"
                     /locus_tag="JN001_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY9053072.1"
                     /translation="MPLVIVAIGVILLLLLMIRFKMNGFIALVLVALAVGLMQGMPLD
                     KVIGSIKAGVGGTLGSLALIMGFGAMLGKMLADCGGAQRIATTLIAKFGKKHIQWAVV
                     LTGFTVGFALFYEVGFVLMLPLVFTIAASANIPLLYVGVPMAAALSVTHGFLPPHPGP
                     TAIATIFNADMGKTLLYGTILAIPTVILAGPVYARVLKGIDKPIPEGLYSAKTFSEEE
                     MPSFGVSVWTSLVPVVLMAMRAIAEMILPKGHAFLPVAEFLGDPVMATLIAVLIAMFT
                     FGLNRGRSMDQINDTLVSSIKIIAMMLLIIGGGGAFKQVLVDSGVDKYIASMMHETNI
                     SPLLMAWSIAAVLRIALGSATVAAITAGGIAAPLIATTGVSPELMVIAVGSGSVIFSH
                     VNDPGFWLFKEYFNLTIGETIKSWSMLETIISVCGLVGCLLLNMVI"
     gene            complement(8080..10164)
                     /gene="malQ"
                     /locus_tag="JN001_001817"
     CDS             complement(8080..10164)
                     /gene="malQ"
                     /locus_tag="JN001_001817"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HAY9053073.1"
                     /translation="MESKRLDNAALAAGISPNYINAHGKPQSISAETKRRLLDAMHQR
                     TATKVAVTPVPNVMVYTSGKKMPMVVEGSGEYSWLLTTEEGTQYKGHVTGGKAFNLPT
                     KLPEGYHTLTLTQDDQRAHCRVIVAPKRCYEPQALLNKQKLWGACVQLYTLRSEKNWG
                     IGDFGDLKAMLVDVAKRGGSFIGLNPIHALYPANPESASPYSPSSRRWLNVIYIDVNA
                     VEDFHLSEEAQAWWQLPTTQQTLQQARDADWVDYSTVTALKMTALRMAWKGFAQRDDE
                     QMTAFRQFVAEQGDSLFWQAAFDALHAQQVKEDEMRWGWPAWPEMYQNVDSPEVRQFC
                     EEHRDDVDFYLWLQWLAYSQFAACWEISQGYEMPIGLYRDLAVGVAEGGAETWCDREL
                     YCLKASVGAPPDILGPLGQNWGLPPMDPHIITARAYEPFIELLRANMQNCGALRIDHV
                     MSMLRLWWIPYGEMADQGAYVHYPVDDLLSILALESKRHRCMVIGEDLGTVPVEIVGK
                     LRSSGVYSYKVLYFENDHEKTFRAPKAYPEQSMAVAATHDLPTLRGYWESGDLTLGKT
                     LGLYPDEVVLRGLYQDRELAKQGLLDALHKYGCLPKRAGHKASLMSMTPTLNRGLQRY
                     IADSNSALLGLQPEDWLDMAEPVNIPGTSYQYKNWRRKLSATLETMFADDGVNKLLKD
                     LDRRRRAAAKKQ"
     gene            complement(10174..12567)
                     /gene="malP"
                     /locus_tag="JN001_001818"
     CDS             complement(10174..12567)
                     /gene="malP"
                     /locus_tag="JN001_001818"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltodextrin phosphorylase"
                     /protein_id="HAY9053074.1"
                     /translation="MSQPIFNDKQFQEALSRQWQRYGLNSAAEMTPRQWWLAVSEALA
                     EMLRAQPFAKPVANQRHVNYISMEFLIGRLTGNNLLNLGWYQEVQDSLKAYDINLTDL
                     LEEEIDPALGNGGLGRLAACFLDSMATIGQSATGYGLNYQYGLFRQSFVDGKQVEAPD
                     DWHRSNYPWFRHNEALDVQVGIGGKVTKDGRWEPEFTITGQAWDLPVVGYRNGVAQPL
                     RLWQATHAHPFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNHTAGKKLRLMQQYFQ
                     CACSVADILRRHHLAGRKLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAW
                     AITSKTFAYTNHTLMPEALERWDVKLVKGLLPRHMQIINEINTRFKTLVEKTWPGDEK
                     VWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTN
                     GITPRRWIKQCNPALAALLDKLLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANK
                     VRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVP
                     RVFLFGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLQDYCVSAAEKLIP
                     AADISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIFIFGHTVE
                     QVKAILAKGYDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLHSIGKQGGDPYL
                     VMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR"
     gene            13179..15884
                     /gene="malT"
                     /locus_tag="JN001_001819"
     CDS             13179..15884
                     /gene="malT"
                     /locus_tag="JN001_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MalT"
                     /protein_id="HAY9053075.1"
                     /translation="MLIPSKLSRPVRLDHTVVRERLLAKLSGANNFRLALITSPAGYG
                     KTTLISQWAAGKNDIGWYSLDEGDNQQERFASYLIATVQQATNGHCAICETMAQKRQY
                     ASLTSLFAQLFIELAEWHSPLYLVIDDYHLITNPVIHESMRFFIRHQPENLTLVVLSR
                     NLPQLGIANLRVRDQLLEIGSQQLAFTHQEAKQFFDCRLSSPIEAAESSRICDDVSGW
                     ATALQLIALSARQNTHSAHKSARRLAGINASHLSDYLVDEVLDNVDLATRHFLLKSAI
                     LRSMNDALITRVTGEENGQMRLEEIERQGLFLQRMDDTGEWFCYHPLFGNFLRQRCQW
                     ELAAELPEIHRAAAESWMAQGFPSEAIHHALAAGDALMLRDILLNHAWSLFNHSELSL
                     LEESLKALPWDSLLENPQLVLLQAWLMQSQHRYGEVNTLLARAEHEIKDIREGTMHAE
                     FNALRAQVAINDGNPDEAERLAKLALEELPPGWFYSRIVATSVLGEVLHCKGELTRSL
                     ALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQL
                     PMHEFLVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARGD
                     LDNARSQLNRLENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEFA
                     NNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLRLMSDLNRNLLLLNQLYWQ
                     AGRKSDAQRVLLDALKLANRTGFISHFVIEGEAMAQQLRQLIQLNTLPELEQHRAQRI
                     LREINQHHRHKFAHFDENFVERLLNHPEVPELIRTSPLTQREWQVLGLIYSGYSNEQI
                     AGELEVAATTIKTHIRNLYQKLGVAHRQAAVQHAQKLLKMMGYGV"
     gene            complement(15927..16943)
                     /gene="rtcA"
                     /locus_tag="JN001_001820"
     CDS             complement(15927..16943)
                     /gene="rtcA"
                     /locus_tag="JN001_001820"
                     /EC_number="6.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 3'-terminal phosphate cyclase"
                     /protein_id="HAY9053076.1"
                     /translation="MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITSIRAGRAK
                     PGLLRQHLTAVKAAAEICRATVEGAELGSQRLVFRPGAVRGGEYRFAIGSAGSCTLVL
                     QTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKIGIHQQTTLLRHGFY
                     PAGGGVVATEVSPVASFNTLQLGERGNIVQMRGEVLLAGVPRHVAEREIATLAGSFSL
                     HEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLAS
                     PAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFGLIEIDGVTR
                     VSIE"
     gene            complement(16947..18173)
                     /locus_tag="JN001_001821"
     CDS             complement(16947..18173)
                     /locus_tag="JN001_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HAY9053077.1"
                     /translation="MNYELLTTENAPVKMWTKGVPVEADARQQLINTAKMPFIFKHIA
                     VMPDVHLGKDSTIGSVIPTKGAIIPAAVGVDIGCGMNALRTALTAEDLPENLAELRQA
                     IETAVPHGRTTGRCKRDKGAWENPPVNVDAKWAELEAGYQWLTQKYPRFLNTNNYKHL
                     GTLGTGNHFIKICLDESDQVWIMLHSGSRGIGNAIGTYFIDLAQKEMQETLETLPSRD
                     LAYFMEGTEYFDDYLKAVAWAQLFASLNRDVMMENVVTALQSITQKTVRQPQTLAMEE
                     INCHHNYVQKEQHFGEEIYVTRKGAVSARAGQYGIIPGSMGAKSFIVRGLGNEESFCS
                     CSHGAGRVMSRTKAKKLFSVEDQIRATAHVECRKDAEVIDEIPMAYKDIDAVMTAQSD
                     LVEVIYTLRQVVCVKG"
     gene            18362..19960
                     /locus_tag="JN001_001822"
     CDS             18362..19960
                     /locus_tag="JN001_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma 54-dependent transcriptional regulator"
                     /protein_id="HAY9053078.1"
                     /translation="MRKTVAFGFVGTVLDYAGRGSQRWSKWHPTLCLCQQESLVIDRL
                     ELLHDARSCSLFETLKRDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQ
                     PEKEDYLIHITTGTHVAQICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLD
                     LSRYNAIASRFAEERQQTLDFLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTG
                     AGKSFLARRIFELKQARHQFSGAFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREG
                     LLRSANGGMLFFDEIGELGADEQAMLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDL
                     RQLVAKGKFREDLYARINLWTFTLPGLRQRQEDIEPNLDYEVERHATLTGDSVRFNTE
                     ARRAWLAFATSPQATWRGNFRELSASVTRMATFATSGRITLDVVEDEINRLRYNWQES
                     RPSALTALLGAEAENIDLFDRMQLEHVIAICRQAKSLSATGRQLFDVSRQGKASVNDA
                     DRLRKYLARFGLTWEAVQDQHSSS"
     gene            complement(19942..20700)
                     /locus_tag="JN001_001823"
     CDS             complement(19942..20700)
                     /locus_tag="JN001_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000815090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR family transcriptional regulator"
                     /protein_id="HAY9053079.1"
                     /translation="MKQTQRHNGIIELVKQQGYVSTEELVEHFSVSPQTIRRDLNELA
                     EQNLILRHHGGAALPSSSVNTPWHDRKATQTEEKERIARKVAEQIPNGSTLFIDIGTT
                     PEAVAHALLNHSNLRIVTNNLNVANTLMVKEDFRIILAGGELRSRDGGIIGEATLDFI
                     SQFRLDFGILGISGIDSDGSLLEFDYHEVRTKRAIIENSRHVMLVVDHSKFGRNAMVN
                     MGSISMVDAVYTDAPPPVSVMQVLTDHHIQLELC"
     gene            complement(20717..21547)
                     /gene="glpG"
                     /locus_tag="JN001_001824"
     CDS             complement(20717..21547)
                     /gene="glpG"
                     /locus_tag="JN001_001824"
                     /EC_number="3.4.21.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease
                     GlpG"
                     /protein_id="HAY9053080.1"
                     /translation="MLMITSFANPRVAQAFVDYMATQGVILTIQQHNQSDVWLADESQ
                     AERVRAELARFLENPADPRYLAASWQAGHTGSGLHYRRYPFFAALRERAGPVTWVVMI
                     ACVVVFIAMQILGDQEVMLWLAWPFDPTLKFEFWRYFTHALMHFSLMHILFNLLWWWY
                     LGGAVEKRLGSGKLIVITLISALLSGYVQQKFSGPWFGGLSGVVYALMGYVWLRGERD
                     PQSGIYLQRGLIIFALIWIIAGWFDLFGMSMANGAHIAGLAVGLAMAFVDSLNARKRK
                     "
     gene            complement(21592..21918)
                     /gene="glpE"
                     /locus_tag="JN001_001825"
     CDS             complement(21592..21918)
                     /gene="glpE"
                     /locus_tag="JN001_001825"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase GlpE"
                     /protein_id="HAY9053081.1"
                     /translation="MDLFECINVADAHQKLQEKEAVLVDIRDPQSFAMGHAVQAFHLT
                     NDTLGAFMRDNDFDTPVMVMCYHGNSSKGAAQYLLQQGYDVVYSIDGGFEAWQRQFPA
                     EVAYGA"
     gene            22108..23613
                     /gene="glpD"
                     /locus_tag="JN001_001826"
     CDS             22108..23613
                     /gene="glpD"
                     /locus_tag="JN001_001826"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HAY9053082.1"
                     /translation="METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSA
                     SSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPHIAFPMRFRLPHRPHLRPAWMIR
                     IGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV
                     RKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDEGM
                     HLPSPYGIRLIKGSHIVVPRVHTQKQAYILQNEDKRIVFVIPWMDEFSIIGTTDVEYK
                     GDPKAVKIEESEINYLLKVYNAHFKKQLSRDDIVWTYSGVRPLCDDESDSPQAITRDY
                     TLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTPYYQGIGPAWTKESVLPGGAIE
                     GDRDDYAARLRRRYPFLTESLARHYARTYGSNSELLLGNAGAISDLGEDFGHEFYEAE
                     LKYLVDHEWVRRTDDALWRRTKQGMWLNADQQSRVSQWLVEYTQQKLSLAS"
     gene            complement(23665..>24059)
                     /locus_tag="JN001_001827"
     CDS             complement(23665..>24059)
                     /locus_tag="JN001_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053083.1"
                     /translation="VMAGIGWQFSRRTPPELKNRLHCWLVFSPVYFWLILSNFILYIS
                     PEKSALLENIRNFFLTFVWPPLNFSPFWPQPWTDFVGPISAQLGFALGYYCHWCRKNR
                     NQRKKWGDWVTCLSLAILAQGPLFNYLQ"
BASE COUNT         5657 a         6552 c         6078 g         5772 t
ORIGIN      
        1 caaactcata atatattccg gcaatattta tcacttcatt aacaactgaa accttaatta
       61 aacattagcc agtccgggta attcactatt cgaattatat tttcgctgcg atataacctt
      121 gagccacatc aacattgagt cagattatta ttcaaaccaa cattcgcaca cattttaagt
      181 attgctgata gaaaccattc tcattatcat tgtgttattg attatttaat ctctcctttg
      241 ttggcaaatc atctggtctc atgtcgctgt caaacgcccc atgaggtagt tatccagtta
      301 atgagaaaca agtaggcacc tatgcaatac actccagata ctgcgtggaa aatcactggc
      361 ttttcccgtg aaatcagccc ggcatatcgc caaaaactgc tttctcttgg catgttacct
      421 ggctcctctt ttaatgtggt gcgcgtcgct ccactcggcg accccattca tatcgaaacc
      481 cgtcgtgtga gcctggtatt acgcaaaaaa gatctggcct tattagaagt ggaagcggtt
      541 tcctgttaat acggtgataa caacaatgaa aaaattaacc ataggcttaa ttggtaatcc
      601 aaattctggc aagacaacct tatttaacca gctcactggc gcacgtcagc gtgtaggtaa
      661 ctgggctggc gttaccgtcg aacgtaaaga agggcaattc tccaccaccg atcatcaggt
      721 cacgctggtg gacctacccg gcacctattc tctgaccacc atctcatcgc agacctcgct
      781 cgatgagcaa atcgcctgtc actacatttt gagtggcgac gccgacctgc tgattaacgt
      841 ggtggatgcg tctaaccttg agcgtaacct gtacctgacg ctacaactgc tggaactcgg
      901 cattccctgc attgtggcac tgaacatgct cgacattgcc gagaagcaaa atattcgtat
      961 tgaaattgat gctctgtcgg cgcgtctggg ctgtccggtg atcccgctgg tttcaacccg
     1021 tggtcgcggt attgaagcgc tcaagctggc gattgatcgc tataaagcta acgagaatgt
     1081 ggaactggtg cattacgcac agccgctgct caacgaagca gattcactgg caaaagtgat
     1141 gccttccgac atcccgctga aacaacgtcg ctggctgggc ctgcaaatgc tggaaggcga
     1201 tatctacagc cgcgcctacg ccggtgaagc gtcgcagcat ctggatgccg ccctcgcccg
     1261 tctgcgtaat gagatggacg atccggcgct gcacattgcc gatgcgcgtt accagtgcat
     1321 tgctgccatc tgtgatgtgg taagcaacac cctgacggca gaacccagcc gtttcaccac
     1381 tgcggtagat aaaatcgtgc tcaaccgttt cctcggtctg ccgattttcc tctttgtgat
     1441 gtacctgatg ttcctgctgg ctatcaacat cggcggggcg ttacagccgc tgtttgacgt
     1501 cggctccgtg gcgctatttg tgcatggtat tcaatggatt ggctacacgc tccacttccc
     1561 ggactggctg actatcttcc tcgcccaggg cctgggtggc ggcattaaca ccgtgctgcc
     1621 actggtgccg cagattggca tgatgtacct gttcctctcc ttccttgagg actccgggta
     1681 tatggcgcgt gcggcgtttg tgatggaccg tctgatgcag gcgctgggct tgccggggaa
     1741 atcctttgtg ccgctgatcg tcggtttcgg ttgtaacgta ccgtcggtaa tgggtgcacg
     1801 tacgcttgat gcaccgcgtg aacgtctgat gaccatcatg atggcaccgt ttatgtcctg
     1861 cggcgcgcgt ctggctatct tcgcagtatt cgcggctgcc ttcttcgggc agaacggtgc
     1921 gctggcggtc ttctcgctgt atatgctggg tattgtgatg gcggtgctga ctggcctgat
     1981 gctcaagtac accatcatgc gcggtgaagc gacgccgttt gtcatggagt tgccggtcta
     2041 tcatgtacca cacgttaaaa gcctgattat ccagacctgg cagcgtctga aaggcttcgt
     2101 tctgcgtgct ggtaaagtga tcatcatcgt cagcattttc ctgagcgctt tcaacagctt
     2161 ctcgctgagc gggaaaatcg tcgataacat caacgactcg gcgctggcgt ccgtcagccg
     2221 ggtgatcacc ccggtcttca agccaattgg cgtgcatgaa gataactggc aggcaacggt
     2281 tggcctgttt acaggtgcca tggcgaaaga agtggtagtg ggtacgctca acaccctcta
     2341 caccgcagaa aatattcagg acgaagagtt caatccggca gagtttaacc tcggtgaaga
     2401 gctgttcagt gcgatagatg aaacctggca gagcctgaaa gacaccttca gccttagcgt
     2461 actgatgaac cccattgaag ccagcaaagg caacggcgaa atgggtaccg gggcgatggg
     2521 cgtgatggat cagaaattcg gtagcgcagc agcagcttac agctacctga ttttcgtcct
     2581 gctgtatgta ccatgtatct cggtgatggg agccatcgcc cgtgaatcaa gccgtggctg
     2641 gatgggcttc tccatcctgt gggggctgaa tatcgcttac tcgctggcaa cattgttcta
     2701 tcaggtcgcc agctacagtc agcacccaac ttacagcctg gtgtgcattc tggcggttat
     2761 cctgtttaac atcgtggtta tcggtctgct gcgccgcgcg cgtagccggg tggatatcga
     2821 actgctggca acccgcaagt cggtaagcag ttgctgcgca gccagcacca ccggtgattg
     2881 ccattaatgg cttcacttat tcaggtgcgc gatttgctgg cgttacgggg ccgtatggaa
     2941 gcggcccaga taagccagac attgaacact ccacagccaa tgattaacgc catgctgcaa
     3001 caactggaaa gtatgggcaa agccgtgcgg attcaggaag aacctgacgg ctgcctctct
     3061 ggcagttgta aaagctgccc ggaaggaaaa gcctgtctgc gcgagtggtg ggcgcttcgt
     3121 taaccttact ccatcgcctg ttttggaaag cccggtatgc gtctgcatcc gggctttttt
     3181 gcgtgcggct ttccataaaa atgcaactct tgcagcacgg cgtaagttcc tttgaaagca
     3241 tctcgcaggg atgaaaactc gctaatacac aggtgtggag tggcgcgtag agtcgcggca
     3301 ttcaaacaac aggtgaagga acgccatgag caaaaagcag agttccaccc cacacgatgc
     3361 gctgttcaaa ctctttttac gccaaccgga cacggctcgt gattttcttg cgtttcattt
     3421 accggcaccc attcacgcgc tttgtgatat gaaaaccctc aagctggagt cgagcagctt
     3481 tattgatgac gatctgcgtg aaagctattc cgatgtgctg tggtcggtga aaacggaaca
     3541 aggaccagga tacatctatt gtctgattga acatcaaagc acctcaaaca aactgatcgc
     3601 atttcgcatg atgcgttacg ctattgccgc aatgcaaaat caccttgatg ctggatacaa
     3661 aacgttgccg atggtggtgc cattgttgtt ttaccacggt attgaaagcc cctatcccta
     3721 ttcgctgtgt tggctggatt gtttcgccga tcccaaactg gcaaggcagc tttatgcctc
     3781 cgcatttccg ctgattgatg tcaccgtcat gcctgatgat gaaatcatgc agcaccgacg
     3841 tatggcgctg ctggagttaa ttcaaaaaca tattcgtcaa cgcgacctga tggggctagt
     3901 agagcaaatg ggctgcttat taagtagtgg atacgctaat gacagacaaa tcaaagggct
     3961 gtttaattac atactgcaaa ccggcgacgc ggtacgtttt aacgatttta tcgacggcgt
     4021 tgccgaacgt tcaccgaaac acaaggagag tttaatgaca attgcggaaa gattgcggca
     4081 ggagggggaa caatccaaag ccctgcatat agccaaaata atgcttgaat ccggagtccc
     4141 tcttacagac atcatgcgct ttaccggggt gtcagaagaa gagttggctg cggcgagcca
     4201 gtaaatttct gtctcgccat ttcaaaagtt gcctacaccc tctgcttcaa cgccaccagc
     4261 aggtgacaaa actcgaccgg atgcgaaata aacggcgcat gggccgcttt ggcgaagata
     4321 tatgatttgc tgcgaggcca gagtttatcc agcatcggca ccactttgcg cggcaccaga
     4381 ccatcgagat agccatacaa tcgcaaaaac ggcatgggca cgttttgcag cggctgacgg
     4441 agatcaaccg ttttcaggat ttccagcccg ccattaagca cgtcaacctc cggcatcggt
     4501 aacgccagaa cggttttctt caacgcccgc gcatcctggc gcgccgtttc agtccccatg
     4561 gtttgtaacg ccaggaaccg ctccactgta cgctgaaaat catcactgag ttgctgctga
     4621 aatcccgcca gcacgtccgg ttttatcccc ggccaatcgt cacgagcact aaaacaaggt
     4681 gacgacgcca cggtgaccag cgcctgaaca cgctcgggat gggttaacgc aatctggctt
     4741 gccaccagcc cgcccagact ccagcctaac caaatggctt tatcaggtgc ctgttgcagc
     4801 acggcttcgg ccatatcagc aagtgacagc gcaccaaatc cctggctgcg cccgaagccg
     4861 ggcagatcaa caaggtgcag cgtaaaatgc gagctaagtt cctcgtcaat gcaacgccac
     4921 acttcggcat tcagtcccca tccgtgcagc agcacaagat gaacattccc ctgacctttg
     4981 gtctgccacc agatgttatt catccgctat tgttctcttt tgacttacaa ggatgaacat
     5041 atgctaacag taccgggatt atgctggcta tgccgaatgc cgctggcgtt aggtcattgg
     5101 gggatttgtt cggtctgctc acgcgccgcc cgtacagata aaacgttatg cccacaatgt
     5161 ggattacccg ccacacactc acatcttccc tgcggtcgct gcctgcaaaa accaccgccc
     5221 tggcaaagac tggtcacggt tgccgactat gcgccgccgt taagtccgct tatccaccag
     5281 cttaaatttt cccggcgcag tgaaatcgcc agcgccctgt cacgtctgtt actattggaa
     5341 gtcttacacg ctcgtcgcac caccgggttg caattgccgg atcgcatcat cagcgttccg
     5401 ttatggcagc ggcgtcactg gcgtcgggga tttaatcaga gcgatttgct gtgtcagccg
     5461 ttatcacgct ggttgcactg ccgatgggat agcgaagccg tcacacgaac acgggccact
     5521 gcgacccagc attttctcag tgcccggcta cgcaagcgca acctgaaaaa tgcctttcgt
     5581 cttgaattgc ccgtgcaagg tcgccatatg gtgattgtgg atgatgtcgt taccaccgga
     5641 agtaccgtcg cagagattgc gcagttgctt ttacgcaatg gtgcggcgac tgtccaggtc
     5701 tggtgccttt gtcgaacctt gtagagcctc gatgataggc gtattataac caactaaaat
     5761 agtcaactat taggccatta ctatgatccg tatttccgat gctgcacaag cgcactttgc
     5821 caaactgctg gcaaaccagg aagaagggac acaaatccgc gtatttgtga ttaaccctgg
     5881 cacgcctaac gctgaatgtg gtgtttctta ttgtccgccg gatgccgtgg aagccaccga
     5941 cactgccctg aaatttgacc tgctgaccgc gtatgttgat gagttaagcg ctccttacct
     6001 ggaagatgca gagatcgatt ttgttaccga ccagttgggt tctcagctaa cactgaaagc
     6061 gcctaacgcc aaaatgcgta aagtggcaga cgatgcacca ctgatggagc gcgtggagta
     6121 tatgctgcag tcgcagatca acccacagct tgctggtcac ggtggccgcg tttcactgat
     6181 ggaaatcacc gaagacggtt acgccattct gcaatttggc ggcggctgta acggttgttc
     6241 catggtcgat gtgacgctga aagaagggat cgagaagcag ctgctaaacg aattcccgga
     6301 gctgaaaggt gtgcgcgatc tcaccgaaca ccagcgcggc gaacactcct actactaagt
     6361 tatcccctct tttgtagatt gcccgatgcg acgctaaagc gtcatttcgg gcctacgttg
     6421 aacatgtgcc agacgttggc gcagcattgc tttggcaaat ccctcccttc gtttctccgc
     6481 gataatatga ccaacctctc ataatttaaa tttactccgc tctggtgatt ctcaaacgcc
     6541 agatgttacc ggtatcattc acatgggtac caaacatact cctgacatct gactacaata
     6601 attagtttta gtgggtatca gtcgtggtgc cgcaatatct ctgttcccga ttgggataat
     6661 tagagtttgt cgtcagaaaa ttgacgttac ccataacaaa tgaaaggcca ggtaaatcat
     6721 gccattagtc attgttgcta tcggtgtaat cttgttgttg ctcctgatga tccgtttcaa
     6781 aatgaacggc ttcatcgctc tcgtcctcgt ggcgcttgct gttggattaa tgcaagggat
     6841 gccgctggat aaagttattg gctccatcaa agccggtgtc ggcgggacgc tcggtagcct
     6901 tgccctgatc atgggttttg gcgcgatgct gggcaaaatg ctggcagact gcggtggcgc
     6961 acaacgtatc gccaccaccc tgattgccaa atttggtaaa aaacacatcc agtgggcggt
     7021 ggtactgacc ggttttaccg ttggttttgc cctgttctat gaagtgggct ttgtgctgat
     7081 gctgccgctg gtgtttacca tcgcggcttc tgcgaatatt ccactgctgt atgttggtgt
     7141 accaatggca gctgcactgt ctgtgaccca cggcttcctg ccaccgcatc cgggtccgac
     7201 tgcgattgcc accattttca atgccgacat gggtaaaacc ctgctgtacg gtactattct
     7261 ggcaatcccg accgtgattc tcgccggtcc ggtttacgct cgcgtgttga aaggtatcga
     7321 taagccgatc cctgaaggtc tgtacagcgc gaaaaccttc agcgaagaag agatgccgag
     7381 ctttggcgtc agcgtctgga cctctctggt gccggtagtg ctgatggcga tgcgtgcgat
     7441 tgccgaaatg atcctgccga aaggtcacgc tttcctgccg gtagcggagt tcctcggtga
     7501 cccggtaatg gctacgctga ttgccgtgct gattgcgatg ttcacctttg gtctgaaccg
     7561 tggtcgttca atggatcaga ttaacgacac gctggtttct tccatcaaaa tcattgcgat
     7621 gatgctgttg atcatcggtg gtggcggtgc gttcaagcag gtgctggtag acagcggcgt
     7681 ggacaaatac attgcttcca tgatgcacga aaccaacatt tctccgctgc tgatggcctg
     7741 gtcgattgct gccgtactgc gtatcgcgct gggttccgca accgttgcgg caatcactgc
     7801 gggtggtatc gcggcaccgc tgattgcaac gacgggtgtt agcccggagc tgatggttat
     7861 tgcggtgggt tccggtagtg tgattttctc tcatgtgaac gatccgggct tctggctgtt
     7921 caaagagtac tttaacctga ctatcggcga gaccatcaaa tcctggtcga tgctggaaac
     7981 cattatctcg gtgtgcggtc tggtaggctg tctgctgctg aatatggtga tttgataaca
     8041 ctgactgccg gatgcatcgc atccggcatc aaccgcactc tactgcttct tcgctgcagc
     8101 tctgcgccgt ctgtccaaat ccttcagcaa cttattcacg ccatcatcgg caaacatcgt
     8161 ctcaagcgtt gcggaaagct tgcgtcgcca gtttttatac tggtaactgg tgccaggaat
     8221 attcaccggt tcggccatat ccagccagtc ttccggctgt agtcctaaca gagcactgtt
     8281 actgtcggca atgtagcgct gcaaaccacg attaagcgtc ggcgtcatcg acatcaacga
     8341 tgccttatgc ccggcacgtt ttggcagaca accatattta tgcagtgcat ccagcagccc
     8401 ttgcttcgcc agttcgcgat cctgatacag accgcgcagt accacttcat ccggatacag
     8461 ccccagggtt ttgcccaacg ttagatcccc gctctcccag taaccgcgca gcgtaggcag
     8521 gtcatgtgtc gccgcaaccg ccatcgactg ctccggatac gctttcggtg cacggaacgt
     8581 cttctcgtgg tcgttttcga aatagagcac tttgtaggag tacacaccgc tgctgcgcag
     8641 cttaccgaca atctctaccg gtacggtacc gagatcttca ccaatcacca tacagcgatg
     8701 acgtttactt tcgagtgcca gaatcgagag cagatcatcc accggatagt gaacatacgc
     8761 gccctgatct gccatctcgc catacggtat ccaccacaaa cgcagcatcg acatcacatg
     8821 gtcaattcgt aatgcgccgc agttttgcat attggcacgc aacagctcga taaacggttc
     8881 ataggcacgc gcggtgatga tatgcgggtc cattggcggt aatccccagt tctgccccaa
     8941 cgggccgagg atatccggcg gcgcgccaac cgacgctttc aggcaatata gttcacggtc
     9001 acaccaggtt tccgccccac cttccgctac gccaaccgcc agatcacgat acaagccaat
     9061 cggcatttca tagccctggc ttatctccca gcaggcggca aactggctgt aagccagcca
     9121 ctgcaaccag agataaaaat cgacgtcatc acgatgttct tcgcagaact gacgcacttc
     9181 tggtgaatcc acgttctgat acatctctgg ccatgcaggc cagccccagc gcatttcgtc
     9241 ctctttcact tgctgggcat gtagcgcatc aaaggctgcc tgccagaaca ggctgtcgcc
     9301 ctgctctgca acaaactggc gaaacgcggt catctgctca tcatcacgtt gcgcgaaacc
     9361 tttccacgcc attcgtaatg ctgtcatttt tagggcggta accgtggagt aatcgaccca
     9421 gtcggcatcg cgcgcctgtt gcagcgtctg ttgcgtggtc ggcaactgcc accaggcctg
     9481 agcctcttcg ctaagatgga aatcttcaac ggcgttaacg tcgatataaa tcacattcag
     9541 ccaacggcga gaagacggac tgtatgggct ggcactctcc ggatttgccg gatagagcgc
     9601 atgaatcggg ttcaggccga tgaacgaccc gccacgtttt gccacatcca ccagcatcgc
     9661 tttgagatcg ccaaaatccc caatacccca gtttttttcc gatcgcagcg tataaagctg
     9721 aacgcaggca ccccacagct tttgtttatt cagcaacgcc tgcggttcgt aacagcgttt
     9781 cggggcgaca atcacccggc aatgcgcgcg ctggtcgtcc tgggtgagtg tcagcgtgtg
     9841 ataaccttcc ggcagcttcg tcggtagatt gaacgctttg ccccccgtta catggccttt
     9901 gtactgtgtt ccttcttcgg tggtcagcag ccagctatat tcgccgctgc cctccaccac
     9961 catcggcatt tttttgccgc tggtataaac catgacattc gggactggcg ttaccgccac
    10021 tttcgtggcg gtacgttgat gcatcgcgtc aagcaaacgc cgtttggttt cggcgctaat
    10081 cgactgcggt ttaccgtggg cattgatgta attggggcta atccccgccg ccagcgcggc
    10141 attatccaga cgtttgcttt ccatcgagct tccttagcgt tttgcctgcc agatacgagc
    10201 ctgataatcg cgaatagagc gatccgagct aaacataccg cagcgggcgg tattgaggat
    10261 cgccgcgcga gtccaggcct cttggtcgcg gtacagcaca tccacctgct tttgtgcctc
    10321 aacataggct gcgaaatccg ccatcaccag atacggatcg ccgccttgtt tgccgatact
    10381 gtgcagcatc tggtcgaagg catgcttatc gccgtcgctg tatttaccgc tttccagctc
    10441 tttcaatact gcgtccagca ccttatcttt cttccgccat ttcaccgggt cgtagccttt
    10501 ggccagaatt gccttcactt gttccacggt atgaccaaaa ataaagatat tttcttcacc
    10561 gactttctcg gcgatttcaa cgttcgcacc atccagcgta ccgacagtaa gcgcaccatt
    10621 gagcgccagt ttcatattgc cggtaccgga agcttcttta cctgcagtcg aaatttgttc
    10681 ggagatatcc gccgccggga tcagtttttc cgccgccgaa acgcaataat cctgcaggaa
    10741 caccaccttc aacttatcgc caaccagtgg atcgttgttg atcacgtcag ccactttgtt
    10801 gatcgcaaag ataatattct tcgccaggta gtagcccggt gccgctttcg cgccgaagag
    10861 gaagacgcgc ggtacgcgat cagcctgcgg gttttcacga atttctttgt acaacgccag
    10921 aatatgcagc agattcaggt gctggcgttt gtactcatgc agacgtttaa tctgaatatc
    10981 gaaaatcgcc tgtggattga tctcaatacc ggtacgaact ttcacaaact ccgccagacg
    11041 gactttattc gcctgcttga tctcgcgata ttgctgacgg aatttcgcat catcagcgaa
    11101 tttttccaga ttgatcagct gatcgagatc gttagcccac tctttttgca gtaatttatc
    11161 caacagagcc gccagtgcag ggttgcactg tttgatccag cgacgtgggg taataccgtt
    11221 ggtgacgtta tggaatttgt tcggccatag ctggtgatat tccgggaaca gatctttcac
    11281 caccagatcc gagtgcagcg ccgcaacacc gttcaccgcg aaaccgccaa ccacacacag
    11341 gttcgccata tgcacttgtt tatcgtgcac caccgccagt ttggcccaca ctttttcatc
    11401 gcccggccag gttttctcca ccagcgtttt aaagcgagta ttaatttcgt taataatctg
    11461 catatggcgc ggcagtaagc ctttcaccag tttcacatcc cagcgttcca gcgcttctgg
    11521 catcagggta tggttggtgt aagcgaaagt tttgctggta atggcccagg cgtcatccca
    11581 gctcatctgg tgctcatcga tcagcacgcg cagcagttct ggaatcgcga tagttgggtg
    11641 ggtatcgttc agctgaataa cttcataatc cgccagttcg tgcagtttac gccccgccag
    11701 atgatggcga cgcaaaatat ccgctaccga acaggcacac tggaagtact gctgcatcaa
    11761 gcgcagcttt ttaccggcag tatggttgtc gtttggatag agaactttgg tcagtttttc
    11821 cgcattgatg ccctgctgtt cggcacgcag gaaatcaccg tcgttaaatt tagtcagatc
    11881 aaacggatgc gcgtgcgtcg cctgccacag acgcagcggc tgcgccacgc cattacgata
    11941 gccgacaacg gggagatccc acgcttgacc ggtaatggta aactccggct cccagcgtcc
    12001 gtctttcgtc actttaccgc caatccctac ctgcacatcc agtgcttcgt tgtggcggaa
    12061 ccacgggtag ttactgcgat gccagtcatc cggcgcttca acctgtttgc catcgacaaa
    12121 agactggcgg aacaaaccat attgatagtt cagaccgtaa cccgtcgcag actgaccgat
    12181 agttgccatt gagtcgagga agcacgccgc cagacgtccc agaccaccgt tacccagcgc
    12241 cgggtcgatc tcttcttcca gcaggtccgt cagattgatg tcataagcct tcaacgaatc
    12301 ctgtacttcc tgataccagc cgagattcaa caggttgttg cccgtcaggc gaccaatcaa
    12361 aaactccatt gagatgtagt taacatgtcg ctgattcgcc accggcttgg cgaatggctg
    12421 agcacgcagc atttcggcca gtgcttcact cactgctagc caccactggc gaggagtcat
    12481 ttcagccgca gaatttaagc cataacgctg ccactgacgt gaaagcgctt cctgaaattg
    12541 cttatcgtta aaaataggtt gtgacatagg agttccactt ttcttagatt ttcaacacaa
    12601 cgttatcgct agtttgccag gctcgatgtt gaccttcctc atcctgcggg ggattaggca
    12661 gggaggagtt gcggggatga gcaaggaaat gtgatctcaa ccacttaaag ctagtgcaaa
    12721 ccacaggatt agcagcaaat caatgcaata cagcgcagaa aatctgtatc taagtgcaaa
    12781 aaatggccgt tgcgtatttt caaaaagcgg aaggtaactc tataaattaa gtaaaggagt
    12841 gaaacagttt cacaagtaaa atatccagtg tgctccatct cattcttaat agatttatta
    12901 agatcatctt tttagatggc actttcatca ggaatgaaga agaaaccctt gcttaaatga
    12961 atctgatgaa cataagggaa accagtattc acgctggatc agcgtcgttt taggtgagtt
    13021 gttaataaag atttggaatt gtgacacagt gcaaattcag acacataaaa aaacgtcatc
    13081 gcttgcatta gaaaggtttc tggccgacct tataaccatt aattacgaag cgcaaaaaaa
    13141 ataatatttc ctcattttcc acagtgaagt gattaactat gctgattccg tcaaaactaa
    13201 gtcgtccggt tcgactcgac cataccgtgg ttcgtgagcg cctgctggct aaactttccg
    13261 gcgcgaacaa cttccggctg gcgctgatca cgagtcctgc gggctacgga aagaccaccc
    13321 tcatttccca gtgggcggca ggcaaaaacg atatcggctg gtactcgctg gatgaaggtg
    13381 ataaccagca agagcgtttc gccagctatc tcattgccac cgtgcagcag gcaaccaacg
    13441 gtcactgtgc gatatgtgag acgatggcgc aaaaacggca atatgccagc ctgacgtcac
    13501 tcttcgccca gcttttcatt gagctggcgg aatggcatag cccactttat ctggtcatcg
    13561 atgactatca tctgatcact aatccagtga tccacgagtc aatgcgcttc tttattcgcc
    13621 atcaaccaga aaatctcacc ctggtggtgt tgtcacgcaa ccttccgcaa ctgggcattg
    13681 ccaatctgcg tgttcgtgac caactgctgg aaattggcag tcagcaactg gcatttaccc
    13741 atcaggaagc gaagcagttt tttgattgcc gtctgtcatc gccgattgaa gccgcagaaa
    13801 gcagtcggat ttgcgatgac gtttccggtt gggcgacggc actacagcta atcgccctct
    13861 ccgcccggca gaatacccac tcagcccata agtcggcacg ccgcctggcg ggaatcaatg
    13921 ccagccatct ttcggattat ctggtcgatg aggttttgga taacgtcgat ctcgcaacgc
    13981 gccattttct gttgaaaagc gccattttgc gctcaatgaa cgatgcgctc atcacccgtg
    14041 tgaccggcga agaaaacggg caaatgcgtc tcgaagagat tgagcgtcag gggctgtttt
    14101 tacagcggat ggatgatacc ggcgagtggt tctgctatca cccgctgttt ggcaacttcc
    14161 tgcgccagcg ctgccagtgg gaactggcgg cggagctgcc ggaaatccac cgtgccgccg
    14221 cagaaagctg gatggcccag ggatttccca gcgaagcgat tcatcatgcg ctggcggcag
    14281 gcgatgcgct gatgctgcgc gatattctgc ttaatcacgc ctggagtttg ttcaaccata
    14341 gcgaactgtc gctgctggaa gagtcgctta aggccctgcc gtgggacagt ttgctggaaa
    14401 atccgcagtt agtgttattg caggcgtggc taatgcaaag ccaacatcgc tatggcgaag
    14461 ttaacaccct gctagcccgt gctgaacatg aaatcaagga catcagagaa ggcaccatgc
    14521 acgcagaatt taacgctctg cgcgcccagg tggcgattaa cgatggtaat ccggatgaag
    14581 cggaacggct ggcaaaactg gcactggaag agctgccacc gggctggttc tatagccgca
    14641 ttgtggcaac ctcggtgctg ggtgaagtgc tgcactgcaa aggcgaattg acccgctcac
    14701 tggcgctaat gcagcaaacc gaacagatgg cacgccagca cgacgtctgg cactacgcct
    14761 tatggagttt aatccagcaa agtgaaattc tgtttgccca agggttcctg caaaccgcgt
    14821 gggaaacaca ggaaaaagcg ttccagctga tcaacgagca gcatctggaa cagctgccga
    14881 tgcatgagtt tctggtgcgc atccgagcac aactgttatg ggcctgggca cggctggatg
    14941 aagccgaagc gtcggcgcgt agcgggattg aagtcttgtc gtcttatcag ccacagcaac
    15001 agcttcagtg cctggcaatg ttgattcaat gctcgctggc ccgtggtgat ttagataacg
    15061 cccgtagcca gctgaaccgt ctggaaaacc tgctggggaa tggcaaatat cacagcgact
    15121 ggatctctaa cgccaacaaa gtccgggtga tttactggca aatgaccggc gataaagccg
    15181 ccgctgccaa ctggttgcgt catacggcta aaccggagtt tgcgaacaac cacttcctgc
    15241 aaggtcaatg gcgcaacatt gcccgcgcac aaatcttgct gggcgagttt gaacctgcgg
    15301 aaattgttct cgaagaactc aatgaaaatg cccgcagtct gcggttgatg agcgatctca
    15361 accgtaacct gttgctgctt aatcaactgt actggcaggc cggacgtaaa agtgacgccc
    15421 agcgcgtgtt gctggacgca ttaaaactgg cgaatcgcac cggatttatc agtcattttg
    15481 tcatcgaagg cgaagcgatg gcgcaacaac tgcgccagct gattcaactc aatacgctgc
    15541 cggaactgga acagcatcgc gcgcagcgta ttctgcgaga aatcaatcaa catcatcggc
    15601 ataaattcgc ccatttcgat gagaatttcg ttgaacgtct gctaaatcat ccggaagtgc
    15661 cagaactgat ccgcaccagc ccgttgaccc aacgtgaatg gcaggtcctg gggctgatct
    15721 actccggtta cagcaatgag caaattgcgg gcgagctgga agtggcggca accaccatca
    15781 agacgcatat ccgcaatctg taccaaaaac tcggcgtcgc ccaccgtcag gccgcggtac
    15841 aacacgcgca gaaactgctg aagatgatgg gatatggggt gtgagtttag ccggataatg
    15901 cattggatcc ggtttacatc tttacatcat tcaatactca cccgcgttac gccatctatt
    15961 tctatcaaac caaaccgcac cggcaagaaa cgctccacca cggcgatatt ggtcagcaaa
    16021 tggcatgaag gatgggcgac cgtaaattct cccgcgcccg ccagcgccat cggtagcacc
    16081 agctggtcgg cgagatattc ccccactgcc gccgggcttg ccaggtagcg tttcacctct
    16141 ttcactaact gcgcggctac cacctcggca ctgacgcgct tttcaccgac gacgaaaaag
    16201 cgttcagtga tattttcact ttcgacttcc agcgagacgg tattacccgg cccctggtcg
    16261 cgcggcaggt tatgaatatt ctgttcatgc agggaaaaac tccccgccag tgtagcgatt
    16321 tcacgctcag caacatggcg cggcacacca gctaatagaa cttctccacg catctgcaca
    16381 atgttcccgc gctcgccaag ttgcaaggtg ttaaacgatg ccacgggcga gacttccgtt
    16441 gccaccacgc cgcctccggc aggataaaaa ccgtgacgta acagcgtggt ttgctgatga
    16501 attcctattt tcgccagcag cggctccagc acccggcgga taaaatccgc aggcggcgcc
    16561 gacgggttat cggtgcctcc gctcacttca acacgcgaag gtccatcggc aaaccacagc
    16621 gcgggcagca ccgtttgcag caccagcgta cagcttccgg cactaccgat agcaaagcgg
    16681 tactcgccgc cgcgcacggc gccaggccgg aagaccagac gctgcgaccc cagctccgcg
    16741 ccttccaccg ttgccctaca aatttccgca gccgctttta ccgcggtcag atgctggcgc
    16801 aacagccccg gtttcgcccg cccggcacga atgctggtga tggtaaatgg ctggccggtt
    16861 atcatcgaca ggctcagcgc cgagcgcaga atctgcccgc caccttcgcc ctgtgcgcca
    16921 tccagcgcaa tcatcctttt catcatttat ccttttacgc acaccacctg acgcagggta
    16981 tagataactt ccaccagatc gctttgtgcc gtcatcaccg catcaatatc tttatacgcc
    17041 atcgggattt cgtcgatcac ttcggcatct ttacggcatt ccacatgcgc ggtggcacga
    17101 atttgatctt ccacgctgaa cagttttttc gctttagttc ggctcattac ccgcccggca
    17161 ccgtggctgc acgaacagaa cgactcttca tttcccagcc cacggacgat aaagcttttt
    17221 gctcccatcg aaccgggaat aattccatat tgaccagcac gcgcagacac cgcgccttta
    17281 cgcgtcacgt agatctcttc accaaagtgc tgttcttttt gcacatagtt gtggtgacag
    17341 ttgatctctt ccatcgccag cgtttgtggc tgtctgaccg ttttctgcgt aatgctctgc
    17401 aatgccgtta ccacgttttc catcatcaca tcgcggttaa ggctggcaaa aagctgcgcc
    17461 caggccacgg ctttcaggta atcatcaaag tattccgtac cttccataaa gtacgccaga
    17521 tcacgcgacg gcaacgtctc aagcgtttcc tgcatctctt tttgtgccag atcgataaag
    17581 taagtcccga tggcgttacc aattccgcgt gaaccggagt gcagcataat ccacacctgg
    17641 tccgactcat caaggcagat tttaataaag tggttaccgg ttcccagcgt tcccaggtgt
    17701 ttatagttat tggtattcag gaaacgggga tatttttgcg ttaaccactg ataaccggct
    17761 tcaagctcag cccatttcgc atcgacgttg acaggcgggt tttcccatgc gcctttatca
    17821 cgtttacaac gcccggtagt acgcccgtgc ggcacggccg tttcaatcgc ctgacgcagc
    17881 tctgccaggt tttcaggcag gtcttccgcc gttaacgcgg tacgcagcgc gttcattcca
    17941 cagccaatat ccacgcccac cgccgccgga ataatcgccc ctttggtcgg gatcacgcta
    18001 ccaatggtgg aatctttacc caggtgtaca tcaggcatta ccgcaatatg tttgaaaata
    18061 aacggcatct tcgccgtatt aataagttgc tgacgcgcat cggcttctac cggcacgcct
    18121 ttggtccaca tttttaccgg ggcattttca gtggtcagta attcgtaatt cattttgttt
    18181 ttctcttttc gttgtttgct gtcctgataa ttgcaaccgt cgtgccagaa aattaaataa
    18241 gtaaattaat tttttaattc attgttttta aaaagattat atctttatgt ccgtaaccgg
    18301 agatttcccg caaagccgat ttaccgataa tgaaatatcg tcttttataa ggatatctaa
    18361 gatgcgtaaa acagtagctt ttggctttgt cggaacggtg ctggattatg ccgggcgcgg
    18421 cagtcagcgc tggtcaaaat ggcatccgac actctgttta tgccagcaag aatcgttggt
    18481 catcgatcga ctggaattat tgcatgacgc ccgctcgtgc tcgctatttg aaacgcttaa
    18541 acgcgatatc gccagcgttt cgccagaaac agaagtggtg agcattgaga ttgaactgca
    18601 taacccgtgg gatttcgaag aggtttacgc ctgcctgcat gatttcgccc gtggttacaa
    18661 gtttcagcca gaaaaagaag actatttaat tcacatcacc accggcaccc acgtcgcgca
    18721 gatttgctgg tttctgctgg cggaagcgcg ttatctaccc gcccggttga tacaaacttc
    18781 accaccgcgc aaaaaagaac aaccgcgcgg tgccggtgaa gtgacgatta tcgatctcga
    18841 tctaagccgt tataacgcca tcgccagccg ctttgccgag gaacgccagc aaacgcttga
    18901 ttttcttaag tccggcattg ccacgcgtaa cccccacttc aaccgcatga ttgagcagat
    18961 tgaaaaagtg gcgattaaat cccgcgcacc gatcctgctt aacggcccaa ccggtgcggg
    19021 aaagtcattt ctggcgcgac gtatatttga attaaaacag gcgcggcatc agtttagcgg
    19081 cgcgtttgtg gaagtgaact gcgccaccct gcgcggcgat accgccatgt cgacgctgtt
    19141 tggtcatgtg aaaggcgcgt ttaccggggc gcgggaatct cgtgaaggtt tattacgcag
    19201 cgccaacggc ggaatgttgt tttttgatga gattggcgaa ctgggcgcag acgaacaggc
    19261 aatgctgcta aaagccattg aagagaaaac cttttacccg tttggcagcg atcgccaggt
    19321 gagcagtgat tttcagctta tcgccggaac ggtgcgcgat ttgcgccagc tggttgccaa
    19381 aggcaaattt cgcgaagatc tgtacgcgcg gatcaatctc tggaccttca ccctgccggg
    19441 tctacgccag cgccaggaag atattgaacc gaaccttgat tatgaagtgg agcgccacgc
    19501 cacactcact ggcgacagcg tgcgttttaa caccgaagcg cggcgcgcct ggttggcttt
    19561 tgcgacctct ccccaggcaa catggcgcgg taactttcgc gaactttctg ccagcgtcac
    19621 gcggatggcc acctttgcca ctagcggacg catcactctg gacgtggttg aagatgagat
    19681 aaaccgtctg cgctataact ggcaggagag ccgcccctcc gcgcttacgg cgttgctggg
    19741 cgcagaggca gaaaacatcg atctcttcga ccgtatgcaa ctggaacacg ttatcgctat
    19801 ctgccgccag gcaaagtcgc tttctgcaac cggacgacag ctttttgatg tttcgcgcca
    19861 gggaaaagcc agcgtcaatg acgcggatcg gctacgcaaa tacctggcgc gttttggtct
    19921 gacgtgggaa gccgtgcagg atcagcacag ctccagttga atatgatggt ccgtcagcac
    19981 ctgcattacg cttactggcg gcggggcgtc ggtgtagacg gcatctacca tgctgatgct
    20041 gcccatattg accatcgcgt tacggccaaa tttcgagtga tcgacaacca gcataacgtg
    20101 gcgcgagttc tcaataatgg cgcgcttggt gcgaacttcg tggtaatcga actccagcag
    20161 cgagccgtcg ctatcgatgc cgcttatccc cagaatgccg aaatcaaggc ggaactggga
    20221 gataaaatcg agcgtcgctt cgccaatgat cccgccatcg cggctgcgta attcgccacc
    20281 agcgagaata atgcggaaat cttcttttac catcaacgtg ttagcaacat tgagattgtt
    20341 ggtgacaata cgcaaattgc tgtgattaag cagcgcgtgc gccaccgctt ccggcgtggt
    20401 gccgatatcg ataaacagtg tcgagccgtt ggggatttgc tccgccactt tgcgggcaat
    20461 cctctctttt tcttcggtct gggtggcttt gcgatcgtgc cacggcgtgt taaccgaact
    20521 ggaaggcagc gccgcaccgc catggtgacg caggatcagg ttttgctccg ccagctcatt
    20581 gaggtcgcgg cgaatagtct gcgggctgac ggagaaatgc tctaccagct cttcagtact
    20641 gacataaccc tgctgtttaa ccagttcgat aataccgttg tgacgttgtg tttgtttcat
    20701 ttataaatcc ctggaattat tttcgttttc gcgcattgag cgaatcaaca aaagccatcg
    20761 ctaaacccac ggctaacccg gcgatgtgtg ctccgttcgc catcgacatc ccaaacaaat
    20821 caaaccatcc ggcgataatc cagatcagcg caaagataat taacccacgt tgcaggtaaa
    20881 tgccactttg cggatcgcgc tcaccacgta gccagacgta gcccatcagc gcatacacca
    20941 cgccagaaag cccgccaaac cacggcccgc tgaatttttg ctgcacatag ccgcttaaca
    21001 gggcactaat gagagtaata acaattagct taccgctacc gaggcgtttt tccaccgcac
    21061 cgccgagata ccaccaccag agcaggttaa agaggatatg catcagcgag aagtgcatta
    21121 acgcgtgggt gaagtaacgc cagaactcaa atttcagtgt tggatcgaat ggccaggcca
    21181 gccataacat cacttcctga tcgccgagaa tttgcatggc gataaacacc accacgcagg
    21241 cgatcatcac cacccaggtt accggacctg cgcgttcacg caaggcagca aagaaaggat
    21301 aacggcgata atgcagacca ctgccggtat ggcccgcctg ccagctggcc gccagataac
    21361 gcggatctgc cgggttttcg agaaaacgcg ccagctccgc ccgcacgcgc tcggcctggg
    21421 actcatccgc cagccagaca tcgctttggt tatgttgttg aatcgtaagg ataacaccct
    21481 gcgtcgccat gtaatcaaca aacgcctgcg ccacgcgggg gttagcaaaa gaggtaatca
    21541 tcaacatcgt tgctgtcgct tattccacac aaaaggggac agtataaagc gttacgcgcc
    21601 gtacgccacc tctgcgggaa actgacgctg ccaggcttca aaaccgccgt caatgctata
    21661 gaccacatcg tagccctgtt gcagcagata ctgcgccgcg cctttgctgc tattgccgtg
    21721 ataacacatc accatcaccg gagtgtcaaa gtcgttatca cgcataaacg cgcccagcgt
    21781 gtcgttggtt aaatggaaag cctgcaccgc atgtcccatt gcgaaactct gtggatcgcg
    21841 aatatcgacc agcaccgcct ctttttcctg caacttctgg tgcgcgtcgg caacgttaat
    21901 acattcgaac agatccatgc gtctctcttt ctttacaaac aagtgggcaa atttaccgca
    21961 cagtttacgt cgaagcggca gataaacgcc ataatgttat acatatcact ctaaaatgtt
    22021 ttttcaatgt tacctaaagc gcgattcttt gctaatatgt tcgataacga acatttatga
    22081 gctttaacga aagtgaatga gggcagcatg gaaaccaaag atctgattgt gataggtggc
    22141 ggcatcaatg gtgctggtat cgcggcagac gccgctggac gcggtttatc cgtgctgatg
    22201 ctggaggcgc aggatctcgc ttgcgcgacc tcttccgcca gttcaaaact cattcacggt
    22261 ggcctgcgct accttgagca ctatgaattc cgcctggtca gcgaggcgct ggctgaacgt
    22321 gaagtgctgc tgaaaatggc tccgcatatc gccttcccaa tgcgttttcg cctgccacat
    22381 cgtccgcatc tgcgcccggc gtggatgatt cggattggtc tgtttatgta cgatcatctg
    22441 ggtaaacgca ccagcctgcc gggatcaacc ggtttgcgtt ttggcgcaaa ctcagtgtta
    22501 aaaccggaaa ttaagcgcgg attcgaatat tctgactgtt gggtagacga cgcccgtctg
    22561 gtactcgcca acgcccagat ggtggtgcgt aaaggcggcg aagtgcttac tcggactcgc
    22621 gccacctctg ctcgccgcga aaacggcctg tggattgtgg aagcggaaga tatcgatacc
    22681 ggcaaaaaat atagctggca agcgcgcggc ctggttaacg ccaccggccc gtgggtgaaa
    22741 cagttcttcg acgaggggat gcatctgcct tcgccttatg gcattcgcct gatcaaaggc
    22801 agccatattg tggtgccgcg tgtgcatacc cagaagcagg cctacattct gcaaaacgaa
    22861 gataaacgta ttgtgttcgt gatcccgtgg atggacgaat tttccatcat cggcaccacc
    22921 gacgtagagt ataaaggcga tccgaaagcg gtgaagattg aagagagtga aatcaactat
    22981 ctgctgaaag tgtataacgc gcactttaaa aaacagctta gccgtgacga tatcgtctgg
    23041 acctactccg gtgtgcgtcc gctgtgtgat gatgagtccg actcgccgca ggctattacc
    23101 cgtgattaca cccttgatat ccatgatgaa aacggcaaag caccgctgct gtcggtattc
    23161 ggcggtaagc tgaccaccta ccgaaaactg gcagaacatg cgctggaaaa actgacgccg
    23221 tattatcagg gtattggccc ggcgtggacg aaagagagcg tgctgccggg tggtgccatt
    23281 gaaggcgacc gcgacgatta cgcagctcgt ctgcgccgtc gctatccatt cctgactgaa
    23341 tcgctggcgc gtcattacgc acgcacttac ggcagcaaca gcgagctgct gctcggcaat
    23401 gcgggggcga taagcgacct cggggaggat ttcggtcatg agttctacga agcggaactg
    23461 aaatacctgg tggatcacga atgggtccgc cgcaccgacg atgccctttg gcgtcgcaca
    23521 aaacaaggca tgtggctgaa tgcggatcaa caatctcgtg tgagtcagtg gctggtggaa
    23581 tatacgcagc agaagttgtc gctggcgtcg taaggatgat gcccggttga agtgcaaccg
    23641 ggctatttgg attccttaga ctattcattg taaataattg aataacggcc cctgagctaa
    23701 aatcgccaaa cttaagcacg ttacccaatc gccccacttc ttcctctggt ttctattttt
    23761 tctgcaccaa tggcaataat atcccaatgc aaaaccaagc tgtgcactaa tcgggccgac
    23821 aaaatcagtc caaggctgcg gccaaaaagg ggaaaaattc aggggaggcc agacaaacgt
    23881 cagaaagaaa tttcggatat tttccagcaa cgctgatttc tctggagaaa tataaagaat
    23941 gaaattcgag agaattaacc agaaatagac cggcgaaaag accagccagc aatgcagtct
    24001 gttttttaat tcaggaggcg ttctgcggga gaattgccaa ccgatgccag ccattacac
//
LOCUS       DADMJE010000051        23495 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.052, whole genome shotgun sequence.
ACCESSION   DADMJE010000051 DADMJE010000000
VERSION     DADMJE010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23495
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.052"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(300..614)
                     /gene="pspE"
                     /locus_tag="JN001_001828"
     CDS             complement(300..614)
                     /gene="pspE"
                     /locus_tag="JN001_001828"
                     /EC_number="2.8.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase PspE"
                     /protein_id="HAY9053084.1"
                     /translation="MFKKGLLALALVFSLPVFAAEHWIDVRVPEQYQQEHVQGAINIP
                     LKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGGLKDIAMPKV
                     KG"
     gene            complement(689..910)
                     /gene="pspD"
                     /locus_tag="JN001_001829"
     CDS             complement(689..910)
                     /gene="pspD"
                     /locus_tag="JN001_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspD"
                     /protein_id="HAY9053085.1"
                     /translation="MNTRWQQAGQKVKPGFKLAGKLVLLTALRYGPAGVAGWAIKSVA
                     RRPLKMLLAVALEPLLSRAANKLAQRYKR"
     gene            complement(919..1278)
                     /gene="pspC"
                     /locus_tag="JN001_001830"
     CDS             complement(919..1278)
                     /gene="pspC"
                     /locus_tag="JN001_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspC"
                     /protein_id="HAY9053086.1"
                     /translation="MAGINLNKKLWRIPQQGMVRGVCAGIANYFDVPVKLVRILVVLS
                     IFFGLALFTLVAYIILSFALDPMPDNMAFGEQLPSSSELLDEVDRELAASETRLREME
                     RYVTSDTFTLRSRFRQL"
     gene            complement(1278..1502)
                     /gene="pspB"
                     /locus_tag="JN001_001831"
     CDS             complement(1278..1502)
                     /gene="pspB"
                     /locus_tag="JN001_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response membrane protein PspB"
                     /protein_id="HAY9053087.1"
                     /translation="MSALFLAIPLTIFVLFVLPIWLWLHYSNRSGRSELSQSEQQRLA
                     QLADEAKRMRERIQALESILDAEHPNWRDR"
     gene            complement(1556..2224)
                     /gene="pspA"
                     /locus_tag="JN001_001832"
     CDS             complement(1556..2224)
                     /gene="pspA"
                     /locus_tag="JN001_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein PspA"
                     /protein_id="HAY9053088.1"
                     /translation="MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVR
                     STSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIK
                     SLEHEVTLVDDTLARMKKESGELENKLSETRARQQALMLRHQAANSSRDVRRQLDSGK
                     LDEAMARFESFERRIDQMEAEAESHSFGKQKSLDDQFAELKADDAISEQLAQLKAKMK
                     QDNQ"
     gene            2391..3368
                     /gene="pspF"
                     /locus_tag="JN001_001833"
     CDS             2391..3368
                     /gene="pspF"
                     /locus_tag="JN001_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309907.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage shock protein operon transcriptional
                     activator"
                     /protein_id="HAY9053089.1"
                     /translation="MAEYKDNLLGEANSFLEVLEQVSHLAPLDKPVLIIGERGTGKEL
                     IASRLHYLSSRWQGPFISLNCAALNENLLDSELFGHEAGAFTGAQKRHPGRFERADGG
                     TLFLDELATAPMMVQEKLLRVIEYGELERVGGSQPLQVNVRLVCATNADLPATVNEGT
                     FRADLLDRLAFDVVQLPPLRERESDIMLMAEHFAIQMCREIKLPLFPGFTERARETLL
                     NYRWPGNIRELKNVVERSVYRHGTSDYPLDDIIIDPFKRRPPEDAIAVSETTSLPTLP
                     LDLREFQMQQEKELLQLSLQQGKYNQKRAAELLGLTYHQFRALLKKHQI"
     gene            complement(3488..4753)
                     /gene="puuE"
                     /locus_tag="JN001_001834"
     CDS             complement(3488..4753)
                     /gene="puuE"
                     /locus_tag="JN001_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate transaminase"
                     /protein_id="HAY9053090.1"
                     /translation="MSNNEFHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYID
                     FAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLAEKINALAPVSGQA
                     KTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGP
                     FPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPK
                     ELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDLMTMAKSLAGGMPLS
                     GVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL
                     IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYG
                     NVIRFLYPLTIPDAQFDAAMKILQDALSD"
     gene            complement(4791..6023)
                     /locus_tag="JN001_001835"
     CDS             complement(4791..6023)
                     /locus_tag="JN001_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004984233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HAY9053091.1"
                     /translation="MPFDTLNESITCDVCVVGGGYTGLSSALHLAEAGFDVVVLEASR
                     IGFGASGRNGGQLVNSYNRDIDVIEKSYGMDTAPMLGSMMFEGGEIIRERIKRYQIDC
                     DYRPGSLFVAMNDKQLATLEEQKENWERYGNKQLELLDANAIRREVASDRYTGALLDH
                     SGGHIHPLNLAIGEADAIRLNGGRVYELSAVTQIQHTTPAVVRTAKGQVTAKYVIVAG
                     NAYLGDKVEPELAKRSMPCGTQVITTERLSEDLARSLIPKNYCVEDCNYLLDYYRLTA
                     DNRLLYGGGVVYGARDPDDVERLVVPKLLKTFPQLKGVKIDYRWTGNFLLTLSRMPQF
                     GRLDTNIYYMQGYSGHGVTCTHLAGRLIAELLRGDAERFDAFANLPHYPFPGGRTLRV
                     PFTAMGAAYYSLRDRLGV"
     gene            complement(6062..7549)
                     /gene="puuC"
                     /locus_tag="JN001_001836"
     CDS             complement(6062..7549)
                     /gene="puuC"
                     /locus_tag="JN001_001836"
                     /EC_number="1.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase PuuC"
                     /protein_id="HAY9053092.1"
                     /translation="MNFHHLAYWQDKALSLAIENRLFINGEYTAAAENETFETVDPVT
                     QAPLAKIARGKSVDIDRAVSAARGVFERGDWSLSSPAKRKAVLNKLADLMEAHAEELA
                     LLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGV
                     IAAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLVGLAKEAGLPDGVLN
                     VVTGFGHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIV
                     FSDCSDLQKAASSTAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHP
                     LDPATTMGTLIDCAHADSVHSFIREGEGKGQLLLDGRNAGLAAAIGPTIFVDVDPNAS
                     LSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWMRDLSRAHRMSRRLKAGSVF
                     VNNYNDGDMTVPFGGYKQSGNGRDKSLHALEKFTELKTIWISLEA"
     gene            complement(7824..8381)
                     /gene="puuR"
                     /locus_tag="JN001_001837"
     CDS             complement(7824..8381)
                     /gene="puuR"
                     /locus_tag="JN001_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001464354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator PuuR"
                     /protein_id="HAY9053093.1"
                     /translation="MSDEGLAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDK
                     VSPAISTLQKLLKVYGLSLSEFFSEPEKPDEPQVVINQDDLIEMGSQGVSMKLVHNGN
                     PNRTLAMIFETYQPGTTTGERIKHQGEEIGTVLEGEIVLTINGQDYHLVAGQSYAINT
                     GIPHSFSNTSAGICRIISAHTPTTF"
     gene            complement(8408..9171)
                     /gene="puuD"
                     /locus_tag="JN001_001838"
                     /pseudo
     CDS             complement(8408..9171)
                     /gene="puuD"
                     /locus_tag="JN001_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415814.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase"
     gene            9383..10801
                     /locus_tag="JN001_001839"
     CDS             9383..10801
                     /locus_tag="JN001_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase"
                     /protein_id="HAY9053094.1"
                     /translation="METNIVEVENFVQQPEERRGSAFTQEVKRYLERYPNTQYVDVLL
                     TDLNGCFRGKRIPVSSLKKLEKGCYFPASVFAMDILGNVVEEAGLGQEMGEPDRTCVP
                     VLGSLTPSAADPEFIGQMLLTMVDEDGAPFDVEPRNVLNRLWQQLRQRGLFPVVAVEL
                     EFYLLDRQRDAEGYLQPPCAPGTDNRNTQSQVYSVDNLNHFADVLNDIDELAQLQLIP
                     ADGAVAEASPGQFEINLYHTDNVLEACDDALALKLLVRLMAEKHKMHSTFMAKPYEEH
                     AGSGMHIHISMQNNRGENVLSDTEGEDSPLLKKMLAGMIDLMPSSMALLALNVNSYRR
                     FQPGMYVPTQASWGHNNRTVALRIPCGDRHNHRVEYRVAGADANPYLVMAAIFAGILH
                     GLDNELPLQEEVEGNGLEQEGLPFPIRQSDALGEFIENDHLRRYLGERFCHVYHACKN
                     DELLQFERLITETEIEWMLKNA"
     gene            10950..11115
                     /locus_tag="JN001_001840"
                     /pseudo
     CDS             10950..11115
                     /locus_tag="JN001_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518772.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            11105..12490
                     /gene="puuP"
                     /locus_tag="JN001_001841"
     CDS             11105..12490
                     /gene="puuP"
                     /locus_tag="JN001_001841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415812.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine/proton symporter PuuP"
                     /protein_id="HAY9053095.1"
                     /translation="MAINSPLNIAAQPGKTRLRKSLKLWQVVMMGLAYLTPMTVFDTF
                     GIVSGISDGHVPASYLLALAGVLFTAISYGKLVRQFPEAGSAYTYAQKSINPHVGFMV
                     GWSSLLDYLFLPMINVLLAKIYLSALFPEVPPWVWVVTFVAILTAANLKSINLVANFN
                     TLFVLVQISIMVVFIFLVVQGLHKGEGVGTVWSLQPFISENAHLIPIITGATIVCFSF
                     LGFDAVTTLSEETPDAARVIPKAIFLTAVYGGVIFIAASFFMQLFFPDISRFKDPDAA
                     LPEIALYVGGKLFQSIFLCTTFVNTLASGLASHASVSRLLYVMGRDNVFPERVFGYVH
                     PKWRTPALNVIMVGIVALSALFFDLVTATALINFGALVAFTFVNLSVFNHFWRRKGMN
                     KSWKDHFHYLLMPLVGALTVGVLWVNLESTSLTLGLVWASLGGAYLWYLIRRYRKVPL
                     YDGDRTPVSET"
     gene            12624..12869
                     /locus_tag="JN001_001842"
     CDS             12624..12869
                     /locus_tag="JN001_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmjA family protein"
                     /protein_id="HAY9053096.1"
                     /translation="MNHDIPLKYFDIADEYATECAEPVADAERTPLAHYFQLLLTRLM
                     NNEEISEEAQHEMAAEAGINPVRIDEIAEFLNQWGNE"
     gene            13182..14825
                     /gene="sapA"
                     /locus_tag="JN001_001843"
     CDS             13182..14825
                     /gene="sapA"
                     /locus_tag="JN001_001843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein SapA"
                     /protein_id="HAY9053097.1"
                     /translation="MRQVLSSLLVIAGLVSGQAIAAPESPPHADIRDSGFVYCVSGQV
                     NTFNPSKASSGLIVDTLAAQFYDRLLDVDPYTYRLMPELAESWEVLDNGATYRFHLRR
                     DVPFQKTDWFTPTRKMNADDVVFTFQRIFDRNNPWHNVNGSNFPYFDSLQFADNVKSV
                     RKLDNHTVEFRLAQPDASFLWHLATHYASVMSAEYARKLEKEDRQEQLDRQPVGTGPY
                     QLSEYRAGQFIRLQRHDDFWRGKPLMPQVVVDLGSGGTGRLSKLLTGECDVLAWPAAS
                     QLSILRDDPRLRLTLRPGMNVAYLAFNTAKPPLNNPAVRHALALAINNQRLMQSIYYG
                     TAETAASILPRASWAYDNEAKITEYNPAKSREQLKALGLENLTLKLWVPTRSQAWNPS
                     PLKTAELIQADMAQVGVKVVIVPVEGRFQEARLMDMSHDLTLSGWATDSNDPDSFFRP
                     LLSCAAIHSQTNLAHWCDPKFDSVLRKALSSQQLAARIEAYDEAQSILAQELPILPLA
                     SSLRLQAYRYDIKGLVLSPFGNASFAGVYREKQDEVKKP"
     gene            14822..15787
                     /gene="sapB"
                     /locus_tag="JN001_001844"
     CDS             14822..15787
                     /gene="sapB"
                     /locus_tag="JN001_001844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapB"
                     /protein_id="HAY9053098.1"
                     /translation="MIIFTLRRILLLIVTLFLLTFVGFSLSYFTPHAPLQGASLWNAW
                     VFWFNGLIHWDFGVSSINGQPIAEQLKEVFPATMELCILAFGFALIVGIPVGMIAGIT
                     RHKWQDNLINAIALLGFSIPVFWLALLLTLFCSLTLGWLPVSGRFDLLYEVKPITGFA
                     LIDAWLSDSPWRDEMIMSAIRHMILPVITLSVAPTTEVIRLMRISTIEVYDQNYVKAA
                     ATRGLSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLINAI
                     RQQDYAAISAGVMVCGSLVIIVNVISDILGAMANPLKHKEWYALR"
     gene            15774..16664
                     /gene="sapC"
                     /locus_tag="JN001_001845"
     CDS             15774..16664
                     /gene="sapC"
                     /locus_tag="JN001_001845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter permease SapC"
                     /protein_id="HAY9053099.1"
                     /translation="MPYDSVYSEKRPPGTLRTAWRKFYSDASAMVGLYGCAGLAVLCI
                     FGGWFAPYGIDQQFLGYQLLPPSWSRYGEVSFFLGTDDLGRDVLSRLLSGAAPTVGGA
                     FVVTLAATICGLVLGTFAGATHGLRSAVLNHILDTLLAIPSLLLAIIVVAFAGPSLSH
                     AMFAVWLALLPRMVRSIYSMVHDELEKEYVIAARLDGASTLNILWFAVMPNITAGLVT
                     EITRALSMAILDIAALGFLDLGAQLPSPEWGAMLGDALELIYVAPWTVMLPGAAIMIS
                     VLLVNLLGDGVRRAIIAGVE"
     gene            16664..17656
                     /gene="sapD"
                     /locus_tag="JN001_001846"
     CDS             16664..17656
                     /gene="sapD"
                     /locus_tag="JN001_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapD"
                     /protein_id="HAY9053100.1"
                     /translation="MPLLDIRNLTIEFKTGDEWVKAVDRVSMTLTEGEIRGLVGESGS
                     GKSLIAKAICGVNKDNWRVIADRMRFDDIDLLRLSARERRKLVGHNVSMIFQEPQSCL
                     DPSERVGRQLMQNIPAWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRSFPYELT
                     EGECQKVMIAIALANQPRLLIADEPTNSMEPTTQAQIFRLLTRLNQNSNTTILLISHD
                     LQMLSQWADKINVLYCGQTVETAPSKELVTMPHHPYTQALIRAIPDFGSAMPHKSRLN
                     TLPGAIPLLEQLPIGCRLGPRCPYAQRECIVTPRLTGAKNHLYACHFPLNMEKE"
     gene            17658..18464
                     /gene="sapF"
                     /locus_tag="JN001_001847"
     CDS             17658..18464
                     /gene="sapF"
                     /locus_tag="JN001_001847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter ATP-binding protein
                     SapF"
                     /protein_id="HAY9053101.1"
                     /translation="MIETLLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLA
                     IIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYSFRSQRIRMIFQDPSTSLN
                     PRQRISQILDFPLRLNTDLEPEQRRKQIIETMRMVGLLPDHVSYYPHMLAPGQKQRLG
                     LARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHIGMMKHIS
                     DQVLVMHQGEVVERGSTADVLASPLHELTKRLIAGHFGEALTADAWRKDR"
     gene            18532..18885
                     /locus_tag="JN001_001848"
     CDS             18532..18885
                     /locus_tag="JN001_001848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HAY9053102.1"
                     /translation="MMDKIKSNARDLRRNLTLQERKLWRYLRSRRFGDFKFRRQHPVG
                     SYILDFACCSARVVVELDGGQHDLAVAYDTRRTSWLESQGWTVLRFWNNEIDCNEEAV
                     LEIILQELNRRSPSP"
     gene            19253..20041
                     /gene="fabI"
                     /locus_tag="JN001_001849"
     CDS             19253..20041
                     /gene="fabI"
                     /locus_tag="JN001_001849"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HAY9053103.1"
                     /translation="MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKL
                     KGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDG
                     DYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMG
                     LAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRR
                     TVTIEDVGNSAAFLCSDLSAGISGEVVHVDGGFSIAAMNELELK"
     gene            20186..21313
                     /locus_tag="JN001_001850"
     CDS             20186..21313
                     /locus_tag="JN001_001850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309887.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CMD domain-containing protein"
                     /protein_id="HAY9053104.1"
                     /translation="MEQRHITGKSHWYHETQSSTAEYDVLPLVPEAAKVSDPFLLDVI
                     LDEETLAPFLSWLVPARVLAVELFPDQLTVTRSQTFTAYERLSTALTVAQVCGVQRLC
                     NYYSARLTPLPGPDSSRESNHRLAQITQYARQLASSPSIIDNRSRQHLNDVGLTARDC
                     VIINQIIGFIGFQARTIATFQAYLGHPVRWLPGLEIQNYADASLFADESIRWRSSYEV
                     EKLPEEYTKSSTAELCQLAETLSLHPISLSLLERLLNSTRVNTQPDNKLAALLCARIN
                     GSPACFAACMDSSNEYKKISPLLRKGENEINQWADRHSVEHATVQAIQWLTRAPDRFS
                     TAQFSPLLEHEQSSTQIINLLVWSGLCGWINRLKIALGETY"
     gene            21381..23315
                     /gene="rnb"
                     /locus_tag="JN001_001851"
     CDS             21381..23315
                     /gene="rnb"
                     /locus_tag="JN001_001851"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exoribonuclease II"
                     /protein_id="HAY9053105.1"
                     /translation="MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSY
                     FIPPPQMKKVMHGDRIIAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPD
                     HPLLKDAIPCRAARGLNHEFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVP
                     WWVTLARHNLEKEAPDGVATEMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALP
                     DDKLQLIVAIADPTAWIAEGSKLDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRAN
                     EVRPVLACRMTLSADGAIEDNIEFFAATIESKAKLVYDQVSDWLENTGDWQPESEAIA
                     EQVRLLAQICQRRGEWRHNHALVFKDRPDYRFILGEKGEVLDIVAEPRRIANRIVEEA
                     MIAANICAARVLRDKLGFGIYNVHMGFDPANADALAALLKTHGLHVDAEEVLTLDGFC
                     KLRRELDAQPTGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMINH
                     RLLKAVIKGETATRPQDEITVQMAERRRLNRMAERDVGDWLYARFLKDKAGTDTRFAA
                     EIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDELVCSQENGTVQIKGETVYKVTDVI
                     DVTIAEVRMETRSIIARPVA"
     gene            complement(23393..23495)
                     /locus_tag="JN001_001852"
                     /pseudo
     CDS             complement(23393..23495)
                     /locus_tag="JN001_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791239.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         5308 a         6207 c         6118 g         5862 t
ORIGIN      
        1 caagacgcgt tacaagtttc tgtaaatgag ttgcggtaaa tgttccaccg tagatttcgt
       61 ccaggtaatc agtaattttc tgtttcatgt tgcctttcag tggtagcgat cccatgaaac
      121 gagagactac tccgcagaaa ataaactgtc aattgagcac aagggtttta gtcacgcagg
      181 aaatcatttt ttaccaggga aaaagcgtat ttgtgagctg acgcaaataa tctatgggga
      241 tgtaaataag gtgtgacaga aaaaaaacgg cgcataagcg ccgctcatgg tgaattcttt
      301 taacctttga ccttcggcat tgcgatgtct ttcaagccac cggcgttctc aacgtgggta
      361 tatcccatct cgctaaggat ctcttttgct tgccctgact ggcgtccggc attgcaatac
      421 actttcacgg tgtcgttttt atccggaacg gcggtggcaa tgcgctcttt cacttccttc
      481 aggggaatat tgatggcccc ctgaacgtgc tcttgctgat actgctctgg aacacgaaca
      541 tcgatccagt gttcagcggc gaaaacgggc agtgaaaaca ccagtgccag agcaagtaag
      601 ccttttttaa acatgtaagc gtccttctat ggatgaaaat tgccatccat tatacgcctg
      661 agatttaaca atttttgcga aactcccctc accttttata acgctgtgcc agtttattag
      721 cagcccgact taacagcggt tccagcgcca cagccagcaa cattttcagc ggtcggcgag
      781 caactgattt tatcgcccag cccgctacac ccgccgggcc atagcgcagt gcggtaagaa
      841 gtaccagctt gcctgctaat ttgaaaccag gctttacctt ttgcccggcc tgttgccagc
      901 gagtattcat aactttcctc acagttgacg gaaacggcta cgtaacgtga aagtatcgga
      961 agtgacataa cgttccatct cgcgtaaacg cgtttcactt gccgccagtt cacggtcgac
     1021 ttcatccagc aattcgctgc tggagggtag ctgctcacca aaggccatgt tgtccggcat
     1081 tggatcaagc gcaaatgaca aaatgatgta agcaaccagg gtaaacagcg ccagaccgaa
     1141 gaaaatcgac agcaccacca ggatacgcac cagttttacc ggtacatcaa aatagttggc
     1201 aatcccggcg cagacgccgc ggaccatgcc ctgctgtgga atacgccata attttttatt
     1261 gagattaatg cccgccatta gcgatccctc cagttcggat gttctgcatc aagaatagat
     1321 tccagcgcct gaatacgttc gcgcatccgt tttgcttcat cagccagttg cgctaatcgc
     1381 tgctgctcac tttgcgacaa ttcactgcga ccagaacgat tgctgtaatg cagccataac
     1441 cagatcggta aaacaaacag cacaaaaatg gttaacggaa tagccagaaa tagcgcgctc
     1501 ataagtactc cttagacgat gagcggcggc gcgttcggac gccgcctaga tgttattatt
     1561 gattgtcttg cttcattttg gcttttaatt gtgccagttg ttcgctgatt gcatcatcgg
     1621 ctttcagttc ggcaaactga tcgtccagcg atttttgttt accgaagctg tggctttctg
     1681 cttccgcttc catctggtca atacgacgtt cgaaagattc gaaacgagcc attgcttcat
     1741 ccagtttgcc actgtccagc tgacgacgca catcgcgcga cgagtttgcc gcctgatggc
     1801 gtaacatcaa tgcctgctgg cgagcgcgtg tttcgctcaa tttgttttcc agctcaccgc
     1861 tctctttctt catgcgtgcc agcgtatcgt ccaccagcgt cacttcatgt tccagactct
     1921 taatcagatc ggtcagtttc tgtttttcaa ttaacgccgc acgtgccaaa tcctctctct
     1981 ctttcagcag cgccagttcg gctttttcct gccattcaac ttcacgcgcc gacgcttgtt
     2041 caatacggcg agtcagctgt ttcttttctg ccaacgcacg cgccgaagta gaacgtactt
     2101 caaccagtgt atcttccatc tcctggatca tcagacgcac cagtttctgt ggatcttccg
     2161 ctttctctaa cagagcgttg atgttggcat tcacgatgtc ggcaaagcga gaaaaaatac
     2221 ccataatgtt gtcctcttga tttctgcgtt caggattgtc ctgctgaact gttaatacaa
     2281 tttgcgtgcc aattttttat ctttttgatt tataaagatc tgattgaaga atcatcagca
     2341 acatgccagg atgaattagc gaattacact aacaagtggc gaatttcatc atggcagaat
     2401 acaaagataa tttacttggt gaggcgaaca gctttctcga agtgctggaa caggtttcgc
     2461 atctcgcacc gctggacaaa ccggtgctca tcatcggcga acgcggcacc ggtaaagagc
     2521 tgattgccag ccgcctgcat tatctctcct cccgttggca agggccgttt atttccctta
     2581 actgcgcggc gttaaatgaa aatctgctgg attccgaact gtttggtcac gaagcggggg
     2641 cgtttaccgg tgcgcaaaaa cgtcatccag ggagatttga acgtgccgac ggcggtacgc
     2701 tatttcttga tgaactcgct acggcaccga tgatggtgca ggagaaatta ttgcgcgtga
     2761 ttgagtacgg tgaactggag cgcgttggcg gcagccagcc attgcaggtg aatgtgcggt
     2821 tggtatgcgc gacgaatgcc gatctcccgg cgacggtcaa tgaaggcact tttcgcgctg
     2881 acctgctcga ccgactggct tttgatgttg tacaactgcc accactgcgc gagcgcgaaa
     2941 gcgacataat gttgatggca gaacactttg ccatccagat gtgtcgggaa atcaagctgc
     3001 ctctgttccc ggggtttacg gagcgcgcca gagaaacatt gctgaattat cgttggccgg
     3061 gaaatattcg tgaattgaaa aacgtggtgg aacgttcagt gtatcgccac ggcaccagcg
     3121 attatccgct tgatgacatc attattgatc cctttaaacg gcgtccgcct gaagacgcta
     3181 tcgccgtttc agaaaccacc tcgcttccaa cactgccgct ggatttacgt gagtttcaga
     3241 tgcagcagga aaaagagttg ctgcaactca gtttgcaaca agggaaatat aaccagaagc
     3301 gcgcggctga attactgggg ttaacttatc atcagttccg cgcgttgttg aaaaagcacc
     3361 agatttagcg aagttgagca atacaacttg ccggatgcgg cgtgaatgct ttattcggca
     3421 tacataatca ataagtcgtt tgcaggcctg ataagcgcag cgcatcagac attattgcgt
     3481 tgggctatta atcgctcagc gcatcctgca aaattttcat tgccgcatcg aattgcgcat
     3541 ccggaatggt cagcggatac aggaagcgaa tcacgttgcc gtatgcgcca caggtcagca
     3601 ggagcagccc ctgcgccagc gcgcgttgct ggattttctg tgcaatcgcc gctgacggct
     3661 cgcccgtttg cggatcgtta aactctgccg caatcatcga ccccaggccg cgtaccgcag
     3721 caatggccgg aacgctttct ttggcatcaa tcaacgtgtt tttgagacgc tggcccagtt
     3781 gattcgcgcg ttcgcagagt gattctttgt cgataatatt gagcaccgcg tgcgcggcag
     3841 ccaccgccag cgggttcccg gcgtaggtgc cacccaaccc gcccggcgcg ggcgcgtcca
     3901 taatattcgc gttaccgacc acgcccgaaa gcggcatccc gcccgcgagg cttttcgcca
     3961 tcgtcattaa gtccggctta tcggcgtaat gatccatggc aaacagttta ccggtacgcg
     4021 caaagccgct ttgcacttca tcggcaatca tcacaatacc gtgctcgtcg cacaggcggc
     4081 gaatggcggc aaccagctct tttggcgcaa cgttgaaacc gccctcgccc tgcaccggtt
     4141 cgaaaataat ggccgccacc tgcttcgctt caatgtccga tttaaacaag cgttcgatgg
     4201 cgtcgaggga gtcctgtgtt gaaatgccgt gtaaatctga cggataaggt acgtgataca
     4261 ccgaaccagg gaacgggccg aagccgattt tgtacggcgc aacttttccg gtcagcgcca
     4321 tggtcatata tgtacgaccg tggaagccgc cgctaaacgc aatcacgcca ggtcgtccgg
     4381 tatgggcgcg agcaattttc accgcgtttt ccaccgcttc cgcgccggta gtgaagaatg
     4441 cggttttagc ctgcccgctc actggggcaa gggcgttaat tttctccgcc agcgtgacgt
     4501 agctttcgta cggcacaatc tgatacgccg tgtgggtaaa ctgttgcaat tgctgctcca
     4561 ccgccgcgac cagatcaggg tggcgatgcc cggtattcag caccgcaatg cctgcggcga
     4621 aatcgatgta ttcgttgccc tctacgtcct tcagcgtagc gttttctgcc gactgggcga
     4681 agaagttaca catcacgcca accccgcgtg gggtagcaga aagacgacgc tgatggaatt
     4741 cattgttgct catgtttcac accttttgac tcttcactgt taatcggaaa ttaaacgccc
     4801 agacgatcgc gcaggctgta ataagccgcg cccatcgcgg taaatggcac gcgcagcgtg
     4861 cgcccgccgg ggaacgggta atgcggcaga ttggcgaagg catcgaaacg ctcggcgtca
     4921 ccgcgcagca gttcagcaat caaacgcccg gcgaggtggg tacaggtgac gccgtggccg
     4981 ctgtagccct gcatgtaata gatgttggta tcgaggcgac cgaactgcgg catccgtgaa
     5041 agggtcagca ggaagttgcc cgtccagcga tagtcgattt tgacgccctt cagctgcggg
     5101 aaggttttca gcagtttcgg cacaacaaga cgctcaacgt catccgggtc gcgcgcgccg
     5161 tagaccacgc cgccgccgta cagcaaacgg ttgtcggcgg taagacggta gtaatcaagc
     5221 agataattac agtcttccac acagtagttt ttcgggatca gcgaacgggc taaatcttcc
     5281 gacagccgtt cggtggtgat cacctgcgtg ccgcacggca tgctgcgttt cgccagttcc
     5341 ggctctactt tatcgcccag atacgcattc ccggcgacaa tcacatactt cgccgtcacc
     5401 tgacctttgg cagtgcgcac aacggctggc gtggtgtgct ggatctgcgt cacggcagaa
     5461 agttcataca cgcgcccgcc gttgaggcgg atggcgtccg cttcgccaat ggcgaggttt
     5521 agtgggtgaa tatgcccacc gctgtgatcc agcagcgcac cggtatagcg atcgctggct
     5581 acttcacggc gaatggcgtt ggcgtccagc aattccagct gtttattgcc gtagcgttcc
     5641 cagttctctt tctgctcttc aagtgtggcg agctgtttat cattcatcgc cacaaacagg
     5701 ctgccggggc ggtagtcgca gtcaatctga taacgtttga tacgttcgcg gatgatctca
     5761 ccaccttcga acatcatgct gccgagcata ggggcggtgt ccatgccgta gcttttttcg
     5821 atcacgtcga tgtcgcggtt gtaggagttc acaagctgcc cgccattgcg cccgcttgcg
     5881 ccaaagccga tgcgtgaggc ttcgagaacc actacgtcaa agcccgcttc cgccagatgc
     5941 agcgcggagg agagcccggt atagccgccg ccaaccacgc aaacgtcgca ggtgattgac
     6001 tcattcaggg tgtcgaatgg cacgtattta tgcgtaataa ctgctggtat gttcggtcat
     6061 ttcaggcctc caggcttatc cagatggttt tcagttcggt gaatttttca agggcatgca
     6121 gggatttgtc gcgaccgttg ccgctctgct tatagccgcc aaacggcacg gtcatatcgc
     6181 cgtcgttgta gttattgacg aagacggaac cggctttcag gcggcggctc atacggtgcg
     6241 cgcgggagag gtcgcgcatc cataccgccg cgccaaggcc gtactggctg tcgttggcaa
     6301 gctgtagcgc ctgttcttct gatgtgaaac gcgtgaccac cagcaccgga ccgaaaatct
     6361 cttcgcggct taaggacgca ttcgggtcta catccacaaa gatggtcggg ccgatggcgg
     6421 cagccagccc ggcgttacgg ccatccagca gcagttgccc tttgccttcg ccctcacgaa
     6481 taaagctatg gaccgagtcg gcgtgggcgc agtcgattaa agtgcccatg gtggttgcgg
     6541 ggtcaagcgg atggcccggc tgccagtttt gcgcctgctg ttttaacagg gctaagaatt
     6601 catcggcgat gctctcttcc agcaacaggc gtgttccggc gatgcacacc tgaccctggt
     6661 tgtagaagat gcctgctgcg gtggagctcg ccgctttttg cagatccgaa caatcggaga
     6721 aaacgatgtt ggcgcttttg ccgcccgctt ccagccagac gcgtttcatg ttgctgtcgc
     6781 ccgcatcttt cagcagctgt ttcccggtac gggttgaacc ggtaaaggca atggcgtcga
     6841 tatcgttatg acgcgacagc gcctgccccg cttcatgacc aaaacccgtc accacgttca
     6901 acacaccatc cggcaagcct gcttctttcg ccagccccac gagacgaatc gcactgagcg
     6961 gtgatttttc agacggtttt agaatcacgc tgtttcccgc cgccagcgcc gggccgagtt
     7021 tccagcaagt cagcaacagc gggaagttcc acggcacgat ggcggcaatc acgccgaccg
     7081 gttcacgcac gatcatcgcc agctcatggc tactggtggt cgccacttcg ccatacactt
     7141 tgtcgatcgc ttcggcgtac cagcgaatgg cgcgcgccgc gccgggaata tcatcacgca
     7201 gactgtgacg aatcggtttg ccggtgtcga gagtttccag cagtgccagc tcttcggcgt
     7261 gggcttccat taaatcggcg agtttattca gtaccgcttt acgtttagcc ggagaagaga
     7321 gtgaccagtc gccgcgttca aatacgccgc gtgctgcgct caccgcacgg tcgatatcga
     7381 cgctcttgcc gcgggcaatt ttcgccagcg gtgcctgggt gactggatca acggtttcaa
     7441 aggtttcatt ttccgccgca gcagtatatt caccgttaat aaataagcgg ttttcaatgg
     7501 cgagacttaa cgctttatcc tgccagtaag ccagatgatg aaaattcatt atgactcctg
     7561 tttcacgtct atcagatata tgcagtttgt gaacgtcagg gcgcagagat ccccgggccg
     7621 tatgcccgtt tatttctggc gacattcttt atatacactt catccttcaa gccgcctctg
     7681 ccttggctgc gttcgctccc ccgaatcact tacctgagta agctcatcgg gattcgctca
     7741 cttgccgcct tgatgcaact tgaatgattt tgtgtataga ttgccgggcg cattgcgctt
     7801 acccggctta cagaacaaaa agattaaaac gtggtgggcg tatgggcgct gataattcgg
     7861 caaatacctg ccgacgtatt actgaaactg tgcgggatgc cggtattaat ggcataactt
     7921 tgacccgcga cgaggtggta atcctgacca ttaatcgtca gaacaatttc accttccagt
     7981 actgtgccta tttcctcacc ctgatgctta attctttccc cagtggttgt gcccggctgg
     8041 tacgtttcaa agatcatcgc cagcgtgcga ttcgggttac cgttatgaac cagcttcatt
     8101 gacacaccct gactgcccat ctcaattaag tcgtcctgat taatgacgac ctgcggctca
     8161 tcaggttttt ccggctcgga aaagaattcc gagagtgaca gaccatacac cttcagcagc
     8221 ttttgcagcg tactgatggc agggctgact ttatcttgtt ctatcgtact gatagcactg
     8281 tgagtcagcc cggagagttc ggcggcacga cgttgtgaaa gcccctgctg ctggcggatt
     8341 tccgacaagc gttttcctgg cgccagtccc tcatcactca tatttgcatt tccttaaact
     8401 gtagtggtca gagtcgctgt ttttcagcga tatggtgctg acaagcggtg ataaagccct
     8461 cgaacaatat acgcgaaaga gcgtactcgc tactgttcca ttccgggtgc cactgtacgc
     8521 ccagcgcaaa aggatgattg atgacgctaa ccgcctcaac taagccatcc ggcgagcgag
     8581 cttcaacacg caaccgtggg ctaacgacct tcgccccttg tccatgtaga gagtttaccc
     8641 aaaagttgct acattcaggt aacaacgcag acagtaatcc cccctcttca acctgaactt
     8701 catgcgacgg tgcatattgc tgttccaccg gcagttcgga tcttcccgat gttccagcaa
     8761 ttcaggctgt tcgcacagct tgcgatgcaa cgaaccaccg gttgccacca ccagttcttg
     8821 taaaccccgg cagatggcga aaatggggat gcgcctttcg agtgcggcat taattatcgc
     8881 catgctcaga agatcacgcc cgggatcggc gtcaggctca tcgccgtttt caccatatag
     8941 gtgcggctgc acattgctgg gactaccagg aagataaatg ccatcgagtt tcggcaaaag
     9001 ttgttcaagt aacgacggtt ccgccagcgc atgtggtagc gcaattggca agccgcctgc
     9061 gtggatgatg gcattcaggt acttttcttg cagagtctgg gtcgcatgac ccttaagcct
     9121 gttcctgcac attacgacac cgataaccgg attgttcatt atatttttca tgctcaatct
     9181 cacaaagtgg actaaattat cgccattact gcgctttaaa tgacctttat gttcaatatt
     9241 ttttcaatct agcagtgggt tttcattttt gtaaactaaa tttaacattt ggcaaacatt
     9301 tagtttgcat acagattcga atggtggtca ttatatttta cgctttgata acgagcggaa
     9361 aacaaaccaa aggcgaagaa tcatggaaac caatatcgtt gaagtagaga actttgttca
     9421 gcagccagaa gagaggcggg gtagcgcctt tacgcaggaa gtgaaacgct acctggagcg
     9481 ctacccgaat acgcaatatg ttgatgtttt acttactgat ttgaatggtt gcttccgtgg
     9541 aaaacgtatc cctgtttcaa gcctgaagaa gttggagaaa gggtgttatt tcccggcctc
     9601 ggtgtttgca atggatattc tgggcaacgt agtagaagaa gcgggtctgg gtcaggaaat
     9661 gggcgagccg gatcgtactt gtgttcctgt tctcggttcc ttaacccctt ctgccgccga
     9721 tccagagttt atcggtcaga tgctcctgac catggtcgat gaagatggcg ctccctttga
     9781 cgttgagccg cggaacgttc ttaaccgcct gtggcagcag ctacgccagc gcggattgtt
     9841 cccggttgta gcggtagagc tggagttcta tttactggat cgtcagcgcg acgctgaagg
     9901 gtatctgcaa ccgccctgcg cgcccggcac cgataaccgc aatacacaaa gccaggttta
     9961 ctccgttgat aacctcaacc acttcgccga cgtgctcaat gatattgatg aactggcgca
    10021 gttacagtta attcccgccg acggtgcggt cgccgaagcc tcgccgggtc agtttgaaat
    10081 caacctttac cataccgata acgtgctgga agcctgcgat gatgcgctgg cgctaaaact
    10141 cctggtgcgt ctgatggcag aaaagcataa gatgcactcc acttttatgg cgaagccgta
    10201 tgaagagcac gcgggcagcg ggatgcatat ccatatcagt atgcaaaata atcgtggcga
    10261 gaatgtgctt tctgacacag aaggcgaaga ttcgccgctg ctgaaaaaga tgctcgccgg
    10321 gatgattgac ctgatgccgt cgtcgatggc gttgctggca ctaaacgtga actcgtatcg
    10381 ccgcttccag ccgggaatgt atgtgccgac gcaggcgtcg tggggccata acaaccgcac
    10441 cgtcgccctg cgtattccgt gcggcgaccg tcataatcac cgcgtggaat atcgcgtggc
    10501 gggtgccgat gccaacccat atctggtgat ggcagcgatt tttgccggta ttttgcatgg
    10561 ccttgataac gagctgccgt tgcaggaaga agtcgaaggc aacgggctgg aacaggaagg
    10621 cttacccttc ccgattcgcc agagcgatgc cctgggtgag tttatcgaga atgatcacct
    10681 gcgccgctat ttaggcgaac ggttttgcca tgtgtatcac gcctgtaaaa atgatgagct
    10741 gttgcagttt gagcgcctca tcacagaaac agaaattgag tggatgttga aaaacgcata
    10801 gtaccccttg cggggttgtt tcatcgacct gagcggagcc aggcctgaca tttgctggta
    10861 atccagacat ttcccggatg tcgcgttatg gagcgcaggc ggcaacgggc ttccgttaac
    10921 gattaagact gtgacgagga aatgagatga tgccgatgat taaatccccg catggcgagg
    10981 gaggctgcgt atgcgcccct cctgctactg actggactcc gtcccctttg cttcccttgc
    11041 taaacaggtt tgatttcagg tcgacacgac cgcaaacctt attacgcagg gggaggcagc
    11101 aattatggct attaattcac cactgaatat tgctgcgcaa cccggcaaaa cccgtctgcg
    11161 aaaatcactg aaattgtggc aggtggtgat gatgggtctg gcctatctca cgccgatgac
    11221 cgtatttgat acttttggta ttgtctccgg cattagcgac ggtcacgttc cggcgtccta
    11281 tttgctggcg ctggcgggcg tgctgtttac cgctatcagc tacggcaaac tggttcgcca
    11341 gtttccggag gccggttcgg cctataccta cgcgcaaaag tcgattaacc cgcacgtcgg
    11401 atttatggtc ggctggtcat cgctgctgga ttatctcttt ttgccgatga tcaacgtctt
    11461 gttggcgaaa atctatctct ccgccctctt cccggaagtg ccgccgtggg tgtgggtagt
    11521 aaccttcgtc gccattttaa ccgccgcgaa tctgaagagc atcaacctgg tcgctaactt
    11581 caataccctg tttgtactgg tgcaaatctc catcatggtg gtgtttatct tcctggtagt
    11641 tcagggactg cataaaggag aaggcgttgg caccgtctgg tcacttcagc cgtttatcag
    11701 cgagaacgcg cacctgatcc cgattattac cggggcgacg attgtctgtt tctccttcct
    11761 cggtttcgat gcggtgacca cgctttcgga agagacgccg gacgccgcac gcgtgatccc
    11821 gaaagccatc ttcctgacgg cggtctacgg tggcgttatc tttatcgcgg cgtcgttctt
    11881 tatgcagctg ttctttcccg atatcagccg ctttaaagat ccggatgccg cactgcctga
    11941 aattgcgctg tacgtcggcg gcaagctctt ccagtcgatt ttcctctgca ccacgtttgt
    12001 gaacacgtta gcctctggcc tggcttcaca tgccagcgtg tcgcgtctgc tgtatgtgat
    12061 ggggcgtgac aatgtgtttc cggagcgcgt gtttggctat gtgcacccaa aatggcggac
    12121 tccggcactc aacgtcatta tggtcgggat tgtcgcgttg tcggcgctgt tcttcgattt
    12181 agttaccgcc acagcgttaa ttaacttcgg tgctctggtg gcgtttacct tcgtgaatct
    12241 gtcggtgttt aatcatttct ggcggcgtaa aggaatgaat aaaagctgga aggatcactt
    12301 ccactatttg ctgatgccgc tggttggcgc gctgacggtg ggtgtgctgt gggttaacct
    12361 cgagtcaacg tcactgacac tcggtctggt atgggcttcg ttaggcggcg catatttatg
    12421 gtatctgatc cgccgctatc gcaaagtgcc gttgtatgat ggtgacagaa cgccggtgag
    12481 tgaaacgtaa tagtcggatg cgcggcgcat tatcctgccg gagggtaatg caccgcgcca
    12541 ttaactataa aaagatgtat gacccggatc acgagtgcta tcatccgccc ttatgcttag
    12601 cgcattaacc ccaggggcaa ataatgaacc acgatatccc gctaaaatat tttgatattg
    12661 ccgatgagta cgcgaccgaa tgcgcagagc ctgtcgcaga cgctgaacgc acaccgctgg
    12721 cccactactt ccagttactg ctcacccgtt tgatgaacaa tgaagagatc agcgaagaag
    12781 cccaacatga aatggctgct gaagcgggga ttaatcccgt acgcattgat gagatcgcag
    12841 agtttttgaa tcaatggggt aatgagtaat tatttaattg cagacgatcg gtcagtatcg
    12901 ttgtccggat aaagcgttca cgccgcatcc ggctaacaat gacacgcact gcagcgtgct
    12961 ttaatgggtt tctcacgatc gtaccgctct gctcctcgct aagttgttct gtgagttata
    13021 gttatagagg aagcacgggt acgaatgttg aacagatggc gacgccacct gttcaacgac
    13081 caaccacacg gccctcatta cgacccctga acacaaacgg taatggcaaa tgtcattaaa
    13141 tattagtaag atagcctctt tacataaaat cccttaatat tatgcgccag gtattatcgt
    13201 ctcttttggt gattgctgga cttgtgagtg gtcaggcaat cgccgcgcct gaatcccccc
    13261 cgcatgctga tatccgcgac agcggttttg tctattgcgt cagcgggcaa gtcaacacct
    13321 ttaacccatc caaagcgagc agtgggttaa ttgtcgatac ccttgccgcc cagttttatg
    13381 atcgactgct ggatgtcgat ccctatacct atcgcctgat gccggaactt gccgaaagct
    13441 gggaagtact cgacaacggc gcgacctatc gcttccacct gcgtcgcgat gttccgtttc
    13501 aaaaaaccga ctggtttact cccactcgta aaatgaatgc cgacgatgtg gtgtttacct
    13561 tccagcgaat ttttgaccgc aacaacccgt ggcataacgt caacggcagc aacttcccct
    13621 acttcgacag cctgcaattt gccgataacg tgaaaagcgt ccgcaaactg gataatcata
    13681 ccgttgagtt ccgactcgcc cagccggatg cttctttttt gtggcacctc gcaacccatt
    13741 atgcttcggt catgtcggca gaatatgccc ggaagttaga gaaagaagat cgccaggagc
    13801 aactcgaccg tcaaccggtc ggcaccggtc cgtatcagtt gtcggaatac cgcgccgggc
    13861 aatttattcg cctacaacgt catgatgact tctggcgcgg taaaccgtta atgccgcagg
    13921 tagtggtgga tttaggctcc ggcggcaccg gacgtctgtc gaaactcctg accggggaat
    13981 gcgacgttct ggcctggcct gctgccagcc agctatccat tttgcgtgac gacccgcgct
    14041 tgcgtttaac gctgcgtcct gggatgaacg tcgcctatct ggcatttaac accgccaaac
    14101 cgccgctaaa taatcccgct gtccgccatg cactggcact ggcgattaat aaccagcgcc
    14161 tgatgcaatc catctattat ggtacggctg aaacggcggc ctctatttta ccgcgcgcct
    14221 cgtgggccta tgacaacgag gctaaaatta ctgaatacaa tccggcgaaa tcgcgcgaac
    14281 agttgaaggc gttggggctg gaaaacttaa cgctgaaact gtgggtgccc acacgttcgc
    14341 aggcgtggaa ccccagtcca ctgaaaactg ccgaactgat tcaggcggat atggcgcagg
    14401 ttggcgtaaa agtggtgatt gtgccggtag aaggtcgctt tcaggaggcg cggttgatgg
    14461 atatgagcca tgatctgacg ttatccggtt gggcgacgga cagtaacgac ccggacagtt
    14521 tcttccgtcc tttactgagc tgcgcggcaa ttcattcaca gaccaacctc gcccactggt
    14581 gcgatccgaa attcgacagc gtgttgcgta aggcgctctc ctcgcagcag ctggcggcgc
    14641 gtattgaagc ctatgacgaa gcgcagagta ttctggcgca ggaattgccc attttgccgc
    14701 tggcgtcgtc attgcgtttg caggcctatc ggtacgatat caaaggtctg gtacttagcc
    14761 cgtttggtaa cgcctccttt gctggggtgt atcgcgagaa acaggatgag gtgaaaaaac
    14821 catgattatc ttcaccttac gccgcatttt gttattgatt gtcaccttgt tcctgctgac
    14881 cttcgttggc ttcagcttga gctatttcac ccctcatgcg ccgttacaag gcgcgtcact
    14941 gtggaatgcc tgggtgttct ggtttaacgg cctgatccac tgggattttg gtgtttccag
    15001 cattaacggt caaccgattg ccgaacagtt aaaagaggtc ttcccggcga cgatggaact
    15061 gtgcatcctc gccttcggtt ttgcgctgat tgttggcatc cccgtgggga tgattgccgg
    15121 gattacgcgc cataagtggc aggataactt gatcaacgcc atcgccttac tgggcttttc
    15181 aatcccggtg ttctggctgg cgcttctgtt gacgctgttt tgttcactca cgctaggttg
    15241 gttgcccgtt tcagggcgtt tcgatctgct ctacgaagtg aaaccgatta ccggttttgc
    15301 gttgattgat gcctggcttt cggactcacc atggcgggat gaaatgatca tgagcgcaat
    15361 ccgccatatg atattgcccg tgatcaccct gtcggttgcg ccaacaactg aagtgatccg
    15421 cctgatgcgt atcagcacta tcgaagtgta tgaccagaac tatgtaaaag cggcggcgac
    15481 ccgcggtttg tcgcgcttta ctattttgcg tcgccacgtt ctgcataacg cgttaccgcc
    15541 ggttattcct cgcctgggct tacagttttc caccatgctg acgctggcga tgatcaccga
    15601 aatggttttt agctggccgg gtttagggcg ctggttaatt aacgccatcc gccagcagga
    15661 ttacgcagcc atttccgccg gagtgatggt gtgtggctca ctggtcatta ttgttaacgt
    15721 gatttctgat attttgggtg ccatggctaa ccctctgaaa cataaggaat ggtatgcctt
    15781 acgatagcgt atacagcgaa aagcgcccgc cgggcacgct gcgtaccgcc tggcgcaaat
    15841 tttatagtga cgcctctgcg atggtcggcc tgtacggctg cgcggggctg gctgtactgt
    15901 gtatttttgg cggctggttt gcgccttacg gcatcgacca gcaatttctc ggttatcaat
    15961 tattgccgcc atcatggtcg cgctatggcg aagtttcttt cttcctgggg actgacgacc
    16021 tcggacgcga tgttttaagc cgtttactga gcggagctgc gccaaccgtg ggtggcgcat
    16081 ttgtggtgac gcttgccgcg acgatctgtg gcctagtact gggcaccttc gccggggcga
    16141 cacacggcct ccgctcagcg gtgcttaacc atattctgga taccttactg gcgatccctt
    16201 cgctgctgtt ggcaattatc gttgtagcgt ttgccggacc gagtttgtcc cacgctatgt
    16261 ttgctgtctg gctggcattg ctgccgcgta tggtacgttc gatttacagc atggtgcatg
    16321 acgaactgga aaaagagtac gttatcgccg cccgtctgga tggcgcatca acgctgaata
    16381 ttctctggtt tgctgtgatg ccaaacatca ccgccgggct ggtcaccgag atcacccgcg
    16441 cactgtcgat ggcaattctc gatatcgccg cgctgggctt tctcgatctc ggcgcacaac
    16501 tcccctcgcc tgaatgggga gcgatgctcg gtgatgcgct ggaactgatt tatgtcgccc
    16561 cgtggactgt catgctgcca ggtgcggcaa ttatgattag cgtgttgttg gttaacctcc
    16621 ttggcgatgg cgttcgtcgt gcgattattg cgggggtgga ataatgccat tactcgatat
    16681 tcgtaacctg accattgaat ttaaaaccgg tgatgagtgg gttaaagccg tcgaccgggt
    16741 aagtatgacc ttaaccgaag gtgaaatccg cggtcttgtt ggtgaatccg gttccggcaa
    16801 gagtttgatt gcgaaagcga tttgtggggt gaataaagat aactggcgtg ttattgctga
    16861 ccgtatgcgt tttgatgata tcgatttgct gcgtctctcc gcacgcgaac ggcgcaaact
    16921 ggttggccat aacgtgtcga tgattttcca ggaaccgcag tcgtgtcttg acccttcaga
    16981 acgtgtgggt cgccagttga tgcaaaacat cccagcctgg acctataaag gccgttggtg
    17041 gcagcgtttt ggctggcgca aacgccgtgc cattgaactg ctgcaccgcg tggggattaa
    17101 agatcacaaa gatgcgatgc gcagttttcc ctatgagttg accgaaggtg aatgtcagaa
    17161 agtgatgata gccattgcac tggcgaatca accgcgtctg ctgattgctg acgaaccgac
    17221 caactcaatg gagccaacaa cccaggcgca aatctttcgc ctgctgacgc gtctcaacca
    17281 aaacagcaat accactattt tgcttatcag ccatgactta caaatgctta gccaatgggc
    17341 ggataaaatt aacgtgcttt actgcggtca aacagtggaa accgcgccga gtaaggagtt
    17401 ggtgacgatg ccacatcatc cttataccca ggcgctgatc cgcgcgatac cagacttcgg
    17461 cagcgcgatg ccgcataaaa gtcgcctcaa tacgctgccc ggcgctatcc cactgctgga
    17521 acagttaccg attggttgtc gtctggggcc acgttgcccg tatgcacaac gagaatgcat
    17581 tgtgacgcca cgtttgacgg gggcgaaaaa tcatctctat gcctgtcatt tcccgctgaa
    17641 catggagaaa gagtgagatg atcgaaacgc tgcttgaagt gcgtaattta agtaaaacgt
    17701 tccgctaccg gaccggctgg tttcgccgtc agaccgtaga agcggtaaaa cccttgagct
    17761 ttacgctacg tgaaggccag acactggcga ttattggcga gaatggttcg ggtaaatcca
    17821 cgctggcaaa aatgctggcg ggaatgatag agcctaccag cggcgagtta ttgattgacg
    17881 atcatccact gcattttggc gattattcct tccgcagtca gcgtattcgc atgatttttc
    17941 aggatccttc gacctcgttg aatccccgtc aacgtatctc gcaaattctg gattttccac
    18001 tgcgcctgaa caccgacctg gaaccggaac agcgtcgcaa acagattatt gaaacgatgc
    18061 gtatggttgg gctgctaccg gatcacgtca gttactatcc gcatatgttg gcacccggac
    18121 aaaaacagcg tctgggtctg gcgcgcgcgc tgatattgcg cccaaaagtc attattgccg
    18181 atgaagcact cgcttcactg gatatgtcga tgcgttcgca gttgattaat ctgatgctgg
    18241 agttacagga aaaacagggc atttcgtata tttatgttac ccagcatatc ggaatgatga
    18301 agcacattag cgaccaggtg ctggtgatgc atcagggcga ggttgtcgag cgaggcagca
    18361 ccgcggatgt gctggcatcg ccgctgcatg aactcaccaa acggctgatt gccgggcact
    18421 ttggcgaagc attgacagcg gatgcgtggc gtaaagatcg ctaattttct gaatcctcct
    18481 tccagattat ccacctcatt ctgacaagag attaaatctt gtcagaatga ggtgatggat
    18541 aaaataaaat caaatgcgcg tgatttaaga cgcaatctca ctttgcagga acgaaagctc
    18601 tggcgatatc ttcgcagccg acgttttggt gatttcaaat ttcgccgtca acatccggtg
    18661 gggagctaca ttctcgattt tgcttgctgc tcggcgcgcg tagtcgttga gctggatggt
    18721 gggcagcatg atttggcagt tgcctatgat accaggcgca ctagctggct tgagtcgcag
    18781 ggctggaccg tgctgcgttt ctggaataac gagattgatt gtaatgagga ggcggtgctg
    18841 gagattattc tgcaggaact gaaccgccga tcaccctcac cctgaaaggg cgagggggcc
    18901 gaccgagccg aatagctgtt gtggtgaaaa catggagact gtgctggaga atattcggca
    18961 aggtctgaac catcccagcc atcgccataa aagggttagg ggctgtatga gcctgtttgt
    19021 tgctggggta acaatatttg cacaatatgg tcccctcgcc cctctgggga gagggttagt
    19081 gtaaggggaa aagcgcccac cctgccgcag cctgctccgg tcggacctag caactatagc
    19141 tactcacagc caggttgatt ataataacca tttatctgtt cgtactgttt actaaaacga
    19201 cgaatcgcct gattttcagg cacaacaagc atcaacaata aggattaaag ctatgggttt
    19261 tctttccggt aagcgcattc tggtaaccgg tgttgccagc aaactatcca tcgcctacgg
    19321 tatcgctcag gcgatgcacc gcgaaggagc tgaactggca ttcacctacc agaacgacaa
    19381 actgaaaggc cgcgtagaag aatttgccgc tcaattgggt tctgacatcg ttctgcagtg
    19441 cgatgttgca gaagatgcca gcatcgacac catgttcgct gaactgggga aagtttggcc
    19501 gaaatttgac ggtttcgtac actctattgg ttttgcacct ggcgatcagc tggatggtga
    19561 ctatgttaac gccgttaccc gtgaaggctt caaaattgcc cacgacatca gctcctacag
    19621 cttcgttgca atggcaaaag cttgccgctc catgctgaat ccgggttctg ccctgctgac
    19681 cctttcctac cttggcgctg agcgcgctat cccgaactac aacgttatgg gtctggcaaa
    19741 agcgtctctg gaagcgaacg tgcgctatat ggcgaacgcg atgggtccgg aaggtgtgcg
    19801 tgttaacgcc atctctgctg gtccgatccg tactctggcg gcttccggta tcaaagactt
    19861 ccgcaaaatg ctggctcatt gcgaagccgt taccccgatt cgccgtaccg ttactattga
    19921 agatgtgggt aactccgcgg cattcctgtg ctccgatctc tctgccggta tctccggtga
    19981 agtggtccac gttgacggcg gtttcagcat cgctgcaatg aacgaactcg aattgaaata
    20041 atcattctgt tggtaaatat tgggcggcgt tctgccgccc gttatctctg ttataccttt
    20101 ctgatatttg ttatcgccga tccgtctttc tccccttccc gccttgcgtc aggataacga
    20161 tttcctttac gaccaaggag cgcccatgga acaacgccac atcaccggca aaagccactg
    20221 gtatcatgaa acgcaatcca gtactgcgga gtatgacgtt ctgcctctgg tcccggaagc
    20281 cgcaaaggtc agcgatccct ttctgctcga cgtgatcctt gatgaagaaa cgctagctcc
    20341 cttcctttca tggctggtcc ctgcgcgcgt tcttgcagtg gaattgttcc ctgaccagct
    20401 taccgtgacc cgttcacaga ccttcaccgc ttatgaacgc ttgtctacgg ccctgacggt
    20461 tgctcaggtt tgcggcgtcc agcggttatg taactactat tcggcgcgac ttacgccgct
    20521 ccccgggcct gattcctcta gggaaagcaa tcataggttg gcacaaatca cgcaatatgc
    20581 ccgccaactg gctagctcgc cttctattat cgacaaccga tcgcgccagc atctgaatga
    20641 cgtcggtctt actgccaggg actgtgtaat cattaaccaa atcattggtt ttattggctt
    20701 tcaggcgcgg accattgcga catttcaggc ttatctcggg cacccggtac gctggttacc
    20761 cggtctggaa atacaaaact acgccgacgc gtcactgttt gctgatgaat caatacgctg
    20821 gcgaagcagc tatgaggtgg aaaaactacc tgaagagtac acaaaaagtt caacagcaga
    20881 actttgccaa ctggccgaaa cactctctct ccaccctatt tcactttccc ttctcgaaag
    20941 gttgttaaac agtacacggg ttaatacaca gccggataat aagcttgcgg cgttgttatg
    21001 cgcgcggata aatggcagtc ctgcttgttt tgccgcctgt atggattcat caaatgaata
    21061 taaaaaaatc agcccccttc tgcgcaaggg cgaaaatgaa attaaccaat gggctgaccg
    21121 tcattctgtt gagcacgcta ccgttcaggc gatacaatgg ctgacccgag cacccgatcg
    21181 ctttagcacc gcccagttca gccctttact cgaacacgaa caatcatcaa cgcagattat
    21241 taatctgctg gtatggagcg ggctgtgtgg ctggataaat cgcttaaaaa tcgcgttggg
    21301 tgagacatat taaccttgcc gcgtcagaca gattcgcgta aaactgtcag ccgctctaat
    21361 ggccaccaaa atagacaatt atgtttcagg acaacccgct gctagcgcag cttaaacagc
    21421 aactgcattc ccagacgcca cgcgctgaag gggtggtaaa agccacagaa aaaggctttg
    21481 gcttcctgga agtcgacgcg caaaaaagtt atttcattcc gccgccgcag atgaaaaaag
    21541 tcatgcatgg cgaccgaatt atcgcggtga tccacagtga aaaagaacgt gaatccgcag
    21601 agccagaaga actggttgaa ccgttcctga ctcgtttcgt gggtaaagtt cagggcaaaa
    21661 atgaccgtct ggccatcgtt cctgatcatc cactcttaaa agacgccatt ccttgccgcg
    21721 cagcccgtgg cctgaaccac gagtttaaag aaggcgactg ggcggttgcc gaaatgcgcc
    21781 gtcatccgct gaaaggcgat cgttctttct atgctgaatt gacacaatac atcacttttg
    21841 gtgacgacca ctttgtaccg tggtgggtta cacttgcgcg ccataatctg gaaaaagaag
    21901 caccagacgg cgtcgctacc gaaatgctcg atgaaggtct ggttcgtgaa gatctgaccg
    21961 cgctggattt tgtcaccatc gacagtgcca gcacagaaga tatggatgac gcccttttcg
    22021 ctaaggcgtt gccggatgac aaacttcagc tgattgtggc gattgccgat ccaaccgcgt
    22081 ggattgctga aggcagcaag ctggacaaag ccgcgaaaat tcgcgcattc accaactatc
    22141 tgcctggctt caacatccct atgctgcctc gcgagctttc tgacgatctc tgctcactgc
    22201 gcgccaatga agtccgcccg gtactggcat gccgcatgac gctctccgct gatggcgcca
    22261 ttgaagataa tatcgaattc tttgccgcca ccatcgaatc caaagcaaag ctggtgtatg
    22321 accaggtttc tgactggctg gaaaataccg gtgactggca gcctgaaagt gaagcaattg
    22381 ccgaacaagt ccgtttgcta gcgcaaattt gccaacgccg cggcgagtgg cgtcataacc
    22441 acgcactggt gtttaaagat cgcccggatt accgctttat tctcggtgaa aaaggtgaag
    22501 tgctggatat cgtcgccgag cctcgtcgca ttgccaaccg tatcgtcgaa gaagcgatga
    22561 ttgccgctaa catttgtgcg gcccgcgtac tgcgcgataa gctcggtttt ggcatctata
    22621 acgtgcatat gggctttgat ccggcgaatg ccgacgcgct ggcagcgttg ctgaaaacgc
    22681 acggtctgca tgtcgatgcc gaagaagtgc tcacgctgga cggtttctgc aaactgcgtc
    22741 gtgaactgga cgcgcaacca actggtttcc tcgacagccg cattcgtcgc ttccagtcat
    22801 ttgctgaaat tagcactgaa cccggtcctc actttggcct cggtctggaa gcatacgcca
    22861 cctggacttc gccgatccgt aaatatggcg acatgatcaa ccaccgtctg ctgaaagcgg
    22921 ttatcaaagg cgaaactgcg acgcgcccac aggatgaaat cactgtccaa atggccgagc
    22981 gtcgccgtct caaccggatg gcagaacgtg atgttggtga ctggttatac gcacgcttcc
    23041 tgaaagacaa agccgggacc gacacccgtt tcgcagcgga aattgtcgat atcagccgtg
    23101 gcggcatgcg tgtgcgtttg gttgataacg gcgctatcgc ctttattccg gcacctttct
    23161 tacacgctat gcgcgatgaa ctggtttgca gccaggaaaa cggcactgta caaattaaag
    23221 gtgaaacggt ttacaaagta actgacgtta ttgacgtcac cattgccgaa gtccgcatgg
    23281 aaacccgcag cattattgcg cgcccggtcg cgtaatctcc tttcacggcc tattcctcat
    23341 ggatgggccg tttatttccc cgctctacct tcgttatatc caggcagatt ttttaactga
    23401 ctttcgtttg aaaactggcg tttttccaaa actggattac aaataaatat ataaaaaaac
    23461 aatgcgttta gccgccgtta atttcatgta agtca
//
LOCUS       DADMJE010000052        23030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.053, whole genome shotgun sequence.
ACCESSION   DADMJE010000052 DADMJE010000000
VERSION     DADMJE010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 23030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.053"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..562)
                     /locus_tag="JN001_001853"
     CDS             complement(<1..562)
                     /locus_tag="JN001_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9053106.1"
                     /translation="MPHTIKKMSLIGLILMIFTSVFGFANSPSAYYLMGYSAIPFYIF
                     SALLFFIPFALMMAEMGAAYRKEEGGIYSWMNNSVGPRFAFIGTFMWFSSYIIWMVST
                     SAKVWVPFSTFLYGSDMTQHWRIAGLEPTQVVGLLAVAWMILVTVVASKGINKIARIT
                     AVGGIAVMCLNLVLLLVSITILLLNGG"
     gene            complement(781..1758)
                     /gene="epmA"
                     /locus_tag="JN001_001854"
     CDS             complement(781..1758)
                     /gene="epmA"
                     /locus_tag="JN001_001854"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY9053107.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLNLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2083..3891
                     /gene="frdA"
                     /locus_tag="JN001_001855"
     CDS             2083..3891
                     /gene="frdA"
                     /locus_tag="JN001_001855"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY9053108.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3884..4618
                     /locus_tag="JN001_001856"
     CDS             3884..4618
                     /locus_tag="JN001_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY9053109.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4629..5024
                     /gene="frdC"
                     /locus_tag="JN001_001857"
     CDS             4629..5024
                     /gene="frdC"
                     /locus_tag="JN001_001857"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY9053110.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5035..5394
                     /gene="frdD"
                     /locus_tag="JN001_001858"
     CDS             5035..5394
                     /gene="frdD"
                     /locus_tag="JN001_001858"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY9053111.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5457..6590
                     /gene="blaEC"
                     /locus_tag="JN001_001859"
     CDS             5457..6590
                     /gene="blaEC"
                     /locus_tag="JN001_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY9053112.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6679..7212
                     /locus_tag="JN001_001860"
     CDS             6679..7212
                     /locus_tag="JN001_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY9053113.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGLFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(7209..7526)
                     /locus_tag="JN001_001861"
     CDS             complement(7209..7526)
                     /locus_tag="JN001_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY9053114.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7708..7854)
                     /gene="ecnB"
                     /locus_tag="JN001_001862"
     CDS             complement(7708..7854)
                     /gene="ecnB"
                     /locus_tag="JN001_001862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY9053115.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(7965..8090)
                     /gene="ecnA"
                     /locus_tag="JN001_001863"
     CDS             complement(7965..8090)
                     /gene="ecnA"
                     /locus_tag="JN001_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY9053116.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8142..8708)
                     /gene="efp"
                     /locus_tag="JN001_001864"
     CDS             complement(8142..8708)
                     /gene="efp"
                     /locus_tag="JN001_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY9053117.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8750..9799
                     /gene="epmB"
                     /locus_tag="JN001_001865"
     CDS             8750..9799
                     /gene="epmB"
                     /locus_tag="JN001_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY9053118.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10173..11042
                     /locus_tag="JN001_001866"
     CDS             10173..11042
                     /locus_tag="JN001_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053119.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
     gene            complement(11245..11598)
                     /locus_tag="JN001_001867"
     CDS             complement(11245..11598)
                     /locus_tag="JN001_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4156 domain-containing protein"
                     /protein_id="HAY9053120.1"
                     /translation="MHVKYLAGIVGAALLMAGCSSSNELSAAGQSVRIVDEQPGAECQ
                     LIGTATGKQSNWLSGQHGEEGGSMRGAANDLRNQAAAMGGNVIYGISSPSQGMLSSFV
                     PTDSQIIGQVYKCPN"
     gene            complement(11736..13382)
                     /gene="groL"
                     /locus_tag="JN001_001868"
     CDS             complement(11736..13382)
                     /gene="groL"
                     /locus_tag="JN001_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120975.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HAY9053121.1"
                     /translation="MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSF
                     GAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITE
                     GLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGK
                     LIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESP
                     FILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAV
                     KAPGFGDRRKAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVINKDTTTIID
                     GVGEEAAIQGRVAQIRQQIEEATSDYDREKLQERVAKLAGGVAVIKVGAATEVEMKEK
                     KARVEDALHATRAAVEEGVVAGGGVALIRVASKLADLRGQNEDQNVGIKVALRAMEAP
                     LRQIVLNCGEEPSVVANTVKGGDGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAA
                     SVAGLMITTECMVTDLPKNDAADLGAAGGMGGMGGMGGMM"
     gene            complement(13426..13719)
                     /locus_tag="JN001_001869"
     CDS             complement(13426..13719)
                     /locus_tag="JN001_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004391824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HAY9053122.1"
                     /translation="MNIRPLHDRVIVKRKEVETKSAGGIVLTGSAAAKSTRGEVLAVG
                     NGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVEA"
     gene            13995..15251
                     /gene="yjeH"
                     /locus_tag="JN001_001870"
     CDS             13995..15251
                     /gene="yjeH"
                     /locus_tag="JN001_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine/branched-chain amino acid
                     transporter"
                     /protein_id="HAY9053123.1"
                     /translation="MSGLKQELGLAQGIGLLSTSLLGTGVFAVPALAAQVAGNNSLWA
                     WPVLIILVFPIAIVFAILGRHYPCAGGVAHFVGMAFGSRLERVTGWLFLSVIPVGLPA
                     ALQIAAGFGQAMFGWHSWQLLLAELGTLALVWYIGTRSASSSANLQTVIAGLIVALIV
                     AIWWAGDIKPANIPFPAPGNIELTGLFAALSVMFWCFVGLEAFAHLASEFKNPERDFP
                     RALMIGLLLAGLVYWGCTVVVLHFDAYGEKMAAAASLPKIVVQLFGVGALWIACVIGY
                     LACFASLNIYIQSFARLVWSQAQHNPDHYLARLSSRHIPNNALNAVLGCCVVSTLVIH
                     ALEINLDALIIYANGIFIMIYLLCMLAGCKLLQGRYRLLAVVGGLLCVLLLAMVGWKS
                     LYALIVLAGLWLLLPKRKTPENGIIT"
     gene            complement(15267..15743)
                     /gene="fxsA"
                     /locus_tag="JN001_001871"
     CDS             complement(15267..15743)
                     /gene="fxsA"
                     /locus_tag="JN001_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418564.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HAY9053124.1"
                     /translation="MRWLPFIAIFLYVYIEISIFIQVAHVLGVLLTLVLVIFTSVIGM
                     SLVRNQGFKNFVLMQQKMAAGENPAAEMIKSVSLIIAGLLLLLPGFFTDFLGLLLLLP
                     PVQKHLTVKLMPHLRFSRMPGGGFSAGTGGGNTFDGEYQRKDDERDRLDHKDDRQD"
     gene            16080..17516
                     /gene="aspA"
                     /locus_tag="JN001_001872"
     CDS             16080..17516
                     /gene="aspA"
                     /locus_tag="JN001_001872"
                     /EC_number="4.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313147.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate ammonia-lyase"
                     /protein_id="HAY9053125.1"
                     /translation="MSNNIRIEEDLLGTREVPADAYYGVHTLRAIENFYISNNKISDI
                     PEFVRGMVMVKKAAAMANKELQTIPKSVANAIIAACDEVLNNGKCMDQFPVDVYQGGA
                     GTSVNMNTNEVLANIGLELMGHQKGEYQYLNPNDHVNKCQSTNDAYPTGFRIAVYSSL
                     IKLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNI
                     QRTAELLLEVNLGATAIGTGLNTPKEYSPLAVKKLAEVTGFPCVPAEDLIEATSDCGA
                     YVMVHGALKRLAVKMSKICNDLRLLSSGPRAGLNEINLPELQAGSSIMPAKVNPVVPE
                     VVNQVCFKVIGNDTTVTMAAEAGQLQLNVMEPVIGQAMFESVHILTNACYNLLEKCIN
                     GITANKEVCEGYVYNSIGIVTYLNPFIGHHNGDIVGKICAETGKSVREVVLERGLLTE
                     AELDDIFSVQNLMHPAYKAKRYTDESEQ"
     gene            17634..18935
                     /locus_tag="JN001_001873"
     CDS             17634..18935
                     /locus_tag="JN001_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY9053126.1"
                     /translation="MLVVELIIVLLAIFLGARLGGIGIGFAGGLGVLVLAAIGVKPGN
                     IPFDVISIIMAVIAAISAMQVAGGLDYLVHQTEKLLRRNPKYITILAPIVTYFLTIFA
                     GTGNISLATLPVIAEVAKEQGVKPCRPLSTAVVSAQIAITASPISAAVVYMSSVMEGH
                     GISYLHLLSVVIPSTLLAVLVMSFLVTMLFNSKLSDDPIYRKRLEEGLVELRGEKQIE
                     IKSGAKTSVWLFLLGVVGVVIYAIINSPSMGLVEKPLMNTTNAILIIMLSVATLTTVI
                     CKVDTDNILNSSTFKAGMSACICILGVAWLGDTFVSNNIDWIKDTAGEVIQGHPWLLA
                     VIFFFASALLYSQAATAKALMPMALALNVSPLTAVASFAAVSGLFILPTYPTLVAAVQ
                     MDDTGTTRIGKFVFNHPFFIPGTLGVALAVCFGFVLGSFML"
     gene            19051..19389
                     /gene="cutA"
                     /locus_tag="JN001_001874"
     CDS             19051..19389
                     /gene="cutA"
                     /locus_tag="JN001_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divalent cation tolerance protein CutA"
                     /protein_id="HAY9053127.1"
                     /translation="MLDEKSSNTASVVVLCTAPDEATAQDLAAKVLAEKLAACATLIP
                     GATSLYYWEGKLEQEYEVQMILKTTVSHQQALLECLKSHHPYQTPELLVLPVTHGDTD
                     YLSWLNASLR"
     gene            19365..21062
                     /locus_tag="JN001_001875"
     CDS             19365..21062
                     /locus_tag="JN001_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD"
                     /protein_id="HAY9053128.1"
                     /translation="MAQRIFTLILLLCSTSVFAGLFDAPGRSQFVPADQAFTFDFQQN
                     QHDLNLTWQIKDGYYLYRKQIRITPEHAKIADVQLPQGVWHEDEFYGKSEIYRDRLTL
                     PVTINQASAGATLTVTYQGCADAGFCYPPETKTVPLSEVVANNAASQPVSVSQQEQHT
                     AQLPFSALWALLIGIGIAFTPCVLPMYPLISGIVLGGKQRLSTARALLLTFIYVQGMA
                     LTYTALGLVVAAAGLQFQAALQHPYVLIGLAIVFTLLAMSMFGLFTLQLPSSLQTRLT
                     LMSNRQQGGSPGGVFVMGAIAGLICSPCTTAPLSAILLYIAQSGNMWLGGGTLYLYAL
                     GMGLPLMLITVFGNRLLPKSGPWMEQVKTAFGFVILALPVFLLERVIGDVWGLRLWSA
                     LGVAFFGWAFITSLQAKRGWMRVVQIILLAAALVSVRPLQDWAFGATHTAQTQTHLNF
                     TQIKTVDELNHALVEAKGKPVMLDLYADWCVACKEFEKYTFSDPQVQKALADTVLLQA
                     NITANDAQDVALLKHLNVLGLPTILFFDGQGQEHPQARVTGFMDAETFSAHLRDRQP"
     gene            21099..21674
                     /locus_tag="JN001_001876"
     CDS             21099..21674
                     /locus_tag="JN001_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9053129.1"
                     /translation="MQREDVLGEALKLLELQGIANTTLEMVAERVDYPLDELRRFWPD
                     KEAILYDALRYLSQQIDVWRRQLMLDETQTAEQKQLARYQALSECVKNNRYPGCLFIA
                     ACTFYPDPGHPIHQLADQQKSAAYDFTHELLTTLEVDDPAMVAKQMELVLEGCLSRML
                     VNRSQADVDTAHRLAEDILRFARCRQGGALT"
     gene            21781..21856
                     /locus_tag="JN001_001877"
     tRNA            21781..21856
                     /locus_tag="JN001_001877"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:21814..21816,aa:Phe,seq:gaa)
     gene            22054..>23030
                     /locus_tag="JN001_001878"
     CDS             22054..>23030
                     /locus_tag="JN001_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY9053130.1"
                     /translation="MALTDAKIRAAKPTDKAYKLTDGTGMFLLVHPNGSRYWRLRYRI
                     LGKEKTLALGVYPEVSLSEARTKRDEARKLISEGVDPCEQKRAKKVVPDLQLSFEHIA
                     RRWHASNKQWAQSHSDKVLKSLETHVFPFIGNRDITTLNTPDLLIPVRAAEAKQIYEI
                     ASRLQQRISAVMRYAVQSGIIRYNPALDMAGALTTVKRQHRPALDLSRLPELLSRIGS
                     YKGQTVTQLAVMLNLLVFIRSSELRYARWSEIDIDNAMWTIPAEREPLPGVKFSHRGS
                     KMRTPHLVPLSKQAVAILTELQTWAGENGLIFTGAHDPRKPISENVMNAS"
BASE COUNT         5738 a         5942 c         5700 g         5650 t
ORIGIN      
        1 gcccaccatt taataacaaa atagtaatgc ttactaacag caatactaaa ttcagacaca
       61 ttactgcaat accgcccacc gcagtaatgc gggcaatttt attaatcccc tttgaagcaa
      121 cgacggtgac cagaatcatc catgctactg ccagcagacc aaccacctgc gtaggctcca
      181 gtccggcaat acgccagtgc tgggtcatgt cgctaccata gaggaatgtt gagaacggta
      241 cccaaacttt cgcggaggta ctcaccatcc agatgatata agaggaaaac cacataaacg
      301 taccaatgaa ggcaaaacgt ggtccgacac tattattcat ccaggaatag ataccacctt
      361 cttctttgcg ataagcagct cccatttcag ccatcattaa ggcgaatgga ataaagaata
      421 acaatgcaga aaatatataa aagggaatcg cactataacc cattaagtaa taagccgatg
      481 ggctattggc aaatccaaat acggaagtaa agatcatcaa tatgagtcct atcagactca
      541 tcttttttat cgtgtgaggc atgaaaccat ccttcatttc agcgcgtgta taacacgtgc
      601 ccactgaact gcactgcgca acattgagca ggcagcgtaa aaaccaatac agaattgata
      661 cccggatgat atcaaatatc cagtcttaaa ttgtggcctt taacggaaaa atgaaaacat
      721 atgctacaga atggcgctta tcacgccatt cttcgctgtt aattcagtaa tttttcagaa
      781 ttatgcccgg tcaacgctaa aggcgatgac ttcagccagt gtctccgcgc ccagcgccaa
      841 catcaccaga cgatcaacac ctaatgccac gccggaacag tcaggcatac cgactttcaa
      901 ggcttcaatc agattctggt caatggggtg ctgcggcaaa ccgcgcgccg cgcgcttacg
      961 gttatcttgt tcaaagcgtt gttgctgctc acgggcatcc gttaattcat ggaaaccatt
     1021 cgccagctca atacctttat aataaacctc aaagcgttca gcgacccgat gatcttcggt
     1081 actgatttgc gccagtgatg cctggctggc tggaaagtgg tacacaaagg tcggtttttc
     1141 tttgccaata tttggctcta cgccaaaggt aaacagcaat tgtagcaacg tgtcgcggtc
     1201 ttcttcggta tcagcaacgt tactcaaatt cagtttcgct gcgacttccc gcagttgcgt
     1261 tttgtcggca gagagcgggt caatttccag ataacgcaag aaagcttgtt gataagaaag
     1321 gctttctgct gccgggcagt ccagcacctg ttgtaagaga tcgtccacct cgttcatcaa
     1381 ccggtacata tcatagtgcg gtcgatacca ctcaagcata gtgaactcag ggttgtgata
     1441 acgccccatc tcttcattac ggaagctgcg gcacagctgg aataccggcc cacaaccggc
     1501 aaccagcagg cgtttcatat ggtattccgg gctggtcatt aaccagagat tcatcccctg
     1561 cgaatgcccg gggccaacga aacgtgtctc aaacgggacc aaatgaatat cggttaccgt
     1621 cgcctggctc atacaaggcg tctccacctc cagcactcca cgatcagcaa agaaacgacg
     1681 gatctccgcc ataatcgccg cgcgttttaa taagttagga atggatgcgc tcggctgcca
     1741 ggatgccgtt tcgctcatag ttaaatctcc agtttttgac aagggcacga agtctactcg
     1801 caacgcgacg gcgagacaaa ttttacgcag gaatcaaaca gcggtgggca gtgactaaaa
     1861 aaagcacgat ctgatggttt agtaattaaa ttaatcatct tcagtgataa tttagccctc
     1921 ttgcgcacta aaaaaatcga tctcgtcaaa tttcagactt atccatcaga ctatactgtt
     1981 gtacctataa aggagcagtg gaatagcgtt cgcagaccgt aactttcagg cacttaccct
     2041 gaagtacggg gctgtgggat aaaaacaatc tggaggaatg tcgtgcaaac ctttcaagcc
     2101 gatcttgcca ttgtaggcgc cggtggcgcg ggattacgtg ctgcaattgc tgccgcgcag
     2161 gcaaatccaa atgcaaaaat cgcactaatc tcaaaagtat acccgatgcg tagccatacc
     2221 gttgctgcag aagggggctc cgccgctgtc gcgcaggatc atgacagctt cgaatatcac
     2281 tttcacgata cagtagcggg tggcgactgg ttgtgtgagc aggatgtcgt ggattatttc
     2341 gtccaccact gcccaaccga aatgacccaa ctggaactgt gggggtgccc atggagccgt
     2401 cgcccggatg gtagcgtcaa cgtacgtcgc ttcggcggca tgaaaatcga gcgcacctgg
     2461 ttcgccgccg ataagaccgg cttccatatg ctgcacacgc tgttccagac ctctctgcaa
     2521 ttcccgcaga tccagcgttt tgacgaacat ttcgtgctgg atattctggt tgatgatggt
     2581 catgttcgcg gcctggtagc aatgaacatg atggaaggca cgctggtgca gatccgtgct
     2641 aacgcggtcg ttatggctac tggcggtgcg ggtcgcgttt atcgttacaa caccaacggc
     2701 ggcatcgtta ccggtgacgg tatgggtatg gcgctaagcc acggcgttcc gctgcgtgac
     2761 atggaattcg ttcagtatca cccaaccggt ctgccaggtt ccggtatcct gatgaccgaa
     2821 ggctgccgtg gtgaaggcgg tattctggtc aacaaaaatg gctaccgtta tctgcaagat
     2881 tacggcatgg gcccggaaac tccgctgggc gagccgaaaa acaaatatat ggaactgggt
     2941 ccacgcgaca aagtttctca ggccttctgg cacgaatggc gtaaaggcaa caccatctcc
     3001 acgccgcgtg gcgatgtggt ttatctcgac ttgcgtcacc tcggcgagaa aaaactgcat
     3061 gaacgtctgc cgttcatctg cgaactggcg aaagcgtacg ttggcgtcga tccggttaaa
     3121 gaaccgattc cggtacgtcc gaccgcacac tacaccatgg gcggtatcga aaccgatcag
     3181 aactgtgaaa cccgcattaa aggtctgttc gccgtgggtg aatgttcctc tgttggtctg
     3241 cacggtgcaa accgtctggg ctccaactcc ctggcggaac tggtggtctt cggccgtatg
     3301 gccggtgaac aagcgacaga gcgtgcagca actgccggta atggcaacga agaggcaatt
     3361 gaagcgcagg cagctggcgt tgaacaacgt ctgaaagatc tggttaacca ggatggcggc
     3421 gaaaactggg cgaagatccg cgacgaaatg ggcctagcaa tggaagaagg ttgcggtatc
     3481 taccgtacgc cggaactgat gcagaaaacc atcgacaagc tggcagagct gcaggaacgc
     3541 ttcaagcgcg tgcgcatcac cgacacctcc agcgtgttca acaccgacct gctctacacc
     3601 attgaactgg gccacggtct gaacgttgct gaatgtatgg cgcactccgc aatggcacgt
     3661 aaagagtccc gcggcgcaca ccagcgtctg gacgaaggtt gcaccgagcg tgacgacgtc
     3721 aacttcctca aacacaccct cgccttccgc gatgctgatg gcacgactcg cctggagtac
     3781 agcgacgtga agattactac gctgccgcca gctaaacgcg tttacggtgg cgaagcggat
     3841 gcagccgata aggcggaagc agccaataag aaggagaagg cgaatggctg agatgaaaaa
     3901 cctgaaaatt gaggtggtgc gctataaccc ggaagtcgat accgcaccgc atagcgcatt
     3961 ctatgaagtg ccttatgacg caactacctc attactggat gcgctgggct acatcaaaga
     4021 caacctggca ccggacctga gttaccgctg gtcctgccgt atggcgattt gtggttcctg
     4081 cggcatgatg gttaacaacg tgccaaaact ggcatgtaaa accttcctgc gtgattacac
     4141 cgacggtatg aaggttgaag cgttagctaa cttcccgatt gaacgcgatc tggtggtcga
     4201 tatgacccac ttcatcgaaa gtctggaagc gatcaaaccg tacatcatcg gcaactcccg
     4261 caccgcggat cagggtacta acatccagac cccggcgcag atggcaaagt atcaccagtt
     4321 ctccggttgc atcaactgtg gtctgtgcta cgccgcgtgc ccgcagtttg gcctgaaccc
     4381 agagttcatc ggtccggctg ccattacgct ggcgcatcgt tataacgaag atagccgcga
     4441 ccacggtaag aaggagcgta tggcgcagtt gaacagccag aacggcgtat ggagctgtac
     4501 tttcgtgggc tattgctccg aagtctgccc gaaacacgtc gatccggctg cggccattca
     4561 gcagggcaaa gtagaaagtt cgaaagactt tcttatcgcg accctgaaac cacgctaagg
     4621 agtgcaacat gacgactaaa cgtaaaccgt atgtacggcc aatgacgtcc acctggtgga
     4681 aaaaattgcc gttttatcgc ttttacatgc tgcgcgaagg cacggcggtt ccggctgtgt
     4741 ggttcagcat tgaactgatt ttcgggctgt ttgccctgaa aaatggcccg gacgcctggg
     4801 cgggattcgt cgacttttta caaaacccgg ttatcgtgat cattaacctg atcactctgg
     4861 cggcagctct gctgcacacc aaaacctggt ttgaactggc accgaaagcg gccaatatca
     4921 ttgtaaaaga cgaaaaaatg ggaccagagc caattatcaa aagtctctgg gcggtaactg
     4981 tggttgccac catcgtaatc ctgtttgttg ccctgtactg gtaaggagcc tgagatgatt
     5041 aatccaaatc caaagcgttc tgacgaaccg gtattctggg gcctcttcgg ggccggtggt
     5101 atgtggagcg caattattgc gccggtgatg atcctgctgg tgggtattct gctgccactg
     5161 gggctgtttc cgggtgatgc gctgagctac gagcgcgttc tggcgttcgc gcagagcttc
     5221 attggtcgcg tattcctgtt cctgatgatc gttctgccgc tgtggtgtgg tttacaccgt
     5281 atgcaccacg cgatgcacga tctgaaaatt cacgtgcctg cgggcaaatg ggttttctac
     5341 ggtctggctg ctatcctgac agttgtcacg ctgattggta tcgttacaat ctaacgtatc
     5401 gccaatgtaa atccggcccg cctatggcgg gccgttttgt atggaaacca gaccttatgt
     5461 tcaaaacgac gctctgcgcc ttattaatta ccgcctcttg ctccacattt gctgcccctc
     5521 aacaaatcaa cgatattgtg catcgcacaa ttaccccgct tatagagcaa caaaagatcc
     5581 ccggtatggc ggtggcggta atttatcagg gtaaacctta ttactttacc tggggctatg
     5641 cggacatcgc caaaaagcag cccgtcacac agcaaacgtt gtttgagtta ggttcggtca
     5701 gcaaaacatt tacgggcgtg cttggtggcg atgctattgc tcgaggggaa atcaagttaa
     5761 gcgatcccgc aacaaaatac tggcctgaac ttaccgctaa acagtggaat gggatcacac
     5821 tattacatct tgcgacctac accgctggcg gcctgccatt gcagatgccg gatgaagtga
     5881 aatcctcaag cgacttgctg cgcttctatc aaaactggca gcctgcatgg gctccaggaa
     5941 cacaacgtct gtatgccaac tccagtatcg gtttgttcgg cgcactggct gtgaagccgt
     6001 ctggtttgag ttttgagcag gcgatgcaaa ctcgtgtctt ccagccactc aaactcaacc
     6061 atacgtggat taatgtaccg cccgcagaag aaaagaatta cgcctgggga tatcgcgaag
     6121 gcaaggcagt tcatgtttcg ccaggggcgt tagatgctga agcttatggt gtgaagtcga
     6181 ccattgaaga tatggcccgc tgggtgcaaa gcaatttaac cccccttgat atcaatgaga
     6241 aaacgcttca acaagggata caactggcac aatctcgcta ctggcaaacc ggcgatatgt
     6301 atcagggcct gggctgggaa atgctggact ggccggtcaa tcctgacagc atcattaacg
     6361 gcagtgacaa taaaattgca ctggcagcac gcccggtaaa agcgattaag cccccaactc
     6421 ctgcagtacg cgcatcatgg gtacataaaa cgggggcgac cggcggattt ggtagctatg
     6481 tcgcgtttat tccagaaaaa gagctgggta tcgtgatgct ggctaacaaa aactatccca
     6541 atccagcgag agtcgccgcc gcctgtcaga ttctcaacgc tctacagtaa aatttcatcg
     6601 ggtccgaatt ttcggacctt ttctgcgctt ttccttgctg tcatctacac ttagaaaaaa
     6661 accagtaagg aaacatttat gcgcctgctc cctctcgttg ccgcagcgac agctgcattt
     6721 ctggtcgttg cctgcagttc tcctacgccg ccgcgtggcg tgacagtagt gaataatttc
     6781 gacgctaaac gctatctcgg tacctggtat gagattgccc gttttgatca ccgttttgaa
     6841 cgtggactgg aaaaagtcac cgcaacatac agtctgcgtg atggcggcgg cctgaatgtc
     6901 atcaataaag gctataaccc tgacagagaa atgtggcagc agagtgaagg gaaagcgtac
     6961 tttaccggcg caccaacacg cgctgcgctg aaagtgtcat tctttggtct tttctatggc
     7021 ggttataacg tcattgcact tgatcgggaa taccgccatg cgctggtttg cggcccggac
     7081 cgcgactacc tgtggatact ctcccgcacg ccaaccattt ctgacgaagt gaaacaggag
     7141 atgctggcag tcgcgacccg ggaagggttt gatgtcagta agtttatttg ggtacagcag
     7201 cccggtagtt agtgagtgct gagtttcaga ccaataatcc ccaatacgat taacgccaga
     7261 ctcgccaggc gcatcgggtt agcggactca ccgagcagca caatgccggt gatagccgcg
     7321 ccgactgcgc caatacccgt ccacacggca taagccgtcc ctactggtaa cgatttcatc
     7381 gcccaggcaa gtagcgccat actgacaatc atcgccgtca cggtaataac actcggcgtc
     7441 aaacgactaa agccgtgggt atatttcagg ccaacggccc ataccacttc cagcagacca
     7501 gcaataacta agataatcca ggacatatca ggctccggag aattggggcc gtccccggtg
     7561 aaaagacgcg tttgcaggtc gtcctgcaaa gctgatggtt gaacggatat tttgccaggt
     7621 ggcaggggaa tttcaactat taccttagtg actatcgcag aaaaaacaaa cggcacgaca
     7681 cagctgtcgt accgttattg cttattgcta ttgctgcgct ttcgttgctg cgccagaaat
     7741 cgcgttaccg ccatcagaaa tgtcttcacc aacgccacgc gtggtgttgc aggcagttaa
     7801 tactgttgaa agcaccagaa cagaaaagat cgctgcaatt gtcttcttca ccataacgtc
     7861 ttccttttag gtaatgttat ttatgtttgc ctatagcaaa ttaataatag acaacatcgc
     7921 caaaaatgac ggaaatctga tgatttttcg gaagagaaga aaaattagct ggcagcgcga
     7981 gagatggagt tgccgagatg tttgatgtct tcgccgaaac cgcgagcggt gttacagccc
     8041 gtgagcagcg tactggcaag caaaacaaga acgataaggc gtttcatcat ctctgacctg
     8101 aataagtgat ggtgcagcct gcaggccgca ccacaaccgc attacttcac gcgagagacg
     8161 tattcaccag agcgggtatc cactttgatg acttcgccga tttgtacgaa cagcggaacc
     8221 ttaaccacag cgccagtaga cagggtagcc ggtttgccgc cagtacctgc ggtatcacct
     8281 ttcaggcccg gatcggtatc aacgatttcc agttcaacga agttcggcgg agtaacggag
     8341 atcggctgac cattccacag agttacgata cactctgcct gatccagcag ccatttagcg
     8401 ttatcgccaa ttgcttttgc atcagcagac agctgctcga aagtttcgtt gttcatgaag
     8461 tgccagaact caccgtcgtt gtacaggtaa gtcaggttca tatcgacaac atcagcgcct
     8521 tcagcggaat cagtagattt gaaggttttt tctacgcgag taccggtcag cagacgacgc
     8581 agtttaacgc gagcaaatgc ctggccttta cccggtttta cgaattcact cgcttcaacc
     8641 gcgtaaggtt cgccgtctaa catgatttta agaccagcac gaaaatcgtt gctatagtac
     8701 gttgccataa ggccctctga aatttgttaa ttggtagcta agccacaaaa tggcgcatat
     8761 tgtaacccta aataccccat ccagagaaga ttggttaacg caacttgccg atgttgtgac
     8821 cgatcctgat gaacttctgc gtcttttgaa tatagacgcg gacgaaaaac tgttggccgg
     8881 acgcagcgcc aaaaagctgt ttgccctgcg tgtgccccgc tcatttatcg atcgcatgga
     8941 gaaaggcaat ccggacgatc ctcttttgcg tcaggtactt acctcgcaag atgagtttgt
     9001 cgtcgcgtcc ggattctcca ccgacccact ggaagaacag cacagcgtag tgcctggttt
     9061 gttgcataaa taccacaacc gggcgctttt gctggtcaaa ggcggctgcg cggtaaattg
     9121 ccgctattgc ttccgtcgcc acttccccta tgccgaaaat cagggcaaca agcgtaactg
     9181 gcagactgca cttgagtatg ttgctgcgca tccggaactg gacgagatga ttttctccgg
     9241 cggcgatccg ctgatggcga aagatcacga gctggactgg ttgctcacac aactggaagc
     9301 catcccgcat atcaaacgtc tgcggattca cagtcgtctg ccgattgtga tcccggcacg
     9361 catcacagat gcgctggttg aacgcttttc acattctacg ctgcaaatcc tgctggtgaa
     9421 tcacatcaac catgccaatg agatagatga aacattccgt caggcgatgg ctaagttgcg
     9481 ccgggtaggc gttactttgc tgaaccagag cgttctgtta cgtgatgtga acgataacgc
     9541 acaaacgctg gcaaacctga gtaatgcgtt gttcgatgcc ggcgtgatgc cgtattacct
     9601 gcatgtgctc gataaagtac agggcgcagc gcattttatg gtgagtgatg acgaagcacg
     9661 gcagattatg cgtgagttgc tgacattggt gtcgggatat ctggtgccga aactggcgcg
     9721 agaaattggc ggcgaaccca gcaaaacgcc gctggatctc cagctacgcc agcagttact
     9781 gattaaacag ggaagttaaa cattaaaatt gcctgatgcg ctacgcttat caggcctaca
     9841 tcgtgcattg aaattgaatg gatttgcaat gaactgtagg ccggataagg cgtttacgcc
     9901 gcatccggca agagcaacaa acgcaagtac agcaacctgt cattaaactg agaaatttaa
     9961 tctttgcccg ttgcataacc tttaattatt catatgcatt gctgttgtta ctttttatat
    10021 agctaacacc aataattaac ctttcttttc tgtttatata gagtgagcac ggctatttat
    10081 gttattttaa caactgttac taccaagccc atttatctgg cttataaatt aaaattaatt
    10141 atttaattga gaaatggtta gggagaacct acatggccat aagcatcaag ggtgttaata
    10201 ccggtgttat tcgcaagagt aataatttca ttgcactggc gctgaaaatt aaagaacctc
    10261 gcaataaaga atcgttgttc tttatgtctg tcatggaact gcgcgacctg ctgattgcgc
    10321 tggaaagtcg tctgcatcaa aagcataaac tggatgctgc tgcacgcctt cagtatgagc
    10381 aagctcgcga taaagtcatt aagaaaatgg cagaaaacat cccagaaatt ctggttgatg
    10441 agcttaaaaa tgccgatatt aatcgtcggg ttaacacgct ggaacttacc gataatcaag
    10501 gcgaaaatct taccttcgta ttaacgctac atgacggtag caaatgtgag ttagtcgtca
    10561 atgagttgca gattgaaatg ctagcgcgag caatcattca tgcaattaat aatgcggaaa
    10621 tgcgtgaact ggcattacgt attacctcac tgttagattt cctgccgtta tatgacgttg
    10681 actgccagga aaatggcaat ctggaatatg acacctattc ccaaccggaa tggaaacata
    10741 acttgttcga ccattatctg gcggtgcttt accgctttaa agatgaaagt ggcaaagaac
    10801 aatttagcgg cgcagtggtg aaaacgcgtg aagcaacgcc gggtaaagaa gtagaggcga
    10861 tcactcgccg aatgcttgat ttcagcccac gactgaaaaa actcgcgggt gtgccatgtc
    10921 aggtctatgt tcgcaccgta gcggcgaata acgcccaacc gctaacccag gatcaatgct
    10981 tacgcgcgct gcatcactta cgtgttcaat ccaccagcaa aactgcacca caggcgaaat
    11041 aatctcatct ttgctaatgc gaggctggag ccatccagcc tgaaatgact gataacgtga
    11101 tcgttggtca tgccggatgc ggcgtaaacg ccttatccgg cctacaaatt ctcaagcatt
    11161 caatcagttg caatgcctgc tgtaggcctg ataagcgaag cgcatcaggc aataatacgt
    11221 ttgtcaccca gcctctggat cacatcagtt cgggcactta taaacctgac cgataatctg
    11281 gctatccgtc gggacaaaac tggacaacat tccctgcgac gggctgctga tgccataaat
    11341 cacgttaccg cccattgcag ccgcctggtt gcgcagatcg tttgctgcgc cgcgcataga
    11401 accgccctct tctccgtgtt gcccggaaag ccagttgctt tgcttacctg tcgcagtacc
    11461 aatcagctgg cactctgcgc ctggctgctc gtccacaatg cgtacactct gaccggcagc
    11521 actcaattcg ttgctggagc tacaacccgc catcagtagc gcggcaccga caatccctgc
    11581 taagtatttt acgtgcatgt tattccccat aatcaatgag ctggacgcca ctcgcgtcgt
    11641 ccgtgtctga atcttatact agaaagatga ccaaaagaaa aacccccaga catttctgcc
    11701 cgggggtttg tttatttctg cgaggtgcag ggcaattaca tcatgccgcc catgccaccc
    11761 atgccgccca taccgccagc agcgcctaag tcagctgcat cgtttttcgg caggtcggta
    11821 accatgcact cggtggtgat catcaggcca gccacagaag ccgcgtactg cagagcagaa
    11881 cgggttactt tggttggatc caagataccc atgtcgatca tgttgccgta ttcttcggtt
    11941 gctgcgttgt aaccgtagtt gccgtcgccg cctttaacag tgttagcaac aacagacggt
    12001 tcttcgccgc agttcaatac gatctgacgc agcggagctt ccattgcacg cagtgcaact
    12061 ttgataccca cgttctggtc ttcgttctga ccacgcaggt cagccagttt agacgctacg
    12121 cggatcagcg caacaccacc accagcaacc acgccttctt ctaccgcagc acgggtcgcg
    12181 tgcagggcat cttcaacgcg tgcttttttc tctttcattt caacttcggt agcagcacct
    12241 actttgataa ctgcaacgcc gcctgccagt ttcgctacgc gctcctgcag tttttcacgg
    12301 tcgtagtcag aagttgcttc ttcaatctgc tgacggatct gagcaacacg gccctggatt
    12361 gcagcttctt cacccacgcc atcaatgatg gtggtggtgt ctttgttgat cacaacacgt
    12421 ttagcctgac ccaggtcttc cagggttgct ttttccagct ccataccgat ctcttcagag
    12481 attacggtac cgccagtcag ggttgcgata tcctgcagca tagctttacg gcgatcgccg
    12541 aagcccggag ctttaaccgc agcaactttc acgatgccac gcatggtgtt aacaaccaga
    12601 gttgccagcg cttcgccttc aacatcttca gcgatgatca gcagcggttt acctgcttta
    12661 gcaacggctt ccagaaccgg cagcatttcg cggatgttgg agattttctt gtcagccagc
    12721 aggatgaacg ggctttccag ttctactgcg ccagtttccg gcttgttgat gaagtaagga
    12781 gacaggtagc cacggtcgaa ctgcatacct tcaaccacgt ccagttcgtc ctgcagaccg
    12841 gtaccgtctt caacggtgat aacgccttct ttaccgactt tgtccatcgc ttcagcgatc
    12901 agtttaccta cggtttcgtc ggagttagcg gagatggtac caacctgagc aatcgcttta
    12961 gagtcagagc atggtacgga cagcgctttc agttcttcaa ctgcagcggt aacagctttg
    13021 tcgataccac gtttcaggtc catcgggttc atgcccgcag caactgcttt cagaccctca
    13081 gtgatgatag cctgagccag tacggttgca gtggtggtac cgtcgcctgc agcgtcgttc
    13141 gctttagagg caacttcttt caccatctgc gcacccatat tttcgaactt gtcttccagt
    13201 tcgatttcac gagcaacgga aacaccatct ttggtgatgg tcggtgcacc gaaagattta
    13261 tccagaacta cgttacggcc tttcggaccg agggtaactt tcactgcatc tgccagtacg
    13321 tttacgccgc gcagcatttt cacacgagcg tcgttaccga attttacgtc tttagctgcc
    13381 attatcttta ttccttaaat tcgtatgttc agtgtcgtgc gaggattacg cttcaacaat
    13441 tgccagaatg tcgctttcgg acatgatcaa cacttcttca ttgtcgatct tctcagattt
    13501 cacaccgtag ccatcgttga aaataacgat gtcgccaact ttcacatcca gcggcttcac
    13561 ttcgccattt tcaaggatac ggccattgcc gacagccagc acttcgccgc gggtggattt
    13621 agccgctgca gagccggtca gaacgatgcc gccagcagat ttagtttcaa cttctttacg
    13681 cttgacgatc acgcgatcat gcaatggacg aatattcatt gataactctc ctttgagaaa
    13741 gtccgtatct gttatgggtg acgccggagc ttacgtggtt tcccggctgg tgaccagaga
    13801 aatggggatg aggattcgcc ccttcaaggg ggaaaaagaa aaaaaattct gatcagcaca
    13861 aaatcgggtg aaaaccctga ttcacctcac atttcatcgc aatttcttca tcgccgtcat
    13921 aagcgaatct gattgtgcta ccatcgaaaa tctacgcagt tgcccaaaat ttgggcgcaa
    13981 tcggatatca acccatgagt ggactcaaac aagaactggg gctggcccag ggcattggcc
    14041 tgctatcgac gtcattatta ggcaccggcg tgtttgccgt tcctgcgtta gctgcacagg
    14101 tagcaggcaa taacagcctg tgggcgtggc ccgttttgat tatcttagtg ttcccgattg
    14161 cgattgtgtt tgcgattctg ggtcgccact atccctgcgc aggcggtgtc gcgcacttcg
    14221 tcggtatggc gtttggttcg cggcttgagc gagtcaccgg ctggttgttt ttatcggtca
    14281 ttcccgtggg tttgccagcc gcgctacaaa ttgccgccgg gttcggccag gcaatgtttg
    14341 gctggcatag ctggcaactg ttgttggcag aactcggtac gctggcgctg gtgtggtata
    14401 tcggtactcg cagtgccagt tccagtgcta atctacaaac cgttattgcc ggacttatcg
    14461 tcgcgctgat tgtcgctatc tggtgggcgg gcgatatcaa acctgcgaat atccccttcc
    14521 cggcacctgg taatatcgaa cttaccgggt tatttgctgc gttatcagtg atgttctggt
    14581 gttttgtcgg tctggaagca tttgcccatc ttgcctcgga atttaaaaat ccagagcgtg
    14641 attttcctcg cgcattgatg attggtctgc tgctggcagg attagtctac tggggctgta
    14701 cggtagtcgt cttacacttc gacgcctatg gtgaaaaaat ggcggcggca gcatcgcttc
    14761 caaaaattgt agtgcaactg ttcggtgtag gagcgttatg gattgcctgc gtgattggct
    14821 atctggcctg ctttgccagt ctcaacattt atatacagag cttcgcccgc ctggtctggt
    14881 cgcaggcgca acataatcct gaccactacc tggcacgcct ctcttctcgc catatcccga
    14941 ataatgccct caatgcggtg ctcggctgct gtgtggtgag cactttggtg attcatgctt
    15001 tagagatcaa tctggacgct cttattattt atgccaatgg catctttatt atgatttatc
    15061 tgttatgcat gctggcaggc tgtaaattat tgcaaggacg ttatcgacta ctggcggtgg
    15121 ttggcgggct gttatgcgtt ctgttactgg caatggtcgg ctggaaaagt ctctatgcgc
    15181 tgatcgtgct ggcggggtta tggctgttgc tgccaaaacg aaaaacgccg gaaaatggca
    15241 taatcacata atccggcgtt tcgacattaa tcctggcgat cgtctttatg atcaaggcgg
    15301 tcgcgctcat catcctttcg ctggtactca ccatcaaaag tattaccgcc accggtcccg
    15361 gcgctaaaac cgccgcctgg catacgagaa aagcgcaaat gcggcatcaa cttcactgtc
    15421 agatgctttt gcaccggcgg taataaaagc agaagaccga ggaagtcggt gaaaaagccc
    15481 ggtaataaaa gcagcaaacc ggcaatgatc agcgaaacac ttttaatcat ctccgccgct
    15541 gggttttcac ccgccgccat tttttgctgc atcagcacga aattcttaaa gccctggtta
    15601 cgtaccagtg acatcccgat aactgacgtg aatataacca gcacgagggt cagcaatacc
    15661 cccaatacat gggcaacctg aataaagatt gaaatctcaa tatagacata aaggaaaatg
    15721 gcaataaaag gtaaccagcg caaaggtttc tcctgtaata gcagccggta aaacccggct
    15781 acctgaatgg gttgcgaatc gcgttcagct tatattgtgg tcattagcaa aatttcaaga
    15841 tgtttgcgca actatttttg gtagtaatcc caaagcggtg atctatttca caaattaata
    15901 attaaggggt aaaaaccgac acttaaagtg atccagatta cggtagaaat cctcaagcag
    15961 catatgatct cgggtattcg gtcgatgcag gggataatcg tcggtcgaaa aacattcgaa
    16021 accacatata ttctgtgtgt ttaaagcaaa tcattggcag cttgaaaaag aaggttcaca
    16081 tgtcaaacaa cattcgtatc gaagaagatc tgttgggtac cagggaagtt ccagctgatg
    16141 cctactatgg tgttcacact ctgagagcga ttgaaaactt ctatatcagc aacaacaaaa
    16201 tcagtgatat tcctgaattt gttcgcggta tggtaatggt taaaaaagcc gcagctatgg
    16261 caaacaaaga gctgcaaacc attcctaaaa gtgtagcgaa tgccatcatt gccgcatgtg
    16321 atgaagtcct gaacaacgga aaatgcatgg atcagttccc ggtagacgtc taccagggcg
    16381 gcgcaggtac ttccgtaaac atgaacacca acgaagtgct ggccaatatc ggtctggaac
    16441 tgatgggtca ccagaaaggt gaatatcagt acctgaaccc gaacgaccat gttaacaaat
    16501 gtcagtccac taacgacgcc tacccgaccg gtttccgtat cgcagtttac tcttccctga
    16561 ttaagctggt agatgcgatt aaccaactgc gtgaaggctt tgaacgtaaa gctgtcgaat
    16621 tccaggacat cctgaaaatg ggtcgtaccc agctgcagga cgcagtaccg atgaccctcg
    16681 gtcaggaatt ccgcgctttc agcatcctgc tgaaagaaga agtgaaaaat atccaacgta
    16741 ccgctgaact gctgctggaa gttaaccttg gcgcaacagc aatcggtact ggtctgaaca
    16801 cgccgaaaga gtactctccg ctggcagtga aaaaactggc tgaagtcact ggcttcccat
    16861 gcgtaccggc tgaagacctg atcgaagcga cctctgactg cggcgcttat gttatggttc
    16921 acggcgcgct gaaacgcctg gctgtgaaga tgtccaaaat ctgtaacgac ctgcgcttgc
    16981 tctcttctgg cccacgtgcc ggcctgaacg agatcaacct gccggaactg caggcgggct
    17041 cttccatcat gccagctaaa gtaaacccgg ttgttccgga agtggttaac caggtatgct
    17101 tcaaagtcat cggtaacgac accactgtta ccatggcagc agaagcaggt cagctgcagt
    17161 tgaacgttat ggagccggtc attggccagg ccatgttcga atccgttcac attctgacca
    17221 acgcttgcta caacctgctg gaaaaatgca ttaacggcat cactgctaac aaagaagtgt
    17281 gcgaaggtta cgtttacaac tctatcggta tcgttactta cctgaacccg ttcatcggtc
    17341 accacaacgg tgacatcgtg ggtaaaatct gtgccgaaac cggtaagagt gtacgtgaag
    17401 tcgttctgga acgcggtctg ttgactgaag cggaacttga cgatattttc tccgtacaga
    17461 atctgatgca cccggcttac aaagcaaaac gctatactga tgaaagcgaa cagtaatcgt
    17521 acagggtagt acaaataaag aaggcacgtc agatgacgtg ccttttttct tgtgaacagt
    17581 aacttaaaaa caacaaccta atatcaactt gttaaaaaac aaggaaggct aatatgctag
    17641 ttgtagaact catcatagtt ttgctggcga tcttcttggg cgccagattg gggggaatag
    17701 gtattggttt tgcaggcgga ttgggggtgc tggttcttgc cgctattggc gttaaacccg
    17761 gtaacatccc gttcgatgtc atttccatta tcatggcggt tatcgccgct atttctgcca
    17821 tgcaggttgc tggcggtctg gactatctgg ttcatcagac agaaaagctg ctgcgccgta
    17881 acccgaaata catcacgatc ctcgcaccta tcgtgaccta tttcctgaca atctttgctg
    17941 gtactggcaa catctctctg gcgacactgc cagttatcgc tgaagttgcg aaggaacaag
    18001 gcgttaaacc ttgccgtccg ctctctactg cagtggtatc cgcgcagatt gcgatcaccg
    18061 catcgccaat ctcagcggca gtggtttaca tgtcttccgt gatggaaggt catggcatca
    18121 gctacctcca tctgctctcc gtggtcatcc cgtccaccct gctggcggtt ctggtgatgt
    18181 cctttctggt cactatgctg ttcaactcca aactctctga cgatccgatt tatcgcaagc
    18241 gtctggaaga gggcctggtt gaactgcgcg gtgaaaagca gattgaaatc aaatccggtg
    18301 caaaaacgtc cgtctggctg ttcctgctgg gcgtagttgg cgtggttatc tatgcaatca
    18361 tcaacagccc aagcatgggt ctggttgaaa aaccgctgat gaacaccacc aacgcaatcc
    18421 tgatcatcat gctcagcgtt gcaactctga ccaccgttat ctgtaaagtc gataccgaca
    18481 acatcctcaa ctccagcacc ttcaaagcag gtatgagcgc ctgtatttgt atcctgggtg
    18541 ttgcgtggct gggcgatact ttcgtttcca acaacatcga ctggatcaaa gataccgctg
    18601 gtgaagtgat tcagggtcat ccgtggctgc tggccgtcat cttcttcttt gcttctgctc
    18661 tgctgtactc tcaggctgca accgcaaaag cactgatgcc gatggctctg gcactgaacg
    18721 tttcaccgct gaccgctgtt gcttctttcg ctgcggtgtc tggtctgttc attctgccga
    18781 cctacccgac gctggttgct gcggtacaga tggatgacac gggtactacc cgtatcggta
    18841 aattcgtctt caaccatccg ttcttcatcc cgggtactct gggtgttgcc ctggccgttt
    18901 gcttcggctt cgtgctgggt agcttcatgc tgtaatgatc aatcgcgggg cgttcacgcc
    18961 ccgctttctt tcccgccgac taacatcctt cccccgtacg ttgtatagtg acctctctct
    19021 tgcggttcca tctgttcttg cgaggtgttt atgcttgatg aaaaaagttc gaataccgcg
    19081 tctgtcgtgg tgctatgtac ggcaccagat gaagcgacag cccaggattt agctgccaaa
    19141 gtgctggcgg aaaaactggc ggcctgcgcg accttgatcc ccggcgctac ctctctctat
    19201 tactgggaag gtaagctgga gcaagaatac gaagtgcaga tgattttaaa aactaccgta
    19261 tctcaccagc aggcactgct ggaatgcctg aagtctcatc atccatatca aaccccggaa
    19321 cttctggttt tacctgttac acacggagac acagattacc tctcatggct caacgcatct
    19381 ttacgctgat cctgctactt tgcagcactt ccgtttttgc cggattattc gacgcgccgg
    19441 gacgttcaca atttgtcccc gcggatcaag cctttacttt tgattttcag caaaaccaac
    19501 atgaccttaa tctgacctgg cagatcaaag acggttacta cctctaccgt aaacagatcc
    19561 gcattacgcc ggaacacgcg aaaattgccg acgtgcagct gccgcaaggc gtctggcatg
    19621 aagatgagtt ttacggcaaa agcgagattt accgcgatcg gctgacgctt cccgtaacca
    19681 tcaaccaggc gagtgcggga gcgacgttaa ctgtcaccta ccagggctgt gctgatgccg
    19741 gtttctgtta tccgccagaa accaaaaccg ttccgttaag cgaagtggtc gccaacaacg
    19801 cagcgtcaca gcctgtgtct gtttcgcagc aagagcagca caccgcgcaa ttgccctttt
    19861 ccgcgctctg ggcgttgttg atcggtattg gtatcgcctt tacgccatgc gtgctgccaa
    19921 tgtacccact gatttctggc atcgtgctgg gtggtaaaca gcggctctcc actgccagag
    19981 cattgttgct gacctttatt tatgtgcagg ggatggcact gacttacacg gcgctgggtc
    20041 tggtagttgc cgccgcaggg ttacagttcc aggcggcgct acagcaccca tacgtgctca
    20101 ttggcctcgc catcgtcttt accttgctgg cgatgtcaat gtttggcttg tttactctac
    20161 aactcccctc ttcgctgcaa acacgtctca cgttgatgag caatcgccaa cagggcggct
    20221 cacctggcgg tgtgtttgtt atgggggcga ttgccggact tatctgttca ccatgcacca
    20281 ccgcaccgct tagcgcgatt ctgctgtata tcgcccaaag cgggaacatg tggctgggcg
    20341 gcggcacgct ttatctctat gcgttgggca tgggcctgcc gctgatgcta attaccgtct
    20401 ttggtaaccg cttgctgccg aaaagcggcc cgtggatgga acaagtcaaa accgcgtttg
    20461 gttttgtgat cctcgcactg ccggtcttcc tgctggagcg agtgattggt gatgtatggg
    20521 gattacgctt gtggtcggcg ctgggtgtcg cattctttgg ctgggccttt atcaccagcc
    20581 tacaggctaa acgcggttgg atgcgcgtgg tgcaaataat cctgctggca gcggcattgg
    20641 ttagcgtgcg cccacttcag gattgggcat ttggtgcgac gcataccgcg caaactcaga
    20701 cgcatctcaa ctttacacaa atcaaaacgg tagatgagtt aaatcatgcg ctcgttgaag
    20761 ccaaaggcaa accggtgatg ttagatcttt atgccgactg gtgcgtcgcc tgtaaagagt
    20821 ttgagaaata caccttcagc gacccgcagg tgcaaaaagc gttagcagac acggtcttac
    20881 ttcaggccaa catcacggcc aacgacgcac aagatgtggc gctgttaaag catcttaatg
    20941 tccttggcct accgacaatt ctcttttttg acggacaagg ccaggagcat ccacaagcac
    21001 gcgtcacggg ctttatggat gctgaaacct tcagcgcaca tttgcgcgat cgccaaccgt
    21061 gaacgacact tgcagcggga aagacggagg aaaatagcgt gcaacgtgaa gatgtactgg
    21121 gagaagccct gaaattatta gaattacaag ggattgccaa caccacgctg gagatggttg
    21181 ctgaacgtgt ggattatcca ctggacgagc tacgccgctt ctggccagac aaagaggcaa
    21241 tcctctacga tgcgctgcgt tatcttagcc aacagataga tgtctggcgt cgtcagctga
    21301 tgctggacga aacgcaaacc gccgaacaaa agcagctggc acgttatcag gcgttatcgg
    21361 agtgcgttaa aaacaaccgc tatccgggct gtctatttat cgctgcctgt acgttttatc
    21421 ccgatcctgg ccaccctatt catcaactgg ccgatcagca aaaaagcgcg gcctacgatt
    21481 tcacccacga actgttaacc acactggaag ttgacgatcc ggcgatggta gcaaagcaga
    21541 tggaactggt gctggaaggc tgtttaagcc gaatgctggt gaatcgtagc caggcggatg
    21601 tcgacactgc acatcggctg gcggaagata tcctgcgctt cgcccgctgc cgccagggtg
    21661 gtgcattgac ctgacagaaa cacagaaaag aagcgatttg ccgcaatctt aagcagttga
    21721 atcgctttta ctgaaattag gttgacgaga tgtgcagatt acggtttaat gcgccccgtt
    21781 gcccggatag ctcagtcggt agagcagggg attgaaaatc cccgtgtcct tggttcgatt
    21841 ccgagtccgg gcaccaaatt catatcaacg gacctctacg gaggttcgtt tttcgtttca
    21901 gaacgccacg atttaagcgt tctgcctaca aatcaattct accgaactca accagattcc
    21961 ccccacatca accccattgt gtgggtataa ttgcgggcat accccagttc gacagaattt
    22021 gtaccctctt taacgcattc agaaggctga actatggcac tgactgacgc aaaaatccgg
    22081 gctgcaaagc ccactgacaa ggcttataaa ctcactgacg ggactggcat gttcctgctg
    22141 gtacatccta atggctcccg ttactggcgt ctccgttatc gtattctggg taaggagaag
    22201 actctggcac ttggtgtgta tccagaagtt tctctctccg aagctcgtac aaaacgggat
    22261 gaggcccgaa aactgatttc ggagggggtt gacccttgcg aacagaaaag agctaaaaaa
    22321 gtagtccctg atttacagct ctcttttgaa catattgcgc gacgctggca tgccagtaat
    22381 aaacaatggg cacaatcaca cagcgataaa gtactcaaaa gcctcgagac tcacgttttc
    22441 ccctttatcg gcaaccggga tatcacaaca ctcaataccc cggatctgct tatccctgtt
    22501 cgtgctgcag aagctaaaca aatttatgaa atcgccagtc gtctgcagca aagaatatct
    22561 gccgtaatgc gttatgccgt acagtctggc atcatcagat ataatcctgc tctggatatg
    22621 gctggcgcat tgactacggt aaaacgccag catcgccccg ctcttgatct ttctcgcctg
    22681 cctgaacttt tgtcgcgtat tggcagttac aaagggcaaa ctgtcaccca gcttgccgtt
    22741 atgctgaatt tactggtttt tattcgttcc agtgaactca gatacgcccg ctggtctgaa
    22801 attgatattg acaatgccat gtggactatt ccagccgaac gcgaacccct gccaggcgta
    22861 aaattctcac accggggctc caagatgcga acaccacatc ttgtgccact cagcaaacag
    22921 gctgtagcca tactgacaga actacagaca tgggctggtg aaaatggtct gatctttacg
    22981 ggagcacatg acccgcgtaa accaatcagt gaaaatgtaa tgaacgcatc
//
LOCUS       DADMJE010000053        22931 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.054, whole genome shotgun sequence.
ACCESSION   DADMJE010000053 DADMJE010000000
VERSION     DADMJE010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22931)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22931)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22931
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.054"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..745)
                     /locus_tag="JN001_001879"
     CDS             complement(<1..745)
                     /locus_tag="JN001_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053131.1"
                     /translation="MAMSEQTQPVAGAAASTTKARTSFGILGAISLSHLLNDMIQSLI
                     LAIYPLLQSEFSLTFMQIGMITLTFQLASSLLQPVVGYWTDKYPMPWSLPIGMCFTLS
                     GLVLLALAGSVGAVLLAAALVGTSSSVFHPESSRVARMASGGRHGLAQSIFQVGGNFG
                     SSLGPLLTAVIIAPYGKGNVAWFVLAALLAIVVLAQISRWYSAQHRMNKGKPKATIIN
                     PLPRNKVVLAVSILLILIFSKYFYMASISS"
     gene            963..2615
                     /locus_tag="JN001_001880"
     CDS             963..2615
                     /locus_tag="JN001_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY9053132.1"
                     /translation="MKLLQRGVALALLTTFTLASETALAYEQDKTYKITVLHTNDHHG
                     HFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTGVPESDLQDAEPDFR
                     GMNLVGYDAMAIGNHEFDNPLTVLRQQEKWAKFPLLSANIYQKSTGERLFKPWALFKR
                     QDLKIAVIGLTTDDTAKIGNPEYFTDVEFRKPADEAKLVIQELQQTEKPDIIIAATHM
                     GHYDNGEHGSNAPGDVEMARALPAGSLAMIVGGHSQAPVCMAAENKKQVDYVPGTPCK
                     PDQQNGIWIVQAHEWGKYVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVL
                     YTPEIAENQQMISLLSPFQNKGKAQLEVKIGETNGRLEGDRDKVRFVQTNMGRLILAA
                     QMDRTGADFAVMSGGGIRDSIEAGDISYKNVLKVQPFGNVVVYADMTGKEVIDYLTAV
                     AQMKPDSGAYPQFANVSFVTKDGKLNDLKIKGEPVDPAKTYRMATLNFNATGGDGYPR
                     LDNKPGYVNTGFIDAEVLKAYIQKSSPLDVSVYEPKGEVSWQ"
     gene            complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JN001_001881"
     CDS             complement(2652..3131)
                     /gene="ybaK"
                     /locus_tag="JN001_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006818871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase YbaK"
                     /protein_id="HAY9053133.1"
                     /translation="MTPAVKLLEKNKISFQIHTYEHDPAETNFGDEVVKKLGLNPDQV
                     YKTLLVAVNGDMKHLAVAVTPVAGQLDLKKVAKALGAKKVEMADPMAAQRSTGYLVGG
                     ISPLGQKKRLPTIIDAPAQEFATIYVSGGKRGLDIELAAGDLAKILDAKFADIARRD"
     gene            complement(3335..4129)
                     /locus_tag="JN001_001882"
     CDS             complement(3335..4129)
                     /locus_tag="JN001_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053134.1"
                     /translation="MDLLYRVKTLWAALRGNHYTWPAIDITLPGNRHFHLIGSIHMGS
                     HDMTPLPTRLLKKLKNADALIVEADVSTSDTPFANLPTCEALEERINEEQLQNLQHIS
                     QEMGISPSLFSTQPLWQIAMVLQATQAQKLGLRAEYGIDYQLLQAAKQQHKPVIELEG
                     AENQITMLLQLPDKGLALLDDTLTHWHTNARLLQQMMSWWLNAPPQNNDITLPNTFSQ
                     SLYDVLMHQRNLAWRDKLRAMPPGRYVVAVGALHLYGEGNLPQMLR"
     gene            4267..4608
                     /locus_tag="JN001_001883"
     CDS             4267..4608
                     /locus_tag="JN001_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415016.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HigA family addiction module antidote protein"
                     /protein_id="HAY9053135.1"
                     /translation="MKQATRKPTTPGDILLYEYLEPLDLKINELAELLHVHRNSVSTL
                     INNNRKLTTEMAFRLAKVFDTIVDFWLNLQAAVDLWEVENNMRTQEELGRIETVAEYL
                     ARREERAKKVA"
     gene            complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JN001_001884"
     CDS             complement(4823..7327)
                     /gene="copA"
                     /locus_tag="JN001_001884"
                     /EC_number="7.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-exporting P-type ATPase CopA"
                     /protein_id="HAY9053136.1"
                     /translation="MSQTIDLTLDGLSCGHCVKRVKESLEQRPDVEQADVSITEAHVT
                     GTASAEQLIETIKQAGYDASVSHPKAKPLAESSIPSEALTAVSEALPAATADDDDSQQ
                     LLLSGMSCASCVTRVQNALQSVPGVTQARVNLAERTALVMGSASPQDLVQAVEKAGYG
                     AEAIEDDAKRRERQQETAVATMKRFRWQAIVALAVGIPVMVWGMIGDNMMVTADNRSL
                     WLVIGLITLAVMVFAGGHFYRSAWKSLLNGAATMDTLVALGTGVAWLYSMSVNLWPQW
                     FPMEARHLYYEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTAEGEK
                     SVPLAEVQPGMLLRLTTGDRVPVDGEITQGEAWLDEAMLTGEPIPQQKGEGESVHAGT
                     VVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALI
                     SAAIWYFFGPAPQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFGVLVRDA
                     DALQRASTLDTVVFDKTGTLTEGKPQVVAVKTFADVDEAQALRLAAALEQGSSHPLAR
                     AILDKAGDMQLPQVNGFRTLRGLGVSGEAEGHALLLGNPALLNDQQVDTKAIEADISA
                     QASQGATPVLLAIDGKVVALLAVRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA
                     IAKEAGIDEVIAGVLPDGKAEAIKRLQSEGRQVAMVGDGINDAPALAQADVGIAMGGG
                     SDVAIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSIGIPVAAGILWP
                     FTGTLLNPVVAGAAMALSSITVVSNANRLLRFKPKE"
     gene            7589..8521
                     /gene="glsA"
                     /locus_tag="JN001_001885"
     CDS             7589..8521
                     /gene="glsA"
                     /locus_tag="JN001_001885"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase A"
                     /protein_id="HAY9053137.1"
                     /translation="MLDANKLQQAVDQAYTQFHSLNGGQNADYIPFLANVPGQLAVVA
                     IVTCDGNVYSAGDSDYRFALESISKVCTLALALEDVGPQAVQDKIGADPTGLPFNSVI
                     ALELHGGKPLSPLVNAGAIATTSLINAENIEQRWQRILHIQQQLAGEQVALSDEVNQS
                     EQTTNFHNRAIAWLLYSAGYLYCDAMEACDVYTRQCSTLINTVELATLGATLAAGGLN
                     PLTHKRVLQADNVPYILAEMMMEGLYGRSGDWAYRVGLPGKSGVGGGILAVVPGVMGI
                     AAFSPPLDEEGNSVRGQKMVASVAKQLGYNVFKG"
     gene            8524..9816
                     /locus_tag="JN001_001886"
     CDS             8524..9816
                     /locus_tag="JN001_001886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9053138.1"
                     /translation="MMNTEGNNGNKPLGLWNVVSIGIGAMVGAGIFALLGQAALLMEA
                     STWVAFAFGGIVAMFSGYAYARLGASYPSNGGIIDFFRRGLGNGVFSLALSLLYLLTL
                     AVSIAMVAHAFGAYAVQFLHEGSQEEHLILLYALGSIAVMTLFNSLSNHAVGRLEVIL
                     VGIKMMILLLLIIAGVWSLQPAHISVSAPPSSGAFFSCIGITFLAYAGFGMMANAADK
                     VKDPQVIMPRAFLVAIGVTTLLYISLALVLLSDVSALELEKYADTAVAQAASPLLGHV
                     GYVIVVIGALLATASAINANLFAVFNIMDNMGSERELPKLMNKSLWRQSTWGNIIVVV
                     LIMLMTAALNLGSLASVASATFLICYLAVFVVAIRLRHDIHASLPILIVGTLVMLLVI
                     VGFIYSLWSQGSRALIWIIGSLLLSLIVAMVMKRNKTV"
     gene            9941..10348
                     /locus_tag="JN001_001887"
     CDS             9941..10348
                     /locus_tag="JN001_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CueR"
                     /protein_id="HAY9053139.1"
                     /translation="MNISDVAKITGLTSKAIRFYEEKGLVTPPMRSENGYRTYTQQHL
                     NELTLLRQARQVGFNLEESGELVNLFNDPQRHSADVKRRTLEKVAEIERHIEELQSMR
                     DQLLALANACPGDDSADCPIIENLSGCCHHRAG"
     gene            complement(10349..10807)
                     /locus_tag="JN001_001888"
     CDS             complement(10349..10807)
                     /locus_tag="JN001_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415021.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HAY9053140.1"
                     /translation="MMELMVVHPHIFWLSLGGLLLAAEMLGGNGYLLWSGVAAVITGL
                     VVWLVPLGWEWQGVMFAILTLLAAWLWWKWLSRRVREQKHSDSHLNQRGQQLIGRRFV
                     LESPLVNGRGHMRVGDSSWPVSASEDLGAGTHVEVIAIEGITLHIRAVSS"
     gene            complement(10804..11721)
                     /locus_tag="JN001_001889"
     CDS             complement(10804..11721)
                     /locus_tag="JN001_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH/Band 7/PHB domain protein"
                     /protein_id="HAY9053141.1"
                     /translation="MLIFIPILIFVALVIVGAGVKIVPQGYQWTVERFGRYTKTLQPG
                     LSLVVPFMDRIGRKINMMEQVLDIPSQEVISKDNANVTIDAVCFIQVIDAPRAAYEVS
                     NLELAIINLTMTNIRTVLGSMELDEMLSQRDSINSRLLRIVDEATNPWGIKVTRIEIR
                     DVRPPAELISSMNAQMKAERTKRAYILEAEGIRQAEILKAEGEKQSQILKAEGERQSA
                     FLQAEARERSAEAEARATKMVSEAIASGDIQAVNYFVAQKYTEALQQIGSSSNSKVVM
                     MPLEASSLMGSIAGIAELVKDSANKRTQP"
     gene            11867..12544
                     /gene="fetA"
                     /locus_tag="JN001_001890"
     CDS             11867..12544
                     /gene="fetA"
                     /locus_tag="JN001_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter ATP-binding protein FetA"
                     /protein_id="HAY9053142.1"
                     /translation="MQENSPLLQLQNVGYLAGDAKILNNINFSLRAGEFKLITGPSGC
                     GKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEIYRQQVSYCAQTPTLFGDTVYDNLI
                     FPWQIRNRQPDPAIFLDFLERFALPDSILTKNIAELSGGEKQRISLIRNLQFMPKVLL
                     LDEITSALDESNKHNVNEMIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQ
                     EARYELA"
     gene            12531..13310
                     /gene="fetB"
                     /locus_tag="JN001_001891"
     CDS             12531..13310
                     /gene="fetB"
                     /locus_tag="JN001_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308581.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron export ABC transporter permease subunit
                     FetB"
                     /protein_id="HAY9053143.1"
                     /translation="MNSHNITNESLALALMLVVVAILISHKEKLALEKDIFWSVGRAI
                     IQLIIVGYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVG
                     AGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKL
                     SLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQ
                     IMVTFMLLSTASLSTIIACYLTYRKFYNSRHQLVVTQLKKK"
     gene            complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JN001_001892"
     CDS             complement(13373..14227)
                     /gene="cnoX"
                     /locus_tag="JN001_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308582.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperedoxin"
                     /protein_id="HAY9053144.1"
                     /translation="MSVENIVNINESNLQQVLEQSMTTPVLFYFWSERSQHCLQLTPI
                     LESLAAQYNGQFILAKLDCDAEQMIAAQFGLRAIPTVYLFQNGQPVDGFQGPQPEEAI
                     RALLDKVLPREEELKAQQAMQLMQEGNYTDALPLLKDAWQLSNQNGEIGLLLAETLIA
                     LNRSEDAEAVLKTIPLQDQDTRYQGLVAQIELLKQAADTPEIQQLQQQVAENPEDAAL
                     ATQLALQLHQVGRNEEALELLFGHLRKDLTAADGQTRKTFQEILAALGTGDALASKYR
                     RQLYALLY"
     gene            complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JN001_001893"
     CDS             complement(14288..15097)
                     /gene="ybbO"
                     /locus_tag="JN001_001893"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY9053145.1"
                     /translation="MTHKATEILTGKVMQKSVLITGCSSGIGLESALELKRQGFHVLA
                     GCRKPDDVERMNNMGFTGVLIDLDSPESVDRAADEVIALTDNCLYGIFNNAGFGMYGP
                     LSTISRAQMEQQFSANFFGAHQLTMRLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYA
                     ASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARF
                     TLGPEAVVDKVRHAFISEKPKMRYPVTLVTWAVMVLKRLLPGRVMDKILQG"
     gene            complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JN001_001894"
     CDS             complement(15087..15710)
                     /gene="tesA"
                     /locus_tag="JN001_001894"
                     /EC_number="3.1.1.5"
                     /EC_number="3.1.2.14"
                     /EC_number="3.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005225520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional acyl-CoA thioesterase I/protease
                     I/lysophospholipase L1"
                     /protein_id="HAY9053146.1"
                     /translation="MNFNNVFRWHLPFLFLVLLTFRAAAADTLLILGDSLSAGYRMSA
                     SAAWPALLNDKWQSKTSVVNASISGDTSQQGLARLPALLKQHQPRWVLVELGGNDGLR
                     GFQPQQTEQTLRQILQDVKAANAEPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVP
                     LLPFFMEEVYLKPQWMQDDGIHPNRDAQPFIADWMAKQLQPLVNHDS"
     gene            15681..16367
                     /locus_tag="JN001_001895"
     CDS             15681..16367
                     /locus_tag="JN001_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9053147.1"
                     /translation="MPAENIVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALVGE
                     SGSGKSTLLAILAGLDDGSSGEVSLVGQPLHNMDEEARAKLRAKHVGFVFQSFMLIPT
                     LNALENVELPALLRGESSAESRNGAKALLEQLGLGKRLDHLPAQLSGGEQQRVALARA
                     FNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLIMVTHDLQLAARCDRCLR
                     LVNGQLQEEA"
     gene            16364..18376
                     /locus_tag="JN001_001896"
     CDS             16364..18376
                     /locus_tag="JN001_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000561880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9053148.1"
                     /translation="MIARWFWREWRSPSLLIVWLALSLAVACVLALGNISDRMEKGLS
                     QQSREFMAGDRALRSSREVPQAWLEEAQKRGLKVGKQLTFATMTFAGDTPQLANVKAV
                     DDIYPMYGDLQTNPPGLKPQAGSVLLAPRLMALLNLKTGDTIDVGDATLRIAGEVIQE
                     PDSGFNPFQMAPRLMMNLADVDKTGAVQPGSRVTWRYKFGGNENQLDGYEKWLLPQLK
                     PEQRWYGLEQDEGALGRSMERSQQFLLLSALLTLLLAVAAVAVAMNHYCRSRYDLVAI
                     LKTLGAGRAQLRKLIVGQWLMVLTLSAVTGGAIGLLFENVLMVLLKPVLPAALPPASL
                     WPWLWALGTMTVISLLVGLRPYRLLLATQPLRVLRNDVVANVWPLKFYLPIVSMVVVL
                     LLAGLMGGSMLLWAVLAGAVVLALLCGVLGWMQLNVLCRMTLKSLPLRLAVSRLLRQP
                     WSTLSQLSAFSLSFMLLALLLVLRCDLLDRWQQLPPESPNYFLINIATEQVAPLKAFL
                     AEHHIVPESFYPVVRARLTAINDKPTEGNEDEALNRELNLTWQNTRPDHNPIVAGNWP
                     PKADEVSMEEGLAKRLNVALGGTVTFMGDTQEFRAKVTSLRKVDWESLRPNFYFIFPE
                     GALDGQPQSWLTSFRWENGNGMLTQLNRQFPTISLLDIGAILKQVG"
     gene            18377..18775
                     /locus_tag="JN001_001897"
     CDS             18377..18775
                     /locus_tag="JN001_001897"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HAY9053149.1"
                     /translation="MLEQVSRALEVMVVLVTACGMLLLLAQVQVGMRQRHQELVVWRT
                     LGAGKKLLRTTLWCEFAMLGFVSGLVAAIGAETALAVLQAKVFDFPWEPDWRLWIVLP
                     CSGALLLSLFGGWLGARLVKGKALFRQFAG"
     gene            19204..22931
                     /locus_tag="JN001_001898"
                     /pseudo
     CDS             19204..22931
                     /locus_tag="JN001_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; internal stop; incomplete; missing
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
BASE COUNT         5287 a         6005 c         6484 g         5155 t
ORIGIN      
        1 agctgctgat gctcgccata tagaaatatt tcgagaaaat gaggattaac agaatgctga
       61 ctgccagtac cactttgttg cgcggcagtg gattgattat cgtcgctttg ggttttcctt
      121 tattcattcg gtgctgtgcc gagtaccaac ggctaatttg cgccaacacc acgatcgcca
      181 gcagtgccgc aagcacaaac caggcaacgt tgcctttgcc ataaggcgcg ataatcaccg
      241 ccgtcagcaa gggtcccagg gaactgccaa agttgccgcc gacctgaaag atagattgcg
      301 ccaggccatg ccgcccgccg gaagccatac gggctacgcg agaagattcc ggatgaaaga
      361 ccgatgaact ggtaccgacc agcgccgccg ccagcagaac tgcgccaaca ctgcccgcca
      421 gcgcaagcag caccagacca cttaaggtaa agcacatgcc aattggcaac gaccacggca
      481 tcggatattt atcggtccag tagccgacca ctggttgcag tagcgaagag gcgagctgga
      541 aggtgagggt tatcatgcca atctgcataa atgtcagaga aaattctgac tgaagcagag
      601 gataaatcgc cagaatcagc gattggatca tgtcgttcag cagatgtgag aggctgatag
      661 cacctaaaat accaaacgat gttcgggcct tggtcgttga cgcagccgcg cccgccacag
      721 gctgggtttg ttcactcatt gccataggaa agtcactttt tcagggttgc gatgtaaaga
      781 atgatcttat ttgtgattat tacccgacta acatacctgt aagcgtcgcc tgaaggaagt
      841 ctcaacgccg aatacagaat ttctaatctg gatgcagatt tatcttcacc ggacgcagac
      901 ttgtctatta tgttgcgtca tactattttt caacacgttg aaatcaggtc agggagagaa
      961 gtatgaaatt attgcagcgg ggcgtggcgt tagcgctgtt aaccacattt acactggcga
     1021 gtgaaactgc tctggcgtat gagcaggata aaacctacaa aattacagtt ctgcatacca
     1081 atgatcatca tgggcatttt tggcgcaatg aatatggcga atatggtctg gcggcgcaaa
     1141 aaacgctggt ggatggtatc cgcaaagagg ttgcggctga aggcggtagc gtgctgctac
     1201 tttccggtgg cgacattaac actggcgtgc ccgagtctga cttacaggat gccgaacctg
     1261 attttcgcgg tatgaatctg gtgggctatg acgcgatggc gatcggtaat catgaatttg
     1321 ataatccgct caccgtatta cgccagcagg aaaagtgggc caagttcccg ttgctttccg
     1381 cgaatatcta ccagaaaagt accggcgagc gcctgtttaa accatgggcg ctgtttaagc
     1441 gtcaggatct gaaaattgcc gtcattgggc tgacaaccga tgacacagca aaaattggta
     1501 acccggaata cttcactgat gtcgaatttc gtaagcccgc cgatgaagcg aagctggtga
     1561 ttcaggagct gcaacagaca gaaaagccag acattattat cgcggcgacc catatggggc
     1621 attacgataa tggtgagcac ggctctaacg caccgggcga tgtggagatg gcacgcgcgc
     1681 tgcctgccgg atcgctggcg atgatcgtcg gtggtcactc gcaagctccg gtctgcatgg
     1741 cggcagaaaa caaaaaacag gtcgattacg tgccgggtac gccatgcaaa ccagatcaac
     1801 aaaacggcat ctggattgtg caggcgcatg agtggggcaa atacgtggga cgggctgatt
     1861 ttgagtttcg taatggcgaa atgaaaatgg ttaactacca gctgattccg gtgaacctga
     1921 agaagaaagt gacctgggaa gacgggaaaa gcgagcgcgt gctttacact cctgaaatcg
     1981 ctgaaaacca gcaaatgatc tcgctgttat cgccgttcca gaacaaaggc aaagcgcagt
     2041 tggaagtgaa aataggcgaa accaatggtc gtctggaagg cgatcgtgac aaagtgcgtt
     2101 ttgtacagac caatatgggg cggttgattc tggcagccca aatggatcgc actggtgccg
     2161 actttgcggt gatgagtgga ggaggaattc gtgattctat cgaagcaggc gatatcagct
     2221 ataaaaacgt actgaaagtg cagccattcg gcaatgtggt ggtgtatgcc gacatgaccg
     2281 gtaaagaggt gattgattac ctgaccgccg tcgcacaaat gaagccagat tcaggtgcct
     2341 acccgcaatt tgccaacgtt agctttgtga cgaaagacgg caaactcaac gacctgaaaa
     2401 tcaaaggcga accggtcgat ccggcgaaaa cttaccgtat ggcgacatta aacttcaatg
     2461 ccaccggcgg tgatggctat ccgcgccttg ataacaaacc gggctatgtg aataccggct
     2521 ttattgatgc cgaagtgctg aaagcgtata tccagaaaag ctcgccgctg gatgtgagtg
     2581 tttatgaacc gaaaggtgag gtgagctggc agtaatccga aagtgccgga tatttgcatc
     2641 cggcacaatg cttaatcgcg gcgggcgata tcagcaaatt tggcatcgag gatcttcgcc
     2701 agatcgcctg ccgccagttc gatatccagt ccgcgcttgc cgccagaaac ataaatagtg
     2761 gcaaattctt gtgcgggggc gtcgataatc gtcggcagac gttttttctg ccccagtggg
     2821 ctaatccccc caaccaggta tcccgtcgaa cgctgcgcgg ccatcggatc ggccatctca
     2881 actttcttgg cacccagcgc ttttgctact tttttaagat ccagttgacc tgcgaccggc
     2941 gtaacggcca ctgccagatg tttcatatca ccgttcactg ccaccagtag cgttttgtag
     3001 acttgatccg gattcaaacc taattttttg acgacttcat cgccaaaatt ggtttcagcc
     3061 ggatcgtgct cgtaggtatg gatttgaaac gaaatcttgt ttttttcgag taatttaact
     3121 gcgggtgtca tggtaatttt cctgccttaa acaaaaaaac gaagcaagca tacgcctgat
     3181 ggcggtccaa aaaaaagagt catcttgcct aagagtattg gcaggatggt gagattgagc
     3241 gacaatcgag ttacaccgtc gcttaaagtg acggcataat aataaaaaaa tgaaattcct
     3301 ctttgacggg ccaatagcga tattggccat ttttttagcg caacatttgc ggcaaattcc
     3361 cttctccata caggtgtagt gcaccgaccg cgaccacata tcgccccggc ggcatggcgc
     3421 gtaatttatc ccgccaggcg agatttcgct gatgcatcag cacatcgtac agcgactgac
     3481 tgaacgtatt gggcagcgtt atatcattat tttgcggagg tgcattcagc caccagctca
     3541 tcatttgttg cagcaaccgt gcgttggtat gccagtgggt cagcgtatcg tccagcagcg
     3601 ccagtccttt gtcagggagc tggagcaaca tggtaatctg gttttcagcc ccttccagtt
     3661 caatcacggg tttatgttgt tgcttcgccg cctgcaataa ctggtaatcg ataccgtatt
     3721 ctgcccgcag ccccagtttt tgtgcctgcg tcgcctgaag aaccatcgcg atttgccaca
     3781 gcggttgagt agaaaagagc gacggagaaa tgcccatctc ctggctaatg tgctgcagat
     3841 tttggagttg ctcctcgtta atgcgctctt ccagcgcctc gcaagtaggc aaattagcaa
     3901 aaggcgtatc gctggtggaa acatccgcct cgacgatcag cgcatcggcg tttttgagct
     3961 ttttgagcaa acgggtgggc aggggagtca tatcgtggct acccatatga atactgccaa
     4021 tcagatgaaa atggcgattg ccgggaaggg tgatatcgat ggcaggccag gtgtaatgat
     4081 taccgcgcag cgcggcccaa agcgttttta cccggtacaa cagatccata cgacctccct
     4141 ttgtgaaata tcatgctagc gcgcggtgag ggatggcgca aatggagttg gggacttgtt
     4201 taatgtgttt gtatgattca gtatgttctt gcatcgctat tcacagggaa gcaacagtta
     4261 aaaaccatga aacaggcaac aagaaaaccg acgacacccg gagatattct tctctatgaa
     4321 tatctggaac cgctcgattt gaaaatcaat gagttagcag agttgctgca tgttcatcgt
     4381 aatagcgtca gtacactgat caataataat cgtaaactca ccactgagat ggcattccgt
     4441 ctggcgaaag tttttgatac catagtcgat ttttggctaa acctccaggc ggcagttgat
     4501 ctttgggaag ttgaaaacaa catgcgcacc caggaagaat tgggacggat tgaaacagtg
     4561 gctgaatatt tggcacgccg tgaagagcgt gcaaaaaagg tcgcgtaagg ccaaaacatc
     4621 gcttcatctc gtaggccgga taaggcgttc acgccgcatc cggcatccga gcaccattgc
     4681 ctgatgcgac gcttacccgt cttatcaggc ctacaaacct gtgcctgaac cgtaggccgg
     4741 ataaggcgtt tacgccgcat ccggcagtca tgcgtcgatg ccaaatgcgc cgccctaaag
     4801 cagcgcatcc gcaatgacgt acttattcct tcggtttaaa ccgcagcaac cggttggcgt
     4861 tactcactac ggtaatcgac gagagcgcca ttgccgctcc ggcaactacc gggttaagca
     4921 gtgttccagt aaacggccac aaaataccag cggcgaccgg aataccaatg ctgttgtaga
     4981 taaacgcacc gagcaggttc tgcttcatat tgcgcagcgt tgcgcgggaa atcgcgagcg
     5041 catctgcaac acccatcagg ctatggcgca tcagggtaat cgccgcggtt tcaatggcaa
     5101 catcactgcc gccacccatc gcaataccga catccgcctg agccagcgct ggcgcgtcgt
     5161 taatgccgtc gcccaccatt gccacctgac gtccttcact ttgcagacgt ttgatcgctt
     5221 cggctttacc gtctggcagc accccggcga ttacctcatc aatccctgct tctttggcga
     5281 tcgcattggc ggtggttggg ttatccccgg tcaacatcac cagacgatat cccgctttat
     5341 gcaggcgttg cagcgccgcc acgctatcac tacgcaacgg atcgcgtaca gccagcaggg
     5401 ctactacttt cccgtcaatc gccagcagca caggcgttgc tccttgcgat gcctgagctg
     5461 aaatatcggc ttcaatcgct ttagtatcga cttgctggtc atttaacagc gccggattac
     5521 ccagcaataa cgcatgacct tcagcttcac cgcttacgcc cagcccgcgc aatgtgcgga
     5581 aaccgttgac ctgcggcagc tgcatatcgc ctgctttatc gaggatcgct cgtgccagcg
     5641 gatggctgga accttgctcc agcgccgccg ccagacgcaa tgcttgcgct tcatcaacat
     5701 cagcaaatgt ttttactgcg acaacctgcg gcttcccttc ggtcagcgtc ccggttttat
     5761 cgaacacgac ggtatcgagt gtactggcgc gttgcagcgc gtcggcgtcc cgcaccagca
     5821 cgccaaactc agccgcccgc ccgacgccgg aaataatcga cattggcgtc gccagcccca
     5881 gcgcacacgg acaggcaata atcagcaccg tggtggctat caccagggta tagacaatct
     5941 gcggtgccgg accaaagaaa taccagattg ctgcactgat cagcgcaatc accactacta
     6001 ccggcacaaa tacggctgag attttatccg ccagctgacc gatttctggc ttgctgctct
     6061 gggcctggcg caccatgcga ataatccttg acagcgtggt atggctgcca accgcactgg
     6121 cgcgaaatag cacgctaccg tcctgtacca ctgtcccggc atggacgctt tcgccttcgc
     6181 ctttttgctg cgggattggt tcgcccgtca gcatcgcttc atccagccat gcttcgccct
     6241 gggtaatctc gccatctacc ggcacgcgat cgccggtcgt caggcgcagt aacatccctg
     6301 gctgaacttc cgccagcggc acgctttttt caccctctgc ggtgaccact cgcgccgtcg
     6361 gtggggttaa atcgagtaat ttctccagcg ccttagaaga acgctgacgc gcgcgcgctt
     6421 ccagcatatg gccgagatta atcagaccga taatcatcgc actggcttca tagtaaagat
     6481 gccgcgcttc catcgggaac cactgcggcc acaggttgac gctcatcgaa tagagccacg
     6541 ccacacccgt acccagcgcc accagcgtat ccatcgtcgc cgcaccgttc agcaggcttt
     6601 tccacgcgct gcggtaaaaa tgcccgccgg cgaaaaccat taccgccagg gttatcaggc
     6661 cgataactaa ccacaggctg cggttgtcag cggtgaccat catgttatcg ccgatcatcc
     6721 cccagaccat taccggaata cccaccgcca gtgcgacaat cgcctgccag cggaagcgct
     6781 tcatcgtagc gacggcggtt tcctgctggc gctcgcggcg tttcgcgtca tcttcaatcg
     6841 cttccgcgcc gtagcccgct ttttccaccg cctgcactaa atcttgtggg gaggcactgc
     6901 ccatcaccag cgcagtacgc tccgccaggt ttacccgtgc ctgagtgacg cccggtacgc
     6961 tttgcagcgc attttgtacg cgggtgacac agctggcgca gctcatgccg ctcagcagca
     7021 actgctggct gtcatcgtca tcggcggtcg ctgccggaag cgcctcagaa accgctgtca
     7081 gtgcttccga cgggattgat gactccgcca gcggtttagc ctttgggtgg cttacagatg
     7141 cgtcataacc cgcttgtttg atggtttcga tcagctgttc tgcactggca gtcccggtaa
     7201 cgtgcgcttc agtgatagac acatccgctt gttccacatc cgggcgctgt tcgagacttt
     7261 ctttcacgcg tttaacgcag tgaccgcagg acaggccgtc cagggtcagg tcgatagttt
     7321 gtgacataaa acactccttt aagacagttt tgactggctg tgataaaggt taaaccttcc
     7381 agcaagggga aggtcaagaa attaataaac caggcgggta aaagtccgta aagattaaaa
     7441 aatcggctcg atttgcatca ggattagaca tttatttctt tgttttcctg tagttaagtt
     7501 gctggtgcta agttaaatca ggatgcctga aaatcggcac cggggtgagg aattacctcc
     7561 cgcatctata aaaaggagtt aacaaaagat gttagatgca aacaaattac agcaggcagt
     7621 ggatcaggct tacacccaat ttcactcact taacggcgga caaaatgccg attacattcc
     7681 ctttctggcg aatgtaccag gtcaactggc ggtagtggct atcgtgacct gcgatggcaa
     7741 cgtctatagt gcgggtgaca gtgattaccg ctttgcactg gaatccatct cgaaagtctg
     7801 tacgttagcc cttgcgttag aagatgtcgg cccgcaggcg gtacaggaca aaattggcgc
     7861 tgacccgacc ggattgccct ttaactcagt tatcgcctta gagttgcatg gcggcaaacc
     7921 gctttcgcca ctggtaaatg ctggcgctat tgccaccacc agcctgatta acgctgaaaa
     7981 tattgaacaa cgctggcagc gaattttaca tatccaacag caactggctg gtgagcaggt
     8041 agcgctctct gacgaagtca accagtcgga acaaacaacc aacttccata accgggccat
     8101 agcctggctg ctgtactccg ccggatatct ctattgtgat gcaatggaag cctgtgacgt
     8161 gtacacccgt cagtgctcca cgctcatcaa tactgttgaa ctggcaacgc ttggcgcgac
     8221 gctggcggcg ggtggtctga atccgctgac gcataaacgc gttcttcagg ccgacaacgt
     8281 gccgtacatt ctggccgaaa tgatgatgga agggctgtat ggtcgctccg gtgactgggc
     8341 gtatcgcgtt ggtttaccgg gcaaaagcgg tgtaggtggc ggtattctgg cggtcgtccc
     8401 tggcgtgatg ggaattgccg cgttctcacc accgctggac gaagaaggta acagtgttcg
     8461 cggtcaaaaa atggtggcat cggtcgctaa gcaactcggc tataacgtgt ttaagggctg
     8521 atcatgatga acacggaagg taataacggt aacaaacccc tcggtctatg gaatgtcgtt
     8581 tccatcggta ttggggcaat ggtgggggcg gggatcttcg cgctgctggg gcaggctgcg
     8641 ttgctaatgg aagcctcgac ctgggtcgcc tttgcttttg gcggtattgt ggcgatgttt
     8701 tccggttatg cctatgcgcg tctgggggcg agctatccca gcaatggcgg cattatcgac
     8761 ttctttcgtc gcggattagg caacggcgtc ttttcgctgg cgctctcgtt actgtacctg
     8821 ttgacgctgg cggtgagcat cgccatggtc gcccatgctt ttggcgctta tgccgtgcag
     8881 tttttgcatg aaggcagcca ggaggagcac cttattttgc tctacgcgtt ggggagcatt
     8941 gcggtgatga cgcttttcaa ctccttaagc aaccatgcgg tagggcggct ggaagtgatc
     9001 ctcgtcggca ttaaaatgat gatcctgtta ttgctgatta ttgccggtgt ctggtcgctg
     9061 caaccagcgc atatttccgt ctctgcgccc cccagctccg gtgcgttctt ctcctgtatt
     9121 gggataactt tccttgccta tgcgggcttt ggcatgatgg cgaacgcggc ggataaagtg
     9181 aaagatccgc aggtcattat gccacgggcg tttctggtgg cgattggcgt taccacgttg
     9241 ctttatatct cgctggcact ggttttgctt agcgatgtat cggcattaga gttagaaaaa
     9301 tatgccgata ccgccgtagc gcaggctgct tctccgctgc tcggacatgt gggttatgtg
     9361 atcgtcgtca tcggcgcttt actggcgacg gcttcagcca ttaacgcgaa cctgttcgcc
     9421 gtgtttaaca tcatggacaa catgggcagc gaacgcgaac tgccgaagct aatgaataaa
     9481 tccctgtggc ggcagagtac ctggggcaac atcattgtcg tggtgttgat tatgctgatg
     9541 acggcggcac tgaatttagg ctcactcgcc agcgttgcca gcgccacctt tttgatttgc
     9601 tacctggcgg tgtttgtggt ggcgatccgc ctgcgtcatg atattcacgc ctcgttgccg
     9661 attcttatcg ttggtacgtt ggtgatgttg ttggtgatcg ttggctttat ctacagtctg
     9721 tggtcccagg gtagccgtgc gttgatatgg attattggct cactcttact cagccttatt
     9781 gtggcaatgg tcatgaagcg caataaaacc gtataacatc tctctgtgcg cagtacttcc
     9841 tgtattattg tggtggcggt cgatattcgc actggcaaaa aaacgtgctt gaatatctgt
     9901 tgaaaccctt taacaaagca caggaggcgt tgcgcgaacg atgaacatca gcgatgtagc
     9961 aaaaattacc ggcctgacta gcaaagccat tcgcttctat gaagagaagg ggctggtgac
    10021 gccgccgatg cgcagcgaaa acggttatcg cacctacacg cagcagcatc tcaacgaact
    10081 gaccttactg cgccaggcac ggcaggtggg ctttaacctg gaagagagcg gcgagctggt
    10141 gaatctgttt aacgacccgc agcggcacag cgccgacgtc aaacggcgca cgctggagaa
    10201 ggtggcggag atcgaacgac acattgagga gctgcaatcc atgcgcgacc agctgctggc
    10261 actggcgaat gcctgccctg gcgatgacag cgccgactgc ccgattatcg aaaatctctc
    10321 cggctgctgt catcatcggg cagggtgatt aagacgagac ggctcggata tgtagggtta
    10381 tcccttctat cgcaatgact tcaacatgcg tacctgcacc gagatcctcg ctggcgctga
    10441 caggccatga actgtcaccg acgcgcatat gaccgcgccc gttgaccagc ggagattcca
    10501 gcacaaaacg tcggccaatc agctgctgcc cgcgctggtt taaatgacta tcgctgtgct
    10561 tttgttcgcg cacccgccgc gacaaccatt tccaccacag ccaggcggcg agcagcgtca
    10621 ggatggcaaa cattacccct tgccactccc aacccagcgg caccagccag accaccaggc
    10681 cggtaatcac cgctgccacg ccgctccaca acaaataacc atttccgccc agcatctcgg
    10741 ctgccagcag caaaccgccg agactgagcc agaaaatatg tggatgaacg accattaact
    10801 ccatcatggc tgagtccgtt tgttggcgct gtctttcacc agttcggcaa tcccggcaat
    10861 cgaccccatc aggctgctgg cctctaatgg catcatcact actttgctgt tactggagga
    10921 accgatctgc tgtaacgctt cggtgtattt ctgcgctacg aagtagttca ccgcctgaat
    10981 atcaccggag gcgatagctt cagacaccat tttggtggcg cgggcttctg cttcggcgga
    11041 acgttcacgc gcttcagcct gtaaaaacgc cgactgacgt tcgccttccg ctttcaggat
    11101 ttgcgactgt ttttcacctt cggctttgag gatttccgcc tgacggatcc cttccgcttc
    11161 aagaatgtaa gcgcgtttgg tacgttccgc tttcatctgc gcgttcattg aagagataag
    11221 ctctgccggt gggcgcacgt cgcgaatttc aatacgggtg actttaatcc cccacgggtt
    11281 ggtggcttca tcgacaatac gcagcaggcg tgagttgatg ctgtcgcgct gagagagcat
    11341 ttcgtcaagt tccattgaac ccaacacggt acggatgtta gtcatggtca ggttgatgat
    11401 cgccagctcc agattgctga cttcataggc agcgcgtggc gcgtcaatca cctgaataaa
    11461 acagactgcg tcgatggtaa cgttggcgtt atctttcgag ataacttcct gggaagggat
    11521 atcgagcact tgctccatca tattgatctt gcgaccaatg cgatccataa acggcaccac
    11581 cagactgagc cccggctgta acgttttggt atagcgacca aaacgttcta ccgtccattg
    11641 atagccctgc ggcacgattt tgacgcccgc gccgacaatg accagcgcga caaaaatgag
    11701 aatcgggata aagataagca tcggaaaaac ctcctgttgt accgtccata atcagcaaaa
    11761 ttgctgcttg attaaacaaa ttatacctga ttactgaaag agagttcccc cttattcctg
    11821 cgaaggataa actgttttta gtaaaaatca gaaaaaggga acagcgatgc aggaaaatag
    11881 tcctttgctt cagctacaaa acgtaggata tctggcgggt gatgcgaaga ttcttaataa
    11941 catcaatttt tcgctgcgtg ctggcgaatt taagttaatt accggtcctt ctggttgtgg
    12001 caaaagtacg ctgctaaaaa tagttgcttc attgatcagc ccaaccagcg gaacgttact
    12061 gtttgaaggt gaggatgtca gcacactaaa gccagaaatc taccgccaac aagtctctta
    12121 ctgcgcccag acaccgacgc tgtttggcga tacggtatac gataatctga tctttccctg
    12181 gcagatccgt aaccggcagc ctgacccagc catttttctc gattttctcg aacgcttcgc
    12241 cttgccggac agcattttga cgaaaaatat cgccgagcta tctggtggtg aaaaacaacg
    12301 catctcactg attcgtaacc tgcaatttat gccgaaggtt ttattgctgg atgaaatcac
    12361 cagtgcgctg gatgaaagta ataaacataa cgttaatgag atgatccatc gttatgtgcg
    12421 cgagcaaaat attgccgtgc tgtgggtgac acacgataaa gacgaaatta atcatgcgga
    12481 taaagtgatt acactgcaac cgcatgccgg agaaatgcag gaagcacgct atgaactcgc
    12541 ataatattac taacgaatca ttggcactgg cattaatgct ggtggtggtg gcaatcttaa
    12601 ttagccataa agaaaaactg gcgctggaga aagatatttt ctggagcgtc gggcgcgcga
    12661 taattcagct gattattgtc ggctatgtgc tgaagtatat tttcagcgtg gatgatgcca
    12721 gcctgacatt attgatggtg ttatttatct gctttaatgc ggcgtggaac gcgcaaaaac
    12781 gcagtaaata tattgctaaa gcttttatct catcgtttat tgccattacg gttggggcgg
    12841 gaattaccct ggcggtgctg attctctcag ggtcgattga atttatcccg atgcaggtga
    12901 tccctatcgc cgggatgatt gccggtaacg ccatggtagc ggtggggttg tgttacaaca
    12961 atttagggca acgggtcatt agcgaacagc aacagattca ggagaaactg agtcttggcg
    13021 cgacgccgaa gcaggcttca gcgatattga ttcgcgacag tattcgcgcg gctttaattc
    13081 cgacggtcga ttcagcaaaa acggttggct tagtgagttt accaggaatg atgtccgggc
    13141 tgatatttgc cgggattgat ccggtgaagg cgattaaata tcagattatg gtgaccttta
    13201 tgctgctctc aaccgccagc ttgtcgacca ttattgcctg ctatttaacc tatcgtaagt
    13261 tttataattc gcgccaccag ttggtggtga cgcaattgaa gaagaaatga tgcgatgccg
    13321 gatgcgcagc atcgcatccg gcgttgtggt tcatgtgccg aacaacggaa tatcaataca
    13381 acaatgcata cagctggcgg cgatacttcg acgccagtgc atcacccgta cccagcgcag
    13441 cgaggatctc ctggaacgtt ttacgcgtct gaccgtctgc ggcggtgaga tctttacgca
    13501 gatgcccgaa cagcaactcc agcgcctctt cattgcgccc aacctgatgc agttgcagcg
    13561 ccagttgcgt cgccagtgcg gcatcttctg gattctccgc cacctgctgt tgcaactgtt
    13621 gaatttccgg cgtatcagcc gcctgcttca gcagttcgat ttgcgccacc agcccctggt
    13681 agcgggtgtc ctgatcctgc aacggaatgg ttttcagcac cgcttccgca tcttcagaac
    13741 ggttcagcgc aatcagcgtt tctgccagca gcaggccgat ctccccgttc tgattcgaca
    13801 actgccaggc gtctttcagc aatggcaggg catcggtgta attgccttcc tgcatcagtt
    13861 gcatcgcctg ctgcgctttc agctcttctt cgcgcggcag cactttatcc agcagggcgc
    13921 ggatcgcctc ttccggttgc ggcccctgga agccatctac cggttgcccg ttctggaaca
    13981 gatacacggt cggaatcgcg cgcagaccaa actgggcggc aatcatctgc tccgcgtcgc
    14041 agtccagctt cgccagaata aattgcccgt tgtactgcgc cgcgaggctt tccaggatcg
    14101 gggttaactg caaacagtgc tggctacgtt cagaccaaaa atagaacagc accggagtgg
    14161 tcatcgactg ttcaagaacc tgttgcaggt tagattcgtt aatgttgaca atattttcta
    14221 cggacatgga gtcgctctct gttgtcgata ttttctttga catgggggct taagcgcgcg
    14281 cttcaactca cccctgcaat attttgtcca tcacgcgccc aggcagcagg cgcttgagca
    14341 ccattactgc ccaggtcacc agcgttaccg gatagcgcat cttcggcttc tcgctaataa
    14401 aagcatggcg cactttgtcg accaccgctt ccggtcccaa cgtaaagcgg gcggcgatgc
    14461 cgggattttc gactggttta tcactttgcg tctggttgac gttgtcggtg aagcgagtac
    14521 gaatgggacc gggttcgatc aggctgactt taattccgct gtggcgtagc tccatgcgca
    14581 gcgcgtctga ccacgcctcc agcgcatatt tactggccgc gtaagcgcca cgacccggcg
    14641 tggagattaa tcccatcacc gatgatgtca tcacaatacg cccttcaccg tgcggtaaca
    14701 tcgcgggtaa caggcgcatg gtgagctggt gtgcgccgaa aaagttggcg gaaaactgct
    14761 gttccatctg cgcacggctg atggtggaaa gggggccata catgccgaat ccggcattgt
    14821 taaagatccc atacagacaa ttatcggtca gggcgatcac ctcgtctgct gcgcgatcaa
    14881 cactttctgg tgaatccaga tcgatcaaca cgccggtaaa tcccatgttg ttcatacgct
    14941 caacatcatc cggttttcgg caacctgcca gcacatgaaa accctggcgt tttaattcga
    15001 gcgcgctttc caggccaatt ccactggaac atccggtaat taagaccgat ttttgcataa
    15061 ctttacctgt caggatctcc gttgctttat gagtcatgat ttactaaagg ctgcaactgc
    15121 ttcgccatcc agtcggcaat aaacggctgg gcgtcgcggt tgggatgaat accgtcatcc
    15181 tgcatccatt gtggcttgag gtagacctct tccataaaaa agggcagcag cggaacatca
    15241 aactctttgg cgagtttggg gtaaatggcg ctaaaggctt cattataacg gcgaccatag
    15301 tttgcaggca gacgtatttg cattaacaat ggttcagcgt tggcggcttt gacatcctgc
    15361 aaaatctggc gcagcgtttg ctcggtttgc tgtggctgaa aaccacgcaa accgtcattg
    15421 ccgcccagtt caaccagcac ccagcgcggc tgatgctgtt tcagcagagc cggaaggcgc
    15481 gccagtcctt gttgcgaggt gtcgccgctg atgctggcat taactaccga cgttttactc
    15541 tgccacttat cattcaacaa ggcaggccag gccgcgctgg cagacattcg atacccggcg
    15601 ctcaggctat cacccagaat caataacgtg tccgctgcgg cggcacggaa ggttaacagg
    15661 accaggaaca ggaagggcaa atgccagcgg aaaacattgt tgaagttcat catcttaaga
    15721 agtccgtcgg tcagggggag catgaactct ccatcctcac cggagttgag ctggttgtca
    15781 aacgtggcga gaccatcgca ctggtgggcg agtcgggatc gggtaagtca accttgctgg
    15841 cgatcctcgc cgggcttgat gacggcagca gtggcgaagt gagtctggtg ggacaaccgc
    15901 tacataatat ggacgaagaa gcgcgggcaa agttgcgcgc gaagcacgtc ggctttgttt
    15961 ttcagtcatt tatgttaatt cctaccctta acgcgctgga aaacgtcgag cttccggctc
    16021 tgctgcgcgg tgagagtagc gcggaaagtc gtaacggggc gaaagcgttg ctcgaacagt
    16081 tagggctggg taaacgtctg gatcatcttc cggcacagct ttccggcggt gaacagcaac
    16141 gagtggcgct ggcacgagcc tttaatggtc gacctgatgt gctgtttgcc gacgaaccca
    16201 ccggcaacct tgaccgccag acgggcgata aaattgccga cctgctgttt tccctcaacc
    16261 gtgaacatgg caccacgttg attatggtga cccacgacct gcaactggcg gcacgctgcg
    16321 accgctgctt acggctggtg aacgggcagt tgcaggagga agcatgattg cacgttggtt
    16381 ctggcgcgaa tggcgttcgc cgtcgctatt aattgtctgg ctggcgctaa gcctggcggt
    16441 ggcctgcgtg ctggcgctgg gcaatatcag cgatcgcatg gagaagggct taagccagca
    16501 aagccgtgag tttatggcgg gcgatcgggc gttgcgcagt tcacgcgaag tgccgcaagc
    16561 gtggctggag gaagcgcaaa agcgcggcct gaaagtcggc aagcagctga ctttcgccac
    16621 aatgaccttt gcaggcgaca caccgcagct ggcgaacgtc aaagcggtgg atgatatcta
    16681 cccgatgtat ggcgatctgc aaactaatcc ccctggcctg aaaccgcagg cgggcagcgt
    16741 attgctggcc ccacgcctga tggcactgct taacctgaaa acgggcgaca ccattgacgt
    16801 gggcgatgcc accttgcgga ttgccggaga agtgattcag gaaccggatt ccggttttaa
    16861 ccccttccag atggctccgc gtctgatgat gaatctggcg gatgtcgata aaaccggagc
    16921 cgtgcagccg gggagtcggg tcacctggcg ttataaattc ggcggcaacg agaaccagct
    16981 cgacggctat gagaaatggt tgttacctca gcttaaaccc gaacaacgct ggtacggtct
    17041 ggaacaggac gaaggcgcgc tggggcgatc gatggaacgc tcgcaacagt tcctgctgct
    17101 ttcggcgctt ctgaccttgc tgctggcagt ggcagcggtg gcggtagcga tgaatcatta
    17161 ctgtcgcagt cgctacgatc tggtggcgat cctcaaaacg ctgggggcag ggcgagcgca
    17221 actgcgtaag ctaatcgtcg gtcagtggtt gatggtgctg acgctttcag ccgttaccgg
    17281 tggggccata ggcctgttgt tcgaaaacgt gttgatggtg ctgctcaagc ccgttctgcc
    17341 tgctgcacta ccgccagcca gcctctggcc gtggctgtgg gcgcttggca ccatgacggt
    17401 catctcgctg ctggtggggc tacgaccata ccgcttgttg ctggcaacgc agcctttacg
    17461 cgtattacgt aatgatgtgg tagcgaacgt ctggccgctg aagttttatc tgccgattgt
    17521 cagtatggtg gttgtgctgc tgctcgccgg attaatgggt ggcagcatgc tgctttgggc
    17581 ggtgctggcg ggcgcggtag tactggcttt gctgtgcggt gtgctgggct ggatgcagct
    17641 gaatgtactt tgccgcatga cgctgaaatc gctacctctg cgcctggcgg ttagccgcct
    17701 gttacgtcag ccgtggtcaa cgttaagcca gctttcggca ttttcgctct cctttatgct
    17761 gctggcgctg ttgctggtat tgcgttgcga tctgctcgac cgctggcagc agctaccgcc
    17821 agaaagcccg aactactttt taattaacat cgccacagaa caggtagcac cgctaaaagc
    17881 gttcctcgcg gaacatcata tagtcccgga atcattttat ccggtagtgc gggcgcggct
    17941 gacggcgatt aacgataagc cgacagaagg taatgaagat gaggcgctta atcgcgaact
    18001 caatcttacc tggcaaaata cgcggcccga tcataatccg attgtcgccg gtaactggcc
    18061 gccaaaagcc gatgaagtgt cgatggaaga ggggctggcg aaacgcttaa acgttgccct
    18121 cggtggtacc gtgactttta tgggcgatac ccaggagttc cgcgctaaag tgaccagcct
    18181 gcgcaaagtg gactgggaaa gtctgcggcc taatttctat tttattttcc cggaaggggc
    18241 attagacggg caaccgcaga gctggcttac cagtttccgc tgggagaatg gcaacggcat
    18301 gttgacgcaa ctcaaccgcc agttcccgac cattagcctg ttagatattg gcgcgatttt
    18361 aaaacaggtc ggttaggtgc tggagcaggt aagtcgggcg ctggaggtga tggtggtgct
    18421 ggtcaccgcc tgcggtatgt tgctgttgct ggcacaggtg caggtgggaa tgcgccagcg
    18481 tcatcaggag ctggtggtat ggcgcacact cggtgcgggg aaaaaactgc tgcgcacgac
    18541 attgtggtgt gagttcgcca tgcttgggtt tgtttccggc ctggtggccg caattggtgc
    18601 ggaaacggca ctggcagtgt tgcaggcgaa agtgtttgat ttcccgtggg agccagactg
    18661 gcgattgtgg attgttctgc cgtgcagcgg tgcgctgctg ctgtcgcttt tcggcggctg
    18721 gctgggtgcg cgactggtta agggtaaggc gctgttcagg cagtttgcgg ggtgatgaga
    18781 gtaaataagg ggcgttctgg ttgaatggaa cgccttgttt aaattaattc tacaatatgt
    18841 ttcattgatg atgttattga attggtgatt tcctatcttt ctattgctga tattaatctg
    18901 aattggtgga gtttaataat tttaaatata gccctacaaa aataactcag actaataaaa
    18961 tcataaatca tatgcgttga atggatatta tccatatagt gaatttgttg atgatgaatt
    19021 catctgtgct aaaaatttta gtttaataaa atattgaaag tgacctgtaa taacagttat
    19081 tgttgattga gaacaaataa gtttatgtga aaaatatata aatacattag ctggtcatgt
    19141 gtgtcatttt atttttttgt tgctaacaca gggatatgaa caataactaa aagggcactt
    19201 tatatgagcg gaaaaccagc ggcgcgtcag ggagatatga ctcagtatgg cggtcccatt
    19261 gtccaggggt cggcaggtgt aagaattggc gcgccaactg gcgtggcgtg ctcggtgtgt
    19321 ccgggcggga tgacctcggg caacccggtg aacccgctgc tcggtgcaaa agtacagccc
    19381 ggcgagacgg accttgcgct gcccgacccg ctgccgttca ttctctcccg cacctacagc
    19441 agctaccgga cgaagacgcc tgcgccagtg ggaacttttt ggccccggct ggaaagcgcc
    19501 ttctgatatc cgcttacaga tacgcgatga tgcactggta ctcaacgaca acggcgggcg
    19561 gagcattcac tttgagccgc tgctgccggg gaaggctgtg tacagccgca gtgagtcaat
    19621 gtggctggtg cgtggcggta aggcagcgca gccggacggc cacacgctgg cacgactgtg
    19681 ggcgtcgctg ccgccggata tccggttaag cccgcatctt tacctggcga ccaacagcgc
    19741 acaggggccg tggtggatac tggggtgatc tgagcgggtg ccgggtgctg aggacgtact
    19801 gccagcgccg ctgccgccgt accgggtgct taccgggatg gcggaccgct tcgggcggac
    19861 gctgacgtac cggcgtgagg ccgcaggcga cctggccggg gaaatcaccg gcgtgacgga
    19921 cggtgccggg cgggagttcc gtctggtgct gaccacacag gcgcagcagg cggaagaggc
    19981 ccggcagcag gcggtcgtcg ccggagcaaa acgaccggac attcctgatt cactgccgga
    20041 gagcacagag tacggccccg acaggggtat ccgcctttcg gcggtgtggc tgatgcacga
    20101 cccggcatac ccggagagcc tgcccggtgc gccactggcg cggtacacgt atacggaagc
    20161 cggtgaactg ctggcggtat atgaccgcag caatacgcag gtgcgcgctt tcacgtatga
    20221 cgcgcagcac ccgggccgga tggtggcgca ccgttacgcg ggaaggccgg agatgcgcta
    20281 ccgctacgac gatacggggc gggtggtgga gcaactgaac ccggcagggt taagctaccg
    20341 ctatctttat gagcaggacc gcatcaccgt caccgacagc ctgaaccggc gtgaggtgct
    20401 gcatacagaa ggcggggccg ggctgaaacg ggtggtgaaa aaagaactgg cggacggcag
    20461 cgtcacgcgc agcgggtatg acgcggcagg aaggctcacg gcgcagacgg acgcggcggg
    20521 acggcggaca gagtacggtc tgaatgtggt gtccggcgat atcacggaca tcaccacacc
    20581 ggacgggcgg gagacgaaat tttactataa cgacgggaac cagctgacgg cggtggtgta
    20641 cccggacggg ctggagagca gccgggaata tgatgaaccg ggcaggctgg tatcggagac
    20701 atcgcgcagc ggggagacag tacgctaccg ctacgatgac gcgcacagtg agttaccggc
    20761 gacgacaacg gatgcgacgg gcagcacccg gcagatgacg gcggttcacc gcgaggaagg
    20821 tatcagcctt taccgccact atgacaaccg tggccggtta acctcggtga aagacgcaca
    20881 gggccgtgaa acgcagtatg agtacaacgc cgcaggcgac ctgactgccg ttatcacccc
    20941 ggacggcaac cggagcgaga cacagtacga tgcgtgggga aaggcggtca gcaccacgca
    21001 gggcgggctg acgcgcagta tggagtacga tgctgccgga cgtgtcatca gtctgactaa
    21061 cgagaacggc agtcacagcg acttcagcta cgatgcgctg gaccggctgg tacagcaggg
    21121 cggctttgac gggcggacgc aacgttatca ttatgacctg accggaaaac tcacgcagag
    21181 tgaggatgag gggcttgtca ccctctggca ctacgatgcg tcggaccgca tcacgcaccg
    21241 gacggtgaac ggcgacccgg cagagcagtg gcagtatgac ggccacggct ggctgagaga
    21301 aatcagccac ctgagcgaag gccaccgtgt cgctgtccac tacggctacg acgataaggg
    21361 ccgcctgacg ggcgaacggc agacggtgga gaacccggag acgggggaac tgctgtggca
    21421 gcatgagacg aaacacgcct acaacgaaca ggggctggca aaccgcgtca cgccggacag
    21481 cctgccgccg gtggagtggc tgacctacgg cagcggttac ctggcgggca tgaagctggg
    21541 cgggacgccg ctggtcgagt atacgcggga caggctgcac cgtgagacgg tgcgcagctt
    21601 cggcagcatg gcaggcagta atgccgcata tgaactgacc agcacataca cccccgcagg
    21661 ccagttacag agccagcacc tgaacagcct ggtgtatgac cgtgactacg ggtggaatga
    21721 caacggcgac ctggtgcgca tcagcggtcc gcgacagacg cgggaatacg gctacagcgc
    21781 cacgggcagg ctggagagcg tgcgcaccct cgcaccggac ctggacatcc gcatcccgta
    21841 tgcgaccgac ccggcgggaa accggctgcc ggacccggag ctacacccgg acagcacgct
    21901 cacggcgtgg ccggataacc gcatcgcaga ggatgcgcac tatgtttacc actatgatga
    21961 atacggcaga ctgacggaga agacggaccg catcccggcg ggtgtgatac ggacggacga
    22021 cgagcggacc caccactacc actacgacag ccagcaccgc ctggtgttcc acacgcggat
    22081 acagcatggc gagccactgg tcgagagccg ctacctctac gacccgctga gccgccggac
    22141 ggggaaacgg gtgtggcgtc gcgagcgtga cctgacgggg tggatgtcgc tgtcgcgtaa
    22201 accggaggtg acgtggtacg gatgggacgg cgaccggctg acgacggtac agaccgacac
    22261 cacgcgtatc cagacggtat accagccggg gagcttcgcg ccgctcatcc gcatcgaaac
    22321 agacaacggt gaacgggaga aagcgcagtg ccgcagcctg gcggagaagt tacagcagga
    22381 agggagcgaa gacggtcacg gtgtggtgtt cccggctgaa ctggtggggc tgctggacag
    22441 gctggagggg gaaatccggg caaactgcgt gagcagtgaa agccgccagt ggcttgcgca
    22501 gtgcgggctg acggtggagc ggctggcggc acagatagag ccggtttatt tgcctgagcg
    22561 aaaaatacat ctttatcact gtgaccaccg gggcctgccg ctggcgctta tcagtgaaga
    22621 cggcaatacg gcgtggagcg cggaatatga tgaatggggc aaccagctta atgaggagaa
    22681 cccgcatcac ctgcaccagc cgtaccggct gccggggcag cagtatgata aggagtcggg
    22741 gctgtactac aaccggaacc ggtactacga tccgttgcag gggcggtata tcactcagga
    22801 cccgataggg ctggaggggg gatggagtct gtatgcgtat ccgctgaatc cggtgaatgg
    22861 tattgatcca ttagggttaa gtcccgcaga tgtagcgcta ataagaagaa aagatcaact
    22921 aaaccatcaa a
//
LOCUS       DADMJE010000054        22864 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.055, whole genome shotgun sequence.
ACCESSION   DADMJE010000054 DADMJE010000000
VERSION     DADMJE010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22864
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.055"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            39..968
                     /gene="aaeR"
                     /locus_tag="JN001_001899"
     CDS             39..968
                     /gene="aaeR"
                     /locus_tag="JN001_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator AaeR"
                     /protein_id="HAY9053150.1"
                     /translation="MERLKRMSVFAKVVEFGSFTAAARQLQMSVSSISQTVSKLEDEL
                     QVKLLNRSTRSIGLTEAGRIYYQGCRRMLHEVQDVHEQLYAFNNTPIGTLRIGCSSTM
                     AQNVLAGLTAKMLKEYPGLSVNLVTGIPAPDLIADGLDVVIRVGALQDSSLFSRRLGA
                     MPMVVCAAKSYLTQYGIPEKPADLSSHSWLEYSVRPDNEFELIAPEGISTRLIPQGRF
                     VTNDPMTLVRWLTAGAGIAYVPLMWVINEINRGELEILLPRYQSDPRPVYALYTEKDK
                     LPLKVQVVINSLTDYFVEVGKLFQEMHGRGKEK"
     gene            complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="JN001_001900"
     CDS             complement(1096..2541)
                     /gene="tldD"
                     /locus_tag="JN001_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HAY9053151.1"
                     /translation="MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSY
                     HESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRD
                     SGDGKVQTLGAVGHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQKVTASLS
                     GVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLD
                     GEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRR
                     GTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQ
                     DKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFG
                     GGQVDITSGKFVFSTSEAYLIENGKVTKPVRGATLIGSGIETMQQISMVGNDLKLDNG
                     VGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA"
     gene            complement(2697..6497)
                     /locus_tag="JN001_001901"
     CDS             complement(2697..6497)
                     /locus_tag="JN001_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709041.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA2 domain-containing protein"
                     /protein_id="HAY9053152.1"
                     /translation="MRRLPGILLLTGAALVVIAALLVSGLRIALPHLDAWRPEILNKI
                     ESATGMPVEASQLSASWQNFGPTLEAHDIRAELKDGGEFSVKRVTLALDVWQSLLHMR
                     WQFRDLTFWQLRFRTNTPITSGGGNDSLEASHISDLFLRQFDHFDLRDSEVSFLTPSG
                     QRAELAIPQLTWLNDPRRHRAEGLVSLSSLTGQHGVMQVRMDLRDDEGLLSNGRVWLQ
                     ADDIDLKPWLGKWMQDNIALETAQFSLEGWMTIDKGDVTGGDVWLKQGGASWLGEKQT
                     HTLSVDNLTAHITRENPGWQFSIPDTRITMDGKPWPSGALTLAWIPEQDVGGKDNKRS
                     DELRIRASNLELAGLEGIRPLAAKLSPALGDVWRSTQPSGKINTLALDIPLQAADKTR
                     FQASWSDLAWKQWKLLPGAEHFSGTLSGSVENGLLTASMKQAKMPYETVFRAPLEIAD
                     GQATISWLNNDKGFHLDGRNIDVKAKAVHARGGFRYLQPANDEPWLGILAGISTDDGS
                     QAWRYFPENLMGKDLVDYLSGAIQGGEADNATLVYGGNPQLFPYKHNEGQFEVLVPLR
                     NAKFAFQPDWPALTNLDIELDFINDGLWMKTDDVNLGGVRASNLTAVIPDYSKEKLLI
                     DADIKGPGKAVGPYFDETPLKDSLGATLQELQLDGDVNARLHLDIPLNGELVTAKGEV
                     TLRNNSLFIKLLDSTLKNLSGKFSFINGDLQSEPLTASWFNQPLNVDFSTKEGAKAYQ
                     VAVNLNGNWQPAKTGVLPAAVNEALSGSVAWDGKVGIDLPYHAGATYNVELNGDLNNV
                     SSHLPSPLAKPAGEPLPVNVKVDGNLSSFELTGQAGADNHFNSRWLLGQKLTLDRAIW
                     AADSKTLPPLPEQSGVELNMPPMNGAEWLALFQKGAAESVGGAASFPQHITLRTPMLS
                     LGNQQWNNLSIVSQPTANGTLVEAQGREINATLAMRNNAPWLANIKYLYYNPSVAKTR
                     GDSTPSSPFPTTERINFRGWPDAQIRCTECWFWGQKFGRIDSDLTISGDTLTLTNGLI
                     DTGFSRLTADGEWVNNPGNERTSLKGKLRGQKIDAAAEFFGVTTPIRQSSFNVDYDLH
                     WRKAPWQPDEATLNGIIHTQLGKGEITEINTGHAGQLLRLLSVDALMRKLRFDFRDTF
                     GEGFYFDSIRSTAWIKDGVMHTDDTLVDGLEADIAMKGSVNLVRRDLNMEAVVAPEIS
                     ATVGVAAAFAVNPIVGAAVFAASKVLGPLWSKVSILRYHISGPLDDPQINEVLRQPRK
                     EKAQ"
     gene            complement(6565..8034)
                     /gene="rng"
                     /locus_tag="JN001_001902"
     CDS             complement(6565..8034)
                     /gene="rng"
                     /locus_tag="JN001_001902"
                     /EC_number="3.1.26.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease G"
                     /protein_id="HAY9053153.1"
                     /translation="MTAELLVNVTPSETRVAYIDGGILQEIHIEREARRGIVGNIYKG
                     RVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQD
                     LMVQVVKDPLGTKGARLTTDITLPSRYLVFMPGASHVGVSQRIESESERERLKKVVAE
                     YCDEQGGFIIRTAAEGVGEAELASDAAYLKRVWTKVMERKKRPQTRYQLYGELALAQR
                     VLRDFADAELDRIRVDSRLTYEALLEFTSEYIPEMTSKLEHYTGRQPIFDLFDVENEI
                     QRALERKVELKSGGYLIIDQTEAMTTVDINTGAFVGHRNLDDTIFNTNIEATQAIARQ
                     LRLRNLGGIIIIDFIDMNNEDHRRRVLHSLEQALSKDRVKTSVNGFSALGLVEMTRKR
                     TRESIEHVLCNECPTCHGRGTVKTVETVCYEIMREIVRVHHAYDSDRFLVYASPAVAE
                     ALKGEESHSLAEVEIFVGKQVKVQIEPLYNQEQFDVVMM"
     gene            complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="JN001_001903"
     CDS             complement(8024..8617)
                     /gene="yhdE"
                     /locus_tag="JN001_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphatase YhdE"
                     /protein_id="HAY9053154.1"
                     /translation="MTSLYLASGSPRRQELLAQLGVTFERIVTGIEEQRQPQESAQQY
                     VVRLAHKKAQAGVAQTAQDLPVLGADTIVILNGEVLEKPRDAEHAAQMLRKLSGQTHQ
                     VMTAVVLADSQHILDCLVVTDVTFRTLTDEDIAGYVASGEPLDKAGAYGIQGLGGCFV
                     RKINGSYHAVVGLPLVETYELLSNFNALREKRDKHDG"
     gene            complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="JN001_001904"
     CDS             complement(8626..9114)
                     /gene="mreD"
                     /locus_tag="JN001_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001487551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HAY9053155.1"
                     /translation="MASYRSQGRWVIWLSFLIALLLQIMPWPDNLIVFRPNWVLLILL
                     YWILALPHRVNVGTGFVMGAILDLISGSTLGVRVLAMSIIAYLVALKYQLFRNLALWQ
                     QALVVMLLSLVVDIIVFWAEFLVINVSFRPEVFWSSVVNGVLWPWIFLLMRKVRQQFA
                     VQ"
     gene            complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="JN001_001905"
     CDS             complement(9114..10199)
                     /gene="mreC"
                     /locus_tag="JN001_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HAY9053156.1"
                     /translation="MKPIFSRGPSLQIRLILAVLVALGIIIADSRLGTFSQIRTYMDT
                     AVSPFYFVSNAPRELLDGVSQTLASRDQLELENRALRQELLLKNSELLMLGQYKQENA
                     RLRELLGSPLRQDEQKMVTQVISTVNDPYSDQVVIDKGSVNGVYEGQPVISDKGVVGQ
                     VVAVAKLTSRVLLICDATHALPIQVLRNDIRVIAAGNGCTDDLQLEHLPANTDIRVGD
                     VLVTSGLGGRFPEGYPVAVVSSVKLDTQRAYTVIQARPTAGLQRLRYLLLLWGADRNG
                     ANPMTPEEVHRVANERLMQMMPQVLPSPDAMGPKLPEPTTGIAQPTPQQPTTGNAATA
                     PAANRSPQRATPPQSGAQPPARAPGGQ"
     gene            complement(10265..11308)
                     /locus_tag="JN001_001906"
     CDS             complement(10265..11308)
                     /locus_tag="JN001_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000913396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HAY9053157.1"
                     /translation="MLKKFRGMFSNDLSIDLGTANTLIYVKGQGIVLNEPSVVAIRQD
                     RAGSPKSVAAVGHDAKQMLGRTPGNIAAIRPMKDGVIADFFVTEKMLQHFIKQVHSNN
                     FMRPSPRVLVCVPVGATQVERRAIRESAQGAGAREVFLIEEPMAAAIGAGLPVSEATG
                     SMVVDIGGGTTEVAVISLNGVVYSSSVRIGGDRFDEAIINYVRRNYGSLIGEATAERI
                     KHEIGSAYPGDEVREIEVRGRNLAEGVPRGFTLNSNEILEALQEPLTGIVSAVMVALE
                     QCPPELASDISERGMVLTGGGALLRNLDRLLMEETGIPVVVAEDPLTCVARGGGKALE
                     MIDMHGGDLFSEE"
     gene            complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="JN001_001907"
     CDS             complement(11613..13553)
                     /gene="csrD"
                     /locus_tag="JN001_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase E specificity factor CsrD"
                     /protein_id="HAY9053158.1"
                     /translation="MRLTTKFSAFVTLLTGLTIFVTLLGCSLSFYNAIQYKFSHRVQA
                     VATAIDTHLVSNDFSTLRPQITELMMSADIVRVDLLHGDKQVYTLARNGSYRPVGSSD
                     LFRELSVPLIKYPGMSLRLVYQDPMGNYFHSLMTTAPLTGAISFIIVMLFLAVRWLQR
                     QLAGQELLETRATRILNGERGSNVLGTIYEWPPRTSSALDTLLREIQNAREQHSRLDT
                     LIRSYAAQDVKTGLNNRLFFDNQLATLLEDQEKVGTHGIVMMIRLPDFNMLSDTWGHS
                     QVEEQFFTLTNLLSTFMMRYPGALLARYHRSDFAALLPHRTLKEAESIAGQLIKAVDT
                     LPNNKMLDRDDMIHIGICAWRSGQDTEQVMEHAESATRNAGLQGGNSWAIYDDSLPEK
                     GRGNVRWRTLIEQMLSRGGPRLYQKPAVTREGQVHHRELMCRIFDGNEEVSSAEYMPM
                     VLQFGLSEEYDRLQISRLIPLLRYWPEENLAIQVTVESLIRPRFQRWLRDTLMQCEKS
                     QRKRIIIELAEADVGQHISRLQPVIRLVNALGVRVAVNQAGLTLVSTSWIKELNVELL
                     KLHPGLVRNIEKRTENQLLVQSLVEACSGTSTQVYATGVRSRSEWQTLIQRGVTGGQG
                     DFFASSQPLDTNVKKYSQRYSV"
     gene            13705..14679
                     /locus_tag="JN001_001908"
     CDS             13705..14679
                     /locus_tag="JN001_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY9053159.1"
                     /translation="MQALLLEQQDGKTLASVQTLDESRLPEGDVMVDVHWSSLNYKDA
                     LAITGKGKIIRNFPMIPGIDFAGTVRTSEDPRFHAGQEVLLTGWGVGENHWGGLAEQA
                     RVKGDWLVAMPQGLDARKAIIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVG
                     STAVALLHKLGYQVVAVSGRESTHEYLKSLGASRILPRDEFAESRPLEKQVWAGAIDT
                     VGDKVLAKVLAQMNYGGCVAACGLAGGFTLPTTVMPFILRNVRLQGVDSVMTPPERRA
                     QAWQRLVADLPESFYTQAAKEISLSEAPNFAEAIINNQIQGRTLVKVN"
     gene            15657..16127
                     /gene="accB"
                     /locus_tag="JN001_001909"
                     /gene_synonym="fabE"
     CDS             15657..16127
                     /gene="accB"
                     /locus_tag="JN001_001909"
                     /gene_synonym="fabE"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HAY9053160.1"
                     /translation="MDIRKIKKLIELVEESGISELEISEGEESVRISRAAPAASFPVM
                     QQAYAAPMMQQPAQSNAAAPATVPSMEAPAAAEISGHIVRSPMVGTFYRTPSPDAKAF
                     IEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE"
     gene            16138..17487
                     /gene="accC"
                     /locus_tag="JN001_001910"
     CDS             16138..17487
                     /gene="accC"
                     /locus_tag="JN001_001910"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009483995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HAY9053161.1"
                     /translation="MLDKIVIANRGEIALRILRACKELGIKTVAVHSSADRDLKHVLL
                     ADETVCIGPAPSVKSYLNIPAIISAAEITGAVAIHPGYGFLSENANFAEQVERSGFIF
                     IGPKAETIRLMGDKVSAIAAMKKAGVPCVPGSDGPLGDDMDKNRAIAKRIGYPVIIKA
                     SGGGGGRGMRVVRGDAELAQSISMTRAEAKAAFSNDMVYMEKYLENPRHVEIQVLADG
                     QGNAIYLAERDCSMQRRHQKVVEEAPAPGITPELRRYIGERCAKACVDIGYRGAGTFE
                     FLFENGEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHA
                     VECRINAEDPNTFLPSPGKITRFHAPGGFGVRWESHIYAGYTVPPYYDSMIGKLICYG
                     ENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLEKKLGLQEK"
     gene            complement(17579..18626)
                     /locus_tag="JN001_001911"
                     /pseudo
     CDS             complement(17579..18626)
                     /locus_tag="JN001_001911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000787050.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
     gene            complement(18623..19585)
                     /locus_tag="JN001_001912"
     CDS             complement(18623..19585)
                     /locus_tag="JN001_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000048618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9053162.1"
                     /translation="MSKVFTIGEILVEIMASKIGQPFDQPGIWNGPYPSGAPAIFIDQ
                     VTRLGVPCGIISCVGNDGFGDINIHRLAADGVDIRGISVLPQEATGSAFVTYHNSGDR
                     DFIFNIKNAACGKLSAQHVDENILKDCTHFHIMGSSLFSFHMVDAVKKAVTIVKANGG
                     VISFDPNIRKEMLDIPEMRDALHFVLELTDIYMPSEGEVLLLSPHSTPERAIAGFLEE
                     GVKEVIVKRGNQGASYYSANEQFHVESYPVEEVDPTGAGDCFGGAWIACRQLGFDVHR
                     ALQYANACGALAVTRRGPMEGTSRLAEIEAFIQRHDMSIREAAQ"
     gene            complement(19607..20596)
                     /locus_tag="JN001_001913"
                     /pseudo
     CDS             complement(19607..20596)
                     /locus_tag="JN001_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525780.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(20597..22096)
                     /locus_tag="JN001_001914"
     CDS             complement(20597..22096)
                     /locus_tag="JN001_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020245594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY9053163.1"
                     /translation="MTDVILDVSHIAKTFGHVQALKDITLSLRKGRVHTLLGENGAGK
                     STLMKILAGVYPPTQGTITLRGETITINNPQHSRQLGIAIIFQELSLSNNMTVAENIY
                     ANNEPRRFGIINDKKMLADCQNLLAERGIPLDPLEMVGNMSMAHRQLVEIAKALSYAA
                     DVVIMDEPTSSLSDNEAEILFNIIEKLKQRGCAVIYISHRMDEIMRISDDISVIRDGE
                     YIATHEKKNSDIQHLIAQMVGREMKNIWPARLGEIPDENVPAKLEVKNLSHPSLFKEI
                     SFAVRPGEVLGFFGLVGAGRSDVMKALFGLVSYQGTVLIDGKEVRITNPKQAIDHGIA
                     FVTENRKEEGLVLMHDVNMNTHHVAFQYNASRMGLINHRQEEAKTLQSIARMNTKVSS
                     VHQAVGALSGGNQQKIVLSKWLEKTPRILLLDEPTRGVDVGAKFEIYNVIRQLAAAGT
                     AIILVSSELPEVMALSDRLVVMRNKTIADIYSCENLTQTQVMTAATGVR"
     gene            complement(22157..>22864)
                     /locus_tag="JN001_001915"
     CDS             complement(22157..>22864)
                     /locus_tag="JN001_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HAY9053164.1"
                     /translation="LFANQDLNKQLSDVEDFITKKVDAIIISPVDSKGVQAAIIKADK
                     AGIPVITVDVAAEGVPVVSHVATDNYAGGVEAGKLMGKLLNGKGTVAIISYPALQSVV
                     ARVDGFKKGLSDTPDIKIVAEQPSITRAEALTTAQNIMQANANLNGLFGFGDDAALAA
                     VIAAKSAHNDNIKIIGFDGMKEARDAVDSEKTFAAVIRQYPDQMGAKAIDAAVDHLNG
                     KPVEKMIPVQPGVYTGK"
BASE COUNT         5669 a         6192 c         5459 g         5544 t
ORIGIN      
        1 attatgtgat ctaaatcact tttaagtcag agtgaataat ggaacgacta aaacgcatgt
       61 cggtgtttgc caaagtagtt gaatttggct cttttaccgc cgccgccaga cagctacaga
      121 tgagcgtttc gtccatcagt cagacggtgt caaaactgga agatgagttg caggtaaagc
      181 tgttaaaccg tagcacacgc agcattggcc tgaccgaagc cggtagaatt tactaccagg
      241 gctgccgtcg tatgcttcat gaagtgcagg atgttcatga gcaactgtat gccttcaata
      301 acacccccat cgggacgcta cgcattggct gttcttcaac tatggcacaa aatgttctcg
      361 ccgggctgac agccaaaatg ctgaaagaat acccaggttt gagcgtcaat ctggttaccg
      421 gaattccagc ccccgacctg attgccgacg gtctggatgt ggtgatccgc gtcggcgcgt
      481 tgcaggattc cagcctgttt tcccgccgtc ttggcgcgat gccaatggtg gtgtgcgccg
      541 cgaaaagcta tctcacacaa tacggcatac cggaaaaacc cgccgattta agtagccatt
      601 catggcttga atacagcgtg cggcccgaca atgaatttga actgattgca ccggaaggga
      661 tctcgactcg cctgatcccg caagggagat ttgtgactaa tgatccgatg acgctggtgc
      721 gctggctaac ggcgggtgcc gggatcgcct acgtgccgct gatgtgggtg atcaacgaga
      781 tcaatcgtgg ggagctggag atcctgctgc cgcgttatca gtcagatcca cgcccggttt
      841 atgcgttata taccgaaaaa gataagctgc cgctgaaggt acaggtcgtg atcaactcgc
      901 tgacggatta ttttgttgag gtcggtaaat tgtttcagga gatgcacggg cgcgggaaag
      961 agaagtaatt catattgtac tgttacgttc tacaaacctg tgccaacggg ttcccctcac
     1021 cctaacccca gaggagcgag gggaccgttc gtgcacgtag aaagattaat tatccttctg
     1081 aaaataatga aattattacg cagtaccgcc aacagtcagg ttatcaactt tcagcgttgg
     1141 ctggcccacg ccaaccggca aactttgccc ttctttaccg cagacaccca cgccgttatc
     1201 cagtttcagg tcgttgccaa ccatcgaaat ctgctgcatg gtttcgatac cggaaccaat
     1261 caacgttgcg cctctcaccg gcttcgttac tttaccgttt tcaatcagat atgcttctga
     1321 agtggagaaa acgaatttgc cggaggtgat atccacctga ccgccaccaa agttcggtgc
     1381 atagataccg tactcaacgg attcaataat ttcctgcggg gtcgatttac ccggcagcat
     1441 ataggtgttg gtcatacgcg gcatgggcag atgggcgtag gattcacggc gaccgttgcc
     1501 agtcggcgtc atccccatca aacgcgcgtt gagtttatcc tgcatgtagc ctttcagaat
     1561 gccgttctca atcagcacgt tgtactggcc tggcgtacct tcgtcatcaa tcgccaccga
     1621 accacggcga tcgaccatcg tgccgtcatc aaccacggta cacagttctg aagccaccag
     1681 ctccccgacc tgcccactaa atactgaagt gccgcggcgg ttgaagtcgc cttccagacc
     1741 gtgacctacc gcttcatgca acagcacgcc cggccaacct gcgccaagta ctaccggcat
     1801 ggtgcccgct ggtgcagcaa cggcagaaag attgaccagc gccatacgca ctgcttcttt
     1861 tgcccatgca tccgcacgga cttcgccgtc aagatcggca aggaagaact cataaccaaa
     1921 acgaccgcca ccgccactgg caccgcgttc gcgtttgcca tcttcttcga ccagaacgct
     1981 cacggaaaga cgcaccagcg gacggacatc cgccgctagc gtgccgtcgg tggccgcaac
     2041 cagaattaat tcatagacac cactgaggct ggcagtcact ttctgtacgc gcttgtccgc
     2101 ttcgcgagca accttatcga cgcgacgcag gatatccagc ttctcttcac ggctcatgct
     2161 ttgcagcgga tctaccgagg tatacaacgg gctatgccct accgcgccca gcgtctgtac
     2221 tttgccatca ccactatcac ggacgatggt gcgcgccgct tgcgcactct gttccagcgc
     2281 cagcaggctg atttggtcag cgtaagcaaa tccggttttt tcaccgctga ttgcacgcac
     2341 gccaacgccc tgatcgatgt tgtaagaacc atctttaata atgcggtctt ctaaaaccca
     2401 ggattcgtga tagctcgact gaaaatagag atcgccataa tcaaggcgac gttcggccag
     2461 ttgaccgagg atcgcgaaca agtcctgatg tttcaggccg ttcgccgcta gcaattgttc
     2521 acttactagg ttaagactca tcgtttttgc tactcgttag ttactgcagt agaggatttt
     2581 ttacggctgc cggatgcggc gtgaacgccc tatccgacct acggttatgt tctggctcgt
     2641 tggcctttgg caacgattat catatgagat tggggcaatt acgcgccctc gtcaaatcat
     2701 tgcgcttttt ctttacgcgg ttggcgcaac acttcgttga tttgcggatc gtccagcgga
     2761 cccgaaatgt gatagcgcaa aatggagact ttgctccaca gcggccccag cactttactg
     2821 gctgcaaata ctgccgcgcc aacaatgggg ttaaccgcaa aagccgcagc cacgcccacc
     2881 gtcgcagaaa tctctggtgc gacaaccgct tccatattca ggtcgcgacg taccagattt
     2941 accgaccctt tcatggcgat atccgcctcc aggccatcca ccagcgtgtc gtcggtgtgc
     3001 ataacgccgt ctttaatcca cgcggtgctg cgaatggagt caaaatagaa cccttcgcca
     3061 aaagtgtctc tgaaatcaaa acgcagctta cgcatcaggg catcaacgct caataagcgc
     3121 agcaattgcc cggcatgtcc ggtattgatt tcggtaattt cgcctttacc cagttgagta
     3181 tgaatgatgc cattcaacgt cgcctcatct ggttgccagg gtgctttgcg ccagtgtaaa
     3241 tcgtaatcca cattaaatga cgactggcgt atgggcgtcg tgacaccaaa aaattctgcg
     3301 gcggcatcaa ttttctgccc gcgcagtttt cctttcagcg aggtacgttc attccccgga
     3361 ttattaaccc attcaccatc ggcagtaagc cgcgagaaac cagtatcaat cagtccattg
     3421 gtcagcgtta acgtatcgcc agaaatggtg agatcactgt caatacgacc gaatttttgc
     3481 ccccagaacc agcactctgt gcatcgtatt tgtgcgtccg gccagccacg gaagttaatg
     3541 cgctccgttg tcgggaaagg tgatgacggt gttgaatcac cacgagtttt cgccacgctc
     3601 gggttgtaat aaagatattt gatattcgcc agccacggcg cgttattacg catcgccagc
     3661 gtggcattga tttcacgccc ctgtgcctca accagggtgc catttgccgt cggttgcgaa
     3721 acaatactca ggttattcca ttgctgattt cccagtgaca acataggcgt acgtaacgtt
     3781 atgtgttgtg ggaaactcgc tgcaccaccg acactctccg cagcgccttt ctggaacagg
     3841 gccagccact cggcaccatt catcggcggc atattgagtt caacgccact ttgttccggc
     3901 aacggcggga gcgttttact gtctgccgcc caaatagcac gatcgagcgt cagcttttga
     3961 ccaagcaacc agcggctatt gaaatggtta tccgcaccag cctgtccggt taattcaaag
     4021 ctgctgagat tgccatcaac cttaacgttt accggcagtg gttcacccgc aggtttggct
     4081 aacggtgaag gtaagtgact gctcacatta ttcagatcgc cgttcagctc tacgttatag
     4141 gtcgcgccag catgataagg cagatcaatg cccactttac catcccacgc cacgctgcca
     4201 ctcaatgctt cgttcaccgc tgcaggcaga acgccggttt tcgccggttg ccagttaccg
     4261 ttgaggttta ccgcaacctg gtaggctttt gccccttctt tggtggaaaa atccacgttc
     4321 aacggctgat taaaccagct tgctgtcagt ggttcacttt gcagatcgcc attgataaag
     4381 ctgaatttac cgctcaaatt tttcagggtg ctgtcgagta gtttgataaa cagactgtta
     4441 ttacgcagcg tcacttcacc tttcgcggtt accagttcgc cgttcagcgg gatatcaaga
     4501 tgtaagcgag cattcacatc gccgtcgagc tggagttctt gcagggtcgc acccagagaa
     4561 tctttcagcg gtgtctcatc aaagtaaggg ccaacggctt tacccggacc tttaatgtca
     4621 gcgtcaatca gcagtttttc tttcgagtag tcagggatca ctgcggtgag attactcgcg
     4681 cgcacgccgc ccagattaac gtcatcggtt ttcatccata aaccgtcgtt aataaagtcc
     4741 agttcaatat caaggttagt taatgcaggc cagtccggct ggaaggcaaa cttcgcgtta
     4801 cgcagcggca ccagcacttc aaactgacct tcgttgtgtt tataggggaa gagttgcgga
     4861 ttgccaccat aaaccagcgt cgcgttatcc gcttcaccgc cctgaatcgc gccacttaag
     4921 taatcaacta ggtctttacc catcaagttt tccgggaaat agcgccaggc ttgtgaacca
     4981 tcatcggtac tgatgccagc cagaataccc agccagggtt catcgttagc aggttgcagg
     5041 taacgaaaac cgccgcgcgc atggacagct ttggctttaa cgtcaatatt acgcccatcc
     5101 aggtggaaac ctttgtcatt gttcagccag cttatagttg cctggccgtc ggcgatttcc
     5161 agtggcgcac ggaataccgt ttcgtaaggc atctttgcct gcttcatcga cgcggtaagc
     5221 aaaccatttt caacgctgcc ggaaagcgtc ccggagaagt gttccgcacc cggtaataat
     5281 ttccattgct tccaggccag atcgctccac gatgcctgaa aacgggtctt gtctgccgcc
     5341 tgaagcggga tatccagcgc cagagtgtta atcttgccgc tcggttgtgt ggagcgccaa
     5401 acatcaccca gtgcaggtga aagtttcgcg gccagcgggc gtatgccctc caggcctgcc
     5461 agctccagat tactggcgcg aatccggagt tcgtcactgc gtttattgtc tttgccgcca
     5521 acgtcctgtt ccggtatcca ggccagcgtc aatgctccgc tcggccaggg tttgccgtcc
     5581 atcgtgatcc gtgtatcggg aatagagaac tgccagcccg gattttcacg cgtaatatgc
     5641 gcggtcagat tatccaccga cagcgtatgc gtttgcttct cgcccaacca gctggcaccg
     5701 ccctgtttca gccagacgtc accgccggtt acatcgcctt tgtcgatcgt catccagcct
     5761 tcaagggaga actgtgccgt ttccagagca atattgtcct gcatccattt accgagccac
     5821 ggcttcaggt cgatgtcatc cgcctgtagc cagacgcgac cattgcttaa caacccctca
     5881 tcatcgcgca aatccatgcg cacctgcatc acgccgtgct gtccggtaag gctggagagg
     5941 cttaccaggc cttccgcacg gtgtcgacgt ggatcgttca gccaggtgag ttgtgggatc
     6001 gccagctcgg cgcgctgacc ggatggcgtc agaaaactga cttcactgtc gcggagatcg
     6061 aaatggtcaa attgacgaag aaacagatcg ctgatgtgac tggcttccag gctatcatta
     6121 ccaccaccgc tggtgatagg agtgttggtg cgaaagcgca gctgccagaa agtgaggtcg
     6181 cgaaactgcc agcgcatatg taacaagctc tgccagacat ccagcgccag agtaacgcgt
     6241 ttaaccgaaa attcgccgcc atcttttagt tctgcacgga tgtcgtgtgc ttcaagcgtc
     6301 gggccaaaat tctgccagct ggctgagagc tgactggctt ctaccggcat gccagtcgcg
     6361 gattctattt tgttgaggat ttccggacgc caggcgtcaa gatgcggtaa agcaatacgc
     6421 aggccgctaa ccagcagggc tgcgatcaca acgagcgcgg ctccagtaag cagtaaaatc
     6481 cccggcaatc gcctcacccg tcactccttg tctgctaaaa atgtgactca aaaacccttt
     6541 gccggatggc ggcccagcat ctgtttacat cattacgacg tcaaactgct cctggttata
     6601 gagcggttca atttgtactt taacctgttt gccaacgaaa atttccactt ccgccagcga
     6661 gtgtgactct tcgcctttca aggcttcagc tactgccgga gaagcataga ccaggaaacg
     6721 gtcggagtcg taagcatggt ggacacgaac aatctcgcgc atgatttcat agcataccgt
     6781 ttccacggtt ttcaccgttc cgcgaccgtg gcaggttggg cattcgttac acagtacgtg
     6841 ctcaatgctt tcgcgggtgc gtttacgcgt catctccacc agccccagcg ccgaaaaacc
     6901 attaacgctg gttttcaccc ggtctttgct caacgcctgc tccagcgagt gcagcacgcg
     6961 gcggcggtga tcttcattat tcatatcgat gaaatcaata atgataatcc cacccagatt
     7021 acgcaaccgt aactggcgag cgatagcctg cgtcgcttca atattggtat tgaaaatggt
     7081 gtcgtccaga ttgcgatgac cgacaaacgc tccggtattg atgtccacgg tggtcatcgc
     7141 ttcggtctgg tcgataatca gataaccacc ggatttcagt tctactttgc gttccagcgc
     7201 tcgctggatt tcgttttcga catcaaagag atcgaaaatc ggctggcgtc cggtgtaatg
     7261 ctccagcttg ctggtcatct cgggaatgta ctccgaggta aactccagca atgcttcgta
     7321 agtcaggcgt gagtcaacgc gaatgcggtc cagttcggcg tcggcgaaat cacgcagaac
     7381 acgctgcgcc agcgccagtt cgccgtacag ctgataacgg gtctgcgggc gttttttacg
     7441 ctccataact ttggtccaga cgcgtttcag ataagcggca tcggaggcca gttcagcctc
     7501 gccaacccct tccgctgcgg tacggatgat aaacccgccc tgctcgtcgc aatactctgc
     7561 gaccactttt ttcaggcgtt cacgttctga ttcgctttca atacgttggg aaaccccaac
     7621 gtgagaagcc cctggcataa acaccagata gcgagaaggc agcgtgatat cggtggtcag
     7681 gcgcgcacct ttagtgccaa gcggatcttt caccacctgc accatcagat cttgcccctg
     7741 acgaaccagt tccgagatgt cgcgcaccgt gaattgcttt tgttcttcac ccgccacaca
     7801 ttcggtgtgc ggcatgatat cggatgcatg aagaaacgcg gctttatcca gcccaatatc
     7861 tacaaaagcc gcctgcatac ccggaagtac acgacttaca cgacccttgt agatattgcc
     7921 tactattccg cgtcgcgcct cacgttcaat atgaatttcc tgcagaatac cgccatcaat
     7981 atacgccact cgcgtttccg aaggcgttac gtttactaac aattcagccg tcatgtttat
     8041 cccttttctc acgcagtgcg ttaaaattac ttaataattc atacgtttca accagcggta
     8101 agccgactac ggcgtgatag ctgccattta tcttcctgac aaaacagcca cccagcccct
     8161 gaataccgta tgcacctgct ttatctaacg gttcaccgct ggcgacatag cccgcgatgt
     8221 cttcgtctgt taacgttctg aaagtcacat cggtgaccac caggcaatcg agaatgtgct
     8281 ggctgtcggc caacaccact gccgtcatca cctgatgggt ctgacccgat aatttgcgca
     8341 acatctgcgc cgcatgctct gcgtcgcgcg gtttctccag cacttctcca ttcaggataa
     8401 cgatagtatc cgcacccagc accgggagat cctgcgccgt ttgcgcgaca cccgcctgtg
     8461 ctttcttgtg tgccagacgc acaacatact gctgcgcgct ctcctgcggc tgacgctgct
     8521 cctcaatgcc cgtaacaata cgttcaaagg tcacgccaag ttgcgcaagt aactcctgac
     8581 gacgcggaga accggaagct aaatacagag aagtcataga aacctttatt gcactgcaaa
     8641 ctgctgacgg actttacgca tcagcaagaa aatccacggc cagagcaccc cattgactac
     8701 actactccag aacacttccg gtctgaaaga gacgttaatc actaaaaact ctgcccagaa
     8761 aacaataata tccaccacca gcgaaagcaa catgacgact agcgcctgct gccataatgc
     8821 gaggttgcgg aaaagctggt atttcagcgc caccaggtaa gcaatgatgc tcatcgccaa
     8881 tacgcgtacg ccaagcgtcg agccgctgat cagatccagt atggcaccca tcacaaaacc
     8941 tgtgcccaca tttacgcgat ggggcaaggc caggatccaa tacaacaaga taagtaacac
     9001 ccagtttggc cggaaaacaa tcaggttatc cggccagggc atgatttgca gcaacagcgc
     9061 aatgaggaaa gagagccaga ttacccaacg tccctggcta cgatagctcg ccactattgc
     9121 cctcccggcg cacgcgcagg cggttgagca ccactttgcg gcggcgtagc cctttgtgga
     9181 gagcgattag cagcaggcgc agtagctgca tttcctgtcg tcggttgctg cggagtcggc
     9241 tgagcgatcc ccgttgtcgg ttcaggtaac tttggcccca tcgcgtctgg cgaaggcaat
     9301 acctgcggca tcatctgcat cagacgttca ttagcaacac gatgcacctc ttccggcgtc
     9361 atcgggttag cgccgttacg atccgcgccc cacagcagca gcagataacg caaacgttgc
     9421 agtcctgcag tcggacgcgc ctgaatcaca gtataagcgc gctgggtatc gagttttacg
     9481 gaagagacaa ccgcgaccgg atagccttcc gggaaacgac cgcccagacc ggaggtcacc
     9541 agcacatcac caacacgaat atccgtattc gctggcagat gctcaagctg caaatcatct
     9601 gtacaaccgt taccggctgc aattacgcgg atatcgttgc gcagcacctg gattggcagc
     9661 gcgtgggtcg catcacaaat cagcagcacg cgactggtca gtttagcgac ggccaccacc
     9721 tgaccaacaa cacctttgtc gctgatgacc ggctggcctt cataaacgcc attaacgcta
     9781 cctttatcga taacaacttg atcgctataa ggatcgttaa ccgtggagat aacctgagtc
     9841 accattttct gctcatcctg acgcagcggg gaacccagca gctcgcgcag acgcgcgttc
     9901 tcctgtttgt attgtccaag catcagcagt tcactgtttt tcagcaacag ttcctgacgt
     9961 aacgcccggt tttcaagttc tagttggtca cgcgaggcca gcgtctgcga tacgccatcc
    10021 agcaattcac gaggagcatt ggaaacaaag tagaaaggac tgacggcggt atccatataa
    10081 gtacggattt gactgaacgt ccccaggcgg ctgtcggcaa taataatgcc gagcgccacc
    10141 agcaccgcca gaataaggcg aatctgtagc gacgggccac ggctaaaaat tggcttcata
    10201 agttatgcgt attctcgtat cagaccaggc agggtaaaca gacatttccc ctgcctgcat
    10261 ccgattactc ttcgctgaac aggtcgccgc cgtgcatgtc gatcatttcc agcgctttgc
    10321 cgccaccgcg cgccacacag gtcagcgggt cttcagcaac aacgactgga atgccggttt
    10381 cttccattaa caaacggtca aggttacgca gcagtgcgcc accaccggtg agcaccatgc
    10441 cgcgctcgga gatgtcggaa gccagttccg gcgggcactg ttccagtgca accattaccg
    10501 cgctcacaat accggtcagc ggttcctgca gtgcttcgag gatttcgttg gagttcaggg
    10561 taaaaccgcg tggaacacct tctgccaggt tacggccacg aacttcgatt tcacggactt
    10621 catcgcccgg gtaagccgaa ccgatttcgt gcttgatacg ttctgcggtg gcttcaccga
    10681 tcagagaacc gtaattacga cgcacatagt tgatgatagc ttcgtcgaaa cgatcaccac
    10741 caatgcgcac ggaagaggag taaaccacgc cgttcaagga gataacagca acttcagtgg
    10801 taccaccacc gatatcaacc accatagaac cggtcgcttc agaaaccggc aggccagcac
    10861 caattgcggc agccatcggt tcttcaatca ggaagacttc acgggcacca gcgccctgcg
    10921 cggattcacg aattgcgcgg cgttcaacct gggtcgcgcc aaccggtaca caaaccagaa
    10981 cgcgcgggct tggacgcata aagttgttgc tgtgcacttg tttgatgaag tgctggagca
    11041 ttttttcagt cacgaagaag tcggcgataa cgccgtcttt cattgggcga atggcagcaa
    11101 tattgcccgg cgtacggccc agcatctgct tcgcgtcatg acctactgca gctacgcttt
    11161 tcggtgaacc ggcacgatcc tgacgaatgg ccaccacgga aggctcattc aatacgatgc
    11221 cttgtccttt tacataaatg agggtattcg cagtacccag gtcaatggac aagtcattgg
    11281 aaaacatgcc acgaaatttt ttcaacatac taagggataa tcctgaaagc tggggcggaa
    11341 aagaaaatcc gcttacttta ccaaccacac gcagcagcga caaggcgcaa aaatcatctg
    11401 ctacggtgaa aattagtgca gttcgtttcc tttgttacaa atctctgcct gagtccagaa
    11461 aggcttaatg catcagcagc attcctcgcc tgtttgcaac cgcgtaaggt cattcatctg
    11521 catatgtgct gcaacaatct ggcgagcaga caagcacact cccatgagac gcagcgcgcg
    11581 ttattctacg tgaaaacgga ttaaacggca ggttaaaccg agtatctttg tgaatatttt
    11641 ttcacgttag tatcaagtgg ctgtgaggac gcgaaaaaat ccccttgccc gcctgtaaca
    11701 ccgcgctgaa tcagggtctg ccactcgctt cgcgaacgca caccggtggc gtaaacctgg
    11761 gtgctggtcc cggagcaggc ttccaccagg ctttgaacca gcagctggtt ctccgttcgc
    11821 ttctcaatgt ttctgaccag ccccggatgg agcttgagta actcaacatt aagttctttg
    11881 atccaactgg tgcttaccag cgtcaaacca gcctggttga cggctacccg tacccctaaa
    11941 gcattcacta aacgaataac aggttgtaaa cgactgatat gttgacctac atcggcctct
    12001 gcaagttcaa taattatgcg ttttcgttgt gatttttcac attgcattaa cgtatcgcgc
    12061 agccaacgct gaaaacgcgg gcgaatcagc gactcaacgg taacctgaat cgccagattt
    12121 tcctctggcc agtaacgcaa tagtggaata agacggctga tttgcagacg gtcatactct
    12181 tccgataagc caaactgcaa gaccatcggc atatactccg ccgagctaac ctcttcatta
    12241 ccatcgaaga tgcggcacat gagttcgcga tgatgaacct gaccttcgcg agtaaccgcc
    12301 ggtttttgat aaaggcgcgg gccgccgcga ctgagcattt gctcgataag cgtacgccag
    12361 cgaacattac cgcgtccttt ttcaggcaac gagtcatcgt aaatagccca gctattgccg
    12421 ccctgcaatc ccgcattacg cgtggcagac tctgcatgtt ccattacctg ctcggtatcc
    12481 tgaccactac gccaggcgca gataccaatg tggatcatat cgtcgcgatc gagcatttta
    12541 ttgttcggca aggtatcgac ggctttgatt aactgaccgg cgatgctctc tgcctctttt
    12601 aacgtccggt gcggtaacag cgcagcaaaa tcactgcggt ggtaacgcgc cagcagtgcg
    12661 ccagggtagc gcatcataaa tgtcgacagc agattcgtca gagtgaagaa ctgttcttca
    12721 acctggctgt gcccccaagt atcgctcaac atattgaaat ccggcagacg aatcatcatc
    12781 acgatcccgt gggtacctac tttctcctga tcttccagta acgttgctaa ctgattatcg
    12841 aaaaagagtc ggttattgag gccggttttc acgtcctggg cggcataaga gcggatcagc
    12901 gtatcaagac ggctgtgttg ttcgcgtgcg ttctgaattt cacgaagcag cgtatccagc
    12961 gcactgctgg ttctgggcgg ccattcatag atggttccca acacattaga gccacgctca
    13021 ccgtttaaga tacgagtagc ccgggtttcc agcaattctt gcccggcaag ttgccgttgt
    13081 aaccagcgta ccgccaagaa gagcataaca atgataaagc taatcgcccc cgtgagcggc
    13141 gcggtggtca tcaacgaatg gaaatagttg cccatcggat cctgataaac cagacgcagc
    13201 gacatccccg gatactttat caacggaacg ctcagttcac gaaacagatc gctggagcca
    13261 accggacgat aactaccatt tctggccagg gtataaacct gtttatcacc atggagcagg
    13321 tctacacgaa cgatatctgc cgacatcatt aattcggtaa tttgtggcct taatgtgctg
    13381 aagtcattcg acacaaggtg ggtatcaatc gccgtcgcca ccgcctgaac gcgatgacta
    13441 aacttatact gaattgcgtt gtagaaactt agcgaacagc ccagcaaagt cacaaaaatt
    13501 gttaacccgg tgagcagcgt aacaaaggcc gaaaatttcg tcgttaatct catccttgtg
    13561 ttaactccga tagtgaggaa gcgggcatac tagcaaatca gatttatctc gcaatttatt
    13621 gcgcttcatc ggctttgctt ttccattagc gagtataatc ttcagaaatt attttccaat
    13681 ccatcatgca catgaggacc acttatgcag gcgttacttt tagaacagca ggacggcaaa
    13741 actctcgcat cagtacagac tctggacgaa agtcgcctgc cggagggcga tgtcatggtc
    13801 gatgttcact ggtcgagcct gaactataaa gatgcgctgg cgattaccgg taagggaaaa
    13861 atcatccgta attttccgat gattcctggg atcgattttg ccggaactgt acgcaccagc
    13921 gaagatccgc gttttcatgc cggtcaggag gtgttactca ctggctgggg cgttggtgaa
    13981 aaccactggg gtgggctggc ggagcaggcg cgagtgaaag gtgactggct ggttgccatg
    14041 ccgcaagggc tggacgcgcg taaagcaata attatcggta ctgccggttt taccgccatg
    14101 ctgtgtgtga tggcgctgga agatgccggt gttcgcccgc aggacgggga gattgtcgtg
    14161 acgggtgcca gtggtggcgt cggcagtacc gccgtggcgc tgctgcataa gttgggttat
    14221 caggtcgttg ccgtttccgg tcgcgaaagt acccatgaat atctgaaaag tttaggtgcc
    14281 agccgtattc tccctcgtga tgagtttgcc gaatcccgtc ctctggaaaa acaagtctgg
    14341 gctggggcaa ttgacactgt tggcgacaaa gtgctggcaa aagtgctggc gcaaatgaat
    14401 tacggcggct gcgtggcggc ctgtggtctg gcgggtggtt ttactctgcc aaccacggtc
    14461 atgccattta ttctgcgtaa tgtccgtttg caaggggtgg attcagtaat gacgccacca
    14521 gaacgccgcg cacaagcctg gcagcgactg gtcgccgatt taccggaatc attctatacc
    14581 caggcggcaa aagagatatc tctgtcagag gcaccgaact ttgccgaggc catcattaat
    14641 aaccagatcc agggtcgcac gctggtgaag gttaactaac catttagcaa ggaataataa
    14701 gagagggaac tcattttgac atcattattc aatcggttaa cgggaaaagc ggttagccgg
    14761 acagctttcg tcgaacacct tggtcaggaa gttgtacaac atcatccaaa ctggaaagtc
    14821 atgatttcga ctgaccacaa attgatgcgc attgatactc ctctaaacag ccattattga
    14881 tacgcctccg tcgcctgtta ggtttatggt gctttgcctg ggcgacacta cgcttaacct
    14941 gttactgatt tctggtacca tggggtgaat aatctgattt tatttgacta caaattaacc
    15001 actcgaacct atttaatgct gagaattgtc agtcggttga ttttgcgtgc tttagcattc
    15061 acatctatcc agacgatgca gtgaaaattg ggtaatcccc agcaaccgct gcgtaatgtc
    15121 gtctatcttg tcgcgatcct ggcatcccta cattatttgt ggtctgtgaa gattatctca
    15181 ttgcagcccc tcatcttcgc agggctggct ttacagcttt tcaccttacg ttataagaag
    15241 ttccgtcgat gatggcgcta atttcgtgaa ttgtgcggct tgttgcaaat tacacggtgt
    15301 tgaaggttat ttacatgtta gctgttgatt atcttccctg ataagaccag tatttagctg
    15361 ccaattgcta cgaaatcgtt ataatgtgcg acctcgtcct ccctgacgca gtttttgcgc
    15421 tgcggaaaag gtgacattgg cgcaacgaag gtatattttg ttttttgccg gaggatagca
    15481 gcagatcgct gcacaatgtc cgtcaagtct aacattgata ctctggggca aaatagaccg
    15541 gcgtcccggc ctgctggaat ttatcgctat gcatacagct gtcggggcat acgctttaca
    15601 gacggcggtg aaacgcctgt cacaatcaca ctaaacaaag agtacggaac ccactcatgg
    15661 atattcgtaa gattaaaaaa ctgatcgagc tggttgaaga atcaggcatc tccgaactgg
    15721 aaatttctga aggcgaagag tcagtacgca ttagccgtgc agctcctgcc gcaagtttcc
    15781 ctgtgatgca acaagcttac gctgcaccaa tgatgcagca gccagctcaa tctaacgcag
    15841 ccgctccggc gaccgttcct tccatggaag cgccagcagc agcggaaatc agtggtcaca
    15901 tcgtacgctc cccgatggtt ggtactttct accgcacccc aagcccggac gcaaaagcgt
    15961 tcatcgaagt gggtcagaaa gtcaacgtgg gcgataccct gtgcatcgtt gaagccatga
    16021 aaatgatgaa ccagatcgaa gcggacaaat ccggtaccgt gaaagcaatt ctggtcgaaa
    16081 gtggacaacc ggtagaattt gacgagccgc tggtcgtcat cgagtaacga ggcgaacatg
    16141 ctggataaaa ttgttattgc caaccgcggc gagattgcat tgcgtattct tcgtgcctgt
    16201 aaagaactgg gcatcaagac tgtcgctgtg cactccagcg cggatcgcga tctaaaacac
    16261 gtattactgg cagatgaaac ggtctgtatt ggccctgctc cgtcagtaaa aagttatctg
    16321 aacatcccgg caatcatcag cgccgctgaa atcaccggcg cagtagcaat ccatccgggt
    16381 tacggcttcc tctccgagaa cgccaacttt gccgagcagg ttgaacgctc cggctttatc
    16441 ttcattggcc cgaaagcaga aaccattcgc ctgatgggcg acaaagtatc cgcaatcgcg
    16501 gcgatgaaaa aagcgggcgt cccttgcgta ccgggttctg acggcccgct gggcgacgat
    16561 atggataaaa accgtgccat tgctaaacgc attggttatc cggtgattat caaagcctcc
    16621 ggcggcggtg gtggtcgcgg tatgcgcgta gtgcgcggcg acgctgaact ggcacaatcc
    16681 atctccatga cccgtgcgga agcgaaagct gctttcagca acgatatggt ttacatggag
    16741 aaatacctgg aaaatcctcg ccacgtcgag attcaggtac tggctgacgg tcagggcaac
    16801 gctatctatc tggcggaacg tgactgctcc atgcagcgcc gccaccagaa agtggtcgaa
    16861 gaagcaccag caccgggcat taccccggaa ctacgtcgct acatcggcga acgttgcgct
    16921 aaagcgtgtg ttgatatcgg ctatcgcggt gcaggtactt tcgagttcct gttcgaaaac
    16981 ggcgagttct atttcatcga aatgaacacc cgtattcagg tagaacaccc ggttacagaa
    17041 atgatcaccg gcgttgacct gatcaaagaa cagctgcgta tcgctgccgg tcaaccgctg
    17101 tcgatcaagc aagaagaagt tcacgttcgc ggccatgcgg tggaatgtcg tatcaacgcc
    17161 gaagatccga acaccttcct gccaagccca ggcaaaatca cccgtttcca cgcacctggc
    17221 ggttttggag tgcgttggga gtctcatatc tacgcgggct acaccgtacc gccgtactat
    17281 gactcaatga tcggtaagct gatttgctac ggtgaaaacc gtgacgtggc gattgctcgc
    17341 atgaagaatg cgctgcagga gctgatcatc gacggtatca aaaccaacgt tgatctgcag
    17401 atccgcatca tgaatgacga gaacttccag catggtggca ctaacatcca ctatctggag
    17461 aaaaaactcg gtcttcagga aaaataattt gtgacgcgcg gtgttttcat cgcgcttagc
    17521 aaagaacgta atcaacgccg ggcctgttaa cgctgcccgg cgtttttatt gccgttagct
    17581 aacggtagcc tgcaatttcc gctttcaacg cgctcatttc agcatcgcca tcaacaattc
    17641 ccagctcaaa gcagtatttc tttgtttccc ctggctcaat aaagggcaga cgcccctgcg
    17701 ctcgttcttt atcacgaccg tcaggaaaac tattactgac ctccagtccc ataacatact
    17761 cacccgcgcc taaatttttc cactggataa agttgggtag ctgcatggtg tcgaatttct
    17821 cgtaaattcc ccaccccagt tcggcgttca ccagagcaac tttactcatc ccctgactgt
    17881 cgctattcaa cgtgagatag taaacctgct cgtcaaaacc gggctgtggg gtacaaatct
    17941 ccagatgact ggttaaccct tccgccgcat gcggagttcg tggcgttacg cttttagccg
    18001 acagcaagat ttctggcctg tggcgataat aaaggccagc cgtaattaaa gtgataaaga
    18061 atttgcagcg gctggcgggt gaaaccatga ttagtcacct tgtcttcaat gcgcagcaca
    18121 ttttcgccat aacggcagcg aatggtcctt tccagcgtca gattttcgcc gaacagtcgc
    18181 gtttcccgta ctttgccatt gatgacaaat tcaatgccgt cgtcggtccg ttctgtgcga
    18241 taccccacct cttctgctgg agtcgcagcc aaacgcccgt gtaaccccag cgtttctcct
    18301 tcatcctcac aaggcgtgcc aatgtagcta agtccgcagg tagtcagtaa ccccgcgtaa
    18361 aagctacgta aaaatccgtt gccctgagac tcaaaaaaag cgggggcgac aatgccgttg
    18421 ggggtgataa aagaaagcgc cgtgtccttg tagctggccc atgcaatatc cagcgcgcga
    18481 tcttttacca ccgtaaatgc cagtcccgca ccagtacgga catcaaacgc ttctgtaccc
    18541 tttgctctgc cactacgtaa ctcatagtgt ttaattccgg caacctgcga gagatcgcca
    18601 atccacgacc aaatttcgtt tttcattgtg ctgcttcccg aatggacatg tcatggcgct
    18661 ggatgaacgc ttcgatttcc gcaaggcgag acgttccctc cattgggcca cgtctggtta
    18721 ccgccagcgc accgcaggca ttggcatatt gcagcgctcg atggacgtca aaccctagct
    18781 ggcggcaggc aatccacgcg ccaccaaagc agtctcccgc accggtcggg tcaacttctt
    18841 ccaccggata gctctcaaca tgaaactgct cattcgcgga gtagtaactg gcaccttgat
    18901 tgccgcgctt cacaatcacc tctttaacac cttcttcaag aaaacctgcg attgcacgct
    18961 ccggcgtcga atgtggcgac aagagcaaca cttcgccctc gctgggcata tagatatccg
    19021 ttaactcaag aacaaagtgg agggcgtcac gcatttctgg aatatcgagc atctctttac
    19081 gaatattagg gtcgaaagaa ataacaccac catttgcttt aacgatagtt accgcttttt
    19141 ttactgcgtc taccatatga aacgaaaaca gggaagagcc cataatatga aaatgggtac
    19201 agtccttcag aatattttca tcaacatgct gcgccgataa tttaccgcaa gcggcattct
    19261 taatattaaa aataaaatcg cgatcgccag agttatgata agtaacaaag gcactcccgg
    19321 tagcttcctg aggtaagact gaaatccccc tgatatccac accgtcagca gccagacgat
    19381 gtatattaat atcaccaaag ccatcattcc ccacacagct aatgatgccg cacggaacgc
    19441 caagacgtgt cacctggtcg ataaaaatag cgggcgcacc actgggataa gggccgttcc
    19501 agatacctgg ttgatcaaat ggctggccga ttttactcgc cataatttca accagaattt
    19561 ctccaattgt gaagacctta ctcatatgat taattccttg aaatgattag ctgcgttttc
    19621 ttttatttct tacgtcaaaa taaacggcta caagaatgac taatccttta accaccatct
    19681 ggtaaaaata gggaacattc attaagttca tgccattatt aataacgccg atagttaatg
    19741 cgccgatcac cgtccccacc acggttccat agccgccgtt caggctggtg cctcccagta
    19801 cagccgcagc aatagcatcc agttcgtagc tcaacgcgga attcggttac ccggaataga
    19861 ggcgtgaggc gaggatcatc ccgctgatac ctgccagcac ggctgtaatc ataaagactt
    19921 taattttcaa gcgggtgaca tttatccctg aataaattgc cgcttcttta ttaccaccag
    19981 tgatataaat ttttcgtcca aaggttgttt tagtaagaat gaagtggtta atcagcaata
    20041 agatgattaa tatccagatt ggaataggta tatagagaaa ttctccattc cccagtgcca
    20101 gaaaggcatc atctttaatc atgatgggca taccatcggt cactatataa gcgataccac
    20161 ggaagatccc catagtagca acggtgacaa taaacgacgg gatccccgct atagccgtca
    20221 agccaccatt tatcatcccc agagccagtg ctgcaataat ggataatggg accaataaaa
    20281 taaatggaat tccccatgaa gccccaagcg cagcaaatgt gccaatcaat gcaatggttg
    20341 aaccgaccga taaatcaata tcgccaagca aaagtacata agtcattcca taggcggtaa
    20401 ttgcaattat cgaaacctga agaataatat tagtaatgtt gttggcggta aaaaaactgt
    20461 cattaataaa actgaacaga atgattaaca ccaccattcc actgaggata ccgccatatt
    20521 gcctgaagac ttttttaaaa ttatttgcaa tgggaatttc cgaaggtttc ggactggcaa
    20581 gagttttctc tgtcatttaa cgtactcctg ttgcagcggt cattacctgt gtctgcgtta
    20641 aattttcaca tgaataaata tcggcaatcg ttttattacg cattaccacc agacgatcgc
    20701 taagtgccat gacttctggc agttcagagg acaccagaat aattgctgtc cctgccgcag
    20761 ccagttgacg tatcacgtta tagatttcaa attttgcgcc gacatccact ccgcgcgttg
    20821 gctcatcgag caataaaata cgcggagttt tctccagcca cttcgataac acgattttct
    20881 gttgattacc gccgctcagc gctcccactg cctgatgtac agaactcact ttagtgttca
    20941 ttctggcaat tgattgcagc gtcttcgcct cttcttgtcg gtgattgatg agtcccatcc
    21001 gcgaagcgtt atattgaaac gccacatggt gcgtgttcat attgacgtcg tgcatcagca
    21061 ctaacccttc ttccttgcgg ttttcggtca caaaagcaat gccatgatca atagcctgtt
    21121 taggattagt gatcctgact tccttaccat caatcaacac agtcccctga tacgaaacga
    21181 ggccaaagag cgccttcatc acatcggaac gcccggcccc caccaggcca aaaaatccga
    21241 ggacctcccc cggacgcaca gcgaaactga tctctttaaa aagcgaagga tgggaaagat
    21301 tttttacttc cagttttgca ggaacatttt catccggtat ttccccaaga cgtgctggcc
    21361 aaatattttt catttcccga ccaaccattt gggcaatcaa atgctggata tcactgtttt
    21421 tcttttcatg cgtggcgata tactcaccgt cgcggatcac cgaaatatca tctgaaatcc
    21481 gcataatttc atccatgcga tgagagatat aaataaccgc acagcctcgc tgctttaatt
    21541 tttcaataat gttaaacaga atctccgctt cattatcact tagcgaagat gtcggttcat
    21601 ccataatcac gacatccgct gcatagctta aggctttagc aatttctacc agttgcctat
    21661 gtgccatcga catattgccg accatttcta gtgggtctag tggtatgccc cgttccgcga
    21721 ggagattctg gcaatctgcg agcatttttt tatcgttaat aatgccaaaa cgtcgcggtt
    21781 cattattggc ataaatattt tccgccacgg tcatattatt actcaggctc aattcctgaa
    21841 aaataatcgc aattcctaac tggcgtgaat gctgcggatt attaatggtg atagtttcac
    21901 cacgtagtgt tatcgttccc tgggttggcg gataaacacc ggccagtatt ttcattaatg
    21961 tcgatttacc ggcaccattc tcgcctaata aagtatgcac ccgcccttta cgtaaagaga
    22021 gggtaatatc ttttaatgct tgaacatgac caaatgtctt cgcaatatgc gaaacatcaa
    22081 gaataacatc cgtcataatg acctcggtgt cacaacaaaa cgccaataac gttttgttgt
    22141 gaggtgaaga tgtttactat ttacctgtat aaacgccggg ttgtaccggg atcatttttt
    22201 ctaccggttt accattgagg tgatcaacag cggcatcaat ggctttagca cccatttgat
    22261 cgggatattg ccgaatcacg gccgcaaacg ttttttcact gtcaacggca tcacgcgctt
    22321 ctttcatgcc atcaaaacca atgattttga tgttgtcgtt atgcgcagat tttgctgcga
    22381 taaccgctgc cagcgccgca tcatcaccaa agccaaacag accattcagg ttggcatttg
    22441 cctgcataat gttttgcgca gtcgttaacg cttcagcccg cgtaatacta ggctgttcag
    22501 caacaatttt aatatccggt gtatcgctta accctttctt aaaaccatca acgcgcgcaa
    22561 ccaccgattg tagtgccgga taagaaataa tggctacagt acctttacca ttcaaaagtt
    22621 tgcccattaa cttgcctgct tcaacgcctc ccgcatagtt atcggtcgca acatgcgata
    22681 cgaccggaac gccttccgca gcgacgtcga cggtgataac gggaataccg gccttatcgg
    22741 ctttaattat cgccgcctgg acgcctttcg aatcgaccgg agagataata atggcatcca
    22801 cttttttagt aataaaatcc tcaacatcag aaagttgttt gtttaaatcc tgattggcaa
    22861 atag
//
LOCUS       DADMJE010000055        22777 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.056, whole genome shotgun sequence.
ACCESSION   DADMJE010000055 DADMJE010000000
VERSION     DADMJE010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22777)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22777)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22777
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.056"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..454)
                     /locus_tag="JN001_001916"
     CDS             complement(<1..454)
                     /locus_tag="JN001_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000755097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9053165.1"
                     /translation="MKKVFAKSLLVAAMFSVAGSALAVQKDITVTANVDAALDMTQTD
                     NTALPKAVEMQYLPGQGLQSYQLMTKIWSNDVTKDVKMQLVSPAQLVQSLDASKIVPL
                     TVTWGGEEIKADAATTFTATKIFASDALTNGSLAKNLMFAQTTKGVLET"
     gene            complement(484..1200)
                     /locus_tag="JN001_001917"
                     /pseudo
     CDS             complement(484..1200)
                     /locus_tag="JN001_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225871.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
     gene            1496..2272
                     /gene="exuR"
                     /locus_tag="JN001_001918"
     CDS             1496..2272
                     /gene="exuR"
                     /locus_tag="JN001_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ExuR"
                     /protein_id="HAY9053166.1"
                     /translation="MEITEPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNV
                     SRTVVREAIIMLEVEGYVEVRKGSGIHVVSNQPRHQQAADNNMEFANYGPFELLQARQ
                     LIESNIAEFAATQVTKQDIMKLMAIQEQARGEQCFRDSEWDLQFHIQVALATQNSALA
                     AIVEKMWTQRSHNPYWKKLHEHIDSRTVDNWCDDHDQILKALIRKDPHAAKLAMWQHL
                     ENTKIMLFNETSDDFEFNADRYLFAENPVVHLDTATSGSK"
     gene            2617..3279
                     /locus_tag="JN001_001919"
     CDS             2617..3279
                     /locus_tag="JN001_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9053167.1"
                     /translation="MELLTQLLQALWAQDFETLANPSMIGMLYFVLFVILFLENGLLP
                     AAFLPGDSLLVLVGVLIAKGAMGYPQTILLLTVAASLGCWVSYIQGRWLGNTRTVQNW
                     LSHLPAHYHQRAHHLFHKHGLSALLIGRFIAFVRTLLPTIAGLSGLNNARFQFFNWMS
                     GLLWVLILTTLGYMLGKTPVFLKYEDQLMSCLMLLPVVLLVFGLAGSLVVLWKKKYGN
                     RG"
     gene            3283..3666
                     /gene="mzrA"
                     /locus_tag="JN001_001920"
     CDS             3283..3666
                     /gene="mzrA"
                     /locus_tag="JN001_001920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EnvZ/OmpR regulon moderator MzrA"
                     /protein_id="HAY9053168.1"
                     /translation="MQIPRMSLRQLAWSGTVLLLVGTLLLAWSAVRQQESTLAIRAVH
                     QGTTMPDGFSIWHHLDAHGIPFKSITPKNDTLLITFDSSDQSAAAKAVLDRTLPHGYI
                     IAQQDNNSQAMQWLTRLRDNSHRFG"
     gene            3813..4181
                     /locus_tag="JN001_001921"
     CDS             3813..4181
                     /locus_tag="JN001_001921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417568.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1090 domain-containing protein"
                     /protein_id="HAY9053169.1"
                     /translation="MKYRIALAVSLFALSAGSYATTLCQEKEQNILKEISYAEKHQNQ
                     NRIDGLNKALSEVRANCSDSQLRADHHKKIAKQKDEVAERQQDLAEAKQKGDADKIAK
                     RERKLAEAQEELKKLEARDY"
     gene            4219..4524
                     /locus_tag="JN001_001922"
     CDS             4219..4524
                     /locus_tag="JN001_001922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY9053170.1"
                     /translation="MSKEHTTEHLRAELKSLSDTLEEVLSSSGEKSKEELSKIRSKAE
                     QALKQSRYRLGETGDAIAKQTRVAAARADEYVRENPWTGVGIGAAIGVVLGVLLSRR"
     gene            4527..4931
                     /locus_tag="JN001_001923"
     CDS             4527..4931
                     /locus_tag="JN001_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053171.1"
                     /translation="MADTHHAQGPGKSVLGIGQRIVSIMVEMVETRLRLAVVELEEEK
                     ANLFQLLLMLGLTMLFAAFGLMSLMVLIIWAVDPQYRLNAMIATTVVLLLLALIGGIW
                     TLRKSRKSTLLRHTRHELANDRQLLEEESREQ"
     gene            4921..5220
                     /locus_tag="JN001_001924"
     CDS             4921..5220
                     /locus_tag="JN001_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053172.1"
                     /translation="MSSKVERERRKAQLLSQIQQQRLDLSASRREWLEATGAYDRRWN
                     MLLSLRSWALVGSSVMAIWTIRHPNMLVRWARRGFGVWSAWRLVKTTLKQQQLRG"
     gene            5316..5798
                     /locus_tag="JN001_001925"
     CDS             5316..5798
                     /locus_tag="JN001_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY9053173.1"
                     /translation="MILSIDSNDANTAPLHKKTISSLSGAVESMMKKLEDVGVLVARI
                     LMPILFITAGWGKITAYSGTQQYMEAMGVPGFMLPLVILLEFGGGLAILFGFLTRTTA
                     LFTAGFTLLTAFLFHSKFAEGVNSLMFMKNLTISGGFLLLAITGPGAYSIDRLLNKKW
                     "
     gene            5868..6771
                     /locus_tag="JN001_001926"
                     /pseudo
     CDS             5868..6771
                     /locus_tag="JN001_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708909.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
     gene            7064..7429
                     /locus_tag="JN001_001927"
     CDS             7064..7429
                     /locus_tag="JN001_001927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY9053174.1"
                     /translation="MDWYLKVLKNYVGFRGRARRKEYWMFILVNIIFTFVLGLLDKML
                     GWQRAGGEGILTTIYGILVFLPWWAVQFRRLHDTDRSAWWALLFLIPFIGWLIIIVFN
                     CQAGTPGENRFGPDPKLEP"
     gene            7671..8027
                     /locus_tag="JN001_001928"
     CDS             7671..8027
                     /locus_tag="JN001_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HAY9053175.1"
                     /translation="MQWYLAVLKNYVGFSGRARRKEYWMFTLINAIVGAIINVIQLIL
                     GLEFPFLSLIYLAATIIPVIALCVRRLHDTDRSGVWALLYLVPIIGWLVLFVFACLEG
                     NSGSNRYGNDPKFGSN"
     gene            complement(8078..8974)
                     /locus_tag="JN001_001929"
     CDS             complement(8078..8974)
                     /locus_tag="JN001_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9053176.1"
                     /translation="MAKERALTLEALRVMDAIDRRGSFAAAADELGRVPSALSYTMQK
                     LEEELDVVLFDRSGHRTKFTNVGRMLLERGRVLLEAADKLTTDAEALARGWETHLTIV
                     TEALVPTPAFFPLIDKLAAKANTQLAIITEVLAGAWERLEQGRADIVIAPDMHFRSSS
                     EINSRKLYTLMNVYVAAPDHPIHQEPEPLSEVTRVKYRGIAVADTARERPVLTVQLLD
                     KQPRLTVSTIEDKRQALLAGLGVATMPYPMVEKDIAEGRLRVVSPESTSEIDIIMAWR
                     RDSMGEAKSWCLREIPKLFSGK"
     gene            9079..9780
                     /locus_tag="JN001_001930"
     CDS             9079..9780
                     /locus_tag="JN001_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY9053177.1"
                     /translation="MITTRTARQCGQADYGWLQARYTFSFGHYFDPKLLGYASLRVLN
                     QEVLAPGAAFQPRTYPKVDILNVILDGEAEYRDSEGNHVQASAGEALLLSTQPGVSYS
                     EHNLSKDKPLTRMQLWLDACPQRENPLIQKLALNMGKQQLIASPEGTMGSLQLRQQVW
                     LHHIVLDKGESANFQLHGPRAYLQSIHGKFHALTHHEEKAALTCGDGAFIRDEANITL
                     VADSPLRALLIDLPV"
     gene            9803..9967
                     /locus_tag="JN001_001931"
     CDS             9803..9967
                     /locus_tag="JN001_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312016.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053178.1"
                     /translation="MSKKSAKKRQPVKPVVAKEPARTAKNFGYEEMLSELEAIVADAE
                     TRLAEDEATA"
     gene            complement(10101..11411)
                     /locus_tag="JN001_001932"
     CDS             complement(10101..11411)
                     /locus_tag="JN001_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine dehydratase subunit alpha family protein"
                     /protein_id="HAY9053179.1"
                     /translation="MFDSTLNPLWQRYILAVQEEVKPALGCTEPISLALAAAVAAAEL
                     EGPVERVEAWVSPNLMKNGLGVTVPGTGMVGLPIAAALGALGGNANAGLEVLKDATAQ
                     AIADAKALLAAGKVSVKIQEPCNEILFSRAKVWNGEKWACVTIVGGHTNIVHIETHNS
                     VVFTQQACVAEGEQESPLTVLSRTTLAEILKFVNEVPFAAIRFILDSAKLNCALSQEG
                     LSGKWGLHIGATLEKQCERGLLAKDLSSSIVIRTSAASDARMGGATLPAMSNSGSGNQ
                     GITATMPVVVVAEHFGADDERLARALMLSHLSAIYIHNQLPRLSALCAATTAAMGAAA
                     GMAWLVDGRYETISMAISSMIGDVSGMICDGASNSCAMKVSTSASAAWKAVLMALDDT
                     AVTGNEGIVAHDVEQSIANLCALASHSMQQTDRQIIEIMASKAR"
     gene            complement(11439..12771)
                     /locus_tag="JN001_001933"
                     /pseudo
     CDS             complement(11439..12771)
                     /locus_tag="JN001_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026203.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAAAP family serine/threonine permease"
     gene            complement(13045..14409)
                     /gene="tdcG"
                     /locus_tag="JN001_001934"
     CDS             complement(13045..14409)
                     /gene="tdcG"
                     /locus_tag="JN001_001934"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase"
                     /protein_id="HAY9053180.1"
                     /translation="MISAFDIFKIGIGPSSSHTVGPMNAGKSFIDRLESSGLLTATSH
                     IVVDLYGALSLTGKGHATDVAIIMGLAGNSPQDVVIDEIPAFIELVTRSGRLPVASGA
                     HIVDFPVAKNIIFHPEMLPRHENGMRITAWKGQEALLSKTYYSVGGGFIVEEEHFGLS
                     HDVETSVPYDFHSAGELLKMCDYNGLSISGLMMHNELALRSKAEIDAGFARIWQVMHD
                     GIERGMNTEGVLPGPLNVPRRAVALRRQLVSSDNISNDPMNVIDWINMYALAVSEENA
                     AGGRVVTAPTNGACGIIPAVLAYYDKFRRPVNERSIARYFLAAGAIGALYKMNASISG
                     AEVGCQGEIGVACSMAAAGLTELLGGSPAQVCNAAEIAMEHNLGLTCDPVAGQVQIPC
                     IERNAINAVKAVNAARMAMRRTSAPRVSLDKVIETMYETGKDMNDKYRETSRGGLAIK
                     VVCG"
     gene            complement(14481..14870)
                     /locus_tag="JN001_001935"
     CDS             complement(14481..14870)
                     /locus_tag="JN001_001935"
                     /EC_number="3.5.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312020.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enamine/imine deaminase"
                     /protein_id="HAY9053181.1"
                     /translation="MKKIIETQRAPGAIGPYVQGVDLGSMVFTSGQIPVCPQTGEIPA
                     DVQDQARLSLENVKAIVVAAGLSVGDIIKMTVFITDLNDFATINEVYKQFFDEHQATY
                     PTRSCVQVARLPKDVKLEIEAIAVRSA"
     gene            complement(14884..17178)
                     /gene="tdcE"
                     /locus_tag="JN001_001936"
     CDS             complement(14884..17178)
                     /gene="tdcE"
                     /locus_tag="JN001_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-ketobutyrate formate-lyase/pyruvate
                     formate-lyase"
                     /protein_id="HAY9053182.1"
                     /translation="MKVDIDTSDKLYADAWLGFKGTDWKNEINVRDFIQHNYTPYEGD
                     ESFLAEATPATTELWEKVMEGIRIENATHAPVDFDTNIATTITAHDAGYINQPLEKIV
                     GLQTDAPLKRALHPFGGINMIKSSFHAYGREMDSEFEYLFTDLRKTHNQGVFDVYSPD
                     MLRCRKSGVLTGLPDGYGRGRIIGDYRRVALYGISYLVRERELQFADLQSRLEKGEDL
                     EATIRLREELAEHRHALLQIQEMAAKYGFDISRPAQNAQEAVQWLYFAYLAAVKSQNG
                     GAMSLGRTASFLDIYIERDFEAGVLNEQQAQELIDHFIMKIRMVRFLRTPEFDSLFSG
                     DPIWATEVIGGMGLDGRTLVTKNSFRYLHTLHTMGPAPEPNLTILWSEELPIAFKKYA
                     AQVSIVTSSLQYENDDLMRTDFNSDDYAIACCVSPMVIGKQMQFFGARANLAKTLLYA
                     INGGVDEKLKIQVGPKTAPLMDDVLDYDKVMDSLDHFMDWLAVQYISALNIIHYMHDK
                     YSYEASLMALHDRDVYRTMACGIAGLSVATDSLSAIKYARVKPIRDENGLAVDFEIDG
                     EYPQYGNNDERVDSIACDLVERFMKKIKALPTYRNAVPTQSILTITSNVVYGQKTGNT
                     PDGRRAGTPFAPGANPMHGRDRKGAVASLTSVAKLPFTYAKDGISYTFSIVPAALGKE
                     DPVRKTNLVGLLDGYFHHEADVEGGQHLNVNIMNREMLLDAIEHPEKYPNLTIRVSGY
                     AVRFNALTREQQQDVISRTFTQAL"
     gene            complement(17212..18420)
                     /gene="tdcD"
                     /locus_tag="JN001_001937"
     CDS             complement(17212..18420)
                     /gene="tdcD"
                     /locus_tag="JN001_001937"
                     /EC_number="2.7.2.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417585.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propionate kinase"
                     /protein_id="HAY9053183.1"
                     /translation="MNEFPVVLVINCGSSSIKFSVLDASDCEVLMSGIADGINSENAF
                     LSVNGGEPAPLAHHSYEGALKAIAFELEKRNLNDSVALIGHRIAHGGSIFTESAIITD
                     EVIDNIRRVSPLAPLHNYANLSGIESAQQLFPGVTQVAVFDTSFHQTMAPEAYLYGLP
                     WKYYEELGVRRYGFHGTSHRYVSQRAHSLLNLAEDDSGLVVAHLGNGASICAVRNGQS
                     VDTSMGMTPLEGLMMGTRSGDVDFGAMSWVASQTNQSLGDLERVVNKESGLLGISGLS
                     SDLRVLEKAWHEGHERAQLAIKTFVHRIARHIAGHAASLRRLDGIIFTGGIGENSSLI
                     RRLVMEHLAVLGVEIDTEMNNRSNSCGERIVSSENARVICAVIPTNEEKMIALDAIHL
                     GKVNAPAEFA"
     gene            complement(18446..19777)
                     /gene="tdcC"
                     /locus_tag="JN001_001938"
     CDS             complement(18446..19777)
                     /gene="tdcC"
                     /locus_tag="JN001_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine transporter TdcC"
                     /protein_id="HAY9053184.1"
                     /translation="MSTSDSIVSSQTKQSSWRKSDTTWTLGLFGTAIGAGVLFFPIRA
                     GFGGLIPILLMLVLAYPIAFYCHRALARLCLSGSNPSGNITETVEEHFGKTGGVVITF
                     LYFFAICPLLWIYGVTITNTFMTFWENQLGFAPLNRGFVALFLLLLMAFVIWFGKDLM
                     VKVMSYLVWPFIASLVLISLSLIPYWNSAVIDQVDLGSLSLTGHDGILITVWLGISIM
                     VFSFNFSPIVSSFVVSKREEYEKDFGRDFTERKCSQIISRASMLMVAVVMFFAFSCLF
                     TLSPANMAEAKAQNIPVLSYLANHFASMTGTKTTFAITLEYAASIIALVAIFKSFFGH
                     YLGTLEGLNGLILKFGYKGDKTKVSLGKLNTISMIFIMGSTWVVAYANPNILDLIEAM
                     GAPIIASLLCLLPMYAIRKAPSLAKYRGRLDNVFVTVIGLLTILNIVYKLF"
     gene            complement(19799..20788)
                     /gene="tdcB"
                     /locus_tag="JN001_001939"
     CDS             complement(19799..20788)
                     /gene="tdcB"
                     /locus_tag="JN001_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional threonine ammonia-lyase/L-serine
                     ammonia-lyase TdcB"
                     /protein_id="HAY9053185.1"
                     /translation="MHITYDLPVAIDDIIEAKQRLAGRIYKTGMPRSNYFSERCKGEI
                     FLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGK
                     VVMPKGAPKSKVAATCDYSAEVVLHGDNFNDTIAKVSEIVEMEGRIFIPPYDDPKVIA
                     GQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAVAIKSINPTIRVIGVQSENVHGMAA
                     SFHSGEITTHRTTGTLADGCDVSRPGNLTYEIVRELVDDIVLVSEDEIRNSMIALIQR
                     NKVVTEGAGALACAALLSGKLDQYIQNRKTVSIISGGNIDLSRVSQITGFVDA"
     gene            complement(20887..21825)
                     /gene="tdcA"
                     /locus_tag="JN001_001940"
     CDS             complement(20887..21825)
                     /gene="tdcA"
                     /locus_tag="JN001_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TdcA"
                     /protein_id="HAY9053186.1"
                     /translation="MSTILLPKTQHLVVFQEVIRSGSIGSAAKELGLTQPAVSKIIND
                     IEDYFGVELVVRKNTGVTLTPAGQLLLSRSESITREMKNMVNEISGMSSEAVVEVSFG
                     FPSLIGFTFMSGMINKFKEVFPKAQVSMYEAQLSSFLPAIRDGRLDFAIGTLSAEMKL
                     QDLHVEPLFESEFVLVASKSRTCTGTTTLESLKNEQWVLPQTNMGYYSELLTTLQRNG
                     ISIENIVKTDSVVTIYNLVLNADFLTVIPCDMTSPFGSNQFITIPVEETLPVAQYAAV
                     WSKNYRIKKAASVLVELAKEYSSYNGCRRRLLIEVG"
     gene            22014..22358
                     /gene="tdcR"
                     /locus_tag="JN001_001941"
     CDS             22014..22358
                     /gene="tdcR"
                     /locus_tag="JN001_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TdcR"
                     /protein_id="HAY9053187.1"
                     /translation="MTGITIFYGDNIIRYVVNTKKGLRPYFKQLPDNYQAKFELNLMS
                     KFSNFIINKPFSAINTAARHIFSRYLLENKHLFYQYFKISNTGIDHLEQLINVNFFSS
                     DRTSFCECNRFP"
BASE COUNT         5970 a         5763 c         5310 g         5734 t
ORIGIN      
        1 ctgtctccag aacacctttg gtggtttgag caaacatcag gtttttagcc agagaaccgt
       61 tagttaacgc atcggaagca aagattttgg ttgcggtaaa agtggttgcc gcatcagctt
      121 taatttcttc accgccccag gttactgtca gcggaacaat cttgctagca tccaggcttt
      181 gaaccagttg cgccggggaa actaactgca tttttacatc tttggtaacg tcgttagacc
      241 agattttggt catcaactgg taagattgca gaccctgccc cggcagatat tgcatttcta
      301 ctgctttcgg caacgcggtg ttatcggtct gtgtcatatc cagagcggca tcaacgttgg
      361 ccgttacagt aatatccttt tgtactgcca atgcggagcc tgcaacagaa aacatcgctg
      421 cgaccagaag agattttgca aatacctttt tcattactat tccttcgttt attacaatga
      481 taattaatgg accgccagtt caaactcgcc attatctttg gtgatccagt tattatattt
      541 gacaacgatt ttgtcgtagc cagatatgct ttcaagattt ctttcctgac cagggaagat
      601 gtttttattt acggtctgta tcttacaatt ttctttgcta ttatttttac aataagcgat
      661 cgttaaaatc tttaagcgtt gattccctgc attaactaat ttttgggcag catttacttc
      721 taacttagca ataggttgct gaggtggaac actaacaaca atcccccaaa ttaagctaac
      781 agttaactgc atagagaaat cttttttatc tgtggcaacg tcatcaatac tgggaaccgc
      841 ttcaaattta acgcgttaat ttttttcttt ttgctctggt tccattgcaa caaagcgcac
      901 agttttgcta ctaccggctg gtaaagcgaa tttaggtggc ataacaacca gatgatttgc
      961 atcaccggat ttaatctcaa cttcattttc ctgaggcgtc gatggattat cgatacggaa
     1021 tactgtcgcc ttgatgtact gaacttcatt acttttagat attacgcgaa cgttgccttc
     1081 atcctgacta ttaatggaaa cagccatagg ataaacagtc atatttgact gtgccaaaaa
     1141 aggagcgaac acgaataaaa gcggcgcaag ccgtgataag agattaattt tcgccaccat
     1201 ataaatttga tcttacaata ttgtttccaa aaagttggtg tattagagat gtagatttat
     1261 tgtaagtcaa tataaaaaag catttttagt taatattaaa tttaaaggct gggaattaac
     1321 ttgctgaaat ttagtagctt tcacaatgac gatacttatt ttttaggaat ttataaatat
     1381 tcacaatatt aattcaatac attaattcaa tcaccaaatt tatatatgac caatggcata
     1441 cccatgaata aagtggtatg ataacttcgt ccgcattcca ctccgggaga cgcatatgga
     1501 aatcactgaa ccacgccgtt tgtatcaaca acttgccgct gacctgaaag agcgcattga
     1561 acagggcgtc tatctggtgg gtgataaact gcctgccgaa cgctttattg ccgatgaaaa
     1621 gaacgtcagc cgaacggtag ttcgtgaagc catcatcatg ctggaagttg aaggctatgt
     1681 ggaggtgcgt aaaggttcag gtattcatgt ggtttccaac cagccgcgcc atcagcaggc
     1741 ggctgacaat aatatggaat tcgccaatta cggtccgttt gagttgcttc aggctcgcca
     1801 gctcatcgaa agtaatattg ccgagttcgc ggcaactcag gtaacgaaac aagacatcat
     1861 gaaactgatg gccattcagg aacaggcgcg cggcgaacaa tgcttccgtg attccgagtg
     1921 ggatttacag ttccacattc aggtagccct ggcgacgcag aactccgccc tggcggccat
     1981 cgttgaaaaa atgtggaccc agcgtagcca taacccgtac tggaaaaaac tacacgaaca
     2041 cattgattcc cgtaccgttg ataactggtg tgatgaccac gatcaaattc tcaaggcgtt
     2101 aattcgcaaa gatccccatg ctgctaagct ggcaatgtgg cagcatctgg aaaacaccaa
     2161 aatcatgtta tttaacgaaa ccagcgacga tttcgagttc aatgccgacc gctatctatt
     2221 cgccgaaaac ccggtagtgc atctcgatac ggccaccagt ggcagtaaat gaaactcctg
     2281 tccgacaggc gctgcgacgc gcctgttcgc ttcgtcggta agcgaaaagt ataaagtgtc
     2341 agcctgtgta aatcctctcg ccaccctccc ctgcattcag caaaatcaga ctccacggac
     2401 atgtaatttt gataacgaac aacgttgacc tttgttacaa ttagattcaa tttgaattta
     2461 tgtttttgaa tgctttctta tctcacgatt taacagggaa tagttcaggc tgtgttgatg
     2521 tatcaaaccc gcagaacata ccaaaacagc aataacattg cggtagtgca tcttttaaaa
     2581 ccagcgtggc gttaaccgat tcaccaggaa taatgaatgg aacttttgac ccaattgctg
     2641 caagccctgt gggcgcagga ttttgaaacc ctggccaatc catcgatgat tggcatgttg
     2701 tattttgtct tgtttgtaat tttgttcctt gaaaacggct tgcttccagc ggccttttta
     2761 ccgggcgaca gtttactggt attggtcggc gtgttgattg cgaaaggcgc gatgggttac
     2821 ccgcaaacga ttctgctgct gaccgttgcc gccagcctcg gctgctgggt cagctatatt
     2881 caggggcgat ggctgggcaa tacccgcacc gtacaaaact ggctatctca tttacccgcg
     2941 cattatcatc aacgcgcaca ccatcttttt cataaacacg gtttatcggc gctgttaatt
     3001 ggtcgcttta ttgcgtttgt cagaacactg ctgccgacga ttgccgggtt atcagggctg
     3061 aataacgcgc gctttcagtt tttcaactgg atgagcggtc tgctgtgggt attgatcctg
     3121 acaactctgg gttacatgct cggcaaaacg ccggtatttt taaagtacga ggaccagctg
     3181 atgtcatgcc tgatgctgct cccggtggtg ctgctggtgt ttggcctggc aggttctctg
     3241 gtcgtgttat ggaaaaagaa atatggaaat cgggggtaag ggatgcaaat acctcgcatg
     3301 tcgcttcgcc agctagcctg gtccggcact gttttacttc tggtcggcac gctgttgctg
     3361 gcctggtccg cggttcgcca gcaagagtct acgctggcga ttcgtgccgt tcatcaaggc
     3421 acaacgatgc cagacggttt ttcgatctgg catcaccttg acgctcatgg cattcctttc
     3481 aaaagtatca cccccaaaaa cgacactctg ttaattacat ttgactccag cgaccagagc
     3541 gccgccgcaa aagcggtcct cgacagaaca ttgccccatg gctacatcat tgcgcagcag
     3601 gacaataaca gtcaggctat gcagtggctg acccggttac gggataactc tcatcgcttc
     3661 ggataacttc ctgttatccg aaacatatca ctcactttgg tgatttcacc gtaactgtct
     3721 atgattaatg aggcggtggt taacactacc gcttcgttgt ctggacaatc gttcctttgt
     3781 aacaggtccg aatcacaatg gaaggttcaa gaatgaaata ccgcatcgct ttagctgttt
     3841 ctctctttgc tcttagtgcc ggtagttatg ccactaccct gtgtcaggaa aaggagcaaa
     3901 atatccttaa ggagatcagc tatgccgaaa aacaccaaaa ccagaatcgt attgacggtc
     3961 tgaataaagc cctgagtgaa gtccgggcca actgttcaga tagccagctg cgtgccgatc
     4021 atcacaagaa aatcgcaaag cagaaagatg aggtggcgga acgccagcaa gatttagccg
     4081 aggcgaagca aaaaggcgat gccgataaga ttgccaaacg cgaacggaaa ctggcagaag
     4141 cgcaggaaga gctgaaaaag ctggaagcgc gcgactacta actcacaata gtcactactt
     4201 actcacctgg agaaaactat gtcgaaagaa cacactacgg aacatctgcg tgctgagttg
     4261 aaatcccttt ccgatacgct ggaagaggtg cttagctcat ctggcgagaa gtcgaaagaa
     4321 gagttgagta agattcgtag caaagcggag caggcactga aacagagccg ttatcgcctg
     4381 ggtgaaaccg gtgatgccat cgccaaacaa acccgtgtcg cggcggcgcg tgctgatgag
     4441 tatgtgcgtg aaaatccgtg gaccggcgtg ggaattggcg ctgcaatcgg tgtagtgctc
     4501 ggcgttctgc tgtcgcgtcg ttaattatgg cggacactca tcacgcgcaa gggcccggta
     4561 aaagcgttct gggcatcggg cagcgaattg tttccatcat ggttgaaatg gtggaaacac
     4621 gtctgcggct ggcggtggtg gagctggaag aggaaaaagc taatctcttt caacttttac
     4681 tgatgctggg cctgacgatg cttttcgctg catttggtct tatgagcctg atggtgctaa
     4741 ttatttgggc ggttgatccg caatatcgcc tgaatgcgat gattgccacc accgtggtgt
     4801 tgctgctact ggcactgatt ggcggtatct ggacgttacg taaatcgcgt aaatccacct
     4861 tgctgcgcca tacacgccat gagctggcaa acgatcggca actgctcgag gaggagtccc
     4921 gtgagcagta aagtcgaacg tgaacgacgt aaggcgcaac tgcttagcca gatccagcaa
     4981 caacggctgg atctttccgc cagtcgtcgt gaatggctgg aggcaacagg cgcttacgat
     5041 cgtcgctgga atatgctgct aagtctgcgc tcctgggcgc tggttggcag tagcgtgatg
     5101 gcgatctgga cgattcgcca tcctaatatg ctggtccgct gggccagacg cggttttggc
     5161 gtatggagcg cctggcgtct ggttaaaacg accctcaagc agcaacagct tcgcggttaa
     5221 cttccctctg gccggagcca ttccggccct atccctcaaa ttttttgaag atttttgaca
     5281 gttttccttg ctaacaatca tcattcacca cgtttatgat tctctccatc gacagcaacg
     5341 acgctaatac cgcgcccttg cacaaaaaaa caatcagcag cctgagtggc gcagtggaga
     5401 gtatgatgaa aaaattagaa gatgttggtg tactggtagc gcgcatttta atgccgattc
     5461 tgtttattac cgcaggctgg ggaaaaatca ccgcttactc tggtacccaa caatatatgg
     5521 aagcaatggg tgtcccgggt tttatgctgc cgctggtgat tctgctcgag ttcggtggtg
     5581 gtctggcaat cctgttcggt ttcctgactc gcaccacagc cctgtttact gcgggcttta
     5641 cgctgctgac ggcattttta tttcacagca agtttgctga aggcgtcaac tcgctgatgt
     5701 tcatgaaaaa cctgacaatt tctggcggat tcctgctgct ggcaattacc ggtccgggcg
     5761 cgtatagcat cgaccgcctg ctgaataaaa agtggtaagc acgcgctata cttaacgata
     5821 aaaaacgagg aggaagctcc tcgtttttgc tattggagga gagaaaaatg gggcaactga
     5881 ttgacggcgt ctggcatgac acctggcccc actggcacag gcggttttat cgcagagaaa
     5941 gatcgttatc atctctatgt ttcactcgcc tgcccgtggg cgcaccgcac gctgatcatg
     6001 cgcaaactca aaggactgga accgtttatt tccgtttccg tagtgaaccc gctgatgctg
     6061 gaaaacggct ggacctttga tgacagtttt ccgggagcaa ccggagatac gctctatcaa
     6121 catgaatttc tgtatcagct ttatctccac gccgatccac actacagcgg acgagttact
     6181 gttcccgtgc tgtgggacaa aaagaaccac accattgtca gcaacgaatc agcagaaatc
     6241 atccgcatgt tcaataccgc gtttgatgcg ctgggcgcaa aagcgggtga ttactaccca
     6301 ccagccctgc aaacgaaaat tgacgaactt aacggctgga tttatgacac cgttaacaac
     6361 ggcgtgtata aagctggttt tgccaccagc cagcaagcct acgacgaggc ggtggcgaaa
     6421 gtgtttgaat cgctggcgcg actggagcag attttaggcc agcatcgtta cctgaccggc
     6481 aaccagctaa ccgaagccga tattcgcctg tggactacgc tggtgcgttt tgatccagtg
     6541 tatgtgaccc acttcaagtg tgataagcac cgcatcagcg attacctgaa tctgtatggc
     6601 ttcctgcgcg atatctacca gatgccgggg atcgccgaaa ctgtcaattt cgatcacatc
     6661 cgtaatcatt acttccgcag ccataagacc atcaacccta cggggattat ttcaattggt
     6721 ccgtggcagg atctcgatga accgcatgga cgagatgttc gcttcggtta aaaaaaggca
     6781 ccttacgagg tgcctctgat aattagctaa gtgcatgttg ttcatgtcgg atgcggcgtg
     6841 aacgccttat caaacctaca aaacgtttat attcaatatg ttaaaatgac cgcgtaggcc
     6901 agataagcgt agcgcatctg gcgattttgc gcttgtcatc agtcttagcg caccttcacg
     6961 gcactttatt aattccttga acgaatattt actgccattt cattcacgtc tattcttaat
     7021 ttgctgcttt aaaaacaagt gattgagcaa aattgaggca aaaatggact ggtatctgaa
     7081 agtactaaaa aattatgtcg gtttccgggg tcgtgcgcgg cgcaaagagt actggatgtt
     7141 tattctggtc aacatcatct ttacgttcgt gctggggctg ctggataaaa tgttaggctg
     7201 gcaacgcgcc ggtggcgaag gcatcctgac gacaatctac ggtattctgg tgtttttacc
     7261 gtggtgggcg gttcagttcc gccgcctgca cgacaccgac cgctcggcgt ggtgggcact
     7321 gttgttctta atcccgttta tcggctggct tattatcatc gtctttaact gccaggcggg
     7381 tacgccaggc gaaaaccgct ttggaccaga tccgaaactg gaaccttaaa acaaatctgc
     7441 tcgccggatg tctgactcat ccggctttta tcatcatgtt gatgaatgaa taatttacta
     7501 atgtttattt aaaatatttc aatgtcgtta tataaattac ctataaaaaa caaccatgta
     7561 tttatcttaa atatcaaaac ctttataaca tccgaaaaag aaagatacga atagcattta
     7621 cacaataccc ggaatagact ttcgtcactt ttaattaaag ggatgttttt atgcagtggt
     7681 atttagccgt attaaaaaat tatgttggtt tctctggtcg cgcacgtcgt aaagagtact
     7741 ggatgtttac tctgattaac gccatcgtcg gcgctattat caatgtcatt caattgattt
     7801 taggtttaga gtttccattc ctttctctca tttacctggc agcaacaatc attccggtca
     7861 ttgctctgtg tgttcgtcgt ctgcacgata ctgaccgttc aggtgtgtgg gcgcttctct
     7921 atctggtacc gatcattggc tggttagttc tgtttgtatt tgcctgttta gaaggcaatt
     7981 ctggcagcaa tcgttacgga aacgatccta agtttggttc aaattaatct tagaattggg
     8041 gcgatatttc gccccttttt attaacaata ataaatatta ttttccgcta aaaagtttgg
     8101 gaatttcccg cagacaccag gatttcgctt cccccatact gtcacgacgc caggccataa
     8161 taatatcgat ctcgctggtc gattccgggc tgacgacacg caaccgccct tccgcaatat
     8221 ctttttcgac catcggatac ggcatcgtcg ccacgccaag ccccgccagt aatgcctgac
     8281 gtttatcttc aatcgtgctc accgttaagc gcggctgttt gtccagcagc tgtacggtca
     8341 acaccgggcg ctcacgagcg gtatccgcta ccgcaattcc acgatatttc acgcgcgtca
     8401 cttcagataa cggttccggc tcctgatgaa tcgggtgatc aggcgcggca acgtagacgt
     8461 tcattaaggt atagagcttg cgcgagttga tctccgacga ggaacgaaaa tgcatatccg
     8521 gcgcgataac gatatccgcc cgcccctgct ccagtcgttc ccacgccccc gccagcactt
     8581 cggtgatgat tgccagttgg gtattggctt ttgccgccag tttgtcgatt aacgggaaaa
     8641 aggcaggtgt cggtaccagc gcctcggtca caatggtgag atgcgtttcc caaccgcgcg
     8701 cgagggcttc cgcatcggta gtcagtttat ctgctgcttc cagcaaaacg cgccctcgct
     8761 ccagcaacat cctcccgaca ttggtgaatt tggtgcgatg gcccgagcgg tcaaacagca
     8821 ccacatccag ctcttcttcc agtttttgca tggtgtagct aagtgcggaa ggcacgcgtc
     8881 ccagctcatc cgccgccgcc gcaaaactgc cccggcgatc gatcgcatcc ataacccgta
     8941 gtgcttccag cgttaatgcc ctttctttgg ccatttcgtt ctcattcagg aaatttgaac
     9001 ataccgggca gaatatctgg ctaacaatgt agcgtccagc cccttaccat aaaaggaagt
     9061 aaagagaggt caagaattat gattactacc cgaactgcca ggcagtgtgg acaagcagac
     9121 tacggatggt tgcaggcccg gtatactttt tcctttggac actacttcga cccgaaattg
     9181 ttaggctatg cctccctgcg tgtgcttaac caggaagtgc tggccccagg tgccgccttt
     9241 cagccgcgaa cctatcccaa agtcgatatt ttaaatgtga ttctggatgg agaagcagag
     9301 tatcgcgaca gcgaaggcaa tcatgttcag gccagcgccg gtgaggcgtt gctgctctct
     9361 acccagccgg gtgtcagcta cagcgaacac aatctcagca aagacaaacc gttaacacga
     9421 atgcagcttt ggctggacgc ctgcccgcag cgagagaatc cgctgattca aaaactggcg
     9481 cttaatatgg gcaagcagca attaatcgcc tcgccagagg gtacgatggg aagcctgcaa
     9541 ttacgccagc aagtgtggct gcaccatatc gtgctcgaca aaggcgaaag tgcgaatttc
     9601 cagttgcatg ggccacgcgc gtatttgcaa tcgattcacg ggaaatttca tgcgcttacg
     9661 catcatgaag agaaagcggc gctgacctgc ggtgatgggg cgtttattcg tgacgaggct
     9721 aacattacgc tggttgccga ttccccactg cgcgctttgc tgatagattt gcctgtctag
     9781 ttgtttttac agggagatga tgatgagtaa aaaatcggcc aaaaagcgcc agccagtgaa
     9841 gcccgtggtg gcgaaagaac ctgctcgcac cgccaaaaat tttggctatg aagagatgtt
     9901 gagcgagctg gaagccatcg tcgcggatgc tgaaacgcgt ttagccgagg atgaagctac
     9961 cgcgtaaaga caggttgccg gatgcggcga aaacgcctta tccggcctac aaaatccaac
    10021 aacattaacg aattaaacaa cccgtaggcc ggataaggtg cgccagcatc gcatccggca
    10081 caatactcaa aacctggcgt ttatctggcc ttgctcgcca taatctcgat aatctgccga
    10141 tccgtttgct gcatcgaatg gcttgctaac gcacacaggt tggcaatcga ctgctcaaca
    10201 tcatgcgcca cgatcccttc attgccggtc acggcggtat catccagcgc cattaacacc
    10261 gctttccacg cagccgaagc actggtcgaa accttcatcg cgcagctgtt cgacgcacca
    10321 tcgcaaatca tgccgctgac atcgccgatc atactgctga tcgccatcga gatagtttca
    10381 taacgcccat ccaccagcca tgccatcccg gcggcggccc ccattgctgc ggtcgttgcg
    10441 gcacaaagtg cagacaaacg cggtaactgg ttatggatgt aaattgcgct caaatgagaa
    10501 agcatcagcg cacgcgccag tcgttcatca tccgctccga agtgttctgc tacaaccacc
    10561 acaggcattg ttgcggtgat cccctggtta cccgagccgg agttactcat agccggaagc
    10621 gtagcgccgc ccatacgcgc atcggatgcc gcgctggtac gaatcacaat ggatgaagag
    10681 agatctttcg ccagcaaacc gcgctcgcac tgtttttcca gcgtcgcgcc aatatgcagc
    10741 ccccacttac cgctcaaacc ttcctgcgat aacgcacaat ttagcttcgc ggaatcgaga
    10801 ataaagcgga tcgccgcaaa cgggacttca ttgacgaact tcaggatctc agccagcgtc
    10861 gttctggaaa gcaccgtcag cggagactct tgctcgccct ctgccacaca cgcctgctgg
    10921 gtaaacacca cactattgtg cgtctcaata tgcacaatgt tggtatgccc gccgacgatg
    10981 gtgacacacg cccacttctc accgttccag actttggcgc gtgagaagag gatttcattg
    11041 caaggttcct ggatcttaac ggagactttc cccgccgcca gcagtgcttt ggcatcggca
    11101 attgcctgcg cagttgcgtc tttcagcact tccagcccgg cgttggcatt tccacctaac
    11161 gcccccagcg ccgccgcaat cggcagcccc accattcccg tgccgggaac ggtgacgccc
    11221 agaccgttct tcatcagatt tggcgaaacc caggcttcta cacgttcaac cggaccttcc
    11281 agttctgccg cagcaaccgc cgccgccagc gccagtgaaa tcggttcagt acatcccagc
    11341 gccggtttta cttcctcctg aacggcgagg atgtaacgct gccataacgg atttaaagtc
    11401 gaatcaaaca tattaaaaac cttaaaattt caggtaaatc aagaaaatgc caggaacgga
    11461 gaaacacaaa gcaacaaacc agtgacgata atcaggtaca gagacatccc tttgtatttg
    11521 tgcaatgccg gtactttgta aaccagccac gccgggatca ggcaccctac catgccgaaa
    11581 atcgggctac agatagaggt gaagctcaac accggtgcgt tcagtacgat ggcgctccag
    11641 gccagcaaaa tggcgaaaat catgatgccg cgctgaacaa gattttcgtt aatcttctcg
    11701 gcaggcatct tgcgacgcag gatgttcatt acgatccctt gcgttgcttc gcgaaagcct
    11761 aaatagacgc caaagaatgc agtcatgaca gcaaagatat tgagaatgac gctgaccact
    11821 ttcacccacg ctgcgccgtc accgctaata aactgtgcgg caatcgccag cgcggaaata
    11881 ttctgctcgt aggcttttac cgcttcgtca tgtcccatcg ccagcgtgaa cgacacggcg
    11941 tagaaaaaga cggtgacaaa taaaatgcca aacgcgatat tcattgcccg caatgcttta
    12001 tgccgcgcca cttcaattga tttttcccgc gagcgataag agatcaccat cgggcttaac
    12061 gtctggataa acagaatcga cgtcagggta aacggcagcg taataatggc gtttttcacc
    12121 agcagcccca gcggcggtag cgaaccgacg ttatacagat gccacattcc caccatcgac
    12181 acgcccagcg cagcgactac cagcagcttg gtcagcacca tgccggtcga aattttgaat
    12241 aacaatttct cgccgcgtga agagatcgcc accagaatgc aaatcagtac cagaccataa
    12301 aagggactgt ctgacagcac cccttccgtc acgccgaagg tatgcagata ggaagcacta
    12361 tcgttggtga tggcggtgga atagacgaac atccaaatca ccagcattac gaaatagagc
    12421 gcacctaaca ggatgcccca gtttttacct aaataaccgc taatgacact cgggtaatct
    12481 ttacattctg tgtgattctg ccagcgtatt aataaacaac cgctgaaaca gatacattgc
    12541 cgggtaacca atcaccgatg agagcaaaaa tacccacaat cccatcaaac cgacctgcac
    12601 cgggagaaaa acaatccccg cgccaatcgc catcccgata ctcataatca cccagccggt
    12661 gtcagtactg tcgaatttga tcgcttctcg ccactcgctc tcactcattc cagcacgacc
    12721 cgccggggtc gaagcgtctg caatgacgcc tttattcgat gcaatttcca taatttctcg
    12781 ctcaatattt tgtagggctt attatttttt tccgagccgc atcaaggcga tatgcggtct
    12841 acgtttttgc aggcgagtta ttagaataaa gaaatgatac gcgcgaggtc agagaaaatc
    12901 ttcacaatca agactttgaa ataacggaga tggataagaa ttttctacta aattaatcgc
    12961 aagagaatat tcattctcta tttgcggcag atcacaaaaa aaggtgcaca tttgtgcacc
    13021 caaggatgaa agctgacagc aatgtcagcc gcagaccact ttaatggcca gtcctccgcg
    13081 tgatgtttcg cggtatttat cgttcatatc tttgccggtt tcatacatcg tctcgatcac
    13141 tttatcgagt gaaacacgcg gtgccgaggt gcggcgcatc gccatccgcg cggcgtttac
    13201 tgctttcacg gcattaatgg cattacgttc aatgcacggg atttgtacct gtccggcaac
    13261 cggatcgcag gtcagcccaa ggttatgctc catcgcgatt tccgccgcat tgcatacctg
    13321 cgccggactg ccgcccagta gttcagttaa ccctgccgcc gccattgaac aggccacgcc
    13381 aatctccccc tgacagccga cctccgcgcc agagatggag gcgttcattt tatacagcgc
    13441 gccaatagcc cccgctgcca gaaaatagcg ggcaattgac cgctcgttta ccggacgacg
    13501 gaacttatcg taataagcca gcactgccgg aataatgccg cacgcaccgt tagtcggtgc
    13561 cgttaccacg cgcccgccag ctgcgttttc ttcactaacc gccagcgcgt acatgttgat
    13621 ccagtcgatg acattcatcg gatcgttaga gatgttatcg ctagaaacca gctgacgacg
    13681 cagcgctacg gcacgacgcg gcacattgag cggaccaggc agcacgcctt cagtgttcat
    13741 cccgcgttca ataccgtcat gcatcacttg ccagatacgg gcaaaccctg cgtcaatttc
    13801 cgctttgctg cgcagcgcca gctcgttgtg catcatcagg ccagatatag acaggccgtt
    13861 gtaatcacac attttcagca gttcacctgc tgagtggaaa tcgtaaggta cggacgtttc
    13921 gacatcgtgc gacaggccga agtgttcttc ttcgacaata aacccgccgc cgacagagta
    13981 ataggtttta cttaatagcg cttcctgtcc cttccaggca gtgatccgca ttccgttctc
    14041 atggcgaggc aacatttcgg gatggaagat aatgttcttt gctacaggaa aatcaacaat
    14101 atgcgcacca gatgccactg gcagccgccc gctgcgcgtt actaactcta taaatgcagg
    14161 gatctcatca atgacaacat cctgcggact gtttcctgcc agtcccatga taatggcgac
    14221 atccgtggca tggcctttgc ccgtcagtga caacgcccca tacagatcga ccacaatatg
    14281 gctcgtcgcg gttaataagc cgctactttc cagccgatca ataaaacttt ttccggcatt
    14341 cattggcccc acggtatgcg aactggaggg accaatccca attttgaaaa tatcgaatgc
    14401 actaatcata tccacaccct cggattgccg ttcagtgaag tggagcggaa cgaccttgcg
    14461 accgtcccgc tcacgaggct ttacgcacta cgtactgcga tagcttcaat ttccagcttc
    14521 acatctttcg gcaaacgcgc aacctgcaca cagctccggg tcgggtaggt cgcctgatgc
    14581 tcatcgaaga actgcttata gacttcattg atggtggcaa aatcattcag atcggtgatg
    14641 aacacggtca tcttgatgat atcgcccacg ctcagcccgg cagcaaccac gatcgctttg
    14701 acgttttcga ggcttaaacg cgcctgatct tgcacatcag ccgggatctc accggtctgc
    14761 gggcaaaccg gaatttgccc ggaggtgaag accatgctgc ctaaatcaac gccctgaaca
    14821 taagggccga ttgcgcctgg ggcacgttgc gtttcgataa tctttttcat acatcctccg
    14881 gcgtcagagc gcctgggtaa aagtacgtga aataacatcc tgttgctgtt cacgggtcag
    14941 tgcgttgaag cgcacggcgt agccagagac acggattgtc aggttaggat atttttccgg
    15001 gtgctcgatg gcatccagca gcatttcccg attcattatg ttgacgttga ggtgttgacc
    15061 gccttcgaca tccgcttcgt ggtggaaata cccatccagc aggccgacaa ggttggtttt
    15121 acgtactgga tcttctttgc ccagcgccgc aggaacgatt gagaaggtgt acgagatccc
    15181 atctttggcg taggtgaacg gcagtttcgc caccgacgtc aatgaggcca cggcaccttt
    15241 gcggtcacga ccatgcatcg ggttagcgcc cggcgcgaac ggtgttccgg cgcgacgacc
    15301 gtccggcgta ttaccggttt tctggccgta caccacgtta gaagtgatag tcagaatcga
    15361 ctgggtaggg acggcgttgc gataggttgg cagcgcttta attttcttca taaagcgttc
    15421 aaccaggtcg caggcaatgc tgtctacgcg ctcgtcgttg ttgccgtact gcggatattc
    15481 accgtcgatt tcaaagtcca ccgccaggcc gttttcgtca cggattggtt tcacgcgggc
    15541 atatttgatg gcagacaggg agtccgtcgc caccgacagg cccgcgatgc cgcatgccat
    15601 agtgcgatag acatcacgat cgtgcagcgc catcagcgaa gcttcgtagc tgtacttgtc
    15661 gtgcatgtag tgaatgatat tcagcgcgct gatgtactgc accgccagcc agtccatgaa
    15721 gtgatcgagg ctgtccatca ctttgtcgta atccagcacg tcgtccatca gcggtgctgt
    15781 tttcggcccg acctgaatct tcagcttctc gtccaccccg ccgttaattg cgtagagcag
    15841 cgttttcgcc aggttagcgc gtgcaccaaa gaactgcatt tgcttaccaa tcaccattgg
    15901 gctgacgcag caggcaatcg cgtaatcgtc gctgttgaag tcagtacgca tcagatcgtc
    15961 attttcatac tgcaaggaag aggtgacgat cgacacctgc gcggcatatt ttttgaaggc
    16021 aatcggtaat tcttccgacc aaagaatggt caggttaggt tccggtgccg gccccatagt
    16081 gtgcagggtg tgcaaatagc ggaaggagtt tttggtcacc agcgtacgac cgtccagccc
    16141 catcccgccg atcacttccg tcgcccagat tgggtcgccg gagaacagcg aatcaaattc
    16201 cggtgtacgc aggaagcgta ccatacggat cttcatgatg aagtgatcga tcagttcctg
    16261 tgcctgctgc tcattgagta cgccagcttc aaagtcgcgc tcaatgtaga tatcgaggaa
    16321 cgatgccgtg cggcccagcg acatcgcgcc gccattttgc gatttcactg ccgccagata
    16381 agcgaagtag agccactgca ccgcttcttg cgcattctgc gccgggcgag agatatcaaa
    16441 gccatatttc gccgccattt cctgaatctg caacagcgca tgacgatgct ctgccagctc
    16501 ctcacgcaga cggatggtgg cttccagatc ctcgcctttt tccagacgag actggagatc
    16561 ggcaaattgc agttcgcgtt cacgtaccag ataactgatg ccatacagcg ctacgcggcg
    16621 atagtcaccg ataatgcgcc cacggccata gccatctggt aaaccggtca gcacgccaga
    16681 tttacggcag cgcagcatat ccggtgagta aacatcaaat acgccctggt tatgggtttt
    16741 acgcagatcg gtaaacagat attcaaattc actgtccatt tcacggccat aggcgtggaa
    16801 tgaactttta atcatattaa tgccaccgaa cgggtgtagc gcacgtttca acggcgcatc
    16861 cgtttgcagg ccaacaattt tttccagcgg ctggttaata tatcccgcat catgagcggt
    16921 aattgtggtg gcaatattgg tatcgaaatc aaccggcgcg tgggttgcgt tttcgatacg
    16981 gataccttcc attacttttt cccacaattc cgtggtggca ggcgtcgctt cggcgaggaa
    17041 agattcatcg ccttcatacg gtgtatagtt atgttgaata aaatcgcgga cattaatttc
    17101 gtttttccag tccgtacctt taaagccaag ccatgcgtcg gcgtacagct tatcgctggt
    17161 atcaatatct accttcatga aaaataatct ctctacaata cttcaactaa attatgcaaa
    17221 ttctgcgggc gcgttaactt tgcctaaatg aatggcatcc aaagcaatca ttttttcttc
    17281 gttagtcgga ataacagcgc aaatgacacg cgcattttca ctggaaacaa ttcgctcacc
    17341 acaggagtta gagcgattat tcatttctgt atcaatctct acgcctaata cagccaaatg
    17401 ttccatgacc agacgacgaa ttaagcttga attctctcct attccgccgg tgaatataat
    17461 tccatccagg cgacgtaatg aagctgcgtg tccggcaata tgacgggcaa ttcggtgaac
    17521 aaaggtttta attgccagtt gcgcgcgttc gtgaccttca tgccaggctt tttccagaac
    17581 acgtaaatcc gaagaaagac cggaaatacc taataatccc gactctttat tcactacgcg
    17641 ttccaggtca cccaagctct ggttggtttg gctggcgacc caggacatcg caccaaaatc
    17701 gacatcgcca ctgcgggtac ccatcatcaa gccttccagc ggcgtcattc ccattgaggt
    17761 gtcaacactc tgaccgttgc gaactgcgca gattgacgcg ccattgccaa gatgcgccac
    17821 aaccaggccg gagtcatctt ccgctagatt cagcaaagaa tgtgcgcgct gggaaacata
    17881 gcggtgcgac gtgccgtgga aaccataacg gcgtacacct aactcttcat aatatttcca
    17941 cggcaggccg tataaataag cttccggagc catcgtctgg tggaaactgg tatcaaatac
    18001 cgccacctga gttacgcccg gaaataattg ctgcgccgat tcaataccac ttaaattggc
    18061 gtaattatgc aggggtgcca gtggagaaac gcgacggata ttatcaatga cctcatcggt
    18121 aataatggcg gactcggtaa aaatactgcc gccgtgagcg atgcggtggc caattaaggc
    18181 cacactgtca tttaaattcc gtttttccag ttcaaatgca attgccttca atgcaccttc
    18241 gtagctgtgg tgagccagcg gtgctggctc tcccccattt acggataaga atgcattttc
    18301 tgagttaata ccgtcggcaa tacctgacat taatacttca cagtcgctgg catcgagtac
    18361 ggaaaactta atcgaagacg aaccacagtt aataaccaaa acaaccggaa attcattcat
    18421 ctcttttctc atcctgagtt acggattaaa acagtttgta tacgatgttc aggatggtca
    18481 gcagaccaat cacggtaaca aacacgttat ccagacgacc acggtatttc gccagagacg
    18541 gtgctttacg gatggcatac atcggcaaca ggcacagcag ggatgcgata atcggtgcgc
    18601 ccatggcttc aataaggtcg aggatgttcg ggttggcgta ggcaacaacc caggtggagc
    18661 ccatgatgaa gatcatgctg atagtgttca gtttacccag cgacacttta gttttgtcgc
    18721 ctttataacc gaacttcaga atcagaccat tcaagccttc cagcgtcccc agatagtgac
    18781 cgaagaaaga tttgaagata gccacgagtg cgatgatgga agccgcatat tccagtgtaa
    18841 tcgcgaacgt tgttttggta ccggtcatgg acgcaaagtg gttagccaga taagaaagca
    18901 ctggaatatt ctgcgctttg gcttccgcca tgttggccgg agacagcgta aacaggcagc
    18961 taaaggcaaa gaacatcacc actgcaacca tcagcatgct ggcacgagaa atgatttggg
    19021 aacatttacg ttcggtgaag tcgcgaccga agtctttctc atactcttca cgtttagaaa
    19081 ccacgaagga agagacgatt ggcgagaagt taaaggagaa aaccatgatg gaaatcccca
    19141 gccagacagt gatcaggata ccgtcatgac cggttaacga cagcgaaccg aggtcaacct
    19201 ggtcgataac tgcagagttc cagtaaggga tcagcgacag agaaatcagc accaggctgg
    19261 cgataaacgg ccataccagg tagctcatca ctttaaccat cagatcctta ccaaaccaga
    19321 tgacgaaagc catcagcagc aacaggaaca gcgccacaaa gccgcgattc agcggtgcaa
    19381 atccgagctg gttttcccag aacgtcataa aggtattggt aatagtaacg ccataaatcc
    19441 acagcagtgg gcaaatcgcg aagaagtaca ggaacgtgat aaccacgccg ccagttttac
    19501 caaaatgctc ttccaccgtt tccgtaatgt tgccggaagg gttagagcca gaaagacaca
    19561 gacgcgccag cgcccggtgg caataaaatg cgatggggta tgccaatacc aacatcagaa
    19621 gaatcgggat cagtccgcca aaacctgcgc ggatagggaa gaacagcacc ccggcgccga
    19681 ttgccgtacc aaacaagcct aacgtccatg tggtatctga tttacgccag gacgattgtt
    19741 ttgtctggct ggatacaatg ctatctgaag tactcatatc ctatcctcaa cgaattaatt
    19801 aagcgtcaac gaaaccggtg atttgagaga cgcgagaaag atcgatattg ccgccggaaa
    19861 taatactgac ggtttttctg ttttgaatat attggtctaa tttaccgctt aataatgcag
    19921 cacatgccag agcacctgcg ccttcggtga cgactttatt gcgctgaatt aaggcaatca
    19981 tactgtttct gatttcgtct tcgctgacca gcacgatgtc atcgactaat tcacgaacga
    20041 tttcgtaagt taaattaccc gggcgggaga catcacaacc atccgccagg gtgccggtag
    20101 ttcggtgcgt ggttatttct ccggagtgga aagaagccgc catgccgtga acgttttctg
    20161 actgtacgcc aataacacga atggtcgggt taatagattt aattgccacc gcaataccag
    20221 caattaaacc accaccacca attggcacaa tcacgttatc gacatcatag agatcttcca
    20281 taatttccag accaatcgtt ccctggccag caatcacttt cggatcatcg taaggtggga
    20341 taaaaatacg accttccatt tcgacaattt cgctcacttt agcgatagtg tcgttgaagt
    20401 tatcaccatg cagaacgact tctgcggagt agtcgcacgt tgccgctact ttggattttg
    20461 gcgcaccttt tggcatcacc actttaccgt cgatacccag catcgcgcag gagagcgaaa
    20521 ccccttgcgc atggttgccc gcagaacagg ccaccacgcc tttgcgtttt tccgcatcgg
    20581 tcagtgaact taatttatta aatgcgccac gaattttaaa tgaacccgta cgctgcatat
    20641 tttcaaactt caggaatatt tcacctttgc aacgttcact aaaatagttg gagcgaggca
    20701 tgcctgtttt ataaattcgc ccagccagtc gttgtttcgc ttcaataata tcatcaatag
    20761 caaccggcag atcgtatgta atatgcatta taaaacctct tcgcctgaat taaatatgta
    20821 gataaccgta accgacacct gcaaaacaga caggtggatt atttatgttt aaataaaaac
    20881 aaataactaa ccaacttcta ttaatagcct tcgtctacac ccattataag atgaatactc
    20941 tttggctaat tccaccaaaa ccgatgctgc ttttttaata cgataatttt tcgaccatac
    21001 cgcggcatat tgtgccacag gtaatgtttc ttcaactgga atagtaataa attgatttga
    21061 accaaaaggt gacgtcatat cacaaggaat tacagttaag aaatcagcat tgagaacaag
    21121 attataaatt gtcacgactg agtcggtttt aacgatgttt tcaatactga tgccatttct
    21181 ttgtaacgta gtaagaagct cgctgtagta ccccatattg gtttgtggca acacccactg
    21241 ttcgttcttc aacgactcca gcgtggtggt gccggtgcat gttcgggact tactggctac
    21301 cagcacaaac tcggactcga acagcggctc aacatgtaaa tcctgaagct tcatttctgc
    21361 acttaacgta ccaatcgcaa aatccagtcg accgtcgcgg attgccggta agaacgaaga
    21421 cagttgcgct tcatacatag aaacctgcgc tttcgggaac acctctttga acttgttgat
    21481 catccctgac ataaaagtaa aaccaatcaa tgaaggaaaa ccaaatgaga cttccaccac
    21541 cgcctcagaa gacataccgc ttatctcatt aaccatattt ttcatttcac gggtaatgga
    21601 ttcggaacgg gagagtaaca attgaccggc aggtgttaat gttacaccgg tatttttccg
    21661 caccactaat tccacaccaa aataatcttc aatatcgtta atgattttac tgacggccgg
    21721 ttgagttaac cctaattctt ttgcagccga gccgatagag ccacttctaa tgacttcctg
    21781 aaagactacc aggtgctgcg ttttcggaag aagaatagtg ctcataacga cctacgttaa
    21841 ttacctcatt gacggcatga agtgtatcaa aatgaaatga acaggatatg tgcgaccact
    21901 cacaaattaa ctttcattac tttccagggt atcgttatta caattaaata tctttaaata
    21961 tcaacaagtt aaaacataaa aatcagcata aaccctgatt tttatcaaaa aaaatgacgg
    22021 ggataaccat attttatggc gataacatca ttcgttatgt ggttaataca aaaaaggggc
    22081 tgagaccata tttcaagcaa ttaccggata attaccaggc aaaatttgag ttaaatttaa
    22141 tgagcaagtt ctcaaatttt attataaata aaccattttc agcgataaat actgcggcac
    22201 gtcacatttt ttcacgctat ttgttggaga acaaacattt attttatcaa tattttaaaa
    22261 tttcgaatac aggtattgat catctcgaac aattgattaa cgtcaacttt ttctcttctg
    22321 acaggacgtc attttgtgaa tgcaatcgtt ttccataaat tcttctcccc tcataggcga
    22381 cgaatagcat tttgtgttga ggatcacaaa acaaataatt gctggtcgcc gcgataaggt
    22441 cagacgaagt caacaagggg aattttcact gtgctttaca tcagcgtagg acacagaatg
    22501 ttgcttcgtt tactgtaacg ccgggtaaat gagcgttttt tgatagtgcg taagtgtcgt
    22561 gcgaggaaaa taagcatcta ttattgtttg tcatgacgac aaggcaggca tcaatgaaag
    22621 gcttcccaat tgcacatatt tttcaccctt caatcccgcc aatgcacgca gtggttaaca
    22681 atcacaatag aaatattgat tattggacgg taaaaagaaa gtttgcagaa attgtctcca
    22741 ccaatgacgt taaaaaaatt tacagtataa gtaatga
//
LOCUS       DADMJE010000056        22768 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.057, whole genome shotgun sequence.
ACCESSION   DADMJE010000056 DADMJE010000000
VERSION     DADMJE010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22768)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22768)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22768
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.057"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            235..718
                     /locus_tag="JN001_001942"
                     /pseudo
     CDS             235..718
                     /locus_tag="JN001_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000553611.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-associated peptidase"
     gene            821..944
                     /locus_tag="JN001_001943"
                     /pseudo
     CDS             821..944
                     /locus_tag="JN001_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708157.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1877 domain-containing protein"
     gene            913..1176
                     /locus_tag="JN001_001944"
     CDS             913..1176
                     /locus_tag="JN001_001944"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1877 family protein"
                     /protein_id="HAY9053188.1"
                     /translation="MTRFQDYADWILINAGIFYTFGLTGTPAFDPAKNDPLSRAVLGE
                     HSLEDGIDGFLGLTWNQELAATIDRLESLDRSKLRKQFSIKRL"
     gene            complement(1391..2848)
                     /gene="nuoN"
                     /locus_tag="JN001_001945"
     CDS             complement(1391..2848)
                     /gene="nuoN"
                     /locus_tag="JN001_001945"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HAY9053189.1"
                     /translation="MTITPQNLIALLPLLIVGLTVVVVMLSIAWRRNHFLNATLSVIG
                     LNAALVSLWFVGQAGAMDVTPLMRVDGFAMLYTGLVLLASLATCTFAYPWLEGYNDNK
                     DEFYLLVLIAALGGILLANANHLASLFLGIELISLPLFGLVGYAFRQKRSLEASIKYT
                     ILSAAASSFLLFGMALVYAQSGDLSFVALGKNLGDGMLNEPLLLAGFGMMIVGLGFKL
                     SLVPFHLWTPDVYQGAPAPVSTFLATASKIAIFGVVMRLFLYAPVGDSEAIRVVLAII
                     AFASIIFGNLMALSQTNIKRLLGYSSISHLGYLLVALIALQTGEMSMEAVGVYLAGYL
                     FSSLGAFGVVSLMSSPYRGPDADSLFSYRGLFWHRPILAAVMTVMMLSLAGIPMTLGF
                     IGKFYVLAVGVQAHLWWLVGAVVVGSAIGLYYYLRVAVSLYLHAPEQPGRDAPSNWQY
                     SAGGIVVLISALLVLVLGVWPQSLISIVRLAMPLM"
     gene            complement(2855..4384)
                     /gene="nuoM"
                     /locus_tag="JN001_001946"
     CDS             complement(2855..4384)
                     /gene="nuoM"
                     /locus_tag="JN001_001946"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HAY9053190.1"
                     /translation="MLLPWLILIPFIGGFLCWQTEHFDVKVPRWIALITMGLTLALSL
                     QLWLQGGYSLTQSAGIPQWQSEFDMPWIPRFGISIHLAIDGLSLLMVVLTGLLGVLAV
                     LCSWKEIEKYQGFFHLNLMWILGGVIGVFLAIDMFLFFFFWEMMLVPMYFLIALWGHK
                     ASDGKTRITAATKFFIYTQASGLVMLIAILALVFVHYNATGVWTFNYEELLNTPMSSG
                     VEYLLMLGFFIAFAVKMPVVPLHGWLPDAHSQAPTAGSVDLAGILLKTAAYGLLRFSL
                     PLFPNASAEFAPIAMWLGVIGIFYGAWMAFAQTDIKRLIAYTSVSHMGFVLIAIYTGS
                     QLAYQGAVIQMIAHGLSAAGLFILCGQLYERIHTRDMRMMGGLWSKMKWLPALSLFFA
                     VATLGMPGTGNFVGEFMILFGSFQVVPVITVISTFGLVFASVYSLAMLHRAYFGKAKS
                     QIASQELPGMSLRELFMILLLVVLLVLLGFYPQPILDTSHSAIGNIQQWFVNSVTTTR
                     P"
     gene            complement(4548..6389)
                     /gene="nuoL"
                     /locus_tag="JN001_001947"
     CDS             complement(4548..6389)
                     /gene="nuoL"
                     /locus_tag="JN001_001947"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HAY9053191.1"
                     /translation="MNMLALTIILPLIGFVLLAFSRGRWSENVSAIVGVGSVGLAALV
                     TAFIGVDFFANGEQAYSQPLWTWMSVGDFNIGFNLVLDGLSLTMLSVVTGVGFLIHMY
                     ASWYMRGEEGYSRFFAYTNLFIASMVVLVLADNLLLMYLGWEGVGLCSYLLIGFYYTD
                     PKNGAAAMKAFVVTRVGDVFLAFALFILYNELGTLNFREMVELAPAHFADGNNMLMWA
                     TLMLLGGAVGKSAQLPLQTWLADAMAGPTPVSALIHAATMVTAGVYLIARTHGLFLMT
                     PEILHLVGIVGAVTLLLAGFAALVQTDIKRVLAYSTMSQIGYMFLALGVQAWDAAIFH
                     LMTHAFFKALLFLASGSVILACHHEQNIFKMGGLRKSIPLVYFCFLVGGAALSALPLV
                     TAGFFSKDEILAGAMANGHINLMVAGLVGAFMTSLYTFRMIFIVFHGKEQIHAHAVKG
                     VTHSLPLIVLLILSTFVGALIVPPLQSVLPQTTELAHGSMLTLEITSGVVAVVGILLA
                     AWLWQGKRTLVTSIANSAPGRLLGTWWYNAWGFDWLYDKVFVKPFLGIAWLLKRDPLN
                     SMMNIPAVLSRFAGKGLLLSENGYLRWYVASMSIGAVVVLALLMVLR"
     gene            complement(6386..6688)
                     /gene="nuoK"
                     /locus_tag="JN001_001948"
     CDS             complement(6386..6688)
                     /gene="nuoK"
                     /locus_tag="JN001_001948"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HAY9053192.1"
                     /translation="MIPLQHGLILSAILFVLGLTGLVIRRNLLFMLIGLEIMINASAL
                     AFVVAGSYWGQTDGQVMYILAISLAAAEASIGLALLLQLHRRRQNLNIDSVSEMRG"
     gene            complement(6685..7239)
                     /gene="nuoJ"
                     /locus_tag="JN001_001949"
     CDS             complement(6685..7239)
                     /gene="nuoJ"
                     /locus_tag="JN001_001949"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001774950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HAY9053193.1"
                     /translation="MEFAFYICGLIAILATLRVITHTNPVHALLYLIISLLAISGVFF
                     SLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGGSEIEQERQWLKPQVWIGPAILSAI
                     MLVVIVYAILGVNDQGIDGTPISAKAVGITLFGPYVLAVELASMLLLAGLVVAFHVGR
                     EERAGEVLSNRKDDSAKRKTEEHA"
     gene            complement(7251..7793)
                     /gene="nuoI"
                     /locus_tag="JN001_001950"
     CDS             complement(7251..7793)
                     /gene="nuoI"
                     /locus_tag="JN001_001950"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015959823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HAY9053194.1"
                     /translation="MTLKELLVGFGTQVRSIWMIGLHAFAKRETRMYPEEPVYLPPRY
                     RGRIVLTRDPDGEERCVACNLCAVACPVGCISLQKAETKDGRWYPEFFRINFSRCIFC
                     GLCEEACPTTAIQLTPDFEMGEYKRQDLVYEKEDLLISGPGKYPEYNFYRMAGMAIDG
                     KDKGEAENEAKPIDVKSLLP"
     gene            complement(7808..8785)
                     /gene="nuoH"
                     /locus_tag="JN001_001951"
     CDS             complement(7808..8785)
                     /gene="nuoH"
                     /locus_tag="JN001_001951"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015875065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoH"
                     /protein_id="HAY9053195.1"
                     /translation="MSWISPELIEILLTILKAVVILLVVVTCGAFMSFGERRLLGLFQ
                     NRYGPNRVGWGGSLQLVADMIKMFFKEDWIPKFSDRVIFTLAPMIAFTSLLLAFAIVP
                     VSPGWVVADLNIGILFFLMMAGLAVYAVLFAGWSSNNKYSLLGAMRASAQTLSYEVFL
                     GLSLMGVVAQAGSFNMTDIVNSQAHVWNVIPQFFGFITFAIAGVAVCHRHPFDQPEAE
                     QELADGYHIEYSGMKFGLFFVGEYIGIVTISALIVTLFFGGWQGPLLPPFIWFALKTA
                     FFMMMFILIRASLPRPRYDQVMSFGWKICLPLTLINLLVTAAVILWQAQ"
     gene            complement(8782..11508)
                     /gene="nuoG"
                     /locus_tag="JN001_001952"
     CDS             complement(8782..11508)
                     /gene="nuoG"
                     /locus_tag="JN001_001952"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311194.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HAY9053196.1"
                     /translation="MATIHVDGKEYEVNGADNLLEACLSLGLDIPYFCWHPALGSVGA
                     CRQCAVKQYQNAEDTRGRLVMSCMTPASDGTFISIDDEEAKQFRESVVEWLMTNHPHD
                     CPVCEEGGNCHLQDMTVMTGHSFRRYRFTKRTHRNQDLGPFISHEMNRCIACYRCVRY
                     YKDYADGTDLGVYGAHDNVYFGRPEDGTLESEFSGNLVEICPTGVFTDKTHSERYNRK
                     WDMQFAPSICQQCSIGCNISPGERYGELRRIENRYNGTVNHYFLCDRGRFGYGYVNLK
                     DRPRQPVQRRGDDFITLNAEQAMQGAADILRQSKKVIGIGSPRASVESNFALRELVGE
                     ENFYTGIAHGEQERLQLALKVLREGGIYTPALREIESYDAVLVLGEDVTQTGARVALA
                     VRQAVKGKAREMAAAQKVADWQIAAILNIGQRAKHPLFVTNVDDTRLDDIAAWTYRAP
                     VEDQARLGFAIAHALDNSAPAVDGIEPELQSKIDVIVQALAGAKKPLIISGTNAGSLE
                     VIQAAANVAKALKGRGADVGITMIARSVNSMGLGIMGGGSLEEALTELETGRADAVVV
                     LENDLHRHASATRVNAALAKAPLVMVVDHQRTAIMENAHLVLSAASFAESDGTVINNE
                     GRAQRFFQVYDPAYYDSKTVMLESWRWLHSLHSTLLSREVDWTQLDHVIDAVVAKIPE
                     LAGIKDAAPDATFRIRGQKLAREPHRYSGRTAMRANISVHEPRQPQDIDTMFTFSMEG
                     NNQPTAHRSQVPFAWAPGWNSPQAWNKFQDEVGGKLRFGDPGVRLFETSENGLDYFTS
                     VPARFQPQDGKWRIAPYYHLFGSDELSQRAPVFQSRMPQPYIKLNPADAAKLGVNAGT
                     RVSFSYDGNTVTLPVEIAEGLTAGQVGLPMGMSGIAPVLAGAHLEDLKEAQQ"
     gene            complement(11561..12898)
                     /gene="nuoF"
                     /locus_tag="JN001_001953"
     CDS             complement(11561..12898)
                     /gene="nuoF"
                     /locus_tag="JN001_001953"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HAY9053197.1"
                     /translation="MKNIIRTPETHPLTWRLRDDKQPVWLDEYRSKNGYEGARKALTG
                     LSPDEIVNQVKDAGLKGRGGAGFSTGLKWSLMPKDESMNIRYLLCNADEMEPGTYKDR
                     LLMEQLPHLLVEGMLISAFALKAYRGYIFLRGEYIEAAVNLRRAIAEATEAGLLGKNI
                     MGTGFDFELFVHTGAGRYICGEETALINSLEGRRANPRSKPPFPATSGVWGKPTCVNN
                     VETLCNVPAILANGVEWYQNISKSKDAGTKLMGFSGRVKNPGLWELPFGTTAREILED
                     YAGGMRDGLKFKAWQPGGAGTDFLTEAHLDLPMEFESIGKAGSRLGTALAMAVDHEIN
                     MVSLVRNLEEFFARESCGWCTPCRDGLPWSVKILRALERGEGQPGDIETLEQLCRFLG
                     PGKTFCAHAPGAVEPLQSAIKYFREEFEAGIKQPFSNTHLINGIQPNLLKERW"
     gene            complement(12895..13395)
                     /gene="nuoE"
                     /locus_tag="JN001_001954"
     CDS             complement(12895..13395)
                     /gene="nuoE"
                     /locus_tag="JN001_001954"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012124159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HAY9053198.1"
                     /translation="MHENQQPQTEAFELSAAEREAIEHEMHHYEDPRAASIEALKIVQ
                     KQRGWVPDGAIHAIADVLGIPASDVEGVATFYSQIFRQPVGRHVIRYCDSVVCHINGY
                     QGIQAALEKKLNIKPGQTTFDGRFTLLPTCCLGNCDKGPNMMIDEDTHAHLTPEAIPE
                     LLERYK"
     gene            complement(13398..15200)
                     /gene="nuoC"
                     /locus_tag="JN001_001955"
     CDS             complement(13398..15200)
                     /gene="nuoC"
                     /locus_tag="JN001_001955"
                     /EC_number="1.6.5.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C/D"
                     /protein_id="HAY9053199.1"
                     /translation="MVNNMTDLTAQEPAWQTRDHLDDPVIGELRNRFGPDAFTVQATR
                     TGVPVVWIKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHREGLPAADFSVFYHL
                     ISIDRNRDIMLKVALAENDLHVPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMM
                     PQTWKGHPLRKDYPARATEFSPFELTKAKQDLEMEALTFKPEEWGMKRGTENEDFMFL
                     NLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIE
                     YLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMT
                     PVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLDWMPKRLA
                     SYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKARPYSGYENF
                     DFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERT
                     LQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSY
                     AHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR"
     gene            complement(15294..15956)
                     /locus_tag="JN001_001956"
     CDS             complement(15294..15956)
                     /locus_tag="JN001_001956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017490251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B"
                     /protein_id="HAY9053200.1"
                     /translation="MDYTLTRIDPNGENDRYPLQKQEIVTDPLEQEVNKNVFMGKLND
                     MVNWGRKNSIWPYNFGLSCCYVEMVTSFTAVHDVARFGAEVLRASPRQADLMVVAGTC
                     FTKMAPVIQRLYDQMLEPKWVISMGACANSGGMYDIYSVVQGVDKFIPVDVYIPGCPP
                     RPEAYMQALMLLQESIGKERRPLSWVVGDQGVYRANMQSERERKRGERIAVTNLRTPD
                     EI"
     gene            complement(15972..16415)
                     /gene="nuoA"
                     /locus_tag="JN001_001957"
     CDS             complement(15972..16415)
                     /gene="nuoA"
                     /locus_tag="JN001_001957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoA"
                     /protein_id="HAY9053201.1"
                     /translation="MSMSTSTEVIAHHWAFAIFLIVAIGLCCLMLVGGWFLGGRARAR
                     SKNVPFESGIDSVGSARLRLSAKFYLVAMFFVIFDVEALYLFAWSTSIRESGWVGFVE
                     AAIFIFVLLAGLVYLVRIGALDWTPARSRRERMNPETNSIANRQR"
     gene            complement(17046..17984)
                     /gene="lrhA"
                     /locus_tag="JN001_001958"
     CDS             complement(17046..17984)
                     /gene="lrhA"
                     /locus_tag="JN001_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LrhA"
                     /protein_id="HAY9053202.1"
                     /translation="MISANRPIINLDLDLLRTFVAVADLNTFAAAAAAVCRTQSAVSQ
                     QMQRLEQLVGKELFARHGRNKLLTEHGIQLLGYARKILRFNDEACSSLMFSNLQGVLT
                     IGASDESADTILPFLLNRVSSVYPKLALDVRVKRNAYMAEMLESQEVDLMVTTHRPSA
                     FKALNLRTSPTHWYCAAEYVLQKGEPIPLVLLDDPSPFRDMVLATLNKADIPWRLAYV
                     ASTLPAVRAAVKAGLGVTARPVEMMSPDLRVLSGVDGLPPLPDTEYLLCYDPSSNNEL
                     AQVIYQAMESYHNPWQYSPMSAPEGDDSLLIERDIE"
     gene            18903..20120
                     /locus_tag="JN001_001959"
     CDS             18903..20120
                     /locus_tag="JN001_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HAY9053203.1"
                     /translation="MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPA
                     PFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGN
                     GVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDD
                     IRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDA
                     EHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRL
                     CANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYM
                     FPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSL
                     SKFARFLSGYHQL"
     gene            20204..20802
                     /gene="yfbR"
                     /locus_tag="JN001_001960"
                     /pseudo
     CDS             20204..20802
                     /gene="yfbR"
                     /locus_tag="JN001_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311202.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5'-deoxynucleotidase"
     gene            complement(20861..22693)
                     /locus_tag="JN001_001961"
     CDS             complement(20861..22693)
                     /locus_tag="JN001_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLC13 family permease"
                     /protein_id="HAY9053204.1"
                     /translation="MNGELIWVLSLLAVAIVLFATGRVRMDAVALFVIVAFALSGTLT
                     VPEVFSGFSDPNVVLIAALFIIGDGLVRTGVATVMGTWLVKVAGNSEIKMLVLLMLTV
                     AGLGAFMSSTGVVAIFIPVVLSVAMRMQTSPSRLMMPLSFAGLISGMMTLVATPPNLV
                     VNSELLREGYHGFSFFSVTPVGLVVLVLGILYMLVMRFMLKGDTQTPQREGWTRRTFR
                     DLIREYRLTGRARRLAIRPGSPMIGQRLDDLKLRERYGANVIGVERWRRFRRVIVNVN
                     GVSEFRARDVLLIDMSAADVDLRQFCSEQLLEPMVLRGEYFSDQALDVGMAEISLIPE
                     SELIGKSVREIGFRTRYGLNVVGLKRNGVALEGSLADEPLLLGDIILVVGNWKLIGML
                     AKQGRDFVALNLPEEVSEASPAHSQAPHAIFCLVLMVALMLTDEIPNPVAAIIACLLM
                     GKFRCIDAESAYKSIHWPSIILIVGMMPFAVALQKTGGVALAVKGLMDIGGGYGPHMM
                     LGCLFVLSAVIGLFISNTATAVLMAPIALAAAKTMGVSPYPFAMVVAMAASAAFMTPV
                     SSPVNTLVLGPGNYSFSDFVKLGVPFTIIVMAVCVVMIPMLFPF"
BASE COUNT         5844 a         6273 c         5696 g         4955 t
ORIGIN      
        1 tgtatagatc taacaaccgt aataaaacaa atactcataa ctcattataa ataatgataa
       61 aataacgtct tttattgata atttatatat gggaaaaatt ccttttgtta tattgtttct
      121 gatttcactc cctctgatta tttttaccaa ccctgggtca ctgcattacc accaacgccc
      181 cgacacgtca gtcctgagca attagaaaaa acagttcgtt atcttacaca aactgtgcat
      241 ccacgtaatg ccgacaatat tgataatctg aataggtccg tagagtatat aaaagagttc
      301 tttgtcagta gcggtgccag agttaccgcg cagggcgtcc ccgattggct attacgactc
      361 tgcgcctggt agccaggatt acctttaccc gcaatgtcct ggctttatcc cgatcggggg
      421 gactttattg cctggtcggc agaatacagg atatcaacgc cgttcgtcag gtaaaaacgg
      481 cattgttatc atcccgggat ttatctgttt attctatgaa tgccccatgg tttattcccg
      541 gtattgattt ctctgaccac ctgaattatt ggcaacacga tattcccgcc gtaatgatta
      601 ctgacaccgc tttttatcgt aataaacaat accacttgcc cggtgataca gcagacagat
      661 tgaattatca gaaaatggct cagatggtgt tataaccttg ttacacaaca gtaaataata
      721 aaaatttctc gaggcgggtc cagaaacagc gacatgtaca ttttattttc cctcgtctgt
      781 tttaagatgc gaaacataaa attcaatgga ggaaaaataa atgggaatga ttggttattt
      841 tgcagaaatt gactcagaaa agattaacca atctgcttga gtctactgaa aaacctttga
      901 tggataatat acatgacacg ctttcaggat tacgccgact ggatattgat aaacgctggg
      961 attttttaca cttttgggct gacaggcacc cctgcttttg atcccgcgaa gaatgatccg
     1021 ctgagtcgtg ccgtgcttgg tgaacacagc ctcgaagatg gcatagatgg cttcctggga
     1081 ttgacctgga atcaggaatt agccgcgaca atcgaccgac tggaatcact ggatcgaagt
     1141 aagctgcgta aacagttttc cattaagcga ctatgaaatg gagatttatc cgggagtgac
     1201 cttttcagaa gagttagagg ggcaactctt tgcctcgatc atgcttgata tggaaaagct
     1261 gattagcgcg tatcgacgta tgctgcgaca agggaatcat gcgctgacgg ttattgttgg
     1321 gtgatggtgt cagagcgcca aaaaaaaccg ccgaacatgt cggcggtttt ctgacttaca
     1381 aactaacaga ttacatcagc ggcattgcta accgcacaat actaatcagc gattgtggcc
     1441 atacacccag caccagtacc aacagtgcag aaatcagcac cacgataccg cccgcgctgt
     1501 actgccagtt tgacggtgca tcgcgacccg gttgttccgg tgcgtgcagg tacaggctca
     1561 ccgccacgcg caggtagtag tagaggccga ttgccgaacc gacaaccacg gcacccacca
     1621 gccaccacaa gtgtgcctgg acaccgaccg ccagcacgta gaacttaccg ataaagccca
     1681 gcgtcatcgg gataccggcc agagacagca tcatcaccgt catcactgcc gcgaggatcg
     1741 gacgatgcca gaacagaccg cggtaagaga acagggaatc agcatccggg ccacgatacg
     1801 ggctggacat caggctgacc acgccgaacg cgccgaggct gctgaacaga taaccggcca
     1861 ggtaaacccc taccgcttcc atcgacatct cgccggtttg cagcgcaatc agcgccacca
     1921 gcagatagcc gaggtgagag atagatgagt aaccgagcag acgtttgatg ttggtctggc
     1981 tcaacgccat caggttaccg aagatgatgg aggcaaaggc gataatcgcc agtactacgc
     2041 gaatcgcttc gctgtcaccc accggtgcat agaggaacag acgcatcacc acaccgaaga
     2101 tagcgatttt gctcgccgtc gccaggaaag tggaaaccgg cgcaggcgcg ccctggtata
     2161 cgtctggcgt ccacaggtgg aacggcacca gagagagttt gaagccgagg ccaacaatca
     2221 tcatgccgaa acctgccagc aacagcggct cgttgagcat accgtcgccg aggtttttac
     2281 ccagcgcgac aaacgacagg tcgccagact gcgcatacac cagcgccata ccaaacagca
     2341 ggaaagaaga cgctgcggca gaaaggatgg tgtatttgat actggcttcc agcgaacgtt
     2401 tctggcggaa agcgtaaccg accaggccaa acagcggcaa agagatcagt tcaataccga
     2461 ggaacagaga cgccagatgg tttgcattcg ccagcaggat cccgcccagc gcggcaatta
     2521 acaccaacag gtagaactca tccttgttgt cgttatagcc ttcaagccac gggtaggcga
     2581 aagtacaggt ggcgaggctc gccaacaata ccagcccggt gtaaagcatg gcgaaaccat
     2641 caacgcgcat cagcggcgta acgtccatag cgcccgcctg gccaacaaac cagagcgaaa
     2701 ccagcgccgc gttaagccca ataaccgaga gcgtagcgtt gaggaaatga ttgcgtcgcc
     2761 acgcaatgga gagcatcaca accaccaccg ttaagccgac gatcagcaac ggtagcagtg
     2821 cgatcaggtt ttgtggagtt attgtcatgg cgatttacgg ccttgtagta gtaacggaat
     2881 taacaaacca ctgctggata ttgccaatcg cggagtgcga ggtatccaga atcggctgcg
     2941 gatagaagcc cagcagtacc agcagcacca ccagcaacag gatcataaac agctcacgca
     3001 gcgacatccc tggcagttcc tggctggcaa tctggctttt cgctttaccg aagtaagcgc
     3061 gatgcaacat cgccagcgaa taaacagatg caaagaccag cccaaaggta gagataacgg
     3121 taatcaccgg gacaacctgg aagctgccga acagaatcat aaattcgccg acgaagttac
     3181 cggtgccagg catcccaagc gttgccaccg caaagaacag cgacaatgct ggcagccatt
     3241 tcatcttgct ccacagaccg cccatcatgc gcatgtcgcg ggtatggata cgttcataaa
     3301 gctgaccaca aagaataaac agacccgccg ccgacaaacc gtgcgcaatc atctggatta
     3361 ccgcgccctg gtaggccaac tggctgccgg tgtagatagc aatcagcacg aagcccatgt
     3421 gggaaaccga ggtgtaggcg atcagacgtt tgatatcggt ctgggcgaag gccatccacg
     3481 caccgtagaa gatgccgata acacccagcc acatagcaat tggcgcgaac tctgccgacg
     3541 cgttcgggaa cagcggcagg gagaaacgca gcaaaccgta agcggcagtt ttcagcaaga
     3601 tccccgcgag atcaacggaa ccggcggtcg gagcctggga gtgcgcatcc ggcagccagc
     3661 catgcagcgg aaccaccggc attttgactg cgaaggcgat gaagaagccc agcattaaca
     3721 ggtattccac accactggac attggcgtat tcagcagctc ttcatagttg aaggtccaga
     3781 cgccggtcgc attgtagtga acaaaaacca gcgccaggat ggcaatcaac atcaccaggc
     3841 cactcgcctg ggtgtaaatg aagaacttgg ttgccgccgt gatacgcgtt ttaccgtcag
     3901 aggctttatg cccccacagt gcgatcagga agtacatcgg caccagcatc atttcccaga
     3961 agaagaagaa caggaacatg tcgatggcaa ggaacacgcc gataacgccg cccaggatcc
     4021 acatcaggtt gaggtggaag aagccctgat atttttcgat ctctttccac gaacagagta
     4081 ccgccagcac accgagcaga ccggtcagca cgaccatcag cagcgacaga ccgtcaatgg
     4141 cgagatgaat agagatacca aaacgtggga tccacggcat gtcgaattca gactgccact
     4201 gcggaattcc ggcggattgc gtcagtgaat aaccgccctg caaccacagt tgcagcgaca
     4261 gcgccagcgt caatcccatg gtgatcagcg cgatccagcg tggcaccttg acgtcaaagt
     4321 gttcggtctg ccagcacagg aagccgccaa taaagggaat taatattagc cagggtagta
     4381 acatggcgat ctttattcct tgtaaaagtc ccgtcaggac cggattttca acgaattctc
     4441 acgacagaaa attctcttcg gactgggggt agtgtcggat gcgccgcgaa ggcagcttat
     4501 ccgacctacg ttcttatatg cccaggggca atcccacaat ccttaactca acgcagtacc
     4561 atcaacagtg ccagcaccac gaccgcaccg atgctcatgg atgccacata ccagcgcaga
     4621 taaccgttct cgcttaacag caggccttta cctgcaaagc gggaaagaac cgccggaatg
     4681 ttcatcattg agttcagcgg atcgcgtttc agcaaccagg caatacccag aaacggcttg
     4741 acgaacactt tgtcgtacag ccagtcaaag ccccaggcgt tgtaccacca ggtgcccagc
     4801 agacggcccg gcgcactgtt ggcaatggag gtcaccagag tacgtttacc ctgccacagc
     4861 caggctgcca gcagaatgcc gaccaccgcg accacgccag aggtaatttc cagggtcaac
     4921 atgctgccgt gcgccagttc cgtcgtttgc ggaagcacgc tctgcagcgg cggtacaatc
     4981 agtgcgccaa cgaaggtgga aaggatcagc agcacaatca gcggcaggct gtgagttacc
     5041 cctttcacgg cgtgagcgtg aatttgttct tttccgtgga agacgatgaa aatcatacgg
     5101 aaggtgtaga gcgaggtcat aaacgcaccg accagacctg ccaccatcag attgatatga
     5161 ccattcgcca tcgcacccgc gaggatctca tccttactga agaagcccgc agtgaccagc
     5221 ggtagtgccg acagtgctgc gccgcccacc aggaagcaga aataaaccag cggaatagat
     5281 ttacgcagac cgcccatctt gaagatgttc tgttcgtgat ggcaggccag aatgacggaa
     5341 ccggatgcca ggaacagcag cgctttaaag aacgcgtgag tcatcaagtg gaaaatcgcc
     5401 gcatcccatg cctgcacgcc aagcgcgagg aacatgtagc caatctggct catggtagag
     5461 taagcgagaa cacgtttgat gtcggtctgt accagcgcgg caaaaccggc cagcagcagc
     5521 gtaaccgccc cgacaatgcc caccagatgc agaatttccg gcgtcatcag gaacaggccg
     5581 tgggtacggg cgatcaggta gacacccgcg gttaccatgg ttgcggcgtg gatcagcgcg
     5641 gagacaggcg tcgggcccgc catcgcgtcg gcaagccatg tctgcaacgg caactgcgca
     5701 gatttaccga ccgcaccgcc cagcagcatc agcgtcgccc acatcagcat gttattgccg
     5761 tcagcaaagt gcgctggtgc cagttccacc atttcgcgga agttcagggt gcccagttcg
     5821 ttgtaaagaa tgaacagcgc gaaagcgagg aacacgtcac ccacacgggt cacgacgaac
     5881 gctttcattg ccgctgcgcc attcttcgga tcggtgtaat agaacccgat cagcagatag
     5941 gagcacaggc ccacgccttc ccagccgagg tacatcagca gcaggttatc ggcgagaacc
     6001 agaactacca tgctggcgat gaacaggttg gtgtaggcga agaagcgaga gtagccctct
     6061 tcaccgcgca tgtaccagga ggcgtacatg tgaataagga aacccacacc agtgaccacc
     6121 gagagcatgg tcagcgacag gccgtccagc accaggttaa aaccgatgtt aaagtcgcct
     6181 accgacatcc acgtccacag cggctggctg tatgcctgct cgccgttagc gaagaaatca
     6241 acgccgataa aggcggttac cagcgccgcc aggcccacag agccaacgcc gacgatcgcc
     6301 gaaacgtttt cagaccagcg cccacgggag aacgccagca ggacgaagcc aatcaatggc
     6361 aaaataatgg ttaaggcaag catgttcatc cgcgcatctc acttactgaa tcgatgttca
     6421 ggttctggcg acgacggtga agttgcagca gcagcgcaag gccgatactc gcttctgccg
     6481 ccgcgaggct gatggcgaga atgtacatca cctgaccgtc ggtctgaccc cagtagcttc
     6541 cggcgaccac aaaggccagc gcggaggcgt taatcatgat ttccagacca atcagcataa
     6601 acagcagatt gcgacggata accagaccgg ttaagccaag aacgaataag attgccgaga
     6661 ggatcagtcc atgttgtaag gggatcatgc gtgctcctcc gtttttcttt tcgcgctgtc
     6721 gtctttacga ttgctcagca cttcacccgc acgctcttca cgaccgacgt ggaaggccac
     6781 aaccagaccc gcgagcagca gcatagaagc cagttccacc gccagtacgt aaggcccgaa
     6841 cagcgtaata cccactgctt tagcactgat tggcgtaccg tcgataccct gatcattaac
     6901 accaaggatg gcgtaaacaa tcaccaccag catgatggcc gacaaaattg ccggaccaat
     6961 ccacacctgc ggtttcagcc actggcgttc ctgttcgatt tctgaaccgc ccaggttgag
     7021 catcatcacc acgaacacga acagcaccat aatggcaccc gcgtagacga taatttccag
     7081 cgcaccggcg aagtaagcgc ccagtgagaa gaacaccccg gaaatcgcca gcagcgaaat
     7141 aatcaggtac agcagtgcgt gtaccggatt ggtatgggtg atcactcgca aggtcgcaag
     7201 tatggctatc aggccacaga tataaaaagc gaactccatt gcccctctcc ttacggtaac
     7261 aggctcttga cgtcgatagg cttggcttcg ttctctgctt cgcccttatc tttgccgtcg
     7321 attgccatac ctgccatccg gtagaagtta tattccgggt atttgcccgg accggagatc
     7381 agcagatcct ctttttcgta aaccagatcc tggcgcttgt attcccccat ttcgaaatcc
     7441 ggggttaact gaatcgccgt ggtcggacag gcttcttcgc acagaccaca gaaaatgcag
     7501 cgtgagaagt tgatgcggaa aaattccggg taccagcgac cgtctttggt ttctgctttt
     7561 tgcagcgaga tacagccgac cgggcaggct accgcgcaga ggttacaggc tacgcaacgc
     7621 tcttcgccgt ccgggtcgcg ggtcagaacg atacgaccac gataacgggg cggcagatag
     7681 accggctctt ccgggtacat tcgcgtttcg cgtttggcga acgcgtgcag gccgatcatc
     7741 cagatactac gaacctgggt gccgaaacct actaacaatt cttttaaggt catggtctta
     7801 ttgcccctta ttgcgcctgc cagagaatga cagccgccgt taccagcaag ttgatcagcg
     7861 tcagcggcag gcagattttc cagccgaagg acattacctg gtcataacgc ggacgcggta
     7921 acgacgcacg aatcaaaatg aacatcatca taaagaacgc ggttttcaac gcgaaccaga
     7981 tgaatggcgg taacaacggg ccttgccagc caccgaagaa cagcgtcaca atcaatgcag
     8041 agatggtcac aatcccgatg tactcaccca cgaagaacag accgaacttc ataccggaat
     8101 attcaatgtg gtaaccatcc gccagttcct gctcggcttc cggctggtca aacgggtgac
     8161 ggtgacatac cgccacgccc gcgatggcaa aggtaataaa accaaagaat tgcgggataa
     8221 cgttccacac atgcgcctgg ctgttgacga tgtcggtcat gttgaatgaa ccggcctgcg
     8281 ccaccacgcc catcagggaa agcccgagga acacttcgta gctcagggtc tgcgcagaag
     8341 cacgcatcgc acccagcaac gagtatttgt tgttacttga ccagcccgca aacagcaccg
     8401 cgtaaaccgc cagacctgcc atcatcagga agaacaaaat cccgatgttc aggtcggcaa
     8461 ccacccaacc cggactgact ggcacaatcg caaaggccag cagcagcgag gtaaaggcaa
     8521 tcatcggtgc cagggtaaag atgacgcgat ccgagaattt cgggatccag tcttctttaa
     8581 agaacatttt gatcatgtcc gcaaccagct ggagcgaacc gccccagcca acacggttag
     8641 gtccataacg gttctggaac agacccagca ggcgacgttc gccaaagctc atgaatgccc
     8701 cacaggtgac aaccaccagc aggatcacca ccgctttgag gatggtcagc aggatctcaa
     8761 tcagttccgg tgatatccaa ctcattgttg tgcctccttg agatcctcaa gatgcgcgcc
     8821 agccagcacc ggagcaatgc cggacatacc catcggcaag cccacctgcc ctgccgtcag
     8881 tccttcggcg atttcaaccg gcagcgtgac cgtgttgcca tcgtaactaa aggagacgcg
     8941 tgtacctgcg ttcacaccca acttcgcggc atccgctggg ttgagtttga tgtacggctg
     9001 cggcatacgg ctctggaaga ccggagcacg ctgtgacaat tcatcgctgc caaacaggtg
     9061 gtaatacggc gcaatacgcc atttcccgtc ctgcggctgg aagcgtgccg gtacgctggt
     9121 gaagtaatcc agaccattct cgctggtttc aaacagacgc acgcccggat cgccaaagcg
     9181 cagtttgccg cccacttcgt cctggaattt gttccacgcc tgcggggagt tccagcccgg
     9241 tgcccaggca aacggcactt gcgaacggtg cgcggtcggc tggttgttac cttccatcga
     9301 gaaggtgaac atggtgtcaa tatcctgcgg ctgacgcggc tcatgaacgc tgatattggc
     9361 gcgcatggcg gtacgaccgc tgtaacggtg cggttcacgg gccagtttct gcccacgaat
     9421 acggaatgtc gcatccggcg cagcatcttt gatacctgcc agttccggga ttttcgccac
     9481 aacagcgtca atcacatggt cgagctgcgt ccagtccact tcacggctca gcagggtgct
     9541 gtgcagcgag tgcagccagc gccagctttc cagcatgaca gttttgctgt cgtaataagc
     9601 cggatcgtaa acctggaaga aacgttgggc gcgaccttca ttattaatta ccgtaccgtc
     9661 gctttcagca aagctggcgg cggaaagtac cagatgggcg ttttccatga tcgctgtacg
     9721 ctgatggtca accaccatca ccagcggtgc tttagccagc gcagcattca cgcgggtagc
     9781 agaagcgtga cgatgcagat cgttttccaa caccaccacc gcgtcggcgc gtccggtttc
     9841 cagttcggtt aacgcttctt caagcgaacc gccacccata atgcccagcc ccatgctgtt
     9901 gacggaacgg gcaatcatgg tgataccgac gtcagcgccg cgacctttca gggctttcgc
     9961 gacgttagcc gccgcctgaa tcacctctaa gctaccggcg ttcgtcccgg agataatcaa
    10021 cggtttcttc gcacctgcca gtgcctgcac gatgacgtcg attttgcttt gcagctcagg
    10081 ttcgataccg tcaaccgctg gtgcagagtt atccagcgca tgggcgatgg caaaacctaa
    10141 acgcgcctga tcttcaaccg gtgcgcggta agtccacgcc gcgatatcat ccaaacgggt
    10201 gtcatcaacg ttggtaacaa acagcggatg cttcgcacgt tgaccgatgt taaggattgc
    10261 cgcaatctgc cagtcagcca ctttctgtgc tgccgccatt tcgcgcgctt tacctttcac
    10321 cgcctgacgc actgccagcg cgacgcgcgc gccggtctgg gtaacgtctt cgcccagcac
    10381 cagtaccgca tcgtaagatt cgatttcgcg cagagccgga gtataaatgc cgccttcacg
    10441 cagcactttc agcgccagtt gcagacgttc ctgctcaccg tgagcgatac cggtgtagaa
    10501 gttttcttcg cccaccagtt cacgcagtgc aaagttgctt tccacgctgg cacgcggaga
    10561 accaataccg atcactttct tcgactgacg cagaatatct gccgcgccct gcattgcctg
    10621 ttcggcgttg agggtaatga aatcatcgcc acgacgctgt actggctgac gcggacgatc
    10681 cttcaggttg acgtaaccgt aaccgaaacg accacggtcg cagaggaagt agtggtttac
    10741 cgtaccgttg taacggtttt cgatacgacg cagttcgccg taacgttcac cggggctgat
    10801 gttacagccg atggaacatt gctggcagat gctcggcgca aactgcatat cccatttacg
    10861 gttgtaacgc tcggagtgcg ttttgtcggt aaatacgccg gtcgggcaaa tttcgaccag
    10921 gttaccggaa aattcgcttt ccagcgtgcc gtcttccggg cgaccgaagt agacgttgtc
    10981 gtgcgcgcca taaacgccca gatctgtacc gtcagcgtaa tctttgtagt aacgcacaca
    11041 gcggtagcag gcgatgcagc ggttcatttc gtgagatatg aatggcccca aatcctgatt
    11101 acggtgggta cgtttggtga aacggtagcg acggaagctg tgtccggtca tcacggtcat
    11161 atcctgaaga tggcagttac cgccttcttc acataccgga cagtcgtgcg ggtggttggt
    11221 cattaaccac tcgaccacac tttcacggaa ctgtttcgct tcttcgtcgt caatggaaat
    11281 aaaggtgcca tcggaagccg gtgtcataca ggacatcacc aggcgaccac gcgtgtcttc
    11341 cgcgttttgg tattgcttca ccgcacactg gcggcaagca ccgacgcttc ccagcgccgg
    11401 atgccagcaa aagtaaggaa tatcaaggcc cagagacaga caagcttcca gcaggttgtc
    11461 cgctccgttg acctcgtatt ctttgccgtc tacatgaatt gtagccatta gcatgcttcc
    11521 agttttctcg gtcagggacc gagcgttaat cgaaattcgg ttaccagcgc tctttcagca
    11581 ggttcggctg aatcccatta atcaaatggg tattgctgaa cggctgtttg attcccgcct
    11641 caaattcttc gcggaaatat ttgatggcgc tctgtaacgg ctccactgca ccaggtgcgt
    11701 gggcacagaa agttttaccc gggcctaaga atcgacacag ttgctcaagt gtttcaatat
    11761 cgcccggctg gccttcgcca cgctccagcg cacgcagaat tttcacgctc cacggcagac
    11821 cgtcgcggca cggcgtacac cagccgcagg actcacgggc gaaaaactct tccaggttac
    11881 gcaccagcga caccatgttg atctcatggt caaccgccat cgccagcgcc gtacccagac
    11941 ggctgcccgc tttaccgata ctttcgaatt ccatcggcag atcaaggtgc gcttcggtca
    12001 ggaagtcagt ccccgcgccg cctggctgcc aggctttaaa tttcagacca tcacgcatac
    12061 caccggcgta atcttcgagg atctcgcgtg cggtggtgcc gaacggcagt tcccacagtc
    12121 ccggattttt cacccgaccg gagaagccca tcagcttggt gccagcatct ttacttttcg
    12181 agatgttctg ataccactcc acgccgttag cgaggatcgc cggaacgtta cacagggttt
    12241 cgacgttgtt gacacaggtc ggtttgcccc atacgccgga ggttgccggg aaggggggtt
    12301 tcgagcgtgg gttagcacga cgcccttcta gggagttgat taacgctgtt tcttccccgc
    12361 agatgtagcg ccctgccccg gtatggacga acagttcgaa gtcgaaacct gttcccataa
    12421 tgtttttgcc aagcaagccc gcttcagtgg cttcggcaat ggcgcggcgc agatttactg
    12481 ccgcttcgat atattcgcca cgcaggaaga tgtagccacg gtaagctttc agcgcaaacg
    12541 cggagatgag cataccttcc accagcaggt gcggcagttg ctccatcaac aggcggtctt
    12601 tataggtgcc cggctccatt tcatcggcgt tacacagcag gtaacggatg ttcatggatt
    12661 cgtctttcgg catcaggctc cacttcaggc cagtagaaaa gcccgctccg ccgcgccctt
    12721 tcagaccagc gtcttttacc tgattaacga tttcgtccgg agacagcccg gtcagcgcct
    12781 tacgcgcccc ttcgtaaccg tttttgctgc ggtattcgtc cagccacact ggctgtttgt
    12841 catcgcgcag acgccaggtc agcggatgcg tttcgggagt acggataatg tttttcattt
    12901 ataccgctcc agcagttcag ggatcgcttc cggggtcaga tgcgcgtgag tgtcctcatc
    12961 gatcatcatg tttggccctt tatcacagtt ccccaggcag caagttggca gcagcgtaaa
    13021 gcggccatca aatgtcgttt gccctggttt gatgttcagc tttttctcga gcgccgcctg
    13081 aataccctga tacccgttga tatgacagac cacgctgtcg caataacgga tcacatggcg
    13141 accaaccggc tggcggaaga tctgactgta gaacgttgcc acaccttcga cgtcgcttgc
    13201 cggaataccc agcacatcgg cgatcgcgtg gatcgcacca tccggcaccc agccacgctg
    13261 cttctgaacg attttcagcg cttcaatgga cgccgcacgc gggtcttcgt agtggtgcat
    13321 ctcgtgctca atcgcttcac gctctgccgc actcagctca aaagcctcgg tttgtggttg
    13381 ttgattctcg tgcataatta gcggtccaca tctgacataa caaaatcgat actgcccaga
    13441 taaacaatca ggtcagacac caggctgccg cggatcgccg ccggaatttg ctgcaaatgc
    13501 gcataactcg gcgtgcggat acgagtgcga taactcatgg tgctaccgtc gctggtcagg
    13561 tagtaactgt tgatcccctt ggtcgcctca atcatctgga aagattcatt ggcaggcatc
    13621 accggccccc acgacacttg caggaagtgg gtgatcaggg tttcgatatg ttgcagcgtg
    13681 cgctctttcg gcggcggcgt ggtcagcggg tgatccgctt tgaacgggcc ttccggcatg
    13741 ttgttgaggc actgctcaag aatgcgcaga ctctggcgca gctcttccac tttcagcatt
    13801 acgcgggtgt agcagtcaga aacaccacca ccaaccggga tttcaaagtc gaagttttca
    13861 tagccagaat aaggacgcgc cttacgcacg tcgaagtcga tcccggtagc acgcaggccc
    13921 gcgccagtgg tgccccactc cagcgcctct ttcgcgccat aggcggcaac gccctgggaa
    13981 cgacctttca gaatggtatt ttgcagcgcc gctttctcgt aagacgccag acgtttcggc
    14041 atccagtcga ggaactcacg cagcaggcga tcccagccgc gcggcaggtc gtgcgctacg
    14101 ccgccaatac ggaaccacgc cgggtgcata cggaaacccg tgatcgcttc caccagatcg
    14161 taaattttct gacgatcggt aaaggcgaag aacacgggcg tcattgcgcc gacgtcctga
    14221 ataaaggtcg agatgtacag caggtggctg ttgatacgga acagttcgga gagcataacg
    14281 cgaatgacgt taacgcgatc cggcacggtg atcccggcca gtttctctac cgccagcacg
    14341 taaggcattt cgttaacgca gccgccgagg tattcaatac ggtcggtata cggaatgtag
    14401 ctgtgccagg actggcgctc gcccattttc tccgcaccac ggtggtggta gccgatgtct
    14461 ggtacgcagt cgacaatctc ttcgccgtcg agttgtaaaa cgatacggaa agccccgtgc
    14521 gccgacgggt ggttcggacc gaggttgagg aacatgaagt cctcgttttc ggtgccgcgc
    14581 ttcatccccc actcttccgg tttgaaggtc agggcttcca tctccagatc ctgtttggct
    14641 ttggtcagct caaacggcga gaattcggta gcgcgcgccg ggtaatcttt acgcagcggg
    14701 tgacctttcc aggtttgcgg catcatgatg cggcgcaggt tcgggtgacc gtcgaaagta
    14761 atgccaaaca gatcccaggt ttcacgctca taccagttag cgttcgggaa cagtttggtg
    14821 aaggtcggta cgtgcaggtc gttttctgcc agcgccacct tcagcatgat gtcgcggtta
    14881 cgatcgatag aaatcagatg gtagaaaacg gaaaaatccg cggcaggtaa cccttcgcgg
    14941 tgtgtgcgca gacgttcgtc catgccgtgt aagtcaaaca gcatgacgta aggtttcggc
    15001 agtttcttta agaaatcgcc aacttccagt aattgttcac gcttgatcca cacaacggga
    15061 accccggtgc gagtcgcctg aacagtaaag gcatccggcc caaaacggtt gcgcagttcg
    15121 ccaattaccg gatcatcaag atgatcgcgg gtctgccagg cgggttcttg cgcggttaag
    15181 tcggtcatat tgttcaccat tgcaaatggt ccgtggtgac tgtcggcgca gtaagcttcg
    15241 cgaaatagat ttaggaataa gcgaagaaaa atccctttgc cgacaggcgc aaattaaatc
    15301 tcgtcaggtg tacgcaggtt ggttacggca atgcgttcac cgcgcttgcg ttcgcgctct
    15361 gattgcatat tggcgcgata aacgccctga tcgccaacca cccaggagag cggacgacgt
    15421 tctttgccga tagattcctg caacagcatc agtgcctgca tgtacgcttc aggacgcggc
    15481 gggcagcccg ggatatacac atcaaccggg atgaatttat cgacgccctg cacaacggaa
    15541 taaatatcgt acataccacc agagttggca caggcaccca ttgagataac ccattttggt
    15601 tccagcatct ggtcatacag acgctgaata accggtgcca ttttggtaaa gcaggttcct
    15661 gcaaccacca tcaggtcagc ctgacgcggc gaagcacgca atacttctgc gccaaaacgc
    15721 gccacgtcat gcaccgcggt aaacgaagtc accatctcaa cgtaacagca ggaaagaccg
    15781 aagttatacg gccaaattga gtttttacga ccccagttaa ccatgtcatt gagcttgccc
    15841 ataaacacgt ttttgttaac ttcttgctcc agagggtcgg ttacgatctc ctgcttttgc
    15901 agggggtaac ggtcgttctc accgttggga tctatgcggg tgagcgtata atccatctta
    15961 atgcctcgcg gttagcgttg acgattagcg atactgttcg tttccgggtt catacgctcg
    16021 cggcgtgaac gcgcgggcgt ccagtccagc gcgccaatac gcaccagata aaccagacct
    16081 gccagtaaca caaaaataaa aattgcagct tccacaaagc ctacccagcc gctttcgcgg
    16141 atagaggttg accatgcgaa cagatacagc gcttcaacgt cgaagataac gaagaacatg
    16201 gccaccagat aaaacttggc ggacaggcgt aagcgggcgg agccgaccga gtcgataccg
    16261 gattcaaacg gcacgttttt cgacctcgcg cgtgcgcgac cgcctaaaaa ccaaccacct
    16321 accagcatta ggcaacacag gccaatggca acgataagaa agatagcgaa tgcccagtga
    16381 tgagcgatga cttcagtgga tgttgacata ctcattgctt actcatcaaa agtagcgcca
    16441 gattcactgc tcttcacggc agatggacgc cacatcgatt catggggagg aataaaaaaa
    16501 accttacaat cactgtagaa attcttttat acagctaatt gatgtggtct tttactcctt
    16561 tctataacct tttgtcaact ttaacaaaag tttcttcaca ttagtttaca taatatcaac
    16621 accattagca tttaatgccc tttcacccca gatccttgac gactccagga taattagatg
    16681 ttgttgaatc gtgtccgttg tgaagcaatg gaaaaaatac gggtctattt tgacaggaat
    16741 ttgtgtcgat tcctcccccc aaaagagagt attttcttga tctgtgacac gcttttgtca
    16801 ttccataaca aaaacgcagc aacaaattta cgtatttttt aacatcattg tagcaggtga
    16861 tttttttcag gcgattattt gtgcgttcgg gacgtgaatc tctggtgatt gaaaaatgaa
    16921 cagttttgta cgttctgcac tatgcgagga aggattttta ctaaaaaaaa gccgctgggg
    16981 tttaaaacac ccccagcggc tcgtttttta cactattgtc tcaggaatta tctatcgtcc
    17041 gtcgattact cgatatccct ttcaatcaac aatgaatcat ccccttccgg agcagacatt
    17101 gggctgtatt gccacggatt atggtagctc tccatcgcct gatagatcac ctgggccagc
    17161 tcattattac tggacgggtc atagcacagc aaatattcgg tatcaggtag cggcggtaag
    17221 ccatctactc cactcagcac acgcaggtcc gggctcatca tctcaaccgg ccttgccgtc
    17281 acgccaagac cggctttcac tgccgcacga acggccggaa gcgtcgaggc gacataagcc
    17341 agtcgccatg gaatatctgc tttattaagc gttgccagca ccatatcgcg aaacggactt
    17401 ggatcatcca gcaatacaag agggatcggc tcgccttttt gcaatacgta ttccgctgcg
    17461 cagtaccagt gtgttggcga ggtacgcagg ttcaatgcct taaacgctga aggacgatgg
    17521 gtggttacca tcaaatccac ttcctgggat tccagcattt ctgccatata ggcattacgt
    17581 ttaacgcgga catccagcgc taatttcgga taaaccgaac tcacgcgatt taacaggaaa
    17641 ggtaagatcg tatcggcaga ttcatctgaa gcaccgatag ttaacacgcc ctgaagatta
    17701 ctgaacatta atgatgagca ggcctcatca ttaaaacgca ggattttcct ggcgtaacca
    17761 agaagttgaa tgccatgttc agttaacagt ttgttgcgac cgtgacgagc gaacagttct
    17821 ttcccaacga gttgttccag acgctgcatt tgctgactta cggcggactg agtacgacac
    17881 acagcggcag ctgcggcagc aaaagtgttc agatcggcaa cagcaacaaa tgttctcagc
    17941 agatcgaggt cgaggttaat tatcggacga tttgcactta tcatatatta tcacttactg
    18001 gcggctcata ctgagctggt taatgctgtg cacacacaaa caagcaattc catttgtaat
    18061 gtgcctccct ggcagtttca tccggaaccc ggacgaaagt aaaaatgcat atgagttgca
    18121 ctaaaaaagc gactcacatt gttccgttat aatgcctgaa gtagatcaca gaatatatct
    18181 tcagggatcg catatctatt aagttactca ctcttttcta tttatgacat gcgcgtgttt
    18241 gtataaatgt aaatgtgagt ccttgttcca ctctcgtgca gcatcgctgg tcatacgcga
    18301 acacgtacaa acagcaatgg tgaggcggca tcaagagcag ggatccgtca tttatgcgag
    18361 cattttaccc caaaaacctt ttatttataa gggccattgc gaatcatctg atgcaaagtt
    18421 atgttatgtt aggcaaagta atcttctatt attaataagc acatcaaaac ctttttgaat
    18481 attaaataat aattaattag catcatcctc attcattaat tccgcttaac aatagtttca
    18541 caccttgccc cattacgaca cctcggaaat catcacgctg ttaaactctc cgtaatgcgg
    18601 aaatatcatc atcgcgtttc attagtgaat tcttaaatga ggcattttca cacaattatc
    18661 ttacagataa aaaaaccaga cttacaatta agaatcagaa caattcacta tataacattg
    18721 catgtaaagc atatacacct cattattttg tcatcattaa gttattaaca gcacaatcga
    18781 gccttcccct ctggcaaaat cttattctgc agaccttcaa aacaccgtcc tgggggagta
    18841 cattgttcta agctgacttc cacggcaggg agtggcgata acagcaaaaa aggtcaagat
    18901 tcatgtcccc cattgaaaaa tccagcaaat tagagaatgt ctgttatgac atccgtggtc
    18961 cggtgctgaa agaagcaaaa cgcctggaag aagaaggtaa caaggtactg aaactgaaca
    19021 tcggcaaccc agccccgttc ggttttgacg cgccagatga aatcctcgtt gacgtgatac
    19081 gcaacctgcc taccgctcaa gggtattgcg attccaaagg tctttactcc gcgcgtaaag
    19141 ccatcatgca gcactaccag gctcgtggca tgcgtgatgt taccgtggaa gatatttaca
    19201 tcggcaatgg tgtatcggag cttatcgttc aggcaatgca ggcattgctg aacagcgggg
    19261 acgaaatgtt ggttcctgca ccagattacc cactatggac cgcggcggtt tcgctttcca
    19321 gcggtaaagc ggtgcattat ctttgcgatg aatcctctga ctggttcccg gacctcgatg
    19381 atattcgcgc taaaattacg cctcgtacgc gtgggatcgt tattatcaac ccaaataacc
    19441 caaccggcgc ggtatattcc aaagagcttt taatggagat tgtggagatt gcacgtcagc
    19501 ataatctcat tatcttcgcc gatgaaattt atgacaaaat tctttacgac gacgctgagc
    19561 atcactcaat tgcgccgctg gcacctgacc tgctgaccat tacctttaac ggactgtcga
    19621 aaacgtaccg cgttgcaggc ttccgtcagg ggtggatggt gttgaacggg ccgaaaaaac
    19681 acgccaaagg ctacatcgaa ggtctggaaa tgctggcttc aatgcgcctg tgtgctaacg
    19741 ttcctgcgca acacgccatt cagaccgcgc tgggtggtta tcagagcatc agtgaattta
    19801 ttacccctgg cggtcgtctt tatgagcagc gtaaccgcgc gtgggaactg atcaacgata
    19861 ttccgggcgt ttcctgcgtg aaacctcgtg gtgcgctgta tatgttcccg aaaatcgacg
    19921 ccaaacgctt taacattcac gacgatcaga aaatggtgct ggatttcctg ttgcaggaaa
    19981 aagttctgtt ggtgcaaggg acggcattca actggccgtg gccggatcac ttccgcattg
    20041 tcacgctacc gcgtgtcgat gatatcgagc tgtctttgag caagttcgcg cgtttccttt
    20101 ctggttatca tcagctgtaa tcttaatttc actgccggag attgcatccg gcagcgttat
    20161 cccgccacaa tgacctgatg atgtcatcat acgtaaggtc actatgaaac agagccattt
    20221 ttttgcccat ctctcccgcc tgaaactcat taaccgctgg ccgctaatgc gcaacgtgct
    20281 gacggaaaat gtgtccgaac acagtttgca ggtagcgatg gtcgcccatt cgctggcagc
    20341 tatcaaaaat cgaaaatttg gcggtaatgt caacgccgaa cgtatcgctt tactggcgat
    20401 gtaccacgat gcctcagaag tgccaccggc gatctcccta ctccggtgaa atacttcaat
    20461 tcgcaaatcg ctcaggagta caaggctatt gaaaaaatcg ctcagcaaaa actggtcgat
    20521 atggttccgg aagagctgcg ggatatcttt gcgccgttaa ttgacgagca tgcatatagc
    20581 gatgaagaaa aatcgctggt gaaacaggca gatgcactgt gtgcatatct gaaatgtctg
    20641 gaagaactcg cggccggaaa taatgaattc ttgctggcaa aaacgcgact ggaagcgacg
    20701 cttgaagcgc gtcgcagcca ggagatggac tacttcatgg aagtatttgt tcccagcttc
    20761 catctttcgc tcgatgagat tagccaggat tcaccgctgt aagcagccgg agtctgcgtc
    20821 gcatcaggca ataagcgccg gatgcgacat caggctcttg tcaaaacgga aacagcatcg
    20881 ggatcatcac cacacaaacc gccatcacga taatggtgaa cggtaccccc aacttcacaa
    20941 agtcactgaa gctgtaattt cccggaccta aaaccagtgt gttaacaggt gaagaaaccg
    21001 gtgtcataaa ggcggcggat gctgccatcg ccacgaccat cgcgaatgga taaggcgaca
    21061 cccccatcgt tttggcagca gccagcgcaa tcggagccat caacaccgcc gtcgcggtat
    21121 tagagataaa tagcccaata accgccgaca agacaaacaa acaccccagc atcatatgtg
    21181 gcccgtaacc accgccaatg tccatcagcc ctttcaccgc cagcgcgaca cctcccgttt
    21241 tctgtaatgc cacagcaaac ggcatcatcc caacgatcaa aataatgctc ggccagtgaa
    21301 tggatttata ggcgctttca gcatctatac agcggaattt ccccatcagc aggcaggcga
    21361 tgatagcggc aacaggatta ggaatttcat ctgtcagcat taacgccacc attagcacca
    21421 gacagaaaat ggcatggggt gcctggctgt gcgcgggcga tgcttcactc acctcttccg
    21481 gtaagttcag cgctacgaag tcgcggccct gtttggccag cataccgatc agtttccagt
    21541 tacccacaac caggatgata tcgcccagca gcagaggctc atccgccagc gaaccttcca
    21601 gcgccacgcc attgcgcttt agccccacca cattcagtcc gtagcgggta cgaaaaccaa
    21661 tttcgcgcac cgatttacca atcagttctg actcaggaat taatgaaatc tctgccatgc
    21721 ccacatcaag ggcctggtca gaaaaatact cgccgcgcag taccatcggc tccagcaatt
    21781 gctcactaca aaattgccgg agatcgacat cagccgcaga catatcaata agcaaaacgt
    21841 cacgcgcgcg aaattcagaa accccattaa cgttcacgat aacgcgacga aaacgccgcc
    21901 agcgttcaac accgatgacg ttagcgccat aacgctcacg taatttgaga tcatccagcc
    21961 gttgaccaat cattggcgat ccggggcgaa tagccagacg tcgcgcacgc ccggtcagtc
    22021 gatattcacg gataagatcg cgaaaggttc gacgcgtcca gccttcgcgc tgcggggtct
    22081 gggtatcccc tttcagcatg aaacgcatca ctaacatata caaaataccc agcaccagca
    22141 cgaccaggcc aacaggtgtt acgctaaaga aactgaagcc gtgatagcct tcacgcagca
    22201 attcactgtt gactaccagg ttcggcggcg tcgccaccag cgtcatcatg ccgctaatca
    22261 gcccggcaaa acttaacggc atcatcagac gtgacggcga agtttgcata cgcatggcaa
    22321 cgcttaacac cacgggaata aagatagcga caacgccggt tgaactcata aacgcgccaa
    22381 gccccgcgac ggtcagcatc aacaaaacca acattttgat ttcactgttg cccgccactt
    22441 tgaccagcca tgttcccatt acggtggcaa caccggtacg gaccaaacca tcgccaataa
    22501 taaacaaggc ggcaatcagg acaacgttag gatcagaaaa gccggaaaat acttcgggga
    22561 ccgtcagcgt tccgcttaat gcaaacgcga caataacaaa caaagcgacc gcatccatac
    22621 gcactctgcc cgtcgcaaac aagacgatgg caacggccag taatgaaaga acccaaatca
    22681 attcaccgtt cacaacttat ccttgttaat tgagggggat gacttgattc tgccataaaa
    22741 aagccccgac gagacggggc taaatcat
//
LOCUS       DADMJE010000057        22588 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.058, whole genome shotgun sequence.
ACCESSION   DADMJE010000057 DADMJE010000000
VERSION     DADMJE010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22588)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22588)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22588
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.058"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..257)
                     /locus_tag="JN001_001962"
     CDS             complement(<1..257)
                     /locus_tag="JN001_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY9053205.1"
                     /translation="MPVKEQGFSLLEVLIAMAISSVLLLGAARFLPALQRESLTSTRK
                     LALEDEIWLRVFTVAKHLQRAGYCHGICTGEGLEIVGQGDC"
     gene            complement(248..718)
                     /locus_tag="JN001_001963"
     CDS             complement(248..718)
                     /locus_tag="JN001_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
                     /protein_id="HAY9053206.1"
                     /translation="MKTQRGYTLIETLVAMLILVMLSASGLYGWQYWQQSQRLWQTAS
                     QARDYLLYLREDANWHNRDHSISVIREGTLWCLVSSAAGANTCHGSSPLVFVPRWPEV
                     EMSDLTPSLAFFGLRNTAWAGHIRFKNSTGEWWLVVSPWGRLRLCQQGETEGCL"
     gene            complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JN001_001964"
     CDS             complement(903..1697)
                     /gene="thyA"
                     /locus_tag="JN001_001964"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HAY9053207.1"
                     /translation="MKQYLELMQKVLDEGTQKNDRTGTGTLSIFGHQMRFNLQDGFPL
                     VTTKRCHLRSIIHELLWFLQGDTNIAYLHENNVTIWDEWADENGDLGPVYGKQWRAWP
                     TPDGRHIDQITTVLNQLKNDPDSRRIIVSAWNVGELDKMALAPCHAFFQFYVADGKLS
                     CQLYQRSCDVFLGLPFNIASYALLVHMMAQQCDLEVGDFVWTGGDTHLYSNHMDQTHL
                     QLSREPRPLPKLIIKRKPESIFDYRFEDFEIEGYAPHPGIKAPVAI"
     gene            complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JN001_001965"
     CDS             complement(1704..2579)
                     /gene="lgt"
                     /locus_tag="JN001_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HAY9053208.1"
                     /translation="MTSSYLHFPEFDPVIFSIGPVALHWYGLMYLVGFIFAMWLATRR
                     ANRPGSGWTKNEVENLLYAGFLGVFLGGRIGYVLFYNFPQFMADPLYLFRVWDGGMSF
                     HGGLIGVIVVMIIFARRTKRSFFQVSDFIAPLIPFGLGAGRLGNFINGELWGRVDPNF
                     PFAMLFPGSRTEDILLLQTNPQWQSIFDTYGVLPRHPSQLYELLLEGVVLFIILNLYI
                     RKPRPMGAVSGLFLIGYGAFRIIVEFFRQPDAQFTGAWVQYISMGQILSIPMIVAGVI
                     MMVWAYRRSPQQHVS"
     gene            complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JN001_001966"
     CDS             complement(2730..4976)
                     /gene="ptsP"
                     /locus_tag="JN001_001966"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HAY9053209.1"
                     /translation="MLTRLREIVEKVASAPRLNEALNILVTDICLAMDTEVCSVYLAD
                     HDRRCYYLMATRGLKKPRGRTVTLAFDEGIVGLVGRLAEPINLADAQKHPSFKYIPSV
                     KEERFRAFLGVPIIQRRQLLGVLVVQQRELRQYDESEESFLVTLATQMAAILSQSQLT
                     ALFGQYRQTRIRALPAAPGVAIAEGWQDATLPLMEQVYQASTLDPALERERLTGALEE
                     AANEFRRYSKRFAAGAQKETAAIFDLYSHLLSDTRLRRELFAEVDKGSVAEWAVKTVI
                     EKFAEQFAALSDNYLKERAGDLRALGQRLLFHLDDANQGPNAWPERFILVADELSATT
                     LAELPQDRLVGVVVRDGAANSHAAIMVRALGLPTVMGADIQPSVLHRRTLIVDGYRGE
                     LLVDPEPILLQEYQRLISEEIELSRLAEDDVNLPAQLKSGERIKVMLNAGLSPEHEEK
                     LGSRIDGIGLYRTEIPFMLQSGFPSEDEQVAQYQGMLQMFNDKPVTLRTLDVGADKQL
                     PYMPISEENPCLGWRGIRITLDQPEIFLIQVRAMLRANAATGNLNILLPMVTSLDEVD
                     EARRLIERAGREVEEMIGYEIPKPRIGIMLEVPSMVFMLPHLAKRVDFISVGTNDLTQ
                     YILAVDRNNTRVANIYDSLHPAMLRALAMIAREAEIHGIDLRLCGEMAGDPMCVAILI
                     GLGYRHLSMNGRSVARVKYLLRRIDFAEAENLAQRSLEAQLATEVRHQVAAFMERRGM
                     GGLIRGGL"
     gene            complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JN001_001967"
     CDS             complement(4989..5519)
                     /gene="rppH"
                     /locus_tag="JN001_001967"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001655775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HAY9053210.1"
                     /translation="MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGE
                     SAEQAMYRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWFLL
                     QLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKEFASVVMSLQE
                     NTPKPQNTSAYRRKRG"
     gene            6204..6893
                     /gene="mutH"
                     /locus_tag="JN001_001968"
     CDS             6204..6893
                     /gene="mutH"
                     /locus_tag="JN001_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutH"
                     /protein_id="HAY9053211.1"
                     /translation="MSQPRPLLSPPETEEQLLAQAQQLSGYTLGELAALAGLVTPENL
                     KRDKGWIGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPLTG
                     NSGVTWETSHVRHKLKRVLWIPVEGERSIPLAQRRVGSPLLWTPNEEEDRQLREDWEE
                     LMDMIVLGQVERITARHGEYLQIRPKAANAKALTEAIGARGERILTLPRGFYLKKNFT
                     SALLARHFLIQ"
     gene            6962..7675
                     /locus_tag="JN001_001969"
     CDS             6962..7675
                     /locus_tag="JN001_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HAY9053212.1"
                     /translation="MLFAWITDPNAWLALGTLTLLEIVLGIDNIIFLSLVVAKLPTAQ
                     RAHARRLGLAGAMVMRLALLASIAWVTRLTNPLFTIFSQEISARDLILLLGGLFLIWK
                     ASKEIHESIEGEEEGLKTRVSSFLGAIVQIMLLDIIFSLDSVITAVGLSDHLFIMMAA
                     VVIAVGVMMFAARSIGDFVERHPSVKMLALSFLILVGFTLILESFDIHVPKGYIYFAM
                     FFSIAVESLNLIRNKKNPL"
     gene            7813..8031
                     /gene="ygdR"
                     /locus_tag="JN001_001970"
     CDS             7813..8031
                     /gene="ygdR"
                     /locus_tag="JN001_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YgdR"
                     /protein_id="HAY9053213.1"
                     /translation="MKKWAVIISAVGLAFAVSGCSSDYVMATKDGRMILTDGKPEIDD
                     DTGLVSYHDQQGNAMQINRDDVSQIIER"
     gene            8139..9179
                     /locus_tag="JN001_001971"
     CDS             8139..9179
                     /locus_tag="JN001_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(H)-dependent aldo-keto reductase"
                     /protein_id="HAY9053214.1"
                     /translation="MQYHRIPHSSLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGI
                     NLIDVAEMYPVPPRPETQGLTETYVGNWLAKHGSREKLIIASKVSGPSRNNDKGIRPD
                     QALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDT
                     LDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPSIVTIQNPYSLLNRSFEVG
                     LAEVSQYEGVELLAYSCLGFGTLTGKYLNGAKTAGARNTLFSRFTRYSGEQTQKAVAA
                     YVDIARRHGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLHLELSEDVLAEI
                     EAVHQVYTYPAP"
     gene            complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JN001_001972"
     CDS             complement(9211..10404)
                     /gene="lplT"
                     /locus_tag="JN001_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipid transporter LplT"
                     /protein_id="HAY9053215.1"
                     /translation="MSESVHTNTSLWSKGMKAVIVAQFLSAFGDNALLFATLALLKAQ
                     FYPEWSQPILQMVFVGAYILFAPFVGQVADSFAKGRVMMFANGLKLLGAASICFGINP
                     FLGYTLVGVGAAAYSPAKYGILGELTTGSKLVKANGLMEASTIAAILLGSVAGGVLAD
                     WHVLVALAACALAYGGAVVANIYIPKLAAARPGQSWNLINMTRSFLNACTSLWRNGET
                     RFSLVGTSLFWGAGVTLRFLLVLWVPVALGITDNSTPTYLNAMVAIGIVVGAGAAAKL
                     VTLETVSRCMPAGILIGVVVLIFSLQHELLPAYALLMLIGVMGGFFVVPLNALLQERG
                     KKSVGAGNAIAVQNLGENSAMLLMLGIYSLAVMVGIPVVPIGIGFGALFALAITALWI
                     WQRRH"
     gene            complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JN001_001973"
     CDS             complement(10397..12556)
                     /gene="aas"
                     /locus_tag="JN001_001973"
                     /EC_number="2.3.1.40"
                     /EC_number="6.2.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acyl-ACP--phospholipid
                     O-acyltransferase/long-chain-fatty-acid--ACP ligase"
                     /protein_id="HAY9053216.1"
                     /translation="MLFSFFRNLCRVLYRVRVTGDTQALKGERVLITPNHVSFIDGIL
                     LGLFLPVRPVFAVYTSISQQWYMRWLKSFIDFVPLDPTQPMAIKHLVRLVEQGRPVVI
                     FPEGRITTTGSLMKIYDGAGFVAAKSGATVIPVRIEGAELTHFSRLKGLVKRRLFPQI
                     TLHILPPTQVAMPDASRARDRRKIAGEMLHQIMMEARMAVRPRETLYESLLSAMYRFG
                     AGKKCVEDVNFTPDSYRKLLTKTLFVGRILEKYSVEGERIGLMLPNAGISAAVIFGAI
                     ARRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLE
                     DLKADVTTADKVWIFAHLLMPRLAQVKQQPEEEALILFTSGSEGHPKGVVHSHKSILA
                     NVEQIKTIADFTTNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPEL
                     VYDRSCTVLFGTSTFLGHYARFANPYDFYRLRYVVAGAEKLQESTKQLWQDKFGLRIL
                     EGYGVTECAPVVSINVPMAAKPGTVGRILPGMDARLLSVPGIEEGGRLQLKGPNIMNG
                     YLRVEKPGVLEVPTAENVRGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMV
                     SLEMVEQLALGVSPDKVHATAIKSDASKGEALVLFTTDNELTLDKLQQYAREHGVPEL
                     AVPRDIRYLKQMPLLGSGKPDFVTLKSWVDEAEQHDE"
     gene            12945..13976
                     /gene="galR"
                     /locus_tag="JN001_001974"
     CDS             12945..13976
                     /gene="galR"
                     /locus_tag="JN001_001974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalR"
                     /protein_id="HAY9053217.1"
                     /translation="MATIKDVARLAGVSVATVSRVINNSPKASEASRLAVHSAMESLS
                     YHPNANARALAQQTTETVGLIVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQ
                     KERQAIEQLIRHRCAALVVHAKMIPDADLASLMKQMPGMVLINRILPGFENRCIALDD
                     RYGAWLATRHLIQQGHTRIGYLCSNHSISDAEDRLQGYYDALAESGIAANDRLVTFGE
                     PDESGGEQAMTELLGRGRNFTAVACYNDSMAAGAMGVLNDNGIDVPGEISLIGFDDVL
                     VSRYVRPRLTTVRYPIVTMATQAAELALALADNRPLPEITNVFSPTLVRRHSVSTPSL
                     EASHHATSD"
     gene            complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JN001_001975"
     CDS             complement(13983..15245)
                     /gene="lysA"
                     /locus_tag="JN001_001975"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HAY9053218.1"
                     /translation="MPHSLFSTDTDLTAENLLRLPAEFGCPVWVYDAQIIRRQIAALK
                     QFDVVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTAD
                     VIDQATLERVSELQIPVNAGSVDMLDQLGQVSPGHRVWLRVNPGFGHGHSQKTNTGGE
                     NSKHGIWYTDLPAALDVIQRHHLQLVGIHMHIGSGVDYAHLEQVCGAMVRQVIEFGQD
                     LQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHLGHPVKLEIEPGRFLVAQ
                     SGVLITQVRSVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVE
                     TVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRSLL
                     PEVLFDNGQARLIRRRQTIEELLALELL"
     gene            15367..16302
                     /gene="lysR"
                     /locus_tag="JN001_001976"
     CDS             15367..16302
                     /gene="lysR"
                     /locus_tag="JN001_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator LysR"
                     /protein_id="HAY9053219.1"
                     /translation="MAAVNLRHIEIFHAVMTAGSLTEAAHLLHTSQPTVSRELARFEK
                     MIGLKLFERVRGRLHPTVQGLRLFEEVQRSWYGLDRIVSAAESLREFRQGELSIACLP
                     VFSQSFLPQLLQPFLARYPDVSLNIVPQESPLLEEWLSAQRHDLGLTETLHTPAGTER
                     TELLSLDEVCVLPPGHPLAVKKVLTPDDFQGENYISLSRTDSYRQLLDQLFTEHQVKR
                     RMIVETHSAASICAMVRAGVGVSVVNPLTALDYAASGLVVRRFSIAVPFTVSLIRPLH
                     RPSSALVQAFSEHLQAGLPKLVTSLDAILSSATTA"
     gene            complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JN001_001977"
     CDS             complement(16289..16981)
                     /gene="ygeA"
                     /locus_tag="JN001_001977"
                     /EC_number="5.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid racemase"
                     /protein_id="HAY9053220.1"
                     /translation="MKTIGLLGGMSWESTIPYYRLINEGIKQRLGGLHSAQVLLHSVD
                     FHEIEECQRRGEWDKTGDILAEAALGLQRAGAEGIVLCTNTMHKVADAIESRCTLPFL
                     HIADATGRAITGAGMTRVALLGTRYTMEQDFYRGRLTEQFSINCLIPEADERAKINQI
                     IFEELCLGQFTEASRAYYAQVIARLAEQGAQGVIFGCTEIGLLVPEERSVLPVFDTAA
                     IHAEDAVAFMLS"
     gene            complement(17110..18525)
                     /locus_tag="JN001_001978"
                     /pseudo
     CDS             complement(17110..18525)
                     /locus_tag="JN001_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311725.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sugar porter family MFS transporter"
     gene            complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JN001_001979"
     CDS             complement(18840..19601)
                     /gene="kduD"
                     /locus_tag="JN001_001979"
                     /EC_number="1.1.1.127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase
                     KduD"
                     /protein_id="HAY9053221.1"
                     /translation="MILSAFSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGINIVE
                     PTETIEQVTALGRRFLSLTADLRKIDGIPGLLDRAVAEFGHIDILVNNAGLIRREDAL
                     EFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTA
                     SKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRW
                     GLPSDLMGPIVFLASSASDYVNGYTIAVDGGWLAR"
     gene            complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JN001_001980"
     CDS             complement(19631..20467)
                     /gene="kduI"
                     /locus_tag="JN001_001980"
                     /EC_number="5.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-4-deoxy-D-glucuronate isomerase"
                     /protein_id="HAY9053222.1"
                     /translation="MDVRQSIHSAHAKTLDTQGLHNEFLVEKVFVADEYTMVYSHIDR
                     IIVGGIMPITKTVSVGGEVGKQLGVSYFLERRELGVINIGGAGTITVDGQCYEIGHRD
                     ALYVGKGAKEVVFASIDTATPAKFYYNCAPAHTTYPTKKVTPDEVSPVTLGDNLTSNR
                     RTINKYFVPDVLETCQLSMGLTELAPGNLWNTMPCHTHERRMEVYFYFNMDDDACVFH
                     MMGQPQETRHIVMHNEQAVISPSWSIHSGVGTKAYTFIWGMVGENQVFDDMDHVAVKD
                     LR"
     gene            complement(20754..21935)
                     /locus_tag="JN001_001981"
     CDS             complement(20754..21935)
                     /locus_tag="JN001_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708633.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HAY9053223.1"
                     /translation="MKDVVIVGALRTPIGCFRGALAGHSAVELGSLVVKALIERTGVP
                     AYAVDEVILGQVLTAGAGQNPARQSAIKGGLPNSVSAITINDVCGSGLKALHLATQAI
                     QCGEADIVIAGGQENMSRAPHVLTDSRTGAQLGNSQLVDSLVHDGLWDAFNDYHIGVT
                     AENLAREYGISRQLQDAYALSSQQKARAAIDAGRFKDEIVPVMIQSNGQTLVVDTDEQ
                     PCTDASAEGLARLNPSFDSLGSVTAGNASSINDGAAAVMMMSEAKARALNLPVLARIR
                     AFASVGVDPALMGIAPVYATRRCLERVGWQLADVDLIEANEAFAAQALSVGKMLEWDE
                     RRVNVNGGAIALGHPIGASGCRILVSLVHEMVKRNARKGLATLCIGGGQGVALTIERD
                     E"
     gene            22190..>22588
                     /locus_tag="JN001_001982"
     CDS             22190..>22588
                     /locus_tag="JN001_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053224.1"
                     /translation="MSNIWSKEETLWSFALYGTAVGAGTLFLPIQLGSAGAVVLFITA
                     LVAWPLTYWPHKALCQFILSSKTSAGEGITGAVTHYYGKKIGNLITTLYFIAFFVVVL
                     IYAVAITNSLTEQLAKHMVIDLRIRMLVSLG"
BASE COUNT         5794 a         6048 c         5440 g         5306 t
ORIGIN      
        1 atacagtcac cctgtccgac aatttccagc ccttcgccgg tacagatgcc atgacaataa
       61 cccgccctct ggagatgctt cgcgacggta aatacccgca gccagatttc atcttccagc
      121 gccagcttac gggtgctcgt taaactttca cgctgtaacg caggcagaaa gcgtgcagcc
      181 cccagcaaca atacgctact gatcgccata gcaatcaaca cttccagcag agaaaaacct
      241 tgctctttta caggcatcct tctgtttctc cttgctgaca aagccggagt cttccccacg
      301 gcgaaaccac cagccaccac tcgcccgttg agtttttgaa gcgaatatgc ccggcccatg
      361 cggtattgcg caggccaaag aaagcaagcg aaggtgtcag gtcgctcatt tcgacttcgg
      421 gccagcgtgg cacaaagacc aatggtgaac tgccatgaca ggtattggcc ccagcagcgg
      481 aactcacaag gcaccataac gtcccctccc tgataacgct gatactgtgg tcgcggttat
      541 gccagttggc atcttcacgt aaatagagca aatagtcccg cgcctggctg gcggtttgcc
      601 atagccgttg cgactgctgc cagtattgcc agccatagag tccacttgcg cttagcatga
      661 ccaaaatcag catcgcgacc agcgtttcaa tcagcgtata accacgttgt gttttcatgc
      721 cggcagtatg gagcgaggag aaaaaaagac gagggccagt ttctatttct tcggcgcatc
      781 ttccggacta tttacgccgt tgcaggacgt tgcaaaattt cgggaaggtg tctcgaagaa
      841 tttaatggag ggtaaaaaaa accgacgcac actagcgtcg gctctggcag gatgtttcgt
      901 aattagatag ccaccggcgc tttaatgccc ggatgcggag cgtagccttc aatctcaaaa
      961 tcttcgaaac ggtagtcgaa gatggattcg ggtttacgtt tgataatcaa cttcggcagc
     1021 ggacgcggtt cgcggcttaa ttgcagatga gtttgatcca tatgattgct gtacaggtgc
     1081 gtgtcgcccc ccgtccagac aaaatcgccc acttccagat cacactgctg cgccatcata
     1141 tgcaccagta acgcgtagct ggcaatgtta aacggcaggc cgaggaaaac gtcacaggag
     1201 cgctgataaa gctggcaaga gagtttgccg tctgccacat agaactggaa gaacgcatgg
     1261 cacggtgcca gcgccatttt atccagttcg cctacgttcc acgctgaaac aataatgcgg
     1321 cgcgaatccg ggtcgttttt cagctggttc agtaccgtag tgatctggtc aatatgacga
     1381 ccatccggcg ttggccaggc gcgccactgt ttaccataca ctggcccgag gtcgccgttt
     1441 tcatcggccc attcgtccca gatggtgaca ttgttttcgt gtagataagc aatgttagtg
     1501 tcgccctgca gaaaccacag cagttcatgg atgatggaac gcaggtggca acgtttagtt
     1561 gtcaccagcg ggaatccatc ctgcaggtta aaacgcatct gatgaccaaa aatggaaagc
     1621 gttccggttc cggtacggtc gtttttctgt gtgccttcgt cgagcacttt ttgcatcagt
     1681 tctaaatact gtttcatggt tcctcaggaa acgtgttgct gtgggctgcg acgatatgcc
     1741 cagaccatca tgatcacacc cgcgacaatc atcgggatgg aaagaatttg tcccatgctg
     1801 atgtactgca cccaggcacc agtaaactgc gcgtcgggct ggcggaaaaa ctcaacaatg
     1861 atgcgaaacg cgccgtaacc aatcaggaac aaacctgaga cagctcccat tgggcgcggt
     1921 ttacgaatat acaggttgag gataataaac agcactacac cttccagcaa cagctcgtaa
     1981 agctgtgatg ggtggcgcgg cagcacaccg taagtatcga aaatggattg ccactgcggg
     2041 ttggtttgca gcagcaaaat atcttctgta cgggagccag ggaacagcat ggcaaacggg
     2101 aagttcgggt caacgcggcc ccacaattca ccgttaataa agttgcccag acgcccggca
     2161 ccaagaccaa acggaatgag tggtgcgata aaatcagaga cctggaagaa ggaacgttta
     2221 gtacggcggg cgaagataat catcaccacg ataacgccaa tcaggccgcc gtggaaggac
     2281 atgccgccgt cccagacacg gaacagatac agcggatcgg ccataaactg cgggaagttg
     2341 tagaacagaa cataaccaat acgtccaccg aggaagacgc cgaggaagcc cgcatagagt
     2401 aagttttcaa cttcattttt ggtccagcca ctgcccggac gattcgcccg acgtgttgcc
     2461 agccacattg caaaaatgaa acccaccaga tacatcaggc cgtaccagtg aagcgccacg
     2521 ggtcctattg agaaaatgac cggatcaaac tccggaaaat gcagatagct actggtcatc
     2581 tgtcaccaca agttcttgtt atttcgctga aagagaacag cgattgaaat gcgcgccgca
     2641 ggtttcaggc gctccaaagg tgcgaataat agcacaaggg gacctggctg gttgccggat
     2701 accgttaaaa gatatgtata tgatccgcgc tataaccctc cgcgaatcag cccgcccatg
     2761 ccgcgacgct ccataaaggc tgcaacctga tgacgaactt cggtcgccag ttgcgcttcc
     2821 agactacgct gcgcaagatt ttctgcttcg gcaaaatcaa tgcgccgcag caggtatttt
     2881 acccgcgcta cagaacgtcc gttcatagac agatggcgat acccaagccc aatgaggatt
     2941 gccacgcaca tgggatcgcc cgccatttca ccgcacaaac ggagatcgat accatgtatt
     3001 tccgcttccc gggcgatcat tgccagagct cgtaacattg caggatgaag gctgtcataa
     3061 atgttcgcca cccgggtatt gttgcgatca acggccagaa tgtattgagt cagatcgttg
     3121 gtgccaacag agatgaaatc gacccgcttt gccagatgcg gcagcataaa taccattgac
     3181 ggtacttcca gcatgatgcc gatacgtggt ttgggaattt cgtaaccgat catctcctcg
     3241 acttcacgtc cggcacgttc aatcaggcgg cgtgcttcgt caacttcatc gaggctggtg
     3301 accatcggca acagaatatt caggttgccc gtagcggcat tagcacgcag catcgcccgc
     3361 acctggatca agaagatctc cggctgatcg agcgtaatgc gaatcccacg ccaacccagg
     3421 catggattct cttcgctgat cggcatgtaa ggcagctgct tatctgctcc gacatccagc
     3481 gtacgcaagg tgacgggttt atcattgaac atttgcagca tcccctgata ctgcgccacc
     3541 tgttcatctt ccgacgggaa accactttgc agcatgaatg ggatttcagt gcgataaaga
     3601 ccgatgccat caatacggct gcccagtttt tcttcatgtt ccgggcttaa accagcattg
     3661 agcatgactt ttatacgctc accgcttttt aactgcgcgg gtaaattgac gtcatcttcc
     3721 gccagacggc taagctcaat ctcttcacta attagccgct gatattcttg cagcagtatc
     3781 ggctccggat cgaccagcaa ttcaccgcga tagccatcaa cgatcagcgt cctacgatgc
     3841 agcaccgaag gctgaatatc cgcgcccatc acggtaggga gccccagcgc acgtaccatg
     3901 atcgcagcat gggagttggc tgcgccatct cgcacgacaa caccgactaa gcgatcctgg
     3961 ggcagctcag caagagttgt cgctgacagt tcatctgcca ccagaatgaa acgttccggc
     4021 caggcgttcg gcccttgatt agcgtcatca agatgaaaca gcaatcgctg acccagcgca
     4081 cgtaaatcgc cagcccgctc tttgagatag ttatcgctta gcgcggcaaa ctgttcggca
     4141 aatttttcaa tgaccgtttt taccgcccac tctgccaccg agcctttatc aacctcggca
     4201 aacaattcgc gacgcagccg ggtgtccgaa agcaggtgcg agtaaagatc gaaaatagcc
     4261 gccgtttctt tttgtgctcc ggcggcaaag cgtttgctgt agcggcgaaa ctcgtttgcc
     4321 gcttcttcca gcgccccggt caatcgttcg cgttccagag ccggatccag cgttgatgcc
     4381 tgatacacct gttccattaa aggtaacgtg gcatcctgcc agccttcggc aatcgccaca
     4441 ccaggtgctg ccggtaatgc gcggattcgc gtctggcgat attgcccaaa caaggcagtc
     4501 aactgcgact gagaaagaat agctgccatc tgggtggcaa gcgtcaccag gaaggattct
     4561 tcactttcgt catactggcg caactctcgt tgctgtacca ccagtacacc aagcaactgg
     4621 cgacgttgaa taattggtac gcctaaaaac gcgcggaaac gttcttcttt tacggagggg
     4681 atgtatttga agctggggtg cttttgcgca tctgcaaggt ttatcggttc cgccagcctg
     4741 ccaaccaggc cgacgatccc ttcatcaaac gcgagcgtta cagtgcgacc gcgtggtttt
     4801 ttcagccccc gggtcgccat caggtagtaa caacgtcgat catgatcggc caggtagacc
     4861 gaacagacct cggtatccat cgcaagacag atgtcggtaa ccagaatatt taacgcctca
     4921 ttcaggcgtg gtgcgctggc taccttttcg actatttcgc gcaggcgagt gagcataatt
     4981 ggcgtgactt aacctctttt acgtcgataa gcagatgtgt tttgtggttt tggcgtattt
     5041 tcctgcagtg acatcaccac actcgcgaac tctttcatta ccctacggta gacatcacgt
     5101 ttaaatgaca ccacctgtct gaccggatac cagtaactta cccatcgcca gccgtcaaac
     5161 tctggtgtac tgctggtttg catattgatt tctgcatcgc cgctcaccag ctgcaagaga
     5221 aaccattttt gtttttggcc gatacaaacc ggcttcgtgt cccaacgcac caaacgtttc
     5281 ggtaatttgt agcgcaacca gttacgcgtt gaagcaagga ttcgaacgtc tttgcggctt
     5341 aatcctactt cttcaaacaa ttcacggtac atcgcctgct ctgcggattc tccggggttg
     5401 attccgcctt gcggaaattg ccaggagtgc tgaccaaatc gccgggccca cattacctgc
     5461 ccctggcgat tacaaatcac gatacctacg tttgggcggt agccatcgtc atcaatcacc
     5521 ggactacctc aaaataaagc tttatatacg aatgattgtt tcatactcca ggaagacggt
     5581 aaaccactct ctgcagggca ttacacacta ataacaattg aataactcac agttatgtgc
     5641 agagttataa acagaggaag gggtggatag ccgtttttat tcaccttttc tgtggataga
     5701 gttgtgaaga actacggaat tactacggga aaacccggag cattctgaat aagcccgata
     5761 taggcatttt aaaatattca ttataagtca atgcattaca tgtaatttga gtaatgaaaa
     5821 agagtaattc gtgacccagg tcacacctct catttacggg ttggcgaaag atcaaccaat
     5881 gccgtattta tccacagaat gtgccactaa gttaagcact gaaccactaa aaactggagt
     5941 ttcgtcgcac gtcaaggctg taaatggaaa cagtagtgga ggtttttcac agttatccca
     6001 gctttctgtg gataacatgg tgtaagatcc tgtttatttt cagtgaccag atttggaaaa
     6061 cctattgcag tgctgcgcaa ctcgattatc ggcagcctaa aaagcaatat aaatcagaga
     6121 attgaacaac acatgtggaa aaagttacac tgcgaatatt cggtacataa ttgctgtttg
     6181 ttttttaacc aaggtatcat gacatgtccc aacctcgccc actgctctct cctcccgaaa
     6241 ctgaagaaca gttgttagcg caagcacagc aactttctgg ttatacattg ggagaactgg
     6301 cggcacttgc cgggctggtt acgccagaga atttaaaacg cgataagggc tggattggcg
     6361 tgttactgga gatctggcta ggtgccagcg cagggagtaa acctgagcaa gattttgctg
     6421 ctctgggcgt ggaacttaaa actatccctg tggatagtct tggtcgtccg ctggaaacaa
     6481 cattcgtttg tgttgccccg ttaacgggta atagcggggt gacctgggaa accagccacg
     6541 tgcgccacaa gctcaaacgc gtactgtgga taccggttga aggcgagcgc agcatcccgc
     6601 tggcgcagcg tcgcgtagga tccccgttgc tgtggacccc gaatgaagag gaagaccgac
     6661 agctacgcga agactgggaa gaattaatgg atatgattgt tctcggtcag gttgagcgga
     6721 tcaccgctcg tcacggggaa tatttacaga taagaccgaa agcagcgaat gcgaaagcgc
     6781 ttaccgaagc cattggtgcc cggggcgaac ggattctgac gctgccacgc ggcttttatt
     6841 tgaagaagaa tttcaccagt gcactactgg cccgtcattt tctgatccag tagccatcgc
     6901 tttgacctgc cgctttccgg gcatataatt accgcttcat ttttttggca gggcttttta
     6961 gatgttattt gcatggataa ccgatcctaa cgcctggctt gcgctcggta cgctgacgct
     7021 gctggagatc gttcttggga tcgacaatat tattttcctt tctctggtgg tggcaaagct
     7081 tcccacagca caacgtgctc atgcgcgccg tctggggttg gcgggagcca tggttatgcg
     7141 tctggcgctg ctggcatcaa tcgcctgggt tacgcgcctg acaaatccgc tttttacaat
     7201 attcagtcag gaaatttctg cccgtgattt gattctgctt ctgggtggct tgttccttat
     7261 ctggaaagcc agcaaggaaa tccacgaatc cattgaaggt gaagaagaag ggctgaaaac
     7321 acgcgtttca tcattcctcg gcgctatcgt gcagattatg ctgctggata ttatctttag
     7381 cctcgactcg gtgattacgg ctgtgggtct gtcagatcac ctgtttatta tgatggcagc
     7441 cgtggtgatt gccgtaggcg tgatgatgtt cgccgcgcgc tcgattggtg attttgtcga
     7501 acgccatcct tcggtaaaaa tgctggcgct ctctttcctg attctggtgg gctttaccct
     7561 gattctggaa agtttcgaca tccacgtacc gaaaggttac atctacttcg cgatgttctt
     7621 ctctattgcg gttgaaagcc tcaacttgat tcgcaacaaa aagaatccgc tctgatactc
     7681 cgtacgctct cctgcgggag ggcgtactca ctccttttac cctcacagtt taagattttc
     7741 ctgctttcaa gatatataac gtcgttttat aaacagacta ttatcatagg taggccaaat
     7801 gaggataacc ggatgaaaaa atgggcagta ataatttctg cagtcggact ggcgtttgct
     7861 gtttccgggt gttccagtga ttacgtcatg gcgaccaaag atggccgtat gattttgacc
     7921 gatggaaaac ctgaaattga tgatgatacc gggctggtga gttatcacga tcagcaaggt
     7981 aacgcgatgc aaattaaccg tgatgatgtt tcgcaaatta ttgaacgtta acaaataagg
     8041 tcagcatccg gctggcctta agatttttct ctttcccttt tcccttccct ctgccatttt
     8101 tatattcctt atgtcgtgat tataaaaagg aaacggctat gcaatatcac cgtatacccc
     8161 acagttcgct ggaagtcagc acgctggggc ttggcacgat gacgtttggt gaacagaaca
     8221 gcgaagccga cgcccacgca caactcgact atgccgtcgc tcagggcatt aaccttatcg
     8281 acgttgccga aatgtaccca gtacctccgc gccccgaaac gcaagggtta accgaaacct
     8341 acgtcggcaa ctggctggcg aaacatggca gccgcgaaaa gttaattatc gcctccaaag
     8401 tgagcggacc gtcgcgcaat aatgacaagg gcatccgccc ggatcaggcg ctggatcgga
     8461 agaatatccg cgaagcgctg catgacagcc tcaagcgcct acagactgat tacctcgatc
     8521 tttatcaggt gcactggccg cagcgcccga ccaactgctt cggcaaactc ggttatagct
     8581 ggacggattc tgcgcctgcg gtttcgctgc tggatacgct ggacgcactg gcagagtacc
     8641 aacgcgcggg aaaaattcgt tatatcggcg tgtcgaacga aactgcattt ggcgtaatgc
     8701 gctacctgca tctggcggac aaacacgatc tgccgagtat tgtcaccatt cagaaccctt
     8761 acagtctgtt aaaccgcagt tttgaagtag gtctggcaga agtcagccag tatgaagggg
     8821 tcgaactgct ggcctattca tgcctgggtt tcggcacgct gaccgggaaa tatctcaatg
     8881 gtgcaaaaac cgctggcgca cgtaatacgc tctttagtcg gttcacccgc tatagcggtg
     8941 agcaaacgca aaaagccgtc gcggcgtatg ttgatatcgc cagacgtcat ggcctggacc
     9001 ctgctcagat ggcgctcgcg tttgtacgcc gtcaaccgtt tgttgccagc actctgctgg
     9061 gcgcaaccac gatggatcag ctgaaaacta acatcgaaag tttgcatctg gagttaagcg
     9121 aagacgtatt agctgaaatt gaagcggtgc atcaggttta tacttatccg gcaccataag
     9181 attaacgccg gttaaaaccg gcgttaaata ttaatgacgg cgctgccaga tccacagcgc
     9241 cgttattgcc agcgcaaaca gcgcaccgaa gccaatgcca atgggcacga ccgggatgcc
     9301 taccattacc gccagcgagt aaatgcccag catcaacaac atggcgctgt tttcgccaag
     9361 gttttgtact gcaatcgcat tccccgcccc gacgcttttt ttaccccgct cctgtagcaa
     9421 cgcattgagc ggaacgacaa aaaagccccc catcacgcca atcagcatca acaaggcata
     9481 ggctggcagc agctcgtgtt gcagggaaaa aatcagtacc accacgccaa tcaaaatccc
     9541 ggctggcata cagcgtgaca cggtttccag cgtaactaac ttcgctgccg cacctgcgcc
     9601 aaccacgata ccaatcgcta ccatcgcgtt gagataggtg ggcgtagagt tatcggtaat
     9661 gcccagcgcc accggtaccc acagcaccaa caggaaacgc agcgtgacac ccgctcccca
     9721 gaataaactg gtgcccacca gcgaaaaacg cgtttcacca ttgcgccata gcgaggtgca
     9781 ggcattcagg aaactgcggg tcatgttgat gagattccaa gactgccccg gacgcgccgc
     9841 cgccagtttg ggaatgtaga tattggcaac gaccgcacca ccgtaggcca gtgcgcatgc
     9901 ggccagggcg acgaggacat gccagtcagc cagcacacca ccggctacgg aaccgagcaa
     9961 aatcgccgct atggtagaag cttccattaa accgttagct ttcactaact tactacccgt
    10021 ggttaattcg ccgagaatac cgtatttcgc cggtgaatag gctgcagcac caacccccac
    10081 cagcgtatag ccgagaaacg gattgatacc aaagcagata ctggctgcgc ccagcagctt
    10141 caggccgttg gcaaacatca tcacccggcc tttggcgaag ctatccgcca cctgcccgac
    10201 aaacggcgca aaaagaatgt aagcacctac aaacaccatt tgcaggatgg gctggctcca
    10261 ctccggatag aactgcgctt tcagtaacgc cagagtggca aacagtaggg cattatcgcc
    10321 aaacgcagag agaaactgcg ccacgataac cgctttcatc cccttcgacc acaacgaagt
    10381 gttagtgtgc actgactcac tcatcgtgtt gttccgcttc gtctacccag cttttcaacg
    10441 tgacaaagtc aggtttgccg ctgccaagta atggcatctg tttcagatag cgaatatcgc
    10501 gcggtacagc aagctccggc acgccgtgct cgcgggcata ctgttgcaac ttatcgagcg
    10561 tcagttcgtt atctgtggtg aaaagcacca gtgcctcgcc tttgctggca tcgctcttaa
    10621 tcgcagtggc atggacttta tctggcgaaa caccaagtgc cagttgttcc accatttcca
    10681 gcgacaccat ttcgcctgca attttggcaa agcgttttgc gcggccctga atctgcacaa
    10741 agccctgctc gtcaaaacgc acaatatcgc cagtgtcata ccagccgcgc tccatttcgc
    10801 cgcgaacatt ctcggcggtg ggcacttcca gtacacctgg cttctccacc cgcagatagc
    10861 cgttcattat gttcggccct ttcagttgca ggcgtccgcc ctcttcgata ccaggaaccg
    10921 acaacagacg cgcatccatt cctggtagaa tacgccctac cgtaccgggt ttcgccgcca
    10981 tcggtacgtt gatagaaacg acaggcgcgc actcggttac accatagcct tcaaggatgc
    11041 gcaggccaaa tttatcctgc caaagctgtt tggtactttc ttgtagtttt tctgcgcctg
    11101 ccaccacata gcgtagacga tagaagtcat acgggttggc gaaacgcgcg tagtgaccga
    11161 ggaaagtcga ggtaccgaac aacacggtgc aactgcggtc atacaccaac tccggcacaa
    11221 tgcggtaatg cagcgggctt ggataaagga acacttctgc acctgtaagc agtggcgtaa
    11281 acaggcctac cgtcagccca aaggagtgaa acagcggtaa tgccgacata aagcgatcgt
    11341 tggtggtgaa gtcggcaatc gttttaatct gctcgacgtt cgccagaatg cttttatggc
    11401 tatggacgac gccttttgga tggccttcag aaccggaggt aaagaggatc agcgcctctt
    11461 cttccggctg ctgttttacc tgcgccaggc gcggcatcag caaatgagcg aagatccata
    11521 ctttgtcggc agtggtgaca tctgctttta aatcttccag atagacccag cgcacctgag
    11581 taagttgctc cggcagatgc cagagtttgc ctttatcgag aaactggcgg gaagtgaaga
    11641 tggttttgat ttcagccgcc gtaatagcac tggtcagccc ttttacccca gcagtgtagt
    11701 tcatcattgc gggaatgcgg cgacgcgcga tggccccaaa aatcactgcc gcactgatgc
    11761 ctgcattggg cagcattaag ccgatgcgtt cgccttcaac actgtatttt tcaaggatgc
    11821 gtccaacaaa cagcgttttc gtaagcaatt tgcgatagga gtctggggta aagttgacgt
    11881 cttcgacaca tttcttcccg gctccgaagc ggtacattgc actcagtaaa gattcgtaca
    11941 gagtttcacg cgggcgcacc gccatacgcg cttccatcat tatttgatgc agcatttcgc
    12001 cagcgatttt gcgacggtca cgggcacgcg acgcatccgg catcgccacc tgcgttggag
    12061 gcaaaatatg cagagtaatt tgcgggaaca agcgacgttt aaccagacct ttcaggcggc
    12121 tgaagtgcgt aagttccgcc ccttcaatac gcacaggaat aaccgttgca ccagacttcg
    12181 ccgcgacaaa acccgcgcca tcgtagattt tcatcagcga gcctgtagtg gtgatgcgtc
    12241 cttcagggaa aatcaccact ggtcggccct gttccaccag acgtaccaga tgtttaatag
    12301 ccataggttg cgtcgggtcg agaggaacaa agtcgataaa tgatttcagc caacgcatat
    12361 accactgttg gcttattgag gtgtaaacgg caaacactgg acgcacaggt aaaaacagtc
    12421 caagcaaaat gccatcaata aaagagacgt gattaggcgt aattagaacg cgctcgccct
    12481 tcagtgcctg ggtgtcaccc gtaacgcgaa cgcgatacaa aacacggcac aaatttcgaa
    12541 aaaagctaaa aagcattcca actccctttg ctctgattca gtaaaagcga atggagggag
    12601 attacacgag ataaagaacg cgagcgacag taaattaggt gcgaaaaaaa acctgcgcat
    12661 ccgcgcaggt tggtgcaaga gacagggtac gaagagcgta ccgaataatc tcaccaatca
    12721 atacctctgg gatcaccact ttagcaacct gaagccaaac gccaccagcg gtcaatcgca
    12781 acagcgtttc gcaaagtgta accaaaggtt tgcaatctct ttttttgtct tacttatttg
    12841 cgtttggctc acattcccac gatgaaaaca cgccactcct tgaaccaacg ggcgttttcc
    12901 gtaacactga aagaatgtaa gcgtttaccc actaaggtat tttcatggcg accataaagg
    12961 atgtagcccg actggcaggc gtttcagtcg ccaccgtttc ccgcgtcatt aataattcac
    13021 ccaaagccag cgaagcttcc cggctggctg tgcatagtgc aatggagtct cttagctatc
    13081 acccgaacgc caacgcccgt gcgctggcgc agcagaccac tgaaacggtc ggtctgatcg
    13141 ttggtgatgt ttccgatccg tttttcggtg caatggtgaa agcggtcgaa caggtggctt
    13201 atcacaccgg taatttctta ttgattggca acggttacca caacgaacaa aaagagcgtc
    13261 aggctattga gcaactgatc cgccatcgct gtgctgcgtt ggtcgtccat gccaaaatga
    13321 tcccggatgc cgatttagcc tcattaatga aacaaatgcc cggtatggtg ctgatcaacc
    13381 gtatcctgcc tggctttgaa aaccgttgta ttgctcttga cgatcgttac ggtgcctggc
    13441 tggcaacgcg tcatttaatt cagcaaggtc atacccgcat tggttatctg tgctctaacc
    13501 actctatttc tgacgccgaa gatcgtctgc aagggtatta cgatgccctt gctgaaagtg
    13561 gtattgcggc caatgaccgg ctggtgacat ttggcgaacc agacgaaagc ggcggcgaac
    13621 aggcaatgac cgagcttttg ggacgaggaa gaaatttcac tgcggtagcc tgttataacg
    13681 attcaatggc ggcgggtgcg atgggcgttc tcaatgataa tggtattgat gtaccgggtg
    13741 agatttcgtt aattggcttt gatgatgtgc tggtgtcacg ctatgtgcgt ccgcgcctga
    13801 ccaccgtgcg ttacccaatc gtgacgatgg cgacccaggc tgccgaactg gctttggcgc
    13861 tggcggataa tcgccctctc ccggaaatca ctaatgtctt tagtccgacg ctggtacgtc
    13921 gtcattcagt gtcaactccg tcgctggagg caagtcatca tgcaaccagc gactaaccgc
    13981 agttaaagca attccagcgc cagtaattct tcgatggtct ggcgacggcg aatcaaccgc
    14041 gcctgaccat tatcaaacag aacttctggt aacagcgaac ggctattgta gttggatgac
    14101 attgatgcgc catatgcccc tgtatcatgc agtaccagat aatcacctgc cttcacttcc
    14161 ggcaaggcgc gggtttcaac atttccccct tcctgctggg taaagacatc gcccgattca
    14221 cataacggtc cggcgacgac ggtttccacc gttggcgcgt gttccagaga acgaccatca
    14281 gctgccaggg cactgatatg gtggtaacta ccgtacattg ccgggcgcat cagatcgttg
    14341 aacccggcat caaccagcac aaagtggcgg ctccccattt gtttgacgct ccgcacctga
    14401 gtaattaata cgccagactg cgctaccagg aagcgacccg gttcaatttc cagtttcaca
    14461 gggtggccca aatggcgggc gatttgctca cgcgcggcat tccacagacc ataataatgt
    14521 tcggtatcaa ccgcctcttc accctgttga taaggaacag aaagcccacc gcccgcagaa
    14581 atagcctgta aatcctgacc gaattcgatg acctgacgca ccatagcacc acacacctgt
    14641 tccagatggg cataatcaac gccagaacca atgtgcatgt gaatgccgac cagctgcaga
    14701 tgatgacgtt gtatcacgtc cagtgcggcg ggcagatcgg tgtaccagat accgtgcttg
    14761 ctgttttcgc caccggtatt ggttttttgg ctatgtccgt gaccaaaccc cggattaacg
    14821 cgcagccata cccgatgccc tggcgaaacc tggcccagtt ggtcgagcat atcaacagaa
    14881 cccgcattca ccggaatttg caattcactg acgcgttcaa gcgtcgcctg atcgataaca
    14941 tctgccgtaa aaacaatatc atcggggtgc gtttgcggat tgtaacccgc cgccaacgca
    15001 cgctctattt cgcctaacga gacggaatcc actttcacgc cctgctcacg cattaagcgc
    15061 aaaatatgaa tattggaaca ggctttctgt gcaaagcgca ccacatcaaa ctgtttcagc
    15121 gctgcaatct gccgacgaat aatttgcgca tcgtagaccc acaccgggca gccaaattca
    15181 gcgggcaaac gcagcagatt ttcggcggtg agatcggtat cggtgctgaa cagtgaatgt
    15241 ggcataacaa actccagata agtgcttttt tatgattacg ccacatcata aaaagaataa
    15301 aaaatatcga tttatgtcga gtctatgcaa aaatgatatg gattaccgga ttgcgagaga
    15361 gcgctaatgg ccgccgttaa cttacgtcat attgaaattt ttcatgcggt aatgaccgcc
    15421 ggaagcctga ctgaggcggc acacctgcta cacacctcac agccaaccgt cagccgcgaa
    15481 cttgcgcgct ttgagaagat gatcgggctg aaattgtttg agcgcgtacg tgggcgatta
    15541 catcctaccg tgcaaggact gcgtctgttt gaagaagtgc aacgatcctg gtacggactg
    15601 gatcgaattg tcagcgctgc agaaagtctg cgcgagtttc gccagggaga actgtctatt
    15661 gcctgcctgc cggtcttttc gcaatctttt ttaccgcagc tcctgcaacc ctttctggca
    15721 cgttatcccg atgtcagctt aaatatcgtg ccccaggaat caccgctact tgaagagtgg
    15781 ctctcggccc agcgtcatga tttaggactc actgagacac tccatacgcc tgcgggaaca
    15841 gaacgtaccg aattactctc tttagatgaa gtgtgtgtgt tacctccggg tcatccgctg
    15901 gcggtaaaaa aggtattaac gccggatgat tttcagggtg agaactacat cagcctttcc
    15961 cgtactgaca gctatcgcca gttgctggat cagctattta ctgaacatca ggttaaacga
    16021 cgcatgatcg tagaaaccca cagcgccgcg tcaatctgcg caatggtacg ggcgggggta
    16081 ggtgtttcgg tggttaaccc gctcaccgca ctggattatg cggcaagcgg tttagtggtg
    16141 cggcggttca gtattgcggt tccgttcaca gtcagcctga tccgccccct gcaccgcccg
    16201 tcatcagcgc tggtgcaggc gtttagtgag catttacaag cggggttacc gaaactggtc
    16261 acttctcttg acgctatttt gtcgtcagct acgacagcat aaaagcgaca gcatcctcgg
    16321 catggatcgc cgcagtatca aacacaggca aaacactgcg ctcttctggc accagtaaac
    16381 caatttctgt gcagccaaaa atgacgccct gtgcgccctg ttctgcaagg cgagcaatca
    16441 cttgcgcata ataagcgcgt gacgcttcgg taaattgccc cagacacagt tcttcaaaaa
    16501 taatctgatt aattttcgcc cgttcatccg cttcaggaat aagacaattg atggaaaatt
    16561 gttccgtcag ccgcccgcga taaaaatcct gttccatggt gtaacgcgta cccagcagcg
    16621 ccacacgagt cattccggcc ccggtaattg cacgtccggt ggcatccgca atgtgtaaga
    16681 aaggcagagt gcaacgtgac tcaatggcat ccgccacttt atgcatcgta ttggtacata
    16741 acacaatacc ttctgcgccc gcccgctgta agccaagcgc cgcctcagcc agaatgtccc
    16801 cggttttatc ccattccccg cgacgctggc actcttctat ttcatgaaaa tcgacgctat
    16861 gtagcagcac ttgcgcagag tgaagcccac caagccgctg tttaatgcct tcatttatca
    16921 aacgatagta aggaatggtg gattcccagc tcattcctcc cagcaaacca attgttttca
    16981 ttcctctctc ctgatgtgtg ttaccgcaac aaggctgaat aaggaacgag acaaacgcct
    17041 caacggccaa gtgcccaatc tctattaacg aaaaaagggc cggatgtaca gcacatccgg
    17101 cccgtgaaat cagatgccga tatttctcaa cttctcgcct gccatcagtt tgcgttcgat
    17161 atgttccagc gtgacatttt tggtttccgg aatgagccag aaagtgatgc ccacaaacgc
    17221 aatgttcagc gcagtgtaga gccagaacgt accggcagcg ccaatgctgt cgagcagcgt
    17281 caggaaggtc gccgataatc atattcgaca cccagttcgt ggtggtcgaa caggtaatac
    17341 cgaaatcgcg gcatttcagc ggctgaattt cagagcacag gatccacacc actggcgcgg
    17401 cgctcatcgc ataaccggca atacacatca tcgtcatgcc aacagagagc caggacaatc
    17461 cactggaagc cgtaccgtta tcaaactgca tcaggcaata gcccagcacc agagtgccta
    17521 acgccatcac gctgaaacca attttcagag ccggtttacc cctgctttat ctaccgtaaa
    17581 caccgcaata aaggtggcga acataaaggt cagccctacg accagagtcg caatcatctg
    17641 ttgttctgtg gtcgtaaagc ccgccatttt gaagatacgc ggcgcgtagt acatgatgat
    17701 gttcataccg gtaaactgct gcatcgcctg caacaacata ccgagaaaca cagcacgacg
    17761 gacgttacgg ttgatcttaa acagtgccca accgccctgt tttaacttca ggctttcacg
    17821 aatttcgttg agttcttctc gcgctttttc cgacgtatcg cgcagcatac gcaatacttc
    17881 ttccgcctca atatgacgcc ccttttccgc caaccagcgc gggctatttg gcaggaagac
    17941 caccagaata atcagcagaa ctgctggtaa agcaagaacc cccaacattg cgcgccagtt
    18001 accgctataa ctgaacgctg tatcggataa aaacgccagc acgatgccga gtgtgaccat
    18061 caactggtac atactgatca tcttaccgcg aacgttttca cttgccattt cagaaagata
    18121 cagaggagcg gtgtaagacg cgatcccgac agcaatgccc agccccacac gagcggcgat
    18181 taacatctct acgctggtcg caaaagcgga ccctatagaa ccgagtacaa acaggatggc
    18241 ccccgccatc aggctgtatt tacgccccag gcggaacgac agccaaccat taaacagcgc
    18301 accaattgct gcgccgagca tcatgctact aaccacccat tcctgcaaat gactggtcag
    18361 cacaaagtga tcggtaatga acggcaacgc tccggcgatt acgccgatat caagaccaaa
    18421 taacaatcct gcgaccgcag cagctaccga aacaaacata ttcatacgcc gcgtatcccg
    18481 caaagaacgt ggcgttaaag cagattccgt attgatagta accatttttt cctgccagca
    18541 gagagtaaga catagtgaaa aaatacgtga acaactcacg caggtgtcag gtcggaaaca
    18601 gcataaatat ggattaaatt gctgcgacat gtcgttatgt gatggatatt ccaattttca
    18661 aattaagttg aattattgag attattatta accacctaat tttacagcag ataaaattca
    18721 taaagttcat taattgataa ttaatatgga ttatttcata accatgatat ggattatgat
    18781 gatctacagg tataaaaaac cctgccatgc ggcagggtca taaaagtaag aagaatgaat
    18841 taacgcgcca gccaaccgcc atccacggca atggtataac cattcacata atctgaagcg
    18901 ctggaggcaa ggaacactat cggccccatc aggtcactcg gcagtcccca acgaccagct
    18961 ggaatgcggt cgagaatttc cgcgctacgt tgttcatctg cccgtagttg ttgagtattg
    19021 ttggtcgcca tgtaacccgg agctatcgca ttaacattaa tgttgtgttt agcccattcg
    19081 ttcgccatca atcgcgtcac acccatcacg ccgctttttg atgcggtata agaaggcaca
    19141 cggatcccgc cctggaagga gagcattgac gcgatattga taatcttgcc gccattgcct
    19201 tgcgcgataa agtgtttcgc cgctgcctga gacatgaaga atacgctctt gatattcagg
    19261 ttcatgacat cgtcccagtc tttttcgctg aactcgagag cgtcttcgcg gcgaatcaat
    19321 ccggcgttat tcaccaggat atcaatatga ccaaattcag ctaccgcgcg atccagcagt
    19381 ccaggaatgc catcaatctt tcgcagatcg gcggtcaggc ttaaaaaacg acgccccagc
    19441 gccgtgacct gctcgatggt ttcagtcggt tcaacgatgt taatgccaac aatgtcacag
    19501 cccgcttgcg ccagccccaa cgccatcccc tggcccagcc cagtatcaca accagtgact
    19561 accgcaactt taccttcgag agaaaatgca cttaaaatca taacaatacc ttattcgttt
    19621 atgcccacaa ctagcgcaaa tctttaacgg ccacatggtc catatcatca aagacctggt
    19681 tttcaccaac catgccccag ataaaggtat aagctttggt tccgacgccg gaatggatcg
    19741 accagctcgg ggagatcacc gcctgctcgt tatgcatcac aatgtgacgc gtttcttgcg
    19801 gttgccccat catgtggaaa acgcaggcgt catcatccat attgaaatag aaataaactt
    19861 ccatccggcg ctcgtgggtg tgacacggca tggtgttcca caagttacct ggagccagct
    19921 ccgtcagccc catactcaat tggcaggttt ccagcacatc cgggacaaaa tatttgttaa
    19981 tagtgcgacg gttactggtg aggttatcgc ctaacgtgac tggagatact tcgtccgggg
    20041 tgactttttt ggtgggatac gtcgtatgcg cgggtgcgca attgtaataa aactttgccg
    20101 gagtggcggt atcaatactg gcaaagacaa cttcttttgc acctttacca acatacaggg
    20161 cgtcgcggtg accgatttca tagcattggc catcgacagt aatcgtaccg gcaccgccaa
    20221 tattgataac acctaactcg cgacgttcaa ggaaatagct tacgccgagt tgtttaccaa
    20281 cttccccgcc aacggaaacc gttttagtta tcggcataat gccgccaaca ataattcggt
    20341 caatgtggct gtaaaccatg gtgtactcat cggcgacaaa taccttttca accaaaaatt
    20401 cattgtgcag cccttgggta tccagcgttt ttgcgtgcgc actgtggatg ctctgtctta
    20461 cgtccacatc aacctccgat aatcagtgaa gcgtgaaaat agaaaacgat agtgaaacac
    20521 tgtttcgttt tctctataaa gggatgatat gcccatgggc tagggttttc aattaaaaat
    20581 aaaacaatgt tttattttta agttaaggat taaaaaaagt gcagtgtcga tcacgaatat
    20641 gtcatgagaa tggaaaaatg agggagccca gaaaatgtat gtcgacttgc cagccatcat
    20701 tattcaacag attaatgacg gcagatattt atcggtaagg aggaaatgca gagctactcg
    20761 tcacgttcaa tggtcaatgc cacgccctgg cccccgccga tacaaagcgt tgccagccct
    20821 ttgcgggcat tacgtttcac catttcatga accagagaaa ccaggattcg gcaaccggaa
    20881 gcgcctatcg ggtgaccgag tgcgatcgcg ccaccattga cattgacccg acgctcatcc
    20941 cactcaagca tcttgccaac cgaaagcgcc tgtgcagcaa acgcttcatt agcctcgata
    21001 agatcgacat cagccaactg ccagcctaca cgctccaggc aacggcgggt cgcatacacc
    21061 ggcgcaattc ccatcaatgc cggatctaca ccaacgctgg caaatgcgcg gatgcgggcc
    21121 agcacgggta aattcaacgc tcgtgctttg gcttcgctca tcatcattac cgcagctgcg
    21181 ccatcgttta tggatgatgc attccccgcg gtcacagaac cgagactatc aaatgaagga
    21241 tttaaacggg ctaaaccttc tgcactggcg tcagtgcatg gctgttcatc ggtatcaaca
    21301 accaacgtct gaccgttact ttggatcatt accgggacga tctcatcttt aaatcgtccg
    21361 gcgtcaatcg ccgctcgcgc tttttgttgc gagctaagtg cgtaagcatc ctgcaactga
    21421 cggctgatgc catattcgcg agccagattt tcggcggtga caccaatatg ataatcattg
    21481 aaggcatccc acaacccatc atgcaccaga ctgtcaacca actggctatt gccaagctgt
    21541 gcaccggtgc ggctatcagt cagaacatgt ggtgcgcggc tcatgttttc ctggccaccg
    21601 gcgatgacaa tatcagcctc gccacactgt atcgcctgag tagccagatg cagtgcttta
    21661 agcccagaac cgcaaacgtc attaatagtg attgcagaaa cgctattagg aagaccacct
    21721 ttaatagccg attgccttgc cggattctgc cctgcccctg cagtcaacac ctgaccaaga
    21781 attacttcat ccaccgcata tgcaggaacg ccggtacgtt ctattaacgc tttcacgacc
    21841 aaactaccaa gttccacggc ggaatgaccc gctaacgcac cacgaaagca gccgataggt
    21901 gtccgtaacg ccccgacaat cacaacgtct ttcatcacaa cctcgcacca attaacagtg
    21961 caatagtaaa tgattgttaa ttacagttat cttaattgtt taaaaaaagt gatttttatc
    22021 acaaaagaaa tatgcctgag cagcagtcag agacataact ggcacgtaag gtttgcaacc
    22081 actaacccac caatagaggg gtagataggg cgttaatctc ccatacttaa cctggtttat
    22141 ggtaaattgc cctccatttt gtttaatttg tagatgatac gttcagataa tgtctaatat
    22201 ttggtctaaa gaagaaactc tgtggagttt cgcgctctac ggcacagccg ttggtgcagg
    22261 cacgctcttc cttcctattc agttaggttc ggcaggggct gtggtcctgt ttattactgc
    22321 tctggtcgcc tggcctttaa catattggcc acataaagct ttatgccagt tcatcctctc
    22381 atcgaaaaca tcagcaggtg aagggataac gggcgcggta acacactact atggcaagaa
    22441 gattggtaat ctgattacca cgctgtactt catcgccttt tttgtcgtcg tgttgatata
    22501 tgcagtggca attaccaact cacttacaga acagctggca aagcatatgg ttattgatct
    22561 tcgcatccgt atgttggtga gtctgggt
//
LOCUS       DADMJE010000058        22467 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.059, whole genome shotgun sequence.
ACCESSION   DADMJE010000058 DADMJE010000000
VERSION     DADMJE010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 22467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22467
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.059"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            53..244
                     /locus_tag="JN001_001983"
     CDS             53..244
                     /locus_tag="JN001_001983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY9053225.1"
                     /translation="MKYGKLGYIVPRPQKIRGRWLIDRRAVFVGPGETGIAPEIHTGD
                     DDALKEILTHVTEATKKQH"
     gene            213..1319
                     /locus_tag="JN001_001984"
     CDS             213..1319
                     /locus_tag="JN001_001984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9053226.1"
                     /translation="MSPRPRKNSTDVAGLYEKFDRRTGRVYYQYKNPVTGKFHGLGTD
                     KGKAEKIASTANQRIAAAEAEYFMRKIDESPSATKRRGIRLKAWVDRYLKIQDTRLKN
                     GDIAATTHKEKTRMAAYLVSRLGNHPLKELEVRDFALILDEWLDKDMVSTARVNRGLW
                     VDIYKEAQHAGEVPPGWNPPEATRKPIPKVTRARLTMEDWQKIYNATPEKHFIRNAML
                     LAIVTGQRRDDICHMRFSDVWNEHLHITQGKTGMRLALPLTLRCDAIGITLKEVIDGC
                     RDRILSPYLIHSRHQKQPKPMSKDNLSDYFAKARDLAGIIPPAGKTPPTFHEQRSLSE
                     RLYRAQGIDTKTLLGHKVQATTDRYNDTRGQEWV"
     gene            1499..2293
                     /gene="potC"
                     /locus_tag="JN001_001985"
     CDS             1499..2293
                     /gene="potC"
                     /locus_tag="JN001_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotC"
                     /protein_id="HAY9053227.1"
                     /translation="MIGRLLRGGFMTAIYAYLYIPIIILIVNSFNSSRFGINWQGFTT
                     KWYSLLMNNDSLLQAAQHSLTMAVFSATFATLIGSLTAVALYRYRFRGKPFVSGMLFV
                     VMISPDIVMAISLLVLFMLLGIQLGFWSLLFSHITFCLPFVVVTVYSRLKGFDVRMLE
                     AAKDLGASEFTILRKIILPLAMPAVAAGWVLSFTLSMDDVVVSSFVTGPSYEILPLKI
                     YSMVKVGVSPEVNALATILLVLSLVMVIASQLIARDKTKGNTGDVK"
     gene            2290..3336
                     /gene="potD"
                     /locus_tag="JN001_001986"
     CDS             2290..3336
                     /gene="potD"
                     /locus_tag="JN001_001986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     substrate-binding protein PotD"
                     /protein_id="HAY9053228.1"
                     /translation="MKKWSRHLLAAGALALGMSAAHADDNNTLYFYNWTEYVPPGLLE
                     QFTKETCIKVIYSTYESNETMYAKLKTYKDGAYDLVVPSTYYVDKMRKEGMIQKIDKS
                     KLTNFSNLDPDMLNKPFDPNNDYSIPYIWGATAIGVNGDAVDPKSVTSWADLWKPEYK
                     GSLLLTDDAREVFQMALRKLGYSGNTTDPKEIEAAYNELKKLMPNVAAFNSDNPANPY
                     MEGEVNLGMIWNGSAFVARQAGTPIDVVWPKEGGIFWMDSLAIPANAKNKEGALKLIN
                     FLLRPDVAKQVAETIGYPTPNLAARKLLSPEVANDKTLYPDAETIKNGEWQNDVGAAS
                     SIYEEYYQKLKAGR"
     gene            complement(3492..4313)
                     /gene="cobB"
                     /locus_tag="JN001_001987"
     CDS             complement(3492..4313)
                     /gene="cobB"
                     /locus_tag="JN001_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HAY9053229.1"
                     /translation="MLSRRGHRLSRFRKNKRRLRERLRQRIFFRDKVVPEAMEKPRVL
                     VLTGAGISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQP
                     KIQPNAAHLALAKLQDALGDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQ
                     VLDWTGDVTPEDKCHCCQFPAPLRPHVVWFGEMPLGMDEIYMALSMADIFIAIGTSGH
                     VYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLLKGL"
     gene            complement(4329..5240)
                     /gene="nagK"
                     /locus_tag="JN001_001988"
     CDS             complement(4329..5240)
                     /gene="nagK"
                     /locus_tag="JN001_001988"
                     /EC_number="2.7.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine kinase"
                     /protein_id="HAY9053230.1"
                     /translation="MYYGFDIGGTKIALGVFDSGRQLQWEKRVPTPRDSYDAFLDAVC
                     ELVAEADQRFGCRGSVGIGIPGMPETEDGTLYAANVPAASGKPLRADLSARLDRDVRL
                     DNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLIFNGKPITGKSYITGEFGHMRL
                     PVDALTMMGLDFPLRRCGCGQHGCIENYLSGRGFAWLYQHYYHQQLQAPEIIALYNQG
                     DEQARAHVERYLDLLAVCLGNILTIVDPDLVVIGGGLSNFPAITTQLADRLPRHLLPV
                     ARVPRIERARHGDAGGMRGAAFLHLTD"
     gene            complement(5269..6513)
                     /gene="lolE"
                     /locus_tag="JN001_001989"
     CDS             complement(5269..6513)
                     /gene="lolE"
                     /locus_tag="JN001_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolE"
                     /protein_id="HAY9053231.1"
                     /translation="MAMPLSLLIGLRFSRGRRRGGMVSLISVISTIGIALGVAVLIVG
                     LSAMNGFERELNNRILAVVPHGEIEAVNQPWTNWQEALDKVQKVPGIAAAAPYINFTG
                     LVESGANLRAIQVKGVNPQQEQRLSALPSFVQGDAWRNFKAGEQQIIIGKGVADALKV
                     KQGDWVSIMIPNSNPEHKLMQPKRVRLHVAGILQLSGQLDHSFAMIPLADAQQYLDMG
                     SSVSGIALKMTDVFNANKLVRDAGEMTNSYVYIKSWIGTYGYMYRDIQMIRAIMYLAM
                     VLVIGVACFNIVSTLVMAVKDKSGDIAVLRTLGAKDGLIRAIFVWYGLLAGLFGSLCG
                     LIIGVVVSLQLTPIIERIEKLIGHQFLSSDIYFIDFLPSELHWLDVFYVLVTALLLSL
                     LASWYPARRASNIDPARVLSGQ"
     gene            complement(6513..7214)
                     /gene="lolD"
                     /locus_tag="JN001_001990"
     CDS             complement(6513..7214)
                     /gene="lolD"
                     /locus_tag="JN001_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309522.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter
                     ATP-binding protein LolD"
                     /protein_id="HAY9053232.1"
                     /translation="MNKILLQCDNLCKRYQEGSVQTDVLHNVSFSVGEGEMMAIVGSS
                     GSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDF
                     TALENVAMPLLIGKKKPAEINSRALEMLKAVGLEHRANHRPSELSGGERQRVAIARAL
                     VNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEM
                     RDGRLTAELSLMGAE"
     gene            complement(7207..8406)
                     /gene="lolC"
                     /locus_tag="JN001_001991"
     CDS             complement(7207..8406)
                     /gene="lolC"
                     /locus_tag="JN001_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004976588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit LolC"
                     /protein_id="HAY9053233.1"
                     /translation="MYQPVALFIGLRYMRGRAADRFGRFVSWLSTIGITLGVMALVTV
                     LSVMNGFERELQNNILGLMPQAILSSEHGSINPQQLPETAVKLDGVNRVAPITTGDVV
                     LQSARSVAVGVMLGIDPAQKDPLTPYLVNVKQTDLEPGKYNVILGEQLASQLGVNRGD
                     QIRMMVPSASQFTPMGRIPSQRLFNVIGTFAANSEVDGNEMLVNIEDASRLMRYPAGN
                     ITGWRLWLDEPLKVDSLSQQKLPEDSKWQDWRDRKGELFQAVRMEKNMMGLLLSLIVA
                     VAAFNIITSLGLMVMEKQGEVAILQTQGLTPRQIMMIFMVQGASAGIIGAILGAALGA
                     LLASQLNNLMPIIGVLLDGAALPMAIEPLQVIVIALVAMAIALLSTLYPSWRAAATQP
                     AEALRYE"
     gene            8668..9741
                     /locus_tag="JN001_001992"
     CDS             8668..9741
                     /locus_tag="JN001_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HAY9053234.1"
                     /translation="MKQKELWINQIKGLCICPVVIYHSVITFYPHMTTFPHPLSEVLS
                     KCWIYFNLYLAPFRMPVFFFISGYLIRRYIDSVPWGNCLDKRIWNIFWVLALWGVVQW
                     LALSALNQWLAPERDLSNASNAAYADSTGEFLHGMITASTSLWYLYALIVYFVVCKIF
                     SRLALPLFALFVLLSVAVNFVPTPWWGMNSVIRNLPYYSLGAWFGATIMTCVKEVPLR
                     RHLLMASLLTVLAVGAWLFTISLLLSLVSIVVIMKLFYQYEQRFGMRSTSLLNVIGSN
                     TIAIYTTHRILVEIFSLTLLAQMNAARWSPQVELTLLLVYPFVSLFICTVAGLLVRKL
                     SQRAFSDLLFSPPSLPAAVSYSR"
     gene            9869..13315
                     /gene="mfd"
                     /locus_tag="JN001_001993"
     CDS             9869..13315
                     /gene="mfd"
                     /locus_tag="JN001_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HAY9053235.1"
                     /translation="MPEQYRYTLPVKAGEQRLLGELTGAACATLVAEIAERHAGPVVL
                     IAPDMQNALRLHDEISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTLYQLPTMQ
                     RGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDSAGYRHVDQVMEHG
                     EYATRGALLDLFPMGSELPYRLDFFDDEIDSLRVFDVDSQRTLEEVEAINLLPAHEFP
                     TDKAAIELFRSQWRDTFEVKRDPEHIYQQVSKGTLPAGIEYWQPLFFSEPLPPLFSYF
                     PANTLLVNTGDLETSAERFQADTLARFENRGVDPMRPLLPPQSLWLRVDELFSELKNW
                     PRVQLKTKHLPTKAANANLGFQKLPDLAVQAQQKAPLDALRKFLETFDGPVVFSVESE
                     GRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDKVRNLALICESDLL
                     GERVARRRQDSRRTINPDTLIRNLAELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEY
                     LMLTYANDAKLYVPVSSLHLISRYAGGAEENAPLHKLGGDAWSRARQKAAEKVRDVAA
                     ELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDR
                     LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEM
                     ISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHKE
                     RIKAMRANVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVV
                     REAILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMND
                     FHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLRGRVGRSHHQAYAWL
                     LTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDLEIRGAGELLGEEQSGSMETIGF
                     SLYMELLENAVDALKAGREPSLEDLTSQQTEVELRMPSLLPDDFIPDVNTRLSFYKRI
                     ASAKTENELEEIKVELIDRFGLLPDPARTLLDVARLRQQAQKLGIRKLEGNEKGGVIE
                     FAEKNHVNPAWLIGLLQKQPQHYRLDGPTRLKFIQDLSERKTRIEWVRQFMRELEENA
                     IA"
     gene            13459..14421
                     /gene="ldtC"
                     /locus_tag="JN001_001994"
     CDS             13459..14421
                     /gene="ldtC"
                     /locus_tag="JN001_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase LdtC"
                     /protein_id="HAY9053236.1"
                     /translation="MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGEN
                     KFHVVENDGGSLEAIAKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPRE
                     GIVINIAELRLYYYPPGKNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTAN
                     TRARYKAQGIELPAVVPAGPDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCI
                     RLRDDDIKTLFSQVTPGTKVNIINTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPI
                     TLNSAMQSFKDAAQTDAEVMQHVMDVRSGMPVDVRRHQVSPQTL"
     gene            complement(14504..14761)
                     /gene="bhsA"
                     /locus_tag="JN001_001995"
     CDS             complement(14504..14761)
                     /gene="bhsA"
                     /locus_tag="JN001_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple stress resistance protein BhsA"
                     /protein_id="HAY9053237.1"
                     /translation="MKNVKTLIAAAILSSMSFASFAAVEVQSTPEGQQKVGTISAKAG
                     TNLGSLEEQLAQKADEMGAKSFRITSVTGPNTLHGTAVIYK"
     gene            15002..15634
                     /gene="comR"
                     /locus_tag="JN001_001996"
     CDS             15002..15634
                     /gene="comR"
                     /locus_tag="JN001_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family copper-responsive transcriptional
                     repressor ComR"
                     /protein_id="HAY9053238.1"
                     /translation="MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLAD
                     LVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFA
                     AIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGE
                     IPTHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK"
     gene            complement(15696..16235)
                     /locus_tag="JN001_001997"
     CDS             complement(15696..16235)
                     /locus_tag="JN001_001997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper 2TM domain-containing protein"
                     /protein_id="HAY9053239.1"
                     /translation="MNKSMLAGIGIGVAAALGVAAVASLNVFERGPQYAQVVSATPIK
                     ETVKTPRQECRNVTVTHRRPVQDENRITGSVLGAVAGGVIGHQFGGGRGKDVATVVGA
                     LGGGYAGNQIQGSLQESDTYTTTQQRCKTVYDKSEKMLGYDVTYKIGDQQGKIRMDRD
                     PGTQIPLDSNGQLILNNKV"
     gene            complement(16462..17766)
                     /locus_tag="JN001_001998"
     CDS             complement(16462..17766)
                     /locus_tag="JN001_001998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY9053240.1"
                     /translation="MTTPLKKIVIVGGGAGGLEMATQLGHKLGRKKKAKITLVDRNHS
                     HLWKPLLHEVATGSLDEGVDALSYLAHARNHGFQFQLGSVIDIDREAKTITIAELRDE
                     KGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFHQEMLNLFLK
                     YSANLGANGKVNIAIVGGGATGVELSAELHNAVKQLHSYGYKGLTNEALNVTLVEAGE
                     RILPALPPRISAAAHSELTKLGVRVLTQTMVTSADEGGLHTKDGEYIEADLMVWAAGI
                     KAPDFLKDIGGLETNRINQLVVEPTLQTTHDPDIYAIGDCASCTRPEGGFVPPRAQAA
                     HQMATCAMNNILAQINGKPLKNYQYKDHGSLVSLSNFSTVGSLMGNLTRGSMMIEGRI
                     ARFVYISLYRMHQIALHGYFKTGLMMLVGSINRVIRPRLKLH"
     gene            complement(18166..18708)
                     /locus_tag="JN001_001999"
     CDS             complement(18166..18708)
                     /locus_tag="JN001_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY9053241.1"
                     /translation="MIIYLHGFDSNSPGNHEKVLQLQFIDPDVRLISYSTRHPKHDMQ
                     HLLKEVDKMLQLNVDERPLICGVGLGGYWAERIGFLCDIRQVIFNPNLFPYENMEGKI
                     DRPEEYADIATKCVTNFREKNRDRCLVILSRNDEALNSQRTSEELHHYYEIVWDEEQT
                     HKFKNISPHLQRIKAFKTLG"
     gene            complement(18731..19756)
                     /gene="nagZ"
                     /locus_tag="JN001_002000"
     CDS             complement(18731..19756)
                     /gene="nagZ"
                     /locus_tag="JN001_002000"
                     /EC_number="3.2.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-N-acetylhexosaminidase"
                     /protein_id="HAY9053242.1"
                     /translation="MGPVMLDVEGYELDAEEREILAHPLVGGLILFTRNYHDPAQLRE
                     LVRQIRAASRNHLVVAVDQEGGRVQRFREGFTRLPAAQSFAALLGMEEGGKLAQEAGW
                     LMASEMIAMDIDISFAPVLDVGHISAAIGERSYHADPEKALAIASRFIDGMHEAGMKT
                     TGKHFPGHGAVTADSHKETPCDPRPQAEIRAKDMSVFSTLIRENKLDAIMPAHVIYSD
                     VDPRPASGSSYWLKTVLRQELCFDGVIFSDDLSMEGAAIMGSYAERGQASLDAGCDMI
                     LVCNNRKGAVSVLDNLSPIKAERVTRLYHKGSFSRQELMDSARWKASSTRLNQLHERW
                     QEEKAGH"
     gene            complement(19767..20591)
                     /gene="thiK"
                     /locus_tag="JN001_002001"
     CDS             complement(19767..20591)
                     /gene="thiK"
                     /locus_tag="JN001_002001"
                     /EC_number="2.7.1.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine kinase"
                     /protein_id="HAY9053243.1"
                     /translation="MPFRSNNPITRDELLSRFFPQFHPVTTFNSGLSGGSFLIEHQGQ
                     RFVVRQPHDPDAPQSAFLRQYRALSQLPASIAPKPHLYLRDWMVVDYLPGAVKTYLPD
                     TNELAGLLYYLHQQPRFGWRITLLPLLELYWQQSDPARRTVGWLRMLKRLRKAREPRP
                     LRLSPLHMDVHAGNLVHSASGLKLIDWEYAGDGDTALELAAVWVENTEQHRQLVNDYA
                     TRAKIYPAQLWRQVRRWFPWLLMLKAGWFEYRWRQTGDQQFIRLADDTWRQLLIKQ"
     gene            complement(20575..21213)
                     /gene="lpoB"
                     /locus_tag="JN001_002002"
     CDS             complement(20575..21213)
                     /gene="lpoB"
                     /locus_tag="JN001_002002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator LpoB"
                     /protein_id="HAY9053244.1"
                     /translation="MTKMSRYALITALAMFLAGCVGQREPAPVEEVKPAPEQPAEPQQ
                     PVPTVPSVPTIPQQPGPIEHEDRTAPPAPHIRHYDWNGAMQPIVSKMLGADGVTAGSV
                     LLVDSVNNRTNGSLNAAEATETLRNALANNGKFTLVSAQQLSMAKQQLGLSPQDSLGT
                     RSKAIGIARNVGAHYVLYSSASGNVNAPTLQMQLMLVQTGEIIWSGKGAVSQ"
     gene            complement(21227..21604)
                     /locus_tag="JN001_002003"
     CDS             complement(21227..21604)
                     /locus_tag="JN001_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcfL family protein"
                     /protein_id="HAY9053245.1"
                     /translation="MRKGCFGLVSLVLLLLVGCRSHPEIPVNDEQSLVMESSLLAAGI
                     SAEKPVLSTSDIQPSASSTLYNERQKPVTVHYRFYWYDARGLEMHPLERPRSVTIPAH
                     SAVTLYGSANFLGAHKVRLYLYL"
     gene            complement(21607..21966)
                     /gene="hinT"
                     /locus_tag="JN001_002004"
     CDS             complement(21607..21966)
                     /gene="hinT"
                     /locus_tag="JN001_002004"
                     /EC_number="3.9.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415621.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine nucleoside phosphoramidase"
                     /protein_id="HAY9053246.1"
                     /translation="MAEETIFSKIIRREIPSDIVYQDDLVTAFRDISPQAPTHILIIP
                     NILIPTVNDVSAEHEQALGRMITVVAKIAEQEGIAEDGYRLIMNTNRHGGQEVYHIHM
                     HLLGGRPLGPMLAHKGL"
BASE COUNT         5600 a         5900 c         5575 g         5392 t
ORIGIN      
        1 cgacgagtgg aaaccaaaac ggttcagtct cccaataaca aacactaccc tggtgaaata
       61 cggaaaacta ggatacatcg ttccaagacc acaaaaaatt cgtgggcgtt ggctgataga
      121 tcgccgagca gtatttgttg ggccaggtga aacgggaatt gcgccggaaa ttcatactgg
      181 cgatgatgat gcactgaagg agattttaac tcatgtcacc gaggccacga aaaaacagca
      241 ctgacgtagc cggtctttac gaaaagtttg atcgcagaac tggcagagtt tactaccagt
      301 ataaaaatcc tgtgactgga aaatttcacg gactcggaac agacaaaggt aaggcagaaa
      361 aaatcgcttc cacagccaat cagcgaatag ctgcagcaga agctgaatat ttcatgcgca
      421 aaattgatga aagtccgtca gcaacaaaac gtcggggtat cagattaaag gcatgggttg
      481 atcgatatct gaaaatacag gacacgcgac tgaaaaatgg agatattgca gctacaactc
      541 acaaagaaaa aactcgaatg gctgcatacc tggtttcccg tctgggaaac cacccattga
      601 aagaactgga agtaagagac tttgcattaa tactggatga gtggctggat aaagacatgg
      661 tcagcacagc gagagtaaat cgtggattat gggttgatat ttataaagaa gcacagcatg
      721 caggggaagt tcctcctgga tggaatcctc cggaggctac ccgtaaaccg atccctaaag
      781 taaccagagc caggctcacc atggaagact ggcaaaaaat ttacaatgca acgcctgaaa
      841 aacactttat ccgtaacgca atgcttcttg cgattgttac tggtcagcgc cgtgatgaca
      901 tttgccacat gcgtttttca gatgtgtgga acgaacactt gcatatcacc cagggaaaaa
      961 ccggaatgcg tctggcgtta ccgcttacac tacgctgtga tgccattggg ataacgttaa
     1021 aagaagttat tgatgggtgc cgagacagaa tattaagtcc atatctaatc catagtcggc
     1081 accagaaaca accgaagccg atgagtaaag acaacctgag cgactacttt gccaaagcac
     1141 gggatctggc tgggataatt ccaccagcag gaaaaactcc gccaacattt catgaacaac
     1201 gctctctatc agaacggctg taccgtgcac agggtatcga tacaaaaaca ttactaggac
     1261 ataaagtcca ggcaaccacc gatcgctata acgatactcg aggtcaggaa tgggtttaag
     1321 ctggttattt gacaaacacc atatggaata tccgtcacca tctcaggaaa aaagtgttgt
     1381 aaaatgcgtg gcctagtttt ggggaaacgt tttggagaga ttttggagaa aggaaaaaat
     1441 tgaataaatt caaaatcctg aaagtgctcc accttatgaa taagaaggtg gaactcgaat
     1501 gatcggtcga ctgcttcgcg gcggttttat gaccgctatc tacgcgtacc tgtatatccc
     1561 aatcattatt ttgattgtga actcctttaa cagctcgcgc tttggcatca actggcaggg
     1621 ttttaccacc aaatggtata gcctgctgat gaacaacgac agcctgttac aggcagcgca
     1681 gcattcacta acaatggcgg tgttttcggc gacgtttgct acgcttatcg gttcactgac
     1741 ggcagttgcg ctgtaccgtt atcgctttcg cggtaagccg ttcgttagcg gaatgctgtt
     1801 tgtggtaatg atatcaccag atatcgtgat ggcaatttcg ctgctggtgc tgtttatgct
     1861 gctgggtatt cagcttggct tctggtcgct gctgttctcg catatcacct tctgcctgcc
     1921 atttgtggtg gtgacggtgt attcgcgcct gaaaggtttt gacgtgcgga tgctggaagc
     1981 ggcgaaagat ctcggtgcca gcgaatttac aattctgcga aaaatcatac tgccactggc
     2041 aatgccagcg gtggcagcgg gctgggtgtt aagctttacc ctgtcgatgg acgatgtggt
     2101 agtttcttcg ttcgtcaccg gaccaagtta tgaaattctg ccgttaaaaa tttattcgat
     2161 ggtcaaagtc ggcgtatcgc cggaagttaa cgcgctggca accatattac tggtgctgtc
     2221 gctggtgatg gttattgcca gtcagcttat tgctcgtgat aaaacgaaag gtaacacagg
     2281 ggacgttaaa tgaaaaaatg gtcacgccac ctgctcgcgg cgggtgctct ggcactgggc
     2341 atgagcgccg ctcacgccga tgacaacaac acgctgtatt tctacaactg gaccgagtac
     2401 gtgccgccag gactgcttga acagttcacc aaagaaacct gtattaaggt tatctattcg
     2461 acttacgagt cgaacgaaac catgtacgcc aagctgaaaa cgtacaaaga cggtgcgtat
     2521 gacctggtgg ttccttcaac ctattacgtc gataaaatgc gtaaagaagg gatgatccag
     2581 aagatcgaca agtcgaagtt aacgaacttc agcaatctcg atccagacat gctcaacaag
     2641 ccttttgacc cgaataacga ctactccatt ccgtatatct ggggggcgac ggcgattggt
     2701 gttaacggtg atgcggtgga tccgaaatct gtcaccagct gggccgatct gtggaagcca
     2761 gagtacaaag gcagcctgct gttgaccgac gatgcccgtg aagtgttcca gatggcgctg
     2821 cgtaagctgg gctattccgg taacaccacc gatccgaaag agattgaagc tgcatataac
     2881 gagctgaaaa aactgatgcc aaacgtcgca gcgtttaact ccgataaccc ggctaacccg
     2941 tacatggaag gcgaagttaa cctcggcatg atctggaacg gttctgcttt cgttgcacgc
     3001 caggcgggta cgcctattga cgtggtgtgg ccgaaagaag gcggcatatt ctggatggac
     3061 agcctggcga tcccggcaaa tgccaaaaac aaagaaggcg cgctgaaatt gatcaacttc
     3121 ctgctgcgcc cggatgtggc aaaacaggtt gctgaaacta tcggttatcc aacgccaaac
     3181 cttgcggcgc gtaagctgtt aagtccagaa gtggcgaacg ataaaacgct ctacccggat
     3241 gctgaaacca ttaaaaatgg cgaatggcag aatgacgttg gcgcagccag cagcatttat
     3301 gaagagtatt atcagaagct gaaagcagga cgttaattca gcaagcgggc ggtggtatta
     3361 ccgcccgttt tttatttagc aaggatgtgg ctaatgagtc aggacagtag agttttatcc
     3421 gactctttcg tcggtattgt ggtccgctcg taggcctgat aagcgtagcg catcaggcaa
     3481 tgcttcctgc tttataatcc cttcagcaac ttttcaacaa actcaggcac cacctggctt
     3541 gccgggccgt aatatttctc ggcaaattca ttaccgacct gacttggttc gagattcagt
     3601 tccacggtgt gcgcgccatg cagtttcgct tcgtgaacaa acccagccgc cggataaaca
     3661 tgcccggaag taccaatggc aatgaaaata tcagccatcg acaacgccat ataaatttca
     3721 tccatgccga gtggcatttc gccaaaccaa acgacgtgcg ggcgcaaggg tgccgggaac
     3781 tggcaacaat ggcatttatc ttctggcgta acgtctccgg tccagtcgag aacctgacca
     3841 ctttgcgaac aacgaacttt cagcaattcc ccatgcatat gaatgacatt ggtattacct
     3901 gcgcgttcat gcaggttgtc tatattctgc gttaccagca aaaagcgatc gccgagagcg
     3961 tcttgcagtt tagccagcgc aagatgcgcg gcgttaggct gaatttttgg ctgctgcagc
     4021 tgtcgacgac gggcgttata aaacgcttgc accagttcag gatcgcgatc gaaaccttcc
     4081 ggcgttgcca catcttcaac ccgatgttct tcccacaggc catctgcggc gcgaaaggta
     4141 cgaatacctg attccgcaga aattcctgcc cctgtcagta cgagtactct tggtttttcc
     4201 attgcttccg gcaccacttt atctctgaaa aaaatacgct gacgcaaacg ctcgcgcagg
     4261 cggcgtttat ttttacgaaa acgacttaac cgatgacccc gacgcgacag catagcaacc
     4321 tctgttgttt aatcggttag atgtaggaag gccgcaccac gcattcctcc cgcatcaccg
     4381 tggcgcgcgc gttcaatgcg cggaacacga gctacaggta agagatgacg aggcagcctg
     4441 tccgccagtt gcgttgtgat tgccgggaaa ttcgataagc caccaccaat gacgaccagg
     4501 tcagggtcaa caatggtcag gatatttccc agacaaaccg ctaataaatc cagataacgc
     4561 tcaacgtgcg cccttgcctg ctcatcgcct tgattataaa gcgcaataat ttcgggagcc
     4621 tgcaactgtt gatgataata gtgttgatac agccacgcaa aaccgcgacc agacagataa
     4681 ttctcaatgc agccatgctg accacagccg cagcggcgta acgggaaatc caaccccatc
     4741 atggttaacg catcaaccgg cagacgcata tggccaaact cgccggtaat gtagctttta
     4801 ccggtaatcg gtttgccgtt gaaaatcagc ccaccgccaa cgccggtacc aagaatcaac
     4861 cccatcacca gtggatattg cgtaaattca tcatcccagg cttctgaaag ggcaaaacag
     4921 ttggcatcgt tatcaaggcg tacatcgcga tcaagacgtg cgctcaggtc ggcacgcagc
     4981 ggtttaccgc tggcagcggg gacattggcg gcatacagcg taccatcttc tgtttccggc
     5041 attcccggta taccaatgcc gacagaacct ctacagccaa aacgttgatc agcttcggct
     5101 accagctcgc acactgcatc taaaaatgcg tcatagctgt cacgcggtgt cggcacccgc
     5161 ttttcccact gcaactgccg accgctatca aacacgccaa gcgcaatttt tgttccacca
     5221 atatcaaacc cgtaatacat tgccgctcct tgttttaatg tactgccttt actggccgct
     5281 aaggactcgc gcagggtcaa tattactggc gcgccgcgcc ggataccaac ttgccaaaag
     5341 actcagcaac aatgctgtga ccagtacgta gaagacgtcc agccagtgca attccgatgg
     5401 caggaagtca ataaaataga tatcgctgga gaggaactga tgaccgatca gcttttcaat
     5461 ccgctcaata atcggggtaa gttgcagtga aacaactacg ccgataatca gcccacacag
     5521 gctgccgaac agccctgcca gcaatccata ccagacaaag atggcgcgaa ttaaaccatc
     5581 tttcgccccc agcgttctta atactgcgat atcgccactc ttatctttca ccgccatcac
     5641 taaggtggag acgatgttga aacaggccac gccaatcacc agtaccatcg ccagatacat
     5701 aatggcgcgg atcatctgga tatcgcgata catatagccg taagtaccaa tccagctttt
     5761 aatataaaca tagctgttgg tcatttcacc cgcatcgcgt accagcttat tggcgttgaa
     5821 aacatccgtc attttaaggg caatacctga cacgctggaa cccatatcaa gatattgttg
     5881 ggcatccgcc agcgggatca tggcaaaact gtgatcgagt tggccactca actgcaaaat
     5941 acccgcaacg tgcaaacgca cacgttttgg ctgcatcagt ttatgctcag ggttcgagtt
     6001 ggggatcatg atcgacaccc aatcgccctg cttcactttc agcgcatccg ccacgccttt
     6061 gccgatgata atttgctgtt cgcccgcttt aaaattgcgc cacgcatccc cctgaacaaa
     6121 cgagggtaat gcgctcagac gctgttcctg ttgtgggtta acgcccttca cctggattgc
     6181 gcgcagattc gctccacttt ccaccagccc ggtgaaattg atatacggcg cagcggcggc
     6241 aatacccggc actttctgca ctttatccag tgcttcctgc cagttagtcc atggctgatt
     6301 taccgcttcg atttcaccat gcggcaccac cgccagaatg cggttattca gttcgcgttc
     6361 aaagccgttc atcgcgctta agccgacgat caataccgcc acaccgaggg caatgccaat
     6421 ggtagaaatg acggagatca gcgacaccat gccgccgcgc cgccgtccgc gactaaaacg
     6481 caggccaatt aataacgata aaggcatcgc cattactccg cccccatcag gctcagttcc
     6541 gccgtcagac gtccatcacg catttctaac tggcggctca tacgtttcgc cagttgcagg
     6601 tcgtgagtaa ccaccaggaa ggcggtgccc tgcaagcgat tcaattcccc aagcaactgg
     6661 aagatgctgt cggcgttacg cgcatcgagg ttaccggtag gctcatccgc cagtaccaga
     6721 cgcggattat tgaccagcgc acgggcaatc gctacacgct ggcgttcgcc gccagaaagt
     6781 tcagatgggc ggtgattcgc acgatgctcc agccccaccg cttttaacat ctccagtgca
     6841 cggctgttga tttcagcggg ctttttcttg ccaatcagca gcggcatagc cacgttttcc
     6901 agggcggtaa aatccggcag caggtggtga aactgataaa taaagcccag tttctggttg
     6961 cgcagttctg cttttgctgc cgacgacagt ttgctcatcg gttgaccgtt aaagatcaca
     7021 tcgccggagg ttggcgtatc cagtccgccc agcaggtgca gcaaggtgct tttaccggaa
     7081 ccagagctac cgacgatcgc catcatttca ccttcgccga cgctgaaact gacattgtgc
     7141 agtacatcgg tttgcacact gccttcctga tagcgtttgc acaggttgtc gcattgcaac
     7201 aggatcttat tcataacgta aagcctcagc gggttgtgtg gcggcagcgc gccatgaagg
     7261 gtaaagcgta gacagcagcg cgatagccat cgccaccagc gcaataacaa tgacctgtaa
     7321 aggttcgata gccatcggca gcgccgcgcc atcaagcagg acgccgatta ttggcatcag
     7381 attatttaac tggctggcaa gcagtgcgcc aagcgccgct ccgaggatcg caccgataat
     7441 cccggcgctg gccccttgca ccataaagat catcatgatt tgtcgcggag ttaagccttg
     7501 cgtttgcagg atcgctactt cgccctgctt ctccatcacc atcagcccca gcgaggtaat
     7561 aatgttaaac gccgcaacgg cgacaatcag gctcagcagt aaacccatca tatttttttc
     7621 catgcgtacg gcctggaaca actcgccttt acgatcacgc cagtcctgcc atttgctgtc
     7681 ttcaggcagt ttttgctgac ttaatgagtc gactttcagc ggctcatcca gccacaaacg
     7741 ccagccggta atattgcctg ccggataacg catcagacgc gaggcatcct caatattcac
     7801 cagcatttca ttgccatcga cttcactgtt ggcggcgaaa gtgccaatca cattgaacag
     7861 gcgctgactt ggaatacgcc ccatcggcgt gaactggctg gcagatggta ccatcatgcg
     7921 gatttgatca ccgcgattaa cgcctagctg tgaggcaagt tgttcgccga ggatgacatt
     7981 atatttcccc ggctcgaggt cagtttgttt cacattgacc agatacggcg ttagtggatc
     8041 tttttgcgcc ggatcgatac ccagcatcac cccgaccgcc acgctgcgcg cgctttgcag
     8101 taccacatca ccggtagtaa taggtgcgac gcgattaacg ccgtccagtt tgactgccgt
     8161 ttccgggagt tgctgcgggt taatagagcc atgctcagaa gagagaattg cctgtggcat
     8221 caggccaagg atgttgtttt gcagctcgcg ctcaaagccg ttcatcactg acaatactgt
     8281 gaccagcgcc atcaccccga gggtaatgcc gatggtagaa agccaggaga cgaaacgacc
     8341 gaagcgatcc gctgcacgcc cacgcatgta acgcaggcca ataaatagag cgacaggttg
     8401 gtacatgaaa tccgtctggt tgctgtagca aagacacgag tatataagcg aaagcaagat
     8461 gggtaaacgt ctgaactgta agtgatcgtc agggctaatc tgaaaagccc ccgtaaatca
     8521 atcggctaaa ttgccatgtt ttatcatcaa tcttgccgcc tgatcttaat ctgaaaaatc
     8581 atccaataca gacagatacc cattacacct cgggtcataa cccgcaggat caaccgcatg
     8641 taaattaaaa aagagcgtgt tgtcctgatg aaacaaaaag agctatggat taaccagatc
     8701 aaagggttat gtatttgtcc ggtggtgatt tatcactcgg tcattacctt ttatccgcat
     8761 atgaccactt ttccgcatcc gttatcggaa gtcctgagca aatgctggat ctatttcaat
     8821 ctttaccttg caccctttcg tatgccggtt tttttcttta tatccggcta tttgattcgc
     8881 cgctatatcg acagcgtacc gtggggaaat tgtctcgata aacggatctg gaacatcttc
     8941 tgggtgctgg cgctttgggg cgtggtgcag tggctggcgt taagtgcgct gaaccagtgg
     9001 ctggcacctg agcgcgattt aagcaatgcc tccaatgccg cttatgccga ttccaccggt
     9061 gagttcctgc acgggatgat caccgccagc accagcttgt ggtatctgta tgcgttaatt
     9121 gtctatttcg tggtatgtaa aatttttagc cgtctggcgc tgccactatt cgccttgttt
     9181 gtactgctga gtgtggcggt taatttcgtt cccacgccgt ggtggggaat gaacagtgtg
     9241 atccgcaatt tgccttatta cagccttggc gcatggtttg gcgcaacaat aatgacctgt
     9301 gttaaagagg taccgttgcg ccgccatctg ctgatggctt ctttgcttac cgttctggcg
     9361 gtcggtgcct ggttgtttac tatctcgctg ctgttgtcgc tggtatcgat tgtggtgatc
     9421 atgaagctgt tttatcagta cgagcaacga ttcggtatgc gctccaccag cctgctgaat
     9481 gtgattggct ccaacaccat tgctatctac accacccatc gcattctggt tgaaatattc
     9541 agcttaactc tgcttgcgca aatgaacgca gcacgctggt cgccgcaagt cgaactgaca
     9601 ctcctgctgg tttatccctt tgtcagtttg ttcatctgta ctgttgcggg cttgctggta
     9661 agaaaacttt cacagcgtgc attcagcgat ctgttgttct ccccgccttc actgcccgct
     9721 gccgtcagtt actcccgcta agccatcgcc ccagccgggg cgattcaatt tgctaaacca
     9781 tgtcgattac ggataatgaa cagcattgct tatcagagat atgcccccat atgttgaggc
     9841 atatcctaac gagaatctga caaccgttat gcctgaacaa tatcgttata cgctgcccgt
     9901 caaagcgggt gagcagcgtc tgctgggcga gttaaccggc gcagcctgtg caacgctggt
     9961 agcggaaatt gccgaacgtc acgccggtcc ggtggtactc attgcaccag atatgcaaaa
    10021 tgctctgcgt ttgcatgatg aaatcagtca gttcaccgat cagatggtga tgaatctggc
    10081 ggactgggaa actcttccct acgacagctt ttcgcctcat caggacatta tctcctcgcg
    10141 cctttccacc ctttaccagc taccgacgat gcagcgtggc gtactgattg ttccggtgaa
    10201 tacgcttatg cagcgcgttt gcccacacag ttttctccac ggtcatgcgc tggtgatgaa
    10261 aaaaggtcag cgcctgtcac gagatgcatt acgaacccaa ctggacagcg ccggttatcg
    10321 ccatgttgac caggtgatgg agcacggcga atacgccacg cgcggcgcgt tgctggatct
    10381 cttcccgatg gggagtgagc tgccttatcg tcttgatttc tttgatgatg aaatcgacag
    10441 cctgcgggtg tttgacgtcg acagccagcg cacgctggag gaagtagaag cgatcaatct
    10501 gctgcccgcg cacgaatttc cgaccgataa agcggcaatt gaactgttcc gcagccagtg
    10561 gcgcgatacc ttcgaagtga agcgcgatcc ggaacatatt taccagcaag tgagtaaagg
    10621 cacattacct gccgggatcg agtactggca gccattgttc ttcagcgaac cactgccgcc
    10681 gctgttcagt tatttccctg ccaatacctt gctcgtgaat actggcgatc tggaaaccag
    10741 tgccgaacgt ttccaggctg acacgctggc gcgttttgag aatcgcggcg tcgatccgat
    10801 gcgcccgctg ttgccaccac aatcgctctg gctgcgggtg gacgagctct tctcagagct
    10861 gaaaaactgg ccccgggtgc agctaaaaac taaacattta ccgacaaaag ccgcgaatgc
    10921 caatttaggt ttccagaaac tgccagacct agccgttcag gcgcaacaaa aagcgccgct
    10981 ggatgcgctg cgtaagttcc tcgagacttt cgacggtccg gtggtgttct cggtagaaag
    11041 tgaaggtcgc cgtgaagcgc tgggtgaact gctcgcacga attaaaattg ctccgcaacg
    11101 cattatgcgt cttgatgaag ccagcgaccg tgggcgttat ctgatgattg gcgctgccga
    11161 acatggtttt gtcgataagg tgcgtaatct ggcgctgatc tgcgaaagcg atctgctcgg
    11221 tgaacgtgtt gcccgccgtc gtcaggattc tcgccgcacc atcaaccccg atacactgat
    11281 ccgtaacctt gcggagctgc atattggtca gccggtggtc catctggagc acggtgtcgg
    11341 gcgctatgcc ggaatgacca cgctcgaagc gggcggcatt actggcgagt atttgatgct
    11401 cacctatgcc aacgacgcca aactgtatgt tccggtgtcg tcactgcatc tgattagccg
    11461 ttacgcaggt ggcgcggaag aaaacgcccc gctgcataaa cttggcggcg atgcgtggtc
    11521 acgcgcgcgg cagaaagcgg cggaaaaagt gcgtgatgtg gcggcggaat tgctggatat
    11581 ctacgcgcaa cgcgccgcca aagagggctt cgcgtttaaa cacgatcgtg agcagtatca
    11641 gttgttctgc gacagcttcc cgtttgaaac cacgccggat caggcgcagg ccattaatgc
    11701 ggtacttagc gacatgtgtc agccgctggc aatggatcgt ctggtgtgcg gcgatgttgg
    11761 ctttggtaaa acagaagtgg cgatgcgcgc cgctttcctg gcagtagata accacaagca
    11821 ggtggcggtg ttggtgccta ccacccttct cgcgcagcag cattacgaca acttccgcga
    11881 ccgtttcgcc aactggccgg tacgtatcga aatgatctcc cgtttccgca gcgccaaaga
    11941 gcagacgcaa atccttgcgg aagtggcgga agggaaaatc gatattctga tcggtacgca
    12001 caaactgctg caaagtgacg tcaagtttaa agatttaggc ctgctgattg tcgatgaaga
    12061 acaccgcttc ggggtgcgtc ataaagagcg cattaaagcg atgcgcgcga acgtggatat
    12121 tctgacgctt actgcaacgc cgatcccacg cacgctgaat atggcaatga gcggaatgcg
    12181 tgacctgtcg attatcgcca cgccgcccgc ccgtcgtctg gcagttaaaa cctttgtccg
    12241 tgagtatgac agcctggtgg tccgggaggc gatcctgcgt gaaattttgc gcggggggca
    12301 ggtttattat ctctacaatg atgtggaaaa catccagaaa gctgccgaac ggctggcaga
    12361 actggtgcca gaagcgcgga tcgccatcgg tcacgggcag atgcgcgagc gcgaactgga
    12421 acgggtgatg aatgatttcc atcatcaacg tttcaacgtg ctggtttgta caaccattat
    12481 cgaaaccggg atcgacatcc cgacagccaa caccattatc attgaacgcg cggatcactt
    12541 cggtctggcg cagctgcacc agttacgcgg tcgcgtcgga cgttcacatc atcaggcata
    12601 tgcatggctg ctgacgccgc atccaaaagc gatgactacc gatgcacaaa aacgtcttga
    12661 agcgattgcc tcgctggaag atctcggtgc aggctttgcg ctggcaacgc acgatctgga
    12721 gatccgcggc gcgggtgaac tgcttggcga agaacaaagt ggctcaatgg aaaccatcgg
    12781 tttctcgctg tatatggagt tgctggaaaa cgccgtcgat gcactgaaag ccggacgcga
    12841 gccgtcgctg gaagatctca ccagccagca aacagaagtc gagctgcgga tgccgtcgct
    12901 attgccagat gatttcattc ctgacgtgaa tacgcgtttg tcgttctata aacgtattgc
    12961 cagcgccaaa acggaaaacg aactggaaga gatcaaagtc gagcttatcg atcgcttcgg
    13021 cctgctgccg gatccggcgc gtaccctgct ggatgttgcc cgtctgcgcc agcaagcgca
    13081 gaaactgggg atcaggaagc tggaaggtaa tgagaaaggc ggggtgatcg aatttgccga
    13141 gaagaatcac gttaatccgg cctggttgat tggtttgctg caaaaacagc cgcagcatta
    13201 ccgccttgat ggtccgacgc gcctgaaatt tattcaggat ttgagtgagc ggaaaacgcg
    13261 tatcgaatgg gtacgccagt ttatgcgtga actggaagag aacgcgatcg cttaatggta
    13321 aatcgggggc gtttctgcgc ccccatcggc aacatttaca aattctttgc acttccctgc
    13381 actatccgac actgtcacca tccataattc aggcttatct gtttattaca ataaccttat
    13441 atttattatg gatttttggt gatgatcaaa acgcgttttt ctcgctggct aacgtttttt
    13501 acgttcgccg ctgccgtggc gctggcgcta ccggcaaaag ccaacacctg gccgctgccg
    13561 ccagcgggca gtcgtctggt tggcgaaaac aaatttcatg tggtggaaaa tgacggtggt
    13621 tctctggaag ccatcgccaa aaaatataac gtcggctttc tcgctctgtt acaggctaac
    13681 cccggcgttg atccttacgt accgcgcgcg ggcagcgtgt taacgatccc gttgcaaacc
    13741 ctacttccag acgcgccgcg cgaaggcatt gtgatcaaca ttgcggagct gcgtctctat
    13801 tactacccgc cgggtaaaaa ttcggtaacc gtgtatccaa taggtattgg tcagttaggt
    13861 ggtgacacgc tgacaccgac aatggtgacc accgtttcag acaaacgtgc aaacccaacc
    13921 tggacgccaa cggcaaacac ccgcgcccgt tataaagcac agggaattga gttgcctgcg
    13981 gtagtgccgg ctggaccgga taacccaatg ggccatcatg cgattcgtct ggcggcctat
    14041 ggcggcgttt atttgcttca tggtacgaac gccgatttcg gcattggcat gcgggtaagt
    14101 tctggctgta ttcgtctgcg ggatgacgat atcaaaacac tctttagcca ggtcacccca
    14161 ggcaccaaag tgaatatcat caacactccg ataaaagtct ctgccgaacc aaacggtgcg
    14221 cgtctggttg aagtacatca gccgctgtca gagaagattg atgacgatcc gcagctgctg
    14281 ccaattacgc tgaatagcgc aatgcaatca tttaaagatg cagcacaaac tgacgctgaa
    14341 gtgatgcaac atgtgatgga tgtccgttcc gggatgccgg tggatgtccg ccgtcatcaa
    14401 gtgagcccac aaactctgta aatcctggat aaaaaaaatc cccgcgacac ggcatgtcgc
    14461 ggggaaaaaa tcagcagtag caggcattaa tgagggttaa tgcttattta taaattactg
    14521 ctgttccatg gagggtattc ggaccggtta cagaagtaat acggaaagat tttgcaccca
    14581 tctcatccgc tttttgcgcc agctgctctt ccagcgatcc cagatttgtc cccgctttag
    14641 cactgattgt accgactttt tgttggcctt ctggcgttga ctgaacttcg acagccgcaa
    14701 agctggcaaa tgacatggag cttaaaatcg ccgcagcgat gagggttttt acgtttttca
    14761 taatagtggc cttatgcaga tgaatgacgt cgcaagcaat tacttaacga tcgataacta
    14821 aatgacagat gtgatctgga tcacatacaa gatatttttt ataacaatca ttaattaatt
    14881 taaaaatctt taaatttcag ttaaatagaa agcaattatt tttatgggat ctggactggt
    14941 gaacggaggt gattattttt ataataatct ttcattcaca gtcaccaggt acaacggcat
    15001 catggcaact gactcaacac aatgtgtaaa aaaaagccgt ggccgcccaa aagtgttcga
    15061 tagggatgcc gcgcttgata aggccatgaa attgttctgg caacacggtt atgaagcgac
    15121 ttctcttgcg gacctcgtcg aagcgaccgg agccaaagcg cccacgctat acgcggaatt
    15181 taccaacaaa gaggggttat ttcgtgccgt tctcgaccgc tatatcgatc gttttgccgc
    15241 taagcatgaa gcacagctgt tttgtgaaga gaaaagcgtg gagtctgcgc tggctgacta
    15301 ttttgctgcc atcgccaact gctttaccag caaagacacc ccggcaggct gcttcatgat
    15361 caacaactgc accaccctct ccccagattc aggagatatc gccaatacgt tgaaatcacg
    15421 ccatgcgatg caagagcgca ctttgcagca gtttttatgt caacgacaag cgcgcgggga
    15481 aatcccgacc cactgtgacg tgacacatct ggcagaattc cttaattgta ttattcaggg
    15541 gatgtcgatc agcgcacgcg aaggtgcatc gctggaaaaa ctaatgcaga ttgccggaac
    15601 gactttgcgt ttatggcccg aactggtgaa ataagtcgca aaaaaagccc ctcagcctga
    15661 gcgaatgagg ggccaaattg cagagtacag ccttgttata ctttgttatt caaaatcagt
    15721 tgcccattac tatctagcgg gatctgcgta cccggatcgc ggtccatgcg gattttgccc
    15781 tgctgatcgc caatcttata ggtcacatca taaccgagca ttttttctga cttgtcatac
    15841 accgttttac aacgctgttg cgtagtcgtg taagtatcgc tttcctggag agagccctgg
    15901 atctggttac cggcatatcc accacccagc gcccccacaa cagtggcgac atctttaccg
    15961 cgaccaccgc caaactgatg ccctatcacg ccgccagcaa cagcgccgag caccgacccg
    16021 gtaatgcgat tttcatcctg caccggtcga cgatgggtca ctgtgacgtt gcgacactcc
    16081 tgacgcggtg ttttaaccgt ttccttgatt ggggttgcag aaacaacctg agcgtattgc
    16141 gggccacgtt caaacacgtt cagactggcc actgccgcta cgcccagcgc agctgcgaca
    16201 ccaatcccga tacccgccaa cattgattta ttcacgggaa cacctccttc tttgcagtta
    16261 tgccaatcat gcaagcgaag gagaaaagca gctatcagac agaagatgaa aagcgcggga
    16321 atggctggaa atacttaatg attcggagga gtctgaagga atgcctgatg cgacgcttaa
    16381 cgcgtcttat caggcctacc gctcgtacca tttgtccagg gcggatgagg cgtttatgcc
    16441 acatccgcca gtgtacgtcg attaatgcaa cttcaaacgc ggacggataa cgcggttaat
    16501 actccccacc agcatcatta atccggtttt aaagtaacca tgcagcgcaa tctgatgcat
    16561 tcggtatagc gagatatata caaagcgcgc aattcgtcct tcaatcatca ttgagccgcg
    16621 cgtcaagtta cccatcaggc taccaacggt ggagaagttc gacagcgata ccagtgaacc
    16681 atgatcttta tactgataat ttttcagcgg cttaccgttt atctgcgcca gaatattgtt
    16741 cattgcgcaa gtcgccatct ggtgtgcagc ctgagcacgc ggcggaacaa agcccccttc
    16801 cggacgcgtg catgacgcgc agtcgccaat agcgtaaatg tctggatcgt gggtggtttg
    16861 cagcgtcggt tccaccacca gctggttgat acggttagtt tcaagaccac cgatatcttt
    16921 caggaagtct ggcgctttga tcccggctgc ccacaccatc agatcagcct caatatattc
    16981 accatcttta gtgtgcaggc cgccttcatc agcactggtg accatggttt gcgtcagcac
    17041 gcgaacgcca agtttcgtta actcactatg ggccgcagca gagatgcgtg gcggtaatgc
    17101 aggcaaaata cgttctcccg cttctactag cgttacgttc agggcttcgt tggtcagacc
    17161 tttataaccg tagctgtgca gttgcttgac cgcgttatgc aactcagcgg agagttctac
    17221 acccgtcgcg ccgccaccga caatcgcaat gttcactttg ccattcgcgc ccaggttggc
    17281 ggagtatttc aggaacagat tcagcatctc ctggtggaag cgacgcgcct ggtgcgggtt
    17341 atcgaggaaa atgcagttct ctttgacgcc tggcgtattg aaatcgttag aggtgctacc
    17401 cagcgccatg accagggtat cataggcgat tttacgttcc ggaaccagca gttcaccttt
    17461 ctcgtcgcgt agttctgcaa tagtgattgt tttcgcttca cgatcaatat caatgacgga
    17521 acccaactgg aactggaaac catgattgcg cgcatgggcc agatagctca acgcatcgac
    17581 gccttcatca agcgagccag tcgccacttc gtgcagcagc ggtttccaca ggtggctgtg
    17641 gttacgatcg accagcgtaa ttttggcttt tttcttacgt cccagcttat gccccagctg
    17701 tgttgccatt tccagcccac cagcaccgcc gccgacaatc acaatctttt tcaatggcgt
    17761 agtcaacgtg acccccttaa atttattaac caattgttaa ttaatggtta ttaacatagc
    17821 tcttaattaa caacaggtta cagcaatgaa aatgttcttc gctattgaga ataacatgaa
    17881 tggtgcattg gtcataccaa aattgatgtt aatcaagttt tgttgctgaa aagataggcg
    17941 actttaccgg gtgagatcaa aaaatagagt ttattgttta ttatttgagc gaatttgtga
    18001 gagtgatata gagtgagggg tgtatgcagg gcgttcggta ggcctgataa gaggcgcatc
    18061 aggcattgat gctcgactgt cggatgcggc gtaaacgcct tatccgactt acagaattcg
    18121 gagcgcatca ggtaccggca aggttacctg atgcgacgag ggcatttacc cgagggtttt
    18181 gaacgcttta atgcgctgca aatgcgggga gatattcttg aatttgtgcg tctgctcttc
    18241 gtcccagaca atctcgtaat aatgatgcaa ctcttcagat gtccgctggc tgttaagcgc
    18301 ttcatcatta cgcgacaaaa tcaccaggca acgatcgcga ttcttctcgc ggaagttggt
    18361 cacacactta gtggcaatat cggcatactc ttccgggcga tcaatcttgc cttccatgtt
    18421 ctcataaggg aacaaattag ggttgaagat cacctggcgg atatcgcaaa gaaaaccaat
    18481 ccgttccgcc cagtatccgc ccagaccaac gccgcaaatc agcggacgct cgtcgacgtt
    18541 cagttgcaac attttgtcca cttctttaag cagatgctgc atatcatgtt tcggatgccg
    18601 cgtactgtag cttatcaagc gtacatccgg gtcaataaac tgcaattgta agactttctc
    18661 gtggttaccc ggactgttag agtcaaaacc gtgtaaatag ataatcatcg cttcctcaca
    18721 taagccaggg ttagtgacct gctttctctt cctgccagcg ttcatgtaac tgattcagac
    18781 gggtgctgct cgccttccag cgagccgagt ccatcagttc ctgtcgcgaa aatgaacctt
    18841 tatgatacaa acgtgtaaca cgttctgcct tgatcggtga cagattatct aacacgctga
    18901 cggccccttt acgattattg cagaccagga tcatatcgca acctgcgtcc agtgatgcct
    18961 gcccgcgttc ggcataactg cccataatcg cggcaccttc catcgataaa tcgtcagaga
    19021 aaattacacc gtcaaaacac agttcctgac gcaaaacggt tttcagccag taagaagaac
    19081 cgctcgccgg acgcggatca acatcactgt agatcacatg cgcaggcata atggcgtcga
    19141 gtttattttc gcggattaac gtgctgaaaa ccgacatatc tttggcacga atttccgctt
    19201 gcgggcgtgg gtcgcacggc gtctctttgt gtgaatctgc agttactgca ccgtgtcctg
    19261 ggaagtgttt cccggtcgtt ttcattccgg cttcatgcat cccatcaata aaccgactag
    19321 cgattgccag ggctttttct gggtcggcat gataagaacg ctcgccaatc gccgcgctga
    19381 tatgtcctac atccagcact ggcgcaaagc tgatatcaat atccatagcg atcatttcgc
    19441 tggccatcag ccaacccgcc tcttgcgcca gtttgccgcc ctcttccatt cccaacagcg
    19501 cagcaaagga ttgtgctgcc ggtaagcggg taaaaccttc gcgaaaacgc tgcacgcgtc
    19561 caccttcctg atctaccgcc accaccagat gattgcgcga tgctgcgcgg atctggcgca
    19621 ccagttcacg taactgggca ggatcatgat agttacgcgt aaagagaatc agccctccca
    19681 ccagcggatg cgccagtatt tcacgctctt ccgcgtccag ttcataacct tcgacatcca
    19741 acattactgg acccacactg ctctccttat tgttttatta atagctgccg ccaggtgtca
    19801 tcggccagcc tgataaattg ttgatcgccg gtttgtcgcc agcggtactc aaaccaccct
    19861 gctttgagca tcagcagcca gggaaaccat cgcctgacct gacgccataa ttgcgccgga
    19921 taaatcttcg cgcgagtggc atagtcattg accaattgcc ggtgctgttc agtattttcc
    19981 acccacaccg ccgccagttc cagcgcggta tcaccatctc cggcatactc ccagtcgatg
    20041 agttttaacc ctgatgcgct atgcactaaa tttccggcgt ggacatccat atgcaatgga
    20101 cttaagcgta aaggtcgtgg ttcccgcgct ttgcgcagac gttttaacat tcgcagccaa
    20161 cccacagtcc gccgcgccgg atcgctttgc tgccagtaca gttccagtaa cggcaacagc
    20221 gttattcgcc agccaaaacg tggttgttga tgtagataat acagcaagcc tgccagttcg
    20281 ttggtatccg gcaaatacgt ttttaccgcg ccgggcagat agtcgactac catccagtca
    20341 cggagatata aatgcggctt cggtgcaatg cttgcgggta gttgtgataa agcccgatac
    20401 tggcgcaaga acgcggactg cggcgcatca ggatcgtgcg gctgacgcac aacaaaacgc
    20461 tggccctgat gttcaatgag aaaactaccg ccactaagcc cactattaaa cgtcgtgacg
    20521 ggatgaaact gcgggaaaaa gcgcgacagc aattcgtcgc gcgtgatggg attattactg
    20581 cgaaacggca cctttacctg accagataat ttcgcccgtc tgcaccagca tcagctgcat
    20641 ttgtagggtc ggagcgttaa cgttgccaga ggcgctggag tacagcacgt aatgagcgcc
    20701 gacattgcgg gcaatgccta tggctttact acgggtgcct aaactgtcct gcggcgacaa
    20761 acctaactgt tgcttagcca tcgacagttg ctgggcggaa accagggtaa atttcccgtt
    20821 attagccagc gcatttcgca gcgtttcggt cgcttctgcg gcattcagcg aaccgttagt
    20881 acggttgtta acgctatcaa ccagcaggac gctacccgca gtcaccccgt cagccccaag
    20941 catcttactg actatcggct gcattgcgcc attccagtca taatggcgaa tatgcggcgc
    21001 aggcggtgcc gttcgatctt cgtgctcaat tgggcctggc tgctgcggga tcgtcggcac
    21061 cgagggcact gtggggacag gctgttgtgg ctcggctggt tgttccggcg ctggtttcac
    21121 ttcttctacc ggtgcaggtt cacgttgccc cacacacccg gcgagaaaca tcgccagcgc
    21181 ggtaatcaag gcgtagcgac tcatttttgt catcaagatt caccccttac aaatatagat
    21241 aaagtctgac tttgtgcgcc cccagaaaat tggcgctgcc gtacagcgtt accgccgaat
    21301 gtgcgggaat ggtaacgctg cgtggccttt ccagaggatg catctccagc cctctggcgt
    21361 cataccagta aaaacgataa tgaacggtaa cgggtttttg cctttcgtta taaagcgttg
    21421 aggatgctga aggttgaata tcagacgtcg aaaggacggg cttttctgca ctgatgcccg
    21481 cagccaataa agatgactcc atcaccagcg attgctcatc attcaccgga atttccggat
    21541 gtgaacgaca gcccaccagc agtaacaaca ccagagacac cagcccaaag catccttttc
    21601 tcatcgttac agacctttat gcgccagcat tggtcccagc ggacggccac ccaacaagtg
    21661 catatggatg tggtaaacct cttgtccgcc atggcggttg gtattcatga tcagacgata
    21721 gccatcttcg gcaatacctt cttgctcagc aatttttgcc actacggtga tcatgcgtcc
    21781 cagcgcctgc tcatgctcag ctgagacgtc gttcacagtc ggaatgagga tattcggaat
    21841 gatcagaata tgcgttggcg cttgcggcga aatatcgcga aacgccgtta ccagatcatc
    21901 ctggtagacg atatcggagg ggatctcacg acgaataatt ttgctgaata tagtttcttc
    21961 tgccacgaca ttttcctttt tcaaatagcc atgcgttgcg ccatgctacg ccgcgccaca
    22021 ctgcgagtat agagtatggt cgagttaaac ctgctctttc aaccttaact cacgatttct
    22081 taagcaaaaa atcgttttgc tgccgtatat atcgccatta ttcccatttc tgcctgcgaa
    22141 tgcgctgaaa agacattctc tgtttggttt acacgacaaa tatgaatgcg tatatttctc
    22201 atttgcattt acaaacaaaa ttattcgcac actaaatata atcgctcatc accctcctcc
    22261 ggcatgagcc tgacgacaac ataaaccatg agatttcaaa tgctttcaac acaatttaac
    22321 agggataatc aacatcaagc catcaccaaa ccgtcactac ttgccggttg catagcactg
    22381 gcactattac cttctgccgc ttttgctgca ccagccactg aagaaacggt gattgttgag
    22441 ggttcagcca cagctccaga tgatggc
//
LOCUS       DADMJE010000059        20788 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.060, whole genome shotgun sequence.
ACCESSION   DADMJE010000059 DADMJE010000000
VERSION     DADMJE010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20788)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20788)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20788
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.060"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(17..562)
                     /gene="hemG"
                     /locus_tag="JN001_002005"
     CDS             complement(17..562)
                     /gene="hemG"
                     /locus_tag="JN001_002005"
                     /EC_number="1.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="menaquinone-dependent protoporphyrinogen IX
                     dehydrogenase"
                     /protein_id="HAY9053247.1"
                     /translation="MKTLILFSTRDGQTREIASYLASELKELGIQTDVANVHRIEEPQ
                     WENYDRVVIGASIRYGHYHSAFQEFVKKHATRLNSMPSAFYSVNLVARKPEKRTPQTN
                     SYARKFLMSSQWRPDRCAVIAGALRYPRYRWYDRFMIKLIMKMSGGETDTRKEVVYTD
                     WEQVANFAREIAQLTNKPTLK"
     gene            complement(574..2025)
                     /gene="trkH"
                     /locus_tag="JN001_002006"
     CDS             complement(574..2025)
                     /gene="trkH"
                     /locus_tag="JN001_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004146450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Trk system potassium transporter TrkH"
                     /protein_id="HAY9053248.1"
                     /translation="MHFRAITRIVGLLVILFSGTMIIPGLVALIYRDGAGRAFTQTFF
                     VALAIGSMLWWPNRKEKGELKSREGFLIVVLFWTVLGSVGALPFIFSESPNLTITDAF
                     FESFSGLTTTGATTLVGLDSLPHAILFYRQMLQWFGGMGIIVLAVAILPILGVGGMQL
                     YRAEMPGPLKDNKMRPRIAETAKTLWLIYVLLTVACALALWFAGMDAFDAIGHSFATI
                     AIGGFSTHDASIGYFDSPTINTIIAIFLLISGCNYGLHFSLLSGRSLKVYWRDPEFRM
                     FIGVQFTLVVICTLVLWFHNVYSSALMTINQAFFQVVSMATTAGFTTDSIARWPLFLP
                     VLLLCSAFIGGCAGSTGGGLKVIRILLLFKQGNRELKRLVHPNAVYSIKLGNRALPER
                     ILEAVWGFFSAYALVFIVSMLAIIATGVDDFSAFASVVATLNNLGPGLGVVADNFTSM
                     NPVAKWILIANMLFGRLEVFTLLVLFTPTFWRE"
     gene            complement(2064..2678)
                     /locus_tag="JN001_002007"
     CDS             complement(2064..2678)
                     /locus_tag="JN001_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMPACT family protein"
                     /protein_id="HAY9053249.1"
                     /translation="MESWLIPAAPVTVVEEIKKSRFITMLAHTDGVEAAKAFVESVRA
                     EHPDARHHCVAWVAGAPDDSQQLGFSDDGEPAGTAGKPMLAQLMGSGIGEITAVVVRY
                     YGGILLGTGGLVKAYGGGVNQALRQLTTQRKTPLTEYTLQCEYSQLTGIEALLGQCDG
                     KIINSDYQAFVLLRVALPAAKVAEFSAKLADFSRGSLQLLAIEE"
     gene            complement(2678..4009)
                     /gene="pepQ"
                     /locus_tag="JN001_002008"
     CDS             complement(2678..4009)
                     /gene="pepQ"
                     /locus_tag="JN001_002008"
                     /EC_number="3.4.13.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Xaa-Pro dipeptidase"
                     /protein_id="HAY9053250.1"
                     /translation="MESLASLYKNHIATLQERTRDALARFKLDALLIHSGELFNVFLD
                     DHPYPFKVNPQFKAWVPVTQVPNCWLLVDGVNKPKLWFYLPVDYWHNVEPLPTSFWTE
                     DVEVIALPKADGIGSLLPAARGNIGYIGPVPERALQLGIEASNINPKGVIDYLHYYRS
                     FKTEYELACMREAQKMAVNGHRAAEEAFRSGMSEFDINIAYLTATGHRDTDVPYSNIV
                     ALNEHASVLHYTKLDHQAPEEMRSFLLDAGAEYNGYAADLTRTWSAKSDNDYAQLVKD
                     VNDEQLALIATMKAGVSYVDYHLQFHQRIAKLLRKHQIITDMSEEAMVENDLTGPFMP
                     HGIGHPLGLQVHDVAGFMQDDSGTHLAAPAKYPYLRCTRILQPGMVLTIEPGIYFIES
                     LLAPWREGQFSKHFNWQKIEALKPFSGIRIEDNVVIHENNVENMTRDLKLA"
     gene            4199..6416
                     /gene="fadB"
                     /locus_tag="JN001_002009"
                     /pseudo
     CDS             4199..6416
                     /gene="fadB"
                     /locus_tag="JN001_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001490315.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadB"
     gene            6426..7589
                     /gene="fadA"
                     /locus_tag="JN001_002010"
     CDS             6426..7589
                     /gene="fadA"
                     /locus_tag="JN001_002010"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadA"
                     /protein_id="HAY9053251.1"
                     /translation="MEQVVIVDAIRTPMGRSKGGAFRNVRAEDLSAHLMRSLLARNPA
                     LEAAALDDIYWGCVQQTLEQGFNIARNAALLAEVPHSVPAVTVNRLCGSSMQALHDAA
                     RMIMTGDAQACLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMMGLTAEMLARMHGI
                     SREMQDAFAARSHARAWAATQSGAFKNEIIPTGGHDADGVLKQFNYDEVIRPETTVEA
                     LATLRPAFDPVNGTVTAGTSSALSDGAAAMLVMSESRAHELGLKPRARVRSMAVVGCN
                     PSIMGYGPVPASKLALKKAGLSASDIGVFEMNEAFAAQILPCIKDLGLMEQIDEKINL
                     NGGAIALGHPLGCSGARISTTLLNLMERKDVQFGLATMCIGLGQGIATVFERV"
     gene            complement(7781..8482)
                     /gene="fre"
                     /locus_tag="JN001_002011"
     CDS             complement(7781..8482)
                     /gene="fre"
                     /locus_tag="JN001_002011"
                     /EC_number="1.5.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-flavin reductase"
                     /protein_id="HAY9053252.1"
                     /translation="MTTLSCKVTSVEAITDTVYRVRIVPDAAFSFRAGQYLMVVMDER
                     DKRPFSMASTPDEKGFIELHIGASEINLYAKAVMDRILKDYQIVVDIPYGEAWLRDDE
                     ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGREEQHLYDLSELEALSLKHP
                     GLRVVPVVEQPEAGWRGRTGTVLTAVLQDHGTLAEHDIYIAGRFEMAKIARDLFCSER
                     NAREDRLFGDAFAFI"
     gene            complement(8528..10021)
                     /gene="ubiD"
                     /locus_tag="JN001_002012"
     CDS             complement(8528..10021)
                     /gene="ubiD"
                     /locus_tag="JN001_002012"
                     /EC_number="4.1.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-polyprenylbenzoate decarboxylase"
                     /protein_id="HAY9053253.1"
                     /translation="MDAMKYNDLRDFLTLLEQQGELKRITLPVDPHLEITEIADRTLR
                     AGGPALLFENPKGYSMPVLCNLFGTPKRVAMGMGQEDVSALREVGKLLAFLKEPEPPK
                     GFRDLFDKLPQFKQVLNMPTKRLRGVPCQQKIVSGDDVDLNRIPIMTCWPEDAAPLIT
                     WGLTVTRGPHKERQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEWCAAHPGERFPVS
                     VALGADPATILGAVTPVPDTLSEYAFAGLLRGTKTEVVKCISNDLEVPASAEIVLEGY
                     IEQGETAPEGPYGDHTGYYNEVDSFPVFTVTHITQREDAIYHSTYTGRPPDEPAVLGV
                     ALNEVFVPILQKQFPEIVDFYLPPEGCSYRLAVVTIKKQYAGHAKRVMMGVWSFLRQF
                     MYTKFVIVCDDDVNARDWNDVIWAITTRMDPARDTVLVENTPIDYLDFASPVSGLGSK
                     MGLDATNKWPGETQREWGRPIKKDPDVVAHIDAIWDELAIFNNGKSA"
     gene            10188..10676
                     /gene="rfaH"
                     /locus_tag="JN001_002013"
     CDS             10188..10676
                     /gene="rfaH"
                     /locus_tag="JN001_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription/translation regulatory transformer
                     protein RfaH"
                     /protein_id="HAY9053254.1"
                     /translation="MQSWYLLYCKRGQLQRAQEHLERQAVNCLALMITLEKIVRGKRT
                     AVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPK
                     DIVDPATPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFR
                     KL"
     gene            complement(10673..11455)
                     /gene="tatD"
                     /locus_tag="JN001_002014"
     CDS             complement(10673..11455)
                     /gene="tatD"
                     /locus_tag="JN001_002014"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' ssDNA/RNA exonuclease TatD"
                     /protein_id="HAY9053255.1"
                     /translation="MFDIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQ
                     AQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAVQPEVVAIGECGLDFNRNFST
                     PEEQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREE
                     MQACVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDFTPKPSS
                     RRNEPAHLHHILQRIAHWRGEDAAWLAATTDANVKTLFGIAF"
     gene            complement(11497..12273)
                     /gene="tatC"
                     /locus_tag="JN001_002015"
     CDS             complement(11497..12273)
                     /gene="tatC"
                     /locus_tag="JN001_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatC"
                     /protein_id="HAY9053256.1"
                     /translation="MSVEDTQPLITHLIELRKRLLNCIIAVIVIFLCLVYFANDIYHL
                     VSAPLIKQLPQGSTMIATDVASPFFTPIKLTFMVSLILSAPVILYQVWAFIAPALYKH
                     ERRLVVPLLVSSSLLFYIGMAFAYFVVFPLAFGFLANTAPEGVQVSTDIASYLSFVMA
                     LFMAFGVSFEVPVAIVLLCWMGITSPEDLRKKRPYVLVGAFVVGMLLTPPDVFSQTLL
                     AIPMYCLFEIGVFFSRFYVGKGRNREEENDAEAESEKTEE"
     gene            complement(12276..12791)
                     /gene="tatB"
                     /locus_tag="JN001_002016"
     CDS             complement(12276..12791)
                     /gene="tatB"
                     /locus_tag="JN001_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatB"
                     /protein_id="HAY9053257.1"
                     /translation="MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLAT
                     TVQNELIQELKLQEFQDSLKKVEKASLTNLTPELKASMDELRQAAESMKRSYVANDPE
                     KASDEAHTIHNPVVKDNEAAHEGVTPAAAQTQASSPEQKPETTPEPVVKPAADAEPKT
                     AAPSPSSSDKP"
     gene            complement(12795..13064)
                     /gene="tatA"
                     /locus_tag="JN001_002017"
     CDS             complement(12795..13064)
                     /gene="tatA"
                     /locus_tag="JN001_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sec-independent protein translocase subunit
                     TatA"
                     /protein_id="HAY9053258.1"
                     /translation="MGGISIWQLLIIAVIVVLLFGTKKLGSIGSDLGASIKGFKKAMS
                     DDEPKQDKTSQDADFTAKTIADKQADTNQEQAKTEDAKRHDKEQV"
     gene            complement(13143..14783)
                     /gene="ubiB"
                     /locus_tag="JN001_002018"
     CDS             complement(13143..14783)
                     /gene="ubiB"
                     /locus_tag="JN001_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis regulatory protein
                     kinase UbiB"
                     /protein_id="HAY9053259.1"
                     /translation="MTPGEVRRLYFIIRTFLSYGLDELIPKMRITLPLRLWRYSLFWM
                     PNRHKDKLLGERLRLALQELGPVWIKFGQMLSTRRDLFPPHIADQLALLQDKVAPFDG
                     KLAKQQIEAAMGGLPVEAWFDDFEIKPLASASIAQVHTARLKSNGKEVVIKVIRPDIL
                     PVIKADLKLIYRLARWVPRLLPDGRRLRPTEVVREYEKTLIDELNLLRESANAIQLRR
                     NFEDSPMLYIPEVYPDYCSEGMMVMERIYGIPVSDVAALEKNGTNMKLLAERGVQVFF
                     TQVFRDSFFHADMHPGNIFVSYEHPENPKYIGIDCGIVGSLNKEDKRYLAENFIAFFN
                     RDYRKVAELHVDSGWVPPDTNVEEFEFAIRTVCEPIFEKPLAEISFGHVLLNLFNTAR
                     RFNMEVQPQLVLLQKTLLYVEGVGRQLYPQLDLWKTAKPFLESWIKDQVGIPALVRAF
                     KEKAPFWVEKMPELPELVYDSLRQGKYLQHSVDKIARELQSNHVRQGQSRYFLGIGAT
                     LVLSGTFLLVSRPEWGLMPGWLMAGGLIAWFVGWRKTR"
     gene            complement(14780..15385)
                     /gene="ubiJ"
                     /locus_tag="JN001_002019"
     CDS             complement(14780..15385)
                     /gene="ubiJ"
                     /locus_tag="JN001_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinone biosynthesis protein UbiJ"
                     /protein_id="HAY9053260.1"
                     /translation="MPFKPLVTAGIESLLNTFLYRSPALKTARSRLLGKVLRVEVKGF
                     STSLILVFSERQVDVLGEWAGDADCTVIAYASVLPKLRDRQQLTALIRSGELEVQGDI
                     QVVQNFVALADLAEFDPAELLAPYTGDIAAEGISKAMRGGAKFLHHGIKRQQRYVAEA
                     ITEEWRMAPGPLEVAWFAEETAAVERAVDALTKRLEKLEAK"
     gene            complement(15399..16154)
                     /gene="ubiE"
                     /locus_tag="JN001_002020"
     CDS             complement(15399..16154)
                     /gene="ubiE"
                     /locus_tag="JN001_002020"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HAY9053261.1"
                     /translation="MVDKSQETTHFGFQTVAKEQKADMVAHVFHSVASKYDVMNDLMS
                     FGIHRLWKRFTIDCSGVRRGQTVLDLAGGTGDLTAKFSRLVGETGKVVLADINESMLK
                     MGREKLRNIGVIGNVEYVQANAEALPFPDNTFDCITISFGLRNVTDKDKALRSMYRVL
                     KPGGRLLVLEFSKPIIEPLSKAYDAYSFHVLPRIGSLVANDADSYRYLAESIRMHPDQ
                     DTLKAMMQDAGFESVDYYNLTAGVVALHRGYKF"
     gene            complement(16249..17676)
                     /gene="rmuC"
                     /locus_tag="JN001_002021"
     CDS             complement(16249..17676)
                     /gene="rmuC"
                     /locus_tag="JN001_002021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HAY9053262.1"
                     /translation="MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAE
                     LSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIR
                     QMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSF
                     GKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASG
                     LREGYEYETQVSIENDAHSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTR
                     ESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITE
                     ALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAI
                     GQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEY
                     RLRSVPEQPNDEAYQRDDEYNQQSR"
     gene            complement(17817..18578)
                     /gene="udp"
                     /locus_tag="JN001_002022"
     CDS             complement(17817..18578)
                     /gene="udp"
                     /locus_tag="JN001_002022"
                     /EC_number="2.4.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine phosphorylase"
                     /protein_id="HAY9053263.1"
                     /translation="MSKSDVFHLGLTKNDLQGATLAIVPGDPDRVEKIAALMDKPVKL
                     ASHREFTTWRAELDGKPVIVCSTGIGGPSTSIAVEELAQLGIRTFLRIGTTGAIQPHI
                     NVGDVLVTTASVRLDGASLHFAPLEFPAVADFECTTALVEAAKSIGATTHVGVTASSD
                     TFYPGQERYDTYSGRVVRHFKGSMEEWQAMGVMNYEMESATLLTMCASQGLRAGMVAG
                     VIVNRTQQEIPNAETMKQTESQAVKIVVEAARRLL"
     gene            18840..19652
                     /locus_tag="JN001_002023"
     CDS             18840..19652
                     /locus_tag="JN001_002023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY9053264.1"
                     /translation="MATTQQSGFAPAASPLASTIVQTPDDAIVAGFTSIPSQGDNMPA
                     YHARPKQSDGPLPVVIVVQEIFGMHEHIRDICRRLALEGYLAIAPELYFREGDPNDFA
                     DIPTLLSGLVAKVPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHN
                     PQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAPVLGLYGGQDNSIPQESVETMRQA
                     LRAANAKAEIIVYPDAGHAFNADYRPSYHAESAKDGWQRMLEWFKQYGGKRS"
     gene            20046..20314
                     /gene="hcp"
                     /locus_tag="JN001_002024"
                     /pseudo
     CDS             20046..20314
                     /gene="hcp"
                     /locus_tag="JN001_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001278763.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
     gene            20468..20788
                     /locus_tag="JN001_002025"
                     /pseudo
     CDS             20468..20788
                     /locus_tag="JN001_002025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001356833.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
BASE COUNT         5081 a         5612 c         5214 g         4881 t
ORIGIN      
        1 tttttattct ttatgcttat ttcagcgtcg gtttgttggt taactgggcg atttctcggg
       61 cgaaattcgc cacctgctcc caatcggtat agacaacttc tttgcgcgta tccgtttcac
      121 cgcctgacat cttcataatc agcttaatca taaaacggtc gtaccagcga taacgtgggt
      181 aacgcagcgc cccggcaatg accgcgcagc gatcgggacg ccattgtgaa ctcatcagaa
      241 acttgcgcgc gtagctgttg gtctgtggag tacgcttctc cggtttgcgc gccaccaggt
      301 ttacggaata aaaggcgctc ggcatcgaat tcagtcgcgt cgcatgtttt ttgacaaatt
      361 cctggaacgc agagtggtag tgaccatagc gaatagaagc accaatgacc acacggtcat
      421 agttttccca ttgtggttct tcaatgcggt gcacattggc gacatccgtc tggatcccca
      481 gttctttcag ttccgaagcc aggtaggagg caatctcgcg cgtttgtccg tcccttgttg
      541 agaaaagaat taatgttttc acgtattact ccatcattca cgccagaaag tcggggtaaa
      601 gagcaccagc aatgtaaaga cctcgagacg accaaacagc atgttggcaa tcaggatcca
      661 tttagccacc gggttcatac tggtaaagtt atcagcaacc acgccaagcc ctggccccag
      721 gttattcaat gtcgcaacaa ctgaggcaaa ggcagaaaaa tcatccacgc ccgtggcgat
      781 aatcgccagc atactgacaa taaacaccaa tgcataggcg gagaaaaatc cccaaacggc
      841 ttcgaggata cgttccggca gtgcgcgatt ccccagctta atgctataga cggcgttcgg
      901 atgcaccagt cgtttcagct cacggttccc ctgcttaaac agcagcagga tgcggatcac
      961 tttcaggcca ccgcccgttg acccggcgca accgccgata aaagctgaac ataaaagcag
     1021 taccggcaaa aagagcggcc agcgggcaat gctgtcagtc gtaaacccgg cggttgtcgc
     1081 catcgatacc acctggaaaa acgcctggtt aattgtcatc agcgccgaac tgtagacatt
     1141 atgaaaccac agtacgagtg tacaaataac caccagcgta aactgtacgc cgataaacat
     1201 gcgaaattcc ggatcgcgcc aataaacctt cagactacgc ccacttaaca gtgaaaagtg
     1261 cagaccgtag ttacaaccgg agatcagcag gaagatagca atgatagtgt taatagtcgg
     1321 actgtcgaaa taaccgatac tggcatcatg tgtcgagaag ccgccaatag cgatagtcgc
     1381 aaagctatgg ccgatggcat caaaggcatc cattccggca aaccacaacg ccagcgcaca
     1441 ggcgacggtc agcaagacat aaatcaacca cagggttttc gccgtttccg caattcgcgg
     1501 gcgcattttg ttatctttca gcgggccggg catttctgcg cgatagagct gcatcccacc
     1561 cacgccgagg ataggcagta tcgcaaccgc taacacgatg atccccatcc cgccaaacca
     1621 ttgcagcatc tggcgataaa agaggatggc atgagggagc gaatccagcc ccaccagcgt
     1681 agtggccccg gtggtggtca ggccagagaa agattcaaaa aacgcatcgg taatcgtgag
     1741 gttcgggctt tccgagaaga taaaagggag cgcaccgaca ctacccagca cggtccaaaa
     1801 cagcaccact atcagaaacc cctcacggga tttcagttcg cccttctctt tgcggttcgg
     1861 ccaccacagc atagagccaa tggcgagggc gacaaaaaag gtctgggtaa aagcgcggcc
     1921 cgctccatcc cggtagatga gtgctaccag cccagggata atcatggtcc ctgaaaataa
     1981 gatgaccagt agtccaacga ttcgggtaat ggcgcgaaaa tgcatctctg ccgcttcctt
     2041 agttctgcaa aatgaagtgg ggattattct tcaatcgcta acaattgcaa tgaaccacgg
     2101 ctaaaatccg ccagctttgc ggaaaattca gccactttcg ccgccggaag cgccacccgc
     2161 agcagaacga atgcctgata atcactgttg ataattttgc cgtcacactg ccccagcaac
     2221 gcttcaatgc cggttaactg actatattca cattgcaaag tatattcggt taatggcgtc
     2281 ttgcgttggg tcgttagctg gcgcagcgcc tgattcacgc cgccgccata cgctttcact
     2341 aacccaccgg tgccaagcaa tatgccgccg tagtagcgca ctaccacagc ggtaatttcc
     2401 ccgatgccgc tgcccattag ctgggcgagc atcggtttac ctgccgttcc cgccggctcc
     2461 ccgtcgtcag agaaacccag ctgttgagaa tcatccggcg cacccgccac ccacgccacg
     2521 caatggtggc gggcatcggg gtgttctgcc cgcaccgatt caacaaacgc tttcgccgcc
     2581 tcaacgccat cggtatgcgc caacatcgtt atgaagcggc tctttttgat ctcttcaacg
     2641 accgtgaccg gtgccgcagg aattaaccag ctttccatca cgccagtttc agatcccggg
     2701 tcatgttttc cacgttattt tcgtggatca ccacgttgtc ttcgatacga atgccgctga
     2761 acggtttcag tgcttcaatt ttctgccagt tgaagtgctt gctgaactgc ccttcacgcc
     2821 acggtgccag tagcgattcg atgaagtaga tacccggttc gatggttaac accatgcccg
     2881 gctggagaat acgggtgcag cgcaggtacg gatattttgc cggtgccgcg aggtgtgtac
     2941 cgctatcatc ctgcataaaa ccggctacgt catgcacctg caggcccagc ggatggccga
     3001 taccgtgcgg cataaacggt ccggtgagat cgttttcgac catcgcttct tcactcatat
     3061 cggtgatgat ttgatgttta cgcagcaatt tggcgatgcg ctgatggaac tggaggtggt
     3121 aatccacata gctgacgcca gctttcatgg tagcgatcag cgcaagttgt tcatcattta
     3181 cgtctttcac cagctgtgcg tagtcgttgt cgctttttgc cgaccaggta cgagtcaggt
     3241 cagccgcata gccgttatat tcggccccgg catccagcag gaagctgcgc atctcttccg
     3301 gtgcctgatg atccagtttg gtgtaatgca gcaccgaagc gtgttcgtta agcgccacaa
     3361 tgttgctgta aggtacgtcg gtatcacgat gaccggtcgc ggtcagatag gcgatgttga
     3421 tatcgaactc gctcatgcca gaacggaacg cttcttctgc cgcacgatga ccgttgaccg
     3481 ccattttctg cgcttcacgc atacaggcca gttcgtactc ggttttgaag gagcggtagt
     3541 aatgcaggta gtcgatcacc cctttcgggt tgatgttgct ggcctcaata cccagttgca
     3601 gcgcacgttc cggcaccgga ccgatataac cgatattgcc gcgcgcagcg ggcagcaggc
     3661 taccaatgcc atcggctttc ggcagtgcga tcacttccac atcttcagtc cagaaggagg
     3721 tcggcagcgg ttcgacgttg tgccagtaat caaccggcag atagaaccac agtttcggct
     3781 tgttcacgcc atccaccagc aaccagcagt ttggcacctg agttaccggc acccacgctt
     3841 tgaattgcgg gttcacttta aacggatagg gatgatcgtc gagaaaaacg ttgaacagct
     3901 cgccggagtg aataagtaat gcatccagct tgaagcgcgc cagcgcatcg cgagtccgtt
     3961 cttgtaaggt agctatatga tttttataga gcgaggccag tgattccatt ttttaccctt
     4021 ctgttttttt gaccttaagt ctccgcatct tagcacatcg ttcatccaga gcgtgatttc
     4081 tgccgagcgt gatcagatcg gcatttcttt aatcttttat ttacatgttt ttaacacaaa
     4141 atacacactt cgatgcatct ggtacgacca gatcaccttg cggattcagg agactgacat
     4201 gctttacaaa ggcgacaccc tgtaccttga ctggctggaa gatggcattg ccgaactggt
     4261 atttgatgcc ccaggttcag ttaataaact cgacactgcg accgtcgcca gcctcggcga
     4321 ggccatcggc gtgctggaac agcaatcaga tctaaaaggg ctgctgctgc gttcgaacaa
     4381 agcagccttt atcgtcggtg ctgatatcac cgaatttttg tccctgttcc tcgttcctcg
     4441 ttcctcgttc ctcgttcctc gttcctgaag aacagttaag tcagtggctg cactttgcca
     4501 atagcgtgtt taatcgcctg gaagatctgc cggtgccgac cattgctgcc gtcaacggct
     4561 atgcgctggg tggtggctgc gaatgcgtgc tggcgaccga ttatcgtctg gcgacgccgg
     4621 atctgcgcat cggtctgccg gaaaccaaac tgggcatcat gccgggcttt ggcggttctg
     4681 tacgtatgcc acgtatgctg ggcgctgaca gtgcgctgga aatcattgcc gccggtaaag
     4741 atgtcggcgc ggatcaggcg ctgaaaatcg gtctggtgga tggcgtagtc aaagcagaaa
     4801 aactggttga aggcgcaaag gcggttttac gccaggccat taacggcgac ctcgactgga
     4861 aagcaaaacg tcagccgaag ctggaaccac taaaactgag caagattgaa gccaccatga
     4921 gcttcactat cgctaaaggg atggtcgcac aaacggcggg gaaacattat ccggcgccca
     4981 tcaccgcagt aaaaaccatt gaagctgcgg cccgttttgg tcgtgaagaa gcattaaatc
     5041 tggaaaacaa aagctttgtc ccgctggcgc acaccaacga agcccgcgca ctggtcggca
     5101 ttttccttaa cgatcaatat gtaaaaggca aagcgaagaa actcaccaaa gacgttgaaa
     5161 caccgaaaca ggccgctgta ctgggcgcag gcatcatggg tggcggcatt gcttaccagt
     5221 ctgcgtggaa aggcgtaccg gttgtcatga aagatatcaa cgacaagtcg ttaaccctcg
     5281 gcatgaccga agccgcgaaa ctgctgaaca agcagcttga acgcggcaag atcgatggtc
     5341 tgaaactggc tggcgtgatc tccacgatcc acccaacgct cgactacgcc gggtttgacc
     5401 gcgtggatgt tgtggtagaa gcggttgtcg aaaacccgaa agtgaaaaaa gccgtactgg
     5461 cagaaaccga acaaaaagta cgcccggata ccgtactggc gtctaacact tcaaccattc
     5521 ctatcagcga actggccaac gcgctggaac gcccggaaaa cttctgcgga atgcactttt
     5581 ttaacccggt acaccggatg ccgttggtag aaattattcg cggcgagaaa agctccgacg
     5641 aaaccatcgc gaaagttgtc gcctgggcga gcaagatggg caagacgccg attgtggtta
     5701 acgactgccc cggcttcttt gttaaccgcg tgctgttccc gtatttcgcc ggtttcagcc
     5761 agctgctgcg cgacggcgcg gatttccgca agatcgacaa agtgatggaa aaacagtttg
     5821 gctggcctat gggtccggca tatctgctgg atgtcgtggg cattgatacc gcgcatcacg
     5881 ctcaggctgt catggcagca ggcttcccgc agcggatgca gaaagattac cgcgatgcca
     5941 tcgacgcgct gtttgatgcc aaccgctttg gtcagaagaa cggcctcggt ttctggcgtt
     6001 ataaagaaga cagcaaaggt aagccgaaga aagaagaaga cgccgccgtt gaagacctgc
     6061 tggcagaagt gagccagccg aagcgcgatt tcagcgaaga agagattatc gcccgcatga
     6121 tgatcccgat ggtcaacgaa gtggtccgct gtctggaaga gggcattatc gccactccgg
     6181 cggaagcgga tatggcgctg gtctacggcc tgggcttccc tccgttccac ggcggcgcgt
     6241 tccgctggct gaacaccctc ggtagcgcaa aatacctcga tatggcacag caatatcagc
     6301 acctcggccc gctgtatgaa gtgccggaag gtctgcgtaa taaagcgcgt cataacgaac
     6361 cgtactatcc tccggttgag ccagcccgtc cggttggcga cctgaaaacg gcttaaggag
     6421 tcacaatgga acaggttgtc attgtcgatg caattcgcac cccgatgggc cgttcgaagg
     6481 gcggtgcttt tcgtaacgtg cgtgcagaag atctctccgc tcatttaatg cgtagcctgc
     6541 tggcgcgtaa cccggcgctg gaagcggcgg ccctcgacga tatttactgg ggttgtgtgc
     6601 agcagacgct ggagcagggt tttaatatcg cccgtaacgc ggcgctgctg gcagaagtgc
     6661 cgcactctgt cccggcggtt accgtcaatc gcttgtgtgg ttcatccatg caggcactgc
     6721 atgacgcagc acgaatgatc atgactggcg atgcgcaggc atgtctggtt ggcggcgtgg
     6781 agcatatggg ccatgtgcca atgagtcacg gcgtcgattt tcaccccggc ctgagccgca
     6841 atgtcgccaa agcggcgggc atgatgggct taacggcaga aatgctggcg cgtatgcacg
     6901 gtatcagccg tgaaatgcag gatgcctttg ccgcgcggtc acacgcccgc gcctgggccg
     6961 ccacgcagtc gggcgcattt aaaaatgaaa tcatcccgac cggtggtcac gatgccgacg
     7021 gcgtcctgaa gcagtttaat tacgacgagg tgattcgacc ggaaaccacc gtggaagccc
     7081 tcgccacgct gcgtccggcg tttgatccag taaacggtac ggtaacggcg ggcacatctt
     7141 ctgcactttc cgatggcgca gctgccatgc tggtgatgag tgaaagccgc gcccatgaat
     7201 taggtcttaa gccgcgcgct cgtgtgcgtt cgatggcggt cgttggttgt aacccatcga
     7261 ttatgggtta cggcccggtt ccggcctcga agctggcgct gaaaaaagcg gggctttctg
     7321 ccagcgatat cggcgtgttt gagatgaacg aagcctttgc cgcgcagatc ctgccgtgca
     7381 ttaaagatct cgggctaatg gagcagattg acgagaagat caacctcaat ggtggtgcga
     7441 tcgcgctggg tcatccgctg ggctgttccg gtgcgcgtat cagcaccacg ctgctgaatc
     7501 tgatggaacg caaagacgtt cagtttggtc tggcgacgat gtgtatcggt ctgggtcagg
     7561 gtattgcgac ggtgtttgag cgggtttaac cacttgccgg atgcggcgtg aacgccttat
     7621 ccggtctacc gatcctgcac caatgtaggc ctgataagac gcgccagcgt cgcatcaggc
     7681 atcgtgcacc gattgccgga tgcgacatag atctaaatgc cactgaataa agttttagtt
     7741 gccgttcttc ccgcctgtca ggggcgggtt tttttatatc tcagataaat gcaaacgcat
     7801 cgccaaacag acgatcttcc cgcgcattac gctcactgca aaacaggtca cgagcaattt
     7861 tcgccatctc aaaacgtccg gcaatataga tatcatgctc tgccagcgta ccatgatcct
     7921 gcaagaccgc cgttaacacg gtgccagtac gcccacgcca gcccgcttcc ggttgttcaa
     7981 ccaccggcac cacacgcagg ccaggatgct tcagcgaaag cgcctcaagc tcggagagat
     8041 cataaagatg ttgctcctca cgcccacccc agtaaatggt gatatcgcga ttgggattac
     8101 gcgccaacgc cgtcaataaa atcgagcgcg cataggagaa cccggtgccg cccgcaatca
     8161 aaatcatcgg acgctcttca tcatcgcgca gccacgcttc tccgtaggga atatcgacca
     8221 cgatttgata atctttgagg atgcggtcca tgactgcttt cgcgtaaagg ttgatttcag
     8281 aagcgccaat atgcagctct ataaaccctt tttcatccgg cgtcgaagcc attgaaaacg
     8341 gacgtttgtc gcgctcatcc atcactacca tcaaatactg accagcacga aaagaaaagg
     8401 ccgcgtctgg cacgatgcgg acacgatata cggtatccgt gatagcttct accgaggtca
     8461 ctttacagct taaggttgtc atgcgctttc tctgtcggat cgataaatag ggcaaaacaa
     8521 acgcgcatca ggcgctttta ccgttgttaa aaatagccag ttcatcccag atggcgtcaa
     8581 tatgcgcgac aacatctgga tcttttttga tgggacgtcc ccattcacgc tgggtttccc
     8641 ccggccattt attcgtggca tccagcccca tttttgaacc cagcccggag acaggcgagg
     8701 caaaatccag ataatcaata ggcgtatttt ctaccagaac agtatcccgc gccgggtcca
     8761 tacgggtggt aatcgcccaa atcacatcgt tccagtcgcg tgcgttgacg tcatcatcgc
     8821 aaacgatcac aaatttagtg tacataaact ggcgtaagaa cgaccagacg cccatcatga
     8881 cgcgcttcgc gtgtccggcg tactgttttt tgatcgtcac taccgccaga cgataagaac
     8941 agccttccgg cggcaggtaa aaatcgacaa tttccgggaa ctgtttttgc agaatcggta
     9001 caaacacttc gttcaacgcc acgcccagta ccgcgggctc atctggcgga cgcccggtat
     9061 aggtggaatg gtaaatcgca tcttcacgct gggtaatatg cgtcacggta aataccggga
     9121 aactatcgac ttcgttatag taaccggtgt ggtcgccata cggcccttcc ggcgcagttt
     9181 cgccttgttc gatataccct tccagcacaa tctccgcact ggcgggcact tcaaggtcat
     9241 tggagataca cttcaccact tcggtcttgg taccgcgcag caatccggca aacgcatact
     9301 ctgaaagtgt atccggaacg ggggtgactg caccgagaat cgtggcggga tcggcaccca
     9361 gcgccacaga aaccgggaaa cgttcgcccg gatgcgccgc acaccactcc tgataatcca
     9421 gcgcgccgcc gcgatgcgac agccagcgca taatcagttt gtttttacca atcagctgct
     9481 ggcgataaat gcccagattc tgccgctctt tatgcgggcc gcgcgtcact gtcagccccc
     9541 aggtaatcag cggtgcggca tcttccggcc agcaggtcat aatgggaatg cgattgagat
     9601 cgacgtcatc gccagagacg attttttgtt ggcagggcac accacgcagc cgctttgtcg
     9661 gcatgttcaa tacttgctta aactgcggca gtttatcaaa caggtcgcgg aaaccttttg
     9721 gcggctccgg ctctttcaga aacgccaata atttaccaac ttcacgcagc gccgaaacat
     9781 cttcctgtcc catgcccatc gccacgcgct ttggcgtacc gaacaggttg cacagcaccg
     9841 gcattgagta gcctttaggg ttttcgaaca acagcgcagg cccaccggca cgcaaagtgc
     9901 ggtcagcaat ttcagtgatt tccagatgcg gatccaccgg gagcgtgata cgttttagct
     9961 caccctgctg ttcaagcagc gtcaagaagt cgcgtaaatc gttatatttc atggcgtcca
    10021 ttgtagcctc ttaatctacg cccattatac ggcgttcatc tttgcgatgc tgtaaatttg
    10081 ttaaattagc gtgaactctg acggtataac gcaaaccggg gaatataatt aacttagcgt
    10141 aaagcttttg ctatccttgc gccccgatta aacggataag agtcattatg caatcctggt
    10201 atttactgta ctgcaagcgc gggcaacttc aacgtgccca ggaacacctc gaaagacagg
    10261 ctgtgaattg cctggcactg atgatcaccc tggaaaaaat cgtgcgtgga aaacgtactg
    10321 cagtcagtga gccattgttt cccaactacc tgtttgtcga atttgatcca gaagtgattc
    10381 ataccacgac tatcaacgcg acccgcggtg tcagccactt cgtgcgcttt ggcgcgtcgc
    10441 cagcgatagt cccatcggcg gtgattcatc agctatcggt atataaaccg aaagacattg
    10501 tcgatccggc aacaccttat ccgggtgata aggtgattat taccgaaggc gcgttcgaag
    10561 gctttcaggc cattttcacc gaacccgatg gtgaggctcg ttccatgcta ttgcttaatc
    10621 ttattaataa agagattaag cacagtgtga agaacaccga gttccgcaaa ctctaaaacg
    10681 caatcccaaa cagtgttttg acattggcat ccgtggtggc agccagccat gcggcatctt
    10741 ctccacgcca gtgcgcaata cgttgcaaaa tatggtgcag atgggctggc tcgttgcgcc
    10801 gggatgatgg ctttggcgtg aaatcgcgcg ggagcagata cggcgcatca gtttcgatca
    10861 gcaatttctc cgccggaatc aacggtaaca attcccgcag ctccagcccg cgtcgttcat
    10921 cgcaaaccca accggtaatg ccgatataaa ttccacgcgc cacgcacgcc tgcatctctt
    10981 cgcgtgtgcc ggtaaagcaa tgaagaaccg caccaggcag tttatccagc cacggctcca
    11041 gcaatgtcat aaaccgctcg tgggcatcgc gacagtgcat aaataccggc atgtttaatt
    11101 ctgcggcaat gcgtagctga gcaacaaaag cgcgttcctg ctcttccggc gtcgaaaagt
    11161 tgcggttaaa gtcgagacca cattcaccaa tcgccaccac ttctggctgc acggccagct
    11221 caataatcgc ttcttcagtc gcagcttgcc actggctgct gtcgtgagga tgtacgcccg
    11281 ccgttgacca acaggacgaa tactgacgcg ccagcttttg cgcctgctgg ctttcacgca
    11341 ggttagtgcc ggtgatgagt agcccattaa ctcccgcgtc aaaagcgcgc gctacaacat
    11401 catcacggtc tttcgcaaat tgcgaactgg tcaaattaac gccgatatca aacatcctgt
    11461 actccatatg acaaccgccc tgacgggcgg ttgaatttat tcttcagttt tttcgctttc
    11521 tgcttcagcg tcgttttcct cttcccgatt tcgcccttta ccaacgtaaa agcgtgagaa
    11581 gaagacaccg atttcaaaca gacagtacat cgggatcgcc aatagcgttt gcgagaagac
    11641 atccggcggc gtcagcaaca tcccgacaac gaatgcacca accagcacat acgggcgttt
    11701 tttgcgtaag tcttctggcg aggtaatccc catccagcac agcagcacaa ttgccaccgg
    11761 cacttcaaag gagacaccaa acgccataaa cagcgccata acgaagctta aatagctggc
    11821 gatgtcggtg gatacctgca ccccttccgg cgcggtattg gcaaggaagc caaatgccag
    11881 cggaaagacc acaaagtagg cgaatgccat gccgatataa aacagcagag agctggaaac
    11941 cagcagcggc accaccaggc gacgttcatg cttatacagc gctggggcga taaatgccca
    12001 cacctgatag agaatcaccg gcgctgacag aatcagcgac accataaagg tcagcttgat
    12061 cggcgtaaag aacggcgagg ccacgtcggt ggcgatcatc gttgaacctt gcggcaactg
    12121 cttgatcaat ggcgcggata ccaggtgata gatgtcattg gcgaaataga ccagacacag
    12181 gaatatcacg atcaccgcga taatgcagtt cagcagacgc ttacgcagct caattagatg
    12241 cgtgataagc ggttgagtat cttctacaga catgtttacg gtttatcact cgacgaaggg
    12301 gaaggtgcag cggttttcgg ttcagcgtcc gcagcaggtt ttaccaccgg ctctggcgtg
    12361 gtttctggct tctgttccgg cgaactggcc tgcgtttgtg cagcggcagg cgttacgccc
    12421 tcatgcgcag cttcattatc tttcaccacc gggttatgga tggtgtgcgc ttcatcgctc
    12481 gccttttctg gatcgtttgc aacgtaggaa cgcttcatcg actccgcggc ctggcgtagt
    12541 tcatccatcg acgctttcag ttcgggcgtc aggttagtga ggctcgcctt ttcaaccttt
    12601 ttcagactgt cctgaaactc ctggagtttt aactcctgga tcagttcgtt ctgcaccgtt
    12661 gtcgccagtg aacgcaacgc gcgaatccag cccgctaccg tttttaccgc cacaggcagt
    12721 cgttgcggcc ccagaacgac gaggccgatg atgaacacca atagcagttc gctaaaaccg
    12781 atatcaaaca cggattacac ctgctcttta tcgtggcgct tcgcgtcttc tgttttagcc
    12841 tgttcctgat tcgtatccgc ctgcttatcg gcgatagttt tcgcagtaaa atcagcatcc
    12901 tgactggttt tatcctgctt tggttcatca tcgctcattg cttttttaaa gcctttgatc
    12961 gacgcaccaa gatcggaacc gatggagccg agctttttgg tgccaaaaag cagtacaacg
    13021 atgacggcaa taatcaataa ctgccaaata ctgataccac ccatacatgt tcctctgtgg
    13081 tagatgatga ttaaacaaag ccgcattata cgttacacgg cccgccttga gcgatgaaaa
    13141 aatcagcgtg ttttgcgcca accgacaaac caggcgatca gaccacctgc cattaaccag
    13201 ccgggcatca gcccccactc aggtcggctg accaacaaga atgtgccact taatactaac
    13261 gtagcgccaa ttccgagaaa ataacgcgat tgtccctgac gtacatgatt tgactgaagc
    13321 tcgcgggcaa tcttatcaac actgtgctgt aaatacttgc cctggcgcaa actgtcgtaa
    13381 accaattcag gcagttctgg cattttttcg acccagaacg gcgctttttc tttaaatgct
    13441 ctcaccagcg caggaatacc gacctgatct ttaatccacg actccaggaa aggcttcgct
    13501 gttttccata aatcgagctg cggataaagc tggcgtccta ccccttcgac atagagcagg
    13561 gttttctgga gtaacaccag ttgcggctgc acttccatat tgaagcgacg cgccgtatta
    13621 aacagattta acagtacatg tccaaacgaa atttcggcca gcggtttctc aaagataggt
    13681 tcacagaccg tacgaatggc aaattcgaac tcttcaacgt tggtatctgg tggcacccag
    13741 cctgaatcga cgtgtagctc tgccactttg cgatagtcgc gattaaagaa ggcgataaag
    13801 ttttctgcca gatagcgttt atcttctttg tttagcgagc caacaatccc gcaatcaatg
    13861 ccgatatatt tcgggttttc cgggtgttca tagcttacga agatgttgcc agggtgcata
    13921 tcggcatgga aaaagctgtc gcgaaagacc tgagtgaaga acacctgcac gccgcgttcc
    13981 gccagcaatt tcatgttagt gccgtttttc tccagcgccg caacatcaga caccggaatg
    14041 ccgtaaatgc gctccatcac catcatccct tcactacaat agtcagggta aacttccggg
    14101 atgtagagca tcgggctgtc ttcaaaattg cgccgaagct gaatggcgtt ggcagattcc
    14161 cgcagcaaat tcagttcatc aatcaaggtc ttttcgtact cgcgcaccac ttcggttggg
    14221 cgcagacggc gaccatccgg cagcaaacgc ggcacccagc gagccagacg gtagataagt
    14281 ttcagatccg ctttaatgac cggcaaaata tccgggcgga tgactttaat caccacctct
    14341 ttaccattcg atttcaatcg cgcggtatga acctgggcga tagaagcaga agccagcggc
    14401 ttgatttcaa aatcgtcaaa ccacgcttct accggcaagc cgcccattgc agcttcaatc
    14461 tgctgcttcg ccagcttgcc atcaaacgga gctactttgt cctgcaataa cgccagctga
    14521 tcggcaatat gcggtggaaa aagatcgcgg cgggttgata acatttgccc gaacttgatc
    14581 caaaccggcc ccagttcttg cagggccagt cgtagtcgct cacctaaaag tttgtcttta
    14641 tgccgatttg gcatccagaa taatgagtat cgccatagcc gtagcggcag ggtgatacgc
    14701 attttgggga tcagttcatc aagtccgtag cttaaaaaag tgcgaatgat gaaatatagg
    14761 cgccgtactt cacctggcgt catttagcct ccagtttttc cagccgtttg gtcagggcat
    14821 caacagcacg ctcgacggca gccgtctctt ccgcaaacca ggccacttca agcggaccgg
    14881 gtgccatacg ccactcttca gtaatggctt ccgccacata acgttgctgg cgcttaatgc
    14941 cgtgatgcag gaactttgcg cctccgcgca tggctttgct gattccttca gcggcgatat
    15001 caccggtata aggggccagc agttccgcag ggtcgaactc tgccagatct gccagcgcaa
    15061 cgaagttttg caccacctga atatcgccct gcacttccag ctcaccactg cgaatcagtg
    15121 cggtaagctg ctggcgatcg cgaagtttcg gcaacacact ggcgtaggcg ataacggtgc
    15181 agtcagcatc gcctgcccat tcgcccagta catcaacctg gcgttcgctg aacaccagaa
    15241 tcaatgacgt cgaaaagcct tttacctcca cgcgcaatac tttacccagc agacgcgagc
    15301 gggctgtttt cagcgcgggt gagcgataca ggaaggtgtt gagcagactt tcaattcctg
    15361 ccgtcactaa aggtttaaaa ggcatttccg gtctcctgtc agaacttata accacgatgc
    15421 agcgccacaa cccctgccgt cagattgtag tagtcgacac tttcgaatcc ggcatcctgc
    15481 atcatggctt tcagggtatc ctgatcggga tgcatacgga tggattctgc cagataacgg
    15541 tagctgtcgg cgtcgttcgc gaccagtgag ccaatacgcg gcagcacatg gaaggagtat
    15601 gcatcatagg ctttgctcag cggctcgata attggcttcg agaactcaag caccagcagg
    15661 cggccgccgg gtttcagcac gcgatacatt gaacgcagtg ctttatcttt gtcggtgacg
    15721 ttacgcagac caaacgaaat ggtgatgcaa tcaaaggtgt tatccgggaa cggcagcgcc
    15781 tcagcgttcg cctgaacata ctcaacgttg ccaatcacac cgatattacg cagcttctcg
    15841 cgtcccattt tgagcatgga ttcattgata tcagcaagga ccactttgcc agtttctccg
    15901 accaggcggg agaatttcgc tgtcaggtcg ccggtgccac cagccagatc cagcacggtc
    15961 tgcccacggc gtacgccgct gcaatcaatc gtgaatcgct tccacaaacg atgaatacca
    16021 aatgacatca aatcattcat gacatcgtat tttgatgcca cggaatggaa aacgtgggcg
    16081 accatatccg ctttttgttc cttcgcgacg gtctgaaaac caaagtgcgt cgtttcttgt
    16141 gacttatcca ccatctcaat gcctgctcat caaaaaattg ttccagaagt gtaacagatt
    16201 gggcgtcgat gccctagatt tctacccggc ttaactaccc ctaatgggct agcgcgactg
    16261 ctgattatat tcatcatcgc gttgataagc ttcatcattc ggctgctccg gaaccgaccg
    16321 aagtcgatac tcttcatcct ggctcaccgc ctgttcagcc aaatccggat taatctcgcg
    16381 tttaatttct actcctaaac cgcgaaacgc ttctgcctgc gccagcacat ttccgcgacc
    16441 tgaagagagt tttttcattg cctggcggta gttatcctgc gctttgtcga gactttgacc
    16501 aatcgcggac atgtcatcga tgaacaaacg catcttgtcg tacagcttgc tggcacgatc
    16561 ggcgatttgc tgggcgttgc ggctttgatg ctcataacgc cacaggttgg caatagtacg
    16621 caacgccacc agcagcgtag tcgggctaac cagcatgata ttgtttttca acgcttcggt
    16681 gatcagctcc ggctggcggt caagcgccag taaaaaagcg ggttcaacgg gaataaacat
    16741 cagcacgtaa tccagagttc gcagccccgg cagctgttga taatctttgc gtcccagcaa
    16801 acggatatgg ttacgcaccg acgcgatatg ttcctgtagc gcgctttcgc gggtgtagtc
    16861 gtcttcggcg ttaaaatagc gttcataggc gaccagcgtc attttggcgt cgatcaccac
    16921 atcttttccc tgcggcagcc gcacgatgac atccggctgc atccgcgagt gggcgtcatt
    16981 ttcgatgctg acctgggttt catattcata cccttcacgc agaccggaag cctccagcac
    17041 ccgcgtcaat actacctcgc cccagttgcc ctgggtttta ttgtcgcctt tcagcgcgcg
    17101 cgtcaggttg atcgcttcct gggccatttg cgcgttgagt tgctggagat tgcgaatttc
    17161 gtgggtcagg gtatggcgtt cttgtgcttc tttaccgaag ctgtcctgaa cctgacggcg
    17221 gaaaccgtcc agttgttcac gtagcggcga caacaggctg ttcagactct gacggttttg
    17281 ctcatcaacc cggcgattgc tgtgctcaaa aatacggttg gcgaggtttt caaactgctc
    17341 actgaggcgc tgctcgctgt taatcatctg gcgaatttta tcgtcagcat gttgctgtgc
    17401 ggcttccatc cgcgtggtta cttcacgcag atcggcctcc agagaggtgt taatactttg
    17461 caggctgcgc acttcgttat tgagtaactc gcactctgca cgccagtgct cgctttgggt
    17521 aatttgttgt tttgccgcgc ttaactccgc gaccatctct tcacgttcag ctaattgctc
    17581 ggctttttgc tgcgcatgtt gataactggc aaacagccag ccaattgcca cacccaccaa
    17641 cgcaataact gcgtaaacca tgattgagaa atccacaacg cctcctgacg caacaactta
    17701 cccgcacaaa atagaattgt gctgtacaaa cgtccagttg gaaaggcatt tcctgcgagg
    17761 cgctacgcaa aaatacaaaa ggccgaacgc gtcggccttc agacaggaga agagaattac
    17821 agcagacgac gcgccgcttc caccacgatt ttcaccgctt ggctttcagt ttgtttcatc
    17881 gtctcagcat tcgggatctc ttgctgggtg cggttaacga taacacccgc taccataccg
    17941 gcacgcaggc cctgacttgc acacatggtc agcagggttg cagattccat ttcatagttc
    18001 attacgccca tcgcctgcca ctcttccata gaacctttaa agtgacgaac tacgcgacca
    18061 gagtaagtat cgtaacgttc ctggcctggg tagaaggtat cagaagaagc tgtcacgcca
    18121 acgtgagttg tcgcgccaat ggatttcgca gcttcaacca gcgcagtcgt acattcgaaa
    18181 tcagcgacag ccgggaattc cagcggtgcg aagtgcaggc tcgcgccatc cagacggaca
    18241 gacgccgtgg taaccaggac atcacccaca ttaatatgcg gctgaatagc gcccgttgta
    18301 ccgatacgca ggaaggtgcg aatgcccagc tgtgccagct cttcaacagc aatagaggta
    18361 gacgggccgc cgataccggt agagcagacg ataacaggtt taccatccag ctctgcacgc
    18421 caggtggtga attcgcggtg agatgccagc ttaaccggct tatccatcag cgcggcgatc
    18481 ttttccacac gatccgggtc gccagggacg atggcaagcg tagccccttg taaatcgttt
    18541 ttagtgaggc cgagatgaaa aacatcagac ttggacatat acaactcctc tgtgaatcgg
    18601 tttagtcaga agaagcaaaa agacacttta ccgaagggtt taacattttt tcgtgatact
    18661 catcaccatg acgcaaatgc gttgcataaa tttacccacc aaaagtgatg caaatcacat
    18721 aaatcactct tcattctgca ggactgcata aaagatgagc cgattcaggc aatgtgattt
    18781 gttgcatgct gactatagtt aacattgcgc aacattttta taagggtacg gagaatacca
    18841 tggcaacaac acaacaatct ggatttgcac ctgctgcatc gcctctcgct tcgaccatcg
    18901 ttcagacccc ggacgacgcg attgtggcgg gcttcacctc tatcccttca caaggggata
    18961 acatgcctgc ttaccatgcc agaccaaagc aaagcgatgg cccactgcca gtggtcattg
    19021 tagtgcagga aatttttggc atgcatgaac atatccgcga catttgtcgc cgtctggcgc
    19081 tggaggggta tctggctatc gcacctgaac tttacttccg cgaaggcgat ccgaatgatt
    19141 ttgccgatat ccccacgttg cttagcggtc tggtagcaaa agtgcctgac tcgcaggtgc
    19201 tggccgatct cgatcatgtc gccagttggg cttcccgcaa cggcggcgat gttcatcgtt
    19261 taatgatcac cggattctgc tggggtggac gtatcacctg gctgtatgcc gcgcataatc
    19321 cacagctaaa agctgcagtg gcgtggtacg gcaaactgac gggcgacaag tcgctaaatt
    19381 caccgaaaca acctgttgat atcgcaaccg atcttaacgc gccggttctc ggcttatatg
    19441 gtggtcagga taacagcatt ccgcaggaga gcgttgaaac catgcgccag gcgctgcggg
    19501 ctgctaatgc gaaagcagag attatcgtgt acccggacgc cgggcatgca ttcaacgctg
    19561 attatcgccc gagctatcat gccgaatctg cgaaagatgg ctggcagcgt atgctggaat
    19621 ggtttaagca gtatggtggg aagcggagtt agtttcctct tagtctatat ttgagatggt
    19681 gagtgaacga gtgcgttttg ctgccatctc tgtcccccaa aaaataatca gtatgaattg
    19741 attggagatt acgactccgc tatttgacct taagaaggtc ggcaagtcat agtcataaat
    19801 gagtctcttc aatggaagac accttagaga tttaccatct actcccattc acaaacaaac
    19861 attaattatt atcaacacat tcacattaat tataaatcat ctcagacctt cctgataaaa
    19921 agatattaaa gtgaaacatt ttgtttttca cattttagtt catcactttt aggcgtaaat
    19981 aaaggtaaaa aaaacaacaa tactatttct ctttcacaaa agaattaaca aaaggttttt
    20041 taaggatgag tgatattatt tacttgacca taaccggaga acaacaagga tgtatttcct
    20101 ctctttgtgg aacgagcgca tcaataggta atcgctggca gattggccat gaagatgaaa
    20161 tcttcgcgtt ctcgctctct aatagtatta cgaatgcagg caaagggtca caattgcatg
    20221 gccttagttt ctgtaaattc ttattaacgc tattaacaat aacgagcagt tgttcatggc
    20281 gtttgacttc tatcggatca atagatttgg tcgatgggag aaatattaca acattcaact
    20341 ccgcggcgcg ctcttatcag caatcaatca cctgtttact gagaacaatc tggatacaga
    20401 agccatcact gtcagttatg aatatatact ctccaggcat ctgattgcta atactgaatt
    20461 tagttatttg gcatttcccg ataactacaa ccgtctgttt ataccacggc caaaaactaa
    20521 agctggtaat ggttcaaaac acttaatagt aaagcggttg gcagactgct tgctgctggc
    20581 ggcatataca atgggaatat cgaaggattc agggaaacag cagacaagtt ggggggagat
    20641 gcacctgctg gttacgatca atttatggat aacaaagggt tactcatcgc tggtgcttca
    20701 atagttgctg gagcagttct ggggagaatg agactccctg atttggaatc acttgagcat
    20761 ttcggagcca gaggagcagt atcaggaa
//
LOCUS       DADMJE010000060        20730 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.061, whole genome shotgun sequence.
ACCESSION   DADMJE010000060 DADMJE010000000
VERSION     DADMJE010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20730
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.061"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..260)
                     /locus_tag="JN001_002026"
     CDS             complement(<1..260)
                     /locus_tag="JN001_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053265.1"
                     /translation="MNRFVVAEPLWCTGCNTCLAACSDVHKTQGLQQHPRLALAKTST
                     ITAPVVCHHCEEAPCLQVCPVNAISQRDDAILRCTGNSGHYH"
     gene            complement(513..983)
                     /gene="bcp"
                     /locus_tag="JN001_002027"
     CDS             complement(513..983)
                     /gene="bcp"
                     /locus_tag="JN001_002027"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-dependent thiol peroxidase"
                     /protein_id="HAY9053266.1"
                     /translation="MNPLKAGDIAPKFSLPDQDGEQVNLTDFQGQRVLVYFYPKAMTP
                     GCTVQACGLRDNMDELKKAGVDVLGISTDKPEKLSRFAEKELLNFTLLSDEDHQVCEQ
                     FGVWGEKSFMGKTYDGIHRISFLIDADGKIEHVFDDFKTSNHHDVVLNWLKEHA"
     gene            complement(983..1555)
                     /locus_tag="JN001_002028"
     CDS             complement(983..1555)
                     /locus_tag="JN001_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system transcriptional
                     repressor"
                     /protein_id="HAY9053267.1"
                     /translation="MTLSSQHYLVITALGADRPGIVNTITRHVSSCGCNIEDSRLAML
                     GEEFTFIMLLSGSWNAITLIESTLPLKGAELDLLIVMKRTTARPRPPMPASVWVQVDV
                     ADSPHLIERFTALFDAHHMNIAELVSRTQPAENERAAQLHIQITAHSPASADAANIEQ
                     AFKALCTELNAQGSINVVNYSQHDEQDGVK"
     gene            1701..2579
                     /gene="dapA"
                     /locus_tag="JN001_002029"
     CDS             1701..2579
                     /gene="dapA"
                     /locus_tag="JN001_002029"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HAY9053268.1"
                     /translation="MFTGSIVAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGT
                     TGESATLNHDEHADVVMMTLELADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLT
                     VTPYYNRPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKNIIGI
                     KEATGNLTRVNQIKELVSDDFVLLSGDDASALDFMQLGGHGVISVTANVAARDMAQMC
                     KLAAEGHFAEARVINQRLMPLHNKLFVEPNPIPVKWACKELGLVATDTLRLPMTPITD
                     SGRETVRAALKHAGLL"
     gene            2596..3630
                     /gene="bamC"
                     /locus_tag="JN001_002030"
     CDS             2596..3630
                     /gene="bamC"
                     /locus_tag="JN001_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708316.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamC"
                     /protein_id="HAY9053269.1"
                     /translation="MAYSVQKSRLAKVAGVSLILLLAACSSDSRYKRQVSGDEAYLEA
                     APLAELHAPAGMILPVTSGDYAIPVTNGSGAVGKALDIRPPAQPLALVSGVRTQFTGD
                     TASLLVENGRGNTLWPQVVSVLQAKNYTITQRDDAGQTLTIDWVQWNRLDEDEQYRGR
                     YQISVKPQGYQQAVTVKLLNLEQAGKPVADAASMQRYSTEMMNVISAGLDKSASDAAN
                     AAQNRASTTMDVQSAADDTGLPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNM
                     AVTYKPLSDSDWQELGASDPGLASGDYKLQVGDLDNRSSLQFIDPKGHTLTQSQNDAL
                     VAVFQAAFSK"
     gene            3843..4556
                     /gene="purC"
                     /locus_tag="JN001_002031"
     CDS             3843..4556
                     /gene="purC"
                     /locus_tag="JN001_002031"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HAY9053270.1"
                     /translation="MQKQAELYRGKAKTVYSTENPDLLVLEFRNDTSAGDGARIEQFD
                     RKGMVNNKFNYFIMSKLAEAGIPTQMERLLSDTECLVKKLDMVPVECVVRNRAAGSLV
                     KRLGIEEGIELNPPLFDLFLKNDAMHDPMVNESYCETFGWVSKENLARMKELTYKAND
                     VLKKRFDDAGLILVDFKLEFGLYKGEVVLGDEFSPDGSRLWDKETLEKMDKDRFRQSL
                     GGLIEAYEAVARRLGVQLD"
     gene            4724..5587
                     /locus_tag="JN001_002032"
     CDS             4724..5587
                     /locus_tag="JN001_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="neutral zinc metallopeptidase"
                     /protein_id="HAY9053271.1"
                     /translation="MRWQGRRESDNVEDRRNSSGGPSMGGPGFRLPSGKGGLILLIVV
                     LVAGYYGVDLTGLMTGQPVSQQQSTRSISPNEDEAAKFTSVILATTEDTWGQQFEKMG
                     KTYQQPKLVMYRGMTRTGCGAGQSIMGPFYCPADGTVYIDLSFYDDMKDKLGADGDFA
                     QGYVIAHEVGHHVQKLLGIEPKVRQLQQNATQAEVNRLSVRMELQADCFAGVWGHNMQ
                     QQGVLETGDLEEALNAAQAIGDDRLQQQSQGRVVPDSFTHGTSQQRYSWFKRGFDSGD
                     PAQCNTFGKSI"
     gene            5602..7617
                     /locus_tag="JN001_002033"
     CDS             5602..7617
                     /locus_tag="JN001_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(Met) cytidine acetyltransferase"
                     /protein_id="HAY9053272.1"
                     /translation="MAELTALYTLTAQMKREGIRRLLVLSGEEGWCFDHALKLRDALL
                     GDWLWISPQPDAENHCSPSALQTLLGREFRHAVFDARHGFDAAAFAALSGTLKAGSWL
                     VLLLPVWEEWENQPDADSLRWSDCPDPIATPHFVQHLKRVLTADNDAILWRQNQPFSL
                     AHFTPRTDWHPATGAPQPEQQQLLQQLLTMPPGVAAVTAARGRGKSALAGQLISRIAG
                     SAIVTAPAKAATDVLAQFAGEKFRFIAPDALLASDEQADWLVVDEAAAIPAPLLHQLV
                     SRFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFELQQPIRWAQGCPLEKMVSEAL
                     VFDDENFTHTPQGNIVISAFEQTLWRSEPETPLKVYQLLSGAHYRTSPLDLRRMMDAP
                     GQYFLQAAGENEIAGALWLVDEGGLSQQLSQAVWAGFRRPRGNLVAQSLAAHGSNPLA
                     ATLRGRRVSRIAVHPARQREGVGQQLIASALQYTQDLDYLSVSFGYTGELWRFWQRCG
                     FVLVRMGNHREASSGCYTAMALLPMSDAGKQLAEREHYCLRRDAQALAQWNGETLPVD
                     PLNDIVLSDDDWLELAGFAFAHRPLLTSLGCLLRLLQTSELALPALRGRLQKNASDAQ
                     LCTTLKLAGRKMLLVRQREEAAHALFALNDVRTERLRDRITQWQFFH"
     gene            7691..8389
                     /gene="ypfH"
                     /locus_tag="JN001_002034"
     CDS             7691..8389
                     /gene="ypfH"
                     /locus_tag="JN001_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311362.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY9053273.1"
                     /translation="MKHDHFVVQSPDKPVQQLLLLFLGVGDNSVAMGEIGSWFAPLFP
                     DALVVSVGGAEPSGNPAGRQWFSVQGITEDNRQARVDAIMPTFIETVRYWQKQSGVGA
                     NATALIGFSQGAIMALESIKAEPGLASRVIAFNGRYASLPETASTATTIHLIHGGEDP
                     VIDLAHAVAAQEALISAGGDVTLDIVEDLGHAIDNRSMQFALDHLRYTIPKHYFDEAL
                     SGGKPGDDDVIEMM"
     gene            complement(8499..8699)
                     /locus_tag="JN001_002035"
     CDS             complement(8499..8699)
                     /locus_tag="JN001_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpfN family protein"
                     /protein_id="HAY9053274.1"
                     /translation="MDWLAKYWWILVIVFLVGVLLNVIKDLKRVDHKKFLANKPELPP
                     HRDFNDKWDDDDDWPKKDQPKK"
     gene            complement(8727..9854)
                     /gene="dapE"
                     /locus_tag="JN001_002036"
     CDS             complement(8727..9854)
                     /gene="dapE"
                     /locus_tag="JN001_002036"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020078199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HAY9053275.1"
                     /translation="MSCPVIELTQQLIRRPSLSPDDAGCQALLIERLQAIGFTVERMD
                     FADTQNFWAWRGQGETLAFAGHTDVVPPGDADRWINPPFEPTIRDGMLFGRGAADMKG
                     SLAAMVVAAERFVAQHPNHTGRLAFLITSDEEASAHNGTVKVVEALMARNERLDYCLV
                     GEPSSIEVVGDVVKNGRRGSLTCNLTIHGVQGHVAYPHLADNPVHRAAPFLNELVAIE
                     WDQGNEFFPATSMQIANIQAGTGSNNVIPGELFVQFNFRFSTELTDEMIKAQVLALLE
                     KHQLRYTVDWWLSGQPFLTARGKLVDAVVNAVEHYNEIKPQLLTTGGTSDGRFIARMG
                     AQVVELGPVNATIHKINECVNAADLQLLARMYQRIMEQLVA"
     gene            complement(9858..10214)
                     /locus_tag="JN001_002037"
     CDS             complement(9858..10214)
                     /locus_tag="JN001_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArsC family reductase"
                     /protein_id="HAY9053276.1"
                     /translation="MVTLYGIKNCDTIKKARRWLEANNIDYRFHDYRVDGLDSELLNG
                     FINELGWEALLNTRGTTWRKLDETTRNKITDAASAAALMTEMPSIIKRPLLCAPGKPM
                     LLGFSDSSYQQFFHEV"
     gene            10595..10654
                     /gene="ypfM"
                     /locus_tag="JN001_002038"
     CDS             10595..10654
                     /gene="ypfM"
                     /locus_tag="JN001_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YpfM"
                     /protein_id="HAY9053277.1"
                     /translation="MIERELGNWKDFIEVMLRK"
     gene            complement(10753..13861)
                     /gene="acrD"
                     /locus_tag="JN001_002039"
                     /pseudo
     CDS             complement(10753..13861)
                     /gene="acrD"
                     /locus_tag="JN001_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416965.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease AcrD"
     gene            complement(14024..15724)
                     /gene="narQ"
                     /locus_tag="JN001_002040"
     CDS             complement(14024..15724)
                     /gene="narQ"
                     /locus_tag="JN001_002040"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarQ"
                     /protein_id="HAY9053278.1"
                     /translation="MIVKRPVSASLARAFFYIVLLSILSTGIALLTLASSLRDAEAIN
                     IAGSLRMQSYRLGYDLQSGSPQLNAHRQLFQQALHSPVLTNLNVWYVPEAVKTRYAHL
                     NANWLEMNNRLSKGDLPWYQANINNYVNQIDLFVLALQHYAERKMLLVVAISLAGGIG
                     IFTLVFFTLRRIRHQVVAPLNQLVTASQRIEHGQFDSPPLDTSLPNELGLLAKTFNQM
                     SSELHKLYLSLEASVEEKTRDLHEAKRRLEVLYQCSQALNTSQIDVHCFRHILQIVRD
                     NEAAEYLELNVGENWRISEGQPNPELPMQILPVTMQETVYGELHWQNSHVSSSEPLLN
                     SVSSMLGRGLYFNQAQKHFQHLLLMEERATIARELHDSLAQVLSYLRIQLTLLKRSIP
                     EDNATAQSIMADFSQALNDAYRQLRELLTTFRLTLQQADLPSALREMLDTLQNQTSAK
                     LTLDCRLPTLALDAQMQVHLLQIIREAVLNAMKHANASEIAVSCVTAPDGNHTVYIRD
                     NGIGIGEPKEPEGHYGLNIMRERAERLGGTLTFSQPSGGGTLVSISFRSAEGEESQLM
                     "
     gene            15930..17909
                     /gene="aegA"
                     /locus_tag="JN001_002041"
     CDS             15930..17909
                     /gene="aegA"
                     /locus_tag="JN001_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent uric acid utilization protein
                     AegA"
                     /protein_id="HAY9053279.1"
                     /translation="MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITV
                     IKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTM
                     QIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDVALSGMAKSRRLR
                     TARQEHQPWHTSTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRAD
                     QAQREASRCLKCGEHSVCEWTCPLHNHIPQWIELVKAGNIDAAVELSHQTNTLPEITG
                     RVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDLSHVTKVDKRVAIIG
                     AGPAGLACADVLTRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGI
                     HFELNCEVGKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTK
                     QVMGLEELPEEPFINTAGLNVVVLGGGDTAMDCVRTALRHGASNVTCAYRRDEANMPG
                     SKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRRPVPVEG
                     SEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGG
                     DAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH"
     gene            17977..18552
                     /gene="nudK"
                     /locus_tag="JN001_002042"
     CDS             17977..18552
                     /gene="nudK"
                     /locus_tag="JN001_002042"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDP-mannose pyrophosphatase NudK"
                     /protein_id="HAY9053280.1"
                     /translation="MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDR
                     GNGATILLYNAKKKTVVLIRQFRVATWVNGNESGQLIETCAGLLDNDEPEVCIRKEAI
                     EETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPF
                     SQALEMIKTGEIRDGKTVLLLNYLQTSHLMD"
     gene            18678..19721
                     /locus_tag="JN001_002043"
     CDS             18678..19721
                     /locus_tag="JN001_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1176 domain-containing protein"
                     /protein_id="HAY9053281.1"
                     /translation="MRYRIFLLFFFALLPTSLVWAAPAQRAFSDWQVTCNNQNFCVAR
                     NTGDHNGLVMTLSRSAGAHTDAVLRIERGGLKSPEASEGEIAPRLLLDGEPLALSGDK
                     WRISPWLLVTDDTATITAFLQMIQEGKAITLRDGNQTISLSGLKAALLFIDAQQKRVG
                     SETAWIKKGDEPPLSVPPAPALKEVAVVNPTPTPLSLEERNDLLDYGNWRMNGLRCSL
                     DPLRREVNVTALTDDKALMMISCEAGAYNTIDLAWIVSRKNPLASRPVRLRLPFNNGQ
                     ETNELELMNATFDEKSRELVTLAKGRGLSDCGIQARWRFDGQRFRLVRYAAEPTCDNW
                     HGPDAWPTLWITR"
     gene            complement(19831..20726)
                     /locus_tag="JN001_002044"
                     /pseudo
     CDS             complement(19831..20726)
                     /locus_tag="JN001_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001300650.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
BASE COUNT         5010 a         5299 c         5548 g         4873 t
ORIGIN      
        1 aaatggtagt gtccgctatt gccagtacac ctcaggatcg catcatccct ctgggagatg
       61 gcattgaccg ggcagacctg caggcaaggg gcttcctcac agtgatgaca cacgacaggg
      121 gcagtgattg ttgacgtctt cgccagggcc aggcgcgggt gttgctgtaa accttgcgtt
      181 ttatgcacgt ccgaacaggc agcgagacag gtattacatc ctgtacacca cagtggttcg
      241 gccaccacaa agcggttcat gtcggctcct tgaaaatgat atgaaacatt gcatttcata
      301 ttgcataaag gatgccagtc tgattaattt aatatattca ataaattatg tattaacagg
      361 gttctgaacg gtacaaaaat gatggtcatt aacgttcagc aaaaaatgga ttcgacaccc
      421 gtgtcgcagg ggaaagcgag aatgtgatct tgatcacgag aagtgaggtg tgctgaccgc
      481 aagcgcagcc agcacggaat ggagcaaagt aatcaggcgt gttctttcag ccagttcagc
      541 acaacgtcgt ggtgattgct ggttttaaaa tcgtcaaaga catgttcgat tttgccatca
      601 gcgtcaatca ggaagctgat gcgatgaata ccatcgtagg ttttgcccat gaaggacttt
      661 tcaccccaga cgccgaattg ttcgcacacc tggtggtcct catcagacag gagcgtaaag
      721 ttaagcagct ctttttccgc aaaacgggag agtttttcgg gtttatcggt gctgataccc
      781 agcacatcaa cgcccgcttt tttcaactca tccatgttat cgcgtaagcc gcaggcctgt
      841 acggtacagc cgggggtcat ggctttcggg tagaaataaa ccagaacacg ctgtccctgg
      901 aagtcggtca aattaacttg ttctccgtct tgatccggca agctaaattt cggtgcgata
      961 tcaccggctt tcagtggatt cattacttaa ctccatcctg ttcatcatgt tgggaataat
     1021 tgacgacgtt aatactgcct tgtgcattga gttctgtaca tagggctttg aacgcttgct
     1081 caatatttgc tgcgtccgca gatgcggggc tgtgggcggt gatctgaata tgcaactgcg
     1141 cagcccgttc attttcagca ggttgcgtgc gcgacaccag ctccgcaatg ttcatatgat
     1201 gcgcgtcgaa aagtgctgtg aagcgttcaa ttaaatgcgg ggagtctgca acatcgacct
     1261 gaacccagac agatgctggc attggcggac gcggacgcgc cgtcgtgcgc ttcatcacga
     1321 ttaaaagatc cagttcggca cctttcaacg gtaacgttga ttcaatcaga gtaatggcat
     1381 tccatgaacc ggaaagcagc atgataaacg tgaactcttc tcccagcatc gccaggcgac
     1441 tgtcttcaat attacagccg caactactga catgacgggt gatggtgttc acaattccag
     1501 ggcgatcggc acccaacgca gtgatcacca gataatgttg cgatgacagt gtcaaactgg
     1561 ttattccttt aaggggtgag ttgttcttaa ggaaagcata aaaaaaacat gcatacaaca
     1621 atcagaacgg ttctgtctgc ttgcttttaa tgccatacca aacgtaccat tgagacactt
     1681 gtttgcacag aggatggccc atgttcacgg gaagtattgt cgcgattgtt actccgatgg
     1741 atgaaaaagg taatgtctgt cgggctagct tgaaaaaact gattgattat catgtcgcca
     1801 gcggtacttc ggcgatcgtt tctgttggca ccactggcga gtccgctacc ttaaatcatg
     1861 acgaacatgc tgatgtggtg atgatgacgc tggagctggc tgacgggcgc attccggtga
     1921 ttgccgggac cggtgctaac gctactgcgg aagccattag cctgacgcag cgcttcaatg
     1981 acagcggtat cgtcggctgc ctgacggtaa ccccttacta caatcgtccg tcgcaagaag
     2041 gtttgtatca gcatttcaaa gccatcgctg aacatactga cctgccgcaa attctgtata
     2101 atgtgccgtc ccgtactggc tgcgatctgc tcccggaaac ggtgggccgt ctggcgaaag
     2161 taaaaaatat tatcggaatc aaagaggcaa cagggaactt aacgcgtgta aaccagatca
     2221 aagagctggt ttcagatgat tttgttctgc tgagcggcga tgatgcgagc gcgctggact
     2281 tcatgcaatt aggcggtcat ggggttattt ccgttacggc taacgtcgca gcgcgtgata
     2341 tggcccagat gtgcaaactg gcagcagaag ggcattttgc cgaggcacgc gttattaatc
     2401 agcgtctgat gccattacac aacaaactat ttgtcgaacc caatccaatc ccggtgaaat
     2461 gggcatgtaa ggaactgggt cttgtggcga ccgatacgct gcgcctgcca atgacaccaa
     2521 tcaccgacag tggtcgtgag acggtcagag cggcgcttaa gcatgccggt ttgctgtaaa
     2581 gtttagggag atttgatggc ttactctgtt caaaagtcgc gcctggcaaa ggttgcgggt
     2641 gtttcgctta ttttattact cgctgcctgt agttctgact cacgctataa gcgtcaggtc
     2701 agtggtgatg aagcctacct ggaagcggca ccgcttgcgg agcttcatgc cccggctgga
     2761 atgattttgc cggtgacctc cggtgattat gcaatcccgg tgaccaacgg tagtggtgct
     2821 gtcggtaagg cgctggacat tcgtccacca gcccagccgc tggcactggt ttctggcgtg
     2881 cgtacccagt tcacgggcga taccgcttca ttgctggtgg aaaatggtcg tggcaatact
     2941 ctgtggccgc aggtggttag cgtgctgcag gcgaaaaact acaccatcac ccaacgtgat
     3001 gatgctggtc agacactgac catcgattgg gtacaatgga accgtctgga cgaagacgag
     3061 cagtatcgtg gtcgttatca aatctctgtt aagccgcagg gttatcagca ggcggttacg
     3121 gttaaactgc tgaacctgga acaggcgggc aaaccggttg cagacgcggc ttccatgcag
     3181 cgttacagca cggagatgat gaacgttatt tccgccggtc tggataaatc tgcctctgac
     3241 gccgcgaacg ctgcgcaaaa tcgtgcctcc accactatgg acgtacaaag tgcagctgat
     3301 gacaccggtt taccgatgct ggtcgtacgc gggccgttca atgtggtttg gcaacgtctg
     3361 ccagcggcgc tggaaaaagt gggcatgaaa gtgaccgaca gcacccgttc gcagggtaac
     3421 atggccgtaa cttataagcc gctgtctgac agcgactggc aggaactggg cgcgagcgat
     3481 ccaggcctgg catccggtga ctataaattg caggttggcg atttagataa ccgcagcagc
     3541 ctacagttca tcgatccgaa aggtcatact ctgactcaga gtcagaacga cgcgctggta
     3601 gctgtcttcc aggctgcgtt tagcaagtaa aaatataggg ctggagtcat ccggcccttt
     3661 tttctgatat gatacgcaaa cgtgtgcgtc ggcagaaaaa tgcaatttta gcggtaattc
     3721 gcacgaaatt tgtttgtcgg acgtaggtcg gataaggcgt tcttgccgca tccgacaaaa
     3781 catccggcac accagacagc aaaagatttt aaaacgttaa ttcacaccca ggagtgataa
     3841 agatgcaaaa gcaagctgag ttgtatcgtg gtaaagcgaa aaccgtatac agcacggaaa
     3901 acccggacct gttggtgctc gaattccgca atgatacgtc agcaggggat ggcgcgcgca
     3961 ttgagcagtt tgatcgcaaa ggtatggtga acaacaagtt caactacttc attatgagca
     4021 aactggctga agcgggtatc ccgactcaaa tggagcgtct gctctccgat accgaatgtc
     4081 tggtgaaaaa gctggatatg gtgccggttg agtgtgtcgt gcgtaaccgt gctgctggct
     4141 ctctggtgaa acgtcttgga atcgaagaag gtattgagct gaacccgccg ctgttcgatc
     4201 tgttcctgaa aaacgatgcc atgcacgatc cgatggtcaa cgaatcttac tgcgaaacct
     4261 ttggctgggt gagcaaagag aacctggcgc gtatgaaaga gctgacctac aaagcgaacg
     4321 acgtgctgaa aaaacggttc gatgatgctg gtctgattct ggtcgacttc aagctggagt
     4381 ttggtctgta caaaggtgaa gtggtactgg gcgatgagtt ctccccggac ggcagccgcc
     4441 tgtgggacaa agaaacactg gagaaaatgg acaaagaccg tttccgccag agcctcggtg
     4501 gcctgatcga agcctatgaa gccgtcgccc gccgcctggg tgtacagctg gactgatttt
     4561 tctgttcatc atcttgccgt gcagctggca cggcaagaca accgctctcg gaatatatgc
     4621 attgaacgct cattcctccg ccatttcatc ccgctttcct gtggtaatct tcctctgaac
     4681 cacctacgat catttctata atgaatatat tgttgaggta tctatgcgtt ggcaagggcg
     4741 acgtgaaagt gacaatgttg aagacaggcg caacagctcc ggtggtccgt ctatgggcgg
     4801 tcccggtttt cgcctgccaa gcggtaaagg cgggctgatt ttactgatag tcgtgctggt
     4861 tgcaggctac tatggtgttg atttaaccgg gttaatgact ggacagccgg tttcccaaca
     4921 acaatcaacg cggtccatta gccctaatga agacgaagct gcaaaattca cctcggtgat
     4981 tctggcaacc acggaagaca cctggggaca acagttcgag aagatgggta agacctatca
     5041 gcaaccgaag ctggtcatgt accgtggaat gacgcgcacc ggctgcgggg cgggccagtc
     5101 cattatgggg ccgttctatt gcccggcgga tggcacagtt tatatcgatc tctccttcta
     5161 tgatgacatg aaagacaaac ttggcgcgga tggcgatttt gcccaggggt acgttatcgc
     5221 ccatgaagtc ggtcatcatg tgcagaaact gttaggcatc gagccgaaag ttcgtcaact
     5281 gcaacaaaac gcgacgcagg cggaagtgaa ccgcttatct gtgcgtatgg aactccaggc
     5341 cgactgtttt gccggtgtct gggggcataa catgcagcag caaggcgttc tggaaaccgg
     5401 cgatctggaa gaggcgctga atgcggcgca ggccatcggc gatgaccgtt tacaacagca
     5461 aagtcagggg cgagtagtac cagacagttt cacacatggc acttctcagc aacgctacag
     5521 ctggtttaaa cgtggtttcg acagcggcga tccggcacaa tgcaatactt ttggtaaaag
     5581 catttaattt ccggggcagg gatggctgaa ctgactgcgc tttacacatt aacagcgcaa
     5641 atgaaacgtg aagggatccg ccgcttgctg gtgttgagcg gggaagaggg ttggtgtttt
     5701 gatcatgcgc ttaagttgcg tgatgcctta cttggcgact ggctgtggat ttcgccgcag
     5761 ccagatgctg aaaaccactg ttctccctcg gcgctacaaa ctttacttgg gcgcgagttc
     5821 cggcatgcgg tattcgacgc ccgccacggc tttgatgccg ctgcctttgc ggcacttagc
     5881 ggaacgttga aagcgggaag ctggctggtt ttgttactcc ctgtatggga agagtgggaa
     5941 aaccaacctg atgccgactc gctgcgctgg agtgattgcc ctgaccctat tgcgacgccg
     6001 cattttgtcc agcatctcaa acgcgtactt acggcggata acgacgctat tctctggcgg
     6061 caaaaccagc cgttctcgtt ggcgcatttt actccccgta ctgactggca ccccgcgacc
     6121 ggcgcaccac aaccagaaca acagcaactc ttacagcagc tactgaccat gccgccgggc
     6181 gtggcagcgg taacggctgc gcgtgggcgc ggtaagtcgg cgctggcagg gcaactcatt
     6241 tctcgtattg cgggcagtgc gattgtcacc gcgcccgcaa aagcggcaac ggatgtactg
     6301 gcacaatttg cgggcgagaa gtttcgcttt attgcgccgg atgccttgtt agccagcgat
     6361 gagcaagccg actggctggt ggtcgatgaa gccgcagcca tacctgcgcc gttgttgcat
     6421 caactggtat cgcgttttcc tcgaacgttg ttaaccacta cggtgcaggg ctacgaaggc
     6481 accggacgtg gttttttgct gaaattttgc gctcgctttc cgcatttaca ccgttttgaa
     6541 ctgcaacagc cgatccgctg ggcacaggga tgcccgctgg aaaaaatggt tagtgaggca
     6601 ctggtttttg acgatgaaaa cttcacccat acaccacaag gcaatatcgt catttccgca
     6661 tttgaacaaa cgttatggcg aagcgagcca gaaacgccgt taaaggttta tcagttattg
     6721 tctggtgcgc actaccggac ttcgccgctg gatttacgcc ggatgatgga tgcaccaggg
     6781 caatattttt tacaggcggc tggcgaaaac gagattgccg gagcgctgtg gctggtggat
     6841 gaggggggat tatctcaaca actcagtcag gcggtatggg caggttttcg tcgcccgcgg
     6901 ggtaatctgg tggcccagtc gctggcggcg cacggtagca atccactggc agcgacattg
     6961 cgtggacggc gggtcagccg gatagcagtt catccggctc gtcagcgcga aggcgttggg
     7021 caacagctca ttgccagcgc tttgcaatat acgcaagacc tcgactatct ttcggtgagt
     7081 tttggttaca ccggggagtt atggcgtttc tggcaacgct gcggttttgt gctggtacga
     7141 atgggtaatc atcgtgaagc cagcagtggt tgctatacgg cgatggcgct gttaccgatg
     7201 agtgatgcgg gtaaacagct ggctgaacgt gagcattact gtttacgtcg cgatgcgcaa
     7261 gctctcgcgc agtggaatgg cgaaacactt cctgttgatc cactaaacga tatcgtgctt
     7321 tctgacgacg actggcttga actggccggt tttgcttttg ctcatcgtcc gctattaacg
     7381 tcgttaggtt gcttattgcg tctgctacaa accagtgaac tggcattacc ggcgctgcgt
     7441 gggcgtttac agaaaaatgc cagtgatgcg cagttatgta ccacacttaa acttgcaggc
     7501 cgcaagatgt tactggtccg tcagcgggaa gaggccgcgc atgcgctgtt cgcacttaat
     7561 gatgttcgca ctgagcgtct gcgcgatcgc ataacgcaat ggcaattttt tcactgactc
     7621 cttcaatttt ctcccatggt cattgtgagc cagcggcgta aaattaatga catcagttaa
     7681 ggagttcgcc atgaaacatg accattttgt tgttcaaagc ccggataaac ctgtgcaaca
     7741 gttgttactg cttttcctcg gtgtcgggga taactcggtg gcaatggggg aaataggcag
     7801 ttggtttgca ccgctgtttc ctgatgcgct ggtggtgagt gtcggtggcg cggagccgag
     7861 cggtaatccg gcggggcgtc agtggttttc ggtgcagggt attacggaag ataatcgcca
     7921 ggcgcgtgtg gatgccatca tgccgacgtt tattgaaacg gtacgctact ggcagaaaca
     7981 gagtggagta ggggctaacg ccacggcgtt aatcggtttc tctcaaggcg cgattatggc
     8041 gctggagagt attaaagccg aaccgggcct tgcttcacgc gtcattgctt ttaacggacg
     8101 ctatgcgagc ctgccggaaa ccgcgtctac agcaacgaca attcacctga ttcatggcgg
     8161 tgaagatccg gttatcgatc tggcgcatgc ggttgcggcg caggaagcgt taatcagtgc
     8221 cggtggtgac gtgacgctgg atatcgtgga ggatttaggc catgcgatcg acaatcgcag
     8281 tatgcaattt gccctggatc acttgcgtta taccattccg aaacattatt tcgacgaagc
     8341 gctaagtggc ggtaagcctg gcgatgatga tgtgattgaa atgatgtaaa agacagatta
     8401 cctggcctga taagacgcgt gagcgtcgca tcaggcatcg ttcaccattg ccggatgcgg
     8461 cgttaacgcc ttatccggcc tacggttgag cactcagctt acttcttcgg ttgatccttt
     8521 ttcggccagt cgtcgtcatc gtcccactta tcgttgaaat cacgatgcgg gggaagctcc
     8581 ggcttgttgg cgagaaattt cttgtggtcg acgcgcttga gatctttaat cacgttcagc
     8641 aggacgccta ccaaaaagac aatcaccaga atccaccaat atttagccag ccagtccatg
     8701 cttatttcct cttgcagaac cactcatcag gcgacgagct gttccatgat acgttgatac
     8761 atacgggcaa gtagctgcag gtcggcagcg ttcacacatt cattaatttt atgaatagtg
     8821 gcattgaccg gcccgagttc caccacctgc gcccccatgc gagcaataaa gcgcccgtcg
     8881 gacgttccgc ctgtggtcag tagctgcggt ttaatttcat tatagtgctc aaccgcgtta
     8941 acgaccgcat ccaccagttt accgcgcgcg gtcaaaaatg gctgcccgga aagccaccaa
     9001 tccaccgtat agcgcagttg atgtttttca agcagggcaa gcacctgcgc tttgatcatc
     9061 tcatcagtca gttcggtgct gaagcggaag ttaaactgca caaacagttc acccggaata
     9121 acattgttac tgcccgttcc cgcctgaata ttagcaatct gcatactggt cgccgggaaa
     9181 aattcattgc cctgatccca ctcaatagcc actaattcat taaggaaagg tgctgcgcga
     9241 tgtactggat tgtcagccag atgcgggtag gccacatgcc cctgaacgcc atgaatggta
     9301 aggttgcagg ttaacgatcc gcgacgacca tttttcacca catcaccaac cacttcgata
     9361 ctcgacggtt cgccgaccag gcagtaatcg agacgctcat tacgtgccat caacgcttcg
     9421 acgactttta ccgtaccgtt gtgggcactg gcttcttcat cagaggtgat cagaaatgcc
     9481 agtcgccccg tatggttggg atgttgtgcg acaaagcgtt ctgccgctac caccatcgcc
     9541 gccagcgagc ctttcatatc tgccgcaccg cgcccgaata acatgccatc acgaatggtg
     9601 ggttcaaacg gcggattgat ccaacgatcg gcgtcgccag gcggcaccac gtcggtatgc
     9661 ccggcaaagg ctaacgtttc accttgccca cgccatgccc aaaaattctg cgtatcggca
     9721 aagtccatgc gttcaacggt aaaaccgatc gcctgcaaac gttcaatcaa caaagcctgg
     9781 catcctgcgt catcaggact cagggaaggg cggcgaataa gctgttgtgt cagctcaata
     9841 accgggcacg acatagacta cacctcatgg aaaaattgct gataactgga atcactgaaa
     9901 cccagcagca taggcttacc aggcgcgcag agcaatggac gtttgataat tgaaggcatt
     9961 tcagtcatta atgccgccgc agaggccgca tcggtgattt tattgcgggt ggtttcgtcc
    10021 agtttacgcc aggttgtacc acgggtgttc agtaacgctt cccagcctaa ttcgttgata
    10081 aaaccgttca ataattcgct gtccagccca tcgacgcggt aatcatgaaa acgatagtcg
    10141 atgttattgg cttccagcca acggcgagcc tttttaatgg tgtcacaatt tttgatgccg
    10201 taaagtgtaa ccataatgaa tcctttttcg atctatgaga ataaatactc atttaagggt
    10261 gaaaacattt tgcctgcaaa tgattatcag gaaatataac attatcgaag tattcaaatt
    10321 aacaactatt aaataatatt aaacattttt aacgtaaaca ttaagaatat tcatcttgtt
    10381 atctgtctgt attttaacca gaattaaatc agtattagat gccgtatgaa tatctcgaaa
    10441 tgttgctgtg tatcacatac aaattatcac cgcaggacca tagtatttac ataaggtttg
    10501 tcccccggag gtagtcatcg cagcaatcga gtaaattagc ttcaccacgg tatattgttt
    10561 ccgtagaata cccataatta taagagaggt tgttatgatt gaacgtgaac tggggaactg
    10621 gaaagacttt atcgaagtta tgcttcgtaa gtaattcctg agacaaagta caaacagcaa
    10681 gaacccgctg agcaggttct taatcggaaa gttgaaaaag gcgacacatt agcatgtcgc
    10741 cttttttatt gcttattccg ggcgcggctt cagcgggaag cggcggcgca ccagtacaaa
    10801 gaacagcggc acgaagtaaa tagccagaat agtggccgaa atcatcccgc ccattacgcc
    10861 agtacccacc gcatgctgac caccggaacc ggcacccgtg ctggttgcca ttggcaatac
    10921 gccgaagata aatgccagcg aggtcatcag aatcgggcgt aaacgctgac ggcaggcgtg
    10981 gagcgtcgct tcaaacaggt cgtggccttt ttggttcatc tcgttagcaa actcgacgat
    11041 caggatggcg tttttcgccg ataaaccaat gaccgttaac aggcccacct ggaagtaaac
    11101 gtcgttttcc agcccgcgca tccaggttgc cagcagcgcg ccgataaccc ccagcggcac
    11161 gaccagcatt accgagaacg gcaccgacca gctttcaacg ccgccagaca caggaatacc
    11221 accagcaagg aaatggcgta cagcgccgga gcctgcgcgc cggaaagccg ctcctgatac
    11281 gacatcgccg tccactccag accaaagccg tttggcaact gcttcactaa cgattccatt
    11341 atatccatcg ccgtaccggt actgaccccc ggtgcggctt ccccaacaat ctcaaccgca
    11401 gaataaccgt tatagcgttc cagacgcggc gagccagtct cccagcgtga ggtcgcgaaa
    11461 gcagagaagg gcaccatgcc gccatcttta tttcggacat accagagatt aatgtcatct
    11521 ggcagcatgc gatacggcgc agctgcctgc acatagactt tcttcacacg accgcgatcc
    11581 ataaagtcat tcacatagct cgaaccccag gcggtttgca gtgtgtcgtt aatatcgtcg
    11641 atagcaacgc ccagcgcctg agctttacgc tggtcgatat caatctgcaa ctgcggactg
    11701 tcatcgaggc cgttatggcg cacacgggtt agctccgggt tttccgccgc cagcgccagc
    11761 aactggttac gtgctgccat cagcgcatcg tgacctgctc cagcgtggtc ctgcaactcc
    11821 atatcaaaac ccgcagaact accaagaccg ctaattgctg gcgggctgct ggcgataacg
    11881 cgagcttctt taatcttgtt aaacgccttt gttgcacgct cgataatggc aaacgaggtg
    11941 ccggtcttac tgtcgcgttc gctccagtct ttcaggcgga taaacattcg cgccacgttt
    12001 tgcccgttac ccccagggcc agaaccaacg gtggcaaaca ccgacatgat gttgtctttt
    12061 tcatgggtga agtaatattt ctcgatttgc tcaacgactt tcagggtctg ttgttgggtt
    12121 gaaccgctgg gcaattgtac cgaggtagta aacatgccac ggtcttccag cggtaagaac
    12181 gacgtcggca aacgcaggaa caggaacacc atgccgccaa gcagcaggac ataaatcaca
    12241 atccagcgca ggctgcggtg gagaattttc gccacccctt tttcgtagcg ttcggcgttg
    12301 cggttaaaca tctggttaaa ccaggcaaaa aagccttttt gcccgtgatg ctcacctttt
    12361 ttcagtggct taagtagtgt ggcacacaga gccggagtga ggatcatcgc taccagtact
    12421 gacagcacca tcgccgcaac aatggtaata gagaactggc gatagatggc accggtggtg
    12481 ccgccgaaga aggccattgg tacaaatacc gccgaaagca ccatcgcaat cccgaccagt
    12541 gccccctgga tctgccccat cgatttacgt gtggcttcgc gaggagtgag tccttcctca
    12601 ctcataatac gttcgacgtt ttccaccacc acgattgcgt catccaccag cagaccgatc
    12661 gccagtacca tcgcgaacat ggttaaggtg ttgacgctgt aaccgaaggc gtaaagtacg
    12721 gagaaggttc ccatcaacac caccggcacg gcgatagtgg gtatcagcgt ggcgcggaag
    12781 ttttgcagga acagatacat aacgaggaaa accagggcga tagcttccag cagcgttttc
    12841 accacgtctt caatggaggc tttaacaaac gaggttgttt catacgccac cttgtattcc
    12901 agtccgtgcg ggaagtactg cgccagctcg tcgagacgat tgagcaccag ctccctgtcg
    12961 ccatttcgtt tgcgccggag gccagtttta cccccagccc ggaggctggc ttaccattga
    13021 agcggctaag ataatcgtat ttctccgccc ccatttcgac ggtggcgaca tcgcccagcc
    13081 ttacctctga gccgtcttga ttcacccgca aggtgatatc gcggaactgt tctggtgttt
    13141 gcagcagtga ctgggcgtta atggtggcgt tgagcgcctg cttatcgacg gaaggtgtac
    13201 caccaagttg cccaaccgca atctgcgcgt tctgtgactc aatggcatca gtgacatctt
    13261 tagccgtcat ctggaaactg ttgagtttcg ccggggccag ccagatacgc atggaatatt
    13321 gcgaaccata ggcatcgata tccccgacgc cattcacgcg gcttaacggg tcctgaatat
    13381 tactggcaac ataatcggca atatcctgtt tatccatcga accatcggta gagacgaaag
    13441 caatggtcag aatattggta tcgccggttt tacgcaccgt cacgccctga ttttgcaccg
    13501 cctgcggtaa ctttcgcatg gctgattgca gctggttttg tacttgctgc acggcttcgt
    13561 ccggatcggt gcctgcttta aaacttaaag tgacagatgc ctgaccggtg ccactgctct
    13621 gagatgacat atacatgaga ttatcgaggc cggtcatatt ttgctcgata acctggggca
    13681 cggtgttttc cagcgtctgg gccgatgcgc cgggatagtt agcggtcact cgcacattcg
    13741 gtggcgcgag atcggggtat tgttcaacgg gcaatgaaaa aatcgctagg gtccctgtca
    13801 gacacaacag gattgccagc acccaggcaa aaatggggcg atcaataaag aaattcgcca
    13861 ttaaaagagg acctcgtgtt tctgcgtatc gttgtaggct tgacttgctt cactgtagcg
    13921 gcaaggtacg agccaatcgt ggagaaaaaa ggagttaatg taaattatca tgccctttta
    13981 tactgaacct taagtgcaag tattctttgg tcagtaggag gcattacatc aactgacttt
    14041 cctcaccctc tgcagagcga aagctaatac tcactaacgt gccgccgccg gaaggttgtg
    14101 aaaaagtcag cgtcccaccc agccgttccg cgcgttcgcg catgatattc agaccataat
    14161 gaccttcggg ttctttcggt tcaccgatac caatcccgtt atcacggata taaaccgtgt
    14221 gattgccgtc cggcgcggtg acgcaactga cggcgatttc gctggcgttg gcgtgcttca
    14281 tcgcattcag caccgcttcg cgaataattt gcaacaaatg cacctgcatt tgcgcatcca
    14341 gcgcaagggt tggcagacgg cagtcgaggg tcagtttggc gctggtttga ttttgtaacg
    14401 tatccagcat ttccctcaac gcggagggga gatccgcctg ctgcagcgtc aggcggaaag
    14461 tagtcaacag ctcgcgtaac tgccgataag catcattcaa cgcctgggaa aaatcggcca
    14521 tgatactttg tgcggtggcg ttatcttccg gtatcgaacg cttcagtaac gtcaactgga
    14581 tacgtaagta agaaagtacc tgagccagcg agtcgtgcaa ttcgcgggcg atggttgcac
    14641 gttcttccat caacaataaa tgctgaaaat gcttctgcgc ctgattaaag tacaaaccgc
    14701 gtcccagcat cgacgaaacg ctgttaagca gcggttctga tgatgaaacg tgactatttt
    14761 gccagtgcag ttcgccgtaa accgtctctt gcattgtcac cggtaaaatc tgcatcggca
    14821 attccgggtt tggttgccct tcgctaatcc gccagttttc accgacattt aactccagat
    14881 attcagccgc ttcattgtcg cgaacaatct gcaaaatatg gcggaaacaa tgcacatcaa
    14941 tctggcttgt gttcagcgcc tgcgaacatt gatacaacac ctccagacga cgcttggcct
    15001 cgtggagatc gcgggtcttt tcttctactg acgcctccag cgaaaggtac aatttatgca
    15061 gctcgctcga catctggtta aaggtttttg caagcagacc aagctcattc ggcagactgg
    15121 tatccagcgg cggcgagtcg aactgcccgt gttcaatacg ttgactggcg gtaaccagct
    15181 gattcagcgg ggcaaccacc tgatggcgta tacggcgcaa agtaaaaaag accagcgtga
    15241 aaataccgat accgccagcc agggaaatcg ccaccaccag cagcattttg cgttcagcgt
    15301 agtgctgtaa agccagcacg aacaggtcta tctgattaac ataattatta atattggcct
    15361 gataccacgg caaatcgccc ttgctgagcc gattattcat ctccagccag ttggcattca
    15421 gatgcgcata gcgagttttt actgcttctg gcacatacca gacgttgaga ttggttaata
    15481 ccggtgaatg cagtgcctgc tgaaacaact ggcgatgtgc attgagttgt ggactgccac
    15541 tttgcaagtc gtagcccagg cggtaactct gcatacgcag cgatccggca atattgatag
    15601 cctcagcgtc gcgcaaactg ctcgccagag ttagcagagc gatacccgtg gaaagaatcg
    15661 acagcagcac aatgtaaaaa aaggcccggg ccagactggc cgagacgggt cgtttaacaa
    15721 tcacacgcgt cttctccaca aaaaatcatt aatgttccag ttcgctgaaa cgcaatttag
    15781 tcagtgatgg gattatttga gctgccacag tttatagcga aatagttact tattctgggc
    15841 acatgaacat tgccgattcc cctgtaagtc gggtaataac aacactcata taaagaataa
    15901 ggtttttaca accaaaaaag aaggtcgtta tgaatcgttt tattatggcc aacagtcagc
    15961 aatgtctggg ttgtcatgct tgtgaaatcg cctgtgtcat ggctcacaat gatgagcaac
    16021 atgtcctgag ccaacaccat tttcatcccc gaattacggt tatcaaacat cagcagcaac
    16081 gtagtgcagt gacctgtcac cattgtgaag atgcgccctg cgcccgtagc tgccctaatg
    16141 gcgcaatcag ccacgttgat gacagcattc aggtcaatca gcaaaagtgt attggctgta
    16201 aatcctgcgt ggtggcctgt ccgtttggta cgatgcaaat cgtcctgaca cccgtcgcgg
    16261 caggaaaagt aaaagccacg gcgcataaat gcgacctttg tgcagggcgc gaaaacggtc
    16321 ctgcctgtgt cgagaattgc ccggcggacg cgctgcaact ggtcactgac gtcgcactct
    16381 ccggcatggc gaaatcccgc cgcttgcgca ccgcacgtca ggagcatcaa ccgtggcata
    16441 ccagtaccgc tgcacaagaa atgccggtaa tgagtaaagt cgaacaaatg caggcaacgc
    16501 ccgcgcgtgg cgagccggat aaactggcga ttgaagcgcg caaaaccggt tttgatgaaa
    16561 tttatctgcc atttcgcgcc gaccaggcac aacgggaagc ctcgcgctgc cttaagtgcg
    16621 gcgagcacag cgtttgtgaa tggacctgcc cgctgcataa ccatattccg cagtggattg
    16681 aactggtgaa agccggaaac atcgacgccg ccgtcgagct ttctcaccag accaacaccc
    16741 tgccggaaat taccggacgc gtttgtccgc aagaccgttt gtgtgaaggt gcctgtacta
    16801 ttcgcgatga gcacggcgcg gtaactatcg gcaacattga acgctatatt tcagatcagg
    16861 cgttggcgaa aggttggcgt cctgacttaa gtcatgtcac caaagtggac aagcgggtgg
    16921 cgattatcgg ggcaggtccg gcagggctgg cctgtgcgga tgttctgacc cgcaatggcg
    16981 tggcggtgac ggtgtacgat cgccatccag aaatcggtgg cttgctcact ttcggcattc
    17041 cttctttcaa actggataaa tccctgctgg cacgccgtcg ggaaatcttc agcgcgatgg
    17101 ggattcactt cgaactcaat tgtgaagtgg gtaaagatgt ctctttggat tcgcttttgg
    17161 aacaatacga cgcggtcttc gttggcgtag gcacttaccg ttccatgaaa gcgggtttac
    17221 ccaatgaaga tgcgccgggc gtttatgacg cgctgccgtt cctcatcgcc aacactaaac
    17281 aggtgatggg gctcgaagag ctaccggaag agccgtttat caataccgcc ggacttaacg
    17341 tcgtggtact gggcggcggc gacaccgcga tggactgtgt gcgtactgcg ctgcgccacg
    17401 gcgcgagtaa cgtcacctgc gcttatcgtc gtgatgaagc taacatgcca ggctcgaaga
    17461 aagaggtgaa gaacgcccgc gaagaggggg ccaacttcga atttaacgtc cagccggtgg
    17521 cgcttgagct gaatgaacaa ggtcacgttt gcgggattcg tttcctgcgc acgcgtcttg
    17581 gcgagccgga tgcccagggg cgtcggcgtc cagtaccggt ggaaggcagt gaatttgtca
    17641 tgccagccga cgcggtgatt atggcgtttg gcttcaatcc gcacgggatg ccgtggctgg
    17701 agtcgcacgg tgtaacggta gacaaatggg gccgcatcat cgcggatgtg gaaagccagt
    17761 accgttacca gaccaccaat ccgaaaatct tcgccggtgg cgacgccgtg cgtggtgcgg
    17821 atctggtggt taccgcaatg gcagaaggac gtcatgcggc acaggggatt attgactggc
    17881 tgggggtaaa atcagtcaaa tctcactgat agcctgcgca gacaaacccg acttcacagc
    17941 gtaagataat tgttcatttc gcgctgtgga gtcggtatga cgcaacaaat caccctcatt
    18001 aaagacaaaa ttctctccga taactatttc accctgcaca acattaccta cgatctcacg
    18061 cgcaaagatg gcgaagttat ccgccataaa cgtgaagttt acgatcgcgg taatggtgcg
    18121 acgatcctcc tgtacaacgc gaagaaaaag accgtggttc tgattcgtca gttccgtgtc
    18181 gctacctggg ttaatggcaa tgaaagcggg cagctgattg aaacctgcgc cgggctgctg
    18241 gataacgacg aaccggaagt gtgcattcgt aaagaagcga ttgaagagac gggctatgaa
    18301 gtgggcgaag tgcgcaaatt atttgaactg tatatgtcgc caggcggtgt gactgagcta
    18361 atccactttt ttatcgccga atacagtgac aatcagcgcg ctaacgccgg tggcggtgtc
    18421 gaagatgaag atattgaagt gctcgagctg ccgttcagcc aggcgctgga gatgatcaaa
    18481 accggcgaga tacgtgacgg taagacggtg ttattgctta actatttgca aacgtcacat
    18541 ttaatggact gaaaaataac aataatattt cgttgtttat tattggctca atccgacaaa
    18601 tccgattgag ccgcgctacc tgcgcaacga agatacgact tgtgctgttt gtttgaactt
    18661 ctggggtcgt accgtccatg cgctatcgca ttttccttct cttttttttc gctttgttgc
    18721 cgacgtcttt ggtgtgggcg gcaccagcgc aacgggcgtt ttccgactgg caggtcacct
    18781 gtaataacca aaacttctgc gtggcgcgta atacgggcga tcataatgga ctggtgatga
    18841 ccctgagccg cagcgccggg gcgcataccg atgccgtttt acgtattgag cgcggcggat
    18901 tgaagtcgcc ggaggcgtca gaaggggaga tagcgccacg gctgctgtta gatggcgagc
    18961 cgttggcgtt aagtggtgac aagtggcgga tttcaccatg gttattagta accgatgata
    19021 cggcaaccat caccgcgttt ttgcagatga ttcaggaagg gaaggcgatc accttacgcg
    19081 acggcaatca gaccatttcg ctgagtggct taaaagcggc gttgttgttt attgatgctc
    19141 agcaaaagcg cgttggcagt gaaaccgcgt ggatcaagaa aggggacgaa ccgccgctca
    19201 gcgtaccgcc cgcgcctgcg ctgaaagagg tcgcggtggt taacccaacg ccgacgccac
    19261 tctcactcga agaacgcaac gatttgctgg attatggaaa ctggcggatg aatggtctgc
    19321 gctgctcgct tgatccattg cgtcgtgagg tgaatgtcac tgcgctgact gatgataaag
    19381 cgctgatgat gattagctgt gaggcagggg cctataacac cattgatttg gcatggattg
    19441 tgtcgcgtaa aaatccgctg gcctcgcgcc cggttcggtt gcgtttgccg ttcaacaacg
    19501 ggcaggagac gaatgaactg gaactgatga acgcaacatt tgatgagaaa tcgcgtgaac
    19561 tggtgacctt agcgaaaggg cgcggattaa gcgattgtgg cattcaggcg cgctggcgct
    19621 ttgacggtca gcgttttcgc ctggtgcgtt acgccgcaga acccacctgc gataactggc
    19681 atgggccaga cgcctggccc acgttgtgga tcacccgtta aacaaaatgg cggggacatg
    19741 taggccggat aagacgctgt aggccggata agacgcgtca gagtcgcatc cggcaatcag
    19801 cgtccggcaa tcagcatccg gcgatcacca tcaggcacct ttcactccca gcaccttatg
    19861 cgcttttgcc acaatattct cggcggtaaa gccaaagaac gggaacagct tatccgccgg
    19921 agcagattcc ccataacctg tcatcccaac aatcgcccct ttcaaaccaa catacttgta
    19981 ccagtaatcg gcaatacctg cttccaccgc cacgcgagcc gcaacgttag aaggcaacac
    20041 cgactcccga tattcctcat cctgggcgtc gaaaatatca gtcgagggca gggaaactac
    20101 gcgtacattg cgaccttctc ccgctaattt ctctgccgct tgcaggggga tttccatctc
    20161 tgaaccggtg gcaatcaaaa taatatctgg cttaccgccg ctgtctttca gcacataacc
    20221 gccacgggca atctctttta cctgatccgg cgtacgttcc acctgggcca gattctgcct
    20281 tgagaggatc agtgccgtcg gtccgttgtg gcgctcaacc gccagcttcc agcccaccgc
    20341 cgcttccacc tgatcgcacg gtcgccaggt gctgaaattt ggcgttaagc gcaggctggc
    20401 cagttgctca acagcctggt gcgtcggacc atcttcgccc aggccaattg agtcgtgggt
    20461 ataaaccata atctgccgcg ctttcatcag tgccgccatc cgcgcggcgt tacgggcgta
    20521 ttcaacaaac atcaggaacg tggcggtata cggcacaaag ccgccgtggt gcgcgatgcc
    20581 gttggctata gcggtcatgc caaattcacg caccccgtag tgaatgtagt tgcccgccgg
    20641 atcttccttc agcgaaacag aacctttcca gatggtcagg ttgctggagc cagatccgcc
    20701 gaaccgccga gcaactcagg cagcatcggc
//
LOCUS       DADMJE010000061        20720 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.062, whole genome shotgun sequence.
ACCESSION   DADMJE010000061 DADMJE010000000
VERSION     DADMJE010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20720)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20720)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20720
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.062"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JN001_002045"
     CDS             complement(73..4533)
                     /gene="mukB"
                     /locus_tag="JN001_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukB"
                     /protein_id="HAY9053282.1"
                     /translation="MIERGKFRSLTLINWNGFFARTFDLDELVTTLSGGNGAGKSTTM
                     AAFVTALIPDLTLLHFRNTTEAGATSGSRDKGLHGKLKAGVCYSMLDTINSRHQRVVV
                     GVRLQQVAGRDRKVDIKPFAIQGLPMSVQPTQLVTETLNERQARVLPLNELKDKLEAM
                     EGVQFKQFNSITDYHSLMFDLGIIARRLRSASDRSKFYRLIEASLYGGISSAITRSLR
                     DYLLPENSGVRKAFQDMEAALRENRMTLEAIRVTQSDRDLFKHLISEATNYVAADYMR
                     HANERRVHLDKALEFRRELHTSRQQLAAEQYKHVDMARELAEHNGAEGDLEADYQAAS
                     DHLNLVQTALRQQEKIERYEADLDELQIRLEEQNEVVAEAIERQEENEARAEAAELEV
                     DELKSQLADYQQALDVQQTRAIQYNQAIAALNRAKELCHLPDLTADSAAEWLETFQAK
                     ELEATEKMLSLEQKMSMAQTAHSQFEQAYQLVVAINGPLARNEAWDVARELLREGVDQ
                     RHLAEQVQPLRMRLSELEQRLREQQEAERLLADFCKRQGKNFDIDELEALHQELEARI
                     ASLSDSVSNAREERMALRQEQEQLQSRIQSLMQRAPVWLAAQNSLNQLSEQCGEEFTS
                     SQDVTEYLQQLLEREREAIVERDEVGARKNAVDEEIERLSQPGGSEDQRLNALAERFG
                     GVLLSEIYDDVSLEDAPYFSALYGPSRHAIVVPDLSQVTEHLDGLTDCPEDLYLIEGD
                     PQSFDDSVFSVDELEKAVVVKIADRQWRYSRFPEVPLFGRAARESRIESLHAEREVLS
                     ERFATLSFDVQKTQRLHQAFSRFIGSHLAVVFESDPEAEIRQLNSRRVELERALSNHE
                     NDNQQQRIQFEQAKEGVTALNRILPRLNLLADDSLADRVDEIRERLDEAQEAARFVQQ
                     FGNQLAKLEPIVSVLQSDPEQFEQLKEDYAYSQQMQRDARQQAFALTEVVQRRAHFSY
                     SDSAEMLSGNSDLNEKLRERLEQAEAERTRAREALRGHAAQLSQYNQVLASLKSSYDT
                     KKELLNDLQRELQDIGVCADSGAEERARIRRDELHAQLSNNRSRRNQLEKALTFCEAE
                     MDNLTRKLRKLERDYFEMREQVVTAKAGWCAVMRMVKDNGVERRLHRRELAYLSADDL
                     RSMSDKALGALRLAVADNEHLRDVLRMSEDPKRPERKIQFFVAAYQHLRERIRQDIIR
                     TDDPVEAIEQMEIELSRLTEELTSREQKLVISSRSVANIIRKTIQREQNRIRMLNQGL
                     QNVSFGQVNSVRLNVNVRETHAMLLDVLSEQHEQHQDLFNSNRLTFSEALAKLYQRLN
                     PQIDMGQRTPQTIGEELLDYRNYLEMEVEVNRGSDGWLRAESGALSTGEAIGTGMSIL
                     VMVVQSWEDESRRLRGKDISPCRLLFLDEAARLDARSIATLFELCERLQMQLIIAAPE
                     NISPEKGTTYKLVRKVFQNTEHVHVVGLRGFAPQLPETLPGTDEAPSQAS"
     gene            complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JN001_002046"
     CDS             complement(4533..5237)
                     /gene="mukE"
                     /locus_tag="JN001_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415443.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukE"
                     /protein_id="HAY9053283.1"
                     /translation="MSSTNIEQVMPVKLAQALANPLFPALDSALRSGRHIGLDELDNH
                     AFLMDFQEYLEEFYARYNVELIRAPEGFFYLRPRSTTLIPRSVLSELDMMVGKILCYL
                     YLSPERLANEGIFTQQELYDELLTLADEAKLLKLVNNRSTGSDVDRQKLQEKVRSSLN
                     RLRRLGMVWFMGHDSSKFRITESVFRFGADVRAGDDPREAQRRLIRDGEAMPIENHLQ
                     LNDETEENQPDSGEEE"
     gene            complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JN001_002047"
     CDS             complement(5218..6540)
                     /gene="mukF"
                     /locus_tag="JN001_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partition protein MukF"
                     /protein_id="HAY9053284.1"
                     /translation="MSEFSQTVPELVAWARKNDFSISLQVDRLSFLLAVATLNGERLD
                     GEMSEGELVDAFRHVSDAFEQTSETIGVRANNAINDMVRQRLLNRFTSEQAEGNAIYR
                     LTPLGIGITDYYIRQREFSTLRLSMQLSIVAGELKRAADAAEEGGDEFHWHRNVYAPL
                     KYSVAEIFDSIDLTQRLMDEQQQQVKDDIAQLLNKDWRAAISSCELLLSETSGTLREL
                     QDTLEAAGDKLQANLLRIQDATMTHDDLHFVDRLVFDLQSKLDRIISWGQQSIDLWIG
                     YDRHVHKFIRTAIDMDKNRVFAQRLRQSVQTYFDEPWALTYANADRLLDMRDEEMALR
                     DEEVTGELPEDLEYEEFNEIREQLAAIIEEQLAVYKTRQVPLDLGLVVREYLSQYPRA
                     RHFDVARIVIDQAVRLGVAQADFTGLPAKWQPINDYGAKVQAHVIDKY"
     gene            complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JN001_002048"
     CDS             complement(6537..7322)
                     /gene="cmoM"
                     /locus_tag="JN001_002048"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine 5-oxyacetic acid(34)
                     methyltransferase CmoM"
                     /protein_id="HAY9053285.1"
                     /translation="MQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQ
                     KLRVLDAGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAA
                     QDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNM
                     VAGNFDYVQAGMPKKKKRTLSPDYPRDPAQVYLWLEEAGWQIMGKTGVRVFHDYLREK
                     HQQRDCYEALLELETRYCRQEPYITLGRYIHVTARKPQSKDKV"
     gene            7458..8237
                     /gene="elyC"
                     /locus_tag="JN001_002049"
     CDS             7458..8237
                     /gene="elyC"
                     /locus_tag="JN001_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706838.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope biogenesis factor ElyC"
                     /protein_id="HAY9053286.1"
                     /translation="MLFTLKKVIGNMLLPLPLMLLIIGAGLALLWFSRFQKTAKIFIS
                     IGWLALLLLSLQPVADRLLRPIESTYPTWNNSQKVDYIVVLGGGYTWNPQWAPSSNLI
                     NNSLPRLNEGIRLWRENPGSKLIFTGGVAKTNTVSTAEVGARVAQSLGVPREQIITLD
                     LPKDTEEEAAAVKQAIGDAPFLLVTSASHLPRAMIFFQQEGLNPLPAPANQLAIDSPL
                     NPWERAIPSPVWLMHSDRVGYETLGRIWQWLKGPSGEPRQE"
     gene            complement(8214..9107)
                     /locus_tag="JN001_002050"
     CDS             complement(8214..9107)
                     /locus_tag="JN001_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbJ family phosphotransferase"
                     /protein_id="HAY9053287.1"
                     /translation="MEQLRAELSHLLGEKLSRIECVNEKADTALWALYDSQGNPMPLM
                     ARSFSTPGKARQLAWKTTMLARSGTVRMPTIYGVMTHEEHPGPDVLLLERMRGVSVEA
                     PARTPERWEQLKDQIVEALLAWHRQDSRGCVGAVDNTQENFWPSWYRQHVEVLWTTLN
                     QFNNTGLTMQDKRILFRTRECLPALFEGFNDNCVLIHGNFCLRSMLKDSRSDQLLAMV
                     GPGLMLWAPREYELFRLMDNSLAEDLLWSYLQRAPVAESFIWRRWLYVLWDEVAQLVN
                     TGRFSRRNFDLASKSLLPWLA"
     gene            complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JN001_002051"
     CDS             complement(9261..10007)
                     /gene="kdsB"
                     /locus_tag="JN001_002051"
                     /EC_number="2.7.7.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-manno-octulosonate cytidylyltransferase"
                     /protein_id="HAY9053288.1"
                     /translation="MSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARESGAER
                     IIVATDHEDVARAVEAAGGEVCMTRADHQSGTERLAEVVEKCAFSDDTVIVNVQGDEP
                     MIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDAEGYALYFSRATI
                     PWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQASPLEHIEMLEQLRVLWYG
                     EKIHVAVAQEVPGTGVDTPEDLERVRAEMR"
     gene            complement(10004..10186)
                     /locus_tag="JN001_002052"
     CDS             complement(10004..10186)
                     /locus_tag="JN001_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YcaR"
                     /protein_id="HAY9053289.1"
                     /translation="MDHRLLEIIACPVCNGKLWYNQEKQELICKLDNLAFPLRDGIPV
                     LLETEARVLTADESKS"
     gene            complement(10238..11470)
                     /locus_tag="JN001_002053"
     CDS             complement(10238..11470)
                     /locus_tag="JN001_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix domain-containing
                     protein"
                     /protein_id="HAY9053290.1"
                     /translation="MSLPHLSLADARNLHLAAQGLLNKPRRRASLEDIPATISRMSLL
                     QIDTINIVARSPYLVLFSRLGNYPAQWLDESLARGELMEYWAHEACFMPRSDFRLIRH
                     RMLAPEKMGWKYKDAWMQEHEAEIAQLIQHIHDKGPVRSADFEHPRKGASGWWEWKPH
                     KRHLEGLFTAGKVMVIERRNFQRVYDLTHRVMPDWDDERDLVSQTEAEIIMLDNSARS
                     LGIFREQWLADYYRLKRPALAAWREARAEQQQIIAVHVEKLGNLWLHADLLPLLERAL
                     AGKLTATHSAVLSPFDPVVWDRKRAEQLFDFSYRLECYTPAPKRQYGYFVLPLLHRGQ
                     LVGRMDAKMHRQTGILEVISLWLQEGIKPTTMLQKGLRQAITDFASWQQATRVTLGRC
                     PQGLFTDCRTGWEIDPVA"
     gene            complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JN001_002054"
     CDS             complement(11507..12493)
                     /gene="lpxK"
                     /locus_tag="JN001_002054"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HAY9053291.1"
                     /translation="MIEKIWSGESPLWRLLLPLSWLYGLVSGAIRLCYKLKLKRAWRA
                     PVPVVVVGNLTAGGNGKTPVVVWLVEQLQQRGIRVGVVSRGYGSKAESYPLLLSADTT
                     TAQAGDEPVLIYQRTDAPVAVSPVRSDAVKAILAQHPDVQIIVTDDGLQHYRLARDVE
                     IVVIDGVRRFGNGWWLPAGPMRERAGRLKSVDAVIVNGGVPRSGEIPMHLLPGQAVNL
                     RTGTRCDVAQLEHVVAMAGIGHPPRFFATLKMCGVQPEKCVPLADHQSLNHADVSALV
                     SAEQTLVMTEKDAVKCRAFAEENWWYLPVDAQLSGDEPAKLLTQLTSLASGN"
     gene            complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JN001_002055"
     CDS             complement(12490..14238)
                     /gene="msbA"
                     /locus_tag="JN001_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A ABC transporter ATP-binding
                     protein/permease MsbA"
                     /protein_id="HAY9053292.1"
                     /translation="MHNDKDLSTWQTFRRLWPTIAPFKAGLIVAGVALILNAASDTFM
                     LSLLKPLLDDGFGKTDRSVLVWMPLVVIGLMILRGITSYVSSYCISWVSGKVVMTMRR
                     RLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMM
                     FYYSWQLSIILIVLAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVL
                     IFGGQEVETKRFDKVSNRMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVM
                     DSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFTILDSEQEKDEGKRV
                     IERATGDVEFRNVTFTYPGRDVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRF
                     YDIDEGEILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIAYARTEQYSREQI
                     EEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIAIARALLRDSPILILDEAT
                     SALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEIVVVEDGVIVERGTHNDLL
                     EHRGVYAQLHKMQFGQ"
     gene            complement(14379..16547)
                     /locus_tag="JN001_002056"
     CDS             complement(14379..16547)
                     /locus_tag="JN001_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC family protein"
                     /protein_id="HAY9053293.1"
                     /translation="MKITTVGVCIICGIFPLLILPQLPGTLTLAFLTLFACVLAFIPV
                     KTVRYIALTLLFFVWGILSAKQILWAGETLTGATQDAIVEITATDGMTTHYGQITHLQ
                     GRRIFPAPGLVLYGEYLPQAVCAGQQWSMKLKVRAVHGQLNDGGFDSQRYAIAQHQPL
                     IGRFLQASVIEPNCSLRAQYLASLQTTLQPYMWNAVILGLGMGERLSVPKEIKNIMRD
                     TGTAHLMAISGLHIAFAALLAAGLIRGGQVFLPGRWIHWQMPLIGGICCAAFYAWLTG
                     MQPPALRTVVALATWGMLKLSGRQWSGWDVWICCLAAILLMDPVAILSQSLWLSAAAV
                     AALIFWYQWFPCPEWQLPPVLRAVVSLIHLQLGITLLLMPVQIVIFHGISLTSFIANL
                     LAIPLVTFITVPLILAAMVVHLSGPLILEQGLWFLADRSLALLFWGLKSLQEGWINIA
                     ERWQWLSFSPWFLLVVWRLNAWRTLPAMCVAVGLLMCWPLWQKPRPDEWQVYMLDVGQ
                     GLAMVIARNGKAILYDTGLAWPEGDSGQQLIIPWLHWHNLEPEGVILSHEHLDHRGGL
                     DSILHTWPMLWIRSPLNWEHHQPCVRGEAWQWQGLRFSVHWPLQASNDKGNNHSCVVK
                     VYDGTNSILLTGDIEVPAEQKMLSRYWQQVQTTLLQVPHHGSNTSSSLPLIQRVNGKV
                     ALASASRYNAITHGDCPLIKLSIAINSKDINGLILHIRVK"
     gene            complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JN001_002057"
     CDS             complement(16754..17038)
                     /gene="ihfB"
                     /locus_tag="JN001_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HAY9053294.1"
                     /translation="MTKSELIERLATQQSHIPAKTVEDAVKEMLEHMASTLAQGERIE
                     IRGFGSFSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG"
     gene            complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JN001_002058"
     CDS             complement(17198..18871)
                     /gene="rpsA"
                     /locus_tag="JN001_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HAY9053295.1"
                     /translation="MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKS
                     ESAIPAEQFKNAQGELEIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAY
                     EDAETVTGVINGKVKGGFTVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLD
                     QKRNNVVVSRRAVIESENSAERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLL
                     HITDMAWKRVKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPE
                     GTKLTGRVTNLTDYGCFVEIEEGVEGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLD
                     IDEERRRISLGLKQCKANPWQQFAETHNKGDRVEGKIKSITDFGIFIGLDGGIDGLVH
                     LSDISWNVAGEEAVREYKKGDEIAAVVLQVDAERERISLGVKQLAEDPFNNWVALNKK
                     GAIVTGKVTAVDAKGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGV
                     DRKNRAISLSVRAKDEADEKDAIATVNKQEDANFSNNAMAEAFKAAKGE"
     gene            complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JN001_002059"
     CDS             complement(18982..19665)
                     /gene="cmk"
                     /locus_tag="JN001_002059"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000125007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HAY9053296.1"
                     /translation="MTAIAPVITIDGPSGAGKGTLCKAMAEALQWHLLDSGAIYRVLA
                     LAALHHHVDVASEDALVPLASHLDVRFVSTNGNLEVILEGEDVSGEIRTQEVANAASQ
                     VATFPRVREALLRRQRAFRELPGLIADGRDMGTVVFPDAPVKIFLDASSEERAHRRML
                     QLQEKGFSVNFERLLAEIKERDDRDRNRAVAPLVPAADALVLDSTTLSIEQVIEKALQ
                     YARQKLALA"
     gene            complement(19838..20601)
                     /locus_tag="JN001_002060"
                     /pseudo
     CDS             complement(19838..20601)
                     /locus_tag="JN001_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706828.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
BASE COUNT         4987 a         5723 c         5034 g         4976 t
ORIGIN      
        1 tatgtgccat ttttttagtg cagaaacgga gttttcggaa aaagaaaagg cggcattgct
       61 gccgccttaa ttttaactcg cctgagaagg cgcttcgtca gttcctggaa gcgtttcagg
      121 gagttgcggc gcaaatcctc gcaggccgac gacatgaaca tgttcggtat tctggaagac
      181 tttacgcacc agtttatagg tggtgccttt ctccgggctg atattttccg gcgctgcgat
      241 gatgagctgc atttgcaaac gctcacacaa ttcaaacagc gtggcgatag aacgagcatc
      301 cagtcgcgct gcttcatcga ggaacagcag acggcaagga gagatatctt taccgcgcag
      361 gcggcgagat tcatcttccc agctttgtac caccatcacc agaatcgaca taccggtacc
      421 aatcgcctca ccggtcgaca atgcaccaga ctctgcgcgc aaccaaccat cggaaccacg
      481 gttaacctca acttccattt ccagatagtt gcggtaatcc agcagttctt cgccaatggt
      541 ctgcggcgtg cgctgcccca tatcaatctg cggattaaga cgctgataca atttcgccaa
      601 cgcttccgag aaggtcagac ggttgctgtt aaacagatcc tgatgctgct cgtgctgttc
      661 agagagcaca tccagcagca tggcgtgcgt ttcacgcacg ttcacgttga ggcgcacgct
      721 gttcacctga ccaaacgata cgttctgcaa cccctggttg agcatacgga tacggttctg
      781 ctcgcgctga atggttttgc gaatgatgtt cgccacgctg cgggaactga tcaccagttt
      841 ctgttcacgg gaggttaatt cttcggtcag acggctaagt tcgatctcca tctgttcgat
      901 agcttccacc ggatcatcgg tacgaataat atcctgacga atacgttcac gcagatgctg
      961 ataagccgcc acgaagaact gaattttacg ctccggacgt ttcggatctt ccgacatgcg
     1021 cagcacgtcg cgcagatgtt cgttatccgc caccgccaga cgcagcgcac ccaatgcctt
     1081 atccgacata gagcgcaaat catcagcgga gagataagcc agctcacgac ggtgtaagcg
     1141 gcgctcaacg ccgttatctt tcaccatgcg catcaccgca caccagcccg ctttggcggt
     1201 cactacctgc tcgcgcatct caaagtaatc ccgctccagc ttgcgcagtt tgcgggtcag
     1261 gttgtccatc tccgcttcgc agaaggtaag cgctttttcc agttgattgc ggcgtgaacg
     1321 gttattgctc agttgcgcat gcagctcgtc acggcgaata cgcgcccgct cttctgcccc
     1381 gctatcagca cacacgccga tatcctgcaa ttcacgttgc agatcgttga gtagctcttt
     1441 tttggtgtcg taagaacttt tcagcgaagc cagcacctgg ttgtactgac tcaactgcgc
     1501 tgcgtgaccg cgcaacgctt cgcgagcgcg ggtacgctcc gcttccgcct gttccagacg
     1561 ttcacgcagt ttttcgttga gatcgctgtt accgctaagc atttctgccg agtcagagta
     1621 gctaaagtgc gcacgacgct gcaccacttc cgtcagggca aacgcctgct gacgggcatc
     1681 gcgctgcatc tgttgagagt acgcgtaatc ttcttttaac tgttcgaact gttccgggtc
     1741 gctctgcaat accgaaacga tcggttccag tttcgccagt tgattgccaa actgctgaac
     1801 aaaacgcgcg gcttcctggg cttcatccag acgttcgcgg atttcatcga cgcgatccgc
     1861 caggctatca tcagccaaca ggttgagacg cggcagaatg cggttcagcg ccgtaacgcc
     1921 ctctttcgcc tgctcaaact gaatacgctg ctgctggtta tcattttcat gattacttaa
     1981 cgcccgctcc agttcgacgc gacggctgtt cagttgacgg atttctgctt ccgggtcaga
     2041 ctcaaacaca accgccagat gactgccgat aaagcggctg aacgcctgat gcagacgctg
     2101 agttttctgt acatcaaagg agagcgtggc gaagcgttcg gaaagcactt cacgctcggc
     2161 atggaggctt tcaatacggc tttcacgcgc agcacgacca aacagcggca cttccgggaa
     2221 acgtgaataa cgccactgac gatcggcgat tttcaccact accgcttttt ccagctcatc
     2281 aacgctgaac acgctgtcat cgaatgactg cggatctcct tcgatcagat agagatcttc
     2341 cgggcaatcg gtcaagccat ctaggtgttc agttacctgt gacagatctg gcaccacgat
     2401 ggcgtggcgt gacgggccat acagcgctga gaagtacggc gcatcttcca ggctaacgtc
     2461 gtcataaatt tctgacagca gcacaccacc aaaacgctcc gccagcgcgt tcagacgctg
     2521 atcttcagag ccgccaggct ggcttaaacg ttcgatctct tcatcgacgg cgtttttgcg
     2581 cgcgcccact tcatcgcgtt caacaatcgc ctctcgctca cgctccagca actgttgcag
     2641 atattcggtg acgtcctggc tggaggtaaa ctcttcgccg cactgttcgc tcaactggtt
     2701 gagactgttt tgcgctgcca gccaaaccgg cgcacgctgc atcaaactct gaatgcgaga
     2761 ctgcagctgt tcctgctcct ggcgcagtgc catgcgctct tcacgggcgt tagacacgct
     2821 atcggaaaga gaggcaatgc gtgcttccag ttcctgatgc agggcttcca gttcgtcgat
     2881 atcaaaattc ttgccctgac gtttgcagaa atctgccagc agacgctcag cttcttgctg
     2941 ctcgcgtaga cgctgttcca gttcgcttaa tcgcatccgc agcggctgaa cctgctctgc
     3001 caggtgacgc tgatcgaccc cttcgcgcaa tagttcgcga gcgacatccc acgcctcgtt
     3061 acgcgccagt gggccgttga ttgccaccac cagctgataa gcctgctcaa actggctgtg
     3121 cgcggtttgc gccatgctca ttttctgctc aagagagagc attttttcag tcgcttccag
     3181 ctctttcgcc tggaaggttt ccagccattc ggcggcgctg tcggcggtta agtccggcag
     3241 atggcacagt tctttggcac gattaagcgc agcaatcgcc tggttatact ggatcgcgcg
     3301 cgtttgctgg acgtccagcg cctgctggta gtcagcaagc tggcttttca gctcgtccac
     3361 ttccagttcg gcagcttccg cgcgagcctc gttctcttcc tggcgttcga tggcttctgc
     3421 caccacttcg ttttgctctt ccagacggat ctgcagctca tcgagatccg cttcgtagcg
     3481 ttcgatcttc tcctgctgac gcagtgcggt ttgcaccagg ttcaggtgat cgctggccgc
     3541 ctgataatcc gcttccagat cgccttcggc accgttgtgc tctgccagct cacgcgccat
     3601 atcgacgtgt ttgtactgct cagccgccag ttgctgacgc gaagtatgta actcgcgacg
     3661 aaactccagg gctttgtcga gatggacacg gcgctcgttg gcgtgacgca tgtagtccgc
     3721 cgccacgtag ttggtagctt cgctgatcag atgcttaaac aggtcacggt ccgactgggt
     3781 gacacgaatc gcttccagcg tcatgcggtt ttcacgcagc gccgcttcca tgtcctggaa
     3841 cgctttacgc acgccgctgt tttccggcaa cagatagtcg cgcagagaac gggtaatggc
     3901 actggagatc ccgccataca gcgaagcttc gatcagacga tagaatttgc tacggtcaga
     3961 tgcggagcgc agacgacgcg cgatgatgcc cagatcgaac atcagcgagt ggtaatcggt
     4021 aatggagttg aactgtttaa actgcacgcc ttccatcgcc tcgagcttgt ctttcagctc
     4081 gttaagcggc agcacgcgcg cctggcgttc gttcagggtt tcggtcacca gctgtgtcgg
     4141 ctgcaccgac atcggcagtc cctgaatggc aaatggtttg atatccactt tacgatcgcg
     4201 tccggcaacc tgttgcagac gcacaccgac caccacgcgc tggtggcgcg agttaatggt
     4261 gtcgagcatc gaataacaga cacccgcttt cagcttaccg tgcagacctt tatcgcgcga
     4321 accgctggtg gccccggctt ccgtagtgtt acggaaatgc agcagggtca ggtcggggat
     4381 cagcgccgta acgaacgccg ccatggtggt ggatttaccc gccccgttac cgccagaaag
     4441 cgtcgtgacc agctcgtcaa ggtcaaaagt tcgggcaaaa aagccgttcc agttaatcag
     4501 cgtcagtgag cgaaatttac cgcgttcaat cattattctt cctctccgct atctggctga
     4561 ttctcttcgg tttcatcgtt gagttgcaga tgattttcaa tcggcattgc ttcgccatca
     4621 cgaatcaggc gacgctgtgc ttcacgggga tcgtcgccag cacgcacatc ggctccgaag
     4681 cggaacaccg attcggtaat gcgaaacttg ctgctgtcgt ggcccataaa ccacaccatg
     4741 cctaaacgac gcagacggtt gagcgaagaa cgtactttct cctgcaactt ctgacggtca
     4801 acgtctgaac cggttgaacg gttgttcacc agtttcagca gttttgcttc atcggccagg
     4861 gtgagcagtt cgtcgtacag ttcctgctgg gtgaaaatcc cctcattcgc cagccgttcc
     4921 gggctgagat agagataaca gaggattttc ccgaccatca tatccagttc cgacaagacg
     4981 gaacgcggga taagagtggt ggaacgtggg cgtaaataga agaacccttc cggtgcgcga
     5041 ataagctcaa cgttataacg cgcgtaaaac tcttccagat attcctgaaa atccatcagg
     5101 aatgcatgat tatccagttc gtcgaggcca atatggcggc ctgaacgtaa ggcgctgtcc
     5161 agcgccggaa ataacggatt cgccagcgcc tgcgccagct taaccggcat cacttgttca
     5221 atatttgtcg atgacatgcg cctgtacctt ggctccgtaa tcattaatcg gctgccattt
     5281 cgctggcagt ccggtgaaat ctgcttgcgc tacgccaaga cgtaccgcct gatcaataac
     5341 aatacgcgca acgtcaaagt gacgtgcacg cggatactgt gacagatatt cgcgtaccac
     5401 cagaccaaga tccagcggca cttgtctggt tttgtacacg gcaagttgtt cttcgatgat
     5461 cgccgccagc tgttcgcgga tctcgttaaa ctcttcgtat tccagatcct caggaagttc
     5521 cccagtcact tcttcatcgc gcagtgccat ctcttcgtca cgcatatcca gcagacgatc
     5581 ggcattggca taagttagcg cccacggctc atcaaaatag gtttgtaccg actgacgtaa
     5641 ccgctgagca aagacgcggt ttttatccat atcgatcgcg gtacgaataa atttgtgtac
     5701 gtggcggtcg tagccaatcc acaagtcgat ggattgctgg ccccaactga taatacgatc
     5761 gagtttgctc tgcagatcga acaccagacg atcgacgaaa tgcagatcgt catgggtcat
     5821 cgtcgcatcc tgaatgcgca acagattagc ctgcaatttg tcgcctgccg cttccagcgt
     5881 atcctgcaat tcacgcagcg ttccggaagt ttccgaaagc aacaattcac agctggaaat
     5941 cgccgcccgc cagtctttgt tcagcaactg ggcgatatcg tccttcacct gctgctgctg
     6001 ttcgtccatc agacgttgcg tcaggtcgat actgtcgaaa atttctgcta ccgaatattt
     6061 cagtggcgca tagacattac ggtgccagtg aaattcatca ccgccctctt cggcggcatc
     6121 tgctgcgcgt ttgagctcac ccgccacaat cgacaactgc atagaaagac gcagcgtaga
     6181 aaactcgcgc tgacggatgt agtagtcagt aatgccgatg ccgagcggcg tcagacggta
     6241 aattgcgttc ccttccgcct gctcgctggt aaagcggttc agcagacgtt gacgcaccat
     6301 gtcgttgatc gcgttattgg cgcgcacgcc gatggtttcg ctggtttgct caaacgcatc
     6361 actcacatgg cggaatgcat ccaccagctc gccttcactc atctcaccat ccagacgctc
     6421 gccgttcagc gtggcaaccg ccagcagaaa agagagtcgg tctacctgca gcgagatgga
     6481 gaagtcattt tttctggccc aggcaaccag ttcggggact gtctgggaaa attcactcat
     6541 actttatcct tgctctgcgg tttgcgcgcg gtgacatgaa tataacgccc cagggtaata
     6601 tacggttcct gacggcaata acgcgtttct aattcaagta atgcttcata gcagtcgcgc
     6661 tgctggtgct tctcgcgcag ataatcatga aacacgcgaa cgcctgtctt acccataatt
     6721 tgccaaccag cttcttccag ccacagataa acctgcgccg ggtcgcgtgg ataatctggc
     6781 gaaagcgtcc gttttttctt tttcggcatt cccgcctgca cgtaatcaaa attcccggcg
     6841 accatgttat gcatcaacaa accatgcgca ttgtagaaca ttaacgacaa cacgccgcct
     6901 ggacgcaaca ctgaccacag ggtctgcaat acactgcggg gatcggccac ccactcgagc
     6961 accgcatgga acaatatcag atcaacgggc gtttccaaat gcgaagcaac atcctgagcg
     7021 gcgcaatgta taaattgcat gttgtcgctc acaccttttg cttctgccgc ctgttttgcg
     7081 cggtcgatca tctgcgcaga aagatcgcat aaaatgacct gatgcccacg ctcggccatt
     7141 ttgattgcgg tctgcccttc tccaccgcca gcatccagca cacgcagttt ttgcgggccc
     7201 atttccgcca gcacgcgatc gagatcctgc cacagaatag cctgtcgaag ctgccctttg
     7261 gtggtgccgt aaatgttacg ggaaaacttt tccgcaatat catcaaaatt gcgatcctgc
     7321 attgctttct ccaccggttg gctaagacgt tttctgataa agacgctatt ttgtcacagc
     7381 cacggcgaga atgaacccgt ctggtgtaat atcgctggcg atcccttgct atatggttaa
     7441 aaaaggaacc agaaaggatg ctttttacac tgaaaaaagt gattggcaat atgttgctgc
     7501 cacttccgct gatgttgtta attattggcg ctggcctggc gctgctgtgg tttagccgtt
     7561 ttcaaaaaac cgcgaagatt tttattagca ttgggtggct ggcactcttg ttattgagtt
     7621 tgcaaccggt agccgaccgc ctgctgcgtc ccatcgaaag cacctatccg acatggaata
     7681 attcgcaaaa agtggactat atcgtggtgc tcggaggtgg ttatacctgg aacccgcagt
     7741 gggcaccgag ctctaattta atcaataaca gtctgccacg cctgaatgaa ggtattcgct
     7801 tatggcgcga aaatccggga tcaaaactga tcttcacggg aggcgtagca aaaaccaata
     7861 cggtgagtac agcggaagta ggtgccagag ttgcgcaatc gctgggcgtg ccgcgcgagc
     7921 aaattatcac cctggatttg ccaaaagata ccgaagaaga agctgcggca gtgaaacagg
     7981 cgattggtga cgcccctttc ctgctggtga cctccgcatc acatctgccg cgggcgatga
     8041 tcttttttca gcaggaaggg ttaaatcctc taccagcccc ggcgaatcag ttggccatcg
     8101 actcgccgct taatccgtgg gaacgggcaa tcccttctcc ggtctggctg atgcatagcg
     8161 atcgtgttgg ctatgaaacg cttggccgca tctggcagtg gctgaaaggt ccgtcaggcg
     8221 agccacggca agagtgattt tgatgccaga tcgaagttgc gccgactaaa tcgtccggta
     8281 ttaaccagtt gcgcaacttc atcccataac acatacaacc aacgccgcca gatgaacgac
     8341 tccgccactg gcgcgcgttg caggtaactc cagagcaaat cttccgccag agaattatcc
     8401 attagtcgga acagttcgta ttctcgcggt gcccaaagca ttagtcccgg cccgaccatc
     8461 gccagtaact gatcgctgcg cgaatctttc agcatgctgc gtaaacagaa gttaccgtga
     8521 atcaacacac aattgtcgtt aaagccttca aataatgccg ggagacattc gcgagtgcga
     8581 aacaggatcc gcttatcctg catcgtcaga ccggtgttat tgaactgatt gagcgtggtc
     8641 catagcactt caacatgttg ccggtaccat gagggccaga aattttcctg agtattgtcg
     8701 accgcgccga cgcaaccgcg actgtcctga cggtgccatg ccagtaaggc ttcaacgatt
     8761 tggtctttga gctgttccca gcgttctggt gttcgggctg gtgcctccac cgaaacacca
     8821 cgcatccgct ccagtagcag gacatcaggg ccggggtgtt cttcatgcgt catcacacca
     8881 taaatagtcg gcatacggac agtcccactt cttgccagca tggtggtttt ccatgccagt
     8941 tgtcgggctt ttccgggcgt actaaagctt cttgccatta acggcattgg gtttccctgg
     9001 ctgtcataca aagcccacaa cgccgtatcc gctttttcat tgacgcactc aatacgactg
     9061 agtttttcgc ccagtaaatg gcttaattcg gcacgcagct gttccattca gattaccctc
     9121 ataaaagcta ctgctttcat aatgagcgcc aatataaaag atgtcacctg aatgagatca
     9181 attgttgaaa agaaaaattg aggaaaatcg taacggtacg acactcctcc caaaattggc
     9241 tgaagtgtcg tgaagtgaaa ttagcgcatt tcagcgcgaa cgcgctcaag atcttcaggg
     9301 gtatccacac ctgtgccagg aacttcctga gcaacagcaa catggatttt ttcgccgtac
     9361 cacagaacac gaagctgctc taacatttcg atgtgttcta acggacttgc ctgccagttg
     9421 acgtaacgac ggataaagcc tgcacggtag ccataaatgc caagatgacg caggaagtta
     9481 tcgccaacgg tttcaaggcc ttctgcaaaa cgatcacgat cccaaggaat ggtggcgcgt
     9541 gagaagtaca gtgcataccc ttcagcgtcg agaaccactt tcaccgcatt cgggttaaac
     9601 gcttcttccg cattgtggat tggcaccgcc agagtcgcca tacccacctg acgctgagcg
     9661 aggttatcag caacctgacg aatgattgtc gcagggatca tcggttcatc accctgcaca
     9721 ttaacgatca ccgtgtcgtc gctgaatgcg catttttcga caacttccgc cagacgttct
     9781 gttcctgact gatgatcggc gcgcgtcata catacttcac cgccagcggc ttcaacggcg
     9841 cgggcaacat cctcatgatc ggttgccacg atgatgcgct cggcacctga ttcacgcgcg
     9901 cgttcaagaa catgaacaat catgggtttg ccgttaatat caaccaatgg tttaccgggc
     9961 agacgcgtgg acgcgtagcg cgcgggaata atgaccacaa aactcatgat ttactctcat
    10021 cagcagtcag cacgcgggct tccgtttcca gcaacactgg aatgccatcg cggagcggga
    10081 aagccaggtt atccagtttg caaataagct cttgtttttc ctggttatac caaagttttc
    10141 cgttgcaaac cgggcaggca atgatttcaa gcaaacgatg atccatagtt cctccagatg
    10201 gatcgggtta tgaatgcata aatcttatca taatcattta tgcgacgggg tctatttccc
    10261 agccagtgcg gcaatcagta aagagacctt gcgggcagcg tcctaatgtc acccgcgttg
    10321 cctgctgcca gctcgcgaaa tcagtaatcg cctgacgtaa ccctttttgc agcattgtcg
    10381 ttggtttaat gccttcctgt aaccacagag agataacttc aaggatgcct gtctggcgat
    10441 gcattttggc atccattcgc ccaactaatt gcccacgatg taataatggc agaacaaaat
    10501 agccatactg gcgtttcggc gctggggtat agcactccag ccggtagcta aaatcaaaaa
    10561 gctgctctgc gcgtttgcga tcccagacaa caggatcaaa aggcgaaagt accgcgctgt
    10621 gcgttgcagt gagctttccg gccagcgcac gctcgagtag cggcagcaaa tcagcatgca
    10681 gccaaagatt gcccaatttt tcaacatgca cagcaatgat ttgctgctgt tcagccctcg
    10741 cttcgcgcca cgccgccagt gccggacgtt tcagccgata gtaatctgcc agccactgtt
    10801 cgcggaatat tcccaggcta cgcgcactgt tatccagcat gatgatttct gcttctgttt
    10861 gcgaaacgag atcgcgctca tcatcccagt caggcatgac acggtgggtt aaatcataaa
    10921 cgcgctggaa gttgcgccgt tcaatcacca tcacctttcc ggcagtaaat aaaccttcca
    10981 gatgccgttt atgcggtttc cattcccacc agccgcttgc acctttacga ggatgctcaa
    11041 aatcggctga acgtaccggc cccttatcat gaatatgctg aattaactgt gcaatttccg
    11101 cctcatgttc ctgcatccag gcgtctttgt atttccagcc cattttttca ggtgccagca
    11161 tgcggtggcg aataagacga aagtcgctac gcggcataaa gcaggcttca tgcgcccagt
    11221 attccattaa ttcgccacgc gccagagact catccagcca ctgggcagga taatttccca
    11281 gacgactgaa aagcaccaga tatggactac gggcaacaat attgatggta tcgatttgca
    11341 gcaaggacat gcgggagatc gttgccggaa tatcctccaa cgacgctcga cggcggggtt
    11401 tgtttaacag gccttgtgcg gcaaggtgaa gattacgcgc atcagcaagg gagaggtgcg
    11461 gcagcgacat tcatgactcc atcaatcgaa cgctgccgcg gcgtaactag ttgccagaag
    11521 ccagcgaggt tagttgcgta agcagtttcg ctggttcatc acctgaaagc tgtgcgtcta
    11581 caggcaaata ccaccaattt tcttctgcaa aggcccggca tttcaccgca tctttttcag
    11641 tcattaccag cgtttgctcg gcgcttacca acgcactgac atccgcatgg ttcaaagact
    11701 gatgatcggc cagcggtaca catttttccg gttgtacgcc acacatcttc agcgtggcaa
    11761 aaaagcgcgg cggatgccca atccccgcca tcgccactac atgttcaagc tgagcaacgt
    11821 cacaacgcgt accggtacgt aaattcaccg cctgacccgg cagcagatgc atgggaattt
    11881 caccgctgcg agggacaccg ccgttgacga ttaccgcatc aaccgacttt aagcgccccg
    11941 ctcgctcacg cattggcccc gccggcaacc accagccatt gccaaagcga cgcacaccat
    12001 caataacgac aatttccaca tcacgcgcca gacggtaatg ctgtaaaccg tcgtcggtta
    12061 cgatgatctg cacatcaggg tgttgcgcca gaatggcttt taccgcatca gaacgaacgg
    12121 gagaaaccgc aacaggcgca tcagtgcgtt gataaatcaa cacaggttca tcacccgcct
    12181 gtgctgttgt ggtatctgcc gacaataaca gcggataaga ttcagcctta ctaccatatc
    12241 cccgcgatac gacccccacg cgaataccgc gctgttgcaa ctgttccacc agccagacaa
    12301 cgaccggggt ttttccgttg ccgcctgcgg tgagattacc aaccacgaca accggtacgg
    12361 gggcacgcca ggcgcgcttc agttttagtt tatagcaaag acggatcgcg ccactcacca
    12421 ggccatacaa ccaggagagt ggcagcaata gccgccacaa aggggattca ccagaccaga
    12481 ttttttcgat cattggccaa actgcatttt gtgaagttgc gcgtaaacgc cgcggtgctc
    12541 aagcaaatcg ttatgcgtac cgcgttccac aatgacacca tcctcgacga ccacgatttc
    12601 gtctgccttt tcaatggtag acaagcggtg ggcaatcacc agagaggtac ggtttttctg
    12661 caactcatcc agtgccgcct gaatcgcacg ttcggattcg gtatccagag ccgaggtagc
    12721 ttcatccaga atcagaatcg ggctatcacg cagcaaggct cgagcgatag caatacgctg
    12781 acgctgaccg ccagagagca gcacgccgtt ttcaccaatc actgtatcga gaccgttatc
    12841 catcttattg atgaagtcca tggcgtaggc catacgcgcc gcttcttcaa tttgctcacg
    12901 gctgtactgt tcagtccgtg cgtaagcaat gttgttagca accgtatcgt taaacagatg
    12961 gacattctgc gacaccagag caacctggtt acgtaacgac gccagggtat actcgcgcag
    13021 atcgtgacca tccatcagga tttcgccttc atcaatatcg taaaaacgag tgatcaggct
    13081 ggcgatggtt gatttacctg aaccagagcg tccaaccaga gcaaccgtct tccctgccgg
    13141 aattttcagg ttgatgttac gcaatgcagg tacgtcacgt cccggataag taaaggtgac
    13201 attgcggaat tccacgtcgc cagtcgcacg ctcgatcacg cgcttacctt cgtctttctc
    13261 ctgctcactg tccagaatgg taaacagcgt ctgacaagcc gccataccgc gctggaactg
    13321 ggcgttaacg ttggtcagtg atttcagcgg acgcatcagt gcaatcattg aagagaaaac
    13381 aacggtaatc gtaccagcag tcaggctatc catgacactt gggaagctcg ccgcatacag
    13441 aacaaacgcc agcgccaaag aggcgatcag ctgaatgatc ggatcagaga tggaagaggc
    13501 tgaaaccatt ttcatcccct gaagacgcat tcggttgctg actttatcaa agcgtttcgt
    13561 ttccacttcc tgaccaccga aaatcaatac ttctttgtgg cccttcagca tttgttcggc
    13621 gctggtggtc acctgcccca tggtgttctg catgttttta ctgatgttgc gaaaacgctt
    13681 cgatactacg cgaatcgcaa tcgaaacaat cggtgccagc acaatcaaaa tgatcgacag
    13741 ttgccaactg taatagaaca tcatgatgaa caggccgatg attgacgcac cttcacgcac
    13801 aaccgttatc agtgcgccgg aagaagaaga agcaacctgt tcggaatcgt aggtaatacg
    13861 tgacaacagc gtccccgttg actgtttgtc aaaaaatgaa accggcattc ccatcatgtg
    13921 accaaacagg cggcgacgca tggtcattac cacctttcct gatacccagg agatacagta
    13981 gctggagaca tagctggtga taccacgtaa aatcatcagc ccgatcacca ccagcggcat
    14041 ccacaccagc acggagcgat ctgttttacc aaagccatca tcaagaagtg gcttaaggag
    14101 cgataacatg aaggtatcgc tggctgcgtt gaggattaac gctacgcccg ccacgatcag
    14161 acccgcttta aaaggcgcaa tggttggcca cagtcggcgg aacgtctgcc acgtagagag
    14221 atctttgtcg ttatgcattc aaaaaaccag catttgttga aatagccgca tattctaccc
    14281 gttatccact ggcacgccaa accactgatg ataccaacga ggtaaaattt gctctctgag
    14341 gctgctaatc cgccagcctt gcgctgaaaa attgaccgtc acttgaccct gatgtggagt
    14401 atcaagccat tgatatcctt gctgttgata gcgatgctta actttattag agggcaatcg
    14461 ccatgcgtta tagcgttata gcgcgatgcc gatgcgagtg ccacttttcc attcactcgc
    14521 tgaattaatg gcaacgatga tgaggtatta ctgccatggt gaggtacctg aagcaatgtt
    14581 gtctgcactt gctgccagta acggcttagc atcttttgtt cagcggggac ttcaatatca
    14641 ccggttagaa gaatgctatt cgtcccgtca taaaccttaa ccacacagga atggttattt
    14701 cctttatcgt tgctagcttg taaaggccag tgcacgctga aacgcaatcc ttgccattgc
    14761 cacgcttcgc cacgcacaca gggctgatga tgttcccagt ttaacggact tctgatccat
    14821 aacatcggcc atgtgtgcaa tattgagtcc agccctcccc ggtgatccag atgttcatga
    14881 ctcagaataa cgccttccgg ttcaagatta tgccagtgga gccaggggat aatcagttgt
    14941 tgcccactat ccccttcggg ccaggccagt cctgtgtcat agagaatcgc tttgccgttt
    15001 ctggctatca ccattgccag cccttgcccg acatcaagca tgtacacctg ccactcgtca
    15061 ggtcgaggtt tttgccacag cggccagcac atcagcaagc ctacagccac acacattgct
    15121 ggcaacgttc gccaggcgtt taatcgccat accaccagta agaaccatgg ggaaaatgat
    15181 agccattgcc aacgttcagc aatgttgatc cacccttctt gcaaactctt taacccccag
    15241 aaaagtaaag ccaaagaccg gtcggcaaga aaccataacc cttgctccag gattaacggc
    15301 ccgcttaaat gcacaaccat cgcggcgagg atcaacggaa ccgtgataaa tgtcaccaag
    15361 ggaattgcta atagatttgc aataaacgag gtcagactaa tgccatgaaa tatgacgatt
    15421 tgcacaggca taagcaggag tgtgattccc agttgcaaat gaatgaggga aacaactgca
    15481 cgcaataccg gcggcagttg ccactcagga cagggaaacc actggtacca aaaaatcagt
    15541 gccgcgaccg cagcggcaga gagccataaa ctttgcgaga gaatggcaac aggatccatc
    15601 agcaaaattg ccgccagaca acatatccat acatcccagc cactccactg tcgcccactt
    15661 aacttaagca ttccccacgt agcaagcgcc accacggtac gcaatgcagg aggttgcatt
    15721 cccgtcaacc aggcataaaa agcagcacag cagattccac caattaatgg catttgccag
    15781 tggatccagc gcccaggcag aaaaacttgc ccaccgcgaa tgagtccggc agccagcaac
    15841 gccgcaaaag cgatgtgcaa tcccgatatc gccattaaat gcgccgttcc agtatcacgc
    15901 atgatatttt tgatttcttt ggggacggat aaccgttccc ccatacctaa accaagaata
    15961 accgcattcc acatataggg ttgcagcgtt gtttgtagtg acgccagata ctgtgcacgc
    16021 aggctacaat tcggttcaat gacacttgcc tgcagaaagc ggccgatgag cggctgatgc
    16081 tgggcaatgg cataacgctg gctatcaaag ccgccatcat taagttggcc atgaactgca
    16141 cgaactttga gtttcattga ccattgttgt ccagcacaaa ccgcttgcgg aagatattcg
    16201 ccatacagca caagacctgg cgcagggaat atacgtcgac cttgtagatg agtaatttga
    16261 ccgtaatgag tggtcatgcc gtcagttgca gtgatctcaa caattgcatc ctgcgtcgcg
    16321 ccagttaagg tttctcctgc ccacaaaatt tgctttgctg ataatatgcc ccaaacgaaa
    16381 aacagcaacg tcagcgcgat ataacggacg gttttaacag ggataaatgc cagtacgcag
    16441 gcgaagagag tcagaaacgc aagggttaat gtcccaggca attggggcaa aatcagcaac
    16501 ggaaaaattc cgcaaattat gcatacgccg actgtcgtta ttttcatgca cccctccctg
    16561 tttatggaaa gtgtgcaact ttgttgagcg gttgtctggt gggaattttg cgttccccga
    16621 ggcacattca gaagaattta acgaaagggt gaaaactgct caaaactctg cgaggcagct
    16681 tccagttcct gattagagaa atgaaaaaag cacccgacag gtgcttttct cgcgttcaag
    16741 tttgagtaaa aacttaaccg taaatattgg cgcgatcgcg cagttcttta ccaggtttaa
    16801 agtgaggaac gtattttcct tccagttcta ctttatcgcc agtcttcgga ttacgtccgg
    16861 tacgtggtgc gcggtagtgc aaagagaaac tgccgaaacc gcggatttca atacgctcgc
    16921 cctgcgcaag agtcgaggcc atatgctcca gcatctcttt tactgcatct tcaaccgtct
    16981 tggcgggaat gtgcgattgc tgggtggcaa gtctttctat caattctgac ttggtcatga
    17041 ttcctccggt tccttaaagg caaattaagc ggctgctgtt gctgcattga ttaagggcgg
    17101 ccgtagccgc ccttagtgct tgattacagg acgaaacctg caatctgtca agtaaactca
    17161 acaaacttcg gaataaaaat cccgaagagt cagagaatta ctcgccttta gctgctttga
    17221 aagcttcagc cattgcgttg ttggagaagt ttgcatcttc ctgtttgtta acagttgcga
    17281 ttgcatcttt ctcgtcagct tcgtctttcg cacgaacaga caggctgatt gcgcggtttt
    17341 tacgatcaac gccggtgaat ttagcttcaa cttcgtcgcc aacgctcaga accagggtag
    17401 cgtcttcaac gcggtcacgg gatgcttcag aagcacgcag gtaaccttca acgccgtcag
    17461 ccagttctac ggttgcgcct ttagcgtcaa ctgcagttac tttaccggtt acgatagcgc
    17521 ctttcttgtt cagagcaacc cagttgttga acggatcttc tgcgagctgt ttaacgccca
    17581 aggagatacg ttcacgttct gcgtcaacct gcagaacaac tgcagcgatt tcgtcgcctt
    17641 ttttgtattc acgaactgct tcttcgcctg caacgttcca ggagatgtca gacaggtgaa
    17701 ccaggccgtc gatgccgccg tctaggccga tgaagatacc gaagtcagtg atagacttga
    17761 ttttaccttc aacacggtcg cccttgttgt gggtttccgc gaactgctgc cacgggttag
    17821 ctttgcactg tttcagaccc agggagatac gacgacgttc ttcgtcgata tccagaacca
    17881 taacttccac tacatctcca acgttaacaa ctttggacgg gtggatgttt ttgttggtcc
    17941 aatccatttc ggaaacgtgt accaggcctt caacgccttc ttcgatttca acgaagcagc
    18001 cgtagtcggt caggttggtc acgcgaccag tcagtttggt accttccgga taacgtttag
    18061 cgatagctac ccacggatct tcgcccaact gtttcaggcc cagggataca cgggtacgtt
    18121 cgcggtcgaa cttcagcact ttaacagtga tttcgtcgcc cacgttgacg atttcgctcg
    18181 gatgcttaac gcgtttccag gccatgtcag tgatgtgcag caggccgtca acgccgccca
    18241 gatcaacgaa tgcaccgtag tcagtgaggt tcttaacgat acctttaact tccatgcctt
    18301 cctgcaggtt ttccagcagc tgatcgcgct ctgcgctgtt ttcggattcg ataacggcac
    18361 gacgagaaac aacaacgttg ttgcgcttct gatccagctt gattacttta aattcaagct
    18421 ctttgccttc caggtgcaga gtgtcacgca ccggacgaac gtctaccaga gaacctggca
    18481 ggaacgcacg aataccgttc agctcaacag tgaagccgcc cttaactttg ccgttgataa
    18541 caccggtaac agtttcagca tcttcgtaag ctttttccag cgtgatccag gcttcgtgac
    18601 gtttagcttt ctcacgggac agcagagttt caccgaagcc gtcttctact gcgtccagag
    18661 caacgtcaac ttcgtcacct acctggattt ccagctcgcc ctgggcgttt ttgaactgct
    18721 cagccgggat ggcggactca gatttcagac cagcgtcaac cagtactacg tctttgtcga
    18781 tagcaacaac aacgccacga acgatagaac ccgggcgggt ttcgatttct tttaaggact
    18841 cttcaaagag ttgagcaaaa gattcagtca tgtttaatct tcaggtttat atttaacgtc
    18901 cacctggctc catgccggat ggggttgttt aacatacccg ctgtcattcc attgcaacgg
    18961 gggtactgca aattcggtcg cttatgcgag agccaatttc tggcgcgcgt attgtagcgc
    19021 tttttcaatc acttgctcaa tgcttaaggt ggtggaatcc aacactaaag catcggctgc
    19081 cggaaccagt ggcgctaccg ctcggttacg atcgcggtcg tcgcgttctt tgatctcggc
    19141 caaaaggcgc tcaaagttaa cactaaagcc cttctcctgc aactgtagca tgcggcgatg
    19201 cgcacgttct tccgaggagg cgtcaaggaa aattttcact ggtgcatcag ggaataccac
    19261 cgttcccatg tcgcggccat cggcaatcag acctggtaat tcgcgaaacg cgcgttggcg
    19321 acgcaataat gcttcacgaa cgcgtgggaa tgtcgcgact tgtgaagccg cattcgccac
    19381 ttcctgagta cgaatttcgc cgctgacatc ttccccttcg aggatcactt ccagattgcc
    19441 attggttgac acaaaacgta catccagatg ggatgccagc ggtaccagcg catcttctga
    19501 cgcaacatca acatggtgat gtaatgccgc caatgccagt acgcgataaa ttgcacccga
    19561 atccagcaga tgccattgca atgcttccgc catagcctta cacaaggtgc ctttccctgc
    19621 accgcttggg ccatcaatgg taataaccgg ggcaattgcc gtcatcttta tctccttaaa
    19681 acaggcgtac cgttaacata accgcgcgca ttatacgcgc cgacgccaca aatcgttaac
    19741 gttgtgtgca aaaaccagtt ttgtctgtat tcagatgggg atttattgcg caattatagc
    19801 gggctggcag aagaccagcc cgaaagatga caatgattta cttaccagag gcgatacgat
    19861 cacggatgtg ttgcgcacgc tctgttgatg gtgggtgaga gtcaaacatg gactgggtgc
    19921 gaccgccatc cagactagcc agtttttcaa agctgccaac cagcccctag gtgctgatgc
    19981 cacgtttctt caacagatca aaggagaaat catctgcttc ggactcttta tcacgggagt
    20041 atttagcatt aatagcgcct tctgcgatat cacccaattg tgagcgggaa agctgggaag
    20101 ccacaccgct ggtagctgaa atggcatcgc gtgcggcaac gatcgcataa gaaactttca
    20161 tttcagccag cgagtgaccc aacgcgacgt ggcccagttc atggcccaga acaccttcaa
    20221 tttcgttgtc attcatcatg tccatcaggc cactgtagac acggacacag ccgttcgcca
    20281 tcgcccatgc gttgacgtcg ctggtcatat aaacctatag ttgaccggcg tgccattaat
    20341 attgttaccc aatgctttgg cgatttttgc cagacgttta ccgtacttgc tggatttact
    20401 tgcgacttga ttgccgctgt ccatttcggc acagccctga ttggcaatcg cttttgcatc
    20461 ggcatcgctt aatgttgctg ctttataggc atttaaaccg gagctgatag ccatattggt
    20521 atcaataccg tgggtatttt gacaccctgt cagtaatgct gcagaggtcg caatcgccag
    20581 cagtaattta gtattcttca tgtgaatcat ccgttgatta atcatatata aacattatgt
    20641 atcaacaact tacattgaca agcgacgcta ccattaatca aaatgactca caaggtccga
    20701 aaaaaaacgc cgacaatgtg
//
LOCUS       DADMJE010000062        20603 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.063, whole genome shotgun sequence.
ACCESSION   DADMJE010000062 DADMJE010000000
VERSION     DADMJE010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20603)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20603)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20603
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.063"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(56..481)
                     /gene="nudI"
                     /locus_tag="JN001_002061"
     CDS             complement(56..481)
                     /gene="nudI"
                     /locus_tag="JN001_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase NudI"
                     /protein_id="HAY9053297.1"
                     /translation="MRQRTIVCPLIQNDGAYLLCKMADDRGVFPGQWALSGGGVEYGE
                     RIEEALRREIREELGEQLLLTEITPWTFSDDIRTKTYADGRKEEIYMIYLIFDCVSAN
                     REVKINEEFQDYTWVKPEDLVHYDLNVATRKTLRLKGLL"
     gene            760..1302
                     /locus_tag="JN001_002062"
     CDS             760..1302
                     /locus_tag="JN001_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311165.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053298.1"
                     /translation="MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTEST
                     GLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGG
                     LQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK
                     DGNRDNAVADGPYVGVNASF"
     gene            1402..2604
                     /locus_tag="JN001_002063"
                     /pseudo
     CDS             1402..2604
                     /locus_tag="JN001_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416752.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamide mononucleotide deamidase-related
                     protein YfaY"
     gene            2824..3606
                     /locus_tag="JN001_002064"
     CDS             2824..3606
                     /locus_tag="JN001_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HAY9053299.1"
                     /translation="MLESSKVPALTRAIDILNLIARIGPCSAATIIDTLGIPKSTAYL
                     LLNELRRQRFLSLDHQENFCLWTRLVELSGHALSKMDLRELARPRLTQLMDTTGLLCH
                     LGIIDNGSAYYILKVESSATISVRSHEGKSLSLYRSGIGKCLLSWQPAAVQQSIIEGL
                     VWEQATPTTITHPQQLHEELARIRRQGWSYDNGEDYPDVRCVAAPVFNANNELTAAIS
                     VVGTRLQINEEYRDYLAGKSIACARDISRLLGWKSPFDLQAS"
     gene            3621..4826
                     /gene="rhmD"
                     /locus_tag="JN001_002065"
     CDS             3621..4826
                     /gene="rhmD"
                     /locus_tag="JN001_002065"
                     /EC_number="4.2.1.90"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311162.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnonate dehydratase"
                     /protein_id="HAY9053300.1"
                     /translation="MTLPKIKQVRAWFTGGATAEKGAGGGDYHDQGANHWIDDHIATP
                     MSKYRDYEQSRQSFGINVLGTLVVEVEAENGQTGFAVSTAGEMGCFIVEKHLNRFIEG
                     KCVSDIKLIHDQMLNATLYYSGSGGLVMNTISCVDLALWDLFGKVVGLPVYKLLGGAV
                     RDEIQFYATGARPDLAKEMGFIGGKMPTHWGPHDGDAGIRKDAAMVADMREKCGEDFW
                     LMLDCWMSQDVNYATKLAHACAPYNLKWIEECLPPQQYEGYRELKRNAPVGMMVTSGE
                     HHGTLQSFRTLSETGIDIMQPDVGWCGGLTTLVEIAAIAKSRGQLVVPHGSSVYSHHA
                     VITFTNTPFSEFLMTSPDCSTMRPQFDPILLNEPVPVNGRIHKSVLDKPGFGVELNRD
                     CNLKRPYSH"
     gene            4883..6172
                     /locus_tag="JN001_002066"
     CDS             4883..6172
                     /locus_tag="JN001_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053301.1"
                     /translation="MSTALLDAVVKKNRVRLIPFMLALYVLAFLDRSNIGFAKQTYQI
                     DTGLSNEAYALGAGIFFVVYAFLGVPANLLMRKLGARTWIGTTTLLWGFLSAAMAWAD
                     TEAKFLIVRTLLGAAEAGFFPGMIYLTSQWFPQRNRASIMGLFYMGAPLALTLGSPLS
                     GALLEMHGFMGHPGWFWMFVIEGLLAVGAGVFTFFWLDDTPEQARFLSKQEKTLLINQ
                     LASEEQQKVTSRLSDALRNGRVWQLAIIYLTIQVAVYGLIFFLPTQVAALLGTKVGFT
                     ASVVTAIPWVAALFGTWLIPRYSDKTGERRNVAALTLLAAGIGIGLSGLLSPVMAIVA
                     LCVAAIGFIAVQPVFWTMPTQLLSGTALAAGIGFVNLFGAVGGFIAPILRVKAETLFA
                     SDAAGLLTLAAVAVIGSLIIFTLRVNRTVAQTDVAHH"
     gene            6190..6993
                     /gene="yfaU"
                     /locus_tag="JN001_002067"
     CDS             6190..6993
                     /gene="yfaU"
                     /locus_tag="JN001_002067"
                     /EC_number="4.1.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-keto-3-deoxy-L-rhamnonate aldolase"
                     /protein_id="HAY9053302.1"
                     /translation="MNALLTNPFKERLRKGEVQIGLWLSSTTSYMAEIAATSGYDWLL
                     IDGEHAPNTIQDLYHQLQAVAPYASQPVIRPVEGSKSLIKQVLDIGAQTLLIPMVDTA
                     DQARQVSSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTALDN
                     LDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV
                     APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMFKSGKNGPRIKGSY"
     gene            complement(7034..7936)
                     /locus_tag="JN001_002068"
     CDS             complement(7034..7936)
                     /locus_tag="JN001_002068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000156133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISNCY family transposase"
                     /protein_id="HAY9053303.1"
                     /translation="MTESTTSSPHDAVFKTFMFTPETARDFLEIHLPEPLRKLCNLQT
                     LRLEPTSFIEKSLRAYYSDVLWSVETSDGDGYIYCVIEHQSSAEKNMAFRLMRYATAA
                     MQRHLDKGYDRVPLVVPLLFYHGETSPYPYSLNWLDEFDDPQLARQLYTEAFPLVDIT
                     IVPDDEIMQHRRIALLELIQKHIRDRDLIGMVDRITTLLVRGFTNDSQLQTLFNYLLQ
                     CGDTSRFTRFIEEIAERSPLQKERLMTIAERLRQEGHQIGWQEGMHEQAIKIALRMLE
                     QGIDRDQVLAATQLSEADLAANNH"
     gene            complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JN001_002069"
     CDS             complement(8129..9319)
                     /gene="glpC"
                     /locus_tag="JN001_002069"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit C"
                     /protein_id="HAY9053304.1"
                     /translation="MNDTSFENCIKCTVCTTACPVSRVNPGYPGPKQAGPDGERLRLK
                     DGALYDEALKYCINCKRCEVACPSDVKIGDIIQRARAKYDTTRPSLRNFVLSHTDLMG
                     SVSTPFAPIVNTATSLKPVRQLLDAALKIDHRRTLPKYSFGTFRRWYRSIAAQQAQYK
                     DQVAFFHGCFVNYNHPQLGKDLIKVLNAMGTGVQLLSKEKCCGVPLIANGFTDKARKQ
                     AITNVESIREAVGVKGIPVIATSSTCTFALRDEYPEVLNVDNKGLRDHIELATRWLWR
                     KLDEGKTLPLKPLPLKVVYHTPCHMEKMGWTLYTLELLRKIPGLELTVLDSQCCGIAG
                     TYGFKKENYPTSQAIGAPLFRQIEESGADLVVTDCETCKWQIEMSTSLRCEHPITLLA
                     QALA"
     gene            complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JN001_002070"
     CDS             complement(9316..10575)
                     /gene="glpB"
                     /locus_tag="JN001_002070"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708132.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase subunit GlpB"
                     /protein_id="HAY9053305.1"
                     /translation="MRFDTVIMGGGLAGLLCGLQLQKHGLRCAIVTRGQSALHFSSGS
                     LDLLSHLPDGQPVADIHSGLESLRQQAPAHPYSLLGPQRVLDLACQAQALIAESGAQL
                     QGSVELAHQRITPLGTLRSTWLSSPEVPVWPLPAKKICVVGISGLMDFQAHLAAASLH
                     ELDLSVETAEIELPELDVLRNNATEFRAVNIARFLDNEENWPLLLDALIPVANTCEMI
                     LMPACFGLADDKLWRWLNEKLLCSLMLLPTLPPSVLGIRLQNQLQRQFVRQGGVWMPG
                     DEVKKVTCKNGVVNEIWTRNHADIPLRPHFAVLASGSFFSGGLVAERNGIREPILGLD
                     VLQTATRGEWYKGDFFAPQPWQQFGVTTDETLRPSQAGQTIENLFAIGSVLGGFDPIA
                     QGCGGGVCAVSALHAAQQIAQRAGGQQ"
     gene            complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JN001_002071"
     CDS             complement(10565..12193)
                     /gene="glpA"
                     /locus_tag="JN001_002071"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic glycerol-3-phosphate dehydrogenase
                     subunit A"
                     /protein_id="HAY9053306.1"
                     /translation="MKTRDSQSSDVIIIGGGATGAGIARDCALRGLRVILVERHDIAT
                     GATGRNHGLLHSGARYAVTDAESARECISENQILKRIARHCVEPTNGLFITLPEDDLS
                     FQATFIRACEEAGISAEAIDPQQARIIEPAVNPALIGAVKVPDGTVDPFRLTAANMLD
                     AKEHGAVILTAHEVTGLIREGATVCGVRVRNHLTGETQALHAPVVVNAAGIWGQHIAE
                     YADLRIRMFPAKGSLLIMDHRINQHVINRCRKPSDADILVPGDTISLIGTTSLRIDYN
                     EIDDNRVTAEEVDILLREGEKLAPVMAKTRILRAYSGVRPLVASDDDPSGRNVSRGIV
                     LLDHAERDGLDGFITITGGKLMTYRLMAEWATDAVCRKLGNTRPCTTADLALPGSQEP
                     AEVTLRKVISLPAPLRGSAVYRHGDRTPAWLSEGRLHRSLVCECEAVTAGEVQYAVEN
                     LNVNSLLDLRRRTRVGMGTCQGELCACRAAGLLQRFNVTTSAQSIEQLSTFLNERWKG
                     VQPIAWGDALRESEFTRWVYQGLCGLEKEQKDAL"
     gene            12466..13824
                     /gene="glpT"
                     /locus_tag="JN001_002072"
     CDS             12466..13824
                     /gene="glpT"
                     /locus_tag="JN001_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate transporter"
                     /protein_id="HAY9053307.1"
                     /translation="MLSIFKPAPHKARLPAAEIDPTYRRLRWQIFLGIFFGYAAYYLV
                     RKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLIL
                     AAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
                     WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLP
                     PIEEYKNDYPDDYNEKAEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWS
                     PTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTI
                     ATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFG
                     YLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQKRN
                     GG"
     gene            13829..14905
                     /gene="glpQ"
                     /locus_tag="JN001_002073"
     CDS             13829..14905
                     /gene="glpQ"
                     /locus_tag="JN001_002073"
                     /EC_number="3.1.4.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HAY9053308.1"
                     /translation="MKLTLKNLSMAIMMSTIVMGSSAMAADSNEKIVIAHRGASGYLP
                     EHTLPAKAMAYAQGADYLEQDLVMTKDDHLVVLHDHYLDRVTDVADRFPDRARKDGRY
                     YAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKSDFRVHTFEEEIEFVQGLNH
                     STGKNIGIYPEIKAPWFHHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRI
                     KNELEPKMGMELNLVQLIAYTDWNETQQKQPDGSWVNYNYDWMFKPGAMKQVAEYADG
                     IGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDKLPEYTPDVNQLYDAL
                     YNKAGVNGLFTDFPDKAVKFLNKE"
     gene            complement(14947..15189)
                     /locus_tag="JN001_002074"
                     /pseudo
     CDS             complement(14947..15189)
                     /locus_tag="JN001_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311149.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            15368..16018
                     /gene="inaA"
                     /locus_tag="JN001_002075"
                     /pseudo
     CDS             15368..16018
                     /gene="inaA"
                     /locus_tag="JN001_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416740.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide kinase InaA"
     gene            complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JN001_002076"
     CDS             complement(16072..16326)
                     /gene="yfaE"
                     /locus_tag="JN001_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like diferric-tyrosyl radical
                     cofactor maintenance protein YfaE"
                     /protein_id="HAY9053309.1"
                     /translation="MARVTLRITGTQLLCQDEHPSLLAALESHNVAVEYQCREGYCGS
                     CRTRLVAGQVDWIAEPLAFIQPGEILPCCCRAKGDIEIEM"
     gene            complement(16326..17456)
                     /locus_tag="JN001_002077"
     CDS             complement(16326..17456)
                     /locus_tag="JN001_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006683700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase 1 subunit
                     beta"
                     /protein_id="HAY9053310.1"
                     /translation="MAYTTFSQTKNDQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQ
                     LSFFWRPEEVDVSRDRIDYQALPEHEKHIFISNLKYQTLLDSIQGRSPNVALLPLISI
                     PELETWVETWAFSETIHSRSYTHIIRNIVNDPSVVFDDIVTNEQIQKRAEGISSYYDE
                     LIEMTSYWHLLGEGTHTVNGKTVTVSLRELKKKLYLCLMSVNALEAIRFYVSFACSFA
                     FAERELMEGNAKIIRLIARDEALHLTGTQHMLNLLRSGADDPEMAEIAEECKQECYDL
                     FVQAAQQEKDWADYLFRDGSMIGLNKDILCQYVEYITNIRMQAVGLDLPFQTRSNPIP
                     WINTWLVSDNVQVAPQEVEVSSYLVGQIDSEVDTDDLSNFQL"
     gene            complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JN001_002078"
     CDS             complement(17603..19888)
                     /gene="nrdA"
                     /locus_tag="JN001_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HAY9053311.1"
                     /translation="MNQNLLVTKRDGSTERINLDKIHRVLDWAAEGLHNVSISQVELR
                     SHIQFYDGIKTSDIHETIIKAAADLISRDAPDYQYLAARLAIFHLRKKAYGQFEPPAL
                     YDHVVKMVEMGKYDNHLLEDYTEEEFKQMDTFIDHDRDMTFSYAAVKQLEGKYLVQNR
                     VTGEIYESAQFLYILVAACLFSNYPRETRLQYVKRFYDAVSTFKISLPTPIMSGVRTP
                     TRQFSSCVLIECGDSLDSINATSSAIVKYVSQRAGIGINAGRIRALGSPIRGGEAFHT
                     GCIPFYKHFQTAVKSCSQGGVRGGAATLFYPMWHLEVESLLVLKNNRGVEGNRVRHMD
                     YGVQINKLMYTRLLKGEDITLFSPSDVPGLYDAFFADQEEFERLYTKYEKDDSIRKQR
                     VKAVELFSLMMQERASTGRIYIQNVDHCNTHSPFDPAIAPVRQSNLCLEIALPTKPLN
                     DVNDENGEIALCTLSAFNLGAINNLDELEELAILAVRALDALLDYQDYPIPAAKRGAM
                     GRRTLGIGVINFAYYLAKHGKRYSDGSANNLTHKTFEAIQYYLLKASNELAKEQGECP
                     WFNETTYAKGILPIDTYKKDLDAIANEPLHYDWEALRESIKTHGLRNSTLSALMPSET
                     SSQISNATNGIEPPRGYVSIKASKDGILRQVVPDYEHLHDAYELLWEMPGNDGYLQLV
                     GIMQKFIDQSISANTNYDPSRFPSGKVPMQQLLKDLLTAYKFGVKTLYYQNTRDGAED
                     AQDDLVPSIQDDGCESGACKI"
BASE COUNT         4846 a         4992 c         5525 g         5240 t
ORIGIN      
        1 aattcgttaa ccactaaatt ttcaatctga cagccagtga tggctgtcat cattgttaaa
       61 gaagaccttt caaacgtaac gtttttcggg tggcaacatt caaatcataa tgcaccagat
      121 cttcaggttt tacccacgtg tagtcctgaa actcttcgtt tattttcact tctcggttgg
      181 cagaaacgca gtcaaaaatc aggtaaatca tataaatctc ttccttgcga ccatctgcat
      241 acgtcttggt gcgaatatca tcgctgaagg tccacggcgt gatttctgtc aaaagcagct
      301 gttctcccag ttcttcgcga atttcgcggc gtagtgcctc ttcaattcgt tcgccatact
      361 ccacgccgcc acccgaaagc gcccattgac cggggaaaac gccgcgatcg tcggccattt
      421 tgcacagcag ataagcacca tcattttgaa tcaaagggca tacaatagtc cgttgtcgca
      481 caggggtatt ccttataaat aaaaagaaac catgagaata cggtaactca gaaatatgtg
      541 aaagtgacag taatctcttt tgcgatgata actgcactta ttattatttt tgtgtgtatc
      601 ggtaaagtgt gtttattttt tcggcgttta attatttaag aagtatttag ttacaataag
      661 tgactagatc ccttttttcg ctcattgaat cctctgtgcc aggcagtaca atcccgcagc
      721 tttgggaatt ttgattaatt gcttgtggga aaggggataa tgaaaaaaat tgcgctagca
      781 ggtctggccg gaatgctgtt ggtttctgca tcggtcaatg caatgagcat cagcggtcag
      841 gcgggtaaag aatacaccaa tattggtgtc ggttttggga ctgaatcgac gggcctggcg
      901 ttaagcggta actggacaca taacgacgac gacggtgacg tcgctggcgt ggggctgggg
      961 ttgaatctgc ctctagggcc gttaatggcg accgttggcg gaaaaggcgt ttacaccaac
     1021 ccgaattacg gcgatgaagg ttatgccgca gcggtaggag gtggtttgca gtggaaaatt
     1081 ggcaacagct tccgtttgtt tggcgagtat tactactctc cggattcact ctccagcggt
     1141 attcaaagtt atgaggaagc gaatgctggc gcgcgttaca ccattatgcg tccagtcagt
     1201 attgaggcgg gttatcgcta cctgaatttg tcgggtaaag atggtaaccg cgacaacgcc
     1261 gtggctgacg gcccgtatgt tggggttaac gccagtttct gatcccttcc ggcgcggcat
     1321 tctgtcgcgc cattcagttt cttactacgc cttatctccc tttgcgttat agtgattcga
     1381 taacaaaagc aggagataac catgttaaaa gtggaaatgt tatccaccgg ggatgaagtg
     1441 ttacacgggc aaatcgttga cactaacgct gcctggctgg ccgatttttt ctttcatcag
     1501 gggctgccat tatctcgcct caatacggtg ggggataacc ttgatgactt agtcaccatt
     1561 cttcgcgaac gtagtcagca cgccgatgtg ctgatcgtta acggcgggct gggaccgacc
     1621 agcgatgatt taagcgcact cgccgctgcg acagcaaaag gtgaaggcct ggtgctgcat
     1681 gaagcctggc tcaaagagat ggaacgctat ttccacgaac gtggacgagt aatggcaccg
     1741 agcaaccgta aacaagcgga gctgcctgcc agtgctgaat ttatcaataa cccggtaggc
     1801 accgcctgtg gttttgccgt gcagcttaat cgttgcctga tgttctttac tcccggcgta
     1861 ccgtcagaat ttaaggtgat ggtcgagcac gaaatcctgc cgcgcctgcg cgagcgtttt
     1921 tctttaccac agccgccggt ttgtctgcgt ttaactacct ttggtcgttc ggaaagcgat
     1981 ctggcacaaa gcctggacac tctacaactg ccgccgggcg taacaatggg ctatcgctct
     2041 tcaatgccga ttatcgaact gaaactcacc ggaccggcaa gcgagcaaca ggcgatggaa
     2101 aaactgtggc tggacgttaa acgtgttgcc ggacagagcg tgattttcga aggcaccgaa
     2161 ggactgcccg tgcagatcag tcgcgaattg caaaaccgcc agttcagcct gacgttgagc
     2221 gagtaattca ccggtggttt attggctttg caactttctc gcgcaggtgc tccattgctg
     2281 gcgtgtgaag tggttccttc acaggaagaa aacctggcgc aaactgcgca ctggattaca
     2341 gaacggcggg ccaaccattt tgccgggctg gcactggctg tttcgggttt cgagaacgaa
     2401 catctcaact ttgcgctagc cacaccagac ggcactttcg ctctgcgtgt gcgtttcagc
     2461 actacgcgct acagcctggc tatccgtcag gaagtgtgcg caatgatggc actgaatatg
     2521 ctgcgccgtt ggttaaacgg ccaggatatc gccagtgagc atggctggat tgaggttatt
     2581 gagtccatga ccttatctgt ctgattccgc cactctgtgc cggtttactg caccggcaca
     2641 ttccccctcc ggcaaaactt gtccaacctg ttgcactcaa taagaaaaaa tccgtgcact
     2701 gattcacaaa tttgtgcgta atttctccag tccgctggac gaggagcggg atttgatgcg
     2761 cttcacaatt ttactccccc tgagcaacga gactgattcc agtatctaag actggagtcc
     2821 agtatgttgg aatcaagcaa agttcccgcc ctgacacggg ctattgatat tctaaatttg
     2881 attgcccgca ttggcccctg tagtgctgcg acgatcattg acacattggg aatccctaaa
     2941 agcacggcct atttgctgct taatgaactc aggcgtcagc gttttcttag ccttgatcac
     3001 caggaaaatt tttgtttgtg gaccaggctg gtggagcttt ctggtcatgc gttaagcaag
     3061 atggatctcc gggaactggc tcgaccgcgt ttgacgcaac tgatggatac caccgggctg
     3121 ttatgtcatc tggggattat tgataacggc agcgcttatt acattttaaa agtggagtca
     3181 tcagccacta tcagcgtgcg ttcccatgaa ggaaaaagcc tttcgcttta tcgctccgga
     3241 ataggtaaat gcctgctttc ctggcaacct gcagcggtac agcaaagtat tatcgaaggg
     3301 ctggtctggg agcaggcgac acccacaacg attactcatc cacagcaact tcacgaagaa
     3361 ctggcgcgta ttcgccgtca gggctggagc tatgacaacg gcgaagatta ccccgatgtc
     3421 cgttgtgtcg ctgcgccggt gtttaacgcc aataacgagc ttaccgctgc gatctcggtg
     3481 gtcggtaccc gcttacaaat caatgaagaa taccgtgatt atctggcggg caagtccatt
     3541 gcctgcgcca gggatatttc acgtctgttg ggatggaaaa gtccctttga cttacaagcc
     3601 tcataacaat ggagaacatc atgaccctac caaaaattaa acaggttcgc gcctggttta
     3661 ctggcggtgc gacagcagaa aaaggcgctg gcggcggtga ttatcacgac cagggggcga
     3721 atcactggat agacgatcat attgccaccc cgatgagtaa ataccgcgat tacgagcagt
     3781 cacgccagtc atttggcatt aacgttcttg gcacgttggt tgttgaagtc gaagcagaaa
     3841 acggccagac cggattcgct gtttcgacag ccggtgaaat gggctgtttt atcgtcgaaa
     3901 aacaccttaa ccgtttcatt gagggtaaat gtgtcagtga tatcaaactg atccacgatc
     3961 aaatgctcaa tgccaccctg tattactccg gctctggtgg cttggtgatg aatacgattt
     4021 cctgtgtcga tctggctctg tgggatctgt tcggcaaagt ggtcgggctt ccggtttata
     4081 aacttttagg cggcgctgtt cgtgatgaga ttcagttcta cgccacaggt gcgcgtccgg
     4141 atctggcaaa agagatgggc tttatcggtg gcaaaatgcc gacgcactgg gggccacatg
     4201 atggcgatgc ggggatccgc aaagatgccg ctatggtcgc ggatatgcgt gaaaaatgcg
     4261 gtgaagattt ctggttaatg ctcgactgct ggatgagtca ggacgtgaac tatgcgacca
     4321 aactagccca cgcttgcgcg ccctataacc tgaaatggat cgaagagtgc ctgccgccac
     4381 agcagtatga aggttatcgc gaactgaaac gcaacgcgcc agtcggaatg atggtcacca
     4441 gcggtgagca ccacggcaca ctgcaatctt ttcgtacgct ttcagaaacc ggtatcgaca
     4501 ttatgcagcc ggatgttggc tggtgcggtg gtttaaccac gctggtggaa attgccgcaa
     4561 tcgccaaatc cagggggcaa ctggtggtgc cgcacggttc gtctgtttac tctcaccatg
     4621 cggtgatcac cttcaccaat acgccattca gcgaattcct gatgaccagc ccggattgtt
     4681 caacgatgcg tccgcagttt gacccgattc tgctcaatga gccggttccg gtgaatggtc
     4741 gtattcataa atcagtgctt gataaacccg gttttggcgt cgaactcaat cgtgactgca
     4801 atttgaaacg cccctacagc cactaatcac tccgggcgtt gctgtgacaa cggtaacgcc
     4861 cacatattct aaggagcttt ttatgagcac cgctttgctt gacgccgtgg tgaagaaaaa
     4921 ccgtgtgcgt ttaattccgt ttatgttggc gctgtatgtg ctggcgtttc tcgaccgttc
     4981 gaatatcggt tttgccaaac agacctacca gattgatacc gggttgagta atgaagctta
     5041 tgcgctggga gcaggcattt tctttgtggt atatgcgttt ctgggggttc cggcgaatct
     5101 tttgatgcgc aaactggggg ccagaacctg gattggtacg acaacactgc tgtggggatt
     5161 tctttcggca gccatggcat gggccgatac tgaagcgaaa tttctgatag ttcgcactct
     5221 gcttggtgct gcggaggccg gatttttccc tggtatgatt tatctcacct cgcaatggtt
     5281 tccgcagcgt aatcgcgcca gcattatggg gctgttctat atgggcgcac cgctggcgtt
     5341 aacactggga tcaccgcttt ccggcgcgct gttggagatg catggattta tggggcatcc
     5401 cggctggttc tggatgtttg tgattgaagg attgttggca gtcggtgctg gggtattcac
     5461 attcttttgg cttgatgaca caccggagca ggcacgtttt ctgagtaaac aagaaaaaac
     5521 gttgcttatc aatcaactgg caagtgaaga acaacagaaa gtgacttctc ggctgagcga
     5581 tgcgctgcgt aatggccgag tctggcaact agcgattatc tacctgacca ttcaggtggc
     5641 ggtttacgga ttaattttct tcctgccgac ccaggttgcg gcattgctgg gaacaaaagt
     5701 gggctttaca gcgtcggtgg tcaccgccat tccgtgggtt gcggccttgt ttgggacctg
     5761 gcttattccg cgctattccg ataaaaccgg cgaacggcgt aatgtcgcag cgctgacatt
     5821 actggcggcg ggcattggta ttggtctgtc cgggctgctt tctccagtaa tggcgatcgt
     5881 agcgctgtgt gttgcagcta tcgggtttat tgccgtgcag ccggtgttct ggacgatgcc
     5941 gacacaactg ctttccggta cggcgctggc tgcggggatt ggttttgtaa acctgtttgg
     6001 tgcagtgggc gggtttattg ccccgatcct gcgcgtgaaa gcagaaacgt tatttgccag
     6061 cgatgcggca ggattactga cactggcagc ggtggcggtc atcggttcgc tgattatttt
     6121 cactctgcgt gtaaatcgta ctgttgcgca gaccgacgtg gcacatcatt aaataggtta
     6181 aggaacacga tgaacgcatt attaaccaat ccctttaaag aacgtttacg caagggcgaa
     6241 gtgcaaattg gtctgtggtt aagctcgact acttcttata tggcagaaat tgccgctact
     6301 tccggttatg actggttgct gattgacggg gagcacgcgc caaacaccat tcaggatctt
     6361 tatcaccagc tacaggcggt agcgccctat gccagccaac ccgtgatccg tccggtggaa
     6421 ggcagtaaat cgctgattaa acaagttctg gatattggcg cgcaaactct attgatcccg
     6481 atggtcgata ctgccgatca ggctcgtcag gtgtcgtctg ccacgcgcta tcctccctac
     6541 ggtgagcgtg gtgttggggc cagtgtggca cgggctgcgc gctggggacg cattgagaat
     6601 tacatggcgc aagtcaacga ttcgctttgt ctgttagtgc aggtggaaag taaaacggca
     6661 ctggataacc tggacgagat cctcgacgtc gaagggattg atggcgtgtt tattggacca
     6721 gcggatcttt ctgcgtcgtt gggctacccg gataacgccg ggcacccgga agtgcagcga
     6781 attattgaaa ccagcattcg gcggatccgt gctgcgggta aagcggctgg ttttctggct
     6841 gtggctcctg atatggcgca gcaatgcctg gcgtggggag cgaactttgt cgctgttggc
     6901 gttgacacga tgctctacag cgatgccctg gatcaacgac tggcgatgtt taaatcaggc
     6961 aaaaatgggc cacgcataaa aggtagttat tgatatcaaa ggcccatggg gatcggctgt
     7021 gggcctgtgt taattagtgg ttattcgctg ccagatcggc ttcgcttagc tgggtggccg
     7081 cgagcacctg gtcacgatca atgccctgtt ccagcatgcg caaagcaatt ttaatggctt
     7141 gttcatgcat accttcctgc cagccaattt gatgcccttc ctgccgtagc cgttcagcaa
     7201 tagtcattaa tctctccttt tgtagtggtg aacgttcggc aatctcctca ataaaacggg
     7261 tgaaacggga ggtatcgccg cattgcagca gataattaaa cagtgtttgt agctggctgt
     7321 cattagtgaa gcctctaacc aaaagcgtgg tgatcctgtc gaccatgccg attaaatcgc
     7381 ggtcgcgaat atgcttttga atcagttcca gcagagctat acgccgatgt tgcatgatct
     7441 catcgtcagg tacgatggtg atatccacca acggaaaagc ttcggtgtac aactgccggg
     7501 caagttgcgg atcgtcaaac tcatccagcc agttaagtga gtacgggtag ggcgatgttt
     7561 cgccatgata aaacagcaat ggcaccacca gcggaactct gtcatagcct ttatccaggt
     7621 gacgctgcat ggcggcagtg gcatagcgca ttagccgaaa agccatattc ttttctgcag
     7681 agctttgatg ttcaatcacg cagtagatat agccgtcacc gtcgctggtt tccacggacc
     7741 acaaaacatc cgagtagtaa gcgcgtaaac ttttttcaat aaaactagtg ggttccaggc
     7801 gtaaggtttg caggttgcaa agcttgcgca gtggttctgg taaatgtatt tcgagaaaat
     7861 cccgtgcggt ttcgggtgtg aacataaagg ttttaaatac cgcatcatgc ggggaggagg
     7921 ttgttgattc ggtcatggtt gtccgtcacc tgatatttat gatgacgcga cattacggtt
     7981 atcctaggcc tttgacatct gccagtttca gcctttgcga gacgttttca gaggaatttt
     8041 cactgcgttg caacgcatac attgggcacg gaatcgtgta cgcaaaaatg cccggtaacc
     8101 acatgcttac cgggcatcag aaaggagttt aagccagcgc ctgggccagt agcgtaatcg
     8161 gatgttcgca gcgaagactt gtggacatct caatctgcca tttacaggtt tcgcagtcgg
     8221 tgaccaccag atctgcgccg ctttcttcta tctggcggaa cagtggtgcg ccgatggctt
     8281 gtgaggtggg gtagttctct tttttgaaac cgtaagtacc cgcaataccg cagcactggg
     8341 aatccagcac cgttaactca agccccggga ttttacgcaa cagctccagg gtgtagagcg
     8401 tccagcccat tttttccata tggcacggag tgtgataaac cactttcagc ggcagcggtt
     8461 tcagcggtaa cgttttgcct tcgtccagct tgcgccacag ccagcgggtt gccagttcga
     8521 tatgatcgcg caagcctttg ttgtcgacat tcagcacttc cgggtattcg tcgcgcaggg
     8581 caaatgtaca ggttgaggag gtggcaatca ccggaatgcc ttttactccc acagcttcgc
     8641 ggatcgactc tacattcgta attgcctgtt tgcgtgcttt atcggtaaag ccgttggcga
     8701 ttagcggtac gccgcagcat ttttctttgc tgagcagttg tacaccggta cccattgcgt
     8761 tgagcacttt aattaaatct ttacctaact gcggatggtt gtagttaacg aagcagccgt
     8821 gaaagaaagc gacctggtct ttatattgtg cttgctgagc cgctatgctg cgataccagc
     8881 gacggaacgt gccgaaggag tatttcggta gcgtgcgacg atgatcgatt tttaacgccg
     8941 catcaagcag ctgccgcacc ggtttcagcg aggtagcggt gttgacgatt ggtgcgaacg
     9001 gcgtggaaac gctacccatc aggtcggtat gactcaacac aaaattacgc agcgacgggc
     9061 gcgtggtgtc atattttgcc cgcgcgcgct ggataatatc gccaatcttc acatcggacg
     9121 ggcaggcgac ttcacaacgt ttgcagttga tgcaatattt cagcgcctcg tcatacagtg
     9181 cgccatcttt caaacgcaga cgctcgccat ccggcccggc ttgttttggc cctggataac
     9241 cgggattcac ccggctcacc gggcaggcgg tggtgcagac ggtgcactta atgcagtttt
     9301 cgaagctggt gtcgttcatt gttggcctcc tgcgcgttgg gcaatctgtt gagcggcatg
     9361 taaagcactg acggcacaaa caccgccgcc gcatccctgg gcgatgggat caaatccgcc
     9421 cagcaccgaa ccgatggcaa acaggttctc aatggtttgc cctgcctgcg acgggcgtag
     9481 cgtctcatca gtggttacac cgaactgctg ccacggttgc ggcgcaaaaa aatcgccctt
     9541 ataccattca ccccgcgtgg cggtttgtag cacatcaagg ccgagaatcg gctcgcgaat
     9601 gccgttacgt tccgctacca gtccgccact aaagaaactg ccgctggcga gaaccgcgaa
     9661 atgtggacgt agcggaatat cggcgtgatt gcgggtccag atttcattca ctacgccatt
     9721 tttacaggtc acttttttca cttcatcgcc cggcatccac acgccaccct ggcgcacaaa
     9781 ctggcgctgt aactggtttt gcagacgaat gcccagcacg gaaggcggca gcgttggcaa
     9841 aagcatcagt gaacaaagta gtttttcatt caaccaacgc cacagtttgt catcggccag
     9901 gccgaagcag gcaggcatca ggatcatttc gcaggtattg gcgacaggaa taagcgcatc
     9961 aagtaacagc ggccagtttt cttcattatc aaggaaacgg gcgatattca cagcgcgaaa
    10021 ttcggtggcg ttattgcgca ggacatccag ttccggcagc tctatttctg cggtttcaac
    10081 cgaaagatcc agttcgtgca acgaagccgc cgcaagatgc gcctgaaaat ccatcaggcc
    10141 gcttatcccg accacacata ttttcttcgc gggcaacggc cagacgggga cttctggcga
    10201 acttagccag gtagagcgca gagtgccgag cggcgtaatc cgctggtgag ccagttctac
    10261 gctgccctgc aattgcgcac cgctttcagc gattaatgcc tgcgcctggc aagcgagatc
    10321 gagcacgcgt tgtggcccga gaagagagta aggatgtgca ggtgcctgct gacgcaaaga
    10381 ttccagtcca ctgtgaatgt ctgccacggg ttgaccatct ggcagatggc tcagcaaatc
    10441 cagcgaaccg gatgagaaat gcaacgcgct ttgaccacgc gtgacaatgg cacagcgcag
    10501 gccgtgtttt tgcagttgca ggccacagag taatccggcg aggccgccgc ccataatgac
    10561 agtatcaaag cgcatctttc tgctccttct ccagaccaca cagtccctga taaacccagc
    10621 gggtaaattc gctttcgcgc agtgcgtctc cccaggcgat gggttgcacg cctttccagc
    10681 gttcgttaag gaaggtggaa agttgctcga tagattgcgc ggacgtcgtg acgttaaacc
    10741 gttgcagcag tccggcagcg cggcaggcgc agagttcgcc ctggcaggtg cccatcccca
    10801 cacgggtacg acggcgtaaa tccagcaggc tattaacgtt taaattttct accgcgtact
    10861 gcacttcacc cgcagttacc gcttcgcact cacataccag gctacggtgc agacggcctt
    10921 cgctcagcca ggcaggcgtg cgatcgccat gacgataaac cgcagaaccg cgcagcgggg
    10981 caggcaggga gatgacttta cgcaaggtaa cttcagcggg ttcttgtgaa ccaggcagtg
    11041 ccagatcggc agtcgtacag gggcgcgtgt tgcccagttt gcggcatacc gcgtcggtag
    11101 cccattcagc catcagccga taggtcatca gtttgccacc ggtgatggtg ataaatccgt
    11161 ccagaccatc gcgttcagca tggtcgagca gcacgatgcc acggctgacg ttacgtccgc
    11221 tcggatcgtc atcgctggca accagcgggc gcacgccaga ataggcccgc aaaatgcgcg
    11281 ttttcgccat cacgggggcc agtttttccc cttcacgcag cagaatatca acctcttctg
    11341 ccgtcactcg attatcgtca atctcgttgt aatcaatacg taaagaggtg gtaccaatca
    11401 gcgaaatggt atcgccaggc accagaatat cggcgtcgga aggtttacgg cagcggttga
    11461 tcacatgctg gttaatgcgg tgatccatga tcagcagcga tcctttcgcc gggaacatgc
    11521 gaatgcgcag atcggcatat tcggcaatgt gttgccccca gatcccagcg gcattaacca
    11581 cgacaggtgc atgaagggcc tgagtttcgc cggtgagatg gttacgtaca cgaacaccgc
    11641 acaccgtcgc gccttcacga atcagccccg tgacttcatg agcggtaagg ataacggcac
    11701 cgtgttcttt ggcatccagc atgtttgctg cggtcagacg aaatggatca acggtgccat
    11761 ccggaacttt caccgcgcca atcagtgccg ggttaacggc aggttcgata atgcgcgctt
    11821 gctgcgggtc tatagcttct gcgctgatcc ctgcttcttc gcaggcgcga ataaaagtgg
    11881 cctggaatga gaggtcatct tccggcaggg tgataaacag gccgttggtt ggttcaacgc
    11941 agtgacgtgc aatgcgtttc aggatctggt tttcactaat gcattcgcgg gccgattccg
    12001 catcggttac cgcatagcgc gcaccgctgt gcagcaggcc gtggttacgc ccggtggcac
    12061 cggttgcgat gtcgtggcgc tcaaccaaaa tcacgcgcag cccgcgcagg gcacagtcgc
    12121 gggcaatccc ggctcccgtt gcgccgccgc caatgataat cacgtcactt gattgcgagt
    12181 cgcgagtttt cattgttatc cctctgaagt tcgtttttta ccatttagcc atagtaaaaa
    12241 catgaattgt ttgatttcgc gcatgttcgc tcataattcg aaagtgaaac gtgatttcat
    12301 gcgtcatttt gaacattttg taaatcttat ttaataatgt gtgcggcaat tcacatttaa
    12361 tttatgaatg ttttcttaac atcgcggcaa ctcaagaaac ggcaggttct ctcactgaat
    12421 caggctgtta atcataaata agaccacggg ccacggaggc tatcaatgtt gagtattttt
    12481 aaaccagcgc cacacaaagc gcgcttacct gctgcggaga tcgatccgac ttatcgtcga
    12541 ttgcgctggc aaattttctt ggggatattc tttggctatg cggcttacta tttggttcgt
    12601 aagaactttg cgcttgctat gccttatctg gtcgagcagg gattctctcg cggtgattta
    12661 ggtttcgcgc tttcggggat ctcgatcgct tatggatttt cgaaattcat aatgggttcg
    12721 gtatcagatc gctcgaatcc gcgcgttttc ctccccgcag gtttgattct ggcggcggca
    12781 gtgatgttgt ttatgggctt tgtgccatgg gcgacgtcga gcattgcggt gatgtttgta
    12841 cttttgttcc tctgcggttg gttccagggg atggggtggc cgccgtgtgg tcgtactatg
    12901 gtgcactggt ggtcgcagaa agaacgtggc ggcattgtgt cagtgtggaa ctgtgcgcac
    12961 aacgttggtg gtggtattcc gccgctgctg ttcctgctgg ggatggcctg gttcaatgac
    13021 tggcatgcgg cgctctatat gcctgctttc tgcgccattc tggtggcatt attcgccttt
    13081 gcgatgatgc gcgatacccc gcaatcctgt ggcttgccgc cgatcgaaga gtacaaaaat
    13141 gattatccgg acgactataa cgaaaaagcg gaacaggagc tgacggcgaa gcaaatcttc
    13201 atgcagtacg tactgccgaa caaactgctg tggtatatcg ccatcgccaa cgtgttcgtt
    13261 tatctgctgc gttacggcat cctcgactgg tcaccgactt atctgaaaga ggttaagcat
    13321 ttcgcgctgg ataaatcctc ctgggcctac ttcctttatg aatatgcagg tattccgggc
    13381 actctgctgt gcggctggat gtcggataaa gtcttccgtg gcaaccgtgg ggcaaccggc
    13441 gttttcttta tgacactggt gaccatcgcg actatcgttt actggatgaa cccggcaggt
    13501 aacccaaccg tcgatatgat ttgtatgatt gttatcggct tcctgatcta cggtcctgtg
    13561 atgctgatcg gtctgcatgc gctggaactg gcaccgaaaa aagcggcagg tacggcagcg
    13621 ggctttaccg ggctgtttgg ttacctgggc ggttcggtgg cggcgagcgc gattgttggc
    13681 tacaccgtgg acttcttcgg ctgggatggc ggctttatgg taatgattgg cggcagcatt
    13741 ctggcggtta tcttgttgat tgttgtgatg attggcgaaa aacgtcgcca tgaacaatta
    13801 ctacaaaaac gcaacggagg ctaatggcat gaaattgacg ctgaaaaacc ttagcatggc
    13861 gatcatgatg agcactatag tcatgggaag cagtgcaatg gcggcggaca gcaacgaaaa
    13921 aatagtcatc gcccatcgcg gtgccagtgg atatttgccg gagcatacgc tgccagcaaa
    13981 agcgatggcg tatgcgcagg gagcggatta tctggaacag gatttggtga tgaccaaaga
    14041 cgaccatctg gttgttctgc atgaccatta tctcgatcgt gttactgatg ttgccgatcg
    14101 tttcccggat cgggcgcgca aagacggtcg ttactacgcg atagatttca cgctggatga
    14161 aattaagtcg ttgaaattta ccgaaggttt cgatattgaa aacggtaaaa aagtgcagac
    14221 ttatccgggg cgtttcccaa tgggtaagtc cgacttccgg gtgcacacct ttgaagaaga
    14281 gattgaattt gttcaggggt taaatcactc taccgggaaa aatatcggta tttatccaga
    14341 aatcaaagcg ccgtggttcc atcatcagga agggaaggat attgcggcaa aaacgctgga
    14401 agtgctgaag aaatatggtt acaccggtaa agacgataaa gtttatttgc aatgttttga
    14461 tgctgatgag ctgaagcgta ttaagaatga gctggaaccc aaaatgggca tggagctcaa
    14521 tctggtacag ctgattgcct ataccgactg gaatgaaacg cagcagaaac agccggatgg
    14581 aagctgggtt aattacaact acgactggat gtttaagccg ggtgccatga aacaggtggc
    14641 ggaatatgca gatggtattg gtccggatta ccatatgttg attgaggaga catcgcagcc
    14701 gggtaatatc aaactcactg gcatggtgca agatgctcag cagaataaac tggtagtgca
    14761 tccttatacc gtgcggtcag ataaactgcc tgaatacact cctgatgtga atcagttata
    14821 tgatgctctg tataacaaag cgggtgtaaa tgggctgttt actgatttcc ctgataaggc
    14881 agtaaaattt cttaataaag agtaatgtta ctgcaggatg gcgttcatgc gccatcctgt
    14941 ctcatatcaa atttttccaa tcgccactaa ttgttccatg cacatttgta gtaaaaacag
    15001 tggactgcct tctaccggct tttctttagc cagcaacgaa atctgtcgat agaaagttgg
    15061 ttcgagagga acggaacaca attcacctgc aatgcttttc agcgttaact ctggttgtaa
    15121 ggcgatgcct aatccctgtc gaataaaatt catcgctgta tccgcctgat taaattcaca
    15181 ttttatctgc tgggcgcact attagtggta gtggctggtg gaatctatgc gctgcaaatg
    15241 aagggtaaaa gcggtgtcaa gctagtagtg gcaaaagaaa ttcattaata cgacacgttt
    15301 cattaagatt ttcctcaggt aaccacctat agtcattgtc gttaataaaa acgacaggcg
    15361 atagggtatg gcagtttcag caaagtacga cgaatttaat cactggtggg caacagaggg
    15421 cgactgggtt gaagagccta actatcgccg taatggtatg agcggggtgc aatgcgtcga
    15481 gcgcaacggc aaaaagctgt atgtaaagcg catgacgcat catctgtttc attctgtacg
    15541 ttatccgttc ggccgaccaa cgattgtccg tgaggttgcg gtaattaaat aactggaacg
    15601 ggccggtgtc atcgtgccga agatcgtttt tggtgaagcg gtgaaaattg agggtgaatg
    15661 gcgagcgttg ctggtgactg aagatatggc ggggttcatc agcattgctg actggtatgc
    15721 ccagcatgca gtatcgcctt attctgacga agtacggcaa gccatgttga aagcagtggc
    15781 gctggcgttt aagaaaatgc atagcattaa tcgtcagcat ggctgttgtt atgttcgcca
    15841 tatctatgtg aaaacagaag gtaaggcaga agctggtttt cttgacctgg agaaaagtcg
    15901 tcgccgcttg cgtcgcgata aagcgattaa tcatgacttc cgccagctgg aaaaatatct
    15961 ggagccaatc cccaaagcgg actgggagca ggtgaaagcg tattactacg ccatgtaatc
    16021 gttgtaggcc agataagaca cataagcgtt gtatctggca ctacaaccaa ttcacatctc
    16081 gatttcaata tcgccttttg cccggcaaca acagggcaaa atttcccccg gctgaataaa
    16141 ggctaacggt tcggcaatcc agtcaacttg acctgcaacc aggcgtgtgc gacaggagcc
    16201 gcagtaacct tcgcgacact ggtactcaac cgccacattg tgggattcca gcgctgccag
    16261 aagggaaggg tgttcatcct ggcacagcag ttgtgtgcca gtgatgcgca gggtaacgcg
    16321 ggccatcaga gctggaagtt actcaaatcg tcggtgtcca cttccgagtc aatctgcccg
    16381 accagataag aactgacttc cacttcctgc ggagcaacct gcacgttatc agacaccagc
    16441 caagtgttga tccacgggat cgggttggag cgcgtctgga acggcagatc caaaccgact
    16501 gcctgcatac ggatattggt gatgtattca acgtactggc agagaatgtc tttattcaga
    16561 ccaatcatcg aaccgtcgcg gaacagataa tccgcccagt ctttctcctg ttgagctgcc
    16621 tgaacaaaca ggtcatagca ctcctgctta cactcttcgg caatttccgc catctcagga
    16681 tcgtccgcgc cgctgcgcag cagattcagc atatgctggg tgccggtcag gtgcagggct
    16741 tcgtcgcggg caatcaggcg aataattttg gcgttgcctt ccatcaattc gcgttctgca
    16801 aaggcaaagg aacaagcaaa gctgacgtag aagcggatcg cttccagcgc gttaacgctc
    16861 atcaggcaaa gatacagttt tttcttcagc tcgcgcaggc taacggttac ggttttaccg
    16921 ttaacggtgt gggtgccttc gcccagaagg tgccagtagc tggtcatttc gatcagttca
    16981 tcgtaatagc tggagatccc ttccgcacgt ttctggatct gctcgttggt gacgatatcg
    17041 tcaaacacaa cagacggatc gttaacgata ttacgaatga tatgagtata ggaacgggaa
    17101 tgaatcgttt ctgagaacgc ccaggtttcg acccaggttt ccagttccgg aatagaaata
    17161 agcggcaata gcgccacgtt cggactacga ccctgaatgg aatccagcag cgtctgatat
    17221 ttcaggttgc tgataaaaat gtgtttttcg tgctccggca gcgcctggta atcgatacgg
    17281 tcgcgggaga cgtcaacttc ttccggacgc cagaagaaag agagctgctt ttcgatcagc
    17341 ttttcgaaga tgtcatattt ttgctgatcg tagcgggcca cgttgaccgg ctgaccaaag
    17401 aacatcggtt ctttgagctg atcatttttc gtctgtgaaa aggtggtata tgccatgagt
    17461 gtgtcctgtt gggagtttaa tgccggataa ggcattttac gccgcatcct gtgcctgatg
    17521 cgacgctggc gcgtcttatc aggcctacaa atccgagccg taggccggat aaggcgttca
    17581 cgctgcatcc ggcatctcaa tatcagatct tacatgcgcc gctttcgcag ccatcgtcct
    17641 ggattgacgg taccagatcg tcctgcgcgt cttcagcgcc gtcacgggtg ttctgataat
    17701 acagcgtttt gaccccgaat ttgtaggcgg tgagcaggtc tttcagcaac tgctgcatcg
    17761 gcacttttcc tgacgggaaa cgtgacggat cgtagttggt gttagcagag atcgactgat
    17821 cgataaattt ctgcatgata cctaccagtt gcaggtagcc atcgttaccc ggcatttccc
    17881 acagcagctc ataggcgtcg tgcaggtgct cgtagtccgg caccacctgg cgcaaaatac
    17941 cgtctttcga cgctttgatg ctgacgtaac cgcgcggcgg ttcaataccg ttagtggcgt
    18001 tagagatctg cgaagaggtc tcggacggca tcagggcaga aagcgtggag ttacgcaggc
    18061 cgtgcgtttt gattgattca cgcaatgctt cccagtcgta atgcagcggc tcattagcga
    18121 tggcatccag atctttctta taggtatcga tcggcaggat ccctttcgcg taagtggttt
    18181 cgttaaacca cgggcactcg ccttgctctt tagccagctc attagacgct ttcagcaggt
    18241 aatactgaat cgcttcgaag gttttatgcg tcaggttgtt ggcgctgccg tcggagtagc
    18301 gtttaccgtg cttcgccagg tagtaagcga agttgatcac accaataccc agcgtacgac
    18361 gacccatcgc tccacgtttg gcggccggga tcgggtaatc ctgataatcc agcagcgcgt
    18421 caagtgcacg aaccgccaga attgccagct cttccagttc atccaggtta ttaattgcgc
    18481 ctaggttgaa agcagacagc gtacacagcg cgatttcacc gttctcgtcg ttgacgtcgt
    18541 tcagcggttt ggtcggcagg gctatctcca ggcacaggtt agactgacgc actggcgcga
    18601 tggccggatc aaacgggcta tgggtattac agtggtcaac gttctgaata tagatacgac
    18661 cggtagacgc acgttcctgc atcatcagcg agaacagctc aacggctttc acacgctgct
    18721 tgcggatgct gtcgtctttc tcatatttgg tatacagacg ttcaaactct tcctgatcgg
    18781 cgaagaacgc gtcgtacagc cccggtacgt cggacgggct gaacagggtg atatcttcac
    18841 ctttcagcag acgggtatac atcagtttgt tgatttgtac cccgtagtcc atatgacgca
    18901 cgcggttgcc ttccacacca cggttgtttt tcaacaccag caggctttcc acttccagat
    18961 gccacatcgg gtagaacagc gttgccgcac cgccgcgcac accgccctga gagcaggatt
    19021 tcaccgctgt ctggaaatgt ttgtagaacg gaatgcagcc ggtatggaac gcttcaccac
    19081 cgcgaatcgg gctacccagc gcacgaatac gcccggcgtt gatgccgatc ccggcacgct
    19141 gggaaacgta tttaacaatc gcgctggagg tggcgttgat ggaatccagg ctgtcaccgc
    19201 actcgatcag tacgcaggag ctgaactgac gagtcggggt acgcacgccg gacatgattg
    19261 gcgtcggcag cgaaatttta aatgtggaaa ccgcgtcgta aaaacgcttc acatattgca
    19321 ggcgcgtttc acgcgggtag ttcgagaaca ggcacgcggc aaccagaata taaaggaact
    19381 gggcgctctc atagatttcg ccggtcacgc ggttctgtac cagatatttg ccttccagct
    19441 gcttaacggc agcataagag aaggtcatat cacggtcgtg atcgataaac gtgtccatct
    19501 gcttgaactc ttcttccgtg tagtcttcca gcagatgatt atcgtatttg cccatctcga
    19561 ccattttcac cacgtggtcg tacagcgcag gcggctcaaa ctggccgtag gcttttttac
    19621 gcaggtggaa gatcgccagg cgcgcggcga gatactgata atccggcgca tcacgggaga
    19681 tcaggtctgc ggcagccttg ataatggttt cgtggatgtc agaggtcttg ataccgtcat
    19741 aaaactgaat gtgggagcgc agctcgacct gggaaatcga aacgttatgc agtccttctg
    19801 ccgcccaatc cagaacgcga tggattttgt cgagattgat gcgctctgtg ctaccgtcgc
    19861 gctttgtcac cagcagattc tgattcatgt atgtcgtacc tgtttttgga attctttccg
    19921 caatagtttc atgcagacta cctgtagtac gggaagctgc ttagaacact atatataggg
    19981 ggtatgtttg ggattcactg caagatagtg tgaaaatggc cctcttgcaa gtgcataact
    20041 ttgtggataa ctcaggaagg aaaaagtggc tttcgcgcac cttaggtcag acaaggtgtc
    20101 cgggaaagtc aatgggaaga gaaaaatttg ttaaaaataa ctgttcggcg atttcttgaa
    20161 cggcagaata ggttggataa attgatatag atggtttatt aatctttttg ctaatgattg
    20221 caaaaattga tctaagcacg agtcatcaca taatctgatg tatcagttgt ggtcaatata
    20281 taagcgaatg taagcgattg ttgatgtcga aatggttgtt ttctattcgg ttattgttaa
    20341 atgcgaagcc attttgttaa tttaccttat attataaaaa aattattcat tactttaatt
    20401 tagtttaaat ataactggta tcccttaagg ttattaactt gaattatgac gcactgatat
    20461 tattcatcaa ataataacaa aatagccatt gcatcgggtt ggacaattta caaaagaaag
    20521 ataacccata ttgtataatg cgtttaaata tgccgtctta tataaaatga tggtcagatt
    20581 aatatgcgga ttatctttct acg
//
LOCUS       DADMJE010000063        20572 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.064, whole genome shotgun sequence.
ACCESSION   DADMJE010000063 DADMJE010000000
VERSION     DADMJE010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20572)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20572)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20572
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.064"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            144..347
                     /locus_tag="JN001_002079"
     CDS             144..347
                     /locus_tag="JN001_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000051842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AaeX family protein"
                     /protein_id="HAY9053312.1"
                     /translation="MSLFPVIVVFGLSFPPIFFELLLSLAIFWLVRRVLVPTGIYDFV
                     WHPALFNTALYCCLFYLISRLFV"
     gene            355..1287
                     /gene="aaeA"
                     /locus_tag="JN001_002080"
                     /pseudo
     CDS             355..1287
                     /gene="aaeA"
                     /locus_tag="JN001_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417708.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeA"
     gene            1293..3260
                     /gene="aaeB"
                     /locus_tag="JN001_002081"
     CDS             1293..3260
                     /gene="aaeB"
                     /locus_tag="JN001_002081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="p-hydroxybenzoic acid efflux pump subunit AaeB"
                     /protein_id="HAY9053313.1"
                     /translation="MGIFSIANQHIRFAVKLATAIVLALFVGFHFQLETPRWAVLTAA
                     IVAAGPAFAAGGEPYSGAIRYRGFLRIIGTFIGCIAGLVIIIAMIRAPLLMILVCCIW
                     AGFCTWISSLVRIENSYAWGLAGYTALIIVITIQPEPLLTPQFAVERCSEIVIGIVCA
                     IIADLLFSPRSIKQEVDRELESLLVAQYQLMQLCIKHGDGEVVDKAWGDLVRRTTGLQ
                     GMRSNLNMESSRWARANRRLKAINTLSLTLITQSCETYLIQNTRPELITDTFREFFDT
                     PVETAQDVHKQLKRLRRVIAWTGERETPVTIYSWVAAATRYQLLKRGVISNTKINATE
                     EEILQGEPEVKVESAERHHAMVNFWRTTLSCILGTLFWLWTGWTSGSGAMVMIAVVTS
                     LAMRLPNPRMVAIDFIYGTLAALPLGLLYFLVIIPNTQQSMLLLCISLAVLGFFLGIE
                     VQQRLLGSMGALASTINIIVLDNPMTFHFSQFLDSALGQIVGCVLAFTVILLVRDKSR
                     DRTGRVLLNQFVSAAVSAMTTNVARRKENHLPALYQQLFLLMNKFPGDLPKFRLALTM
                     IIAHQRLRDAPIPVNEDLSAFHRQMRRTADHVISARSDDKRRRYFGQLLEELEIYQEK
                     LRIWQAPPQVTEPVHRLAGMLHKYQHALTDS"
     gene            3352..3624
                     /locus_tag="JN001_002082"
     CDS             3352..3624
                     /locus_tag="JN001_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053314.1"
                     /translation="MNIYTFDFDEIESQEDFYRDFSQTFGLAKDKVRDLDSLWDVLMN
                     DVLPLPLEIEFVHLGEKTRRRFGALILLFDEAEEELEGHLRFNVRH"
     gene            complement(3680..3943)
                     /gene="yhcN"
                     /locus_tag="JN001_002083"
     CDS             complement(3680..3943)
                     /gene="yhcN"
                     /locus_tag="JN001_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417705.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid stress response protein YhcN"
                     /protein_id="HAY9053315.1"
                     /translation="MKIKTTVAALSVLSVLSFGAFAADSIDAAQAQNREAIGTVSVSG
                     VASSPMDMREMLNKKAEEKGATAYQITEARSGDTWHATAELYK"
     gene            complement(4309..4779)
                     /gene="argR"
                     /locus_tag="JN001_002084"
     CDS             complement(4309..4779)
                     /gene="argR"
                     /locus_tag="JN001_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001257852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HAY9053316.1"
                     /translation="MRSSAKQEELVKAFKALLKEEKFSSQGEIVAALQEQGFDNINQS
                     KVSRMLTKFGAVRTRNAKMEMVYCLPAELGVPTTSSPLKNLVLDIDYNDAVVVIHTSP
                     GAAQLIARLLDSLGKAEGILGTIAGDDTIFTTPANGFTVKDLYEAILELFDQEL"
     gene            5214..6152
                     /gene="mdh"
                     /locus_tag="JN001_002085"
     CDS             5214..6152
                     /gene="mdh"
                     /locus_tag="JN001_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000861594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HAY9053317.1"
                     /translation="MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV
                     DLSHIPTAVKIKGFSGEDATPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLV
                     QQVAKTCPKACIGIITNPVNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAE
                     LKGKQPGEVEVPVIGGHSGVTILPLLSQVPGVSFTEQEVADLTKRIQNAGTEVVEAKA
                     GGGSATLSMGQAAARFGLSLVRALQGEQGVVECAYVEGDGQYARFFSQPLLLGKNGVE
                     ERKSIGTLSAFEQNALEGMLDTLKKDIALGEEFVNK"
     gene            complement(6215..7282)
                     /gene="degS"
                     /locus_tag="JN001_002086"
     CDS             complement(6215..7282)
                     /gene="degS"
                     /locus_tag="JN001_002086"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane-stress sensor serine
                     endopeptidase DegS"
                     /protein_id="HAY9053318.1"
                     /translation="MFVKLLRSVAIGLIVGAILLVAMPSLRSLNPLSTPQFDSTDETP
                     ASYNLAVRRAAPAVVNVYNRGVNTNSHNQLEIRTLGSGVIMDQRGYIITNKHVINDAD
                     QIIVALQDGRVFEALLVGSDSLTDLAVLKINATGGLPTIPINARRVPHIGDVVLAIGN
                     PYNLGQTITQGIISATGRIGLNPTGRQNFLQTDASINHGNSGGALVNSLGELMGINTL
                     SFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQSGGI
                     DQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVV
                     VMRDDKQLTLQVTIQEYPATN"
     gene            complement(7372..8739)
                     /gene="degQ"
                     /locus_tag="JN001_002087"
     CDS             complement(7372..8739)
                     /gene="degQ"
                     /locus_tag="JN001_002087"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine endoprotease DegQ"
                     /protein_id="HAY9053319.1"
                     /translation="MKKQTQLLSALALSVGLTLSASFQAVASIPGQVADQAPLPSLAP
                     MLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKG
                     YVLTNNHVINQAQKISIQLNDGREFDAKLIGSDDQSDIALLQIQNPSKLTQIAIADSD
                     KLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGLNLEGLENFIQTDASINRGNSGGAL
                     LNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM
                     SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIAT
                     TEPGTKVKLGLLRNGKPLEVEVTLDTSTSSSASAEMITPALEGATLSDGQLKDCGKGI
                     KIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAAKPAIIALQIVRGNESI
                     YLLMR"
     gene            complement(8893..9291)
                     /locus_tag="JN001_002088"
     CDS             complement(8893..9291)
                     /locus_tag="JN001_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1043 family protein"
                     /protein_id="HAY9053320.1"
                     /translation="MTWEYALIGLVVGIIIGAVAMRFGNRKLRQQQALQYELEKNKAE
                     LDEYREELVSHFARSAELLDTMAHDYRQLYQHMAKSSSSLLPELSAEANPFRNRLAES
                     EASNDQAPVQMPRDYSEGASGLLRTGAKRD"
     gene            9485..10612
                     /locus_tag="JN001_002089"
     CDS             9485..10612
                     /locus_tag="JN001_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapE"
                     /protein_id="HAY9053321.1"
                     /translation="MQSVTPTSQYLKALNEGSHQPDDVQKEAVSRLEIIYQELINSRP
                     PAPRTSGLMARVGKLWGKREDTKHTPVRGLYMWGGVGRGKTWLMDLFYQSLPGERKQR
                     LHFHRFMLRVHEELTALQGQTDPLEIIADRFKAETDVLCFDEFFVSDITDAMLLGGLM
                     KALFARGITLVATSNIPPDELYRNGLQRARFLPAIDAIKQHCDVMNVDAGVDYRLRTL
                     TQAHLWLSPLHDETRAQMDKLWLALAGAKRENSPTLEINHRPLATMGAENQTLAVSFT
                     TLCVDARSQHDYIALSRLFHTVMLFDVPVMTRLMESEARRFIALVDEFYERHVKLVVS
                     AEVPLYEIYQGDRLKFEFQRCLSRLQEMQSEEYLKREHLAG"
     gene            10830..11258
                     /gene="rplM"
                     /locus_tag="JN001_002090"
     CDS             10830..11258
                     /gene="rplM"
                     /locus_tag="JN001_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HAY9053322.1"
                     /translation="MKTFTAKPETVKRDWYVVDATGKTLGRLATELARRLRGKHKAEY
                     TPHVDTGDYIIVLNADKVAVTGNKCTDKVYYHHTGHIGGIKQATFEEMIARRPERVIE
                     IAVKGMLPKGPLGRAMFRKLKVYAGNEHNHAAQQPQVLDI"
     gene            11274..11666
                     /gene="rpsI"
                     /locus_tag="JN001_002091"
     CDS             11274..11666
                     /gene="rpsI"
                     /locus_tag="JN001_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HAY9053323.1"
                     /translation="MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETA
                     RMVVRQPLELVDMVEKLDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAG
                     FVTRDARQVERKKVGLRKARRRPQFSKR"
     gene            12061..12699
                     /gene="sspA"
                     /locus_tag="JN001_002092"
     CDS             12061..12699
                     /gene="sspA"
                     /locus_tag="JN001_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stringent starvation protein A"
                     /protein_id="HAY9053324.1"
                     /translation="MAVAANKRSVMTLFSGPTDIYSHQVRIVLAEKGVSFEIEHVEKD
                     NPPQDLIDLNPNQSVPTLVDRELTLWESRIIMEYLDERFPHPPLMPVYPVARGESRLY
                     MHRIEKDWYTLMNTIINGSASEADAARKQLREELLAIAPVFGQKPYFLSDEFSLVDCY
                     LAPLLWRLPQLGIEFSGPGAKELKGYMTRVFERDSFLASLTEAEREMRLGRS"
     gene            12705..13202
                     /gene="sspB"
                     /locus_tag="JN001_002093"
     CDS             12705..13202
                     /gene="sspB"
                     /locus_tag="JN001_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor"
                     /protein_id="HAY9053325.1"
                     /translation="MDLSQLTPRRPYLLRAFYEWLLDNQLTPHLVVDVTLPGVQVPME
                     YARDGQIVLNIAPRAVGNLELANDEVRFNARFGGIPRQVSVPLAAVLAIYARENGAGT
                     MFEPEAAYDEDTSIMNDEEASADNETVMSVIDGDKPDHDDDTHPDDEPPQPPRGGRPA
                     LRVVK"
     gene            complement(13245..14611)
                     /gene="dcuC"
                     /locus_tag="JN001_002094"
                     /pseudo
     CDS             complement(13245..14611)
                     /gene="dcuC"
                     /locus_tag="JN001_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417694.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter DcuC"
     gene            14991..15782
                     /gene="nanR"
                     /locus_tag="JN001_002095"
     CDS             14991..15782
                     /gene="nanR"
                     /locus_tag="JN001_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417693.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NanR"
                     /protein_id="HAY9053326.1"
                     /translation="MGLMNAFDSQTEDSSPAIGRNLRSRPLARKKLSEMVEEELEQMI
                     RRREFGEGEQLPSERELMAFFNVGRPSVREALAALKRKGLVQINNGERARVSRPSADT
                     IIGELSGMAKDFLSHPGGIAHFEQLRLFFESSLVRYAAEHATDEQIDLLAKALEINSQ
                     SLDNNAAFIRSDVDFHRVLAEIPGNPIFMAIHVALLDWLIAARPTVTDQALHEHNNVS
                     YQQHIAIVDAIRRHDPDEADRALQSHLNSVSATWHAFGQTTNKKK"
     gene            15904..16797
                     /gene="nanA"
                     /locus_tag="JN001_002096"
     CDS             15904..16797
                     /gene="nanA"
                     /locus_tag="JN001_002096"
                     /EC_number="4.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate lyase"
                     /protein_id="HAY9053327.1"
                     /translation="MATNLRGVMAALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYV
                     GGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDA
                     VSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG
                     VGALKQTSGDLYQMEQIRREHPDLVLYNGYDEIFASGLLAGADGGIGSTYNIMGWRYQ
                     GIVKALKEGDIQTAQKLQTECNKVIDLLIKTGVFRGLKTVLHYMDVVSVPLCRKPFGP
                     VDEKYLPELKALAQQLMQERG"
     gene            16906..18396
                     /gene="nanT"
                     /locus_tag="JN001_002097"
     CDS             16906..18396
                     /gene="nanT"
                     /locus_tag="JN001_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312124.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialic acid transporter NanT"
                     /protein_id="HAY9053328.1"
                     /translation="MSTTTQNIPWYRHLNRAQWRAFSAAWLGYLLDGFDFVLIALVLT
                     EVQGEFGLTTVQAASLISAAFISRWFGGLMLGAMGDRYGRRLAMVTSIVLFSAGTLAC
                     GFAPGYITMFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSVGAVVA
                     AQVYSLVVPVWGWRALFFIGILPIIFALWLRKNIPEAEDWKEKHAGKAPVRTMVDILY
                     RGEHRIANIVMTLAAATALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSTGKRWPT
                     GVMLMVVVLFAFLYSWPIQALLPTYLKTDLAYNPHTVANVLFFSGFGAAVGCCVSGFL
                     GDWLGTRKAYVCSLLASQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGIAGILPKLIG
                     GYFDTDQRAAGLGFTYNVGALGGALAPIIGALIAQRLDLGTALASLSFSLTFVVILLI
                     GLDMPSRVQRWLRPEALRTHDAIDGKPFSGAVPFGSAKNDLVKTKS"
     gene            18444..19133
                     /locus_tag="JN001_002098"
     CDS             18444..19133
                     /locus_tag="JN001_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HAY9053329.1"
                     /translation="MSLLAQLDQKIAANGGLIVSCQPVPDSPLDKPEIVAAMALAAEQ
                     AGAVAIRIEGVANLQATRAVVSVPIIGIVKRDLEDSPVRITAYIEDVDALAQAGADII
                     AIDGTDRPRPVPVETLLARIHHHGLLAMTDCSTPEDGLACQKLGAEIIGTTLSGYTTP
                     ETPEEPDLALVKTLSDAGCRVIAEGRYNTPAQAADAMRHGAWAVTVGSAITRLEHICQ
                     WYNTAMKKAVL"
     gene            19130..20005
                     /locus_tag="JN001_002099"
     CDS             19130..20005
                     /locus_tag="JN001_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312122.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine kinase"
                     /protein_id="HAY9053330.1"
                     /translation="MTTLAIDIGGTKLAAALIGADGQIRDRRELPTPASQTPQALRDA
                     LAALVAPLQAHAQQVAIASTGIIRDGSLLALNPHNLGGLLHFPLVKTLEQLSNLPTIA
                     INDAQAAAWAEYQALEGDITDMVFITVSTGVGGGVVSGGKLLTGPGGLAGHIGHTLAD
                     PHGPVCGCGRTGCVEAIASGRGIAAAAQGELMGADARTIFTRAGQGDEQAQQLIHRSA
                     HVLARLIADIKATTDCQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHD
                     AGLLGAALLAQGEKL"
     gene            20002..20466
                     /locus_tag="JN001_002100"
     CDS             20002..20466
                     /locus_tag="JN001_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
                     /protein_id="HAY9053331.1"
                     /translation="MMMGEVQSLPSAGLHPALQDALTLALAARPQEKAPGRYELQGDN
                     IFMNVMTFNTQSPVEKKAELHEQYIDIQLLLNGEERILFGMAGTARQCEEFHHEDDYQ
                     LCSTIDNEQAIILKPGMFAVFMPSEPHKPGCVVGEPGEIKKVVVKVKADLMA"
BASE COUNT         4948 a         5114 c         5364 g         5146 t
ORIGIN      
        1 tagataacag cataacagtt acgctaatat attaaatatc aatctacagc aatgttgctc
       61 tcgcccggct ttccatgccc ttctctgcgg cgacagatgc tgaaaataat aacgcctgct
      121 ctctctatac aaccaaggtc aacatgagtc tgtttcccgt tatcgtggtg tttgggctgt
      181 ccttcccacc gatatttttt gaattgcttt tatcactggc gattttctgg ctggtgcgcc
      241 gggtacttgt gccaacaggt atctacgact ttgtctggca tccggcgttg ttcaacaccg
      301 cgctctattg ctgcttgttt tatttgatat cgcgactgtt cgtttgaggt tgaagtgaaa
      361 acactaataa gaaaattctc ccgtacggcc atcacggtcg tattagtcat tctggccttc
      421 atcgcaattt ttaatgcctg ggtctattac accgaatccc cctggacgcg tgacgcgcgc
      481 tttagcgctg acgtcattgc gatcgcgccg gacgtttctg gactcattac ccaggtgaat
      541 gttcatgata accagctggt gaaaaaagga cagatactgt tcaccatcga ccagccgcgc
      601 tatcaaaagg cgcttgagga agcgcaagcc gatgttgctt attatcaggt actggcacag
      661 gagaaacgcc aggaggccgg acgtcgtaac cgtctcggtg tgcaggcgat gtctcgcgaa
      721 gagatcgact aggctaacaa cgtactacaa acggttctgc atcagttagc gaaagcgcag
      781 gcgacccgcg atctggcaaa actggatctt gaacgcacgg tgatccgcgc gccagcagat
      841 ggctgggtga ccaacctcaa cgtctatacc ggtgagttta ttactcgagg atcaacggcg
      901 gttgcgctgg tgaaacagaa ctccttctat gtactggcct atatggaaga aactaagctg
      961 gaaggggtgc gtccggggta tcgtgcagag atcacgccgc ttggcagtaa caaagtgctg
     1021 aaagggactg ttgatagtgt tgccgcaggg gtcaccaacg ccagcagcac gcgtgacgac
     1081 aaagggatgg cgactataga ctctaacctt gaatgggtgc gtcttgcgca acgtgttccg
     1141 gttcgtattc gtctcgacaa ccagcaagag aacatctggc ctgcgggcac cactgctaca
     1201 gtggtggtca ctggcaaaca agatcgcgac gaaagccagg attcgttctt ccgtaaaatg
     1261 gcccatcgcc tgcgtgagtt tggttaatca cgatgggtat tttctccatt gctaaccaac
     1321 atattcgctt tgcggtaaaa ctggcgaccg ccattgtact ggcgctgttt gttggctttc
     1381 acttccagct ggaaacgcca cgctgggcgg tactgacagc ggcgattgtt gccgccggtc
     1441 cggcctttgc tgcgggaggt gaaccgtatt ctggcgctat tcgttatcgt ggctttttgc
     1501 gcatcatcgg cacatttatt ggctgtattg ccggactggt gatcatcatt gcgatgatcc
     1561 gcgcaccatt attgatgatt ctggtgtgct gtatctgggc cggtttttgt acctggatat
     1621 cctcgctggt acgaatagaa aactcgtacg cgtgggggct ggccggttat accgcgctga
     1681 tcattgtgat caccattcag ccggaaccat tgcttacgcc gcagtttgcc gtcgaacgtt
     1741 gtagcgagat cgttatcggt attgtgtgtg cgattatagc ggatttgctc ttttctccgc
     1801 gatcgatcaa acaagaagtg gatcgagagc tggaaagttt gctggtcgcg caatatcaat
     1861 taatgcaact ctgtatcaag catggcgatg gtgaagttgt cgataaagcc tggggcgacc
     1921 tggtgcgacg caccacgggg ctacaaggca tgcgcagcaa cctgaatatg gaatcttccc
     1981 gctgggcgcg ggccaatcga cgtttaaaag cgatcaatac gctatcgctg acgctgatta
     2041 cccaatcctg cgaaacttat cttattcaga atacgcgccc ggaattgatc actgatactt
     2101 tccgcgaatt ttttgacacg ccggtagaaa ccgcgcagga cgtccacaag cagctcaaac
     2161 gcctgcggag agttatcgcc tggaccgggg aacgggaaac gcctgtcacc atttatagct
     2221 gggtcgcggc ggcaacgcgt tatcagcttc tcaagcgcgg cgttatcagt aacacaaaaa
     2281 tcaacgccac cgaagaagag atcctgcaag gcgaaccgga agtcaaagta gagtcagccg
     2341 aacgtcatca tgcgatggtt aacttctggc gaaccacact ttcctgcatt ctgggcacgc
     2401 ttttctggct gtggacgggc tggacttccg gcagtggtgc aatggtgatg attgcggtag
     2461 tgacgtcact ggcaatgcgt ttgccgaatc cacgcatggt ggcgatcgac tttatctacg
     2521 ggacgctggc cgcgctgccg ttagggctgc tctacttttt ggtgattatc cctaataccc
     2581 aacagagcat gttgctgctg tgtattagcc tggcagtgct gggatttttc ctcggtatag
     2641 aagtacagca acggctactg ggctcgatgg gggcgctggc cagcaccata aatattatcg
     2701 tgctggataa cccgatgact ttccatttca gtcagtttct cgacagcgca ttagggcaaa
     2761 tcgtcggctg tgtgctcgcg ttcaccgtta ttttgcttgt gcgggataaa tcgcgcgaca
     2821 ggaccggacg tgtactgctt aatcagtttg tttctgccgc tgtttccgcg atgactacca
     2881 atgtggcacg tcgtaaagag aaccacctcc cggcacttta tcagcagctg tttttgctga
     2941 tgaataagtt cccaggggat ttgccgaaat ttcgcctggc gctgacgatg attatcgcgc
     3001 accagcgcct gcgtgatgcg ccgatcccgg ttaacgagga tttatcggcg tttcaccgac
     3061 aaatgcgccg cacagcagac catgtgatat ctgcccgtag cgatgataaa cgtcgtcggt
     3121 actttggcca gttgctggaa gaacttgaaa tctaccagga aaagctacgc atctggcaag
     3181 cgccaccgca ggtgacggaa ccggttcatc ggctggcggg tatgctccat aagtatcaac
     3241 atgcgttgac cgatagttag gtcaaaacca acgccaaaag tgtcggtttt ttcatggcta
     3301 tacttagcga tgcacggcag aactcgccgc gaaacgtgac ggtggcaata gatgaatatt
     3361 tatacctttg attttgatga gattgagagt caggaggatt tttatcgtga ctttagccaa
     3421 acctttggtc tggcgaaaga taaggtacgc gatctcgact cactatggga tgtgttaatg
     3481 aacgatgtcc tgccgctacc acttgagatt gaatttgttc atctgggaga gaaaacgcgt
     3541 cgccgttttg gcgcgttaat attgctgttt gatgaggcag aggaagagct ggaagggcat
     3601 ttgcgtttta atgttcgtca ttagcgcaaa aaaaagcccc cgaaccgggg gcaatatcgt
     3661 cggacaagac gatgagggtt tatttgtaca gttcagccgt agcgtgccag gtgtcaccgc
     3721 tacgagcttc agtaatctgg taggccgttg cgcctttctc ttccgctttt ttgttcagca
     3781 tttcacgcat atccattggc gaagacgcca caccacttac ggatacggtc ccgattgctt
     3841 cacgattttg tgcttgtgca gcatcaatgg agtcggcagc gaatgcaccg aaagagagaa
     3901 cagaaagtac gcttaatgca gctacagtgg ttttgatttt catgattttt acctcgacat
     3961 aatcttttag ctgggccttt gttttgtgac ccatatcaca aaatcaagca tacactaatt
     4021 actgaactaa ttaataccac gctaactgtt tcagttgata ctaagtgtta aaaatgtgaa
     4081 ttttaataac gaaaaagaat taaaaacacg gtcatttatt tttaattcta gtattttcaa
     4141 ttagataatg aattttgcat aatgtgcttt ttttaccgta tgtattcatt atgtgaatga
     4201 catgtcgcag taaaactgca ctattcgtta aattaatcgc aggggaaagc agggggttga
     4261 gagggataag caacattttc cccgccgcca gaagcgacgg ggcagagatt aaagctcctg
     4321 gtcgaacagc tctaaaatcg cttcgtacag gtctttgacg gtgaaaccgt tagcaggggt
     4381 ggtaaagatg gtgtcatcgc cagcgatggt gcccagaata ccttctgctt tgcccagtga
     4441 gtccagcagg cgagcaatta actgcgccgc gccagggctg gtatgaatca cgacaactgc
     4501 atcgttgtag tcgatatcca gcaccagatt cttcaatgga ctggaggtgg ttggtacacc
     4561 cagttcagct ggcaggcagt aaaccatttc cattttggca ttgcgtgtac gtacagcacc
     4621 aaacttggtc aacatccgcg agactttaga ctgattaata ttgtcaaagc cttgctcctg
     4681 caacgcggcg acgatttcgc cctgggagct aaatttctct tctttaagta atgctttaaa
     4741 tgctttaact agttcttctt gcttagccga gcttcgcata agtcacccga tatggtggtt
     4801 gatacaacat tattgtgcat acagatgaat ttttatgcaa acagtcaacc ctgaagaagg
     4861 ctgaaataat gttatgaaag agcgggattt tatcaaattt cgttattgag aaacatgcct
     4921 gcgtcacggc atgcaaattc tgcttaaaag taaattaatt gttatcaaat tgatgttgtt
     4981 ttggctgaac ggtagggtat attgtcacca cctgttggaa tgttgcgcta atgcataagc
     5041 gactgttaat tacgtaagtt aggttcctga ttacggcaat taaatgcata aacgctaaac
     5101 ttgcgtgact acacattctt gatatgtggt cattgtaaac ggcaattttg tggattaagg
     5161 tcgcggcagc ggagcaacat atcttagttt atcaatataa taaggagttt aggatgaaag
     5221 tcgcagtcct cggcgctgct ggcggtattg gccaggcgct tgcactactg ttaaaaaccc
     5281 aactgccttc aggttcagaa ctctctctgt atgatatcgc tccagtgact cccggtgtgg
     5341 ctgtcgatct gagccatatc cctactgctg tgaaaatcaa aggtttttct ggtgaagatg
     5401 cgactccggc gctggaaggc gcagatgtcg ttcttatctc tgcaggtgta gcgcgtaaac
     5461 cgggtatgga tcgttccgac ctgtttaacg ttaacgccgg catcgtgaaa aacctggtac
     5521 agcaagttgc gaaaacctgc ccgaaagcgt gcattggtat tatcactaac ccggttaaca
     5581 ccacagttgc aattgctgct gaagtgctga aaaaagccgg tgtttatgac aaaaacaaac
     5641 tgttcggcgt taccacgctg gatatcattc gttccaacac ctttgttgcg gaactgaaag
     5701 gcaaacagcc aggcgaagtt gaagtgccgg ttattggcgg tcactctggt gttaccattc
     5761 tgccgctgct gtcacaggtt cctggcgtta gttttaccga gcaggaagtg gctgatctga
     5821 ccaaacgtat ccagaacgcg ggtactgagg tggttgaagc gaaagccggt ggcgggtctg
     5881 caaccctgtc tatgggccag gcagctgcac gttttggtct gtctctggtt cgtgcactgc
     5941 agggcgaaca aggcgttgtc gaatgtgcct acgttgaagg cgacggtcag tacgcccgtt
     6001 tcttctctca accgctgctg ctgggtaaaa acggcgtgga agagcgtaaa tctatcggta
     6061 ccctgagcgc atttgaacag aacgcgctgg aaggtatgct ggatacgctc aagaaagata
     6121 tcgccctggg cgaagagttc gttaataagt aattgattag cgaataataa aaaaccggag
     6181 cacagactcc ggttttttgt tttgagcact cgacttaatt ggttgccgga tattcctgaa
     6241 tggtgacctg cagcgttaac tgcttatcat cacgcatcac tacaaccggg atcaccgaac
     6301 cagggcgaat ttctgccacc tgatccatcg tctccagagc agagatggcc ggtttgttat
     6361 ccaccgaaat aatcagatcg ttgacctgaa tacccgcatt cgccgccggg ccgtcaggtg
     6421 acacttcatt aaccacgatc ccttgcagtt gatctatacc accgctctgc gcgtgcagtg
     6481 gtgcgatctc acgtccacca atgccaatgt agccgcggat cacgcgccca tcgcggatca
     6541 gcttatccat aattttggtt gctaactgga aaggaatcgc aaagccgata ccttccggcg
     6601 tttcgccatc gttactctta tcaaacgaca gcgtgttaat gcccatcagt tctcccagcg
     6661 agttcaccag cgcgccgcca gagttaccgt ggttaatgga agcatcggtt tgtaggaagt
     6721 tttgccgccc ggtagggttc agaccgattc gccccgtggc actaataatc ccttgggtaa
     6781 tggtctgccc gaggttgtac gggttaccga tcgccagtac tacgtcgcca atgtgcggta
     6841 cgcgacgtgc attaattgga atggtaggta aaccgccagt ggcattaatt ttaagtaccg
     6901 ccagatcggt tagagagtca gatcccacca gcaatgcttc aaatacacgt ccatcctgta
     6961 aggcgacgat gatctgatcg gcgtcgttga tgacgtgttt attggtgatg atataaccgc
     7021 gttgatccat gattacaccg gatcccaggg tgcggatctc aagctggttg tgagagttgg
     7081 tgttcacacc acggttgtaa acgttaacca ccgctggcgc ggcgcggcga accgccagat
     7141 tatagctggc aggcgtctca tcggtactgt caaattgcgg agtggaaagc gggttaaggc
     7201 tgcgcagcga aggcatggca accagcagaa tagcgccgac aattaatcca atcgcaacgg
     7261 aacgtaagag cttcacaaac atgatggagg cgtcattaaa aaagggaacg gcagcagcat
     7321 accacgagtt aaccggacat cacacgtaag cctgatgccc ggtttacgac attaacgcat
     7381 cagcagatag atgctttcat tgccgcgtac aatttgcagg gcgatgatgg ccggttttgc
     7441 cgccagcact ttacgcattt cagcaatcga gttcacccga tcgcggttga cgccaatgat
     7501 cacatcgtct ttttgcaagc ctgcctgagc agctgggctt cctttgacaa cttcatcgat
     7561 cttaatacct ttgccgcaat cttttagctg accatcgctc aacgttgcac cttccagcgc
     7621 tggcgtgatc atttcagcgc tggccgacga agaggtgctg gtatcaagcg tcacttctac
     7681 ttccagtggt ttgccgttac gcagcaggcc aagcttcact ttcgtgcccg gctctgtagt
     7741 cgcgatacga gagcgcaact cagcaaagct attcagcggt ttgccgttga ggctggtaat
     7801 aatatcgccc gctttgacgc ccgcttttgc cgagccagaa cctggcaaca cttcgctgac
     7861 aaacgcgcca cgctgcacgt caaggttgaa ggctttggcg atatcggcac tcatctcggt
     7921 gcctttgatg cctaacaaac cgcgtttgat ttcaccaaag tcgataagct gctgcgccag
     7981 tgttcgcgcc atattactgg ggatggcaaa tccaatcccg acgctcccgc cgccaggcgc
     8041 aaggattgca gtgttgatgc caattaactc accgttaagg tttaatagtg caccgccgga
     8101 gttaccgcgg ttaatggaag catctgtctg gataaagttt tccagacctt caagattcaa
     8161 cccgctgcgg cctaatgcgg aaacaatgcc agaggtggcg gtttgcccaa ggccaaatgg
     8221 gttaccgacc gctacggcaa aatcaccgac gcgcaattta tcggagtcgg caatagcgat
     8281 ttgcgttaat ttgctcgggt tttgaatttg taacagggcg atatcgctct ggtcatcgct
     8341 accaatcagt tttgcatcaa actcgcgccc atcattgagc tgaatactga ttttctgtgc
     8401 ctgattaatc acatggttgt tggtcagcac atagccttta ctggcgttga tgatgacacc
     8461 ggaacctaaa ccttcgaagg gttgtgcagg ttgatccggt aaatcatcac caaaaaactt
     8521 tttgaattct tccgggattt tctgtccctg actggccgtt ccttccaccc gtacgctcac
     8581 cactgccgga agcacttttt ccagcattgg agccagactg gggagagggg cctgatcggc
     8641 aacctggcct ggaatcgacg cgacggcctg aaatgacgcc gagagagtta acccgacact
     8701 taacgctaat gcactcaaca gctgggtttg ttttttcatt attcctgctc tcgtacctga
     8761 atgataagaa aagagattca aaacagtttg atgttattga attttcagac ggctaacaat
     8821 gagacaccag attaaatgat agtcggggag ggagagaaga ggagggcgca atggctgcgc
     8881 ccgaaaaata aattagtcgc gcttcgcgcc agtacgcagc aggccggatg caccttcaga
     8941 atagtcgcga ggcatctgca ccggtgcctg atcgttgctg gcttcagact ctgccagacg
     9001 attacggaac gggtttgctt cagcagacag ttccggcagc aggctgctgg agcttttcgc
     9061 catgtgctga tacagctggc gatagtcgtg cgccatggta tccagtaatt ccgcgctgcg
     9121 ggcaaagtgg ctaaccagct cttcgcgata ctcgtccagt tcagctttat tcttttccag
     9181 ttcgtactgc aacgcctgtt gctggcgtag tttacgatta ccaaaacgca tggccacagc
     9241 accaataatg atgccgacga ctaacccaat tagcgcatat tcccaggtca tgaacatctc
     9301 ccgttgtctt ttgtttccgt agggtgttgg cttcaggctc catgcctacg gctgattatg
     9361 ccactataac cgttaattcc acagaagtgg aatcccgact gcatatcgcg tagtgtagaa
     9421 cggccttttt ttcgtcaacc gtgaacaacg gcgcaccgat tattcaagga ataataataa
     9481 gatcatgcaa agcgttaccc caacatcgca atacctgaag gcgctcaatg aaggcagcca
     9541 tcaacccgac gacgttcaaa aagaggccgt cagccgcctg gaaattattt atcaagaact
     9601 catcaatagc aggccaccag cccccaggac gagtgggcta atggcgcggg tcggtaagct
     9661 gtggggtaaa cgcgaagaca caaagcatac gccagtgcgt ggcttatata tgtggggcgg
     9721 tgtaggacgc gggaaaacct ggctgatgga ccttttctat caaagcctgc cgggagagcg
     9781 gaaacagcgc ctgcactttc accgttttat gctgcgggtg cacgaagagc taactgcctt
     9841 acaggggcag accgatccgc tggaaattat tgccgatcgc tttaaagccg aaactgacgt
     9901 gctctgtttt gacgaatttt ttgtttctga tattaccgac gccatgctac ttggcggtct
     9961 gatgaaagcc ctgttcgccc gcggtattac cctggtagca acgtcaaata ttccgccgga
    10021 cgaactttat cgaaatggct tgcaacgtgc gcgttttctg cctgcaatcg atgccattaa
    10081 acagcattgt gatgtaatga acgtggacgc tggtgttgat tatcgactgc gtacactcac
    10141 tcaggcgcat ctgtggcttt cgccactcca cgatgaaacc cgggcacaaa tggataaact
    10201 atggttggcg ctggcgggag cgaaacgcga aaattcaccg acgttagaaa tcaaccatcg
    10261 accgctggcg acaatgggcg ctgagaatca gacgcttgct gtctctttta ccaccttgtg
    10321 tgtcgatgcc cgcagccagc atgactatat tgcgctctca cgcctctttc atacggtcat
    10381 gttgtttgat gtaccagtta tgacgcggtt gatggagagc gaagcgcggc gctttattgc
    10441 gctggtggat gagttttacg agcgccatgt caaattagtg gtgagtgcag aagtgccgct
    10501 gtatgaaatt tatcagggcg atcggctgaa gtttgagttc cagcgttgcc tgtcacgtct
    10561 gcaagagatg caaagcgaag agtatctgaa gcgcgagcat ttggcgggtt aaaacctgtc
    10621 acaaatcaca aaaaggggtc gatctttgac cccgacttct ctataatcct gcgaccccac
    10681 gttacaagaa agttttttcc caaaactttt tgtgtgctgg cataggctat tcgaaggggt
    10741 aggtttgccg gactttgtcg tgtgaacctc aacaattgaa gacgtttggg tgttcaccaa
    10801 cgtgtaacta tttattgggt aagcttttaa tgaaaacttt tacagctaaa ccagaaaccg
    10861 taaaacgcga ctggtatgtt gttgacgcga ccggtaaaac tctgggccgt ctggctactg
    10921 aactggctcg tcgcctgcgc ggtaagcaca aagcggaata cactccgcac gtagataccg
    10981 gtgattacat catcgttctg aacgctgaca aagttgctgt aaccggcaac aagtgtactg
    11041 acaaagtgta ctatcaccac accggccaca tcggtggtat caaacaagcg acctttgaag
    11101 agatgattgc tcgccgtcct gagcgtgtga ttgaaatcgc ggttaaaggc atgttgccaa
    11161 aaggcccgct gggtcgtgct atgttccgta aactgaaagt ttacgcgggt aacgagcaca
    11221 accacgcggc acagcaaccg caagttcttg acatctaatc gggattatag gcaatggctg
    11281 aaaatcaata ctacggcact ggtcgccgca aaagttccgc agctcgcgtt ttcatcaaac
    11341 cgggcaacgg taaaatcgta atcaaccaac gttctctgga acagtacttc ggtcgtgaaa
    11401 ctgcccgcat ggtagttcgt cagccgctgg aactggtcga catggttgag aaactggacc
    11461 tgtacatcac cgttaaaggt ggtggtatct ctggtcaggc tggtgcgatc cgtcacggta
    11521 tcacccgcgc tctgatggaa tacgacgagt ccctgcgttc tgaactgcgt aaagctggct
    11581 tcgttactcg tgacgctcgt caggttgaac gtaagaaagt cggtctgcgt aaagcacgtc
    11641 gtcgtccgca gttctccaaa cgttaattgg cttctgctcc ggcagaaaac aattttcgaa
    11701 aaaacccgct tcggcgggtt tttttatagc taaaatctga atcagcgtaa aaactggaaa
    11761 gttgcttttt gctgccacct gacagacagg taaaacaaaa accacatcgc caataaggga
    11821 ctaagtcaac tatttcagac taaagcgcat ctctttttcc ccatttccgg catcgactca
    11881 ccacaaaggt cgcaaaatct ggtaaactat catccaattt tctgcccaaa tgtcgggtat
    11941 tgctcatttt ttgtttgatt ttcgaacaaa gagagtcgtt ccttactggg taacacaact
    12001 tctgactggc cacctggtgg ctggtagcag taaaaattct gactatacct ggaggttttc
    12061 atggctgtcg ctgccaacaa acgttcggta atgacgctgt tttccggtcc tactgacatc
    12121 tatagccatc aggtccgcat tgtgctggct gagaaaggtg taagtttcga gatcgaacac
    12181 gtggaaaagg acaatccgcc tcaggatctg attgacctca acccgaatca gagcgttccg
    12241 accctggtgg atcgtgagct gaccctgtgg gaatctcgca tcattatgga atatctggat
    12301 gagcgtttcc cgcatccgcc actgatgcct gtttacccgg tagctcgcgg tgaaagccgt
    12361 ctgtacatgc atcgcatcga aaaagactgg tacacgctga tgaacaccat catcaacggt
    12421 tcagcttctg aagcagatgc cgcacgtaag caactgcgcg aagaactgct ggcgattgcg
    12481 ccggtcttcg gtcagaagcc gtacttcctg agcgatgagt tcagcctggt cgattgctat
    12541 cttgctccgc tgctgtggcg tctgccgcaa ctgggcatcg agttcagcgg cccgggtgcg
    12601 aaagagctga aaggctatat gacccgcgtc tttgagcgtg actctttcct tgcttcttta
    12661 actgaagcag aacgtgaaat gcgtctgggc cggagttaat ctgtatggat ttgtcacagc
    12721 taacaccacg tcgtccctat ctgctgcgtg cattctatga gtggttgctg gataaccagc
    12781 tcacgccgca cctggtggtg gatgtgacgc tccctggcgt gcaggttcct atggaatatg
    12841 cgcgtgacgg gcaaatcgta ctcaacattg cgccgcgtgc tgtcggcaat ctggaactgg
    12901 cgaatgatga ggtgcgcttt aacgcgcgct ttggcggcat tccgcgtcag gtttctgtgc
    12961 cgctggctgc cgtgctggct atctacgccc gtgaaaatgg cgcaggcaca atgtttgagc
    13021 ctgaagctgc ctacgatgaa gataccagca tcatgaatga tgaagaggca tcggcagaca
    13081 acgaaaccgt tatgtcggtt attgatggcg acaagccaga tcacgatgat gacactcatc
    13141 ctgacgatga acctccgcag ccaccacgcg gtggtcgacc ggcattacgc gttgtgaagt
    13201 aatacaaaaa caggccctgg tggcctgttt tgtcttttaa tggcttaata aaatagcgtg
    13261 attgtggcaa tcatattcac cacgaaaccg actgccatgg ggatcgctgt tcgcttcacc
    13321 accgcaaaag gcgaaacgcc tgcaattcct gacgtaacga ccaccaccgc agtaatcggc
    13381 gaaaccgcgc gcgctagcgt cgtggcaaaa tgcatcggca taatcattac aaccgctggt
    13441 acatgtagtc cagctgcgat attcggaata agactggcaa atgacataaa cggcgcattg
    13501 ccagagccca tcacaatggc acaaatggca atgaccagcg ccataataat catcacgcca
    13561 ataccgccca gaccagaatg ctccgcaccc ctgataaccg catcgacagt gccaatcgtc
    13621 gttaagcctt tcgcaaatat ttcacccgcg accaccagcg ttaccacgtt ggcaaactgc
    13681 gtacccatgc cgtcaaaaaa cgcctgcaca tcgtccattg tttcgcgcaa gttatgcttg
    13741 cggaagaact caacaaacat cgtcaccgtc aaactcagta acatcaccac caccagatgc
    13801 agttctgact gcatcagccc gacgtgggcg aggaacagcg agccgagcat caggattaac
    13861 ggcatcacag gtaaaatggc gtaatagagc ggcgggacat tatcgagagc tttttgctct
    13921 gcttgttcgt gattgatatt tttatctttt ttgtcaaaag cgcgttgcac gaaaaagtgg
    13981 gagatcgcca ccgagataat gacgcaagag gcgaccggaa gctggtagtg gaagaagtaa
    14041 gtggcaattt tcattcccgc gacctgggct gcaaaaatgg agttcgtttc cagaattccc
    14101 cactcaatgg acattgtggt tgcgataacc gccaccgcag agagacgact tactcccaga
    14161 ctcaccagtg tcggaaataa ggtgaccatc agcaacatac ccagaccgga ggcgctggta
    14221 ataaactgcg ccatgatttg accgatgacg taagttgccg acagaataat atacggtgag
    14281 cgaatgagtt ttaacgggcg gcttaacaag ctcaccatcg cgcgactggc ccctatgcgc
    14341 tccatgtagc gggcataccg cccaccgcca taatcgatag ccccaatccg gcaatgcggt
    14401 tggacagcat gcgcaggatt tcattataaa tatcgacgat caagtagccg ctgcttttgg
    14461 cgggctcgag tacaccaccg aaccctaacc agacaccgca catcatcagg aagatacctg
    14521 cggcagccag caccacctga ggtttgtagt ttttcaggat caaatagccc atcgtaatta
    14581 atacgatgac agatataatt atgccgaaca ttgttgaact ccgtgtcaaa agaaaacggt
    14641 caatcccata aacggcagat tgaaaacaat gatgttatat tttttgcaag tctatttatg
    14701 gtgcggatgt cgtgttttta attgtaggtg agataatttt tcattaaaaa atatgcgctt
    14761 atgattattt tgcaagaacg cattcataat attcataatg ctcgtgaata gtcttataaa
    14821 taattcaaac gggatgtttt tatctgcgtt acattaattt ttcgcaatag ttaattattc
    14881 cgttaattat ggtaatgatg aggcacaaag agaaaaacct gccattttcc cctactttca
    14941 atcctgtgat aggatgtcac tgatgatgtt aatcacactg accttacaga atgggcctta
    15001 tgaacgcatt tgattcgcaa accgaagatt cttcacctgc aattggtcgc aacttgcgta
    15061 gccgcccgct ggcgcgtaaa aaactctccg aaatggtgga agaagagctg gaacagatga
    15121 tccgccgtcg tgaatttggc gaaggtgaac aattaccgtc tgaacgcgaa ctgatggcgt
    15181 tctttaacgt cgggcgtcct tcggtgcgtg aagcgctggc agcgttaaaa cgcaaaggtc
    15241 tggtgcaaat aaacaacggc gaacgcgctc gcgtctcgcg tccttctgcg gacactatca
    15301 tcggtgagct ttccggcatg gcgaaagatt tcctttctca tcccggtggg attgcccatt
    15361 tcgaacaatt acgtctgttc tttgaatcca gtctggtgcg ctatgcggct gaacatgcca
    15421 ccgatgagca aatcgatttg ctggcaaaag cactggaaat caacagtcag tcgctggata
    15481 acaacgcggc attcattcgt tcagacgttg atttccaccg cgtgctggcg gagatccccg
    15541 gtaacccaat cttcatggcg atccacgttg ccctgctcga ctggcttatt gccgcacgcc
    15601 caacggttac cgatcaggca ctgcacgaac ataacaacgt tagttatcaa cagcatattg
    15661 cgatcgttga tgcgatccgc cgtcatgatc ctgacgaagc cgatcgtgcg ttgcaatcgc
    15721 atctcaacag cgtctctgct acctggcacg ctttcggtca gaccaccaac aaaaagaaat
    15781 aatgccactt tagtgaagca gatcgcatta taagctttct gtatggggtg ttgcttaatt
    15841 gatctggtat aacaggtata aaggtatatc gtttatcaga caagcatcac ttcagaggta
    15901 tttatggcaa cgaatttacg tggcgtaatg gctgcactcc tgactccttt tgaccaacaa
    15961 caagcactgg ataaagcgag tctgcgtcgc ctggttcagt tcaatattca gcagggcatc
    16021 gacggtttat acgtgggtgg ttcgaccggc gaggcctttg tacaaagcct ttccgagcgt
    16081 gaacaggtac tggaaatcgt cgccgaagag gcgaaaggta agattaaact catcgcccac
    16141 gtcggttgcg tcagcaccgc cgaaagccaa caacttgcgg catcggctaa acgttatggc
    16201 ttcgatgccg tctccgccgt cacgccgttc tactatcctt tcagctttga agaacactgc
    16261 gatcactatc gggcaattat tgattcggcg gatggtttgc cgatggtggt gtacaacatt
    16321 ccagccctga gtggggtaaa actgaccctg gatcagatca acacacttgt tacattgcct
    16381 ggcgtaggtg cgctgaaaca gacctctggc gatctctatc agatggagca gatccgtcgt
    16441 gaacatcctg atcttgtgct ctataacggt tacgacgaaa tcttcgcctc tggtctgctg
    16501 gcgggcgctg atggtggtat cggtagtacc tacaacatca tgggctggcg ctatcagggg
    16561 atcgttaagg cgctgaaaga aggcgatatc cagaccgcgc agaaactgca aactgaatgc
    16621 aataaagtca ttgatttact gatcaaaacg ggcgtattcc gcggcctgaa aactgtcctc
    16681 cattatatgg atgtcgtttc tgtgccgctg tgccgcaaac cgtttggacc ggtagatgaa
    16741 aaatatctgc cagaactgaa ggcgctggcc cagcagttga tgcaagagcg cgggtgagtt
    16801 gtttcccctc gctcgcccct accgggtgag gggaaataaa cgcatctgta ccctacaatt
    16861 tttataccaa agcgtgtggg catcgcccac cgcgggagac tcacaatgag tactacaacc
    16921 cagaatatcc cgtggtatcg ccatctcaac cgtgcacaat ggcgcgcatt ttccgctgcc
    16981 tggttgggat atctgcttga cggttttgat ttcgttttaa tcgccctggt actcaccgaa
    17041 gtacagggtg aattcgggct gacgacggtg caggcggcaa gtctgatctc cgcagccttt
    17101 atctctcgct ggttcggcgg cctgatgctc ggcgctatgg gtgaccgcta cgggcgtcgt
    17161 ctggcaatgg tcaccagcat cgttctcttc tcggccggga cgctggcctg cggctttgcg
    17221 ccaggctaca tcaccatgtt tatcgcgcgt ctggtcatcg gcatggggat ggcgggtgaa
    17281 tacggttcca gcgccaccta tgtcattgaa agctggccaa aacatctgcg taacaaagcc
    17341 agtggttttc tgatttcagg cttctctgtg ggggccgtcg ttgccgctca ggtctatagc
    17401 ctggtggttc cggtctgggg ctggcgtgcg ctgttcttta tcggcatttt gcctatcatc
    17461 tttgctctct ggctgcgtaa aaacatcccg gaagcggaag actggaaaga gaagcatgca
    17521 ggtaaagcac cagtacgcac gatggtagat attctctacc gtggtgaaca tcgcattgcc
    17581 aatatcgtaa tgacactggc ggcggctact gcgctgtggt tttgcttcgc cggtaacctg
    17641 caaaatgccg cgatcgtcgc tgttcttggg ctgttatgcg ccgcaatctt tatcagcttt
    17701 atggtgcaaa gtacgggtaa acgctggcca acgggcgtaa tgctgatggt ggtcgtgttg
    17761 tttgctttcc tctactcatg gccgattcag gcgctgctgc caacgtatct gaaaaccgat
    17821 ctggcttata acccgcatac tgtcgccaat gtgctgttct ttagcggctt tggggctgcg
    17881 gtggggtgct gtgtcagcgg cttcctcggt gactggctgg gaacccgcaa agcctacgtt
    17941 tgtagcctgt tggcctcgca gctgttgatt attccggtat ttgcgattgg cggcgcaaac
    18001 gtctgggtgc tcggtctgtt actgttcttc cagcaaatgc ttggacaagg gatcgccggg
    18061 atcttaccga aactgattgg cggttatttc gataccgacc agcgtgcagc gggcctgggc
    18121 tttacctaca acgttggcgc attgggcggc gcactggccc caatcatcgg cgcgttgatc
    18181 gctcaacgtc tggatctggg tactgcgctg gcatcgctat cgttcagtct gacatttgtg
    18241 gtgatcctgc tgattggtct ggatatgcct tcccgcgttc agcgttggct gcgcccggaa
    18301 gcattgcgta ctcatgacgc tatcgacggc aaaccattta gcggtgccgt gccatttggc
    18361 agcgccaaaa acgatttagt caaaaccaaa agttaatcct gttgcccggt ctctgtaccg
    18421 ggcctttcgc taagggaaga tgtatgtcgt tacttgcaca actggatcaa aaaatcgctg
    18481 ctaacggtgg cctgattgtc tcctgccagc cggttccgga cagcccgctc gataaacccg
    18541 aaatcgtcgc tgccatggca ttagcggcag aacaggcggg cgcggttgcc attcgcattg
    18601 aaggtgtggc aaatctgcaa gccacgcgtg cggtggtgag cgtgccgatt attggaattg
    18661 tgaaacgcga tctggaggat tctccggtac gcatcacggc ctatattgaa gatgttgatg
    18721 cgctggcgca ggcgggcgcg gacattatcg ccattgacgg caccgaccgc ccgcgtccgg
    18781 tgcctgttga aacgctgctg gcacgtattc accatcacgg tttactggcg atgaccgact
    18841 gctcaacgcc ggaagacggc ctggcatgcc aaaagctggg agccgaaatt attggcacta
    18901 cgctttctgg ctataccacg cctgaaacgc cagaagagcc ggatctggcg ctggtgaaaa
    18961 cgttgagcga cgccggatgt cgggtgattg ccgaagggcg ttacaacacg cctgctcagg
    19021 cggcagatgc gatgcgccac ggcgcgtggg cggtgacggt cggttctgcc attacgcgtc
    19081 ttgaacacat ttgtcagtgg tacaacacag cgatgaaaaa ggcggtgcta tgaccacgtt
    19141 ggcgattgat atcggcggta ctaaacttgc cgccgcgctg attggcgctg acgggcagat
    19201 ccgcgatcgc cgagaacttc cgacaccagc cagccagact ccgcaggcgt tgcgtgatgc
    19261 cttagccgcg ttagtcgccc cgttgcaagc tcatgcgcag caggttgcca tcgcttcaac
    19321 cggaattatt cgcgacggca gcttgctggc gctgaatccg cataatcttg gtggattgct
    19381 acactttccg ttagtcaaaa cgctggaaca actttccaat ttgccgacca ttgccattaa
    19441 cgacgcgcag gccgcagcat gggcagagta tcaggcgctg gaaggcgata taaccgatat
    19501 ggtgtttatc accgtttcca ctggcgtcgg cggcggtgta gtgagcggcg gtaaactgct
    19561 taccggccct ggcggtctgg cggggcacat cgggcatacg cttgccgatc cacacggccc
    19621 agtctgcggc tgtggacgca caggttgcgt ggaagcgatt gcttctggtc gcggtattgc
    19681 agcggcagcg caaggtgaac tcatgggcgc ggatgcgaga actattttca cacgcgccgg
    19741 gcagggcgac gagcaggcgc agcaactgat tcaccgctcc gcacatgtgc tggcaaggct
    19801 gatcgctgat attaaagcca caactgattg ccagtgcgtg gtggtcggtg gcagcgttgg
    19861 tctggcagaa gggtatctgg cgttggtgga aacgtatctg gcgcaggagc cagcggcatt
    19921 tcatgttgat ttactggcgg cgcactaccg ccacgatgca ggtttacttg gggctgcgct
    19981 gttggcccag ggagaaaaat tatgatgatg ggtgaagtac agtcattacc gtctgctggg
    20041 ttacatcctg cgttacagga cgcgttaacg ctggcattag ctgccagacc gcaagaaaaa
    20101 gcgcctggtc gttacgaatt acagggcgac aatatcttta tgaatgtcat gacgtttaac
    20161 actcaatcgc ccgtcgagaa aaaagcggaa ttgcacgagc aatacattga tatccagctg
    20221 ttattaaacg gtgaggaacg gattctgttt ggcatggcag gcactgcgcg ccagtgtgaa
    20281 gagttccacc atgaggatga ttatcagctt tgcagcacca ttgataacga gcaagccatc
    20341 atcttaaaac cgggaatgtt cgccgtgttt atgccaagtg aaccgcataa accaggatgc
    20401 gttgtcggcg agccgggtga gattaaaaag gtggtggtga aggttaaggc tgatttaatg
    20461 gcttaaattt attagatcag gtgtgacctg acccatcttt ggcacagagc caaacctgaa
    20521 ctgacggacc gctctgtgcc attacctgac gttgtattct tttatgttaa ca
//
LOCUS       DADMJE010000064        20459 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.065, whole genome shotgun sequence.
ACCESSION   DADMJE010000064 DADMJE010000000
VERSION     DADMJE010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20459
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.065"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..876
                     /locus_tag="JN001_002101"
     CDS             <1..876
                     /locus_tag="JN001_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9053332.1"
                     /translation="DQTSWQLSHTFYNDSFSHKELGVTVGGLNTDTINSAVNGRWDGQ
                     YGNVYATVSDSYDRKNHDHLSAFTGTYSSTLAVSRYGVNLGASGTDDLLGAVLVDVKG
                     FSEQDEESQDLQLEARVAGSRTLQLGQSDSVLFPYPGFQSGFVEVNDSSQGNQQGTTN
                     IINGAGNRELMLLPGKLRYREVSASFNYNYIGRLLLPAAVKKFPIVGLNSAMLLVAED
                     GGFTLEINGSEKELYLLSGQQFLKCPLSVEKKRASIRYSGDVTCSVVTYSQLPELKQP
                     KLRGNVQTAQREVAP"
     gene            873..1238
                     /locus_tag="JN001_002102"
     CDS             873..1238
                     /locus_tag="JN001_002102"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein"
                     /protein_id="HAY9053333.1"
                     /translation="MRNRLIAAILGLFGTLTGVQAAPDVTSEITYDLASGRADYYFWK
                     DEASAGNNGYMWYECSYPDLQQTCTANGNISTVQIYLTEQRSGMRWPVKLKGFKTAIV
                     SSDEAPLGCKGGQRASDES"
     gene            1330..1962
                     /locus_tag="JN001_002103"
     CDS             1330..1962
                     /locus_tag="JN001_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pilus assembly protein CblD"
                     /protein_id="HAY9053334.1"
                     /translation="MKNLPIGGVWKGKVKLHSNSPAQDYFANITLNTLDPNHIDVFFP
                     EFAHATPRVQLDLHPTGSVNGSNYAQDLTMLDMCLYDGFNGNAISYEIMLKDEGRPAA
                     GRRDGDFSIYRQGGTSTDEGERIDYRVKMYNPETGGQIDVRNNENMVWNSINLKSVRP
                     VVLPGIRYAVMCVPTPLALAVDKFSVMDKQAGYYMGKLSVIFTPSLPTIN"
     gene            complement(2050..3348)
                     /locus_tag="JN001_002104"
     CDS             complement(2050..3348)
                     /locus_tag="JN001_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708898.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053335.1"
                     /translation="MRKIKGLRWYMIALVTLGTVLGYLTRNTVAAAAPTLMEELNIST
                     QQYSYIIAAYSAAYTVMQPVAGYVLDVLGTKIGYAMFAVLWAVFCGATALAGSRGGLA
                     IARGAVGAAEAAMIPAGLKASSEWFPAKERSIAVGYFNVGSSIGAMIAPPLVVWAIVM
                     HSWQMAFIISGALSFIWAMAWLIFYKHPRDQKHLTDEERDYIINGQEAQHQVSTAKKM
                     SVGQILRNRQFWGIALPRFLAEPAWGTFNAWIPLFMFKVYGFNLKEIAMFAWMPMLFA
                     DLGCILGGYLPPLFQRWFGVNLIVSRKMVVTLGAVLMIGPGMIGLFTNPYVAIMLLCI
                     GGFAHQALSGALITLSSDVFGRNEVATANGLTGMSAWLASTLFSLVVGALADTIGFSP
                     LFAVLAVFDLLGALVIWTVLQNKPAIEVAQESHNDPAPQH"
     gene            3831..5243
                     /gene="uxaC"
                     /locus_tag="JN001_002105"
     CDS             3831..5243
                     /gene="uxaC"
                     /locus_tag="JN001_002105"
                     /EC_number="5.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019077755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucuronate isomerase"
                     /protein_id="HAY9053336.1"
                     /translation="MTPFMTEDFLLDTEFARRLYHDYAKDQPIFDYHCHLPPQQIAED
                     YRFKNLYDIWLKGDHYKWRAMRTNGVAERLCTGDASDREKFDAWAATVPHTIGNPLYH
                     WTHLELRRPFGITGKLLSPSTADEIWNECNELLAQDNFSARGIMQQMNVKMVGTTDDP
                     IDSLEHHAEIAKDGSFTIKVLPSWRPDKAFNIEQATFNDYMAKLGEVSDTDIRRFADL
                     QTALTKRLDHFAAHGCKVSDHALDVVMFAEANEAELDSILARRLAGETLSEHEVAQFK
                     TAVLVFLGAEYARRGWVQQYHIGALRNNNLRQFKLLGPDVGFDSINDRPMAEELSKLL
                     SKQNEENLLPKTILYCLNPRDNEVLGTMIGNFQGEGMPGKMQFGSGWWFNDQKDGMER
                     QMTQLAQLGLLSRFVGMLTDSRSFLSYTRHEYFRRILCQMIGRWVEAGEAPADINLLG
                     EMVKNICFNNARDYFAIELN"
     gene            5258..6745
                     /locus_tag="JN001_002106"
                     /pseudo
     CDS             5258..6745
                     /locus_tag="JN001_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199350.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="altronate dehydratase"
     gene            6828..7379
                     /locus_tag="JN001_002107"
     CDS             6828..7379
                     /locus_tag="JN001_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgjV family protein"
                     /protein_id="HAY9053337.1"
                     /translation="MTAYWLAQGVGFIAFLIGITTFFNRDDRRFKKQLSVYSAVIGVH
                     FFLLGTYPAGASAILNAIRTLITLRTRSLWVMAIFIVLTGGIGLAKFHHPVELLPVIG
                     TIVSTRALFRCKGLTMRCVMWFSTCCWVIHNFWAGSIGGTMIEGSFLLMNGLNIIRFW
                     RMQKRGIDPFKVEKTPPAVDERG"
     gene            complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JN001_002108"
     CDS             complement(7384..8628)
                     /gene="sstT"
                     /locus_tag="JN001_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine transporter SstT"
                     /protein_id="HAY9053338.1"
                     /translation="MTTQRSPGLFRRLAHGSLVKQILVGLVLGILLAWISKPAAEAVG
                     LLGTLFVGALKAVAPILVLMLVMASIANHQHGQKTNIRPILFLYLLGTFSAALAAVVF
                     SFAFPSTLHLSSSAGDISPPSGIVEVMRGLVMSMVSNPIDALLKGNYIGILVWAIGLG
                     FALRHGNETTKNLVNDLSNAVTFMVKLVIRFAPIGIFGLVSSTLATTGFSTLWGYAQL
                     LVVLVGCMLLVALVVNPLLVWWKIRRNPFPLVLLCLRESGVYAFFTRSSAANIPVNMA
                     LCEKLNLDRDTYSVSIPLGATINMAGAAITITVLTLAAVNTLGIPVDLPTALLLSVVA
                     SLCACGASGVAGGSLLLIPLACNMFGISNDIAMQVVAVGFIIGVLQDSCETALNSSTD
                     VLFTAAACQAEDDRLANSALRN"
     gene            complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JN001_002109"
     CDS             complement(9244..10209)
                     /gene="alx"
                     /locus_tag="JN001_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001098790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family membrane protein Alx"
                     /protein_id="HAY9053339.1"
                     /translation="MNTVGTPLLWGGFAVVVAIMLAIDLLLQGRRGAHAMTMKQAAAW
                     SLVWVTLSLLFNAAFWWYLVQTEGRAVADPQALAFLTGYLIEKSLAVDNVFVWLMLFS
                     YFSVPAALQRRVLVYGVLGAIVLRTIMIFTGSWLISQFDWILYIFGAFLLFTGVKMAL
                     AHEDESGIGDKPLVRWLRGHLRMTDTIDNEHFFVRKNGLLYATPLMLVLILVELSDVI
                     FAVDSIPAIFAVTTDPFIVLTSNLFAILGLRAMYFLLAGVAERFSMLKYGLAVILVFI
                     GIKMLIVDFYHIPIAVSLGVVFGILVMTFIINARVNYRHDKQRGE"
     gene            complement(10493..11497)
                     /locus_tag="JN001_002110"
     CDS             complement(10493..11497)
                     /locus_tag="JN001_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HAY9053340.1"
                     /translation="MEYPRVMIRFAVIGTNWITRQFVEAAHESGKYKLTAVYSRSLEQ
                     AQHFANDFSVEHLFTSLEAMAESDAIDAVYIASPNALHFSQTQLFLSHKIHVICEKPL
                     ASNLAEVDAAIACARENQVVLFEAFKTASLPNFHLLRQALPKVGKLRKVFFNYCQYSS
                     RYQRYLDGENPNTFNPAFSNGSIMDIGFYCLASAVALFGEPKSVQATASLLASGVDAH
                     GVVVMDYGDFSVTLLHSKVSDSVLESEIQGEAGSLVIEKLSECQKVCFVPRGSQMQDL
                     TQPQHINTMLYEAELFATLVDEHLVDHPGLAVSRITAKLLTEIRRQTGVIFPADSVKL
                     "
     gene            complement(11558..12241)
                     /locus_tag="JN001_002111"
     CDS             complement(11558..12241)
                     /locus_tag="JN001_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001183047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vancomycin high temperature exclusion protein"
                     /protein_id="HAY9053341.1"
                     /translation="MQPRLLLRICFSRRTLKIACLLLLVAGATIFIADRVMVNASKQL
                     TWSDVNAVPARNVGLLLGARPGNRYFTRRIDTAAALYHAGKVKWLLVSGDNGRKNYDE
                     ASGMQKALIAKGVPAKVIFCDYAGFSTLDSVVRAKKVFGENHITIISQEFHNQRAIWL
                     AKQYSIDAIGFNAPDLNMKHGFYTQLREKLARVSAVIDAKILHSQPKYLGPSVMIGPF
                     SEHGCPAKE"
     gene            complement(12318..12821)
                     /locus_tag="JN001_002112"
     CDS             complement(12318..12821)
                     /locus_tag="JN001_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311994.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HAY9053342.1"
                     /translation="MSNLTYLQGYPEQLLSQVRTLINEQRLGDVLAKRYPGTHDYATD
                     KALWQYTQDLKNQFLRNAPPINKVMYDNKIHVLKNALGLHTAVSRVQGGKLKAKAEIR
                     VATVFRNAPEPFLRMIVVHELAHLKEKEHNKAFYQLCCHMEPQYHQLEFDTRLWLTQL
                     SLGQDKI"
     gene            12906..14042
                     /gene="rlmG"
                     /locus_tag="JN001_002113"
     CDS             12906..14042
                     /gene="rlmG"
                     /locus_tag="JN001_002113"
                     /EC_number="2.1.1.174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(1835)-N(2))-methyltransferase
                     RlmG"
                     /protein_id="HAY9053343.1"
                     /translation="MSHLDNGFRSLTLQRFPATDDVNPLQAWEAADEYLLQQLDDTEI
                     RGPVLILNDAFGALSCALAEHKPYSIGDSYISELATRENLRLNGIDESSVKFLDSTAD
                     YPQQPGVVLIKVPKTLALLEQQLRALRKVVTSDTRIIAGAKARDIHTSTQELFEKVLG
                     PTTTTLAWKKARLINCTFNEPPLADAPQTVSWKLEGTDWTIHNHANVFSRTGLDIGAR
                     FFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNM
                     PEALDRSEFMINNALSGVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING
                     ELYIVANRHLDYFHKLKKIFGNCTTIATNNKFVVLKAVKLGRRR"
     gene            14327..14641
                     /locus_tag="JN001_002114"
     CDS             14327..14641
                     /locus_tag="JN001_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HigB family
                     toxin"
                     /protein_id="HAY9053344.1"
                     /translation="MHLITQKALKDAAEKYPQHKTELVALGNMIAKGYFKKPESLKAV
                     FPSLDNFKYLDKHYVFNVGGNELRVVAMVFFESQKCYIREVMTHKEYDFFTAVHRTKG
                     KK"
     gene            14638..15054
                     /gene="higA"
                     /locus_tag="JN001_002115"
     CDS             14638..15054
                     /gene="higA"
                     /locus_tag="JN001_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin HigA"
                     /protein_id="HAY9053345.1"
                     /translation="MIAIADILQAGEKLTAVVPFLAGIQNEEQYTQALELVDHLLLND
                     PENPLLDLVCAKITAWEESAPEFAEFNAMAQAMPGGIAVIRTLMDQYGLTLADLPEIG
                     SKSMVSRVLSGKRKLTLEHAKKLATRFGISPALFID"
     gene            complement(15099..17117)
                     /locus_tag="JN001_002116"
     CDS             complement(15099..17117)
                     /locus_tag="JN001_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent 2,4-dienoyl-CoA reductase"
                     /protein_id="HAY9053346.1"
                     /translation="MSYPSLFAPLDLGFTTLKNRVLMGSMHTGLEEYPDGAERLAAFY
                     AERARHGVALIVSGGIAPDLTGVGMEGGAMLNDASQIPHHRTITEAVHQEGGKIALQI
                     LHTGRYSYQPHLVAPSALQAPINRFVPHELTHEEILQLIDDFAHCAQLAREAGYDGVE
                     VMGSEGYLINEFLTLHTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSM
                     LDLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKL
                     KGHVSLPLVTTNRINDPQVADDILSRGDADMVSMARPFLADAELLSKAQSGRADEINT
                     CIGCNQACLDQIFVGKVTSCLVNPRACHETKMPILPAVQKKNLAVVGAGPAGLAFAIN
                     AAARGHQVTLFDAHSESGGQFNIAKQIPGKEEFYETLRYYHRMIEVTGVTLKLNHTVT
                     ADQLQAFDETILASGIVPRVPPIDGIDHPKVLSYLDVLRDKAPVGNKVAIIGCGGIGF
                     DTAMYLSQPGESTSQNIARFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKAS
                     KPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVIC
                     AGQEPNRALAQPLIDSGKTVHLIGGCDVAMELNARRAIAQGTRLALEI"
     gene            complement(17343..19694)
                     /gene="ygjK"
                     /locus_tag="JN001_002117"
                     /pseudo
     CDS             complement(17343..19694)
                     /gene="ygjK"
                     /locus_tag="JN001_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417551.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
     gene            complement(19711..>20459)
                     /gene="ygjJ"
                     /locus_tag="JN001_002118"
     CDS             complement(19711..>20459)
                     /gene="ygjJ"
                     /locus_tag="JN001_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="protein YgjJ"
                     /protein_id="HAY9053347.1"
                     /translation="PDHSWGGFEGGINRFYGGYRTNDGTEIMLSLRQDSSLDDLQWWG
                     DFTPDLGYVIPNTRDIMTALKVQNLSGNFRYSVTATPAGHHDESKAWLHFGKYDRYDD
                     KYTYPAMMNGYIQYDLAEGITWMNGLEITDGTGQLYLTGLLTPNFAARAWHHTGRADG
                     LDVPGSESGMMVSAMYEALKGVYLSTAYTYAKHRPDHADDETTSFMQFGIWYEYGGGR
                     FATAFDSRFYMKNASHDPSDQIFLMQYFYW"
BASE COUNT         5003 a         5354 c         5362 g         4740 t
ORIGIN      
        1 gatcaaacgt catggcagtt atcgcatacc ttttataatg attcattcag ccataaagaa
       61 cttggcgtaa ccgtcggagg cctgaacacc gataccataa acagcgcggt taacgggcgt
      121 tgggatgggc aatacggaaa tgtctacgct accgtatctg atagttatga ccgtaagaat
      181 catgatcatc tttcggcctt tacgggcact tatagctcta cgctggctgt cagtcgctat
      241 ggcgttaatt tgggagccag tggtacagac gatttgctgg gtgcggtatt ggtggatgtg
      301 aaaggcttct ctgaacagga tgaagagagt caggatctgc aactcgaagc gcgggtggca
      361 ggcagccgaa ctttgcagct tggtcaaagc gacagtgtgt tgttccctta tcctggattt
      421 cagtctggtt ttgttgaggt taacgacagt agccagggca atcagcaggg gacaacaaac
      481 atcattaacg gtgcagggaa tcgtgaatta atgttgttgc ctggcaagct gcgctatcgc
      541 gaagtgtctg ccagctttaa ctacaactat atcggtcgtt tattactgcc ggcagcggtg
      601 aaaaaattcc cgattgtggg gctgaacagc gccatgttac tggtagctga agatggcgga
      661 tttacacttg aaattaacgg cagcgaaaaa gagctctatc tgctttccgg gcagcaattc
      721 cttaagtgtc cactgagtgt tgaaaagaaa cgcgccagca ttcgttacag cggagatgtt
      781 acttgtagtg tggtgactta ttcacaatta ccggagttga aacagcctaa attacgtgga
      841 aacgttcaga cggcgcaaag ggaggttgca ccatgagaaa tcgattgatt gcggcgatat
      901 tgggcttgtt tggcacgctc actggcgttc aggcagctcc tgacgtgacc agtgaaatta
      961 cgtatgattt ggcatctggt agagcggatt attacttctg gaaggatgaa gcgtcggcag
     1021 gaaataatgg atatatgtgg tatgaatgtt cgtatcctga cctccaacaa acctgtacag
     1081 ctaatggaaa tatatcgaca gtacaaatct atttaactga acaacgcagt gggatgcgtt
     1141 ggccggtaaa actcaaagga tttaaaacag ccattgtaag tagcgatgaa gcgccgctag
     1201 gatgcaaggg ggggcaaagg gcttcagacg aatcttaagg attctaatag atcttcatgt
     1261 acagaagatg gtcaacatta ttatatatac gatacaaagt ttcttacgct ctaccttgag
     1321 cagacagaga tgaagaattt gccgattggt ggcgtctgga aggggaaagt taaattacat
     1381 tcgaacagcc cggcccagga ctatttcgca aatattaccc tgaatacgct cgaccccaac
     1441 catattgacg tgttcttccc ggagttcgcc cacgccacgc cgagggtgca gttagacttg
     1501 catccaacag gaagcgttaa cggcagcaac tacgcgcaag atctgaccat gttggacatg
     1561 tgcctgtacg atggttttaa cggtaatgcc atcagttatg aaatcatgct caaagatgaa
     1621 gggcgaccag ctgcagggcg cagagacggt gacttctcta tctatcgtca gggaggaacc
     1681 tctaccgacg agggagaacg cattgattac cgggtcaaaa tgtacaaccc ggaaaccggt
     1741 gggcaaattg atgtgcgcaa taatgaaaat atggtctgga acagcattaa cctgaaaagt
     1801 gtgcgtccgg tggtactgcc cggtattcgc tatgccgtga tgtgtgtgcc gacacccttg
     1861 gctctggcag tcgataaatt cagcgtgatg gataaacagg ccgggtacta catgggcaaa
     1921 ttgtcagtaa tctttacgcc ttccttgcca accatcaatt aaccctgcaa agcggacaaa
     1981 cgcttttttc tatataaacg acgaagccgc ctgataaggc ggcttcgtcg ttataactta
     2041 cgttaaacgt taatgttgcg gtgcgggatc gttatgtgat tcctgcgcta cctcaatcgc
     2101 cggtttgttc tgcaacacgg tccagataac cagcgcacct aacaggtcga acactgccag
     2161 tactgcgaac agcgggctga agccgatggt gtcagccagt gcaccgacaa ccagcgaaaa
     2221 cagcgtactt gccagccatg cggacatccc ggttaaaccg ttcgccgtcg ccacttcgtt
     2281 acgaccgaac acgtcagaag agagcgtaat cagcgcgcca gacagtgcct ggtgagcaaa
     2341 accaccgata cacagcagca taattgcgac atacgggttg gtgaacaggc cgatcatacc
     2401 cgggccaatc atcagcactg cacccagcgt tacgaccatc ttacgggaaa cgatcaggtt
     2461 cacaccaaac caacgctgga acagcggcgg caggtaacca ccgaggatac aaccgaggtc
     2521 agcaaacagc atcggcatcc aggcgaacat cgcgatctct ttcaggttaa agccgtaaac
     2581 tttaaacatg aacagcggga tccacgcgtt aaaagtaccc caggctggtt ctgccaggaa
     2641 acgcggcagc gcgatacccc agaactgacg gttacgcagg atctgaccaa cggacatttt
     2701 cttcgccgtg ctcacctggt gctgggcttc ctgaccatta ataatatagt cgcgttcttc
     2761 atcggtcaga tgcttctggt cgcgcggatg tttatagaaa atcagccatg ccatcgccca
     2821 gataaagctc aatgcaccgg agatgataaa tgccatctgc cagctgtgca ttacgattgc
     2881 ccataccacc agcggcggcg caatcatcgc accaatcgaa gaacctacgt taaagtaacc
     2941 taccgcgatg gaacgctctt tcgccgggaa ccattcggag ctggctttca gacccgccgg
     3001 gatcatcgct gcttccgcgg caccgactgc accacgagca atcgccaggc cacccctgct
     3061 accagccagc gcggttgcac cacagaatac ggcccacagt acagcaaaca ttgcataacc
     3121 gattttcgta cccagcacat ccagtacata gcccgctacc ggttgcatga ccgtataagc
     3181 agcagaatag gctgcgatga tataggaata ctgttgggtg gagatgttta actcttccat
     3241 cagagttggc gcagctgccg ccacagtgtt acgcgtcagg taaccaagca cggtgccaag
     3301 cgtcaccagt gcgatcatat accaacgtaa ccctttaatt ttacgcatgt aaaacctcat
     3361 cgttttgtta tatccgcagg aagcgcggcc atcatcccgc cagaggctga agatgttagt
     3421 tacgaccggg taaccgaaaa aaaaccggca cgccccgaac gttgccatga aagtttcgtg
     3481 ctaattcggc ttccgtaccg gttaacccga ttcatctaac aaatgaatga atcggcaatt
     3541 tgcattccgt cgacttatga tttgcgacgg cagaaagatg acttgtcata caactttaaa
     3601 aggtgagagc catcataaat gtgcgaatat ttgtagggac attacctgac gacagcgagg
     3661 ccagtactgg cgcggcctgc agcgagattt accactttga gagtaatttt tttaactacg
     3721 tttattgatc taactcacga aaatatcttc ggactctgga aattggtgtg ataactttgt
     3781 cagcatcgca ccataagcaa gctagctcac tcgttgagag gaagacgaaa atgactccgt
     3841 ttatgactga agatttcctg ttagataccg aatttgcccg ccgtctgtat cacgactacg
     3901 caaaagacca gccgattttc gattaccatt gccatttgcc gccgcagcag attgcggaag
     3961 actatcgttt taaaaacctg tatgacatct ggctgaaagg cgatcactac aaatggcgcg
     4021 ctatgcgtac caacggtgtg gccgagcgtc tgtgtaccgg tgatgcgtct gaccgtgaaa
     4081 aatttgacgc ctgggcggcg actgttccgc acactatcgg caacccgtta taccactgga
     4141 cgcacctcga actgcgtcgt ccgtttggta tcactggcaa attgctttct ccgtcaactg
     4201 ccgatgaaat ctggaacgaa tgtaacgaac tgctggcgca ggataacttc tccgcgcgcg
     4261 gcatcatgca gcagatgaac gtgaaaatgg tcggcaccac cgatgacccg atcgattctc
     4321 tggagcatca cgcagagatc gccaaagacg gctctttcac catcaaagtg ctgccgagct
     4381 ggcgtccgga caaagccttc aatatcgaac aggcgacctt taacgactac atggcgaagc
     4441 tgggcgaagt ttccgatacc gacattcgcc gctttgctga cctgcaaact gccttgacca
     4501 aacgtctgga tcacttcgcc gctcacggct gtaaagtgtc tgaccatgcg ctggacgtgg
     4561 tgatgtttgc tgaagcgaac gaagcggaac tggacagcat tctggcgcgc cgtctggctg
     4621 gcgaaaccct gagcgagcac gaagtggcac agttcaaaac tgcggtactg gtgttccttg
     4681 gtgccgaata tgcacgtcgc ggctgggtac agcagtacca cattggcgcg ctgcgtaata
     4741 acaacctgcg tcagttcaaa ctgctggggc cggatgtagg ctttgactcc atcaacgacc
     4801 gtccgatggc agaagagttg tctaagctgc tgagcaagca gaacgaagaa aacctgctgc
     4861 cgaaaaccat tctgtactgc ctgaacccgc gcgataacga agtgttgggc accatgatcg
     4921 gtaacttcca gggcgaaggt atgccgggca aaatgcagtt cggttccggc tggtggttta
     4981 acgatcagaa agacggtatg gaacgtcaga tgacccaact ggcgcagctc ggtttgctga
     5041 gccgctttgt cggtatgctg actgacagcc gtagcttcct gtcatacacc cgtcacgaat
     5101 acttccgccg cattctgtgc cagatgatcg gtcgctgggt ggaagcgggc gaagcaccgg
     5161 cggacatcaa cctgctgggc gagatggtga aaaatatttg ctttaacaat gcgcgtgact
     5221 acttcgccat tgaactgaac taaggtctgg ggttgatatg caatacatca agatccatgc
     5281 gctggataac gtcgcggtcg ctttagcgga tttggctgaa ggcacagaag tcagtgtcga
     5341 taaccagact gttacgctgc gccaggatgt tgctcgtgga cataaatttg cgttaacgga
     5401 tatcgcaaaa ggggccaatg tcatcaaata tggcctgccg attggttatg cattggcgga
     5461 tattgcggcg ggggaacacg tccacgccca caatacgcgc acgaatctga gcgatctgga
     5521 tcagtatcgc tatcaacctg attttcagga tctgcctgcg caagcggcag atcgtgaagt
     5581 gcagatctat cgtcgcgcta acggcgatgt cggggtgcgt aacgagctgt ggatcctgcc
     5641 aaccgtgggc tgtgtcaacg gcatcgcgcg gcagatccag aaccgttttc tgaaagagac
     5701 caacaacgct gaaggtaccg acggcgtgtt cctcttcagc cacacctacg gctgctcaca
     5761 gctgggcgac gatcacatta atacccgcac catgctgcaa aacatggtgc gccacccgaa
     5821 cgcaggcgca gtgctggtga ttggtctggg ctgtgaaaac aactaggttg ccgcattccg
     5881 tgaaacgctg ggcgatatcg atcctgaacg cgttcatttc atgatctgcc aacagcagga
     5941 tgatgagatc gaagccggga tcgagcattt gcatcagctg tataacgtga tgcgcaacga
     6001 taaacgcgag ccaggcaaac tcagcgaact gaagtttggt ctggagtgcg gtggttctga
     6061 cggtctttct ggtattactg ctaacccgat gctggggcgt ttctctgact acgtgattgc
     6121 taacggcggt actaccgtac tgaccgaagt gccggagatg tttggcgcag agcagttgct
     6181 gatggaccat tgccgcgacg aagcaacgtt tgaaaaactg gtcaccatgg tcaacgactt
     6241 taaacagtac tttattgccc atgatcagcc gatctacgaa aacccatcac cggggaacaa
     6301 agcgggcggt atcaccacgc tggaagacaa atcacttggc tgtacccaga aagcgggttc
     6361 cagtgtcgtg gttgacgtgc tgcgttacgg cgagcgtctg aaaacgccag ggctgaactt
     6421 gttaagtgcg ccgggtaacg atgccgtagc gaccagcgcc ctggcgggtg cgggctgcca
     6481 tatggtgctg ttcagtactg gtcgcggcac gccatacggt ggatttgtgc cgacggtgaa
     6541 aatcgccacc aacagtgaac tggcggcgaa gaaaaaacac tggctcgact ttgacgcggg
     6601 tcagctgatc cacggtaaag cgatgccgca gttgctggaa gaatttatcg acatcatcgt
     6661 tgagtttgcc aacggtaaac aaacctgcaa cgagcgtaac gacttccgcg aactggcgat
     6721 cttcaaaagc ggcgtaacgc tataaagtcg aaatgagttg ttaataaaaa acggcgtttc
     6781 ataatgtgaa gcgccgtttg cttttccata cctgataagg atttatcatg accgcgtatt
     6841 ggctggccca gggcgtgggt ttcatcgcct ttctgattgg tatcacaaca tttttcaatc
     6901 gtgacgaccg tcgcttcaaa aagcagcttt cggtctatag cgccgttatt ggcgtacatt
     6961 tttttcttct gggcacctat cccgctggtg ccagtgccat ccttaatgcc attcgtacat
     7021 tgattacctt acgcacgcgc agcttatggg taatggcgat ttttattgtg ctgactggcg
     7081 gaattggcct cgcgaagttc catcatcctg tcgaactatt gccggttatc ggtacgattg
     7141 tcagtaccag ggcgctgttc cgctgtaaag ggctcaccat gcgctgcgtg atgtggtttt
     7201 caacgtgttg ctgggtgatt cacaacttct gggcggggtc gataggcggc acaatgattg
     7261 agggtagttt tctgcttatg aatggcttga atatcattcg tttctggcgg atgcagaaaa
     7321 ggggaattga tccgtttaaa gtagagaaaa cccctcccgc cgtagacgaa aggggttaaa
     7381 caattaatta cgcagggcgc tatttgccag acgatcgtct tccgcctggc aagctgccgc
     7441 agtgaacagc acgtcagttg aagagttcag cgcggtttcg caagagtcct gcaatacgcc
     7501 gatgataaag ccgacggcaa ccacctgcat ggcgatatcg ttcgaaatac cgaacatatt
     7561 acaggccagc gggatcagca gcagagaacc ccccgccacg ccggatgcgc cacaggcaca
     7621 cagagaagcc accacgctca acagcagcgc cgtgggcaga tcgaccggga tacccagcgt
     7681 attaaccgca gccagcgtca acacggtaat ggtgattgct gcgcccgcca tattgatggt
     7741 ggcacccagc ggaatagaaa cggaataggt atcgcgatcc agattcagct tttcacacag
     7801 tgccatattc accggaatgt tcgccgcaga gctgcgggtg aagaaggcat acacgccgct
     7861 ttcgcgcagg cacagcagca ccagcgggaa cgggttacga cgaattttcc accacaccag
     7921 caatgggtta accaccagcg ccaccagtaa catacagcca accagcacga ccagcagttg
     7981 cgcgtagccc cacagtgtgg agaaaccggt ggttgccagg gtagaagaaa ccagaccaaa
     8041 aataccaatc ggtgcgaagc gaatgaccag tttcaccata aaggtgacgg cattcgacag
     8101 atcgttgacc aggtttttgg tggtctcgtt accgtgacgc agtgcgaaac cgaggccaat
     8161 tgcccacacc aggatcccga tgtagttacc tttcagcagc gcgtcgatgg ggttggaaac
     8221 catgctcatt accagcccgc gcatcacttc tacaatgcct gacggtggcg aaatatcacc
     8281 cgcgctactg gataagtgca gggtagaagg gaaggcgaag ctgaaaacga ctgcggccag
     8341 agcagcagag aaggtaccca gcagatagag gaacaaaata gggcggatat tggttttctg
     8401 cccgtgctgg tggttagcaa tagatgccat caccagcatc aacaccagga tgggggcaac
     8461 ggctttcagt gcgccgacga acaaagtacc taacagacca acagcttccg ccgcgggttt
     8521 tgagatccat gccagaagaa tccccagaac aaggccgacc aggatttgtt ttaccaggct
     8581 gccatgagcc agacgccgga atagccccgg tgaacgttgc gtagtcattt ttcgatcctt
     8641 tcattgtgtt gtcgcacatc cctggtgcgt tctgtcgacg catctttcag gatgtaacaa
     8701 agtgtttgca aggtcgagta taaggaaagt tacagcttcg ggaagcgaaa aatgctggat
     8761 tttaaagaga ggtcatattt tgcaacttaa ttgttacatt tgtttgacat aaacagaggg
     8821 aaggactggc tactaaggct gattagataa catatgggca aaactatttg gaatatgaga
     8881 acggttgcgc tcctttaatg tgctatgcca tataaagtca ctggcgcagg gagcgcgcag
     8941 ggggcagcca atcgccgccg ccccctgcac ccccaggctc tggcgaacaa aatcgccgct
     9001 gcgcgattcc ctcagcttat cccttgcggc taccgggtcg ggcgcaaggg aacgtccctg
     9061 taagatgcgc cctcgccgcg catccatgcg cgtcgccccg gcctccaggg aacgcttcgg
     9121 cgattttgac gccaccaaca cccgtgcggt ctttttgtaa agagctacaa gccaattaca
     9181 taattaatag ctcacctttg tctggaatga gttatctcta ggaatggctt aatatacagc
     9241 gaatcattct ccccgctgct tatcatgccg ataattcacc ctggcgttga taataaacgt
     9301 catcaccaga atgccaaaca ccacgcccag cgagacggcg attggaatat ggtagaagtc
     9361 gacaatcagc atcttgatac cgataaacac caggatcacc gccaggccat atttgagcat
     9421 cgagaaacgc tctgctacgc ccgccagcag gaaatacatc gcacgcaggc cgaggatcgc
     9481 aaacaggttt gaggtcagca caatgaacgg gtcagtggtc acggcgaaga tagccggaat
     9541 gctatccacg gcgaaaatca cgtcgctcaa ttccaccaga atcagtacca gcatcagcgg
     9601 tgtggcgtac agcaatccat tcttacgcac aaagaaatgc tcgttgtcga tggtgtcggt
     9661 catgcgcaaa tgaccgcgta gccagcgcac cagcggcttg tcgccaatgc ctgattcatc
     9721 ttcatgggcg agcgccatct tcacgccggt aaacagcagg aaggcaccga agatatacag
     9781 gatccagtcg aactgcgaaa ttagccagct gccagtgaag atcatgatgg tacgcagaac
     9841 aatcgccccg agcacgccat acaccagcac gcggcgttgt aatgccgccg gaacagagaa
     9901 atagctgaac aacatcagcc agacaaagac gttatcgacc gccagcgatt tctcaatcag
     9961 ataacccgtg agaaaggcca gtgcctgtgg atcggcaacg gcgcgacctt cggtttgcac
    10021 cagataccac cagaaagcgg cgttaaacag taacgacagc gtcacccaaa ccagcgacca
    10081 ggccgcagcc tgtttcatgg tcatggcatg tgccccacga cgcccctgca acaacaggtc
    10141 gatagccagc ataatggcga caacaacagc gaatccgccc catagcaacg gcgtgccgac
    10201 agtattcata gaagttcctt acacataaaa aaaacggcca acgtcggaag acgtcagccg
    10261 ctgcttttta tgcatagacc tcgccttccg gcaaggtctc acttacaaca aaaaaggaat
    10321 acgtctgcgt attcctttcg ggttgcccgg tgaccggatg tggtttttca cacatcgtaa
    10381 tgacgatcga ccggcaatga agttactccc ctttgcaggt aacaaagtat gacagaccat
    10441 tcagccagtc aatggtctgt tacatacctt ttacactgtt ttactttggc aattatagtt
    10501 ttacgctatc tgccggaaaa atcaccccag tctggcggcg gatctcagtc agcagtttgg
    10561 cggtgatgcg actgaccgcc agccctggat gatccaccag atgctcatcc accagggtag
    10621 caaacagctc tgcttcgtag agcatggtat taatatgctg cggctgggtg agatcctgca
    10681 tctggctgcc acgcggcacg aagcacactt tctggcattc agacagtttt tcaatcacca
    10741 gcgatcccgc ttcgccctga atctcgcttt ccaggacaga atcactgacc tttgagtgca
    10801 gcaacgtaac gctgaaatca ccgtaatcca tcaccaccac gccgtgggca tctacgccgc
    10861 ttgccaacaa actggcggtt gcctgcacgc ttttcggttc accgaataat gccaccgccg
    10921 acgccaggca gtaaaagccg atatccataa ttgaaccgtt agagaatgcc ggattaaagg
    10981 tgttgggatt ctcaccatcc aggtaacgtt gataccgcga ggaatactgg caatagttga
    11041 aaaagacttt acgcaatttg ccgactttcg gcagcgcctg gcgcagcaaa tgaaagttcg
    11101 gcaggctggc ggttttaaat gcctcaaaca gcaccacctg attttcccgc gcacaggcaa
    11161 tggcggcatc cacttccgcc agattcgacg ccagtggttt ctcgcaaatc acatgaattt
    11221 tatggctaag gaaaagttgt gtctgggaaa agtgcagggc attcgggctg gcaatataca
    11281 ccgcgtcaat ggcatcgctt tccgccatcg cttccagcga ggtaaacaga tgctcgacag
    11341 aaaaatcatt ggcgaagtgc tgggcctgtt caaggctgcg ggaatatacg gcggttaact
    11401 tgtatttacc gctctcatgg gcggcctcga cgaactggcg agtgatccag ttcgtaccaa
    11461 tcacagcgaa acgtatcata acgcgtggat actccataaa gggattctgt cgtcaatgta
    11521 gcacgccttt ttcatcttcg acgtgcgcag atacgcatta ttcttttgcc ggacagccat
    11581 gctcactaaa cggcccaatc atgaccgatg gcccgagata tttcggctgg ctatggagga
    11641 ttttggcgtc aatcacggcg ctgacacgag cgagtttctc tcgcagttga gtataaaaac
    11701 cgtgcttcat attgaggtca ggcgcgttaa aaccgatagc gtcgatgctg tactgttttg
    11761 ccagccagat ggcgcgttgg ttatgaaatt cttgcgagat aatggtgata tggttttcac
    11821 caaaaacctt tttggcacgc actaccgaat ccagcgttga gaatccggca tagtcgcaga
    11881 agatcacttt cgccggtacg cctttagcga tcaaagcctt ctgcatacct gatgcttcat
    11941 cgtaattttt acgtccgtta tcgccactta ccagtagcca tttcactttt ccggcgtggt
    12001 acaacgctgc tgcggtatca atacgtcggg taaagtagcg attacccggc ctggccccca
    12061 gcaataagcc cacgttacgc gccggaactg cgttgacatc gctccaggtc agctgcttgc
    12121 tggcgttgac cattactcga tcggcgataa aaatggtcgc tcctgccaca agtaacagta
    12181 agcaggcaat ctttagagtc cggcgagaaa aacaaatacg gagaagaagg cggggctgca
    12241 tggtcgttat ccttaacgaa aggggggagg tcgattttag gcgctaaaga aagaaaagat
    12301 aacgcctgac atcattttca gattttgtcc tgcccaagcg acaactgcgt tagccacagc
    12361 cgggtgtcga actccagctg gtggtactgc ggctccatat ggcagcacaa ctggtaaaac
    12421 gctttgttat gctctttctc cttcaggtgc gccagttcgt gcaccacgat catacgtaaa
    12481 aacggttccg gcgcgttgcg aaacacagta gcgacgcgga tctctgcttt tgctttcagc
    12541 ttgccgccct gcacacgaga aacagcggta tgtaacccga gcgcgttttt tagcacatgg
    12601 atcttattgt catacatcac tttattgatc ggcggggcat tgcgcagaaa ctgatttttt
    12661 agatcctgag tatattgcca gagggcttta tcggtggcgt agtcgtgtgt tcccggatag
    12721 cgttttgcca gcacatcgcc cagacgctgt tcgttaatca gcgttcgcac ctgggaaagt
    12781 agctgctcgg gataaccctg aagataagta agattgctca taaccgccca cgaaaaagag
    12841 aaaaagggta tactcacgca cccttttcag gggcaacgtc gaaattttat cattcaggag
    12901 ggccgatgag ccacttagac aacggtttcc gttcactgac actacaacgt tttccggcga
    12961 cggatgacgt taacccgcta caggcgtggg aagcggcgga tgaatatttg ctgcaacagt
    13021 tggacgacac agaaatccgc ggcccggtgt tgatcctgaa tgatgccttt ggtgcgttaa
    13081 gctgcgcgct ggcggaacat aagccgtaca gcattggcga ctcatacatc agtgaactgg
    13141 cgacgcgcga gaatttacgc ctcaacggga ttgatgagtc gagcgtgaag tttctcgaca
    13201 gcaccgccga ctacccgcaa cagccgggtg tggtgctgat caaagtgccg aaaacactgg
    13261 cattgctgga acaacaactg cgtgcgctgc gcaaagtggt cacgtcggat acacgtatta
    13321 ttgccggtgc caaagcccgt gacattcaca cttccacgca ggaactgttc gaaaaagtgc
    13381 tcggcccgac caccaccacg ctggcatgga aaaaagcgcg cctgattaat tgcacgttca
    13441 atgaaccgcc gctggccgat gcgccgcaga ccgttagctg gaagctggaa ggtactgact
    13501 ggactatcca taaccatgcg aatgtcttct cccgcaccgg gcttgatatc ggcgcgcgct
    13561 tctttatgca acatctgcca gagaatctcg aaggggagat tgtcgatctc ggttgcggta
    13621 atggcgttat tggtctgacg ctgcttgata aaaatccgca ggcgaaagtg gtgtttgtcg
    13681 atgaatcgcc gatggcggtt gcttccagcc gtttgaacgt tgaaaccaac atgccagagg
    13741 cgttggatcg cagcgagttt atgatcaaca acgcgctctc cggcgtggag cctttccgct
    13801 ttaatgctgt gctctgcaac ccgccgtttc accaacaaca tgcgctgacc gataacgtcg
    13861 cctgggagat gttccaccat gcccgccgct gcctgaaaat caacggcgag ctgtatattg
    13921 ttgccaaccg tcacctggat tacttccata aactgaagaa gattttcggc aactgcacca
    13981 ccatcgccac gaataataaa tttgtggtgc tgaaagcagt gaagctgggg cgtcgtcggt
    14041 aagattggga gttacctgcc ggatgcggcg ttaacgcctt atccggccta cgttcagcac
    14101 gttactccca ggccggataa gacgcggcaa gcgtcgcatc cggcaatgtc tgcccagttc
    14161 tggaatcgcg cttccataaa acaaaaaatc cctctcacca tcctctacat tctcttgttt
    14221 agcgtttttc tacgtttatt cttccgtcac acagataaat tcatccgttg ccaatctgtc
    14281 aacggatgtt atcatattgc caatttgtca acggacgtga tgaagaatgc acctgataac
    14341 tcaaaaagca ttgaaagatg ctgcggaaaa atacccgcaa cataaaacgg agttggtggc
    14401 tctggggaac atgattgcta agggatattt caaaaaacct gagtcattaa aagcagtatt
    14461 cccatctctg gataacttca aatatctgga taagcattat gttttcaatg ttgggggcaa
    14521 tgaattacgt gttgtagcaa tggtcttttt tgaatcgcaa aagtgctaca tacgtgaagt
    14581 tatgacgcat aaagaatacg atttctttac cgctgttcat cgtactaagg ggaaaaaatg
    14641 attgcgattg ccgacatctt gcaagcagga gaaaagctaa ctgcggtggt accttttctg
    14701 gcgggtattc agaacgagga acaatacacc caggcgctgg aactggtaga tcatctgctg
    14761 ctcaacgatc ctgaaaaccc cttgctggat ctggtgtgtg ccaaaataac cgcgtgggaa
    14821 gaatcagcgc ccgaatttgc ggaatttaat gccatggctc aagccatgcc tggcggtata
    14881 gccgtgattc gtacccttat ggatcaatat ggtttaaccc ttgccgatct gccggaaatt
    14941 ggcagtaaat ctatggtgtc acgcgttttg agcgggaaga ggaaattaac gctggaacac
    15001 gctaaaaaat tggcaacgcg attcggcatt tctcccgcct tgtttattga ttaacgcgac
    15061 gtgccggatg cgttgcatcc ggcgcttcaa ataacgattt aaatctccag cgccagccgt
    15121 gttccctggg caattgcccg tcgtgcgttc agctccatag ccacatcgca gccgccaatt
    15181 aaatgcacag ttttcccgct atcaatcagc ggttgcgcca gcgcgcggtt tggctcttgc
    15241 cctgcgcaga tcaccacatt gtccacagct aatacctgcg tttcgccgtt gatcaccaca
    15301 tgcagcccgt catcgtcaat cttctgataa cttacgcctg ggatcatttt cacaccccgc
    15361 gagagcaggg tggtgcgatg gatccagccg gtggttttgc ctaacccctg tcccggtttg
    15421 ctggctttgc gctggagcat cacaatttgc cgtgggctac gcgggatctg cattccctgc
    15481 gggcttaagc caccagcctg ttgtaggctg ctgtcgatcc cccactcatt acagaacctg
    15541 gcgatattct ggctggtgga ttcgcccggc tgacttaaat acatcgccgt atcaaaacca
    15601 atcccgccac aaccgatgat ggcaaccttg ttgcctaccg gcgctttgtc gcgcagtaca
    15661 tcgagataac tcaatacctt cggatgatcg atcccgtcga taggcggaac gcgcggcacg
    15721 atcccactgg cgaggatcgt ttcatcgaac gcctgtaact gatccgccgt cacggtgtga
    15781 ttgagtttca gcgtcacgcc cgtcacttcg atcatccggt ggtaatagcg cagcgtttcg
    15841 taaaactcct ctttgccggg gatctgtttg gcgatattaa actgcccgcc gctctcgctg
    15901 tgggcatcaa acaatgttac ctgatgccca cgcgccgccg cgttaatggc aaacgccagc
    15961 ccagcaggtc ccgcaccgac caccgccaga ttttttttct gcacggcagg aaggattggc
    16021 attttggttt cgtggcaggc gcgaggattc accaggcacg aggtgacttt gccaacgaag
    16081 atctgatcga ggcaggcctg attgcagcca atgcaggtgt tgatctcatc ggctcgcccc
    16141 gattgcgctt ttgacagcag ttccgcatca gcaagaaacg gtcgtgccat cgataccata
    16201 tcggcatcgc cgcgcgagag aatatcgtcg gcaacctgcg gatcgttaat ccggttggtg
    16261 gttaccagcg gcagcgagac gtggcctttc agtttgcgcg tgacccagct aaatgcgccg
    16321 cgcggcacgg gcgtggcaat ggtcggaata cgtgcttcat gccagccaat gccggtgttg
    16381 ataatggtcg cgcccgccgc ttcaatggcc tgcgccagct ctaccgtttc ggcaaaagtc
    16441 ccgccgtctt cgaccaggtc gagcatcgac agtcggtaga taataatgaa gtcgttgccg
    16501 acgcgttcgc gcaccgcacg cactacttct acggcaaatc gcatccggtt gcggtaatcg
    16561 ccgccccact ggtcactacg ctgattggtg tgcagcgtca gaaattcgtt gatcaaatac
    16621 ccttcggacc ccattacctc tacaccgtcg tatcctgcct cccgtgccag ttgcgcgcag
    16681 tgggcgaaat cgtcgatcag ttgcaggatc tcttcatggg tgagttcgtg aggaacgaaa
    16741 cggttgatgg gggcctgcaa tgcggaggga gcgaccagat gcggttggta gctgtagcgc
    16801 ccggtatgca aaatttgcag ggctattttg ccgccttcct gatgtaccgc ttcggtaatg
    16861 gtgcgatggt gtgggatctg gctggcgtcg ttgagcattg cgccaccttc catgccaacg
    16921 cctgttaaat ctggtgcaat gccgccgctg acaatcagcg ccacgccgtg acgggcgcgt
    16981 tcggcataaa acgctgccag ccgctcggca ccgtccgggt attcctccag cccggtgtgc
    17041 attgagccca tcaacacgcg gttttttaac gtggtaaaac ctaaatccag cggggcgaac
    17101 agcgacgggt agctcataaa attgtccagt atgtaaaata attgttatgt ggtcggatga
    17161 gttctaattt agccgtcgcc ggagaaaagg gaaaagggga gtgcggggtt tgtgatggga
    17221 ttcaaaaaga atacgcccgg tggtaacgcc ggatgcgacg cttgccgtgt tttatccggc
    17281 caggaggatt gcacatgtag ggcggataag gcgtttacgc cgcatccgcc agcagttgca
    17341 aattattgct tacggaaaaa atcgttatac aacatataca aatgcgcggc actccaggag
    17401 aaatttggtg cgccttgctg cgcgccagtc agcgggttgt aattctcctg aattgggcca
    17461 tcggcggtta atcctttggc gtgccggaag aacgtatccg ccagcttcag ggcatcatca
    17521 cgataaccgt aacgctccat ccctttcaga gcaaaccaga actgatccac ccatacgcgc
    17581 ccgcgccagt agatatcagc gccaaaagcc ggattggtta acgccgccgt tcccagcggg
    17641 acaaaggtgt tgaactcttt aggatcgagc atcaccttca ccaccgcgtc ggcattggcc
    17701 tgcgttgccg caccgttaaa cagcggcgac cagccttccg gccctttacc gcgctcaaca
    17761 atcggtttgc ccgcgcagcc gttcgccagt ggtttatctt caatacgtac gtcatagtag
    17821 aactgggtag tcgggtcgaa catacaggtg ttgatgtagt ccgcgagctg ctgtgccaac
    17881 tggcgatagc gtttggcctc ttctggctta ccgaggatgg ttgccatctc cgccagataa
    17941 tggttatcgc tgtacatata gctggcctga tccaccgact cctgcaatag cgagtagccc
    18001 agcaacgttc cgtcctgact gcggttttcg gcgaatttca ccgtccagtc gctacgtttg
    18061 ccaccattag cgacatattt atccaactgt tctttgtcga taaaaccaaa gacggcggca
    18121 tcatcacgcc ccgattccca cgacgcagcg acctgtgccg gaatttccag actgtcgtac
    18181 tggcctttct ccaccacgcg ggcgtagttg ttcagcccag actgcgtctc ttctttgttg
    18241 cctttcttca ccgcaaacag catctcgccg ctctcagtgt tgtgggcttt gtcgcgggtc
    18301 gcgccatatt ccggcacgcc gttgccgttg tgatcgcggt tacgtaacca ccagtcgtga
    18361 taggcgacca gtttcgggta catctctgcc aaccaggctt tatcctgggt gacgttgtac
    18421 acttctatca ccgaccaggc ggcaaggctg ggtttggtat tacgttcgtt ccagttgccg
    18481 ccatcgccac cacgctcggg gctaaggttc cacgctatca ggtcggggac aaagcccaca
    18541 tcctgcggac gcacgcggtc gccaggctgg atctgccagg agaagaccgc gcggatattc
    18601 tctttggcga tgtccggatt gaaatgcgcc atcgcaaacg cctgcttcta ggtatcccac
    18661 ggccaggtct gattgccgga gaaccagcgc ccggtcaccg acggtgtaac ggtgttaaat
    18721 ttcaccgcac cgcccggtga gcgccagtta ccgttgagcg tttcgatcgc tttcaccgcg
    18781 acgcgcgtct gttccggcgt cgcatccgga ttggttaacc ctttcttcag gtattcttcc
    18841 cagcgttgct gcgaggcggt gagataaaac gccggacgcg ccagaatatc gcggatctgc
    18901 atttgctctt tgctaacttc ctgagcggtc agcagatggg aataggtggt gtagagcgtg
    18961 gtcgaaccgt tgatatgcgc cttactggta aagcgattac cgttgatttc agtctgcacc
    19021 ggcagggatt tatgcacctg atattccgat tcgccggagg tcagcagatc ccaggtggcg
    19081 cgcactttgc caaaggtgac tttcaggcca tcacgggtgg cgctgatttt gcgctgatag
    19141 tcagggtatt cgccagcaat ggttttatcg gaaagcggtt tcccttcttt cgcttccagt
    19201 ttttccagca gttcgccgtc ccacaccaga tccagcggtt tattgctggt gattttggtt
    19261 tccagtagtg acgtgcgcgg cgtggcgaag cgcagagtca tttcgacttg cacatctttt
    19321 gctgtcagtt tttgcaccag cgcaccggga atactgtatg cctccagcgt aaagtcgact
    19381 ttcttgccgt cctgccagac ggtcaggcgg tcgaaattgc tggccataaa gttgatgtac
    19441 tcttccgtca gcagcgcaac gcccggaaag ccgcccatgg tgttagggcc gtctggcaac
    19501 agatgaccat gccaggctcc gagatcgaaa aacggattaa aacgctggtg atcgtcgtaa
    19561 tcgtaatcct tcatgtactg cggcgcgcca gtacggttaa tcacgttttt ataattgtcg
    19621 gcgttagcgg catgggcgga aaaacttatc agcagagcgc aggttactgg cgttaaaata
    19681 gtttttattt tcatgaaatt acagtcctta ttaccagtag aaatattgca tcaggaagat
    19741 ttggtcgctg ggatcgtgag aggcattttt catgtagaag cggctatcaa aagccgtggc
    19801 gaaacgtccg ccgccgtatt cgtaccagat accaaactgc atgaaagagg tggtttcatc
    19861 gtcagcgtgg tcagggcgat gtttggcgta ggtgtaagcg gtggagagat aaacgccctt
    19921 taacgcttca tacatggcgc tcaccatcat cccactttca cttcccggta cgtccagccc
    19981 gtcggcgcgt ccggtatggt gccaggcgcg agcggcaaag ttaggagtta gcaggcccgt
    20041 gagatagagc tgtcctgtgc cgtcggtgat ttccagaccg ttcatccagg tgatgccttc
    20101 ggcaaggtca tactggatgt aaccgttcat cattgccgga taggtgtatt tgtcgtcata
    20161 gcgatcgtat ttgccaaaat gtagccaggc tttgctttca tcatgatgtc cggcaggagt
    20221 cgcggtgacg ctataacgaa agttgccgct taagttctgt accttcagcg cagtcataat
    20281 gtcgcgggta ttgggaatga cgtagcccag atcgggggtg aaatcgcccc accattgcag
    20341 gtcatccagc gaggaatcct gacgcagact gagcatgatt tcggtgccat cattggtacg
    20401 ataaccgcca tagaaacggt taattccgcc ctcgaaacca ccccagctat ggtctggca
//
LOCUS       DADMJE010000065        20405 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.066, whole genome shotgun sequence.
ACCESSION   DADMJE010000065 DADMJE010000000
VERSION     DADMJE010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20405
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.066"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            127..942
                     /locus_tag="JN001_002119"
     CDS             127..942
                     /locus_tag="JN001_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HAY9053348.1"
                     /translation="MAQINRISITLCALLFTTLPLTPMAHASKQARESSATTHITKKA
                     DKKKSTATTKKTQKTAKKAASKSTTKSKTASSVKKSSITASKNAKTRSKHAVNKTASA
                     SFTEKCTKRKGYKSHCVKVKNAASGTLADAHKAKVQKATKVAMNKLMQQIGKPYRWGG
                     SSPRTGFDCSGLVYYAYKDLVKIRIPRTANEMYHLRDAAPIERSELKNGDLVFFRTQG
                     RGTADHVGVYVGNGKFIQSPRTGQEIQITSLSEDYWQRHYVGARRVMTPKTLR"
     gene            1070..1651
                     /gene="sodB"
                     /locus_tag="JN001_002120"
     CDS             1070..1651
                     /gene="sodB"
                     /locus_tag="JN001_002120"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020079002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase [Fe]"
                     /protein_id="HAY9053349.1"
                     /translation="MSFELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIK
                     GTAFEGKSLEEIIRSSEGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFG
                     SFADFKAQFTDAAIKNFGSGWTWLVKNSDGKLAIVSTSNAGTPLTTDATPLLTVDVWE
                     HAYYIDYRNARPGYLEHFWALVNWEFVAKNLAA"
     gene            complement(1797..2972)
                     /locus_tag="JN001_002121"
     CDS             complement(1797..2972)
                     /locus_tag="JN001_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053350.1"
                     /translation="MKINYPLLALALAIGAFGIGTTEFSPMGLLPVIARGVDVSIPAA
                     GMLISAYAVGVMVGAPLMTLLLSHRARRSALIFLMAIFTLGNVLSAIAPDYMTLMLSR
                     ILTSLNHGAFFGLGSVVAASVEPKHKQASAVATMFMGLTLANIGGVPAATWLGETIGW
                     RMSFLATAGLGVISMVSLFFSLPKGGAGARPEVKKELAVLMRPQVLSALLTTVLGAGA
                     MFTLYTYISPVLQSITHATPVFVTAMLVLIGVGFSIGNYPGGKLADRSVNGTLKGFLL
                     LLMVIMLAIPFLARNEFGAAISMVVWGAAAFAVVPPLQMRVMRVASEAPGLSSSVNIG
                     AFNLGNALGAAAGGAVISAGLGYSFVPVMGAIVAGLALLLVFMSARKQPETVCVANS"
     gene            complement(3138..3227)
                     /gene="ynhF"
                     /locus_tag="JN001_002122"
     CDS             complement(3138..3227)
                     /gene="ynhF"
                     /locus_tag="JN001_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein YnhF"
                     /protein_id="HAY9053351.1"
                     /translation="MSTDLKFSLVTTIIVLGLIVAVGLTAALH"
     gene            3526..4551
                     /gene="purR"
                     /locus_tag="JN001_002123"
     CDS             3526..4551
                     /gene="purR"
                     /locus_tag="JN001_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional repressor PurR"
                     /protein_id="HAY9053352.1"
                     /translation="MATIKDVAKRANVSTTTVSHVINKTRFVAEETRNAVWAAIKELH
                     YSPSAVARSLKVNHTKSIGLLATSSEAAYFAEIIEAVEKNCFQKGYTLILGNAWNNLE
                     KQRAYLSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVID
                     NAFEGGYMAGRYLIERGHREIGVIPGPLERNTGAGRLAGFMKAMEEAMIKVPESWIVQ
                     GDFEPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLRVPQDVSLIGYDN
                     VRNARYFTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIEVHPRLIERRSVADG
                     PFRDYRR"
     gene            complement(4548..5480)
                     /locus_tag="JN001_002124"
     CDS             complement(4548..5480)
                     /locus_tag="JN001_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9053353.1"
                     /translation="MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWL
                     AVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIV
                     RPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAF
                     RDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKR
                     VVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQND
                     MSPALTWLLEYLGDSETLNKEWLREPEETPATGD"
     gene            5593..6804
                     /locus_tag="JN001_002125"
     CDS             5593..6804
                     /locus_tag="JN001_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bcr/CflA family multidrug efflux MFS
                     transporter"
                     /protein_id="HAY9053354.1"
                     /translation="MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVS
                     ASLSLFLAGFAAAQLLWGPLSDRYGRKPVLLIGLTIFALGSLGMLWVENAATLLVLRF
                     VQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQ
                     AIFATLFAITVVLILPIFWLKPTTKAGNNSQDGLTFTDLLRSKTYRGNVLIYAACSAS
                     FFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLV
                     LFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAA
                     LQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEAGCQNH
                     GNAEVAHSESH"
     gene            7095..8243
                     /gene="cfa"
                     /locus_tag="JN001_002126"
     CDS             7095..8243
                     /gene="cfa"
                     /locus_tag="JN001_002126"
                     /EC_number="2.1.1.79"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane fatty acyl phospholipid synthase"
                     /protein_id="HAY9053355.1"
                     /translation="MSSSCIEEVSVPDDNWYRIANELLSRAGIAINGSAPADIRVKNP
                     DFFKRVLQEGSLGLGESYMDGWWECDRLDMFFSKVLRAGLENQLPHHFKDTLRIAGAR
                     LFNLQSKKRAWIVGKEHYDLGNDLFSRMLDPFMQYSCAYWKDADNLESAQQAKLKMIC
                     EKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSMVGVTISAEQQKMAQERCEGLDVTIL
                     LQDYRDLNDQFDRIVSVGMFEHVGPKNYDTYFAVVDRNLKPEGIFLLHTIGSKKTDLN
                     VDPWINKYIFPNGCLPSVRQIAQSSEPHFVMEDWHNFGADYDTTLMAWYERFLAAWPE
                     IADNYSERFKRMFTYYLNACAGAFRARDIQLWQVVFSRGVENGLRVAR"
     gene            complement(8283..8924)
                     /gene="ribE"
                     /locus_tag="JN001_002127"
     CDS             complement(8283..8924)
                     /gene="ribE"
                     /locus_tag="JN001_002127"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HAY9053356.1"
                     /translation="MFTGIVQGTAKLVSIDEKPNFRTHVVELPDHMLDGLETGASVAH
                     NGCCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVERAAKFSDEIGGHLMSGH
                     IMTTAEVAKILTSENNRQIWFKVQDSQLMKYILYKGFIGIDGISLTVGEVTPTRFCVH
                     LIPETLERTTLGKKKLGARVNIEIDPQTQAVVDTVERVLAARENAMNQPGTEA"
     gene            9139..10512
                     /gene="mdtK"
                     /locus_tag="JN001_002128"
     CDS             9139..10512
                     /gene="mdtK"
                     /locus_tag="JN001_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter MdtK"
                     /protein_id="HAY9053357.1"
                     /translation="MQKYISEARLLLALAIPVILAQIAQTAMGFVDTVMAGGYSATDM
                     AAVAIGTSIWLPAILFGHGLLLALTPVIAQLNGSGRRERIAHQVRQGFWLAGFVSVLI
                     MLVLWNAGYIIRSMENIDPALADKAVGYLRALLWGAPGYLFFQVARNQCEGLAKTKPG
                     MVMGFIGLLVNIPVNYIFIYGHFGMPELGGVGCGVATAAVYWVMFLAMVSYIKRARSM
                     RDIRNEKGTAKPDPAVMKRLIQLGLPIALALFFEVTLFAVVALLVSPLGIVDVAGHQI
                     ALNFSSLMFVLPMSLAAAVTIRVGYRLGQGSTLDAQTAARTGLMVGVCMATLTAIFTV
                     SLREQIALLYNDNPEVVTLAAHLMLLAAVYQISDSIQVIGSGILRGYKDTRSIFYITF
                     TAYWVLGLPSGYILALTDLVVEPMGPAGFWIGFIIGLTSAAIMMMLRMRFLQRLPSVI
                     ILQRASR"
     gene            complement(10553..11809)
                     /locus_tag="JN001_002129"
     CDS             complement(10553..11809)
                     /locus_tag="JN001_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053358.1"
                     /translation="MGSDAKNLMSDGNVQIVKTGEVIGATQLTEGELIVEAGGRAENT
                     VVTGAGWLKVATGGIAKCTQYGNNGTLSVSDGAIATDIVQSEGGAISLSTLATVNGRH
                     PEGEFSVDQGYACGLLLENGGNLRVLEGHRAEKIILDQEGGLLVNGTTSAVVVDEGGE
                     LLVYPGGEASNCEINQGGVFMLAGKASDTLLAGGTMNNLGGEDSDTIVENGSIYRLGT
                     DGLQLYSSGKTQNLSVNVGGRAEVHAGTLENAVIQGGTVILLSPTSADENFVVEEDRA
                     PVELTGSVALLDGASMIIGYGADLQQSTITVQQGGVLILDGSTVKGDGVTFIVGNINL
                     NGGKLWLITGAATHVQLKVKRLRGEGAICLQTSAKEISPDFINVKGEVTGDIHVEITD
                     ASRQTLCNALKLQPDEDGIGATLQPA"
     gene            12117..12193
                     /locus_tag="JN001_002130"
     tRNA            12117..12193
                     /locus_tag="JN001_002130"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12151..12153,aa:Val,seq:gac)
     gene            12198..12274
                     /locus_tag="JN001_002131"
     tRNA            12198..12274
                     /locus_tag="JN001_002131"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:12232..12234,aa:Val,seq:gac)
     gene            12382..12687
                     /locus_tag="JN001_002132"
     CDS             12382..12687
                     /locus_tag="JN001_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monooxygenase"
                     /protein_id="HAY9053359.1"
                     /translation="MATLLQLHFAFNGPFGDAMAEQLKPLAESINQEPGFLWKVWTES
                     EKNHEAGGIYLFTDEKSALAYLEKHTARLKNLGVEEVVAKVFDVNEPLSQINQAKLA"
     gene            12813..14417
                     /locus_tag="JN001_002133"
     CDS             12813..14417
                     /locus_tag="JN001_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-NAD(P)-binding protein"
                     /protein_id="HAY9053360.1"
                     /translation="MKKIAIVGAGPTGIYTLFSLLQQQTPLSISIFEQADEAGVGMPY
                     SDEENSKMMLANIASIEIPPINCTYLEWLQKQEASHLQRYGVKKETLHDRQFLPRILL
                     GEYFRDQFLRLVDQARQQKFAVAVYESCQVTDLQITNAGVMLATNQDLPSETFDLAVI
                     ATGHVWPDEEEATRTYFPSPWSGLMEAKVDACNVGIMGTSLSGLDAAMAVAIQHGSFI
                     EDDKQHVVFNRDNASEKLNITLMSRTGILPEADFYCPIPYEPLHIVTDQALNAEIQKG
                     EEGLLDRVFRLIVEEIKFADPDWSQRIALESLNVDSFVQAWFAERKQRDPFDWAEKNL
                     QEVERNKREKHTVPWRYVILRLHEAVQEIVPHLNEHDHKRFSKGLARVFIDNYAAIPS
                     ESIRRLLALREAGIIHILALGEDYEMEINESRTVLKTEDNSYSFDVFIDARGQRPLKV
                     KDIPFPGLREQLQKTGDEIPDVGEDYTLQQPEDIRGRVAFGALPWLMHDQPFVQGLTA
                     CAEIGEAMARAVVKPASRARRRLSFD"
     gene            complement(14429..15241)
                     /locus_tag="JN001_002134"
     CDS             complement(14429..15241)
                     /locus_tag="JN001_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053361.1"
                     /translation="MIITRADLREWRIGAVMYRWFLRHFRRGGSYADIHHALIEEGYT
                     DWAESLVEYAWKKWLADENFAHQEVSSMQKLATDPGEIPFCSQFARSDDHARIGCCED
                     NARIAIAGYAAQIASMGYSVRIGSVGFNSHIGSSGERARVAVTGNSSRISSAGDSSRI
                     ANTGMRVRVCTLGERCHVASNGDLVQIASFGANARIANSGDNVHIIASGENSTVVSTG
                     VVDSIILGSGGSAALAYHDGERVRFAVAIEGENNIRTGVRYRLNEQHQFVEC"
     gene            complement(15245..16030)
                     /locus_tag="JN001_002135"
     CDS             complement(15245..16030)
                     /locus_tag="JN001_002135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate reductase cytochrome B subunit"
                     /protein_id="HAY9053362.1"
                     /translation="MNPSQHAEQFQSQLANYVPQFTPEFWPVWLIIAGVLLVGMWLVL
                     GLHALLRARGVKKSATDHGEKVYLYSKAVRLWHWSNALLFVLLLASGLINHFAMVGAT
                     AVKSLVAVHEVCGFLLLACWLGFVLINAVGDNGHHYRIRRQGWLERAAKQTRFYLFGI
                     MQGEEHPFPATTQSKFNPLQQVAYVGVMYGLLPLLLLTGLLCLYPQAVGDVFPGVRYW
                     LLQAHFALAFISLFFIFGHLYLCTTGRTPHETFKSMVDGYHRH"
     gene            complement(16027..16695)
                     /locus_tag="JN001_002136"
     CDS             complement(16027..16695)
                     /locus_tag="JN001_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416186.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY9053363.1"
                     /translation="MSFTRRKFVLGMGTVIFFTGSASSLLANTRQEKEVRYAMIHDES
                     RCNGCNICARACRKTNHVPAQGSRLSIAHIPVTDNDNETQYHFFRQSCQHCEDAPCID
                     VCPTGASWRDEQGIVRVEKSQCIGCSYCIGACPYQVRYLNPVTKVADKCDFCAESRLA
                     KGFPPICVSACPEHALIFGREDSPEIQAWLQDNKYYQYQLPGAGKPHLYRRFGQHLIK
                     KENV"
     gene            complement(16759..17397)
                     /locus_tag="JN001_002137"
     CDS             complement(16759..17397)
                     /locus_tag="JN001_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707570.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdhW family putative oxidoreductase system
                     protein"
                     /protein_id="HAY9053364.1"
                     /translation="MNHRDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAE
                     FIRQHSAAGQLVARAVFLSPPYSVAEEELSVLLESIKQNGDYADIACMTGSQDDYYYS
                     TQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEA
                     AIAAMDVAPEYADIRQVESSTAELYLFSERFMTYGKAYGLCEWFEVEQFQNP"
     gene            complement(17410..19512)
                     /locus_tag="JN001_002138"
     CDS             complement(17410..19512)
                     /locus_tag="JN001_002138"
                     /EC_number="1.2.7.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde ferredoxin oxidoreductase"
                     /protein_id="HAY9053365.1"
                     /translation="MANGWTGNILRVNLTTGNITLEDSSKFKSFVGGMGFGYKIMYDE
                     VPPGTKPFDEANKLVFATGPLTGSGAPCSSRVNITSLSTFTKGNLVVDAHMGGFFAAQ
                     MKFAGYDVIIIEGKAKSPVWLKIKDDKVSLEKADFLWGKGTRATTEEICRLTSPETCV
                     AAIGQAGENLVPLSGMLNSRNHSGGAGTGAIMGSKNLKAIAVEGTKGVNIADRQEMKR
                     LNDYMMTELIGANNNHVVPSTPQSWAEYSDPKSRWTARKGLFWGAAEGGPIETGEIPP
                     GNQNTVGFRTYKSVFDLGPAAEKYTVKMSGCHSCPIRCMTQMNIPRVKEFGVPSTGGN
                     TCVANFVHTTIFPNGPKDFEDKDDGRVIGNLVGLNLFDDYGLWCNYGQLHRDFTYCYS
                     KGVFKCVLPAEEYAEIHWDQLEAGDVNFIKDFYYRLAHRVGELSHLADGSYAIAERWN
                     LGEEYWGYAKNKLWSPFGYPVHHANEASAQVGSIVNCMFNRDCMTHTHINFIGSGLPL
                     KLQREVAKELFGSEDAYDETKNYTPINDAKIKYAKWSLLRVCLHNAVTLCNWVWPMTV
                     SPLKSRNYRGDLALEAKFFKAITGEEMTQEKLDLAAERIFTLHRAYTVKLMQTKDMRN
                     EHDLICSWVFDKDPQIPVFTEGTDKMDRDDMHASLTMFYKEMGWDPQLGSPTRETLQR
                     LGLEDIAADLAAHNLLPV"
     gene            complement(19482..20159)
                     /locus_tag="JN001_002139"
     CDS             complement(19482..20159)
                     /locus_tag="JN001_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001070231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin-like protein"
                     /protein_id="HAY9053366.1"
                     /translation="MNPVDRPLLDIGLTRLEFLRISGKGLAGLTIAPALLSLLGCKQE
                     DIDSGTVGLINTPKGVLVTQRARCTGCHRCEISCTNFNDGSVGTFFSRIKIHRNYFFG
                     DNGVGSGGGLYGDLNYTADTCRQCKEPQCMNVCPIGAITWQQKEGCITVDHKRCIGCS
                     ACTTACPWMMATVNTESKKSSKCVLCGECANACPTGALKIIEWKDITVRILQRKKSWL
                     TVGQVIY"
BASE COUNT         5110 a         5311 c         4764 g         5220 t
ORIGIN      
        1 tcgccaacga aacgtatttt ttaacaataa aagctattaa ctttctcttc ttctatgcat
       61 tagaatcatc aagttttgta aatcagacgc aggcatgata gacctgcctt aacagaggga
      121 cgctcagtgg cgcagataaa ccgtatttcg atcacgctct gtgctttact ttttaccacc
      181 ctgcctttaa cgcctatggc ccatgcttca aagcaagcca gggagagttc tgctaccact
      241 catatcacca aaaaagcaga taaaaagaaa agcacggcaa ccaccaaaaa gacccagaaa
      301 acagcgaaaa aagccgccag taaaagtacg accaaaagca aaaccgcttc ttccgttaaa
      361 aaatcttcca ttaccgcttc taaaaacgcc aaaactcgca gcaaacacgc cgtcaataaa
      421 acggcctcag ccagctttac cgaaaagtgt accaaacgta agggctataa atcgcattgt
      481 gtgaaagtca aaaatgccgc gtcaggaact cttgccgacg cgcacaaagc gaaggtgcaa
      541 aaagctacga aagtggcaat gaataaactg atgcagcaaa ttggtaagcc atatcgttgg
      601 ggtggcagct caccgcgtac cggttttgat tgcagcggcc tggtttatta cgcttataaa
      661 gatttggtga aaattcgtat tccgcgtacg gcgaatgaaa tgtatcacct gcgtgatgca
      721 gcgccaatcg aacgtagtga actgaaaaac ggcgacctgg tctttttccg tactcaggga
      781 cgcggcacag ccgatcatgt cggcgtgtat gtcggcaacg gcaaatttat tcagtcaccg
      841 cgcacaggtc aggaaattca aatcacttct ctcagtgaag actactggca gcgccactat
      901 gttggcgctc gtcgggtaat gaccccaaaa acacttcgct aaaactttac cctgttgtta
      961 cggcaacagg gtaagttcat cttttgtctc accttttaat ttgctaccct atccatacgc
     1021 acaataaggc tattgtacgt atgcaaatta ataataaagg agagtagcaa tgtcattcga
     1081 attacctgca ctaccatatg ctaaagatgc tctggcaccg cacatttctg cggaaactat
     1141 cgagtatcac tacggcaagc atcatcagac ttatgtcact aacctgaaca acctgattaa
     1201 aggtaccgcg tttgaaggta aatcactgga agagattatt cgcagctctg aaggtggcgt
     1261 attcaacaac gcagctcagg tctggaacca tactttctac tggaactgcc tggcaccgaa
     1321 cgccggtggc gaaccgactg gaaaagtcgc tgaagctatc gccgcatctt ttggcagctt
     1381 tgccgatttc aaagcgcagt ttactgatgc agcgatcaaa aactttggtt ctggctggac
     1441 ctggctggtg aaaaacagcg atggcaaact ggctatcgtt tcaacctcta acgcgggtac
     1501 tccgctgacc accgatgcga ctccgctgct gaccgttgat gtctgggaac acgcttatta
     1561 catcgactat cgcaatgcac gtcctggcta tctggagcac ttctgggcgc tggtgaactg
     1621 ggaattcgta gcgaaaaatc tcgctgcata ataactgatg gcaaatgcag cattgcctga
     1681 tgcgcttcgt ttaccatgcc aacgcggatg aggcgttaac agcgcattcg gcaagataaa
     1741 tcgcacgttg tcagcaactg taacgcagaa ggttatcctt ctgcgttttt gtttaattag
     1801 ctgttagcaa cgcaaactgt ttcaggttgt tttctggctg acataaacac cagcaataat
     1861 gccagtcccg cgacaatcgc tcccatcacc ggcacaaagc tgtatcccag cccagcggaa
     1921 attaccgcac caccagcagc tgctcccagc gcatttccaa gattaaaggc accaatattg
     1981 actgatgaag acagacctgg cgcttcactg gcgacacgca tcacgcgcat ctgtaacggc
     2041 ggtacgaccg caaaggctgc tgcgccccac accaccatgc taatagctgc gccgaactca
     2101 ttgcgggcca ggaacgggat tgccagcata atcaccatca acaacaacaa aaagcctttc
     2161 aacgtgccgt taactgaacg atctgccagt ttgccgccgg gatagttacc gatagagaat
     2221 ccgacaccaa tcagcaccag cattgccgtg acgaacaccg gtgttgcgtg ggtaatactt
     2281 tgcagtaccg gagagatata ggtgtagaga gtaaacattg caccagctcc cagtaccgtc
     2341 gtcagcaatg cagacaacac ctgcggacgc attaataccg ccagctcttt tttcacttca
     2401 ggtcgtgccc ctgcaccacc tttaggtaat gagaagaaca gacttaccat tgaaatcact
     2461 cccagccccg ccgttgccag aaatgacatc cgccagccga tggtttcacc caaccaggtc
     2521 gccgccggca cgccaccgat atttgccagg gttaacccca taaacatagt ggcaactgcg
     2581 ctggcctgtt tatgttttgg ctccacgctt gcggccacga ctgaacccaa accaaaaaat
     2641 gctccgtgat tcaggctggt caaaatgcgt gaaagcatca gggtcatata atccggcgcg
     2701 atggcggaaa gtacgttgcc gagcgtgaaa attgccatca ggaaaatcaa cgcactgcgg
     2761 cgggcacgat gagaaagtag aagcgtcatc agcggcgcgc caaccattac gccaactgca
     2821 taggcactga ttaacattcc ggcagcggga atcgagacat ccacaccgcg cgcaatgacg
     2881 ggcaacaagc ccattggcga gaactccgtt gtcccgatac caaacgcgcc aatcgccagc
     2941 gccagcgcca gcaacggata gttaattttc atgccttatc tccacctctt cgcgtcatta
     3001 cgcgatattc attaaagtgg cgaaagcatg acagcaatca caaaaaaatg aaaataacaa
     3061 aaagagaaaa cacttttgcc attttgctaa caaacaggaa ggagatgcga gggagaacgc
     3121 gctccctcga gaggaaatca gtgcagcgcg gcagtcaaac ccacggccac gatcaaaccg
     3181 aggacgataa tcgttgttac cagtgaaaat ttaaggtcgg tgctcatcaa gttttctcct
     3241 tttttattac cacacaaata gtgatattac gcatttttac acactgtgat gaaaaaatct
     3301 cccgtcattt ataatgataa gtgtttttac cacttcccct tttcgtcaag atcggccaaa
     3361 attccacgct tacactattt gcgtactggc cattgacccc ttcctgacgc tccgtgtcgt
     3421 ttttccggcg taccgcaaca cttttgttgt gcgtaaggtg tgtaaaggca aacgtttacc
     3481 ttgcgatttt gcaggagctg aagttagggt ctggagtgaa atggaatggc aacaataaaa
     3541 gatgtagcga aacgagcaaa cgtttccact acaactgtgt cacacgtaat caacaaaaca
     3601 cgtttcgtcg ctgaagaaac gcgcaacgcc gtgtgggcag cgattaaaga attacactac
     3661 tcccctagcg cggtggcgcg tagcctgaag gttaaccaca ccaagtctat cggtttgctg
     3721 gcgaccagca gcgaagcggc ctattttgcc gagatcattg aagcggttga aaaaaattgc
     3781 ttccagaaag gttacaccct gattctgggt aatgcgtgga acaatcttga gaaacagcgg
     3841 gcttatctgt cgatgatggc gcaaaaacgc gtcgatggtc tgctggtgat gtgttctgag
     3901 tacccagagc cgttgctggc gatgctggaa gagtatcgcc atatcccaat ggtggtgatg
     3961 gactggggtg aagcaaaagc tgacttcacc gatgcggtca ttgataacgc gttcgaaggc
     4021 ggctacatgg ccgggcgtta tctgattgaa cgcggtcacc gcgaaatcgg cgtcatcccc
     4081 ggcccgctgg aacgtaacac cggcgcaggc cgccttgccg gttttatgaa ggcgatggaa
     4141 gaagcgatga tcaaggtgcc ggaaagctgg attgttcagg gtgactttga acccgaatct
     4201 ggttatcgcg ccatgcagca aatactgtcg cagccgcatc gccctactgc cgtcttctgt
     4261 ggtggcgata tcatggcaat gggcgcactt tgtgctgctg atgaaatggg tctgcgcgtc
     4321 ccgcaggatg tttcgctgat cggttatgat aacgtgcgca acgcccgcta ttttacgccg
     4381 gcgctgacca cgatccacca gccaaaagat tcgctgggtg aaacagcgtt caacatgctg
     4441 ttggatcgta tcgtcaacaa acgtgaagaa ccgcagtcca ttgaagtgca tccgcgcttg
     4501 attgaacgcc gctccgtggc tgacggcccg ttccgcgact atcgtcgtta atcacccgtt
     4561 gcgggagtct cttccggctc ccgcagccac tccttattca gcgtctcact atcgccgaga
     4621 tactcaagca gccaggttaa cgcaggcgac atatcatttt gctgccatgt cagacaacat
     4681 gccgaatccg ggaaggggtt ttccaattca agtgctaccc acttcccctc attaagccac
     4741 ggtttggcga aatgtgttgg caccatccct atgcataatc ctgccgagat acaggttgcc
     4801 gatgattccc agtcaggcac gacaactctt ttttggttat ccagtaacca ggtaatacgt
     4861 ttaggtagcg ttcgcgaggt gtcttcgcgc accaacgacg gccagttgcg caacgtatca
     4921 tcgctgaatg ggccatccat caacgccagc gggtggtggc tggcaacaac gcaactccag
     4981 cttagcatcc ccatatcccg gaaggcataa cgaccgccta ccggaatcgc gcgtgttgcg
     5041 ccaatcgcca gttccacgcg cccgtcggaa agcgcatccc agacaccgtt gaacacttcc
     5101 tgaaagacaa gaagttcgac atcatcaaaa tggcgataaa aatcaacgat catctgccgt
     5161 gtacgttctg gcctgacaat attatccact gcgatagcta actgaccgcg ccagccgttc
     5221 gctatctgct gacattgctg gcgggtgatc tgcatttttt tgacaacaga gcgcccttct
     5281 ttgagaaacc acgctccagc agcggtcagc tccacatcac ggtgccgtcg ttcaaagagc
     5341 ggcaccgcca gccactcttc cagctgacgc acggtatagc tgaccgcaga aggaacgcga
     5401 tgcagctcct gtgccgcagc gctaaaacta ccattacgcg ctaccgcatc aacaacttcg
     5461 agtgaatatt ctgaccacat agtctgcctg caaaattttt gaaatcagtc atcaaatatt
     5521 accgtttcac aacactaatt tcactcccta cactttgcgg cggtgtttaa ttgagagatt
     5581 tagagaatat acatgcaacc tgggaaaaga tttttagtct ggctggcggg tttgagcgta
     5641 ctcggttttc tggcaaccga tatgtatctg cctgctttcg ccgccataca ggccgacctg
     5701 caaacgcctg cgtctgctgt cagtgccagc cttagtctgt tccttgccgg ttttgccgca
     5761 gcccagcttc tgtgggggcc actctccgac cgttatggtc gtaaaccggt gttattaatc
     5821 ggcctgacaa tttttgcgtt aggtagtctg gggatgctgt gggtagaaaa cgccgctacg
     5881 ctgctggtat tgcgttttgt acaggctgtg ggtgtctgcg ccgcggcggt tatctggcaa
     5941 gcgttagtga cggattatta tccttcacag aaagttaacc gaatttttgc gaccatcatg
     6001 ccgctggtgg gtctatctcc ggccctggct cctctgttag gaagctggct gctggtccat
     6061 ttttcctggc aggcgatttt cgccaccctg tttgccatta ccgtggtgct gattctgcct
     6121 attttctggc tcaaacccac gacgaaggcc ggtaacaata gtcaggatgg tctgaccttt
     6181 accgacctgc tacgttctaa aacctatcgc ggcaacgtgc tgatatacgc ggcctgttca
     6241 gccagttttt ttgcatggct gaccggttca ccgttcatcc ttagtgaaat gggctacagc
     6301 ccggcagtta ttggtttaag ttatgtcccg caaactatcg cgtttctgat tggtggttat
     6361 ggctgtcgcg ccgcgctgca gaaatggcaa ggcaagcagt tattaccgtg gttgctggtg
     6421 ctgtttgctg tcagcgtcat tgcgacctgg gctgcgggct tcattagcca tgtgtcgctg
     6481 gtcgaaatcc tgatcccatt ctgtgtgatg gcgattgcca atggcgcgat ctaccctatt
     6541 gttgtcgccc aggcgctgcg tcccttccca cacgcaactg gtcgcgccgc agcgttgcag
     6601 aacactctac aactgggtct gtgcttcctc gcaagtctgg tagtttcctg gcttattagt
     6661 atcagcacgc cattgctcac caccaccagc gtgatgttat caacagtagt gctggtcgcg
     6721 ctgggttaca tgatgcaacg ttgtgaagaa gctggctgcc agaatcatgg caatgccgaa
     6781 gtcgctcata gcgaatcaca ctgatctata tcgatatact tatacttagg ctgctaacaa
     6841 aattttgttg tatgattgaa attagcggcc tatactaatt tcgagttgtt aaagctacga
     6901 taaatattat gtttttacgg ggacaggatc gttcccgact cactatggat ggtcatttcg
     6961 gcaagggttc ctcctttccc tctgttctac gtcggattat agactcgcgg ttttttctgc
     7021 gagatttctc acaaagccca aaaagcgtct acgctgtttt aaggttctga tcaccgacca
     7081 gtgatggaga aactatgagt tcatcgtgta tagaagaagt cagcgtaccg gatgacaact
     7141 ggtaccgtat cgccaacgaa ttacttagcc gtgccggtat agccattaac ggttctgccc
     7201 cggcggatat tcgtgtgaaa aaccccgatt tttttaaacg cgttctgcaa gaaggctctt
     7261 tggggttagg cgaaagttat atggatggct ggtgggaatg tgaccgactg gatatgtttt
     7321 ttagcaaagt cttacgcgca ggtctcgaga accaactccc ccatcatttc aaagacacgc
     7381 tgcgtattgc cggcgctcgt ctcttcaatc tgcagagtaa aaaacgtgcc tggatagtcg
     7441 gcaaagagca ttacgatttg ggtaatgact tgttcagccg catgcttgat cccttcatgc
     7501 aatattcctg cgcttactgg aaagatgccg ataatctgga atctgcccag caggcgaagc
     7561 tcaaaatgat ttgtgaaaaa ttgcagttaa aaccagggat gcgcgtactg gatattggct
     7621 gcggctgggg cggactggca cactacatgg catctaatta tgacgtaagc atggtgggcg
     7681 tcaccatttc tgccgaacag caaaaaatgg ctcaggaacg ctgtgaaggc ctggatgtca
     7741 ccattttgct gcaagattat cgtgacctga acgaccagtt tgatcgtatt gtttctgtgg
     7801 ggatgttcga gcacgtcgga ccgaaaaatt acgataccta ttttgcggtg gtggatcgta
     7861 atttgaaacc ggaaggcata ttcctgctcc atactatcgg ttcgaaaaaa accgatctga
     7921 atgttgatcc ctggattaat aaatatattt ttccgaacgg ttgcctgccc tctgtacgcc
     7981 agattgctca gtccagcgaa ccccactttg tgatggaaga ctggcataac ttcggtgctg
     8041 attacgatac tacgttgatg gcgtggtatg aacgattcct cgccgcatgg ccagaaattg
     8101 cggataacta cagtgaacgc tttaaacgga tgtttaccta ttatctgaat gcctgcgcag
     8161 gtgctttccg cgcccgtgat attcagctct ggcaggtcgt gttctcacgc ggtgttgaaa
     8221 acggccttcg agtcgctcgc taaaggctat tctatcgccc cctctccggg ggcgatttca
     8281 gatcaggctt ctgtacctgg ttgattcatg gcattttctc gtgccgccag cacacgttct
     8341 accgtatcta ccactgcctg agtttgtgga tcaatttcaa tgttgacgcg tgcgccgagt
     8401 tttttcttcc caagagtcgt gcgttccaga gtttccggaa ttaaatggac gcaaaaacgc
     8461 gttggcgtga cttcgccgac ggtcaggcta ataccgtcga tgccaataaa tcctttgtac
     8521 aggatatatt tcatcaactg actatcctgg actttaaacc agatctggcg attattttcc
     8581 gaggttaata ttttcgccac ttcagcggtg gtcataatat gacctgacat taagtgtccg
     8641 ccaatttcat cactgaattt cgccgcacgc tcaacgttta cccaatcccc cacttttaaa
     8701 tcgccaagat tggtaatgcg taacgtttct ttcatcaggt caaaactgac atggttgccg
     8761 ttaatttccg tcacggtcag gcagcaaccg ttatgcgcca cggaagcacc ggtttccagg
     8821 ccgtccagca tgtggtcggg taactccacc acatgcgtac gaaaatttgg tttctcgtca
     8881 atcgacacca gttttgcggt gccctgtaca atccccgtaa acatacttac aactcctgaa
     8941 atcagttaag acattctgtt cagcacaata gcaggtggca aacgccctta ccagtgaagg
     9001 ggtaagaatg actatttttt cactggagaa ttaataaatc ctcgctacaa tagactgaat
     9061 ttcccctgct tcttcttttt gctgcccatt caggcggctt tttagtctct catataacta
     9121 caaataaaag gtgttcacgt gcagaagtat atcagtgaag cgcgtctgtt attagcatta
     9181 gcaatcccgg tgattctcgc gcaaatcgcc caaactgcga tgggttttgt cgataccgtg
     9241 atggcgggcg gctatagtgc caccgacatg gcggcggtcg ctatcggtac ttctatctgg
     9301 cttccggcga tcctctttgg tcacggactg ctgctggcat taacgccggt tatcgcgcaa
     9361 ttaaatggtt ccggtcgacg tgagcgcatt gcgcatcagg tgcgacaagg tttctggctg
     9421 gcaggttttg tttccgttct cattatgctg gtgctgtgga atgcaggtta cattatccgc
     9481 tccatggaaa acatcgatcc ggctctggcg gacaaagccg tgggttatct gcgtgcgttg
     9541 ttgtggggcg cgccgggcta tctgttcttc caggttgccc gtaaccaatg tgaaggtctg
     9601 gcaaaaacca agccgggtat ggtaatgggc tttatcggcc tgctggtgaa cattccggtg
     9661 aactatatct ttatttatgg tcatttcggt atgcctgagc tcggtggcgt tggttgtggc
     9721 gtggctactg cggcggtgta ttgggtcatg ttccttgcca tggtttctta cattaaacgc
     9781 gcccgctcca tgcgcgatat tcgtaacgaa aaaggcaccg cgaaacccga tcctgcggtt
     9841 atgaaacgac tgattcaact cggtttaccg attgcgctgg cactattctt tgaagtgaca
     9901 ctgtttgccg tcgtggctct gttagtgtct ccgctcggta ttgttgatgt cgcaggacac
     9961 cagattgccc tgaactttag ttcactgatg tttgtgcttc caatgtcgct ggcggcagcg
    10021 gtaactatcc gcgtaggtta tcgtctgggt cagggctcaa cgctggatgc gcaaaccgct
    10081 gcgcggaccg ggcttatggt gggtgtctgt atggcaaccc tgacggccat tttcacggtt
    10141 tcactccggg agcaaatcgc cctgttgtac aacgacaatc ccgaggttgt aacgctggct
    10201 gcgcatttga tgttgctggc ggcggtatat cagatttctg actcaatcca ggtgattggc
    10261 agtgggattt tgcgtggtta taaagatacg cgttccattt tctatatcac ctttacagct
    10321 tactgggtgc tgggcttgcc aagcggctat attctggcac tgaccgatct ggtcgttgaa
    10381 cctatggggc cagcaggctt ctggataggc tttattatcg gcctgacatc ggcagccatt
    10441 atgatgatgt tgcgtatgcg gttcctgcaa cgtctgccgt cagttatcat tctgcaacga
    10501 gcatcccgct aataaagaca aggcgcaacc ttcacgggtt gcgcctgtgt ttttacgcag
    10561 gctggagcgt tgcgccaatc ccgtcttcgt ctggctgtaa tttcagagcg ttgcacagag
    10621 tttgccgact ggcatctgtt atctcaacgt gtatatcacc ggtaacttcc cctttcacat
    10681 tgatgaagtc aggtgagatt tctttcgcac tggtttgcag gcaaatcgct ccctctccgc
    10741 gcaggcgttt cactttcagt tgcacatgcg ttgccgcacc agtgatcagc cacagttttc
    10801 cgccattcag attgatgtta ccaacaataa aagtgacacc gtcacctttt accgtactgc
    10861 cgtcgagaat caacacaccg ccctgctgta cagtaatcgt tgattgttgc agatctgcgc
    10921 catagccaat aatcattgaa gcgccgtcca gtaatgcaac actcccggtc agttcaaccg
    10981 gtgcgcgatc ttcctctacg acaaaatttt cgtccgcgct ggtgggtgac aacaggatca
    11041 ctgttccacc ttgtattacc gcattttcca gcgtaccggc atgcacttca gcccgaccac
    11101 ccacattcac ggacaggttt tgcgtcttac cggaactgta gagctgaagg ccatccgtcc
    11161 ccagacgata aatggatcca ttctcaacaa tggtgtcaga gtcttcacca ccgagattat
    11221 tcatggtgcc accagcaagc aacgtatcac tggctttccc ggccagcata aaaacgccgc
    11281 cctgattaat ctcacaattg ctggcttccc cacctggata caccaacaat tcaccacctt
    11341 catctaccac gaccgctgag gttgtcccat taaccaacag gccgccctct tgatcgagaa
    11401 tgattttttc cgcgcgatgt ccttccagta cacgcaggtt accgccattt tccagcaaca
    11461 aaccgcaggc ataaccctga tcaacgctaa attcaccttc gggatggcgg ccattaaccg
    11521 tagcgagcgt agagagacta attgcgcctc cctcggactg aacaatatct gtggcaatgg
    11581 caccgtcgct gaccgatagc gtgccattgt taccgtactg tgtgcatttg gcgatcccac
    11641 cggttgccac tttcaaccag ccagcccccg tgactacggt attttcggct cttccgccag
    11701 cttcaacaat caactcgcct tcagtaagtt gcgtcgcgcc aatgacctcg ccggtcttaa
    11761 caatttgcac attcccgtcg ctcatcaagt ttttcgcatc agatcccatg atttattcct
    11821 ttgctgcatc tgtgtgcctt tattgctacc taaatgtaaa ggctacggag gatttatcca
    11881 cgacagattt gagatggtgg caaacaactc tgtttaaact ctgatacacg aattattggg
    11941 ttgtatcaga tgtaaatgcg atcctgaata aaaatcgccc ttgcaaatca acaaaatata
    12001 gccaatttgc ttaaaagctc tgcaaacggt cgaaatagcg cagaaaatta cgttttgcct
    12061 cttgccacct tcccactctg ccgctaatat tcgtccccgt tgtcacctac aacgttgcgt
    12121 tcatagctca gttggttaga gcaccacctt gacatggtgg gggtcgttgg ttcgagtcca
    12181 attgaacgca ccatcctgcg tccgtagctc agttggttag agcaccacct tgacatggtg
    12241 ggggtcggtg gttcgagtcc actcggacgc accagatttt cttaatctgg tcttctcctt
    12301 tttccctctg tttcttctct gtatccaata cgttaaaaga tttacactgt cttcgtatgc
    12361 gttatcagaa ggagaatcgc tatggcaact ttgttacaac ttcattttgc ttttaatggc
    12421 ccatttggcg acgcaatggc tgagcagctt aaaccgcttg ctgagtcgat taatcaggaa
    12481 cctggttttc tgtggaaggt atggacagaa agtgaaaaga accacgaagc cggtgggatc
    12541 tatcttttta ctgatgaaaa aagcgccctt gcctatctgg aaaaacatac tgcccgactt
    12601 aaaaatctcg gcgttgagga agttgtcgcc aaagttttcg atgtcaatga gccactgagt
    12661 caaatcaatc aggcaaaact cgcctgacag aatttaatca agggcggtta gcgccctttt
    12721 catccctgtc tgaaatttct caaattctaa aaatctcaac caaacttatc tgataacact
    12781 aaattcgaaa gaatgcgtac aggtaagtaa caatgaaaaa aattgctatt gtgggtgccg
    12841 ggcctacggg gatctacacc ttattctcgc ttctacagca acaaactcca ctttctattt
    12901 ctatcttcga gcaggctgac gaggccggtg tcgggatgcc atacagtgat gaggaaaact
    12961 caaaaatgat gctggcaaat attgccagta ttgaaatacc gccgattaat tgtacgtatc
    13021 tcgaatggct acaaaagcaa gaagccagcc atctccagcg ttatggcgtt aaaaaagaaa
    13081 ccttgcacga tcgtcagttt ttaccgcgaa ttctgctggg cgaatatttc cgcgatcaat
    13141 ttttacgatt agtagaccag gcacgacagc aaaaatttgc agtggctgtt tatgaatcat
    13201 gccaggttac cgatctgcaa attacaaatg ctggcgtcat gctcgctaca aatcaggatt
    13261 tacccagcga gacgtttgat ttagcggtga ttgccacggg tcacgtctgg cctgatgaag
    13321 aagaagcaac cagaacgtat tttcccagtc cgtggtcagg cctgatggaa gcaaaggtcg
    13381 atgcgtgtaa cgtgggtatt atgggaacat ccttgagcgg actggatgcg gcaatggcag
    13441 tggctattca gcatggttcg ttcattgaag atgataaaca acacgtcgtt tttaaccgcg
    13501 ataacgcaag tgaaaagcta aatattacgt tgatgtcgcg cacgggtatt ttacccgaag
    13561 ccgatttcta ttgccctatt ccctacgagc ccttacacat cgtcaccgat caggcattaa
    13621 atgctgagat tcaaaaaggt gaagagggcc ttttggatcg ggtatttaga ttgatagtag
    13681 aggaaatcaa gtttgctgat ccagactgga gccaacgcat agccttagag agcctgaatg
    13741 tcgattcctt tgttcaagcc tggtttgccg agcgcaaaca acgcgaccca tttgactggg
    13801 cagaaaaaaa tctccaggaa gtcgaacgca ataaacgaga aaaacatact gttccctggc
    13861 gttatgtcat tctgcgcctg catgaagccg tacaggaaat tgttccacat ctgaatgaac
    13921 acgaccataa acggttcagt aaaggccttg cccgggtttt tatcgataat tatgcggcaa
    13981 tcccttcaga gtctattcgt cggctgctgg ccttacgtga agcggggatc attcatattc
    14041 tcgccctcgg tgaagactac gaaatggaaa ttaatgagtc gcgcaccgtc ctgaaaacgg
    14101 aagacaacag ctactcgttt gacgttttta ttgatgcccg cggacagcgt ccgcttaaag
    14161 tgaaagatat tcctttccct gggctacgcg agcaattaca gaaaacaggg gatgaaatcc
    14221 ctgatgttgg cgaagattat acgttacagc aacccgaaga tattcgtgga cgcgtagcgt
    14281 tcggcgcgtt gccctggttg atgcacgacc agcctttcgt tcagggactt acggcatgtg
    14341 cagaaattgg tgaggcgatg gctcgggcgg tcgtaaaacc tgcatcccgt gcacgtcggc
    14401 gtctttcgtt tgattaaagg taaagctatc agcactcaac aaactgatgc tgttcattaa
    14461 gacgatagcg gactccggtt cgaatattgt tttcaccttc aatggcgacg gcgaagcgaa
    14521 ctctttcgcc gtcatgatat gccagtgcgg cgcttccccc tgacccgaga ataattgagt
    14581 cgaccacgcc cgtgctcact accgttgaat tttcaccgct ggcaatgatg tgtacattgt
    14641 cgccgctgtt ggcaattctg gcgtttgcgc caaagctggc gatttgcacc aggtcaccat
    14701 tactggcgac atgacaccgt tcacccaatg tacaaacgcg tactcgcatt ccggtattcg
    14761 caatccgact actatctcca gcgctgctta tccgcgaaga attaccggtt acagcaaccc
    14821 gtgcgcgttc accggagctg ccaatgtgac tgttaaagcc gacacttcca atccgcacgc
    14881 tataacccat actggcaatt tgcgcggcat acccagcgat tgcgattcgg gcgttatcct
    14941 cacaacagcc gatgcgagca tgatcgtcgc tgcgggcaaa ctgactgcaa aatggtatct
    15001 ctccggggtc tgtggccagt ttttgcatag aggaaacttc ctgatgcgcg aagttttcat
    15061 ccgccagcca ttttttccac gcatactcaa ccagactctc cgcccagtcc gtatatcctt
    15121 cctcaatcag tgcatgatga atatcggcat aactaccgcc gcgtcggaaa tggcgcagga
    15181 accagcgata catcaccgct ccgatacgcc attctcgcag gtctgctcgt gtaatgatca
    15241 ttcgttagtg ccggtgatag ccatcgacca tgcttttaaa ggtttcgtgt ggcgtacgcc
    15301 ccgtggtgca aagataaaga tgtccgaaga taaaaaagag gcttataaat gccagagcaa
    15361 aatgcgcctg caataaccag tatcttacgc caggaaacac atctcccacg gcttgcggat
    15421 agagacacaa cagccccgtc aatagtaaca acggcagcaa tccatacatg acaccaacat
    15481 aggcgacctg ctgtaaggga ttaaatttag actgtgttgt tgccgggaaa ggatgttctt
    15541 ccccctgcat aatgccaaac aaataaaatc gcgtttgttt tgccgctcgt tccagccacc
    15601 cctgacgacg aatgcgatag tggtgaccat tatccccaac ggcattgatc agcacaaagc
    15661 cgagccagca tgccagtaac aaaaatccgc aaacttcatg caccgcaacc agacttttaa
    15721 ccgcagttgc gcccaccatc gcaaagtgat ttatcagccc acttgccagc aacaatacaa
    15781 agagtaacgc attcgaccag tgccataatc tgaccgcttt gctgtaaaga taaaccttct
    15841 caccatgatc ggtggctgat ttcttcacgc cacgagcacg aagcaaggcg tgcagcccca
    15901 gcaccaacca catcccaacc agcaatactc cggcaatgat caaccacacc ggccaaaatt
    15961 cgggagtgaa ctgtggcaca tagttcgcta actggctctg aaactgttca gcatgttgcg
    16021 acgggttcat acattttcct ttttaatcaa atgttgaccg aaccggcgat acagatgcgg
    16081 tttcccggca ccaggtagct gatattgata gtatttatta tcctgcaacc acgcctgaat
    16141 ttctgggcta tcttcgcgac caaagatcaa tgcgtgttcc ggacaggcgc tgacgcaaat
    16201 gggcggaaag ccttttgcca gtcgggactc agcgcagaaa tcacatttat ctgccacttt
    16261 agtgacaggg ttaaggtagc gaacctggta cggacaagcg ccaatgcaat aactgcagcc
    16321 gatgcactgc gatttttcta cccgcacgat cccctgctca tcacgccacg atgcccccgt
    16381 cgggcaaacg tcgatgcacg gagcatcttc gcagtgctga catgactggc gaaaaaagtg
    16441 atactgcgtt tcgttgtcgt tatcggtgac tggaatgtgt gctatcgata aacggcttcc
    16501 ctgagcgggg acgtggttag ttttacggca tgcgcgggcg caaatattac agccattgca
    16561 ccgtgactcg tcatgaatca tggcataccg aacttccttt tcttgcctcg tgttcgctaa
    16621 cagagaagac gcagaaccag taaaaaagat tactgttccc atccccagaa caaatttgcg
    16681 tcgagtgaag gacatctgat tatcccctaa tgcagtggct gcaactgtcc accctatcca
    16741 tgacatctcc ctgaaatttc aggggttctg aaactgctct acctcgaacc attcgcataa
    16801 gccataagcc ttgccatagg tcataaatcg ctcactaaac aagtacaact ccgccgtcga
    16861 tgactccacc tgccgtatat cggcatattc aggtgcaaca tccatcgcgg cgatcgcggc
    16921 ttcaatctgc gcttcctgga agtaatatgg cgcttgcatc agcatggcga ctttgtaagg
    16981 acgaggatat gtctggcact caaaacgaac ggcgtgtgca atggcgcgac aaatgtcctg
    17041 ctccacaact tgcaaagaca tcgccgcgta gttttcactc atggcctgcg ttgagtaata
    17101 gtaatcatcc tggcttcccg tcatacaagc gatatcagcg tagtctccgt tctgcttaat
    17161 gctttccagc aaaactgaca gctcctcttc tgcaaccgaa tagggtggcg agagaaacac
    17221 ggcgcgcgcc accagctgcc cagccgcaga atgctggcga atgaactctg ccaggatttc
    17281 agccggttct ggttcggtta ccgtatcaac ggggtgacgc atcccctgta accattgccg
    17341 cttcgcctcg tcaacttcgc tgactttcgc taacggcaat tcatcccgat ggttcatctc
    17401 acccattcct tacacaggca gtagattgtg tgctgccaga tcggcggcaa tatcttccag
    17461 ccccagacgc tgcaatgttt cgcgggtggg actaccaagc tgtgggtccc agcccatttc
    17521 tttgtagaac atcgtgagcg aagcatgcat atcgtcacga tccattttgt cagtaccttc
    17581 agtaaagacc gggatctgcg gatccttgtc gaatacccag gaacagataa gatcgtgttc
    17641 attacgcata tctttggttt gcataagttt taccgtgtag gcacgatgca acgtaaagat
    17701 acgctctgca gctaaatcta atttttcctg agtcatctct tcgccggtga tcgctttgaa
    17761 gaatttggct tcaagcgcca gatcgccccg gtaattacgg cttttcagcg gcgaaacggt
    17821 cattggccag acccagttac acagggtgac ggcgttatgc aaacagaccc gcaacagcga
    17881 ccacttagca tatttaattt ttgcgtcatt gattggcgtg tagtttttgg tttcatcgta
    17941 ggcatcttca gaaccaaaaa gctctttcgc cacttcacgt tgcagtttca atggcaagcc
    18001 ggaaccaata aagttgatat gggtatgtgt catgcagtca cggttgaaca tacagttaac
    18061 aatggaaccg acctgcgctg acgcttcatt ggcatggtga accggatagc caaacggcga
    18121 ccagagttta tttttcgcgt agccccagta ctcttcaccc aaattccagc gttctgcgat
    18181 ggcatatgaa ccatcagcca ggtgactcag ctcacccaca cgatgcgcca gacggtagta
    18241 aaaatcttta atgaaattaa cgtcacccgc ttccagttga tcccagtgaa tttccgcata
    18301 ctcttcagca ggcagaacac acttgaacac ccctttgctg taacaataag taaagtcgcg
    18361 atgcaactgc ccgtagttac accataggcc gtagtcatcg aacaaattca gaccaaccaa
    18421 gttaccaatc acacggccat cgtctttatc ttcaaaatct ttcggaccgt tcgggaagat
    18481 ggtggtatgg acaaagttgg ctacacaagt gttaccacct gtgctgggca cgccaaactc
    18541 tttcacccga ggaatattca tttgggtcat acaacggatc gggcaagagt ggcagccact
    18601 catttttact gtgtatttct ctgccgccgg acctaagtca aaaacggatt tataggtacg
    18661 aaagccgacc gtgttctgat tgcctggcgg aatttccccc gtttcaatcg gaccaccttc
    18721 agccgcgccc caaaacagcc ctttacgtgc tgtccaacgt gacttgggat ctgaatactc
    18781 tgcccacgat tgcggcgtac ttggcacgac atggttgtta ttcgcaccaa taagttcagt
    18841 catcatgtaa tcgttgagac gcttcatctc ctgacgatcg gcaatgttga cccctttcgt
    18901 cccttcaacc gcaatcgctt tcaggttttt cgaacccata attgcgccag ttcccgcacc
    18961 gccgctgtgg ttacggctat tcaacatgcc agagagagga acaaggtttt ccccagcctg
    19021 gccaatagcc gccacacagg tttccggact ggtcaatcga caaatttctt ccgtcgttgc
    19081 gcgcgtccct tttccccata agaaatcggc tttttccagg ctaactttgt catctttaat
    19141 cttcagccat accggtgatt tcgccttccc ttcgataata atgacgtcgt atccagcgaa
    19201 tttcatttgc gctgcaaaaa agccacccat atgggcatcg acaactaaat ttcctttggt
    19261 aaaagtagaa agtgaggtga tatttacgcg agaactacag ggggcaccag atccagttaa
    19321 tgggccggta gcaaagacta atttattcgc ttcatcgaaa ggtttcgtgc ctggcggtac
    19381 ttcgtcatac ataattttgt agccgaagcc catgccaccg acaaaacttt taaacttact
    19441 ggaatcttcg agggtaatat ttcctgtcgt gagattgact cttaatatat tacctgtcca
    19501 accgttagcc atgatttttt cctttgcaag attctcacag taatatcttt ccactcgata
    19561 atttttaacg cccctgttgg gcaggcgttt gcacattcac cgcataacac acatttcgag
    19621 gattttttac tttcggtatt tacggtggcc atcatccacg ggcatgccgt agtacaggcg
    19681 ctacagccaa tacagcgttt atgatcgacg gtaatacagc cttctttctg ctgccaggta
    19741 atcgcaccaa tcgggcagac gttcatgcat tgcggctctt tgcattgacg gcaggtgtcc
    19801 gcggtatagt tgagatcgcc atacaggccg ccgccagagc caaccccgtt gtcgccaaag
    19861 aaataattgc gatggatttt gatacgggag aagaatgtcc ctactgagcc atcgttgaag
    19921 ttggtacaag agatttcaca gcggtggcaa cccgtgcatc gcgctcgctg ggtcaccagc
    19981 acccctttgg gtgtatttat caaccctact gtgccgctat caatatcttc ctgtttgcaa
    20041 cccaaaagtg acagtaacgc aggggcaatt gttagaccag caaggccttt tcctgatata
    20101 cgcaagaatt ctaatcgcgt taagccaata tctaatagtg gacgatcaac cgggttcatt
    20161 tatttcgcat cctcttcgca aacacagtgc tgacaattca gcagcctgat attaagcatt
    20221 caattaatac gctgctgact ctgtccccaa caccagatat tttccctaac ccgatagtgt
    20281 atgagaaaag atttaacgcc gataaactaa tcctttatgg ttaggagaaa aaataatgtg
    20341 attattctga gcccttaaca ttgatcgtta tcaattaaaa ttacaaagca agaaattata
    20401 agtga
//
LOCUS       DADMJE010000066        20113 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.067, whole genome shotgun sequence.
ACCESSION   DADMJE010000066 DADMJE010000000
VERSION     DADMJE010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 20113)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20113)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20113
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.067"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1985
                     /locus_tag="JN001_002140"
     CDS             <1..1985
                     /locus_tag="JN001_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="catecholate siderophore receptor Fiu"
                     /protein_id="HAY9053367.1"
                     /translation="VGAFLAGENGNSTTGDAIYMRGADTSNSIYIDGIRDIGSVSRDT
                     FNTEQVEVIKGPSGTDYGHSAPTGSINMISKQPRNDSGIDASASIGSAWFRRGTLDVN
                     QVIGDTTAVRLNVMGEKTHDAGRDKVKNERYGVAPSVAFGLGTANRLYLNYLHVTQHN
                     TPDGGIPTIGLPGYSAPSAGTAALNHSGKVDTHNFYGTDSDYDDSTTDTATMRFEHDI
                     NDNTTIRNTTRWSRVKQDYLMTAIMGGASNITQPTSDVNSWTWSRTANTKDVSNKILT
                     NQTNLTSTFYTSSIGHDVSTGVEFTRETQTNYGVNPVTLPAVNIYHPDSSIHPGGLTR
                     NGANANGQTDTFAIYAFDTLQITRDSELNGGIRLDNYHTEYDSATACGGSGRGAITCP
                     AGVAKGSPVTTVDTAKSGNLVNWKAGALYHLTENGNVYINYAVSQQPPGGNNFALAQS
                     GSGNSANRTDFKPQKANTSEIGTKWQVLDKRLLLTAALFRTDIENEVEQNDDGTYSQY
                     GKKRVEGYEISVAGNITPAWQVIGGYTQQKATIKNGKDVAQDGSSSLPYTPEHAFTLW
                     SQYQATDDISVGAGARYIGSMHKGSDGAVGTPAFTEGYWVADAKLGYRVNRNLDFQLN
                     VYNLFDTDYVASINKSGYRYHPGKPRTFLLTANMHF"
     gene            1991..2704
                     /gene="ybiX"
                     /locus_tag="JN001_002141"
     CDS             1991..2704
                     /gene="ybiX"
                     /locus_tag="JN001_002141"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706682.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PKHD-type hydroxylase YbiX"
                     /protein_id="HAY9053368.1"
                     /translation="MWGAGPTFWRNCMMYHIPGVLSPQDVARFREQLEQAEWVDGRVT
                     TGAQGAQVKNNQQVDTRSTLYAALQNEVLNAVNQHALFFAAALPRTLSTPLFNRYQNN
                     ETYGFHVDGAVRSHPQNGWMRTDLSATLFLSDPQSYDGGELVVNDTFGQHRVKLPAGD
                     LVLYPSSSLHCVTPVTRGVRVASFMWIQSMIRDDKKRAMLFELDKNIQSLKSRYGENE
                     EILSLLNLYHNLLREWSEI"
     gene            2778..3044
                     /gene="ybiI"
                     /locus_tag="JN001_002142"
     CDS             2778..3044
                     /gene="ybiI"
                     /locus_tag="JN001_002142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-type zinc finger protein YbiI"
                     /protein_id="HAY9053369.1"
                     /translation="MASGWANDDAVNEQINSTIEDAIARARGEIPRGESLYECEECGA
                     PIPQARREAIPGVRLCIHCQQEKDLQKPAYTGYNRRGSKDSQLR"
     gene            3309..3569
                     /locus_tag="JN001_002143"
     CDS             3309..3569
                     /locus_tag="JN001_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY9053370.1"
                     /translation="MKTINTVVAAMALSTLSFGVFAAEPVTASQAQNMNKIGVVSADG
                     ASTLDALEAKLTEKAAAAGASGYSITSATNNNKLSGTAVIYK"
     gene            complement(3797..4882)
                     /locus_tag="JN001_002144"
     CDS             complement(3797..4882)
                     /locus_tag="JN001_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate/lactate/ureidoglycolate dehydrogenase"
                     /protein_id="HAY9053371.1"
                     /translation="MESGHRFDAQTLHSFIQAVFRQMGSEEQEAKLVADHLIAANLAG
                     HDSHGIGMIPSYVRSWSQGHLQINHHAKIVKEAGAAVTLDGDRAFGQVAAHEAMALGI
                     EKAHQHGIAAVALHNSHHIGRIGYWAEQCAAAGFVSIHFVSVVGIPMVAPFHGRDSRF
                     GTNPFCVVFPRKDNFPLLLDYATSAIAFGKTRVAWHKGVPVPPGCLIDVNGVPTTNPA
                     VMQESPLGSLLTFAEHKGYALAAMCEILGGALSGGKTTHQETLQTSPDAILNCMTTII
                     INPELFGAPDCSAQTEAFAEWVKASPHDDDKPILLPGEWEVNTRRERQEQGIPLDAGS
                     WQAICDAARQIGMSEETLQAFCQQLAS"
     gene            complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JN001_002145"
     CDS             complement(5023..5985)
                     /gene="ybiB"
                     /locus_tag="JN001_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein YbiB"
                     /protein_id="HAY9053372.1"
                     /translation="MDYRKIIKEIGRGKNHARDLDRDTARGLYAHMLNGEVPDLELGG
                     VLIALRIKGEGEAEMLGFYEAMQNHTIKLTPPAGKPMPIVIPSYNGARKQANLTPLLA
                     ILLHKLGFPVVVHGVSEDPTRVLTETIFELMGITPTLHGGQAQAKLDEHQPVFMPVGA
                     FCPPLEKQLAMRWRMGVRNSAHTLAKLATPFAEGEALRLSSVSHPEYIGRVAKFFSDI
                     GGRALLMHGTEGEVYANPQRCPQINLIDREGMRVLYEKQDTAGSELLPQAKDPETTAQ
                     WIERCLAGSEPIPESLKIQMACCLEATGEAATISDGLARVNQAF"
     gene            complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JN001_002146"
     CDS             complement(6013..8163)
                     /gene="dinG"
                     /locus_tag="JN001_002146"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HAY9053373.1"
                     /translation="MALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMIADVAKTLAG
                     EEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKK
                     IIPDLKFTAAFGRGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLK
                     GDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCYYYRECPFFVARREIQEAE
                     VVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQL
                     DLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEH
                     RFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKTGRHDIVRLHRLILQMNRA
                     LGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHCVGIRVSDQLERLLWR
                     SIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRFE
                     PSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGD
                     QPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDLLSQVHIHKIAFPPIDSPVVI
                     TEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLLTKNYGKR
                     LLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR"
     gene            8283..8765
                     /gene="ybiA"
                     /locus_tag="JN001_002147"
     CDS             8283..8765
                     /gene="ybiA"
                     /locus_tag="JN001_002147"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-glycosidase YbiA"
                     /protein_id="HAY9053374.1"
                     /translation="MPVRAQRIQHVMQDTIINFYSTSDDYGDFSNFAAWPIKVDGKTW
                     PTSEHYFQAQKFLDEKYREEIRRVSSPMVAARMGRNRSKPLRKNWESVKEQVMRKALR
                     AKFEQHAELRALLLATAPAKLVEHTENDAYWGDGGNGKGKNRLGYLLMELREQLAIEK
                     "
     gene            complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JN001_002148"
     CDS             complement(8997..10361)
                     /gene="rhlE"
                     /locus_tag="JN001_002148"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase RhlE"
                     /protein_id="HAY9053375.1"
                     /translation="MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMAS
                     AQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYL
                     NIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADR
                     MLDMGFIHDIRRVLTKLPAKRQNLLFSATFSDDIKALAEKLLHNPLEIEVARRNTASD
                     QVTQHVHFVDKKRKRELLSHMIGKGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIH
                     GNKSQGARTRALADFKSSDIRVLVATDIAARGLDIEELPHVVNYELPNVPEDYVHRIG
                     RTGRAAATGEALSLVCVDEHKLLRDIEKLLKKEIPRIAIPGYEPDPSIKAEPIQNGRQ
                     QRGGGGRGQGGGRGQQQPRRGEGGAKSASAKPAEKPSRRLGDAKPAGEQQRRRRPRKP
                     AAAQ"
     gene            10590..11261
                     /gene="cecR"
                     /locus_tag="JN001_002149"
     CDS             10590..11261
                     /gene="cecR"
                     /locus_tag="JN001_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415317.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CecR"
                     /protein_id="HAY9053376.1"
                     /translation="MNNPAMTIKGEQAKKQLIAAALAQFGEYGMNTTTREIAAQAGQN
                     IAAITYYFGSKEDLYLACAQWIADFIGEQFRPHAEEAERLFAQPQPDRAAIRELILRA
                     CRNMIKLLTQDDTVNLSKFISREQLSPTAAYHLVHEQVISPLHSHLTRLIAAWTGCDA
                     NDTRMILHTHALIGEILAFRLGKETILLRTGWTAFDEEKTELINQTVTCHIDLILQGL
                     SQRSL"
     gene            11261..12259
                     /gene="hlyD"
                     /locus_tag="JN001_002150"
     CDS             11261..12259
                     /gene="hlyD"
                     /locus_tag="JN001_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="secretion protein HlyD"
                     /protein_id="HAY9053377.1"
                     /translation="MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLKLYGNVDIRT
                     VNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQVKAGVSVAQAQYDLML
                     AGYRDEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQA
                     TLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTR
                     AVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQ
                     IGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGNEAGHE"
     gene            12252..13988
                     /locus_tag="JN001_002151"
     CDS             12252..13988
                     /locus_tag="JN001_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9053378.1"
                     /translation="MNDAVITLNGLEKRFPGMGKPAVAPLDCTIHAGYVTGLVGPDGA
                     GKTTLMRMLAGLLKPDSGNATMIGFDPIKNDGALHAVLGYMPQKFGLYEDLTVMENLN
                     LYADLRSVTGEARKQTFARLLEFTSLGPFTGRLAGKLSGGMKQKLGLACTLVGEPKVL
                     LLDEPGVGVDPISRRELWQMVHELASEGMLILWSTSYLDEAEQCRDVLLMNEGELLYQ
                     GEPKALTQTMAGRSFLMTSPHEGNRKLLQRALKLPQVSDGMIQGKSVRLILKKEATPD
                     DIRHADGMPEININETTPRFEDAFIDLLGGAGTSESPLGAILHTVEGTPGETVIEAKE
                     LTKKFGDFAATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSGQALVLGMD
                     LKESSGKARQHLGYMAQKFSLYGNLTVEQNLRFFSGVYGLRGRAQNEKISRMSEAFGL
                     KSIASHATDELPLGFKQRLALACSLMHEPDILFLDEPTSGVDPLTRREFWLHINSMVE
                     KGVTVMVTTHFMDEAEYCDRIGLVYRGKLIASGTPDDLKAQSANDEQPDPTMEQAFIQ
                     LIHDWDKEHSNE"
     gene            13981..15114
                     /locus_tag="JN001_002152"
     CDS             13981..15114
                     /locus_tag="JN001_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9053379.1"
                     /translation="MSNPILSWRRVRALCVKETRQIVRDPSSWLIAVVIPLLLLFIFG
                     YGINLDSSKLRVGILLEQRSEAALDFTHTMTGSPYIDATISDNRQELIAKMQAGKIRG
                     LVVIPVDFAEQMERANATAPIQVITDGSEPNTANFVQGYVEGIWQIWQMQRAEDNGQT
                     FEPLIDVQTRYWFNPAAISQHFIIPGAVTIIMTVIGAILTSLVVAREWERGTMEALLS
                     TEITRTELLLCKLIPYYFLGMLAMLLCMLVSVFILGVPYRGSLLILFFISSLFLLSTL
                     GMGLLISTITRNQFNAAQVALNAAFLPSIMLSGFIFQIDSMPAVIRAVTYIIPARYFV
                     STLQSLFLAGNIPVVLVVNVLFLIASAVMFIGLTWLKTKRRLD"
     gene            15125..16231
                     /locus_tag="JN001_002153"
     CDS             15125..16231
                     /locus_tag="JN001_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9053380.1"
                     /translation="MFHRLWTLIRKELQSLLREPQTRAILILPVLIQVILFPFAATLE
                     VTNATIAIYDEDNGEHSVELTQRFTRASAFTHVLLLKSPQEIRPTIDTQKALLLVRFP
                     ADFSRKLDTFQTAPLQLILDGRNSNSAQIATNYLQQIVKNYQQELLEGKPKPNNSELV
                     VRNWYNPNLDYKWFVVPSLIAMITTIGVMIVTSLSVAREREQGTLDQLLVSPLTTWQI
                     FIGKAVPALIVATFQATIVLAIGIWAYQIPFAGSLALFYFTMVIYGLSLVGFGLLISS
                     LCSTQQQAFIGVFVFMMPAILLSGYVSPVENMPVWLQNLTWINPIRHFTDITKQIYLK
                     DASLDIVWNSLWPLLVITATTGSAAYAMFRRKVM"
     gene            complement(16193..16603)
                     /locus_tag="JN001_002154"
     CDS             complement(16193..16603)
                     /locus_tag="JN001_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053381.1"
                     /translation="MKWQQRVRVATGLSCWQIMLHLLVVALLVVGWMSKTLVHVGVGL
                     CALYCVTVVMMLVFQRHPEQRWREVADVLEELTTTWYFGAALIVLWLLSRVLENNFLL
                     AIAGLAILAGPAVVSLLAKDKKLHHLTSKHRVRR"
     gene            16736..17487
                     /locus_tag="JN001_002155"
                     /pseudo
     CDS             16736..17487
                     /locus_tag="JN001_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308895.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
     gene            17484..18725
                     /gene="clsB"
                     /locus_tag="JN001_002156"
     CDS             17484..18725
                     /gene="clsB"
                     /locus_tag="JN001_002156"
                     /EC_number="2.7.8.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase ClsB"
                     /protein_id="HAY9053382.1"
                     /translation="MKCSWREGNKIQLLENGEQYYPAVFKAIGEAQERIILETFIWFE
                     DNVGKQLHAALLAAAQRGVKAEVLLDGYGSPDLSDEFVNKLTAAGVVFRYYDPRPRLF
                     GMRTNVFRRMHRKIVVIDARIAFIGGLNYSAEHMSSYGPEAKQDYAVRLEGPIVEDIL
                     QFELENLPGQSAARRWWRRHHKAEENRQPGEAQVLLVWRDNEEHRDDIERHYLKMLTQ
                     ARREVIIANAYFFPGYRFLHALRKAARRGVRIKLIIQGEPDMPIVRVGARLLYNYLVK
                     GGVQVFEYRRRPLHGKVALMDDHWATVGSSNLDPLSLSLNLEANVIIHDRHFNQTLRD
                     NLNGIIAADCQQVDETMLPKRTWWNLTKSVLAFHFLRHFPALVGWHPAHTPRLTQVDP
                     PAQPTMETQDRVETENTGVKP"
     gene            18791..19681
                     /locus_tag="JN001_002157"
     CDS             18791..19681
                     /locus_tag="JN001_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000636449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HAY9053383.1"
                     /translation="MIVLLVVYAKKVDWEEVWKVIRDYNRVALLSAVGLVVVSYLIYG
                     CYDLLARFYCGHKLAKRQVMLVSFICYAFNLTLSTWVGGIGMRYRLYSRLGLPGSTIT
                     RIFSLSITTNWLGYILLAGIIFTAGVVELPDHWYVAQTTLRILGIGLLMIIAVYLWFC
                     AFAKHRHMTIKGQKLVLPSWKFALTQMLISSVNWMVMGAIIWLLLGQSVNYFFVLGVL
                     LVSSIAGVIVHIPAGIGVLEAVFIALLAGEHTSKGSIIAALLAYRVLYYFIPLLLALI
                     CYLLLESQAKKLRAKNEAAM"
     gene            complement(19717..>20113)
                     /locus_tag="JN001_002158"
     CDS             complement(19717..>20113)
                     /locus_tag="JN001_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HAY9053384.1"
                     /translation="IIVFSTAGAMFLISMLAGLLFNVDPGSHRFIIMMTLTGLALVII
                     VNAALMSERPIWVISCLVIVLWPGIISHGRNKLLELAGKCHSEELWSPVRCAFTGALT
                     LYYYFIGFFGILAAIAITLVWQRHTRFFH"
BASE COUNT         4724 a         5446 c         5301 g         4642 t
ORIGIN      
        1 gcgtgggtgc gtttttggcg ggtgagaacg gtaactccac cactggcgac gccatttata
       61 tgcgtggtgc cgatacctct aacagtattt atattgatgg cattcgcgat atcggcagcg
      121 tctcgcgcga caccttcaat accgagcagg tcgaagtgat taaagggccg tccggcaccg
      181 actacgggca cagcgcaccg acgggctcga tcaatatgat cagcaaacag ccgcgcaatg
      241 attccggcat tgacgcctcc gccagtattg gcagcgcctg gttccgccgc ggcacgctgg
      301 acgtcaatca ggtcattggt gataccaccg cggtgcgcct gaatgtaatg ggcgaaaaaa
      361 cgcacgatgc cggacgcgac aaagtcaaaa atgagcgtta cggcgtcgcc ccttctgtcg
      421 cttttggcct tggtacagcg aatcgtttgt atcttaatta tctgcatgtc acccagcaca
      481 acacgccaga cggcggcatt ccgaccatcg gtttgccggg ctattctgcc ccatctgcgg
      541 gaacggcggc cctgaatcat tccggaaaag ttgatactca taacttttac ggcacggatt
      601 ccgattacga cgattcgacc accgacaccg ccaccatgcg ttttgagcac gacatcaacg
      661 ataacaccac cattcgcaat actacccgtt ggtcgcgcgt aaagcaggat tacctgatga
      721 cggcgattat gggcggggcg tcgaatatta ctcagcccac cagcgatgtg aatagctgga
      781 cctggtcacg cacggcgaat accaaagatg tgagtaataa aattctcacc aaccagacca
      841 acctgacctc gacgttctat accagttcta tcggtcatga tgtcagtacc ggcgtggaat
      901 ttacccgtga aacgcagact aactacggcg ttaatccggt gacgttaccc gcggtaaata
      961 tttatcatcc tgacagcagc attcatcccg gcggcctgac gcgcaacggc gcaaacgcca
     1021 atggtcagac ggataccttc gcaatttacg cctttgatac gctgcaaatc acccgtgatt
     1081 ctgagctgaa cggcgggatc cgtctggata attatcatac tgaatatgac agtgccaccg
     1141 cctgcggcgg cagcggacgc ggtgccatca cctgcccagc tggtgtggca aaaggttctc
     1201 cggtcaccac cgtcgacacc gccaagtcgg gcaatctggt gaactggaaa gccggggcgc
     1261 tgtatcacct gacggaaaac ggtaatgtct atattaacta tgccgtttcc cagcagcctc
     1321 cgggcggcaa caacttcgcc cttgcgcagt ctggcagcgg taacagtgcc aaccgcacag
     1381 attttaaacc gcaaaaagcc aacaccagcg agattggcac caaatggcag gttctggata
     1441 aacgcctgtt gctcaccgcc gcactgttcc gtactgatat cgaaaatgaa gttgagcaaa
     1501 atgatgacgg aacttactcg caatacggta agaaacgtgt cgaaggctat gagatatccg
     1561 tggccgggaa tatcactccc gcgtggcagg tgattggcgg ctatacccag caaaaagcaa
     1621 ccatcaaaaa cggcaaagat gttgcccagg atggttcctc atcgctgccg tataccccgg
     1681 agcacgcctt caccttatgg agccagtatc aggcaaccga tgatatctct gttggcgcgg
     1741 gcgcacgcta tatcggcagt atgcataaag gttcagacgg cgcggtggga acgccagcgt
     1801 ttaccgaagg ttactgggtc gccgatgcca aactggggta tcgggttaat cgcaatctcg
     1861 acttccagct aaacgtttac aacctgtttg ataccgatta cgtcgcctca atcaacaaga
     1921 gcggctaccg ttatcacccg ggcaagccaa gaaccttctt gctcacagcc aatatgcatt
     1981 tctgattcag atgtggggcg caggccccac tttttggaga aattgtatga tgtaccacat
     2041 tcccggcgtg ttatcgccac aggacgtcgc tcgttttcgc gaacaactgg aacaagccga
     2101 atgggtggat ggacgcgtca ccaccggcgc acaaggtgcg caagttaaga acaatcaaca
     2161 ggtagacacc cgcagcacgt tatacgccgc cctgcaaaat gaggtgctga acgcggttaa
     2221 ccaacatgct ttattctttg ccgcggcctt gccgcgtacc ctttccacgc cgctgtttaa
     2281 tcgctatcag aacaatgaaa cctatggttt tcatgtggat ggcgcagtac gcagccatcc
     2341 acaaaacggc tggatgcgca ctgacctttc tgccacgctg tttttaagcg atccacaaag
     2401 ctacgacggc ggcgaactgg tcgttaatga caccttcgga caacatcggg taaaactccc
     2461 ggcaggtgat ctcgtgttgt atccctccag cagcctgcat tgcgtgacac ccgtaacccg
     2521 cggcgtacga gtggcatcat ttatgtggat ccagtcgatg atccgcgatg ataaaaagcg
     2581 cgccatgctg tttgaactag acaaaaatat tcagtcgctg aaaagccgct atggtgaaaa
     2641 tgaagagatc ctgtcgctgc tcaatcttta tcataatctg ctgcgggaat ggtcggagat
     2701 ctgacgcttg aactgcccag gttcgtccct atattagcta cacttaactg tacaagcatt
     2761 gatatgggga ggacgatatg gcatccggtt gggctaacga tgacgccgtc aacgaacaga
     2821 tcaacagtac aattgaagat gcgattgccc gcgctcgggg tgaaattccg cgtggcgaaa
     2881 gcctgtatga atgtgaagag tgcggtgccc ccatcccgca agctcgtcgg gaagccattc
     2941 ctggcgtgcg cttatgtatt cattgtcagc aggagaaaga tttacaaaaa ccagcgtata
     3001 caggatataa tcgcagaggt tcgaaagaca gccagttacg ttaactacaa ctggcgagat
     3061 gcatagcgag tataatttgt attttgcgtg gcattccgtg cctttaacgc tgctgtgact
     3121 gccacgcggc ataaaacaag tccataagta caacaaataa atggtttatc agtatgttag
     3181 atgtcaatca atttatttga acaaggcggt caattctctt cgattttatc tctcgaaaaa
     3241 aaacgtgata ctcatcacat cgacgaaaca acgtcactta tacaaaaatc acctgcgaga
     3301 gattaattat gaaaactatc aatactgttg ttgctgctat ggctctttca actctatcat
     3361 ttggcgtgtt cgcggcggaa ccggtaacgg catcccaggc acagaacatg aataaaatcg
     3421 gcgtggtttc tgccgatggc gcatccaccc tcgatgccct ggaagcgaaa ctgactgaga
     3481 aagccgcggc agccggtgcc agtggataca gcatcacttc tgccaccaac aacaataaat
     3541 taagcggtac tgcggtaatt tataagtaat tcgtaggacg gataaggcgt ttacgccgca
     3601 tccggcaaca gatgcctgat gcgacgctac cgcgtcttat caggcctaca aaatccgaac
     3661 cgttggacgg atcaggcggt tacgctacgt ccagcacaag tatttccctg tctgtttgcc
     3721 gacagacgca tatgctctaa ccctcattga tcctatatta cccttgtttg cccgtccgtt
     3781 actggacggg ctttttttag ctggctaact gctgacagaa agcctgcaac gtctcttccg
     3841 acataccaat ctgccgcgcc gcatcacaaa tggcctgcca gcttcccgca tccaatggaa
     3901 tcccctgctc ctgccgttcg cgacgcgtgt tcacttccca ctcgcccggt agcaaaatcg
     3961 gcttatcgtc atcatgcggc gaggctttca cccactcggc aaaggcttca gtctgcgcgc
     4021 tacaatccgg cgcgccgaac agttccgggt tgatgatgat agtggtcatg cagttaagaa
     4081 tggcatcggg actggtttgt aacgtttcct gatgcgtcgt tttaccgcca gaaagcgccc
     4141 cgccaagaat ttcacacatc gctgcaaggg cgtagccttt atgttcggca aaggtcaaca
     4201 gcgaccccaa cggcgactcc tgcattaccg ccggattggt cgtcggcacg ccgttaacgt
     4261 caatcaggca acctggcggc acggggacgc ctttatgcca ggcgacgcga gttttaccaa
     4321 atgcgatggc gctggtggcg taatcaagca acagcgggaa attatcttta cgagggaaaa
     4381 ccacacagaa cggattggtg ccaaagcggc tgtcgcgacc gtggaacggt gcgaccattg
     4441 gaataccgac cacgctaaca aagtggatag agacaaaccc cgccgctgca cactgctccg
     4501 cccagtaacc gatacggccg atatgatgcg agttatgtag cgccacggca gcaataccgt
     4561 gctgatgcgc tttctcaatc cccagcgcca tcgcttcgtg tgccgcgacc tgaccgaatg
     4621 cgcgatcgcc atcgagcgtg actgccgccc ccgcctcttt aacgattttg gcatgatggt
     4681 taatttgcag atgcccctga ctccaggaac gcacatagct tgggatcatg ccaataccat
     4741 gagaatcatg ccctgccagg tttgccgcga ttaaatgatc ggccactaat ttcgcttctt
     4801 gttcctcgct acccatctga cgaaatacag cctgaataaa actgtgcagc gtctgagcat
     4861 caaagcgatg accactttcc atggttaact cctgtttatg ttatgtgttt gttgtttttt
     4921 tatgctgcac gccgggcgcg ggaaggtcaa taaagatgca ggaatttcat attgcggtgg
     4981 ggtaaaagcc ggatgacatg gctcatccgg ctgagaaaag aattaaaatg cctgattaac
     5041 gcgcgccagg ccgtcgctga tagttgccgc ttcacccgta gcctccaggc agcaagccat
     5101 ctggattttc agcgattcgg gaatcggttc gctgccagca aggcaacgct caatccactg
     5161 cgccgtggtt tctgggtctt ttgcttgtgg cagtaactcg ctaccagcag tgtcctgttt
     5221 ttcatacagc acccgcatcc cttcacggtc aatgagattg atctgcgggc agcgctgcgg
     5281 attagcatac acttcgcctt cagtaccatg cattagtagc gcccgcccgc cgatatcgct
     5341 aaagaacttc gcgactcgcc cgatgtattc cggatgcgaa acgctggaaa gacgcagcgc
     5401 ctcaccttcg gcaaatggcg tcgccagttt cgccagggta tgtgcactgt tacgcacgcc
     5461 catccgccag cgcatcgcca gttgtttttc cagcggcggg caaaacgcgc cgacaggcat
     5521 aaacaccggt tgatgttcgt cgagcttcgc ctgcgcctgc ccgccgtgca acgttggtgt
     5581 aatacccatc agttcgaaaa tggtttctgt cagcacgcga gttggatctt cgctaacccc
     5641 gtgaaccacc acaggaaaac cgagtttgtg caggagaata gccaacaacg gcgtcaggtt
     5701 ggcctgttta cgcgcgccgt tgtaactggg gatgacaatc ggcatcggct tgcctgcagg
     5761 cggcgtcagc ttgatggtgt gattttgcat ggcttcgtaa aagccgagca tctctgcttc
     5821 cccttcccct ttgatacgta gcgcaatcaa tacgccgccc aactcaaggt cagggacttc
     5881 accattgagc atatgggcat acagaccgcg cgcagtatcc cggtctaaat cgcgcgcgtg
     5941 gtttttcccg cgcccgatct ctttaatgat tttgcgatag tccatttacg actccttacc
     6001 tgactcacat cattaacgcc gccgacggcg tggggatttc gttttttctt tctttttaac
     6061 tataccttca gggacttccg gttgctctat cggaaatacc ggtaatgcat ccagtagtcg
     6121 cttgccataa tttttggtca gcaagcgttt gtcgtagata accacttcgc cccagcaacc
     6181 gtggcttcga atcagtcgcc caacctgctg aatcaggtta aacgaggcgc tcggcaggct
     6241 ttgcacctca aacggatagc ggttgaggct tttcagccat tccccttcgg tgatcaccac
     6301 cgggctgtcg atgggcggaa aagcgatttt gtggatatgc acctggctga gcagatcacc
     6361 tttcaaatca agcccttcgg caaatgactg taagcccacc agcacactac gctcaccgtt
     6421 ggcaacgcgt ttgcggtgca gttcaactaa gcgataacgc ggctgatcgc cctgcaccag
     6481 cagcatcagg cgtaaatccg tcacatagtc gagaaagcgc tgcatcgccc gtccgctggc
     6541 aaacagtacc aacataccga gatgtttttt gctctccacc tgctcacgga aaaaggccgc
     6601 catttcggca atatgctgct cttcgttgtc gatggaaggc tcaaagcgca tccggggaat
     6661 aacaattttg ccctgttcgc agtggttaaa gggggaatcc agcgccacaa aacggtcgcc
     6721 cgctttctct ttcagcccgc tcatctcctg caaacgcgaa aaactgttca gcgaacgcaa
     6781 ggttgcggag gtgacaataa tgtgcggaat actgcgccac agcagccttt ccagctgatc
     6841 gctgacacgt attcccacgc agtgaaacca gagatgcagc tgcccttcgc gctcttcccg
     6901 cgtcgcccat ttggtcaccg gcgcaccgga agattgcgcc agagacgcca gccgccagag
     6961 tttgctttgc gcctcgaaca tccccaacgc gcggttcatc tgcaaaatca accgatgcag
     7021 acgcacaata tcgtggcggc cggttttctc acttaaatcg ttaagaaata actccgccag
     7081 accacgcagc atctcggtga gttttgccag ccgctggcag atctccagca cttcatcagg
     7141 cagttcgccc atcgcaaaac ggtgctctgc ctcctgcccg gcaggcatgt agagattgag
     7201 aatgttgttt aacgaggcga taagctcata caactcttca caatgcgcat tcaaacgttc
     7261 agggatcgcc agcggtggga tggtcttcgg gcgaaactgc tccatgcagg tagcgaccag
     7321 tttcgtgaac aagtccagct gtagtcgata ccagggcgcg gtgatttcag cgctcatctc
     7381 cagcgcatcc cgggccacat ctggcaggtg atgaccttcg tccagcacca gcagcagatt
     7441 tttcgggtca ggcagtacgg cttcgctttc catcgccgcc atcaccagcg catggtttgc
     7501 caccaccact tccgcttcct gaatctcccg acgagcaaca aaaaacgggc attcacgata
     7561 gtagtaacag ttacggttaa ggcagctggc tttgtcggta ctcaaacgac gccagagatc
     7621 atcatctata gcgatatccg tatgatcgcg cagaccatcc catttataag tgtcgagatc
     7681 gcccttcagc ttcgcacaac gtttttgctc ttcctgatta tttggcgtca gttcgtcgtc
     7741 aagaaacgcc agcagatcct gttgcgtggg ttcagtgctg gcgagcgccg tcagattacg
     7801 cggacaaacg tagcgcccac gcccgaaagc ggcagtgaat ttaagatcgg gaatgatctt
     7861 tttcagcagc ggtaaatctt tgctgtaaat ctgatcctgc aacgccacgt tggcggtact
     7921 caccaccagc gttttttgct cttcgcgggc aatggcgatg ccggggatca aataggagag
     7981 cgttttccca acgccggtgg gggcttcaat cgccagatgc cgcccttctt ctccggccag
     8041 cgttttggcg acgtccgcaa tcatctgccg ctgcggcgca cggggaataa agtcggggat
     8101 ctgttcctga agcgccttat accaggcggc aatttgcgct ttaagcgcgg cggttaatgc
     8161 catgagaaaa cctgaaatac tgtataaaca gccaatattg tggcattttt cggttttcag
     8221 gggtaatggt ttttctgttt ctggaaagcg gctcgcaata accaccaaca taatgcggtt
     8281 taatgcccgt tcgagcacaa aggatccaac acgtcatgca agacaccatc ataaatttct
     8341 acagcaccag cgatgactac ggtgattttt ctaactttgc cgcctggccc atcaaggttg
     8401 acgggaaaac ctggcccacc tccgaacact attttcaggc acaaaaattc cttgatgaaa
     8461 aataccgcga agagatccgt cgggtttctt cccccatggt cgccgctcgc atggggcgta
     8521 atcgttccaa gccacttcgt aaaaactggg agtcggttaa agaacaggtg atgcgtaaag
     8581 cacttcgtgc taaattcgaa cagcatgcag aactgcgtgc gctcttgctg gcaaccgcgc
     8641 ccgcaaaact ggttgagcat acggaaaacg atgcttactg gggagacggt ggtaatggta
     8701 agggcaagaa tcgactgggc taccttttaa tggagttgcg cgaacaattg gctatagaga
     8761 agtaacgtct cggtggctta tgggcggtaa aacagataaa ttttttcccg tgttctcaaa
     8821 ttgctgacaa gtgcttgttg tgaaatgccg gatgcggcgt aaacgcctta tccggcctac
     8881 aaaagcatgc aaattcaata tattgcagag ttaacgtagg cctgataagc gtagcgcatc
     8941 aggcagtttt gcgtttgttc atcagcctga tgccgggcat agcccggcat aaaagattac
     9001 tgcgcagcgg caggtttacg cggacggcgg cgacgttgtt gttcgcctgc cggtttggca
     9061 tcgccgaggc ggcgagacgg tttttctgca ggtttcgcgc ttgcagattt tgcgccacct
     9121 tccccacggc gtggttgctg ttgaccgcga ccaccacctt gcccacgacc gccgccgcca
     9181 cgttgctggc gaccgttctg gatcggttcg gctttgattg acgggtccgg ctcatagccc
     9241 ggaatcgcaa tgcgcgggat ctcttttttc agcagttttt cgatatcacg cagcagtttg
     9301 tgttcatcaa cacacaccag cgacaacgct tcaccggtag cagccgcacg accggtacgc
     9361 ccgatacggt ggacataatc ttccggtacg tttggcagtt catagttgac gacgtgcggc
     9421 aactcttcga tatccagacc gcgcgcagcg atatcggtcg ccaccagtac gcgaatgtca
     9481 ctcgatttaa aatcagccag cgcacgggta cgcgcacctt gcgatttatt cccgtggatc
     9541 gccgcactac ggatgccatc tttattgagc tgctcagcca gatggttagc gccgtgtttg
     9601 gtacgggtaa acaccagcac ctgctgccag ttccctttac caatcatgtg cgacagcaat
     9661 tcgcgtttgc gtttcttatc gacaaagtga acgtgctggg tcacctgatc agacgcggta
     9721 ttgcggcgtg ccacttcgat ttccagcggg ttgtgcaaca gtttttccgc cagggcttta
     9781 atatcgtcag agaaggtcgc agagaacagc aggttctggc gtttcgctgg cagttttgtt
     9841 aacacgcgac ggatatcgtg gataaagccc atgtcgagca tgcggtcagc ttcatcgagg
     9901 acgaggattt caacctgatc cagcttcact gcattttgat gttccaggtc cagcaaacgt
     9961 cccggtgttg ccaccagaac atcaacgccg ccgcgcagct tcatcatttg cgggttaatg
    10021 ctgacaccgc caaacaccac cagcgaacga atgttcaaat atttgctgta atcacggacg
    10081 ttttcgccaa tctgcgcagc cagttcacgg gtcggggtaa gaatgagcgc acgtaccgga
    10141 cgacgccctt tggcgtgcgg ctggcgagtg atcaggtgtt gcaacagcgg cagcgtaaag
    10201 cccgctgttt taccggtacc ggtctgggcg ctagccatca ggtcgcggcc ttccagcacc
    10261 gcagggatcg cctgctgctg aataggggtg ggttcacggt aaccctgctc ggcaacggcg
    10321 cgcaggatat cagggcttaa acccaaagaa tcgaaagaca taactactcc gaaccgcccc
    10381 gaccgttacc ggtgtagttt tcagggagat actgaaaagg aaaatgacaa aaaccacaat
    10441 gtcatgaggg agcggagtgt agcagttttt gtgacgcagc gcataaatta tccctgtgac
    10501 tggcgttgct aaaattctta gccatactgg acaactcccc tatggagtca taatcttaat
    10561 caatcatttg attaagaatg gactgtgcga tgaataatcc tgccatgaca atcaagggtg
    10621 aacaggcgaa aaaacagctg attgctgccg cactggcgca gtttggtgaa tatggaatga
    10681 acaccaccac tcgcgagata gccgcccagg ccgggcagaa tatcgctgcc atcacctact
    10741 acttcggttc gaaagaagat ttgtacctcg cctgcgccca gtggattgcc gattttattg
    10801 gcgagcagtt ccgtccgcat gccgaggaag ccgaacgctt gttcgcgcaa ccacagcctg
    10861 atcgggctgc catccgtgaa ctgatccttc gcgcctgcag gaacatgatt aagctgctca
    10921 cccaggatga caccgtcaac ctcagcaagt ttatctcccg tgagcagctc tctcccacgg
    10981 cagcctacca cctggtgcac gaacaggtga ttagtccgct acacagccac ctgacacgcc
    11041 tgattgccgc ctggaccggc tgcgacgcca atgacacccg catgatcctt catacccatg
    11101 cgttgattgg tgagattctg gcgttccgtc ttggcaaaga aacaattctg ttacgtaccg
    11161 gctggaccgc gttcgatgaa gaaaagaccg aactgatcaa ccagacggtg acctgtcata
    11221 tcgacctgat tttgcaagga ttatcgcaaa ggagtttgta gtgatgaaaa aacctgtcgt
    11281 gatcggactg gcggtagtgg tacttgccgc cgtggttgcc ggaggctact ggtggtatca
    11341 aagccgccag gataacggcc tgaagctgta tggcaacgtg gatattcgta cggtgaatct
    11401 tagtttccgt gttggggggc gcgttgaatc gctggcggtg gacgaaggtg atgcgatcaa
    11461 agcgggccag gtgctgggcg aactggatca caagccgtat gagattgccc tgatgcaggt
    11521 gaaagcgggc gtctcggtgg cacaggcgca gtatgacctg atgcttgccg ggtatcgcga
    11581 tgaagaaatc gctcaggccg ccgcagcggt gaaacaggcg caagccgcct atgactatgc
    11641 gcagaacttc tataaccgcc agcaaggact gtggaaaagc cgcaccattt cggcaaatga
    11701 cctggaaaat gcccgctcct cgcgcgacca ggcacaggca acgctgaaat cagcacagga
    11761 taaattgcgt cagtaccgtt ccggtaaccg tgaacaggac atcgctcagg cgaaagccag
    11821 cctcgaacag gcgcaggcgc aactggcgca ggcggagctg aatttacagg actcaacgtt
    11881 gatagcaccg tctgatggca cactgttaac gcgcgcggtg gagccaggca cggttctcaa
    11941 tgaaggtggc acggtgttta ccgtttcact aacgcgtccg gtgtgggtgc gcgcttatgt
    12001 tgatgaacgg aatcttgacc aggcccagcc ggggcgcaaa gtgctgcttt ataccgatgg
    12061 tcgcccggac aagccgtatc acgggcagat tggtttcgtt tcgccgactg ctgaatttac
    12121 cccgaaaacc gtcgaaacac cggatctgcg taccgacctc gtctatcgcc tgcgtattgt
    12181 ggtgaccgac gccgatgatg cgttacgcca gggaatgccg gtgacggtgc aattcggtaa
    12241 cgaggcagga catgaatgat gccgttatca cgctgaacgg cctggaaaaa cgctttccgg
    12301 gcatgggcaa gcccgccgtc gcgccgctcg attgtaccat tcacgccggt tatgtgacgg
    12361 ggctggtggg gccggatggt gcaggtaaaa ccacgctaat gcggatgctg gcgggattac
    12421 tgaaacccga cagcggcaat gccacgatga ttggctttga tccaatcaaa aacgacggcg
    12481 cgctgcacgc cgtgctcggc tatatgccgc agaaatttgg tctgtatgaa gatctcacgg
    12541 tgatggagaa cctcaatctg tacgcggatt tgcgcagcgt caccggcgag gcacgtaagc
    12601 aaacttttgc tcgcctgctg gagtttacgt ctcttgggcc gtttaccgga cgcctggcgg
    12661 gcaagctctc cggtgggatg aaacaaaaac tcggtctggc ctgtaccctg gtgggcgaac
    12721 cgaaagtgtt gctgctcgat gaacccggcg tcggcgttga ccctatctca cggcgcgaac
    12781 tgtggcagat ggtgcatgag ctggcaagcg aagggatgtt aatcctctgg agtacctcgt
    12841 atctcgacga agccgagcag tgccgtgacg tgttactgat gaatgaaggc gagttgctgt
    12901 atcaggggga accaaaagcc ctgacacaaa ccatggccgg acgcagcttt ctgatgacca
    12961 gtccacacga gggcaaccgc aaactgttgc aacgcgcctt gaaactgcca caggtcagcg
    13021 acggcatgat tcaggggaaa tcggtacgtc tgatcctcaa aaaagaggcc acaccagacg
    13081 atattcgcca tgccgacggg atgccggaaa tcaacatcaa cgaaactacg ccgcgttttg
    13141 aagatgcatt tattgatttg ctgggtggtg ccggaacctc agaatcgccg ctgggtgcaa
    13201 tattgcatac ggtagaaggc acacccggcg agacggtgat cgaagcgaaa gaactgacca
    13261 agaaatttgg tgattttgcc gccaccgatc acgtcaactt tgccgttaaa cgtggggaga
    13321 tttttggttt gctggggcca aacggcgcgg gtaaatcgac cacctttaag atgatgtgcg
    13381 gtttgctggt gccgacttcc ggccaggcgc tggtgctggg gatggatctg aaagagagtt
    13441 ccggtaaagc gcgccagcat ctcggctata tggcgcaaaa attttcgctc tacggcaacc
    13501 tgacggtcga acagaattta cgctttttct ctggtgtgta tggcttacgc ggtcgggcgc
    13561 agaacgaaaa aatctcccgt atgagcgagg catttggcct gaaaagtatc gcctcccacg
    13621 cgaccgatga actgccatta ggttttaaac agcggctggc gctggcctgt tcgctgatgc
    13681 atgaaccgga cattctgttt ctcgacgaac caacgtccgg cgttgatccc ctcacccgcc
    13741 gcgaattttg gctgcatatc aacagcatgg tagagaaagg cgtcacggtg atggtcacca
    13801 ctcactttat ggatgaagca gaatattgcg accgcatcgg cctggtgtac cgtgggaaat
    13861 taattgccag cggcacgccg gatgatttga aagcgcagtc ggccaacgac gagcaacccg
    13921 atcccaccat ggagcaagcc tttattcagt tgatccacga ctgggataag gagcatagca
    13981 atgagtaacc cgatcctgtc ctggcgtcgc gtacgggcgc tgtgcgttaa agagacgcgg
    14041 cagatcgttc gcgatccgag tagctggctg attgcggtag tgatcccgct gctactgctg
    14101 tttatttttg gttacggcat taacctcgac tccagcaagc tgcgggtcgg gattttactg
    14161 gaacagcgta gcgaagcggc gctggatttc acccacacca tgaccggttc gccctacatc
    14221 gacgccacca tcagcgataa ccgtcaggaa ctgatcgcca aaatgcaggc ggggaaaatt
    14281 cgcggtctgg tggttattcc ggtggatttt gcggaacaga tggagcgcgc caacgccacc
    14341 gcaccgattc aggtgatcac cgacggcagt gagccgaata ccgctaactt tgtacagggg
    14401 tatgtcgaag ggatctggca gatctggcaa atgcagcgag cggaggacaa cgggcagact
    14461 tttgaaccgc ttattgatgt acaaacccgc tactggttta acccggcggc gattagccag
    14521 cacttcatta tccccggtgc ggtgaccatt atcatgacgg tcatcggcgc gattctcacc
    14581 tcgctggtgg tggcgcgaga atgggaacgc ggcaccatgg aggctctgct ctctacggag
    14641 attacccgca cggaactgct gctgtgtaag ctgatccctt attactttct cgggatgctg
    14701 gcgatgttgc tgtgtatgct ggtgtcagtg tttattctcg gcgtgccgta tcgcgggtcg
    14761 ctgctgattc tgttttttat ctccagcctg tttttactca gtaccctagg gatggggctg
    14821 ctgatttcca cgattacccg caaccagttc aatgccgctc aggtcgccct gaacgccgct
    14881 tttctgccgt cgattatgct ttccggcttt atttttcaga tcgacagtat gcccgcggtg
    14941 atccgcgcgg tgacgtacat tattcccgct cgttatttcg tcagcaccct gcaaagcctg
    15001 ttcctcgccg ggaatattcc agtggtgctg gtggtaaacg tgctgttttt gatcgcttcg
    15061 gcggtgatgt ttatcggcct gacgtggctg aaaaccaaac gtcggctgga ttagggagaa
    15121 gagcatgttt catcgcttat ggacgttaat ccgcaaagag ttgcagtcgc tgctgcgcga
    15181 accgcaaacc cgcgcgattc tgattttacc tgtgcttatt caggtgattc tgttcccgtt
    15241 cgccgccacg ctggaagtga ctaacgccac catcgccatc tacgatgaag ataacggcga
    15301 gcattcggtg gagctgaccc aacgttttac ccgcgccagc gcctttactc atgtgctgct
    15361 gctgaaaagc ccacaggaga tccgcccaac catcgacaca caaaaggcgt tactcctggt
    15421 gcgtttcccg gctgacttct cgcgcaaact ggataccttc cagaccgcgc cgttgcagtt
    15481 gatcctcgac gggcgtaact ccaacagtgc gcaaattgcc accaactacc tgcaacagat
    15541 cgtcaaaaat tatcagcagg aactgctgga aggaaaaccg aaacctaaca acagcgagct
    15601 ggtggtacgc aactggtata acccgaatct cgactacaaa tggtttgtgg tgccgtcact
    15661 gatcgccatg atcaccacta tcggcgtaat gatcgtcact tcactttccg tcgcccgcga
    15721 acgtgaacaa ggtacgctcg atcagctact ggtttcgccg ctcaccacct ggcagatctt
    15781 catcggcaaa gccgtaccgg cgttaattgt cgccaccttc caggccacca ttgtgctggc
    15841 gattggtatc tgggcgtatc aaatcccctt cgccggatcg ctggcgctgt tctactttac
    15901 gatggtgatt tacggtttat cgctggtggg attcggtctg ttgatttcat cactctgctc
    15961 gacacaacag caggcgttta tcggcgtgtt tgtctttatg atgcccgcca ttctcctttc
    16021 cggttacgtt tcgccggtgg aaaacatgcc agtatggctg caaaacctga cgtggattaa
    16081 ccctattcgc cactttacgg acattaccaa gcagatttat ttgaaggatg cgagtctgga
    16141 tattgtgtgg aatagtttgt ggccgctact ggtgataacg gccacgacag ggtcagcggc
    16201 gtacgcgatg tttagacgta aggtgatgta acttcttatc tttcgccagc aaagacacta
    16261 ccgccgggcc ggcaaggatt gccagccctg caattgccag caaaaagttg ttttccagta
    16321 cgcgggacaa cagccacagc acaatcagcg ctgcgccaaa ataccaggtc gtggtcagct
    16381 cttccaacac gtctgccacc tcacgccagc gttgctcggg gtggcgctga aacaccaaca
    16441 tcatcactac cgtgacacaa tacagtgcgc ataatcccac gccgacgtga accagagtct
    16501 tactcatcca gcccaccacc agcagcgcca ctaccagtaa atgcaacata atctgccagc
    16561 aacttagacc cgttgcgaca cgaacacgtt gttgccactt catggcttct ctcctgaaga
    16621 atttatctct acttactcag agtaccgaac tttacggaaa attccgtaag accgcacctt
    16681 tttgtgacgc cgactacact atttcaatga gataagaggc aaagacagga aaattatgcc
    16741 cgatcaaaca caacaatttt cgttcaaggt gctcaccatc aacattcaaa aaggttttac
    16801 cgcgtttaac cgacgcttca ttttgccgga acttcgcgac gcggtgcgta ccgtcagcgc
    16861 cgatattgtt tgcctgcagg aagtgatggg cgcgcacgaa gttcatccgc tgcatgtgga
    16921 aaactggccc gatacctcgc actacgagtt tctcgccgac actatgtgga gcgattttgc
    16981 ctacggtcgc aatgccgtat acccggaagg gcatcacggc aacgccgtac tgtcgcgtta
    17041 tcccattgaa cattatgaga atcgcgatgt ttcggtcgat ggtgcggaaa agcgcggcgt
    17101 gctctactgc cgcattgtgc cgccgatgac cggaaaagcg attcatgtga tgtgcgtaca
    17161 tctgggcctg cgtgaggcgc accgtcaggc gcagcttgcg atggggtgaa tgagctaccg
    17221 gacggcgaac cggtattggt ggcgggtgat ttcaatgact ggcggcaaaa agctaatcat
    17281 ccgttaaaag tgcaggccgg actggatgag atttttaccc gcgcccacgg acgcccggcg
    17341 cgcacgtttc cggtgcaatt tcctctacta cgactggaca ggatctacgt caaaaatgcc
    17401 agcgccagcg cgccaaccgc gttgccgctg cggacatggc gacacctttc tgatcatgcc
    17461 cctttaagtg cggagattca tttatgaaat gtagctggcg cgaaggcaat aagatccagt
    17521 tgctggaaaa cggcgagcaa tattatcccg cggtgtttaa ggcgattggc gaggcacaag
    17581 aacgcatcat tcttgaaacg tttatctggt ttgaggataa cgtcggcaaa cagctgcatg
    17641 cggcactact ggcagcagcg caacgcgggg ttaaagcgga agtcttgctg gatggctacg
    17701 gttcgccgga tctcagcgat gagtttgtca ataaactgac ggcagctggc gtagtgttcc
    17761 gctactacga tccccgccct cgcctttttg gtatgcgcac caatgtgttt cgccggatgc
    17821 atcgcaaaat tgtggtgatc gacgcgcgta tcgcctttat tggcgggctg aattactccg
    17881 ccgagcatat gtccagctac ggtccagagg ctaaacagga ttacgcggta cgccttgaag
    17941 ggccgattgt cgaagatatt ctccagtttg agctggaaaa cctgcctgga cagagcgcgg
    18001 cacggcgctg gtggcgacgt catcacaaag cggaagagaa ccgccagccg ggagaagcgc
    18061 aggtattgct ggtctggcgc gataacgaag aacatcgcga tgatattgaa cgccattatc
    18121 tgaaaatgct cactcaggcg cggcgggaag tgattatcgc caacgcctac ttcttccccg
    18181 gctatcgatt tttacacgcc ttgcgtaaag cggcacggcg cggggtgcgg atcaaactga
    18241 tcattcaggg cgaaccggat atgccgattg tcagagtcgg tgcgcgcttg ctgtataact
    18301 atctggttaa aggcggcgtt caggtttttg agtaccgccg ccgcccgctc cacggcaaag
    18361 tggcattgat ggacgatcac tgggcgacag tagggtccag taatctcgat ccgctcagtt
    18421 tgtcactgaa tctcgaagca aatgtcatca tccacgatcg tcattttaac cagacgctgc
    18481 gcgataatct gaacggcatt attgccgcag attgtcagca ggtggatgaa accatgctgc
    18541 ccaaacgcac ctggtggaac ctgaccaaaa gcgtgctggc gttccacttt ttacgccact
    18601 tcccggcgct ggttggctgg catccggcac acacaccacg tctgacgcag gttgatcccc
    18661 ccgcacaacc gacaatggaa acgcaggatc gggtagaaac tgaaaacacg ggggtaaaac
    18721 cctgatgagt aaatcacacc cgcgctagcg cttagcaaag aagatcctca cctggctgtt
    18781 ttttatcgcg gtgattgtgt tgctggtggt ctacgccaaa aaagtggact gggaagaggt
    18841 ctggaaggtc atccgcgact acaatcgcgt tgcgctgctt agtgcggtcg ggctggtggt
    18901 cgtcagctat ctgatttacg gctgctatga cctgctcgcc cgcttttact gcggtcacaa
    18961 actggcgaag cgccaggtga tgctggtgtc gtttatctgc tacgccttca acctgacgct
    19021 cagtacctgg gtcggcggca ttggtatgcg ctatcgtttg tactcccgac tagggttacc
    19081 gggcagcact attacgcgga ttttctcgct cagtattacc accaactggc tgggctatat
    19141 tttactggca gggattatct ttaccgcagg cgtggtggag ttgccggatc actggtatgt
    19201 cgctcaaact acgctgcgta ttctcggcat tggcttactg atgattatcg cggtttattt
    19261 gtggttttgc gctttcgcga agcaccgcca tatgaccatc aaagggcaaa agctggtgct
    19321 gccttcatgg aaattcgccc tcactcagat gctgatttcc agcgttaact ggatggtaat
    19381 gggggcgatt atctggctgt tacttggtca aagcgtgaac tatttctttg tactgggcgt
    19441 gttactggtt agtagtattg ctggcgtcat cgtgcatatt ccggcgggga tcggtgtgct
    19501 ggaagcggtg tttatcgcac tactggctgg ggagcatacc tcgaaaggga gcattatcgc
    19561 cgcgctgctc gcttatcgcg tcctgtatta ctttatcccg ctgctgctgg cgctgatctg
    19621 ttacctgcta ctggaaagcc aggcgaagaa gctacgggcg aaaaatgaag cggcgatgtg
    19681 aaatttagtt aagttcttta gtatctgcat tcacgactaa tgaaaaaaac gcgtatgcct
    19741 ttgccagaca agcgttatag ctatcgcggc aagtatccca aagaagccga taaaatagta
    19801 atagagtgtt aatgcacctg taaaagcgca acgaaccgga ctccacaact cttcactatg
    19861 gcattttcct gccagttcaa ggagcttatt tcgtccatgc gagataatgc ctggccataa
    19921 cacaatcact aagcaactta ttacccaaat gggccgttca ctcattaatg ccgcattcac
    19981 gatgattacc agggccaacc ctgtcaacgt catcataatg ataaaacggt gagaaccagg
    20041 atcaacatta aataataaac cggccagcat actgattaaa aacatcgcgc ccgcagtgct
    20101 gaacacaatg ata
//
LOCUS       DADMJE010000067        19878 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.068, whole genome shotgun sequence.
ACCESSION   DADMJE010000067 DADMJE010000000
VERSION     DADMJE010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19878)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19878)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19878
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.068"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            57..833
                     /locus_tag="JN001_002159"
     CDS             57..833
                     /locus_tag="JN001_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000200160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HAY9053385.1"
                     /translation="MTSESCALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTG
                     RAGPRPRTQALLRFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDM
                     GRRLCAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAGLKVG
                     TPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAVYSPRMATTVEAD
                     RTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINMTR"
     gene            843..1502
                     /gene="eutL"
                     /locus_tag="JN001_002160"
     CDS             843..1502
                     /gene="eutL"
                     /locus_tag="JN001_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HAY9053386.1"
                     /translation="MPALDLIRPSVTAMRVIASVNAEFARELKLPPHIRSLGLISADS
                     DDVTYIAADEATKQAMVEVVYGRSLYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDA
                     MVAHIENGAAFQWANDAENTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLEATY
                     GIDAALKSADVQLVTYVPPPSETNYSAAFLTGSQAACKAACNAFTDAVLEIARNPIQR
                     A"
     gene            1515..2015
                     /gene="eutK"
                     /locus_tag="JN001_002161"
     CDS             1515..2015
                     /gene="eutK"
                     /locus_tag="JN001_002161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutK"
                     /protein_id="HAY9053387.1"
                     /translation="MINALGLLEVDGMVAAIDAADAMLKAANVRLLSHEVLDPGRLTL
                     VVEGDLAAGRAALDAGCAAAMRTGRVISRKEIGRPDDDTQWLVTGFNRQPKQPVREPD
                     APVIVAESADELLALLTSVRQGMTAGEVAAHFGWPLEKARNALEQLFSAGTLRKRSSR
                     YRLKPH"
     gene            2061..3113
                     /gene="eutR"
                     /locus_tag="JN001_002162"
     CDS             2061..3113
                     /gene="eutR"
                     /locus_tag="JN001_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator EutR"
                     /protein_id="HAY9053388.1"
                     /translation="MKKTRTANLHHLYHEPLPENLKLTPKVEVDNVHQRQTTDVYEHA
                     LTITAWQQIYDQLHPGKFHGEFTEILLDDIQVFREYTGLALRQSCLVWPNSFWFGIPA
                     TRGEQGFIGSQCLGSAEIATRPGGTEFELSTPDDYTILGVVLSEDVITRQANFLHNPD
                     RVLHMLRSQSALEVKEQHKAALWGFVQQALATFCENPENLHQPAVRKVLGDNLLMAMG
                     AMLEDAQPMVTAESISHQSYRRLLSRAREYVLENMSEPVTVLDLCNQLHVSRRTLQNA
                     FHAILGIGPNAWLKRIRLNAVRRELISPWSQSTTVKDAAMQWGFWHLGQFVTDYQQLF
                     AEKPSLTLHQRMREWG"
     gene            complement(3119..4018)
                     /gene="hemF"
                     /locus_tag="JN001_002163"
     CDS             complement(3119..4018)
                     /gene="hemF"
                     /locus_tag="JN001_002163"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HAY9053389.1"
                     /translation="MKPDAHQVKQFLLNLQDTICQQLTAVDGAEFVEDSWQREAGGGG
                     RSRVLRNGGVFEQAGVNFSHVHGEAMPASATAHRPELAGRSFEAMGVSLVVHPHNPYV
                     PTSHANVRFFIAEKPGAEPVWWFGGGFDLTPFYGFEEDAIHWHRTARDLCLPFGEDVY
                     PRYKKWCDDYFYLKHRNEQRGIGGLFFDDLNTPDFDHCFAFMQAVGKGYTDAYLPIVE
                     RRKAMAYGERERNFQLYRRGRYVEFNLVWDRGTLFGLQTGGRTESILMSMPPLVRWEY
                     DYQPKDGSPEAALSEFIKVRDWV"
     gene            complement(4022..4891)
                     /gene="amiA"
                     /locus_tag="JN001_002164"
     CDS             complement(4022..4891)
                     /gene="amiA"
                     /locus_tag="JN001_002164"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiA"
                     /protein_id="HAY9053390.1"
                     /translation="MSTFKPLKTLTSRRQVLKAGLAALTLSGMSQAIAKDEPLKTSNG
                     HSKPKAKKSGGKRVVVLDPGHGGIDTGAIGRNGSKEKHVVLAIAKNVRSILRNHGIDA
                     RLTRSGDTFIPLYDRVEIAHKHGADLFMSIHADGFTNPKAAGASVFALSNRGASSAMA
                     KYLSERENRADEVAGKKATDKDHLLQQVLFDLVQTDTIKNSLTLGSHILKKIKPVHKL
                     HSRNTEQAAFVVLKSPSVPSVLVETSFITNPEEERLLGTAAFRQKIATAIAEGVISYF
                     HWFDNQKAHSKKR"
     gene            5105..5530
                     /locus_tag="JN001_002165"
     CDS             5105..5530
                     /locus_tag="JN001_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase YpeA"
                     /protein_id="HAY9053391.1"
                     /translation="MEIRVFRQEDFEEVITLWERCDLLRPWNDPEMDIERKMNHDVSL
                     FLVAEVNGEVVGTVMGGYDGHRGSAYYLGVHPEFRGRGIANALLNRLEKKLIARGCPK
                     IQINVPEDNDMVLGMYERLGYEHADMLSLGKRLIEDEEY"
     gene            5517..5966
                     /locus_tag="JN001_002166"
     CDS             5517..5966
                     /locus_tag="JN001_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2919 domain-containing protein"
                     /protein_id="HAY9053392.1"
                     /translation="MKSTEFHPVHYDAHGRLRLPLLFWLVLLLQARTWVLFIIAGASR
                     EQGTALLNLFYPDHDNFWLGLIPGIPAVLAFLLSGRRASFPRTWHVLYFLLLLAQVVL
                     LCWQPWLWLNGESVSGIGLALVVADIVALIWLLTNRRLRACFNEEKE"
     gene            6173..6748
                     /locus_tag="JN001_002167"
     CDS             6173..6748
                     /locus_tag="JN001_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpoE-regulated lipoprotein"
                     /protein_id="HAY9053393.1"
                     /translation="MKSLRLMLCAMPLMLTGCSTMSSVNWSAANPWNWFGSSTKVSEQ
                     GVGELTASTPLQEQAIADALDGDYRLRSGMKTANGNVVRFFEVMKGDNVAMVINGDQG
                     TISRIDVLDSDIPADTGVKIGTPFSDLYSKAFGNCQKADGDDNRAVECKAEGSQHISY
                     QFRGEWRGPEGLMPSDDTLKNWKVSKIIWRR"
     gene            6844..7743
                     /gene="yfeX"
                     /locus_tag="JN001_002168"
     CDS             6844..7743
                     /gene="yfeX"
                     /locus_tag="JN001_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311329.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphyrinogen peroxidase"
                     /protein_id="HAY9053394.1"
                     /translation="MSQVQSGILPEHCRAAIWIEANVKGEVDALRAASKTFADKLATF
                     EAKFPDAHLGAVVAFGNNTWRALSGGVGAEELKDFPGYGKGLAPTTQFDVLIHILSLR
                     HDVNFSVAQAAMEAFGDCIEVKEEIHGFRWVEERDLSGFVDGTENPAGEETRREVAVI
                     KDGVDAGGSYVFVQRWEHNLKQLNRMSVHDQEMMIGRTKEANEEIDGDERPETSHLTR
                     VDLKEDGKGLKIVRQSLPYGTASGTHGLYFCAYCARLHNIEQQLLSMFGDTDGKRDAM
                     LRFTKPVTGGYYFAPSLDKLMAL"
     gene            complement(7801..9105)
                     /gene="pbp4b"
                     /locus_tag="JN001_002169"
                     /pseudo
     CDS             complement(7801..9105)
                     /gene="pbp4b"
                     /locus_tag="JN001_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311328.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin binding protein PBP4B"
     gene            complement(9110..10534)
                     /gene="murP"
                     /locus_tag="JN001_002170"
     CDS             complement(9110..10534)
                     /gene="murP"
                     /locus_tag="JN001_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N-acetylmuramic acid transporter subunit
                     IIBC"
                     /protein_id="HAY9053395.1"
                     /translation="MAKEISSELLNTILTRVGGPGNIASCGNCMTRLRLGVHDSSLVD
                     PNIKTLEGVKSVILTSDQVQVVFGPGKAHRAAKAMSELLGEAPVQDAAEIAAQNKRQL
                     KAKQTSGVQQFLAKFATIFTPLIPGFIAAGLLLGIATLIATVMHVPADAQGTLPDALN
                     FMKVFSKGLFTFLVILVGYNAAQAFGGTGVNGAIIAALFLLGYNPAATTGYYAGFHDF
                     FGLPIDPRGNIIGVLIAAWACARIEGMVRRFMPDDLDMLLTSLITLLITATLAYLIIM
                     PLGGWLFEGMSWLFMHLNSNPFGCAVLAGLFLIAVVFGVHQGFIPVYLALMDSQGFNS
                     LFPILSMAGAGQVGAALALYWRSQPHSALRSQVRGAIIPGLLGVGEPLIYGVTLPRMK
                     PFVTACLGGAAGGLFIGLIAWWGLPMGLNSAFGPSGLVALPLMTSAQGILPAMAVYAG
                     GILVAWVCGFIFTTLFGCRNVNLD"
     gene            complement(10538..11434)
                     /gene="murQ"
                     /locus_tag="JN001_002171"
     CDS             complement(10538..11434)
                     /gene="murQ"
                     /locus_tag="JN001_002171"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HAY9053396.1"
                     /translation="MQLEKMITEGSNAASAEIDRVSTLEMCRIINDEDKTVPLAVERV
                     LPDIAAAIDVIHAQVSGGGRLIYLGAGTSGRLGILDASECPPTYGVKPGLVVGLIAGG
                     EYAIQHAVEGAEDSREGGVNDLKNINLTAQDVVVGIAASGRTPYVIAGLEYARQLGCR
                     TVGISCNPGSAVSTTAEFAITPIVGAEVVTGSSRMKAGTAQKLVLNMLSTGLMIKSGK
                     VFGNLMVDVVATNEKLHVRQVNIVKNATGCNAEQAEAALIACERNCKTAIVMVLKNLD
                     AAEAKKRLDQHGGFIRQVLDKE"
     gene            11598..12455
                     /gene="murR"
                     /locus_tag="JN001_002172"
     CDS             11598..12455
                     /gene="murR"
                     /locus_tag="JN001_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MurR"
                     /protein_id="HAY9053397.1"
                     /translation="MLYLTKISNAGSEFTENEQKIADFLQANVSELQSVSSRQMAKQL
                     GISQSSIVKFAQKLGAQGFTELRMALIGEYSASREKTNTTALHLHSSITSDDSLEVIA
                     RKLNREKELALEQTCALFDYARLQKIIEVISKAPFIQITGLGGSALVGRDLSFKLMKI
                     GYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARKQGATVIAITSL
                     ADSPLRRLAHFTLDTVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQLNDVASLKMIQR
                     SSELTQRLK"
     gene            12584..13375
                     /gene="ucpA"
                     /locus_tag="JN001_002173"
     CDS             12584..13375
                     /gene="ucpA"
                     /locus_tag="JN001_002173"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416921.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase UcpA"
                     /protein_id="HAY9053398.1"
                     /translation="MGKLTGKTALITGALQGIGEGIARTFARHGANLILLDISPEIEK
                     LADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMS
                     DDDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKA
                     AIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPM
                     RRLADPLEVGELAAFLASDESSYLTGTQNVIDGGSTLPETVSVGI"
     gene            13679..14695
                     /locus_tag="JN001_002174"
     CDS             13679..14695
                     /locus_tag="JN001_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9053399.1"
                     /translation="MAVNLLKKNSLALVASLLLAGHVQATELLNSSYDVSRELFAALN
                     PPFEQQWAKDNGGDKLTIKQSHAGSSKQALAILQGLKTDVVTYNQVTDVQILHDKGKL
                     IPADWQSRLPNNSSPFYSTMGFLVRKGNPKNIHDWNDLVRSDVKLIFPNPKTSGNARY
                     TYLAAWGAADKADGGDKAKTEQFMTQFLKNVEVFDTGGRGATTTFAERGLGDVLISFE
                     SEVNNIRKQYEAQGFEVVIPKTNILAEFPVAWVDKNVQANGTEKAAKAYLNWLYSPQA
                     QTIITDYYYRVNNPEVMDKLKDKFPQTELFRVEDKFGSWPEVMKTHFTSGGELDKLLA
                     AGRN"
     gene            14695..15528
                     /gene="cysT"
                     /locus_tag="JN001_002175"
     CDS             14695..15528
                     /gene="cysT"
                     /locus_tag="JN001_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000458418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysT"
                     /protein_id="HAY9053400.1"
                     /translation="MFAVSSRRVLPGFTLSLGTSLLFVCLILLLPLSALVMQLAQMSW
                     AQYWEVITNPQVVAAYKVTLLSAFVASIFNGVFGLLMAWILTRYRFPGRTLLDALMDL
                     PFALPTAVAGLTLASLFSVNGFYGEWLAKFDIKVTYTWLGIAVAMAFTSIPFVVRTVQ
                     PVLEELGPEYEEAAETLGATRWQSFCKVVLPELSPALVAGVALSFTRSLGEFGAVIFI
                     AGNIAWKTEVTSLMIFVRLQEFDYPAASAIASVILAASLLLLFSINTLQSRFGRRVVG
                     H"
     gene            15528..16403
                     /gene="cysW"
                     /locus_tag="JN001_002176"
     CDS             15528..16403
                     /gene="cysW"
                     /locus_tag="JN001_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter permease
                     CysW"
                     /protein_id="HAY9053401.1"
                     /translation="MAEVTQLKRYDARPINWGKWFLIGIGMLVSAFILLVPMIYIFVQ
                     AFSKGLMPVLQNLADPDMLHAIWLTVMIALIAVPVNLVFGILLAWLVTRFNFPGRQLL
                     LTLLDIPFAVSPVVAGLVYLLFYGSNGPLGGWLDEHNLQIMFSWPGMVLVTIFVTCPF
                     VVRELVPVMLSQGSQEDEAAILLGASGWQMFRRVTLPNIRWALLYGVVLTNARAIGEF
                     GAVSVVSGSIRGETLSLPLQIELLEQDYNTVGSFTAAALLTLMAIITLFLKSMLQWRL
                     ENQEKRAQQEEHHEH"
     gene            16393..17490
                     /gene="cysA"
                     /locus_tag="JN001_002177"
     CDS             16393..17490
                     /gene="cysA"
                     /locus_tag="JN001_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate/thiosulfate ABC transporter ATP-binding
                     protein CysA"
                     /protein_id="HAY9053402.1"
                     /translation="MSIEIANIKKSFGRTQVLNDISLDIPSGQMVALLGPSGSGKTTL
                     LRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVFDNIAFGLTVL
                     PRRERPNAAAIKAKVTKLLEMVQLAHLADRYPAQLSGGQKQRVALARALAVEPQILLL
                     DEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEATEVADRVVVMSQGNIEQA
                     DAPDQVWREPATRFVLEFMGEVNRLQGTIRGGQFHVGAHRWPLGYTPAYQGPVDLFLR
                     PWEVDISRRTSLDSPLPVQVLEASPKGHYTQLVVQPLGWYNEPLTVVMHGDDAPQRGE
                     RLFVGLQHARLYNGDERIETRDEELALAQSA"
     gene            17624..18535
                     /gene="cysM"
                     /locus_tag="JN001_002178"
     CDS             17624..18535
                     /gene="cysM"
                     /locus_tag="JN001_002178"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase B"
                     /protein_id="HAY9053403.1"
                     /translation="MSTLEQTIGNTPLIKLQRMGPNNGSEVWLKLEGNNPAGSVKDRA
                     ALSMIVEAEKRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAA
                     MRAYGAELILVTKEQGMEGARDLALEMANRGEGKLLDQFNNPDNPYAHYTTTGPEIWQ
                     QTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEGSSIPGIRRWPAEYLP
                     GIFNASLVDEVLDIHQRDAENTMRELAVREGIFCGVSSGGAVAGALRVAKANPGAVVV
                     AIICDRGDRYLSTGVFGEEHFSQGAGI"
     gene            complement(18538..18906)
                     /locus_tag="JN001_002179"
     CDS             complement(18538..18906)
                     /locus_tag="JN001_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfeK family protein"
                     /protein_id="HAY9053404.1"
                     /translation="MKKIICLVITLLMTLPAYAKLTAHEEARINAMLEGLSQKKDLIF
                     VRNGDEHTCDEAVSHLRLKLGNTRNRIDTAEQFIDKVASSSSITGKPYIVKIPGKSDE
                     NAQPFLHALIAQTDKTVPAQ"
     gene            19011..19862
                     /gene="pdxK"
                     /locus_tag="JN001_002180"
                     /gene_synonym="thiJ"
     CDS             19011..19862
                     /gene="pdxK"
                     /locus_tag="JN001_002180"
                     /gene_synonym="thiJ"
                     /EC_number="2.7.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HAY9053405.1"
                     /translation="MSSLLLFNDKSRALQADIVAVQSQVVYGSVGNSIAVPAIKQNGL
                     NVFAVPTVLLSNTPHYDTFYGGAIPDEWFSGYLRALQERDALRQLRAVTTGYMGTASQ
                     IKILAEWLTALRKDHPDLLIMVDPVIGDIDSGIYVKPDLPEAYRQYLLPLAQGITPNI
                     FELEILTGKNCRDLDSAIAAAKSLLSDTLKWVVITSASGNEENQEMQVVVVSADSVNV
                     ISHSRVKTDLKGTGDLFCAQLISGLLKGKALNDAVHRAGLRVLEVMRYTQQHESDELI
                     LPPLAEA"
BASE COUNT         4578 a         5044 c         5607 g         4649 t
ORIGIN      
        1 aaacggcccc cgcgctgtca gaagcaaagt gcaccaccac cacctgtgcg gcaccggtga
       61 cctcggaaag ctgcgcgctg gatttaggtt ctgcggaagc aaaagcgtgg attggtgttg
      121 aaaacccgca tcgcgcagac gtattaacag aactgcgtcg cagcaccgtg gcccgcgttt
      181 gtaccggtcg tgccggtccg cgtccgcgta cccaggcgtt gctgcgtttc ctggccgatc
      241 actctcgttc gaaagatacc gtactgaaag aagtgccgga agagtgggtg aaagcgcagg
      301 gcttgctgga agtacgctcc gaaattagcg acaaaaatct ctacctgact cgcccggata
      361 tgggccgccg cctgtgtgca gaagctgttg aagcgctgaa agcacagtgt gttgctaatc
      421 cggacgtaca ggtcgttatt tctgatggcc tgtcaactga tgccatcacc gtgaactacg
      481 aagagatcct gccgccgctg atggcgggcc tgaaacaggc cgggctgaaa gtcggcacgc
      541 cattctttgt tcgttatggt cgcgtgaaga ttgaagatca gatcggtgag atcctcggcg
      601 cgaaagtggt gatcctgctg gtgggggaac gtccggggtt gggtcagtca gaaagcctct
      661 cctgttacgc cgtttactcg ccgcgtatgg cgaccaccgt tgaggccgat cgcacctgca
      721 tctctaacat tcaccagggc ggcacgccgc cggttgaagc cgcagccgtc attgtggatt
      781 tggcgaaacg tatgctggag cagaaagcat ccggcatcaa catgacccga taaggaggca
      841 tcatgccagc tttagatttg attcgaccgt cggtaaccgc catgcgggtg attgcctccg
      901 ttaacgctga atttgcgcgt gaactaaaat tgccgccgca tattcgtagc ctcgggctga
      961 tttctgctga ttccgatgac gtcacctaca ttgcggctga cgaagcgacc aagcaggcga
     1021 tggtcgaagt ggtatatggc cgctcgctgt atgcgggagc agcacacgga ccgtcaccga
     1081 ctgccggtga agtgctgatt atgcttggtg ggccaaaccc ggcggaagtg cgtgctggtc
     1141 tggatgcgat ggttgcgcat attgaaaatg gcgctgcttt ccagtgggct aatgacgcag
     1201 aaaacaccgc attcctggca catgtagttt cgcgtaccgg ttcttatctc tcatcaaccg
     1261 ccgggatcac gcttggcgat ccgatggcgt atctggtggc accgccgctg gaagcgacct
     1321 acggcattga tgcagcgttg aaatctgccg acgtacagct ggtgacctat gtcccgccac
     1381 cgtctgaaac caactactcg gcagcatttt taaccggtag ccaggccgcg tgtaaagcag
     1441 cctgtaacgc ctttaccgat gcagtgctgg aaatcgcgcg taatccaatc cagcgtgcgt
     1501 aacggaggtt gccgatgatc aatgcactgg gattgctgga agtggacggc atggtcgccg
     1561 cgatagatgc agcggatgcc atgctcaaag cagctaacgt tcgtctgctc agtcacgaag
     1621 tgcttgaccc tggtcgctta acgctggtgg tggaaggcga tctggcggcg ggtcgtgcgg
     1681 cgctggacgc aggttgtgct gccgcgatgc gtaccgggcg tgtcatcagc cgcaaggaga
     1741 tcggtcggcc agacgatgac acccagtggc tggttactgg ctttaaccgc cagccgaagc
     1801 aacccgtaag ggaacccgac gcgccagtta tcgtcgcgga atctgctgac gagttgttgg
     1861 cgctgttaac atcagtacgt cagggaatga cggcaggaga agtggctgcc cactttggct
     1921 ggccgctgga aaaagccaga aatgcgctcg aacagctctt ttctgccggg acgttacgta
     1981 aacgcagtag tcgttatcgt ctcaagcccc attaacctgt cggaggtgct gggtgtccta
     2041 caacacccgg cattaacatc atgaaaaaga cccgtacagc caatttgcac catctttatc
     2101 atgaaccctt acccgaaaac ctgaagctca cgccgaaggt cgaagtggat aatgttcatc
     2161 aacgacagac aacggatgtc tatgaacatg ctttaacgat taccgcctgg cagcagattt
     2221 acgatcagct gcatccgggc aagtttcatg gtgaatttac ggaaattcta ctcgatgata
     2281 ttcaggtttt tcgtgaatac accggtctgg cgctgcgtca gtcgtgcctg gtctggccga
     2341 actcgttctg gtttggcatt ccggcgacgc gcggtgagca gggatttatc ggttcgcaat
     2401 gtctgggaag cgcggaaatc gccacccgcc ctggtggcac tgaatttgaa ctgagcacgc
     2461 cggatgatta cacgatcctg ggcgtggtgc tttctgaaga tgtcatcacc cggcaggcta
     2521 actttttgca taacccggat cgggtattac atatgctgcg tagccagtcg gcgctggaag
     2581 tgaaagagca gcataaagcc gcgctgtggg gctttgtcca acaggcgctg gcgacgtttt
     2641 gcgagaaccc ggaaaatctc catcagcctg cagtgcgaaa agtgctgggg gataatttgc
     2701 taatggcgat gggggcgatg ctggaagacg cgcaaccaat ggtgacggcg gaaagcatca
     2761 gtcatcagag ttaccgtaga ttactttccc gcgcccgtga atatgtgctg gaaaatatgt
     2821 ctgagccggt gacggtgctg gacttgtgta atcaactgca tgtcagtcgc cgcacgctac
     2881 aaaacgcgtt tcacgctatt ttaggcattg gcccaaacgc gtggctgaaa cgcattcgcc
     2941 tgaacgccgt acgccgcgaa ctgataagcc cgtggtcgca aagcacaacg gtaaaagacg
     3001 ccgccatgca gtggggattc tggcatctgg ggcaatttgt cacggattac cagcagctgt
     3061 ttgccgagaa gccgtcgttg acgttgcatc agcggatgcg ggaatggggg tgagggagtt
     3121 acacccaatc cctgacctta ataaactcac ttaacgccgc ttctgggctg ccatcttttg
     3181 gctgataatc atactcccag cgtaccagtg gcggcattga catcaggatc gactcggtgc
     3241 gcccgccagt ttgcaggcca aacagagtgc cgcgatccca gaccagattg aactcgacat
     3301 aacgaccgcg acggtagagc tgaaaattgc gctcgcgctc gccgtaggcc attgctttac
     3361 gtcgctctac aattggtaaa taagcgtcgg tgtagccttt gcctaccgcc tgcataaagg
     3421 caaaacagtg gtcgaaatct ggcgtgttca gatcatcaaa gaacagcccg ccaataccgc
     3481 gctgttcgtt gcgatgtttg aggtagaagt aatcgtcgca ccactttttg taacggggat
     3541 aaacgtcttc accaaatggc aggcacaggt cacgggcggt gcggtgccag tgaatggcgt
     3601 cttcttcaaa accatagaaa ggggttaaat cgaagccgcc gccaaaccac cagacgggct
     3661 ctgcacccgg tttttcggca ataaaaaaac gcacattcgc gtggctggtg ggaacatacg
     3721 ggttatgcgg atgcactacc agtgaaacgc ccatcgcctc gaaactgcgc ccggcaagtt
     3781 ccgggcgatg agcggtggcg gaagcaggca tcgcctcgcc gtggacgtga gaaaagttga
     3841 cgcctgcctg ttcgaaaaca ccaccattac gcaacacccg actacgcccg ccgccgccag
     3901 cttcgcgctg ccaactatct tcgacaaatt ctgcgccatc gacggcggtc agctgctgac
     3961 aaatcgtatc ctgaaggttg agcagaaact gtttaacctg gtgtgcgtcg ggtttcataa
     4021 cttatcgctt tttcgaatgt gctttctggt tgtcgaacca gtggaaataa ctgatcacgc
     4081 cttcagcaat cgctgtggcg attttctgac gaaacgccgc cgtgcctaac agccgctctt
     4141 cttccgggtt ggtgataaac gaggtttcca ccagcaccga aggaaccgac ggcgatttca
     4201 acaccacaaa cgcggcttgt tcggtgttgc ggctgtgcag tttatgcacc ggcttaatct
     4261 ttttcagaat atgcgagcca agcgtcaggc tgtttttaat agtatcggtt tgcaccagat
     4321 caaacagcac ttgctgcaat aggtgatcct tgtcagtcgc ctttttaccg gcaacttcat
     4381 cggcgcggtt ttcgcgttca gacaggtatt tcgccattgc gctacttgcc ccacggttag
     4441 agagggcaaa taccgaagca ccggcagctt tcgggttggt aaagccatcg gcatgaattg
     4501 acataaacag atctgcgcca tgtttatggg cgatttcaac gcgatcgtaa agtgggataa
     4561 acgtatcgcc agaacgcgtt aaacgcgcat caatcccatg attacgcaaa atggaacgga
     4621 cgtttttagc aatcgccagc accacatgtt tttctttcga accgttgcgt ccgatcgctc
     4681 cggtatcaat tccgccgtgg cctggatcga gaacaacgac acgtttgccg ccagattttt
     4741 tggctttcgg cttgctgtgt ccgttgctgg tttttaaagg ttcgtctttg gcgatggctt
     4801 gcgacattcc tgacaacgtc agggcagcca aaccggcttt cagcacctgg cggcgcgaag
     4861 tgagtgtttt tagtggttta aaagtgctca tacggcctga gttgtaataa taaagttcca
     4921 gatgttatat cgtatcgcgt aatccgttac gacggtttga tgttgagaat tgttttactt
     4981 ttcatttcaa tagttgacaa ctccccatta tgccactttt tcaaccgatt ttcgtcagat
     5041 attggctaat tctaccgttc acgccataat cagcctttta acccgcaaaa aggtaacgaa
     5101 taccatggag atacgcgtat ttcgccagga agatttcgaa gaggtcatca ccctttggga
     5161 gcgttgcgac ttgctgcgtc cgtggaacga tccggaaatg gacatcgagc gtaagatgaa
     5221 ccatgacgtc agtttgtttt tggtcgctga ggtgaacggt gaagtggtcg gaacggtgat
     5281 gggcggttat gacgggcatc gcgggtctgc ttattatctt ggcgtgcatc cagagtttcg
     5341 tgggcgtggg attgccaatg cgttgcttaa tcggctggag aaaaagctga ttgctcgtgg
     5401 ctgcccgaaa attcagatca atgtgccgga agataacgac atggtgctcg gaatgtatga
     5461 acgcctggga tatgaacacg ccgacatgct gagtctgggt aagcgtttga ttgaagatga
     5521 agagtactga gttccatcct gtccattatg atgcgcacgg acgcctgcgt ttacccttgc
     5581 tcttctggct tgtgctattg cttcaggcgc gaacctgggt gctgtttatc attgccggtg
     5641 cgtcgcgcga gcagggtact gcgctgctaa atctgtttta tcccgatcac gataatttct
     5701 ggctggggtt gattcccggt attccggcgg tgctggcgtt tttgttgagc ggtcggcggg
     5761 cttcgtttcc tcgcacctgg catgtgctct attttctgtt gctgttggcg caggtggttt
     5821 tactttgctg gcaaccgtgg ctgtggctga acggtgaatc cgttagcggt atcggtctgg
     5881 cgctggtagt ggcggatatt gtggcgttaa tctggctgct gaccaatcga cgtttacgcg
     5941 cttgttttaa tgaagaaaaa gaataacgca gaggtgcgct ttgtttatgc cggatgcggc
     6001 gtgaacgcct tatccggcct acaaaacatc gaaaattcaa tatattgcag gagaaagtag
     6061 gcctgataag cgtagcgcat caggcaattt tgtgtttgtc atcaaccttt aacggcactt
     6121 tttggtgaat ttgcactcca agcaacgtta ttgaataacc aaaggaagtg acatgaaatc
     6181 gctgcgttta atgttatgcg ctatgccgtt gatgctgacc ggctgttcca cgatgtcgtc
     6241 agttaactgg tcggctgcta acccgtggaa ctggtttgga tcgtccacca aagtgagcga
     6301 gcagggtgtg ggtgaattaa cggcgtccac accactgcaa gaacaagcca ttgctgatgc
     6361 gcttgatggc gattatcgcc tgcgcagcgg aatgaaaacc gcgaacggca acgtggtgcg
     6421 cttttttgaa gtgatgaaag gcgacaacgt ggcgatggtg attaacggcg atcaaggcac
     6481 gatcagtcgc attgacgtgc tggatagcga tattcctgct gacaccggtg ttaaaatcgg
     6541 tacaccgttt agcgaccttt acagcaaagc atttggcaat tgccaaaaag ctgatggtga
     6601 tgataatcgt gccgtcgaat gtaaagccga aggcagtcaa catattagct accagttcag
     6661 aggggaatgg cgtggtcctg aagggttaat gccttcggac gataccctga aaaactggaa
     6721 agtcagtaaa attatctggc ggcgttaatt tgcgtctgaa caaaccgccg ccgcgaaaaa
     6781 acacgtaaaa tagcgctcaa caatgccacg gattgcgtgg cattcttatt ttcaggagga
     6841 acaatgtctc aggttcagag tggcattttg ccagaacatt gccgcgcggc gatttggatc
     6901 gaagccaacg tgaaagggga agttgacgcc ctgcgtgcgg ccagtaaaac atttgccgac
     6961 aaactggcaa cttttgaagc gaaattcccg gacgcgcatc ttggtgcggt ggttgccttt
     7021 ggtaacaaca cctggcgcgc tctgagcggc ggcgttgggg cagaagagct gaaagatttt
     7081 ccgggctacg gtaaaggcct tgcgccgacg acccagttcg atgtgttgat ccacattctt
     7141 tctctgcgtc acgacgtaaa cttctctgtc gctcaggcgg cgatggaagc ctttggtgac
     7201 tgcattgaag tgaaagaaga gatccacggc ttccgttggg tggaagagcg tgacctgagc
     7261 ggctttgttg acggtacaga aaacccggcg ggtgaagaga cgcgccgcga agtggcggtt
     7321 atcaaagacg gcgtggatgc cggcggcagc tatgtgtttg tgcagcgttg ggagcacaac
     7381 ctgaagcagc tcaaccggat gagcgttcac gatcaggaga tgatgatcgg gcgcaccaaa
     7441 gaggccaacg aagagattga cggcgacgaa cgtccggaaa cctctcacct cacccgcgtt
     7501 gatctgaaag aagatggcaa agggctgaag attgttcgcc agagcctgcc gtacggcacc
     7561 gccagtggca ctcacggtct gtacttctgc gcctactgcg cgcgtctgca taacattgag
     7621 cagcaactgc tgagcatgtt tggcgatacc gatggtaagc gtgatgcgat gttgcgcttc
     7681 accaaaccgg taaccggcgg ctattacttc gcgccgtcgc tggacaagct gatggcgctg
     7741 taagcgtttc tgattctatg attaaaggcc agccagtaac aaaactgact ggccttttta
     7801 ttacttttgc ttcaacgccg catacacctg atcaactacc caaccataag ttgcaatcgg
     7861 taactgaccg ctttcgaaca tattgggatt tttttgtgga tcggcaactg gcgaatgggg
     7921 cttgttgctt aacatcacaa tcgccatatg attgaccgga tcgataacgg ttactgtccc
     7981 ggtccagcca gtgtgaccgt aggtttgcgg gcttgccagc gtgccaaacg tcggcgtcat
     8041 ggtggcatta ccattcacgc gccagccgag gccaaaagtg gcatcttcct tagagctggt
     8101 ggtgaacatc ttcaccgttt ccgcactgaa cagctgcaca tcgccatagc ccccgccgtt
     8161 cagcatcgtt tgcattaaca ccgcaatatc gccggtattg gaaaacaaac ctgcgtgccc
     8221 ggaaacgccg cccatcgaat aaaaggcttt ttcatcgtgc acctgacccc agagagtgga
     8281 ggtgcggata ttcgggaaat ggatcacgcc atcgcgggta ttgccgttca attccgtggc
     8341 ggcaatttgt tgcggtttaa agcctttcag cagcgggtta aataccgtat gtgtcaggcc
     8401 gagcgggcga taaatcgact cttcaacata gcggtcaagc ggctgaccgg taaccgactc
     8461 gacgataaat ccaagcagca tataatcgac atcgctgtag atatgtttgc tgccgggctg
     8521 atattccagc ggcgtgcgct tgatcatctc cagcgtctgg cctttatcct aggaatataa
     8581 cacgcccgcg accgctttat tcgggtattg cggatctgcc gggaaaccgc cgctgtgatg
     8641 cagcaggtca gaaatccgca gggtgttttt gcctttaatg gtgtcatttg gactatcggc
     8701 aaaccccgga atatatttcg caatccgatc gtcaggatgc agtttgcctt cgctcatcag
     8761 cttttgcagg gcgaagttcg tggcgtacat tttggtgttt gaggccaggt catacagcgt
     8821 cccggtggtg gctttgacag gctgttccat caacacgctg ccatcgtact ttttcgccgc
     8881 tccccaggct ttgcgataca caatctgatt atctttaatg atcagcaggt ttacgccggg
     8941 ataaccggca tcaacttgct ggctaatcca gcgatccatc tggttaagcc gtttgacgtt
     9001 aaaccctgct ttctctggcg agctttctgt cagaacaggg tattttgcgg cgctgacgct
     9061 acaactaaca gccagcagag aaagatagag cattgtccgt ttcatgatat cagtccagat
     9121 tgacgttacg gcagccaaag agcgtggtga aaataaaccc gcaaacccat gccaccagaa
     9181 tcccgccagc ataaaccgcc atggccggaa ggatgccttg tgcggaagtc atcagcggca
     9241 gcgctaccag accagacggc ccaaaggcgc tgtttaagcc catcggcaga ccccaccagg
     9301 ctatcaggcc gataaacaaa ccgcccgccg caccgcctaa acaggcggtg acaaacggct
     9361 tcatgcgggg cagggtgaca ccgtaaatca gcggttcacc aacgcccagc aggccgggaa
     9421 taatcgcccc gcgtacctga ctgcgtagcg cactgtgcgg ttgcgaccgc cagtagagtg
     9481 ccagcgccgc gcccacctgg cccgcgcctg ccattgaaag gatgggaaat aagctgttga
     9541 atccctggct gtccattaac gcgaggtaaa caggaataaa gccctgatgc acgccaaata
     9601 ccacggcgat caggaacagc ccggctaaaa ccgcacaacc gaacggatta ctgttcaggt
     9661 gcataaacag ccatgacata ccttcgaata accagccacc cagcggcata atgatcaggt
     9721 acgcaagcgt agcggtgatc agcagggtga ttaacgaggt cagcagcatg tcgagatcgt
     9781 ccggcataaa gcggcgcacc atgccttcaa tgcgggcgca ggcccacgcg gcaatcagca
     9841 cgccgataat attgccgcgc ggatcgatgg gcagaccaaa gaaatcgtga aaaccggcgt
     9901 agtaaccggt ggttgcagcg gggttataac cgagcaaaaa gagtgcggca ataattgcgc
     9961 cattgacgcc cgtgccgcca aatgcctggg cggcgttata gcccaccaga atcaccagga
    10021 aggtgaacaa acctttgctg aacaccttca taaaattcag cgcgtcgggt agcgtgccct
    10081 gagcatctgc cggaacgtgc atcaccgtgg caattaacgt cgctatcccc agcagcagac
    10141 cggcggcaat aaaaccgggg atcagcggcg tgaagatggt ggcgaatttg gcgagaaatt
    10201 gttgcacgcc ggaggtttgt ttggctttta actgacgttt gttctgggcg gcgatttctg
    10261 cggcatcctg taccggtgcc tcgcccagca gctcgctcat cgcttttgcg gcacgatgcg
    10321 ctttaccagg tccaaaaacg acctgcacct ggtcgctggt caaaatgacg ctcttcacgc
    10381 cttccagcgt tttgatattg ggatcaacca gtgaactgtc atgtacaccc agacgcaggc
    10441 gcgtcataca gttaccacaa ctggcgatat ttcccggtcc gccgacacgg gtaagaatgg
    10501 tgttcagaag ttcactgctg atctctttgg ccatgggtta ttccttgtct aaaacctgac
    10561 gaataaagcc gccgtgttga tccaggcgtt ttttagcttc tgcggcatcg agatttttca
    10621 gcaccatcac aatggccgtt ttacagttgc gctcgcaggc aattaacgcc gcttccgctt
    10681 gttcggcatt acatccggtg gcgtttttaa cgatattgac ctggcgcaca tgcagttttt
    10741 cgttggtggc gaccacatcg accataaggt tgccgaacac tttgccggat ttaatcatca
    10801 gcccggtgga aagcatattg agcaccagtt tctgcgctgt acctgctttc atccgcgaag
    10861 aaccggtaac aacttcggca cctacaatcg gtgtaatggc aaactcagcg gtggttgaaa
    10921 cggcgctccc cggattacag gaaattccca ctgtgcggca gccgagctgg cgtgcgtatt
    10981 ccagtccggc aatcacatac ggcgtgcgac cgctggcagc aatgccaacc accacatcct
    11041 gtgccgttaa attaatattt ttcagatcat taacaccgcc ttcccggcta tcttccgcgc
    11101 cttccaccgc gtgctgaatg gcatattcgc cgccagcaat caaaccaacc accagacccg
    11161 gtttcacgcc gtaggtgggc ggacattcgc tggcatccag aatccccaga cgaccggatg
    11221 ttcccgcacc gaggtaaatc agacgcccgc cgccgcttac ctgggcgtgg ataacatcga
    11281 tcgccgcggc gatatccggc agtacgcgct caacggcaag cggtacggtt ttatcttcat
    11341 cgttgataat ccggcacatt tccagcgttg atacgcggtc aatttcagcc gaggcggcgt
    11401 tcgagccttc agtaatcatc ttttcaagtt gcatcggtgg tgaccttact atttacgatc
    11461 aaataattgc agatgtatgg aatcatatat cctgaattga cagacttaaa ggaatcattg
    11521 agtctacact cgcagagtgt gaagagcgtc ataagaactt aagcggaatt tatgctgcca
    11581 gcccaggaga gtggaagatg ttgtacctga cgaaaataag caatgcgggg agtgaattca
    11641 ccgaaaacga gcaaaaaatc gctgactttc tgcaggccaa cgtgagtgag ctgcaatccg
    11701 tttcttcacg gcagatggcg aaacagctcg gcattagcca gtcgagcata gtgaaatttg
    11761 cccaaaaact cggcgcgcaa ggatttactg aattgcgtat ggcgttaata ggcgaataca
    11821 gtgctagccg ggagaaaacg aataccacgg cgctgcacct gcacagttcg attaccagtg
    11881 atgattcgct ggaagtgatt gcccgcaaat tgaatcgcga aaaagagctg gcgctggagc
    11941 aaacctgtgc gttgttcgac tacgcgcggc tgcaaaaaat cattgaggtc atcagtaaag
    12001 caccgtttat ccagataacg ggcctgggcg gatcggcgct ggtggggcgc gatctgtcgt
    12061 tcaaactgat gaaaattggc tatcgcgtgg cctgcgaagc cgacacgcac gtacaagcca
    12121 ccgtttccca ggcgttgaaa aaaggcgatg tacaaatcgc tatctcttac agcggtagta
    12181 aaaaagagat tgtcttgtgc gtagaagcgg cacgaaagca gggggcaacg gtgattgcca
    12241 ttacttctct ggctgactct ccgctgcggc ggctggcgca tttcacgctc gataccgttt
    12301 ccggtgaaac cgaatggcgt agctcgtcga tgtctacccg cacggcgcaa aattctgtta
    12361 ccgatttact gtttgttggt cttgtgcaac tcaatgatgt ggcgtcattg aaaatgattc
    12421 agcgcagcag tgagctaaca caacgcctga aatgatgcat aaagcagcga ctggattgag
    12481 attttcctga attagtgagc tgatccgcag caatattttg tttatcctgt attttcagag
    12541 ggaatggagt gtaacgctct gtattaacaa ggagagcatt aaaatgggta aactcacggg
    12601 caagacagca ctgattacgg gcgcattgca gggaattggc gaaggaattg ccagaacttt
    12661 tgcacgtcat ggcgcgaacc taatcttgct ggatatctcc cctgagatcg aaaagctggc
    12721 ggacgaactg tgtggtcgtg gtcatcgctg tacggcggtt gtcgccgatg tgcgtgaccc
    12781 ggcgtcggta gccgcagcta tcaaacgcgc gaaggaaaaa gaagggcgca ttgatatcct
    12841 ggtgaataac gcaggcgttt gtcgtctggg cagtttcctc gatatgagcg atgacgatcg
    12901 cgatttccat attgatatca atattaaagg cgtatggaac gtcacgaagg cggtgctgcc
    12961 ggagatgatt gcgcgcaaag atggtcgcat tgtgatgatg tcttcagtca ctggtgatat
    13021 ggtggccgat cctggcgaaa cggcgtacgc cttaacgaaa gcggcgattg ttggcctgac
    13081 aaaatcgctg gcggtggagt acgcgcagtc tggtattcgc gttaacgcca tttgcccggg
    13141 atacgtgcgc acaccaatgg cggaaagcat tgcccgccag tcgaacccgg aagatccaga
    13201 gtcggtgctg actgaaatgg cgaaagcaat cccgatgcgt cgcctcgccg atccgctgga
    13261 agtcggcgaa ctggcggcct tcctcgcatc ggatgaatcc agctatttaa ccggtacaca
    13321 gaatgtgatt gatggcggca gcacactgcc ggagacggtt agcgtcggta tctgattcac
    13381 ctctgtttcc tccctgcatg tgtggggagg atttcgtctt gaactaagtt caccaggcta
    13441 ttttatttgt cattttggcc ccgggcagtg ctcgaaatac tcacgtacta tgtgtacgct
    13501 ccggtttctc cgcgctgtcc gtgtccaaac tgcccgcaac aattacgcct gttgaaccaa
    13561 gttcttattc cctttttaac ttccaaatca ccaaacggta tataaaaccg ttactccttt
    13621 cacgtccgtt ataaatatga tggctattag aaagtcatta aatttataag ggtgcgcaat
    13681 ggccgttaac ttactgaaaa agaactcact cgcgctggtc gcttctctgc tgctggcggg
    13741 ccatgtacag gcaacggaac tgctgaacag ttcttatgac gtctcccgcg agctgtttgc
    13801 cgccctgaat ccgccgtttg aacagcaatg ggcaaaagat aacggcggcg acaaactgac
    13861 gataaaacaa tctcatgccg ggtcatcaaa acaggcgctg gcaattttgc agggcttaaa
    13921 aaccgacgtt gtcacttata accaggtgac cgacgtacaa attctgcacg acaaaggcaa
    13981 gctgatcccg gctgactggc agtcgcgcct gccgaataat agctcgccgt tctactccac
    14041 catgggcttc ctggtgcgta agggcaaccc gaagaatatc cacgactgga acgacctggt
    14101 gcgctccgac gtgaagctga ttttcccgaa cccgaaaacg tcgggtaacg cgcgttatac
    14161 ctatctggcg gcatggggcg cagcggataa agctgacggt ggcgacaaag ccaaaaccga
    14221 acagtttatg acccagttcc tgaaaaacgt tgaagtgttc gatactggcg gtcgtggcgc
    14281 gaccaccact tttgccgagc gcggcctggg cgatgtactg atcagcttcg agtcggaagt
    14341 gaacaacatc cgtaaacagt atgaagcgca aggctttgaa gtggtgattc cgaaaaccaa
    14401 cattctggcg gaattcccgg tggcgtgggt cgataaaaac gtgcaggcca acggtacgga
    14461 aaaagcagca aaagcctacc tgaactggct ctacagcccg caggcgcaga ccatcatcac
    14521 cgactattac taccgcgtaa ataacccgga agtcatggac aaactgaaag ataaattccc
    14581 gcagaccgag ctgttccgcg tggaagacaa atttggctcc tggccggaag tgatgaaaac
    14641 ccacttcacc agcggcggcg agttagacaa gctgttagcg gcggggcgta actgatgttt
    14701 gcagtttcat caagacgcgt gctgccgggc tttaccttaa gcctcggcac cagtctgctg
    14761 tttgtgtgcc tgattttgct gctgccgctc tccgcgctgg tgatgcagct ggctcagatg
    14821 agctgggcgc agtactggga ggtgatcacc aacccacaag tggtcgcggc ctacaaagtg
    14881 acgctgctgt cggcgtttgt ggcatcgatt tttaacggcg ttttcggtct gctgatggcg
    14941 tggattttaa cacgttatcg ctttccgggc cgcacgctgc ttgatgcgct gatggattta
    15001 ccctttgcgc tgccaacggc agtcgccggt ttaacgctgg cctcgctctt ttccgtaaac
    15061 ggtttttacg gtgaatggct ggcgaagttt gatatcaaag tcacctatac ctggcttggt
    15121 attgcggtgg cgatggcctt taccagcatt ccgtttgtgg tgcgtaccgt gcagccggtg
    15181 ctggaagagt taggcccaga atatgaagaa gcggcggaaa cgcttggtgc aacgcgctgg
    15241 cagagtttct gcaaagtggt gctgccggaa ctttctccag cgctggtggc gggcgtggcg
    15301 ttgtcgttta cccgtagtct tggtgagttt ggcgcggtga tatttatcgc cgggaacatc
    15361 gcttggaaga cggaagtgac gtcgctgatg atttttgtgc gcttgcagga gtttgattac
    15421 ccggcggcga gcgcgattgc ttcggtgatc ctcgcggcat ccctgctgct gctgttctca
    15481 attaacactc tgcaaagtcg ctttggtcgg cgtgtggtag gtcattaatg gcggaagtta
    15541 cccaattgaa gcgttatgac gcgcgcccga ttaactgggg caaatggttt ctgattggca
    15601 tcgggatgct ggtatcggcg ttcatcctgc tggtgccgat gatttatatc ttcgtacagg
    15661 cgttcagcaa agggctgatg ccggttttac agaatctggc cgatccggac atgctgcacg
    15721 ccatttggct gacggtgatg attgcgctga ttgccgtacc ggtgaacctg gtgttcggca
    15781 ttctgctggc gtggctggta acgcgcttta acttccccgg acgccagtta ctgctgacgc
    15841 tactggacat tccgtttgcc gtatcgccgg tagttgccgg tctggtgtat ctgctgttct
    15901 acggctctaa cggtccgctg ggcggctggc tggatgaaca taatttgcag attatgttct
    15961 cctggccggg aatggtgctg gtcaccatct ttgtgacctg tccttttgtg gtgcgcgagc
    16021 tggtgccggt gatgttaagc cagggcagcc aggaagacga agcggcgatt ttgcttggcg
    16081 cgtctggctg gcagatgttc cgtcgcgtca cattgccgaa cattcgctgg gcgctgctgt
    16141 atggtgtggt gctaaccaac gcccgcgcga ttggcgagtt tggtgcggtg tcggtggttt
    16201 ccggctcgat tcgcggcgaa acactttcgc tgccgttaca gattgaattg ctggagcagg
    16261 actacaacac cgtcggctcc tttaccgccg ccgcgctgtt gacgctgatg gcgattatca
    16321 ccctgttttt aaagagtatg ttgcagtggc gtctggagaa tcaggaaaaa cgcgcgcagc
    16381 aggaggagca tcatgagcat tgagattgcc aatattaaga agtcgtttgg tcgcacccag
    16441 gtgctgaacg atatctcact ggatattcct tctggtcaga tggtcgcgct gctggggccg
    16501 tccggttccg gaaaaaccac gctgctgcgc attattgccg ggctggagca tcaaaccagc
    16561 gggcatattc gcttccacgg taccgacgtg agccgcctgc acgcacgcga tcgtaaagtc
    16621 ggtttcgtgt tccagcatta cgcgctgttc cgtcatatga cggtgttcga caatatcgct
    16681 tttggcctga cggtgctgcc acgtcgcgag cgcccgaatg ccgcagccat caaagcgaaa
    16741 gtgacaaaat tgctggagat ggtccagctt gcgcatctgg cggatcgtta tccggcacag
    16801 ctttccggcg gccagaaaca gcgcgtggcg ctggcgcgcg cgctggctgt tgaaccgcaa
    16861 attctcctgc ttgatgaacc gtttggcgcg ctggatgcgc aggtgcgtaa agagctgcgt
    16921 cgctggctgc gtcaactgca tgaagagctg aaattcacca gcgtgttcgt gacccacgac
    16981 caggaagaag cgaccgaagt agctgatcgt gtagtggtga tgagccaggg caatatcgag
    17041 caggctgatg cgccggacca ggtatggcgc gaaccagcga cccgatttgt gctcgaattt
    17101 atgggcgaag tgaaccgcct gcagggaacc attcgcggcg ggcagttcca tgttggcgca
    17161 catcgctggc cgctggggta tacgcctgcg tatcaggggc cggtggatct cttcctgcgc
    17221 ccgtgggaag tggatatcag ccgccgtacc agtctcgatt cgccgctgcc ggtacaggta
    17281 ctggaagcca gcccgaaagg tcactacacc caattagtgg tgcagccgct ggggtggtac
    17341 aacgaaccgc tgacggtcgt gatgcatggc gacgatgccc cgcagcgtgg cgagcgttta
    17401 ttcgttggtc tgcaacatgc gcggctgtat aacggcgacg agcgtatcga aacccgagat
    17461 gaggaacttg ctctcgcaca aagcgcctga taggttgagt gaatgttaaa cgcccggagg
    17521 cgcttcccgc gatccgggct ttttaatggc aaggtttgta acctgtagac ctgataagac
    17581 gcgcaagcgt cgcatcaggc aacaccacgt atggatagag atcgtgagta cattagaaca
    17641 aacaataggc aatacgcctc tgataaagtt gcagcgaatg gggccgaata acggcagtga
    17701 agtctggttg aaactggaag gcaataaccc ggcaggttcg gtgaaagatc gtgcggcact
    17761 ttcgatgatc gtcgaggcgg aaaagcgcgg ggaaattaaa ccgggtgatg tgttaatcga
    17821 agccaccagt ggtaacaccg gcattgcgct ggcaatgatt gccgcgctta aaggctatcg
    17881 catgaaattg ctgatgcccg acaacatgag ccaggaacgc cgtgcggcga tgcgtgctta
    17941 tggtgcggaa ctgattcttg tcaccaaaga gcagggcatg gaaggtgcgc gcgatctggc
    18001 gctggagatg gcgaatcgtg gcgaaggaaa gctgctcgat cagttcaata atcccgataa
    18061 cccttacgcc cattacacca ctaccgggcc ggaaatctgg cagcaaaccg gcgggcgcat
    18121 tacccatttt gtctccagca tgggaacaac cggcactatc accggcgttt cacgctttat
    18181 gcgcgaacaa tccaaaccgg tgaccattgt cggcctgcag ccggaagaag gcagcagtat
    18241 tcccggcatt cgccgctggc ctgcggaata tctgccgggg attttcaacg cttctctggt
    18301 ggatgaggtg ctggatattc atcagcgcga tgcggaaaac accatgcgcg aactggcggt
    18361 gcgggaagga atattctgtg gcgtcagctc aggcggcgcg gttgctggag cactgcgggt
    18421 ggcaaaagct aaccctggtg cggtggtggt agcgatcatc tgcgatcgtg gcgatcgcta
    18481 cctctccacc ggagtgtttg gggaagagca ttttagccag ggggcgggga tttaagatta
    18541 ttgcgcaggc accgttttat ccgtctgcgc aattagcgca tgtaaaaaag gctgtgcgtt
    18601 ctcatcgctc ttaccgggga tcttcacaat atacggcttc ccggtaatcg atgacgacga
    18661 agcaacctta tcaataaact gctcggcagt gtcaatgcgg ttacgggtat tgccgagctt
    18721 cagacgcaga tgagaaaccg cttcatcgca ggtatgttca tcaccgttgc gcacaaatat
    18781 caaatccttt ttctgtgata atccctccag catggcgttg atgcgggctt cttcatgggc
    18841 agttaacttc gcgtaagcgg ggagtgtcat tagtagtgta atgaccagac aaatgatttt
    18901 cttcattgaa ttaccttatc cttgttttgt aatagccgat ttgactgcca gaatcaggta
    18961 aagtttcggt tggaatacga tgaggatcat cggcaaggag aaaaaattaa atgagtagtt
    19021 tgttgttgtt taacgataag agcagggcgc tgcaggcgga tatcgtcgcc gtgcagtcgc
    19081 aggtggttta cggcagcgtg ggcaacagca ttgccgtgcc tgctatcaaa cagaacggtc
    19141 tgaatgtttt tgccgtgccg acggtattgc tgagcaatac gccgcattat gacactttct
    19201 acggtggtgc gattccggat gaatggttta gcggttattt gcgtgcgctt caggagcgtg
    19261 atgcgctgcg ccagctgcgc gctgtaacca cgggctatat gggaacggca tcgcaaatca
    19321 aaatccttgc cgagtggctg actgcgctac gcaaagacca tcctgaccta ttgatcatgg
    19381 tcgatccggt gattggcgat attgatagcg gaatttatgt caaacctgac cttcccgagg
    19441 cgtatcgaca atatttactg ccgctggcgc agggaattac ccccaatatc tttgagctgg
    19501 aaatcctgac cggtaaaaat tgccgcgatc tcgacagtgc cattgctgcc gcaaaaagtc
    19561 tgctttcaga cacattaaaa tgggtggtga ttaccagcgc ctccggtaat gaagaaaatc
    19621 aggagatgca ggtggtggtg gtcagtgccg acagcgtgaa tgtcatttcc cattcacggg
    19681 taaaaaccga cctgaaaggg actggcgacc tgttttgtgc tcagcttatc agtggtttgc
    19741 tgaaagggaa ggcgttaaac gatgcggtgc accgtgcggg gttgcgcgta ctggaagtga
    19801 tgcgctacac ccagcagcat gagagcgatg aattgatttt gccgccgctg gcggaagcat
    19861 aaaaaatggc gccgatgg
//
LOCUS       DADMJE010000068        19773 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.069, whole genome shotgun sequence.
ACCESSION   DADMJE010000068 DADMJE010000000
VERSION     DADMJE010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19773)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19773)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19773
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.069"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            49..993
                     /locus_tag="JN001_002181"
     CDS             49..993
                     /locus_tag="JN001_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000261200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY9053406.1"
                     /translation="MVVMIHTTTWYVTNAHSVSPVTWDIANVLNSASRVSVPLFFMIS
                     GYLFFGERSAQPRHFLRIGLCLIFYSAIALLYIALFTSINMELALKNLLQKPVFYHLW
                     FFFAIAVIYLVSPLIQVKNVGGKMLLVLMAVIGIIANPNTVPQKIDGFEWLPINLYIN
                     GDTFYYILYGMLGRAIGMMDTQHKALSWVSAALFATGVFIISRGTLYELQWRGNFADT
                     WYLYCGPMVFICAIALLTLVKNTLDTRTIRGLGLISRHSLGIYGFHALIIHALRTRGI
                     ELKNWPILDIIWIFCATLAASLLLSMLVQRIDRNRLVS"
     gene            complement(1035..1472)
                     /locus_tag="JN001_002182"
     CDS             complement(1035..1472)
                     /locus_tag="JN001_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiaB family inner membrane protein"
                     /protein_id="HAY9053407.1"
                     /translation="MDNKISTYSPAFSIVSWIALVGGIVTYLLGLWNAEMQLNEKGYY
                     FAVLVLGLFSAASYQKTVRDKYEGIPTTSIYYMTCLTVFIISVALLMVGLWNATLLLS
                     EKGFYGLAFFLSLFGAVAVQKNIRDAGINPPKETQVTQEEYSE"
     gene            complement(1518..1859)
                     /locus_tag="JN001_002183"
     CDS             complement(1518..1859)
                     /locus_tag="JN001_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709350.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053408.1"
                     /translation="MKTSKTVAKLLFVVGALVYLVGLWISCPLLSGKGYFLGVLMTAT
                     FGNYAYLRAEKLGQLDNFFTHICQLVALITIGLLFIGVLNAPINAYEMVIYPIAFFVC
                     LFGQMRLFRSV"
     gene            complement(2024..2215)
                     /locus_tag="JN001_002184"
     CDS             complement(2024..2215)
                     /locus_tag="JN001_002184"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053409.1"
                     /translation="MGPALGAARLAQIAANPEKSLIELLPQLPLEQSHLPDAQRYAAY
                     QPRRETFRRLYQQLLPLMA"
     gene            complement(2148..3467)
                     /gene="xylB"
                     /locus_tag="JN001_002185"
     CDS             complement(2148..3467)
                     /gene="xylB"
                     /locus_tag="JN001_002185"
                     /EC_number="2.7.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005054141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylulokinase"
                     /protein_id="HAY9053410.1"
                     /translation="MYIGIDLGTSGVKVILLNEQGEVVASQTEKLTVSRPHPLWSEQD
                     PEQWWQATDRAMKALGDQHSLQDVKALGIAGQMHGATLLDAQQRVLRPAILWNDGRCA
                     QECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPEIFRQIDKVLLPKDYLRLRM
                     TGEFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAK
                     AWGMATVPVVAGGGDNAVGVGMVDANQAMLSLGTSGVYFAVSEGFLSKPESAVHSFCH
                     ALPQRWHLMSVMLSAASCLDWVAKLTGLCNVPALIAAAQQADESAEPVWFLPYLSGER
                     TPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHACGIKPQSVTLIGG
                     GARSEYWRQMLADISGQQLDYRTGGCGASTGRSKAGADCGESREIAH"
     gene            complement(3584..4861)
                     /gene="xylA"
                     /locus_tag="JN001_002186"
     CDS             complement(3584..4861)
                     /gene="xylA"
                     /locus_tag="JN001_002186"
                     /EC_number="5.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose isomerase"
                     /protein_id="HAY9053411.1"
                     /translation="MQAYFDQLDRVRYEGSKSSNPLAFRHYNPDELVLGKRMEEHLRF
                     AACYWHTFCWNGADMFGVGAFNRPWQQPGEALALAKRKADVAFEFFHKLHVSFYCFHD
                     VDVSPEGASLKEYINNFAQMVDVLAAKQEESGVKLLWGTANCFTNPRYGAGAATNPDP
                     EVFSWAATQVVTAMEATHKLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMQMVVE
                     HKHKIGFQGTLLIEPKPQEPTKHQYDYDAATVYGFLKQFGLEKEIKLNIEANHATLAG
                     HSFHHEIATAIALGLFGSVDANRGDAQLGWDTDQFPNSVEENALVMYEILKAGGFTTG
                     GLNFDAKVRRQSTDKYDLFYGHIGAMDTMALALKIAARMIEDGELDKRIAQRYSGWNS
                     ELGQQILKGQMSLADLAKYAQEHNLSPVHQSGR"
     gene            5227..6198
                     /gene="xylF"
                     /locus_tag="JN001_002187"
     CDS             5227..6198
                     /gene="xylF"
                     /locus_tag="JN001_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9053412.1"
                     /translation="MKIKNILLTLCTSLLLTNVAAHAKEVKIGMAIDDLRLERWQKDR
                     DIFVKKAESLGAKVFVQSANGNGETQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEA
                     KQEGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQGNYFLMGGSPVDNN
                     AKLFRAGQMKVLKPYVDSGKIKVVGDQWVDGWLPENALTANNNKIDAVVASNDATAGG
                     AIQALSAQGLSGKVAISGQDADLAGIKRIAAGTQTMTVYKPITLLANTAAEIAVELGN
                     GQEPKADTSLNNGLKDVPSRLLTPIDVNKNNIKDTVIKDGFHKESEL"
     gene            6276..7817
                     /gene="xylG"
                     /locus_tag="JN001_002188"
     CDS             6276..7817
                     /gene="xylG"
                     /locus_tag="JN001_002188"
                     /EC_number="7.5.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-xylose ABC transporter ATP-binding protein"
                     /protein_id="HAY9053413.1"
                     /translation="MPYLLEMKNITKTFGSVKAIDNVSLRLNAGEIVSLCGENGSGKS
                     TLMKVLCGIYPHGSYEGEIIFAGEEIQASHIRDTERKGIAIIHQELALVKELTVLENI
                     FLGNEITHNGIMDYDLMTLRCQKLLAQVSLSISPDTRVGDLGLGQQQLVEIAKALNKQ
                     VRLLILDEPTASLTEQETSVLLDIIRDLQQHGIACIYISHKLNEVKAISDTICVIRDG
                     QHIGTRDAAGMSEDDIITMMVGRELTALYPNEPHTTGDEILRIEHLTAWHPVNRHIKR
                     VNDVSFSLKRGEILGIAGLVGAGRTETIQCLFGVWPGQWEGKIYIDGKQVDIRNCQQA
                     IAQGIAMVPEDRKRDGIVPVMAVGKNITLAALNKFTGGISQLDDAAEQKCILESIQQL
                     KVKTSSPDLAIGRLSGGNQQKAILARCLLLNPRILILDEPTRGIDIGAKYEIYKLINQ
                     LVQQGIAVIVISSELPEVLGLSDRVLVMHEGKLKANLINHNLTQEQVMEAALRSEHHV
                     EKQSV"
     gene            7795..8976
                     /gene="xylH"
                     /locus_tag="JN001_002189"
     CDS             7795..8976
                     /gene="xylH"
                     /locus_tag="JN001_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xylose ABC transporter permease XylH"
                     /protein_id="HAY9053414.1"
                     /translation="MSKSNPSEVKLAVPTSGGFSGLKSLNLQVFVMIAAIIAIMLFFT
                     WTTDGAYLSARNVSNLLRQTAITGILAVGMVFVIISAEIDLSVGSMMGLLGGVAAICD
                     VWLGWPLPLTIIVTLVLGLLLGAWNGWWVAYRKVPSFIVTLAGMLAFRGILIGITNGT
                     TVSPTSAAMSQIGQSYLPASTGFIIGALGLMAFVGWQWRGRMRRQALGLQSPASTAVV
                     GRQALTAIIVLGAIWLLNDYRGVPTPVLLLTLLLLGGMFMATRTAFGRRIYAIGGNLE
                     AARLSGINVERTKLAVFAINGLMVAIAGLILSSRLGAGSPSAGNIAELDAIAACVIGG
                     TSLAGGVGSVAGAVMGAFIMASLDNGMSMMDVPTFWQYIVKGAILLLAVWMDSATKRR
                     S"
     gene            9054..10232
                     /locus_tag="JN001_002190"
     CDS             9054..10232
                     /locus_tag="JN001_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XylR family transcriptional regulator"
                     /protein_id="HAY9053415.1"
                     /translation="MFTKRHRITLLFNANKAYDRQVVEGVGEYLQASQSEWDIFIEED
                     FRARIDKIKDWLGDGVIADFDDKQIEQALADVDVPIVGVGGSYHLAESYPPVHYIATD
                     NYALVESAFLHLKEKGVNRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGL
                     ETAPENWQHAQNRLADWLQTLPPQTGIIAVTDARARHILQVCEHLHIPVPEKLCVIGI
                     DNEELTRYLSRVALSSVAQGARQMGYQAAKLLHRLLDKEEMPLQRILVPPVRVIERRS
                     TDYRSLTDPAVIQAMHYIRNHACKGIKVDQVLDAVGISRSNLEKRFKEEVGETIHAMI
                     HAEKLEKARSLLISTTLSINEISQMCGYPSLQYFYSVFKKAYDTTPKEYRDVNREVML
                     "
     gene            complement(10340..11164)
                     /locus_tag="JN001_002191"
     CDS             complement(10340..11164)
                     /locus_tag="JN001_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein bax"
                     /protein_id="HAY9053416.1"
                     /translation="MILTPIRRYGAMILMLLTLVFSSEVLAKTHTTTASQKSHLTKAS
                     NKQVSSKQEYSRNSAKSSSLPDLRKYPSGTPRKKAFLRTVMPYITSQNAAITAERNWL
                     ISKQYQGQWSPAERARLKDIAKRYKVKWSGNTRKIPWNTLLERVDIIPTSMVATMAAA
                     ESGWGTSKLARNNNNLFGMKCMKGRCTNAPGKVKGYSQFSSVKESVSAYVTNLNTHPA
                     YSSFRKSRAQLRKADQEVTATAMIHKLKGYSTKGKSYNNYLFAMYQDNQRLIAAHM"
     gene            11484..13514
                     /gene="malS"
                     /locus_tag="JN001_002192"
     CDS             11484..13514
                     /gene="malS"
                     /locus_tag="JN001_002192"
                     /EC_number="3.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY9053417.1"
                     /translation="MKLASCFLTLLPGFAVAASWTSPGFPAFSEQGTGTFVSHAQLPK
                     GTRPLTLNFDQQCWQPADAIKLNQMLSLQPCSNTPPQWRLFRDGKYTLQIDTRSGTPT
                     LMISIQNAAEPVANLVRECPKWDGLPLTLDVSATFPEGAAVRDYYSQQIAIVKNGQIT
                     LQPAATSNGLLLLERAETDTSAPFDWHNATVYFVLTDRFENGDPSNDQSYGRHKDGMA
                     EIGTFHGGDLRGLINKLDYLQQLGVNALWISAPFEQIHGWVGGGTKGDFPHYAYHGYY
                     TQDWTNLDANMGNEADLRTLVDSAHQRGIRILFDVVMNHTGYATLADMQEYQFGALYL
                     SGDEVKKTLGERWSDWKPAAGQTWHSFNDYINFSDKTGWDKWWGKNWIRTDIGDYDNP
                     GFDDLTMSLAFLPDIKTESTTASGLPVFYKNKTDTHAKVIEGFTPRDYLTHWLSQWVR
                     DYGIDGFRVDTAKHVELPAWQQLKTEASSALREWKKTNPDKALDDKPFWMTGEAWGHG
                     VMQSDYYRHGFDAMINFDYQEQAAKAVDCLAQMDTTWQQMAEKLQGFNVLSYLSSHDT
                     RLFREGGDKAAELLLLAPGAVQIFYGDESSRPFGPTGSDPLQGTRSDMNWQDVSGKSA
                     ANVAHWQKISQFRARHPAIGAGKQTTLSLKQGYGFVREHGDDKVLVIWAGQQ"
     gene            13692..14945
                     /gene="avtA"
                     /locus_tag="JN001_002193"
     CDS             13692..14945
                     /gene="avtA"
                     /locus_tag="JN001_002193"
                     /EC_number="2.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--pyruvate transaminase"
                     /protein_id="HAY9053418.1"
                     /translation="MTFSLFGDKFTRHSGITLLMEDLNDGLRTPGAIMLGGGNPAQIP
                     EMQDYFQTLLTDMLESGKATDALCNYDGPQGKTELLTLLAGMLREKLGWDIEPQNIAL
                     TNGSQSAFFYLFNLFAGRRADGRVKKVLFPLAPEYIGYADAGLEEDLFVSARPNIELL
                     PEGQFKYHVDFEHLHIGEETGMICVSRPTNPTGNVITDEELLKLDALANQHGIPLVID
                     NAYGVPFPGIIFSEARPLWNPNIVLCMSLSKLGLPGSRCGIIIANEKIITAITNMNGI
                     ISLAPGGIGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQETIAIIRRYLPENRCLIHK
                     PEGAIFLWLWFKDLPITTEQLYQRLKARGVLMVPGHNVFPGLDKPWPHTHQCMRMNYV
                     PEPEKIEAGVKILAEEIERAWAESH"
     gene            complement(15096..15569)
                     /locus_tag="JN001_002194"
     CDS             complement(15096..15569)
                     /locus_tag="JN001_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HAY9053419.1"
                     /translation="MNRFIIADATKCIGCRTCEVACAVSHQENQDCAALSPDEFISRI
                     RVIKDHSWTTAVACHQCEDAPCANVCPVDAISREHGHIFVEQTRCIGCKSCMLACPFG
                     AMEVVSSRKKARAIKCDLCWHRETGPACVEACPTKALQCMDVEKVQRHRLRQQPV"
     gene            complement(15671..16519)
                     /gene="yiaJ"
                     /locus_tag="JN001_002195"
     CDS             complement(15671..16519)
                     /gene="yiaJ"
                     /locus_tag="JN001_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator YiaJ"
                     /protein_id="HAY9053420.1"
                     /translation="MGKEVMGKKENEMAQEKERPAGSQSLFRGLMLIEILSNYPNGCP
                     LAHLSELAGLNKSTVHRLLQGLQSCGYVTTAPAAGSYRLTTKFIAVGQKALSSLNIIH
                     IAAPHLEALNIATGETINFSSREDDHAILIYKLEPTTGMLRTRAYIGQHMPLYCSAMG
                     KIYMAFGHPDYVKSYWENHQHEIQPLTRNTITELPAMFDELAHIRESGAAMDREENEL
                     GVSCIAVPVFDIHGRVPYAVSISLSTSRLKQVGEKNLLKPLRETAQAISNELGFTVRD
                     DLGAIT"
     gene            16720..17718
                     /gene="yiaK"
                     /locus_tag="JN001_002196"
     CDS             16720..17718
                     /gene="yiaK"
                     /locus_tag="JN001_002196"
                     /EC_number="1.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydro-L-gulonate 2-dehydrogenase"
                     /protein_id="HAY9053421.1"
                     /translation="MKVTFEQLKAAFNRALISRGVDSETADACAEMFARTTESGVYSH
                     GVNRFPRFIQQLENGDIIPDAQPKRITSLGAIEQWDAQRSIGNLTAKKMMDRAIELAA
                     DHGIGLVALRNANHWMRGGSYGWQAAEKGYIGICWTNSIAVMPPWGAKECRIGTNPLI
                     VAIPSTPITMVDMSMSMFSYGMLEVNRLAGRQLPVDGGFDDEGNLTKEPGVIEKNRRI
                     LPMGYWKGSGMSIVLDMIATLLSDGASVAEVTQDNSDEYGISQIFIAIEVDKLIDGPT
                     RDAKLQRIMDYVTTAERADENQAIRLPGHEFTTLLAENRRNGITVDDSVWAKIQAL"
     gene            17730..18198
                     /locus_tag="JN001_002197"
                     /pseudo
     CDS             17730..18198
                     /locus_tag="JN001_002197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418033.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF386 domain-containing protein"
     gene            18316..18789
                     /gene="yiaM"
                     /locus_tag="JN001_002198"
     CDS             18316..18789
                     /gene="yiaM"
                     /locus_tag="JN001_002198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diketo-L-gulonate TRAP transporter small
                     permease YiaM"
                     /protein_id="HAY9053422.1"
                     /translation="MKKILEVILAINLAVLSCIVFINIILRYGFQTSILSVDELSRYL
                     FVWLTFIGAIVAFMDNAHVQVTFLVEKLSPAWQRRVALVTHSLILFICGALAWGATLK
                     TIQDWSDYSPILGLPIGLMYAACLPTSLVIAFFELRHLYQLITRSNSLTSPPQGA"
     gene            18792..>19773
                     /locus_tag="JN001_002199"
     CDS             18792..>19773
                     /locus_tag="JN001_002199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter large permease subunit"
                     /protein_id="HAY9053423.1"
                     /translation="MAVLIFLGCLLGGIAIGLPIAWALLLCGAALMFWLDMFDVQIMA
                     QTLVNGADSFSLLAIPFFVLAGEIMNAGGLSKRIVDLPMKLVGHKPGGLGYVGVLAAM
                     IMASLSGSAVADTAAVAALLVPMMRSANYPVNRAAGLIASGGIIAPIIPPSIPFIIFG
                     VSSGLSISKLFMAGIAPDMMMGATLMLTWWWQASRLNLPRQQKATMQEIWHSFVSGIW
                     ALFLPVIIIGGFRSGLFTPTEAGAVAAFYALFVATVIYREMTFATLWHVLIGAAKTTS
                     VVMFLVASAQVSTWLITIAELPMMVSDLLQPLVDSPRLLFIVIMVAILIVG"
BASE COUNT         4989 a         4951 c         4804 g         5029 t
ORIGIN      
        1 cagcccaaaa tttactggat tgataacctg cgagggatag cgtgtttaat ggtggtgatg
       61 attcacacca ctacctggta tgtgaccaat gctcatagtg ttagccccgt cacatgggat
      121 atcgccaatg ttctgaattc tgcctctcgt gtcagcgtgc cgctattttt catgatttcc
      181 ggctatctct tttttggcga acgcagcgcc cagccgcgcc atttcttgcg tatcggctta
      241 tgtctgattt tttatagcgc aatcgcactg ctctacattg cgctgtttac ctccatcaat
      301 atggagttag cgctgaaaaa cctgctgcaa aagccagtgt tttaccactt gtggtttttc
      361 ttcgcgattg cggtgattta tctggtttca ccgctgattc aggtgaagaa cgtcggcgga
      421 aaaatgttgc tggtgctaat ggcggtgatt ggcattatcg ctaacccaaa cacagtgccg
      481 cagaaaattg acggttttga atggctgcca attaacttat atatcaatgg cgatactttt
      541 tactacattc tgtatggcat gttgggccgc gctataggga tgatggacac acagcataaa
      601 gcactgtcgt gggtgagcgc cgcgctgttt gcgacggggg tttttattat ctctcgcggg
      661 acattatatg aattgcagtg gcgcggaaat tttgccgata cctggtatct ttactgtggg
      721 ccgatggttt ttatctgcgc aatcgcgcta ttgactctgg ttaaaaacac gctggatacg
      781 cgtaccattc gcggacttgg cttaatctcc cgccattcat tgggtatata cggattccac
      841 gccttgatta tccatgcgct gcgcacccgg ggaattgagc ttaaaaattg gccaatactg
      901 gatattattt ggatcttttg cgcgacgttg gcagcgagtt tgttactttc tatgctggta
      961 caacgaatcg acagaaacag attagtgagt taagtaaaag cccgttcaca ttggactgac
     1021 cgggcttacg tgaattattc gctgtattct tcctgggtaa cctgtgtttc ttttggcggg
     1081 tttattccgg catcacgaat attcttctgc accgctactg caccaaacaa gcttaagaag
     1141 aaagccagtc cataaaaacc tttttcactg agtaataatg tcgcattcca cagacctacc
     1201 atcagtaatg caacagagat aataaagaca gtcaggcagg tcatataata aatggaagtg
     1261 gtcggtatgc cttcatactt gtcccgaacg gtcttttgat aagacgcagc agaaaacagt
     1321 cctaacacca gtacggcaaa ataataccct ttttcattta actgcatctc tgcattccat
     1381 agccctaaca gataggtaac gataccacca acgagagcta tccatgacac aatactaaag
     1441 gccggtgaat aggttgatat tttgttgtcc atcacagtat tcctttcatt cctgaatgtg
     1501 taagagcttt atgttgctca taccgagcga aacaaacgca tttgaccaaa caagcagaca
     1561 aaaaaggcga tggggtagat caccatttca taagcattga taggtgcatt taaaacaccg
     1621 ataaacaaga gaccgatagt gattaacgca actaactggc agatatgggt aaaaaaatta
     1681 tccagttgcc cgagtttttc tgcgcgaaga tatgcatagt taccaaaagt tgctgtcatt
     1741 aacacgccaa gaaaatagcc ttttccactt agcaatgggc atgagatcca tagcccaacc
     1801 agataaacca gcgccccgac aacaaataat agttttgcca cagtttttga ggttttcata
     1861 acgatctcca tatctaccag cgatacatta cgagtaacca acgaaagaca aaactgaaaa
     1921 atgccattaa caaatgattt tcagaataaa ttcatactaa atattaatta gtgagatata
     1981 tagatgtgaa ttatccccca cccggtcagg caggggataa cgtttacgcc attaatggca
     2041 gaagttgctg atagaggcga cggaacgttt cacgtcgtgg ctgataagcg gcataacgct
     2101 gcgcatctgg tagatgcgac tgttctaacg gtagctgcgg caacaactca atgagcgatt
     2161 tctctggatt cgccgcaatc tgcgccagcc ttgctgcgcc cagtgctggc cccacatccc
     2221 cccgtacggt aatcgagctg ctgaccgctg atatccgcca gcatctgacg ccagtactca
     2281 ctacgcgccc cgccaccaat caacgtaaca ctttgcggtt taatgccgca ggcatgcacg
     2341 acatccatgc catctgccag cgcataaccc acgccttcca gcactgctcg cgccagttca
     2401 ttggggccat gttgatgagt caaaccaaag aaaaccccct tcgcctgggg attattgtgt
     2461 ggtgtacgct cgccggaaag ataaggcaga aaccaaactg gctcggcact ttcatcagcc
     2521 tgttgagctg cagcgattaa agctgggaca ttgcacaggc cggttaattt cgcgacccaa
     2581 tccagacacg atgctgcact cagcattaca gacattaaat gccaacgctg cggtagcgca
     2641 tggcaaaagc tgtgtacagc gctttctggc ttgcttaaga acccttcgct gacagcaaaa
     2701 tagacccccg acgtccccag cgataacatt gcctgattag catcaaccat tcccacacca
     2761 actgcattgt cgccaccgcc tgcgacaact ggcaccgtcg ccatacccca cgctttcgca
     2821 acttcaggta acaaagcacc agtaatttcg ctgccttcgt ataatgcggg catctggtca
     2881 cgagataagt cgcaagcctg cagcatgacg tcactccagt cacgctttgc gacatccagc
     2941 cacatggtgc cagctgcgtc agacatatcg ctggcaaact cccccgtcat acgcagacgc
     3001 aagtaatctt tcggtaataa tactttgtcg atttgacgga atatctccgg ctcatgccgc
     3061 tgaacccata gcaatttagg cgcagtaaat ccgggcatca tcaggttgcc ggtaatcact
     3121 cgtgattgcg gaactctcgc ttccagcaaa gtgcactctt gcgcacagcg cccgtcgttc
     3181 cacaaaatgg cagggcgcaa tacccgttgt tgagcatcca gtaaggttgc tccatgcatc
     3241 tggccggcaa tacccaatgc tttaacgtcc tgcagagaat gctgatcgcc cagagctttc
     3301 attgcgcgat cagttgcctg ccaccactgt tccgggtctt gttccgacca gagtggatgc
     3361 gggcgcgaaa cggtcagctt ttccgtttgc gaagcaacca cctcaccctg ctcgttgagc
     3421 aaaataactt ttacgcccga ggtgccaaga tctatcccga tatacatatc gatcgttcct
     3481 taaaaaaatg cccggtatcg ctaccgataa ccgggccaac ggactgcaca gttagccgtt
     3541 atttgtcgaa cagataatga tttaccagat tttccagttg ctcctagcga ccactctgat
     3601 gcaccggaga caaattatgt tcctgagcat atttggctaa atctgccagt gacatttggc
     3661 ctttcaggat ttgctggccc aattcgctat tccagccgga ataacgctgc gcgatgcgtt
     3721 tatccagctc gccatcttca atcatgcgcg ctgcaatttt cagcgccagt gccatcgtat
     3781 ccatcgcgcc gatatgaccg taaaacagat catatttatc agtactttga cgacgtactt
     3841 tggcatcgaa gttcagacca ccggtggtga aaccgcctgc tttgagaatt tcatacatca
     3901 ccagcgcatt ctcttccaca ctgttcggga actggtcggt gtcccagccc agttgcgcat
     3961 cgccacggtt ggcgtcgaca gaaccgaaca ggccaagcgc aatggcggtg gctatttcat
     4021 gatggaaaga gtgacctgcc agcgtcgcgt ggttagcttc aatgttcagt ttaatctctt
     4081 tttccagacc aaactgtttc aggaagccat agaccgtcgc ggcatcgtaa tcatattgat
     4141 gtttagtcgg ttcttgcggt ttcggttcga taagcaacgt gccctggaag ccgattttat
     4201 gtttatgctc aaccaccatc tgcataaagc ggcccagttg ttcacgctcc tgacgcaagt
     4261 cggtatttaa cagcgtttcg taaccttcac gaccacccca caggacatag ttttcaccgc
     4321 ccaatttatg ggttgcttcc atcgctgtaa caacttgcgt tgccgcccag ctgaagactt
     4381 caggatctgg gttcgtcgcc gcacccgcgc catagcgagg gtttgtaaag cagttagcgg
     4441 ttccccacag cagcttcacg ccgctctctt cttgcttggc tgccaggaca tcaaccattt
     4501 gcgcaaaatt attgatgtac tcttttaacg acgcgccctc aggggaaaca tccacatcgt
     4561 ggaagcaata aaatgacaca tgtaacttgt ggaaaaactc aaatgcgaca tctgctttac
     4621 gcttcgccaa cgccagtgcc tcaccaggct gctgccacgg acgattaaac gcccccacac
     4681 caaacatgtc cgccccgttc cagcagaagg tgtgccagta acaggcggca aaacgcaagt
     4741 gctcttccat acgcttaccc aacaccagtt cgtcgggatt gtagtgacgg aatgctaacg
     4801 ggtttgagga ttttgagcct tcataacgaa cgcgatcgag ctggtcaaaa taggcttgca
     4861 tattgaactc cataatcagg taatgccgcg ggtgatggat gatgtcgtaa tattgggcac
     4921 tccctttcag ttgctcaatt atgttatttc acactgctat tgagataatt cacaagtgtg
     4981 cgctcgctcg caaaataaaa tgggatgatg aaactgggta attcctcgaa gataaaaatg
     5041 caataagtac aattgcgcaa caaaagtaag atctcggtca taaatcaaga aataaaccaa
     5101 aaatcgtaat cgaaagataa aaatctgtaa ttgttttccc ctgtttagtt gctaaaaatt
     5161 ggttacgttt atcgcggtga ttgttactta ttaaagctgt cctctaacta cagaaggccc
     5221 tacaccatga aaataaagaa cattctactc accctttgca cctcacttct gcttaccaac
     5281 gttgcggcac acgccaaaga agtcaaaata ggtatggcga ttgatgatct acgtcttgaa
     5341 cgctggcaaa aagatcgaga tatttttgtg aaaaaggctg aatctctcgg tgcgaaagta
     5401 tttgtacagt ctgcaaatgg caatggagaa acacaaatgt cgcagattga aaacatgatt
     5461 aaccggggtg tcgatgttct tgtcattatt ccgtataacg gccaggtatt aagtaacgtt
     5521 gtaaaagaag ccaaacaaga aggtattaaa gtattagctt acgaccgtat gattaacgat
     5581 gcggatatcg atttttatat ttctttcgat aacgaaaaag tcggtgaact gcaggcaaaa
     5641 gccctggtcg atattgttcc gcaaggtaat tacttcctga tgggcggctc gccggtagat
     5701 aacaacgcca agctgttccg cgccggacaa atgaaagtgt taaaacctta cgttgattcc
     5761 ggaaaaatta aagtcgttgg tgaccaatgg gttgatggct ggttaccgga aaacgcgcta
     5821 accgccaata ataacaaaat tgatgctgta gttgcctcaa acgatgccac cgcaggtggg
     5881 gcaattcagg cattaagcgc gcaaggttta tcagggaaag tagcaatttc cggccaggat
     5941 gcggatctcg caggtattaa acgtattgct gccggtacgc aaactatgac ggtgtataaa
     6001 cctattacat tgctggcaaa tactgccgca gaaattgccg ttgaattggg caatggtcag
     6061 gagccaaaag cagatacctc actgaataat ggcctgaaag atgtcccctc ccgcctcctg
     6121 acaccgatcg atgtgaataa aaacaacatc aaagatacgg taattaaaga cggattccac
     6181 aaagagagcg agctgtaagc gttacgcccc ggcgcggagc gggggcgtga tttctctcca
     6241 tgccgcgtga atgaattggc ttaggtggag tcgttatgcc ttatctactt gaaatgaaga
     6301 acattaccaa aaccttcggc agtgtgaagg cgattgataa cgtcagcttg cggttgaatg
     6361 ctggcgaaat cgtctcactc tgtggggaaa atgggtctgg taaatcaacg ctgatgaaag
     6421 tgctgtgtgg tatttatccc catggctcct acgaaggcga aattattttt gcgggagaag
     6481 agattcaggc gagtcacatc cgcgataccg aacgcaaagg tatcgccatc attcaccagg
     6541 aattggccct ggtgaaagaa ttgaccgtgc tggaaaatat cttcctgggt aacgaaataa
     6601 cccacaatgg cattatggat tatgacctga tgacgctacg ctgtcagaag ctgctcgcac
     6661 aggtcagttt atccatttca cctgataccc gcgttggcga tttagggctt gggcaacaac
     6721 aactggttga aattgccaag gcacttaata aacaggtgcg cttgttaatt ctcgatgaac
     6781 cgacagcctc attaactgag caggaaacgt cggttttact ggatattatt cgcgatctac
     6841 aacagcacgg tatcgcctgt atttatattt cgcacaaact caacgaagtc aaagcgattt
     6901 ccgatacgat ttgcgttatt cgcgacggtc agcacattgg tacgcgtgat gctgccggaa
     6961 tgagtgaaga cgatattatc accatgatgg tcgggcgaga gttaaccgcg ctttacccta
     7021 atgaaccaca taccaccgga gatgaaatat tacgtattga acatctgacg gcatggcatc
     7081 cggttaatcg tcatattaaa cgagttaatg atgtctcgtt ttccctgaaa cgtggcgaaa
     7141 tactgggtat tgccggactc gttggtgccg gacgtaccga gaccattcag tgcctgtttg
     7201 gcgtgtggcc cggacaatgg gaaggaaaaa tttatattga tggcaaacag gtagatattc
     7261 gtaactgtca gcaagccatc gcccagggga ttgcgatggt acccgaagac agaaagcgcg
     7321 acggcatcgt tccggtaatg gcggttggta aaaatattac cctcgccgca ctcaataaat
     7381 ttaccggtgg cattagccag cttgatgacg cggcagagca aaaatgtatt ctggaatcaa
     7441 tccagcaact caaagttaaa acgtcgtccc ccgatcttgc tattggacgt ttgagcggcg
     7501 gcaatcagca aaaagcgatc ctcgcccgct gtctgttact caacccgcgc attctcattc
     7561 ttgatgaacc taccaggggt attgatattg gcgcgaaata tgagatctac aaattaatta
     7621 accaactcgt ccagcagggt attgccgtta ttgtcatctc ttccgaatta cctgaagtgc
     7681 tcggccttag cgatcgtgta ctggtgatgc atgaagggaa actaaaagcc aacctgataa
     7741 atcataacct gactcaggag caggtgatgg aagccgcatt gaggagcgaa catcatgtcg
     7801 aaaagcaatc cgtctgaagt gaaattggcc gtaccgacat ccggtggctt ttccgggctg
     7861 aaatcactga atttgcaggt cttcgtgatg attgcagcta tcatcgcaat catgctgttc
     7921 tttacctgga ccaccgatgg tgcctactta agcgcccgta acgtctccaa cctgttacgc
     7981 cagaccgcga ttaccggcat cctcgcggta ggaatggtgt tcgtcataat ttctgctgaa
     8041 atcgaccttt ccgtcggctc aatgatgggg ctattaggtg gcgtcgcggc gatttgtgac
     8101 gtctggttag gctggccttt gccacttacc atcattgtga cgttggttct gggactgctt
     8161 ctcggtgcgt ggaacggatg gtgggtcgcg taccgtaaag tcccttcatt tattgtcacc
     8221 ctcgcgggca tgttggcatt tcgcggcata ctcattggca tcaccaacgg cacgactgta
     8281 tcccccacca gcgccgcgat gtcacaaatt gggcaaagct atctccccgc cagtaccggc
     8341 ttcatcattg gcgcgcttgg cttaatggct tttgttggtt ggcaatggcg cggaagaatg
     8401 cgccgtcagg ctttgggttt acagtctccg gcctctaccg cagtagtcgg tcgccaggct
     8461 ttaaccgcta tcatcgtatt aggcgcaatc tggctgttga atgattaccg tggcgttccc
     8521 actcctgttc tgctgctgac gttgctgtta ctcggcggaa tgtttatggc aacgcggacg
     8581 gcatttggac gacgcattta tgccatcggc ggcaatctgg aagcagcacg tctctccggg
     8641 attaacgttg aacgcaccaa acttgccgtg ttcgcgatta acggattaat ggtagccatc
     8701 gccggattaa tccttagttc tcgacttggc gctggttcac cttctgcggg aaatatcgcc
     8761 gaactggacg ctattgcagc atgcgtgatt ggcggcacca gcctggctgg cggtgtggga
     8821 agcgttgccg gagcagtaat gggggcattt atcatggctt cactggataa cggcatgagt
     8881 atgatggatg taccgacctt ctggcagtat atcgttaaag gtgcgattct gttgctggca
     8941 gtatggatgg actccgcaac caaacgccgt tcttgatttt gataaaaatt ttctcaaagc
     9001 cggttacgta ttaccggttt tgagtttttg catgattcag caggaaaaga accatgttta
     9061 ctaaacgtca ccgcatcaca ttactgttca atgccaataa agcctatgac cggcaggtag
     9121 tagaaggcgt aggggaatat ttacaggcgt cacaatcaga atgggatatt ttcattgaag
     9181 aagatttccg cgcccgcatt gataaaatca aggactggtt aggagatggc gtcattgccg
     9241 acttcgatga caaacaaatc gagcaagcgc tggctgatgt cgacgtcccc attgttgggg
     9301 ttggcggctc gtatcacctt gcagaaagtt acccacccgt tcattacatt gccaccgata
     9361 actatgcgct ggttgaaagc gcatttttgc atttaaaaga gaaaggcgtt aaccgctttg
     9421 ctttttatgg tcttccggaa tcaagcggca aacgttgggc cactgaacgc gaatatgcat
     9481 ttcgtcagct tgtcgccgaa gaaaagtatc gcggagtggt ttatcagggg ttagaaaccg
     9541 cgccagagaa ctggcaacac gcgcaaaatc ggctggcaga ctggctacaa acgctgccac
     9601 cgcaaaccgg gattattgcc gttactgacg cccgggcgcg gcatattctg caagtatgtg
     9661 aacatctaca cattcccgta ccggaaaaat tatgcgtgat tggcatcgac aacgaagaac
     9721 tgacccgcta tctgtcgcgt gtcgcccttt cttcggtcgc tcagggcgcg cggcaaatgg
     9781 gctatcaggc ggcaaaactg ttgcatcgat tattagataa agaagaaatg ccgctacagc
     9841 gaattttggt cccaccagtt cgcgtcattg aacggcgctc aacagattat cgctcgctga
     9901 ccgatcccgc cgttattcag gccatgcatt acattcgtaa tcacgcctgt aaagggatta
     9961 aagtggatca ggtactggat gcggtcggga tctcgcgctc caatcttgag aagcgtttta
    10021 aagaagaggt gggtgaaacc atccatgcca tgattcatgc cgagaagctg gagaaagcgc
    10081 gcagtctgct gatttcaacc accttgtcga tcaatgagat atcgcaaatg tgcggttatc
    10141 catcgctgca atatttctac tctgttttta aaaaagcata tgacacaacg ccaaaagagt
    10201 atcgcgatgt aaatcgcgag gtcatgttgt agcgatgatg agaattgtcg gcgtcacatc
    10261 agggaactca gcacagccac ctgatgcgag caaaagcctt atccgaccga caaatcagat
    10321 aaggctcaag gaaatgcaat tacatatgcg ccgcgattaa ccgttggtta tcctggtaca
    10381 ttgcgaacag gtagttatta taactcttcc ctttggtcga gtagcccttc agcttgtgaa
    10441 tcatcgctgt ggcagtcact tcctgatccg ctttacgcag ctgcgcacgc gatttacgga
    10501 acgaagagta agccgggtgc gtattcaggt tagtgacata ggcgctcacc gattctttga
    10561 cagaactaaa ctgtgagtac cctttcactt tacccggcgc attggtacaa cgtcctttca
    10621 tgcatttcat gccgaacaga ttgttattgt tgcgcgccag cttcgacgtt ccccaaccgc
    10681 tttctgctgc agccatcgtc gccaccatac tggtagggat aatgtctacg cgttcaagca
    10741 aggtattcca cgggattttt cgcgtattac cagaccactt caccttgtag cgtttggcga
    10801 tgtctttcag acgcgcacgc tcagcaggtg accattggcc ctgatactgt tttgaaatca
    10861 gccagttacg ttctgcagta atggctgcat tttggctggt aatgtaaggc attacggtcc
    10921 ggagaaacgc ctttttcctt ggtgttccgg aagggtattt tcgcaaatca ggaagtgaac
    10981 tactctttgc actattgcga gaatactctt gtttactgct tacctgttta ttactagctt
    11041 tagttaagtg ggacttttga ctcgctgttg ttgtgtgcgt cttcgctaac acctcactcg
    11101 aaaacaccag agtgagtaac ataagaatca tcgccccata tcgtcgtatg ggagtcaaaa
    11161 tcatcaggtc tcctggtcgg atttaatcat tccaacacct tatatttttc acaaatttga
    11221 gagttgaatc tcaaatcata tcaaaaatag ctgtcaagag caccccaagg aatagtccaa
    11281 atctgaaact atgtcacgag ttaacgattc agattggcgc taaatcgcag aaaatgtggg
    11341 gtttatcgca aaattcagcc gttttttgcg cgcgatcgct cacccttgct tctcatcctg
    11401 tggacttacc gctcagggat gagttttgtc tggcttatcg ctggcaaact gtctgaaatc
    11461 gcagcaataa ggactcatcc accatgaaac tcgcctcctg ttttctgaca ctccttcctg
    11521 gcttcgccgt tgccgccagc tggacttctc cggggttccc tgcctttagc gaacagggaa
    11581 cgggaacatt tgtcagccac gcgcagttgc ccaaaggtac gcgtccactc acgctaaatt
    11641 ttgaccaaca gtgctggcag cctgcagatg cgataaaact caatcagatg ctttccctgc
    11701 aaccttgtag caacacgccg cctcaatggc gattgttcag ggacggcaaa tatacgctgc
    11761 aaatagacac ccgctccggt acgccaacat tgatgatttc catccagaac gccgccgaac
    11821 cggtagcaaa cctggtccgt gaatgcccga aatgggatgg attaccgctc acgctggatg
    11881 tcagcgccac tttcccggaa ggagccgccg tacgggatta ttacagccag caaattgcga
    11941 tagtgaagaa cggtcaaata acgttacaac ccgctgctac cagcaacggt ttactcctgc
    12001 tggaacgggc agaaactgac acatccgccc ctttcgactg gcataacgcc acggtttact
    12061 ttgtgctgac agatcgtttc gaaaacggcg atcccagtaa tgaccagagt tacggacgtc
    12121 ataaagacgg tatggcggaa attggcactt ttcacggcgg cgatttacgc ggcctgatca
    12181 acaaactgga ttacctccag cagttgggcg ttaatgcttt atggataagc gccccatttg
    12241 agcaaattca cggctgggtc ggcggcggta caaaaggcga tttcccgcat tatgcctacc
    12301 acggttatta cacacaggac tggacgaatc ttgatgccaa tatgggcaac gaagccgatc
    12361 tacggacgct ggttgatagc gcacatcagc gcggtattcg tattctcttt gatgtcgtga
    12421 tgaaccacac cggctatgcc acgctggcgg atatgcagga gtatcagttt ggcgcgttat
    12481 atctttctgg tgacgaagtg aaaaaaacgc tgggtgaacg ctggagcgac tggaaacctg
    12541 ccgccgggca aacctggcat agctttaacg attacattaa tttcagcgac aaaacaggct
    12601 gggataaatg gtggggaaaa aactggatca gaacggatat cggcgattac gacaatcctg
    12661 gattcgacga tctcactatg tcgctggcct ttttgccgga tatcaaaacc gaatcaacta
    12721 ccgcttctgg tctgccggtg ttctataaaa acaaaacgga tactcacgct aaagtcatcg
    12781 aaggctttac acctcgcgat tacttaaccc actggttaag tcagtgggtc cgcgactatg
    12841 ggattgatgg ttttcgggtc gataccgcca aacatgttga gttgcccgcc tggcagcaac
    12901 tgaaaaccga agccagctcc gcgcttcgcg aatggaaaaa aactaacccc gacaaagcat
    12961 tagatgacaa acctttctgg atgaccggtg aagcctgggg ccacggcgtg atgcaaagtg
    13021 actactatcg ccacggcttc gatgcgatga tcaatttcga ttatcaggag caggcggcga
    13081 aagcagtcga ttgtctggcg cagatggata cgacctggca gcaaatggcg gagaaattgc
    13141 agggtttcaa cgtgttgagc tacctctcgt cgcatgatac ccgtctgttc cgtgaagggg
    13201 gcgacaaagc agcagagtta ttactattag cgccaggcgc ggtacaaatc ttttatggcg
    13261 atgaatcctc gcgtccgttc ggtcctacag gttctgatcc gctgcaaggt acacgttcgg
    13321 atatgaactg gcaggatgtt agcggtaaat ctgccgccaa cgtcgcgcac tggcagaaaa
    13381 tcagccagtt ccgcgcccgc catcccgcaa ttggcgcggg caaacaaacg acactttcgc
    13441 tgaagcaggg ctacggcttt gttcgtgagc atggcgacga taaagtgctg gtcatctggg
    13501 ctgggcaaca gtgacttttc cggcttcccg ttcatcagta cctcgggaag ccgccaacca
    13561 ggataaaatg tcagccctaa tcagcgttgc aggataaagc accgctcact cttcaacaga
    13621 ccgatttgca ccccagcaaa tgtagcgtta ttgttacctt ccttgctaca gagttcgaca
    13681 gatatcccgc tatgacattc tccctttttg gtgacaaatt tacccgccac tccggcatta
    13741 cgctgctgat ggaagatctg aacgacggtt tacgcacgcc tggcgcgatt atgctcggcg
    13801 gcggtaatcc ggcgcagatc ccggaaatgc aggactactt ccagacgcta ctgaccgaca
    13861 tgctggaaag tggcaaagcg actgatgcac tgtgtaacta cgacggtcca caggggaaaa
    13921 cggagctact cacactgctt gccggaatgc tgcgcgagaa gttgggttgg gatatcgaac
    13981 cacagaatat tgcactaaca aacggcagcc agagcgcgtt tttctactta tttaacctgt
    14041 ttgccggacg ccgtgccgat ggtcgggtca aaaaagtgct gttcccgctg gcaccggaat
    14101 acattggcta cgctgacgcc ggactggaag aagatctgtt tgtctctgcg cgtccgaata
    14161 ttgaactgct gccggaaggc cagtttaaat accacgtcga ttttgagcat ctgcatattg
    14221 gcgaagaaac cgggatgatt tgcgtctccc ggccgacgaa tccaacaggc aatgtgatta
    14281 ctgacgaaga gttgctgaag cttgacgcgc tggcgaatca acacggcatt ccgctggtga
    14341 ttgataacgc ttatggcgtc ccgttcccgg gtatcatctt cagtgaagcg cgcccgctat
    14401 ggaatccgaa tatcgtgctg tgcatgagtc tttccaagct ggggctgcct ggctcccgct
    14461 gcggcattat catcgccaat gaaaaaatca tcactgccat caccaatatg aacggcatta
    14521 tcagcctggc acctggcggt attggtccgg cgatgatgtg tgaaatgatt aagcgtaacg
    14581 atctgctgcg cctgtctgaa acagtcatca aaccgtttta ctaccagcgt gttcaggaaa
    14641 ctatcgccat cattcgccgc tatttaccgg aaaatcgctg cctgattcat aaaccggaag
    14701 gagccatttt cctctggcta tggtttaagg atttgcccat tacgaccgag cagctctatc
    14761 agcgcctgaa agcacgcggc gtgctgatgg tgccggggca caacgtcttc ccgggactgg
    14821 ataaaccgtg gccgcatacg catcaatgta tgcgcatgaa ctacgtacca gagccggaga
    14881 aaattgaggc gggggtgaag attctggcgg aagagataga aagagcctgg gctgaaagtc
    14941 actaaaaatt gcctgatgcg ctacgcttat caggcctaca tgatttctgc aatatattga
    15001 atttggaaga atttgtaggc cggataaggc gtttacgccg catctggcat aaacaaagcg
    15061 cactattccg gcgttgagaa acgccggaaa acgtttcaaa caggctgctg ccgtagccga
    15121 tgccgctgca ctttctcgac atccatgcac tgcaacgcct ttgtcgggca ggcttcaaca
    15181 caggccggcc ccgtctcccg atgccagcac agatcgcact taatcgccct cgcctttttg
    15241 cgcgaagaaa cgacctccat cgcaccaaac gggcaagcca gcatacagct tttacagcca
    15301 atgcaacgtg tttgttcaac gaaaatatgc ccatgttcgc ggcttatcgc gtcaacaggg
    15361 cagacattcg cgcacggtgc atcttcacac tgatgacagg ctactgccgt ggtccagctg
    15421 tggtctttaa tgacacgaat acgggaaata aactcgtctg gtgacaacgc agcgcaatcc
    15481 tgattctcct gatgcgacac tgcgcaagcc acttcacagg tacggcaacc gatacatttc
    15541 gtcgcatccg caataataaa ccggttcatg atcactcctt tgcactaaaa cagcagagtg
    15601 ccagagagcg cgtccctact gctttgatcc aacgaaggaa atgttaaagt tttggcactt
    15661 gtccaaagcg ttatgtgatc gcgcccaggt catccctgac agtaaatccc agttcattag
    15721 aaatagcctg cgcggtttca cgcagtggtt tcaggagatt tttctctccc acctgtttca
    15781 gacgtgatgt cgaaagcgaa atcgacacgg cgtacggcac ccgcccatga atatcaaaca
    15841 ccggaacagc aatacaggag acgccgagtt cgttttcttc tctgtccatc gccgctccgc
    15901 tttcacgaat gtgcgccagt tcgtcgaaca tcgcgggcag ctcggtaatg gtattgcggg
    15961 ttaacggctg gatctcatgc tgatggtttt cccagtatga cttcacgtag tccgggtgac
    16021 caaacgccat gtagatcttg cccattgcgg aacagtagag cggcatatgc tggccaatat
    16081 aggcacgggt tcgcagcatc ccggttgtgg gttccagctt ataaatcaaa atagcgtgat
    16141 cgtcttcgcg gctggagaag ttaatggttt caccagtggc gatgttcagt gcctcaagat
    16201 gcggagcggc gatatgaatg atattcagcg aagacagcgc cttctgcccg acggcaataa
    16261 atttggtagt caggcggtaa ctccctgcgg cgggcgcggt ggtcacatag ccgcaggact
    16321 gtaatccctg caataagcga tggacggtac tcttatttaa accagccagc tccgaaagat
    16381 gcgccaacgg acaaccgttt ggatagttgc tcaaaatctc aatcagcatc aacccgcgaa
    16441 acagactctg gcttccggct ggacgctctt tttcctgcgc catctcgttc tctttttttc
    16501 ccatcacttc tttccccatt ttgtcgcgtc ctgatggtag cgcaaagtgt gccgtagttc
    16561 acgatctcga cagataattt ataaccactt gatttttatg tcttttgaaa ttcatcaatc
    16621 agattgcttt gttaaaaagt gatcgatata tttgaaatca agtttcgcat attgaaattt
    16681 taagccaaaa aagcgatcaa aaaaacaagg aagcctggga tgaaagtgac atttgagcag
    16741 ttaaaagcag cctttaatcg ggccttaatt tcacgcggcg ttgacagcga aacggctgac
    16801 gcctgtgcag agatgttcgc ccgcaccacc gaatccggcg tttattctca cggcgttaat
    16861 cgtttccctc gtttcattca acaactggaa aacggcgata tcattcctga tgcccaaccc
    16921 aaacgtataa ccagcctcgg cgcaattgaa cagtgggatg cccagcgttc gatcggcaac
    16981 ctgacggcga aaaagatgat ggatcgcgcc attgaactgg ctgccgatca cggtattggt
    17041 ctggtggcac ttcgtaatgc caaccactgg atgcgcggcg gcagctacgg ctggcaggcg
    17101 gcggaaaaag gctatattgg catttgctgg accaactcca tcgccgtaat gccgccgtgg
    17161 ggcgcaaaag agtgtcgcat tggcactaac ccgctgatcg tcgccattcc ttccacgccg
    17221 atcaccatgg tcgatatgtc gatgtcgatg ttctcttacg gcatgttaga agttaaccgc
    17281 ctggcgggcc gtcagctccc ggtcgatggt ggctttgatg atgagggcaa tttgaccaaa
    17341 gaacctggcg ttatcgagaa gaatcgccgc attttgccga tgggctactg gaaaggttct
    17401 ggcatgtcga ttgtgctgga tatgatcgct actctccttt ccgacggcgc atcggttgcc
    17461 gaagtcaccc aggacaacag cgacgaatac ggcatttcac aaatttttat tgccattgaa
    17521 gtggacaagc ttatcgacgg tcccacccgc gatgccaagc tgcaacgcat catggattac
    17581 gttactaccg ctgaacgcgc tgacgaaaac caggccatcc gcttacccgg ccacgaattt
    17641 actaccctgc tggccgaaaa ccgccgtaac ggcatcactg ttgatgacag cgtgtgggcc
    17701 aaaatccagg cgttatgagg agataagtca tgatttttgg acatatcgcg cagcccaatc
    17761 cgtgccgttt gcccgccgcc attgaaaagg cgctcgattt tctgcgcgct accaacttca
    17821 acgtcctgga gccgggcgtt gtcgaaatcg acggcaagaa tatttatgcg caaattatcg
    17881 atttaaccac acgcgaagcg gtggaaaacc gtccggaagt gcatcgtcgg tatatcgata
    17941 ttcagtttct ggcgtggggt caagagaaaa tcggcattgc tattgataca ggaaataata
    18001 aagtcagcga atcactatta gagcagcgcg atattatttt ttatcatgtc agtgaacatg
    18061 aatcatttat agaaatgata ccgggcagct acgctatttt cttcccgcag gatgttcacc
    18121 gaccaggttg tattctgcaa acaggcctct gagatacgaa aaattgtggt taaagtcgca
    18181 ttaacagcgc tgaattaatc aaataatcgt ctacgccaga acgactgggt aatgttattg
    18241 ctctaactat attaataatt taggttgctg cacatgcaac ttgaattatg acagacatag
    18301 cctcaaggaa tagctatgaa aaaaatactt gaagtaatac tggcgattaa tctcgccgta
    18361 ctttcctgta ttgtgtttat aaacattatt ttaagatatg gttttcagac aagcatttta
    18421 tctgtagatg aattgtcacg ttatttattt gtctggttaa catttattgg cgcgattgtg
    18481 gcttttatgg ataacgccca cgttcaggtc acctttctgg tggagaaact ctcccccgca
    18541 tggcaacgac gagtcgctct ggttacccat tccttaatct tatttatttg tggcgcactg
    18601 gcctggggcg caacactaaa aacaattcag gactggagcg attattcacc gatcctcggt
    18661 ttgcccatcg gcctgatgta tgccgcttgt ctgcccacca gcctcgttat cgcattcttt
    18721 gaactgcgtc atttatatca actcatcacg cgtagcaatt ctctaacgtc gccaccgcaa
    18781 ggagcttaat catggctgtg ctgatttttc tgggctgtct gttgggtggt attgctatcg
    18841 gtttgcctat tgcctgggca ctgttgttgt gcggggcggc gttaatgttc tggctggaca
    18901 tgtttgatgt ccagatcatg gcacaaacgc tggtgaacgg agccgatagc ttctccctgc
    18961 tggcgattcc gttctttgtg ctggcgggtg aaatcatgaa tgcgggcggc ttgtcaaaac
    19021 gcattgttga cctgccgatg aaactggtgg ggcataaacc aggcgggctg ggctacgtcg
    19081 gcgtgctggc agctatgatt atggcgagcc tttctggttc tgccgttgcg gataccgccg
    19141 ccgttgccgc tctactggtg ccgatgatgc gcagcgccaa ctacccggtc aaccgggcgg
    19201 cggggctgat tgcctctggc ggcattatcg cgccaattat tcccccttcc attccgttta
    19261 ttatcttcgg cgtttccagc ggattatcca tcagtaagct gtttatggcg ggcattgccc
    19321 ctgacatgat gatgggcgca acgctgatgc ttacctggtg gtggcaggcc agtcgcctta
    19381 atttaccccg ccagcaaaaa gcaacgatgc aggaaatctg gcactctttt gtctccggta
    19441 tctgggctct gtttcttcca gtcatcatta ttggcgggtt tcgctccggt ctgtttaccc
    19501 ctaccgaagc cggggccgtt gctgctttct atgcgctgtt tgtcgccaca gttatttacc
    19561 gtgaaatgac cttcgccaca ctttggcatg tactcattgg cgcggcgaaa accacctcag
    19621 tggttatgtt tctggtggcc tcggcacaag tttccacctg gctgattacc attgctgaac
    19681 tgccgatgat ggtttctgat ttactgcaac cgttggtcga ttcaccgcgt ctgctgttta
    19741 tcgtcattat ggtggctatc ctgattgtcg gca
//
LOCUS       DADMJE010000069        19592 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.070, whole genome shotgun sequence.
ACCESSION   DADMJE010000069 DADMJE010000000
VERSION     DADMJE010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19592)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19592)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19592
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.070"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(187..528)
                     /locus_tag="JN001_002200"
     CDS             complement(187..528)
                     /locus_tag="JN001_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY9053424.1"
                     /translation="MRIFVYGSLRHKQGNSHWMTNAQLLGDFSIDNYQLYSLGHYPGA
                     VPGNGTVHGEVYRIDNATLAELDALRTRGGEYARQLIQTPYGSAWMYVYQRPVEGLKL
                     IESGDWLDRDK"
     gene            complement(531..4310)
                     /gene="tamB"
                     /locus_tag="JN001_002201"
     CDS             complement(531..4310)
                     /gene="tamB"
                     /locus_tag="JN001_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamB"
                     /protein_id="HAY9053425.1"
                     /translation="MSLWKKISLGVVIVILLLLGSVAFLVGTTSGLHLVFKAADRWVP
                     GLDIGKVTGGWRDLTLSDVRYEQPGVAVKAGNLHLAVGLECLWNSSVCINDLALKDIQ
                     VNIDSKKMPPSEQVEEEEDSGPLDLSTPYPITLTRVALDNVNIKIDDTTVSVMDFTSG
                     LNWQEKTLTLKPTSLKGLLIALPKVAEVAQEEVVEPKIENPQPDEKPLGETLKDLFSR
                     PVLPEMTDLHLPLNLNIEEFKGEQLRVTGDTDITVRTMLLKVSSIDGNTKLDALDIDS
                     NQGIVNASGTAQLSDNWPVDITLNSTLNVEPLKGEKVKLKVGGALREQLEIGVNLSGP
                     VDMDLRAQTRLAEAGLPLNVEVNSKQLYWPFTGEKQYQADDLKLKLTGKMTDYTLSMR
                     TAVKGQEIPPATITLDAKGNEQQVNLDKLTVAALEGKTELKALLDWQQAISWRGELTL
                     NGINTAKEFPEWPSKLNGLIKTRGSLYGGTWQMEVPELKLTGNVKQNKVNVDGTLKGN
                     SYMQWMIPGLHLELGPNSAEVKGELGVKDLNLDATINAPGLDNALPGLGGTAKGLVKV
                     RGTVEAPQLLADITARGLRWQELSVTQVRVEGDIKSTDQIAGKLDVRVEQISQPDVNI
                     NLVTLNAKGSEKQHELQLRIQGEPVSGQLNLAGSFDRKEERWKGTLSNTRFQTLVGPW
                     SLTRDIALDYRNKEQKISIGPHCWLNPNAELCVPQTIDAGAEGRAVVNLNRFDFAMLK
                     PFMPETTQASGIFTGKADVAWDTTKEGLPQGSITLSGRNVQVTQTVNDAALPVAFQTL
                     NLTAELRNNRAELGWTIRLTNNGQFDGQVLVTDPQGRRNLGGNVNIRNFNLAMINPIF
                     TRGEKAAGMVSANLRLGGDVQSPQLFGQLQVTGVDIDGNFMPFDMQPSQLAVNFNGMR
                     STLAGTVRTQQGEIYLNGDADWSQIENWRARVTAKGSKVRITVPPMVRMDVSPDVVFE
                     ATPNLFTLDGRVDVPWARIVVHDLPESAVGVSSDVVMLNDNLQPEEPKTASIPINSNL
                     IVHVGNNVRIDAFGLKARLTGDLNVVQDKQGLGLNGQINIPEGRFHAYGQDLIVRKGE
                     LLFSGPPDQPYLNIEAIRNPDATEDDVIAGVRVTGLADEPKAEIFSDPAMSQQAALSY
                     LLRGQGLESDQSDSAAMTSMLIGLGVAQSGQIVGKIGETFGVSNLALDTQGVGDSSQV
                     VVSGYVLPGLQVKYGVGIFDSIATLTLRYRLMPKLYLEAVSGVDQALDLLYQFEF"
     gene            complement(4307..6040)
                     /gene="tamA"
                     /locus_tag="JN001_002202"
     CDS             complement(4307..6040)
                     /gene="tamA"
                     /locus_tag="JN001_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter assembly complex protein TamA"
                     /protein_id="HAY9053426.1"
                     /translation="MRYIRQLCCVSLLCLSGSAVAANVRLQVEGLSGQLEKNVRAQLS
                     TIESDEVTPDRRFRARVDDAIREGLKALGYYQPTIEFDLRPPPKKGRQVLIAKVTPGV
                     PVLIGGTDVVLRGGARTDKDYLKLLDTRPAIGTVLNQGDYENFKKSLTSIALRKGYFD
                     SEFTKAQLGIALGLHKAFWDIDYNSGERYRFGHVTFEGSQIRDEYLQNLVPFKEGDEY
                     ESKDLAELNRRLSATGWFNSVVVAPQFDKARETKVLPLTGVVSPRTENTIETGVGYST
                     DVGPRVKATWKKPWMNSYGHSLTTSTSISAPEQTLDFSYKMPLLKNPLEQYYLVQGGF
                     KRTDLNDTESDSTTLVASRYWDLSSGWQRAINLRWSLDHFTQGEITNTTMLFYPGVMI
                     SRTRSCGGLMPTWGDSQRYSIDYSNTAWGSDVDFSVFQAQNVWIRTLYDRHRFVTRGT
                     LGWIETGDFDKVPPDLRFFAGGDRSIRGYKYKSIAPKYANGDLKGASKLITGSLEYQY
                     NVTGKWWGAVFVDSGEAVSDIRRSDFKTGTGVGVRWESPVGPIKLDFAVPVADKDEHG
                     LQFYIGLGPEL"
     gene            6246..6884
                     /gene="msrA"
                     /locus_tag="JN001_002203"
     CDS             6246..6884
                     /gene="msrA"
                     /locus_tag="JN001_002203"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HAY9053427.1"
                     /translation="MSLFDKKHLVSPADALPGRNTPMPVATLHAVNGHSMTNEPDGME
                     IAIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPNPTYREVCSGDTGHAEAVRIVYD
                     PSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYPLTPEQDAAARASLERFQAA
                     MLAADDDRHITTEIANATPFYYAEDDHQQYLHKNPYGYCGIGGIGVCLPPEA"
     gene            7207..8550
                     /locus_tag="JN001_002204"
     CDS             7207..8550
                     /locus_tag="JN001_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY9053428.1"
                     /translation="MLNSILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINA
                     QRVLNMQENPGMFFTVVQIGLNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSEQLSF
                     ILSFSLVTGMFILFADLTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANM
                     IFRIFKLPMVRKDDITSDDIYAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTP
                     RENVIWFDLHEDEQSLKNKVAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLA
                     LNSGVQIRNTLIVPDTLTLSEALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMG
                     DLVGQGLEEQIVARDENSWLIDGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRK
                     IPKRTDSVKFAGYKFEVVDIDNYRIDQLLVTRIDSKATALSPKLPDAKDKEESVA"
     gene            complement(8612..8818)
                     /locus_tag="JN001_002205"
     CDS             complement(8612..8818)
                     /locus_tag="JN001_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1107 domain-containing protein"
                     /protein_id="HAY9053429.1"
                     /translation="MKIFQRYNPLQVAKYVKILFRGRLYIKDVGAFEFDKGKILIPKV
                     KDKLHLSVMSEVNRQVMRLQTEMA"
     gene            9143..9697
                     /locus_tag="JN001_002206"
     CDS             9143..9697
                     /locus_tag="JN001_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtfJ family protein"
                     /protein_id="HAY9053430.1"
                     /translation="MTLRKILALTCLLLPMMASAHQFETGQRVPPIGITDRGELVLDK
                     DQFSYKTWNSAQLVGKVRVLQHIAGRTSAKEKNATLIEAIKSAKLPHDRYQTTTIVNT
                     DDAIPGSGMFVRSSLESNKKLYPWSQFIVDSNGVARGAWQLDEESSAVVVLDKDGRVQ
                     WAKDGALTQEEVQQVMDLLQKLLK"
     gene            complement(9787..10698)
                     /locus_tag="JN001_002207"
     CDS             complement(9787..10698)
                     /locus_tag="JN001_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053431.1"
                     /translation="MLPRIRHNNFIGAVELFVKSSHTKTHSNNFFNNIQHAFKKKDWV
                     SNYDSLLTLWEFFRCATQIDKDSYQVLSSKNETVKAMDKFLISFSLKDNGAEYTMTLR
                     GSGFEYEEIPITINEYNSFMDFKNREFPLEQNRRLYAWDILQKKQSDIPKRIKGYIHQ
                     AIGDVSLGYALLEDIVSKLKRGKFELQIPGGGIKECDGWYIYEKIIDDNFAIVIESLG
                     FALKIYGGDERFRNGSSVVLEDEDYSLIYNFLVNAGCQQVELAEQVDAIVSANLAVDS
                     DITEEEICEKYKSTIEAFKKEQLALPV"
     gene            complement(10910..11650)
                     /gene="cysQ"
                     /locus_tag="JN001_002208"
     CDS             complement(10910..11650)
                     /gene="cysQ"
                     /locus_tag="JN001_002208"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HAY9053432.1"
                     /translation="MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAA
                     HTVIMDGLRTLTPDIPVLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNI
                     ALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKQIQVRDARPPLVVISRSHAD
                     AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGA
                     HVHDWQGKPLDYTPRESFLNPGFRVSIY"
     gene            11840..13783
                     /gene="cpdB"
                     /locus_tag="JN001_002209"
     CDS             11840..13783
                     /gene="cpdB"
                     /locus_tag="JN001_002209"
                     /EC_number="3.1.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2',3'-cyclic-nucleotide 2'-phosphodiesterase"
                     /protein_id="HAY9053433.1"
                     /translation="MIKFSATLLATLIAASVNAATVDLRIMETTDLHSNMMDFDYYKD
                     TATEKFGLVRTASLINDARNEVKNSVLVDNGDLIQGSPLADYMSAKGLKAGDVHPVYK
                     ALNTLDYTVGTLGNHEFNYGLDYLKNALAGAKFPYVNANVIDARTKQPMFTPYLIKDT
                     EVVDKDGKKQTLKIGYIGVVPPQIMGWDKANLSGKVTVNDITETVRKYVPEMREKGAD
                     VVVVLAHSGLSADPYKVMAENSVYYLSEIPGVNAIMFGHAHAVFPGKDFADIEEADIT
                     KGTLNGVPAVMPGMWGDHLGVVDLQLSNDSGKWQVTQAKAEARPIYDIANKKSLAAED
                     SKLVETLKADHDATRQFVSKPIGKSADNMYSYLALVQDDPTVQVVNNAQKAYVEHYIQ
                     GDPDLAKLPVLSAAAPFKVGGRKNDPASYVEVEKGQLTFRNAADLYLYPNTLIVVKAS
                     GKEVKEWLECSAGQFNQIDPNSTKPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYD
                     GECQMINANAERIKNLTFNGKPIDPNAMFLVATNNYRAYGGKFAGTGDRHIAFASPDE
                     NRSVLTAWIADESKRAGEIHPAADNNWRLAPIAGDKKLDIRFETSPSDKAAAFIKEKG
                     QYPMNKVATDDIGFAIYQVDLSK"
     gene            complement(13912..14292)
                     /locus_tag="JN001_002210"
     CDS             complement(13912..14292)
                     /locus_tag="JN001_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418633.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HAY9053434.1"
                     /translation="MSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREG
                     THRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEK
                     VAALADWIELNLPEVLAVRDEHAA"
     gene            14381..15241
                     /gene="qorB"
                     /locus_tag="JN001_002211"
     CDS             14381..15241
                     /gene="qorB"
                     /locus_tag="JN001_002211"
                     /EC_number="1.6.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H:quinone oxidoreductase"
                     /protein_id="HAY9053435.1"
                     /translation="MIAITGATGQLGHYIIESLMKTVPASQIVAIVRNPAKAQALAAQ
                     GITVRQADYGDEAALTSALQGVEKLLLISSSEVGQRAPQHRNVINAAKAAGVKFIAYT
                     SLLHADTSPLGLADEHIETEKMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA
                     AGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAWTLTQLAAELTKQSGKQVT
                     YQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDNSKTLSKLIGRPTTTLAE
                     SVSHLFNVNN"
     gene            15349..16314
                     /locus_tag="JN001_002212"
     CDS             15349..16314
                     /locus_tag="JN001_002212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418631.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY9053436.1"
                     /translation="MISGVLYALLAGLMWGLIFVGPLIVPEYPAMLQSMGRYLALGLI
                     ALPIAWLGRVRLRQLARRDWLTALMLTMMGNLIYYFCLASAIQRTGAPVSTMIIGTLP
                     VVIPVFANLLYSQRDGKLAWGKLAPALVCIGIGLACVNIAELNHGLPDFDWARYTSGI
                     VLALVSVVCWAWYALRNARWLRENPDKHPMMWATAQALVTLPVSLIGYLVACYWLNTQ
                     TPDFSLPFGPRPLVFISLMVAIAVLCSWVGALCWNVASQRLPTVILGPLIVFETLAGL
                     LYTFLIRQQMPPLMTLSGIALLVVGVVIVVRAKPEKPLTESVSES"
     gene            16422..17084
                     /gene="ytfE"
                     /locus_tag="JN001_002213"
     CDS             16422..17084
                     /gene="ytfE"
                     /locus_tag="JN001_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster repair protein YtfE"
                     /protein_id="HAY9053437.1"
                     /translation="MAYRDQPLGELALSIPRASALFRKYNMDYCCGGKQTLARAAARK
                     ELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPELILQATKVE
                     RVHADKPSVPKGLTKYLTMLHEELSSHMMKEEQILFPMIKQGMGSQAMGPISVMESEH
                     DEAGELLEVIKHTTNNVTPPPEACTTWKAMYNGINELIDDLMDHISLENNVLFPRALA
                     GE"
     gene            complement(17129..18541)
                     /gene="cycA"
                     /locus_tag="JN001_002214"
                     /gene_synonym="dagA"
     CDS             complement(17129..18541)
                     /gene="cycA"
                     /locus_tag="JN001_002214"
                     /gene_synonym="dagA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-serine/D-alanine/glycine transporter"
                     /protein_id="HAY9053438.1"
                     /translation="MVDQVKVVADDQAPAEQSLRRNLTNRHIQLIAIGGAIGTGLFLG
                     SGKTISLAGPSIIFVYMIIGFMLFFVMRAMGELLLSNLEYKSFSDFASDLLGPWTGYF
                     TGWTYWFCWVVTGMADVVAITAYAQFWFPDLSDWVASLAVIVLLLTLNLATVKMFGEM
                     EFWFAMIKIVAIVSLIVVGLVMVAMHFQSPTGVEASFAHLWNDGGWFPKGLSGFFAGF
                     QIAVFAFVGIELVGTTAAETKDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSV
                     VPEKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKA
                     FAKLSKRAVPAKGLTFSCICLLGGVVMLYVNPSVIGAFTMITTVSAILFMFVWTIILC
                     SYLVYRKQRPHLHEKSIYKMPLGKLMCWVCMAFFVFVVVLLTLEDDTRQALLVTPLWF
                     IALGLGWLFIGKKRAAELRK"
     gene            complement(18850..19470)
                     /locus_tag="JN001_002215"
     CDS             complement(18850..19470)
                     /locus_tag="JN001_002215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY9053439.1"
                     /translation="MTTPTFDTIEAQASYGIGLQVGQQLSESGLEGLLPEALVAGIAD
                     ALEGKHPAVPVDVVHRALREIHERADAVRRQRFQAMAAEGVKYLEENAKKEGVNSTES
                     GLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNGVIPGWIE
                     ALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEIL"
BASE COUNT         4798 a         5188 c         4774 g         4832 t
ORIGIN      
        1 actcaccgtt caaagcgtgc ccccgtttta cccctgcaca tttgtgaacg ccagcagagt
       61 tttttatgcg attgcagata tggaaagcgg ctcggagaga aaagcaaaag atggaaaagt
      121 tacaaaaaaa aatcgcgaga tacatcgcat aaaacaacgc cacccgaagg tggcgtgctt
      181 ttattattac ttatccctgt ctaaccagtc gccgctttca attagcttta atccctcgac
      241 gggtcgttga taaacgtaca tccatgcact cccgtacggc gtctgaatca actggcgcgc
      301 gtattcaccg cccctggtgc gcaaggcatc aagttcggcc agcgtggcgt tgtcaatacg
      361 ataaacttca ccgtgtaccg ttccgttccc cggaactgcg cctggatagt ggcccaggct
      421 atacaactgg tagttatcga tactgaaatc gcccagtaac tgggcattgg tcatccagtg
      481 actgttgcct tgtttgtggc gtaaactgcc gtagacaaat attcgcattg ctaaaactcg
      541 aactgataga gcaaatccag tgcctggtct acaccagaca cggcttccag atatagctta
      601 ggcatcaggc gataacgtaa cgtgagtgtt gctatagagt caaatatacc cacgccgtat
      661 ttcacttgca ggcctggcaa tacatagccg ctgaccacta cctgggagga gtcgcctact
      721 ccctgggtgt cgagcgctaa attgcttacg ccaaacgtct cgccgatttt acccacaatc
      781 tggccacttt gcgcaacccc cagaccaatc agcatcgagg tcattgccgc actgtcgctc
      841 tgatcgctct ccagcccttg tccacgtagc aaataagaca atgcagcttg ttgcgacatc
      901 gccgggtcag agaagatctc cgctttcggt tcgtccgcca gaccagtgac gcgaactccg
      961 gcgattacgt cgtcttctgt agcatccggg ttacgaatag cttcaatatt aagatacggt
     1021 tgatctggcg gaccagagaa cagtagctca cccttacgca caatcagatc ctgaccatag
     1081 gcatggaagc gcccttcagg gatgttgatc tgcccgttca ggcccagccc ttgtttgtcc
     1141 tgaacgacgt taagatcgcc cgtcagccgc gctttcaggc caaaggcgtc aatgcgcaca
     1201 ttgttgccaa cgtggacaat caggttactg ttaatcggaa tcgacgccgt tttcggctct
     1261 tccggttgca ggttatcgtt aagcatcacc acatcgctgg agacgcctac tgcgctttcc
     1321 ggcagatcgt gcaccacgat gcgcgcccac gggacatcca cgcgaccatc gagggtaaac
     1381 aggtttggtg tagcctcgaa tacaacatct ggcgatacat ccattcgtac catcggcggc
     1441 acggtgatcc gcactttact gcctttcgcc gttactcgtg cccgccagtt ttcaatttgg
     1501 ctccagtcgg catcaccgtt caggtagatt tcaccctgct gggtccgtac tgtaccggca
     1561 agcgtcgagc gcataccgtt aaagttgacc gcaagctggc tcggctgcat atcaaacggc
     1621 ataaagttgc cgtcgatatc cacacccgta acctgaagct gaccaaacaa ctgcgggctt
     1681 tgcacatcac cacccagacg caagttggca ctcaccatcc ccgctgcttt ttccccacga
     1741 gtaaagatgg ggtttatcat cgcaaggttg aagttacgga tattgacgtt gccaccaaga
     1801 ttacggcggc cttgcggatc ggtcaccagc acctgtccat caaactggcc gttattggtc
     1861 aggcggatgg tccagcccaa ttcggcacgg ttgttacgca attccgccgt cagattcagt
     1921 gtctgaaacg ccaccggcag cgccgcatcg ttgacggttt gcgttacctg cacgttacgc
     1981 cccgaaaggg tgatactgcc ctgcggcagc ccctctttcg tggtgtccca ggcaacatcc
     2041 gctttacccg tgaagatacc gctggcctga gtggtttctg gcataaacgg tttcagcatg
     2101 gcgaagtcga agcggttgag attcaccacc gcacgccctt cggcccccgc atcgatagtt
     2161 tgcggcacgc acagttccgc attcgggtta agccagcagt gtggcccgat gctgattttt
     2221 tgctccttat tgcggtaatc cagcgcaata tcgcgggtca gcgaccacgg gccgaccagc
     2281 gtctggaagc gggtattgct aagagttccc ttccagcgtt cttctttgcg atcaaaactt
     2341 cctgccagat taagctgccc ggagacaggc tcgccctgaa tccgcaactg tagctcgtgc
     2401 tgcttttcgc tgcctttggc attcagggtg acgaggttga tatttacatc cggctgcgaa
     2461 atttgctcaa cgcgtacgtc gagtttcccg gcgatctgat cggtggattt aatgtcgcct
     2521 tccacgcgaa cctgcgtcac ggaaagttcc tgccagcgca ggccgcgcgc ggtgatatct
     2581 gccagtagtt gtggcgcttc caccgtgccg cgtactttca ccagcccttt cgctgtaccg
     2641 ccaagccccg gcagcgcgtt atccagcccc ggcgcgttga tggtggcatc aagattgaga
     2701 tcttttaccc ccagctcgcc tttcacttcg gcactgtttg gccccagttc cagatgaagc
     2761 ccagggatca tccactgcat ataactgttg cctttcagcg tgccgtcaac gttcactttg
     2821 ttctgtttga cgttaccggt cagcttcagt tctggcacct ccatctgcca ggtgccgccg
     2881 tacaggctac cgcgggtttt aatcaagcca ttgagtttcg acggccactc cgggaactct
     2941 ttggcggtgt taatgccatt aagcgttagc tcaccgcgcc aactaatggc ctgctgccag
     3001 tcgagcaacg ccttgagttc agttttccct tccagcgccg cgacggtgag tttgtcgaga
     3061 ttgacctgct gttcattacc tttggcatca agggtaatgg tggctggcgg gatctcctgt
     3121 cccttcactg ccgtacgcat agagagcgtg taatcggtca ttttgccggt aagtttcagt
     3181 ttcagatcat ccgcctgata ctgcttctca ccagtgaacg gccagtaaag ctgtttgctg
     3241 ttcacttcca cgttgagcgg caatccggct tccgccagtc gcgtctgggc gcgtaaatcc
     3301 atatccaccg gaccggaaag attaacgcca atctccagct gttcgcgcag cgcgccgccc
     3361 acttttagct tcactttttc acctttcaac ggctccacgt tcagtgtgct gttgagggtg
     3421 atatccaccg gccagttgtc tgacagctgc gccgtgccgc tggcgttgac gatcccctgg
     3481 ttggaatcga tatccagggc gtccagttta gtattgccgt caatgctgct cactttcagc
     3541 agcatggtgc gcacggtgat gtccgtgtcg cccgtcacgc gtaactgctc gcctttaaac
     3601 tcttcaatgt tcaggttaag cggcaaatgc aagtcggtca tttccggcaa taccgggcga
     3661 gaaaagagat ctttcagcgt ttcgccgagc ggcttttcat ccggctgcgg attttcaatt
     3721 ttcggttcga ccacttcttc ctgcgccact tccgccactt tcggcagagc aatcagcagg
     3781 cctttcagcg acgtcggttt cagggtcagg gttttctcct gccagttcag gccggaggtg
     3841 aagtccatca ccgacaccgt ggtgtcatca atcttgatgt tgacgttgtc cagcgccacc
     3901 cgtgtcaggg tgatgggata cggcgtggag agatccagcg gaccgctatc ttcctcttct
     3961 tcaacctgtt cagaaggagg cattttttta ctgtcgatgt tgacctgaat gtctttcagc
     4021 gccaggtcat taatacaaac gctactgttc cacaggcact caagaccgac cgccagatgc
     4081 agattacccg cttttaccgc cacgcctggc tgctcataac gaacgtcaga caaggtgaga
     4141 tcgcgccagc cgccggtgac cttgccaata tccagtcctg gcacccagcg atccgccgct
     4201 ttaaatacaa gatgcaggcc gctggtggtg cccaccagaa acgccaccga tcccagcaac
     4261 agtaagataa cgataaccac gccgaggctg atttttttcc ataaactcat aattctggcc
     4321 ccagaccgat gtaaaactgt aacccgtgtt cgtctttatc cgcgaccggt acggcaaaat
     4381 cgagtttgat tggcccgacc ggcgattccc agcgcacgcc gaccccggta ccggttttaa
     4441 agtcgctgcg gcgaatatcg cttaccgctt cgccactatc gacaaacacc gcgccccacc
     4501 attttccggt cacgttgtac tggtattcca gcgatccggt tatcaacttc gaggcccctt
     4561 tcaggtcacc gttggcgtat ttcggggcga tagatttgta tttgtagccg cgaatactgc
     4621 gatcgccccc ggcgaaaaaa cgcagatccg gcggtacttt gtcgaaatca ccggtttcaa
     4681 tccagcccag cgtgccgcgt gtaacgaaac gatggcgatc gtacagtgtg cggatccaga
     4741 cgttctgcgc ctggaaaacg gagaaatcga catctgagcc ccaggccgtg ttggagtagt
     4801 cgatagagta gcgttgcgag tcgccccagg ttggcatcag gccaccacaa gaacgcgtgc
     4861 ggctaatcat caccccagga taaaacagca tcgtggtgtt ggtaatttca ccctgagtaa
     4921 agtggtcgag actccagcgc aggttaatgg cacgctgcca accgctggag agatcccagt
     4981 agcgagaagc caccagcgta gtggagtcag attcggtatc gttcaggtca gtgcgcttaa
     5041 aaccgccctg caccaaataa tattgttcca gtggattctt cagcagcggc attttatagc
     5101 tgaagtcgag ggtctgttcc ggcgcggaaa tactggtact ggtggtcaaa ctgtgaccgt
     5161 atgagttcat ccacggcttt ttccacgtcg ctttcacgcg cggtcccacg tccgtagagt
     5221 aaccgacccc ggtttcgatg gtgttttctg ttcgcggcga aaccacgccc gtcaatggta
     5281 atactttcgt ttcgcgcgct ttatcaaatt gtggagccac caccaccgag ttaaaccagc
     5341 cggtagcaga aagtcggcgg ttcagttccg ccagatcttt cgattcatac tcatcgccct
     5401 ctttaaacgg caccagattt tgcaggtatt catcgcggat ttgtgatcct tcaaaggtca
     5461 catgcccaaa gcggtaacgt tcgccactgt tataatcaat atcccagaag gctttatgca
     5521 ggccgagcgc aatgcccagc tgcgctttgg taaattcgct atcgaaataa cctttacgca
     5581 acgcaatact ggttaaggac tttttgaaat tttcataatc gccctggttc agtaccgtac
     5641 caatagccgg gcgagtatcg agcaatttca aatagtcttt atcggtccgc gcgccgccgc
     5701 gcaataccac atcggtgccg ccaattaaca ccggcacacc tggcgtgact ttggcgatca
     5761 atacctgccg ccctttcttt ggcggtggac ggagatcaaa ttcaatggtc ggctggtaat
     5821 aacccagcgc tttcagacct tcacggatgg catcatcgac gcgtgcgcga aagcggcggt
     5881 ctggcgtcac ttcatcactt tcaatcgtag aaagctgcgc acgaacgttc ttttccagct
     5941 gtcccgataa cccctcgacc tgtagacgga cgttcgcggc gacggcagat ccgcttaagc
     6001 agagtaagct tacacagcat aactgtcgga tatagcgcac attttctcct gaatatcctt
     6061 ttttcctgcc cctggaacgc cgttaaacgg cttaacaaaa atccagtaat atggattaaa
     6121 aagcagacta aaccccaaat atttcttatg ttttacttta gacctattca cggtggttat
     6181 tgtgtgcaaa tacgcctctt gttacaacct taaccccaat gaccgatttt cgggagagcg
     6241 acaccatgag tttatttgat aaaaagcatc tggtttcccc cgccgatgcc ctgcctggac
     6301 gtaacacccc gatgcccgta gccacgctgc atgcggtcaa cggtcactca atgaccaatg
     6361 aacctgacgg aatggagatt gccatttttg cgatgggttg tttctggggt gtggagcgtc
     6421 tgttctggca gttacccggc gtttacagca ccgccgcagg ctataccggc ggctatacgc
     6481 caaatccgac ttatcgggaa gtgtgctccg gtgatacggg tcatgccgaa gcggtacgca
     6541 ttgtttacga tccttccgtc atcagctatg agcagttgct acaggtattt tgggagaatc
     6601 acgatcccgc ccagggaatg cgtcagggca atgaccacgg cacgcagtat cgttcagcga
     6661 tttatccgct gaccccagaa caggatgccg cagctcgcgc cagtctggaa cgttttcagg
     6721 cggcgatgct tgccgccgat gacgatcgtc acatcaccac ggaaatcgct aacgccacac
     6781 cgttttatta tgccgaagat gaccaccagc aatatctgca taaaaaccca tatggttact
     6841 gtggaattgg cggaattggc gtctgtctgc cgccggaagc atagcgttac gggtacaaat
     6901 gtagtttgtt gataaagtgc tctttgtcta tgcctgatgc ggcttaaacg acttaccagg
     6961 cctacaaaat cgtccaaatt caatatattg caaggactgc gtaggcctga tcggcatagc
     7021 gcatcaggca gtattgcatt tatcagcagt ctgaatttta accctctggc gactttacag
     7081 taccttacgc tatactagcc actgaaaatt ccggttcact ttcttcgaat cggctttcaa
     7141 tgtgtatttc acacaaatta atcaactttc ccttccgagg atctggcctg aaaggtcgga
     7201 taagatatgt taaacagtat tttagtcata ctctgcttga tcgctgtaag tgcgttcttc
     7261 tcgatgtccg agatctcgct tgccgcctca cgcaaaatca aacttaaact gctggctgat
     7321 gaaggcaata taaatgccca acgcgttctg aatatgcagg aaaatcccgg catgttcttt
     7381 accgtggtcc aaatcggtct gaacgcagtg gcgattctcg gcggtatcgt cggtgatgcg
     7441 gcattttctc cagcttttca cagcctgttc tcccgctata tgtcggcaga gctctctgag
     7501 caactgagct ttattctctc tttctcgtta gtgactggca tgtttatcct gtttgcggat
     7561 ttaaccccga aacgcatcgg tatgattgcg ccagaagcgg tggctttgcg tatcatcaac
     7621 ccgatgcgct tctgcctgta cgtttgcacc ccgctggtgt ggttcttcaa cggcctggcg
     7681 aacatgatct tccgtatttt caaactgcca atggtacgta aagatgacat cacttctgat
     7741 gacatctacg cggtagtgga agccggtgcg ctggcgggcg tgttacgtaa acaggaacac
     7801 gagctgattg aaaacgtctt tgagctggaa tcccgtaccg ttccgtcttc aatgacaccg
     7861 cgtgaaaacg tgatttggtt tgatctccac gaagatgagc aaagcctgaa gaataaggtg
     7921 gcggaacatc cgcactctaa gttcctcgtc tgtaatgaag atattgacca catcatcggt
     7981 tatgtcgatt ctaaagacct gctgaaccgc gtgctggcta accaaagcct ggcactgaac
     8041 agcggcgtac aaattcgcaa cacgctgatt gtgccggata cgttaaccct ttcagaggcg
     8101 ttggaaagtt ttaaaaccgc aggtgaagac ttcgcggtga tcatgaacga gtacgcgctg
     8161 gtggtgggga tcatcaccct caacgacgtg atgaccacgc tgatgggcga tctggtcggt
     8221 caggggctgg aagagcagat tgtcgcccgt gatgagaact catggctgat tgacggcggc
     8281 accccaattg acgacgtcat gcgcgtgctg gatattgacg agttcccgca gtcgggcaac
     8341 tacgaaacca tcggcggctt tatgatgttt atgctgcgta agatcccgaa acgcaccgat
     8401 tcggtgaaat tcgccggcta caaatttgaa gtggtggata tcgataacta ccgcatcgac
     8461 cagctgctgg tgacccggat cgacagcaag gccaccgccc tttcgccaaa actgcctgac
     8521 gctaaagata aagaagaaag cgtcgcgtaa cccccagaaa catcaacggc tcctgaatca
     8581 ggagccgtct tattactgca tagcactttg gttaagccat ctctgtttgc agacgcataa
     8641 cctgacggtt aacttcggac atcactgaca aatgcagctt atccttcact tttgggataa
     8701 gaatcttacc cttatcaaat tcaaaagcgc caacgtcctt gatgtataac cgtccacgga
     8761 acaggatctt tacgtacttc gccacctgaa gtgggttgta ccgttggaaa attttcattg
     8821 ttatctcctg ctgagtatta cgcctgtgcg gtgccacaat cggcccaact attatgagac
     8881 gcaaatttta atgcttagtg actatagact atccgggcaa tgtttccacc gcgtataact
     8941 ttttttacct aaaggttaca attattcaga attatctttt taccgaagcg cggtcttcag
     9001 tataagcatt catttttcat atgatttgtg cgcttgaccg caaactggca tcacacttgc
     9061 gggaaattcg ataaatagca catatgatta aaactcagat ccaagtggtc ggatcacctg
     9121 catatcataa gaaggaaaca ccatgaccct acgcaagatt ctggcactca cctgcctgct
     9181 gttgccgatg atggcttccg cacatcagtt cgaaaccggt cagcgagtgc cgccgattgg
     9241 cattaccgat cggggcgagt tggtgcttga taaagatcag tttagctaca aaacctggaa
     9301 cagcgcgcag ttagtgggaa aagtgcgagt actgcaacat attgctggtc gcacctctgc
     9361 aaaagagaaa aacgcgacgc tgattgaagc gattaaatca gcaaagttac cgcacgatcg
     9421 ttaccagacc accaccattg ttaacaccga cgacgcaatt ccgggttccg gcatgtttgt
     9481 gcgcagcagt ctggagagta ataaaaagct ttatccctgg tcgcagttta ttgtcgatag
     9541 caatggcgtc gcgcgcggtg cctggcagct ggatgaagaa agttccgctg tagtggtgct
     9601 ggataaggat ggtcgcgtgc aatgggccaa agacggggcg ctcacacagg aagaggtgca
     9661 gcaagtgatg gacctgctgc aaaagttgct caaataatgg caataacata aattctgcaa
     9721 aaataatttt cccctatcgt tatctatggg ataggggaat taggtctctg agctcttaca
     9781 ccgaactcat actggtaacg ctagttgctc ttttttaaac gcctcaatgg ttgatttata
     9841 tttctcgcaa atctcctctt cggtaatatc actatctacg gccagattcg cacttactat
     9901 cgcatccact tgttcggcta attcgacttg ttggcaacct gcattaacca gaaaattata
     9961 aataagagag taatcttcat cctccaaaac aacagaggaa ccattacgaa aacgttcatc
    10021 ccctccatag attttaagcg caaagcccaa agattctatg actatggcaa aattatcatc
    10081 aattattttt tcgtaaatat accatccatc gcattcttta attccacctc ctggtatttg
    10141 gagttcaaat ttaccccgtt ttaatttgct tactatatcc tccaataagg cataacctaa
    10201 agacacgtca ccaatcgcct ggtgaatata acctttaatc cttttcggta tgtcagactg
    10261 ttttttctgc agaatatccc aagcatacaa tcttctgttt tgttctaacg gaaattcacg
    10321 gtttttgaaa tccatgaatg agttatactc atttattgtt atggggattt cttcgtattc
    10381 aaatccactg cctcgcaatg tcattgtata ttcggcaccg ttatctttaa ggctgaaact
    10441 gataagaaac ttatccatgg ctttaacagt ttcatttttt gatgaaagca cttgataact
    10501 atctttatca atctgagttg cgcaacgaaa aaactcccac aaagttaaca ggctatcata
    10561 attcgaaacc caatcttttt tcttaaatgc atgctgaata ttattaaaaa aattgtttga
    10621 atgtgttttt gtatgcgatg attttacgaa taactccacc gcaccaataa aattattgtg
    10681 tctgatcctg ggtaacatat ggctacctta ttttatttgg ttattttatg tcgccattaa
    10741 atatctcatt atagaagtaa actatcaaaa aacgctcatt attaaaatgt aacttattag
    10801 caattgaatt tttgcacttt aaatacaatc tctttttatt tataactttt taggttggga
    10861 gaaatcagga tggcagaatc aggaaataca ctgtttctgc catctgaatt tagtaaatag
    10921 acactctgaa cccaggattc aggaacgact cgcgcggagt gtaatccagc ggtttaccct
    10981 gccagtcgtg aacgtgcgct ccggcagctg cggccacagc atgtccagcg gcggtgtccc
    11041 aaatattcgt tggtccgaag cgcgggtaca gctgcgcctg tccttccgcc accaggcaga
    11101 atttcagcga agagccgatg gacgtggtct gatgttcgcc aagctgttgc agatactctt
    11161 tcagctccgc atctgcatgg gaacggctga taaccaccag cggcgggcgc gcatcgcgga
    11221 cctgaatctg cttgcgcaca ccgcactctt ctttccaggc cttgccttct gccgcgctgt
    11281 acattacgtt cattaccggc gcatacacca cacctaaaat cggtttgcca tggtcaatga
    11341 gcgcaatgtt aacggtgaat tcgccattgc gtttaataaa ctctttagta ccatccagcg
    11401 ggtctaccag ccagtaacgc tgccagtgct gacggacttc ccaaccggga ggatcttctt
    11461 cagaaaggac cggaatatcc ggtgtcagcg tacgtaaacc gtccatgata acggtgtgtg
    11521 cggcaatatc cgctgccgtt accggagaat tgtccgcttt gctgacgacg tccatcggtt
    11581 tcgtcccgtc gtagacctgc ataatggcat cgcctgcatt ccgtgcaagc tggcatactt
    11641 gatctaacat ttctccacct cgtctctgtg agcggtgtta acttattgtt ttacttatac
    11701 cctatcgtta atgaatgcgc caactgtgat agtgtcatca ttttcaaagc gtaaaattgt
    11761 ggcattcttc actgttctat aagtaagacg tttattctcc cttttctttc gtattcccga
    11821 tgataaaagg atgtccctga tgattaagtt tagcgcaacg ctcctggcca cgctgattgc
    11881 cgccagtgtg aatgcagcga cggtcgatct gcgtatcatg gaaaccactg atctgcatag
    11941 caacatgatg gatttcgatt attacaaaga caccgccacg gaaaaattcg gactggtacg
    12001 tacggcaagc ctgattaacg atgcccgcaa tgaagtgaaa aacagcgtac tggtcgataa
    12061 cggcgatttg attcagggga gtccgctggc cgattacatg tcggcgaaag gattaaaagc
    12121 aggtgatgtt catccggttt ataaggcgct gaatacgctg gattatacgg tcggtacact
    12181 cggcaatcat gaatttaact acggtctgga ttacctgaaa aatgcgctgg cgggagcgaa
    12241 attcccttat gtaaatgcca acgtcattga cgccagaacc aaacagccaa tgtttacacc
    12301 gtatttaatt aaagataccg aagtggtcga taaagacgga aaaaaacaga cgctgaagat
    12361 tggctatatt ggcgtcgtgc cgccgcaaat catgggctgg gataaagcta atttatccgg
    12421 aaaagtgacg gtgaatgata ttaccgaaac cgtgcgcaaa tacgtgcctg aaatgcgcga
    12481 gaaaggtgcc gatgtcgttg tcgttctggc gcattccggg ctgtctgccg atccgtataa
    12541 agtaatggcg gaaaactcag tttattacct cagtgaaatt ccgggcgtta acgccattat
    12601 gtttggccat gctcacgccg ttttcccggg taaagatttt gctgatatcg aagaggctga
    12661 tatcaccaaa ggcacgctga atggtgttcc ggcggtaatg ccgggcatgt ggggcgatca
    12721 tcttggggtg gtcgacttac aactcagtaa tgacagcggt aaatggcagg tgacgcaggc
    12781 gaaagcggaa gcacggccga tttacgacat cgccaataaa aaatccctcg cggcggaaga
    12841 cagcaagctg gtagaaacac tcaaagccga tcacgatgcc acacgccagt tcgtcagcaa
    12901 gccaatcggt aaatctgccg acaatatgta tagctatctg gcgctggtgc aggacgatcc
    12961 gaccgtgcaa gtcgtgaaca acgcgcaaaa agcgtatgtc gaacattaca ttcagggcga
    13021 tccggatctg gcaaaactgc cggtgctttc agctgccgca ccgtttaaag ttggtggtcg
    13081 caaaaatgac ccggcaagct atgtggaggt ggaaaaaggc cagttgacct tccgtaatgc
    13141 cgccgatctt tatctctacc ccaatacgct gattgtagtg aaagccagcg gtaaagaggt
    13201 gaaagagtgg ctggagtgct ccgccggaca gtttaaccag attgatccta acagcacgaa
    13261 accacagtca ctcatcaact gggatggttt ccgcacttat aactttgatg ttattgatgg
    13321 tgtgaattat cagattgatg ttacccaacc cgcccgctat gacggcgagt gccagatgat
    13381 taatgccaat gcagagcgga ttaagaacct gacctttaat ggcaagccga ttgatccgaa
    13441 cgctatgttc ctcgttgcca ccaataacta tcgcgcttac ggcggcaaat ttgccggtac
    13501 gggcgacaga catatcgctt ttgcttcacc ggatgagaac cgctcggtgc tgacagcgtg
    13561 gattgctgat gagtcgaaac gtgcgggaga aattcacccg gcggcagata acaactggcg
    13621 tttagcaccg atagctggcg ataagaaact ggatatccgt ttcgaaactt ccccgtcaga
    13681 taaagccgca gcgtttatta aagagaaagg gcaatatccg atgaataaag tcgcgaccga
    13741 tgatatcggg tttgcgattt atcaggtgga tttgagtaag taaaacactt ctttttcggt
    13801 ctataaatta tcaaccgcat ccggcattta ttggcggatg cgatgctggc gcatcttatc
    13861 cgccctacca gccatgcacc gtagaccaga taagctcagc gcatccggca gttatgccgc
    13921 atgttcatcc cgcaccgcca acacctcggg caaattcaac tcaatccagt ccgccagtgc
    13981 agcaaccttt tcgctcacct gctcgcccag cggcgtgagg ctatattcca catgcggtgg
    14041 caccaccgga tacgcgatac ggttaagaaa accatcctgt tctaacgcct gtaacgactg
    14101 cgcaagcatc ttttcgctca ccccgccgat tttgcgccgc aggtcgctaa agcgatgagt
    14161 accttcgcgt agcgccacca gaatcaacac cccccaacgg ctggtgacgt gtttcaacac
    14221 ctcgcgcgac gggcactgtt ccgcaaagag attaccctct ttcagttgtt gcgacaggct
    14281 aacctgactc atttcatact tacctttttg tacgtactta ctaaaagtaa gtttaggtgt
    14341 tagcgtattt aaacacaaga caaaacgatg gagacttccc atgatcgcta ttactggtgc
    14401 cactggccaa cttggtcact atattattga atccttgatg aaaacggttc ctgccagcca
    14461 aatagtggct atcgttcgta atccggcaaa agcccaggct ctggcagcac aaggcattac
    14521 cgtgcgtcag gctgactacg gcgatgaagc cgcactgaca tctgcacttc agggagtgga
    14581 aaaactactg ctgatctctt ccagcgaagt gggtcaacgt gccccgcagc atcgtaatgt
    14641 tattaatgcc gcaaaggcgg ctggcgtgaa atttatcgct tataccagcc tgctacatgc
    14701 agatacctcc ccgctcggcc tcgccgatga gcacattgag acggagaaaa tgttggctga
    14761 ttctggcatc gtttacaccc tgctgcgcaa cggctggtac agcgaaaact acctcgccag
    14821 cgccccggca gcactggaac acggcgtatt tatcggtgcg gcgggcgatg gcaaaatcgc
    14881 ctcagcaacg cgggcagatt atgcggcagc tgcggcacgc gtgattagcg aagccggtca
    14941 cgaaggcaag gtttacgaac tggcgggcga tagtgcctgg acgttgacac agttagcggc
    15001 agagctgacc aaacagagcg gcaaacaggt tacctatcaa aatctgagcg aagccgattt
    15061 cgccgcggca ctgaaaagcg tcggactgcc cgacggactg gcggatatgc tggcggattc
    15121 tgacgttggc gcatcgaaag gtggtctgtt tgataacagc aaaacgctta gcaaattgat
    15181 tggccgccca acgacaacgt tagccgaaag cgtaagccat ctttttaatg ttaataacta
    15241 gttaattaaa gtggcatcct cccgcatcct ctctaataat gacgggatgc cgggagcaat
    15301 catgtctgct tcctgaactt tcttctgaca gaccaatgga tgccagtaat gattagcggc
    15361 gtgctgtacg ccctgttagc agggttgatg tgggggctta tttttgtcgg gccgttgatc
    15421 gtaccggaat acccggcgat gttgcagtcg atggggcgtt atctggcgtt agggttaatt
    15481 gcgctgccca ttgcctggct gggacgcgtg cgtctgcgtc agttggcgcg tcgcgactgg
    15541 cttaccgcct tgatgctcac tatgatgggc aacctcatct attacttctg ccttgccagt
    15601 gccattcaac gtactggtgc gcctgtttcc acgatgatta tcggcaccct gccggtggtg
    15661 attcccgttt ttgccaatct gctttatagc cagcgcgacg gcaaactcgc gtggggaaaa
    15721 ctcgccccgg cactggtttg tattggcatc ggcctggcgt gtgtgaatat tgctgagtta
    15781 aaccacggac tccccgattt tgactgggca cgttatacct caggcatcgt gctagcgtta
    15841 gtttccgtgg tctgctgggc atggtatgcc ctgcgcaacg cccgctggct gcgggagaat
    15901 cccgacaaac atccgatgat gtgggcgacg gcgcaggcgc tggtcacact gccggtttct
    15961 ctcatcggct atctcgtcgc ctgttactgg ctgaatacgc aaacgccgga cttctcccta
    16021 ccttttggcc cccgtccgct ggtgtttatt agtctgatgg ttgcgatagc cgtgctttgc
    16081 tcatgggttg gcgcactctg ctggaacgtc gccagccagc gattaccgac agtgattctc
    16141 gggccgctga tcgttttcga aacactggca ggtttgctgt acaccttttt gatacgccag
    16201 caaatgccgc cgctgatgac gctgagcggt atcgcgctgt tagtggttgg cgtggtcatt
    16261 gtagtcagag caaaaccgga aaagccttta actgaatctg tctcagaaag ttgacatact
    16321 ggctgtgagt taaataagcc tctgctacgt aagggttata gcttttgcct taaagatgta
    16381 tttaaaatac atcttatctt attaagaatg aggtatcagc tatggcttat cgcgaccaac
    16441 ctttaggtga actggcgctc tctattcctc gcgcttcagc tctgtttcgt aaatataata
    16501 tggattactg ctgtggcggt aagcagacgc tggcgcgcgc ggcggcacgt aaagaactgg
    16561 atgttgaggt cattgaagct gaactggcaa agcttgctga acaaccgatt gagaaagact
    16621 ggcgtagcgc cccgctggca gaaatcattg accatatcat cgtgcgctac cacgatcgtc
    16681 accgcgagca actgccggag ctgatcctgc aagcgactaa agtcgagcgc gttcacgccg
    16741 acaaaccgag cgtgccaaaa gggctgacaa aatacctgac catgctgcat gaagagcttt
    16801 ccagccacat gatgaaagaa gagcagatcc tcttcccgat gatcaaacaa ggcatgggca
    16861 gccaggcaat ggggccaatc agcgtaatgg aaagcgagca cgatgaagcg ggcgaactgc
    16921 tggaagtgat caaacacact accaataacg tcacaccgcc gccagaagcc tgcaccacct
    16981 ggaaagcgat gtataacggc attaatgaac tgattgatga cctgatggat cacatcagtc
    17041 tggaaaacaa tgtactgttc ccacgcgcgc tggcgggtga gtgatctaaa agctggatgg
    17101 cattgcgcca tccagcatga taatgcggtt atttccgcag ttcagcagcc cgcttcttac
    17161 caataaacaa ccagcccagc cccagtgcga taaaccacag cggggtaacc agcagcgcct
    17221 ggcgagtgtc atcttccagt gtcagcaaca cgaccacgaa cacaaagaac gccatacata
    17281 cccagcacat cagcttgccg agcggcatct tgtagatcga cttctcatgc agatgaggac
    17341 gctgtttgcg gtacaccagg tacgagcaaa ggataatcgt ccagacgaac ataaacagaa
    17401 tcgcggaaac ggttgtaatc atcgtgaacg caccaatcac gctaggattc acatacagca
    17461 tcaccacgcc accgagcagg cagatgcagg agaaggtcag ccctttcgct ggtactgcgc
    17521 gcttagaaag tttagcgaac gctttcggtg ccacaccttc ctgcgccaga ccaaacagca
    17581 tacggctggt agagaagacg ccgctgttag cggaagacgc cgcagaggtc agcaccacaa
    17641 agttgatcac gctggcagcc gcaggcaaac ctaccaacac aaacagctca acgaacgggc
    17701 ttttctccgg gactaccgaa ctccacggtg tcacggacat aatcacaatc agcgcgaaga
    17761 cgtagaacat aatgatacgg atcggaatgg agttaatcgc gcgtggcagt gatttctccg
    17821 gatctttggt ttccgcagct gttgtaccta ccagctcaat ccccacgaaa gcgaaaaccg
    17881 ctatctggaa tccggcaaag aagccactta aacctttcgg gaaccagccg ccgtcattcc
    17941 acaaatgcgc gaatgacgct tccacaccag tcggtgactg aaagtgcatc gccaccatga
    18001 ccaggccgac gacaatcagc gacacgatgg cgacgatttt gatcatcgca aaccagaact
    18061 ccatctcacc gaacattttc acggtggcaa ggttgagcgt cagcagcagc actatcaccg
    18121 ccagcgaggc gacccagtcg gagagatcgg ggaaccagaa ctgagcataa gccgtgatcg
    18181 ccaccacgtc tgccataccg gttacaaccc agcagaacca gtaagtccag ccagtgaaat
    18241 atcctgtcca cggcccgagt aaatcggaag cgaagtcact aaaagatttg tattccagat
    18301 tcgaaagcag caattccccc attgcccgca tcacgaaaaa gagcataaaa ccaatgatca
    18361 tataaacgaa aatgatcgac ggcccggcaa ggctaatcgt tttgccagac cccagaaaca
    18421 accccgtacc aatggcaccg ccaatggcaa taagctgaat atgtcggttt gtgagattgc
    18481 gccgtagcga ctgttcagcc ggagcctgat catcggcaac gacttttacc tgatctacca
    18541 tgtttttttc ttcctgtacc tgtctgtgtt gttcaggctc tacggccttt agtcagtcta
    18601 tgatacgacg aatctgtatc gggactcatc gatattaggt aacaatacgc gggatgaata
    18661 ctaagattta gatctaatgt taattttatg tttaaagtga gtgtcatatc acggtgataa
    18721 cgcgaaacat ctcacaaaaa tacacgctta cggggtcttt gcaacacaaa atagcgccgt
    18781 ttggcaaact gaagggttta ttgctgaatg cctgctcccc tctggttcga ggggaacaga
    18841 atgcgctgct tagaggattt ccagcagttc gacttcaaac accagggtgc tgaacggagg
    18901 gatggatgca cctgcgccgc gctcgccata tgccagttcc tgcgggatag tcagttccca
    18961 tttagaacct accggcatca gagtcagtgc ttcaatccag ccagggatca cgccgttaac
    19021 cgggaattca gcgggttcac cacgagcaac ggagctgtca aacacggtgc cgtcgatcag
    19081 tttaccggtg taatgaacac gaacgcggtc ggtacgtgcc ggaattgcgc cttcaccctg
    19141 gttgatcacg cggaattgca ggccagattc ggtgctattc acaccttctt ttttggcgtt
    19201 ttcttccagg tatttcacac cttcagcagc catcgcctgg aaacgctgac gacgaacggc
    19261 atcggcgcgt tcgtggattt cacgcagcgc gcgatgcacc acatcaaccg gaacagccgg
    19321 atgtttgcct tccagcgcat cggcaatacc tgcaaccagt gcttctggca gcagcccttc
    19381 caggccagat tcactcagtt gttgccctac ctgcaaacca atgccgtagc ttgcttgcgc
    19441 ttcgatggtg tcaaaagttg gggtggtcat cgtatttcct ttcttagggt ataaaagtag
    19501 cgggcagcat atcagccaca cttctttggg taaaactttg tcacaggaat gatgacaaat
    19561 cccggggaaa aagaaacaat agcaatatcc cg
//
LOCUS       DADMJE010000070        19423 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.071, whole genome shotgun sequence.
ACCESSION   DADMJE010000070 DADMJE010000000
VERSION     DADMJE010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19423
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.071"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(260..1018)
                     /locus_tag="JN001_002216"
     CDS             complement(260..1018)
                     /locus_tag="JN001_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HAY9053440.1"
                     /translation="MSQILLQPANAMITLENVHKWYGQFHVLKNINLTVQPGERIVLC
                     GPSGSGKSTTIRCINHLEEHQQGRIVVDGIELNEDIRNIERVRQEVGMVFQHFNLFPH
                     LTVLQNCTLAPIWVRKMPKKEAEALAMHYLERVRIAEHAHKFPGQISGGQQQRVAIAR
                     SLCMKPKIMLFDEPTSALDPEMVKEVLDTMIGLAQSGMTMLCVTHEMGFARTVADRVI
                     FMDRGEIVEQAAPDEFFTHPKSERTRAFLSQVIH"
     gene            complement(1026..2129)
                     /locus_tag="JN001_002217"
     CDS             complement(1026..2129)
                     /locus_tag="JN001_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709065.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HAY9053441.1"
                     /translation="MTKVLLSQPSRPASHNSSRAMVWVRKNLFSSWSNSLLTIGCIWL
                     MWELIPPLLNWAFLQANWVGSTRADCTKAGACWVFIHERFGQFMYGLYPHDQRWRINL
                     VLLIGLVSIAPMFWKILPHRGRYIAVWAVIYPLIVWWLMYGGFFGLERVETRQWGGLT
                     LTLIIASVGIAGALPWGILLALGRRSHMPIVRILSVIFIEFWRGVPLITVLFMSSVML
                     PLFMAEGTSIDKLIRALVGVILFQSAYVAEVVRGGLQALPKGQYEAAESLALGYWKTQ
                     GLVILPQALKLVIPGLVNTIIALFKDTSLVIIIGLFDLFSSVQQATVDPAWLGMSTEG
                     YVFAALIYWIFCFSMSRYSQHLEKRFNTGRTPH"
     gene            complement(2139..3309)
                     /locus_tag="JN001_002218"
                     /pseudo
     CDS             complement(2139..3309)
                     /locus_tag="JN001_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026209.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
     gene            complement(3377..4450)
                     /locus_tag="JN001_002219"
     CDS             complement(3377..4450)
                     /locus_tag="JN001_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312168.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9053442.1"
                     /translation="MKKMMIATLAAASVLLAVANQAHAGATLDAVQKKGFVQCGISDG
                     LLGFSYADADGKFSGIDVDVDVDVDVDVDVDVDVDVCRSVAAAVFGDDTKVKYTPLTA
                     KERFTALQSGEVDLLSRNTTWTSSRDAGMGMAFTGVTYYDGIGFLTHDKAGLKSAKEL
                     DGATVCIQAGTDTELNVADYFKANNMKYTPVTFDRSDESAKALESGRCDTLASDQSQL
                     YALRIKLSNPAEWIVLPEVISKEPLGPVVRRGDDEWFSIVRWTLFAMLNAEEMGINSQ
                     NVDEKAANPATPDMAHLLGKEGDYGKDLKLDNKWAYNIIKQVGNYSEIFERNVGSESP
                     LKIKRGQNNLWNNGGIQYAPPVR"
     gene            complement(4881..5102)
                     /locus_tag="JN001_002220"
     CDS             complement(4881..5102)
                     /locus_tag="JN001_002220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053443.1"
                     /translation="MKRLIPVALLTALLAGCAHDSPCVPVYDDQGCLVHTNTCMKGTT
                     QDNWETAGAIAGGAAAVAGLTMGIIALSK"
     gene            complement(5355..8459)
                     /gene="acrF"
                     /locus_tag="JN001_002221"
     CDS             complement(5355..8459)
                     /gene="acrF"
                     /locus_tag="JN001_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit AcrF"
                     /protein_id="HAY9053444.1"
                     /translation="MANFFIRRPIFAWVLAIILMMAGALAILQLPVAQYPTIAPPAVS
                     VSANYPGADAQTVQDTVTQVIEQNMNGIDNLMYMSSTNDSAGSVTITLTFQSGTDPDI
                     AQVQVQNKLQLATPLLPQEVQQQGISVEKSSSSYLMVAGFVSDNPGTTQDDISDYVAS
                     NVKDTLSRLNGVGDVQLFGAQYAMRIWLDADLLNKYKLTPVDVINQLKVQNDQIAAGQ
                     LGGTPALPGQQLNASIIAQTRLKNPEEFGKVTLRVNSDGSVVRLKDVARVELGGENYN
                     VIARINGKPAAGLGIKLATGANALDTAKAIKAKLAELQPFFPQGMKVLYPYDTTPFVQ
                     LSIHEVVKTLFEAIMLVFLVMYLFLQNMRATLIPTIAVPVVLLGTFAILAAFGYSINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVMMEDKLPPKEATEKSMSQIQGALVGIAMVLS
                     AVFIPMAFFGGSTGAIYRQFSITIVSAMALSVLVALILTPALCATLLKPVSAEHHENK
                     GGFFGWFNTTFDHSVNHYTNSVGKILGSTGRYLLIYALIVAGMVVLFLRLPSSFLPEE
                     DQGVFLTMIQLPAGATQERTQKVLDQVTDYYLKNEKANVESVFTVNGFSFSGQAQNAG
                     MAFVSLKPWEERNGDENSAEAVIHRAKMELGKIRDGFVIPFNMPAIVELGTATGFDFE
                     LIDQAGLGHDALTQARNQLLGMAAQHPASLVSVRPNGLEDTAQFKLEVDQEKAQALSV
                     SLSDINQTISTALGGTYVNDFIDRGRVKKVYVQADAKFRMLPEDVDKLYVRSANGEMV
                     PFSAFTTSHWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGY
                     DWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLA
                     ATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDLMEKEGKGVVEATLMAVRMRLR
                     PILMTSLAFILGVLPLAISNGAGSGAQNAVGIGVMGGMVSATLLAIFFLPVFFVVIRR
                     CFKG"
     gene            complement(8471..9628)
                     /gene="acrE"
                     /locus_tag="JN001_002222"
     CDS             complement(8471..9628)
                     /gene="acrE"
                     /locus_tag="JN001_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter periplasmic
                     adaptor subunit AcrE"
                     /protein_id="HAY9053445.1"
                     /translation="MTKHARFFLLPSFILISAALIAGCNDKGEEKAHVGEPQVTVHIV
                     KTAPLEVKTELPGRTNAYRIAEVRPQVSGIVLNRNFTEGSDVQAGQSLYQIDPATYQA
                     NYNSAKGELAKSEAAAAIAHLTVKRYVPLVGTKYISQQEYDQAIADARQADAAVIAAK
                     GTVESARINLAYTKVTAPISGRIGKSTVTEGALVTNGQTTELATVQQLDPIYVDVTQS
                     SNDFMRLKQSVEQGNLHKENATSNVELVMENGQTYPLKGTLQFSDVTVDESTGSITLR
                     AVFPNPQHTLLPGMYVRARIDEGVQPDAILIPQQGVSRTPRGDATVLIVNDKSQVEAR
                     PVVASQAIGDKWLISEGLKSGDQVIVSGLQKARPGEQVKATTDTPADTASK"
     gene            10027..10689
                     /gene="acrS"
                     /locus_tag="JN001_002223"
     CDS             10027..10689
                     /gene="acrS"
                     /locus_tag="JN001_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux transporter transcriptional
                     repressor AcrS"
                     /protein_id="HAY9053446.1"
                     /translation="MAKRTKAEALKTRQELIETAIAQFAQHGVSKTTLNDIADAANVT
                     RGAIYWHFENKTQLFNEMWLQQPSLRELIQEHLTAGLEHDPFQQLREKLIVGLQYIAK
                     IPRQQALLKILYHKCEFNDEMLAEGVIREKMGFNPQTLREVLQACQQQGCVANNLDLD
                     VVMIIINGAFSGIVQNWLMNMAGYDLYKQAPALVDNVLRMFMPDENITKLIHQTNELS
                     VM"
     gene            complement(10692..10871)
                     /locus_tag="JN001_002224"
     CDS             complement(10692..10871)
                     /locus_tag="JN001_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2556 domain-containing protein"
                     /protein_id="HAY9053447.1"
                     /translation="MIRKYWWLVVFAVFVFLFDTLLMQWIELLTTETDKCRNMNSVNP
                     LKLVNCDELNFQDRM"
     gene            complement(10955..11839)
                     /gene="yhdJ"
                     /locus_tag="JN001_002225"
     CDS             complement(10955..11839)
                     /gene="yhdJ"
                     /locus_tag="JN001_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417728.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine-specific DNA-methyltransferase"
                     /protein_id="HAY9053448.1"
                     /translation="MRTGCEPTRFGNEAKTIIHGDALAELKKIPAESVDLIFADPPYN
                     IGKNFDGLIEAWKEDLFIDWLFEVIAECHRVLKKQGSMYIMNSTENMPFIDLQCRKLF
                     TIKSRIVWSYDSSGVQAKKHYGSMYDPILMMVKDAKNYTFNGDAILVEAKTGSQRALI
                     DYRKNPPQPYNHQKVPGNVWDFPRVRYLMDEYENHPTQKPEALLKRIILASSNPGDII
                     LDPFAGSFTTGAVAVSSGRKFIGIEINSEYIKMGLRRLDVASHYSAEELAKVKKRKTG
                     NLSKRSRLSEVDPDLIAK"
     gene            complement(11925..12221)
                     /gene="fis"
                     /locus_tag="JN001_002226"
     CDS             complement(11925..12221)
                     /gene="fis"
                     /locus_tag="JN001_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator Fis"
                     /protein_id="HAY9053449.1"
                     /translation="MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNG
                     QDVNDLYELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN"
     gene            complement(12247..13212)
                     /gene="dusB"
                     /locus_tag="JN001_002227"
     CDS             complement(12247..13212)
                     /gene="dusB"
                     /locus_tag="JN001_002227"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HAY9053450.1"
                     /translation="MRIGQYQLRNRLIAAPMAGITDRPFRTLCYEMGAGLTVSEMMSS
                     NPQVWESDKSRLRMVHIDEPGIRTVQIAGSDPKEMADAARINVESGAQIIDINMGCPA
                     KKVNRKLAGSALLQYPDVVKSILTEVVNAVDVPVTLKIRTGWAPEHRNCEEIAQLAED
                     CGIQALTIHGRTRACLFNGEAEYDSIRAVKQKVSIPVIANGDITDPLKARAVLDYTGA
                     DALMIGRAAQGRPWIFREIQHYLDTGELLPPLPLAEVKRLLCAHVRELHDFYGPAKGY
                     RIARKHVSWYLQEHAPNDQFRRTFNAIEDASEQLEALEAYFENFA"
     gene            complement(13541..14422)
                     /gene="prmA"
                     /locus_tag="JN001_002228"
     CDS             complement(13541..14422)
                     /gene="prmA"
                     /locus_tag="JN001_002228"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HAY9053451.1"
                     /translation="MPWIQLKLNTTGANAEDLSDALMEAGAVSITFQDTHDTPVFEPL
                     PGETRLWGDTDVIGLFDAETDMNDVVAILENHPLLGAGFAHKIEQLEDKDWEREWMDN
                     FHPMRFGERLWICPSWRDVPDENAVNVMLDPGLAFGTGTHPTTSLCLQWLDSLDLTGK
                     TVIDFGCGSGILAIAALKLGAAKAIGIDIDPQAIQASRDNAERNGVSDRLELYLPKDQ
                     PEEMKADVVVANILAGPLRELAPLISVLPVSGGLLGLSGILASQAESVCEAYADSFAL
                     DPVVEKEEWCRITGRKN"
     gene            complement(14434..15885)
                     /gene="panF"
                     /locus_tag="JN001_002229"
     CDS             complement(14434..15885)
                     /gene="panF"
                     /locus_tag="JN001_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/pantothenate symporter"
                     /protein_id="HAY9053452.1"
                     /translation="MQLEVILPLVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMG
                     GIVLAMTLTATYISASSFIGGPGAAYKYGLGWVLLAMIQLPAVWLSLGILGKKFAILA
                     RRYNAVTLNDMLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYET
                     GLLIFGISIALYTAFGGFRASVLNDTMQGLVMLIGTVVLLIGVVHAAGGLSNAVETLQ
                     TIDPQLVTPQGADDILSPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIG
                     TIVVAILMFGMHLAGALGRAVIPDLTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMS
                     TINAQLLQSSATIIKDLYLNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMI
                     IWLNLLAFGGLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFH
                     PIVPSLLLSLLAFLVGNRFGTSVPQATVLTTDK"
     gene            complement(15875..16117)
                     /locus_tag="JN001_002230"
     CDS             complement(15875..16117)
                     /locus_tag="JN001_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhdT family protein"
                     /protein_id="HAY9053453.1"
                     /translation="MDTRFVQAHKEARWALGLTLLYLAVWLAAAYLPDVAPGFTGFPR
                     WFEMACILTPLLFIGLCWAMVKFIYRDIPLEDDDAA"
     gene            complement(16210..17145)
                     /locus_tag="JN001_002231"
     CDS             complement(16210..17145)
                     /locus_tag="JN001_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001446002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9053454.1"
                     /translation="MGELLAEFLSRNPHQKFTQPGEFIGPFPSGAPAIFAAQVAKLSH
                     RAIFFGCVGNDDFGRLIIERLRHEGVITDGIHVMNNAVTGTAFVSYQNPQQRDFVFNI
                     PNSACGLFTAEHIDKDLLKQCNHLHIVGSSLFSFRMIDVMRKAITTIKSAGGTVSFDP
                     NIRKEMLSIPEMAQALDYLIEYTDIFIPSESELPFFARHKNLSEEQIVSDLLHGGVKH
                     VAIKRAQRGASYYKLKNGTLHAQHVTGHDIEIIDPTGAGDCFGATFITLFLSGFPAHK
                     ALQYANASGALAVMRQGPMEGISSLADIEDFLQQH"
     gene            complement(17177..18007)
                     /locus_tag="JN001_002232"
     CDS             complement(17177..18007)
                     /locus_tag="JN001_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000843961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY9053455.1"
                     /translation="MKSVNVPRKSSNLLKRRLKIAEIVATQGEIKVDDLSAQLGVSGV
                     TIRGDLSYLEQQGYLKRSFGGAIATPLSSEPEAIQPIAPLSLAQQMEIARHCARLIRD
                     RDTLFLGHGTICRKIIPLLSEVKKLRLITNDPEHALLANQFIDGEIILAGSEMLRPDT
                     ALAGKPLEQALQHFTITHSILEINHLDADGTLNINVPRLAAAWQLCFDHAQNKTVIVA
                     ADPAPSTAAIGHLHQAENVIVSRSINEQYQQQLQSADFVILYTSNECFTWSNRERLQE
                     "
     gene            18350..19204
                     /locus_tag="JN001_002233"
     CDS             18350..19204
                     /locus_tag="JN001_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000275530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose bisphosphate family class II aldolase"
                     /protein_id="HAY9053456.1"
                     /translation="MYIISSKNMLKKAQSEGYAVPAFNIHNLETLQVVVESAAQLRSP
                     VMLAGTPGTYRYGGVGSLISLVQSLAREYNLPLVLHLDHHEESDDIFNKVRAGIRSVM
                     IDGSHLPFEDNIARVQEVTTFCHRFDVSVEAELGRLGGQEDDLLVDEKDSAYTSPAAA
                     AEFVQRTQIDSLAVAIGTAHGLYAHEPRLDFVRLEQIRQRVEIPLVLHGASGLSEQDV
                     QHCIRRGICKVNVATELKIAFADALKGYFYNNPAANDPRHYMQPAKAAMKEVVTRIIG
                     VCGSEGKI"
     gene            19240..>19423
                     /locus_tag="JN001_002234"
     CDS             19240..>19423
                     /locus_tag="JN001_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053457.1"
                     /translation="MKNIKLLGSAMLVSLALFSQNSLAKEYKIGASLLTQQHPFYIDL
                     ANAMKEEAKKDNVNLSV"
BASE COUNT         5174 a         4864 c         4619 g         4766 t
ORIGIN      
        1 cccatgcgag agtagggaac tgccagacat caaataaaac aaaaggccca gtcttccgac
       61 tgagcctttt gttttatctg ttgtttgtcg gtgaacactc tctcgagtag gacaaatccg
      121 ccgggagcgg atttgaacgt tgcgaagcaa cggcccggag ggtggcgggc aggacgcccg
      181 ccataaactg ccagacatca aatcaagcaa aaaggccatc cgaaaggatg gcctttttgc
      241 ttttcgaact aacattcaat taatggatta cctgcgataa aaatgccctc gtacgctctg
      301 atttaggatg cgtaaaaaat tcatcaggtg cagcttgttc cactatctcc ccacgatcca
      361 taaaaattac ccggtcagcg acggtacgtg caaaccccat ctcatgtgtt acacacaaca
      421 ttgtcatacc cgactgcgcc agcccaatca tcgtatccag cacctctttc accatctccg
      481 gatcgagcgc cgacgttggt tcatcaaaca acataatttt cggcttcata cacagcgaac
      541 gcgcaatggc aacgcgttgc tgctgaccac ctgaaatctg tccgggaaac ttatgcgcat
      601 gttcggcaat tctcacccgc tcaaggtaat gcatcgccag agcttcagcc tctttcttag
      661 gcatcttgcg tacccaaatc ggtgccaggg tacagttctg taaaacggtc agatgaggga
      721 agagattgaa atgctgaaat accattccca cttcttgcct gacgcgctca atattgcgga
      781 tatcttcatt aagttcgatg ccatctacga caatccgtcc ctgttgatgt tcttccagat
      841 gattaataca acgaatggtt gtcgatttac cggaaccaga agggccacac agaacgatcc
      901 gttctcccgg ttgcacggtt aaatttatat ttttcaaaac atggaattgt ccataccatt
      961 tatggacgtt ttccagcgta atcatcgcgt tagcaggttg cagtaaaatt tggctcatag
     1021 tgtcctcaat gcggtgtacg cccggtgtta aaacgttttt ccagatgttg gctataacgt
     1081 gacatgctga aacaaaagat ccagtagatc agcgcggcga aaacataccc ttccgtcgac
     1141 atacccaacc aggcgggatc aacggttgcc tgctgaacgc tactgaaaag atcgaacaag
     1201 ccgatgatga tcaccaggct ggtatctttg aagagtgcga tgatggtatt taccagccca
     1261 ggaattacca gcttcaacgc ctgtggcaga ataaccagcc cctgagtttt ccagtacccc
     1321 aacgccagcg actctgccgc ttcatattgc cctttaggta gggcctgtaa tccgcctcgc
     1381 acgacttccg caacatatgc tgactgaaac aggatcacgc caaccagcgc gcggatcagt
     1441 ttgtcgatac tggtgccttc tgccataaac aacggcagca tgaccgaaga cataaacaat
     1501 acggtaatca gcggtacgcc gcgccagaac tcgataaaaa tgaccgataa gatacgcaca
     1561 atcggcatat gggagcggcg acctaacgcc agtaagatcc cccacggtag cgcccccgca
     1621 atcccaacgg atgcaataat taaagttagc gtcagcccgc cccattgccg ggtttcaacc
     1681 cgctcaagac caaaaaaacc gccatacatc agccaccaga caatcagtgg gtaaatcacc
     1741 gcccagaccg caatatagcg accgcgatgc gggagtattt tccagaacat tggtgcgatt
     1801 gacacaaggc caatcagtaa taccaggtta attcgccagc gttggtcgtg tgggtaaagt
     1861 ccatacataa actgaccaaa tcgttcgtgg atgaagaccc aacaggcacc ggcttttgtg
     1921 cagtcggcac gcgttgagcc aacccagtta gcctgcaaaa atgcccagtt cagcaacggt
     1981 gggatcagtt cccacatcaa ccatatgcag ccaatagtca gcaggctatt gctccagctg
     2041 gagaacagat tttttcgcac ccacaccatc gcgcggcttg agttatggct cgctgggcgc
     2101 gagggctgag acagcaatac ttttgtcatc atgactcctt agcgttcaac gatcgcgatg
     2161 cggcggttat agatattcat cagcagcgag atagtcaggc tgataatcag atagaccgac
     2221 atggtcatgg ctatcgtctc gatggcttgc cccgtctggt tcagcacggt gccagcaaac
     2281 agcgaaacca tatcgggata gccaatagcg gcggcaagag aggagttttt gacgatgttg
     2341 agatactggc tggttaacgg cggaataatc actcgcagtg cctggggaat aatgacctgg
     2401 cgtagcgtaa ccccagtgac cgagccgctt catgttgacc ataaggcact gcctggatcc
     2461 cagcgcggat aatctcggcg ataaatgcag aggtataaac cgaaagtgcc agcgttaagg
     2521 ctgccagttc aggaattaaa accattccgc cgcggaagtt aaagcctcgt agggctggga
     2581 catcccagtg tagtgctgcg ccaaaaagcc attgcgccag taaaggcaaa ccgatgatca
     2641 acactgcggc gaacggccag gtgcggcgca gttgtccggt ctttatctgg tatgttttat
     2701 taaagcggaa tagcccaaca gaaaggacta tagccataac aacagccagg ataaacgcaa
     2761 taaatccgtc tcccagctgc ggtgacggaa tataaagccc acgattgctc aaaaaggcca
     2821 gatcaaacgc gctcacagcc tggcgcgtgg tccgggcaaa ttgcgcaaca cggcaaagta
     2881 ccagaagaag atttgcagca gcgggggaat attacggaag atctcaatat aaattgtgga
     2941 tagctttcgt agcagtcagt tatccgaaag tctcgtcaga ccgataaaga agcctaaaac
     3001 agaagcgaac acaatacaca atgcagaaac cagtagcgta ttgagtaagc cgacaataaa
     3061 aacgcgtccg taggtgtcgc cctgctggta atcgatcaaa tgctggacaa taccgaagcc
     3121 agcgccgcga tccagaaagg caaaacctga agtaatgcca cgattactga gattcgttac
     3181 agtgttgtga aataaccaac caacaattcc gacaacagca acaacggcaa ggatctggaa
     3241 taaccaggca cgaaccgtag ggttggcaaa ggagagtgag cctttaacgg ttgagcggcg
     3301 atgagacata gaaacctcgg aaagcataac gctgaagaga gcgccgccgt agcgacgctc
     3361 gttacctcac accgacttaa cgcacgggcg gcgcgtactg aataccgccg ttattccaga
     3421 gattattttg cccacgttta attttcagcg ggctttctga acctacgtta cgctcgaaaa
     3481 tttccgagta gttacccacc tgtttgatga tgttataggc ccatttatta tccaacttca
     3541 gatccttgcc gtaatcgcct tctttaccca gcagatgtgc catatcaggc gttgctggat
     3601 tagccgcttt ttcatcgacg ttctgggaat tgatgcccat ctcttcagca ttcagcatgg
     3661 cgaaaagcgt ccagcgtaca atcgagaacc attcatcatc gccacgacga actaccggcc
     3721 caagcggttc tttagagata acctccggta agacaatcca ttcagctggg ttgcttaatt
     3781 tgatgcgcag ggcatacagt tgcgactgat ccgaggccag cgtatcgcag cgaccagatt
     3841 ccagtgcctt cgctgattcg tcagagcgat cgaaagtcac cggtgtgtac ttcatattgt
     3901 ttgccttgaa atagtcggca acgttgagtt cggtatcagt acccgcctga atacagacgg
     3961 tagcgccatc cagttctttc gcgcttttta gccccgcttt atcgtgcgtc aggaagccaa
     4021 tgccgtcgta ataagtgacg ccagtaaatg ccattcccat cccggcgtcg cgagatgaag
     4081 tccaggtcgt attacgggag agcaaatcca cttcccctga ctgtaaagcc gtgaagcgtt
     4141 cttttgctgt gagtggggta tatttcactt tcgtgtcgtc accaaataca gcagcggcaa
     4201 cactacgaca aacatcaaca tcaacatcaa catcaacatc aacatcaaca tcaacatcaa
     4261 catcaacatc aatacctgaa aacttaccgt ctgcatcggc ataagagaac ccaagtaatc
     4321 catcactgat cccgcattgc acaaaacctt ttttctgaac ggcatcaagc gtcgcgccag
     4381 catgcgcctg atttgcaacg gcaagcagca cgctggcggc agccagtgtg gctatcatca
     4441 tctttttcat aatgcttcct gtgaggcgaa aattatcgtt ataggacgtt tgggaaacgt
     4501 cttttacctg tctgtggcca tcctcttata agcaaaagta gtgccagctt ttgcgcacga
     4561 tttcgcgtcg caataagctg agtgtagaca ggaaataata aaaacagcgc cccgcaatgg
     4621 tgcgaaaatg aaacatgcgc cacattttgg cgcaaaatat ttacgcgtgt tttactaagc
     4681 agaataatga ttgttagcgt gagaatattt ctggtgggaa gtgtgaaagt taaattgatg
     4741 cgttatttcg aaagcagcga aataacgcga tataacatgc taaatcagca gagaattagc
     4801 cagcagaata tagcaatatt ttatcttatg taaagatact gtatcgttaa acagagcgcg
     4861 aaactccgcg ccctgttcag ttatttcgac agagcgatga tccccatcgt caggccagca
     4921 acagccgctg ccccgccggc aatagcccca gccgtttccc agttatcctg agtcgtgcct
     4981 ttcatacagg tattggtgtg aaccagacaa ccctgatcgt cataaaccgg aacgcagggc
     5041 gaatcgtgag cacagcccgc cagcaatgcg gtgagcaatg ccacaggaat taatcttttc
     5101 atggtgttac ctcagtaata aacgctaacg cttaataagt taactctctt attaacgagc
     5161 tgaatgccat tttatcaccg gaggttataa atattgcgga atgaataatg acaaattatg
     5221 tgaattgtaa aaatagtgaa gggagcggga actatagaaa gtttttaaag agtgagtgga
     5281 agaatatctt attaattttt atgggtttca ctgaaaataa taaaggcacc cgaaagtgcc
     5341 tttatgtttc tgatttatcc tttaaagcaa cggcggatca ccacaaagaa caccggtagg
     5401 aagaagattg ccagcaacgt tgcagagacc attccgccca ttaccccgat acccactgcg
     5461 ttctgcgcgc cactgcctgc accgttactg atagctagcg gtaatacgcc gagaataaag
     5521 gcgagagagg tcatcaggat aggacgcaga cgcatacgta ctgccattag tgtcgcttca
     5581 acaacacctt taccctcttt ctccatgaga tctttagcga actcaacaat caaaatagcg
     5641 tttttggccg acaagccaat tgtcgttagc aagcccacca taaagtagac gtcatttttt
     5701 tgattaaaga gtgtcgccgc cagcagcacg ccgacaatcc ctaacggcac gaccaacata
     5761 accgagacag gaattgacca gctttcatag agtgcagcaa ggcacaggaa aacaaccaca
     5821 aaggaaattg ctactagagc gggagcctgg tttcccgata agcgttcctg atacgacata
     5881 cccgtccagt cataaccaat gcccgcaggt aattttgacg caaggttttc catcaacgcc
     5941 atggcatcgc cggaactggt tcctggcgcg gcttccccct gaatctccat tgacggcaga
     6001 ccgttgtagc gttccagtcg cggagagcca tacacccaat gtgaagtggt aaaggccgag
     6061 aatggcacca tttcgccgtt ggcgctgcgg acataaagtt tatcgacatc ttctggcagc
     6121 atacggaatt tggcatccgc ctgaacatac acctttttca cgcgaccacg gtcgatgaag
     6181 tcgttaacgt aagtcccacc caacgccgtt gaaatggtct gattgatgtc agaaagtgaa
     6241 acacttaatg cctgcgcctt ttcctggtca acttccagtt taaactgcgc ggtgtcttcc
     6301 aggccattag gacgcacgct gactaagctg gcaggatgtt gcgccgccat accaagcaac
     6361 tggttacggg cctgggttag ggcatcgtga cccagcccag cctgatcaat taactcaaag
     6421 tcgaaacccg ttgccgtgcc cagttcaaca atggctggca tattgaatgg aatgacaaaa
     6481 ccgtcgcgga tcttgcccaa ttccattttg gcacgatgga ttaccgcttc cgcactgttt
     6541 tcatcaccat tacgctcttc ccacggtttc agactgacga aggccatacc ggcgttttgt
     6601 gcctggccgc tgaagctaaa gccgttaacc gtaaagacac tttcaacgtt cgctttctcg
     6661 ttcttcagat agtaatccgt cacttgatcc aacacttttt gcgtccgctc ttgcgtcgcg
     6721 ccagcgggta actgaatcat ggtcagaaag acaccctgat cctcttcagg taagaaggaa
     6781 gacggaagac gtaaaaacaa caccaccatt cctgcaacaa tcagcgcata gatcagtaaa
     6841 tatcgtcctg tggaaccgag gattttgccg acgctgttgg tgtagtggtt aacgctatga
     6901 tcgaaggtgg tattaaacca gccgaagaaa ccgcccttat tttcgtgatg ctcagcagag
     6961 acgggtttaa gcagcgttgc acataacgca ggggtaagaa tcaatgccac cagaacagaa
     7021 agtgccattg ccgaaacgat ggtgatagag aactggcgat aaattgcccc agtagaaccg
     7081 ccgaagaatg ccatcggaat aaataccgct gacagcacca tcgcgatacc caccagtgcg
     7141 ccctgaattt gcgacatcga tttttccgtc gcttcttttg gcgggagctt atcctccatc
     7201 atcacgcgct cgacgttctc caccaccact atcgcatcat cgacgagcag cccgatggca
     7261 agcaccatcc cgaacatcgt tagtgtgttg atggagtaac caaaagcggc gaggatggca
     7321 aacgtcccta acaacaccac gggtaccgca atggtgggga tcagcgttgc tcgcatattc
     7381 tgcaagaaca gatacatcac caggaacacc agcataatgg cttcgaacag cgtttttacc
     7441 acttcgtgaa tagaaagctg gacgaatggc gtggtgtcat aagggtagag aaccttcatt
     7501 ccctgcggga agaatggctg taattccgcc agttttgcct taatggcttt cgcggtatcg
     7561 agagcattcg cgccggttgc cagcttaatc cccaggcccg ccgccggttt tccgttgata
     7621 cgagcgataa cgttatagtt ttcaccgcca agttcaaccc gtgcgacatc tttcaggcgt
     7681 accaccgagc cgtcactgtt tacgcgcagg gtcactttgc cgaattcttc cggatttttt
     7741 aaccgcgttt gagcaataat cgaggcattc aactgttgcc ctggtaacgc tggcgttccg
     7801 cccaactgtc cggcagcgat ctgatcgttc tgtaccttca actggttaat cacatcaacc
     7861 ggtgtcagtt tatatttgtt tagcagatcg gcgtccagcc agatacgcat cgcatactgt
     7921 gcgccgaaaa gctgtacgtc accgacgcca ttcagacggc taagcgtatc tttaacgtta
     7981 gaggccacat agtccgagat atcgtcctgt gtggtgcctg ggttatcaga gacaaaaccc
     8041 gccaccatca aatagctgct actggacttt tcaacactga tcccctgctg ctgaacctcc
     8101 tgcggcagca acggcgtggc gagctggagt ttgttctgca cctgcacttg cgcgatatca
     8161 ggatcggtcc cggactggaa ggtaagggta attgtcacgc taccggcgga atcgttggtg
     8221 gaggacatat acatcaggtt atcgatacca ttcatattct gttcgataac ctgcgtcacc
     8281 gtatcctgca cggtctgcgc atcagcacct ggatagtttg ccgaaacaga aaccgcaggc
     8341 ggtgcaatgg ttggatactg agcgacgggc aattgtagga tcgccagtgc gcccgccatc
     8401 atcagaataa tggccagcac ccatgcaaat atcggtcgtc gaataaaaaa gtttgccatg
     8461 tcagattacc ttacttcgat gcagtatctg cgggggtatc ggtagtggct ttaacctgct
     8521 ctcccggacg cgctttttgc aggccgctga caatgacttg atcgccagat ttcagacctt
     8581 cgctaatcaa ccatttatcg ccaatcgcct gactggcaac gacagggcgc gcttccacct
     8641 gacttttatc gttaacaatc agcacggttg catcaccacg cggtgtgcgg ctaacgcctt
     8701 gttgcgggat aagaatggcg tcaggttgga cgccttcatc aatccgtgca cgcacataca
     8761 tacccggcaa aagcgtatgt tgcgggttag ggaagacagc acgtagggtt atggagccgg
     8821 tgctttcatc aacggtcaca tcagagaatt gcagcgtacc tttcagggga taggtttgac
     8881 cgttttccat gaccaactct acgttgctgg tggcgttttc cttatgcaaa tttccttgct
     8941 ctacggattg cttcagcctc ataaaatcgt tgctggattg ggtcacatca acgtagatag
     9001 gatcgagctg ctggacagtc gccagttcag tcgtttgccc attagtgaca agagcgcctt
     9061 cggtcacggt cgatttgccg atacgtccgc taattggcgc agtcactttg gtataagcga
     9121 gattgatgcg agcgctttcg actgtgcctt ttgcggcaat cacggcggca tcggcctggc
     9181 gagcatcagc aatggcctgg tcgtactcct gctggctgat gtatttcgta cccacgagcg
     9241 gaacgtaacg ttttaccgtc aaatgcgcga tggcggcggc ggcttcactt ttcgccagtt
     9301 cgcctttcgc gctgttataa tttgcctgat aggtcgcggg atcgatctgg tacagggact
     9361 ggcctgcttg tacatcgctg ccttcagtga aattacgatt cagtacgatc ccgctaacct
     9421 gtgggcgaac ttcggctata cggtaagcat tggtgcggcc tggtaattca gtcttaactt
     9481 ctaacggggc cgttttcaca atatgaacgg taacctgcgg ttcaccgacg tgagctttct
     9541 cttctccctt atcgttacaa ccggcgatta aagccgcgga gatcagaata aaggagggca
     9601 ggaggaaaaa cctggcatgt ttcgtcatta ctattcctca aaaaaccaaa agcgcgttat
     9661 ttacccagaa aggcaacgcg ttaactcgca gaaagaaaaa tacagtttgc tatcctacaa
     9721 attatcattc gtcgatgtaa ggaatagtta tgaatactgg cgtctcaagg cacataaaca
     9781 caaaaaaaga ttaatattct actgttttat tttgacgcgg gttgaaagag gcagaattaa
     9841 aacctcgtaa attgaaatat atattcatgt ggcgaatgta ttttaggtaa ataatataca
     9901 ttgtttattt gacgatttat agcaactcaa tgttaccctc tcgtataaat acacattaga
     9961 tgatagatta accttcgcta ttttctcacc ctgtgtcgaa tatatttatt tcctgaataa
    10021 ttaatcatgg caaaaagaac caaagccgaa gctctgaaga cccggcaaga actgattgaa
    10081 actgccatcg cccagtttgc gcagcatggc gtaagcaaga cgacgctcaa cgacattgcc
    10141 gacgccgcta acgttacgcg tggcgctatc tactggcact tcgaaaacaa gactcaactg
    10201 tttaatgaga tgtggttgca acagccttca ttgcgggagt taatccagga acacttgacg
    10261 gctggattag agcatgaccc gtttcaacaa ttgcgtgaaa aattgattgt cggcttgcaa
    10321 tatattgcca aaattccccg ccagcaggcg ttgctgaaaa tcttatatca caaatgtgaa
    10381 tttaatgatg agatgctggc cgagggagtg atacgcgaaa agatgggctt taatccgcag
    10441 actctccgcg aagtattgca ggcgtgtcag caacaaggtt gtgtagcaaa taacctcgat
    10501 ttagatgttg tgatgattat tattaatggt gccttcagcg gaattgttca aaactggtta
    10561 atgaatatgg cgggttatga tctttataaa caagcacccg cgctggtcga taacgtatta
    10621 agaatgttca tgccagatga aaacataacg aaattaattc atcaaacgaa tgaattaagt
    10681 gtcatgtaaa ttcacattct gtcctgaaaa ttcagttcgt cacagttaac cagttttagt
    10741 ggattaactg agttcatatt acggcatttg tctgtttctg ttgtcagcag ttcaatccac
    10801 tgcatcagta aagtatcaaa cagaaaaacg aagacagcga aaacgacgag ccaccaatac
    10861 ttgcgaatca ttacctgagc ctgtgcatgt ttaaccaagt ctggcaggaa atatacacga
    10921 aatgaataat ctgaaaacca ggcttacact tcctttactt tgcaatgaga tcggggtcaa
    10981 cttcgcttaa ccggcttcgt tttgacaggt tgccggtctt tctttttttc actttcgcca
    11041 gttcttccgc agagtaatgc gacgcgacat ccagccgtcg aagccccatt ttgatgtact
    11101 cgctgttgat ctcaatacca atgaattttc gcccgctgga gacggctacg gcaccggtag
    11161 taaagctacc ggcaaacggg tcgagaatga tatcgcctgg gttggaagag gcgagaataa
    11221 tgcgtttcag taaggcttcc ggtttttgcg tcgggtggtt ctcatattca tccatcaaat
    11281 aacgcacgcg cggaaaatcc cagacgttac ccggtacttt ttgatgattg tatggctgtg
    11341 gaggattttt gcgataatcg atcaacgcgc gctgcgatcc ggttttggct tctaccagaa
    11401 tagcatcacc gttgaatgtg tagttctttg cgtctttcac catcatcagg atggggtcgt
    11461 acatggagcc gtagtgtttt ttcgcctgta ctccagaact gtcatatgac cagacgatgc
    11521 gacttttgat ggtaaaaagc ttgcggcact ggagatcgat aaagggcatg ttttccgtgc
    11581 tgttcatgat gtacatgctg ccctgctttt tcagaacgcg gtggcactct gcaatcactt
    11641 caaacagcca gtcgataaac agatcttctt tccaggcttc gatcagacca tcaaaatttt
    11701 taccgatgtt atatggtggg tcggcaaaga tcagatcgac actttcggcg gggatctttt
    11761 taagttcggc aagcgcatca ccgtgaataa tggtcttagc ttcattacca aaccgggtcg
    11821 gttcacatcc tgttctcatg gtcactccct ttgtgacacc tataaaaaag gcgcttcccc
    11881 atgccgagta gcgccttttt aatcaagcat ttagctaacc tgaattagtt catgccgtat
    11941 tttttcaatt ttttacgcag cgtaccacgg ttgatgccca tcatcagcgc agcacgggtc
    12001 tggttaccac gggtgtattg catcaccatg tccaacaggg gctgttctac ttcagccagt
    12061 accagctcat agaggtcatt cacatcctga ccattcagtt gagcaaaata gttcttcagt
    12121 gcctgtttaa ccgagtcacg caggggtttt tgggttacct gatcctgaga gttaacggta
    12181 gaaacggtca gtacgtcaga atttacgcgt tgttcgaaca tagttctgtc agctctttat
    12241 ttctgtttac gcaaaatttt cgaagtatgc ctccaacgcc tccagctgtt cgctggcatc
    12301 ctcaatggcg ttgaatgtgc gccgaaactg gtcatttgga gcgtgttcct ggagatacca
    12361 ggaaacgtgt ttacgtgcaa ttcggtaccc ttttgccgga ccataaaagt catgcagttc
    12421 ccgaacgtgc gcgcaaagca agcgcttaac ctctgccaaa ggcagtgggg gcagcaactc
    12481 cccagtgtcc agataatgct ggatttcccg aaagatccag ggtcttccct gagctgcgcg
    12541 gcctatcatc agggcatccg cccctgtata gtcgagcaca gctctggctt taagcgggtc
    12601 agtaatgtcg ccattcgcga taaccggaat ggaaactttc tgcttaactg cccgaatact
    12661 gtcgtactca gcttctccat tgaacaaaca ggcgcgtgta cggccatgaa tggtcagagc
    12721 ctgaatgcca cagtcttcag ccagttgggc aatctcttcg cagttacggt gttccggtgc
    12781 ccagccagtg cgaatcttca gggtaacagg aacgtccact gcattgacga cctcggtaag
    12841 gatcgattta acgacatccg ggtactgcaa gagggctgaa cctgcgagct tgcgattcac
    12901 ttttttagcc gggcaaccca tattgatatc aataatctgg gcaccgcttt ccacgttaat
    12961 acgtgctgca tctgccattt ctttcggatc gctaccagca atttgcacgg tgcgaatacc
    13021 gggttcatca atgtgcacca tccgtaaacg agatttgtcg ctttcccaaa cctgtgggtt
    13081 agaagacatc atctcggata ctgtcaatcc ggctcccatc tcgtagcaca acgtccgaaa
    13141 aggtctgtct gtaatgccag ccatgggcgc tgcgatcagg cgatttctga gctgatattg
    13201 tccgatgcgc atgagttaag aaatgaccat actgtgactg caaggcggcg tatattacgc
    13261 attttttgca cgagatgaaa ggccaaactt tgaccaatcc tctgagatgg atcaaagaat
    13321 tgcatttaaa atgagcgtgg tgcgataatt actcataaaa atcatcatat tagaaaatag
    13381 tgactaaaat ttacattcaa agaaatttga gtaagttctc aatttttctt tatgaatgaa
    13441 aattttggca cgcaaatttg cgtaaataac cggcaaattt acgtgccttt tgtgagcttg
    13501 ctcgcacttc gccccgcgtc accctacggc gatgcgaagg ttaattctta cgaccggtaa
    13561 tacggcacca ctcttctttt tccacgaccg ggtccagtgc gaagctatcg gcataagctt
    13621 cacaaacgct ctctgcctgg cttgccagaa taccggaaag gcccagcaaa ccgcctgaaa
    13681 ccggcaggac gctgattaac ggtgccagtt cacgtaatgg gcctgcaagg atgttcgcga
    13741 ccaccacgtc ggctttcatt tcttctggct gatctttcgg taagtagagt tccagacggt
    13801 cagaaacgcc attacgttcg gcgttgtcgc ggctagcctg aatcgcctgc ggatcgatat
    13861 caataccaat ggcttttgct gcacccagtt tcagcgccgc gatagccaga atgccggaac
    13921 cgcagccaaa gtcgatgact gttttaccag ttaaatcgag gctgtcgagc cattgtaggc
    13981 acagagaggt agttggatgg gtacccgtac caaacgccag ccctgggtct aacatcacgt
    14041 tgacggcgtt ttcgtccggc acatcacgcc agcttgggca gatccacagt cgttcaccaa
    14101 agcgcatcgg gtggaaatta tccatccatt cgcgctccca gtctttatct tccagttgtt
    14161 cgattttatg cgcgaagcct gcgccgagca gcggatggtt ttccagaatc gccaccacgt
    14221 cgttcatatc ggtttcagcg tcgaacagac caatcacatc ggtgtcgccc cacaggcgcg
    14281 tttcgcccgg cagcggctca aatactggcg tatcgtgggt atcctgaaaa gtgatagaaa
    14341 cggcacccgc ttccatcagc gcatcgctaa gatcttcagc gttcgcgccg gtggtgttca
    14401 gtttcagttg gatccaaggc atggcaaaac tctttattta tcagtagtca aaacggtagc
    14461 ttgcgggacg gatgtaccga aacggtttcc gaccaggaaa gccagcaaac ttagtagtaa
    14521 cgagggcacg atagggtgga agcccaggta ctgaatattc agcgtcgcga gtacggcata
    14581 cagcacgccg ccaacgatca tcgcacttag cgcgcctttg gcgttggcgc gttcccagta
    14641 aagacccagc accagcggcc acaggaaaac ggcttccaac ccaccgaagg ccagcaaatt
    14701 cagccatatg atcatttctg gcggcttcca ggcggcaagc agcagcaacg cgccgagaac
    14761 taacgtaatt accgccgaca tccgcttcag acgcgtctcg ttttgcattt gatccggacg
    14821 gatattcaga tagagatctt taatgatcgt agcggaactt tgtagcaatt gggcgttaat
    14881 tgtcgacatg atcgcagcca taggtgcagc cagaaagatc ccggcagcaa acggtggcag
    14941 cacttttacc attaacgtcg ggatcaccag atccggtacg gtgagatcgg ggatcactgc
    15001 acgacctaac gctccggcca ggtgcatacc gaacatcagg attgcgacta caatcgtacc
    15061 gatgatgatc ccccggtgta ccgctttgct gtctttataa gagatacagc gcaccgcagt
    15121 atgcggcagg ccaatcacgc caaagcacac cagtacccag aacgacgtca taaaggcagg
    15181 cgacagaata tcgtcagcgc cttgtggcgt aaccagttgc ggatcgatgg tttgcagcgt
    15241 ctctaccgca ttacttaaac cacctgcggc atgtaccacg ccaataagca gcacaacggt
    15301 gccaatcagc atcacaagcc cttgcatggt gtcgttcagc acgctggcgc gaaagccgcc
    15361 aaaggcggta tacaacgcaa tgctgatacc gaaaatcagc agcccggttt cataaggaat
    15421 acccgccgcg gtttccagca ggcgcgcacc gccgataaac tgcacggtca ttgccccaac
    15481 gaacgcaacc agcaaactca aactcgccag ccacaccaga agacgactct ggtagcgggc
    15541 aaacagcatg tcgttcagcg tcactgcatt gtagcggcgc gcaagaatcg cgaacttctt
    15601 gccgagaata ccgagcgaaa gccagactgc aggaagctga atcatcgcca gcaataccca
    15661 acccaggccg tatttataag cagctccagg cccgccgata aacgaacttg cactgatata
    15721 ggtcgcggtg agcgtcatcg ccagcacaat accgcccata gagcggctgc cgaggaaata
    15781 ctcattaagg aaggtaccgg tgctccgttt acgcatcgca taaacagaga taccgaacac
    15841 caccaccaga taggcgacca gcggtagaat cacttcaagc tgcatcgtca tcctccagtg
    15901 ggatatcgcg atagataaat ttcaccatcg cccagcacag tccaataaac agcagcggcg
    15961 tcaggatgca ggccatctca aaccagcgcg gaaagccggt aaaaccgggg gcaacgtcag
    16021 gtaagtaagc ggctgctaac caaactgcca gatacaaaag ggtcagcccc agcgcccagc
    16081 gcgcctcttt atgggcctga acaaaacgag tgtccacgga agggttcctc ctcatggggg
    16141 gatacgagaa acgggcaatt ctacggcaac tcttcaggca gggaaaataa tctgacagaa
    16201 aattgccgtt cagtgctgct gcaaaaagtc ttcaatgtca gccagtgagg atatcccttc
    16261 catcggacct tgccgcatta cggcgagcgc gccgctggca tttgcatatt gcagtgcctt
    16321 atgtgccggg aaaccggata agaaaagagt gataaacgtt gcgccaaagc agtcgcctgc
    16381 acccgttgga tcgataattt cgatatcgtg gcctgtaaca tgctgggcgt gtaatgtacc
    16441 gtttttaagc ttgtaatagc tggccccacg ctgggcgcgt tttatcgcca catgttttac
    16501 gccgccgtgg agaagatcgc taacaatctg ttcttctgac agatttttgt gacgcgcgaa
    16561 gaaagggagt tcgctttcgc tggggatgaa aatatccgta tattcaatca aataatcgag
    16621 agcctgcgcc atttcaggaa tgctcagcat ctctttgcga atattgggat cgaaagaaac
    16681 ggtgccgcca gccgatttga tcgtcgttat tgctttacgc atgacatcga tcatgcgaaa
    16741 tgagaacaat gatgagccca caatatggag atggttacac tgttttagca gatccttatc
    16801 aatgtgctca gcagtaaaca agccgcaggc gctgttaggg atattaaaga cgaaatcgcg
    16861 ctgctgggga ttttgataac tcacgaacgc cgtacctgtg acggcattgt tcataacatg
    16921 gatcccatcg gtaatgacac cttcatgacg gaggcgctct ataatgagtc ggccaaaatc
    16981 atcattacca acacatccga agaagatggc ccgatgggac agttttgcca cctgagcagc
    17041 aaaaattgct ggcgcaccgc tgggaaatgg cccgataaac tccccaggct gagtgaattt
    17101 ttgatgtggg ttgcgggaca aaaactcggc cagcaattcg cccatagcgc agatagttat
    17161 tgtcacaaaa cccctctcat tcctgaagcc tttcgcgatt ggaccaggta aagcactcat
    17221 tactggtata aaggataacg aaatcagccg actgcaattg ttgctgatat tgttcgttaa
    17281 tgctgcggct gacgatcaca ttttctgcct gatgcaaatg cccgatagca gccgttgatg
    17341 gcgcaggatc ggcggcaacg ataaccgtct tattctgggc atgatcgaaa cagagctgcc
    17401 aggcagcggc cagtctggga acgttgatat ttaaagtacc atcagcatcc agatggttga
    17461 tttccagaat gctatgtgta atggtgaaat gctgaagtgc ctgttcaagc ggttttccgg
    17521 ccagtgcggt gtcggggcgc agcatttcac tgccagccag tattatttcg ccatcaataa
    17581 actgatttgc cagcagcgca tgttcgggat cgttggtgat cagacgcagt tttttcactt
    17641 cgctgagcaa tggaatgatc ttacggcaga ttgtcccatg tccaagaaat agcgtgtcac
    17701 gatcgcgaat taaccgtgcg caatgtcgtg ctatttccat ttgttgtgcc agagacaatg
    17761 gcgcgatcgg ttgtatcgct tctggttcag aggagagtgg tgtcgcaata gcaccgccaa
    17821 atgatcgctt taaatatccc tgttgctcca gataactgag atcgccgcgg atcgtcacgc
    17881 cagagacacc aagttgcgca gataagtcat caactttgat ttcaccttgg gtggcaacaa
    17941 tttctgcaat ttttaatctg cgtttcagta ggttagacga ttttctcggc acgttaacac
    18001 tcttcattgg cctttaatgc gtaacactat agccccttgt atttttcttt gaaagttatc
    18061 cttcaataat atcgacaatt cgaaaagaaa atcatgggtc aaaaatcgca ataaaaatag
    18121 attaattcat tgaaaaataa atgaatttat tcatatttat gcagagatgt tattggtttc
    18181 acttgtaaag tgaaaaacaa attaagttat ttttttgtaa gttattttga tgatattcga
    18241 catgtatcac gctttttgcc gcttttgctg tgctagtttg ctttcaaaat gaaagtgaat
    18301 attctctttc ttcattttgt aaggcgaacg acaaataaca ggagctgcga tgtacatcat
    18361 ttcaagcaaa aacatgctga aaaaagccca gtcagaggga tatgccgtcc ccgctttcaa
    18421 cattcataac cttgaaactt tacaggtagt tgttgagagc gctgcacaac ttcgctctcc
    18481 cgttatgctg gcgggaacac ccggtactta tcgttatggt ggcgtgggaa gtttaatttc
    18541 gttagtacaa tcgctggctc gcgagtacaa cctgccgtta gtcctgcatc tcgaccatca
    18601 tgaagagagt gatgacattt ttaacaaggt tcgcgcaggg atccgttctg tcatgattga
    18661 tggctcccat ttgccatttg aagacaacat tgcgcgagtg caagaagtta ccaccttttg
    18721 ccatcgcttt gatgttagcg ttgaggccga gctagggcgt cttggcggcc aggaggacga
    18781 tctgctggtg gatgaaaaag attccgctta tacctcacca gccgcagctg cagagtttgt
    18841 tcaacgtacc caaattgact ccctggccgt agcaatcggc acagcacatg gtttatatgc
    18901 gcatgaacca cgactggatt ttgtgcggct ggaacagatt cgtcagcgag tggagattcc
    18961 actggtgttg catggtgctt cgggcttatc agaacaggac gttcagcact gtattcgccg
    19021 cggtatttgt aaagtgaatg tcgcgacaga attgaaaatt gcgtttgccg atgcgttaaa
    19081 aggatatttc tacaacaatc ctgcggcaaa tgatccacgc cactatatgc agcccgcaaa
    19141 ggccgccatg aaagaagtcg taactcgtat tattggtgtc tgtggtagtg aaggaaaaat
    19201 ttaagacgtt gtaccctaca aaaacaatga ggattgttta tgaaaaatat taaattactt
    19261 ggttcagcta tgttggtgag cctggcattg ttctcgcaaa attcgttggc aaaagagtat
    19321 aaaattggtg cgtcattatt aacacagcaa catcctttct atattgatct tgcgaatgcc
    19381 atgaaagaag aggcaaaaaa agacaatgtc aatttaagtg tct
//
LOCUS       DADMJE010000071        19310 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.072, whole genome shotgun sequence.
ACCESSION   DADMJE010000071 DADMJE010000000
VERSION     DADMJE010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19310)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19310)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19310
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.072"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..732
                     /gene="rihB"
                     /locus_tag="JN001_002235"
     CDS             <1..732
                     /gene="rihB"
                     /locus_tag="JN001_002235"
                     /EC_number="3.2.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosylpyrimidine nucleosidase"
                     /protein_id="HAY9053458.1"
                     /translation="IMRKQIVADNIHGETGLDGPVFESLTRQAESTHAVKYIIDTLMA
                     SDGDITLVPVGPLSNIAVAMRMQPAILPKIREIVLMGGAYGTGNFTPSAEFNIFADPE
                     AARVVFTSGVPLVMMGLDLTNQTVCTPDVIARMERAGGPAGELFSDIMNFTLKTQFEN
                     YGLAGGPVHDATCIGYLINPDGIKTQEMYVEVDVNSGPCYGRTVCDELGVLGKPANTK
                     VGITIDTDWFWGLVEECVRGYIKTH"
     gene            832..2082
                     /locus_tag="JN001_002236"
     CDS             832..2082
                     /locus_tag="JN001_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
                     /protein_id="HAY9053459.1"
                     /translation="MDVMRSVLGMVVLLTIAFLLSVNKKKISLRTVGAALVLQVVIGG
                     IMLWLPAGRWVAEKVAFGVHKVMAYSDAGSAFIFGSLVGPKMDTLFDGAGFIFGFRVL
                     PAIIFVTALVSILYYIGVMGILIRILGGIFQKALNISKIESFVAVTTIFLGQNEIPAI
                     VKPFIDHLNRNELFTAICSGMASIAGSTMIGYAALGVPVEYLLAASLMAIPGGILFAR
                     LLSPATESSQVSFNNLSFTETPPKSIIEAAATGAMTGLKIAAGVATVVMAFVAIIALI
                     NGIIGGVGGWFGFAHASLESILGYLLAPLAWVMGVDWSDANLAGSLIGQKLAINEFVA
                     YLNFSPYLQTGGTLDAKTVAIISFALCGFANFGSIGVVVGAFSAVAPHRVPEIAQLGL
                     RALAAATLSNLMSATIAGFFIGLA"
     gene            complement(2138..3226)
                     /locus_tag="JN001_002237"
     CDS             complement(2138..3226)
                     /locus_tag="JN001_002237"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9053460.1"
                     /translation="MNNREKEILAILRRNPLIQQNEIADMLQISRSRVAAHIMDLMRK
                     GRIKGKGYILTEQEYCVVVGTINMDIRGIADIRYPQAASHPGTIHCSAGGVGRNIAHN
                     LALLGRDVHLLSVIGDDFYGEMLLEETRRAGVNVSGCVRLHGQSTSTYLAIANRDDQT
                     VLAINDTHLLEQLTPQLLNGSRDLLRHAGVVLADCNLTAEALEWVFTLADEIPVFVDT
                     VSEFKAGKIKHWLAHIHTLKPTLPELEILWGQAITSDADRNAAVNALHQQGVQQLFVY
                     LPDESVYCSEKDGEQFLLTAPAHTTVDSFGAGDGFMAGLVYSFLEGYSFRDSARFAVA
                     CAAISRASGSLNNPTLSADNALSLVPMV"
     gene            complement(3229..4086)
                     /gene="nfo"
                     /locus_tag="JN001_002238"
     CDS             complement(3229..4086)
                     /gene="nfo"
                     /locus_tag="JN001_002238"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HAY9053461.1"
                     /translation="MKYIGAHVSAAGGLANAAIRAAEIDATAFALFTKNQRQWRAAPL
                     TTQTIDEFKAACEKYHYTSAQILPHDSYLINLGHPVTEALEKSRDAFIDEMQRCEQLG
                     LSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENTAGQGSNLGFKFEH
                     LAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPAECEKTFADFARIVGFKYLRGMHLN
                     DAKSTFGSRVDRHHSLGEGNIGHDAFRWIMQDDRFDGIPLILETINPDIWAEESAWLK
                     AQQTEKAVA"
     gene            complement(4160..5209)
                     /locus_tag="JN001_002239"
     CDS             complement(4160..5209)
                     /locus_tag="JN001_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family protein"
                     /protein_id="HAY9053462.1"
                     /translation="MTNITLQKQHRTLWHFIPGLALSAVITGVALWGGSIPAVAGAGF
                     SALTLAILLGMVLGNTIYPHIWKSCDGGVLFAKQYLLRLGIILYGFRLTFSQIADVGI
                     SGIIIDVLTLSSTFLLACFLGQKVFGLDKHTSWLIGAGSSICGAAAVLATEPVVKAEA
                     SKVTVAVATVVIFGTVAIFLYPAIYPLMSQWFSPETFGIYIGSTVHEVAQVVAAGHAI
                     SPDAENAAVISKMLRVMMLAPFLILLAARVKQLSGANSGEKSKITIPWFAILFIVVAI
                     FNSFHLLPQSVVNMLVTLDTFLLAMAMAALGLTTHVSALKKAGAKPLLMALVLFAWLI
                     VGGGAINYVIQSVIA"
     gene            5309..6190
                     /locus_tag="JN001_002240"
     CDS             5309..6190
                     /locus_tag="JN001_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9053463.1"
                     /translation="MHITLRQLEVFAEVLKSGSTTQASVMLALSQSAVSAALTDLEGQ
                     LGVQLFDRVGKRLVVNEHGRLLYPRALALLEQAVEIEQLFREDNGAIRIYASSTIGNY
                     ILPAVIARYRHDYPQLPIELSVGNSQDVMQAVLDFRVDIGFIEGPCHSTEIISEPWLE
                     DELVVFAAPTSPLARGPVTLEQLAAAPWILRERGSGTREIVDYLLLSHLPKFEMAMEL
                     GNSEAIKHAVRHGLGISCLSRRVIEDQLQAGTLSEVAVPLPRLMRTLWRIHHRQKHLS
                     NALRRFLDYCDPANIPR"
     gene            6395..7864
                     /gene="lysP"
                     /locus_tag="JN001_002241"
     CDS             6395..7864
                     /gene="lysP"
                     /locus_tag="JN001_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-specific permease"
                     /protein_id="HAY9053464.1"
                     /translation="MVSETKTTEAPGLRRELKARHLTMIAIGGSIGTGLFVASGATIS
                     QAGPGGALLSYMLIGLMVYFLMTSLGELAAYMPVSGSFATYGQNYVEEGFGFALGWNY
                     WYNWAVTIAVDLVAAQLVMSWWFPDTPGWIWSALFLGVIFLLNYISVRGFGEAEYWFS
                     LIKVTTVIVFIIVGVLMIIGIFKGAQPAGWSNWTIGEAPFAGGFAAMIGVAMIVGFSF
                     QGTELIGIAAGESEDPAKNIPRAVRQVFWRILLFYVFAILIISLIIPYTDPSLLRNDV
                     KDISVSPFTLVFQHAGLLSAAAVMNAVILTAVLSAGNSGMYASTRMLYTLACDGKAPR
                     IFAKLSRGGVPRNALYATTVIAGLCFLTSMFGNQTVYLWLLNTSGMTGFIAWLGIAIS
                     HYRFRRGYVLQGHDINDLPYRSGFFPLGPIFAFILCLIITLGQNYEAFLKDTIDWGGV
                     AATYIGIPLFLIIWFGYKLIKGTHFVRYSEMKFPQNDKK"
     gene            8157..10137
                     /gene="cirA"
                     /locus_tag="JN001_002242"
                     /pseudo
     CDS             8157..10137
                     /gene="cirA"
                     /locus_tag="JN001_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416660.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="catecholate siderophore receptor CirA"
     gene            complement(10169..11005)
                     /gene="yeiG"
                     /locus_tag="JN001_002243"
     CDS             complement(10169..11005)
                     /gene="yeiG"
                     /locus_tag="JN001_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-formylglutathione hydrolase"
                     /protein_id="HAY9053465.1"
                     /translation="MEMLEEHRCFEGWQQRWRHDSSTLNCPMTFSIFLPPPRDHTPPP
                     VLYWLSGLTCNDENFTTKAGAQRVAAELGIVLVMPDTSPRGEKVANDDGYDLGQGAGF
                     YLNATQPPWATHYRMYDYLRDELPALVQSQFNVSDRCAISGHSMGGHGALIMALKNPG
                     KYTSVSAFAPIVNPCSVPWGIKAFSSYLGEDKNAWLEWDSCALMYASNAQDAIPTLID
                     QGDNDQFLADQLQPAVLAEAARQKAWPMTLRIQPGYDHSYYFIASFIEDHLRFHAQYL
                     LK"
     gene            11263..11931
                     /gene="folE"
                     /locus_tag="JN001_002244"
     CDS             11263..11931
                     /gene="folE"
                     /locus_tag="JN001_002244"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HAY9053466.1"
                     /translation="MPSLSKEAALVHEALVARGLETPLRPPVHEMDNETRKSLIAGHM
                     TEIMQLLNLDLADDSLMETPHRIAKMYVDEIFSGLDYANFPKITLIENKMKVDEMVTV
                     RDITLTSTCEHHFVTIDGKATVAYIPKDSVIGLSKINRIVQFFAQRPQVQERLTQQIL
                     IALQTLLGTNNVAVSIDAVHYCVKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAV
                     RHHN"
     gene            11948..13105
                     /locus_tag="JN001_002245"
     CDS             11948..13105
                     /locus_tag="JN001_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF418 family protein"
                     /protein_id="HAY9053467.1"
                     /translation="MERNVTLDFVRGVAILGILLLNISAFGLPKAAYLNRAWYGAITP
                     QDAWTWAFLDLIGQVKFLTLFALLFGAGLQMLLPRGRRWIQSRLTLLVLLGFIHGLLF
                     WDGDILLAYGLVGLICWRLVRDAPSVKSLFNTGVMLYLVGLGVLLLLGLISDSQTSRA
                     WTPDASAILYEKYWKLHGGVEAISNRADGVGNSLLALGAQYGWQLAGMMLIGAALMRS
                     GWLKGQFSLRHYRRTGFVLVAIGVTINLPAIALQWQLDWAYRWCAFLLQMPRELSAPF
                     QAIGYASLFYGFWPQLSRFKLVLAIACVGRMALTNYLLQTLICTMLFYHLGLFMHFDR
                     LELLAFVIPVWLANILFSVIWLRYFRQGPVEWLWRQLTLRAAGTAISKTSR"
     gene            13247..14287
                     /gene="galS"
                     /locus_tag="JN001_002246"
     CDS             13247..14287
                     /gene="galS"
                     /locus_tag="JN001_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708050.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator GalS"
                     /protein_id="HAY9053468.1"
                     /translation="MITIRDVARQAGVSVATVSRVLNNSTLVSADTREAVMKAVSELD
                     YRPNANAQALATQVSDTIGVVVMDVSDAFFGALVKAVDLVAQQHQKYVLIGNSYHEAE
                     KERHAIEVLIRQRCNALIVHSKALSDDELAQFMDNIPGMVLINRVVPGYAHRCVCLDN
                     LSGARMATRMLLNNGHQRIGYLSSSHGIEDDAMRKAGWMSALKEQDIIPPESWIGTGT
                     PDMPGGEAAMVELLGRNLQLTAIFAYNDNMAAGALTALKDNGIAIPLHLSIIGFDDIP
                     IARYTDPQLTTVRYPIASMAKLATELALQGAAGNIDPRASHCFMPTLVRRHSVATRQN
                     AAAITNSTNQAM"
     gene            14567..15565
                     /gene="mglB"
                     /locus_tag="JN001_002247"
     CDS             14567..15565
                     /gene="mglB"
                     /locus_tag="JN001_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/glucose ABC transporter
                     substrate-binding protein MglB"
                     /protein_id="HAY9053469.1"
                     /translation="MNKKVLTLSAVMASMLFGAAAHAADTRIGVTIYKYDDNFMSVVR
                     KAIEQDAKAAPDVQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAGTVIEK
                     ARGQNVPVVFFNKEPSRKALDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNK
                     DGQIQSVLLKGEPGHPDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAW
                     LSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPVFGVDALPEALALVKSGALAGT
                     VLNDANNQAKATFDLAKNLADGKGAADGTNWKIDNKVVRVPYVGVDKDNLAEFSKK"
     gene            15626..17146
                     /gene="mglA"
                     /locus_tag="JN001_002248"
     CDS             15626..17146
                     /gene="mglA"
                     /locus_tag="JN001_002248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     ATP-binding protein MglA"
                     /protein_id="HAY9053470.1"
                     /translation="MVSSTTPSSGEYLLEMSGINKSFPGVKALDNVNLKVRPHSIHAL
                     MGENGAGKSTLLKCLFGIYQKDSGTILFQGKEIDFHSAKEALENGISMVHQELNLVLQ
                     RSVMDNMWLRRYPTKGMFVDQDKMYRETKAIFDELDIDIDPRARVGTLSVSQMQMIEI
                     AKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDE
                     VTVLRDGQWIATEPLAGLTMDKIIAMMVGRSLNQRFPDKENKPGEVILEVRNLTSLRQ
                     PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKQINNHNANE
                     AINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDKSRMKSDTQWVIDS
                     MRVKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIA
                     ELAKKGKGIIIISSEMPELLGITDRILVMSNGLVSGIVDTKTTTQNEILRLASLHL"
     gene            17162..18172
                     /gene="mglC"
                     /locus_tag="JN001_002249"
     CDS             17162..18172
                     /gene="mglC"
                     /locus_tag="JN001_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose/methyl galactoside ABC transporter
                     permease MglC"
                     /protein_id="HAY9053471.1"
                     /translation="MSALNKKSFLTYLKEGGIYVVLLVLLAIIIFQDPTFLSLLNLSN
                     ILTQSSVRIIIALGVAGLIVTQGTDLSAGRQVGLAAVVAATLLQSMDNANKVFPEMAT
                     MPIALVILIVCAIGAVIGLINGLIIAYLNVTPFITTLGTMIIVYGINSLYYDFVGASP
                     ISGFDSGFSTFAQGFVALGSFRLSYITFYALIAVAFVWVLWNKTRFGKNIFAIGGNPE
                     AAKVSGVNVGLNLLMIYALSGVFYAFGGMLEAGRIGSATNNLGFMYELDAIAACVVGG
                     VSFSGGVGTVIGVVTGVIIFTVINYGLTYIGVNPCWQYIIKGAIIIFAVALDSLKYAR
                     KK"
     gene            complement(18415..19310)
                     /gene="preA"
                     /locus_tag="JN001_002250"
                     /pseudo
     CDS             complement(18415..19310)
                     /gene="preA"
                     /locus_tag="JN001_002250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
BASE COUNT         4600 a         4774 c         5119 g         4817 t
ORIGIN      
        1 attatgcgta aacaaatcgt tgccgataat attcacggtg aaaccggact ggatggtccg
       61 gtattcgagt cgctgacccg ccaggcagaa agtacccacg cggtgaaata catcattgat
      121 accctgatgg caagcgatgg cgatatcact ctggtgccgg ttggtccgct ttcaaatatc
      181 gcggtggcaa tgcgtatgca acccgcgatc ctgcccaaaa tccgtgaaat tgtgctaatg
      241 ggcggcgctt acggtacagg caacttcacg ccatctgccg agttcaacat ctttgctgat
      301 ccggaagcag cccgcgtggt gttcacctcc ggcgttccat tagtgatgat gggcctcgat
      361 ctcaccaacc agactgtttg caccccggac gtgattgcac ggatggaaag ggcaggcggc
      421 cctgccggag agctgttcag cgacatcatg aacttcactc tcaaaacgca gttcgaaaac
      481 tacggcctgg ctggcggccc ggtgcacgac gccacctgca tcggttatct gattaaccct
      541 gatggcatta aaacccagga gatgtacgtc gaagtggacg tcaacagtgg cccttgctat
      601 gggcgtaccg tctgcgacga gctgggcgtt cttggcaagc ccgctaatac caaagtcggc
      661 atcactattg ataccgactg gttctggggc ttagtcgaag agtgcgtgcg cggctacatc
      721 aaaacccatt aagtgttgat aacaagccgg gtcagtatcg caagatccaa gcccggctat
      781 ttctgatggg cagaaagccg tcgcccaata tgacatgaag agataataac tatggatgtc
      841 atgagaagtg ttctgggaat ggtggtattg ctgacgattg cgtttttgct gtcagtaaac
      901 aagaagaaga tcagcctgcg taccgttggc gcggcgttag tgttacaggt cgtgattggc
      961 gggattatgc tttggttacc ggcagggcgt tgggtcgctg aaaaagtcgc ttttggcgtg
     1021 cataaagtga tggcgtacag cgacgcgggt agcgcattta tcttcggttc gctggtcggg
     1081 ccgaaaatgg acacgctgtt tgatggcgca ggatttatct ttggtttcag ggtattaccg
     1141 gcaattatct tcgtcactgc actggtgagt attctctact acatcggtgt gatggggatt
     1201 ttaattcgca ttctcggcgg tatattccag aaagcattaa atatcagcaa gattgagtca
     1261 ttcgtcgcgg tcaccaccat tttcctcggg caaaacgaaa ttccggcgat cgtcaaaccc
     1321 tttatcgatc atctgaatcg caatgaatta tttacagcga tttgtagtgg catggcctcg
     1381 attgctggtt cgacaatgat tggttacgcc gccctgggcg tacctgtgga atatttgctg
     1441 gcggcatcgt taatggcgat cccaggcggg atcttgtttg ctcgcctgtt aagcccggct
     1501 acggaatctt cgcaggtttc ctttaataac ctctctttca ccgaaacacc gccaaaaagc
     1561 attattgaag ccgctgcgac aggggcaatg accgggctga aaatcgccgc cggtgtagcg
     1621 acagttgtta tggcatttgt cgccatcatt gcgttaatta atggtattat cggcggcgtt
     1681 ggcggctggt ttggttttgc acatgcctcg ctggagtcca ttttaggtta cctgttggcc
     1741 ccattggcgt gggtgatggg ggttgactgg agtgatgcaa atcttgccgg gagtttgatt
     1801 gggcagaagc tggcgatcaa tgaatttgtc gcttatctca atttctcgcc atatctgcaa
     1861 acgggtggca ctctggatgc taaaaccgtg gcgattattt ctttcgcgtt gtgcggtttc
     1921 gctaactttg gttctatcgg ggtggtggtg ggggcgtttt ctgcggttgc gccacaccgt
     1981 gtgccggaaa tcgcccaact tggtttacgc gcgctggcgg cggcgacact ttctaacctg
     2041 atgagtgcta ctattgcagg attctttatt ggtttagcgt agtgcgcaat ttatgagccg
     2101 gataagatgc ggtcaagcgt cgaatccggc aacattgtta caccattggc actaatgaaa
     2161 gcgcgttatc ggcagacagg gtagggttgt ttaagctgcc gctggcgcgc gaaattgccg
     2221 cgcaggctac cgcaaaacgg gcgctgtcgc ggaaactgta tccttcaaga aagctatata
     2281 ccaggcccgc cataaaacca tcgccagcac caaaactgtc tactgtcgta tgcgctggcg
     2341 cggtcagcaa aaattgttct ccatcctttt cgctgcaata aactgactca tcgggcaaat
     2401 aaacaaacag ttgctgaaca ccttgctgat gcaatgcatt cactgcggca ttacggtcag
     2461 catcgctggt gatcgcctgt ccccataaaa tttccagctc cggtaaagtg ggtttcaggg
     2521 tgtgaatatg cgccagccag tgtttgattt tgcccgcttt gaattctgaa acggtatcga
     2581 caaacaccgg gatttcatca gcgagggtaa agacccattc cagcgcctcg gctgtcaggt
     2641 tgcaatcagc cagtaccacg cccgcatgac gaagtaaatc gcgcgacccg ttcagtagtt
     2701 gcggtgtcaa ctgttccagc agatgggtat cgttaatcgc cagcacggtt tgatcgtctc
     2761 gattggcaat tgccagatac gtcgatgtgc tttgaccatg caaacgaacg cagccggaga
     2821 cattcacgcc ggcacggcgc gtttcttcca ggagcatttc gccataaaag tcatcgccaa
     2881 tcactgaaag caaatggacg tcacggccta acagcgccag attgtgggcg atgttgcgtc
     2941 ccacgccgcc cgccgagcaa tgaattgtac cgggatgaga agccgcttgc gggtaacgga
     3001 tatccgcgat cccgcgaata tccatattga ttgtccccac cactacgcag tattcctgct
     3061 cggtgagaat gtaacctttg cctttaatcc gccctttgcg cattaaatcc ataatatgcg
     3121 ccgcaacgcg cgaacgactg atttgcagca tgtccgcaat ttcgttctgc tgaatcagcg
     3181 ggttacgccg taaaattgca aggatctcct tttcccggtt attcatcttc aggctaccgc
     3241 tttttcagtt tgttgcgctt tcagccaggc gctctcttct gcccagatat ccgggttgat
     3301 ggtttcaagg atcagcggaa tgccgtcgaa acggtcgtcc tgcatgatcc agcggaacgc
     3361 atcatgaccg atattgcctt caccgaggct atgatggcgg tcaacgcggc tgccaaaggt
     3421 gcttttcgca tcgttaaggt gcatcccgcg cagatactta aagccaacaa tacgggcaaa
     3481 atccgcgaac gttttctcgc attcggctgg agtacgcaaa tcatacccgg cagcgaaagc
     3541 atggcaggta tcaatgcaga cgccgacacg ggatttatct tccacgccgt cgataatcgc
     3601 cgcgagatgt tcgaatttaa accctaagtt actgccctga ccggcggtgt tttcaatcac
     3661 cgctgttaca ccttgagttt tatccagcgc aatgttgatg gattcggcaa tacgcgcaag
     3721 gcaatcctct tctgaaatct gcatcagatg gctgccaggg tggaagttga gcaaagaaag
     3781 ccccagttgt tcgcaacgct gcatttcatc tataaaggca tcgcgcgatt tttccagagc
     3841 ttcagtgacc ggatgtccga ggttaatcag atagctgtcg tggggaagaa tttgcgccga
     3901 tgtgtagtga tatttttcac aggctgcttt gaattcatcg atggtttgcg tcgtgagcgg
     3961 tgcggcacgc cactgacgtt ggtttttggt gaacaaggca aacgcggttg cgtcgatttc
     4021 ggcggcgcga attgcggcat ttgccagacc gccagcagca ctaacgtgcg ctccaatgta
     4081 tttcatgcga ggactcctgt taaacccgct ggaggaaaac ggtaatgata gcgggttaac
     4141 aggagcaaga tgtagtggtt tatgcgatga cgctttgaat cacatagtta atcgcaccac
     4201 caccaacaat cagccaggca aacagtacca gtgccatcag cagaggtttc gccccggctt
     4261 ttttcagcgc gctgacgtga gtggtcagac ccagcgccgc catcgccatt gccagcagga
     4321 aggtatccag cgttaccagc atgttcacca cgctctgcgg taacaggtgg aacgagttaa
     4381 agatggcaac gacgatgaac aagatggcaa accacggaat agtgattttg cttttctcgc
     4441 cgctgttcgc cccagacagc tgtttaacac gcgccgccag caggatgagg aacggagcca
     4501 gcatcatcac gcgcagcatt ttggaaataa ctgctgcgtt ttccgcatcc gggctgatgg
     4561 catgacctgc cgccaccacc tgcgccactt cgtgcacagt agaaccaatg tagataccga
     4621 aagtttccgg actaaaccat tgagacatca gcggatatat cgccgggtag aggaaaatcg
     4681 cgacggtccc gaagataaca acggttgcaa cagccacggt tactttactg gcttccgctt
     4741 tcactaccgg ctcagtcgcc agtaccgcgg cagcaccaca gatactgcta ccggcaccga
     4801 tcaaccagct ggtgtgctta tccagaccaa acactttctg ccccaggaag caagccagca
     4861 ggaaggtact ggacagcgtc aacacgtcaa tgatgatccc actgataccg acatcggcaa
     4921 tttgcgagaa cgtcagacgg aagccataaa gaatgatacc cagacgtaat aaatattgct
     4981 tggcaaacag cacaccaccg tcacagcttt tccagatgtg cggatagatg gtgttgccta
     5041 aaaccatccc caacaagatt gcgagggtga gggcactaaa cccggcaccc gcaaccgcgg
     5101 gaatggaacc accccacagg gcgaccccgg tgataactgc actcagggct aaccccggaa
     5161 taaaatgcca cagtgtacga tgttgtttct gtaaggtgat attcgtcata accctctcct
     5221 tataaccggg cataaggtta cgactaactg gtttaaaaat aaaattgatt atatatttat
     5281 aattaatctt tataagtggt aagcgactat gcacatcacc ctccggcagt tggaagtttt
     5341 tgcagaagta ttgaaaagtg gatcaaccac ccaggcgtcg gtgatgctgg cgttgtcgca
     5401 atcagcagtg agcgcagcct tgaccgacct ggaagggcag cttggcgtgc aactgtttga
     5461 tcgcgtgggg aaaagactgg ttgttaatga acacgggcgg ctgctctatc cgcgtgcgtt
     5521 ggcattgctt gaacaggcgg ttgaaatcga acaactgttt cgcgaagaca acggcgcgat
     5581 tcgtatctat gccagtagta ccatcggtaa ctacattctg cctgcagtta tcgcccgtta
     5641 tcgccatgat tatccgcagt tgccgattga acttagcgtt gggaacagcc aggacgtgat
     5701 gcaagcggtg ctggatttcc gcgttgatat tggctttatt gaaggaccgt gccacagcac
     5761 tgaaatcatt tctgaaccgt ggctggaaga cgagctggtg gttttcgccg cgccgacttc
     5821 gccgttggct cgtggtccgg tcaccttaga acagctggcc gctgcgccgt ggatcctgcg
     5881 tgaacgcggt tccggcacgc gggagattgt cgattatcta ttgctgtcac atttaccgaa
     5941 gtttgagatg gcgatggaat taggtaactc cgaggcaatc aaacatgcgg tgcgtcatgg
     6001 gttgggaatt agttgcctgt cgcgacgggt gattgaagat caattgcagg caggcacatt
     6061 aagtgaagtt gcggtccctc tgccgcgcct gatgcgtacg ttgtggcgta tacatcatcg
     6121 gcaaaaacac ctttccaacg cgctacggcg ctttctggac tattgcgatc ccgcgaatat
     6181 accgcgttaa gttgctgtac aagaacatgc tggtgctgtg tcgatttcgt gacgcagcgc
     6241 cctcagcatg cattcgccag aaaagagatt ggctgcttta cttataatcc cagggcgatc
     6301 atgaaggtgt cttataaccg tgtatttctg ccggaaggat tgccaatcgt ctgctacaat
     6361 cgcgcctcat ttttaagatg gatagcattt ttgtatggtt tccgaaacta aaaccacaga
     6421 agcgccgggc ttacgccgtg aattaaaggc gcgtcacctg acgatgattg ccattggcgg
     6481 ttccatcggt acaggtcttt ttgttgcctc tggcgcaacg atttctcagg caggtccggg
     6541 cggggcattg ctctcgtata tgctgattgg cctgatggtt tacttcctga tgaccagtct
     6601 cggtgaactg gctgcatata tgccggtttc cggttcgttt gccacttacg gtcagaacta
     6661 tgttgaagaa ggctttggct tcgcgctggg ctggaactac tggtacaact gggcggtgac
     6721 tatcgccgtt gacctggttg cagctcagct ggtcatgagc tggtggttcc cggatacacc
     6781 gggctggatc tggagtgcgt tgttcctcgg cgttatcttc ctgctgaact acatctcagt
     6841 tcgtggcttt ggtgaagcgg aatactggtt ctcactgatc aaagtcacga cagttattgt
     6901 ctttatcatc gttggcgtgc tgatgattat cggtatcttc aaaggcgcgc agcctgcggg
     6961 ctggagcaac tggacaatcg gcgaagcgcc gtttgctggt ggttttgcgg cgatgatcgg
     7021 cgtagctatg attgtcggct tctctttcca gggaaccgag ctgatcggta ttgctgcagg
     7081 cgagtccgaa gatccggcga aaaacattcc acgcgcggta cgtcaggtgt tctggcgaat
     7141 cctgttgttc tatgtgttcg cgatcctgat tatcagcctg attattccgt acaccgatcc
     7201 gagcctgctg cgtaacgatg ttaaagacat cagcgttagt ccgttcaccc tggtgttcca
     7261 gcacgcgggt ctgctctctg cggcggcggt gatgaacgca gttattctga cggcggtgct
     7321 gtcagccggt aactccggta tgtatgcgtc tactcgtatg ctgtacaccc tggcgtgtga
     7381 cggtaaagcg ccgcgcattt tcgctaaact gtcgcgtggt ggcgtgccgc gtaatgcgct
     7441 gtatgcgacg acggtgattg ccggtctgtg cttcctgacc tccatgtttg gcaaccagac
     7501 ggtatacctg tggctgctga acacctccgg gatgacgggt tttatcgcct ggctggggat
     7561 tgccattagc cactatcgct tccgtcgcgg ttacgtattg cagggacacg acattaacga
     7621 tctgccgtac cgttcaggtt tcttcccact ggggccgatc ttcgcattca ttctgtgtct
     7681 gattatcact ttgggccaga actacgaagc gttcctgaaa gataccattg actggggcgg
     7741 cgtagcggca acgtatattg gtatcccgct gttcctgatt atttggttcg gctacaagct
     7801 gattaaagga actcacttcg tacgctacag cgaaatgaag ttcccgcaga acgataagaa
     7861 ataagtttcc tcccttcctt gctaagccct ctcaaccgag agggcttttt caattccatt
     7921 tccctgacaa atcatgcgga tataaaattt aacatttgga ttgataattg ttatcgtttg
     7981 cattatcgtt acgccgcaat caaaaaaggc tgacaaatca gaggctgttc cggctttctg
     8041 ggatgatcac ctgcatacaa ataagtccac cgcgatgctg ccgtacgcaa ggggacgtga
     8101 agaaggtgtg agcgataacc cattttattt tcgtagttac ctcatggaga tatggaatgt
     8161 ttaggttgaa ccctttcgta cgggtcaggc tgtgtttgtc cgctatttct tgtgcatggc
     8221 ctgtgttagc ggtcgatgat gatggcgaaa cgatggttgt cactgcatct tccgttgaac
     8281 aaaacctcaa agatgcaccc gccagtatca gcgtcattac ccaggaagac ctgcagcgaa
     8341 aaccggtaca gaatctgaag gatgtcctca aagaagtgcc tggcgtacaa ctgacgaacg
     8401 aaggggataa ccgtaagggc gttagtattc gtggtctgga cagcagctac accctgattc
     8461 tcgtcgacgg taaacgcgtt aactcccgca atgccgtctt ccgccacaat gatttcgatc
     8521 tgaactggat cccggtcgat tccatcgaac gtattgaagt ggttcgtggc ccgatgtcgt
     8581 cgctatacgg ctccgatgcg ctcggcggtg tagtgaatat catcaccaaa aaaatcggtc
     8641 agaaatggtc gggtaccgtt accgtcgata ccaccattca ggaacatcgc gatcgcggtg
     8701 atacctataa cggtcagttc tttaccagtg gaccattaat tgatggtgtg ctgggaatga
     8761 aagcttacgg cagcctggca aaacgtgaaa aggatgaccc gcaaaactca acgaccaccg
     8821 ataccggaga aatgccgcgt attgaaggat tctccagccg cgacggcaat gtcgaatttg
     8881 cctggacacc gaatcaaaat cacgatttta ctgccggata cggtttcgac cgtcaggaac
     8941 tcgctggaca aaaaccgcct ggaacgccag aactactccg tcagccataa tgggcgttgg
     9001 gattacggca ccagcgaact gaaatactac ggtgagaaag tcgagaacaa aaaccctggc
     9061 aacagcagcc cgataacttc cgaaagcaat acggtcgacg gcaaatacac gttgccgctg
     9121 acggcgatta atcagtttct cacggttggc ggtgaatggc gtcacgacaa acttagcgat
     9181 gcggtgaacc tgaccggggg aaccagctcc aaaacgtctg ccagccagta cgcgctgttt
     9241 gtggaagatg aatggcggat cttcgagccg ctggcgctga cgaccggcgt gcgtatggac
     9301 gatcacgaaa cctacggtga acactggagt ccgcgtgcct acctggttta taacgccacc
     9361 gacaccgtaa cggtgaaagg gggctgggcg acggcattta aagcaccttc tctgttgcaa
     9421 cttagccctg actggacgag caattcctgc cgtggcgcat gtaagattgt gggtagcccg
     9481 gatctgaaac cagaaaccag cgaaagttgg gagctggggc tttactacat gggtgaagaa
     9541 ggctggctgg aagggggtga atccagcgtt accgttttcc gtaacgatgt gaaagatcgt
     9601 atcagcatca gccgtacgtc tgacgtcaac gctgcaccgg gctaccaaaa ctttgttggt
     9661 tttgagacgg gcgctaacgg acggcgcata ccggtattta gctactacaa cgttaacaaa
     9721 gctcgtattc agggcgtgga aaccgaactg aaaattccgt tcaacgatga atggaaactg
     9781 tcgatcaact acacctacaa cgatggtcgt gatgtcagca acggcgaaaa caaaccgcta
     9841 tccgatctgc cgttccatac tgctaacggt acgctggact ggaaaccgct ggcgctggaa
     9901 gactggtcat tctatgtttc tggtcactat accgggcaga aacgcgccga cagcgcgacg
     9961 gctaaaacac cgggcggtta taccatctgg aataccggcg cggcctggca ggtgactaaa
    10021 gacgtcaaac tgcgcgcagg cgtgctgaac cttggcgaca aggatctcag tcgtgacgac
    10081 tacagctata acgaagacgg acgtcgttac tttatggcag tggattatcg cttctgatga
    10141 gaagatgccc ggcgaaccgg gcggactttc acttcagtaa atactgcgca tggaagcgca
    10201 ggtgatcctc tataaaagag gcgatgaagt agtaactgtg atcatatccc ggctgaatac
    10261 gcagcgtcat cggccacgct ttctggcgcg cggcttctgc cagtaccgca ggttgcaact
    10321 ggtcggcaag aaactgatca ttatcgccct gatcgataag cgtcgggatc gcatcctgcg
    10381 cgttactggc atacatcagc gcgcaactgt cccattccag ccatgcattt ttgtcctcac
    10441 ctaaatagct gctaaacgct ttgattcccc acgggacgct gcacggattc acaattggcg
    10501 caaaggccga aacgctggtg tatttacccg gatttttcag cgccataatc agcgcaccgt
    10561 gaccacccat tgagtgaccg ctaatggcgc agcggtcgct gacattaaat tgcgactgaa
    10621 ccagcgccgg taattcatcg cgcagataat catacatccg gtaatgcgtc gcccacggcg
    10681 gttgcgtggc attaagataa aagcctgcgc cctggcctaa atcgtagcca tcgtcgttgg
    10741 caaccttttc gccgcgcggg ctggtgtctg gcatcaccag tacaatcccc agttctgccg
    10801 ccacgcgctg ggcacccgcc ttggtggtga agttctcgtc attgcaggtt aatccggaaa
    10861 gccagtacag cactggtggc ggggtgtgat cacgaggggg tgggagaaag atactgaacg
    10921 tcatcgggca gtttaaggta ctggagtcgt gtcgccagcg ttgctgccag ccttcaaaac
    10981 agcggtgctc ttcgagcatt tccatgcgtg gctccttgtt gtgttgtttg caatttcttc
    11041 atcataccgt ttattcaatg tgctgtgagt aactttcact tccgtatttg cataacgatg
    11101 ttttaacatc tgctgatgaa aggcagcggc aattacaata attatcgctg tgaatactgg
    11161 attatgtgcg ccgcctcacg cacaataatc aggctgtaaa tcagcttaat aactttgccc
    11221 ccacgcaggg cggaggcgtc acacctgcag gagaaatcat aaatgccatc actcagtaaa
    11281 gaagcggccc tggttcatga agcgttagtt gcgcgaggac tggaaacacc gctgcgcccg
    11341 cccgtgcatg aaatggataa cgaaacgcgc aaaagcctta ttgctggtca tatgaccgaa
    11401 atcatgcagc tgctgaatct cgacctggct gatgacagtt tgatggaaac gccgcatcgc
    11461 atcgctaaaa tgtatgtcga tgaaattttc tccggtctgg attacgccaa cttcccgaaa
    11521 atcaccctca ttgaaaacaa aatgaaggtc gatgaaatgg tcaccgtgcg cgatatcact
    11581 ctgaccagta cctgtgaaca ccattttgtt accatcgatg gcaaagcgac ggtggcttat
    11641 atcccgaaag attcggtgat cggtctgtca aaaattaacc gtatcgtgca gttctttgcc
    11701 cagcgtccgc aggtgcagga acgtctgacg cagcaaattc ttattgcgct acaaacgctg
    11761 ctgggcacca ataacgtggc tgtctccatt gatgcggtgc attactgcgt gaaagcgcgt
    11821 ggcatccgcg atgcaaccag tgccacaaca acgacctctc ttggtggatt gttcaaatcc
    11881 agtcagaata cgcgccacga gtttctgcgc gctgtgcgtc atcacaactg attaaaaggc
    11941 aggaaccatg gagcgcaacg taacgctcga ttttgttcgc ggcgtcgcca ttctggggat
    12001 cctgctatta aacatcagcg cctttgggct accaaaggcg gcttatctca atcgcgcctg
    12061 gtacggcgct attacgccgc aggatgcatg gacctgggca tttctcgatc tcatcggcca
    12121 ggtgaaattc ctcacgcttt ttgcgctgct gtttggtgcg ggcctgcaaa tgttgctgcc
    12181 ccgtggcaga cgctggatcc agtcgcggtt aacgctgtta gtcttgctgg gttttattca
    12241 cggtttattg ttctgggacg gcgatattct gctggcttac gggctggtgg gcttaatctg
    12301 ctggcggctg gtgcgcgatg cgccatcggt aaaaagcctg tttaatacag gcgtcatgct
    12361 ttatctggtg gggcttggcg ttttgctgtt attggggctg atttccgaca gccagaccag
    12421 ccgcgcctgg acgccggatg catcggctat tttgtatgaa aaatactgga agcttcacgg
    12481 cggcgttgaa gcgatcagta atcgtgccga tggtgttggc aacagtttac tggcactggg
    12541 cgcacagtat ggctggcaac tggcagggat gatgctcatt ggtgcggcgc tgatgcgcag
    12601 cggctggctg aaagggcagt tcagcttacg tcactatcgt cgtactggtt ttgtgctggt
    12661 ggcgattggg gtgaccatta accttcctgc catcgccctg caatggcagc tggactgggc
    12721 gtatcgctgg tgtgccttct tacttcaaat gccgcgggaa ctgagtgcgc cgtttcaggc
    12781 gattggctat gcgtcgctgt tttatggctt ctggccgcaa ttgagccgct ttaagctggt
    12841 gcttgcgatc gcctgcgtcg gacggatggc gctgaccaac tatctattgc aaacgctgat
    12901 ttgtaccatg cttttttacc acctcggttt gtttatgcat tttgaccgcc tggagctgct
    12961 ggcgtttgtt attccggtat ggctggcgaa tatcctcttc tctgttatct ggctgcgtta
    13021 cttccgccag gggccggtgg aatggctctg gcgtcagtta actttgcgtg ctgccggaac
    13081 ggcaatatct aaaacatcaa gataacgatc tggatcacat tcgttaacaa aacggctgta
    13141 accgtttcca ttgctgtgac tcgattcacg aagtcctgta ttcagtgctg acaaaatagc
    13201 cgccagcaag cagtcattta ctgcaatctc ataacaggta gtgaatatga tcaccattcg
    13261 tgatgtagcg cgtcaggctg gcgtctctgt ggcaacggtt tcccgggtgc tcaataacag
    13321 cacgctggtc agtgccgaca cgcgtgaagc agtaatgaaa gccgtgagtg agctggatta
    13381 tcggccaaac gccaatgccc aggcgctggc aactcaggtt agcgacacca ttggcgtggt
    13441 ggtgatggac gtttctgatg cgtttttcgg cgcgctggta aaagcggtgg atctagtcgc
    13501 tcagcagcat cagaaatacg tgctaatcgg caatagctat catgaagcgg aaaaagagcg
    13561 tcacgccatt gaggtgttaa ttcgccagcg ttgtaatgcg ttgattgttc actcaaaagc
    13621 attgagtgac gatgaactgg cgcaatttat ggataacatt cccggtatgg tgttaatcaa
    13681 ccgcgttgtg ccggggtacg cccatcgttg cgtttgcctg gataatctca gcggtgcccg
    13741 aatggcgacg cgcatgttgc tgaataacgg tcatcaacgt attggttatc tttcttccag
    13801 tcacggcatt gaagatgacg ccatgcgtaa agcaggctgg atgagtgcgt tgaaagagca
    13861 ggatattatt ccgccggaaa gctggattgg cactggtacg ccggacatgc cgggcggtga
    13921 ggcggcgatg gttgaactgc tggggcgcaa tctacaactt accgctatat ttgcttataa
    13981 cgacaatatg gccgctggcg cactgacagc attaaaagat aatggcattg cgattccgtt
    14041 acatctctca atcatcggtt tcgatgatat tcccatcgcc cgttacaccg acccgcaatt
    14101 aacgaccgtg cgttatccca ttgcttcaat ggctaaatta gccaccgaac tggccttgca
    14161 gggggcagca ggcaatattg atcctcgtgc cagccactgt tttatgccga cgttagtgcg
    14221 tcgccattct gtcgcaacgc gccagaatgc ggcggcgatc actaactcaa caaatcaggc
    14281 gatgtaaccg ctttcaatct gtgagtgatt tcacagtatc ttaacaatgt gatagctatg
    14341 attgcaccgt tttaacgttg taacccgtat gtaacagtga ataatcactt tcaccgaggt
    14401 aatagcgtca taacaacaat taaagccgtt ttctggagcg ttaccgggca tggaagaacg
    14461 aattttaaaa agtgagcttc ggcgttcagt aacacttcat taactctact gccctgccga
    14521 gcatttatct caagcactac cctgcataag aaaaaccgga gataccatga ataagaaggt
    14581 gttaaccctg tctgctgtga tggccagcat gttattcggt gccgctgcac acgctgctga
    14641 tactcgcatt ggtgtaacaa tctataagta cgacgataac tttatgtctg tagtgcgcaa
    14701 ggctattgag caagatgcga aagccgcgcc agatgttcag ctgctgatga atgattctca
    14761 gaatgaccag tccaagcaga acgatcagat cgacgtattg ctggcgaaag gggtgaaggc
    14821 actggcaatc aacctggttg acccggcagc tgcgggtacg gtgattgaga aagcgcgtgg
    14881 gcaaaacgtg ccggtggttt tcttcaacaa agaaccgtct cgtaaggcgc tggatagcta
    14941 cgacaaagcc tactacgttg gcactgactc caaagagtcc ggcattattc agggcgattt
    15001 gattgctaaa cactgggcgg cgaatcaggg ttgggatctg aacaaagacg gtcagattca
    15061 gtccgtactg ctgaaaggtg aaccgggcca tccggatgca gaagcacgta ccacttacgt
    15121 gattaaagaa ttgaacgata aaggcatcaa aactgaacag ttacagttag ataccgcaat
    15181 gtgggacacc gctcaggcga aagataagat ggacgcctgg ctgtctggcc cgaacgccaa
    15241 caaaatcgaa gtggttatcg ccaacaacga tgcgatggca atgggcgcgg tagaagcact
    15301 gaaagcacac aacaagtcca gcattccggt gtttggcgtc gatgcgctgc cagaagcgct
    15361 ggcgctggtg aaatccggtg cactggcggg cacagtactg aacgatgcta acaaccaggc
    15421 gaaagcgacc tttgatctgg cgaaaaacct ggccgatggc aaaggtgcgg ctgatggcac
    15481 caactggaaa atcgacaaca aagtggtccg cgtaccttat gttggcgtag ataaagacaa
    15541 cctggctgaa ttcagcaaga aataagactg attgggcgca gtcgtttact gcgcccttat
    15601 tgtatggcca acaaggtaaa attatatggt cagctcaacg actccgtctt ccggggaata
    15661 cttgttggaa atgagcggta tcaacaagtc ctttcctggt gttaaggcac ttgataacgt
    15721 taatttaaaa gtccggccac attctatcca tgcattaatg ggggaaaacg gtgcaggaaa
    15781 atcgacatta ttaaaatgcc tgtttggtat ttatcaaaaa gactccggca ccattttatt
    15841 ccagggtaaa gagatcgatt tccattccgc caaagaggca ctggaaaatg gtatttcgat
    15901 ggtacaccag gagttaaacc tggtattaca acgttcggtg atggataaca tgtggctgag
    15961 gcgatatccc accaaaggca tgtttgtcga tcaggacaaa atgtaccgcg aaaccaaagc
    16021 gatttttgat gaactggata ttgatatcga tccgcgtgcg cgcgtcggca cattatccgt
    16081 ttcgcaaatg cagatgatcg aaatcgccaa agcgttttcc tataacgcga aaattgtgat
    16141 tatggatgaa ccgacttctt cgttaaccga aaaagaggtc aatcatctgt tcactattat
    16201 tcgtaaatta aaagagcgcg gctgcggtat tgtttatatc tcgcataaaa tggaagaaat
    16261 cttccagtta tgtgatgaag ttaccgtatt gcgcgacggt cagtggatcg ccaccgaacc
    16321 gctggcagga ctgacgatgg acaagatcat cgccatgatg gttgggcgtt ctcttaatca
    16381 gcgttttcct gacaaagaaa acaagccggg cgaagtcatc ctcgaggtgc gtaacctaac
    16441 gtcactgcgc cagccgtcga ttcgcgatgt ctcgtttgat ctgcataaag gggagatcct
    16501 cggtattgcc gggctggtgg gggcgaaacg taccgatatt gttgagacgt tatttggtat
    16561 tcgcgagaaa tcggctggca ccattacgtt gcacggcaaa cagatcaata accataatgc
    16621 caacgaagcc ataaaccacg gatttgcact ggtaactgag gagcgccgct caacgggaat
    16681 ttatgcctat ctggatattg gttttaactc gttaatttcc aatattcgca actacaaaaa
    16741 taaagttggt ttactggata aatcgcggat gaaaagcgat acccagtggg tgattgattc
    16801 gatgcgggta aaaacaccgg ggcatcggac gcaaattggt tcgctctcag gtggtaatca
    16861 gcaaaaggtg attattgggc gctggctact aacgcaacca gaaatattaa tgctcgatga
    16921 accgacgcgc ggtattgatg tcggggcgaa gtttgagatc tatcagttaa ttgccgaact
    16981 ggcgaagaaa ggcaaaggga ttattattat ctcctctgaa atgcctgagt tgttagggat
    17041 aacagaccgt attctggtca tgagcaatgg tctcgtttcc ggaattgtcg acacaaaaac
    17101 aacaacgcaa aacgaaattc tgcgtcttgc gtctttgcac ctttaagatt aggggcttcc
    17161 catgagtgcg ttaaataaga aaagttttct tacttacctg aaagagggcg gtatttacgt
    17221 cgttctttta gttttgctgg cgattattat tttccaggac ccaacatttt taagtctgtt
    17281 gaacttaagt aatattctca cccagtcatc ggtgcgtatt attatcgcgc tcggtgtggc
    17341 agggttaatt gtcacccagg ggaccgacct ttctgcgggg cgtcaagtag ggctggcagc
    17401 agtggtggca gcgacattat tgcagtccat ggataacgcc aataaagtgt tcccggaaat
    17461 ggcgacgatg ccgattgcgc tggttattct gattgtctgt gccattggtg cggtgatcgg
    17521 tttgatcaac ggtctgatta tcgcttatct caacgttacg ccgttcatta ccacgctcgg
    17581 cacgatgatc atcgtctatg gcatcaactc gctctattac gactttgtcg gggcgtcgcc
    17641 aatttctggt tttgacagtg gcttctctac ctttgctcag ggctttgtcg cgctggggag
    17701 tttccgtctc tcttacatca ccttctacgc gttgattgcg gtggcgttcg tctgggtgtt
    17761 gtggaacaaa acccgcttcg gtaagaacat ttttgccatt ggcggtaacc cggaagcggc
    17821 aaaagtatct ggtgtcaacg tcggcctgaa cctgctgatg atctacgcgt tgtctggcgt
    17881 gttctatgcc tttggcggga tgttagaagc cggacgtatc ggctctgcca ccaacaacct
    17941 cggctttatg tatgagctgg atgctatcgc ggcgtgcgtg gtaggcggtg tatcgttcag
    18001 cggcggtgtg gggacggtga ttggcgtggt gaccggggta attattttta ccgtcatcaa
    18061 ctatggcctg acgtatatcg gcgtaaaccc atgctggcag tacatcatca aaggggcgat
    18121 tattatcttc gccgtagcgc tggattcact gaaatacgcg cgtaagaaat gatgtgaatg
    18181 tggtccgcat tcggtcataa acgcacataa catcatgatc tgtgtggttt tgtaggccgg
    18241 ataaggcgtt cacgccgcat ccggcaacag gagccaaatg ccggatgcaa cgctggcgcg
    18301 ttttatccgg cctacaataa gctcaacata ctgatttgta tggttttgta ggccggataa
    18361 ggcgttcaag ccgcatccgg cgacaggaac caaatgccgg atgtgacgcg ggttctacaa
    18421 cgttaccggg tgttctttct cgcctttctt aaacttcact tccccgagct caatacaacc
    18481 caccgggcag acgtgaccac aaagcagaca acccacacat ttctcggtat tacaatgcgg
    18541 tgtgcgggtt ttctcgctcc attccatcgc ctggtgaccg ccgtcgtaac aggaaatata
    18601 acagcgtcca cagccaacac atttgtcaag attgatacgg ggatagacaa tataactgcg
    18661 gtctaaatct tccgccggga caatattgtt attcgccaga cctaccatct cctgcaacga
    18721 atcaaatccc tgatcggcga gataatgcga taacccgctc gccatatctt ctacgatgcg
    18781 attgccgtac tgcataatgc cggtggtgac ctgtaacgtt gctgcgccga gcaataaaaa
    18841 ctccgccgca tcctcccagg tttcaatgcc gccgataccg ctgattggga aatcgcgcag
    18901 ttctggatgg gtgcgcattt gctgaatgaa gcgcagggcg atcggtttta ccgctttacc
    18961 ggaatatccg gaaatactcg atttaccgtt aacgatcggc ataccgattt tctgattaag
    19021 atcgatattg gtgatggatt taacggtgtt aattgccgca atgccatctg cgccgccgcg
    19081 cttcgccgcc agcgccactt cgcacatatc accgatattc ggcgtcatct tcgccagcat
    19141 tggcagcgtg gaaccgcgtt tcaccgcccg acaatatttt tctaccagca ccggactttg
    19201 cccgacatcg ctacccatcg catgagaagt catttgcgga caggagaagt tacactcgat
    19261 catatccgca ccagctcctc ccattgctgc tcattttccc ccatgatcga
//
LOCUS       DADMJE010000072        19152 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.073, whole genome shotgun sequence.
ACCESSION   DADMJE010000072 DADMJE010000000
VERSION     DADMJE010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19152)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19152)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19152
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.073"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..910)
                     /locus_tag="JN001_002251"
     CDS             complement(<1..910)
                     /locus_tag="JN001_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY9053472.1"
                     /translation="MTNFTTSTPHDALFKSFLTHPDTARDFMEIHLPKDLRELCDLDS
                     LKLESASFVDEKLRALHSDILWSVKTREGDGYIYVVIEHQSREDIHMAFRLMRYSMAV
                     MQRHIEHDKRRPLPLVIPMLFYHGSRSPYPWSLCWLDEFAAPTTARKLYSAAFPLVDV
                     TVVPDDEIVQHRRVALLELIQKHIRQRDLMGLIDQLVVLLVTECANDSQITALLNYIL
                     LTGDEARFKAFISELTRRMPHHRERIMTIAERIHNDGWLLGRERGRKEGKVEGERSLL
                     RLLLQNGADPEWIQRYTGLSAEQMQAL"
     gene            1377..2609
                     /gene="mdtM"
                     /locus_tag="JN001_002252"
     CDS             1377..2609
                     /gene="mdtM"
                     /locus_tag="JN001_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtM"
                     /protein_id="HAY9053473.1"
                     /translation="MPRFFARHAATLFFPMALILYDFAAYLSTDLIQPGIINVVRDFN
                     ADVSLAPAAVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATMFTTSMT
                     QFLIARAIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLIAPIIGPLSGAAL
                     MHFVHWKVLFAIIAVMGFISFVGLLLAMPETVKRGAVPFSAKSVFRDFRNVFCNRLFL
                     FGAATISLSYIPMMSWVAVSPVILIDAGSLTTSQFAWTQVPVFGAVIVANAIVARFVK
                     DPTEPRFIWRAVPIQLVGLALLIIGNLLSPHVWLWSVLGTSLYAFGIGLIFPTLFRFT
                     LFSNNLPKGTVSASLNMVILMVMSVSVEIGRWLWFNGGRLPFHLLAVVAGVIVVFTLA
                     GLLNRVRQHQAAELAEER"
     gene            2650..3930
                     /locus_tag="JN001_002253"
     CDS             2650..3930
                     /locus_tag="JN001_002253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HAY9053474.1"
                     /translation="MNKLIELRRAKMLALSLLLIAAATFVVTLFLPPNFWVSGVKAIA
                     EAAMVGALADWFAVVALFRRVPIPIISRHTAIIPRNKDRIGENLGQFVQEKFLDTQSL
                     VALIRRHEPALLIGNWFSQPENARRVGQHLLQIMSGFLELTDDARIQRLLKRAVHRAI
                     DKVDLSGTSALMLESMTKNDRHQVLLDTLIAQLIALLQRDKSRKFIAQQIVRWLESEH
                     PLKAKILPTEWLGEHSAELVSDAVNSLLDDISRDRAHQIRHAFDRATFALIDKLKNDP
                     EMAARADAVKSYLKEDEAFNRYLSELWGDLREWLKADINSEDSRVKERIARAGQWFGE
                     TLIADDALRASLNGHLEQAAHRVAPEFSAFLTRHISDTVKSWDARDMSRQIELNIGKD
                     LQFIRVNGTLVGGCIGLILYLLSQLPALFPLSNF"
     gene            4046..5198
                     /locus_tag="JN001_002254"
                     /pseudo
     CDS             4046..5198
                     /locus_tag="JN001_002254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418755.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase subunit D"
     gene            5208..5965
                     /locus_tag="JN001_002255"
                     /pseudo
     CDS             5208..5965
                     /locus_tag="JN001_002255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313324.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            5962..6219
                     /locus_tag="JN001_002256"
     CDS             5962..6219
                     /locus_tag="JN001_002256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3343 domain-containing protein"
                     /protein_id="HAY9053475.1"
                     /translation="MKEFLFLFHSTVGVIQTRKALQAAGMTFRVSDIPRDLRGGCGLC
                     IWLTCPPGEEIQWVIPGLTESIYCQQDGVWRCIAHYRVSPR"
     gene            6173..7144
                     /locus_tag="JN001_002257"
     CDS             6173..7144
                     /locus_tag="JN001_002257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000225344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjiK family protein"
                     /protein_id="HAY9053476.1"
                     /translation="MVSGAALHITGFLRVKDSLRSLRILLDILLICLKGITVTKSISL
                     SKRISVIVILFAIVAVCTFFVQSCARKSNHAASFQNYHATIDGKEIAGITNNISSLTW
                     SAQSNTLFSTINKPAAIVEMTTNGDFIRTIPLDFVKDLETIEYIGDNQFVISDERDYA
                     IYVISLTPNSEVKILKKIKIPLQDSPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN
                     GLLSSNELHISKDEALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIG
                     EISLTKGSRGLSHNIKQAEGIAMDASGNIYIVSEPNRFYRFTPKSSH"
     gene            7212..8384
                     /locus_tag="JN001_002258"
     CDS             7212..8384
                     /locus_tag="JN001_002258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053477.1"
                     /translation="MPSSSHPVERFSFSTALFGMLVLTLGMGLGRFLYTPMLPVIMAE
                     GAFSFSQLSWIASGNYAGYLAGSLLFSFGAFHQPSRLRPFLLVSALARGLLILAMAWL
                     PPFILVLLIRFLAGVASAGMLIFGSTLIMQHTRHPFVLAALFSGVGIALGNEYVLAGL
                     HFAFSSQTLWQGAGALSGMMLIALTLLMPSKKHAIAPMPLAKTEQQIMSWWLLAILYG
                     LAGFGYIIVATYLPLMAKDAGSPLLTAHLWTLVGLSIVPGCFGWLWAAKRWGALPCLT
                     ANLLVQAISVLLTLASDSPLLLIISSIGFGGTFMGTTSLVMTIARQLSVPGNLNLLGF
                     VTLIYGIGQILGPALTSMLGNGTSALAGATLCGAAALFIAALISTVQLFKLQVVTS"
     gene            complement(8397..9054)
                     /gene="kptA"
                     /locus_tag="JN001_002259"
                     /pseudo
     CDS             complement(8397..9054)
                     /gene="kptA"
                     /locus_tag="JN001_002259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709901.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2'-phosphotransferase"
     gene            9202..9884
                     /locus_tag="JN001_002260"
                     /pseudo
     CDS             9202..9884
                     /locus_tag="JN001_002260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418750.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            9881..10342
                     /locus_tag="JN001_002261"
     CDS             9881..10342
                     /locus_tag="JN001_002261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053478.1"
                     /translation="MTTQVRKNVMDMFIDGARRGFTIATTNLLPNVVMAFVIIQALKI
                     TGLLDWVGHICEPVMALWGLPGEAATVLLAALMSMGGAVGVAASLATAGALTGHDVTV
                     LLPAMYLMGNPVQNVGRCLGTAEVNAKYYPHIITVCVINALLSIWVMQLIV"
     gene            10355..11527
                     /gene="iadA"
                     /locus_tag="JN001_002262"
     CDS             10355..11527
                     /gene="iadA"
                     /locus_tag="JN001_002262"
                     /EC_number="3.4.19.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-aspartyl-peptidase"
                     /protein_id="HAY9053479.1"
                     /translation="MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPS
                     DIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVG
                     LLGTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDVAIIDRVIG
                     VKCAISDHRSAAPDVYHLANMAAESRVGGLLGSKPGVTVFHMGDSKKALQPIYDLLEN
                     CDVPISKLLPTHVNRNVPLFEQALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIP
                     LARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTS
                     SVAGFLNLSGKGEILPGNDADLLVMTPELRIEQVYARGKLMVKDGKACVKGTFETA"
     gene            11592..12515
                     /gene="hypT"
                     /locus_tag="JN001_002263"
                     /gene_synonym="qseD"
     CDS             11592..12515
                     /gene="hypT"
                     /locus_tag="JN001_002263"
                     /gene_synonym="qseD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypochlorite stress DNA-binding transcriptional
                     regulator HypT"
                     /protein_id="HAY9053480.1"
                     /translation="MDDCCAVLHNIETKWLYDFLTLEKCRNFSQAAVSRNVSQPAFSR
                     RIRALEQAIGVELFNRQVTPLQLSEQGKIFHSQIRHLLQQLESNLAELRGGSDYAQRK
                     IKIAAAHSLSLGLLPSIISQMPPLFTWVFTWAIEAIDVDEAVDKLREGQSDCIFSFHD
                     EDLLEAPFDHIRLFESQLFPVCASDEYGEAIFNLAQPHFPLLNYSRNSYMGRLINRTL
                     TRHSELSFSTFFVSSMSELLKQVALDGCGIAWLPEYAIQQEIRSGQLVVLNRDELVIP
                     IQAYAYRMNTRMNPVAERFWRELRELEIVLS"
     gene            complement(12508..12900)
                     /gene="iraD"
                     /locus_tag="JN001_002264"
     CDS             complement(12508..12900)
                     /gene="iraD"
                     /locus_tag="JN001_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313312.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraD"
                     /protein_id="HAY9053481.1"
                     /translation="MMRQSLQAVLPEISGNKTSLLRKSVCSDLLTLFNSPHSALPSLL
                     VSGMPEWQVHNPSDKHLQSWYCRQLRSALLFHEPRIAALQVNLKEAYCHTLAISLEIM
                     LYHDDEPLTFDLVWDNGGWRSATLENVS"
     gene            complement(12897..12980)
                     /locus_tag="JN001_002265"
     CDS             complement(12897..12980)
                     /locus_tag="JN001_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iraD leader peptide"
                     /protein_id="HAY9053482.1"
                     /translation="MENEHQYSGARCSGQAAYVAKRQECAK"
     gene            13572..14402
                     /locus_tag="JN001_002266"
     CDS             13572..14402
                     /locus_tag="JN001_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY9053483.1"
                     /translation="MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIY
                     LLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKI
                     TSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
                     GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGN
                     DPIIGIEAYPGTAEIHAKMGYNVIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
                     "
     gene            complement(14543..15316)
                     /gene="uxuR"
                     /locus_tag="JN001_002267"
     CDS             complement(14543..15316)
                     /gene="uxuR"
                     /locus_tag="JN001_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Uxu operon transcriptional regulator"
                     /protein_id="HAY9053484.1"
                     /translation="MKSATSAQRPYQEVGAMIRDLIIKTPYNPGERLPPEREIAEMLD
                     VTRTVVREALIMLEIKGLVEVRRGAGIYVLDSSGSHNTDSPDANVCNDAGPFELLQAR
                     QLLESNIAEFAALQATREDIVKMRQALQLEERELASSAPGSSESGDMQFHLAIAEATH
                     NSMLVELFRQSWQWRENNPMWIQLHSHLDDSLYRKEWLGDHKQILAALIKKDARAAKL
                     AMWQHLENVKQRLLEFSNVDDIYFDGYLFDSWPLDKVDA"
     gene            complement(15531..16991)
                     /locus_tag="JN001_002268"
     CDS             complement(15531..16991)
                     /locus_tag="JN001_002268"
                     /EC_number="1.1.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructuronate reductase"
                     /protein_id="HAY9053485.1"
                     /translation="MTTIVDSNLPVARPSWDHSRLESRIVHLGCGAFHRAHQALYTHH
                     LLESTDSDWGICEVNLMPGNDRVLIENLKKQQLLYTVAEKGAESTELKIIGSMKEALH
                     PEIDGCEGILNAMARPQTAIVSLTVTEKGYCADAASGQLDLNNPLIKHDLENPTAPKS
                     AIGYIVEALRLRREKGLKAFTVMSCDNVRENGHVAKVAVLGLAQARDPQLAAWIEENV
                     TFPCTMVDRIVPAATPETLQEIADQLGVYDPCAIACEPFRQWVIEDNFVNGRPDWDKV
                     GTQFVADVVPFEMMKLRMLNGSHSFLAYLGYLGGYETIADTMTNPDYRKAAFALMMQE
                     QAPTLSMPEGTDLKAYATLLIERFSNPSLRHRTWQIAMDGSQKLPQRLLDPVRLHLQN
                     GGSWRHLALGVAGWMRYTQGVDEQGNAIDVVDPMLAEFQKINAQYQGADRVKALLGLS
                     GIFADDLPQNADFVGAVTAAYQQLCERGARECVAAL"
     gene            complement(17072..18256)
                     /gene="uxuA"
                     /locus_tag="JN001_002269"
     CDS             complement(17072..18256)
                     /gene="uxuA"
                     /locus_tag="JN001_002269"
                     /EC_number="4.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709912.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannonate dehydratase"
                     /protein_id="HAY9053486.1"
                     /translation="MEQTWRWYGPNDLVSLADVRQAGATGVVTALHHIPNGEVWSVEE
                     ILKRKAIVEDAGLVWSVVESVPIHEDIKTHTGNYEQWIANYQQTLRNLAQCGIRTVCY
                     NFMPVLDWTRTDLEYVLPDGSKALRFDQIEFAAFEMHILKRPGAEADYTEEEIAQAAE
                     RFATMSDEDKARLTRNIIAGLPGAEEGYTLDQFRKHLELYKDIDKAKLRENFAVFLKA
                     IIPVAEEVGVRMAVHPDDPPRPILGLPRIVSTIEDMQWMVDTVNSMANGFTMCTGSYG
                     VRADNDLVDMIKQFGPRIYFTHLRSTMREDNPKTFHEAAHLNGDVDMYEVVKAIVEEE
                     HRRKAEGKEDLIPMRPDHGHQMLDDLKKKTNPGYSAIGRLKGLAEVRGVELAIQRAFF
                     SR"
     gene            18596..18800
                     /locus_tag="JN001_002270"
                     /pseudo
     CDS             18596..18800
                     /locus_tag="JN001_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003031542.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(19043..>19152)
                     /locus_tag="JN001_002271"
     CDS             complement(19043..>19152)
                     /locus_tag="JN001_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9053487.1"
                     /translation="TSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ"
BASE COUNT         4473 a         4869 c         4807 g         5003 t
ORIGIN      
        1 ctaatgcctg catttgctct gccgaaagtc cggtatatcg ttgtatccat tcaggatcgg
       61 ccccattctg caacaacaat cggaggaggc tccgttcccc ttctactttc ccttctttcc
      121 tccccctctc ccttcccaac agccatccat cattatgaat tcgctctgca attgtcatta
      181 ttcgctccct gtggtgtggc attcgcctgg taagttcgct gataaacgcc ttaaaacgcg
      241 cttcatcgcc agtcagtaaa atgtaattta acagcgcagt tatctggctg tcattagcac
      301 actctgtaac cagtaatact accagttggt caataagccc catcaaatcg cgctggcgaa
      361 tatgcttttg gatcaactcc aacagggcga ctctgcgatg ctgcacaatc tcgtcgtctg
      421 gcacgacagt gacatccacc agcgggaacg ctgcgctata aagtttccgt gcggtagtcg
      481 gggcggcaaa ttcgtccagc cagcacaggg accaggggta aggactacgg ctaccgtgat
      541 aaaacagcat cgggataacc agcggtagcg gccggcgttt atcatgctcg atatggcgct
      601 gcatcaccgc catggaatat cgcatcaggc gaaatgccat atgaatatcc tcgcggctct
      661 gatgttcaat cactacgtaa atataaccat caccttcacg ggtctttacc gaccacagaa
      721 tatcggagtg tagcgcccgc aatttttcat cgacaaagct ggcggattcc agttttaagc
      781 tgtcgagatc gcacagttca cgtaaatctt tgggtaagtg gatctccata aaatcccgcg
      841 cggtgtcagg gtgagtgaga aaggatttaa ataatgcgtc atgtggcgtg ctggtcgtga
      901 agtttgtcat ggcgatccgt cacctgtaga taagatggcc cgactttagc gactaacaaa
      961 accattctca cccggcaatt tctcgttccc cgaggtgctt tccaggcgtc tgcaaacgat
     1021 acatttttcc ggaaacaggc tcgcgtttta catttcctgt acccggcaga tattcccctt
     1081 tccaccgcgc tcttttgatt aaccgcaaat tttaattaca cttaaggtgt atattttcta
     1141 tgcaacccat caattaaaga ggtgtaatgt gctgatgact atttgtaatc gttatacatt
     1201 ctgacctgga gtcagaaggt atttctctgt ctgtgtgttc acaggcagtg tggttgatta
     1261 catgaaattc agtacatttg cagtctcgtt gcccttctcg cctgcctttc gtcattaccg
     1321 acggtattga atttcgtttt ccccgttggg gttctccgaa caaggagttg tttgttatgc
     1381 cacgtttttt tgcccgccat gccgccacgc tgtttttccc gatggcgttg attttgtatg
     1441 actttgccgc gtacctgtcg acggatctga tccagccggg gatcattaat gtggtccgtg
     1501 attttaatgc cgatgtcagt ctggccccgg cagccgtcag tctctatctc gcgggcggta
     1561 tggcgttaca gtggctgctg gggccgcttt ccgacaggat tggccgcagg ccggtgctga
     1621 ttaccggggc gctaatattt acccttgcct gcgctgcgac aatgttcaca acgtctatga
     1681 cacagtttct tatcgcgcgt gcaattcagg gcaccagtat ctgttttatt gccaccgttg
     1741 gttatgtcac ggtgcaggag gcgttcggcc agacaaaagg gatcaagttg atggcgatta
     1801 tcacctccat cgtactgatt gcgccgatta ttggcccgct ttccggcgca gctctgatgc
     1861 actttgtgca ctggaaagtc ctttttgcca tcattgcagt tatgggtttt atctcatttg
     1921 ttggcttact gctggcgatg ccagagacgg tgaagcgcgg cgcggttcca tttagcgcca
     1981 aaagcgtctt tcgcgatttt cgtaatgtct tttgcaatcg gctgttcctc tttggcgcag
     2041 caaccatctc tttaagctat atcccaatga tgagttgggt ggctgtctcg ccggtgatcc
     2101 tgatcgacgc gggcagctta acaacttcgc agttcgcctg gacacaggtt ccggtgttcg
     2161 gcgcggtgat tgtcgcgaat gccatcgtgg cgcgtttcgt taaagatccg accgaaccgc
     2221 gctttatctg gcgtgctgta cccattcaac tggtcggcct cgcgctgttg attatcggca
     2281 atctgctgtc accgcacgtc tggctgtggt cggtgctggg caccagtttg tatgctttcg
     2341 ggattggttt gatcttcccg accttattcc gctttacgct tttttccaat aacttaccga
     2401 aagggaccgt ctccgcatcg ctgaatatgg tgatcctgat ggtgatgtct gtctcggtcg
     2461 aaatcggccg ctggctgtgg tttaacggcg gtcgcttgcc gtttcatctg ttagccgtcg
     2521 tggcgggcgt tatcgtcgtt ttcaccctgg caggattgct taatcgcgtg cgccaacatc
     2581 aggctgccga gctggcggag gagcggtgat ttttgcgcga tcctgccgtc aggctctatt
     2641 cttaacgtta tgaataaact cattgaactc agacgcgcca aaatgttggc gctctcttta
     2701 ctgcttatcg ccgctgctac ctttgtcgtt acgctgtttt tgccgcccaa tttttgggtg
     2761 agcggcgtga aggcgattgc tgaagcggcg atggtcggcg cgctggcgga ctggtttgcg
     2821 gtggtggcgc tgtttcgccg cgtgccgatt ccgatcattt ctcgtcatac ggcgattatc
     2881 ccgcgtaata aagaccggat tggcgaaaat ctcggtcagt tcgtgcagga aaaatttctc
     2941 gatacccagt cgctggtggc attgattcga cgtcacgaac cggcgttgtt gattggcaac
     3001 tggtttagtc agccggagaa cgcccgccgc gttggtcagc atctgttgca gatcatgagc
     3061 ggttttcttg aactgaccga tgatgcgcgt attcagcgcc tgcttaagcg cgcggtccat
     3121 cgggcgattg ataaggtcga tctttccgga accagtgcgt tgatgctgga gagtatgacc
     3181 aaaaacgatc gtcatcaggt gctgctcgat acgctgatcg cacagttgat cgcccttctc
     3241 cagcgcgata aatcgcgcaa gtttattgcc cagcaaattg ttcgctggct ggagagcgag
     3301 catccgctga aagccaaaat tttgcctact gaatggctgg gcgaacatag cgcggagttg
     3361 gtttctgacg cggtgaattc tttgcttgat gatatcagcc gcgatcgtgc gcatcagatc
     3421 cgtcatgcgt ttgatcgcgc cacttttgcc ctgatcgaca agctgaaaaa cgatccagaa
     3481 atggcagcgc gagccgatgc cgtaaaaagt tatctgaaag aagatgaagc ttttaaccgc
     3541 tatctcagtg aattgtgggg ggatttacgg gaatggctga aagcggatat caacagtgaa
     3601 gattctcgtg tgaaagaacg tatcgcgcgg gcgggtcaat ggtttggcga aacgttaatt
     3661 gccgatgatg ccttgcgggc atcgttaaat ggtcacctgg aacaagccgc gcaccgcgtc
     3721 gcgcctgagt tttccgcatt cctgacgcgc cacatcagcg atacagtaaa aagctgggat
     3781 gctcgggata tgtcgcggca aatcgagtta aatatcggca aagatctgca gtttatccgt
     3841 gtcaacggta cgctggttgg cggttgtatt gggctaattt tatatttgtt gtcgcagctc
     3901 ccggccttgt tccccctcag caatttttag aaatccatga aaaactaagt ggctaaccgc
     3961 gagagagatc aaataaacca cactaaaaga atggtaataa tgtggcctct tttcattatc
     4021 tcccgtggta cggggaagga aaatcatgtc acttatcacc gatctacccg ccattttcga
     4081 tcagttctct gaagctcgcc agaaaggctt tctcaccgtc atggatctca aggagcgcgg
     4141 cattccgctg gttggcactt actgcacctt tatgccgcaa gagatcccga tggcagccgg
     4201 tgcggttgtg gtttcgctct gttctacctc tgatgaaacc attgaagaag cggagaaaga
     4261 tctgccgcgc aacctctgcc cgctgattaa aagcagctac ggcttcggca aaaccgataa
     4321 atgcccctac ttctactttt cggatctggt ggtcggtgaa accacctgcg acggcaaaaa
     4381 gaaaatgtat gaatacatgg cggagtttaa gcccgttcat gtgatgcagt tgccgaacag
     4441 cgttaaggac gatgcctcgc gtgcgttatg gaaagccgag atgctgcgct tgcaaaaaac
     4501 ggtagaagaa cgttttgggc acgagattag cgaagatgct ctgcgcgatg ccattgcgct
     4561 gaaaaaccgc gaacgtcgcg cactggccaa tttttatcat cttgggcagt taaatcctcc
     4621 ggcgcttagc ggcagcgaca ttctgaaagt ggtctacggc gcaaccttcc ggttcgataa
     4681 agaggcgttg atcaatgaac tggatgcaat gaccgcccgc gttcgtcagc agtgggaaga
     4741 aggccagcga ctggacccgc gtccacgcat tttaatcacc ggctgcccga ttggcggcgc
     4801 agcagaaaaa gtggtgcggg cgattgaaga gaatggcggc tgggttgtcg gttatgaaaa
     4861 ctgcactggg gcgaaagcga ccgagctaat gcgtggcgga aacgggcgat gtctacgacg
     4921 cgctggcgga taaatatctg gcgattggct gctcctgtgt ttcgccgaac gatcagcgcc
     4981 tgcaaatgct cagccagatg gtggaagaat atcaggtcga tggcgtagtt gatgtgattt
     5041 tgcaggcgtg ccatacctac gcggtggaat cgctggcgat taaacgtcat gtgcgtcagc
     5101 agcacaacat tccttatatc gctattgaaa cagactactc cacctcagat gtcgggcagc
     5161 tcagtacccg tgtcgcggcc tttattgaga tgctgtaagg agtggcagtg acatattcga
     5221 ttggcattga ttctggttct accgccacca aagggatctt actggcagac ggcgtgatta
     5281 cgcgccgttt cctcgttcca acaccctttc gtccggcaac agcaattact gaagcctggg
     5341 aaactctgcg cgaagggtta gagacaacgc cgtttctgac gctcaccggc tatggacggc
     5401 aactggtgga ttttgccgat aaacaagtga cggaaatctc ctgtcacggg ctgggcgcac
     5461 ggtttcacgc tgcgcggtaa tcgacatcgg tggtcaggac agcaaagtga ttcagcttga
     5521 tgatgacggt aacctgtgcg atttcctgat gaatgacaaa tgcgcggcgg gcaccgggcg
     5581 tttcctggaa gtgatctcgc gcacgcttgg caccagcgtc gagcaactcg acagcattac
     5641 cgaaaatgtc acgccgcatg ccatcacgag tatgtgcaca gtgtttgccg aatcagaagt
     5701 gatcagcctg cgctcagcgg gcgtcgcgcc agaagcgatt ctcgccggag tgattaacgc
     5761 gatggcgcgg aggagtgcca atttcattgc tcgtctctcc tgtgaagcgc cgattctgtt
     5821 tactggtggc gttagtcatt gccagacgtt tgcccggatg ctggaatctc acctgggaat
     5881 gccggtaaat acccatcctg atgcgcaatt tgctggcgca attggcgcgg cggtaattgg
     5941 tcaacgagtg aggacacgcc gatgaaagag tttttatttt tatttcactc cacagtcggc
     6001 gtcatacaaa ctcgcaaagc gttgcaggca gcgggcatga cttttcgcgt cagcgatatt
     6061 ccccgtgatt tacgcggcgg ctgcgggtta tgcatttggc tgacctgtcc ccccggcgaa
     6121 gaaatacaat gggtgatccc tgggctgact gagtcaattt attgccagca ggatggtgtc
     6181 tggcgctgca ttgcacatta ccgggtttct ccgcgttaag gattcattaa ggtcgctacg
     6241 tatacttctc gatatcttat tgatttgcct taaagggatt accgtgacaa aaagtatttc
     6301 gttaagtaaa cgcatctccg ttattgtgat tctttttgcc attgtggcag tgtgtacttt
     6361 cttcgtgcaa tcttgcgccc gtaaaagcaa tcatgcagca tcatttcaga attaccacgc
     6421 caccattgac ggcaaagaaa ttgcaggcat aacgaataat atctcttcgc tgacctggtc
     6481 ggcacaaagc aatactcttt ttagcactat caacaaacct gccgccattg ttgaaatgac
     6541 caccaatggt gattttatcc gcacaattcc tctggatttt gttaaggatc tcgagacgat
     6601 cgaatacatt ggcgataatc agtttgtcat tagcgatgag cgcgattacg ccatttatgt
     6661 gatttcactg accccaaact cggaagtaaa aatcctcaaa aaaataaaaa tcccgctgca
     6721 agactcccca accaattgcg gttttgaagg gttagcttat tctcgccagg atcacacttt
     6781 ctggtttttt aaagagaaaa atccgattga ggtctacaaa gttaacgggc tgttaagtag
     6841 caatgaatta cacatcagca aagacgaggc actacaacgg caatttactt tagatgatgt
     6901 gtccggcgca gaatttaacc agcaaaaaaa tacgcttctg gtgctgtctc atgaatctcg
     6961 cgcactccag gaagtaaccc tggttggcga ggttatcggt gaaatatcac taaccaaagg
     7021 tagtcgaggt ttgtcgcata acatcaaaca ggccgaaggg attgcgatgg atgcctctgg
     7081 taatatttat atcgttagcg aaccaaatcg tttttatcgc tttaccccta aatcatcgca
     7141 ttaacaggct ggcatatttc acctttttgt tattaacttg ttaacaacaa aaatgacata
     7201 caaggttaaa catgccttcg tcctcgcatc ccgtagaacg cttttctttc agcaccgcgc
     7261 ttttcgggat gctggttctg accctaggta tgggattagg tcgcttcctt tatacgccta
     7321 tgttgcccgt cattatggcg gaaggggcgt tttcatttag ccagctctcg tggattgcca
     7381 gcggcaacta tgcggggtat ctggctggca gtctgctatt ttcgtttggc gcatttcacc
     7441 agccgtcgcg cctacgccca tttctgttgg tttctgccct ggcgagaggg ttgttgatcc
     7501 tcgcaatggc atggttgccg ccatttattc tggtgttatt gattcgcttc ctggcgggtg
     7561 tcgccagcgc cggtatgctg atttttggtt cgacgctgat tatgcagcac acgcgccatc
     7621 cttttgtgct ggcagctttg ttttctggcg ttggcattgc actgggcaac gaatatgttc
     7681 tggcaggcct gcattttgcc ttctcctcgc aaacgttatg gcaaggcgcc ggggcgcttt
     7741 ctggcatgat gctgattgca cttacgcttt taatgccctc gaaaaaacac gccatcgcac
     7801 caatgccatt ggcaaaaacg gagcaacaga taatgagctg gtggttactg gctattctgt
     7861 acggccttgc gggatttggt tatatcatcg tcgcgactta cctgccgctc atggcgaaag
     7921 atgcaggctc accattgtta accgcccatc tctggacgtt agtcggctta tcaattgtgc
     7981 caggctgctt tggctggcta tgggcagcaa aacgttgggg ggctttgcct tgcctgacgg
     8041 cgaatttgct ggtgcaggct atcagtgtgc tgcttactct cgccagcgac tctcctctct
     8101 tgcttatcat tagtagtatc ggttttggcg gtacctttat gggcacgaca tctctggtga
     8161 tgactatcgc ccgccaactg agcgttccgg gaaatctcaa tcttttaggc tttgtgacgc
     8221 tcatttacgg cattggacaa atcctcggcc cggcgctgac cagtatgctc ggcaatggaa
     8281 catcggcgct tgccggcgcc actctctgcg gcgcggcggc gttgtttatt gctgcgctta
     8341 tcagcacagt acaattattt aagctgcaag tggtcacttc atgaggagtg tttcccttac
     8401 cactcaagaa attcgaccgc aaccgttgat gtcagccaga ctccgttttc cgcttgccag
     8461 aaaggaatgc ctcgtttcgc catttcctgt gctttgacgg ttaagacaac cggcgatccg
     8521 tgtcttgctc ccactttgcg tgccgttgct tcatcagcag agagatgcac gtaatgacga
     8581 tcccctgcaa tcagcccctg ttttttttat ctcgtcaagg aaacggcttg ccgtaccgtg
     8641 gtagagaaac tgtggcggtg ttttttcggc aaaggaaata gcgacctgcg aagtcgaatg
     8701 cccctgaacc gcgcggatgc acctaccatc actggaataa ctaaaacgct ttttatcgct
     8761 ggttgcgacc acggtatcca gcaatgcacg ggttaatcgc ttgcccgctt tttgggcaca
     8821 aagtatgagc ttatcgatat ccgcccatcc ttcacggtcc agtacgatac caatcgcctc
     8881 cggtttgtgt cggaggacaa aacttaaaaa cttgctcgta tccgccagct ctttttcgtt
     8941 gtgctttgcc atctcgtttt cgtccctgga ttttctgttt ttatttacca atgtcattgt
     9001 cactgggttt atgaattttc tgcaactcaa tcctgcgcag aaccttttcc acacagcgta
     9061 atgtttcccc tatgcaaaaa acgcatagcc agaaacatac ttgcattttc cccataccca
     9121 catggctgat aaggtttttc agttccagga attttcctgg ctcaagcaac acacaaacac
     9181 aaaaaaacaa tggggattgt tatgacacaa caaggggatg ctgtagccgg ggagctggcg
     9241 acagaaaaag tgggcattaa agggtatctg gctttttttc tcaccataat cttttttccg
     9301 gtgttttttc cggaacagac agctggtggc gcgtttttga tttttccgtt ctgaacggat
     9361 cgtttgggca actgcctggt gcgaacggag ccaccacctc atttcgcggc gcgggtggtg
     9421 cgggggctaa agatggcttt ctctttgcgc tggagctggc accgtcagtc attctctctc
     9481 tggggattat ttcaattacc gatggtcttg gtggattacg cgccgcgcag cagttaatga
     9541 cacctgtgct aaaaccgttg ttgggcattc cagggatctg ctcgctggcg ctgatcgcta
     9601 acttgcaaaa cactgatgcc gccgccggta tgaccaaaga gctggcgcag gaaggtgaaa
     9661 ttaccgaacg cgataaagtg attttcgccg catatcaaac cagcggtagc gccatcatca
     9721 ccaactactt ctcttccggc gtcgcggtgt tcgcctttct gggcacgtcc gtaatcgtac
     9781 ctttagccgt catcctggtg tttaaatttg tcggagccaa cattttgcgc gtctggctta
     9841 acttcgaaga acgtcgcaac ccaacgcaag gagcgcaagc atgacaactc aggtccgcaa
     9901 aaacgtcatg gatatgttta tcgatggcgc gcgccgtggc tttactatcg ccacgaccaa
     9961 cctgctgcca aacgtggtga tggcgtttgt catcattcag gcgctgaaaa ttaccggcct
    10021 gctcgactgg gtggggcata tctgtgaacc cgtaatggcg ctgtggggat tacccggtga
    10081 agcggcaacc gtccttttag ccgcattaat gagtatgggg ggcgcagtcg gtgttgccgc
    10141 cagtctggca accgctggcg cattaaccgg tcacgatgtc accgttttac tgcccgcgat
    10201 gtatttaatg ggcaacccgg tgcaaaatgt cggtcgctgc ctggggacag ccgaagtgaa
    10261 tgccaaatat tacccgcata tcattacggt ctgcgtgatt aacgcattgc tgtcgatctg
    10321 ggttatgcag cttattgttt aacaaggagt taccatgatt gattataccg cagccggttt
    10381 taccctgctg cagggagcgc atttgtatgc gccggaagat cggggaattt gcgatgtcct
    10441 cgtcgctaac ggcaaaatta tcgccgttgc cagcaatatc ccttctgaca ttgtaccgaa
    10501 ctgcacggtt gtcgatctca gtgggcagat cctctgccca ggttttattg atcaacacgt
    10561 ccatttgatt ggcggtggcg gcgaagcagg tcccacgacg cgcacgccgg aagtggcgct
    10621 aagtcgcctg acggaagcgg gcgtcacgtc agtggttggt ctgctgggca ccgactctat
    10681 ctctcgccac ccggaatccc tgctcgccaa gacccgtgcg ctcaatgaag aaggcatcag
    10741 cgcctggatg ctgaccggcg cttatcatgt cccttcccgc actattacgg gttccgtgga
    10801 aaaagacgtg gcgattatcg atcgtgtgat tggcgtgaaa tgcgccatct ctgatcaccg
    10861 ttctgccgca ccggacgttt atcacctggc taatatggcg gcagaatccc gcgttggcgg
    10921 tttgctcggc agtaaacctg gcgtcaccgt gttccacatg ggcgacagta aaaaggcgtt
    10981 acagcctatt tatgacctgc tggaaaactg cgatgtgccg atcagcaagc tgctgccgac
    11041 ccacgttaac cgcaacgtac cgttgtttga gcaggcgctg gagttcgcgc gcaaaggcgg
    11101 caccatcgat atcaccagca gcattgacga accggtcgcc cctgccgaag gtattgcccg
    11161 cgccgttcag gcgggtattc cgctggcacg cgtcaccctc agctccgacg gcaacggtag
    11221 ccagccgttc ttcgatgacg aagggaattt aacccatatc ggtgttgcag gttttgaaac
    11281 gttgctggaa accgtgcagg tgctggtcaa agactatgat ttcagtatca gcgatgccct
    11341 gcgcccgctc accagtagcg tagccggttt ccttaacctg agcgggaaag gcgaaattct
    11401 gcctggcaat gacgcagact tactagtcat gacgccagaa ttgcgcattg agcaggtata
    11461 tgctcgcggc aaactgatgg tcaaagacgg caaagcctgc gtgaaaggaa cgtttgaaac
    11521 ggcttaaacg gttgtcagcc gccctaatgg acgtagaatg cccgcaaggg cggctgacag
    11581 agtaaaacgt aatggatgac tgttgtgcgg ttttgcataa tattgaaacc aaatggcttt
    11641 atgattttct gaccctggaa aaatgccgca atttttccca ggcggcagtc agtcgtaacg
    11701 tctcgcaacc ggcattcagc cgccgcatcc gcgcgctgga acaggcgatt ggcgttgaat
    11761 tgtttaaccg ccaggtgacg ccgctgcaac tctcagaaca agggaaaatc ttccattcgc
    11821 agatccgcca tctgttgcaa cagttagaaa gtaaccttgc agagctgcgt ggcggcagcg
    11881 attacgcgca acgtaaaatc aagatagccg ctgcacactc tctttccctc ggtctgttac
    11941 cgtccattat cagccagatg ccgccgctct ttacctgggt ctttacctgg gcgattgaag
    12001 ctattgatgt cgatgaagca gtcgataaac tgcgtgaagg gcaaagtgac tgtatttttt
    12061 cctttcacga cgaagatttg ctggaagcac cgtttgacca cattcgctta tttgaatctc
    12121 aattgttccc cgtttgcgcc agtgacgaat acggagaagc aatttttaac ctcgcgcagc
    12181 cacactttcc gttactgaat tacagccgca actcctacat ggggcgattg attaatcgca
    12241 ccctgacgcg ccacagcgag ttaagtttca gcaccttttt tgtctcttcg atgagcgagc
    12301 tattaaagca ggttgccctc gacggctgtg ggattgcctg gctgccggag tatgccatcc
    12361 aacaagaaat tcgcagcggg caactcgttg tgctgaatcg ggacgaactg gtgatcccga
    12421 ttcaggccta cgcataccgt atgaataccc gcatgaatcc agttgccgaa cgcttctggc
    12481 gtgaactgcg cgagctggag attgtgctta gctgacattc tcaagcgtcg cactgcgcca
    12541 accgccatta tcccagacca gatcaaacgt tagcggttca tcgtcgtggt acagcattat
    12601 ctcaaggctg atcgccagag tgtggcagta cgcttctttc aaattaacct gcaacgccgc
    12661 aatccgtggc tcatgaaata acagtgcaga acgcagctga cggcaatacc agctctggag
    12721 atgtttgtcg ctcgggttat gcacttgcca ctcgggcatg cctgaaacaa gtaatgacgg
    12781 taatgccgaa tgaggagaat taaaaagagt gaggagatcg ctgcataccg atttacgcag
    12841 caatgacgtt ttattgcctg aaatttcagg taaaacagcc tgaagtgatt ggcgcatcat
    12901 tttgcgcact cctgacgttt agcaacatat gcggcttgcc ctgaacaccg ggcaccactg
    12961 tattgatgct cattttccat agccattccc ttttgttcat tacatccatg tcagtctgag
    13021 acaggcctga atcctgtcag caaagtataa aaccttactt gcctatgaat atctactgac
    13081 ttttcaggaa aaaagtcatg atttgataaa aatcatcaaa ctcaaaaaaa aaccgctagt
    13141 atattctgaa tattccgaat agttacgtag atgaaaatac ttgtcaccgc cgctacttaa
    13201 ttccggtggg aaattattta tttccgcata atcagccatg tattatttga aacaattagt
    13261 ttgtaaataa tataaattga taacatatca aatacatcaa aaataccatt cataggcatt
    13321 attaatatag acatcaatat agcaacatca aattccaatt agtaataaga tatgcttttt
    13381 aattgcatga aaataatttc aaatgagcgt tttttgatac tttagagtgt ttcctaccct
    13441 ttaatatcac cgtgtagagt tgatatcact acaacagaaa catgcatgtc atttttttac
    13501 ttctttttta ctacagaaaa atttatctat ttttctaaac atcggtgaaa tactcataaa
    13561 aggtaactat tatgtctatg ccattaagca atgcccttca gagtcaaatt attacagata
    13621 atcacttcct tcatcatcca aaagtcgaca ataagttaac acgtgaatat gaatatacac
    13681 gcatggatac ggaaaatatc tatcttctgc ctcttactcg tggaaataac cataattacg
    13741 atggaaaaag cgttgtcgaa attagaaaac ttaatattgg caaacagtcc tggccattta
    13801 attatgcgac agatacatgc agagaattca atggtattac aacaacagga cgtatgctct
    13861 atcgaaactt gaaaatcacc tcagctttag acgaaatata tggtggcata tgtaaaaagg
    13921 cgcatgctgc tacagagtta gcagaaggtt tacggctaaa tttatttatg aagagccctt
    13981 tcgatcctgt tgaggactat acagttcatg aaataacatt aggccctggt tacaatgttc
    14041 ctggttatgc cggaaccacg ataggatata tttcaaccct tccagcttct caggcaaaaa
    14101 gatggaccaa tgagcagcca agaattgata tctatattga tcagataata actgtctcag
    14161 gggtggcaaa ttcttccgga ttcgcccttg ccgcattact taatgctaat attggaatgg
    14221 gaaatgaccc aataattggt atagaagcct atcctggtac cgcggagatc catgcaaaaa
    14281 tgggatataa cgttatcccc ggtgatgaag atgcgccact caaacgcatg actctgcaac
    14341 cgtcatctct tccagaactg tttgaattaa aaaatggtga atggaattat attggcaaat
    14401 aaccactgag aagaatgagt actaacattc aggttatata gatatttaaa caataccctg
    14461 caatttacaa agtaatactc attgcgactt cttaatttaa gaaagcgcaa ggaacgttta
    14521 cccttgcgct tatcataatc agtcaggcgt cgactttatc cagcggccat gaatcaaaca
    14581 gatagccgtc aaaataaata tcgtcaacgt tcgagaattc cagcagacgt tgcttaacgt
    14641 tttccagatg ctgccacatt gccagcttcg ccgctcgggc atcttttttg attaacgcgg
    14701 caaggatctg tttgtgatcg cccaaccact ctttgcgata caggctgtca tccagatggc
    14761 tgtgcaactg gatccacatt ggattgtttt cccgccactg ccaggactga cggaataact
    14821 ccaccagcat gctgttatgc gttgcttcag caatggcgag atggaactgc atgtcaccgc
    14881 tttcgctgct acccggcgcg ctggaagcca gttcacgctc ttccagttgc aatgcctgac
    14941 gcattttgac gatatcttcg cgggtagcct gcagggcggc aaattccgcg atgttgctct
    15001 caagaagctg tcgcgcctgc aacaattcaa aggggccggc atcattgcag acgttggcat
    15061 ccggactgtc tgtgttgtgg ctgcctgagc tatcaagaac atagataccg gcaccccggc
    15121 gcacttccac cagccctttg atctccagca tgatcagcgc ttcacgtacc accgtccgcg
    15181 tgacatcaag catttctgca atttcacgct ccggcggcag ccgttcgcca ggattgtacg
    15241 gcgtctttat gatcagatcg cggatcatcg ccccgacttc ctggtaaggt ctttgcgcag
    15301 aggtggcaga tttcatggtg ttgtgtccgt taggtgcggt taatcaaatt tttgccggat
    15361 gcggcgtgaa cgccttatcc ggcctacaac gggcaatttt acggcccccg ttaatctcaa
    15421 actataccat tagcactgga agttagcacg tacaggtggg caaaaaaacg aaaactggtc
    15481 aaccaaatat cagtttgatt gaccagtaag tctgtagggt aatcagttag ttacagcgca
    15541 gccacacact cgcgcgcacc gcgttcgcac agctgctgat atgccgccgt caccgcgcca
    15601 acaaagtcgg cattctgcgg cagatcatcg gcaaaaatac cgctcaggcc cagcagcgct
    15661 ttcacgcggt ctgcgccctg atactgcgcg ttaatcttct ggaactcggc cagcatcggg
    15721 tcgaccacgt caatggcatt accctgctca tccacgccct gggtgtaacg catccagcca
    15781 gccacgccca gcgccaggtg acgccagctg ccgccatttt gcaggtgcag acgcaccggg
    15841 tccagcagac gctgcggtaa cttctggctg ccgtccatcg caatctgcca ggtacggtga
    15901 cgcagagacg ggttgctgaa acgctcgatc agcagcgtcg cataggcctt caggtccgta
    15961 ccctccggca tagacagcgt tggcgcttgt tcctgcatca tcagggcaaa ggccgctttg
    16021 cgataatccg ggttagtcat ggtgtcggca atagtttcat agccgccgag gtaaccgagg
    16081 tatgccagga aagagtggct gccgttcagc atacgcagct tcatcatttc gaacggcaca
    16141 acgtctgcaa cgaactgtgt gcccacttta tcccagtccg ggcgaccatt aacgaagtta
    16201 tcttcaatca cccactgacg gaacggttcg caggcaatgg cgcacgggtc gtaaacaccc
    16261 agctggtcag caatttcctg taaggtttct ggcgtcgccg ccggaacgat gcggtcaacc
    16321 atggtgcacg ggaaggtgac gttctcttca atccatgccg ccagctgcgg gtcacgtgcc
    16381 tgagccagcc ccagtaccgc gaccttcgcc acatgaccgt tttcacgcac gttatcgcag
    16441 gacatcaccg taaatgcttt cagccctttt tcacgacgca gacgcaaggc ttcgacgatg
    16501 taaccaatcg cggacttcgg cgcagtcggg ttttctagat cgtgcttgat cagcgggtta
    16561 ttgagatcca gttgaccgct tgccgcatca gcgcagtagc ctttttccgt gaccgttaga
    16621 gagacaatcg ccgtttgcgg acgcgccatc gcgttgagaa taccttcgca gccgtcgatt
    16681 tccggatgca gcgcttcttt catcgaaccg ataattttca gctcggtgct ttctgcgcct
    16741 ttttccgcta cggtgtacag cagttgctgt tttttcaggt tttcgatcag cacgcggtcg
    16801 ttgcctggca tcaggttaac ttcgcagatg ccccagtcgc tgtcggtgct ttccagcaga
    16861 tgatgggtat acagcgcctg atgtgcgcgg tgaaacgccc cgcaaccgag atgcacaatg
    16921 cgtgattcca gacgagaatg atcccatgac ggacgggcaa ccggcagatt gctgtcaaca
    16981 atagtagtca tcgtaaactc cagaatccgt cttcagagag tgacggcaag gaagaaggaa
    17041 ccggcacggc gcgcagccat gccggtggat attaacggct aaagaaagcg cgctggatcg
    17101 ccagttcgac accgcgaact tcggccaggc ctttcagacg accaattgcg gagtaacctg
    17161 ggttggtttt cttcttcagg tcgtccagca tctgatgacc gtggtccgga cgcatcggga
    17221 tcaggtcttc tttgccttcc gctttacgac ggtgttcttc ttcaacaatc gctttcacca
    17281 cttcgtacat atcaacgtca ccgttcaggt gcgccgcttc gtggaaggtt ttcgggttat
    17341 cttcacgcat ggtggagcgc agatgggtga agtaaatacg cggaccgaac tgcttgatca
    17401 tatcaaccag atcgttgtca gcacgcacgc cgtaggaacc ggtgcacatg gtgaaaccgt
    17461 tcgccatgct gtttacggta tcaaccatcc actgcatatc ttcaatggtg gaaacaatgc
    17521 gcggcaggcc gaggatcggg cgcggcggat cgtccgggtg aaccgccata cgcacgccaa
    17581 cttcttcagc aactggaata atcgctttca ggaagacggc aaagttttcg cgcagcttcg
    17641 ctttatcgat atctttgtac agctccaggt gcttacggaa ctggtcgagg gtataccctt
    17701 cttccgcgcc cggcagaccg gcaatgatgt tacgcgtcag acgcgctttg tcttcatcgc
    17761 tcatagtggc gaagcgttca gctgcctgag caatttcttc ttcggtgtaa tccgcttccg
    17821 cgcctggacg tttcaggata tgcatttcga atgcagcgaa ttcgatctgg tcgaagcgca
    17881 gagctttgga gccgtctggc agcacgtatt cgaggtcagt acgggtccag tcgagcaccg
    17941 gcatgaagtt gtagcacacg gtgcgaatgc cgcactgcgc caggttgcgc agagtctgct
    18001 gatagttagc gatccactgc tcatagttgc cagtgtgggt tttgatatct tcgtgaattg
    18061 gtacgctttc tacgacagac cacaccaggc ctgcgtcttc aacgatcgcc ttgcgtttga
    18121 ggatctcttc tacggaccat acttcgccgt tcgggatatg gtgcagcgcg gtaaccacgc
    18181 cagttgcgcc cgcctgacgg acatcagcta aagaaaccag atcgtttggg ccgtaccagc
    18241 gccaggtctg ttccatgatt tttcctcttt cacatagtgg gttccacagc aaagagacgc
    18301 ggaaccctgg agttgtttag gtatccggat gaacaaccag accgcagccg tggcgttgca
    18361 tcggatgaga tggcgtataa gttctacctt ttggtaagat atatcaaccc aaatcctgaa
    18421 attggttaac caaatcacaa gaatttcact ctcatggttg ttgctgcaaa ttgcagcaaa
    18481 aggtaatcga tggttattga tcagaggatg tgacattcat cgcaacaatg gttgaccaat
    18541 ttacataaca tgtcgcccaa aataacaacg gttcaaccag gtaaggtaaa acgttatgca
    18601 tgtgcttaac attctctggg tagtattcgg cattggtctg atgctggtac tgacaacgac
    18661 cgcaggttca gacacattca ctgcattagc aatgcctctt agattatttt gacctgtcag
    18721 taaaagacac gttgaaaacc tggggtctgc tggaactggt caactccgtg gttgggctga
    18781 ttattagcaa ggtagcgtaa aagaacacca gagcctgcca atggcaggct ctgactgatg
    18841 acaaagtcta aaaatgtgcc cggacagtcc cctcgcccct ccggggagag ggttagggtg
    18901 aggggaacag accagcaaag tgcgctttgt ttatgccaga tgcgacgctg acgcgtctta
    18961 tctggcctac aaagggctaa cgtgcaggtt tttagcttca ggtaatattg cgtaactgca
    19021 ttagcaatgc cctgtgattt ctttattgat aaacaaaagt cacgccaata atcgattgca
    19081 cattccctgc agtcacctgc cctccggtac gtgcgtaatt tgccgttaat cccagactta
    19141 ccgccgaagt tc
//
LOCUS       DADMJE010000073        19129 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.074, whole genome shotgun sequence.
ACCESSION   DADMJE010000073 DADMJE010000000
VERSION     DADMJE010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 19129)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19129)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19129
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.074"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(31..2478)
                     /gene="glgP"
                     /locus_tag="JN001_002272"
     CDS             complement(31..2478)
                     /gene="glgP"
                     /locus_tag="JN001_002272"
                     /EC_number="2.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen phosphorylase"
                     /protein_id="HAY9053488.1"
                     /translation="MNAPFTYSSPTLSVEALKHSIAYKLMFTIGKDPVVANKHEWLNA
                     TLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFLIGRTLSNAMLSLGIYEDVQGAL
                     EAMGLNLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI
                     VNGSQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQEGKKTRWIETEEILGVAYDQ
                     IIPGYDTDATNTLRLWSAQASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTY
                     SGRELRLRQEYFLVSSTIQDILSRHYQLHKTYDNLADKIAIHLNDTHPVLSIPEMMRL
                     LIDEHQFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYF
                     LKTLQEQYPNDTDLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLF
                     ADFAKIFPGRFTNVTNGVTPRRWLAVANPSLSAVLDEHLGRNWRTDLSLLNELQQHCD
                     FPMVNHAVHQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVI
                     TRYNRIKADPDAKWVPRVNIFGGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKV
                     VFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEML
                     DHVGADNIFIFGNTAEEVEELRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEDPGRY
                     RDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYELQEEWTAKAMLNIANMGYFSSDR
                     TIKEYADHIWHIDPVRL"
     gene            complement(2497..3930)
                     /gene="glgA"
                     /locus_tag="JN001_002273"
     CDS             complement(2497..3930)
                     /gene="glgA"
                     /locus_tag="JN001_002273"
                     /EC_number="2.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen synthase GlgA"
                     /protein_id="HAY9053489.1"
                     /translation="MQVLHVCSEMFPLLKTGGLADVIGALPAAQIADGVDARVLLPAF
                     PDIRRGVTDAQVVSRRDTFAGHITLLFGHYNGVGIYLIDAPHLYDRPGSPYHDTNLFA
                     YTDNVLRFALLGWVGAEMASGLDPFWRPDVVHAHDWHAGLAPAYLAARGRPAKSVFTV
                     HNLAYQGMFYAHHMNDIQLPWSFFNIHGLEFNGQISFLKAGLYYADHITAVSPTYARE
                     ITEPQFAYGMEGLLQQRHREGRLSGVLNGVDEKIWSPETDLLLASRYTRDTLEDKAEN
                     KRQLQIAMGLKVDDKVPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALLGAGDPVL
                     QEGFLAAAAEYPGQVGVQIGYHEAFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGTL
                     PLVRRTGGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRRAFVLWSRASLWRF
                     VQRQAMAMDFSWQVAAKSYRELYYRLK"
     gene            complement(3930..5225)
                     /gene="glgC"
                     /locus_tag="JN001_002274"
     CDS             complement(3930..5225)
                     /gene="glgC"
                     /locus_tag="JN001_002274"
                     /EC_number="2.7.7.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphate adenylyltransferase"
                     /protein_id="HAY9053490.1"
                     /translation="MVSLEKNDHLMLARQLPLKSVALILAGGRGTRLKDLTNKRAKPA
                     VHFGGKFRIIDFALSNCINSGIRRMGVITQYQSHTLVQHIQRGWSFFNEEMNEFVDLL
                     PAQQRMKGENWYRGTADAVTQNLDIIRRYKAEYVVILAGDHIYKQDYSRMLIDHVEKG
                     ARCTVACMPVPIEEASAFGVMAVDENDKIIEFVEKPANPPSMPNDPSKSLASMGIYVF
                     DADYLYELLEEDDRDENSSHDFGKDLIPKITEAGLAYAHPFPLSCVQSDPDAEPYWRD
                     VGTLKAYWKANLDLASVVPELDMYDRNWPIRTYNESLPPAKFVQDRSGSHGMTLNSLV
                     SGGCVISGSVVVQSVLFSRVRVNSFCNIDSAVLLPEVWVGRSCRLRRCVIDRACVIPE
                     GMVIGENAEEDARRFYRSEEGIVLVTREMLRKLGHKQER"
     gene            complement(5243..7216)
                     /gene="glgX"
                     /locus_tag="JN001_002275"
     CDS             complement(5243..7216)
                     /gene="glgX"
                     /locus_tag="JN001_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HAY9053491.1"
                     /translation="MTQLAIGKPAPLGAHYDGQGVNFTLFSAHAERVELCVFDANGQE
                     HRYDLPGHSGDIWHGYLPDARPGLRYGYRVHGPWQPAEGHRFNPAKLLIDPCARQIDG
                     EFKDNPLLHAGHNEPDYRDNAAIAPKCVVVVDHYDWEDDAPPRTPWDSTIIYEAHVKG
                     LTYLHPEIPVEIRGTYKALGHPVMINYLKQLGITALELLPVAQFASEPRLQRMGLSNY
                     WGYNPVAMFALHPAYACSPETALDEFRDAIKALHKAGIEVILDIVLNHSAELDLDGPL
                     FSLRGIDNRSYYWIREDGDYHNWTGCGNTLNLSHPAVVDYASACLRYWVETCHVDGFR
                     FDLAAVMGRTPEFRQDAPLFTAIQNCPVLSQVKLIAEPWDIAPGGYQVGNFPPLFAEW
                     NDHFRDAARRFWLHYDLPLGAFAGRFAASSDVFKRNGRLPSAAINLVTAHDGFTLRDC
                     VCFNHKHNEANGEENRDGTNNNYSNNHGKEGLGGSLDLVERRRDSIHALLTTLLLSQG
                     TPMLLAGDEHGHSQHGNNNAYCQDNQLTWLDWSQASSGLTAFTAALIHLRKRIPALVE
                     NRWWEEGDGNVRWLNRYAQPLSTDEWQNGPKQLQILLSDRFLIAINATLEVTEIVLPA
                     GEWHAIPPFAGEDNPVITAVWQGPAHGLCVFQR"
     gene            complement(7213..9399)
                     /gene="glgB"
                     /locus_tag="JN001_002276"
     CDS             complement(7213..9399)
                     /gene="glgB"
                     /locus_tag="JN001_002276"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching enzyme"
                     /protein_id="HAY9053492.1"
                     /translation="MSDRIDRDVINALIAGHFADPFSVLGMHKTTAGLEVRALLPDAT
                     DVWVIEPKTGRKLAKLECLDSRGFFSGVIPRRKNFFRYQLAVVWHGQQNLIDDPYRFG
                     PLIQEMDAWLLSEGTHLRPYETLGAHADTMDGVTGTRFSVWAPNARRVSVVGQFNYWD
                     GRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPETAS
                     LICGLPEKVVQTEERKKANQFDASISIYEVHLGSWRRHTDNNFWLSYRELADQLVPYA
                     KWMGFTHLELLPINEHPFDGSWGYQPTGLYAPTRRFGTRDDFRYFIDAAHAAGLNVIL
                     DWVPGHFPTDDFALAEFDGTNLYEHSDPREGYHQDWNTLIYNYGRREVSNFLVGNALY
                     WIERFGIDALRVDAVASMIYRDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQV
                     SGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLT
                     FGILYNYTENFVLPLSHDEVVHGKKSILDRMPGDAWQKFANLRAYYGWMWAFPGKKLL
                     FMGNEFAQGREWNHDASLDWHLLEGGDNWHHGVQRLVRDLNLTYRHHKAMHELDFDPY
                     GFEWLVVDDKERSVLIFVRRDKEGNEIIVASNFTPVPRHDYRFGINQPGKWREILNTD
                     SMHYHGSNAGNGGTVHSDEIASHGRQHSLSLTLPPLATIWLVREAE"
     gene            complement(9672..10775)
                     /gene="asd"
                     /locus_tag="JN001_002277"
     CDS             complement(9672..10775)
                     /gene="asd"
                     /locus_tag="JN001_002277"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HAY9053493.1"
                     /translation="MKNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAA
                     PSFGGTTGTLQDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLR
                     MKDDAIIILDPVNQDVITDGLNNGIRTFVGGNCTVSLMLMSLGGLFANDLVDWVSVAT
                     YQAASGGGARHMRELLTQMGHLYGHVVDELATPSSAILDIERKVTTLTRSGELPVDNF
                     GVPLAGSLIPWIDKQLDNGQSREEWKGQAETNKILNTSSVIPVDGLCVRVGALRCHSQ
                     AFTIKLKKDVSIPTVEELLAAHNPWAKVVPNDREITMRELTPAAVTGTLTTPVGRLRK
                     LNMGPEFLSAFTVGDQLLWGAAEPLRRMLRQLA"
     gene            10967..11560
                     /gene="yhgN"
                     /locus_tag="JN001_002278"
     CDS             10967..11560
                     /gene="yhgN"
                     /locus_tag="JN001_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YhgN"
                     /protein_id="HAY9053494.1"
                     /translation="MNEIISAAVLLILIMDPLGNLPIFMSVLKHTEPKRRRAIMVREL
                     LIALLVMLVFLFAGEKILAFLSLRAETVSISGGIILFLIAIKMIFPSASGNSSGLPAG
                     EEPFIVPLAIPLVAGPTILATLMLLSHQYPNQMGHLVIALLLAWGGTFVILLQSSLFL
                     RLLGEKGVNALERLMGLILVMMATQMFLDGIRMWMKG"
     gene            complement(11617..12957)
                     /gene="gntU"
                     /locus_tag="JN001_002279"
     CDS             complement(11617..12957)
                     /gene="gntU"
                     /locus_tag="JN001_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate transporter"
                     /protein_id="HAY9053495.1"
                     /translation="MTTLTLVLTAVGSVLLLLFLVMKARMHAFLALMVVSMGAGLFSG
                     MPLDKIAATMEKGMGGPLGFLAVVVALGAMFGKILHETGAVDQIAVKMLKSFGHSRAH
                     YAIGLAGLVCALPLFFEVAIVLLISVAFSMARHTGTNLVKLVIPLFAGVAAAAAFLVP
                     GPAPMLLASQMNADFGWMILIGLCAAIPGMIIAGPLWGNFISRYVELHIPDDISEPHL
                     GEGKMPSFGFSLSLILLPLVLVGLKTIAARFVPEGSTAYEWFEFIGHPFTAILVACLV
                     AIYGLAMRQGMPKDKVMEICGHALQPAGIILLVIGAGGVFKQVLVDSGVGPALGEALT
                     GMGLPIAITCFVLAAAVRIIQGSATVACLTAVGLVMPVIEQLNYSGAQMAALSICIAG
                     GSIVVSHVNDAGFWLFGKFTGATEAETLKTWTMMETILGTVGAIVGMIAFQLLS"
     gene            complement(12961..13488)
                     /gene="gntK"
                     /locus_tag="JN001_002280"
     CDS             complement(12961..13488)
                     /gene="gntK"
                     /locus_tag="JN001_002280"
                     /EC_number="2.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417894.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HAY9053496.1"
                     /translation="MSTTNHDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHP
                     RRNIEKMASGEPLNDDDRKPWLQALNDAAFAMLRTNKVSLIVCSALKKHYRDLLREGN
                     PNLSFIYLKGDFDVIESRLKARKGHFFKTQMLVTQFETLQEPGADETDVLVVDIDQPL
                     EGVVASTIEVIKKGK"
     gene            complement(13627..14622)
                     /gene="gntR"
                     /locus_tag="JN001_002281"
     CDS             complement(13627..14622)
                     /gene="gntR"
                     /locus_tag="JN001_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001693277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconate operon transcriptional repressor GntR"
                     /protein_id="HAY9053497.1"
                     /translation="MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAAL
                     DELGYIPNRAPDILSNATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYG
                     YKPEMEQERLESMLSWNIDGLILTERTHTPRTLKMIEVAGIPVVELMDSQSPCLDIAV
                     GFDNFEAARQMTTAIIARGHCHIAYLGARLDERTIIKQKGYEQAMLDAGLVSYSVMVE
                     QSSSYSSGIELIRQARREYPQLDGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHG
                     HDIGQVMEPRLASVLTPRERMGSIGAERLLARIRGESVTPKMLDLGFTLSPGGSI"
     gene            complement(14846..15541)
                     /locus_tag="JN001_002282"
     CDS             complement(14846..15541)
                     /locus_tag="JN001_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HAY9053498.1"
                     /translation="MIYLRKANERGHANHGWLDSWHTFSFANYYDPNFMGFSALRVIN
                     DDVIEAGQGFGTHPHKDMEILTYVLEGTVEHQDSMGNKEQVPAGEFQIMSAGTGIRHS
                     EYNPSSTERLHLYQIWIMPEENGITPRYEQRRFDAVQGKQLVLSPDARDGSLKVHQDM
                     ELYRWALLKDEQSVHQIAAERRVWIQVVKGNVTINGVKASTSDGLAIWDEQAISIHAD
                     SDSEVLLFDLPPV"
     gene            complement(15664..16701)
                     /locus_tag="JN001_002283"
     CDS             complement(15664..16701)
                     /locus_tag="JN001_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709215.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY9053499.1"
                     /translation="MVINCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPEEQ
                     APIYSHIHFISDLDEVLNDPDVKLVVVCTHADSHFEYAKRALEAGKNVLVEKPFTPTL
                     AQAKELFALAKSKGLSVTPYQNRRFDSCFLTAKKAIESGKLGEIVEVESHFDYYRPVA
                     ETKPGLPQDGAFYGLGVHTMDQIISLFGRPDHVAYDIRSLRNKANPDDTFEAQLFYGD
                     LKAIVKTSHLVKIDYPKFIVHGKKGSFIKYGIDQQETSLKANIMPGEPGFAADDSVGV
                     PEYVNDEGVTVREEMKPEMGDYGRVYDALYQTITHGAPNYVKESEVLTNLEILERGFE
                     QASPSTVTLAN"
     gene            17033..17521
                     /gene="yhhY"
                     /locus_tag="JN001_002284"
     CDS             17033..17521
                     /gene="yhhY"
                     /locus_tag="JN001_002284"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY9053500.1"
                     /translation="MSEIVIRHAETRDYEAIRQIHAQPEVYCNTLQVPHPSDHMWQER
                     LADRPGIKQLVACIDGDVVGHLTIDVQQRPRRSHVADFGICVDSRWKNRGVASALMRE
                     MIEMCDNWLRVDRIELTVFVDNAPAIKVYKKYGFEIEGTGKKYALRNGEYVDAYYMAR
                     VK"
     gene            17758..18957
                     /gene="hcp"
                     /locus_tag="JN001_002285"
     CDS             17758..18957
                     /gene="hcp"
                     /locus_tag="JN001_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000065895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VI secretion system tube protein Hcp"
                     /protein_id="HAY9053501.1"
                     /translation="MSNIVYLTVTGEQQGSISAGCGTSESTGNRWQSGHEDEIFTFSL
                     LNNINNTGLGSQFHGITFCKLIDKSTPLFINSINNNEQLFMGFDFYRINRFGRLEKYY
                     YIQLRGAFLSAIHHQIIENQLDTETITISYEFILCQHLIANTEFSYLALPENYNRLFL
                     PNSKNQTNNRFKTLNSKAIGRLLAAGGVYNGNIEGFRDTAEKLGGDAIKGYDQILNEK
                     TAGIAIATASILLTKRSNVDTYTEINSYLGKLRGQQKLLDGIDIIEIIYIKRPSKDLA
                     NLRKEFNKTVRKNFLIKLAKTSEASGRFNAEDLLRMRKGNVPLNYNVHHKLSLDDGGT
                     NDFENLVLIENEPYHKVFTNMQSRIAKGILVGESKITPWAIPSGSIYPPMKNVMNASH
                     TIKHGAV"
BASE COUNT         4900 a         5063 c         4654 g         4512 t
ORIGIN      
        1 cctttggccc cgttctattt attggtgaac ttacaatctc accggatcga tatgccagat
       61 atgatcggcg tactctttga tagtacggtc agaagagaag tagcccatat tggcaatgtt
      121 cagcatcgct tttgcggtcc actcttcctg aagctcgtag agttcgtcga ctttatcctg
      181 acaatcgaca tagctgcgat aatccgccag aacctgatag tgatcgccga agttgatcag
      241 cgaatcaacc agatcgcgat agcgacccgg atcttccgga ctgaatacac cgctgccgat
      301 ttgcgtcagc acctgatgca gctcctcatc tttctcgtag tattcacgcg gtttgtagcc
      361 ctgacgacgc agttcttcca cttcttccgc tgtgttacca aaaataaaga tattgtcagc
      421 accgacatga tccagcatct cgacattcgc accgtccaac gtaccgatag tcagcgcacc
      481 gttaagcgca aacttcatgt tactggtgcc ggaagcttcc gtccctgcca gcgaaatctg
      541 ttcagacaga tctgccgccg gaatgatcaa ctgcgccagg ctaacgctgt agttcgggat
      601 gaacacgact ttcagcttat cgccaatctg cggatcgttg ttgatcactt tcgctacgtc
      661 attgatcaaa tgaataatgt gcttcgccat gtaataggcc gaagccgcct taccgccaaa
      721 aatattcacg cgcggtaccc acttcgcatc cgggtcggcc ttgatgcggt tatagcgggt
      781 aatcacatgc aacacattca tcaattgacg tttgtattcg tgaatacgtt tgatttgtac
      841 atcgaacaac gcctttggat tcaccaccac attcagctgc tgggcgatat actctgccag
      901 acgctttttg ttctccagct tcgcctgatg cacagcgtga ttaaccattg ggaaatcaca
      961 gtgttgttgc agctcattaa gcaggctaag gtcggtgcgc cagttacggc ccaggtgttc
     1021 gtccagcacg gctgaaagcg atgggttcgc taccgctagc cagcgacgcg gcgtcacacc
     1081 gttggtgacg ttggtgaaac gacccgggaa gattttcgca aagtcggcaa acaacgattg
     1141 caccatcaga ttagagtgca gttccgatac accgttaact ttgtggctca caacaaccgc
     1201 cagccaggcc atacgcacac gacgaccgtt ggattcatca atgatcgacg cccgtcccag
     1261 cagatcggta tcgttcggat actgttcctg caaggttttc aggaaatagt cgttgatttc
     1321 aaagatgatc tgcaggtgac gcggcagaat tttacccagc atatcaaccg gccaggtttc
     1381 cagcgcctcg ctcatcagcg tgtggttagt gtaggagaag acctgacaac acacctcaaa
     1441 cgcgtcgtcc cagctaaatt ggtgctcatc gatcagcaga cgcatcatct caggaatcga
     1501 cagtaccgga tgggtatcat tgagatgaat cgcgatttta tccgccaggt tatcgtaggt
     1561 tttatgcaac tgataatggc ggcttaaaat gtcctgaatg gtcgaggaaa ccagaaagta
     1621 ttcctgacgc aggcgcagct cacgcccgga gtaggtggag tcatccggat acagtacgcg
     1681 agatacgttc tcggagtggt ttttatcttc cactgccgcg aagtagtcac cttggttgaa
     1741 tttaccgagg ttaatttcgc tactggcttg cgcactccac aaacgcaacg tgttggtcgc
     1801 gtcggtgtcg taaccaggga ttatctgatc gtaagcgact cccagaatct cttcggtttc
     1861 aatccagcgc gtttttttac cttcctgctg aatgcgacca ccaaaacgga ctttatagcg
     1921 cgtgttgtgg cgtttgaatt cccacgggtt accgtattcc agccagtagt ctggcgactc
     1981 tttctggcta ccgttaacga tgttctgctt gaacataccg tagtcatagc ggatgccgta
     2041 accgcgcccc ggcaacccta acgtcgccag agaatcaagg aagcaagccg ccagacgtcc
     2101 caggccaccg ttaccgaggc ctgggtcatt ttcttcatca atcagctctt cgagatttaa
     2161 ccccatcgct tccagtgcgc cctgtacatc ttcgtaaatt cctagcgaca acatggcgtt
     2221 ggagagcgta cggccaatca aaaactccat cgacaggtag taaacctgac gagtttcttg
     2281 cgacaactgg gcacggtttg aacgtaacca gcgctccacg agacgatcgc gcacagcaaa
     2341 taacgttgcg ttcagccatt catgtttatt ggcgacgacc gggtcctttc caatcgtaaa
     2401 catcagcttg taagcgatag agtgcttaag agcttctacg ctaagcgtgg gcgatgaata
     2461 tgtaaacgga gcattcatat aggcgtttcc tgaaaactat ttcaagcgat agtaaagctc
     2521 acggtacgac ttcgccgcga cctgccagct aaaatccatt gccatagcct gacgttgcac
     2581 aaaccgccac agtgaagcac gagaccacag tacaaaagca cgtcgaatag cccgtaacag
     2641 cgaccaggca ttactatctt caaagacaaa cccactggcg acgccatctg caaggttctc
     2701 aagagaacag tcagaaaccg tatcagcaag cccaccggtg cgccgcacta acggcagcgt
     2761 accgtacttc aatccataaa gttgcgttaa gccgcacggt tcaaaacggc tgggcaccag
     2821 aatgacgtcc gcgccgccca taatgcgatg cgaaaatgct tcgtgatagc caatctgaac
     2881 gcccacctgg ccggggtatt ccgctgccgc cgcaaggaaa ccttcctgca gcaccggatc
     2941 gcccgcgccg agtagcgcca gctgcccgcc ctgctccaga agacccggta aggcttccag
     3001 caccaggtcg agacctttct ggctggtcag acggctcacc actgcaaaaa gcggcacttt
     3061 atcgtcaacc ttaagcccca ttgcgatttg taactggcgc ttattttccg ctttatcttc
     3121 caacgtatcg cgggtgtaac gcgaggccaa cagtaagtcc gtctctggac tccagatttt
     3181 ctcgtccacg ccgttcagta cgccggaaag acgcccttca cggtgacgct gttgcaacag
     3241 accttccata ccgtaggcaa actgcggttc ggtgatctcg cgagcgtagg ttggactgac
     3301 cgccgtaatg tgatcggcat agtacagacc ggccttcagg aaagagattt gtccgttgaa
     3361 ttccagccca tgaatattaa agaatgacca tggcaattgg atgtcattca tgtgatgtgc
     3421 ataaaacatg ccttgatagg ccaagttgtg cacagtaaac accgacttcg ccggacgccc
     3481 gcgcgccgcc agatacgcag gcgcaaggcc tgcatgccag tcgtgcgcat gcaccacatc
     3541 aggacgccag aatgggtcaa gcccgctggc catttctgcc ccaacccacc ccagcagcgc
     3601 aaaacgcaat acgttgtcgg tataggcaaa taagttggta tcgtgatacg ggcttcccgg
     3661 acgatcatag agatgcggcg cgtcaatcag gtatatgcca accccgttgt aatgaccgaa
     3721 caacagcgtg atatgtccgg cgaaggtatc acgacgggat actacctgcg catcggtcac
     3781 gccacggcga atatcgggaa atgcaggcaa cagtacgcga gcgtcaacgc cgtctgcgat
     3841 ttgtgctgcg ggtaatgccc caataacatc agccagaccg ccggttttaa gcagcgggaa
     3901 catctctgaa catacatgta aaacttgcat tatcgctcct gtttatgccc taacttccgt
     3961 agcatttcgc gcgttaccag cacgatgcct tcttctgaac gatagaaacg acgtgcatct
     4021 tcctctgcgt tttcaccaat caccatgcct tccgggataa cacaagcacg atcgatgacg
     4081 cagcggcgca gacggcacga gcgacctacc catacttccg gtaacaatac ggcggaatca
     4141 atgttgcaga atgaattcac gcgaacgcgc gagaacagaa cggactgcac caccaccgaa
     4201 ccggagatca cacaaccgcc ggataccagt gagttaaggg tcatcccgtg gctaccggag
     4261 cgatcctgca cgaatttcgc tggcggtaat gattcattgt aggtgcgaat tggccaattg
     4321 cgatcgtaca tatccagttc cggcaccaca gaggccagat cgagattcgc tttccagtaa
     4381 gctttcagcg tacccacatc gcgccagtac ggctcggcat ccgggtcgga ttgtacgcaa
     4441 gagagcggga acgggtgcgc ataggccaga ccggcttcgg tgatcttggg aatcaaatct
     4501 ttgccaaagt cgtggctgga gttctcatca cgatcgtctt cttccagcag ttcatacaga
     4561 tagtcggcgt caaagacgta gatacccata ctcgccagag atttgctcgg atcgttcggc
     4621 attgacggtg ggttagcagg tttttcaacg aattcgataa ttttatcgtt ctcatcaacc
     4681 gccataacgc caaatgcgga ggcttcttca atcggtactg gcatacaagc aacggtgcaa
     4741 cgtgcgcctt tttcgacgtg atcgataagc atacgcgagt agtcttgctt gtagatatgg
     4801 tcgcccgcca ggatcaccac gtattccgct ttataacggc ggataatgtc gaggttttgg
     4861 gtgaccgcat ctgcggtgcc gcgataccag ttttcccctt tcattctctg ctgtgctggc
     4921 agcagatcga caaactcgtt catttcttca ttgaagaatg accagccgcg ctgaatgtgc
     4981 tgcaccagag tgtgggactg gtactgggtg atcacgccca tacgacggat cccggagttg
     5041 atgcagttag acagcgcaaa gtcgataatg cggaacttac cgccgaagtg tacggccggt
     5101 tttgctcgct tattggttaa atccttcagg cgggtaccac gtcctcccgc cagtatcagg
     5161 gcaacagatt tcaatggcag ctggcgcgcc aacattaagt gatcgttctt ctctaaacta
     5221 accatgacta actccttttt tatcatctct ggaacacaca caatccgtgt gcaggtccct
     5281 gccagacagc cgtaatcact gggttatcct ctccagcgaa tgggggaatg gcgtgccact
     5341 ccccagcagg taaaacaatc tctgttacct caagcgtggc gttaattgcg atcaaaaagc
     5401 gatccgagag cagaatttgc agctgtttcg gcccgttttg ccactcatcc gtgcttaaag
     5461 gttgagcata tcgatttagc caacggacat tgccatcgcc ttcttcccac cagcgattct
     5521 ccaccaaagc gggaatgcgc ttgcgcagat ggattaacgc ggcggtaaat gcggttaaac
     5581 cactgcttgc ctgcgaccag tccaaccagg ttaattggtt atcctgacag taggcattgt
     5641 tattgccatg ctggctgtga ccatgttcgt caccggccag taacatcggc gtaccctggg
     5701 agagcaacaa cgttgttaac aaggcgtgaa tactgtcgcg ccgccgttca accaggtcaa
     5761 gagaaccgcc taacccttct ttaccatgat tgttactgta attgttgttg gtcccgtcgc
     5821 gattttcttc tccgtttgct tcattgtgtt tatggttgaa gcaaacgcag tcgcgaagcg
     5881 taaaaccgtc atgcgcagtg acgagattaa tcgcggcact cggcagacga ccattacgtt
     5941 taaaaacatc gctggaggca gcaaaacgcc cggcaaacgc ccccagaggc aaatcataat
     6001 gtagccagaa acgacgggca gcatcgcgga aatgatcgtt ccactcggca aacagcggcg
     6061 ggaaatttcc cacctgataa ccaccagggg cgatatccca cggttcagca attaacttca
     6121 cctgcgagag caccgggcag ttctggatag cggtaaacaa cggcgcatcc tgacggaact
     6181 ctggcgtacg gcccatgact gccgccagat caaagcggaa accatcgacg tgacaggttt
     6241 ctacccaata acgcaggcag gcgctggcat aatccaccac cgccggatga ctcaaattga
     6301 gcgtgttgcc gcaaccggtc cagttgtgat aatcgccgtc ttctcttatc caataatagc
     6361 tacggttatc gatcccacgc agtgagaata acgggccgtc gaggtccagt tccgcactat
     6421 ggttgagcac gatatcaaga atgacttcga tacccgcttt atgcagtgct ttgattgcat
     6481 cgcgaaactc atccagcgcc gtttctggcg agcaggcata cgccggatgc agcgcaaaca
     6541 tcgccaccgg gttgtaaccc cagtagttac ttagccccat gcgttgcaga cgtggttcac
     6601 tggcaaactg cgccactggc agcagttcca gcgcggtaat gcccaattgt ttcaaatagt
     6661 tgatcatcac cggatgcccg agggctttat aagtgccacg gatctcgacc ggaatctccg
     6721 ggtgcaagta cgttaatcct ttgacatggg cttcataaat gatggtgctg tcccacggcg
     6781 tgcgcggcgg ggcatcatct tcccagtcat agtgatcaac caccactacg catttcggcg
     6841 caatggcggc gttgtcgcga tagtcaggtt cattatgacc ggcgtgcagc agcgggttat
     6901 ctttaaattc cccgtcaatt tgccgcgcgc aaggatcaat caacaacttc gccgggttaa
     6961 agcgatgccc ctcggcgggt tgccaggggc catgaacgcg ataaccataa cgcaaacccg
     7021 ggcgcgcatc cggcagataa ccgtgccaaa tgtcgccact gtgccctggc aagtcatagc
     7081 gatgttcctg gccattggcg tcaaagacac acagttctac ccgctcggca tgagcggaga
     7141 aaagtgtgaa gttgacgccc tgaccgtcgt aatgcgcgcc gaggggagcg ggtttgccaa
     7201 tggcgagttg tgtcattctg cctcccgaac cagccagata gtggccagcg gtggtagtgt
     7261 caggcttagt gaatgctgac gaccgtggct ggcaatctca tcgctgtgta ccgtgccgcc
     7321 attgcctgca ttactgccgt gatagtgcat ggaatcggta ttgaggattt cacgccattt
     7381 gcctggctga ttaatgccga agcgataatc atgacgcggc accggcgtaa agttactggc
     7441 aacgataatt tcgttaccct ctttatcgcg acgcacaaag atcagcaccg agcgttcttt
     7501 gtcatccacc accagccatt caaagccgta cgggtcaaaa tccagttcat gcattgcttt
     7561 atggtggcgg taggtgaggt tcagatcgcg caccagacgc tggacaccgt ggtgccagtt
     7621 atcgccacct tccaacagat gccagtcgag gctggcgtca tggttccact cacggccctg
     7681 ggcaaattcg ttccccatga acagcagttt cttgcccggg aatgcccaca tccagccata
     7741 gtaggcgcgc aggttagcga atttctgcca tgcgtcgccc ggcatgcggt cgagaatcga
     7801 ttttttaccg tggaccactt catcatgcga caacggcagg acgaagtttt cagtgtagtt
     7861 gtagagaatc ccgaaggtga gtttatcgtg atgatactga cgataaaccg ggtcgagctt
     7921 catgtagtcc agggtgtcat gcatccagcc gaggttccac ttgtaccaga agcccagacc
     7981 gcccatatcc tgcggacgag aaacgccagg gaaatcggta gactcctcag ccattgtcac
     8041 cgcaccggaa acctgctcac caagaatacg gttggtatta cgcaagaatt caatcgcttc
     8101 aagattctcg cgcccgccaa attcgttcgg gatccactcc ccctctttac ggctgtagtc
     8161 gcgataaatc attgacgcca ccgcatcgac gcgcagcgca tcaataccaa aacgttcaat
     8221 ccagtaaagc gcgttaccga cgaggaagtt actgacttca cggcgaccat aattgtagat
     8281 cagcgtattc cagtcctgat gatagccttc gcgcggatcg ctgtgttcat acaagttcgt
     8341 gccatcaaat tcggcaagcg caaagtcatc ggtcgggaag tggcctggca cccagtcgag
     8401 aatcacgttc agacccgctg cgtgtgcggc atcaatgaaa taacggaagt cgtcgcgagt
     8461 accaaaacgg cgggttggtg catacaggcc ggttggctga taaccccaac tgccatcgaa
     8521 gggatgctcg ttaatgggca gtagttcgag gtgggtaaag cccatccatt tagcataagg
     8581 caccagttga tcggccagct cgcggtagct caaccagaaa ttgttatcgg tgtggcgacg
     8641 ccaggagccc aggtgaactt cataaataga gattgacgca tcaaactgat tcgctttttt
     8701 gcgctcttca gtctgtacaa ccttttccgg cagcccgcaa ataagagacg cggtttccgg
     8761 gcgcatttgc gcttcgaagg cataagggtc ggacttcaga cgcaagttgc cattggcatc
     8821 aatcatctcg tatttataga gctgaccgtt atgcgcccca gggataaaca gttcccaaat
     8881 gccgctctct ttacgcagac gcatcgggtg acggcgaccg tcccagtagt tgaattgccc
     8941 aaccaccgag acccgacggg cgtttggagc ccaaacagag aaacgcgtac ctgtgacgcc
     9001 atccatagta tctgcatgcg cgcctaaggt ttcatacggg cgcaggtgag taccttcaga
     9061 taatagccag gcatccattt cctggattag cgggccaaaa cggtaaggat catcaatcag
     9121 gttttgctga ccatgccaga caacagccaa ctgatagcgg aaaaaattct tacgtcgcgg
     9181 aatgacaccg ctaaagaatc cccgtgagtc aagacactcc agttttgcga gtttgcgccc
     9241 ggttttcggt tcaatcaccc acacatcggt agcgtcgggt aaaagggcac ggacttccag
     9301 tcccgcggtg gttttatgca ttcccagtac ggaaaaagga tccgcaaaat ggcctgcaat
     9361 tagcgcgtta atcacgtctc tatcgatacg atcggacatg cttgtcttcc tgttttattg
     9421 tgtcacccca tccaattgga tttttgactt ctggttgtga catttttttg acctgaacgg
     9481 cgcagcactc tgtgcatcct ctctgcgtcg tcctcacttc aggtaaggct gtgaatactc
     9541 atgtattcag ccacccttaa agaatagcca atgctctatt taactcccgg taaatcatga
     9601 aacatctgcg cttactcctg tattacgcac taacaggggc ggcatcgcgc cccagattta
     9661 atgaataaag attacgccag ttgacgaagc atccgacgca gcggctccgc ggccccccac
     9721 agcagctggt cacccacggt aaaggctgac aggaactccg gtcccatatt cagcttacgc
     9781 aggcggccta ccggcgtggt cagcgtgccg gtaacggcag ctggggttag ctcacgcata
     9841 gtgatttccc gatcgttcgg aacgactttc gcccacggat tgtgcgcagc cagcagttct
     9901 tcgacggtcg gaatagacac atcttttttc aatttaatag tgaatgcctg gctgtggcag
     9961 cgcaatgccc cgacacgcac acataaacca tctaccggaa ttacggaaga tgtgttgagg
    10021 atcttgttgg tttccgcctg ccctttccac tcttcgcggc tctgaccgtt atcgagctgt
    10081 ttgtcgatcc acggaatcag gctacccgcc agcggcacgc caaagttatc caccggcagc
    10141 tcaccgctac gggttaaggt tgtgactttg cgttcgatat cgagaatagc agaggacggg
    10201 gtcgcgagtt catctaccac atggccatac agatggccca tctgggttaa taactcacgc
    10261 atatgtcgcg caccaccgcc ggaagcggcc tggtaggttg caacggacac ccaatcaaca
    10321 agatcattgg cgaataaacc acccaacgac atcaacatca ggcttacggt acagttaccg
    10381 ccaacaaaag tcctgatgcc attatttaat ccgtcggtaa tgacgtcctg attgacgggg
    10441 tcaagaatga tgatggcgtc atctttcatg cgcagagacg atgctgcgtc aatccagtaa
    10501 ccttgccatc cgctttcacg aagctttgga tagatttcgt tggtataatc gccgccctga
    10561 caggtcacaa tgatatcgag ggcctttagc gcctccagat caaaggcatc ctgaagtgtg
    10621 ccagtggttc cgccaaaaga cggcgcagcc tggccaagct gagaagtaga aaagaagaca
    10681 gggcgaatgg cgtcgaagtc gcgctcttca accatgcgtt gcatgagaac ggagccgacc
    10741 ataccgcgcc agccgataaa accaacattt ttcataagcg ttttttcctg caaagatgtg
    10801 tgctgtataa atgtgccggt ctcctcttgg cacatctttc accatacaaa aagcagccaa
    10861 agtcgcaagt gaaattaatc aatgatagcg aagccatcag taatgcgact tatcctgctt
    10921 tgttagcaca cagaaagtcc gcggcaatta tcagggaatt tgagttatga atgaaatcat
    10981 ttctgcagca gttttattga tcctgattat ggatccgctc ggaaacctgc ctattttcat
    11041 gtccgtactg aaacatactg aaccgaaaag acggcgggca atcatggtgc gagagttgct
    11101 tattgctctc ctggtgatgc tggtgttcct gtttgcgggt gagaaaattc tggcatttct
    11161 cagcctgcga gcagaaaccg tctccatttc tggcggcatc attctgtttc taatcgccat
    11221 taagatgatt ttccccagcg cttcaggaaa tagcagcggg cttccggcag gtgaagagcc
    11281 atttatcgtg ccgttggcaa ttccgttagt cgccgggccg actattctcg ccacgctgat
    11341 gttgttgtct catcagtacc cgaatcagat gggacatctg gtgattgctc tgctgctggc
    11401 ctggggcggc acctttgtca tcctgctaca gtcttcgcta tttttacgtc tgctgggcga
    11461 gaaaggggtg aacgcacttg aacgcctgat gggattgatt ctggtgatga tggcaaccca
    11521 gatgttcctc gacggcattc gaatgtggat gaaggggtaa cgaggagagt ttttcgaaaa
    11581 gaacccggta gcgtcacaac taccgggcga acaaacttaa ctcaacagct ggaacgcaat
    11641 catcccaacg atggcaccaa cagtgccgag gatggtttcc atcatggtcc aggttttcag
    11701 cgtttcggct tcggtcgcgc cggtaaattt accgaacaac cagaaaccgg cgtcgttaac
    11761 gtggctgaca acaatcgaac caccagcgat acaaatcgac agtgccgcca tttgcgcacc
    11821 ggagtagttc agttgttcaa tgaccggcat caccagcccc accgccgtta aacaggcaac
    11881 ggtggcagac ccctgaatga tgcgcactgc agcggccagc acgaagcagg tgatagcaat
    11941 cggcaggccc atgccggtta acgcttcgcc cagtgccgga cctacgccag agtcaaccag
    12001 cacctgtttg aacacgccgc ctgcaccaat caccagcaga atgatccccg ccggttgtag
    12061 cgcgtgaccg caaatctcca tcactttgtc ttttggcatg ccctgacgca ttgccaggcc
    12121 ataaatcgct accagacaag caaccagaat cgcggtaaat ggatgaccaa taaactcgaa
    12181 ccattcgtaa gcagttgatc cttctggcac aaaacgagcg gcaatggttt tcagccccac
    12241 cagcaccagc ggcaacagga tcagcgacag gctgaatccg aaggacggca ttttgccttc
    12301 gccgagatgc ggttcgctga tgtcgtcagg aatatgcaac tccacgtaac ggctgatgaa
    12361 attaccccac agcggcccgg caataatcat tcccggaatt gccgcacaca gaccaatcag
    12421 gatcatccag ccaaagtcgg cattcatctg cgatgccagc aacatcggcg ctggtccagg
    12481 caccagaaat gccgccgctg ccgccacgcc tgcgaataat gggattacca gcttcaccag
    12541 gttcgtaccg gtgtggcgcg ccattgagaa agcaacgcta atcagcagaa ctatcgccac
    12601 ttcaaagaac agcggtagcg cacagaccaa ccccgcaagg ccgatggcat aatgcgcgcg
    12661 gctgtgaccg aaggatttga gcattttgac ggcaatctga tcgactgcgc cggtttcatg
    12721 taagatcttg ccaaacatag ctcccagggc gacaaccacc gccaggaagc cgagggggcc
    12781 tcccatccct ttttccatcg tcgctgcgat tttatcgagc ggcataccgg aaaaaaggcc
    12841 agcccccatg gacaccacca tcaaagccag gaaagcgtgc atacgcgcct tcatgactaa
    12901 aaacagcagc agtaaaacag accctactgc tgttaaaaca agcgttaatg tagtcactac
    12961 ttatttgcct tttttaataa cctcaatggt gcttgccaca acaccttcca gcggttgatc
    13021 gatatccacc accagtacat cggtttcgtc cgcacccggc tcctgcagcg tttcaaactg
    13081 cgtcaccaac atttgggttt taaagaaatg gcctttgcgc gctttcaagc gactttcaat
    13141 cacatcaaaa tcgcctttca ggtagatgaa agagagattc ggattacctt cacgcagcaa
    13201 gtcgcgatag tgctttttca gtgcagaaca gacgatcagc gacactttat tggtgcgcag
    13261 catagcaaac gcggcgtcgt tcagcgcctg caaccagggt ttgcgatcgt cgtcattcag
    13321 cggttcgcca gacgccattt tttcgatatt gcgccgtgga tggaggaaat caccatcaag
    13381 aaacgcggca tgaagttgat gcgccacttc actggcgacc gcagatttgc cgctgcccga
    13441 tacgcccatc aagacgtaaa tgtggtgatc atggttagtc gtgctcaaag tggtgccccc
    13501 acaatacaag aattaaaaat gttacgggta actgttatcg gtaacattgt ccagccggac
    13561 aatatcagaa gcaatatcca tccgtgcctt aagtgtataa gtgtgagcta cttcaaattt
    13621 gtaggcttaa atagatccgc ccggtgacaa ggtgaaacct aaatctaaca ttttcggtgt
    13681 cacagattcg ccacgaatac gcgccagcag gcgttcagcg ccaatactgc ccatccgctc
    13741 acgcggcgtc agcacgctcg ctaaccgcgg ctccatcacc tggccaatgt catgaccgtg
    13801 gaaaccggca atcgccatat cgtcaggaac cttcaatccc agacgctgac attcaaacgc
    13861 cgcgccgacc gccaggtcat cgttggtaca gaacacgcca tccagctgcg gatattcccg
    13921 ccgcgcctgg cgaatcagtt caataccgga agagtaagaa gaagattgct caaccatcac
    13981 gctatacgac accagacctg catccagcat cgcctgttcg tatcccttct gtttgatgat
    14041 agtacgttcg tcgagacgcg cgccgagata ggcaatgtgg caatgcccgc gagcaataat
    14101 ggcggtggtc atctggcgtg ccgcttcaaa gttatcaaaa ccgacggcga tatcgaggca
    14161 cggcgactgg ctgtccatga gttccaccac cgggatcccc gccacttcaa tcatctttaa
    14221 ggtgcgcggc gtgtgggtac gttcggtgag gatcagtccg tcgatattcc atgagagcat
    14281 ggattcgaga cgttcttgct ccatttccgg tttataaccg tagtgagcca gcatggtctg
    14341 ataaccgtgc gcgtcggtga cgctttcgat tccgcgtaat acttccgcga aaacctggtt
    14401 ggtgagagaa ggtaacagga cgccaatcgc ccggctggtg gcgttagaga ggatatcggg
    14461 cgcacgattg ggaatatagc ccagttcatc aagagcggcg gcaatcttgc cgcgtagagc
    14521 gacggaaacc tgctccgggt tgcgtaaaaa acggctgacc gtcattttgg tcacgcctac
    14581 acggtcagcc acatcctgaa gtacgggtct tttctttttc atcgtcctga aggtacaaaa
    14641 gagatagatt ctcttagttt aacacggacg catcagaacc ttcccgggga aaacagtgct
    14701 tgtttacaat tattagatat acactaaatc aattgcatcg cattgtgcta acgacgcggc
    14761 aaaaccccgg aagcgtgcat cagcacgcga ccggagcgag cgaggaagcc tgcaaaaagg
    14821 caggcttcaa agatgccgtt gagttttaaa ccggcggcag atcgaacagt aacacttcgc
    14881 tgtcgctatc cgcatggatg gagattgcct gctcatccca gattgccaga ccatcgctgg
    14941 tcgaggcttt cacgccgtta atggtgacat tgcctttcac cacctggatc cagacgcggc
    15001 gttcagcggc aatctgatgc accgactgct catctttcag caacgcccag cggtacagtt
    15061 ccatatcctg atgcactttc aatgaaccat ctcgcgcatc cggcgagagc accagctgtt
    15121 tgccctgtac ggcatcgaag cgacgctgtt cataacgcgg cgtaataccg ttttcttcag
    15181 gcatgatcca gatctgatac agatgcagac gctcggtgct gcttgggttg tactctgagt
    15241 gacgaatacc cgtacccgca ctcataatct ggaactcacc cgccggaacc tgctctttat
    15301 tgcccatgct gtcctgatgc tcaacagtac cttccagcac gtaggtcaaa atttccatat
    15361 ctttatgcgg gtgagtgccg aagccctgcc ctgcttcaat cacgtcgtcg ttaatcacgc
    15421 gcagcgcgga gaagcccata aagttcggat cgtaatagtt ggcaaaagag aaagtatgcc
    15481 aggagtccag ccagccatga tttgcatgac cacgttcatt tgctttgcgt aagtagatca
    15541 tttgtattcg ccccctgaat gatttcgatg ggcttagtgt ggacccgatc tgcctgggat
    15601 gatagagggt gaaaattgcc ccctctgttc aaaaaaattg aactattcga ggggccatca
    15661 aacttaattc gcgagagtca ctgtggaggg agaggcttgc tcaaatccgc gttcaaggat
    15721 ttccagattg gtaagaactt cagattcctt gacgtaattt ggcgcaccgt gggtgatggt
    15781 ttgatacaac gcatcataaa cgcgcccgta atcgcccatc tccggcttca tctcttctct
    15841 gaccgtcacg ccctcgtcat tgacatactc cggcacaccg accgaatcat ccgctgcgaa
    15901 tcccggttcg cccggcataa tattagcctt caggctggtt tcctgctggt cgataccgta
    15961 tttaataaac gaacctttct taccgtgaac gataaatttc ggataatcga ttttcaccag
    16021 atggctggtt ttgacgatgg ctttcaggtc gccataaaac agttgcgctt caaaggtgtc
    16081 gtcaggattg gctttattac gcaggctgcg gatgtcataa gcgacgtgat ccgggcgacc
    16141 gaacagagaa ataatctggt ccatcgtatg cacaccaagg ccataaaacg cgccatcctg
    16201 cggcagccca ggtttggttt ctgccaccgg gcggtaatag tcaaaatggc tttccacttc
    16261 aacaatctct cccaacttgc cactttcaat cgcttttttc gctgtcagga agcaggagtc
    16321 aaagcgacga ttctgatacg gcgtgacgct cagccctttg cttttcgcca acgcaaacag
    16381 ctccttcgcc tgggcaagcg tcggggtgaa cggtttttcg accagcacat ttttcccggc
    16441 ttccagcgcg cgtttcgcgt actcgaaatg gctgtccgcg tgggtgcaga caacaaccag
    16501 cttaacatcg ggatcgttta gtacttcgtc gagatcgctg atgaaatgga tatgggaata
    16561 aatgggagcc tgttcttccg gcttcgcatg gcgacgaaaa atatgcgcga catgccagct
    16621 atccttgcgg ttaagtacat acggcagatg gtaacgggtg gtgcttttgc cgaagccaat
    16681 aaaggcgcag ttgatgacca tgatttcgtc ctttttaagg tggttattta caccttagcg
    16741 caaagcggac gtggttccta ctggagtgcg cataacgaac acaagcactc ccgtggataa
    16801 attgagaacg aaagatcaaa aaaaagccag cacccggctg gctaagtaat actggaagca
    16861 atgtgagcaa tgtcgtgctt tcaggttctc cgcgagggtc ttcctgatcg cgagacaata
    16921 ataatcattc tcattcgcac ttgtccaaca ctttttgcaa aaaaatgcat ttgactcgca
    16981 tttgaaagtc aatgatgttg aaagggacat ttaccccaaa gaggacaaag gaatgagtga
    17041 gatagtaata cgccacgcag aaacacggga ttacgaggcc atcaggcaga ttcacgccca
    17101 gccggaggtg tattgcaaca cactacaggt gcctcatcct tccgatcata tgtggcagga
    17161 gcgactcgcc gatcgtcccg gcatcaagca actcgtcgcc tgtattgatg gagacgtcgt
    17221 gggccatctc accattgacg tgcaacagcg cccacgccgc agtcatgttg ccgattttgg
    17281 tatctgtgtc gactctcgtt ggaagaaccg cggcgtcgcc agcgccctga tgcgagagat
    17341 gattgaaatg tgcgacaact ggttgcgggt agatcgcatt gaactaaccg tgtttgtcga
    17401 taacgccccg gcaattaagg tctataaaaa atacggcttt gaaattgaag ggactggtaa
    17461 gaagtacgca ttgcgtaatg gtgaatatgt cgatgcatat tatatggcgc gggtgaagta
    17521 agatagtgcc ctttttctga gatggaaaaa gggtgtcatt caaaatcgac ataccttcct
    17581 ttaaggtatt tatttaccca atacatatat tgagatttaa ctcataatta cttcctaaag
    17641 tgtaatattt tattttttaa tatatacgcc tacaatttcc tggagtaaat aaataacaat
    17701 taacaagcat aatattgcca ttgataaaat agcatgccat aaaaggactt ttcagggatg
    17761 agtaatattg tttacctgac agtaacggga gaacaacaag gaagcatctc cgcaggttgt
    17821 gggacttctg agtctacagg taatcgttgg cagagcgggc atgaggatga aatatttaca
    17881 ttctcactct taaataatat taataatacg gggcttggtt cacagttcca tggtataaca
    17941 ttttgtaaat taattgataa aagcactcca ttatttatta attccattaa caataatgaa
    18001 caattattta tgggatttga cttctatcga ataaatagat ttggtagatt ggaaaagtat
    18061 tattatatac aactaagagg cgctttttta tcggctattc atcaccagat cattgaaaac
    18121 caactggata cagaaacaat aactattagt tatgaattta tcctctgtca acatcttatc
    18181 gcaaataccg agttcagcta tttggcactc cctgaaaatt ataaccgatt gtttttacca
    18241 aattcaaaaa accaaacaaa taatcgtttc aaaacgttaa acagcaaagc tattggcagg
    18301 ctacttgctg ctggtggcgt atacaatggg aacattgaag gattcagaga tactgcggaa
    18361 aaactgggtg gagatgcaat aaaaggctat gatcaaatac taaatgaaaa aacagcgggc
    18421 atagcgatag caacagcatc tattctttta acaaagcgtt ctaatgttga tacatataca
    18481 gaaataaata gttacttagg caaacttaga ggtcaacaaa aacttcttga tggtatagac
    18541 ataatagaaa taatatacat taagagacct tcaaaagact tagctaactt acgaaaggag
    18601 tttaataaaa ctgtaagaaa aaattttctt atcaaacttg caaaaacctc cgaagcatct
    18661 ggaagattca acgccgaaga ccttttaaga atgagaaagg gcaatgttcc tctaaattat
    18721 aatgttcacc ataaactatc tctagatgat ggtggtacta atgatttcga aaatttagta
    18781 ttaatcgaaa acgaaccata tcataaagtt tttactaaca tgcaatcacg aatagctaag
    18841 ggaatattag taggtgaaag caaaatcact ccctgggcca ttccatctgg ctcaatttat
    18901 cctcccatga aaaatgtaat gaacgcatcc cacacaatta aacacggagc agtatgatgg
    18961 ttaaaagggt gaaactggca ggtgtggagc ctcgcagatt tccggcatca tagtgcccaa
    19021 tacgggatgc ataaagctcc ctcagactgg aaactccaca aatgaaatat acaccggttg
    19081 gcgttgatat cgcaaaatga accgccccgg gaatcctgga gactaaact
//
LOCUS       DADMJE010000074        18484 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.075, whole genome shotgun sequence.
ACCESSION   DADMJE010000074 DADMJE010000000
VERSION     DADMJE010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 18484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18484
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.075"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..879
                     /locus_tag="JN001_002286"
     CDS             <1..879
                     /locus_tag="JN001_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9053502.1"
                     /translation="WFNIKERGRPMGFFNAASTIGVAVSPPILAAMMLVMGWRGMFIT
                     IGVLGIFLAIGWYMLYRNREHVELTAVEQAYLNAGSVNARRDPLSFAEWRSLFRNRTM
                     WGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMTAFGAAGMLVNGYVTDWLV
                     KGGMAPIKSRKICIIAGMFCSAAFTLIVPQATTSMTAVLLIGMALFCIHFAGTSCRGL
                     IHVAVASRMTASVGSIQNFASFICASFAPIITGFIVDTTHSFRLALIICGCVTAAGAL
                     AYIFLVRQPINDPRKD"
     gene            complement(928..2583)
                     /gene="tsr"
                     /locus_tag="JN001_002287"
     CDS             complement(928..2583)
                     /gene="tsr"
                     /locus_tag="JN001_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY9053503.1"
                     /translation="MLKRIKIVTSLLLVLAVFGLLQLTSGGLFFNALKNDKENFTVLQ
                     TIRQQQSTLNGSWVALLQTRNTLNRAGIRYMMDQNNIGSGSTVAELMQSASISLKQAE
                     KNWADYEALPRDPRQSTAAAAEIKRNYDIYHNALAELIQLLGAGKINEFFDQPTQGYQ
                     DGFEKQYVAYMEQNDRLYDIAVSDNNASYSQAMWILVGVMIVVLAVIFAVWFGIKASL
                     VAPMNRLIDSIRHIAGGDLVKPIEVDGSNEMGQLAESLRHMQGELMRTVGDVRNGANA
                     IYSGASEIATGNNDLSSRTEQQAASLEETAASMEQLTATVKQNAENARQASHLALSAS
                     ETAQRGGKVVDNVVQTMRDISTSSQKIADIISVIDGIAFQTNILALNAAVEAARAGEQ
                     GRGFAVVAGEVRNLAQRSAQAAREIKSLIEDSVGKVDVGSTLVESAGETMAEIVSAVT
                     RVTDIMGEIASASDEQSRGIDQVGLAVAEMDRVTQQNAALVEESAAAAAALEEQASRL
                     TEAVAVFRIQQQQRETSAVVKTVTPAAPRKMAVADSEENWETF"
     gene            complement(2702..3148)
                     /gene="hpaR"
                     /locus_tag="JN001_002288"
     CDS             complement(2702..3148)
                     /gene="hpaR"
                     /locus_tag="JN001_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoprotocatechuate degradation operon regulator
                     HpaR"
                     /protein_id="HAY9053504.1"
                     /translation="MHDSLTIALLQAREAAMSYFRPIVKRHNLTEQQWRIVRILAESP
                     SMDFHDLAYRACILRPSLTGILTRMERDGLVLRLKPINDQRKLYISLTKEGQALYNRA
                     QTQIEEAYRQIEAQFTAEKMQQLTHLLEEFIALGNSRQEAIPGDNE"
     gene            3420..4709
                     /locus_tag="JN001_002289"
                     /pseudo
     CDS             3420..4709
                     /locus_tag="JN001_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710093.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate degradation bifunctional
                     isomerase/decarboxylase"
     gene            4706..6165
                     /gene="hpaE"
                     /locus_tag="JN001_002290"
                     /pseudo
     CDS             4706..6165
                     /gene="hpaE"
                     /locus_tag="JN001_002290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710092.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate semialdehyde
                     dehydrogenase"
     gene            6167..7018
                     /gene="hpaD"
                     /locus_tag="JN001_002291"
     CDS             6167..7018
                     /gene="hpaD"
                     /locus_tag="JN001_002291"
                     /EC_number="1.13.11.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxyphenylacetate 2,3-dioxygenase"
                     /protein_id="HAY9053505.1"
                     /translation="MGKLALAAKITHVPSMYLSELPGKNHGCRQGAIDGHKEISKRCR
                     EMGVDTIIVFDTHWLVNSAYHINCADHFEGVYTSNELPHFIRDMTYNYEGNPELGQLI
                     ADEALKLGVRAKAHNIPSLKLEYGTLVPMRYMNEDKHFKVVSISAFCTVHDFADSRKL
                     GEAILKAIEQYDGTVAVLASGSLSHRFIDDQRAEEGMNSYTREFDRQMDERVVKLWRE
                     GQFKEFCNMLPEYADYCYGEGNMHDTVMLLGMLGWDKYDGKVEFITELFPSSGTGQVN
                     AVFPLPA"
     gene            7028..7408
                     /locus_tag="JN001_002292"
     CDS             7028..7408
                     /locus_tag="JN001_002292"
                     /EC_number="5.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-carboxymethyl-2-hydroxymuconate
                     Delta-isomerase"
                     /protein_id="HAY9053506.1"
                     /translation="MPHFIVECSDNIREEADLPGLFAKVNPTLAATGIFPLAGIRSRV
                     HWVDTWQMADGQRDYAFVHMTLKIGAGRSLESRQQAGEMLFELIKTHFAALMESRLLA
                     LSFEIEELHPTLNFKQNNVHALFK"
     gene            7519..8322
                     /gene="hpaH"
                     /locus_tag="JN001_002293"
     CDS             7519..8322
                     /gene="hpaH"
                     /locus_tag="JN001_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710089.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioic acid hydratase"
                     /protein_id="HAY9053507.1"
                     /translation="MFDKHTHTLIAQRLDQAEKQREQIRAISLDYPEITIEDAYAVQR
                     EWVRLKIAEGRTLKGHKIGLTSKAMQASSQISEPDYGALLDDMFFHDGSDIPTDRFIV
                     PRIEVELAFVLAKPLRGPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFD
                     TISDNAANAGVILGGRPIKPDELDLRWISALMYRNGVIEETGVAAGVLNHPANGVAWL
                     ANKLAPYDVQLEAGQIILGGSFTRPVPARKGDTFHVDYGNMGSISCRFV"
     gene            8333..9121
                     /gene="hpaI"
                     /locus_tag="JN001_002294"
     CDS             8333..9121
                     /gene="hpaI"
                     /locus_tag="JN001_002294"
                     /EC_number="4.1.2.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-2-oxoheptanedioate aldolase"
                     /protein_id="HAY9053508.1"
                     /translation="MENSFKAALKAGRPQIGLWLGLSSSYSAELLAGAGFDWLLSDGE
                     HAPNNVQTVLTQLQAIAPYPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAR
                     EAVHATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREAMKNLPQI
                     LDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIANEQL
                     AKRYLELGALFVAVGVDTTLLARAAEALAARFGAQATAVKPGVY"
     gene            9296..10672
                     /gene="hpaX"
                     /locus_tag="JN001_002295"
     CDS             9296..10672
                     /gene="hpaX"
                     /locus_tag="JN001_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate permease"
                     /protein_id="HAY9053509.1"
                     /translation="MSDTSPAIPESIDPANQHKALTAGQQAVIKKLFRRLIVFLFVLF
                     IFSFLDRINIGFAGLTMGRDLGLSATMFGLATTLFYAAYVIFGIPSNIMLSIVGARRW
                     IATIMVLWGIASTATMFATGPTSLYVLRILVGITEAGFLPGILLYLTFWFPAYFRARA
                     NALFMVAMPVTTALGSIVSGYILSLDGVMALKGWQWLFLLEGFPSVLLGVMVWFWLDD
                     SPDKAKWLTKEDKKCLQEMMDNDRLTLVQPEGAISHHAMQQRSMWREIFTPVVMMYTL
                     AYFCLTNTLSAISIWTPQILQSFNQGSSNITIGLLAAVPQICTILGMVYWSRHSDRRQ
                     ERRHHTALPYLFAAAGWLLASATDHNMIQMLGIIMASTGSFSAMAIFWTTPDQSISLR
                     ARAIGIAVINATGNIGSALSPFMIGWLKDLTGSFNSGLWFVAALLVIGAGIIWAIPMQ
                     SSRPRATP"
     gene            10682..11568
                     /gene="hpaA"
                     /locus_tag="JN001_002296"
                     /pseudo
     CDS             10682..11568
                     /gene="hpaA"
                     /locus_tag="JN001_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224927.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate catabolism regulatory
                     protein HpaA"
     gene            11819..13381
                     /gene="hpaB"
                     /locus_tag="JN001_002297"
     CDS             11819..13381
                     /gene="hpaB"
                     /locus_tag="JN001_002297"
                     /EC_number="1.14.14.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000801462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase,
                     oxygenase component"
                     /protein_id="HAY9053510.1"
                     /translation="MKPEDFRASTQRPFTGEEYLKSLQDGREIYIYGERVKDVTTHPA
                     FRNAAASVAQLYDALHKPEMQDSLCWNTDTGSGGYTHKFFRVAKSANDLRQQRDAIAE
                     WSRLSYGWMGRTPDYKAAFGCALGANPGFYGQFEQNARNWYTRIQETGLYFNHAIVNP
                     PIDRHLPTDKVKDVYIKLEKETDAGIIVSGAKVVATNSALTHYNMIGFGSAQVMGENP
                     DFALMFVAPMDADGVKLISRASYEMVAGATGSPYDYPLSSRFDENDAILVMDNVLIPW
                     ENVLIYRDFDRCRRWTMEGGFARMYPLQACVRLAVKLDFITALLKKSLECTGTLEFRG
                     VQADLGEVVAWRNTFWALSDSMCSEATPWVNGAYLPDHAALQTYRVLAPMAYAKIKNI
                     IERNVTSGLIYLPSSARDLNNPQIDQYLAKYVRGSNGMDHVQHIKILKLMWDAIGSEF
                     GGRHELYEINYSGSQDEIRLQCLRQAQSSGNMDKMMAMVDRCLSEYDQNGWTVPHLHN
                     NDDINMLDKLLK"
     gene            13399..13911
                     /locus_tag="JN001_002298"
     CDS             13399..13911
                     /locus_tag="JN001_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-monooxygenase reductase
                     subunit"
                     /protein_id="HAY9053511.1"
                     /translation="MQLDEQRLRFRDAMASLSAAVNIITTEGDAGQCGITATAVCSVT
                     DTPPSLMVCINANSAMNPVFQGNGKLCVNVLNHEQELMARHFAGMTGMAMEERFSLSC
                     WQKGPLAQPVLKGSLASLEGEIRDVQAIGTHLVYLVEIKNIILSAEGHGLIYFKRRFH
                     PVMLEMEAAI"
     gene            14304..16454
                     /gene="btsT"
                     /locus_tag="JN001_002299"
     CDS             14304..16454
                     /gene="btsT"
                     /locus_tag="JN001_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313340.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate/proton symporter BtsT"
                     /protein_id="HAY9053512.1"
                     /translation="MDTKKLFKHIPWVILGIIGAFCLAVVALRRGEHVSALWIVVASV
                     SVYLVAYRYYSLYIAQKVMKLDPTRATPAVINNDGLNYVPTNRYVLFGHHFAAIAGAG
                     PLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISSRRNGASLGEMIKEEMGPV
                     PGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRFIRPG
                     RVGEVSVIGIVLLVASIYFGGVIAHDPYWGPALTFKDTTITFALIGYAFVSALLPVWL
                     ILAPRDYLATFLKIGVIVGLALGIVVLNPELKMPAMTQYIDGTGPLWKGALFPFLFIT
                     IACGAVSGFHALISSGTTPKLLANETDARFIGYGAMLMESFVAIMALVAASIIEPGLY
                     FAMNTPPAGLGITMPNLHEMGGENAPIIMAQLKDVTAHAAATVSSWGFVISPEQILQT
                     AKDIGEPSVLNRAGGAPTLAVGIAHVFHKVLPMADMGFWYHFGILFEALFILTALDAG
                     TRSGRFMLQDLLGNFIPFLKKTDSLVAGIIGTAGCVGLWGYLLYQGVVDPLGGVKSLW
                     PLFGISNQMLAAVALVLGTVVLIKMKRTQYIWVTVVPAVWLLICTTWALGLKLFSTNP
                     QMEGFFYMASQYKEKIANGTDLTAQQIANMNHIVVNNYTNAGLSILFLIVVYSIIFYG
                     FKTWLAVRNSDKRTDKETPYVPIPEGGVKISSHH"
     gene            16585..16788
                     /locus_tag="JN001_002300"
     CDS             16585..16788
                     /locus_tag="JN001_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbdD/YjiX family protein"
                     /protein_id="HAY9053513.1"
                     /translation="MFGNLGQAKKYLGQAAKMLIGIPDYDNYVEHMKTNHPDKPYMSY
                     EEFFRERQNARYGGDGKGGMRCC"
     gene            16799..17755
                     /gene="yjiA"
                     /locus_tag="JN001_002301"
     CDS             16799..17755
                     /gene="yjiA"
                     /locus_tag="JN001_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313338.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HAY9053514.1"
                     /translation="MNPIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVS
                     VDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLDNLDKGNIQFDRLVIECTGMA
                     DPGPIIQTFFSHEILCQRYLLDGVIALVDAVHADEQMNQFTIAQSQVGYADRILLTKT
                     DVAGEAEKLRERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVSTKPRFHFIA
                     DKQNDISSIVVELDYPVDISEVSRVMENLLLESADKLLRYKGMLWIDGEPNRLLFQGV
                     QRLYSADWDRPWGDEKPHSTMVFIGIQLPEDEIRAAFAGLKK"
     gene            complement(17857..>18484)
                     /locus_tag="JN001_002302"
     CDS             complement(17857..>18484)
                     /locus_tag="JN001_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001569102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin acylase"
                     /protein_id="HAY9053515.1"
                     /translation="PGSAILNVWLTSMLKRTVVAAVPMPFDKWYSASGYETTQDGPTG
                     SLNISVGAKILYEAVQGDKSPIPQAVDLFAGKPQQEVVLAALEDTWETLSKRYGNNVS
                     NWKTPAMALTFRANNFFDVPQAAAEETRHQAEYQNRGTENDMIVFSPTTSDRPVLAWD
                     VVAPGQSGFIAPDGTVDQHYEDQLKMYENFGRKSLWLTKQDVEAHKES"
BASE COUNT         4224 a         5113 c         4936 g         4211 t
ORIGIN      
        1 tggttcaaca tcaaagagcg cggacgcccg atgggcttct tcaacgcagc ttctaccatt
       61 ggcgttgccg taagcccacc gattctggcg gcgatgatgc tggtgatggg ctggcgcggg
      121 atgtttatta ccattggtgt actggggatt tttctcgcca tcggctggta tatgctctat
      181 cgcaaccgcg agcacgtaga actgactgcc gttgagcaag cttatctcaa tgcaggtagc
      241 gtcaatgccc gccgagatcc gctcagtttt gccgaatggc gcagcctgtt ccgtaaccgt
      301 acaatgtggg gaatgatgct cggattcagt ggcatcaact acactgcgtg gctgtatctg
      361 gcctggcttc ctggttacct gcaaacagcc tataacctgg atttaaaaag cacagggttg
      421 atgacggcgt ttggggctgc cgggatgctg gtcaacggtt acgttaccga ctggctggtc
      481 aaagggggaa tggctccgat taaaagccgt aagatctgca ttattgccgg gatgttctgt
      541 tctgccgcct ttacgctgat agtaccacaa gcgacaacat ccatgacggc ggttctgctg
      601 attggcatgg cactgttctg tattcacttt gccggaacat cctgccgggg cttgatccac
      661 gtcgcagttg cttctcgcat gactgcgtcg gtgggcagta tccagaactt tgccagcttc
      721 atctgcgcct cttttgcgcc gatcattact ggttttattg ttgataccac ccactcattc
      781 cgtctggcac taatcatctg cggttgcgtc accgcagcgg gggcactggc gtacatcttc
      841 ctggttcgtc agccgatcaa cgacccacgt aaagattaat ctccttatgc ccgataacat
      901 tttgcttatc gggcattttc atggcgatta aaatgtttcc cagttctcct cgctatctgc
      961 cacggccatt ttacgcggcg cagctggcgt cacggttttt accacagccg atgtttcacg
     1021 ctgctgttgc tgaatccgga acactgccac tgcttcggtc aggcgactgg cctgctcttc
     1081 cagcgcggcg gcggcagcgg cagactcttc caccagcgcg gcgttctgtt gagttacccg
     1141 gtccatctca gcaaccgcta agccaacctg atcgatacca cggctctgct catcagaagc
     1201 agaagcaatt tcgcccataa tgtccgtcac gcgggtcacg gcgctgacaa tctccgccat
     1261 tgtttccccg gcgctttcga ccagcgtaga gccaacatcc actttcccca ccgagtcttc
     1321 aatcaggctt ttaatttcac gagccgcctg ggcgctgcgc tgggccagat tacgcacttc
     1381 tcccgcgacc accgcaaaac cgcgcccttg ctcacccgca cgcgcagcct caaccgccgc
     1441 gttcaaagcc agaatattgg tctggaaggc aatgccgtca attacgctga taatatcggc
     1501 gattttctgc gaactggtgg agatatcgcg catagtctgt accacgttat ctaccacttt
     1561 gccgccgcgt tgcgccgttt cagaagcact taacgccaga tggctggcct ggcgcgcatt
     1621 ttcggcgttc tgcttcaccg ttgcggtcag ttgctccatg ctggctgccg tctcttccag
     1681 cgaagcggcc tgttgctcgg tgcgcgaaga gagatcgtta ttgccggtgg cgatttcgct
     1741 ggcaccgcta tagatggcat tggccccgtt gcgcacatca ccgacggtac gcatcagctc
     1801 tccctgcata tggcgcaaac tctctgccag ttgccccatc tcattagagc catccacctc
     1861 aatcggtttc accagatcgc cgcctgcaat atgacgaatg ctgtcaatca ggcgattcat
     1921 tggcgctacc agcgaggctt taataccgaa ccagacggcg aagatgaccg ccagtacgac
     1981 gatcatcacg cccaccagaa tccacatcgc ctggctgtag gaggcattgt tatcgctgac
     2041 ggcgatatca tagagccgat cgttttgctc catgtaagcc acatactgct tctcgaaacc
     2101 gtcctgatat ccctgggtcg gctgatcaaa gaactcgttg attttgcctg cacctaacag
     2161 ttggatcagc tccgccagcg cattgtgata aatatcgtaa ttacgtttga tctctgccgc
     2221 tgcggcggtg ctctgacgcg ggtcacgcgg caacgcttcg taatccgccc agtttttttc
     2281 cgcctgtttc agcgaaatac tggcactctg catcagctca gcaacggttg aaccgctacc
     2341 aatattattc tgatccatca tgtagcggat acccgcgcgg ttgagggtgt tacgcgtctg
     2401 caacaacgcg acccagctgc cattcagcgt ggattgctgc tggcgaatgg tttgtaaaac
     2461 agtgaaattt tctttgtcat tctttaaggc attaaagaac agaccgcctg atgtcagttg
     2521 taaaaggcca aaaacggcca aaaccagcag taagctggtc acgatcttga tacgttttaa
     2581 catggtttct ctttcctgtg gaccgatgca agattttcgg cttggaaagc aaaaacttta
     2641 tgaaaaggtg taacccgcca tccatggaaa aaccaggcgc tggttatcag atactaaaaa
     2701 gttattcatt atcgcccggg atggcttctt gtcgggaatt gcccagagca ataaattcct
     2761 ctaacagatg ggttaactgt tgcattttct cggcagtaaa ctgagcttca atctgccgat
     2821 aggcttcttc aatctgtgtc tgagcgcggt tatacagcgc ctgcccctct ttggttagcg
     2881 agatatagag cttccgctga tcattgatcg gctttaatcg caacactaaa ccgtcgcgtt
     2941 ccatccgcgt gagaatcccg gtcaggcttg ggcgcaaaat gcaggcgcga tacgccagat
     3001 cgtgaaaatc cattgatggg ctttccgcca gaatacgcac gatgcgccac tgttgctcag
     3061 tcaaattatg ccgtttaacg attgggcgaa aataactcat cgccgcttct cgcgcctgga
     3121 gcaacgcaat ggttagtgag tcgtgcatta tctttcccct gaaaaattca aaatcattaa
     3181 tatagaaaca gttaatcgtc acgttaccgg gactgcgctg cccctgcaat tcctgatttt
     3241 atcaaaattg atgatatttt attaacttac tgatatttaa tattttatta tctttaaatg
     3301 taaatagttt gttaattaga tcacatttac atcacttact tttgccaaac tacgcaatcg
     3361 ggaataaaag caatcattaa catattaatg attaagataa tcgaatccga ggagtggtaa
     3421 tgaaaggcac tatcttcgcc gtagcgttga accatcgcag ccaacttgat gcatggcagg
     3481 aagcgttcca gcaatccccc tacaaagccc cgcctaaaac tgcggtctgg tttattaaac
     3541 cgcgcaatac ggtgattggt tgcggtgaac cgattccctt tccacagggt gaaaaggtac
     3601 tgagcggtgc gactgttgcg ctgattgtgg gaaaaacggc gacgaaagta cgtgaagaag
     3661 atgcggcaga gtacatcgcc ggatatgcgc tggctaacga cgtcagcctg ccggaagaga
     3721 gcttttaccg cccggcaatc aaagcaaaat gtcgtgatgg attctgcccc attggcgaaa
     3781 ccgtggctct cagcaatgtc gataatctga ccatctatac cgagatcaac gggcgtcctg
     3841 ccgatcactg gaataccgcc gatttacaac gtaacgccgc gcagttgctg agcgccctga
     3901 gcgaatttgc cacgctgaat ccaggcgacg ccattctgct cggcacgcca caggcgcgcg
     3961 tggaaataca gccaggcgat cgcgttcgtg ttctcgcaga aggtttcccg ccgctggaaa
     4021 atccggtagt ggacgaacgt gaagtgacca cgcgcaagag cttcccaacg cagccacacc
     4081 cgcacggcac gctgtttgcc ctcggcctga actacgccga ccacgccagc gaactggaat
     4141 ttaagccacc ggaagaaccg ctggtattcc tgaaagcgcc aaataccctc actggcgata
     4201 accagacctc cgtgcgtcca aacaatattg aatacatgca ctatgaagcg gagctggtgg
     4261 tagttattgg caaacaggcg cgtaacgtca gcgaagccga tgccatggat tatgtcgcgg
     4321 gctacaccgt gtgtaacgac tacgccattc gtgactatct ggaaaactac taccgcccta
     4381 acctgcgggt aaaaagccgc gacggactga cgccgatgct ttcaaccatc gtgccgaaag
     4441 aggcgatccc ggacccgcat aatctgaccc ttcgcacctt cgtcaacggc gagttacgcc
     4501 agtaaggcac caccgccgat ctgatcttca gcgtgccctt cctgatcgcc tacttaagtg
     4561 aatttatgac cctgaatccg ggcgacatga tcgccaccgg cacacccaaa ggcttatctg
     4621 acgtggtgcc tggcgatgaa gtagtggtgg aagtagaagg cgtgggccgc ctggtgaacc
     4681 gaattgtgag tgaggataca gcgaaatgaa aaaagtaaat cattggatca acggcaaaaa
     4741 tgttgcaggt aacgactact tccagaccac caatccggca acgggtgaag tgctggcgga
     4801 tgtggcctct ggcggtgaag cggagatcaa tcaggcggta gcggcagcga aagaggcgtt
     4861 cccgaaatgg gccaatctgc cgatgaaaga gcgtgcgcgc ctgatgcgcc gtctgggcga
     4921 tctgatcgac cagaacgtgc cagagatcgc cgcgatggaa accgcggaca ccggcctgcc
     4981 gatccatcag accaaaaatg tgttgatccc acgcgcttcc cacaactttg aatttttcgc
     5041 ggaagtctgc cagcagatga acggcaagac ctatccggtt gacgacaaga tgctcaacta
     5101 cacgctggtg cagccggtgg gcgtttgtgc gctggtatcg ccgtggaacg taccgtttat
     5161 gaccgccaca tggaaggtcg cgccgtgtct ggcgctgggc aataccgcgg tactgaaaat
     5221 gtcggaactc tccccgctga ccgcctgggt gagctggcgc tggaagccgg tattccggca
     5281 ggcgtgctga acgtggtaca gggctacggc gcaaccgcag gggatgcgct ggttcgtgat
     5341 catgacgtac gtgccgtgtc gttcaccggc ggtacggcca ccgggcgcaa catcatgaaa
     5401 aacgccgggc tgaaaaaata ctccatggaa ctgggcggta aatcgccggt gctgattttt
     5461 gaagatgccg atattgaacg cgcgctggac gccgccctgt tcaccatctt ctcgatcaac
     5521 ggcgaacgct gcaccgccgg ttcacgcatc tttattcagc aaagcatcta cccggaattc
     5581 gttaaacgct ttgccgaacg cgccaaccgt ctgcgcgtgg gcgatccgaa cgatccgaat
     5641 acccaggttg gcgcgcttat cagccagcag cactgggaaa aagtctccgg ctatatccgt
     5701 ctcggcattg aagaaggcgc caccctgctg gcgggcggcc cggataaacc gtctgacctg
     5761 cctgcacacc tgaaaggcgg caacttcctg cgcccaacgg tgctggcaga cgttgataac
     5821 cgtatgcgag tcgcccaaga agagattttc gggccggtcg cctgcctgct gccgtttaaa
     5881 gacgaagctg aaggcttacg cctggcaaac gacgtggagt acggcctcgc gtcgtacatc
     5941 tggacacagg atgtcagcaa agtgttacgc ctggcgcgtg gcattgaagc tggcatggtg
     6001 ttcgtcaaca cccagaacgt gcgtgacctg cgccagccat ttggcggcgt aaaagcctcc
     6061 ggcaccgggc gtgaaggcgg tgagtacagc ttcgaagtgt tcgcggaaat gaagaacgtc
     6121 tgcatttcca tgggcgacca tccaattccg aaatggggag tctgatatgg gtaagttagc
     6181 gttagccgcc aagatcacgc acgtaccgtc gatgtatctc tctgaactgc cagggaaaaa
     6241 ccacggttgc cgccagggcg cgatcgacgg gcataaagag atcagcaagc gttgccggga
     6301 aatgggcgtc gataccatta tcgttttcga tacccactgg ctggtcaaca gtgcttatca
     6361 catcaactgt gcagaccatt ttgaaggcgt ctacaccagc aacgagctgc cgcattttat
     6421 ccgcgatatg acctacaact acgagggcaa cccggagttg gggcagctta ttgccgatga
     6481 agccttaaag ctcggcgtgc gggcaaaagc gcacaacatt cccagcctga aactggaata
     6541 cggcacgctg gtgccgatgc gctacatgaa tgaagacaag cacttcaaag tggtctccat
     6601 ttcggctttc tgcacggttc acgattttgc cgacagccgc aagctgggcg aagcgattct
     6661 gaaagcgatc gaacagtacg acggcaccgt ggcggtcctt gccagcggtt cgttatcgca
     6721 ccgctttatt gacgatcagc gtgcagaaga agggatgaac agctacaccc gcgagttcga
     6781 ccgccagatg gacgagcgcg tggtgaagtt gtggcgcgaa ggccagttca aagagttctg
     6841 caatatgctg ccggagtacg ccgactactg ctacggcgaa ggcaatatgc acgacacggt
     6901 gatgctgctg gggatgctcg gctgggataa atacgacggc aaggtggagt ttatcaccga
     6961 gctattccca agctctggca ccggtcaggt taacgctgtt ttcccgcttc ccgcgtaagg
     7021 acgttttatg ccgcacttta tcgttgaatg cagtgacaac atccgcgaag aagccgacct
     7081 gccggggttg ttcgccaaag tgaatccgac gctggcagcc acgggtattt ttccgctggc
     7141 gggtattcgc agccgcgtgc attgggtcga tacctggcag atggccgacg ggcagcgtga
     7201 ttatgccttc gtgcatatga cgttgaaaat cggcgcaggt cgcagcctgg aaagccgtca
     7261 gcaggcgggt gaaatgctgt ttgaactgat taaaacgcac ttcgccgccc tgatggagag
     7321 ccgcctgctg gcgttgtcgt ttgagattga agagctgcat ccgacgctga attttaaaca
     7381 aaacaacgtg cacgcattgt ttaagtagcg cgcagattgc ccggtggcgc tgcgcttacc
     7441 gggcctacaa aaccccaaac cgtacaccgt aggccggata aggcgcagcc gcatccggca
     7501 atgccacagg atatcgctat gttcgataaa cacacccaca ccctgatcgc ccagcgtctg
     7561 gatcaggcag aaaaacagcg cgaacagatc cgcgcgatct cgctggatta cccagagatc
     7621 accatcgaag acgcttacgc ggtgcagcgc gaatgggttc gcctgaaaat cgccgaaggc
     7681 cgtacgctga aaggccacaa aatcggtctg acctcaaaag caatgcaggc cagctcgcag
     7741 atcagcgaac cagattacgg tgccctgctg gatgacatgt tcttccacga tggcagcgat
     7801 atcccgaccg atcgctttat cgtgccgcgc attgaagtgg agctggcttt cgtgctggca
     7861 aaaccgctgc gtgggccaaa ctgcacgctg ttcgacgtct acaacgccac ggactacgtg
     7921 atcccggcgc tggagctgat cgacgctcgc tgccacaaca tcgatccgga aacccagcgc
     7981 ccgcgcaaag tgttcgacac catttctgat aacgccgcca acgccggggt gatcctcggt
     8041 ggtcgtccga tcaaaccaga cgaactggat ctgcgttgga tctccgccct gatgtatcgc
     8101 aatggcgtga ttgaagaaac cggcgtcgcc gctggcgtgc tgaatcatcc ggcaaacggc
     8161 gtggcctggc tggcgaacaa actcgcaccg tatgacgtac aactggaagc cgggcaaatc
     8221 attctcggtg gttcgttcac ccgcccggtt ccggcgcgta agggcgacac cttccacgtc
     8281 gattacggca acatgggttc cattagctgc cgctttgttt aaggagagaa cgatggaaaa
     8341 cagctttaaa gcggcgctga aagcaggccg tccgcagatc ggattatggc tggggctgag
     8401 tagcagctac agcgcagagt tactggccgg agcaggattc gactggttgt tgagcgacgg
     8461 tgagcacgcg ccgaataacg tgcaaaccgt gctcacccag ctacaggcga ttgcgcccta
     8521 ccccagccag ccggtagtac gtccgtcgtg gaacgatccg gtgcaaatca aacaactgct
     8581 ggacgtcggc acacaaacct tgctggtgcc gatggtacaa aacgctgacg aagcccgtga
     8641 agcggtacac gccacccgtt atccccccgc cggtattcgc ggtgtgggca gtgcgctggc
     8701 ccgcgcctcg cgctggaatc gtattcctga ttacctgcaa aaagccaacg atcaaatgtg
     8761 cgtgctggtg cagatcgaaa cgcgtgaggc aatgaagaac ttaccgcaga ttctggacgt
     8821 ggaaggcgtc gacggcgtgt ttatcggccc ggcggatctg agcgccgata tgggttatgc
     8881 cggtaatccg cagcacccgg aagtacaggc cgccattgag caggcgatcg tgcagatccg
     8941 tgaatcgggc aaagcgccgg ggatcctgat cgccaatgag caactggcaa aacgctatct
     9001 ggaactgggc gcgctgtttg tcgccgtcgg cgttgacacc accctgctcg cccgcgccgc
     9061 tgaagcgctg gcagcacggt ttggtgcgca ggccaccgcc gtgaagcccg gcgtgtatta
     9121 atgccggatg cgctgcactt atccggccta cactcgcacc aaaccgtagg ccggataagg
     9181 cgtttacgcc gcatccggca aaaagccgta ccaaatcgcg gaccggataa ggcgttacgc
     9241 cgcatccgcc ataaaccttg tcgtacccta caaaaatccc attagaggaa gaaaaatgag
     9301 cgacacctca cctgccatac cggagagtat cgatccggcg aatcagcata aagcgctgac
     9361 tgccggacaa caggcggtta ttaagaagct atttcgccgc ctgatcgtct ttctgttcgt
     9421 gctgtttatc ttctcgttcc ttgatcgcat caacatcggc tttgccggac tcacgatggg
     9481 acgcgacctc ggtctgagcg ccaccatgtt tggcctcgct accaccctgt tctatgccgc
     9541 ttatgtcatc ttcggcattc ccagcaacat tatgctgagt attgtcggtg cgcggcgctg
     9601 gatcgccacc atcatggtgc tctggggcat cgcctctact gccaccatgt ttgccactgg
     9661 ccccaccagc ttgtacgtac tgcgtatact ggttggcatt accgaagccg gctttctgcc
     9721 tggtattctg ctgtatttaa ccttctggtt tccggcctat ttccgcgccc gtgccaacgc
     9781 cttgtttatg gtagcaatgc cggtaacgac agcgttgggc tcgatcgttt ccggctacat
     9841 tttgtcgctg gatggcgtca tggcattaaa aggctggcag tggctgtttt tgctggaagg
     9901 cttcccgtcg gtattactcg gcgtcatggt gtggttctgg cttgatgact caccggacaa
     9961 agctaagtgg ctgacgaaag aagacaaaaa atgcctgcaa gagatgatgg ataacgatcg
    10021 tctgacgctg gttcagccag agggagccat cagccaccac gccatgcaac aacgcagtat
    10081 gtggcgggag atcttcactc cggtggtgat gatgtatacc ctggcgtatt tctgcctgac
    10141 caacacactt agtgcgatca gcatctggac accgcagatc ctgcaaagtt ttaatcaggg
    10201 cagcagtaat atcaccatcg gcctgctggc cgccgtaccg cagatttgta ccattctcgg
    10261 gatggtctac tggagccgtc actcagatcg ccgccaggaa cgaaggcatc acaccgccct
    10321 tccttatttg ttcgctgccg caggttggtt actggcttcg gcaactgatc acaacatgat
    10381 ccagatgctg gggatcatta tggcttcgac cggatcattc agcgcaatgg cgattttctg
    10441 gacaacaccg gatcagtcca tcagcctgcg ggcacgagcg atcggtattg cggtgatcaa
    10501 cgccactggc aacattggtt cagcgttaag tccgtttatg atcggctggt tgaaagattt
    10561 gaccggcagc tttaacagtg gattgtggtt tgttgccgcg ctgctggtga ttggtgcggg
    10621 gattatctgg gcgattccaa tgcagtcctc ccgtccgcga gcgaccccgt aaggaacgac
    10681 gatgtgtgac cgtcagattg ccaatattga tatcagcaaa gagtacgatg aaagcctggg
    10741 cacggacgat gtgcattatc agtcgttcgc ccgcatggcg gcattttttg gccgccatat
    10801 gctgccacat cgccacgaac agtactttca gatgcatttc ctcaatagcg gacagattga
    10861 gctacagctt gacgatcatc gctactcggt ggaagcgccc ctgtttgtcc tgacgccgcc
    10921 gtcagtacct catgcgttta ttacggagtc tgacgccgac ggtcatgtgt tgacggtacg
    10981 ggaagatctg atctggcccc tgctggaagt tctttatccg ggcactcggg aaaccttcgg
    11041 cctgccgggg gcctgtcact ggcagataaa cccgacgaac tggcggcgct ggaacactat
    11101 tggcaactga tagagcggga atcggtggaa caactgcctg gacgggaaca caccctgacg
    11161 ttactggcac aggcagtgtt caccctactg ctgcgtaacg caaaactcga cgaccatgcc
    11221 gccagcggga tgcgcggaga attaaaactg ttccagcgtt ttaatatgct gattgaaagc
    11281 cattttcatc agcactggac agtaccggat tacgctaacg aactgcatat caccgaatca
    11341 cgactcacgg acatctgccg tcgctttgcc aaccgtccgc caaaacggtt gattttcgac
    11401 aggcagctgc gagaagccaa gcggctgctg ctgttttctg ataacgccgt gaacaatatt
    11461 gcctggcaac tcggttttaa ggatccggct tattttgcgc gcttttttaa tcgcttagtc
    11521 ggttgctcgc ccagtgctta tcgcgccaaa aaagtacctg tgacgtgaaa atcccttagc
    11581 cttaacggga aaccaggcac cacctgctat tcccctttct ccgcctggag caaggggatt
    11641 tagtaacgtc aaaaatcgct aaaagcgacc tcgatcacaa aaccgtaccc gacctgaaaa
    11701 gtaccagcca ttgtcccaaa agtctcttcc cgtaatcgcc cctgcaagct ttaattgaat
    11761 aacaaaaaca acacacaaaa ttaacaatcg tattccgatt aatactgtag aggtcgacat
    11821 gaaaccagaa gatttccgcg ccagtaccca acgtccgttc accggggaag agtatctgaa
    11881 aagcctgcag gatggtcgcg agatctatat ctatggcgag cgagtgaaag acgtcactac
    11941 tcatccggca tttcgtaatg cggcagcgtc tgttgcccaa ctgtacgacg cgctacacaa
    12001 accggagatg caggactctc tgtgctggaa caccgacacc ggcagcggcg gctataccca
    12061 taaattcttc cgcgtggcga aaagtgccaa cgacctgcgc cagcaacgcg atgccatcgc
    12121 tgagtggtca cgcctgagct atggctggat gggccgtacc ccagactaca aagctgcttt
    12181 cggttgcgca ctgggcgcga atccgggctt ttacggtcag ttcgagcaga acgcccgtaa
    12241 ctggtacacc cgtattcagg aaactggcct ctactttaac cacgcgattg ttaacccacc
    12301 gatcgatcgt catttgccga ccgataaagt aaaagacgtt tacatcaagc tggaaaaaga
    12361 gactgacgcc gggattatcg tcagcggtgc gaaagtggtt gccaccaact cggcgctgac
    12421 tcactacaac atgattggct tcggctcggc acaagtgatg ggcgaaaacc cggacttcgc
    12481 actgatgttc gttgcgccaa tggatgccga tggcgtaaaa ttaatctctc gcgcctctta
    12541 tgagatggtc gcgggtgcta ccggctcgcc atacgactac ccgctctcca gccgcttcga
    12601 tgagaacgat gcgattctgg tgatggataa cgtgctgatc ccatgggaaa acgtactgat
    12661 ctaccgcgat ttcgatcgct gccgtcgctg gacaatggaa ggcggttttg cccgtatgta
    12721 tccgctgcaa gcctgtgtgc gcctggcagt gaaattagac ttcattacag cactgctgaa
    12781 aaaatcactc gaatgtaccg gcaccctgga gttccgtggt gtacaggccg atctcggtga
    12841 agtggtggcg tggcgcaaca ccttctgggc attgagtgac tcgatgtgtt ctgaagcgac
    12901 gccgtgggtc aacggggctt atttaccgga tcatgccgca ctgcaaacct atcgcgtact
    12961 ggcaccaatg gcctacgcga agatcaaaaa cattatcgaa cgcaacgtta ccagtggcct
    13021 gatctatctc ccttccagtg cccgtgacct gaacaatccg cagatcgacc agtatctggc
    13081 gaagtatgtg cgcggttcga atggtatgga tcacgtccag cacatcaaga tcctcaaact
    13141 gatgtgggac gccattggca gcgagtttgg tggtcgccac gaactgtatg aaatcaacta
    13201 ctccggtagc caggatgaga ttcgcctgca gtgtctgcgc caggcacaaa gctccggcaa
    13261 tatggacaag atgatggcga tggttgatcg ctgcctgtcg gaatacgacc agaacggctg
    13321 gactgtgccg cacttgcaca acaacgacga tatcaacatg ctggataagc tgctgaaata
    13381 acgcagcagg aggttaagat gcaattagat gaacagcgcc tgcgctttcg tgacgcgatg
    13441 gccagcctgt cggcagcggt aaatattatc accaccgagg gcgacgccgg acaatgcggg
    13501 attacggcaa cggccgtctg ctcggtcacg gatacaccac catcgctgat ggtgtgcatt
    13561 aacgccaaca gtgcgatgaa cccggttttt cagggcaacg gtaagttgtg cgtcaacgtc
    13621 ctcaaccatg agcaggaact gatggcacgc cacttcgcgg gcatgacagg catggcgatg
    13681 gaagagcgtt ttagcctctc atgctggcaa aaaggtccgc tggcgcagcc ggtgctgaaa
    13741 ggttcgctgg ccagtcttga aggtgagatc cgcgatgtgc aggcaattgg cacacatctg
    13801 gtgtatctgg tggagattaa aaacatcatc ctcagtgcag aaggtcacgg acttatctac
    13861 tttaaacgcc gtttccatcc agtgatgctg gaaatggaag ctgcgattta agctccagcc
    13921 ccttcacgta ttcgtcgaag gggcattttt attgtgatct caatcacata tccacccgat
    13981 gaataattct tgcccaaccg ctcaccgcca ttcctgaccg cttacgtccc taaaataacc
    14041 actcagttat ttaccttact ttacgcgcgc gtaactctgg caacatcact gcaggatagc
    14101 ggtcaattta cctcctcaaa cgcaacgcaa acctagaacg gcttcggcct atgattaaca
    14161 aattactcta tgaattttgg tttgcaggaa ggcagcaagt gagtgaatcc ccgggagctt
    14221 acaacagtaa gtgacagagg tgaacgaacg cagctgccgc acctgtaagc caaaagacga
    14281 cgagtaaaat gccaggtttt actatggata cgaaaaaact attcaagcac ataccctggg
    14341 tgattctcgg aatcatcggt gcattctgcc tcgcggtagt tgcattacgt cggggggagc
    14401 acgtcagcgc cctgtggatc gtggtcgcct ctgtgtcggt gtatctggtg gcgtatcgct
    14461 actacagtct gtacatcgcc cagaaggtga tgaaactcga ccccacgcgc gcgacgcctg
    14521 cggttattaa caacgacggt ctgaactacg ttccgaccaa ccgttacgtg ttgtttggtc
    14581 accacttcgc cgctatcgcc ggtgccggtc cgctggttgg tccggtgctc gccgcgcaga
    14641 tgggctacct gcctggcacg ctgtggctgc tggcgggggt agtactggcc ggtgcggttc
    14701 aggactttat ggtgctgttt atctcctctc gccgtaacgg cgcatctctc ggtgagatga
    14761 tcaaagaaga gatgggacca gtaccgggga ctatcgcgct gtttggctgt ttcttaatca
    14821 tgatcatcat cctcgccgtt ctggcgctga ttgtggttaa agccctggcc gaaagtccgt
    14881 ggggtgtctt caccgtttgc tcaaccgtac cgattgcgct gtttatgggt atctacatgc
    14941 gctttatccg tccggggcgt gtaggtgaag tttctgttat tggtatcgtg ctgctggttg
    15001 cctctatcta tttcggtggc gtgattgctc acgatccgta ctggggtccg gcactgacct
    15061 ttaaagacac caccattacc ttcgcgctga ttggctatgc gtttgtttcc gcactgctgc
    15121 cggtgtggct gatcctcgca ccgcgcgact atctggcaac cttcctgaaa atcggcgtta
    15181 tcgtcggcct ggcgctgggt atcgtggtac tgaacccgga actgaaaatg cctgcaatga
    15241 cccagtacat tgacggtact ggcccgctgt ggaaaggcgc tctgttcccg ttcctgttca
    15301 tcaccatcgc ctgtggtgcg gtatctggct tccacgcgct gatctcttcc ggtacgacgc
    15361 cgaaattgct ggctaacgaa accgacgcgc gtttcattgg ctacggcgca atgctgatgg
    15421 aatccttcgt ggcgattatg gcgctggttg ctgcgtccat catcgaaccg ggtctttact
    15481 tcgcgatgaa taccccgcct gctggccttg gcatcaccat gcctaacctg catgaaatgg
    15541 gtggcgagaa cgcgccgatc atcatggcgc agctgaaaga cgttaccgca cacgcggcgg
    15601 cgaccgtcag ctcctggggc ttcgtgattt cgccagagca gatcctgcaa accgcgaaag
    15661 acattggtga gccttctgtc ctgaaccgtg caggtggcgc gccgacgctg gcggtaggta
    15721 tcgctcacgt gttccacaaa gtgctgccga tggctgacat gggcttctgg tatcacttcg
    15781 gtattctgtt cgaagccctg ttcatcctga ccgcgctgga tgcgggtact cgttctggcc
    15841 gctttatgct gcaagacctg ctgggtaact tcatcccgtt cctgaaaaaa accgactctc
    15901 tggttgccgg tatcatcggt actgcgggct gtgtgggtct gtggggctac ctgctgtatc
    15961 agggcgtggt cgatccgctg ggcggcgtta agagcctgtg gccgctgttc ggtatttcca
    16021 accagatgct ggcagccgta gcgctggtac tgggcaccgt tgtgctgatt aagatgaagc
    16081 gcacccaata catctgggta actgttgttc cggctgtatg gctgcttatc tgcaccacct
    16141 gggcgctggg tctgaaactg ttcagcacca acccgcagat ggaaggcttc ttctacatgg
    16201 caagccagta caaagagaag attgctaacg gtactgacct gacggcgcag cagattgcca
    16261 acatgaacca catcgttgtg aacaactaca ccaacgcagg cctgagtatt ctgttcctga
    16321 ttgtggtgta cagcatcatc ttctacggtt tcaaaacctg gcttgcggtg cgtaacagcg
    16381 acaaacgtac tgacaaagaa actccgtacg ttccaatccc ggaaggcggc gtgaagatct
    16441 cttcgcacca ctaaccggtt gccggatgcg ctgcgcgtat ccggcctaca aagtgtctat
    16501 cgtaggccgg ataaggcgtt tacgccgcat ccggcaaatc cctagcccgg accttccggg
    16561 ctttacgcat atctggaagg caaaatgttt ggtaacttag gacaggcaaa aaaatatctc
    16621 ggccaggcgg cgaagatgtt gattggcatt ccagactacg acaactacgt cgagcatatg
    16681 aagaccaacc atcccgacaa gccgtacatg agctatgaag aattcttccg cgaacgccag
    16741 aacgcgcgct acggcggcga tggtaaaggc ggtatgcgct gttgttaatg gagagagcat
    16801 gaacccgatt gcagttaccc tactcaccgg ttttttaggc gcgggcaaaa ccaccctgct
    16861 gcgccatatt cttaacgaac aacacggcta caagattgcc gtgattgaaa acgaattcgg
    16921 cgaagtctcc gttgatgatc aactgattgg cgaccgcgcc acgcagatca aaacgctgac
    16981 caacggctgc atctgctgtt cgcgctccaa cgagctggaa gacgcactac tcgacctgct
    17041 ggataatctc gacaagggca atattcagtt cgaccgtctg gtcattgaat gcaccggcat
    17101 ggccgatccc ggcccgatta ttcagacctt cttctcccat gagattttat gccagcgcta
    17161 cctgctggac ggggtgattg cgctggtgga tgcggtacat gccgatgagc agatgaacca
    17221 gttcaccatc gcccagtccc aggttggcta cgccgaccgt attctgctga cgaaaaccga
    17281 cgtcgcaggc gaagcagaga aactgcgtga acgcctggcg cgcatcaacg cccgcgcacc
    17341 ggtctacacc gttacccacg gcgatatcga cctgggcctt ctgttcaaca ccaacggttt
    17401 tatgctggaa gaaaacgtcg tcagcaccaa accgcgtttc cactttatcg cggacaaaca
    17461 aaacgatatt tcgtcgattg tggtggaact ggattacccg gtagatatca gcgaagtttc
    17521 ccgggtgatg gaaaacctgc tgctggaatc ggcggataaa ctgctgcgtt acaaagggat
    17581 gctgtggatt gacggcgaac ctaaccgcct gctgttccag ggcgtccagc gcctctacag
    17641 cgccgactgg gaccgcccgt ggggcgatga aaaaccgcat agcacgatgg tgtttatcgg
    17701 gattcagttg ccggaggatg agattcgggc ggcgtttgcg ggactcaaaa agtaaccagc
    17761 cctccaacat cacaatacct gagactttat caccctcata ttcctccaga atatgagggc
    17821 attcgggctt aattatctct gaacgtgcaa cacttcctac gactccttat gcgcctccac
    17881 atcctgcttc gttaaccaga gcgacttacg accaaaattt tcgtacattt tcagctgatc
    17941 ttcatagtgc tgatcaactg ttccatcggg agcaataaac ccactctgac cgggtgcgac
    18001 cacatcccag gcaagcaccg gacgatcgct tgtcgttggt gagaaaacaa tcatatcgtt
    18061 ttctgttcca cggttttgat actccgcctg atgacgcgtt tcttccgctg cggcctgcgg
    18121 tacatcaaag aaattatttg cccggaacgt taaggccatt gcaggtgttt tccagttact
    18181 cacattattg ccatagcgtt tggaaagagt ctcccaggta tcttccagcg cagccaacac
    18241 aacctcctgc tgtggtttcc cagcaaacag atcaaccgcc tgtgggattg gtgatttgtc
    18301 tccctgcacc gcctcataca aaatttttgc tccaacactt atattcagcg aaccagttgg
    18361 gccgtcctgg gttgtttcgt agccactggc gctgtaccac ttatcaaatg gcataggtac
    18421 ggcagccact acggtacgct tcaacatact ggtcagccaa acgttcagga tggcagagcc
    18481 tggc
//
LOCUS       DADMJE010000075        17926 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.076, whole genome shotgun sequence.
ACCESSION   DADMJE010000075 DADMJE010000000
VERSION     DADMJE010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17926)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17926)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17926
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.076"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..118)
                     /locus_tag="JN001_002303"
     CDS             complement(<1..118)
                     /locus_tag="JN001_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY9053516.1"
                     /translation="MKRKVLAMLVPALLVAGAANAAEIYNKDGNKVDFYGKMV"
     gene            679..1044
                     /locus_tag="JN001_002304"
     CDS             679..1044
                     /locus_tag="JN001_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416472.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY9053517.1"
                     /translation="MEKCDFYHIIVLSLNFPGYLKMEYGSTKMEERLSRSPGGKLALW
                     AFYTWCGYFVWAMARYIWVMSRIPDAPVSGFESDLGSTAGKWLGALVGFLFMALVGAL
                     LGSIAWYTRPRPARSRRYE"
     gene            1084..1779
                     /locus_tag="JN001_002305"
     CDS             1084..1779
                     /locus_tag="JN001_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohydrolase"
                     /protein_id="HAY9053518.1"
                     /translation="MDLQHWQAQFENWLKNHHQHQDAAHDVCHFRRVWATAQKLAADD
                     DVDMLVILTACYFHDIVSLAKNHPQRQRSSILAAEETRRLLREEFEQFPAEKIEAVCH
                     VIAAHSFSAQIAPLTTEAKIVQDADRLEALGAIGLARVFAVSGALGVALFDGEDPFAQ
                     HRPLDDKRYALDHFQTKLLKLPQTMQTARGKQLAQHNAHFLVEFMAKLSAELAGENEG
                     VDHKVIDAFSPAG"
     gene            1846..3264
                     /locus_tag="JN001_002306"
     CDS             1846..3264
                     /locus_tag="JN001_002306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA cytosine methyltransferase"
                     /protein_id="HAY9053519.1"
                     /translation="MQENISVTDSYSTGNAAQAMLEKLLQIYDVKTLVAQLNGVGENH
                     WSAAILKRALANDSAWHRLSEKEFAHLQTLLPKPPAHHPHYAFRFIDLFAGIGGIRRG
                     FESIGGQCVFTSEWNKHAVRTYKANHYCDPATHHFNEDIRDITLSHKEGVSDEAAAEH
                     IRQHIPEHDVLLAGFPCQPFSLAGVSKKNSLGRAHGFACDTQGTLFFDVVRIIDARRP
                     AMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDVADAEDNGPDDPKIIDGKHFLPQHR
                     ERIVLVGFRRDLNLKADFTLRDISECFPAQRVTLAQLLDPMVEAKYILTPVLWKYLYR
                     YAKKHQARGNGFGYGMVYPNNPQSVTRTLSARYYKDGAEILIDRGWDMAKGEKDFDDP
                     LNQQHRPRRLTPRECARLMGFEAPGEAKFRIPVSDTQAYRQFGNSVVVPVFAAVAKLL
                     EPKIKQAVALRQQEAQHGRRSR"
     gene            3245..3715
                     /locus_tag="JN001_002307"
     CDS             3245..3715
                     /locus_tag="JN001_002307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="very short patch repair endonuclease"
                     /protein_id="HAY9053520.1"
                     /translation="MADVHDKATRSKNMRAIATRDTAIEKRLASLLTGQGLAFRVQDA
                     SLPGSPDFVVDEYRCVIFTHGCFWHHHHCYLFKVPATRTEFWLEKIGKNVERDRRDIS
                     RLQELGWRVLIVWECALRGREKLTDEALTERLEEWICGEGASAQIDTQGIHLLA"
     gene            complement(3704..4624)
                     /gene="yedA"
                     /locus_tag="JN001_002308"
     CDS             complement(3704..4624)
                     /gene="yedA"
                     /locus_tag="JN001_002308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="drug/metabolite exporter YedA"
                     /protein_id="HAY9053521.1"
                     /translation="MRFRQLLPLFGALFALYIIWGSTYFVIRIGVESWPPLMMAGVRF
                     LAAGILLMAFLLLRGHKLPPLRPLLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVV
                     VATVPLFTLCFSRLFGIKTRKLEWVGIAIGLAGIIMLNSGGNLSGNPWGAILILIGSI
                     SWAFGSVYGSRITLPVGMMAGAIEMLAAGVVLMIASMIAGEKLTALPSLSGFLAVGYL
                     ALFGSIIAINAYMYLIRNVSPALATSYAYVNPVVAVLLGTGLGGETLSKIEWLALGVI
                     VFAVVLVTLGKYLFPAKPVVAPVIQDASSE"
     gene            4797..5714
                     /locus_tag="JN001_002309"
     CDS             4797..5714
                     /locus_tag="JN001_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF808 domain-containing protein"
                     /protein_id="HAY9053522.1"
                     /translation="MLLAGSSLLTLLDDIATLLDDISVMGKLAAKKTAGVLGDDLSLN
                     AQQVSGVRANRELPVVWGVAKGSLINKVILVPLALIISAFIPWAITPLLMIGGAFLCF
                     EGVEKVLHMLEARKHKEDPAQSQQRLEKLAAQDSLKFEKDKIKGAIRTDFILSAEIVA
                     ITLGIVAEAPLLNQVLVLSGIALVVTVGVYGLVGVIVKIDDLGYWLAEKSSALMQALG
                     KGLLIIAPWLMKALSIVGTLAMFLVGGGIVVHGIAPLHHAIEHFAGQQSAVVAMILPT
                     VLNLILGFIIGGIVVLGVKAVAKIRGQAH"
     gene            5793..5975
                     /locus_tag="JN001_002310"
     CDS             5793..5975
                     /locus_tag="JN001_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2158 domain-containing protein"
                     /protein_id="HAY9053523.1"
                     /translation="MSFMVSEEVTVKEGGPRMIVTGYSSGMVECRWYDGYGVKREAFH
                     ETELVPGEGSRSAEEV"
     gene            6146..7840
                     /gene="yedQ"
                     /locus_tag="JN001_002311"
                     /pseudo
     CDS             6146..7840
                     /gene="yedQ"
                     /locus_tag="JN001_002311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310721.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis regulator YedQ"
     gene            complement(7837..8652)
                     /locus_tag="JN001_002312"
     CDS             complement(7837..8652)
                     /locus_tag="JN001_002312"
                     /EC_number="3.1.3.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-3-phosphoglycerate phosphatase-related
                     protein"
                     /protein_id="HAY9053524.1"
                     /translation="MFSIQQPLLVFSDLDGTLLDSHSYDWQPAAPWLSRLREANVPVI
                     LCSSKTSAEMLYLQKTLGLQGVPLIAENGAVIQLAEQWQDIDGFPRIISGISHGEISQ
                     VLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQ
                     FTARLNELGLQFMQGARFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPND
                     APLLEVMDYAVIVKGLNREGVHLHDEDPARVWRTQREGPEGWREGLDHFFSAR"
     gene            complement(8950..9166)
                     /gene="yodD"
                     /locus_tag="JN001_002313"
                     /pseudo
     CDS             complement(8950..9166)
                     /gene="yodD"
                     /locus_tag="JN001_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416463.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide/acid resistance protein YodD"
     gene            9275..9517
                     /gene="dsrB"
                     /locus_tag="JN001_002314"
     CDS             9275..9517
                     /gene="dsrB"
                     /locus_tag="JN001_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein DsrB"
                     /protein_id="HAY9053525.1"
                     /translation="MPEKRNCSTLAQSHRRKTMKVNDRVTVKTDGGPRRPGVVLAVEE
                     FSEGTMYLVSLEDYPLGIWFFNEAGHQDGIFVEKAE"
     gene            complement(9561..10184)
                     /gene="rcsA"
                     /locus_tag="JN001_002315"
     CDS             complement(9561..10184)
                     /gene="rcsA"
                     /locus_tag="JN001_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator RcsA"
                     /protein_id="HAY9053526.1"
                     /translation="MSTIIMDLCSYTRLGLTGYLLSRGVKKREINDIETVDDLAIACD
                     SQRPSVVFINEDCFIHDASNSQHIKHIINQHPNTLFIVFMAIANVHFDEYLLVRKNLL
                     ISSKSIKPESLDDILGDILKKETTITSFLNMPTLSLSRTESSMLRMWMAGQGTIQISD
                     QMNIKAKTVSSHKGNIKRKIKTHNKQVIYHVVRLTDNVTNGIFVNMR"
     gene            complement(10469..11254)
                     /gene="fliR"
                     /locus_tag="JN001_002316"
     CDS             complement(10469..11254)
                     /gene="fliR"
                     /locus_tag="JN001_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HAY9053527.1"
                     /translation="MMQVTSDQWLSWLSLYFWPLLRVLALISTAPILSERSVPKRVKL
                     GLAMMITFVIAPSLPANDVPVFSFFALWLAVQQILIGIALGFTMQFAFAAVRTAGEII
                     GLQMGLSFATFVDPASHLNMPVLARIMDMLALLLFLTFNGHLWLISLLVDTFHTLPIG
                     GEPLNSNAFLALTKAGSLIFLNGLMLALPLITLLLTLNLALGLLNRMAPQLSIFVIGF
                     PLTLTVGISLMAALMPLIAPFCEHLFSEMFNLLADIISELPLI"
     gene            complement(11263..11532)
                     /gene="fliQ"
                     /locus_tag="JN001_002317"
     CDS             complement(11263..11532)
                     /gene="fliQ"
                     /locus_tag="JN001_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013365797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FliQ"
                     /protein_id="HAY9053528.1"
                     /translation="MTPESVMMMGTEAMKVALALAAPLLLVALVTGLIISILQAATQI
                     NEMTLSFIPKIIAVFIAIIIAGPWMLNLLLDYVRTLFTNLPYIIG"
     gene            complement(11542..12278)
                     /gene="fliP"
                     /locus_tag="JN001_002318"
                     /pseudo
     CDS             complement(11542..12278)
                     /gene="fliP"
                     /locus_tag="JN001_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310714.1"
                     /note="The bacterial flagellar biogenesis protein FliP
                     forms a type III secretion system (T3SS)-type pore
                     required for flagellar assembly.; frameshifted; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system pore protein
                     FliP"
     gene            complement(12278..12643)
                     /gene="fliO"
                     /locus_tag="JN001_002319"
     CDS             complement(12278..12643)
                     /gene="fliO"
                     /locus_tag="JN001_002319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliO"
                     /protein_id="HAY9053529.1"
                     /translation="MNNHATVQSSTPVSAAPLLQVSGALIAIIALILAAAWQVKRLGF
                     APKRTGVNGLKISASASLGARERVVVVDVEDARLVLGVTAGQINLLHKLPPSAPTEEI
                     PQTDFQSVMKNLLKRSGRS"
     gene            complement(12646..13059)
                     /gene="fliN"
                     /locus_tag="JN001_002320"
     CDS             complement(12646..13059)
                     /gene="fliN"
                     /locus_tag="JN001_002320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HAY9053530.1"
                     /translation="MSDMNNPADDNNGAMDDLWAEALSEQKSTSSKSAADAVFQQFGG
                     GDVSGTLQDIDLIMDIPVKLTVELGRTRMTIKELLRLTQGSVVALDGLAGEPLDILIN
                     GYLIAQGEVVVVADKYGVRITDIITPSERMHRLSR"
     gene            complement(13056..14060)
                     /gene="fliM"
                     /locus_tag="JN001_002321"
     CDS             complement(13056..14060)
                     /gene="fliM"
                     /locus_tag="JN001_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HAY9053531.1"
                     /translation="MGDSILSQAEIDALLNGDSEVKDEPTASVSGESDIRPYDPNTQR
                     RVVRERLQALEIINERFARHFRMGLFNLLRRSPDITVGAIRIQPYHEFARNLPVPTNL
                     NLIHLKPLRGTGLVVFSPSLVFIAVDNLFGGDGRFPTKVEGREFTHTEQRVINRMLKL
                     ALEGYSDAWKAINPLEVEYVRSEMQVKFTNITTSPNDIVVNTPFHVEIGNLTGEFNIC
                     LPFSMIEPLRELLVNPPLENSRNEDQNWRDNLVRQVQHSQLELVANFADISLRLSQIL
                     KLKPGDVLPIEKPDRIIAHVDGVPVLTSQYGTLNGQYALRIEHLINPILNSLNEEQPK
                     "
     gene            complement(14065..14529)
                     /gene="fliL"
                     /locus_tag="JN001_002322"
     CDS             complement(14065..14529)
                     /gene="fliL"
                     /locus_tag="JN001_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body-associated protein FliL"
                     /protein_id="HAY9053532.1"
                     /translation="MTDYAISKKSKRSLWIPILVFITLAACASAGYSYWHSHQVAADD
                     KAQQRVVPSPVFYALNTFTVNLGDADRVLYIGITLRLKDEATRSRLSEYLPEVRSRLL
                     LLFSRQDAAVLATEEGKKNLIAEIKTTLSTPLVAGQPKQDVTDVLYTAFILR"
     gene            complement(14634..15761)
                     /gene="fliK"
                     /locus_tag="JN001_002323"
     CDS             complement(14634..15761)
                     /gene="fliK"
                     /locus_tag="JN001_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook length control protein FliK"
                     /protein_id="HAY9053533.1"
                     /translation="MIRLAPLITADVDTTTLPGGKASDAAQDFLALLSEALAGETTTD
                     KAAPQLLVATDKPTTKGEPLISDILADAQQADLLIPVDETLPVINDEQSTSTPLTTAQ
                     TMTLAAVADQNTTKDEKADDLNEDVTASLSALFAMLPGFDNTPKVTDVPSTVLPAEKP
                     TLFTKLTSAQLTTAQPDDAPGTPAQPLTPLVAEAQSKAEVISTPSPVTAAASPLITPH
                     QTQPLPTVAAPVLSAPLGSHEWQQSLSQHISLFTRQGQQSAELRLHPQDLGEVQISLK
                     VDDNQAQIQMVSPHQHVRAALEAALPVLRTQLAESGIQLGQSNISGESFSGQQQAASQ
                     QQQSQRTVNHEPLAGEDDDTLPVPVSLQGRVTGNSGVDIFA"
     gene            complement(15758..16201)
                     /gene="fliJ"
                     /locus_tag="JN001_002324"
     CDS             complement(15758..16201)
                     /gene="fliJ"
                     /locus_tag="JN001_002324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagella biosynthesis chaperone FliJ"
                     /protein_id="HAY9053534.1"
                     /translation="MAEHGALATLKDLAEKEVEDAARLLGEMRRGCQQAEEQLKMLID
                     YQNEYRNNLNSDMSAGMTSNRWINYQQFIQTLEKAITQHRQQLNQWTQKVDIALNSWR
                     EKKQRLQAWQTLQERLSTAALLAENRLDQKKMDEFAQRAAMRKPE"
     gene            complement(16220..17588)
                     /gene="fliI"
                     /locus_tag="JN001_002325"
                     /pseudo
     CDS             complement(16220..17588)
                     /gene="fliI"
                     /locus_tag="JN001_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416451.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellum-specific ATP synthase FliI"
     gene            complement(17588..>17926)
                     /gene="fliH"
                     /locus_tag="JN001_002326"
     CDS             complement(17588..>17926)
                     /gene="fliH"
                     /locus_tag="JN001_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707825.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HAY9053535.1"
                     /translation="ASRLMQMALEAARQVIGQTPTVDNSALIKQIQQLLQQEPLFSGK
                     PQLRVHPDDLQRVDDMLGATLSLHGWRLRGDPTLHPGGCKVSADEGDLDASVATRWQE
                     LCRLAAPGVV"
BASE COUNT         4397 a         4485 c         4718 g         4326 t
ORIGIN      
        1 caaccatctt gccgtagaaa tcaactttat tgccatcttt attgtaaatt tcagccgcat
       61 ttgctgcgcc agcaactaat aacgccggga ccagcattgc cagaactttt cttttcatta
      121 tgtattccct tgtgattata atcttcatga atatatcaat aagtgccgtt atccaaaaaa
      181 aagcacattt ggatactatt ctatgaagtt catttcattt taagtattac atgcaacaaa
      241 tgtatttaaa aggtttcaaa atgtttctaa tctatttaat ataattcaga gatatgaatt
      301 ataaatattc atgaaaatta taaatgtata tcaatatgtt atgagttgag cggaaacata
      361 gggggtatca atgattgttg cgccaaacgg ctggtgtgat caggcgcaca ttaatgaagg
      421 cataaaaaaa agccggcatc atgccggccc aaaaaatata aacaagacga taaaaggcta
      481 ataacggaag catcatgaca cagaataata aaaaggtata attgtaatca gtgctaatat
      541 attgattaaa tgaattaata aagccgatat caaagataaa taaaatcgct caaaacgatt
      601 tttcctgtat tcactgccgt tgcgcaaaat ttatctattt gttcaaaaaa tgattgagtc
      661 ttgactggct catccaatgt ggaaaaatgt gacttttatc acataatagt actaagtctg
      721 aattttccgg gttatctcaa aatggaatac ggttcgacaa agatggaaga gagactctct
      781 cgcagccctg gcggcaaact ggctttgtgg gctttctata catggtgtgg ctatttcgtc
      841 tgggcaatgg cgcgttacat ctgggtgatg agccggatcc ccgatgcccc cgtgtcggga
      901 tttgaaagcg atttaggctc taccgcggga aagtggttag gggcactggt cggattttta
      961 tttatggctc tggtcggggc attgttaggc agcattgcct ggtacacccg acctcgtccc
     1021 gcacgtagca gacgctatga ataaaaactg ctaaggtggc gactctttgg caacggagcg
     1081 cgtatggact tacaacactg gcaggcacag ttcgaaaact ggttgaaaaa ccatcatcag
     1141 caccaggacg cggcccatga cgtgtgtcat tttcgccgcg tctgggctac ggcacagaag
     1201 ctggcggcag atgacgatgt cgatatgctg gtgattttaa ccgcctgtta ttttcacgat
     1261 attgtgagcc tggcgaaaaa tcatccgcaa aggcagcgtt cttcaatcct ggcggcagaa
     1321 gagacgcgtc gcctgctccg tgaagagttc gagcaatttc cggcggagaa aatcgaggcc
     1381 gtttgtcatg tcattgccgc tcacagtttc agcgcgcaaa tcgccccctt aacaacggaa
     1441 gctaaaatcg tccaggatgc ggatcggctg gaagccctgg gggcgattgg cctggcgcgc
     1501 gtgtttgccg tttcaggggc attgggcgtg gcgctgtttg atggtgaaga tccgttcgca
     1561 cagcatcgcc cgcttgatga taaacgctac gcgctggatc atttccagac taagttgctg
     1621 aagctaccgc aaaccatgca aaccgcaaga ggcaagcagc tggcgcagca caacgcgcat
     1681 tttttagtcg agtttatggc gaagctcagt gccgaactgg cgggggagaa tgaaggtgtc
     1741 gatcacaagg tgatagatgc gttttcaccc gcgggataag cgcgtggccc taaatggctg
     1801 taattatgtt aacctgtcgg ccatctcaga tggccggtta aatctatgca ggaaaatata
     1861 tcagtaaccg attcatacag caccgggaat gccgcacagg caatgctgga gaaactgctg
     1921 caaatttatg atgttaaaac gctggtggcg cagcttaatg gtgtgggtga gaatcactgg
     1981 agcgcggcaa ttttaaaacg tgcgctggcg aatgactcgg catggcaccg tttaagtgag
     2041 aaagagttcg cccatctgca aacgttgtta cccaaaccac cggcacatca tccgcattat
     2101 gcgtttcgct ttatcgatct atttgccgga attggcggca tccgtcgcgg ttttgaatcg
     2161 attggcggac aatgcgtgtt taccagcgaa tggaacaaac atgcggtacg cacttataaa
     2221 gccaaccatt attgcgatcc ggcgacgcat cattttaatg aagatatccg cgatatcacc
     2281 ctcagccata aagaaggcgt gagtgatgag gcggcggcgg aacatattcg tcaacacatt
     2341 cctgaacacg atgttttact ggccggtttc ccttgtcagc cattttcgct ggctggcgta
     2401 tcgaaaaaga actcgctcgg gcgggcgcac ggttttgcct gcgataccca gggcacgctg
     2461 ttttttgatg tggtacgcat tatcgacgcg cgtcgtccgg cgatgtttgt gctcgaaaac
     2521 gtcaaaaacc tgaaaagtca cgaccagggt aaaacgttcc gcatcatcat gcagacgctg
     2581 gacgaactgg gctatgacgt ggctgatgca gaagataacg ggccggacga tccgaaaatc
     2641 atcgatggta aacattttct gccgcagcac cgtgaacgca tcgtgctggt gggttttcgt
     2701 cgcgatctta atctgaaagc cgattttact ctgcgtgata tcagcgaatg tttccctgca
     2761 cagcgagtga cgctggcgca gctgttggac ccgatggtcg aggcgaaata tatcctgacg
     2821 ccggtgctgt ggaagtacct ctatcgatat gcgaaaaaac atcaggcgcg cggtaacggc
     2881 ttcggttatg gaatggttta tccgaacaat ccgcaaagcg tcacgcgtac gctgtctgcg
     2941 cgttattaca aagatggcgc ggaaatttta atcgatcgcg gctgggatat ggccaaaggt
     3001 gagaaagact ttgacgatcc gctgaatcag caacatcgtc cacgtcggtt aacgcctcgg
     3061 gaatgcgcgc gcttaatggg ttttgaagcg ccgggagaag cgaaattccg cattccggtt
     3121 tcggacactc aggcctatcg ccagttcggt aactcggtgg tcgtgccggt ctttgccgcg
     3181 gtggcaaaac tgcttgagcc aaaaatcaaa caggcggtgg cgttgcgtca gcaagaggca
     3241 caacatggcc gacgttcacg ataaggccac tcgcagcaaa aatatgcgcg cgattgccac
     3301 gcgtgatacg gcgattgaga agcgcctcgc cagtctgtta accgggcagg gcctggcgtt
     3361 tcgcgttcag gacgccagtc tgcccggaag cccggatttt gtcgttgatg aatatcgctg
     3421 cgtgatattt acccatggct gcttctggca tcatcatcac tgctatctgt ttaaagtgcc
     3481 tgcgactcga accgagttct ggctggagaa gataggtaaa aatgttgaac gcgatcgccg
     3541 cgatatcagt cgtttgcagg aactcggctg gcgcgtactg attgtctggg agtgtgcatt
     3601 acgtgggcgc gagaagctga cggatgaagc gcttaccgag cgtctggaag agtggatctg
     3661 cggcgaaggt gccagcgcgc agatcgacac gcaggggatt catttactcg cttgatgcgt
     3721 cctgaataac tggcgcaact acgggttttg ccgggaagag atattttccc aacgtgacca
     3781 gtaccaccgc gaagacaatt acgccgagcg ccagccattc aatcttcgac agcgtctctc
     3841 cgcccagtcc cgtacccagc aagaccgcga ccaccgggtt aacgtaggcg tagctggtgg
     3901 cgagagccgg actgacatta cggattaaat acatataagc gttgatggcg ataatcgaac
     3961 caaacagcgc cagatagccg accgcaagga agcctgaaag ggaagggagc gccgtcagtt
     4021 tttcacctgc aatcatcgac gcgatcatta acaccacgcc tgccgccagc atctcaatcg
     4081 cacccgccat catccctaca ggtaaggtaa tgcgcgagcc ataaaccgag ccaaacgccc
     4141 agctaatcga gccgattaaa atcagaatcg cgccccacgg attgccgctt aaatttccac
     4201 cgctattgag catgatgatt ccggcaagcc caatggcgat acccacccat tccaatttgc
     4261 gcgttttaat gccaaacagg cggctgaagc acagggtaaa gaggggcacg gttgcaacca
     4321 caacggcggc gatgccggaa ggaacatttt gatgctcggc aaccgtcacc atgccattac
     4381 cgacagccag caataacagg ccaatcagcg cggcattgag cagcggacgt agcgggggga
     4441 gcttgtgtcc gcgcagtagc aaaaatgcca tcaataaaat accggctgcc aggaatcgaa
     4501 cgcctgccat cattaacgga ggccagcttt ccacgccaat ccgaatgaca aaataggttg
     4561 agccccaaat gatatacaac gcaaacagcg cgccaaaaag cggtaacaac tggcggaaac
     4621 gcataatccc tcacggtgga aataaaaagg tggttcatag taaacgtgaa aatcattctg
     4681 ctggcgagag atataattgc atttgattgt taaaaaaatg ttgacctgtg aagcaagtat
     4741 cagagctgcc gtttttgctt catacttaca cccttcaaca ataaaaatga gagggaatgc
     4801 ttttggccgg gagtagttta ctgacgttgc tcgatgatat cgccacacta ctggacgata
     4861 tctccgtgat gggcaaactg gcggcgaaga aaaccgccgg tgtattaggg gatgacttat
     4921 cgctcaatgc gcaacaagtt tcaggcgtgc gggccaaccg ggaacttccc gtggtctggg
     4981 gcgtggcgaa aggatcgctg attaataaag tgattctggt gccgctggcg ctgatcatca
     5041 gtgcgtttat cccgtgggcg attacgcctc tgttgatgat tggtggcgcg tttctctgct
     5101 ttgaaggagt agagaaagtg ctgcatatgc tggaggcgcg taaacataaa gaagatccgg
     5161 cgcagagcca gcagcgtctg gagaagctgg cggcgcagga ttcgctgaag tttgaaaagg
     5221 acaaaataaa aggggcgatt cgtaccgatt ttatattgtc tgccgaaatc gtcgccatca
     5281 cgctggggat tgtggccgaa gcgccgttgc ttaatcaggt gctggtgctt tcaggcatcg
     5341 cgctggtagt gaccgtgggc gtctacggtc tggtaggggt tatcgttaag attgatgacc
     5401 tggggtattg gctggcggaa aaatccagcg cgctgatgca ggcattaggt aaagggttat
     5461 tgatcattgc gccctggctg atgaaagcgt tatcgattgt cggcacgctg gcgatgttcc
     5521 tcgtcggcgg cgggattgtg gtacatggta ttgcgccgct gcatcacgcc attgaacatt
     5581 tcgctgggca gcaaagtgca gtggtggcga tgatattacc gactgtttta aatctgattc
     5641 ttggatttat catcggcggc atcgtggtgc tgggagtgaa agccgtagcg aaaatacgcg
     5701 gtcaggcaca ttaatactcg cacaggctat tatgcaaaat tcgccatctt caactaaggt
     5761 gaacaagttt cactcgaaaa aaggaggcga gtatgagctt tatggttagt gaggaagtta
     5821 cggttaaaga gggcggcccg cggatgattg tcaccggata ctccagcggt atggttgagt
     5881 gtcgttggta tgacggttac ggggtcaagc gggaagcttt tcatgaaacc gagcttgttc
     5941 cgggggaggg gagtcgttct gcggaagaag tttgaaaggg tatcattaac accaggccgg
     6001 atcacttccg gcctggtgtg ccaatgcctg caatgaatga tagtcgcgtc ttatcatgcc
     6061 accattataa aattatcgct gttttgcggt acgctatcgc caggttatgc cagaatcata
     6121 aaaaagcagg ttgggagtcg tcagggtgca gcacgagaca aaaatggaaa accagagctg
     6181 gttgaaaaaa atcgcacgcc gcctggggcc tggtcatgtc gttaatctct gctttatcgt
     6241 ggtattgctt ttttccacct tgctgacctg gcgtgaagtg gtagtgctgg aagatgccta
     6301 tatctccagt cagcgtaatc atctggaaaa cgtagccaac gcgctcgata agcatttgca
     6361 gtataacgtc gacaaactga tctttttgcg taatggcatg cgcgaagctc tcgtagcgcc
     6421 actggatttc acttcactgc gtaatgctgt aaccgagttc gaacagcatc gcgacgagca
     6481 cgcctggcaa attgaactca accgacgacg caccctgtca gtcaatggcg tatcggatgc
     6541 attagtcagc gaggggaatc tcctgtctcg cgaaaatgaa agcctcgaca atgaaattac
     6601 cgctgcactg gaagttggtt acttgctgcg actggcgcac aacacctcgt cgatggttga
     6661 acaggcgatg tatgtctcgc gtgccggatt ttacgtttcg acgcagccga ccttgtttac
     6721 gcgcaatgta ccaacgcgtt attacggcta tgtcacccaa ccctggttta tcggccattc
     6781 gcaatgagaa aatcgtcacc gcgcggtacg ctggtttact tcgcaaccgg aacacgccag
     6841 caatactgaa ccgcaggtta ccgtcagtgt tccggtagac agtaataact actggtatgg
     6901 cgtgctgggg atgagtattc ccgtgcgtac catgcagcaa tttttaagaa acgccatcga
     6961 taaaaacctc gatggtgagt atcagctcta tgacagtaag ctgagatttt tgacctcttc
     7021 caatcctgac catccaacag ggaatatttt tgatcctcgt gaactggcct tgctggcgca
     7081 ggcgatggaa catgacacgc ggggcggcat tcgtatggac agtcgctatg ttagctggga
     7141 acgtctggac catttcgacg gtgtgctggt gcgcgtccat acgctaagcg aaggcgtgcg
     7201 cggcgatttc ggcagtatca gcattgcatt aaccctgctg tgggcgctct ttaccaccat
     7261 gttactcatc tcctggtatg tgattcgccg gatggttagc aacatgtatg ttctgcaaag
     7321 ctcgttgcag tggcaggcgt ggcacgacac cttaacccgt ttatataatc gtggcgcact
     7381 gtttgaaaaa gctcgtccgc tcgcgaaatt gtgtcagacg caccaacatc ctttttctgt
     7441 cattcaggtc gaccttgacc attttaaagc gattaatgac cgctttagtc atcaggcggg
     7501 cgaccgtgtt ctttctcatg ctgccggatt aattagcagt tccttgcgtg cgcaggacgt
     7561 tgccgggcgg gtcggtggtg aggagttttg tgtgattctg ccaggcgcga gtctgacgga
     7621 ggctgcggaa gtcgcagaac gtattcgcct gaagttaaat gaaaaagaga tgttgattgc
     7681 taagagtacg acgatacgca tcagtgcctc gttgggggga agtagcagcg aggaagccgg
     7741 tgattatgat tttgaacaac tccagtcact ggctgaccgt cggctttatc tcgctaaaca
     7801 ggccgggcgt aatcgggtat gcgcgagcga taacgcttaa cgagcggaga aaaaatggtc
     7861 cagcccttca cgccatcctt ccggtccttc acgctgcgtt cgccagacgc gggccggatc
     7921 ctcatcatgc agatgcaccc cttcacggtt tagccctttc acaatcaccg cgtaatccat
     7981 tacctccagt aagggcgcat cgtttggccc atcgcccagg ccaagtgtgg ttgggcgttt
     8041 gcctgataat tgttgatagg tcgcgataat ccagttggcg gcctgatctt ttccggcaga
     8101 ggcatccagg acgtgccaga agcgcgcacc ctgcataaac tgtaagccca gttcgttcag
     8161 acgagcggta aattgtgcca tacgctcgtc actgtcgcgc cagattagcg ttaccgacgc
     8221 ctcatgcagc tgcgtcagcg ccgcctggct acggcttaat cccgtccatt cggcgatggt
     8281 tgcatcgtcg acatcatcga aagtcgtgaa tttaaaatgt tctttctcgc gtagcgtatt
     8341 taaaacctgg ctgatttcgc catggctaat acctgagatg atgcgtggaa aaccgtctat
     8401 atcctgccat tgttcagcaa gctggatcac tgcgccattt tcggcaatca gtggtacccc
     8461 ttgtaacccc aacgtttttt gcaagtacag catttccgct gaagttttac tgctacagag
     8521 aatgacggga acattcgctt cgcgtaaacg gctgagccag ggggcagccg gttgccagtc
     8581 ataactatga ctgtccagca gggtgccatc aagatcgcta aaaaccagta gtggttgttg
     8641 aattgaaaac atggtcgcgc agttctcccc ttaccaggat gattctcaaa acagcacaaa
     8701 taatcaaaga tgattttttc gggagcgatc ccgttgacgc cagagccacc aaggggtgac
     8761 gcacgtcaca tttctattca taagtagcgt taatcattca tatcgcgaat attttcttgt
     8821 cagcgaaaaa aattgcggat aaggtgatga acacatcaga tttcctggtg taacgaattt
     8881 tttaagtgct tcttgcttaa gcaagtttca tcccgacccc ctcagggtcg ggattttttt
     8941 attgtgcatt caacgattca cttcagagac gctgaagtca tgaatatcca gttcgaaggc
     9001 atccgccaat tcacgccatg tatgatattc acgtccatcg acgctaacgt gttcagaatc
     9061 gttctggctg cgatgaactt atttcattga tcgccgccag cagggcatcg acatcgacgc
     9121 tgacctcacg ttttgcggta tcgctgtact cttttgcggt tttcatcatc tttcctcgca
     9181 accgttactc tgttgttgcc gccagtcgtt aagtccgcct ggcatctctt aagtatagac
     9241 cgtcgagaaa atcagcactc gcgcgcgcct ggcgctgcca gaaaaacgaa attgttctac
     9301 actggcacaa agccacagga ggaaaacgat gaaggtgaat gatcgggtaa cagtcaaaac
     9361 ggatggcggt ccgcgtcgtc ctggcgtggt actagcagtt gaggagttta gtgaaggcac
     9421 aatgtacctg gtttcgctgg aagactaccc gctcggcatc tggttcttta atgaagcagg
     9481 gcatcaggac ggtatctttg tggagaaagc agagtaatct tattcagcct gactggtggg
     9541 aaaccaccag tcagaatgtg ttagcgcatg ttgacaaaaa taccattagt cacattatcc
     9601 gtcagtcgga cgacatggta gataacctgt ttattatgcg ttttgatctt acgtttaata
     9661 ttacctttat gcgatgaaac ggtcttggct ttgatattca tttggtcaga gatttgaatg
     9721 gttccctgac ctgccatcca cattcgcaac atactcgatt cggttcggct caatgataac
     9781 gtcggcatat ttaaaaaaga ggttatcgtt gtctcttttt tcagaatatc gccaaggata
     9841 tcgtcgagag attccggttt aatcgattta gaacttatca ataaattttt tctgaccaat
     9901 agatattcat caaaatgaac attggcaatt gccataaaaa cgataaataa cgtattggga
     9961 tgttgattaa tgatgtgctt gatgtgctga ctgttagaag catcatggat gaaacagtcc
    10021 tcattaataa acaccactga agggcgctgt gaatcacaag ctatggcaag gtcatcaacg
    10081 gtttcaatgt cgttgatttc tcttttttta acccctctac tcaacagata cccggttaaa
    10141 cctagtcggg tgtaactaca taaatccata ataatcgttg acatggcata ccctcactca
    10201 atgcgtaacg ataattcccc ttacctgaat atttcatcat gactaaacgg aacaacatgg
    10261 gtcacctaat gcgccactct cgcgattttt caggcggact tactatcccg taaagtgttg
    10321 tataatttgc ctggaattgt cttaaagtaa atgttgcgat atgtgagtga gcttaaaaca
    10381 aatatttcgc cgcaggagta tcctggaaga tgttcgtagg tattattttt cggataatcc
    10441 ttaggataac atgataaacg ttacggaatt atattaatgg caattcacta ataatatcag
    10501 ccagcaaatt aaacatctca ctgaataaat gttcgcaaaa aggtgcaatt aacggcatta
    10561 atgccgccat taaagagata ccgacagtca gagttaatgg aaatccaata acaaaaatgg
    10621 ataattgcgg ggccatacga ttcagtaaac ctaatgccag attcagggtc agcagcagag
    10681 taatgagcgg taacgccagc atcagcccgt taaggaaaat caaactcccc gctttggtga
    10741 gtgccagaaa cgcattgctg ttcaacggtt cgccaccaat tggcagggtg tgaaaggtat
    10801 cgaccagcag tgaaatcaac cataaatgac cgttaaatgt caggaacagc agtaacgcca
    10861 gcatatccat gatacgcgct aaaacgggca tattgagatg gctggccgga tcgacaaacg
    10921 tcgcaaatga cagccccatt tgcagaccga taatttcgcc agcggttcgc acagcggcaa
    10981 aggcaaattg catggtaaaa ccaagcgcaa tgccgatcag gatctgctgc acggccagcc
    11041 acagagcaaa gaacgaaaaa acaggaacat cgttggcagg taatgatggg gcaatgacga
    11101 acgtgatcat cattgccagc cccagtttta cccgtttcgg cacgctgcgt tcgctcagaa
    11161 ttggtgcggt agaaatgagc gccagcacgc gcagtaacgg ccagaagtac aggcttaacc
    11221 aggaaagcca ttgatcgctt gtcacctgca tcattgtacg gcctacccga tgatatacgg
    11281 caggttagtg aacaaggtgc ggacgtaatc cagcaacaga ttgagcatcc acggtccggc
    11341 aataataatg gcaataaata cggcgatgat ttttggaata aacgacagcg tcatttcgtt
    11401 gatctgcgtg gcggcctgca aaatactgat gataaggccc gtgaccagcg ccaccagcaa
    11461 cagcggggca gccagtgcca gcgcgacttt catcgcttca gtccccatca tcatgaccga
    11521 ttcaggtgtc attttgcctc tctagctgta aaagctctgc gccagcgaac cgaccagcaa
    11581 ttgccagcca tccaccagta caaacagcat cagtttaaag ggcagagcaa tggtggcggg
    11641 gggaccatca tcatccccaa tgccatcaac acgctggcaa tcaccaggtc gataatcaaa
    11701 aaaggaatga aaatcgtgaa gcctatctga aatgcggttt tcaactcgct ggtcacgtag
    11761 gccgggcgca aaatgcgcat cggcacggct tcaggtccct gcaacgggcc ggtattcgct
    11821 agtctggcaa acaaccctaa atctgcctca cgggtctgac gcagcataaa ctcacgtagc
    11881 ggctgcgccc ctttttccag cgcctcctgc attgatattt tctcttcgct gaatggctgg
    11941 tacgcatcga cataaatttt gtcgatcacc ggtgacataa taaaaaaggt caaaaatagt
    12001 gccagcccca gcaatacctg gttaggtggc gcggagggcg ttcccagcgc gttacgcaat
    12061 aaaccaaaaa caatgatgat gcgggtgaaa ctggtcatca tcagtaaaat tgccggaata
    12121 aacgtcaacg aggtgatgaa caccagcgtc tgcaccggga gcgaccagct ttgtccaccg
    12181 ccaggcagcg gctggctggt gatacccggc agttgcgcga aggcgagggg cgtaaccagc
    12241 cagagaagga caggtgcgac agacaacaaa cgacgcatca ggatctccca ctacgcttaa
    12301 gcaaattttt catgaccgac tgaaaatcgg tctgcggtat ctcttctgtt ggtgctgaag
    12361 ggggaagttt atgcagcaga ttgatttgcc ctgcggtaac gccgagcacc agccgtgcat
    12421 cttccacatc gaccaccaca acccgttcac gcgcgcccag cgaagcactg gcgctaattt
    12481 tcagaccgtt aacgccagtg cgtttcgggg caaatcccaa ccgttttacc tgccaggcag
    12541 cagcgaggat cagggcaata atggcgatga gtgcgccgct gacctgcagc agtggcgcag
    12601 cagaaaccgg cgtggaagat tgcacagtag cgtggttatt catcactaac ggctcaggcg
    12661 atgcattcgc tcagacggag taatgatatc ggtgatccgc acgccatatt tatcggcaac
    12721 gaccaccact tcgccctggg cgattaaata accgttgatc agaatatcca gtggttcgcc
    12781 cgccagaccg tccagcgcca cgacggaccc ttgcgtcaga cgcaacagct ctttgatggt
    12841 catccgcgta cggcccagct cgacggtcag cttgaccgga atatccatta tcaggtcgat
    12901 atcctgcaac gttccgctga catcaccacc gccaaattgc tggaacaccg cgtcggcagc
    12961 gcttttgctg ctggttgatt tttgttcgct caacgcttca gcccacagat cgtccattgc
    13021 gccgttgttg tcatcggccg gattattcat gtcactcatt tgggctgttc ctcgttcaga
    13081 gaatttaaaa tcgggttaat caaatgttct atccgtaacg catactgacc gttgagagtg
    13141 ccgtactgac tggtcagcac cgggacgccg tcaacatggg cgatgatgcg atcaggtttt
    13201 tctatcggca ggacgtcgcc gggtttcagt tttaaaatct gcgacaggcg tagcgagata
    13261 tcggcaaagt tggcgaccag ctccagctgt gaatgctgca cctggcgcac caggttatcg
    13321 cgccagttct gatcttcatt acgcgagttt tccagcggcg ggttaaccaa caattcccgt
    13381 agcggctcga tcatgctgaa tggcagacag atattaaatt cgccggtcag gttgccaatc
    13441 tccacatgga acggcgtgtt aaccacaatg tcgttcggcg aggtggtgat attggtaaat
    13501 ttcacctgca tttccgaacg cacgtactca acttccagcg gattaatcgc cttccaggcg
    13561 tcgctatagc cttcaagcgc cagctttaac atgcggttga tgacgcgctg ttcggtatgg
    13621 gtaaactcgc gaccttccac tttggtcggg aagcgtccat cgccgccaaa caggttatcc
    13681 acggcgataa acaccagact cggtgaaaac accaccagcc ctgtgccgcg cagcggtttc
    13741 agatggataa ggttcaggtt ggtcggcacc ggcaggttgc gggcaaattc atggtacggc
    13801 tgaatgcgga tggccccgac ggttatatcc gggctacgac gcagcaggtt gaacagcccc
    13861 atacgaaaat ggcgggcaaa gcgctcatta atgatttcca gcgcctgcaa acgttcgcgc
    13921 acaacccgtc gttgggtatt cggatcgtac ggacgaatgt cactttcgcc gctaacactg
    13981 gctgtcggtt cgtctttgac ttcgctgtca ccattcaaca gcgcatcaat ttcagcttga
    14041 gaaagaatac tatcgcccat gtcgttatcg cagaataaaa gcggtataca gcacgtcggt
    14101 gacatcctgt ttcggttgcc cggcaacaag cggggtggaa agcgtggttt taatctcggc
    14161 aatcaggttt ttcttgcctt cttctgtcgc cagtacggca gcatcctgac gcgaaaacag
    14221 taacagcaaa cggctacgga cttccggcaa atactcactc agccgcgagc gggtagcttc
    14281 atctttcagg cgcagggtta tgccgatata aagcacgcga tccgcatcgc ccaaattgac
    14341 cgtgaaggta ttcagcgcgt agaagaccgg ggagggtacg acgcgttgct gcgctttgtc
    14401 gtcagcggca acctgatgcg aatgccagta gctgtaacct gcgctggcac aggccgcgag
    14461 ggtaatgaat accagaatcg ggatccaaag cgatcgcttg cttttcttgc ttatcgcgta
    14521 atcagtcatg tgttgcggtc ttcctgtgtc gctactgctt atcggctaat tatcctgcgt
    14581 tttgagcgca acaaagcggg gaaaagacgc ggattacggt gctacctctg acgttaggcg
    14641 aaaatatcaa cgccgctgtt gcctgttaca cgcccttgta aagagacggg aaccggaagc
    14701 gtatcgtcgt cttcccccgc cagaggttca tggtttactg tgcgttggct ttgctgttgt
    14761 tgggaagcgg cctgctgctg accactaaag ctttcgccac tgatgttgct ttgccctaac
    14821 tgaatgccac tttcggccag ctgcgtacgc agtaccggaa gcgctgcttc cagcgcggcg
    14881 cgtacatgct gatgcggtga aaccatctgg atttgcgcct ggttatcatc cactttgagg
    14941 gagatttgca cttcacctaa atcctgcggg tgcagacgca actctgcact ttgttgcccc
    15001 tggcgggtga acagcgaaat atgctggctt aatgattgtt gccattcgtg agaacccagc
    15061 ggtgcactca aaacaggcgc ggcgacggtg ggcagtggct gtgtctggtg tggagtaatt
    15121 agcgggctgg cggcagcggt caccggtgac ggtgtgctga tgacttccgc tttactctgg
    15181 gcttctgcta ccagcggtgt taatggctga gctggcgtgc cgggggcatc atcaggctgt
    15241 gctgttgtga gttgcgcaga agtcagtttt gtgaagagcg ttggtttctc tgccggtaac
    15301 acggttgacg gcacatcagt cactttgggc gtattgtcaa aacccggcaa catcgcaaaa
    15361 agggcgctca ggcttgcggt gacgtcttca ttcagatcat ccgctttttc gtcttttgtc
    15421 gtattttggt cagccaccgc agccaacgtc atcgtctgag cggtggttaa cggtgttgat
    15481 gtggattgtt cgtcgttgat gacaggcagt gtttcatcca cggggatcag taaatccgct
    15541 tgttgcgcgt cggcaagaat atcgctgatc agcggctcgc cttttgtcgt gggcttatct
    15601 gttgccacca gcaactgggg ggccgctttg tcggtagttg tctcgcctgc taatgcttcg
    15661 ctcaacaacg cgagaaaatc ttgtgcagca tcgctggctt tgccgccagg caatgtggtg
    15721 gtgtcaacgt cggcggtaat taagggcgct aagcgaatca ttcaggtttc ctcatggcgg
    15781 cgcgctgggc gaactcatcc atctttttct gatcgaggcg gttttctgca agcagtgccg
    15841 ccgtggatag ccgttcctgc agtgtctgcc aggcctgcaa acgttgtttc ttttctcgcc
    15901 agctgttcag ggcaatgtca actttctgcg tccactgatt aagttgctgg cgatgctgag
    15961 taatggcttt ttccagcgtc tggataaact gctgatagtt gatccagcgg ttgctggtca
    16021 tcccggcact catatcgctg ttgaggttat tgcgatattc attctgataa tcgatcagca
    16081 ttttgagctg ttcttccgcc tgctgacacc cgcgacgcat ttcacccagc aggcgcgcgg
    16141 catcctctac ctctttttct gccagatctt tcagggtcgc cagcgcgcca tgttctgcca
    16201 tctgccgtta tctcctgggt tatgacactg tcgggaaaat acgctccagc ccctggagag
    16261 acgcttccca gtccgcgcgt tcaaaaatgc cttgttgcaa atagccctcc agctgcggcc
    16321 acagggcgat ggctttgtcg agcatcggat cgctgccttt ggcatacgcg ccgacgctaa
    16381 ccagatcgcg gttacgctga aaactcgaca acagctgttt gaaggtgcgc actcgcgcgt
    16441 aatgttgctc actgatcaac gccgtcattg cgcggctgat cgacgcttca atatcgatag
    16501 ccggatagtg cccggcttcc gccagtcggc gagacagcac aatgtgaccg tcgaggattg
    16561 cccgcgcaga gtcggcaatg gggtcctgct ggtcatcgcc ttcagtgagc acggtataaa
    16621 acgcggtaat cgatccgccg ccgctaatgc catttccggc acgctcgacc agtgccggta
    16681 atttggcaaa caccgacggg ggataacctt tagtggcggg tggttcgcca atcgccagcg
    16741 caatttcacg ctgggccatc gcgtagcggg tgagggagtc cataatcagc aacacatgct
    16801 gaccacgatc gcgaaaatct tcggcaatgc gcgtggcata ggcggcaccc tgcattcgca
    16861 ggagaggaga aacatccgcc ggagcggcaa tcaccacgga gcgtgcacgc ccttcggcac
    16921 cgaggatatt ctcaataaaa tcttttactt cgcgtccgcg ttcaccaatc aaacccacga
    16981 caatgacatc ggcgcgggtg taacgtgcca tcatccccag cagcacactt ttaccaacgc
    17041 cggacccggc aaacagcccc atacgctgcc cacgcccaac ggtaagcagg gcattgattg
    17101 ggcgcacgcc ggtgtccagc acatgttcaa tcggtgtacg ttgcaacggg ttaaatggcg
    17161 gggtaatcag cgcaccggtt tccgtcgtat cgggggaggc catcgagcgg tttaccgctg
    17221 ccgtccagaa cacgacctaa taacgccgga ccgagcggta actgtttgcc gctttgcagc
    17281 ccttctgccg aaatgttttt ggcataaaca cgcgcgccgg gcaggacacc ttcgacttcc
    17341 tccagcggca ttaaaaacag ccgttgaccg ttaaagccaa cgacttcact ttctacttcg
    17401 tgcgtttcag tgccgttctg gcgctcaatc acacaggttg cgccgagcgg caattgtaat
    17461 ccggtggctt ccagcaccag cccggtagcg cgggttaatc gcccgtagcg acgtaccgca
    17521 ggcaactgcg ccattttggc ttcaaagtta tccagcgtgg ttagccagcg agtcaggcgc
    17581 gtggtcatta caccactcct ggtgctgcca gacggcagag ttcttgccag cgagtggcga
    17641 cactggcgtc gagatcgcct tcatcggcgg agactttaca gccgccagga tggagggtgg
    17701 gatcgccccg caagcgccag ccatgcaaac ttaaggtagc gccgagcata tcatccacac
    17761 gttgcagatc atccgggtgc acgcgcagct gtggtttacc gctgaataac ggttcttgct
    17821 gcaacaactg ttggatctgt ttgatgagtg ccgagttatc cactgttggc gtctgaccga
    17881 tgacctgacg tgctgcctcc agcgccatct gcatcaggcg cgaagc
//
LOCUS       DADMJE010000076        17868 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.077, whole genome shotgun sequence.
ACCESSION   DADMJE010000076 DADMJE010000000
VERSION     DADMJE010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17868
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.077"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..679
                     /gene="csgG"
                     /locus_tag="JN001_002327"
                     /pseudo
     CDS             1..679
                     /gene="csgG"
                     /locus_tag="JN001_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309441.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="curli production assembly/transport protein
                     CsgG"
     gene            complement(743..1234)
                     /locus_tag="JN001_002328"
     CDS             complement(743..1234)
                     /locus_tag="JN001_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415554.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1097 domain-containing protein"
                     /protein_id="HAY9053536.1"
                     /translation="MNILLSIAITTGILSGIWGWVAVSLGLLSWAGFLGCTAYFACPQ
                     GGLKGLAISAATLLSGVVWAMVIIYGSALAPHLEILGYVITGIVAFLMCIQAKQLLLS
                     FVPGTFIGACATFAGQGDWKLVLPSLALGLVFGYAMKNSGLWLAARSAKTAHREQEIK
                     NKA"
     gene            complement(1336..1890)
                     /locus_tag="JN001_002329"
     CDS             complement(1336..1890)
                     /locus_tag="JN001_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone"
                     /protein_id="HAY9053537.1"
                     /translation="MNEFSILCRVLGSLYYRQPQDPLLVPLFTLIREGKLAANWPLEQ
                     DELLTRLQKSCDMAQVSADYNALFIGDECAVPPYRSAWVEDATEAEVRAFLSERGMPL
                     ADTPADHIGTLLLAASWMEDQSTEDESEALETLFSEYLLPWCGAFLGKVEAHATTPFW
                     RTMAPLTRDAISAMWDELEEDSEE"
     gene            complement(1914..2651)
                     /locus_tag="JN001_002330"
     CDS             complement(1914..2651)
                     /locus_tag="JN001_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase"
                     /protein_id="HAY9053538.1"
                     /translation="MYPVDLHMHTVASTHAYSTLSDYIAQAKQKGIKLFAITDHGPDM
                     EDAPHHWHFINMRIWPRVVDGVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIAGFHE
                     PVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNS
                     SFLHSRKGSEDNCRAVAAAVRDAGGWVALGSDSHTAFTMGEFEECLKILDAVDFPPER
                     ILNVSPRRLLNFLESRGMAPIAEFADL"
     gene            complement(2706..3644)
                     /gene="ghrA"
                     /locus_tag="JN001_002331"
     CDS             complement(2706..3644)
                     /gene="ghrA"
                     /locus_tag="JN001_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415551.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrA"
                     /protein_id="HAY9053539.1"
                     /translation="MDIIFYHPTFDTQWWIEALRKAIPQARVRAWKSGDNDSADYALV
                     WHPPVEMLAGRDLKAVFALGAGVDSILSKLQAHPEMLNPSVPLFRLEDTGMGEQMQEY
                     AVSQVLHWFRRFDDYRIQQNSSHWQPLPEYHWEDFTIGILGAGVLGSKVAQSLQTWRF
                     PLRCWSRTRKSWPGVQSFAGREELSAFLSQCRVLINLLPNTPETVGIINQQLLEKLPD
                     GAYLLNLARGVHVVEDDLLAALDSGKVKGAMLDVFNREPLPPESPLWQHPRVTITPHV
                     AAITRPAEAVEYISRTIAQLEKGERVCGQVDRARGY"
     gene            3878..3965
                     /locus_tag="JN001_002332"
     tRNA            3878..3965
                     /locus_tag="JN001_002332"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3912..3914,aa:Ser,seq:gga)
     gene            4010..4146
                     /locus_tag="JN001_002333"
     ncRNA           4010..4146
                     /ncRNA_class="other"
                     /locus_tag="JN001_002333"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
     gene            complement(4237..4692)
                     /locus_tag="JN001_002334"
     CDS             complement(4237..4692)
                     /locus_tag="JN001_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY9053540.1"
                     /translation="MVAEGILLERKEWLITRCEKMYFDNLEKWFGHYCHIHCQVSLGR
                     LINFPEQPEFSEEERKRFFAIYNGMAMDYVLVSKKNNKIVCVIELDDPSHERADRIIR
                     DRWLDTIMTLARVPFVRASVTKLEEIPPVWETRDKIRPLVAATKSEPVH"
     gene            complement(5504..6568)
                     /gene="phoH"
                     /locus_tag="JN001_002335"
     CDS             complement(5504..6568)
                     /gene="phoH"
                     /locus_tag="JN001_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate starvation-inducible protein PhoH"
                     /protein_id="HAY9053541.1"
                     /translation="MVTSCTGHVLDNQRATTRGVFSSGSHLVTLHFQPHPFFSCVTDA
                     VNGARSRFSAFYPKANYGLQGSQPSDVRAHNRAANGACDEYKQLKVLSMGRQKAVIKA
                     RREAKRVLRRDSRSHKQREEESVTSLVQMSGVEAIGMARDSRDTSPILARNEAQLHYL
                     KAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVTRPVLQADEDLGFLPGD
                     IAEKFAPYFRPVYDVLVRRLGASFMQYCLRPEIGKVEIAPFAYMRGRTFENAVVILDE
                     AQNVTAAQMKMFLTRLGENVTVIVNGDITQCDLPRGVCSGLSDALERFEEDEMVGIVR
                     FGKEDCVRSALCQRTLHAYS"
     gene            complement(6914..8185)
                     /gene="efeB"
                     /locus_tag="JN001_002336"
     CDS             complement(6914..8185)
                     /gene="efeB"
                     /locus_tag="JN001_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deferrochelatase/peroxidase EfeB"
                     /protein_id="HAY9053542.1"
                     /translation="MQYKDENGVNEPSRRRLLKVIGALALAGSCPVAHAQKTQSAPGT
                     LSPDARNEKQPFYGEHQAGILTPQQAAMMLVAFDVLASDKADLERLFRLLTQRFAFLT
                     QGGAAPETPNPRLPPLDSGILGGYIAPDNLTITLSVGHSLFDERFGLAPQMPKKLQKM
                     TRFPNDSLDAALCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGFISDHA
                     ARSKGKETPINLLGFKDGTANPDSQNDKLMQKVVWVTADQQEPAWTIGGSYQAVRLIQ
                     FRVEFWDRTPLKEQQTIFGRDKQTGAPLGMQHEHDVPDYASDPEGKVIALDSHIRLAN
                     PRTAESESSLMLRRGYSYSLGVTNSGQLDMGLLFVCYQHDLEKGFLTVQKRLNGEALE
                     EYVKPIGGGYFFSLPGVKDANDYLGSALLRV"
     gene            complement(8191..9318)
                     /locus_tag="JN001_002337"
     CDS             complement(8191..9318)
                     /locus_tag="JN001_002337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron uptake system protein EfeO"
                     /protein_id="HAY9053543.1"
                     /translation="MTINFCRNALQLSVAALFSSAFMANAADVPQVKVTVTDKQCEPM
                     TITVNAGKTQFIIQNHSQKALEWEILKGVMVVEERENIAPGFSQKMTANLQPGEYDMT
                     CGLLTNPKGKLIVKGEATADAAQSDALLSLGGAITAYKAYVMAETTQLVTDTKAFTDA
                     IKAGDIEKAKALYAPTRQHYERIEPIAELFSDLDGSIDAREDDYEQKAADPKFTGFHR
                     LEKALFGDNTTKGMDQYAEQLYTDVVDLQKRISELAFPPSKVVGGAAGLIEEVAASKI
                     SGEEDRYSHTDLWDFQANVEGSQKIVDLLRPQLQKANPELLAKVDANFKKVDTILAKY
                     RTKDGFETYDKLTDADRNALKGPITAQAEDLAQLRGVLGLD"
     gene            complement(9376..10204)
                     /locus_tag="JN001_002338"
                     /pseudo
     CDS             complement(9376..10204)
                     /locus_tag="JN001_002338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309290.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
     gene            10240..10542
                     /locus_tag="JN001_002339"
     CDS             10240..10542
                     /locus_tag="JN001_002339"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053544.1"
                     /translation="MQRKVNRSDSDYHYGKEKYKRNVYKMMLECKQREVMPGDINDYS
                     RVERWDCLQRTMCSCRMPRKRHIQPTKLSRLNASELPCKTDKRVYQAISSIRDYQI"
     gene            complement(10873..12381)
                     /gene="putP"
                     /locus_tag="JN001_002340"
     CDS             complement(10873..12381)
                     /gene="putP"
                     /locus_tag="JN001_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/proline symporter PutP"
                     /protein_id="HAY9053545.1"
                     /translation="MAISTPMLVTFCVYIFGMILIGFIAWRSTKNFDDYILGGRSLGP
                     FVTALSAGASDMSGWLLMGLPGAVFLSGISESWIAIGLTLGAWINWKLVAGRLRVHTE
                     YNNNALTLPDYFTGRFEDKSRILRIISALVILLFFTIYCASGIVAGARLFESTFGMSY
                     ETALWAGAAATILYTFIGGFLAVSWTDTVQASLMIFALILTPVIVIISVGGFGDSLEV
                     IKQKSIENVDMLKGLNFVAIISLMGWGLGYFGQPHILARFMAADSHHSIVHARRISMT
                     WMILCLAGAVAVGFFGIAYFNEHPAVAGAVNQNAERVFIELAQILFNPWIAGILLSAI
                     LAAVMSTLSCQLLVCSSAITEDLYKAFLRKHASQKELVWVGRVMVLVVALVAIALAAN
                     PENRVLGLVSYAWAGFGAAFGPVVLFSVMWSRMTRNGALAGMIIGALTVIVWKQFGWL
                     GLYEIIPGFIFGSIGIVVFSLLGKAPSAAMQKRFAEADAHYHSAPPSRLQES"
     gene            complement(12540..12749)
                     /locus_tag="JN001_002341"
     CDS             complement(12540..12749)
                     /locus_tag="JN001_002341"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053546.1"
                     /translation="MMLQLCATMLNVTCVASLKMNEMLIKEIDMTGIKKITQTFSLRQ
                     LTFLKGATAKNVRECNLMKNSVAEH"
     gene            12804..16766
                     /gene="putA"
                     /locus_tag="JN001_002342"
     CDS             12804..16766
                     /gene="putA"
                     /locus_tag="JN001_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001462364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trifunctional transcriptional regulator/proline
                     dehydrogenase/L-glutamate gamma-semialdehyde
                     dehydrogenase"
                     /protein_id="HAY9053547.1"
                     /translation="MGTTTMGVKLDDATRERIKSAATRIDRTPHWLIKQAIFSYLEQL
                     ENSDTLPELPALLSGAANESDEAPTPAEEPHQPFLDFAEQILPQSVSRAAITAAYRRP
                     ETEAVSMLLEQARLPQPVAEQAHKLAYQLADKLRNQKNASGRAGMVQGLLQEFSLSSQ
                     EGVALMCLAEALLRIPDKATRDALIRDKISNCNWQSHIGRSPSLFVNAATWGLLFTGK
                     LVSTHNEASLSRSLNRIIGKSGEPLIRKGVDMAMRLMGEQFVTGETIAEALANARKLE
                     EKGFRYSYDMLGEAALTAADAQAYMVSYQQAIHAIGKASNGRGIYEGPGISIKLSALH
                     PRYSRAQYDRVMEELYPRLKSLTLLARQYDIGINIDAEEADRLEISLDLLENLCFEPE
                     LAGWNGIGFVIQAYQKRCPLVIDYLVDLATRSRRRLMIRLVKGAYWDSEIKRAQMDGL
                     EGYPVYTRKVYTDVSYLACAKKLLAVPNLIYPQFATHNAHTLAAIYQLAGQNYYPGQY
                     EFQCLHGMGEPLYEQVTGKVADGKLNRPCRIYAPVGTYETLLAYLVRRLLENGANTSF
                     VNRIADTSLPLDELVADPVTAVEKLAQQEGQTGLPHPKIPLPRDLYGHGRDNSAGLDL
                     ANEHRLASLSSALLNSALQKWQALPMLEQPVAAGEMSPVINPAEPKDIVGFVREATPR
                     EVEQALESAVNNAPIWFATPPAERAAILHRAAVLMESQMQQLIGILVREAGKTFSNAI
                     AEVREAVDFLHYYAGQVRDDFANETHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS
                     VLAKPAEQTPLIAAQGIAILLEAGVPPGVVQLLPGQGETVGAQLTGDDRVRGVMFTGS
                     TEVATLLQCNIASRLDAQGRPIPLIAETGGMNAMIVDSSALTEQVVVDVLASAFDSAG
                     QRCSALRVLCLQDEIADHTLKMLRGAMAECRMGNPGRLTTDIGPVIDSEAKANIERHI
                     QTMRSKGRPVFQAVRENSEDAREWQSGTFVAPTLIELDDFAELHKEVFGPVLHVVRYN
                     RNQLPELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGAVVGVQPF
                     GGEGLSGTGPKAGGPLYLYRLLANRPESALAVTLARQDAEYPVDAQLKAALTQPLNAL
                     REWAANRPELQALCTQYGELAQAGIQRLLPGPTGERNTWTLLPRERVLCIADDEQDAL
                     TQLAAVLAVGSQVLWPDDALHRQLVKALPSAVSERIQLAKAENITAQPFDAVIFHGDS
                     DQLRALCEAVAARDGAIVSVQGFARGESNILLERLYIERSLSVNTAAAGGNASLMTIG
                     "
     gene            complement(16806..17444)
                     /gene="rutR"
                     /locus_tag="JN001_002343"
     CDS             complement(16806..17444)
                     /gene="rutR"
                     /locus_tag="JN001_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator RutR"
                     /protein_id="HAY9053548.1"
                     /translation="MTQGAVKTTGKRSRAVSAKKKAILSAALDTFSQFGFHGTRLEQI
                     AELAGVSKTNLLYYFPSKEALYIAVLRQILDIWLAPLKAFREDFAPLAAIKEYIRLKL
                     EVSRDYPQASRLFCMEMLAGAPLLMDELTGDLKALIDEKSALIAGWVKSGKLAPIDPQ
                     HLIFIIWASTQHYADFAPQVEAVTGATLRDEVFFNQTVENVQRIIIEGIRPR"
     gene            17732..>17868
                     /locus_tag="JN001_002344"
     CDS             17732..>17868
                     /locus_tag="JN001_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine utilization protein A"
                     /protein_id="HAY9053549.1"
                     /translation="MKIGVFVPIGNNGWLISTHAPQYMPTFELNKAIVQKAEHYHFDF
                     AL"
BASE COUNT         4488 a         4820 c         4380 g         4180 t
ORIGIN      
        1 ggtatacaac attcaggacg aaaccgggca atttaaaccc tacccggcaa gtaacttctc
       61 cactgctgtt ccgcaaagcg ccacggcaat gctggtcacg gcattgaaag attctcgctg
      121 gtttataccg ctggagcgct agggcttaca aaacctgctt aacgagcgca agattattcg
      181 tgcggcacaa gaaaacggca cggttgccat taataaccga atcccgctgc aatctttaac
      241 ggcggcaaat attatggttg aaggttcgat tatcggttat gaaagcaacg ttaaatcggg
      301 cggtgttggg gcaagatatt ttgggatcgg tgcagacacg caataccagc tcgatcagat
      361 tgccgtgaac ctgcgtgtcg tcaatgtgag taccggtgag atcctctcct cggtgaacac
      421 cagtaagacg atactttcct atgaagttca ggccggggtt ttccgcttta ttgactacca
      481 gcgcttgctg gaaggggaag tgggttacac ctcaaacgaa cccgttatgc tgtgtctgat
      541 gtcggctatc gaaacagggg tcattttcct gattaatgat ggtatcgacc gtggtctgtg
      601 ggatttgcaa aataaagcag aacggcagaa tgacattctg gtgaaatacc gccatatgtc
      661 ggttccaccg gaatcctgac agataaaaaa gccggaatta tcatccggca ttttactgtt
      721 taagcgaaag cgtgagtgcc cctcacgctt tatttttgat ttcctgctca cggtgagccg
      781 tctttgcact acgcgccgcc agccacaggc cgctgttttt cattgcgtaa ccaaatacca
      841 gcccaagcgc cagcgaaggt aacaccagtt tccagtcacc ctgcccggca aacgtcgcgc
      901 atgcgcctat aaacgtcccc ggaacaaatg aaagcagcag ctgtttggcc tgaatacaca
      961 tcagaaacgc cacaataccg gttatgacat aaccgagaat ttccagatgt ggtgccagtg
     1021 cactaccgta aataatgacc atcgcccaca ccacgccact aagcagggtt gcagcggaga
     1081 tcgccagccc tttcagccca ccttgcgggc aggcaaagta ggccgtacag cccaggaagc
     1141 ccgcccagct tagtaagccc agggaaacag ccacccatcc ccagataccg gagagaatgc
     1201 ctgttgtgat tgcaatagag agaagtatgt tcatgccgcg catgatagca gaaaacgcgg
     1261 ccatgaatga gatcgagcac acattttatg caacaacaaa ttatctgttg cagttatgag
     1321 tgacgatgat cacatttact cttcagaatc ttcttccagc tcgtcccaca ttgcactaat
     1381 ggcatcacgg gttagcggtg ccatggtgcg ccagaaaggc gtggttgcat gggcctccac
     1441 tttgccgagg aacgcaccac accagggtaa cagatactca ctgaacagtg tttccagtgc
     1501 ttcgctctca tcttccgttg actgatcttc catccaggaa gccgcaagca gcaatgtgcc
     1561 gatgtgatcg gctggcgtat ccgccagtgg catccctcgt tcggaaagaa aagcgcgcac
     1621 ttccgcttcc gttgcgtcct caacccatgc gctacgatat ggcggcacgg cacattcatc
     1681 gccgataaac aacgcattgt aatcggcaga gacttgcgcc atatcacagc ttttctgtaa
     1741 acgcgtcagt aactcatcct gctccagtgg ccagttcgca gccagtttcc cctcacgaat
     1801 cagggtaaac agcggcacca gtaaaggatc ttgcggttgg cggtaataga gcgaacccag
     1861 cacacgacag aggatagaaa actcgttcat taatatattt ccattactag taattaaagg
     1921 tctgcaaatt ccgcaatcgg tgccataccg cgagattcaa ggaagttcag taagcggcgc
     1981 ggagaaacat tcaaaatgcg ctctggcgga aaatctaccg cgtcgaggat tttaagacac
     2041 tcttcaaatt cccccatggt aaacgcggtg tgagaatccg agcctaatgc cacccaacct
     2101 ccagcatcac gtaccgctgc ggctaccgca cgacagttgt cttcactgcc cttacgtgag
     2161 tgtaaaaatg aagaattatt gatttccagc gccacctgat gtttcgcggc tgcttcagca
     2221 acggctttca catctatttc atatttggga tttccgggat ggcttattat atgcacattg
     2281 ccgctggcga tagtggcgat catcgcttgt gtattggtcg ctttgtcatg tggtgcaaaa
     2341 accggctcat gaaaaccggc aataatcaga tccagcgagt caaacatttt accgctgcaa
     2401 tcaatttcac catcaacatt tttaatgtta gcttcgatgc cgcgcaggat ccctacccca
     2461 tcaaccactc gcggccagat acgcatgtta atgaagtgcc agtgatgcgg agcatcttcc
     2521 atatccgggc catgatcggt gatcgcaaaa agtttaatgc ccttttgttt ggcctgggca
     2581 atgtaatcac tcaatgtgct atatgcatgt gtgctggcaa cggtatgcat atgaaggtcg
     2641 acgggataca taactctctc ctgtattcaa ttcccgccaa ggatagcagg aatcctgatg
     2701 ctttattagt agccgcgtgc gcggtcgact tgcccgcaga ccctctcccc tttttcgagc
     2761 tgggcaatgg tgcgagaaat gtactccaca gcttcagcgg gacgggtaat cgcggcgaca
     2821 tgtggtgtta tcgtcacgcg tggatgttgc cagagcggac tttcaggcgg taagggttca
     2881 cgattaaaaa catccaacat tgcgccttta actttgccgc tatccagcgc cgcgagcagg
     2941 tcatcttcca caacatgaac accacgcgcc aggttgagga gatacgcgcc atccggtaat
     3001 ttttcgagta attgttgatt aataatgccg acggtttcag gggtattcgg taacaaatta
     3061 atcaataccc gacattggct cagaaatgca gacagttctt cccgtccggc aaagctttgc
     3121 acgccaggcc acgatttacg ggttcgactc cagcaacgca gcggaaagcg ccaggtttgc
     3181 agactctgag caactttact gcccagtacg cctgcgccca aaatgccgat ggtaaaatct
     3241 tcccaatgat attcaggcag cggttgccaa tgcgaactat tttgctggat gcgataatcg
     3301 tcaaaacgtc gaaaccaatg cagcacctga ctgacagcat attcctgcat ttgctcgccc
     3361 ataccagtat cttccaggcg aaaaagtgga acagaagggt tcagcatttc agggtgtgcc
     3421 tgtagcttgc tcaaaataga atcaacaccg gccccgagtg cgaacaccgc tttaagatcg
     3481 cgccctgcca gcatttcaac aggaggatgc cagactaaag cataatcagc agagtcatta
     3541 tctccgcttt tccatgctct gactcttgcc tgaggaatag ctttgcgcag tgcctcaatc
     3601 caccattggg tatcgaacgt tgggtgataa aagatgatat ccatactgac tcccgaaaag
     3661 cgttgtgcga aatttattcg cacttatcgt tatgatctac aaaggccacc agcataacaa
     3721 atccgtggtc ggtggcaaaa aaagcagatt tcgcttatta aaaccacaca ttgattgaag
     3781 tttgaataaa cgcgcgattt tttcaaaaag tttgttgacc tcaggtcatg atttccctaa
     3841 attagcgccc gttccagcaa gacaggaaca acaatttggt gaggtgtccg agcggttgaa
     3901 ggagcacgcc tggaaagtgt gtatacggca acgtatcggg ggttcgaatc cccccctcac
     3961 cgccatattt aaagaagagc tcgtacgaaa gtacgggctt ttttttcgta tattgcacac
     4021 accgggggga tgagaagccc cgaccggggt tcgacaactg gcgacagcca gttggacaga
     4081 ccgtgaacgc agtgagcggg ctgcccgcag ggcgagcgaa gcgagtcaat ccccccctca
     4141 ccgccatctt taaagaagag ctcgtacgaa ggtacgggct ttttttcgta tattgcacac
     4201 accgggggga tgagaagccc cgaccgggat acttagttaa tgcaccggtt cactctttgt
     4261 cgccgcgact aatgggcgaa ttttgtcacg agtctcccag accggaggaa tttcctccaa
     4321 tttagtgaca gaagctcgta caaaaggcac ccgtgcaaga gtcataattg tatccaacca
     4381 acggtcacga ataatgcgat ccgccctttc atgactcggg tcatccagct caataacaca
     4441 gactatttta ttgttcttct ttgaaaccag aacataatcc attgccatgc cattataaat
     4501 tgcaaagaaa cgctttcttt cttcttcgct aaactcaggt tgttctggaa agttgatcaa
     4561 gcgccccaga gagacctggc aatggatatg acaataatgt ccaaaccatt tttccagatt
     4621 atcgaaatac attttttcac aacgagtgat taaccactct tttctttcca ataaaatacc
     4681 ttcggcaacc attccctgaa ataactcatc tcgctcttgc caacgagagt cacgataggt
     4741 tttctgcggt atatagctcc ttgtcgacgc cttagcggca ggggaagttg cagatgaagg
     4801 gacgggttgc gatttagcga tgattaccga tgaggcaact tttcggagtg tcaattttct
     4861 ggcaacagca aaaccggcga taaatgcaat tgtcaaacaa gttacaaaag ccataaagct
     4921 cataattaat tttcacctat ccatgttgat tatatttcat taccaatgtt actcgctgca
     4981 gcgtgttaca tgccaacaat gcaacgatca atatatagtt agtatcatgt tttgattatt
     5041 acaaccatcc ctatttagcc attgcggctt gccttccaca aaaaaataac aacacacaat
     5101 attagcaaag aattaattaa gattaacctt acatttataa tattatccct aaagaataaa
     5161 tcagaggaat atattcggtg ttaaacagtc agtcaaagta tagcccattg ttgattaaac
     5221 ctcataagca aaattggcac cagatctcct gtacaggttg aatggccgaa aaaagatagg
     5281 cagatgctca tttttttggc ttctggaaga aaaactctcc gcgctggcag tattacactg
     5341 gtctgatgct atgacgaaaa atgcctggta agagtatcta aaccagactc cagttcagct
     5401 tatcaacacg ctcaaagtcg cccccctgaa cgctaacctg aagtgaaaat ctgttgaaat
     5461 aaaacaaagc ccggttcgcc cgggctctgc accgataaca cacttaactg tatgcatgca
     5521 gcgtacgttg gcaaagtgcc gaacgtacgc aatcctcttt tccgaaccgg acgatcccaa
     5581 ccatttcatc ttcttcgaaa cgttccagcg cgtcacttaa tccggagcac acgccgcgag
     5641 gcaaatcgca ttgcgtgata tcaccgttga cgataaccgt cacgttctcc ccgaggcggg
     5701 ttaaaaacat tttcatttgc gcggcagtca cattctgcgc ctcgtcaaga atgacgactg
     5761 cattttcaaa ggtacgtcca cgcatatagg cgaacggcgc gatttccacc ttccctattt
     5821 ccggtcgcag gcagtactgc ataaaggaag cccctaagcg ccggaccagc acgtcgtaga
     5881 ccgggcgaaa atagggagca aacttttctg cgatatcacc aggtaagaag ccaagatctt
     5941 catcggcttg cagaactgga cgggtgacga taatcctgtc gacatcctta tgtatcaggg
     6001 cctctgccgc ttttgctgcg ctgatccagg tttttccgca cccggcttcg cccgtggcga
     6061 atatcagctg cttactctca atagccttca gatagtgcaa ttgcgcttca tttcgcgcga
     6121 ggatgggcga ggtatcgcga ctgtcgcggg ccataccaat ggcttctacg ccgctcatct
     6181 gcacaagcga ggtgaccgat tcttcttcac gctgcttatg gctgcgcgaa tcccgtctca
     6241 gcacacgttt tgcctcgcga cgagctttga tcactgcttt ttgtcttccc atggagagca
     6301 ccttgagttg tttgtattca tcacacgcgc cgttggcagc gcgattatgc gcacgaacat
     6361 cagagggttg gcttccttgt aagccatagt ttgcttttgg ataaaatgcc gaaaaacggc
     6421 tacgcgcacc gtttacggcg tcggtaacac atgaaaagaa aggatgaggt tgaaaatgca
     6481 aagtgacgag atgactaccg gaggagaaaa ctccgcgagt ggtggcgcgt tgattatcta
     6541 aaacatgtcc agtacaggac gttaccatcc gcgatctcca tagtgactga ctatcactgc
     6601 cgggaacttc cgctgctact taataagtac aacagatctc gcattttatt gcaacaatat
     6661 atttacttat atttaactat aaaacactat ttcagtgaca ttagtttcta ctggaaagat
     6721 gacagagtga tgacagtgat gaaaaaagct gtgtgctttc agcaggattt gcatcaggca
     6781 tcagtgcacg atcgccggat gcggcgtgaa cgccttatcc agcctaccaa acccgcactg
     6841 attgtaggca tgataagacg cgcaagcgtc gcatcaggca tctgcgcaca aatgccttat
     6901 ccgcctaaaa acattaaacc cgcaataacg cgcttccgag ataatcgttc gcgtccttca
     6961 ctcccggcag cgaaaaaaaa taaccgccgc cgataggttt aacgtattcc tccagcgctt
     7021 cgccattgag ccttttttgt actgtcagga agcctttttc cagatcgtgt tggtagcaga
     7081 caaacagcaa ccccatatcc agttgtccgg agttggtgac ccccaacgaa taactgtagc
     7141 cgcgacgcag catcaggctg gactcactct ccgccgtgcg gggattcgcc agccggatat
     7201 ggctgtccag cgcgatcacc ttcccttccg ggtcgctggc gtaatcaggc acatcatgct
     7261 catgctgcat tcccagcggc gcaccggttt gcttatcacg gccaaaaatc gtctgctgtt
     7321 ctttcagcgg cgttctgtcc caaaattcca ctcgaaactg aatcaagcgt actgcctgat
     7381 agctgccacc gattgtccac gcaggctcct gctgatctgc cgttacccac accacttttt
     7441 gcatcaactt atcattctgg ctatcgggat tggcagtgcc gtctttaaag cccagcaaat
     7501 taatcggcgt ctctttgcct ttactacgcg ctgcgtgatc ggaaataaac ccttcccgct
     7561 tccagcgcac gctgagcaaa tccggcgtgt gtttgatgat atcgcgcagc gcatggatca
     7621 ccgtgtcctg ggtgttggcg caaatttgta gcaacacatc accatggcat aacgccgcat
     7681 ccagcgagtc gttggggaaa cgcgtcatct tctgcaactt tttcggcatc tgtggcgcaa
     7741 ggccaaaccg ctcatcaaac aatgagtgac ccaccgataa cgtgatggtg agattatcgg
     7801 gcgcaatgta gccgccaaga atgccggaat cgagtggtgg caggcgcgga tttggcgttt
     7861 ctggtgccgc tccgccctga gtcagaaaag caaaacgctg agtcaacaag cgaaacaacc
     7921 gttcaagatc ggctttatcg ctggcaagca catcaaacgc caccagcatc attgcggcct
     7981 gttgtggcgt caggatccct gcctgatgct caccataaaa cggctgtttc tcattgcgtg
     8041 catccggtga aagcgtaccc ggcgcacttt gcgttttttg tgcatgagcg accggacaac
     8101 ttcccgccag cgccagcgca cctatcactt tcagtaaacg tcggcgtgac ggttcattca
     8161 cgccgttttc atctttatac tgcataacgc ttaatccagt cccagcacac cgcgaagttg
     8221 cgccagatct tccgcctgcg cagtaatcgg tcctttcagt gcattccggt cggcatcggt
     8281 caatttgtcg taggtttcaa aaccgtcttt agtacggtat ttcgccagaa tggtatcgac
     8341 ctttttaaag ttggcatcga cttttgccag cagttccggg ttggcttttt gcagttgtgg
     8401 acgcagcaaa tcgacaattt tctgcgagcc ttcaacgtta gcctggaaat cccacagatc
     8461 ggtgtggctg tagcgatctt cttcaccgct aattttgctg gctgccactt cctcaatcag
     8521 tccggctgcg ccgccgacca cttttgaagg tgggaaagcc agttcactga tgcgtttttg
     8581 caaatcgacc acatctgtat aaagctgctc agcgtactga tccatccctt tggtggtgtt
     8641 gtcgccaaac aatgcttttt ccagacggtg gaaaccagtg aattttgggt cggcggcttt
     8701 ttgctcgtaa tcatcttcac gggcgtcaat gctgccatcc agatcggaga acagttcagc
     8761 aatcggttca atgcgctcat agtgctggcg cgtcggcgca tacagtgctt tcgctttttc
     8821 gatatcgcca gctttaatcg cgtcggtaaa ggctttggtg tcggtcacca gctgcgtggt
     8881 ttccgccatg acatacgctt tatatgcagt aattgcacca ccaagactta acagcgcatc
     8941 actttgcgcc gcatccgccg ttgcctcacc tttgacgatc aacttccctt tcgggttagt
     9001 cagcagaccg caggtcatat cgtattcgcc aggctgtaaa ttcgccgtca ttttctggct
     9061 aaaaccaggg gcgatatttt cccgctcttc caccaccatc acgcctttga ggatctccca
     9121 ctccagcgcc ttctggctat ggttctgaat aatgaactgt gttttcccgg cgttaaccgt
     9181 aatggtcatc ggttcgcact gcttatccgt cacggtcact ttgacctgcg gcacatcagc
     9241 ggcgttagcc ataaaagcag aagaaaacag cgcagccacg ctcaactgca atgcgttacg
     9301 gcagaagtta atggtcatga cgagactatc cctttaaagt atgttgtaac taagcaagag
     9361 tttgcgtcgt atttgttacg cggagcgaga cgctgtcgcc cctgcgcgtg gtggcagagc
     9421 aaatgccacc agcgccggga tgagataaat aaaccagacg gcgacttcgc tgacgctcgg
     9481 cgcttcctga tagccaaaaa tcccttccat cagcgtgcca aacagcgagt gagttgagag
     9541 caccgcactc atatcgaagg cgatttcctg aaagtggttc cacaatccgg cttcatgaaa
     9601 tgcgcgaatg gcaccagctg ccagccctgc ggcgacgaag agaataaaca ggctggtcca
     9661 tttaaaaaat gcaccaagat tgaggcgaat accgccccag tagagcagaa agccgagcac
     9721 cacggctgta gcaagaccga gcattgcacc cagcggcggc cagatcccga catcttgttg
     9781 aaatgccgcc agcaggaaaa agaccgactc cagcccttcc cttgcaacgg caaaaaagac
     9841 catcatcacc agcgcccagc catgatgatt tccacgctac aatgcgctat cgactgcctg
     9901 ttccagttgc acttacgttg cgcgacactt tgcgcatcca gaaaaccatc caggtaagga
     9961 tcaccacggc gatcaccgcc acgatacctt caaacagttc ctgttctttt tgcggaaatt
    10021 cgccggtggt ttcgttaatg aagatcccca ggcccaggca caacgcagcg gcaagcaaca
    10081 cgccaatcca catcacacca atccatcggc ctcgctgggt acgcttaaga tagctggcaa
    10141 tcaaactgac aatcagcgcg gcttcaagtc cttcgcgcaa cataatgaga aacggaacaa
    10201 acatgccacc cacccttaaa cgtttttctg agtcaatcta tgcaaagaaa agtaaatcgc
    10261 agtgatagcg attatcatta cggtaaagaa aaatacaagc ggaatgttta taaaatgatg
    10321 ttggaatgta aacaaagaga ggtaatgcca ggggatataa acgattattc cagggtagaa
    10381 agatgggatt gtttgcaaag aaccatgtgt tcttgccgga tgccgcgtaa acgccatatc
    10441 cagccgacaa aactgtccag actcaatgca tcagagcttc catgtaaaac tgataagcgg
    10501 gtgtatcaag caatttcgtc catccgcgat tatcaaatct aactttttgc ccggaacata
    10561 ataacagctc gggtgttggt ggcgtcaaaa tcgctgaagc gttccccgaa ggccgggaca
    10621 gcccacatgg atgtgggctg agggcgcgtc ttacaggacg ttacctcgcg cccgacccgg
    10681 tagccgaagg ggataagctg aaggtaccgc gcagcggcga ttttgttcgc cagagcccgg
    10741 gggtgcacag ggggcggcgg cgattggccg ccccctgcgc gctccctgca ccattcaatt
    10801 tatatggcga ggcacattaa gggagcgcaa cccgctgctg aagccaaaca aaaccgccgc
    10861 aggctaagtc ccttagcttt cctgcaaccg tgacggcgga gccgaatgat agtgcgcatc
    10921 ggcctcggca aagcgttttt gcatcgccgc tgacggcgct ttacccagca aactaaacac
    10981 tacaatcccg atactgccga agatgaagcc cggaataatt tcgtacagtc ccagccagcc
    11041 gaactgcttc cagacgataa ccgtcagcgc accgatgatc atccccgcca gtgcaccgtt
    11101 acgcgtcatg cgtgaccaca tcaccgagaa cagcaccacc ggaccaaacg ccgcgccaaa
    11161 gcctgcccac gcgtagctca ctaagcccag cacgcggttt tccgggtttg ccgccagcgc
    11221 aatcgccacc agcgccacca ccagcaccat cacacgccct acccacacca gctctttctg
    11281 gctggcatgt ttacgcagaa acgctttgta taaatcttcg gtaatcgcac tggagcacac
    11341 cagcagttgg caacttaagg ttgacattac cgccgccaga attgccgaca gcagaatccc
    11401 ggcaatccac gggttaaaca gaatttgcgc cagttcgata aacacgcgct cggcgttctg
    11461 gtttaccgcg cctgctaccg ccgggtgctc attaaagtaa gcaatcccaa agaagccgac
    11521 agccaccgcc cctgccaggc agaggatcat ccaggtcata ctgatacgac gcgcatggac
    11581 aatgctgtgg tgagaatccg ccgccataaa acgcgccaga atgtgcggct gcccgaagta
    11641 acccagcccc caacccatca gtgagataat ggcaacaaag ttcagacctt tgagcatatc
    11701 aacgttttcg atgctctttt gtttgatcac ttccagcgag tcaccaaagc caccgacact
    11761 gataatgacg ataaccggtg tcaggatcag ggcaaaaatc atcaggctgg cctgtacagt
    11821 gtcagtccag ctcaccgcga ggaaaccgcc aataaaggtg taaaggatcg tcgccgcagc
    11881 tcccgcccac agagccgttt cgtagctcat gccaaaggta ctttcaaaca gacgcgcgcc
    11941 tgccacaatg cccgaagcgc aataaatggt gaagaacagc aaaataacca gcgcggagat
    12001 aatgcgcaaa atgcggcttt tatcttcaaa acgcccggtg aaataatccg gcaatgttaa
    12061 ggcgttatta ttgtattcgg tatgcacacg caaccgcccg gccaccagct tccagttgat
    12121 ccacgcgcct aatgtcaggc caatggcgat ccagctttcg gaaatcccgg aaagaaaaac
    12181 cgcgccaggc aaccccatta acagccagcc gctcatatcc gacgcacccg ccgataatgc
    12241 cgtcacaaat ggcccaagac tacgaccgcc cagaatatag tcgtcaaagt ttttcgttga
    12301 tcgccaggcg ataaacccaa tcaatatcat gccaaagata tagacacaaa atgtcaccaa
    12361 catcggtgtg ctaatagcca tctaaagtct ccaaaaaatt attatcggca atgtcgaaac
    12421 ttgccgttat atctgcaacc ggaacggggt aacagagttt attttttacc agggcgaccg
    12481 tatcctgccg gaagcgctgg ttattcacaa tcgatttaac acaccattta cattaaattt
    12541 tagtgctcag cgacactatt tttcatcagg ttgcactctc tcacattttt tgcggttgca
    12601 cctttcaaaa atgttaactg ccgcagagaa aaagtctgag ttattttttt aatccctgtc
    12661 atatcaattt cttttattaa catttcattc atttttaagc ttgctacgca ggtcacattt
    12721 aacatggttg cacaaagttg caacatcatg gatatttcac gataacgtta agttgcacct
    12781 ttcagaacaa caggagtaat ggcatgggaa ccaccaccat gggggttaag ctggacgacg
    12841 cgacgcgtga gcgtattaag tctgccgcga cacgtatcga tcgcacgcca cactggttaa
    12901 ttaagcaggc gattttttct tatctcgaac aactggaaaa cagcgatact ctgccagagc
    12961 tacctgcgct gctttctggt gctgccaatg agagcgatga agcaccgact ccggcagagg
    13021 aaccacacca gccattcctc gactttgccg agcaaatttt gccccagtcg gtttcccgcg
    13081 ccgcgatcac cgcggcctat cgtcgcccgg aaaccgaagc ggtttctatg ctgctggaac
    13141 aagcccgcct gccgcagcca gttgctgaac aggcgcataa actggcatat caactggccg
    13201 ataaactgcg taatcaaaaa aatgccagtg gtcgcgcagg tatggtccaa gggttattgc
    13261 aggagttttc gctgtcatcg caggaaggcg tggcgctgat gtgtctggcg gaagcgttgt
    13321 tgcgtattcc cgacaaagcc acccgcgacg cgttaattcg cgacaaaatc agcaactgta
    13381 actggcagtc acacattggt cgtagcccgt cactgtttgt taatgccgct acctgggggc
    13441 tgttgtttac tggcaaactg gtttccaccc ataacgaagc cagcctctcc cgctcgctga
    13501 accgcattat cggtaaaagc ggtgaaccgc tgatccgcaa aggtgtggat atggcgatgc
    13561 gcctgatggg cgagcagttc gtcacgggtg aaaccatcgc ggaagcgtta gccaatgccc
    13621 gcaagctgga agagaaaggt ttccgttact cttacgatat gctgggcgaa gctgcactga
    13681 ctgccgcaga cgcacaggcg tatatggttt cctatcagca ggcgattcac gccattggta
    13741 aagcgtctaa cggtcgtggc atctatgaag gtccgggcat ttcaatcaag ctgtcggcgc
    13801 tgcatccgcg ctacagccgc gcccagtatg accgggtaat ggaagagctt tacccgcgtc
    13861 tgaaatcact caccctgctg gcgcgtcagt atgatattgg tattaacatc gatgccgaag
    13921 aggccgatcg tctggagatc tccctcgatc tgctggaaaa tctctgtttc gagccggaac
    13981 tggcaggctg gaacggcatc ggttttgtta ttcaggctta tcaaaaacgc tgcccgttgg
    14041 tgatcgatta cctggttgat ctcgccaccc gcagccgtcg ccgtctgatg attcgcctgg
    14101 tgaaaggcgc gtactgggat agtgaaatca agcgtgcgca gatggacggc cttgaaggct
    14161 atccggttta tacccgcaag gtgtataccg acgtttctta tctcgcctgt gcgaaaaagc
    14221 tgctggcggt gccgaatcta atctacccgc agttcgcgac gcacaacgcc catacgctgg
    14281 cagcgattta tcaactggca ggtcagaact actatccggg tcagtacgag ttccagtgcc
    14341 tgcatggtat gggcgagcca ctgtacgagc aggtcacagg gaaagttgcc gacggtaaac
    14401 ttaaccgacc gtgtcgtatt tatgccccgg ttggcacata tgaaacgctg ctggcgtatc
    14461 tggtgcgtcg cctgctggaa aacggtgcta acacctcgtt tgttaaccgt attgccgaca
    14521 cctctttgcc actggatgaa ctggtcgccg atccggtcac tgctgtagaa aaactggcgc
    14581 aacaggaagg gcaaactgga ttaccgcatc cgaaaattcc cctgccgcgc gatctttacg
    14641 gtcacgggcg cgacaactcg gcagggctgg atctcgctaa cgaacaccgt ctggcctcgc
    14701 tctcctctgc cctgctcaat agtgcactgc aaaaatggca ggccttgcca atgctggaac
    14761 aaccggtagc ggcaggtgag atgtcgcccg ttattaaccc tgcggaaccg aaagatattg
    14821 tgggctttgt gcgtgaagcc acgccgcgtg aagtagaaca ggcgctggaa agtgcggtta
    14881 ataacgcgcc aatctggttt gccacgcctc cggctgaacg cgcggcgatt ttgcatcgcg
    14941 ctgccgtgct aatggaaagc cagatgcagc aactgattgg tattctggtg cgtgaagccg
    15001 gaaaaacctt cagtaacgct attgccgaag tgcgcgaagc ggtcgatttt ctccactact
    15061 acgccggaca ggtgcgggat gatttcgcta acgaaaccca ccgtccatta gggcctgtgg
    15121 tgtgtatcag tccgtggaac ttcccgctgg ctattttcac cgggcagatc gctgccgcac
    15181 tggcggcagg taacagcgtg ctggcaaaac cggcagaaca aacgccgctg attgccgcgc
    15241 aagggatcgc cattttgctg gaagcgggtg taccccctgg cgtggtgcaa ttgctgccag
    15301 gtcaggggga aaccgtgggc gcgcaactga cgggtgatga tcgcgtgcgc ggggtgatgt
    15361 ttaccggttc aaccgaagtc gctacgttac tgcagtgcaa tatcgccagc cgcctggacg
    15421 ctcagggtcg ccctattccg ctcatcgctg aaaccggcgg catgaacgcg atgattgtcg
    15481 attcttcagc actgaccgaa caagtcgtcg tggatgtgct ggcctcggcg ttcgacagtg
    15541 cgggtcagcg ttgttcggca ctgcgcgtgc tgtgcctgca agatgagatt gccgaccaca
    15601 cgttgaaaat gctgcgcggt gcaatggccg aatgccggat gggtaatccg ggtcgcctga
    15661 ccaccgatat cggtccggtg attgatagcg aagcgaaagc caatattgag cgccatattc
    15721 agaccatgcg tagcaaaggc cgtccggtgt tccaggcggt gcgggaaaac agcgaagatg
    15781 cccgtgaatg gcaaagcggc acctttgtcg ccccgacgct gatcgaactg gatgactttg
    15841 ccgaattgca caaagaggtc tttggtccgg tgctgcatgt ggtgcgttac aaccgtaacc
    15901 agctaccaga gctgatcgag cagattaacg cttccggcta tggtctgacg cttggtgtcc
    15961 atacgcgtat tgatgaaacc atcgcccagg tcactggctc ggcccatgtt ggtaacctgt
    16021 atgttaaccg taatatggtg ggcgcagtgg ttggtgtgca gccgttcggc ggcgaagggt
    16081 tgtccggtac cgggccgaaa gcaggcggtc cgctctatct ctaccgtctg ctggcgaatc
    16141 gcccggaaag tgcgctggca gtgacgctcg cgcgtcagga tgcagagtat ccggtcgatg
    16201 cacagttgaa agccgcattg actcagccgc taaatgcact gcgggaatgg gcagcaaatc
    16261 gtccagaatt gcaggcgtta tgtacgcaat atggcgagct ggcgcaggca ggaatacaac
    16321 gattgctgcc ggggccgacg ggtgaacgca acacctggac gctgctgccg cgtgagcgcg
    16381 tgttgtgtat tgccgatgat gagcaggatg cgctgactca gctcgccgcc gtgctggcgg
    16441 tgggcagcca ggtactgtgg ccggatgacg cgctgcatcg tcagctagta aaggcattgc
    16501 catcggcagt cagcgaacgt attcaactgg cgaaagcgga aaatataacc gctcaaccct
    16561 ttgatgcggt gatcttccac ggtgattcgg atcagcttcg cgcattgtgt gaagccgttg
    16621 ctgcgcggga tggagcaatt gtttcggtgc agggttttgc ccgtggcgaa agcaatatcc
    16681 ttctggaacg gctgtatatc gaacgttcgc tgagtgtgaa taccgctgcc gctggcggta
    16741 acgccagttt aatgacgatc ggttaaacag gtagccggag gatgttacac cctcctccgg
    16801 catctttaac gtggtcgaat cccctcaata ataatccgct gcacgttttc aaccgtttga
    16861 ttgaaaaata cctcatcgcg caacgttgcg cctgtcaccg cctccacctg aggggcgaaa
    16921 tcggcgtaat gttgagtgga agcccaaata ataaaaatca aatgctgcgg atcaatcggc
    16981 gcgagtttgc cgcttttgac ccaaccggca atcagcgccg atttctcatc aattaatgcc
    17041 ttcaaatcgc ccgtcagttc atccattaac agcggcgcgc ctgccagcat ctccatacag
    17101 aacaggcgcg aagcctgcgg ataatcgcgt gagacttcca gcttcagacg gatgtactct
    17161 ttgatcgccg ccagcggggc gaaatcttca cgaaacgctt ttaacggtgc cagccagata
    17221 tcgagaatct gccgcagcac ggcaatatac agcgcctctt ttgacggaaa gtaatacagc
    17281 agattggttt ttgaaacacc cgccaactct gcgatctgct ccagccttgt gccgtgaaaa
    17341 ccgaattgtg aaaaagtgtc cagtgctgcg ctaagaatcg cttttttctt cgcgcttact
    17401 gcgcgcgaac gtttacccgt tgttttcact gcgccttgcg tcatgcgctc tcccctcttg
    17461 tagattggca acaggatagc aaaacccccg cccggcctcg accttctgca ctctcatcgc
    17521 gcacggatgc atgttttatg tgcaactgtt ttgaccgttt agtccacttt ttaccagata
    17581 ttttagataa cacaatgcta acacattaat aacattcact ttttaaaaac tggcatccgc
    17641 tttgcaaaca agccaatacg cggctgaaaa ggatatgcag gatgcagcgc cccgtctgac
    17701 tttcacttta cgagacgaag agaggttgat gatgaaaatt ggcgtattcg tacctattgg
    17761 caacaacggc tggctcattt cgacccacgc gccgcagtac atgccgacct ttgaactgaa
    17821 taaagccatt gtgcaaaaag cggagcatta ccatttcgat ttcgccct
//
LOCUS       DADMJE010000077        17798 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.078, whole genome shotgun sequence.
ACCESSION   DADMJE010000077 DADMJE010000000
VERSION     DADMJE010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17798)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17798)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17798
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.078"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..386
                     /locus_tag="JN001_002345"
     CDS             <1..386
                     /locus_tag="JN001_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053550.1"
                     /translation="LAEVRQHTWSSGTNGVVAATFSLRLKGKPVSFVVPLAFVKNLDK
                     TLTVNTGALLTMSVSANGGMPPYKYAWKKDGQPVDGQTTDTFSKPGAQSADAGKYTCV
                     VTDSAEKAQSVTSVECTVTVSAAAG"
     gene            401..775
                     /locus_tag="JN001_002346"
     CDS             401..775
                     /locus_tag="JN001_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053551.1"
                     /translation="MKKDLKTLALARLSGFRHKTVKVPEWGNVSVVLREPSAEAWYLW
                     QEVLNGDGEDDDTLSVVAKTRRNLEADVTLFCDVLCDTDLQRVFTPDDREQVLAVYGP
                     VHARLLRQALELIADAESARKK"
     gene            871..1080
                     /locus_tag="JN001_002347"
     CDS             871..1080
                     /locus_tag="JN001_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4035 domain-containing protein"
                     /protein_id="HAY9053552.1"
                     /translation="MWMEFDRISPLGDERGDIRNAQIVKAVFGAQGMNVALKDVMLCW
                     GEDEDKPEVDPFAALEDALSFAAQS"
     gene            1128..1388
                     /locus_tag="JN001_002348"
     CDS             1128..1388
                     /locus_tag="JN001_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000224021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053553.1"
                     /translation="MATLRELIIKIVSFRGTHIDAFFRRASSAAHTNARGLITVDLFC
                     CTEAIARQVPEAGSEVLSSVIASGREVLTRGLIAGDDVLTRE"
     gene            complement(1523..3124)
                     /locus_tag="JN001_002349"
     CDS             complement(1523..3124)
                     /locus_tag="JN001_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISEc49 family transposase"
                     /protein_id="HAY9053554.1"
                     /translation="MNIRIWSGILPCMDISALNTTNDIEKLRAMALAMVQEVMSENAE
                     KERELLEKSRRIQLLEEMLKLVRQQRFGKKCETLAGMQRSLFEEDVDADIAALTAHLD
                     KLLPQSPEEDEKASRSRPIRKPLPVHLPRVEKMIQPDTDHCPECDEPLHYIRDAVSEK
                     LEYIPAHFVVNRYVRPQYSCPCCQKVFSGEMPAHILPKSAVEPSVIAQVIINKYGDHL
                     PLYRQQQVFARSDVGLPVSSMADMVGAAGAALSPLAALLHRELINRPVVHADETTLKI
                     LNTKKGGKSCSGYLWAYVSGERTGPSVVCFDCRTGRSHEYPENWLQGWGGTLVVDGHK
                     AYRTLANKVPEITLAGCWAHARRGFADLYKISKDPRAAIAVKKIAGLYRLEKKISSRP
                     VEKIRQWRQRYARPILEELWSWLEEQEPQCSPGKALHKAIAYALSHRVELSRFLEDGA
                     VPLDNNVCERAIKNVVLGRKSWLFAGSQMAGERAAQIMSLLETAKRNGLEPHAWLTDV
                     LMRLPEWPEERLAELLPLEGFTFSG"
     gene            complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JN001_002350"
     CDS             complement(3131..3523)
                     /gene="tnpB"
                     /locus_tag="JN001_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000950651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY9053555.1"
                     /translation="MLSPDNVFIAIKPVDMRRGIDSLTQYIQDELRSTWHEGAAFVFV
                     NKVRSRIKVLRWDKHGVWLCTRRLHKGSFRWPRANDAAWHLTPDEFNWLIAGVDWQQV
                     KGHDLTKWVWQNEPELRPENTKNTLLTQ"
     gene            complement(3510..3839)
                     /locus_tag="JN001_002351"
     CDS             complement(3510..3839)
                     /locus_tag="JN001_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001325657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY9053556.1"
                     /translation="MSKPRWTIEQKRQHVAAWRASGLTRQQYCELNDIPFTSLREWPQ
                     DVAKAERRANEPTVLPVHIAPPLHADVPQPVTNEPVTLFLPGGVRMCCQPSQLTDVFR
                     ALKYAQS"
     gene            3884..7144
                     /locus_tag="JN001_002352"
                     /pseudo
     CDS             3884..7144
                     /locus_tag="JN001_002352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_304285.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
     gene            7137..7478
                     /locus_tag="JN001_002353"
     CDS             7137..7478
                     /locus_tag="JN001_002353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053557.1"
                     /translation="MAEIKTLHLVPREGMQVSEKPSVARVRFGDGYEQRRPTGLNARL
                     KTFQAVFRVTDEATRRWLEEFLSWHGGYRAFLWRPPKHNRTVRVVCREWSVTDNARYS
                     DFSCTIEQVVN"
     gene            7478..8176
                     /locus_tag="JN001_002354"
     CDS             7478..8176
                     /locus_tag="JN001_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
                     /protein_id="HAY9053558.1"
                     /translation="MQDIHEESLSESVKSEQSPRVVLWEIDLTVQGGERYFFCNELNE
                     KGEPVTWQGRKYEAYPIDGSGFEMNGRGSSARPSLTVSNLFGLVTGMAEDLQSLVGAT
                     VVRRRVYARFLDAVNFVAGNPEADPEQELSDRWVVEQMSQLTAMTASFVLATPTETDG
                     ALFPGRIMLANTCMWTYRSDECGYTGGAVADEFDKPTTDIRKDRCSKCMRGCELRRNV
                     GNFGGFLSINKLSQ"
     gene            8187..8930
                     /locus_tag="JN001_002355"
     CDS             8187..8930
                     /locus_tag="JN001_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053559.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVISTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGELPWLSEADRRLQIKSALPWWLVCRGEIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIDMPDFHREDDWWRNGQNLYLDNMAVT
                     GFYRVPLSSAPPGDILLCCFGASVPNHATIYCGNGELLHHLPEQLSKRERYSEKWQRR
                     THSVWRHRHWHASAFTGICNDLAAASACM"
     gene            8828..9508
                     /locus_tag="JN001_002356"
     CDS             8828..9508
                     /locus_tag="JN001_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000246273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY9053560.1"
                     /translation="MATTNAFCLASPPLARICLHGDLQRFGRRLSLYVNTAAEAIRAL
                     SMQMPGFRRQMNEGWYQIRIAGDDTAPEAVYARLHEQLGEGTVIHIVPRLAGAGKGGL
                     QIVLGAAAIVGSFFTAGASMALWGSALAAGGFSATTMLFSLGASMILGGVAQMLAPKA
                     KTPDYRATDNGRQNTYFSSLDNMIAQGNPMPVPYGEMLVGSRRISQDISTRDEGGGGK
                     VVVIGRQG"
     gene            9749..13222
                     /locus_tag="JN001_002357"
     CDS             9749..13222
                     /locus_tag="JN001_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY9053561.1"
                     /translation="MGKGGGRAHTPREAKDNLKSTQMMSVIDAIGEGPIEGPVKGLQS
                     ILVNKTPLTDTDGNPVIHGVTAVWRAGEQEQTPPESFESSGSETVLGVEVTRAKPVTR
                     TITSANIDRLRVTFGVQSLVETTSKGDRNPSSVRLLIQLQRNGNWVTEKDVTINGKTT
                     SQFLASVILDNLPPRPFNIRMVRETADSTTDQLQNRTLWSSYTEIIDVKQCYPNTAIV
                     GMQVDAEQFGGQQMTVNYHIRGRIIQVPSNYDPEKRTYSGIWDGSLKPAYSNNPAWCL
                     WDMLTHPRYGMGKCLGAADVDKWALYAIGQYCDQTVPDGFGGTEPRMTFNAYLAQQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDVVWPYTNSDVVVDDNGVGFRYSFSAL
                     KDRHTAVEVNYTDPQNGWQTSTELVEDPEAILRYGRNLLKMDAFGCTCRGQAHRAGLW
                     VIKTGLLETQTVDFTLGSQGLRHTPGDIIEICDNDYAGTMTGGRVLSIDAATRTLTLD
                     REVTLPETGTSAVNLINGSGKPVSVDITAHPAPDRIQVSTLPDGVETYGVWGLSLPSL
                     RRRLFRCVSVRENTDGTFAITAVQHVPEKEAIVDNGARFEPQSGSLNSVIPPAVQHLT
                     VEVSAADGQYLAQAKWDTPRVVKGVRFSLRLTSGSGEDSRLVTTAITADTEHRFSGLP
                     LGEYTLTVRAINSYGQQGEPATTTFRINAPAKPATIELTPGYFQITAVPRLAVYDPTV
                     QFEFWFSEAKIADTSQVETSARYLGTGSQWSVSGPHIKPGKDFWFYVRSVNLVGKSAF
                     VEASGRASNDAEGYLGLFREKIGKLHLAQGLWELIDNSQLADEMAEMKTTITETRNEI
                     TQTVSKTLEDQSATIQQIQRVQKDTNDDLAALYMLKVQKTKNGIPYVAGIGAGIEDTD
                     GQPLSNILLLADRIAMINPEDGNTTPLFVAQGNQLFMNDVFLKRLFAVSITSSGNPPT
                     FSLTPEGRLTARNADISGNVNANSGTLNNVTINENCRVLGKLSANQIEGDLVKTVGKA
                     FPRDSRAPERWPSGTVTVRIYDDQPFDRQIVIPAVAFSGAKHEREHTDIYSSCRLIVR
                     KNGAEIYNRTALDNTLIYSCVIDMPAGHGHMTLEFSVSAWLVNNWYPTASISDLLVVV
                     MKKATAGISIS"
     gene            13290..13889
                     /locus_tag="JN001_002358"
     CDS             13290..13889
                     /locus_tag="JN001_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY9053562.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLHARTNAPG
                     SDNLNGINVKYRYEFTDALGLITSFSYANAEDEKKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDGRHSNTSLAW
                     GAGVQFNPTESVAIDIAYEGSGSGDWRTDGFIVGVGYKF"
     gene            13954..14950
                     /locus_tag="JN001_002359"
                     /pseudo
     CDS             13954..14950
                     /locus_tag="JN001_002359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000216474.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase S74"
     gene            14963..15361
                     /locus_tag="JN001_002360"
     CDS             14963..15361
                     /locus_tag="JN001_002360"
                     /inference="COORDINATES: protein motif:HMM:NF025253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber domain-containing protein"
                     /protein_id="HAY9053563.1"
                     /translation="MLTTANTWTQAQTFNGGINGNLTVTGNGSFNDIQIRSDKRNKRN
                     LVKLDNALDRLEALTGYLYEIQYSADGWQTSVGLIAQDAQKALPELVTEDADVISGEK
                     RLRLNYNGIIALLVEGFKTLRHEIKELREK"
     gene            15447..15959
                     /locus_tag="JN001_002361"
     CDS             15447..15959
                     /locus_tag="JN001_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053564.1"
                     /translation="MGVTSGWVGSSAKSETGEQWMGAAGTKLGLSKPFMMSQMVGRTM
                     GCKIATEYYKWKSSDKVDNWGAVGADWPLEEKSKGTITNAASCGSGRLVGAVVTLSHF
                     LTNSTPTAAVYLAGGKAGNITVNVGGATQTMIYQGVVSGFQYYWSGSVSSAFVEAMKK
                     TGVPQDLKIS"
     gene            16035..16247
                     /locus_tag="JN001_002362"
     CDS             16035..16247
                     /locus_tag="JN001_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001114260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4376 domain-containing protein"
                     /protein_id="HAY9053565.1"
                     /translation="MPEKFFRTDADNNDVPMTAASWMALSEATEQAMFAKGVEINTRQ
                     LQMKAEVEALTDLKAIRSYVVGWPAG"
     gene            complement(16389..16713)
                     /locus_tag="JN001_002363"
                     /pseudo
     CDS             complement(16389..16713)
                     /locus_tag="JN001_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414822.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            complement(16849..17097)
                     /locus_tag="JN001_002364"
     CDS             complement(16849..17097)
                     /locus_tag="JN001_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY9053566.1"
                     /translation="MRIEICIAKEKMTKMPTGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(17452..>17798)
                     /locus_tag="JN001_002365"
     CDS             complement(17452..>17798)
                     /locus_tag="JN001_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY9053567.1"
                     /translation="PAKVLPENWWQHPAALGATDSDIEIIKRQWGAFYGTDLELQLRR
                     RGIDTIVLCGISTNIGVESTARNAWELGFNLVIAEDACSAASAEQHNNSINHIYPRIA
                     RVRSVEEILHAL"
BASE COUNT         4195 a         4291 c         5438 g         3874 t
ORIGIN      
        1 tcctggcgga agtgcgtcag cacacctggt catccggtac caacggtgtg gtggctgcaa
       61 cgttctcact gcgtctgaaa ggcaaaccgg tgtcctttgt ggtaccgctg gcgtttgtga
      121 aaaatctgga taagacactt accgtgaata ccggtgcgct gctgacaatg tcagtcagtg
      181 ccaacggggg aatgccgccg tataaatacg cctggaagaa ggatggtcag ccggttgacg
      241 ggcagacgac agacaccttc agtaagccag gtgcgcagtc cgctgatgcg gggaaatata
      301 cctgcgtggt gaccgattcg gcagagaaag cacagagtgt gacgtctgtt gaatgcaccg
      361 tgacagtgag cgcagctgcc ggataagggg atgggtcatc atgaaaaagg atctgaaaac
      421 gctggcgctg gccagactgt cagggtttcg tcataaaacg gtgaaggtgc cggaatgggg
      481 gaatgtcagc gtggtgctgc gggagccttc ggcagaggcc tggtatctgt ggcaggaagt
      541 gctcaatggt gatggagagg atgacgatac cctgtcggtg gtggcgaaaa cccgccgtaa
      601 cttggaagcg gatgtgacgc tgttctgcga tgtcctgtgt gatacggacc tgcagcgggt
      661 gttcactccg gacgaccgtg agcaggtgct ggccgtctat ggtccggtac atgcccggtt
      721 gctgcgtcag gcactggaac tgatcgctga tgcagagtcg gccagaaaaa agtagcccgc
      781 ccggaaattc gctttctgat gcgacttgcg ctccgtctgg ggcgcacctt atccgaactg
      841 cgccacagcc tgagtgcgag cgaggcgatg atgtggatgg agttcgacag gatatccccg
      901 ctgggtgatg agcgcgggga tatccgtaat gcacagatcg tgaaagcggt tttcggggca
      961 caggggatga atgttgcact gaaggacgtc atgctctgct ggggcgagga tgaggataag
     1021 ccggaggtgg atccgtttgc ggcgctggaa gacgcgctga gctttgcagc acagtcatga
     1081 atgatgagaa ccgctgaggc ggttttttta cgcccggaga aaggtgaatg gcgacgttac
     1141 gtgaactgat tatcaaaatt gtaagcttcc ggggaactca tattgacgcg tttttcaggc
     1201 gcgcgtcatc ggcggcgcat acgaacgctc gtggtttgat aacggttgat ttattttgtt
     1261 gcacagaggc gatcgccagg caggtaccgg aggcgggctc tgaagtactg agtagcgtga
     1321 tcgcgtcagg ccgcgaagta ctgactcggg gattaattgc aggtgatgat gtactgaccc
     1381 gggaatgact ccgggctgat tcaggttctt attcgctgtc agcccgcgtg gttgctggtc
     1441 tggctcattt cctgccgtca ggagttcaac tcccgactgc aggttatggc ccggtgcacg
     1501 aacacctgac ggcaggtatc actcacccgg agaaggtaaa tccctcaaga ggcagcaact
     1561 ctgccagtcg ctcctccggc cactccggca gacgcatcag gacgtctgtc aaccaggcat
     1621 gcggctccag accgttgcgt ttcgcggttt ccagcaagct cattatttgc gcggcgcgtt
     1681 ctcccgccat ctgcgaaccg gcgaacagcc acgattttct gcccagaacc acgtttttga
     1741 tggcccgttc acacacatta ttatccagcg gcaccgcacc atcttccagg aagcggctca
     1801 gttccacgcg atgagacagc gcataggcaa tagctttgtg taatgccttt cccggagaac
     1861 attgcggttc ctgctcttca agccatgacc acagttcttc cagtatcgga cgggcataac
     1921 gctgtcgcca ctggcggatt ttttccacgg ggcggctact gatcttcttc tcaagacggt
     1981 acaaccccgc gattttcttc acggctatgg cagcccgtgg atctttactg attttataca
     2041 ggtcggcgaa gcccctgcgg gcatgggccc agcatccggc cagcgtgatc tccggcactt
     2101 tgtttgccag agtccggtaa gctttatgtc cgtcgacaac cagcgtcccg ccccagccct
     2161 gaagccagtt ttcaggatac tcatggctac gtccggtccg gcagtcgaag cacacaactg
     2221 acggtcccgt cctttctcca ctgacgtatg cccacagata accggagcag gatttaccgc
     2281 ctttcttcgt gttcaggatc ttcagggtag tctcatctgc atgcaccacc ggacggttta
     2341 tcaactcgcg atggagtaac gccgccaggg gagataatgc ggcacccgcc gcgccaacca
     2401 tgtcagccat cgaactgacg ggcagcccga catctgaacg ggcaaagacc tgttgctggc
     2461 gatacagagg caggtggtca ccgtatttat tgatgatcac ctgtgcgatg actgatggct
     2521 caacggcact tttcgggagg atatgtgccg gcatttcacc gctgaacacc ttctggcaac
     2581 agggacaact gtattgcgga cggacataac ggttcaccac aaagtgagcg ggaatatact
     2641 ccagcttttc actcaccgca tcgcggatat agtgcagcgg ctcgtcacat tcagggcaat
     2701 ggtcagtgtc cggctggatc attttttcca cccgtggaag atgaaccggt aagggtttgc
     2761 gtatcgggcg tgaacgggac gctttttcat cttcttcagg ggattgcggg agcagtttat
     2821 ccagatgtgc ggtaagcgcg gcgatatcgg catcaacatc ctcttcgaat agggagcgtt
     2881 gcataccagc cagcgtttca catttttttc cgaagcgctg ttgacgaacc agtttcagca
     2941 tttcttccag aagctggatg cgccggcttt tctccagtaa ttcccgctct ttttcggcat
     3001 tctccgacat gacttcttgt accatggcaa gtgccatagc acgcagtttt tcgatgtcat
     3061 tcgtggtgtt gagagcggag atatccatac aggggagtat accactccag atacggatat
     3121 tcattatttt tcactgagtt agcagtgtat ttttcgtgtt ttcagggcgc agttcaggtt
     3181 cattctgcca gacccatttc gtcaggtcat gtcccttaac ctgctgccag tcaacaccgg
     3241 caatcagcca gttaaactcg tcgggagtga ggtgccaggc agcgtcattt gcacgtggcc
     3301 agcggaagct gcctttgtgc agacggcggg tacacaacca caccccgtgt ttatcccacc
     3361 ggagaacttt gatacgcgaa cggactttgt taacaaagac gaaggcggct ccctcatgcc
     3421 atgtcgaccg gagttcatcc tgtatatact gcgtcagtga gtcgatgccc cggcgcatgt
     3481 caacaggttt aattgcgatg aagacattat caggactgag catatttgag tgccctgaag
     3541 acatcggtaa gttgtgacgg ctgacagcac atccgtactc caccgggaag gaagagcgtg
     3601 actggctcat tcgtgacggg ctgtggtaca tcagcatgca gtggtggcgc aatatgaacg
     3661 ggaagaacgg tcggttcatt tgcccggcgt tcagcttttg cgacatcctg cggccattcg
     3721 cgaagtgatg tgaagggaat atcgttgagt tcacagtatt gctgacgtgt aagaccactg
     3781 gcgcgccagg cagcaacgtg ctgccttttc tgttcaatgg tccatcgggg ttttgacatc
     3841 gattatctcc ggtaagttgg tgaatggatg tcggtaatac taactgaccg aagatccctg
     3901 tgaagatgac ttccccgtaa cgacactcaa aatttcggca aattcacagt cattccagtc
     3961 ggagatccag cgggcgtccc gtatgggcag tgaatattac cggaccctgc agaatggcgg
     4021 acgtcatgcc gctgctgccg cacgggaaca gcgccgcgcc cttgcagaac tgaacagtca
     4081 gttgacggaa attcgcggtt ctgctgtcgg aatggctggc gcatttgccg gtgcctttgc
     4141 caccggacac ctgatttcgc tggccgatga gtggggttcc gtgaatgccc gtctgaaaca
     4201 ggcatctcag tcatcggatg aattctcgtc atcacagaaa gtgctgatgg atatcagtca
     4261 gcgaacaggt accgcgtttt cggataatgc ggccctgttt gcccgttcgg ctgcctcgat
     4321 gcgtgaatat ggttacagtg ctgatgatgt gctgaaggtg acggaggcca tttcgacagg
     4381 actgaaactg tcaggggctg gagttgcgga atccggttcg gtgatcaccc agttcagcca
     4441 ggcactggca cagggtgtac tgcgtggcga agaatttaat gctgttaacg aaaatggcga
     4501 ccgggtgatc cgcgcgcttg ctgcggggat gggtgtggcc cgtaaagatc tgaaggcaat
     4561 ggcggatgac ggaaaactga cagcggataa agtggtccct gcgttaatca gccagctggg
     4621 gatattacgt gatgaatatg cggccatgcc ggaaacggtt tccggtagta tcacgaaggt
     4681 ggaaaacgcc tttatggcct gggtgggcga agtgaatgag gcctgcgggg tgacaaaaac
     4741 gctctccggc gtgctgaacg gtgttgccgg acagattgat aatgtggcaa cagctgtggg
     4801 ggcgctggtt gccgtcgggg ttgcccggta ctttggcaat atggcctccg gagcgatgtc
     4861 tgccacggca ggacttgtga cggctgcacg taatgaagtt gcactggcgg aagcacagtt
     4921 caggggaacg cagattgcca cggcgcgggc aagggcagcc gtgtaccgtg ctcagcaggc
     4981 cgtggcggca gcccgcggga cggagatgca gattgctgca gaggcccgtc tggcggccac
     5041 acaggaacgc ctgaacagaa atattgctgc cagaagcgcc gcccagaatg cgctgaacag
     5101 tacaacggcg gtgggctcac gtctgatgag cggtgcgctg gggctggttg gtggcgtacc
     5161 cggactggtg atgctggggg ctgcagcatg gtacacgctg taccagaatc aggagcaggc
     5221 ctgggagtct gcgcgccagt atgcactgac gatagatgaa atcgcgcata aaacgccgtc
     5281 aatgtctttg cctgaagcct cagataatga aggacgaaca cgggcggcgc tgacagagca
     5341 gaaccggctg attgatgaat aggctagtcg ggtgaaatcc ctgcaggaaa aaatcgcagg
     5401 atatcagtat gttctggcga acccgggctg gacgaccggt gacggattca tgataaacca
     5461 tctgacctcg gtgaagaccg taacggaagg gcttgctcag gcaacagagc agcttgccgt
     5521 tgagcagtcc cgtctggcac tgatgcagga aaaagcgcag tccattcagg atgtgcttgc
     5581 cgggctggaa gaccgtcgtg tggcgttaat tcgtcagcag gcggcagagc agaataaggt
     5641 gtaccagtcc atgctggtta tgaacggtca gcatacggaa ttcaaccgtc tgctggggct
     5701 gggtaatgaa ctgcttcagc agcggcaggg actggtgaat gtgccgttac ggctgccaca
     5761 ggccactctg gatgataaac agcagagtgc cctgacaaaa acagagcgtg agctggccct
     5821 gtccagactg aaaggggaag aaaaagagcg tgtccgactg gggtatgcgg cggatgacct
     5881 cggttttgtg ggtgatccgt atcaggaggc gagacaacgt tatatcagta atgccctgga
     5941 agcctggcgc aataacgagg cgaataaacc caaatcccgg ggtggaaaat cagagacgga
     6001 aaaagcggaa gacagttttt cccggctgct gaagcagcag aaagagcaac tggcactggc
     6061 ggggcagaat acagagctgg cgaagctgaa ataccagact gcgcagggcg aactgaaaac
     6121 cctgacggag atgcagaagc aggaactgct gcgcaatgcg gccctgattg accagcaaaa
     6181 aatccgggag cagttgcggt cccgggaaga gaccctgaag aatgataatg tggctgctcg
     6241 tgcatcaaat gaagcggaac tgctggggta cgggcaggga gagcggctcc gtgaacgcat
     6301 gcgggagttg cagcagatcc gcgacagttt ccgccagaag gatgcggacc ttcagtctca
     6361 gtatcagacc ggggatatca gtgaggattt ttacagacag gctctggcac agaacgcgca
     6421 gtatctgagt gaacgtctga aagagcagga agccttttat gccgaatcgg atgtgcagcg
     6481 tgcggactgg cagaaagggc tgcaggaggg attcagtaac tgggtggata atgcgtccga
     6541 ttacgcctca caggcagcac agcttgcgac ggagggtatc tcagggatgg tgaataacat
     6601 cacggagatg ctgaacggaa ataaagtgga atggcgcagc tgggcctcat cagtgctgca
     6661 ggaaatatca aaagttctta tgaatgccgc gattgtcaac gggatcaaga cggcggcaaa
     6721 cagtatgtcc ggagcgggag gatttatcgg cagtattggt agctggctgg gcggtgcggt
     6781 ggccaatgca aaaggcggtg tgtatacctc ggcaaacctg agtgcgtaca gcaacagtat
     6841 tgtggatacg cccacgtact ttgcctttgc aaaaggggcg ggactgatgg gggaggccgg
     6901 tcctgaagcc attatgcccc tgacccgggc ggcggatggc tcgctgggtg tgcgagcggt
     6961 gggcagtatg aacggcagtg caggtctggt gtattccccg gtctaccata tcgccattca
     7021 gaatgacggg actaatggcc agatagggcc ggaagctgcg ggcagccttg tgcaactgat
     7081 tgaccagcgg gtgcaggcgg tgatgctgtc catgcgacgt gacggaggaa tgctgagtgg
     7141 ctgagataaa aacgctgcat ctggtcccgc gtgaagggat gcaggtgagt gagaaaccgt
     7201 cggtggcgag ggtacggttt ggtgacggtt atgaacagcg ccgcccgacg ggacttaatg
     7261 cccgactgaa gacgtttcag gcggtgttcc gggtgacgga tgaggcgacc cggcgatggc
     7321 tggaagagtt tttatcgtgg catggtggtt accgtgcctt tttgtggcga ccgccgaaac
     7381 ataaccggac ggtgagggtg gtatgccggg agtggagcgt cacagataac gccaggtaca
     7441 gtgatttcag ttgtacgatt gagcaggtgg tgaactgatg caggatattc acgaagaaag
     7501 tctgagcgag tcggttaaat cagagcagtc accgcgggtg gtactctggg aaattgacct
     7561 gacggtgcag ggtggtgagc ggtatttttt ctgtaatgag ctgaatgaaa aaggggagcc
     7621 ggtcacctgg caggggcgta agtatgaggc atacccgatt gacggcagcg gctttgagat
     7681 gaacggccgg ggcagcagtg ccagaccgtc gctgacggtg tccaatctgt tcggtctggt
     7741 caccgggatg gcggaagacc tgcagagtct ggtgggggcc acggtggtcc gccgccgggt
     7801 gtatgcccgt tttctggatg cggtgaattt cgttgcgggc aatccggagg cggacccgga
     7861 gcaggagctg agtgaccgct gggtggtgga gcagatgtcg cagctgacag ccatgacggc
     7921 ctcgtttgtg ctggctacac cgaccgagac ggacggggcg ctgtttcccg gtcgtatcat
     7981 gctggcgaac acctgtatgt ggacctaccg ctctgatgag tgtggttaca cgggcggggc
     8041 tgtggcggat gagttcgata aacccaccac ggatatccgt aaggacagat gcagcaagtg
     8101 catgcgcggg tgtgaactgc gcaggaatgt cggcaatttt ggcggtttcc tttccattaa
     8161 taaactttcg cagtaaatcc cgatttatga cacagactga atcagcgatt ctggcgcatg
     8221 cccggcggtg tgcgcctgcg gagtcgtgcg gcttcgtgat aagcacgccg gagggggagc
     8281 ggtatatccc ttgtgtgaat atttctgcag agccggaggc gtattttcgt atcgcaccgg
     8341 aagactggct gcgggcagag atgcaggggg agattgtggc actggtccac agtcatcccg
     8401 gtgagctgcc ctggctgagc gaggctgacc ggcggctgca gataaaaagc gcactgccct
     8461 ggtggctggt ctgccggggg gaaattcata aattccgctg tgtgccacat ctgacaggac
     8521 ggcgctttga gcacggggtg acggactgtt acacgctgtt ccgggatgca taccatctgg
     8581 cgggaattga tatgccggat tttcatcgcg aggatgactg gtggcgcaac ggccagaacc
     8641 tgtacctgga caatatggcg gtcaccggct tttaccgggt gcccctgtcc tctgcaccgc
     8701 cgggcgatat tctgctgtgc tgctttggtg cttcggtacc gaaccatgcc accatttact
     8761 gcggcaacgg tgagctgctt caccatctgc ctgaacaact gagtaaacgg gagaggtatt
     8821 ccgaaaaatg gcaacgacga acgcattctg tctggcgtca ccgccactgg cacgcatctg
     8881 ccttcacggg gatttgcaac gatttggccg ccgcctcagc ctgtatgtga acacggcagc
     8941 ggaagccatt cgcgccctgt cgatgcagat gccgggcttt cgccgtcaga tgaacgaagg
     9001 ctggtaccag atacgtattg ccggtgatga cacggcaccg gaggcggtgt atgcccgtct
     9061 tcacgaacag ctgggtgagg gaacggtcat ccacattgtg ccgcgactgg ccggggccgg
     9121 aaagggtgga ctgcagattg tgttgggggc ggcagccatc gtgggctctt tcttcactgc
     9181 cggggcatca atggcgttat ggggttcagc cctggcagcc ggtggttttt ctgccaccac
     9241 gatgctgttt tcacttggag ccagcatgat tctgggcggt gtggcccaga tgctggcccc
     9301 gaaggcaaaa acaccggatt accgcgcaac ggataacggc agacagaaca cgtacttttc
     9361 ctcgctggat aacatgattg cccaggggaa cccgatgccg gtgccttacg gggaaatgct
     9421 ggttggctcc cgccgtatat cccaggacat cagcacccgt gatgaaggcg ggggcggaaa
     9481 ggtcgtggtt atcgggcgac agggataaaa cataaaaaaa tcccgcagtg atcgcggagc
     9541 tgcggggaca gacaaatgaa gatcaatgtg aaggagttgt ttttgttact cgggcaaaaa
     9601 aacactaacg cagcgaaatt ataagcgcca cagtcagtgt gtgaaaatgt gaagatattc
     9661 agaaatttta ttccgtcatg acgcaggcac ccggtgaggt gcctgttgtt tttgtgagtg
     9721 aacaattatc acggtaagag gtgatgtaat gggcaaaggt ggcggcaggg cgcacacacc
     9781 gcgtgaggcg aaagacaatc tcaaatccac gcagatgatg agcgtgattg atgcgattgg
     9841 tgagggaccg atagaaggcc cggtgaaagg cctgcagagt attctggtga acaaaacccc
     9901 gctgacggac acggacggta atcccgtgat acacggtgtg accgcggtct ggcgtgccgg
     9961 ggagcaggag cagacaccac cggaaagctt tgagtcctcc ggctctgaaa ctgtactggg
    10021 tgtcgaagtg accagggcaa aaccggtaac acgcaccatt acgtcagcga acattgaccg
    10081 cctgcgggtg accttcgggg tgcagtcact ggtggagacc acgtcaaagg gtgaccgtaa
    10141 tccgtcctct gtccgtctgc tgattcagtt acagcgtaac ggtaactggg tgacagaaaa
    10201 ggatgtcacc attaacggca agaccacctc acagttcctt gcgtcggtga ttctggataa
    10261 tctgcctccc cgccccttta acatccggat ggtcagggag acggcggaca gcaccacgga
    10321 ccagctgcag aacagaacgc tgtggtcgtc atacaccgaa atcatcgatg tgaaacagtg
    10381 ctacccgaac acggccattg tggggatgca ggtggatgcg gagcagtttg gtggtcagca
    10441 gatgacggtg aactaccata tccgcggtcg catcatccag gtgccgtcaa actatgaccc
    10501 ggaaaaacgc acgtacagtg gtatctggga cggcagtctg aaaccggcat acagcaacaa
    10561 cccggcctgg tgcctgtggg acatgctgac tcacccgcgc tacggcatgg gaaaatgtct
    10621 gggggcggcg gatgtggaca agtgggcgct gtatgccatc gggcagtact gcgaccagac
    10681 ggtcccggat ggtttcgggg ggaccgagcc gcggatgacc tttaatgcgt acctggcaca
    10741 acagcgtaag gcgtgggacg ttctcagtga tttctgctct gcgatgcgct gtatgccggt
    10801 atggaacggt cagacgctga cgttcgttca ggaccgcccg tcggatgtgg tgtggccgta
    10861 caccaacagc gatgtggtgg tggatgataa cggcgtggga ttccgctaca gcttcagtgc
    10921 cctgaaggac cggcacacgg cggtggaggt gaattacacc gacccgcaga acggctggca
    10981 gacctccacg gaactggtgg aagacccgga agccatactg cgctacggac gcaacctgct
    11041 gaagatggat gcgtttggct gtacctgccg cggtcaggct caccgtgcag gtctgtgggt
    11101 gataaagacc ggactgctgg aaacgcagac ggtggacttc acgctcgggt cacaggggct
    11161 gcgtcacaca ccgggtgaca ttattgaaat ctgtgataac gactatgctg ggactatgac
    11221 cggcggacgt gtcctgtcca ttgatgctgc cacccgcacc ctgacgctgg accgtgaggt
    11281 taccctgccg gagacaggta catcggcggt gaacctgatt aacggcagtg gtaagccggt
    11341 gagtgtggac atcaccgcac accccgcgcc ggaccggata caggtcagta ccctgcctga
    11401 tggtgtggag acatacgggg tgtggggact ctccctgccg tcactgcgcc gtcgcctgtt
    11461 ccgctgtgtc tccgtccggg aaaacacgga tggcaccttt gccatcacgg cggtgcagca
    11521 cgtaccggaa aaagaagcca tcgtggataa cggtgcccgc tttgagccgc agtcaggctc
    11581 cctgaacagc gtcatcccac cggcagtgca gcacctgacg gtggaggtga gcgcagctga
    11641 cggccagtat ctggcacagg cgaaatggga cacgccgcgg gtggtgaagg gggtgcgctt
    11701 cagtctgcga ctgaccagcg gaagcggaga agacagccgt ctggtgacca ccgctatcac
    11761 tgcggataca gagcatcgtt tcagtggtct gccgctcggg gaatacaccc tgacagtcag
    11821 ggcaattaac agttatggcc agcagggcga accggccacc accaccttcc ggattaacgc
    11881 gccagcaaaa cccgccacca ttgaactgac gccggggtat tttcagataa cagcggtacc
    11941 gcgtcttgcg gtgtatgacc cgacggtaca gtttgagttc tggttttcgg aggcaaaaat
    12001 cgcagacaca tctcaggtgg aaacctctgc ccgttatctg gggaccggca gtcagtggag
    12061 tgtatccggc ccgcacatta agcccgggaa ggatttctgg ttttacgtgc gcagcgtcaa
    12121 cctggtgggg aaatctgctt ttgtggaggc cagtggacgg gccagcaatg atgcagaagg
    12181 gtatctgggg ctgtttcggg aaaaaatagg aaaactgcat ctggctcagg ggctgtggga
    12241 gctgatagac aacagccagc ttgcggatga gatggcggag atgaagacca ccatcaccga
    12301 aacccgcaat gaaatcacac agacggtcag taaaacgctg gaggaccaga gcgccaccat
    12361 acagcagata cagcgcgtgc agaaggacac aaatgatgac cttgctgcac tttacatgct
    12421 gaaggtacag aaaacaaaaa atggcatacc ctatgttgcc ggtattggag cggggattga
    12481 ggatactgat ggccagcccc tgagcaacat actgctgctg gctgaccgta ttgcgatgat
    12541 taacccggag gacggcaaca ccacgccgtt atttgtggcg caggggaatc agttgttcat
    12601 gaacgatgtg ttcctgaagc ggctgtttgc ggtgagtatc acctcgtccg gcaatccccc
    12661 gacgttttcc ctgacgccgg agggcaggct gaccgcaaga aatgctgata tcagcggtaa
    12721 cgtgaatgcg aactccggga cgctcaacaa cgtcacgatt aacgagaact gccgggttct
    12781 gggaaaactg tccgcgaacc agattgaagg cgatctcgtt aaaacagtgg gtaaggcttt
    12841 tccgcgggac tcccgggcac cggagcggtg gccatcaggg accgttaccg tcaggattta
    12901 tgacgatcag ccttttgacc ggcaaattgt tattccggcg gtggcattca gcggcgctaa
    12961 gcatgagaga gagcatactg atatttactc ctcatgccgt ctgatagtgc ggaaaaacgg
    13021 tgctgaaatt tataaccgta ccgcgctgga taatacgctg atttacagtt gcgttattga
    13081 tatgcctgcc ggtcacggtc acatgacgct ggagttttcg gtatcagcat ggctggtgaa
    13141 taactggtat cccacagcaa gtatcagcga tttgctggtt gtggtgatga agaaagccac
    13201 cgcaggcatc agtatcagct gaattttata acccatatac gggcgccaga aatggcgcct
    13261 tttttattgc agaaaagcga gaggtaatta tgcgtaaagt ttgtgcagcc attttgtccg
    13321 cagccatctg tctggctgta tccggtgcgc ctgcatgggc gtctgaacat cagtccacac
    13381 tgagcgcggg gtatcttcat gcccgtacga acgctcccgg cagcgataat ctgaacggga
    13441 ttaacgtgaa ataccgttat gagtttacgg acgcgctggg gctgattacg tccttcagtt
    13501 atgccaatgc tgaagatgag aaaaaaacgc actacagcga tacccgctgg catgaggatt
    13561 ccgttcgtaa ccgctggttc agcgtaatgg cggggccgtc tgtgcgcgtg aatgaatggt
    13621 tcagcgcgta tgcgatggcg ggtgtggctt acagccgtgt gtcgactttc tccggggatt
    13681 atctccgcgt aactgacaac aaggggaaaa cgcacgacgt gctgaccgga agtgatgacg
    13741 gtcgccacag caacacgtct ctggcgtggg gggctggcgt gcagtttaac ccgaccgaat
    13801 ccgtggccat tgatattgct tatgaaggtt ccggcagtgg cgactggcgc actgacggtt
    13861 tcatcgtggg tgtcggctat aaattctgat tagccaggta acacagtgtc atgacagccc
    13921 gccggttcag gcgggctttt ttgtggggtg aatatgacag taaagatttc tggtgtactg
    13981 aaagacggca caggaaaacc ggtacagaac tgcacaatcc agctgaaagc aaaacgtaac
    14041 agtaccacgg tggtggtgaa cacgctggcc tcagaaaatc cggatgaagc cgggcgttac
    14101 agtatggacg ttgagtatgg tcagtacagc gttattctgt tggtggaggg attcccgccg
    14161 tcacatgccg ggactatcac cgtgtatgaa gattctcaac ccggtacgct gaatgatttt
    14221 ctcggtgcca tgactgagga tgatgcccgt ccggaggcac tgcgtcgctt tgaactgatg
    14281 gtggaagagg tggtgcgtaa cgcagaggag gcgaagaaga atgccggaga ggcggagacg
    14341 tcagcgagga atgccggcat atcagccagt caggcagaag agagcgctgc aaatgctgac
    14401 acttcagcag gggatgcatc ggagtcagcc cggcaggcgg cagaaagtgc agcctcagca
    14461 aagcagtcag aggaggcgtc ctcgtcctcg gcctctgcgg ccgctcaaaa agccagtgag
    14521 tcattacaaa gtgcaacaga tgctgagttg tcaaaaaaga cggcagaaag tgcagccggt
    14581 aatgcagtca gggatgcaac gaccgcaaca gaaaaagccc gggagtcagc agaaagcgca
    14641 cagtcagcgg aacaaagcag gatagcggcg gaagaggccg taaaccgaat ccccaccgtg
    14701 gtgggacctc ccgggccaaa gggggaaccg gggcccgcgg gtcctcaggg gccgaaggga
    14761 gataaaggag agcgtggcga caccggcccg gcaggggcca aaaggtgaca aaggcgatcc
    14821 gggagtggct ggaccagcag gtccggcagg tgcgccgggg ccgaaaggcg ataaaggtga
    14881 tccgggagta gcaggtccag caggtccggc ggggccacag ggaccgaagg gagacacagg
    14941 agcccccggg caaggaacag aactgcttac tactgccaat acatggactc aggcacaaac
    15001 ttttaatggt ggtattaatg gcaatttgac ggtgaccgga aacggctcat ttaacgatat
    15061 tcagatccgt tcggataaac gcaacaagcg aaatctggta aaactggata atgcgttaga
    15121 tcgtctggag gcacttactg gttatcttta cgagatacag tactctgccg acggttggca
    15181 aacgtcggtt ggtttaattg ctcaggatgc acaaaaagca ttgcctgaac tggtaactga
    15241 agacgcagac gttatatctg gtgaaaaacg tctgcgtctt aactacaacg gcataattgc
    15301 attgttagtc gagggcttta aaacacttcg tcatgagatt aaagaactcc gggagaagta
    15361 aacgacagct gttgtagttt ctggtttcta ctgaatttaa attgtggggt gacactcacc
    15421 ccacgcattc agaaggggga gatgagatgg gggtaacatc gggatgggta ggctcttcgg
    15481 ctaagagcga aacaggtgag cagtggatgg gagccgccgg aaccaaactg ggactgagta
    15541 aaccttttat gatgagccaa atggttgggc gaactatggg ctgtaaaatt gcaactgagt
    15601 actataaatg gaaatcctct gacaaggttg ataactgggg cgcagttggc gctgactggc
    15661 ctttagaaga aaaaagtaaa ggtacaatta caaacgccgc aagctgcgga tcagggaggc
    15721 tggtaggggc tgtcgttaca ctttctcact ttttgacgaa ctctacaccg acagctgctg
    15781 tttatttagc cggtggtaaa gcaggtaaca tcaccgtaaa cgtaggtggt gctacacaaa
    15841 ccatgattta tcagggcgtt gttagtgggt tccagtatta ctggtcaggt tctgttagtt
    15901 ccgctttcgt ggaggcaatg aaaaagacgg gagtacccca ggatctaaaa attagttaaa
    15961 tggtaaataa ataattttaa aaacttcacg ttctacatac cggagacgcc ggatatatag
    16021 gatattgttt taagttgcca gagaaatttt tccggacgga tgctgataat aatgatgtgc
    16081 caatgacggc agcatcatgg atggcactga gtgaagcgac agagcaggcg atgtttgcga
    16141 agggagtgga gattaataca cggcagttgc agatgaaagc cgaggttgag gcgctgacag
    16201 acctgaaggc gatccgcagt tatgttgtcg gatggcctgc tggctgaata aaaaaacggg
    16261 accacgacca gtcccggaac catgagtttt agggtattag tttgttatca tagttagcgt
    16321 gctaagtatg ccatgtcagg ttgattagtg aagtgatgtt gttcgcattt ttgcacggcg
    16381 gagaatattc agatttttgg aaatccatat ttttcccgtg cgcgattaca tgcttcattt
    16441 acgatgctat tttcgccgga cattgcgaat tccctgcatg tggacggttt ttgtaaacag
    16501 agcaatatgc gttttctccg ggggggccgg caagagcgcc acatcgggga tttttctgat
    16561 tggtgccgcg catacagcga tgaaaaggag atatttgctc agtgagactg accgaaacct
    16621 ttccgccagc atcgtcagct tctgcccagt aaaaagagac gcggaaaatg cacaacaggc
    16681 accacacgtc atgcatggat tcagattgct cataattcac cagtacagct ataaatcgta
    16741 aagagaacag cggtacatcg tatgtaagaa cgtaccgcgg ctggctggtg aacttccgat
    16801 agtgcgagta ttgaatgatt tccagccgtt accgatttta cgtgctaatt agtgaacaaa
    16861 ccactcgtca gcagactccc aggtatcttt cagagtttcc tgaacaaaag ttttagctga
    16921 atctttatcg gcggtgcgcg taacagaaag gccatcgttg ctggtagctt ttacgatcac
    16981 ctctacatcg tcataacgtt tactgatgcg tcgggttaat tcttccttta acgcatccac
    17041 agcaccggtt ggcattttag tcattttttc tttggctatg cagatttcaa tacgcataaa
    17101 agtccctcta cactgtgttt gtatacagta tcatttttaa ctgtatggat aaacagtatt
    17161 aagggtgaag gaaagtgatt ttttggggca tgcatggggc aaaaatattt gttgtggggc
    17221 attttggggc atgattggga cactttgtta catatgaact ttgccgattt ttatatgaca
    17281 tggaaataca acgctttgat tcttctaaat aaaaaacatg ctcttgggcg ttctttagtg
    17341 atttttaaaa attccgtatc acgcagttaa agtggcgggc atactcttca aggctggtga
    17401 tccccaaccg cacccattta ggatgcgacc attgcggtag accgatgtaa atcataacgc
    17461 gtgaaggatc tcttccacgc tacgcacacg ggcgatgcgc gggtagatat gattaatgct
    17521 gttattgtgt tgctcggcgc tggcggcact acaggcgtct tcggcaatca ccagattaaa
    17581 gccaagttcc caggcattgc gggcggtgga ttcaacaccg atattggtcg agatcccaca
    17641 taacactatt gtatcgatac ctcggcggcg cagttgcaac tccagatccg taccgtaaaa
    17701 cgcaccccac tgacgtttga tgatttcgat atcactgtca gttgcaccta atgcagctgg
    17761 atgttgccac cagttttcgg gcaacacttt agcggggg
//
LOCUS       DADMJE010000078        17692 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.079, whole genome shotgun sequence.
ACCESSION   DADMJE010000078 DADMJE010000000
VERSION     DADMJE010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17692)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17692)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17692
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.079"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..224)
                     /locus_tag="JN001_002366"
     CDS             complement(<1..224)
                     /locus_tag="JN001_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY9053568.1"
                     /translation="MTWNLLALATALQTVPEQNIDVTNSENALIIKMNDYGDLQINIL
                     FTSRQMIIETFICPVSSISNPDEFNTFLLR"
     gene            complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JN001_002367"
     CDS             complement(351..1082)
                     /gene="rlmB"
                     /locus_tag="JN001_002367"
                     /EC_number="2.1.1.185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HAY9053569.1"
                     /translation="MSEMIYGIHAVQALLERAPERFQEVFILKGREDKRLLPLIHALE
                     AQGVVIQLANRQYLDEKSDGAVHQGIIARVKPGRQYQENDLPDLIASLDQPFLLILDG
                     VTDPHNLGACLRSADAAGVHAVIVPKDRSAQLNATAKKVACGAAESVPLIRVTNLVRT
                     MRMLQEENIWIVGTAGEADHTLYQSKMTGRLALVMGAEGEGMRRLTREHCDELISIPM
                     AGSVSSLNVSVATGICLFEAVRQRS"
     gene            complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JN001_002368"
     CDS             complement(1263..3704)
                     /gene="rnr"
                     /locus_tag="JN001_002368"
                     /EC_number="3.1.13.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HAY9053570.1"
                     /translation="MSQDPFQEREAEKYANPIPSREFILEHLTKREKPASRDELAVEL
                     HIEGEEQLEGLRRRLRAMERDGQLVFTRRQCYALPERLDLVKGTVIGHRDGYGFLRVE
                     GRKDDLYLSSEQMKTCIHGDQVLAQPLGADRKGRREARIVRVLVPKTSQIVGRYFTEA
                     GVGFVVPDDSRLSFDILIPPDQIMGARMGFVVVVELTQRPTRRTKAVGKIVEVLGDNM
                     GTGMAVDIALRTHEIPYIWPQAVEQQVAGLKEEVPEEAKAGRVDLRDLPLVTIDGEDA
                     RDFDDAVYCEKKRGGGWRLWVAIADVSYYVRPPTPLDREARNRGTSVYFPSQVIPMLP
                     EVLSNGLCSLNPQVDRLCMVCEMTVSSKGRLTGYKFYEAVMSSHARLTYTKVWHILQG
                     DQDLREQYAPLVKHLEELHNLYKVLDKAREERGGISFESEEAKFIFNAECRIERIEQT
                     QRNDAHKLIEECMILANISAARFVEKAKEPALFRIHDKPSTEAITSFRSVLAELGLEL
                     PGGNKPEPRDYAELLESVADRPDAEMLQTMLLRSMKQAIYDPENRGHFGLALQSYAHF
                     TSPIRRYPDLTLHRAIKYLLAKEQGHQGNTTETGGYHYSMEEMLQLGQHCSMAERRAD
                     EATRDVADWLKCDFMLDQVGNVFKGVISSVTGFGFFVRLDDLFIDGLVHVSSLDNDYY
                     RFDQVGQRLMGESSGQTYRLGDRVEVRVEAVNMDERKIDFSLISSERAPRNVGKTARE
                     KAKKGDAGKKGGKRRLVGKKVNFEPDSAFRGEKKTKPKAAKKDARKAKKPSAKTQKIA
                     AATKAKRAAKKKVAE"
     gene            complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JN001_002369"
     CDS             complement(3743..4168)
                     /gene="nsrR"
                     /locus_tag="JN001_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitric oxide-sensing transcriptional repressor
                     NsrR"
                     /protein_id="HAY9053571.1"
                     /translation="MQLTSFTDYGLRALIYMASLPEGRMTSISEVTDVYGVSRNHMVK
                     IINQLSRAGYVTAVRGKNGGIRLGKPASAIRIGDVVRELEPLSLVNCSSEFCHITPAC
                     RLKQALSKAVQSFLTELDNYTLADLVEENQPLYKLLLVE"
     gene            complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JN001_002370"
     CDS             complement(4373..5671)
                     /gene="purA"
                     /locus_tag="JN001_002370"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019842885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HAY9053572.1"
                     /translation="MGNNVVVLGTQWGDEGKGKIVDLLTERAKYVVRYQGGHNAGHTL
                     VINGEKTVLHLIPSGILRENVTSIIGNGVVLSPAALMKEMKELEDRGIPVRERLLLSE
                     ACPLILDYHVALDNAREKARGAKAIGTTGRGIGPAYEDKVARRGLRVGDLFDKETFAE
                     KLKEVMEYHNFQLVNYYKAEAVDYQKVLDDTMAVADILTSMVVDVSDLLDQARQRGDF
                     VMFEGAQGTLLDIDHGTYPYVTSSNTTAGGVATGSGLGPRYVDYVLGILKAYSTRVGA
                     GPFPTELFDETGEFLCKQGNEFGATTGRRRRTGWLDTVAVRRAVQLNSLSGFCLTKLD
                     VLDGLKEVKLCVAYRMPDGREVTTTPLAADDWKGVEPIYETMPGWSESTFGVKDRSGL
                     PQAALNYIKRIEELTGVPIDIISTGPDRTETMILRDPFDA"
     gene            complement(5775..5972)
                     /locus_tag="JN001_002371"
     CDS             complement(5775..5972)
                     /locus_tag="JN001_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HAY9053573.1"
                     /translation="MNSTIWLALALVLVLEGLGPMLYPKAWKKMISAMTNLPDNILRR
                     FGGGLVVAGVVVYYMLRKTIG"
     gene            complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JN001_002372"
     CDS             complement(6054..7058)
                     /gene="hflC"
                     /locus_tag="JN001_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HAY9053574.1"
                     /translation="MRKSVIAIIIIVLVVLYMSVFVVKEGERGITLRFGKVLRDDDNK
                     PLVYEPGLHFKIPFIETVKMLDARIQTMDNQADRFVTKEKKDLIVDSYIKWRISDFSR
                     YYLATGGGDISQAEVLLKRKFSDRLRSEIGRLDVKDIVTDSRGRLTLEVRDALNSGSA
                     GTEDEVTTPAADNAIAEAAERVTAETKGKVPVINPNSMAALGIEVVDVRIKQINLPTE
                     VSEAIYNRMRAEREAVARRHRSQGQEEAEKLRATADYEVTRTLAEAERQGRIMRGEGD
                     AEAAKLFADAFSKDPDFYAFIRSLRAYENSFSGNQDVMVMSPDSDFFRYMKTPTSATR
                     "
     gene            complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JN001_002373"
     CDS             complement(7061..8320)
                     /gene="hflK"
                     /locus_tag="JN001_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HAY9053575.1"
                     /translation="MAWNQPGNNGQDRDPWGSSKPGGNSEGNGNKGGRDQGPPDLDDI
                     FRKLSKKLGGLGGGKGTGSGGGSSSQGPRPQLGGRVVTIAAAAIVIIWAASGFYTIKE
                     AERGVVTRFGKFSHLVEPGLNWKPTFIDEVKPVNVEAVRELAASGVMLTSDENVVRVE
                     MNVQYRVTYPEKYLYSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQR
                     ELEETIRPYDMGITLLDVNFQAARPPEEVKAAFDDAIAARENEQQYIREAEAYTNEVQ
                     PRANGQAQRILEEARAYKAQTILEAQGEVARFAKLLPEYKAAPEITRERLYIETMEKV
                     LGNTRKVLVNDKGGNLMVLPLDQMLKGGNAPAAKSDNGASNLLRLPPASSSTTSGASN
                     TSSTSQGDIMDQRRANAQRNDYQRQGE"
     gene            complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JN001_002374"
     CDS             complement(8406..9686)
                     /gene="hflX"
                     /locus_tag="JN001_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HAY9053576.1"
                     /translation="MFDRYDAGEQAVLVHIYFTKDKDMEDLQEFESLVSSAGVEALQV
                     ITGSRKAPHPKYFVGEGKAVEIAEAVKATGASVVLFDHALSPAQERNLERLCECRVID
                     RTGLILDIFAQRARTHEGKLQVELAQLRHLATRLVRGWTHLERQKGGIGLRGPGETQL
                     ETDRRLLRNRIVQIQSRLERVEKQREQGRQSRIKADVPTVSLVGYTNAGKSTLFNRIT
                     EARVYAADQLFATLDPTLRRIDVADVGETVLADTVGFIRHLPHDLVAAFKATLQETRQ
                     ATLLLHVIDAADVRVQENIEAVNTVLEEIDAHEIPTLLVMNKIDMLEDFEPRIDRDEE
                     NKPIRVWLSAQTGAGIPQLFQALTERLSGEVAQHTLRLPPQEGRLRSRFYQLQAIEKE
                     WMEEDGSVSLQVRMPIVDWRRLCKQEPALIDYLI"
     gene            complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JN001_002375"
     CDS             complement(9763..10071)
                     /gene="hfq"
                     /locus_tag="JN001_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HAY9053577.1"
                     /translation="MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVI
                     LLKNTVSQMVYKHAISTVVPSRPVSHHSNNAGGGTSSNYHHGSSAQNTSAQQDSEETE
                     "
     gene            complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JN001_002376"
     CDS             complement(10157..11107)
                     /gene="miaA"
                     /locus_tag="JN001_002376"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HAY9053578.1"
                     /translation="MSDISKASLPKAIFLMGPTASGKTALAIELRKILPVELISVDSA
                     LIYKGMDIGTAKPNAEELLAAPHRLLDIRDPSQAYSAADFRRDALAEMADITAAGRIP
                     LLVGGTMLYFKALLEGLSPLPSADPEVRARIEQQAAEQGWESLHRQLQEVDPVAAARI
                     HPNDPQRLSRALEVFFISGKTLTELTQTSGDALPYQVHQFAIAPASRELLHQRIEQRF
                     HQMLASGFEAEVRALFARGDLHTDLPSIRCVGYRQMWSYLEGEISYDEMVYRGVCATR
                     QLAKRQITWLRGWEGVHWLDSEKPEQARDEVLQVVGAIAG"
     gene            complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JN001_002377"
     CDS             complement(11100..12947)
                     /gene="mutL"
                     /locus_tag="JN001_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HAY9053579.1"
                     /translation="MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDI
                     DIERGGAKLIRIRDNGCGIKKDELALALARHATSKIASLDDLEAIISLGFRGEALASI
                     SSVSRLTLTSRTAEQQEAWQAYAEGRDMNVTVKPAAHPVGTTLEVLDLFYNTPARRKF
                     LRTEKTEFNHIDEIIRRIALARFDVTINLSHNGKIVRQYRAVPEGGQKERRLGAICGT
                     AFLEQALAIEWQHGDLTLRGWVADPNHTTPALAEIQYCYVNGRMMRDRLINHAIRQAC
                     EDKLGADQQPAFVLYLEIDPHQVDVNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQL
                     ETPLPLDDEPQPAPRSIPENRVAAGRNHFAEPAAREPVAPRYTPAPASGSRPAAPWPN
                     AQPGYQKQQGEVYRQLLQTPAPMQKLKAPEPQEPALAANSQSFGRVLTIVHSDCALLE
                     RDGNISLLALPVAERWLRQVQLTPGEAPVCAQPLLIPLRLKVSGEEKSALEKAQSALA
                     ELGIDFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLAKQSVFEPGNIAQWIARNLM
                     SEHAQWSMAQAITLLADVERLCPQLVKTPPGGLLQSVDLHPAIKALKDE"
     gene            complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JN001_002378"
     CDS             complement(12957..14294)
                     /gene="amiB"
                     /locus_tag="JN001_002378"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase AmiB"
                     /protein_id="HAY9053580.1"
                     /translation="MMYRIRNWLVATLLLLCTPVGAATLSDIQVSNGNQQARITLSFI
                     GDPDYAFSHQSKRTVALDIKQTGVIQGLPLLFSGNNLVKAIRSGTPKDAQTLRLVVDL
                     TENGKTEAVKRQNGSNYTVVFTINADVPPPPPPPPVVAKRVETPAVVAPRVSEPARNP
                     FKTESNRTTGVISSNTVTRPAARATANTGDKIIIAIDAGHGGQDPGAIGPGGTREKNV
                     TIAIARKLRTLLNDDPMFKGVLTRDGDYFISVMGRSDVARKQNANFLVSIHADAAPNR
                     SATGASVWVLSNRRANSEMASWLEQHEKHSELLGGAGDVLANSQSDPYLSQAVLDLQF
                     GHSQRVGYDVATSMISQLQRIGEIHKRRPEHASLGVLRSPDIPSVLVETGFISNNSEE
                     RLLASDDYQQQLAEAIYKGLRNYFLAHPMQSAPQGATAQTASTVTTPDRTLPN"
     gene            complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JN001_002379"
     CDS             complement(14313..14774)
                     /gene="tsaE"
                     /locus_tag="JN001_002379"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HAY9053581.1"
                     /translation="MMNRVIPLPDEQATLDLGERVAKACDGATVIYLYGDLGAGKTTF
                     SRGFLQALGHQGNVKSPTYTLVEPYTLDNLMVYHFDLYRLADPEELEFMGIRDYFAND
                     AICLVEWPQQGTGVLPDPDVEIHIDYQAQGREARVSAVSSAGELLLARLAG"
     gene            complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JN001_002380"
     CDS             complement(14746..16293)
                     /gene="nnr"
                     /locus_tag="JN001_002380"
                     /EC_number="4.2.1.136"
                     /EC_number="5.1.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional ADP-dependent NAD(P)H-hydrate
                     dehydratase/NAD(P)H-hydrate epimerase"
                     /protein_id="HAY9053582.1"
                     /translation="MTDHTMKKNPVSIPHTVWYADDIRRGEREAADVLGLTLYELMLR
                     AGEAAFQVCRSAYPDARHWLVLCGHGNNGGDGYVVARLAKAVGIEVTLFAQESDKPLP
                     EEAALAREAWLNAGGEIHASNIVWPESVDLIVDALLGTGLRQAPRESISQLIDHANSH
                     PAPIVAVDIPSGLLAETGATPGAVINADHTITFIALKPGLLTGKARDVTGQLHFDSLG
                     LDSWLAGQETKIQRFSAEQLSHWLKPRRPTSHKGDHGRLVIIGGDHGTAGAIRMTGEA
                     ALRAGAGLVRVLTRSENIAPLLTARPELMVHELTMDSLTESLEWADVVVIGPGLGQQE
                     WGKKALQKVENFRKPMLWDADALNLLAINPDKRHNRVITPHPGEAARLLGCSVAEIES
                     DRLHCAKRLVQRYGGVAVLKGAGTVVAAHPDALGIIDAGNAGMASGGMGDVLSGIIGA
                     LLGQKLSPYDAACAGCVAHGAAADVLAARFGTRGMLATDLFSTLQRIVNPEVTDKNHD
                     ESSNSAP"
     gene            16292..17431
                     /gene="queG"
                     /locus_tag="JN001_002381"
     CDS             16292..17431
                     /gene="queG"
                     /locus_tag="JN001_002381"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HAY9053583.1"
                     /translation="MSEPLDLNQLAQKIKQWGLELGFQQVGITDTDLSESEPKLQAWL
                     DKQYHGEMDWMARHGMLRARPHELLPGTLRVISVRMNYLPANAAFASTLKNPKLGYVS
                     RYALGRDYHKLLRNRLKKLGEMIQQHCVSLNFRPFVDSAPILERPLAEKAGLGWTGKH
                     SLILNREAGSFFFLGELLVDIPLPVDQPVEEGCGKCVACMTICPTGAIVEPYTVDARR
                     CISYLTIELEGAIPEELRPLMGNRIYGCDDCQPICPWNRYSQLTTEEDFSPRKPLHAP
                     ELIELFAWSEEKFLKVTEGSAIRRIGHLRWLRNIAVALGNAPWDETILTALESRKGEH
                     PLLDEHIAWAIAQQIERRNACIVEVQLPKKQRLVRVIEKGLPRDA"
     gene            complement(17414..17467)
                     /locus_tag="JN001_002382"
     CDS             complement(17414..17467)
                     /locus_tag="JN001_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053584.1"
                     /translation="MRFYFYSQAVDESGVTR"
BASE COUNT         4068 a         5012 c         4393 g         4219 t
ORIGIN      
        1 tttcttaata agaaggtatt aaattcatct ggattgctga tactacttac cggacaaata
       61 aaggtttcga taatcatttg gcgggaagta aaaagaatat tgatttgcaa atcgccataa
      121 tcattcattt taataattaa tgcgttctcg ctatttgtta catcaatatt ttgttcaggt
      181 acagtttgca gcgccgtcgc cagcgccaac agattccatg tcatatatta ttccatatag
      241 atttagttta aatattaata aaatgaatat ttgcagtacg taattatctt accagctata
      301 gacaaaaaaa aaccatccaa atctggatgg cttttcataa ttcagaggaa ctagctgcgc
      361 tgacgcaccg cttcaaataa gcaaattccg gttgcaaccg aaacgttcag agaagaaaca
      421 cttcctgcca ttgggatgct gatcaactca tcgcaatgtt cacgggtcag gcgacgcata
      481 ccttcacctt ccgcgcccat caccagcgcc aggcgtccgg tcattttgct ctgatagagt
      541 gtatgatccg cctcacctgc cgtaccgacg atccagatat tctcttcctg caacatacgc
      601 atggtacgca ccaggttagt cacccgaatc agcggaacgc tttctgccgc gccacaggcc
      661 acttttttcg ccgtggcgtt gagctgggcg gagcgatctt tcggcacaat caccgcatga
      721 acaccagcgg catctgcgct acgcaggcac gcgccgaggt tatgcggatc ggttacaccg
      781 tcaaggatca gcaggaacgg ctgatcgagc gaagcgatca gatccggcaa atcattttcc
      841 tggtactgac gtcctggctt cacgcgggcg ataatgccct gatgcacggc accgtcgctt
      901 ttctcgtcga gatattggcg gtttgccagc tggataacca cgccctgggc ttcgagggcg
      961 tgaatcagcg gtaacagacg tttatcttca cggcctttta aaataaagac ttcctgaaaa
     1021 cgttcagggg cgcgctccag cagggcctgc actgcgtgga tgccgtaaat catttcgctc
     1081 attaatgtac tcgttgttta cgttttgcct gatgcactac gtttatccgg cctacatgat
     1141 ctctgcaata tattgaattt gcgtgattat gtaggccgga taaggcgttc acgccgcatc
     1201 cggcatgaac aaagcgcatt ttgtcagcaa tctaaccctc ttctgtttga agagggtaat
     1261 gatcactctg ccactttttt cttcgccgca cgcttcgctt tggtcgctgc agctattttc
     1321 tgcgttttcg ccgatggctt tttcgctttt ctcgcgtctt tcttcgctgc tttcggcttc
     1381 gtttttttct caccgcggaa ggcgctgtct ggctcaaagt ttaccttttt accgaccaga
     1441 cgacgcttgc cgcctttttt acctgcatcg ccttttttcg ctttctcgcg cgccgtttta
     1501 ccgacgttgc gcggtgcgcg ttcgctggag atcaggctaa agtcgatttt gcgctcgtcc
     1561 atattaaccg cttcgacgcg aacttccacg cgatcgccca gacgataagt ctggccgctg
     1621 gattcaccca tcagccgttg ccctacctgg tcaaagcgat agtagtcatt gtccagcgaa
     1681 gagacatgga ccagaccatc aatgaataag tcgtccagac ggacaaagaa tccaaagcca
     1741 gtgacgctgg aaattacgcc tttaaagacg ttacctacct ggtcgagcat gaagtcacac
     1801 ttcagccagt cagccacatc gcgcgttgct tcgtcggcac gacgttccgc catcgaacag
     1861 tgctgaccca gttgcagcat ttcttccatc gaataatggt agccgccggt ttcagtggtg
     1921 ttgccctgat gcccctgctc tttcgccagc agatatttaa tggcgcggtg cagcgtcagg
     1981 tctggataac gacgaatcgg cgaagtaaag tgcgcatagg actgcaatgc caggccaaag
     2041 tgaccacggt tttctggatc gtaaatcgcc tgtttcatcg agcgcagcag catggtttgc
     2101 agcatttctg catcaggacg atcggcaacc gactccagca gctccgcgta gtcacgcggt
     2161 tccggcttgt taccgcccgg cagttccagc cccagctccg ccagtactga acggaaagag
     2221 gtaatcgctt cggtgctcgg cttgtcgtga atacggaaca atgctggttc tttggctttc
     2281 tcaacgaaac gcgccgccga gatattcgcc agaatcatgc actcttcaat taacttgtgt
     2341 gcgtcgttac gctgagtctg ttcgatacgc tcaatacggc attcagcgtt gaaaataaac
     2401 ttcgcttctt cgctctcaaa tgagatcccg ccacgttctt cacgggcttt atccagcact
     2461 ttatagaggt tatgcaactc ttcgagatgc ttaaccagcg gagcgtactg ctcgcgcaga
     2521 tcctgatcgc cctgcagaat atgccagact ttggtgtagg tcagacgcgc gtgagagctc
     2581 atcaccgctt cgtagaattt gtagcccgtc aggcggcctt tcgacgaaac cgtcatctcg
     2641 cacaccatac acaggcggtc tacctgcgga ttgagcgagc acagaccgtt agagagcact
     2701 tccggcagca tagggataac ctgcgaaggg aagtacaccg acgtaccacg attacgcgct
     2761 tctctatcca gcggcgttgg cggacgcaca tagtagctga cgtcggcaat cgcgacccat
     2821 aaacgccagc cgccgccgcg ttttttctcg cagtaaaccg catcgtcaaa gtcacgggcg
     2881 tcttcgccat caatggtgac cagcggtaaa tcgcgcaaat cgacacggcc cgcttttgct
     2941 tcttccggca cttcttcttt cagcccggca acctgttgct caacagcctg cggccagatg
     3001 tacggaattt catgggtacg caaagcgata tcaaccgcca tgccggtgcc catattgtcg
     3061 cccagcactt cgacgatttt acccaccgct ttggtacggc gagtcgggcg ttgggtcagt
     3121 tcaacaacca ccacaaagcc catccgcgcg cccatgatct gatcgggcgg gattaagata
     3181 tcgaagctca gacggctatc gtcaggaacc acaaagccga cgcccgcttc ggtaaagtag
     3241 cgaccaacaa tctggctggt ttttggcacc agtacgcgga caatacgcgc ttcacgacga
     3301 cctttacggt cagcacccag cggctgagcc agcacctgat cgccatgaat gcaggttttc
     3361 atctgctcgc tggagagata caaatcatct ttacgccctt caacccgcag aaagccgtag
     3421 ccatcacggt ggccaataac ggtacctttc accaggtcga ggcgttccgg cagcgcatag
     3481 cactgacgac gagtgaagac cagttgacca tcgcgctcca tcgcgcgcag gcggcgacgc
     3541 aggccttcaa gctgctcttc gccttcaatg tgcagttcta ccgccagctc atcacggctg
     3601 gccggttttt cacgtttggt taaatgttcg aggataaatt cccgactagg gatgggattc
     3661 gcgtattttt cagcttcgcg ttcctggaaa ggatcttgtg acatctcggt tcctccgttg
     3721 tcatctctga tgaagatttt cgtcactcca ccagcaataa tttataaagc ggttgattct
     3781 cttcaaccaa atcggcaagc gtgtagttat ccagttccgt aagaaaactt tgcacggcct
     3841 tagaaagcgc ctgtttcaac cgacaggcag gtgtaatgtg gcaaaactca ctgctgcaat
     3901 tcaccagcga taagggctcc agctcgcgca ccacatcacc aatacgtatc gcactcgccg
     3961 gtttacccag gcgaatgccg ccattttttc cacgaacagc agtcacgtag ccggcacgac
     4021 taagttgatt gattattttg accatatgat tacgggagac gccgtagacg tcagtcactt
     4081 cagaaatact ggtcatccgc ccttctggca atgacgccat gtagatcagc gcacgtaatc
     4141 cgtaatcagt gaaactcgtt aactgcacat caacctcaaa agggaaatcg ggaaaaaata
     4201 catttatatt gatgataaac cagccacaag ctgtgtcgct aatttatttc agttcgggga
     4261 aggaaaaaag cgaggattta acactgtgtc ggatagcgta atggcttaac cgacacagca
     4321 atgtatcaca ctgttagccc ggcaggcaaa atatctgcca ggcgtaccag aattacgcgt
     4381 cgaacgggtc gcgcagaatc atagtttcag tacgatccgg accggtagag atgatatcga
     4441 tcggcacacc ggtcagctct tcaatacgct tgatgtagtt cagcgccgcc tgcggcagcc
     4501 cgctacgatc tttcacgccg aaagtggatt cagaccagcc cggcatggtt tcgtaaatcg
     4561 gctctacacc tttccagtcg tcagctgcca gcggagtggt agtcacttcg cgaccatccg
     4621 gcatacggta agccacgcag agtttaacct ctttcaggcc atccagaacg tccagtttag
     4681 tcaggcagaa gccagacagg gagttcagct gtaccgcacg acgaacggca acggtgtcca
     4741 gccagccggt acgacgacga cgacccgtcg ttgcgccgaa ttcgttaccc tgcttgcaga
     4801 ggaactcgcc agtttcatca aacagttcgg tcgggaaagg acctgcaccc acacgagtgg
     4861 agtaagcttt gaggataccc agaacgtaat caacataacg cgggcccagg ccggaaccgg
     4921 tcgccacgcc accagcagtg gtgttggaag aagttacgta cggataagta ccgtggtcga
     4981 tatccagcag cgtaccctgc gcaccttcaa acatgacgaa atcgccacgc tgacgcgcct
     5041 ggtcgagcag gtcagaaacg tcaaccacca tagaagtcag gatgtcggca acagccatcg
     5101 tatcatccag aactttctgg taatcaaccg cttcagcttt gtagtagtta accaactgga
     5161 agttgtgata ttccatcact tctttcagtt tttcagcgaa ggtttctttg tcgaaaaggt
     5221 cgccaacacg cagaccgcga cgtgccactt tatcttcata agcaggcccg ataccacgac
     5281 cggtggtgcc gatcgctttc gcgccacgcg ctttctcacg cgcgttatcc agcgcaacgt
     5341 gataatcaag gatcagcgga catgcttcag acagcagcag acgctcacga acggggatgc
     5401 cacggtcttc cagttctttc atctctttca tcagcgcggc cggagacagc acaacaccgt
     5461 taccgatgat gctggttaca ttctcgcgga gaatacctga tggaataaga tggagaacgg
     5521 ttttttcacc gttgattacg agagtatggc ctgcgttgtg accgccctgg tagcgtacaa
     5581 catatttagc tcgttcagtc agaagatcga cgatcttacc tttaccttcg tcaccccatt
     5641 gggtgcccag tacgacgacg ttgttaccca tttttcaaaa tcaccgtttg cttaaaaatg
     5701 gattctacca tcgctttttc agagttacag cactttttgc actcaaaaat gacctcgatc
     5761 agtctgtttt ttgttcagcc aatcgttttc ctcaacatgt agtagaccac aacgcccgca
     5821 accacaagtc caccgccaaa acgacgtaaa atattatcgg gcaaattggt catcgcagag
     5881 atcatcttct tccatgcctt cgggtaaagc atcggcccta aaccttccag taccaaaacc
     5941 agggcaagcg ccagccagat tgtcgaattc attcattatc cttatagaaa aagaaaacca
     6001 ccgacatccc tgaggatgcg gtggctttat tgacctgtac cgcagtcgtt atattaacgc
     6061 gttgcggaag tcggcgtctt catgtagcgg aagaaatcgc tatccgggct catgaccatc
     6121 acgtcctgat tgccagagaa gctgttctca taagcacgca ggctacggat gaatgcgtag
     6181 aagtccggat ctttactgaa tgcatcagca aacagtttgg ctgcttcggc atcgccttca
     6241 ccacgcatga tgcggccctg acgctcagct tctgccagcg ttctggtcac ttcatagtcg
     6301 gcagtcgcgc gcagtttttc cgcttcttcc tgaccttgtg aacggtgacg acgcgctacc
     6361 gcttcacgct cggcgcgcat acggttgtag atcgcttcag acacttcggt cggcaggttg
     6421 atctgcttga tacgcacatc gacaacttca atacccagcg ccgccatact gttcgggttg
     6481 atgaccggaa ctttgccctt cgtctcagcc gttacgcgct ctgccgcttc ggcaatggcg
     6541 ttatctgctg ccggggtagt aacttcatct tctgtacccg cagaaccgga gttcagcgcg
     6601 tcacgtactt cgagggtcag acgaccacgg gaatcagtga cgatatcttt cacgtccagg
     6661 cgaccaattt cagaacgcag acggtcagag aacttacgtt tcaacagcac ttccgcttgc
     6721 gaaatgtcgc caccacccgt tgccaggtag taacggctga aatcgctgat gcgccatttg
     6781 atgtaagagt cgacgatcag gtctttcttc tctttggtca caaagcggtc ggcctggttg
     6841 tccatggtct gaatacgtgc gtcgagcatt ttcaccgttt caatgaacgg tatcttgaaa
     6901 tgcagacccg gctcataaac cagaggtttg ttgtcatcgt cacgcagtac cttaccaaaa
     6961 cgcagcgtaa taccgcgctc accttctttg acgacaaaga cagacatgta aagcactacc
     7021 agcacgatga tgataatcgc gataactgac ttacgcatcg ttattccccc tgacgctggt
     7081 agtcgttacg ctgcgcgttg gcgcggcgtt ggtccataat atcgccctga ctggtggacg
     7141 acgtgttgct tgctccactg gttgtggagg aagaggctgg cggcaaacgc agcagattgc
     7201 tggcaccgtt atcgctcttc gccgcagggg cgttaccacc tttcagcatc tggtctaacg
     7261 gcagaaccat caggttgcca cctttatcgt taaccagcac tttgcgggtg ttacccaaca
     7321 ctttttccat cgtctcgata tacagacgct cgcgagtaat ttccggcgcg gctttatatt
     7381 ccggcagaag tttagcaaag cgcgccactt caccctgagc ttccaggatg gtctgggcct
     7441 tgtacgcacg cgcctcttcg aggatacgtt gcgcctgacc gttcgcacgc ggctgaactt
     7501 cgttggtata cgcttctgct tcacgaatgt attgctgttc gttttcacgc gcggcaatcg
     7561 catcgtcaaa cgccgctttt acttcttccg gcggacgagc agcctggaag ttgacgtcca
     7621 gcagagtgat gcccatgtca tacggacgaa tcgtctcttc cagttcgcgc tgggtatcgc
     7681 tacgaatcac ggtacgacct tccgtcagaa tgcggtccat ggtgtattta ccgataaccc
     7741 cgcgcagggc gctgtcggta gcctgacgca ggctgtcatc cgggctggtc acgctataca
     7801 gatatttttc cggataggta acgcggtact gcacgttcat ctcaacgcgc actacgttct
     7861 cgtccgacgt cagcatcaca ccggaagcgg ccagttcacg cacggcttcc acgtttaccg
     7921 gtttgacttc gtcgataaac gtcggtttcc agttcagacc cggctcaacc agatggctga
     7981 atttaccaaa gcgtgttacc acgccgcgtt cggcttcttt aatggtatag aaaccactgg
     8041 ccgcccagat aatgacaatc gctgccgctg cgatggtaac gacacgaccg ccaagctgcg
     8101 ggcgcgggcc ttgcgatgaa ctgccaccgc cagatccggt gcctttaccg ccgcccagac
     8161 caccgagctt tttgctcagt ttgcggaaga tatcatctaa atcaggtggc ccttgatcgc
     8221 gaccgccttt gtttccattt ccctcagagt tgccgccagg tttgctgctt ccccacgggt
     8281 cgcggtcttg tccgttatta ccgggctgat tccacgccat gtttgtgctc catatttgtt
     8341 atgcggtgat ccctgttgtc tttcgacgcc agaggatatg actccacgct tcagacgcta
     8401 cgccgttaga tcaggtaatc gatcaacgcc ggttcttgtt tacagaggcg acgccagtca
     8461 acgatcggca tacgaacttg cagacttacg ctgccgtcct cctccatcca ctctttttct
     8521 attgcctgaa gctgataaaa acgacttctc agacgccctt cctgcggtgg cagacgcaat
     8581 gtatgctgcg ccacctcgcc ggaaagccgc tccgtcaaag cctgaaaaag ctgtggtatc
     8641 cccgctccgg tctgtgcgga aagccagaca cggatcggtt tgttctcttc gtcccgatca
     8701 atacgcggtt cgaaatcttc cagcatatcg atcttgttca tcaccagcag ggttgggatc
     8761 tcgtgagcgt cgatctcttc aagaaccgta ttcaccgctt cgatgttttc ttgtacacgc
     8821 acatccgccg catcaatgac gtgcagcagt aatgtggctt gccgcgtctc ttgtaacgtg
     8881 gctttaaatg ccgccaccag atcgtgcggc agatggcgaa taaaccctac ggtatctgca
     8941 agtacggttt caccgacatc cgcgacgtca atacgccgca acgtcgggtc gagggtggca
     9001 aacaactggt ctgccgcgta gacccgcgct tcggtgatgc gattgaaaag ggtagattta
     9061 ccggcgttgg tatatcccac cagcgaaaca gtaggaacgt cggctttgat acgcgattgc
     9121 cgcccctgct cacgctgctt ttcaactctt tccaggcgcg actgtatctg cacgatgcga
     9181 ttacgcaaca aacgacggtc ggtttcgagc tgggtttcac ccggaccacg caaacctatc
     9241 ccgcctttct gtctttcaag gtgggtccag ccacgcacca ggcgcgtagc cagatggcgc
     9301 agctgcgcca gctcaacctg caacttaccc tcatgggtac gcgcacgttg ggcgaaaata
     9361 tctaaaataa ggccggtgcg gtcgatgaca cgacactcgc acaaacgctc caggttacgc
     9421 tcttgcgccg ggctcagggc atggtcaaaa agaacgaccg aagcacccgt cgctttgaca
     9481 gcttccgcaa tttcaactgc tttaccttca cctacaaaat actttgggtg cggcgcttta
     9541 cggctaccgg taatcacctg caatgcttcg acaccggcgg aagaaaccag agattcaaac
     9601 tcctggaggt cttccatatc tttgtctttc gtaaaataga tgtgtaccag taccgcctgc
     9661 tcaccagcat cataacggtc aaacaagcgt ataaccctct aaatagatca gcggggaacg
     9721 caggatcgct ggctccccgt gtaaaaaaaa cagcccgaaa ccttattcgg tttcttcgct
     9781 gtcctgttgc gcggaagtat tctgcgcgct gctaccatga tggtagttac tgctggtacc
     9841 gccaccggcg ttgttactgt gatgagaaac cggacgagac gggacaacag tagaaatcgc
     9901 gtgcttgtaa accatctggc tgaccgtgtt tttcaacagg atcacgaact gatcaaaaga
     9961 ctcgatttgc ccttgcagct taataccatt caccaaataa atagaaactg gaacacgttc
    10021 ccgacgcagt gcgttcagga acggatcttg taaagattgc cccttagcca ttctctcttt
    10081 tccttatatg cttatttgta ctttgaacct ttcgattctg aaaaaattgc gcacgatacg
    10141 tctcaattgt acacattcag cctgcgatag caccaacaac ctgtaatact tcgtcacgcg
    10201 cctgttctgg tttttcactg tcaagccagt gaaccccttc ccaaccacgc agccaggtta
    10261 tctgccgctt cgccaactgt ctcgtggcgc aaacacctcg ataaaccatt tcatcgtatg
    10321 agatttcgcc ttcaaggtaa gaccacatct ggcgataacc cacgcaacga atggaaggca
    10381 agtccgtatg caaatctcct cgggcaaaaa gcgcccggac ttctgcttca aaacctgaag
    10441 ccaacatctg atgaaaacgc tgctcaatgc gttgatggag cagttcacgg ctcgccgggg
    10501 cgatggcgaa ctgatgcacc tgatacggta gagcgtctcc tgacgtttgc gtcagttccg
    10561 ttaaagtttt acccgaaatg aaaaaaactt ccagtgcccg ggaaagcctt tgtggatcat
    10621 ttggatgaat ccttgctgcc gcaaccggat ctacctcctg aagttgacga tgcaatgact
    10681 cccaaccttg ctctgccgcc tgttgctcaa ttctggcccg cacttccggg tctgccgacg
    10741 gtagcggcga caacccttcc agcaatgcct tgaaatacaa catcgtaccg cccactaaca
    10801 gtgggatccg ccccgccgcg gtgatatcgg ccatttccgc cagcgcatcg cggcgaaaat
    10861 cagcagccga gtaagcctgc gacggatcgc gaatatccag caatcggtgc ggcgcggcga
    10921 gtaactcttc agcgttcggc ttcgccgtcc cgatatccat ccctttgtaa ataagggcag
    10981 aatcaacgct tatcaactct actggtaaaa ttttacgcag ctcaatggct aacgccgttt
    11041 taccggaggc cgtcggcccc atcaaaaaaa tcgccttagg caggctcgcc ttactgatat
    11101 cactcatctt tcagggcttt tatcgccgga tgtaaatcaa cagattgtaa cagaccaccc
    11161 ggcggcgttt tcacaagttg cggacataac cgttccacgt ccgccagcag ggttatggcc
    11221 tgtgccattg accactgcgc atgttcgctc atcagatttc gtgcaatcca ctgcgcaata
    11281 ttgccaggtt cgaatacgga ctgcttcgcc aggtagccta tcagttcagg aatcaagatt
    11341 tgtaaatttt gttggcgtaa gggtaaaggc acggccctga tggtcacatg ctgtgcatct
    11401 gactggaaat caatacccaa ttccgccagg gcagactgcg ctttttctaa tgccgatttt
    11461 tcttcgccag aaacttttag ccgcaacgga ataagcagcg gctgagcgca aactggcgct
    11521 tcacccgggg tcagttgtac ctgacgcagc caacgttctg ccactggcaa ggctaaaagt
    11581 gaaatgttgc cgtcgcgctc cagcaacgca cagtcggaat ggacgatagt cagtacccga
    11641 ccaaaactct gactgttcgc cgcaagtgca ggttcctgcg gttccggcgc ttttaatttt
    11701 tgcatcggcg cgggcgtttg caaaagctgg cgatacactt caccttgctg tttctggtag
    11761 cctggctgcg cattcggcca aggggcagcc ggacgactgc ctgatgctgg cgcaggagtg
    11821 tagcgcggag ctaccggctc acgagctgcc ggttctgcaa agtgattgcg ccccgccgcc
    11881 acgcggtttt ccggaatgga acgcggtgca ggttggggtt catcgtccag cggtagcggc
    11941 gtttccagtt gctgttgtag cacgctcagc acgccctgat agataaaatc atgcaccaga
    12001 cgcgactgat ggaaacgcac ttcgtgtttg gcggggtgca cgttgacgtc cacctgatgc
    12061 ggatcgatct ccagatacag cacaaatgcc ggttgctgat cggcccccag tttgtcttcg
    12121 caggcctggc ggatcgcgtg attgatcagg cgatcgcgca tcatgcgacc gttcacgtag
    12181 caatactgaa tttctgccag tgcgggcgtg gtgtgatttg gatcggccac ccagccgcgt
    12241 agcgtgagat cgccgtgttg ccattcaatc gccagcgctt gttcaagaaa agcggtgccg
    12301 caaatcgcgc ctaagcgccg ttctttttgc ccgccttccg gcactgcgcg gtactgacgc
    12361 acaattttac cgttatgcga caggttgatc gtgacgtcga aacgcgccag cgcaatgcgg
    12421 cggatgatct catcaatgtg gttaaattcg gttttctcgg tgcgcaggaa tttgcgccgc
    12481 gccggggtgt tgtagaacag atccagcacc tccagcgtcg tccccacagg atgcgccgcc
    12541 ggttttaccg tcacgttcat atcgcgccct tcggcatagg cctgccaggc ttcctgctgt
    12601 tctgcggtgc gtgaagtgag cgtcaggcgg gaaaccgaac tgatactcgc cagcgcctca
    12661 ccgcgaaagc ccaggctgat aatggcttcg agatcgtcca gagaggcgat tttactggtg
    12721 gcatgacgag ccagcgccag cgccagctca tcttttttga taccgcagcc gttatcacga
    12781 atgcggataa gtttcgcccc accgcgttcg atatcaatat cgatacgcgt cgcacctgca
    12841 tcgaggctgt tttccaccag ttctttgact accgacgcag gtcgctcgac cacctcacct
    12901 gcggcaatct ggttcgccag ttgtggcggt aagacctgaa ttggcatcaa tcgtccttag
    12961 tttggcagcg tgcgatctgg cgtcgtcacc gtactggccg tttgtgccgt tgcaccctgc
    13021 ggcgcagatt gcatcggatg cgcaaggaaa taattgcgca ggcctttgta aatggcttct
    13081 gccagctgtt gttggtaatc gtcgctcgcc agcaaacgtt cttcgctgtt gttgctgata
    13141 aaaccggttt cgaccagtac tgacgggata tccggcgaac gcagaacgcc gagactcgcg
    13201 tgttctggtc ggcgtttatg tatttcgcca atgcgttgca actgactgat catactggtc
    13261 gctacatcat accctacccg ctgggaatga ccgaactgta aatccagcac cgcctggctt
    13321 aaatagggat cagactgact gttcgccagc acatcgcccg ccccacccag cagctccgaa
    13381 tgtttctcgt gctgctccag ccagctggcc atttcgctgt tggcgcgacg gttagagagc
    13441 acccatacgg aagcgccagt cgcactgcgg ttcggtgcgg catcagcgtg aatcgacacg
    13501 aggaaattag cgttttgctt acgtgccaca tcgctgcgcc ccatcaccga aataaagtaa
    13561 tccccgtcac gggttaaaac gcctttaaac atcggatcgt cattgagcaa agtacgcaat
    13621 ttacgcgcga tggcgatggt gacatttttc tcccgcgtac caccggggcc gatagcgcca
    13681 gggtcctgac cgccgtgtcc ggcatcaata gcgatgataa ttttatcgcc agtgttagcc
    13741 gtcgcgcgcg ctgccggacg cgttaccgta ttactgctga taacacccgt agtgcggtta
    13801 ctttccgttt taaacggatt gcgcgccggt tcgctgacgc gcggtgcgac aaccgcaggc
    13861 gtttcaacgc gtttcgcaac cacgggcggc ggaggaggcg gtggcggcac atcggcgtta
    13921 atcgtaaaga cgacagtgta attgctgcca ttctgccgct tcaccgcttc ggttttacca
    13981 ttttcggtaa gatcgaccac cagccgtagc gtttgtgcat ctttaggcgt tccagagcga
    14041 atcgccttca ccagattatt gccgctgaac aacaacggca gtccctgaat cacgcccgtt
    14101 tgtttgatat cgagcgccac ggtgcgtttg ctttgatggc taaacgcata atcaggatcg
    14161 ccaataaaac tcaacgttat ccgcgcctgt tgattaccgt tagaaacctg aatatcagag
    14221 agcgtcgcgg cacccaccgg cgtgcacagc agcagcagcg tcgctaccaa ccaatttctg
    14281 atgcgataca tcatcccgcc acctttcaaa ggttaaccgg ctaaacgcgc cagcaacaat
    14341 tcacccgcag aggaaaccgc actcacgcgc gcctcacggc cttgtgcctg ataatcaatg
    14401 tgtatttcga catccgggtc aggaagaaca cctgtacctt gttgtggcca ctccaccagg
    14461 cagatggcat cgttggcaaa ataatcgcgg atccccataa actccagctc ctcgggatcg
    14521 gcaaggcggt acaaatcaaa gtgataaacc attaaattgt cgagcgtata gggttcgacc
    14581 agcgtataag tggggctttt gacattaccc tgatgaccca gagcttgtaa aaagccccgg
    14641 ctaaaggtgg tcttacctgc gcctaaatcg ccatacagat agattacggt tgcgccatcg
    14701 caggctttcg ctacccgctc gcccaggtct aatgttgcct gctcatcagg gagcggaatt
    14761 actcgattca tcatggtttt tatcagtcac ttccgggtta acaatacgct gtagcgtgga
    14821 aaagagatcg gttgccagca tcccgcgcgt tccaaaacgc gccgccagta cgtcagctgc
    14881 cgcaccgtgc gcgacacagc ccgcacaggc ggcatcatac ggcgacagtt tttgcccaag
    14941 caatgcgcca ataataccag agagcacatc gcccatgccg ccgctcgcca tgcctgcatt
    15001 tccggcatca ataatgccta aagcgtcagg atgggcggcg accacggttc cggcaccttt
    15061 cagcaccgct acgccgccat aacgttgtac cagacgtttg gcgcaatgta agcggtcact
    15121 ttcaatttca gcgacggaac agcctaacaa ccgtgcggcc tcgccaggat gcggcgtgat
    15181 cacgcgattg tgacgcttat cgggattgat tgccagcagg ttcaatgcat cggcatccca
    15241 caacatcggt ttgcgaaaat tctcaacttt ttgcagtgct tttttccccc actcttgctg
    15301 gcccagaccg ggaccaatca ccaccacatc ggcccattcc aggctttcgg taagagagtc
    15361 catcgtcagt tcatgcacca tcaattccgg tcgtgcagtc agcagcggcg caatgttttc
    15421 actgcgggtc agtactcgga ctaaaccagc accagcacgc agcgccgctt cccccgtcat
    15481 acgaatagcc cccgccgtgc cgtgatcgcc accgataatt accagccgcc cgtgatcgcc
    15541 tttatgcgaa gtcgggcgac gcggttttag ccagtgagaa agttgttctg ctgaaaaccg
    15601 ctgaattttc gtctcctgac ctgccagcca actatccagc cccagtgagt caaaatgcag
    15661 ttgtccggta acatcccgcg cttttccagt gagcaagcct ggtttcagcg caataaaagt
    15721 gatggtgtga tcggcgttga tcaccgcgcc tggcgtagcg ccagtttcag ccagcaggcc
    15781 ggaagggata tcaaccgcca caatcggcgc aggatgggaa ttagcgtggt cgattaactg
    15841 gctaatggat tcgcggggcg cttgccgcaa accggtaccg agcagcgcat caacaatcag
    15901 atctaccgat tcgggccaga caatattcga agcatggatc tcgccacccg cgtttaacca
    15961 tgcttcgcgt gccagcgcgg cctcttccgg caacggtttg tcgctctcct gggcaaacaa
    16021 cgtgacctca atgccgaccg ctttggccag tcgcgcgacc acgtagccat cgccgccgtt
    16081 attaccatga ccgcacagca ccagccagtg gcgggcgtca ggatacgccg aacgacacac
    16141 ctggaatgcg gcctcgccag cgcgaagcat cagctcatag agtgtgagcc ccagcacatc
    16201 tgccgcctcg cgttctccgc ggcggatatc gtcggcgtac cagacggtgt gtggtatact
    16261 tacggggttt ttcttcattg tatggtccgt catgtcagag cccctcgatc tcaatcagtt
    16321 agcgcaaaaa attaaacagt gggggctgga actgggcttt cagcaggtag gtattaccga
    16381 taccgatctc agcgagtccg agcccaaact gcaagcatgg ctggacaaac aataccacgg
    16441 cgaaatggac tggatggcac gtcacggtat gctgcgcgct cgccctcatg agttattgcc
    16501 cggtacgctg cgcgtgatca gcgtgcggat gaattacctt cctgctaacg ccgcatttgc
    16561 cagcacgctg aaaaacccca aactcggcta tgttagccgt tatgcgctgg gccgtgacta
    16621 tcacaaactt ctgcgcaacc gactcaaaaa gctgggcgag atgattcagc aacattgtgt
    16681 ttcgctgaat tttagaccgt ttgtcgattc tgcgcctatt ctcgagcgcc cgttagctga
    16741 aaaagctggg ctcggctgga caggtaagca ctcacttatc ctcaatcgcg aggccggttc
    16801 gttcttcttt ttaggcgaat tgctggtcga tattccgctg cccgtggatc aaccagtcga
    16861 ggaaggatgc ggtaaatgcg tggcctgtat gacgatttgc ccgaccggtg ccatcgtcga
    16921 gccatatacc gtcgatgctc gccgctgtat ctcttatctc accatcgaac ttgaaggggc
    16981 gatcccggaa gagttgcgac cgttaatggg aaaccgtatt tacggttgcg atgactgcca
    17041 gcctatctgc ccgtggaatc gctattcaca actcaccaca gaagaggatt tcagcccgcg
    17101 taagccgcta cacgcaccgg aactcattga gttattcgcc tggagcgaag agaagttttt
    17161 aaaagtcacg gaaggatcgg cgattcgtcg aattggtcac ctgcgttggc tgcgtaatat
    17221 cgccgtagca ttaggcaatg ccccttggga tgaaacgatt ttgacagcgc tggaaagtcg
    17281 taaaggtgag cacccacttc tcgatgagca catagcgtgg gcgattgcgc agcaaataga
    17341 gagacgaaat gcgtgcatag tcgaagtgca attgccgaaa aaacagcgtc tggttcgggt
    17401 gattgaaaaa gggttaccgc gtgacgcctg attcatccac agcttgtgaa taaaaataaa
    17461 aacgcattgc aattcaagac gaataaaatc gtcaagtgat cgactcgaca aaacggaatc
    17521 ttaattttta acttatctat caataggtta aaaaaatact attcaccgtg cgaagtttct
    17581 ttgaaattaa gattacagcc tgaggctgtg gataactctg tttacaagag tttgtcagag
    17641 acaacgaaaa ccagcaataa cgcatcgctg tggatatttt attgagagaa ga
//
LOCUS       DADMJE010000079        17503 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.080, whole genome shotgun sequence.
ACCESSION   DADMJE010000079 DADMJE010000000
VERSION     DADMJE010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17503)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17503)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17503
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.080"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..744
                     /locus_tag="JN001_002383"
     CDS             <1..744
                     /locus_tag="JN001_002383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2686 family protein"
                     /protein_id="HAY9053585.1"
                     /translation="SSTDKPAKLKFHQYARATLLSNRGRDHNCDGRRTVEIHKLDLSD
                     WQAFNKLATKCNAYDGVTMNGDNSFGWNHEATLDNIHAQKYNKAYAGARLTAELKYLL
                     QDVESFEPNSKYTIHEVVLGPGYGTPDYTGQTIGYVVTLPAQMPNCWSSELPTIDLYI
                     DQLHTVTGVSNALGFIIAALLNAYSDLPHDLKIGLRSLSNSAAIYSGLGFERVPQDRD
                     IRSDRMHLTPANHPDLWTQENGEWIYLRN"
     gene            complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JN001_002384"
     CDS             complement(815..1264)
                     /gene="rplI"
                     /locus_tag="JN001_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005134442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HAY9053586.1"
                     /translation="MQVILLDKVANLGSLGDQVNVKAGYARNFLVPQGKAVPATKKNI
                     EFFEARRAELEAKLAEVLAAANARAEKINALETVTIASKAGDEGKLFGSIGTRDIADA
                     VTAAGVEVAKSEVRLPNGVLRTTGEHEVSFQVHSEVFAKVIVNVVAE"
     gene            complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JN001_002385"
     CDS             complement(1306..1533)
                     /gene="rpsR"
                     /locus_tag="JN001_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012986941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HAY9053587.1"
                     /translation="MARYFRRRKFCRFTAEGVQEIDYKDIATLKNYITESGKIVPSRI
                     TGTRAKYQRQLARAIKRARYLSLLPYTDRHQ"
     gene            complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JN001_002386"
     CDS             complement(1538..1852)
                     /gene="priB"
                     /locus_tag="JN001_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal replication protein N"
                     /protein_id="HAY9053588.1"
                     /translation="MTNRLVLSGTVCRTPLRKVSPSGIPHCQFVLEHRSVQEEAGFHR
                     QAWCQMPVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELIDS
                     GD"
     gene            complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JN001_002387"
     CDS             complement(1859..2254)
                     /gene="rpsF"
                     /locus_tag="JN001_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020456251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HAY9053589.1"
                     /translation="MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGR
                     RQLAYPINKLHKAHYVLMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPM
                     VKAKDERRERRDDFANETADDAEAGDSEE"
     gene            2581..2856
                     /locus_tag="JN001_002388"
     CDS             2581..2856
                     /locus_tag="JN001_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
                     /protein_id="HAY9053590.1"
                     /translation="MFSRVLALLAVLLLSANTWAAIEINNHQARNMDDVQSLGVIYIN
                     HNFATESEARQALNEETDAQGATYYHVILMREPGSNGNMHASADIYR"
     gene            complement(2931..3482)
                     /locus_tag="JN001_002389"
     CDS             complement(2931..3482)
                     /locus_tag="JN001_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000996729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1440 domain-containing protein"
                     /protein_id="HAY9053591.1"
                     /translation="MAINGLFVRTDPQRRRYGVALLVGVLSGIISAFVKWGAEVPLPP
                     RTFSGGRDEFNPPYIFLRDYLGIDPTQTVYTFSEHIINPVMVTHIIFSLVFAIGYCIV
                     AEIFPKVKLWQGILAGLIVTVAVHGIFCPALNLTPPLTQLPFDEYASEILGHIFWFWI
                     IEIMRRDLRNRITHEPDPEVAIR"
     gene            complement(3579..4265)
                     /locus_tag="JN001_002390"
     CDS             complement(3579..4265)
                     /locus_tag="JN001_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 4-epimerase"
                     /protein_id="HAY9053592.1"
                     /translation="MQKLKQQVFEANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSG
                     VAYETMKADDMVVVDMSGKVVEGKYRPSSDTATHLELYRRYPSLGGIVHTHSTHATAW
                     AQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGDAEPLHTP
                     GIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARSINPQLNHIDSFLMNKHFMRK
                     HGPNAYYGQK"
     gene            complement(4265..5119)
                     /locus_tag="JN001_002391"
     CDS             complement(4265..5119)
                     /locus_tag="JN001_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ribulose-5-phosphate 3-epimerase UlaE"
                     /protein_id="HAY9053593.1"
                     /translation="MLSKQIPLGIYEKALPAGECWLERLRLAKTLGFDFVEMSVDETD
                     ERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKA
                     IQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYP
                     LMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPG
                     VFKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETAEDPAAEVVKARDWVKARMA
                     KAGMVEAA"
     gene            complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JN001_002392"
     CDS             complement(5129..5779)
                     /gene="ulaD"
                     /locus_tag="JN001_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-L-gulonate-6-phosphate decarboxylase
                     UlaD"
                     /protein_id="HAY9053594.1"
                     /translation="MSLPMLQVALDNQTMDSAYETTRLIAEEVDIIEVGTILCVGEGV
                     RAVRDLKALYPHKIVLADAKIADAGKILSRMCFEANADWVTVICCADINTAKGALDVA
                     KEFNGDVQIELTGYWTWEQAQQWRDAGIQQVVYHRSRDAQAAGVAWGEADITAIKRLS
                     DMGFKVTVTGGLALEDLPLFKGIPIHVFIAGRSIRDAASPVEAARQFKRSIAELWG"
     gene            complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JN001_002393"
     CDS             complement(5793..6257)
                     /gene="ulaC"
                     /locus_tag="JN001_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIA"
                     /protein_id="HAY9053595.1"
                     /translation="MKLRDSLAENKSIRLQAEAETWQDAVKIGVDLLVAADVVEPRYY
                     QAILDAVEQHGPYFVLAPGLAMPHGRPEEGVKKTGFALVTLKKPLEFNHEDNDPVDIL
                     ITMAAVDANTHQEVGIMQIVNLFEDEENFDRLRACRTEQEVLDLIDRTNAAA"
     gene            complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JN001_002394"
     CDS             complement(6267..6572)
                     /gene="ulaB"
                     /locus_tag="JN001_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIB"
                     /protein_id="HAY9053596.1"
                     /translation="MTVRILAVCGNGQGSSMIMKMKVDQFLTQSNIDHTVNSCAVGEY
                     KSELSGADIIIASTHIAGEITVTGNKYVVGVRNMLSPADFGPKLLEVIKAHFPQDVK"
     gene            complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JN001_002395"
     CDS             complement(6588..8036)
                     /gene="ulaA"
                     /locus_tag="JN001_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HAY9053597.1"
                     /translation="MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVT
                     CLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISD
                     TYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
                     IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASW
                     IAYKVAPFLGKKEESVEDLKLPGWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAM
                     AGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAA
                     IYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFG
                     GWRAALKICLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMA
                     VIIVIALAYMFFAGRALRAEEDAEKQLAEQSA"
     gene            8340..9404
                     /gene="ulaG"
                     /locus_tag="JN001_002396"
     CDS             8340..9404
                     /gene="ulaG"
                     /locus_tag="JN001_002396"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003856017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-ascorbate 6-phosphate lactonase"
                     /protein_id="HAY9053598.1"
                     /translation="MSKVKSITRESWILSTFPEWGSWLNEEIEQEQVAPGTFAMWWLG
                     CTGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTPPFVL
                     DPFAIRQIDAVLATHDHNDHIDVNVAAAVMQNCADDVPFIGPKTCVDLWIGWGVPKER
                     CIVVKPGDVVKVKDIEIHALDAFDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPG
                     GSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENPRGITDKMTSADMLRMGEALNAKV
                     VIPFHHDIWSNFQAAPQEIRVQWEMKKDRLKYGFKPFIWQVGGKFTWPLDKDNFEYHY
                     PRGFDDCFTIEPDLPFKSFL"
     gene            9512..10267
                     /gene="ulaR"
                     /locus_tag="JN001_002397"
     CDS             9512..10267
                     /gene="ulaR"
                     /locus_tag="JN001_002397"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator UlaR"
                     /protein_id="HAY9053599.1"
                     /translation="MTEAQRHQILLEMLAQLGFVTVEKVVERLGISPATARRDINKLD
                     ESGKLKKVRNGAEAITQQRPRWTPMNLHQAQNHDEKVRIAKAASQLVNPGESVVINCG
                     STAFLLGREMCGKPVQIITNYLPLANYLIDQEHDSVIIMGGQYNKSQSITLSPQGSEN
                     SLYAGHWMFTSGKGLTAEGLYKTDMLTAMAEQKMLSVVGKLVVLVDSSKIGERAGMLF
                     SRADQIDMLITGKNANPEILQQLEAQGVSILRV"
     gene            complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JN001_002398"
     CDS             complement(10264..11013)
                     /gene="yjfP"
                     /locus_tag="JN001_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HAY9053600.1"
                     /translation="MIEIESRELADIPVLHAYPVGQKDTPLPCVIFYHGFTSSSLVYS
                     YFAVALAQAGLRVIMPDAPDHGSRFSSDEARRLNQFWQILLQSMQEFTTLRAAIAEEN
                     WLLDDRLAVGGASMGAMTALGITARHPTVKCTASMMGSGYFTSLARSLFPPLIPETAA
                     QQNEFNNIIAPLAEWEATNHLEQLGDRPLLLWHGLDDDVVPADESLRLQQALSETGRD
                     KLLTCSWQPGVRHRITPEALDAAVTFFRQHL"
     gene            11195..11524
                     /gene="bsmA"
                     /locus_tag="JN001_002399"
     CDS             11195..11524
                     /gene="bsmA"
                     /locus_tag="JN001_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313192.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm peroxide resistance protein BsmA"
                     /protein_id="HAY9053601.1"
                     /translation="MVSRKRNSVIYRFACLLLVLMLSACSALQGTPQPAPPVTNHPQE
                     IRRDQTQGLQRIGSVSTMVRGSPDDALAEIRAKAVAAKADYYVVVMVDETIVTGQWYS
                     QAILYRK"
     gene            11673..11948
                     /gene="yjfN"
                     /locus_tag="JN001_002400"
     CDS             11673..11948
                     /gene="yjfN"
                     /locus_tag="JN001_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418609.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease activator YjfN"
                     /protein_id="HAY9053602.1"
                     /translation="MKQLLASPSLQLVTYPASATAQSAEFASADCVTGLNEIGQISVS
                     NISGDPQDVERIVALKADEQGASWYRIITMYEDQQPDNWRVQAILYA"
     gene            complement(12065..13690)
                     /locus_tag="JN001_002401"
     CDS             complement(12065..13690)
                     /locus_tag="JN001_002401"
                     /EC_number="1.3.8.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418608.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isovaleryl-CoA dehydrogenase"
                     /protein_id="HAY9053603.1"
                     /translation="MHWQTHTVFNQPIPLNNSNLYLSDGALCEAVTREGAGWDSDFLA
                     SIGQQLGTAESLELGRLANVNPPELLRYDAQGRRLDDVRFHPAWHLLMQALCTNRVHN
                     LAWEEDARSGAFVARAARFMLHAQVEAGSLCPITMTFAATPLLLQMLPTPFQDWTTPL
                     LSDRYDSLLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS
                     VPQSDAHLVLAQTTGGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDA
                     IGWLLGQEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQ
                     PLMCHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPF
                     VAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQAGVYDLLS
                     EAFVEVKGQDRYFDRAVRRLQQQLRKPAEELGREITHQLFLLGCGAQMLKYASPPMAQ
                     AWCQVMLDTRGGVRLSEQIQNDLLLRATGGVCV"
     gene            complement(13774..14832)
                     /locus_tag="JN001_002402"
     CDS             complement(13774..14832)
                     /locus_tag="JN001_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathionylspermidine synthase family protein"
                     /protein_id="HAY9053604.1"
                     /translation="MLRHNVPVRRDLDQIAANNGFDFHIIDNEIYWDESRAYRFTLRQ
                     IEEQIEKPTAELHQMCLEVVDRAVKDEEILTQLAIPPLYWDVIAESWRARDPSLYGRM
                     DFAWCGNAPVKLLEYNAIQERLISRFSELYSREPFYFCCCQDTDEDRSTVLYLQDCAQ
                     QAGQESRFIYIEDLGLGVGGVLTDLDDNVIQRAFKLYPLEWMMRDDNGPLLRKRREQW
                     VEPLWKSILSNKGLMPLLWRFFPGHPNLLASWFEGEKPQIAAGESYVRKPIYSREGGN
                     VTIFDGQNNVVDHADGDYADEPMIYQAFQPLPRFGDSYTLIGSWIVDDEACGMGIRED
                     NTLITKDTSRFVPHYIAG"
     gene            complement(14835..15473)
                     /locus_tag="JN001_002403"
     CDS             complement(14835..15473)
                     /locus_tag="JN001_002403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1190 domain-containing protein"
                     /protein_id="HAY9053605.1"
                     /translation="MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLAL
                     MGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADV
                     PKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
                     PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG"
     gene            complement(15483..15881)
                     /locus_tag="JN001_002404"
     CDS             complement(15483..15881)
                     /locus_tag="JN001_002404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF350 domain-containing protein"
                     /protein_id="HAY9053606.1"
                     /translation="MHILDSLLAFSAYFFIGVAMVIIFLFIYSKITPHNEWQLIKNNN
                     TAVSLAFSGTLLGYVIPLSSAAINAVSIPDYFAWGGIALVIQLLVFAGVRLYMPALSE
                     KIINHNTAAGMFMGTAALAGGIFNAACMTW"
     gene            complement(15899..16558)
                     /locus_tag="JN001_002405"
     CDS             complement(15899..16558)
                     /locus_tag="JN001_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjfK family protein"
                     /protein_id="HAY9053607.1"
                     /translation="MSGFFQRLFGKDNKPAIARGPLGLHLNSGFTLDTLAFRLLEDEL
                     LIALPGEEFTVAAVSRIDLGGGSQIFRYYTSGDEFLQINTTGGEDIDDIDDIKLFVYE
                     ESYGISKESHWREAINAKTMGAMTLNWQEKRWQRFFNSEEPGNIEPVYMLEKVENQNH
                     AKWEVHNFTMGYQRQVTEDTYEYLLLNGEESFNDLGEPEWLFSRALGVDIPLTSLHII
                     G"
     gene            complement(16609..17307)
                     /locus_tag="JN001_002406"
     CDS             complement(16609..17307)
                     /locus_tag="JN001_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HAY9053608.1"
                     /translation="MGILKSLFTLGKSFISQAEESIEETQGVRMLEQHIRDAKAELDK
                     AGKSRVDLLARVKLSHDKLKDLRERKASLEARALEALSKNVNPSLINEVAEEIARLEN
                     LITAEEQVLSNLEVSRDGVEKAVTATAQRIAQFEQQMEVVKATEAMQRAQQAVTTSTV
                     GASSSVSTAAESLKRLQTRQAERQARLDAAAQLEKVADGRDLDEKLAEAGIGGSNKSR
                     AQDVLARLQRQQGE"
     gene            complement(17380..>17503)
                     /locus_tag="JN001_002407"
     CDS             complement(17380..>17503)
                     /locus_tag="JN001_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2170 family protein"
                     /protein_id="HAY9053609.1"
                     /translation="QKMMPLSSVGISSVQQEEYYIVFGALSLKSSLEDILLEIT"
BASE COUNT         4464 a         4677 c         4188 g         4174 t
ORIGIN      
        1 tcgtccaccg acaaaccagc aaaattaaaa tttcatcaat acgcacgcgc tacattactg
       61 tcaaatcgtg gaagagatca taattgcgat ggcagacgta ctgttgagat ccacaaacta
      121 gatctctctg actggcaagc attcaataag ttagcaacga agtgtaatgc ttacgatgga
      181 gtaacaatga atggtgataa ttcttttgga tggaaccatg aagctacatt agataatatt
      241 cacgcccaga aatacaataa agcttacgcg ggtgcgaggt taaccgcaga actgaaatat
      301 ttattgcaag atgtcgaatc cttcgaaccc aacagtaaat acacaataca cgaagtggtt
      361 ttgggacctg gttatggtac tccagactat accggccaaa cgataggata cgttgtaacc
      421 cttcctgccc aaatgcctaa ttgctggtca tctgaactac caacaatcga tctttatatc
      481 gaccaacttc acactgttac aggcgtttct aatgccctcg gattcatcat tgctgcattg
      541 ctaaacgcgt attctgattt accccatgat ttgaaaattg gtctgcgttc cttatcaaat
      601 tcagcagcaa tctactcggg tttaggtttc gagcgagtgc cgcaggaccg agacataagg
      661 agtgatcgta tgcatctaac gccagcaaac catcctgact tatggacaca agagaatggt
      721 gaatggatct acttgcgaaa ctaatacctg acgaaaaata gaaagcaaaa cgccgaccaa
      781 tggtcggcgt ttttacgtct cgttgaataa cgaattattc agctactacg tttacgatca
      841 ctttcgcgaa tacttcgctg tgaacctgga agctcacttc gtgttcgcca gtggtacgca
      901 gaacgccgtt cggcagacga acttcgctct tagccacttc aacgccagct gcagttacag
      961 cgtcagcgat gtcgcgagta ccgatggaac cgaacagttt accttcgtcg ccagctttag
     1021 acgcgatggt aacagtttcc agtgcattga ttttctcagc gcgagcatta gcagctgcca
     1081 gaacttcagc cagtttagct tccagttcag cgcgacgtgc ttcgaagaat tcaatgtttt
     1141 tcttggtagc tggaacagct ttaccctgcg gtaccaggaa gttacgagca tagcccgctt
     1201 taacgtttac ctgatcacct aggctaccca ggtttgctac tttatcaagc agaataactt
     1261 gcattacctt atcctctcaa agtcgtatta atggaccgtg accgattact gatggcgatc
     1321 agtgtacggc agcagggaca ggtagcgagc gcgtttgata gcgcgagcca gctgacgctg
     1381 gtattttgca cgggtaccgg tgatacggct tgggacaatc ttaccgcttt cggtgatgta
     1441 gtttttcagc gtagcgatat ctttatagtc gatctcttga acgccttccg cggtgaaacg
     1501 gcagaacttg cgacgacgga aataacgtgc catatggcta gtctccagaa tctatcaatt
     1561 caatctgctc ggcatgcaaa accattttgc tcagtccgtt ctttgccttg tggcatgaaa
     1621 tgaacccctg aacggttatg cgactgccga ccgttatact gtgagtaatg gcttggtttt
     1681 cgtgtccgct aacaataacg ggcatttggc accacgcctg ccggtgaaaa ccggcttcct
     1741 cctgcacaga acgatgctca agcacgaact ggcagtgagg aattcctgat ggactgacct
     1801 ttcgaagggg agtcctgcac acggtgccgg acaacaccag acggttggtc atcagaaatt
     1861 actcttcaga atccccagct tcagcatcat cagcggtttc gtttgcgaaa tcatcgcgac
     1921 gctcacggcg ctcgtctttc gctttaacca tcggagatgc ttcggtaaca gcgtgcttgg
     1981 tacgcataac catgctgcgg ataacggcat cgttgaagcg gaaggtagtt tccagctcat
     2041 cgatcacttc ctgcggagct tcaacgttca tcagaacgta gtgtgctttg tgcagtttgt
     2101 tgatcgggta agccagctga cggcggcccc agtcttccag acggtggatc ttgccttctg
     2161 caccagtgat ggcagcagtg tagcgctcga tcatgcccgg aacctgttcg ctctggtcag
     2221 gatggaccat aaaaacgatt tcgtaatgac gcatcgaatt gctccttacg gattattcag
     2281 cctcctgtct gggtcagccg aatcccgggg aggcaaggaa cgtgttaaag gtcggctgaa
     2341 aaatgacgcg ttatagtact tgtatgcccc actaaactca aggccagccg acaaataaat
     2401 ctcatctttc gctcaaaaga actaactcgc tgatttgaag ttcatcacat tccgtcacag
     2461 tgttttttcg aacaactgca tcagaaatgg tcaccatcaa cttctttatc attgattaaa
     2521 attaaatcag aagatcatca cagaggagag cacacaaagt cagccgtcga ggaggtatct
     2581 atgttcagtc gtgttttagc ccttctggct gtgcttttgc taagtgcaaa tacatgggca
     2641 gccattgaaa ttaataacca ccaggccaga aatatggacg acgtacagag cttaggcgtg
     2701 atttatatca atcataattt cgccactgaa agcgaagcac gtcaggcatt aaatgaagag
     2761 acagatgcgc agggcgcaac gtactaccac gtaattctga tgcgggaacc ggggagtaac
     2821 ggcaatatgc acgccagcgc ggatatttat cgctagcacc aggtataacc aacgaaacat
     2881 tgccatagtt tgctttgccc ccttcgcagg gggctttttt atacggttat tcaccggatt
     2941 gcgacttccg gatctggctc atgagtaatg cgattacgta agtcgcggcg cataatttct
     3001 attatccaga accagaaaat atgccccagg atttcagagg catattcgtc aaaaggcaat
     3061 tgagtgagcg gcggcgttaa attcagcgcc gggcaaaata taccgtggac tgccactgtc
     3121 acaataagcc ctgctaatat cccctgccat aatttcactt tcgggaaaat ttccgcgaca
     3181 atacaatacc ctatcgcaaa aaccagtgag aagatgatat gcgtcaccat caccgggttg
     3241 ataatatgtt ccgagaatgt atacacagtt tgggttgggt cgatacctaa ataatcccgt
     3301 agaaagatat acggcgggtt aaattcatcg cgaccaccgg aaaatgtgcg cggtggcaag
     3361 gggacttccg ctccccattt aacaaatgct gaaataattc ctgaaagtac acccacaagt
     3421 aacgcaacgc catagcggcg acgttgcgga tccgttctga caaacaatcc attgatagcc
     3481 ataaaaacac ctgttgttta tacgattttt taactgaagc ggccccggaa tcagaccaat
     3541 tacatcccgc aggaggtaat aattccgggg cgcactgctt acttctgccc gtaataggcg
     3601 ttaggaccgt gcttacgcat gaagtgttta ttcatgagga agctgtcgat gtgattcagt
     3661 tgtgggttaa tactgcgcgc aatccacgcc attttcgcca cttcttccat caccaccgcg
     3721 ttatgcaccg cgtcgtgggc atctttcccc caggcgaacg gcccgtgctg atacaccaca
     3781 attcccggcg tatgcagcgg ctcggcgtca cccagcgttt cgataatcac tttgccggtg
     3841 ttcagttcat actcgccctg cacctcttct tcgcttaatc cacgcgtaca cgggatgtcg
     3901 ccaaagaagt agtcggcgtg cgtggtgcct aacgccggga tcgccagccc cgcctgcgcc
     3961 catgcggtgg catgagtgga atgggtatgg acaatgccgc cgagcgacgg gtaacgacgg
     4021 tagagttcaa gatgcgtcgc ggtgtcagaa gacgggcgat acttcccttc taccaccttg
     4081 ccgctcatat cgaccaccac catatcgtct gctttcatgg tttcgtaggc aacgccgctg
     4141 ggcttgatca ccaccagccc gcgttcgcgg tcgatagcgc tgacgttgcc ccaggtaaag
     4201 gtcaccagcc catagcgcgg cagatccatg ttggcttcaa acacctgctg ttttagcttt
     4261 tgcattatgc cgcctccacc atgcctgctt tggccatgcg cgctttcacc caatcacgcg
     4321 ctttcaccac ttctgccgcc gggtcttccg ccgtttcgct ccacatctca atcaggtacg
     4381 gcccgcaata gccactctgt ttgagcgttt cgaagcaacg ttcgaaatcc accacacctt
     4441 cgccaaatgg cacgtttttg aagacgcccg gtttggtgtc tttcacatgc accgcgacga
     4501 tatgcccgat tccggcctgc aactccatct gcacatcgtt gtcccacgcc gacaggttgc
     4561 cgatatctgg gtagagctgg aaccacgggt tgttgagata gtgcgcgtaa cccagcgcct
     4621 tgctgatgga gttcatcaac ggataatcca tgatctccat cgccagcgtc acctgcgcgc
     4681 ggctcgccat ctcaacgctc tctttcaggc cgtcacggaa acgacgacgc gtttcgttat
     4741 tggcttcctg atagtaaacg tcatagcccg ccagctggat cacgcgaatg ccaacgtcct
     4801 gggcgaactg gatggcttta cgcataatct ccagcccctg cgcccgcacc gcgtcatctt
     4861 cgctgcccaa cgggaaacga cgatgggcag aaaggcacat ggacggcaca cgcacgccgg
     4921 tttcaacaat cgcattcacc agcgccagac gctgctcgcg gctccagtcg aggcgcgaca
     4981 ggcgctcgtc agtttcatct accgacatct cgacaaaatc gaagcccaac gtttttgcca
     5041 gtcgcaggcg ttccagccag cactccccgg cggggagcgc tttttcatag atgccaagcg
     5101 ggatttgttt ggacaacata tccgctcctt agccccacag ttcggcgatg gaacgtttga
     5161 actgacgcgc ggcttcaacc ggagaagcgg catcacggat gctgcgaccg gcgataaaca
     5221 catgaattgg aatgcctttg aacagcggca gatcttccag cgccaggcca ccggtgacgg
     5281 tgactttgaa gcccatatcg gaaagacgtt tgatcgcagt gatatcggct tcaccccacg
     5341 ccacgccagc ggcctgcgcg tcacggctgc ggtgataaac cacctgctga atacctgcgt
     5401 cgcgccactg ttgcgcctgt tcccaggtcc agtaaccggt cagttcgatc tgcacgtcgc
     5461 cgttaaactc ttttgctacg tccagcgcac ctttggcggt gttgatatcc gcacaacaaa
     5521 tcacggtcac ccagtcagcg ttggcttcga agcacatacg agaaagaatt ttgcccgcat
     5581 cggcaatttt ggcgtctgcc agcacgattt tgtgcgggta gagcgctttc agatcgcgaa
     5641 ccgcacgcac gccttcgccc acgcacagaa tggtacccac ttcgataatg tcgacttctt
     5701 cggcaatcag gcgagtggtt tcgtaggcgc tatccatagt ctggttgtcc agcgcgactt
     5761 gcaacatcgg taatgacatc ttcaattcct tcttaagctg ccgcgttggt gcggtcaatg
     5821 agatccagta cttcctgctc ggtacggcag gcacgtaaac ggtcgaaatt ttcttcatct
     5881 tcaaacaggt tgacgatctg catgatgccc acttcctggt gcgtgttggc atcgaccgcc
     5941 gccatggtga tgaggatatc caccgggtcg ttatcttcgt ggttgaactc cagcggcttt
     6001 ttcagcgtca ccagcgcaaa accggttttc ttaacgccct cttccgggcg accgtgcggc
     6061 attgccaggc ctggtgcgag cacaaagtac ggaccgtgct gttcaaccgc atccagaatc
     6121 gcctggtagt aacgcggctc gacaacatcc gccgccacca gcaggtcaac gccgattttt
     6181 actgcgtcct gccatgtctc agcttcagcc tgcaggcgga tggatttatt ctccgccagc
     6241 gaatcacgta atttcatggc gcgtccttac ttcacatcct gcgggaaatg cgctttgatc
     6301 acttccagca gtttcgggcc aaagtcggca ggagagagca tgttgcgcac gccaaccacg
     6361 tatttgttgc cggtcacggt gatttcgccc gcaatgtgcg tagaagcgat gatgatatcc
     6421 gcgccgctca actcgctttt gtattcgcca accgcgcagc tatttaccgt gtggtcaatg
     6481 tttgattggg ttaaaaactg gtccactttc atcttcatga tcatggaact gccttgtccg
     6541 ttgccacaca cagccagaat acgtacggtc ataatcaaaa ctccttatta agcagactgt
     6601 tctgccagtt gtttttctgc atcttcttct gcgcgcagtg cgcggccagc gaagaacata
     6661 taagccagtg caattacaat gatgacggcc ataaaggcga taccgatgga gaagaagccc
     6721 tgcatcatcg gcggtgccag aatcgaccag tccgccatgc ccatccaggc gctcataccg
     6781 gtgagtttca ccgcccagac gcagccaaag atttcaatca tccccatcac cagacatatc
     6841 ttcagcgccg cacgccagcc gccgaagtgg ttagcgaaca cgccgatggt ggcgttggag
     6901 aagaacatcg ggataaagcc gggaataatc aggatcgagg aaccgcaggc gaccaggatg
     6961 ccaaccgcaa tcagctgacc gatggtgccc cacataaagc cccaaaccac ggcgttcggc
     7021 gcgaagctat agatagccgc acagtcaatc gccagaaccg caccagggat caggcgctgg
     7081 gagataccgt taaatgcttc agagagttcc gccacaaaca tgcgcacgcc ctgagtgatg
     7141 atgaagatcg ccaccgcgaa ggagaaacca gtttgcagga tgtacaccgt ccagttcact
     7201 ttgcctgcca tcgcctgcac ggtgtcgata ccgaaggaga gtagaatggc accaaagaag
     7261 atggtcatca caatcgccgt ggagacgatg ttgtcgtgga aaatattcag ccagcctggc
     7321 agtttgaggt cttcaacgct ttcctctttt ttgccgagga acggcgcaac tttataggca
     7381 atccatgatg caaactgttg ctggtgaccg atggagaaac cgcagccgtc cgtcacttcc
     7441 tgagtcggct tgtacatcat attggaggta atgccccagt agagcgaaac cagaatcgcc
     7501 gtgcagataa tggttgtcca catggagtag ccgaaaataa acaacgtaac ggcaatcagc
     7561 cccgcctgct ggaacatgat atgaccagtc agcatgatgg tacgaatacc ggtaatgcga
     7621 cgcagcagca cgtaacagat gttcagcgcc agcgctaaca acaccgcgta acctacccag
     7681 ctataggcat cgcccatgcg gtcgatggtt gccatcatcg acgcgtaagt atcggaaatt
     7741 gcgccgttaa tgccgtagac ttcggacatt ttcgccacca ccggtttgaa ggtgctggtg
     7801 aggatgccgg accctgcctg caacaacatg aaaccaatta tggttttaat cgtgccttta
     7861 ataataacgc tgacactttt gcgcagtagg atgtagccca gacaggtcac aatacccagc
     7921 aacaacgggg cattggtcat gacctggtta aaaaacacgg taaagatgtt gtagagacga
     7981 tctcctgaag aagaggtaac cgggtattcc gcacacccgg aatgttgtgc actcactcta
     8041 attttcaaaa gcaatcacaa caagattatt tatgattaaa tgtgacgcga cccgcaaata
     8101 attccatacg gatagagtgg gattcacaca acgaaacaat tatttattta aatttagtta
     8161 aattcattta gttaatttaa ctatacattc cattaaatct ttccacactc aaaatcaaca
     8221 acaacttccc tggcaaaaag tcaaaaaatg gtcattgcct tcctgaaaaa atagtgtcag
     8281 gattaatcaa aaccaatcac atattgattc gaattgaact atcatgaagg taaatggcga
     8341 tgagtaaagt gaaaagtatc acccgagaat cctggatcct gagcactttc ccggagtggg
     8401 gtagctggct gaatgaagaa attgaacaag agcaggtcgc ccctggcaca tttgcgatgt
     8461 ggtggctagg ctgcaccggg atctggttga aatcagaagg tggcaccaac gtttgcgttg
     8521 atttctggtg cggcactggc aaacaaagtc acggtaaccc gttaatgaaa cagggtcacc
     8581 agatgcagcg catggctggc gtgaaaaaac tgcagccaaa cctacgcacc cccccgtttg
     8641 ttcttgatcc gtttgcgatt cgccagatcg acgcggtact ggcgactcac gatcacaacg
     8701 atcatatcga cgttaacgtc gctgctgccg tgatgcagaa ctgtgctgat gacgtaccat
     8761 tcattggacc gaaaacctgc gttgatttgt ggattggctg gggcgtaccg aaagagcgtt
     8821 gcatcgtggt caaaccgggc gatgtggtga aagtgaaaga cattgaaatt catgcgcttg
     8881 atgctttcga ccgtactgca ctgatcaccc tgcctgccga tcaaaaagcg gctggcgtac
     8941 tgccggacgg catggacgat cgcgcggtga actatctgtt caaaacgcct ggcggctccc
     9001 tgtatcacag cggcgactcc cactactcta actattatgc gaagcacggt aacgaacatc
     9061 agatcgacgt ggctttaggt tcatacggcg aaaacccgcg cggtatcacc gacaaaatga
     9121 ccagcgccga tatgctgcgt atgggtgaag ccctgaatgc gaaagtggtt atcccgttcc
     9181 accacgatat ctggtcaaac ttccaggccg ctccgcaaga gatccgcgtg cagtgggaga
     9241 tgaaaaaaga tcgtctgaag tatggcttca agccgtttat ctggcaggtt ggcggcaaat
     9301 ttacctggcc actggataaa gacaacttcg agtaccacta tccgcgcggt ttcgatgatt
     9361 gcttcactat tgaaccggat ctgccgttca aatcattcct gtaatctgtc gtttataccg
     9421 gatagcgtgg agaagttcgc gctatccggc gtagtatttc ctggctattt caaatatcat
     9481 ctaaaaaaat caaattttat cggaatagct catgactgaa gcacaaagac atcaaatcct
     9541 cctggaaatg ctcgcacaat tgggctttgt gaccgttgag aaagtcgttg agcgtctggg
     9601 aatttcgcct gccactgcgc gacgcgatat caataaactt gacgaaagcg gcaaactcaa
     9661 aaaggtgcgc aatggcgcag aagctattac ccaacagcgc ccgcgctgga cgccgatgaa
     9721 tctgcatcag gcgcagaatc acgatgaaaa agtacgtatt gctaaagcgg cctcgcagct
     9781 ggttaatccg ggcgaaagcg tagtcatcaa ctgcggctcc accgcgtttc tgcttgggcg
     9841 ggaaatgtgt ggcaagccag tgcaaatcat cactaattat ctaccgctgg caaattacct
     9901 gatcgatcaa gaacatgaca gcgtgatcat tatgggtgga cagtacaaca aaagtcagtc
     9961 catcacttta agcccgcagg gcagcgaaaa cagtctctat gccgggcact ggatgtttac
    10021 cagcggaaaa gggctgaccg cagaagggtt gtataaaacc gatatgctga cagcaatggc
    10081 agagcagaag atgctgagcg tggtagggaa actggtggta ctggttgata gcagtaagat
    10141 tggcgaacgc gcgggaatgc tttttagccg tgccgatcaa atcgatatgc ttatcaccgg
    10201 caaaaatgct aacccggaaa tcctgcaaca actggaagcg caaggggtca gcattctgcg
    10261 tgtttaaaga tgctggcgga aaaatgtcac ggcagcatct aacgcctcag gcgtaatgcg
    10321 gtgacgcacg cctggctgcc atgaacaggt tagcagttta tcccgtcccg tctcgcttaa
    10381 ggcctgctgc aaacgtagtg attcgtcggc aggcacaacg tcatcgtcga ggccatgcca
    10441 cagcagtaga ggtctgtccc caagttgttc caggtggttt gtcgcttccc actctgccag
    10501 cggcgcgata atgttattga attcattctg ctgtgctgcc gtttcaggta tcagcggtgg
    10561 aaacagtgaa cgggcgagcg atgtaaaata gcccgatccc atcatgctgg cggtacattt
    10621 caccgtgggg tggcgagcgg taattcccag tgccgtcatc gcgcccatcg acgcgccacc
    10681 gactgccaga cggtcatcaa gcagccagtt ttcttcggct attgccgcac gtaaagtagt
    10741 gaattcctgc atactttgta gcaagatttg ccagaattga tttaaccgcc gcgcttcgtc
    10801 gctactaaaa cggctaccgt gatcgggcgc atccggcatg atcacccgca aaccagcctg
    10861 cgccagcgca acggcaaaat agctatacac caggctggat gaagtaaagc cgtgataaaa
    10921 aattacgcac ggtaacgggg tatctttttg cccgacagga taagcatgaa gaacgggaat
    10981 atctgccagc tcgcgtgatt ctatttcaat catctgtctc tcctttttgt ctggtatgac
    11041 atgaagaaat ccttagcaca agtttctgct ggcggtatta gttcataatg ttgagatgtg
    11101 ggttacgctt tcgtcacgtt ttcattcgaa aatcgcgtac caggtaacaa ttcgggaaca
    11161 ttcccccaaa gttaaattaa taaggcacta cactatggtt agcaggaaac gtaatagcgt
    11221 tatttaccgg tttgcctgtt tattattggt gttgatgtta agtgcctgta gcgcactgca
    11281 aggtacgcca cagccagcac cgccagtaac gaaccatccg caagagattc gccgcgacca
    11341 gacgcaaggg ttacagcgaa taggtagcgt aagcacgatg gttcggggtt ctccggatga
    11401 cgcattagca gaaatcagag caaaagctgt cgctgcaaaa gctgattatt acgttgtcgt
    11461 catggtggac gaaaccatcg tgacaggaca gtggtattca caagccattt tgtaccgtaa
    11521 ataaatcaga caacttacat agtcagcttt acattgcttt gcgtccctat gcgtttacct
    11581 gtgcacaata aattaccggc tggaagcctg ggcgtttatt accgcgatgg aatgccctgc
    11641 aacatgtggg gaaacgaaaa atggagctga cgatgaaaca attacttgct tcaccctcgc
    11701 tgcaattagt gacttatcct gcgagcgcca cggcacagtc tgcagaattc gccagtgctg
    11761 actgcgtgac gggcctgaat gaaataggtc agatctcagt tagcaatatt tcaggggatc
    11821 cgcaggacgt ggaacgtatc gtggcgttaa aggccgatga acaaggtgcg tcatggtacc
    11881 gcattattac catgtacgaa gaccagcagc ctgataactg gcgcgtacag gcgatactgt
    11941 atgcatgagt gtcatctaca gcaaatgaac aatgccggat tcggcgcgag cgccttgtcc
    12001 ggcctacaat tttcacatat ttcattgagt taatcgaaac cagcgtcgca tcagtcgtat
    12061 acgcttacac acacactccc cccgtcgccc gcagcaataa atcattctgg atctgctctg
    12121 acaaccgtac gccgccgcgc gtatctaaca tcacctgaca ccacgcctgc gccattggcg
    12181 gagaagcata tttcaacatt tgcgcaccgc agcccagcag gaatagctga tgagtaatct
    12241 ctcgccccag ttcttcagct ggcttacgca gctgctgctg taaacgacga accgcgcgat
    12301 caaaatagcg atcctgccct ttcacttcca caaatgcttc cgacaataag tcgtatacgc
    12361 ccgcttgctt attgagaacg cgcaacacat ccaggcacat aatattgccg gaaccttccc
    12421 aaatactgtt taccggcatc tcccggtaaa gccgcggcag ctcgctctcc tcgcaataac
    12481 caatgccgcc cagcacctcc atcgcttcgg ccacaaacgg catacctctt ttgcagatca
    12541 caaattttgc cgcaggcgta aataaacgcg cccacagggc ttctttggca tcggcacgcc
    12601 ggtcccacgc tcgcgcaaga cgaaacagca acgccgtttg cccttcaagc tgaagtgcca
    12661 tgcgacttaa gacatgacac ataaggggct gttggatcaa tggattacca aaaacatggc
    12721 gttgatgtgc atgataaatc gccagcgaaa atgcacggcg catcatggca tggctaccca
    12781 gggcgcaatc aaaacgcgtc atcccaccca ttttcaggat cagacgaatt ccttcccctt
    12841 cctgccccaa caaccagcca atggcatcct gaaactccac ttcgcaactg gcgttagagc
    12901 gattacccag cttatctttc agccgctcga ggcgaatcgc gttgcgttgc ccatcaggca
    12961 aaaagcgcgg cacaaaaaag caggacaaac cgcccgtagt ctgcgccagc accagatgcg
    13021 catcgctttg cggcaccgag aaaaaccatt tatgccccac cagccgataa gagccatctt
    13081 ccagacgctc tgcacgggtg gtgttgctca tgacatcgga accgccctgc ttttccgtca
    13141 ttcccatgcc aatcaacaaa ccgcgttttt gcccacctgg caataagaga gaatcgtagc
    13201 gatcgctcag cagcggcgtg gtccagtcct gaaacggcgt gggtaacatc tgtaacaaca
    13261 atggcgtggc ggcaaaggtc atcgttattg gacataacga cccagcctca acctgcgcat
    13321 gtaacataaa acgcgccgcg cgcgccacaa atgcgccgga gcgagcgtct tcttcccagg
    13381 caagattgtg cacccgattg gtacataacg cctgcatcag caggtgccag gcggggtgaa
    13441 aacgcacatc gtccagacgg cgtccttgcg catcgtagcg caataattca ggcggattca
    13501 cattcgccag ccgccccagt tcaagagatt cagccgttcc taactgctga ccaatactgg
    13561 ctagaaaatc gctatcccag ccagcacctt cacgcgttac cgcttcacag agcgcgccat
    13621 cagacaggta taagttgctg ttatttaatg gtataggttg attaaaaacg gtgtgagttt
    13681 gccagtgcac tgtgtctccc tccatcaatg gcagtcaccc ttagtatggt cactgccatg
    13741 gattcctgac agaaagagat tgctaaaaca ttcttatcca gcaatgtaat gcggaacgaa
    13801 acgtgaggtg tctttggtga tcagcgtgtt atcttcacgg atccccattc cgcacgcttc
    13861 atcatcgaca atccagctac cgatgagtgt gtagctatcg ccaaatcgcg gcagaggttg
    13921 aaacgcctgg tagatcatcg gttcatcggc gtaatcacca tcagcgtggt caacgacgtt
    13981 attctgaccg tcgaaaatgg tgacgtttcc gccttcgcgt gagtagatcg gtttacgcac
    14041 atagctttcg ccagcggcaa tctgcggttt ttcgccctca aaccaggatg caagaaggtt
    14101 aggatgacca ggaaagaagc gccaaagcag cggcattagc cctttattac tcaagatact
    14161 tttccataac ggctccaccc attgctcgcg acgcttgcgc agcagcggac cgttatcgtc
    14221 acgcatcatc cactccagcg gatacagctt aaatgcacgc tggatgacat tatcatcaag
    14281 atcggtcagt acgccgccga cgcccaaacc gagatcttca atgtagataa accgcgactc
    14341 ctgccctgcc tgctgggcgc agtcctgcaa gtacagcacg gtactcctgt cttcatcggt
    14401 gtcctgacag cagcaaaaat aaaacggttc ccgactgtaa agctcactaa agcgcgaaat
    14461 caggcgttcc tgaatggcgt tgtactccag cagcttcacc ggcgcattgc cacaccaggc
    14521 aaaatccatc cggccataca gcgaaggatc gcgtgcgcgc cagctttcgg cgatcacatc
    14581 ccagtacaac ggcgggatcg ccagttgcgt caggatctct tcgtctttaa ccgcgcgatc
    14641 caccacctca aggcacatct gatgcagttc cgcagtcggt ttttcgatct gctcttcaat
    14701 ctggcgcaga gtaaaacggt aagcccgact ctcgtcccaa tagatttcat tgtcgatgat
    14761 atgaaagtcg aaaccgttgt tagcggcgat ctggtccaga tcccgtcgca caggaacgtt
    14821 gtgtctcagc atgattagcc tccccaatgc ccacgggcgc tggaagaacg accatagccg
    14881 ccgcgcgaaa cggttgacgc ttttttggtg gtaaagccgc ctgaagagta agactctttt
    14941 ttgccagaac cggagcgcca ggagtaatca ccggaagtgt tgagccagac ggggcgggaa
    15001 gcaaatgagg atccgccgct gttatagacg aacggctcat cgcgatcttt acgaataacc
    15061 cggcttaaca aaaatccaga aacgaccggg atccaactct gttcaacatt gtcgtagtag
    15121 caattttcgt acttagactg acaattctgc tgagtcatat tcttcggaac atcggcataa
    15181 aatgccgctt tggcgttgtt ccagccacgc gcgcaaatgt cggcattatt accgtcatca
    15241 atacaatcct gcactgtcga ataaaacgtt ccgtcgccgt cgttatcgac atcgccacta
    15301 tcgccacaac ctttcaatac aaaaaaagcg gcaccgccca ttagcgccaa cgttaagtat
    15361 ttttgtgcgt agcgattgcg acgcggttca aaaggattat tcggtctacc aatgcgactg
    15421 atcgctccgt gaccaatttt actgttattt cttgatttgc gttttctggc catgatcgtc
    15481 cattaccatg tcatacaagc tgcgttaaaa ataccgccag ccagcgcggc ggttcccata
    15541 aacattcctg ctgcggtatt gtgattaata attttttcgc ttaatgcggg catataaagt
    15601 ctgacaccag caaaaacgag taactgaatc accagtgcaa tcccgcccca ggcgaaatag
    15661 tctggaatac tcaccgcatt gattgccgca ctggataagg ggatcacgta acccaacaat
    15721 gtaccgctga atgccagtga caccgcggta ttattgtttt tgattaattg ccattcgttg
    15781 tgcggtgtaa ttttggagta gataaacaga aaaataatca ccatagccac gccaataaaa
    15841 aaataggcac taaaggcaag aagtgaatcc agtatatgca ttgtaaacgt ccttgtaatt
    15901 aaccaataat atgaagtgat gtcagcggga tatcgacacc caacgcgcgc gaaaataacc
    15961 actctggctc gccgagatcg ttaaaagatt cctcaccatt taacagtaaa tattcgtaag
    16021 tatcttcggt tacttgccgc tggtagccca tggtaaaatt atggacctcc catttggcat
    16081 ggttttgatt ttctactttt tccagcatgt agacgggttc gatatttccc ggttcttcgc
    16141 tgttaaaaaa tcgctgccag cgtttttcct gccagtttaa ggtcattgcc cccatcgttt
    16201 tggcgttgat cgcctcgcgc cagtgactct ctttactgat accgtagctc tcttcataga
    16261 caaagagctt gatatcatca atgtcatcaa tatcttcgcc gccggtggta ttgatttgca
    16321 gaaattcatc gcctgaagtg tagtaacgga aaatctggct accgcctccc agatcgatgc
    16381 ggctgacagc ggctaccgta aattcctcac ccggtagcgc aatcagcaat tcatcttcca
    16441 gcaaacgaaa cgctaacgtg tcgagcgtaa agccactatt gagatgaagt cccagcggac
    16501 cgcgagcgat agcaggctta ttatccttgc caaacagacg ctggaaaaaa ccagacatat
    16561 tttatcctta aaatagttgc cagcctttta gcgaggctgg caaaaaaatt actcgccctg
    16621 ttggcgttgc agtcttgcta atacatcctg ggctctactt ttattgctac cgccaattcc
    16681 ggcttccgcc agcttttcgt caaggtcgcg accgtctgcg actttctcca actgtgcggc
    16741 agcatccagg cgagcctgac gttcggcctg acgcgtttgc aggcgtttta aggattctgc
    16801 cgctgtcgaa acgctggaag atgcgccaac ggtagaggtt gttacagcct gttgtgcacg
    16861 ctgcatggct tcagtggctt taacgacttc catttgctgc tcaaactgag cgatacgctg
    16921 cgctgtcgct gtaactgctt tttccacgcc atcacgggag acttccagat tcgacaacac
    16981 ttgctcttca gcggtaatga gattctcaag gcgcgcgatt tcttcagcaa cttcgttaat
    17041 caacgacgga ttaacgttct tgcttaacgc ttccagcgca cgggcttcca gactggcttt
    17101 gcgctcacgt aaatctttca gcttatcgtg acttaatttc acccgcgcca gcagatcaac
    17161 gcgagatttt ccggctttat cgagttcagc tttagcgtca cgaatatgct gttccagcat
    17221 gcgcacgccc tgggtttctt caatggattc ttccgcctgg gagataaacg atttccccag
    17281 cgtaaataaa ctttttaaaa ttcccataaa tacccgtcct tgtaattagt gtgaatattc
    17341 ttctgtaatt tcagccagat ccaatgcgtt atctaccagc taggttatct caagcaggat
    17401 atcttcaaga gaagatttaa gcgataacgc cccgaaaaca atgtaatact cttcctgttg
    17461 cacgctggag attcctaccg atgacaacgg catcatcttc tga
//
LOCUS       DADMJE010000080        17500 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.081, whole genome shotgun sequence.
ACCESSION   DADMJE010000080 DADMJE010000000
VERSION     DADMJE010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17500)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17500)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17500
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.081"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..321)
                     /locus_tag="JN001_002408"
     CDS             complement(<1..321)
                     /locus_tag="JN001_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BAX inhibitor (BI)-1/YccA family protein"
                     /protein_id="HAY9053610.1"
                     /translation="MESYSQNSNKLDFQHETRILNGIWLITALGLVATAGLAWGAKYL
                     EITATKYDSPTMYVAIGLLLVCMYGLSKDINKINAVIAGVIYLFLLSLVAIVVASLVP
                     VYAII"
     gene            complement(527..1231)
                     /locus_tag="JN001_002409"
     CDS             complement(527..1231)
                     /locus_tag="JN001_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HAY9053611.1"
                     /translation="MDRFPRSDSIVQPRAGLQTYMAQVYGWMTVGLLLTAFVAWYAAN
                     SAAVMELLFTNRVFLIGLIIAQLALVIVLSAMIQKLSAGVTTMLFMLYSALTGLTLSS
                     IFIVYTAASIASTFVVTAGMFGAMSLYGYTTKRDLSGFGNMLFMALIGIVLASLVNFW
                     LKSEALMWAVTYIGVIVFVGLTAYDTQKLKNMGEQIDTRDTSNLRKYSILGALTLYLD
                     FINLFLMLLRIFGNRR"
     gene            complement(1368..1820)
                     /gene="moaE"
                     /locus_tag="JN001_002410"
     CDS             complement(1368..1820)
                     /gene="moaE"
                     /locus_tag="JN001_002410"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase catalytic subunit MoaE"
                     /protein_id="HAY9053612.1"
                     /translation="MAETKIVVGPQPFSVGEEYPWLAERDEDGAVVTFTGKVRNHNLG
                     DSVKALTLEHYPGMTEKALAEIVDEARNRWPLGRVTVIHRIGELWPGDEIVFAGVTSA
                     HRSSAFEAGQFIMDYLKTRAPFWKREATPEGDRWVEARESDQQAAKRW"
     gene            complement(1822..2067)
                     /gene="moaD"
                     /locus_tag="JN001_002411"
     CDS             complement(1822..2067)
                     /gene="moaD"
                     /locus_tag="JN001_002411"
                     /EC_number="2.8.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin synthase sulfur carrier subunit"
                     /protein_id="HAY9053613.1"
                     /translation="MIKVLFFAQVRELVGTDATEVAADFPTVEALRQHMAAQSDRWAL
                     ALEDGKLLAAVNQTLVSFDHPLTDGDEVAFFPPVTGG"
     gene            complement(2060..2545)
                     /gene="moaC"
                     /locus_tag="JN001_002412"
     CDS             complement(2060..2545)
                     /gene="moaC"
                     /locus_tag="JN001_002412"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HAY9053614.1"
                     /translation="MSQLTHINAAGEAHMVDVSAKAETVREARAEAFVTMRSETLAMI
                     IDGRHHKGDVFATARIAGIQAAKRTWDLIPLCHPLMLSKVEVNLQAEPEHNRVRIETL
                     CRLTGKTGVEMEALTAASVAALTIYDMCKAVQKDMVIGPVRLLAKSGGKSGDFKVEAD
                     D"
     gene            complement(2548..3060)
                     /gene="moaB"
                     /locus_tag="JN001_002413"
     CDS             complement(2548..3060)
                     /gene="moaB"
                     /locus_tag="JN001_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein B"
                     /protein_id="HAY9053615.1"
                     /translation="MSQVSTEFIPTRIAILTVSNRRGEEDDTSGHYLRDSAQEAGHHV
                     VDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLTEGDQAPEALLPLFDREVEGF
                     GEVFRMLSFEEIGTSTLQSRAVAGVANKTLIFAMPGSTKACRTAWENIIAPQLDARTR
                     PCNFHPHLKK"
     gene            complement(3082..4071)
                     /gene="moaA"
                     /locus_tag="JN001_002414"
     CDS             complement(3082..4071)
                     /gene="moaA"
                     /locus_tag="JN001_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HAY9053616.1"
                     /translation="MASQLTDAFARKFYYLRLSITDVCNFRCTYCLPDGYKPSGVTNK
                     GFLTVDEIRRVTRAFASLGTEKVRLTGGEPSLRRDFTDIIAAVRENDAIRQIAVTTNG
                     YRLERDVANWRDAGLTGINVSVDSLDARQFHAITGQDKFNQVMAGIDAAFEAGFEKVK
                     VNTVLMRDVNHHQLDTFLNWIQHRPIQLRFIELMETGEGSELFRKHHISGQVLRDELL
                     RRGWIHQLRQRSDGPAQVFCHPDYAGEIGLIMPYEKDFCATCNRLRVSSIGKLHLCLF
                     GEGGVNLRDLLEDDTQQQALEARISAALREKKQTHFLHQNNTGITQNLSYIGG"
     regulatory      complement(4059..4203)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01055"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="molybdenum cofactor riboswitch; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /bound_moiety="molybdenum cofactor"
                     /db_xref="RFAM:RF01055"
     gene            4468..5376
                     /gene="yvcK"
                     /locus_tag="JN001_002415"
     CDS             4468..5376
                     /gene="yvcK"
                     /locus_tag="JN001_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine diphosphate-N-acetylglucosamine-binding
                     protein YvcK"
                     /protein_id="HAY9053617.1"
                     /translation="MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDN
                     GGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLK
                     ALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTP
                     IQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMV
                     YIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVL
                     EASDIPYRHDRQLLHNALEKALQALG"
     gene            complement(5568..7589)
                     /gene="uvrB"
                     /locus_tag="JN001_002416"
     CDS             complement(5568..7589)
                     /gene="uvrB"
                     /locus_tag="JN001_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit B"
                     /protein_id="HAY9053618.1"
                     /translation="MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSG
                     KTFTIANVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYV
                     PSSDTFIEKDASVNEHIEQMRLSATKAMLERRDVVVVASVSAIYGLGDPDLYLKMMLH
                     LTVGMIIDQRAILRRLAELQYARNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFD
                     EEVERLSLFDPLTGQIVSTIPRFTIYPKTHYVTPRERIVQAMEEIKEELAARRKVLLE
                     NNKLLEEQRLTQRTQFDLEMMNELGYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGL
                     LVVDESHVTIPQIGGMYRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYV
                     SATPGNYELEKSGGDVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
                     VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVLVGINLLRE
                     GLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKAILYGDKITPSMAKAIG
                     ETERRREKQQKYNEEHGITPQGLNKKVVDILALGQNIAKTKAKGRGKSRPIVEPDNVP
                     MDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQLHQLRELFIAAS"
     gene            complement(8168..8845)
                     /gene="bioD"
                     /locus_tag="JN001_002417"
     CDS             complement(8168..8845)
                     /gene="bioD"
                     /locus_tag="JN001_002417"
                     /EC_number="6.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706656.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent dethiobiotin synthetase BioD"
                     /protein_id="HAY9053619.1"
                     /translation="MSKRYFVTGTDTEVGKTVASCALLQAAKAVGYRTAGYKPVASGS
                     EKTPEGLRNSDALALQHNSSLQLDYATVNPYTFAEPTSPHIISAQEGRPIESLVMSAG
                     LRALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQEQLPVILVVGVKLGCINHAMLTA
                     QAIQHAGLTLAGWVANDVTPPGKRHAEYMTTLTRMIPAPLLGEIPWLAENPENAATGK
                     YINLALL"
     gene            complement(8838..9593)
                     /gene="bioC"
                     /locus_tag="JN001_002418"
     CDS             complement(8838..9593)
                     /gene="bioC"
                     /locus_tag="JN001_002418"
                     /EC_number="2.1.1.197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-ACP O-methyltransferase BioC"
                     /protein_id="HAY9053620.1"
                     /translation="MATVNKQAIAAAFGRAAAHYEQHAELQRRSADVLLAMLPQRKYT
                     HVLDAGCGPGWMSRHWRERHAQVTALDLSPPMLVQARQKDAADHYLAGDIESLPLATA
                     TFDLAWSNLAVQWCGNLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERP
                     HANRFLPPDEIEQSLNGVHYQHHIQPITLWFDDALSAMRSLKGIGATHLHEGRDPRIL
                     TRSQLQRLQLAWPQQQGRYPLTYHLFLGVIARE"
     gene            complement(9580..10734)
                     /gene="bioF"
                     /locus_tag="JN001_002419"
     CDS             complement(9580..10734)
                     /gene="bioF"
                     /locus_tag="JN001_002419"
                     /EC_number="2.3.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-amino-7-oxononanoate synthase"
                     /protein_id="HAY9053621.1"
                     /translation="MSWQEKINAALDARRAADALRRRYPVAQGAGRWLVADDRQYLNF
                     SSNDYLGLSHHPQIIRAWQQGAEQFGVGSGGSGHVSGYSVAHQALEEELAEWLGYSRA
                     LLFISGFAANQAVIAAMMAKEDRIVADRLSHASLLEAASLSPSQLRRFVHNDVTHLAR
                     LLASPCPGQQLVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRG
                     SCWLQKVKPELLVVTFGKGFGVSGAAVLCSSTVADYLLQFARHLIYNTSMPPAQAQAL
                     RASLAVIRRDEGDARREKLVSLIARFRAGVQDLPFTLADSCSAIQPLIVGDNSRALQL
                     AEKLRQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGNG"
     gene            complement(10731..11771)
                     /gene="bioB"
                     /locus_tag="JN001_002420"
     CDS             complement(10731..11771)
                     /gene="bioB"
                     /locus_tag="JN001_002420"
                     /EC_number="2.8.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin synthase BioB"
                     /protein_id="HAY9053622.1"
                     /translation="MAHRPRWTLSQVAELFEKPLLDLLFEAQQVHRQHFDPRQVQVST
                     LLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESARKAKAAGSTRFCMGAAW
                     KNPNERDMPYLEQMVQGVKDLGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTSPEF
                     YGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPES
                     VPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMC
                     FMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAVLAGDNEQQQRLEQALMT
                     PDTDEYYNAAAL"
     gene            11858..13147
                     /gene="bioA"
                     /locus_tag="JN001_002421"
     CDS             11858..13147
                     /gene="bioA"
                     /locus_tag="JN001_002421"
                     /EC_number="2.6.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine--8-amino-7-oxononanoate
                     transaminase"
                     /protein_id="HAY9053623.1"
                     /translation="MTKDDLAFDQRHIWHPYTSMTSPLPVYPVVSAEGCELILSDGRR
                     LIDGMSSWWAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQP
                     LECVFLADSGSVAVEVAMKMALQYWQAKGEVRQRFLTFRNGYHGDTFGAMSVCDPDNS
                     MHNLWKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAG
                     GMRMYHPEWLKRIRKMCDREGILLIADEIATGFGRTGKLFACEYAEIAPDILCLGKAL
                     TGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQ
                     QVAAIEVQLREQLAPARDAEMVADVRVLGAIGVVETTRPVNMAALQKFFVEQGVWIRP
                     FGKLIYLMPPYIILPQQLQRLTAAVNRAVQDETFFCQ"
     gene            13206..13682
                     /locus_tag="JN001_002422"
     CDS             13206..13682
                     /locus_tag="JN001_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase inhibitor"
                     /protein_id="HAY9053624.1"
                     /translation="MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTK
                     SFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTG
                     YDGAAPPKGETHRYIFTVHALDVEHIDVDEGASGAMVGFNVHFHSLASASITAMFS"
     gene            13834..15117
                     /locus_tag="JN001_002423"
     CDS             13834..15117
                     /locus_tag="JN001_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative acyl-CoA thioester hydrolase"
                     /protein_id="HAY9053625.1"
                     /translation="MNTFSVSRLALALAFSVTLTACSSTPPDQRPSDQTAPGTSSRPI
                     LSAKEAQNFDAQHYFASLTPGAAAWNPSPITLPAQPDFVVGPAGTQGVTHTTIQAAVD
                     AAIIKRTNKRQYIAVMPGEYQGTVYVPAAPGGITLYGTGEKPIDVKIGLSLDGGMSPA
                     DWRHDVNPRGKYMPGKPAWYMYDSCQSKRSDSIGVLCSAVFWSQNNGLQLQNLTIENT
                     LGDSVDAGNHPAVALRTDGDQVQINNVNILGRQNTFFVTNSGVQNRLETNRQPRTLVT
                     NSYIEGDVDIVSGRGAVVFDNTEFRVVNSRTQQEAYVFAPATLSNIYYGFLAVNSRFN
                     AFGDGVAQLGRSLDVDANTNGQVVIRDSAINEGFNTAKPWADAVISNRPFAGNTGSVD
                     DNDEIQRNLNDTNYNRMWEYNNRGVGSKVVAEAKK"
     gene            complement(15258..17495)
                     /locus_tag="JN001_002424"
     CDS             complement(15258..17495)
                     /locus_tag="JN001_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000477909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydratase"
                     /protein_id="HAY9053626.1"
                     /translation="MFLASNNEIIAEEHFTGEIKKEEAKKGTIAWSILSSHNTSGNMD
                     KLKIKFDSLASHDITFVGIVQTAKASGMERFPLPYVLTNCHNSLCAVGGTINGDDHVF
                     GLSAAQRYGGIFVPPHIAIIHQYMREMMAGGGKMILGSDSHTRYGALGTMAVGEGGGE
                     LVKQLLNDTWDIDYPGVVAVHLTGKPAPYVGPQDVALAIIGAVFKNGYVKNKVMEFVG
                     PGVSALSTDFRNSVDVMTTETTCLSSVWQTDEEVHNWLALHGRGQDYCQLNPQPMAYY
                     DGCISVDLSAIKPMIALPFHPSNVYEIDTLNQNLTDILREIEIESERVAHGKAKLSLL
                     DKVENGRLKVQQGIIAGCSGGNYENVIAAANALRGQSCGNDTFSLAVYPSSQPVFMDL
                     AKKGVVADLIGAGAIIRTAFCGPCFGAGDTPINNGLSIRHTTRNFPNREGSKPANGQM
                     SAVALMDARSIAATAANGGYLTSASELDCWDNVPEYAFDVTPYKNRVYQGFVKGATQQ
                     PLIYGPNIKDWPELGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEF
                     TLSRRDPGYVGRSKATAELENQRLAGNVSELTEVFARIKQIAGQEHIDPLQTEIGSMV
                     YAVKPGDGSAREQAASCQRVIGGLANIAEEYATKRYRSNVINWGMLPLQMAEVPTFEV
                     GDYIYIPGIKAALDNPGTTFKGYVIHEDAPVTEITLYMESLTAEEREIIKAGSLINFN
                     KNRQM"
BASE COUNT         4092 a         4734 c         4442 g         4232 t
ORIGIN      
        1 gataatggca tatacaggaa ctaaacttgc aacgacaatc gccaccaaag agagtaaaaa
       61 cagatatatt acgcctgcga tgacggcatt tatcttgttg atatccttac ttaagccata
      121 catacaaact aataataacc ctatggcgac atacattgtt ggtgaatcat atttggttgc
      181 cgtaatttcg agatacttag ctccccaggc cagtcctgcg gttgccacca aacctaaagc
      241 ggtaatgagc catataccgt ttaatatcct ggtctcgtgc tgaaaatcta atttattgct
      301 gttttgtgag tatgattcca ttcttttagt tgtccttaga aaaaatatta atattcacca
      361 tcaataaatt taaacccacg catacaaaat acttttgtat ttatggatac ggaaaacgct
      421 tccgctcggc cataaggcgt attttatacc tggtacttgt taagtgtcgt ttttagtaag
      481 aaaagaaatc ccgacacatg gccgggatat tgatggtgaa aaagaattaa cggcggttgc
      541 caaaaattcg cagcaacatc aggaacaggt tgatgaagtc cagatacaag gttaacgcgc
      601 caagaatgga atatttgcgc aggttcgacg tgtcgcgggt atcaatctgc tcacccatat
      661 ttttcaattt ctgagtgtca tacgccgtca atccgacaaa gacaatcacg ccgatgtagg
      721 taactgccca catcaatgct tcgcttttca gccagaagtt gaccagcgat gccagcacaa
      781 tgccgattaa cgccataaac agcatattgc caaagccact taaatcgcgc ttcgtggtgt
      841 aaccgtacag gctcattgcg ccgaacatcc cggcagtaac gacgaaagta ctggcgatag
      901 aagcagcggt atagacaatg aatatactgg aaagcgtaag acccgtcagc gccgaataaa
      961 gcataaagag catcgtcgtt acacctgcgc tcagcttttg aatcatcgct gataacacaa
     1021 taaccaatgc taattgcgcg atgatcagac cgattaaaaa gacacggtta gtgaacaaca
     1081 gctccatcac ggccgcggaa ttagccgcat accaggcaac aaatgcggtc agcaacaagc
     1141 caacggtcat ccagccatag acttgcgcca tataagtttg caagccagcc cggggttgta
     1201 cgattgaatc agaacgtggg aatctgtcca tgacgatctc ctgaagatat aaggaatatc
     1261 ttaaggatac tgcaaaatga tgaggctgtg catcgacgca gcgtaaacgc atgtactgag
     1321 cggtgaaatt gccggacgca gcggtgcctt atccggctaa caaaaaacta ccagcgtttt
     1381 gccgcctgct gatcgctctc ccgagcttca acccagcggt cgccttccgg cgtggcttcg
     1441 cgcttccaga acggtgcgcg ggttttgaga taatccataa taaactgccc ggcttcaaac
     1501 gcactgctgc gatgcgcact ggtgacaccg gcaaaaacga tttcatcgcc cggccataat
     1561 tccccgatgc ggtgaatcac agtgacgcgc cccagcggcc agcggttacg cgcttcatca
     1621 acaatttctg ccagtgcttt ttcagtcatt cccggatagt gttcgagggt taatgctttg
     1681 acgctgtcgc ccaggttatg gttgcgcacc ttaccagtaa aggtgactac cgcaccgtct
     1741 tcgtcacgct ccgccagcca cgggtactct tctcctacgc tgaacggctg cggaccaaca
     1801 acaattttgg tttctgccat cttaacctcc ggttaccggc gggaagaaag ctacttcgtc
     1861 gccgtcagtc agcggatggt caaaactcac cagcgtctgg ttgacggcag ccagtaattt
     1921 gccatcttcc agcgccagcg cccagcgatc gctctgcgca gccatgtgct ggcgtaacgc
     1981 ttcaacagtt gggaaatccg cagccacttc ggttgcatct gttcccacca actcgcgcac
     2041 ctgcgcgaaa aaaagaactt taatcatccg cttccacctt aaagtcaccc gacttgccgc
     2101 cgctcttcgc cagcaaacgt accggaccaa tcaccatatc tttttgcacc gctttgcaca
     2161 tgtcataaat ggtcagcgcc gccacggagg ccgcggttaa tgcttccatt tcgacaccgg
     2221 ttttcccggt caggcggcat aaggtttcta tacgcacccg attgtgctcc ggctcggcct
     2281 gtaaattgac ttcaactttg ctgagcatca gcggatgaca gagcgggatc agatcccagg
     2341 tgcgttttgc cgcctgaata ccggcaatac gcgcagtggc aaatacgtcg cctttgtggt
     2401 ggcgaccatc aataatcatc gccagcgtct cgctgcgcat ggtgacaaag gcttccgccc
     2461 gcgcttcacg cacggtttcc gctttggcgg agacatccac catgtgcgct tcgccagcgg
     2521 cgttgatatg ggtcagttgc gacatactta tttcttcaaa tgtggatgga aattacacgg
     2581 acgcgtacgg gcatccagct gcggcgcgat gatattttcc catgcggtac ggcacgcttt
     2641 ggtcgaaccc ggcatggcga aaatcagcgt tttgttggcg acgcccgcaa ccgcacgaga
     2701 ttgcaacgtg gaagtgccaa tctcttcaaa cgacaacatc cggaacactt caccaaaacc
     2761 ttcaacttca cggtcgaaca acggcagcaa tgcttcggga gcctgatcac cttccgtcag
     2821 gccagtacca cccgtaatca ataccacttg tacatcgtcg ctggcgatcc acgcagatac
     2881 ctgagcgcga atagcgtagc ggttttcttt cacaatggct ttatcgacaa cgtgatggcc
     2941 cgcttcttgc gccgaatcgc gcagatagtg accggaggta tcgtcttctt caccgcgacg
     3001 attagaaacc gtaagaatag caatacgggt cgggataaat tcagtgctta cctgactcat
     3061 ctgatctctc cttttgacgt tttagccgcc aatgtacgat aagttttgcg taataccggt
     3121 gttgttttga tgcaggaaat gggtctgttt cttctcccgc agcgccgctg aaatacgcgc
     3181 ttccagcgcc tgttgctggg tatcgtcttc cagcagatcg cgcaggttaa cgccgccttc
     3241 accaaacagg cagagatgga gtttaccaat ggaggaaacg cgcaggcggt tgcaagtggc
     3301 gcagaagtct ttttcatacg gcatgataag gccaatctct ccggcgtaat ctggatggca
     3361 aaagacttgc gcgggaccgt cgctgcgttg acgtaattgg tggatccagc cgcgacgcag
     3421 tagctcgtca cgcagaacct gaccagagat gtgatgctta cggaagagct cgctgccctc
     3481 gcccgtttcc atcagttcga tgaaacgcag ctggataggg cgatgctgga tccagttcag
     3541 aaaggtgtcg agctggtgat gattaacatc acgcatcagc acggtattga ctttgacctt
     3601 ctcaaaaccg gcctcaaatg cagcatcaat ccctgccatg acctggttga atttatcctg
     3661 cccggtaata gcgtgaaact ggcgggcgtc cagactgtcg acactgacgt taatgccagt
     3721 aagtcccgca tcgcgccagt tcgccacatc gcgttccaga cggtaaccat tggtggtgac
     3781 cgcaatctgg cggatagcgt cgttttcccg cacagcggcg atgatatcgg taaagtcgcg
     3841 gcgtaaagac ggctcacctc ctgtcaggcg cactttttcg gtgcccagac tggcgaaggc
     3901 gcgcgtaacc cggcgaattt catcgacggt aagaaagcct ttattggtga cgccgctcgg
     3961 tttgtagcca tccggcaggc agtaggtgca acgaaagtta cacacatcgg taatcgacag
     4021 gcgcaagtag taaaacttac gcgcaaatgc atcagtcagt tgtgaagcca tgtacacctt
     4081 tccagatacg ggaggcgaag tcatttcttc cttcgccctg gtggcaatct ttacgagcat
     4141 tgtcacggcc aaagcaccgt atcagttgac ccaggtgcag aggctagagt gtttagtggt
     4201 taagccgata ctagcgtgta aatgagattt ttaccatcca cactttcgct atgcaatcat
     4261 gtatatagcg tcatgatcgt gctatttcgc tacagaataa gggaaaatgg cagttttact
     4321 ttgatataca tcatcaggga ggcatagcgt gcatcgtcct ttagaggtag aagaaaatag
     4381 tttgtatcct caatattggc aggttaattg ctgtttcccc gcaatttgcg ctactgtagc
     4441 gcggataatc tgactccagg aaactatatg cgcaatcgta cgctggctga tcttgatcgt
     4501 gtcgttgctc tcggcggagg gcatggactg ggacgcgttc tctcatcact ttcgtctttg
     4561 ggttctcgtt taacgggtat cgtcaccacc acggataatg gtggctcgac ggggcgtatt
     4621 cgccgttcag aaggcggcat tgcctggggc gatatgcgca actgcctcaa ccaactgata
     4681 acggaaccga gcgtcgcctc cgcgatgttt gaataccgtt ttggcggcaa tggcgaactt
     4741 tccgggcaca accttggaaa cttgatgtta aaggcgctgg atcaccttag cgtgcggcct
     4801 ctggaagcca tcaatttaat tcgtaatctg ctgaaagtgg atacgcattt gattccaatg
     4861 tcagagcatc ccgtcgatct gatggcgatt gacgatcagg ggcatgaagt ttacggcgag
     4921 gtcaatatcg accagttaac tacgccgatt caagagttat tattaacgcc gaatgtaccc
     4981 gcaacgcgtg aggcagttca cgctatcaat gaagcggatc tcatcattat tgggcctggc
     5041 agtttttata ccagcctgat gccaattctg ctgctgaagg aaatcgccca ggcattacgc
     5101 cgcacgccag cgccgatggt ttatatcggc aatctggggc gtgagttgag tttacctgcg
     5161 gctaatttga agctggaaag caagctggca attatggagc agtatgttgg taaaaaagtc
     5221 attgatgcgg tcatcgtcgg gccaaaagtg gatgtctcgg cggtgaaaga gcggattgtg
     5281 atccaggagg tactggaggc cagcgatatt ccgtatcgtc atgaccgcca gttgttacat
     5341 aacgcgctgg aaaaggcgtt acaggcttta ggttaacgga aatccgaagg aaaattccgg
     5401 cttcctattg aagacaaagt gcgcgttgtt tatgccggat gcggcgtgaa cgccttatcc
     5461 ggcctacaaa ccgcgcaaat tcaatatatt gcggagaaaa tgtaggcctg ataagcgtag
     5521 cgcatcaggc tgttttccgt ttgtcatcag tcttcttcgc tatcctgtta cgatgcggca
     5581 ataaacaact cacgcaactg atgcaactgg tcacgaattt gtgccgcttc ttcgaactcc
     5641 agattctgcg cgtgttgcat catcagccct tccagttcat ggattttctg ctgcaacgct
     5701 ttcggcgaca tatccatcgg cacattatcc ggctcaacaa tcgggcgcga ttttcctctg
     5761 cccttcgctt tggttttggc aatgttctgc cccagcgcca ggatatcgac cactttcttg
     5821 ttcaagcctt gcggcgtaat gccgtgttcc tcgttgtact tctgctgttt ctcacggcga
     5881 cgttcggttt cgccaatcgc tttcgccatt gatggggtga tcttatcgcc gtagagaatc
     5941 gctttaccgt taacgttacg tgccgcacga ccaatggtct ggatcaacga acgttcggaa
     6001 cgcaggaagc cttctttgtc agcgtcgagg atcgccacca gcgacacttc cggcatatcc
     6061 agaccttcgc gcagtaagtt gatccctacc agcacgtcga actcacccag acgcaagtcg
     6121 cggataatct ccatacgttc gacggtgtcg atatctgagt gaagataacg cacgcgctcg
     6181 ccatgttctt cgagatattc ggtaagatct tccgccatcc gcttggtcag tgtggtgacc
     6241 agtacgcgtt cgttaattgc cgctcgctga cgaatctccg aaagaagatc atcaacctgt
     6301 gtcgccaccg gccgcacttc gataatcggg tcaagcaatc cggttggacg caccacctga
     6361 tccaccacat cgccgccgga tttttccagc tcgtaattac ccggcgtcgc cgaaacatag
     6421 atggtttgcg gcgctaatgc ttcgaactct tcaaacttaa gcggacggtt atccagcgct
     6481 gatggcaggc ggaagccgta ctccaccagt gtctctttac gcgcccggtc accgcgatac
     6541 atgccgccaa tttgtggaat ggtgacgtga gattcatcga cgaccagcag cccatcggca
     6601 ggcaggtaat caaacagcgt cggcggtggc tcacccggtc cacgaccgga gaggaagcgc
     6661 gagtagtttt caatccccga acagtagccc agctcgttca tcatctccag atcaaactgg
     6721 gtacgctggg tcagccgctg ctcttccagc agtttgttgt tttccaacag cactttgcgt
     6781 ctggcggcca gttcttcttt gatctcctcc atcgcctgta cgatgcgctc gcgcggtgtg
     6841 acgtagtgcg ttttcgggta gatggtaaaa cgtggaatag tggaaacaat ctgcccggtc
     6901 agcgggtcaa ataacgacaa tcgttccact tcctcgtcaa acagttccac gcgaagtgca
     6961 atgtcatccg attctgccgg gaagatatca atcacctcgc cacgaacgcg gaaagtacca
     7021 cgctggaatg cttgatcatt acgagcgtat tgcagctccg ccagtcggcg cagaatcgcg
     7081 cgctgatcga taatcatacc gaccgtgaga tggagcatca tcttgagata taaatcagga
     7141 tcgcccagac cataaatcgc ggaaacagag gccactacaa ccacatcacg ccgctccagc
     7201 atcgctttgg tggcggataa acgcatctgc tcaatatgtt cgttaaccga ggcatctttc
     7261 tcaatgaaag tgtcggaact cggtacatag gcttccggct gatagtagtc gtagtaggag
     7321 acgaaatact ccaccgcgtt ttccgggaag aactctttca tttcgccata cagctgggcc
     7381 gccagcgttt tgttgggcgc aagtaccatg gttgggcgct gaaggtcagc aatgacattg
     7441 gcaatggtga aggttttccc tgagccagtc acgccaagta acgtctggtg cgccaggcca
     7501 tcttccagcc cctcttcgag acgtcgaatc gcctctggct gatcgccaga aggtttaaaa
     7561 gcggaattca gtttgaacgg tttactcatg agtcgctacc tgaaggagtt gggcgggcag
     7621 gtatgtaatt ttactcgtcg tacttaatta tgccaacaaa ttatactgga taaaaaaaca
     7681 gttcatcacc ataatatttc tgatacagcg taaactccgc tgtcaatcat gagcaaaatt
     7741 tactctgtgg cgagataaaa ctccggcctt accgggttat ccccaaagca acggcttttt
     7801 taacatttgt caagatgagt gatgacagtt ttatggcaag agatgcctgt tcagtgactg
     7861 ccattgcatt tatctaacca gttaaaaaat aaaagatatt tctttgagcc gtctttaacg
     7921 ccaattcgcg tgcaagccgc gtattctctc gcttgcctcg tgttttctaa ctctaataca
     7981 catggttatc cacaggaata gtggataact gtctccagcc cctatccccc gccgcctggg
     8041 caattcccac attcgccgca tgaggcggaa gtaaaatttt tttcgtgatt attttagaat
     8101 ttaattggtt aaattgcagt caatcgaaga cgcgatctcg ctcgcaattt aaccaaatac
     8161 agaatggcta caacaaggca aggtttatgt actttccggt tgccgcattt tctggatttt
     8221 ctgcaagcca ggggatctct cccagcagcg gcgcgggaat catgcgggtg agcgtggtca
     8281 tatattcagc gtgacgtttt cccggaggcg taacatcgtt cgccacccaa cccgccagag
     8341 tcagtccggc gtgttgtatt gcctgcgcag tcaacatcgc gtgattaata cagccgagtt
     8401 tcacaccaac taccagtatc accggcagtt gttcctgtgt tacccaatct gcaaaagtga
     8461 aagtgtcaga aagcggcgta aaccagccgc cagcaccttc cactaacacc cagtcagcct
     8521 gttgttcaag cgcgcgtaat ccggcgctca ttaccaatga ttctatcggc ctgccctctt
     8581 gcgcgctgat gatgtgcggc gaagtgggtt ctgcgaaggt gtaaggattt actgttgcgt
     8641 aatccagctg caggctgctg ttgtgctgta acgccagcgc gtcactatta cgtaagcctt
     8701 ccggggtctt ttcgctgcca gaggcgaccg gtttataacc tgccgtccga taacctactg
     8761 ccttcgcggc ttgtaaaagt gcacaactgg cgacggtttt ccccacttcg gtatccgttc
     8821 cggtgacaaa ataacgttta ctcacgagca atcactccca aaaaaagatg atacgtcaga
     8881 ggatatcgcc cctgttgttg cggccaggcc agttgcaatc gctgcaattg cgaacgcgtt
     8941 aatattcgcg ggtcgcgccc ttcatgaaga tgcgtagcac cgatgccttt cagcgaacgc
     9001 atggcactga gcgcatcatc aaaccatagt gtgatgggct gaatatgatg ttgataatgc
     9061 acgccgttca gcgactgttc gatttcatct ggcggtaaaa agcgattagc atgcggacgc
     9121 tcgtccaccg cctgccacgc ctgatgcagt tcgggtaacg atccctgcac cagcgtggta
     9181 aacgccacca cgcctccggg gcgcaccacc cgatacagct cgcggagtgc cgtggataaa
     9241 ttaccgcacc actgcaccgc gagattgctc catgcaagat cgaacgtcgc agtcgctaac
     9301 ggcagggatt cgatatctcc cgccagataa tggtctgcag catctttctg gcgggcttgc
     9361 acaagcattg gcggtgagag atctaacgcc gtcacctgtg cgtgacgctc tcgccagtgg
     9421 cggctcatcc agcctggccc acaccccgcg tccagtacgt gggtgtattt acgctgtggg
     9481 agcattgcca gtaagacgtc agcactccgg cgctgtaact ctgcgtgttg ctcatagtgc
     9541 gcggctgccc gaccaaatgc cgctgcaatg gcttgtttat taaccgttgc catgcagcac
     9601 ctccagcaga cggtcgatat cctgcatttc atgcgctgcg gttagcgtta agcgcagtcg
     9661 cgcagtacca gcgggtacgg ttggcgggcg aatcgccgtg acccagcagc cttgctggcg
     9721 cagtttttct gccagttgta acgcacggct gttatcaccg acgatcaatg gctggatggc
     9781 gctgcatgaa tcagcaagcg taaacggcaa atcctgtact ccggcacgaa aacgcgcaat
     9841 gagtgacacc agtttttcgc gccgtgcatc cccctcatca cggcgaatga ccgccagcga
     9901 cgcacgtaat gcctgcgcct gagcgggcgg catactggtg ttgtagataa ggtggcgggc
     9961 gaattgcagc agataatccg ccaccgtact ggagcaaagc accgctgccc cgctgacgcc
    10021 aaatcctttg ccaaaagtca ccaccagcaa ttctggtttt accttttgca gccagcagct
    10081 gccgcgcccc tgctccccga taacgcccgt gccgtgggca tcatcgacca tcaaccagcc
    10141 attgtgctgt tgcgttacct gctggatttc cgccagtggc gcactatcgc cgtccatgct
    10201 gaacacgcct tctgtcacca ccagttgctg ccccggacag ggggaagcaa gcagtcgcgc
    10261 cagatgagtg acatcgttat gaacaaaacg gcgaagctgc gacgggctta aactggcagc
    10321 ctccagcaat gaggcatggc taagccggtc agcgacaatg cggtcctctt ttgccatcat
    10381 cgcggcaatg accgcctgat tagcggcaaa accagagata aatagcagtg cccgcgaata
    10441 gcccagccac tcggccagtt cttcttccag cgcctgatgc gcaacgctat aaccgctgac
    10501 gtgaccggaa ccgccgctac cgacgccaaa ttgctccgca ccctgctgcc aggcacggat
    10561 aatttgcgga tgatggctta aacctaaata atcgttactg gaaaagttca gatactggcg
    10621 atcatccgcc accagccagc gtccggctcc ttgcgccact ggataacggc gacgcagggc
    10681 atcggcagca cgccgcgcat cgagcgccgc gttgattttc tcctgccagc tcatagtgct
    10741 gccgcgttgt aatattcgtc agtatccggg gtcatcagcg cctgttcaag acgttgctgt
    10801 tgttcgttat cccctgccag cacggcagtt tgctgcggat ttagccccag tttgcggaac
    10861 agttgcaggt ctttatcttc ttccggattc ggcgtggtca gcagtttgca accgtagaaa
    10921 atcgagtttg cgcctgccat aaagcacatc gcctgagtct gttcgttcat ctgctcgcgt
    10981 ccggcagaaa ggcgcacgta agaggtcggc atcatgatcc gcgcgaccgc aatggtgcga
    11041 ataaaatcaa aggcatcaac gtcatcgtta tcggcaagcg gcgtgccttt caccttcacc
    11101 agcatgttga ttggcacgct ttccggcggc gtcggcaggt ttgccagttg cagcaataat
    11161 ccggcgcgat cttttaccgt ttcgcctaag cccacaatgc cgccagaaca gactttgatc
    11221 ccggcatcgc gcactttttc cagcgtatcg aggcgttcct gataagtgcg ggtggtgatg
    11281 atattgccgt aaaactccgg cgaggtgtcg aggttgtggt tgtagtaatc cagcccggcg
    11341 ttcgcgaggc gctgcgcctg agattcactc aacgtgccca gcgtcataca cgcctccagc
    11401 cctaaatctt ttaccccctg caccatctgc tccaggtacg gcatatcgcg ttcgttggga
    11461 ttcttccacg ccgcgcccat gcaaaaacgc gtcgatcccg ccgctttcgc tttgcgcgcc
    11521 gactccagca cctgttcaac ttccatcaac cgctcggctt ccagaccggt tttatagcgc
    11581 gagctttgcg ggcaatattt gcaatcttcc gggcaagcac cggttttaat cgacagcaac
    11641 gtgctgacct gcacctgacg aggatcgaaa tgctggcgat gcacctgctg cgcttcaaac
    11701 agcagatcca gcaacggttt ttcaaataat tctgcgactt gcgacaatgt ccagcgtggg
    11761 cggtgagcca tggggcttct ccaaaacgtg ttttttgttg ttaattcggt gtagacttgt
    11821 aaacctaaat cttttcaatt tggtttacaa gtcgattatg acaaaggacg atcttgcctt
    11881 tgaccaacgc catatctggc acccatacac atccatgacc tccccgctgc cggtttatcc
    11941 ggtggtgagc gccgaaggtt gcgagctgat tttgtctgac ggcagacgcc tgattgacgg
    12001 tatgtcgtcc tggtgggcgg cgatccacgg ctacaatcac ccgcagctta atgcggcgat
    12061 gaagtcgcaa attgatgcca tgtcgcatgt gatgtttggc ggtatcaccc atgcgccagc
    12121 cattgagctg tgccgcaaac tggtggcgat gacgccgcaa ccactggaat gcgtttttct
    12181 cgcggactcc ggttccgtag cggtggaagt ggcgatgaaa atggcgttgc agtactggca
    12241 agccaaaggc gaagtgcgcc agcgttttct gaccttccgc aatggttatc atggcgatac
    12301 ctttggcgcg atgtcggtgt gcgatccgga caactcaatg cacaacctgt ggaaaggcta
    12361 tctgccagaa aacctgtttg ctcccgcccc gcaaagccgc atggatggtg aatgggatga
    12421 acgcgatatg gttggctttg cccgcctgat ggcggcgcat cgtcatgaaa tcgcggcggt
    12481 gatcattgaa ccgattgtcc agggcgcagg cgggatgcgc atgtaccatc cggaatggtt
    12541 aaaacgaatc cgcaaaatgt gcgatcgcga aggtatcttg ctgattgccg acgagatcgc
    12601 caccggattt ggtcgtaccg gcaaactgtt tgcctgtgaa tatgcagaaa tcgcgccgga
    12661 cattttgtgc ctcggtaaag ccttaaccgg cggcacaatg accctttccg ccacactcac
    12721 cacgcgcgag gttgcagaaa ccatcagtaa cggcgaagcc ggctgcttta tgcacgggcc
    12781 aacttttatg ggcaatccgc tggcctgcgc ggctgcaaac gccagcctgg cgattctcga
    12841 atctggcgac tggcagcaac aggtggcggc tattgaagta cagctgcgcg agcaacttgc
    12901 ccccgcccgt gatgccgaaa tggttgccga tgtgcgcgtg ctgggggcaa tcggcgtagt
    12961 cgaaacaact cgtccggtga atatggcggc gctgcaaaaa ttctttgtcg aacagggggt
    13021 atggatccgg ccttttggca aactgattta cctgatgccg ccctatatta ttctcccgca
    13081 acagttgcag cgtctgaccg cagcggttaa ccgtgcggtg caggatgaaa catttttttg
    13141 ccaataacgg gaagtcagcg tgtgggtttc tggctacact ttctgcaaac tagaaaggag
    13201 ggttcatgaa actcatcagt aatgatctgc gcgatggcga taagctgccg catcgtcatg
    13261 tctttaacgg catgggttac gatggcgata atatttcacc gcatctggcg tgggatgatg
    13321 ttcctgcggg aacgaaaagt tttgttgtca cctgctacga cccggatgcg ccaaccggct
    13381 ccggctggtg gcactgggta gttgttaatt tacccgctga tacccgcgta ttaccgcaag
    13441 ggtttggctc tggtctggta gcaatgccag acggcgtttt gcagacgcgt accgattttg
    13501 gtaaaaccgg atacgatggc gcagcgccgc cgaaaggcga aacccatcgc tacattttta
    13561 ccgttcacgc gctggatgta gagcatattg atgtcgatga aggagccagc ggcgcgatgg
    13621 tcgggtttaa cgttcatttc cactctctgg caagcgcatc gattaccgcg atgtttagtt
    13681 aatcactctg ccagatggcg caatgctatc tggtatcact taaaggtatt aaaaacaact
    13741 ttttgtcttt ttaccttccc gtttcgctca agttagtata aaaaagcagg cttcaacgga
    13801 ttcatttttc tatttcatag cccggagcaa cctgtgaaca cattttcagt ttcccgtctg
    13861 gcgctggcat tggcttttag cgtgacgctg accgcctgta gctcaacacc acccgatcaa
    13921 cgtccttctg atcaaactgc gcctggtacc tcttctcgcc cgattctgtc ggcaaaagaa
    13981 gcgcagaatt tcgatgctca acactatttt gcatccctga caccaggtgc tgcagcgtgg
    14041 aatccttccc cgattaccct gcctgcgcaa cctgactttg ttgtcggccc ggcgggcact
    14101 caaggtgtaa cgcataccac gattcaggcg gcggtagatg cggcaattat caagcgtacc
    14161 aacaagcgcc agtatattgc cgtgatgcct ggtgagtatc agggaacggt gtatgtccct
    14221 gctgctccgg gtggaattac tctgtacggt acaggtgaaa aaccgattga tgtgaagatt
    14281 gggctttccc ttgatggggg catgagccct gccgactggc gtcacgacgt caacccgcgc
    14341 ggcaaatata tgccaggtaa accagcgtgg tatatgtacg atagctgcca gagcaaacgc
    14401 agcgacagta tcggtgttct ctgctctgcg gtcttctggt cacaaaacaa tggcctgcaa
    14461 ctgcaaaacc tgaccatcga aaacacgctg ggcgatagcg tagatgcagg taaccatccg
    14521 gcggtggcac tgcgtactga tggtgaccag gtacagatta acaacgttaa cattctcggt
    14581 cgtcagaaca ccttctttgt caccaacagc ggtgtgcaga accgtctgga aacgaatcgt
    14641 cagccgcgta cgctggtgac caacagctac attgaagggg atgtggatat cgtttctggt
    14701 cgcggcgcag tggtgttcga taacaccgaa ttccgcgtgg tgaactcacg tactcagcaa
    14761 gaagcgtatg tgtttgcacc ggctacgctg tccaacattt actacggttt cctcgccgta
    14821 aacagccgtt tcaatgcttt cggtgatggt gtggcgcaac tgggccgctc gctggatgtt
    14881 gatgccaata ccaacggtca ggtggtgatc cgtgatagcg ccatcaacga aggttttaac
    14941 acggctaaac cgtgggccga tgcggtgatc tctaatcgtc cgtttgcggg taataccggc
    15001 agcgtagatg ataacgacga aatacagcgc aatctgaatg acactaacta caaccgcatg
    15061 tgggaataca ataaccgcgg cgtgggtagt aaagtggttg cagaggcgaa gaagtaagag
    15121 caattaacta tttgccggat gcggcgtaaa cgccttatcc ggcctacggt tcgatgcgat
    15181 ttgtaggtcg gataagatgc gcaagcatcg catccgacaa taagtgccga atgcgaccta
    15241 cattcacatg gcgcttttta catctgacgg tttttattga agttaatcaa actacccgcc
    15301 ttgataatct cgcgctcttc agcagtcaga ctttccatat agagcgtaat ttccgttacc
    15361 ggcgcatctt catggatcac ataaccttta aacgtcgtac ccggattatc cagcgccgct
    15421 ttaatgccag ggatgtaaat gtaatccccc acttcaaagg ttggcacttc cgccatctgc
    15481 agcggtaaca tcccccagtt gatgacgtta gaacggtagc gtttagtcgc gtactcttcg
    15541 gcaatattcg ccagaccgcc aatcacacgc tggcagctcg ccgcctgttc acgcgcagaa
    15601 ccatcgcctg gtttcaccgc atataccatg ctgccaattt cagtttgcag cggatcaata
    15661 tgctcctgac cagcaatctg cttaatgcgc gcaaacacct ctgtcagctc gctgacattc
    15721 cccgccagac gctgattttc cagctcagca gtcgctttac ttctgccaac ataaccggga
    15781 tcgcggcgtg acagggtaaa ctccgccaga ccaatcggat ttgaacgata agaagaggtt
    15841 tcaccggaag gaatcagttc gtcggtggtg gtcacttcgt cgaggatctt cgagcacact
    15901 ttcaggacga tattgtcagt cagcgcaccc aattccggcc agtctttaat gttcggtccg
    15961 taaatcagcg gttgctgagt tgcccctttc acaaagccct gataaacacg gtttttatac
    16021 ggcgttacat cgaaggcgta ctccggcacg ttgtcccagc aatcaagttc gctggcagag
    16081 gttaaatagc caccgtttgc cgcagtcgca gcgatagaac gagcgtccat caacgccacc
    16141 gctgacatct gcccattagc tggcttagag ccttcgcggt tcgggaagtt acgcgtggtg
    16201 tggcgaatac ttaatccgtt gttgattggc gtatcgcccg cgccaaagca tgggccgcag
    16261 aacgcggttc tgatgattgc gcctgcgcca atcaaatctg ctaccacacc ttttttggct
    16321 aaatccataa acaccggctg tgatgacggg taaaccgcca gcgagaaggt gtcattgcca
    16381 caggattgac cgcgcagtgc attcgccgcc gcgatgacgt tttcgtagtt accgccagaa
    16441 cagcccgcga taatcccctg ctgcactttc aggcgaccat tttccacttt atccagcagc
    16501 gagagtttgg ctttaccgtg cgccacgcgt tcggactcaa tttcaatctc acgcagaatg
    16561 tcggtcaggt tctggttcag tgtgtcgatt tcatacacgt tgctcgggtg gaacggcagc
    16621 gcaatcattg gtttgatggc gcttaaatca acgctgatgc agccatcgta gtacgccatc
    16681 ggttgagggt taagctggca gtaatcctgg ccgcgaccgt gcagcgccag ccagttatgc
    16741 acttcttcat cagtttgcca gacggagctt aaacaggtgg tttccgtggt catcacgtca
    16801 acgctgttac ggaaatcggt agagagcgcg ctaacgcccg gtccaacgaa ctccatgact
    16861 ttgtttttga cgtaaccgtt tttgaacacc gcgccaatga tagccagcgc cacatcctgt
    16921 ggccccacat acggcgcagg ttttccggtc agatgcaccg caaccacgcc cggatagtcg
    16981 atatcccagg tgtcattaag cagctgtttt accaactcac cgccgccctc accgactgcc
    17041 attgtcccta atgcaccgta acgggtgtgg ctgtctgacc cgaggatcat tttgcccccg
    17101 cctgccatca tctcacgcat atattgatgg atgatcgcaa tatgcggagg cacaaaaata
    17161 ccgccataac gctgagctgc cgataaacca aaaacatggt catcaccgtt aatggtgccg
    17221 ccgacggcgc agagtgagtt atggcagttg gtcagcacat acggcagcgg gaaacgttcc
    17281 attccggacg ctttagcggt ctgtacaata ccaacaaagg taatatcgtg agaggctaat
    17341 gaatcaaact taattttaag tttatccata tttccggacg tattatgaga agagagaata
    17401 gaccaggcaa tagtgccttt tttggcttct tcttttttaa tttcgccggt gaaatgttct
    17461 tcggcaatta tttcgttatt actggcgaga aacacgcctt
//
LOCUS       DADMJE010000081        17495 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.082, whole genome shotgun sequence.
ACCESSION   DADMJE010000081 DADMJE010000000
VERSION     DADMJE010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17495)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17495)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17495
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.082"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..642)
                     /locus_tag="JN001_002425"
     CDS             complement(<1..642)
                     /locus_tag="JN001_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HAY9053627.1"
                     /translation="MSLNFTVIVWLRLSIGGVYELAFCRSSLKSKKYFIILLALAAIA
                     GLGTHAAWSSNGLPRIDNKTLARLAQQHPVVVLFRHAERCDRSTNQCLSDKTGITVKG
                     TQDARELGNAFSADIPDFDLYSSNTVRTIQSATWFSAGKKLTVDKRLLQCGNEIYSAI
                     KDLQSKAPDKNIVIFTHNHCLTYIAKNKRDATFKPDYLDGLVMHVEKGKVYLDG"
     gene            893..2032
                     /gene="arnB"
                     /locus_tag="JN001_002426"
     CDS             893..2032
                     /gene="arnB"
                     /locus_tag="JN001_002426"
                     /EC_number="2.6.1.87"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_024188371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-4-amino-4-deoxy-L-arabinose
                     aminotransferase"
                     /protein_id="HAY9053628.1"
                     /translation="MSEFLPFSRPAMGVEELAAVKEVLESGWITTGPKNQALEQAFCQ
                     LTGNQHAIAVSSATAGMHITLMALEIGKGDEVITPSLTWVSTLNMISLLGATPVMVDV
                     DRDTLMVTPEAIESAITPRTKAIIPVHYAGAPADIDAIRAIGERYGIAVIEDAAHAVG
                     TYYKGRHIGAKGTAIFSFHAIKNITCAEGGLIVTDNENLARQLRMLKFHGLGVDAYDR
                     QTWGRAPQAEVLTPGYKYNLTDINAAIALTQLAKLEHLNTRRREIAQQYQQALAALPF
                     QPLSLPAWPHVHAWHLFIIRVDEQRCGISRDALMEALKERGIGTGLHFRAAHTQKYYR
                     ERFPTLSLPNTEWNSERICSLPLFPDMTTADADRVITALQQLAGQ"
     gene            2036..3004
                     /gene="arnC"
                     /locus_tag="JN001_002427"
     CDS             2036..3004
                     /gene="arnC"
                     /locus_tag="JN001_002427"
                     /EC_number="2.4.2.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-phosphate
                     4-deoxy-4-formamido-L-arabinose transferase"
                     /protein_id="HAY9053629.1"
                     /translation="MFEIHPVKKVSVVIPVYNEQESLPELIRRTTTACESLGKEYEIL
                     LIDDGSSDNSAHMLVEASQAENSHIVSILLNRNYGQHSAIMAGFSHVTGDLIITLDAD
                     LQNPPEEIPRLVAKADEGYDVVGTVRQNRQDSWFRKTASKMINRLIQRTTGKAMGDYG
                     CMLRAYRRHIVDAMLHCHERSTFIPILANIFARRAIEIPVHHAEREFGESKYSFMRLI
                     NLMYDLVTCLTTTPLRMLSLLGSIIAIGGFSIAVLLVILRLTFGPQWAAEGVFMLFAV
                     LFTFIGAQFIGMGLLGEYIGRIYTDVRARPRYFVQQVIRPSSKENE"
     gene            3004..4986
                     /gene="arnA"
                     /locus_tag="JN001_002428"
     CDS             3004..4986
                     /gene="arnA"
                     /locus_tag="JN001_002428"
                     /EC_number="1.1.1.305"
                     /EC_number="2.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-4-amino-4-deoxy-L-arabinose
                     formyltransferase/UDP-glucuronic acid oxidase ArnA"
                     /protein_id="HAY9053630.1"
                     /translation="MKTVVFAYHDMGCLGIEALLAAGYEISAIFTHTDNPGEKAFYGS
                     VAHLAAERGIPVYAPDNVNHPLWVERIAQLSPEVIFSFYYRHLICDEILQLAPAGAFN
                     LHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQLRVAIAPDDIAIT
                     LHHKLCHATRQLLEQTLPAIKHGNILEIAQRENEATCFGRRTPDDSFLEWHKPASVLH
                     NMVRAVADPWPGAFSYVGNQKFTVWSSRVHPHASKAQPGSVISIAPLLIACGDGALEI
                     VTGQAGDGITMQGSQLAQTLGLVQGSRLNSQPACTARRRTRVLILGVNGFIGNHLTER
                     LLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI
                     ATPIEYTRNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSN
                     LIVGPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGS
                     SRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIG
                     NPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPSIR
                     NAHRCLDWEPKIDMQETIDETLDFFLRTVDLTDKPS"
     gene            4983..5873
                     /locus_tag="JN001_002429"
     CDS             4983..5873
                     /locus_tag="JN001_002429"
                     /EC_number="3.5.1.n3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-deoxy-4-formamido-L-arabinose-
                     phosphoundecaprenol deformylase"
                     /protein_id="HAY9053631.1"
                     /translation="MTKVGLRIDVDTFRGTREGVPRLLEILSKHNIQASIFFSVGPDN
                     MGRHLWRLVKPQFLWKMLRSNAASLYGWDILLAGTAWPGKEIGHANADIIREAAKHHE
                     VGLHAWDHHAWQARSGNWDRQTMIDDIARGLRTLEEIIGQPVTCSAAAGWRADQKVIE
                     AKEAFHLRYNSDCRGAMPFRPLLESGNPGTAQIPVTLPTWDEVIGRDVKTEDFNGWLL
                     NRILRDKGTPVYTIHAEVEGCAYQHNFVDLLKRAAQEGVTFCPLSELLSETLPLGQVV
                     RGNIAGREGWLGCQQIAGSR"
     gene            5873..7525
                     /gene="arnT"
                     /locus_tag="JN001_002430"
     CDS             5873..7525
                     /gene="arnT"
                     /locus_tag="JN001_002430"
                     /EC_number="2.4.2.43"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid IV(A)
                     4-amino-4-deoxy-L-arabinosyltransferase"
                     /protein_id="HAY9053632.1"
                     /translation="MKSVRYLIGLFAFIACYYLLPISTRLLWQPDETRYAEISREMLA
                     SGDWIVPHLLGLRYFEKPIAGYWINSIGQWLFGANNFGVRAGVIFATLLTAALVTWFT
                     LRLWRDKRLALLATVIYLSLFIVYAIGTYAVLDPFIAFWLVAGMCSFWLAMQAQTWKG
                     KSAGFLLLGITCGMGVMTKGFLALAVPVLSVLPWVATQKRWKDLFIYGWLAVISCVLT
                     VLPWGLAIAQREPDFWHYFFWVEHIQRFALDDAQHRAPFWYYVPVIIAGSLPWLGLLP
                     GALYTGWKNRKHSATVYLLSWTIMPLLFFSVAKGKLPTYILSCFASLAMLMAHYALLA
                     AKNNPLALRINGWINIAFGVTGIIATFVVSPWGPMNTPVWQTFESYKVFCAWSIFSLW
                     AFFGWYTLTNVEKTWSFAALCPLGLALLVGFSIPDRVMEGKHPQFFVEMTQESLQPSR
                     YILTDSVGVAAGLAWSLQRDDIIMYRQTGELKYGLNYPDAKGRFVSGDEFANWLNQHR
                     QEGIITLVLSVDRDEDINSLAIPPADAIDRQERLVLIQYRPK"
     gene            7522..7857
                     /gene="arnE"
                     /locus_tag="JN001_002431"
     CDS             7522..7857
                     /gene="arnE"
                     /locus_tag="JN001_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnE"
                     /protein_id="HAY9053633.1"
                     /translation="MIWLTLVFASLLSVAGQLCQKQATCFVAINKRRKHIVLWLGLAL
                     ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIG
                     GIVILGSTV"
     gene            7857..8243
                     /gene="arnF"
                     /locus_tag="JN001_002432"
     CDS             7857..8243
                     /gene="arnF"
                     /locus_tag="JN001_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311173.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-amino-4-deoxy-L-arabinose-phosphoundecaprenol
                     flippase subunit ArnF"
                     /protein_id="HAY9053634.1"
                     /translation="MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFG
                     LDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFS
                     LKALLGVACIMSGLMLIFLPTTKQRY"
     gene            complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JN001_002433"
     CDS             complement(8237..8503)
                     /gene="pmrD"
                     /locus_tag="JN001_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416762.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction protein PmrD"
                     /protein_id="HAY9053635.1"
                     /translation="MEWLVKKSCCNKQDNRHVLMLCDAGGAIKMIAEVKSDFAVKVGD
                     LLSPLQNALYCINREKLHTVKVLSASSYSPDEWERQCTAAGKTQ"
     gene            complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JN001_002434"
     CDS             complement(8613..9968)
                     /gene="menE"
                     /locus_tag="JN001_002434"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HAY9053636.1"
                     /translation="MIFSDWPWRHWRQVRGEAIALRLNDEQLNWRELCARVDELATGF
                     AAQGVVEGSGVMLRAWNTPQTLLAWLALLQCGARVLPVNPQLPQPLLEELLPNLTLQY
                     ALVLEGENTFPALTSLHIQMVEGTHSALWQPTRLCSMTLTSGSTGLPKAAVHTYQAHL
                     ASAQGVLSLIPFGDHDDWLLSLPLFHVSGQGIMWRWLYAGARMTVRDKQPLEQMLAGC
                     THASLVPTQLWRLLVNRSSVSLKAVLLGGAAIPVELTEQAREQGIRCFCGYGLTEFAS
                     TVCAKEADGLADVGSPLPGREVKIVNNEVWLRAASMAEGYWRNGQLVSLVNDEGWYAT
                     RDRGEMHNGKLTIVGRLDNLLFSGGEGIQPEEVERVIAAHPAVLQVFIVPVADKEFGH
                     RPVAVVEYDQQTVDLGEWVKDKLARFQQPVRWLTLPPELKNGGIKISRQALKEWVQRQ
                     Q"
     gene            complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JN001_002435"
     CDS             complement(9965..10927)
                     /gene="menC"
                     /locus_tag="JN001_002435"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HAY9053637.1"
                     /translation="MRSAQVYRWQIPMDAGVVLRDRRLKTRDGLYVCLREGEREGWGE
                     ISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELLQMPSIAFGVSCALAELADTLPQAA
                     NYRAAPLCNGDPDDLILKLADMPGEKVAKVKVGLYEAVRDGMVVNLLLEAIPDLHLRL
                     DANRAWTPLKGQQFAKYVNPDYRHRIAFLEEPCKTRDDSRAFARETGIAIAWDESLRE
                     PDFAFVAEEGVRAVVIKPTLTGSLEKVREQVQAAHALRLTAVISSSIESSLGLTQLAR
                     IAAWLTPDTIPGLDTLDLMQAQQVRRWPGSTLPVVEVDALERLL"
     gene            complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JN001_002436"
     CDS             complement(10927..11784)
                     /gene="menB"
                     /locus_tag="JN001_002436"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001641973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HAY9053638.1"
                     /translation="MIYPDEAMLYAPVEWHDCSEGFEDIRYEKSTDGIAKITINRPQV
                     RNAFRPLTVKEMIQALADARYDDNVGVIILTGAGDKAFCSGGDQKVRGDYGGYKDDSG
                     VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVG
                     SFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWC
                     REMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQP
                     DFSKFKRNP"
     gene            complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JN001_002437"
     CDS             complement(11799..12557)
                     /gene="menH"
                     /locus_tag="JN001_002437"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HAY9053639.1"
                     /translation="MILHAQAKHGKPGLPWLVFLHGFSGDCHEWQEVGEAFADYSRLY
                     VDLPGHGGSAAISVDGFDDVTDLLRKTLVSYNILDFWLVGYSLGGRVAMMAACQGLAG
                     LCGVIVEGGHPGLQNAEQRAERQRSDRQWAQRFRTEPLTAVFADWYQQPVFASLNDDQ
                     RRELVALRSNNNGATLAAMLEATSLAVQPDLRANLSARTFAFYYLCGERDSKFRALAA
                     ELAADCHVIPRAGHNAHRENPAGVIASLAQILRF"
     gene            complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JN001_002438"
     CDS             complement(12554..14224)
                     /gene="menD"
                     /locus_tag="JN001_002438"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HAY9053640.1"
                     /translation="MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAEN
                     SAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLIL
                     LTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLH
                     AGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPSLESEKQRDWFFWR
                     QKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSEL
                     QQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWL
                     ELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRISDYLPEQGQLFVGNSL
                     VVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLN
                     ALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKY
                     HRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL"
     gene            complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JN001_002439"
     CDS             complement(14313..15608)
                     /gene="menF"
                     /locus_tag="JN001_002439"
                     /EC_number="5.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416768.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HAY9053641.1"
                     /translation="MQSLTTALENLLRHLSQEIPATPGIRVIDIPFPLKDAFDALSWL
                     ASQQTYPQFYWQQRNGDEEAAVLGAITRFTSLDQAQRFLRQHPEHADLRIWGLNAFDP
                     SQGNLLLPRLEWRRCGGKATLRLTLFSESSLQHDAIQAKEFIATLVSIKPLPGLHLTT
                     TREQHWPDKTGWTQLIELATKTIAEGELDKVVLARATDLHFASPVNAAAMMAASRRLN
                     LNCYHFYMAFDGENAFLGSSPERLWRRRDKALRTEALAGTVANHPDDKQAQQLEEWLM
                     ADDKNQRENMLVVEDICQRLQADTQTLDVLPPQVLRLRKVQHLRRCIWTSLNKADDVI
                     CLHQLQPTAAVAGLPRDLARQFIARHEPFTREWYAGSAGYLSLQQSEFCVSLRSAKIS
                     GNVVRLYAGAGIVRGSDPEQEWQEIDNKAAGLRTLLQME"
     gene            complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JN001_002440"
     CDS             complement(15687..15992)
                     /gene="elaB"
                     /locus_tag="JN001_002440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response protein ElaB"
                     /protein_id="HAY9053642.1"
                     /translation="MSNQFGDTRIDDDLTLLSETLEEVLRSSGDPADQKYVELKARAE
                     KALDDVKKRVSQVSDSYYYRAKQAVYRADDYVHEKPWQGIGVGAAVGLVLGLLLARR"
     gene            complement(16047..16508)
                     /locus_tag="JN001_002441"
     CDS             complement(16047..16508)
                     /locus_tag="JN001_002441"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY9053643.1"
                     /translation="MIEWQDLHHSELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDL
                     TGDNRHILGWKNDELVAYARILKSDDDLEPVVIGRVIVSEALRGEKVGQQLMSKTLDT
                     CTHHWPDKPVYLGAQAHLQNFYQSFGFIPVTEVYEEDGIPHIGMAREVIQA"
     gene            16573..17490
                     /gene="rbn"
                     /locus_tag="JN001_002442"
     CDS             16573..17490
                     /gene="rbn"
                     /locus_tag="JN001_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease BN"
                     /protein_id="HAY9053644.1"
                     /translation="MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQ
                     HQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIYGPQGIREFVE
                     TALRISGSWTDYPLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEEHDKPGALN
                     AQALKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDA
                     ALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREAGVGKLIITHVSSRYD
                     DKGCQHLLRECRSIFPATELANDFTVFNV"
BASE COUNT         4115 a         4696 c         4437 g         4247 t
ORIGIN      
        1 cccatccaga taaactttgc ctttttccac atgcatgact aaaccatcca gataatcagg
       61 tttaaatgtc gcatcacgct tatttttagc aatatatgtc aggcaatgat tatgggtgaa
      121 aataacgata tttttatcag gcgctttgct ttgtaagtcc ttaattgcac tataaatctc
      181 attaccgcac tgaagaagtc gtttatctac cgtcagcttt ttacccgcgg aaaaccaggt
      241 cgccgactga atggtccgga cggtattact ggaataaaga tcgaaatcag ggatgtcagc
      301 gctaaaagcg ttgcccagtt cacgggcatc ctgggtacct ttaaccgtaa tacctgtttt
      361 atctgacaag cattgattgg ttgaacgatc gcaacgttca gcatggcgaa acaaaacgac
      421 aaccgggtgc tgctgtgcca gtctggccaa tgttttattg tcgatacgtg gcaaaccatt
      481 gctactccag gcggcatgag tacccagtcc ggcaattgca gcgagcgcca gtaaaatgat
      541 gaaatatttt tttgacttca atgatgagcg gcaaaaagct aactcgtaaa ctccacctat
      601 agacaagcgc aaccagacaa ttaccgtgaa attgagcgac atttctggcg ataattagca
      661 gttggtgtaa tattaaaaat cctacgatgt cggcaaaatg cctcaaaatt ttgccaaatg
      721 caaagcctaa ataagaaaaa atataaaaat ttcaatattt acgtctaata ttagtttctt
      781 aaggttaagt taatattcta tccttaaaat ttcgttccaa atggcaaaat atacacaaca
      841 ctctttatag caaatataag tggacaggta ttcaatggcg gaaggaaaag caatgtcaga
      901 atttttgcct ttttcgcgac cagcaatggg cgtggaggaa ctcgctgcag ttaaagaagt
      961 tctcgaatcc ggttggatca caaccggtcc gaagaatcag gcgcttgagc aagccttttg
     1021 ccagttgacg ggaaatcagc atgccatcgc ggtcagttca gccaccgccg gaatgcatat
     1081 cacgctaatg gcgttggaaa ttggcaaggg cgatgaagtg attacgcctt ccctgacctg
     1141 ggtttcaacc ctcaatatga tttccttgtt gggtgcaacg ccggtaatgg tggatgtcga
     1201 ccgcgatacg ctgatggtca cgcctgaagc gatcgagtca gccattacgc cacgcactaa
     1261 agccatcatt ccggtgcatt atgccggtgc gccagcagat attgacgcca ttcgcgccat
     1321 tggcgaacgt tacggcatcg cagttatcga agatgctgcc catgccgtcg gtacgtatta
     1381 caaagggcga catattggcg caaaaggtac cgctattttt tcatttcatg ccattaaaaa
     1441 tattacctgt gcggaaggtg gcctgattgt aactgataat gaaaaccttg cccgccagct
     1501 acggatgctg aaatttcacg gcctgggtgt cgatgcctat gacagacaaa cctggggccg
     1561 agcaccgcag gctgaagtct taacaccggg ctataagtac aatctgaccg atattaacgc
     1621 cgcaattgcc ctgacacagt tagcaaaatt agagcacctc aacacccgtc ggcgcgaaat
     1681 tgcccagcaa tatcagcaag cactggctgc tctccccttt cagccattaa gccttcccgc
     1741 ctggccgcac gttcacgcct ggcatctgtt tattattcgt gtcgatgaac aacgttgtgg
     1801 tatcagtcgc gatgcgttga tggaagcgtt aaaagaaaga ggcattggta ccgggttaca
     1861 tttccgcgcc gctcacacac aaaaatatta tcgcgagcgt tttcccacgc tgtcgttacc
     1921 gaataccgaa tggaatagcg aacgcatctg ttctttgccg ctgttcccgg atatgactac
     1981 cgccgatgcc gaccgtgtca tcacagccct tcagcaactc gcaggacaat aagccatgtt
     2041 tgaaatccac cctgttaaga aagtctcggt ggttattccc gtttataacg agcaggaaag
     2101 cttaccggaa ttaatcaggc gcaccaccac agcctgtgaa tcgttgggga aagagtatga
     2161 gatcctgctg attgatgacg gcagtagcga taattccgcg catatgctgg tcgaagcctc
     2221 acaagcggag aacagccata ttgtgtctat tttgcttaac cgcaattacg ggcaacattc
     2281 agcgattatg gcgggattca gtcacgttac tggcgactta attattaccc ttgatgccga
     2341 tctccagaat ccgccagaag aaatcccccg cctagtggca aaagccgatg aaggttacga
     2401 cgtggtaggg actgtacgcc agaaccgcca ggacagctgg tttcgtaaaa cagcttcgaa
     2461 gatgattaac cggcttattc agcgcaccac cggcaaagcg atgggtgact acggttgtat
     2521 gctgcgcgcc tatcgccgtc atattgtcga tgcgatgttg cactgccatg aacgtagcac
     2581 ctttatcccg attctggcga atatcttcgc ccgccgtgcc attgaaattc cagtacatca
     2641 tgccgagcgt gagtttggtg aatccaaata cagttttatg cgcctgatta atttgatgta
     2701 cgacctggtg acctgcctta ccacaacgcc gctacgtatg ctgagtctgc tcggcagcat
     2761 tattgcgatt ggaggtttta gcattgcggt gctgctggtg attttacgcc tgaccttcgg
     2821 accacaatgg gcggcagaag gcgtctttat gctatttgcc gtgctgttta cttttattgg
     2881 cgctcagttt atcggcatgg gattactcgg tgaatatatc ggcaggatct acaccgatgt
     2941 ccgcgcccgc ccccgctatt ttgttcagca agttatccgt ccatccagca aggaaaatga
     3001 ataatgaaaa ccgtcgtttt tgcctaccac gatatgggat gcctcggtat tgaagctctg
     3061 ctggctgccg gttacgaaat tagcgccatt tttacccata ccgataatcc cggtgaaaaa
     3121 gccttttatg gttcggtggc tcatctggcg gcggaaagag gcattccggt ttatgcgccg
     3181 gataacgtta atcatccgct gtgggtggaa cgcattgccc aactgtcacc agaggtgatt
     3241 ttctcttttt attatcgcca tcttatttgc gacgagattt tgcagctcgc tcccgcaggt
     3301 gcatttaatc tgcacggttc gctgttacca aaatatcgtg gtcgcgcgcc gctgaactgg
     3361 gtgctggtga acggtgaaac ggaaacgggc gttacattgc accgaatggt aaaacgtgcc
     3421 gatgctgggg ccattgtggc gcaactgcgc gttgccattg cgccagacga tatcgctatt
     3481 acgctgcatc ataaattgtg ccatgccacg cgccagctac tggaacagac attacccgcc
     3541 attaaacacg gtaatattct ggaaatcgcc cagcgcgaaa acgaagccac ctgttttggt
     3601 cgcagaacgc cggatgacag tttccttgaa tggcataaac cggcatccgt actgcacaac
     3661 atggtacgtg ccgttgccga tccgtggccg ggtgccttca gctatgttgg caatcagaaa
     3721 ttcaccgtct ggtcgtcgcg tgttcatcct catgccagca aagcacagcc ggggagcgtg
     3781 atttctattg caccgctgtt gattgcctgt ggcgatggcg cgctggaaat cgtcaccgga
     3841 caggcgggcg acggcattac tatgcagggc tcgcaattag cgcagacgct gggcctggtg
     3901 caaggttcac gcttgaatag ccagcctgcc tgcaccgccc gacgccgtac ccgggtactc
     3961 atcctcgggg tgaatggctt tattggcaac catctgacag aacgcctgct gcgcgaagat
     4021 cattatgaag tttacggtct ggatattggc agcgatgcga taagccgttt tctgaatcat
     4081 ccgcattttc actttgttga aggcgatatc agtattcatt ccgaatggat tgagtatcat
     4141 gtcaaaaaat gtgatgtcgt cttgccgctg gtggcgatag ccacgccgat tgaatatacc
     4201 cgcaacccgc tgcgcgtatt tgaactcgat tttgaagaga atctgcgcat tatccgctac
     4261 tgcgtgaagt accgtaagcg aatcatcttc ccgtcaactt cagaagttta tgggatgtgt
     4321 agcgataaat acttcgatga ggaccattct aatttaatcg tcggcccggt gaataaacca
     4381 cgctggattt attcggtatc aaaacaatta cttgatcggg tgatctgggc ctatggcgaa
     4441 aaagagggtt tacagttcac cctcttccgc ccgtttaact ggatgggacc acgactggat
     4501 aaccttaatg cggcacgaat cggcagctcc cgcgctatta cgcaactcat tctcaatctg
     4561 gtagaaggtt caccgattaa gctgattgat ggcggaaaac aaaaacgctg ctttactgat
     4621 attcgcgatg gtatcgaggc gttataccgc attatcgaaa atgcgggaaa tcgctgcgac
     4681 ggtgaaatta tcaacattgg caatcctgag aacgaagcaa gcattgagga actgggcgag
     4741 atgctgctgg cgagcttcga aaaacatccg ctgcgccatc atttcccacc gtttgcgggc
     4801 tttcgcgttg tcgaaagtag cagctactac ggcaaaggat atcaggacgt agagcatcgt
     4861 aaaccgagca tccgcaatgc ccaccgctgc ctggactggg agccgaaaat tgatatgcag
     4921 gaaaccatcg acgaaacgct ggatttcttc ctgcgcaccg ttgatcttac ggataaacca
     4981 tcatgaccaa agtaggctta cgcattgatg tcgatacctt tcgtggcacc cgtgaaggcg
     5041 tgccgcgtct gctggaaatc ttgagtaagc ataatattca ggccagcatt tttttcagcg
     5101 tcggcccgga caatatgggc cgccatctct ggcgactggt gaagccacag tttttgtgga
     5161 agatgctgcg ctcaaacgcg gcatcgcttt atggctggga tattttactg gcaggtacgg
     5221 cctggccagg taaagagatt ggtcatgcca atgccgatat cattcgtgaa gcggctaaac
     5281 atcacgaagt cggcctgcac gcctgggatc accatgcctg gcaagcccgt agcggtaact
     5341 gggatcggca aacaatgatc gacgatattg cacgcggtct tcgcactctg gaagagatta
     5401 tcggtcaacc ggtaacctgt tctgccgctg cgggctggcg tgccgaccag aaggtgatcg
     5461 aagcaaaaga agcgttccat ttgcgctaca acagcgattg tcgtggggcc atgccgttcc
     5521 gtccattgct cgaatcagga aaccctggca ctgcgcaaat tccggtgacc ttacccacct
     5581 gggatgaagt gattggtcgg gatgtgaaaa cagaagattt taacggttgg ttactcaacc
     5641 gcatcctgcg agataaaggc acgccggttt ataccattca tgcagaagtt gaaggctgcg
     5701 cttatcagca taattttgtg gatctcctca aacgcgcagc tcaggaaggc gtgacatttt
     5761 gccctttaag cgaactgtta tcagagacgt tgccgctcgg acaagttgtt cgcggaaata
     5821 ttgccggacg tgaaggctgg ctgggttgcc aacaaattgc gggtagtcgc tgatgaaatc
     5881 ggtacgttac cttatcggcc tcttcgcgtt tattgcctgc tattacctgt taccgatcag
     5941 cacgcgtctg ctctggcaac ccgatgaaac gcgttatgcg gaaatcagtc gagaaatgct
     6001 ggcatccggc gactggattg tgccccatct gttagggcta cgttatttcg aaaaacccat
     6061 tgccggatac tggattaaca gcattgggca atggctattt ggcgcgaata actttggtgt
     6121 gcgggcaggc gttatctttg cgaccctgtt aactgccgcg ctggtgacct ggtttactct
     6181 gcgcttatgg cgcgataaac gtctggctct actcgccaca gtaatttatc tctcattgtt
     6241 tattgtctat gccatcggca cttatgccgt gctcgatccg tttattgcat tctggctggt
     6301 ggcgggaatg tgcagcttct ggctggcaat gcaggcacag acgtggaaag gcaaaagcgc
     6361 aggattttta ctgctgggaa tcacctgcgg catgggggtg atgaccaaag gttttctcgc
     6421 ccttgccgtg ccggtattaa gcgtgctgcc atgggtagcg acgcaaaaac gctggaaaga
     6481 tctctttatt tacggctggc tggcggttat cagttgcgta ctgacggttc tcccttgggg
     6541 actggcgata gcgcagcggg agcctgactt ctggcactat tttttctggg ttgagcatat
     6601 tcaacgcttt gcactggatg atgcccaaca tagagctccg ttctggtact acgtgccggt
     6661 catcattgcc ggtagcctgc cgtggctggg attactcccc ggtgcactgt acacaggctg
     6721 gaaaaaccgc aagcattccg caaccgtcta tttgttgagc tggacgataa tgccgctgct
     6781 gtttttctcc gtcgctaaag gtaaattgcc cacctatatt ctttcctgct ttgcatctct
     6841 ggcaatgctg atggcgcatt acgctttgct ggcagcaaaa aataatcctc tggcgctgcg
     6901 gattaatggc tggattaaca tcgcttttgg cgtcactggc attattgcca catttgtggt
     6961 ctccccgtgg ggaccaatga acacgccggt gtggcaaacc ttcgagagct ataaagtctt
     7021 ttgtgcctgg tcgatttttt cgctatgggc atttttcggc tggtacacct taacaaacgt
     7081 cgaaaagacc tggtctttcg ccgcgctttg cccgctgggg ctggcgttgc tggtaggatt
     7141 ttcaattcct gacagagtca tggaaggaaa acatccgcaa ttttttgtcg agatgacaca
     7201 agaatcactt caaccaagcc gctatattct tactgatagc gtcggtgttg ccgcaggtct
     7261 ggcatggagc ctgcaacgcg atgacatcat catgtatcgc cagacaggtg agttgaaata
     7321 cggccttaat tatccggatg cgaaagggag atttgtcagc ggtgatgagt tcgcaaactg
     7381 gcttaatcaa catcgtcagg aggggattat tacactcgtg ctttcggttg accgcgatga
     7441 agatatcaac agtctcgcca ttccgcccgc agatgccatc gatcgtcagg agcgtctggt
     7501 gctgattcag tatcgtccca aatgatctgg ctaacattag tctttgccag cttgcttagc
     7561 gttgccgggc agttgtgtca gaaacaggca acctgctttg tggcgataaa caaacggcgc
     7621 aaacatatcg tgctgtggct gggactggcg ctggcttgtc ttggtcttgc catggtgctc
     7681 tggctgctgg tcttgcagaa cgtaccggta ggcattgcct acccgatgtt aagtctgaat
     7741 tttgtctggg tgacgctggc tgcagtaaaa ctgtggcacg aaccggtatc gccgcgtcac
     7801 tggtgtgggg tggcgttcat tattggtggc attgtgatcc tcgggagtac ggtgtaatgg
     7861 gcctgatatg gggattattc agcgtcatta ttgcctcagt tgcgcaatta agcctgggtt
     7921 ttgcggcaag tcatctgccg ccgatgacgc acttatggga ttttatcgcg gctctgttag
     7981 cttttggcct ggatgcccgg atactgttac tcgggctgct gggttatctg ctttccgttt
     8041 tttgttggta taaaacgcta cataaacttg cgctaagcaa agcctatgcc ttgctcagta
     8101 tgagttatgt gctggtatgg attgcttcaa tggtacttcc cggctgggaa gggacttttt
     8161 cgctgaaagc actactggga gtagcctgta ttatgagcgg gttgatgctg attttcctgc
     8221 ccacgacaaa acaacgttac tgagttttcc ctgccgctgt acactgccgt tcccactcat
     8281 cggggctata actgcttgcc gagaggactt tcaccgtatg cagcttttca cgattaatac
     8341 aataaagcgc attctgcaaa ggcgagagta aatcccccac tttcacggcg aagtcactct
     8401 tcacttcggc gatcattttt atcgcgccgc cagcatcgca gagcataagt acatgtctgt
     8461 tatcttgttt attgcagcac gattttttga ccagccattc cattgcatta tcctgtttgc
     8521 taagagtttt cacatcaatt tacagattaa cagataaact ctttatcaac ggcaatggaa
     8581 tggcagaaat gagaagtgaa acggagggtt aattattgct gacgttgcac ccactctttt
     8641 agcgcctgac gtgaaatttt aataccgccg tttttcagct ccggcggtaa agtcagccag
     8701 cgcaccggtt gttgaaaacg agccagctta tctttcaccc attcgccaag atcaacggtt
     8761 tgctggtcat actccaccac cgctaccggc cgatgaccaa actccttgtc ggcaacggga
     8821 acgataaaca cctgcaaaac cgcaggatgt gcagcaataa cacgctcgac ttcttccggc
     8881 tgaataccct caccgccact gaataacaga ttgtctaaac gtccgacaat ggtcagcttg
     8941 ccattatgca tctcaccgcg atcgcgcgta gcgtaccagc cttcgtcatt aaccagtgaa
     9001 accagttgcc cgttacgcca gtaaccttct gccatactgg cagcccgcag ccacacttca
     9061 ttattaacga ttttcacttc ccgacccggc agcggcgaac caacgtctgc caggccgtcg
     9121 gcttctttcg cacataccgt ggaggcaaac tcggtcagac catagccgca aaagcaacga
     9181 atcccctgct cgcgcgcctg ttccgtcaac tcgaccggga tagccgcgcc gccaagtaac
     9241 accgctttca gggaaacgga actgcggtta accagcaaac gccagagttg tgttggcacc
     9301 agtgaagcgt gagtacagcc tgccagcatt tgctccaatg gctgtttatc acgcaccgtc
     9361 atccgcgcac cagcgtataa ccagcgccac ataattccct gaccggagac gtgaaacagc
     9421 ggtaaagaga gcaaccagtc atcgtgatcg ccaaacggaa tcagcgataa cacaccttgc
     9481 gcactggcaa gatgggcctg ataagtatgg acagcggctt tcggtaaacc ggtggagccg
     9541 gaggtcaatg tcattgaaca aagacgtgtt ggttgccaca gagctgaatg tgtgccttca
     9601 accatctgaa tatgcagtga agttaacgcc gggaaagtat tttctccttc cagcaccagc
     9661 gcatattgca gtgtaagatt tggcagtaat tcctcaagca acggttgcgg aagctgtgga
     9721 tttacgggca gcacccgcgc cccgcattgc agtaacgcca gccaggcgag cagcgtttgc
     9781 ggcgtattcc acgcccgcaa catcacgccg ctgccctcaa ccacaccctg cgccgcaaag
     9841 cccgtagcta actcatcgac gcgagcacaa agctcgcgcc agttgagttg ctcgtcatta
     9901 agacgtaagg cgatggcttc tccccgcact tgccgccagt gacgccacgg ccagtcagag
     9961 aagatcataa caaccgctcc agtgcatcaa cttccacgac aggcagcgtg ctacccggcc
    10021 agcgacgtac ctgctgcgcc tgcatcagat ccagcgtgtc cagccctgga atggtgtccg
    10081 gcgttaacca ggcggcaatc cgcgccagtt gcgttaagcc taagctcgac tcaatagaag
    10141 aactgatcac cgccgtcagc ctcaacgcgt gcgccgcctg tacctgctcg cgtacttttt
    10201 ccagactgcc cgtgagcgtg ggtttgataa ctaccgcgcg cacgccctct tcagccacaa
    10261 aggcaaaatc cggctcgcgc aggctttcat cccaggcaat ggcaatgccg gtttcacggg
    10321 caaacgctcg cgaatcatcg cgggttttgc acggctcttc gagaaacgcg atgcggtggc
    10381 gataatccgg gttaacatat ttggcaaact gctgaccttt cagcggtgtc caggcgcgat
    10441 ttgcgtcaag acgcaaatgc agatccggaa ttgcctccag caacagatta accaccatgc
    10501 cgtcgcgcac ggcttcgtac aatcccactt tgaccttcgc cactttctcg cctggcatat
    10561 cagcaagttt gaggatcaga tcgtcaggat cgccattaca cagtggtgcc gcacggtaat
    10621 tggccgcctg cgggagcgta tctgccagct ccgccaatgc acagcttacg ccaaaggcaa
    10681 tggaaggcat ctgcagtagc tcgcaatcgc ctgccagcca gttatttacc caggcaagca
    10741 gcacgctttg cgcctcttcc caggtttcct ggctgaagcc cggcagtggg gagatctccc
    10801 cccacccttc gcgctcgccc tcacgcaggc aaacgtacag cccgtcgcgg gtttttaacc
    10861 gcctgtcgcg cagaaccacc cccgcgtcca tggggatctg ccagcggtat acctgcgcgc
    10921 tacgcattac ggattccgtt taaatttgct gaaatcaggc tgacgtttct ggttgaaagc
    10981 gttgcgacct tcctgacctt cttccgtcat gtagaacagc atggtggcgt tgcccgccag
    11041 ctcctgcagc cccgcctgcc cgtcacagtc ggcgttcagt gcagctttca ggcagcgcag
    11101 cgccatcgga ctgttttgca gcatttcgcg gcaccagcga acggtctctt tttccagatc
    11161 cgccagcggt accacggtgt tgacaaggcc catatccagc gcctgtttcg cgtcgtactg
    11221 acggcacagg aaccagattt cccgcgcttt tttctgtccg acgatgcgag ccatgtagga
    11281 agcgccccag ccgccgtcga aggaaccgac tttcgggcca gtctgaccga agatggcatt
    11341 atctgccgcg atagtcaggt cgcacatcat gtgcagaacg tgaccgccgc cgatggagta
    11401 gccagccacc atcgcgacaa ccggtttcgg acaggtacgg atctgacgct ggaagtccag
    11461 cacgttcagg tgatgtacgc cggaatcatc tttatagccg ccgtaatcac cacgcacttt
    11521 ctggtcaccg ccggagcaga acgctttatc acctgcgcca gtcagaatga tcacgccgac
    11581 gttgtcgtca taacgcgcat ctgccagtgc ctggatcatc tcttttaccg tcagaggacg
    11641 gaaggcattg cgcacctgcg gacgattaat ggtgattttt gcgataccat cggtggattt
    11701 ttcataacga atgtcctcga aaccttcgga gcagtcgtgc cattcaaccg gtgcgtaaag
    11761 cattgcttca tcaggataaa tcatattgtg tcctttagtc agaaacgcaa gatctgcgcc
    11821 agacttgcga ttacgccagc gggattttcc cgatgcgcgt tatgtccggc gcgaggaatg
    11881 acatggcagt cggcagccag ttccgccgcc agggcgcgga atttgctgtc acgttcacca
    11941 cataaataat aaaacgcaaa tgtgcgggcg ctaaggttag cacgtaaatc aggctggacg
    12001 gcgagagaag tcgcctccag catggcggca agggttgcgc cattattgtt gctgcgcagc
    12061 gccaccagct cccggcgttg atcgtcattg agcgaggcaa aaacaggctg ttgataccag
    12121 tcggcaaata ccgccgttaa cggttctgtg cgaaaacgct gcgcccattg gcgatcggaa
    12181 cgctgacgtt ccgcacgttg ttcagcattt tgcagccccg gatgcccgcc ttcgacaata
    12241 accccacaaa gccccgccag cccctggcaa gccgccatca tcgccacccg tccgccaagc
    12301 gagtacccca ccagccagaa gtcaaggatg ttgtaactaa ccaaggtttt acgcagtaag
    12361 tcggtgacat catcaaatcc atcgacgcta atcgccgccg aaccaccatg acctgggaga
    12421 tcaacataca accgtgagta gtcggcaaac gcctcgccca cttcttgcca ttcgtggcaa
    12481 tcgccggaaa aaccgtgcaa aaacaccagc cagggtaaac ctggttttcc gtgttttgcc
    12541 tgcgcgtgca ggatcataaa tggcttacct gcgccagaag ttgctggagc gtttgcgcac
    12601 catcggtgtc gttaaccacc atttcaatca ccgtggtggt tggcgtgcgc caggcgtcgg
    12661 caaatgccgt ttcaagttcc tgccagtttt gcggacgatg atatttcagc tcgaacatcg
    12721 cggcggcgtg ctcaaaatgg acgttttgcg gcatcagata gaaacgctca cgctcgcttt
    12781 gcggcgttgg caacagcgag aaaatttgcc cgccgttgtt gttcaccaca attaatacca
    12841 gcggcgcaga aacctgacgc aataacgcca gcgcgttgag atcgtaaagt gcggagagat
    12901 cgcccacaat cgccagcgtc ggtttgccgc ttgcccgctg aacgcctgcg gcggtcgaaa
    12961 gcagtccgtc gataccgctg gcccctcggt tgctgtacac cgggtaacct gccggaagtt
    13021 gcgaaagcgc atcaatcaga cgtaccacca ggctgttacc gacaaacaat tgcccctgtt
    13081 caggcagata gtcgctgatg cgatgcgcca gttgcgcttc gccaaacgca tcgcgacggg
    13141 caataaccgc ctgcattgcc tgttccgcca ggcgcgggat ttcaacgcac cagggctggc
    13201 gtttttctgc cggatgcagc tccagccagt cggcaatatt ggcaattaag cggcgtccac
    13261 gatggtgcgc cggatcaagc cgcccttcga tgtcatccac aatccagtac tcttcgggtt
    13321 cacagcttgc ctgccattgc aggagccgtt tgcccgtcag gctgcttccc agttgcacca
    13381 caatttgcgc ctgctgcagc tcgctggtcg ctttggcatt gcctaaccaa agatcggcac
    13441 acggcagcgg ctgcccggtt tgtgacagca catcgccaat cagcggccag ccaagagttt
    13501 gcgcccacag ggcaactttt ttgccctctt ccgcactcat gcgcccggca accaccacgc
    13561 cgcgcttttg tcgccagaag aaccagtcgc gctgtttttc actttccaga ctaggcgctt
    13621 cacgcagcca cggtttgtcg tcctgccacc agtcacccag acgctgttgc cagctaagcc
    13681 cggtatcgtc catttcgcca tacagcggtt cagcaaacgg gcagttgata tggactcccc
    13741 ccgcatgaag cgtaccgaga gcgtggtcga tggtagaaac cagccaacgt gcggggatat
    13801 cctgggtcgg gcgcggcaat gaaatactgt gcgtggggtg agaggcgaac attcccggct
    13861 ggcgaattgc ctgattcgcg ccgcagtcaa ttagctccgg cgggcgatcg gcggttaaga
    13921 gaatcagttt ttctccggtt aacccggctt caatcagtgc cggatagaga tttgccaccg
    13981 cagtgccgga ggtcacaatc accgccaccg gctgcttgct gactttcgcc agccccagcg
    14041 ccagatgccc caacccacgc tcatcgaaat gggtgtggtg aatgaatgcg gaattctccg
    14101 ccgccgctaa cgttaacggt gtagaacgcg agcctggggc gatacagatg tgtctgacgc
    14161 cgtgacgcgt taatgcttcc agaatgaccg ccgcccagcg tcggttaaat gcgcttactg
    14221 acatgagttt gtccggtatc aatattgcgg ctaagtataa ggagctacaa aaatagatta
    14281 ttgatatgaa tcggtaatga tgcgactcat tactattcca tttgtaataa agtacgcaac
    14341 cctgccgctt tgttgtcgat ttcctgccac tcttgctcgg ggtcggaacc acggacaatg
    14401 cccgcgccag catataatcg cacgacattg ccgctaattt ttgctgagcg cagggaaacg
    14461 cagaattcgc tttgttgtaa tgagagatag cccgcagaac cggcgtacca ttctcgggtg
    14521 aacggttcgt gacgggcgat aaactgtcgc gccagatcgc gcggtaagcc agcaactgct
    14581 gccgttggct gcaactgatg taaacagatc acatcatccg ctttgttgag tgaagtccag
    14641 atacagcggc gaagatgctg cactttacgc agacgcagta cctgcggcgg taaaacatcc
    14701 agcgtctggg tatcggcctg taatcgttgg cagatatctt ccaccaccag catgttctcg
    14761 cgctggtttt tatcatccgc catcagccac tcttctaact gctgcgcctg cttatcatca
    14821 ggatgatttg ctactgttcc cgccagcgct tcagtacgca gcgctttgtc acgccgccgc
    14881 cataaccgtt ccggtgaaga gccaagaaaa gcattttcgc catcaaaggc catgtaaaaa
    14941 tggtagcaat tcagattcag tcgacgactg gcagccatca tcgccgccgc gttgaccgga
    15001 cttgcgaaat gcaggtcagt tgcccgagcg agcaccactt tgtcgagctc accttcggcg
    15061 atggttttcg ttgccagttc gattaattgc gtccagcccg ttttgtccgg ccagtgttgt
    15121 tctcgcgtgg tggttaaatg taacccaggc aagggcttga tactcaccag tgtggcgata
    15181 aattcttttg cctgaatcgc atcgtgctga agggagcttt cgctgaatag cgtcagccgc
    15241 agcgtggctt taccgccaca gcgtcgccat tccaggcggg gtaaaagtaa attgccctgc
    15301 gacgggtcaa aagcattcag cccccaaatg cgtaagtcgg cgtgttccgg gtgctggcga
    15361 agaaaacgtt gtgcctggtc caacgacgta aaacgggtaa tcgcgcccag gacggcagct
    15421 tcttcatcac cattacgttg ttgccagtag aattgcgggt acgtttgctg actggccagc
    15481 cagctcaagg catcaaaagc gtctttgaga gggaaaggaa tatcgataac ccgaatgccg
    15541 ggtgtcgccg gaatctcttg cgacaaatgg cgcagtagat tttccagcgc cgtagtaagt
    15601 gattgcacgc ggacctctcc ctgttaaaag cctcacatta tacggggtac tacaaaaaaa
    15661 atgcagtacc ccggtgtagg gaggttttaa cggcgtgcca gcaacagtcc tagtaccagc
    15721 ccaacggccg cgcccacacc aattccttgc caaggttttt cgtggacgta gtcatcagca
    15781 cgataaacag cctgcttcgc ccgatagtaa taactgtctg aaacctggct aacccgtttt
    15841 ttcacatcat ccagcgcttt ttctgcacgc gctttcagct caacatattt ctgatcagcg
    15901 ggatcgccag aggagcggag cacctcttcc agtgtctcac taagcagcgt caggtcgtca
    15961 tcgatacgtg tatcaccaaa ctgattagac attctcgttc tccatttgcg taaaacctgt
    16021 cactaactat agacaagggt tgttgattac gcctgaatta cctcgcgtgc catcccaatg
    16081 tgtgggatac catcttcttc atagacctcc gtcacaggga taaaaccgaa actctggtag
    16141 aagttttgca gatgcgcctg cgccccgagg taaacaggct tatcaggcca gtgatgcgtg
    16201 caggtgtcga gggttttact catcagttgc tgccccactt tttcgccacg caacgcttca
    16261 ctgacaatca cccgaccaat aacgaccggc tcaagatcat catcactttt cagaatcctc
    16321 gcatatgcca ccagttcatc atttttccaa ccgagaatat ggcgattatc ccccgtcaaa
    16381 tcatcaccat cgatatcctg ataagggcaa ttctgctcga caacaaacac cgcgcaacgc
    16441 agttgtaata aggcataaag ctgggaaacc gataattcag agtgatgcag atcttgccat
    16501 tcaatcataa tgctctcctt ttagatgtat accttatact agccggaata ttttttgaaa
    16561 cgtgatgaac tcatggaatt aattttttta ggtacttcag ccggtgtgcc aacccgcacg
    16621 cgcaatgtca cggcaatatt gcttaacctg caacatccga cccagagcgg actttggttg
    16681 tttgactgcg gtgaaggcac ccagcatcag ctactgcata ccgcctttaa ccctggaaaa
    16741 ctggacaaga tttttatcag tcaccttcat ggcgatcatc tttttggttt acccggcttg
    16801 ctgtgcagtc gttctatgtc aggcattatc caacccttaa cgatttatgg tccgcaaggt
    16861 atccgtgaat ttgtggaaac cgcgctgcgg attagcggct catggaccga ttatccgctg
    16921 gaaattgtcg aaattggcgc tggcgaaatt ctcgatgatg gcctgcgcaa agtaaccgct
    16981 tatccgctgg aacacccact ggaatgttat ggctatcgta ttgaagaaca tgataaaccg
    17041 ggtgcattaa atgcccaggc attaaaagct gctggcgtgc cgcctggccc actgtttcag
    17101 gaattaaaag cgggcaaaac aatcacgctg gaagatggaa ggcagattaa cggcgcagat
    17161 tacttagctg ctccagtgcc aggtaaagcg ctcgctattt tcggcgatac cggcccctgc
    17221 gatgccgcac ttgacctggc taaaggtgtc gatgtcatgg tgcacgaagc gacgctggat
    17281 ataaccatgg aagccaaagc caatagtcgc ggccatagct ctacacgcca ggctgcgaca
    17341 ctagcccgtg aggctggagt cggtaagcta atcattaccc acgtcagctc gcgctatgat
    17401 gacaaaggtt gtcagcacct gttacgtgaa tgcaggtcaa ttttcccggc gactgaacta
    17461 gcgaatgatt tcaccgtgtt taacgtttaa ctctg
//
LOCUS       DADMJE010000082        17483 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.083, whole genome shotgun sequence.
ACCESSION   DADMJE010000082 DADMJE010000000
VERSION     DADMJE010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17483)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17483)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17483
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.083"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(34..2631)
                     /gene="topA"
                     /locus_tag="JN001_002443"
     CDS             complement(34..2631)
                     /gene="topA"
                     /locus_tag="JN001_002443"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000513601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HAY9053645.1"
                     /translation="MGKALVIVESPAKAKTINKYLGSDYVVKSSVGHIRDLPTSGSAA
                     KKSADSTSTKTAKKPKKDERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAEK
                     ADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQAFNKPGELNID
                     RVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEE
                     FWEVDASTTTPSGEALALQVTHQNDKPFRPVNKEQTQAAVSLLEKARYSVLEREDKPT
                     TSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNM
                     VRGYISDNFGKKYLPESPNQYASKENSQEAHEAIRPSDVNVMAESLKDMEADAQKLYQ
                     LIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRILRFDGWTKVMPALRKGDEDRIL
                     PAVNKGDALTLVELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASIISTIQDRG
                     YVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMENSLDQVANHEAEWKAVLDH
                     FFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCPTCGRKMGIRTASTGVFLGCSGYAL
                     PPKERCKTTINLVPENEVLNVLEGEDAETNALRAKRRCPKCGTAMDSYLIDPKRKLHV
                     CGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNEECKNTR
                     KILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRAPLVE
                     ELYRFRDRLPEKLRYLADAPQQDPEGNKTMVRFSRKTKQQYVSSEKDGKATGWSAFYV
                     DGKWVEGKK"
     gene            3011..3262
                     /locus_tag="JN001_002444"
     CDS             3011..3262
                     /locus_tag="JN001_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciN family protein"
                     /protein_id="HAY9053646.1"
                     /translation="MNKETQPIDRETLLKEANKIIREHEDTLAGIEATGVTQRNGVLV
                     FTGDYFLDEQGLPTAKSTAVFNMFKHLAHVLSEKYHLVD"
     gene            complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JN001_002445"
     CDS             complement(3298..4347)
                     /gene="sohB"
                     /locus_tag="JN001_002445"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease SohB"
                     /protein_id="HAY9053647.1"
                     /translation="MELLSEYGLFLAKIVTVVLAIAAIAAIIVNVAQRNKRQRGELRV
                     NNLSEQYKEMKEELAAALMGSHQQKQWHKAQKKKHKQEAKAAKAKAKLGEVATDSKPR
                     VWVLDFKGSMDAHEVNSLREEITAVLAAFKPQDQVVLRLESPGGMVHGYGLAASQLQR
                     LRDKNIPLTVTVDKVAASGGYMMACVADKIVSAPFAIVGSIGVVAQMPNFNRFLKSKY
                     IDIELHTAGQYKRTLTLLGENTEEGREKFREELNETHQLFKDFVKRMRPSLDIEQVAT
                     GEHWYGQQAVEKGLVDEINTSDEVILSLMEGREVVNVRYMQRKRLIDRFTGSAAESAD
                     RLLLRWWQRGQKPLM"
     gene            4567..5325
                     /locus_tag="JN001_002446"
     CDS             4567..5325
                     /locus_tag="JN001_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciK family oxidoreductase"
                     /protein_id="HAY9053648.1"
                     /translation="MHYQPKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGR
                     NEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIVVNYPRLDGVLHNAGL
                     LGDICPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRA
                     NWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASAFPTEDPQKLKTPA
                     DIMPLYLWLMGDDSRRKTGMTFDAQPGRKPGISQ"
     gene            5322..5913
                     /gene="cobO"
                     /locus_tag="JN001_002447"
                     /pseudo
     CDS             5322..5913
                     /gene="cobO"
                     /locus_tag="JN001_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415786.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
     gene            complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JN001_002448"
     CDS             complement(5953..6825)
                     /gene="rluB"
                     /locus_tag="JN001_002448"
                     /EC_number="5.4.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2605) synthase RluB"
                     /protein_id="HAY9053649.1"
                     /translation="MSEKLQKVLARAGHGSRREIESIIEAGRVSVDGKIAKLGDRVEV
                     TPGLKIRIDGHLISVRESAEQICRVLAYYKPEGELCTRNDPEGRPTVFDRLPKLRGAR
                     WIAVGRLDVNTCGLLLFTTDGELANRLMHPSREVEREYAVRVFGQVDDAKLRDLSRGV
                     QLEDGPAAFKTIKFSGGEGINQWYNVTLTEGRNREVRRLWEAVGVQVSRLIRVRYGDI
                     PLPKGLPRGGWTELDLAQTNYLRELVELPPETSSKVAVEKDRRRMKANQIRRAVKRHS
                     QVSGGRRSGGRNNG"
     gene            complement(7036..8931)
                     /locus_tag="JN001_002449"
     CDS             complement(7036..8931)
                     /locus_tag="JN001_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2207 domain-containing protein"
                     /protein_id="HAY9053650.1"
                     /translation="MAGKFRCILLLIAGLFVSSLSYAENPEIPSYEEGISLFDVEATL
                     QPDGVLDIKENIHFQARNQQIKHGFYRDLPRLWMQPDGDAALLNYHIVGVTRDGIPEP
                     WHLDWHIGLMSIVVGDKQRFLPQGDYHYQIHYQVKNAFLREGDSDLLIWNVTGNHWPF
                     EIYKTRFSLKFPDIAGNPFSEIDLFTGEEGDTYRNGRILEDGRIESRDPFYREDFTVL
                     YRWPHALLSNAPAPQTTNIFSHLLLPSTSSLLIWFPCLFLVCGWLYLWKRRPQFTPVD
                     VIETDVIPPDYTPGMLRLDAKLVYDDKGFCADIVNLIVKGKIHLEDQYDKNQQILICV
                     NEGATRNNEVLLPAEQLLLEALFRKGDKVVLTGRRNRVLRRAFLRMQKFYLPRKKSLF
                     YRPDTFLQWGGLAILAIILYGNLSPVGWAGMSLVGDMFIMICWIIPFLFCSLELLFAR
                     DDDKPCVNRAIITLFLPLICSGVAFYSLYINVGDVFFYWYMPAGYFSAVCLTGYLTGM
                     GYIFLPKFTQTGQQRYARGEAIVNYLARKEAATHSGRRRKGETRKLDYALLGWAISAN
                     LGREWALRIAPSLSSAIRAPEIARNGVLFSLQTHLSCGANTSLLGRSYSGGGAGGGAG
                     GGGGGGW"
     gene            complement(8959..9579)
                     /locus_tag="JN001_002450"
     CDS             complement(8959..9579)
                     /locus_tag="JN001_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HAY9053651.1"
                     /translation="MSQFFYIHPDNPQQRLINQAVEIVRKGGVIVYPTDSGYALGCKI
                     EDKNAMERICRIRQLPDGHNFTLMCRDLSELSTYSFVDNVAFRLMKNNTPGNYTFILK
                     GTKEVPRRLLQEKRKTIGMRVPSNPIAQALLEALGEPMLSTSLMLPGSEFTESDPEEI
                     KDRLEKQVDLIIHGGYLGQKPTTVIDLTDDTPVVVREGVGDVKPFL"
     gene            complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JN001_002451"
     CDS             complement(9576..10457)
                     /gene="yciV"
                     /locus_tag="JN001_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exoribonuclease"
                     /protein_id="HAY9053652.1"
                     /translation="MSDTNYAVIYDLHSHTTASDGCLTPEALVHRAVEMRVGTLAITD
                     HDTTAAIAPAREEISRSGLALNLIPGVEISTVWENHEIHIVGLNIDITHPLMCEFLAQ
                     QTERRNQRAQQIAERLEKAQIPGALEGAQRLAQGGAVTRGHFARFLVECGKASSMADV
                     FKKYLARGKTGYVPPQWCTIEQAIDVIHHSGGKAVLAHPGRYNLSAKWLKRLVAHFAE
                     HHGDAMEVAQCQQSPNERTQLTTLARQHHLWASQGSDFHQPCPWIELGRKLWLPAGVE
                     GVWQLWEQPQNTTEREL"
     gene            10595..10639
                     /gene="trpL"
                     /locus_tag="JN001_002452"
     CDS             10595..10639
                     /gene="trpL"
                     /locus_tag="JN001_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trp operon leader peptide"
                     /protein_id="HAY9053653.1"
                     /translation="MKAIFVLKAWWRTS"
     gene            10731..12293
                     /gene="trpE"
                     /locus_tag="JN001_002453"
     CDS             10731..12293
                     /gene="trpE"
                     /locus_tag="JN001_002453"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HAY9053654.1"
                     /translation="MQTQKPTLELLTCEGAYRDNPTALFHQLCGDRPATLLLESADID
                     SKDDLKSLLLVDSALRITALGDTVTIQALSGNGEALLTLLDNALPAGVENEQSPNCRV
                     LRFPPVSPLLDEDARLCSLSVFDAFRLLQNLLNVPKEEREAMFFGGLFSYDLVAGFED
                     LPQLSAENNCPDFCFYLAETLMVIDHQKKNTRIQASLFAPNEEEKQRLTARLNDLRQQ
                     LTEAAPPLPVVSVPHMRCECNQSDEEFGGVVRLLQKAIRTGEIFQVVPSRRFSLPCPS
                     PLAAYYVLKKSNPSPYMFFMQDNDFTLFGASPESSLKYDATSRQIEIYPIAGTRPRGR
                     RADGSLDRDLDSRIELEMRTDHKELSEHLMLVDLARNDLARICTPGSRYVADLTKVDR
                     YSYVMHLVSRVVGELRHDLDALHAYRACMNMGTLSGAPKVRAMQLIAEAEGRRRGSYG
                     GAVGYFTAHGDLDTCIVIRSALVENGIATVQAGAGIVLDSVPQSEADETRNKARAVLR
                     AIATAHHAQETF"
     gene            12293..13888
                     /gene="trpD"
                     /locus_tag="JN001_002454"
     CDS             12293..13888
                     /gene="trpD"
                     /locus_tag="JN001_002454"
                     /EC_number="2.4.2.18"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional anthranilate synthase glutamate
                     amidotransferase component TrpG/anthranilate
                     phosphoribosyltransferase TrpD"
                     /protein_id="HAY9053655.1"
                     /translation="MADILLLDNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTLIERL
                     ATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPIIGICLGHQAIVEAYGGYVGQAG
                     EILHGKASSIEHDGQAMFAGLTNPLPVARYHSLVGSNIPAGLTINAHFNGMVMAVRHD
                     ADRVCGFQFHPESILTTQGARLLEQTLAWAQRKLEPTNTLQPILEKLYQAQTLSQQES
                     HQLFSAVVRGELKPEQLAAALVSMKIRGEHPNEIAGAATALLENAAPFPRPDYLFADI
                     VGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINLDMNAD
                     KSRQALDELGICFLFAPKYHTGFRHAMPVRQQLKTRTLFNVLGPLINPAHPPLALIGV
                     YSPELVLPIAETLRVLGYQRAAVVHSGGMDEVSLHAPTIVAELHDGEIKSYQLTAEDF
                     GLTPYHQEQLAGGTPEENRDILTRLLQGKGDAAHEAAVAANVAMLMRLHGHEDLQANA
                     QTVLEVLRSGSAYDRVTALAARG"
     gene            13892..15250
                     /gene="trpCF"
                     /locus_tag="JN001_002455"
     CDS             13892..15250
                     /gene="trpCF"
                     /locus_tag="JN001_002455"
                     /EC_number="4.1.1.48"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309861.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional indole-3-glycerol-phosphate
                     synthase TrpC/phosphoribosylanthranilate isomerase TrpF"
                     /protein_id="HAY9053656.1"
                     /translation="MQTVLAKIVADKAIWVETRKQQQPLASFQNEVQPSTRHFYDALQ
                     GARTAFILECKKASPSKGVIRDDFDPARIAAIYKHYASAISVLTDEKYFQGSFDFLPI
                     VSQIAPQPILCKDFIIDPYQIYLARYYQADACLLMLSVLDDDQYRQLAAVAHSLEMGG
                     LTEVSNEEELERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGIN
                     TYAQVRELSHFANGFLIGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKAAYDAGA
                     IYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLH
                     GNEDQLYIDTLREALPTHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWS
                     LLNGQSLGNVLLAGGLGADNCVEAAQTGCAGLDFNSAVESQPGIKDARLLASVFQTLR
                     AY"
     gene            15262..16455
                     /gene="trpB"
                     /locus_tag="JN001_002456"
     CDS             15262..16455
                     /gene="trpB"
                     /locus_tag="JN001_002456"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016158396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HAY9053657.1"
                     /translation="MTTLLNPYFGEFGGMYVPQILMPALRQLEEAFVSAQKDPEFQAQ
                     FNDLLKNYAGRPTALTKCQNITAGTNTTLYLKREDLLHGGAHKTNQVLGQALLAKRMG
                     KTEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVH
                     SGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVCEFQRMIGEETKAQILE
                     REGRLPDAVIACVGGGSNAIGMFADFINETNVGLIGVEPGGHGIETGEHGAPLKHGRV
                     GIYFGMKAPMMQTEDGQIEESYSISAGLDFPSVGPQHAYLNSTGRADYVSITDDEALE
                     AFKTLCLHEGIIPALESSHALAHALKMMRETPEKEQLLVVNLSGRGDKDIFTVHDILK
                     ARGEI"
     gene            16455..17261
                     /gene="trpA"
                     /locus_tag="JN001_002457"
     CDS             16455..17261
                     /gene="trpA"
                     /locus_tag="JN001_002457"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HAY9053658.1"
                     /translation="MERYESLFAQLKERKEGAFVPFVTLRDPGIEQSLKIIDTLIEAG
                     ADALELGIPFSDPLADGPTIQNATLRAFAAGVTPAQCFEMLALIRQKHPTIPIGLLMY
                     ANLVFNKGIDEFYAQCEKVGVDSVLVADVPVEESAPFRQAALRHNVAPIFICPPNADD
                     DLLRQIASYGRGYTYLLSRAGVTGAEKRAALPLNHLVAKLKEYNAAPPLQGFGISAPD
                     QVKAAIDAGAAGAISGSAIVKIIEQHINEPEKMLAALKVFVQPMKAATRS"
BASE COUNT         4223 a         4670 c         4345 g         4245 t
ORIGIN      
        1 cctttgttta taaaaacctg acagaattaa aggttatttt tttccttcaa cccatttgcc
       61 atcaacataa aatgctgacc agccagtcgc ctttccgtct ttttccgaag agacatattg
      121 ctgtttggtt ttacggctaa agcgaaccat ggtcttatta ccttccggat cctgctgtgg
      181 cgcatcggcc agataacgca gtttttccgg cagacggtcg cggaagcgat aaagctcttc
      241 caccagtggc gcacgcgttt cacgcgattt cgggaaagtg ttggcagcca ggaaaacacc
      301 cgcagcgccg tcacgcagca cgaaataagc atctgatttt tcgcacggca gctcaggtaa
      361 tggcaccgga tcttctttcg gtggtgccac ttcgccgtta cgtaaaatct tacgtgtgtt
      421 tttacactct tcgttggtgc aggccatgta tttaccgaaa cgccccattt tcaggtgcat
      481 ttcagagcca catttttcac actcaacgat cgggccgtca taacctttaa tgcggaattc
      541 gccctcttcg atctcgtaac cgtcgcaggt tgggttatta ccacagacat gcaacttacg
      601 tttcggatcg atgagatagc tgtccatcgc cgtgccgcat ttcgggcaac gacgttttgc
      661 gcgcagcgcg ttggtttcag cgtcttcgcc ttccagtacg ttcagcactt cgttttccgg
      721 caccaggtta atggtggttt tgcaacgctc tttcggcggc agcgcataac cagaacagcc
      781 aaggaatacc ccggtgctcg ctgtgcgaat ccccattttg cgaccacaag tcgggcagtc
      841 aatgctggtc agaaccatct ggttcgggcg cataccaccc tcttccggat ctttttcagc
      901 tttatctaac tgctgggtga aatccgagaa gaagtgatcc agtacagctt tccactctgc
      961 ttcgtgattt gccacctggt cgaggctgtt ttccatctgt gcggtgaagt cgtagttcat
     1021 taactcgcgg aaattttctt caaggcgatc ggtgacgatt tcgcccattt tttccgcata
     1081 gaaacgacga ttttctactc gcacgtagcc acgatcctga atggtcgaaa tgatcgacgc
     1141 ataggtagac ggacgaccga taccgcgttt ttccagctct ttaaccagcg atgcttcact
     1201 gaaacgggct ggcggcttgg taaagtgctg ggctggtgta agttcaacga gcgtcagagc
     1261 atcgccttta ttaactgctg gtaagatgcg atcttcatcg cctttacgca acgcaggcat
     1321 cacttttgtc cagccatcaa aacgcaaaat acgaccgcgt gctttcaggc ggaaatcgcc
     1381 cgcaccaacg gtcagcgtcg tggagtcata tttcgctggg gtcatctggc aggctacgaa
     1441 ctgacgccag attaactggt acagtttctg cgcatctgct tccatatcct tcagcgattc
     1501 cgccatcaca ttgacgtcag aaggacgaat cgcttcgtgc gcttcctgtg agttttcttt
     1561 gctggcgtac tgattcggac tttccggcag atatttctta ccaaaattat cgctgatata
     1621 accgcgaacc atatttaccg cgtcctgact caggttagtg gagtcggtac gcatgtaagt
     1681 gatatagcct gcttcataca aacgctgcgc catcatcatg gtttttttca cgccaaatcc
     1741 aagacgggtg ctggcagctt gttgcagcgt agaggtaata aaaggagcgc caggtttact
     1801 ggttgtcggt ttgtcttcac gttccagcac gctgtagcgc gctttttcca gcagacttac
     1861 cgcagcctga gtttgttctt tgttgaccgg acggaacggt ttgtcgttct gatgagtcac
     1921 ctgtaacgcc aacgcttcac cagatggcgt ggtcgtgctg gcatcgactt cccagaactc
     1981 ttccggcacg aacgctttaa tttcacgctc acgctcgacc accaggcgaa ccgccaccga
     2041 ctgcacacga ccggcagaca gaccacgagc gatctttttc catagcagcg gcgaaaccat
     2101 ataccccacc acgcggtcca taaagcgacg cgcctgctgg gcattaacac gatcaatatt
     2161 cagctcaccc ggtttgttaa atgcctggcg gatcgcgttt ttagtaattt cgttaaacac
     2221 cactcggcta tagcgcgcat catcaccccc aatcacttcc cgcaggtgcc atgcaatggc
     2281 ttccccttcg cggtcaaggt cggttgcgag atagatgtgg tcggcttttt cagccagttg
     2341 tttcagttca gagacgacct tctctttacc aggcaacact tcatagtgcg cctcccaatt
     2401 gtgccacggg tcaaccccca tacggttgac gagagcgcca cgttcatcct ttttaggctt
     2461 tttagccgtc ttggtggagg tagagtcggc actctttttg gcagctgagc cactggtcgg
     2521 caaatcgcgg atgtgaccga cgctggattt caccacgtag tcactaccca gatacttgtt
     2581 gatcgttttg gcttttgccg gggactcaac gatgacaaga gctttaccca tattcacctt
     2641 acctaatttg attcttccag gaatgcgtcg cacgttgata aaccttccac tggcaacgag
     2701 ttaccgatat ggactcgttc tctgcggata tcaacccctt gtcgtgactc tgttcacgaa
     2761 aattcaggtg actgagttaa caggtcttgg cctacaggcg ctatagcacg acggaatttt
     2821 ggtcgaatgt caagcaaatc tattgccaga ttgacgaaag cgtcacactg tacctgataa
     2881 aatccgatac gcaactttat tagcatgcaa aatccaaagt tgccagtaag gcgctcttgc
     2941 caccagcgtg gtatatttgt ctgcaagcca tgcctggcgt agactaatgt ccttatttaa
     3001 ggagtaaata atgaacaaag agacacaacc catcgaccgc gaaacgctgt tgaaagaggc
     3061 caacaaaatc attcgtgagc atgaggatac gctcgcaggg attgaagcca ccggcgtcac
     3121 gcagcgtaat ggcgtgctgg tatttaccgg cgactacttt ttagatgaac aaggattgcc
     3181 aacagccaaa agcaccgcgg tgtttaatat gttcaaacac ctggcccatg tgctttcaga
     3241 aaaatatcat ctggttgatt aaagcaaaac gcgaggtctt agcctcgcgt ttgtctttta
     3301 catcaatggc ttttgacccc gctgccacca gcgtagcaac aatcgatcgg cgctctctgc
     3361 cgcgctgccg gtgaatcggt caatgagtcg tttacgctgc atatagcgta cattaaccac
     3421 ttcacggcct tccatcaggc taagaataac ttcatcactg gtgttgattt catcaaccag
     3481 gcctttctct accgcctgtt gtccgtacca gtgttcacct gttgccacct gttcaatatc
     3541 cagagacgga cgcatacgct tcacaaaatc tttaaacaac tgatgcgttt cgttcaactc
     3601 ttcgcggaat ttctcccgcc cttcttcggt attttcaccc agcaacgtca gagtacgctt
     3661 atactgcccg gcagtgtgca gttcgatatc aatatatttg cttttcagga agcggttaaa
     3721 gttgggcatt tgcgccacca ccccaatgga acccacaata gcaaacggtg cggaaacaat
     3781 tttgtccgcc acacaggcca tcatgtaacc gccgctggca gcgactttgt ctaccgtaac
     3841 agttaaagga atgtttttat cacgcagacg ctgcagctgc gaagccgcca acccgtaacc
     3901 atgcaccatg ccaccagggc tttccagacg gagcacaacc tgatcctgcg gtttgaatgc
     3961 tgcgagtacc gccgttatct cttcacgtag cgagttcact tcatgggcgt ccatgctgcc
     4021 tttaaaatcc agcacccaga cgcgaggttt actgtcagtt gccacctcgc ccagtttggc
     4081 tttcgctttt gctgctttcg cttcttgctt gtgctttttc ttctgcgctt tgtgccactg
     4141 tttttgctga tgtgagccca tcagcgccgc ggccagttct tctttcatct ccttatactg
     4201 ttcgctgaga ttgttgaccc gtaactcgcc acgctggcgt ttattacgtt gagcaacatt
     4261 gacaataatg gcggcaatcg ccgcaatcgc tagcacaacg gtaacgattt tcgccaaaaa
     4321 caaaccatat tcagacaaca attccacgag tccccacctt ggttaaacaa cgctttggct
     4381 cacagtttac aacaggcatg ttaagccgtc tcgcagagat gttattgcag cgaaagtatg
     4441 acaaagtatc cattttgcgg tgttatcgcc ccaggctgat tgaaatgccc ttctgtttca
     4501 ggcataaagc cccaaagtca taaagtacac tggcagcgcg acagacaacg tcgttgagga
     4561 gtagccatgc attaccagcc aaaacaagat ttactcaatg atcgcattat cctggtgacg
     4621 ggagccagcg atgggattgg tcgtgaagcc gcgatgacgt atgcacgcta tggtgcgaca
     4681 gtgattctgt tgggccgtaa tgaagaaaaa ttacgtcagg tagccagcca cataaacgaa
     4741 gaaactgggc gtcagccaca gtggtttatt ctcgatttgc tgacctgcac gtccgaaaat
     4801 tgccaacaac tggcacagcg cattgtcgtt aattatccgc gtctggatgg tgttttgcat
     4861 aatgccggat tgctcggcga tatttgccca atgagcgaac aaaatccgca ggtctggcag
     4921 gacgtcatgc aggtcaacgt taatgccacc tttatgctca cccaggcact gcttccttta
     4981 ttactcaaat cggacgccgg ttcactggtc tttacttcat caagcgttgg acgtcaggga
     5041 cgagctaact ggggtgcata tgcagcgtcg aaatttgcca ccgaagggat gatgcaggta
     5101 ctggccgatg aatatcagca gcgcctgcgc gtcaactgca ttaacccagg cggtacgcgc
     5161 accgcaatgc gcgcaagcgc cttcccgacc gaagatccac agaaacttaa aacacccgct
     5221 gatatcatgc cgctctacct ctggctgatg ggcgatgaca gccgccgtaa aaccggcatg
     5281 acctttgacg cccaaccggg ccgtaaacca ggaatttccc aatgagtgat gaacgctacc
     5341 aacagcgtca gcagcgagtg aaagaaaaag tagatgctcg tgtggcacag gccccaggat
     5401 gaacgcggta ttatcatcgt ctttaccggc aatggaaaag gcaaaaccac cgcggcattt
     5461 ggtacggcaa cacgcgcagt tggtcacgga aaaaaagtgg gcgtcgtgca gtttattaaa
     5521 ggcacctggc ctaatggcga acgcaatctg ctggaaccac atggcgttga gtttcaggtg
     5581 atggcaacgg gctttacctg ggatacacaa aaccgcgagt ctgataccgc cgcctgccgc
     5641 gaagtctggc aacatgcaaa gcggatgctt gctgattcct cactggatat ggttttgctt
     5701 gatgaactga cgtatatggt ggcgtatgac tatttgccac tggaagaagt ggtgcaggcg
     5761 ttaaatgaac gtccacatca acagacggtg attatcacgg gtcgaggctg tcatcgggat
     5821 attcttgaac tggcggatac ggtaagtgag ctgcgcccca tcaaacatgc gtttgatgcc
     5881 ggtgttaagg cgcaaatagg gattgattat taatctgtaa aaatgccgga tatgacgtcc
     5941 ggcatacttt gattaaccgt tattacgccc gccagaacga cgaccgccgc tcacctgact
     6001 gtgacgtttc accgcacgac gaatctgatt agccttcatg cgacgacggt ctttttctac
     6061 agcgacttta gagctggttt ctggcggaag ctccaccagt tcgcgcagat agttagtctg
     6121 ggcgaggtcc agctccgtcc agccaccgcg tggcagacct tttggcagtg ggatatcacc
     6181 gtaacgaaca cggatcaggc ggctcacctg cacaccaacc gcttcccaca gacgacgaac
     6241 ttcacggtta cggccttcgg tcagagtcac gttgtaccac tggttgatcc cttcgccgcc
     6301 gctgaacttg atggttttaa aagctgccgg accatcttcc agttgcacgc cacgactcaa
     6361 atcacgcagt ttcgcgtcgt caacctgacc aaatacacgc acggcgtatt cacgttcaac
     6421 ttcacggctt ggatgcatta aacggtttgc cagttcacca tcggtggtga acagcagcag
     6481 accacaggtg ttaacgtcca gacgacctac ggcaatccag cgtgcgccac gcagctttgg
     6541 cagacggtca aacaccgtcg gacgcccttc cggatcgtta cgggtacaca actcaccttc
     6601 cggtttgtaa taggccagaa cgcgacaaat ttgttcagcg gactcacgta ccgaaatcag
     6661 atgaccatcg atacgaattt tcagcccagg ggtaacttca acgcgatcgc cgagtttagc
     6721 aattttgcca tcaacactca cacgaccggc ttcaataata gattcgattt cacggcggga
     6781 gccgtggcca gcgcgggcca gcactttctg taatttttcg ctcatagagc ttccttttgg
     6841 tgtcgccttc ccaggcgtct gatatgcttt tgtgcaacag tgagtcagaa cttacatctg
     6901 actcactgat agtaaagtct gtttgaactc ttcaggcctt aagtaaacga ctcgacgttt
     6961 atcggcctgg ctttgaggcg caacatacta cactatcttt atggttaaag cttgtttcga
     7021 ttaacatcag cttaattacc agccaccacc gcctccgcca cccgcgccgc cgccagcacc
     7081 accaccggaa taacttcgcc ccaacaaact ggtattggcc ccgcaactta ggtgcgtctg
     7141 taatgagaat aaaacgccgt tacgggcaat ctctggagcg cgaatcgccg aagaaagcga
     7201 aggggcaatg cgtaacgccc attccctccc caaatttgcc gatatagccc aacctagcaa
     7261 cgcgtaatcc agtttccgtg tttccccttt ccgccgacgt ccactgtgtg ttgctgcctc
     7321 tttacgcgca agatagttaa cgatagcttc accgcgggca taacgttgct gcccagtttg
     7381 ggtaaacttt ggcagaaaaa tataccccat gccagtgaga taaccggtca ggcaaacagc
     7441 gctaaaataa cccgctggca tataccagta aaagaataca tctccgacat tgatatagag
     7501 agaatagaag gccacgcctg aacaaatcag tggtaaaaac aaagtgatga ttgcacgatt
     7561 aacgcaaggc ttgtcatcat cgcgggcaaa caaaagctca agggaacaaa ataaaaaagg
     7621 aataatccag cagatcataa taaacatatc gcctaccaga ctcattcctg cccaacctac
     7681 gggactcagg ttaccgtaga gaatgatcgc caatattgcc agtccacccc attgcaaaaa
     7741 cgtatcaggc cggtaaaaca aagacttttt acgcggcaga taaaatttct gcatccgtaa
     7801 aaatgccctg cgtaagactc tgttgcgtct ccccgtaaga acgaccttat cgcctttacg
     7861 aaataacgct tccagtaata actgctctgc gggcagtaat acctcattat ttctggtcgc
     7921 gccttcatta acacaaatca ggatttgctg gttcttatca tactgatctt ccagatgaat
     7981 ttttcccttc acgatcagat ttacgatatc ggcacagaaa cctttatcgt cgtaaaccag
     8041 cttcgcatcg agacgtaaca tgccgggcgt gtaatctggc ggaatgacat cggtttcaat
     8101 cacatctacc ggcgtaaatt gcggcctgcg cttccagaga tataaccatc cacaaaccag
     8161 gaatagacac ggaaaccaaa ttaacaacga tgacgtggag ggtaaaagaa gatggctgaa
     8221 aatattcgtc gtttgtggag ccggggcatt gctaagtaac gcgtgaggcc agcggtagag
     8281 taccgtgaaa tcttcacgat aaaacggatc gcgggattca attcttccgt cctcaaggat
     8341 gcggccattt cgatatgtgt cgccctcttc tccagtaaag agatcgattt cgctaaatgg
     8401 attacccgcg atatcaggga acttgagtga aaatcgggtc ttatagattt caaacggcca
     8461 gtggttacca gtcacgttcc agattaacag atctgaatct ccctcacgca ggaaagcatt
     8521 tttaacctga taatgaattt gataatgata gtcgccttga ggcaagaaac gttgtttatc
     8581 gcccacgaca atactcatta acccgatatg ccagtcaaga tgccagggtt caggaatacc
     8641 atcacgagtg acgccaacaa tatgatagtt cagcagtgca gcgtccccat caggctgcat
     8701 ccagagtcgt ggtaaatcac gataaaatcc gtgcttaatc tgctgatttc gcgcctgaaa
     8761 atgaatattt tctttgatgt cgagcacccc atccggttgc agagtggctt caacatcaaa
     8821 gagcgagatc ccttcttcat aagaagggat ctccgggttt tctgcataac ttagagatga
     8881 tacaaacagc cctgctatca acagcaaaat gcagcgaaac ttccctgcca tagtcttcca
     8941 tccgtggaac gcaatttgtt ataagaaagg cttcacatca cccacgcctt cacgcaccac
     9001 gaccggcgta tcatcggtaa gatcaatgac cgttgtcggt ttctgtccga gatagccgcc
     9061 gtggataatc aaatccacct gtttttccag acggtcttta atttcttctg gatcggattc
     9121 ggtaaattcg ctgcctggca gcattagcga agtggaaagc atcggttcgc ccagtgcttc
     9181 aagcaacgcc tgcgcaatcg ggttagaagg cacacgcata ccgatggttt tgcgtttttc
     9241 ctgcaacaga cggcgtggca cctccttcgt ccccttcagg atgaaggtat agttgcccgg
     9301 cgtgttgttt ttcattaaac gaaacgcaac gttatccacg aatgaatagg tcgaaagttc
     9361 agaaagatcg cgacacatca gggtaaagtt gtgaccgtcc ggcagctggc gaatacgaca
     9421 aatacgctcc atcgcgtttt tatcttcaat tttacagccg agcgcatagc cggaatcagt
     9481 tggataaaca atcaccccgc ctttacgcac gatctccacc gcctggttga tcagacgttg
     9541 ctgcgggtta tcaggatgaa tataaaaaaa ctggctcata attccctctc tgtggtgttc
     9601 tgcggctgtt cccatagctg ccagacgcct tcaacgcctg cgggcagcca gagtttacga
     9661 cccagttcga tccacgggca tggctgatga aaatcagatc cttgtgatgc ccataaatga
     9721 tgctgacgcg caagtgtcgt caactgggtg cgttcattgg gcgattgctg gcactgcgcg
     9781 acttccatcg cgtcgccgtg gtgttcggca aaatgcgcaa ccaatctttt cagccattta
     9841 gcactaagat tgtaccgccc aggatgagct agcaccgcct taccgccaga atgatgaatg
     9901 acatcaatag cttgttctat tgtacaccac tgtggcggaa cgtatccggt tttcccgcgc
     9961 gccagatact ttttaaagac atctgccatt gaactggctt tgccgcactc aacaaggaaa
    10021 cgcgcaaaat gaccgcgcgt cactgcgccg ccctgcgcca gtcgttgtgc gccttccagc
    10081 gccccaggta tttgcgcttt ttcaagtctt tcggcaattt gctgcgcccg ctgattgcgc
    10141 cgttctgtct gctgcgcgag gaactcacac attagcggat gagtaatatc aatattcagc
    10201 ccgacaatat gaatttcatg attttcccag accgtggaaa tttccacgcc gggaataaga
    10261 ttcagcgcca gtcccgaacg tgaaatttcc tctcttgctg gcgcgattgc agctgtggtg
    10321 tcatggtcgg tgatcgccag ggtgccgacg cgcatctcga ctgcacggtg caccaatgct
    10381 tctggcgtca ggcagccatc ggaagctgtg gtatggctgt gcaggtcgta aatcactgcg
    10441 taattcgtgt cgctcaaggc gcactcccgt tctggataat gttttttgcg ccgacatcat
    10501 aacggttctg gcaaatattc tgaaatcagc tgttgacaat taatcatcga actagttaac
    10561 tagtacgcaa gttcacgtaa aaagggtatc gacaatgaaa gcaattttcg tactgaaagc
    10621 ttggtggcgc acttcctgaa acgggcagta tattcaccat gcgtaaagca atcagatacc
    10681 cagcccgcct aatgagcggg cttttttttg aacaaaatta gagaataaca atgcaaacac
    10741 aaaaaccgac tctcgaactg ctaacctgcg aaggcgctta tcgcgacaac ccgactgcgc
    10801 tttttcacca gttgtgtggg gatcgtccgg caacgctgct gctggaatcc gcagatatcg
    10861 acagcaaaga tgatttaaaa agcctgctac tggtagacag tgcgctgcgc attacagcat
    10921 taggtgacac tgtcacaatt caggcacttt ccggcaacgg cgaagccctg ctgacactac
    10981 tggataacgc cctgcctgcg ggtgtggaaa atgaacaatc accaaactgc cgtgtgctgc
    11041 gcttcccccc tgtcagtcca ctgctggatg aagacgctcg cttatgctcc ctttcggttt
    11101 ttgacgcttt ccgtttattg cagaatctgt tgaatgtacc gaaggaagaa cgagaagcaa
    11161 tgttcttcgg cggcctgttc tcttatgacc ttgtggcggg atttgaagat ttaccgcaac
    11221 tgtcagcgga aaataactgc cctgatttct gtttttatct cgctgaaacg ctgatggtga
    11281 ttgaccatca gaaaaaaaac acccgcattc aggccagcct gtttgctccg aatgaagaag
    11341 aaaaacaacg tctcactgct cgcctgaacg atcttcgcca gcagctgacc gaagccgcgc
    11401 cgccgctgcc ggtggtttcc gtgccgcata tgcgttgtga atgtaaccag agcgatgaag
    11461 agttcggtgg cgtggtgcgt ttgttgcaaa aagcgattcg caccggagaa attttccagg
    11521 tggtgccgtc tcgccgtttc tctctgccct gcccgtcacc gctggcggcc tattacgtgc
    11581 tgaaaaagag taatcccagc ccgtacatgt tttttatgca ggataatgat ttcaccctgt
    11641 ttggcgcgtc gccggaaagt tcgctcaagt atgacgccac cagccgccag attgagatct
    11701 acccgattgc cggaacacgc ccgcgcggtc gtcgcgccga tggttcactg gacagagacc
    11761 tcgacagccg catcgaactg gaaatgcgta ccgatcataa agagctttct gaacatctga
    11821 tgctggtgga tctcgcccgt aatgatctgg cacgcatttg cacccccggc agccgctacg
    11881 tcgccgatct taccaaagtt gaccgttact cttacgtgat gcacctggtc tcccgcgtgg
    11941 tcggtgagct gcgccacgat ctcgacgccc tgcacgctta ccgcgcctgt atgaatatgg
    12001 ggacgttaag cggtgcgccg aaagtacgcg ccatgcagtt aattgccgag gcggaaggtc
    12061 gtcgccgcgg cagctacggc ggcgcggtag gttatttcac cgcgcatggc gatctcgaca
    12121 cctgcattgt gatccgctcg gcgctggtgg aaaacggtat cgccaccgtg caagccggtg
    12181 ctggcatagt ccttgattct gttccgcagt cggaagccga cgaaacccgt aataaagccc
    12241 gcgctgtact gcgcgctatt gccaccgcgc atcatgcaca ggagactttc tgatggctga
    12301 cattctgctg ctcgataata tcgactcttt tacgtacaac ctggcagatc agttgcgcag
    12361 caatgggcat aatgtggtga tttaccgcaa ccatattccg gcgcagacct taattgaacg
    12421 cctggcgacg atgagcaatc cggtgctgat gctttctcct ggccccggtg tgccgagcga
    12481 agccggttgt atgccggaac tcctcacccg cttgcgtggc aagctgccca ttattggcat
    12541 ttgcctcgga catcaggcga ttgtcgaagc ttacgggggc tatgtcggtc aggcgggcga
    12601 aattctccac ggtaaagcct ccagcattga acacgacggt caggcgatgt ttgccggatt
    12661 aacaaacccg ctgccagtgg cgcgttatca ctcgctggtt ggcagtaaca ttccggccgg
    12721 tttaaccatc aacgcccatt ttaatggcat ggtgatggca gtacgtcacg atgcggatcg
    12781 cgtttgtgga ttccagttcc atccggaatc cattcttact acccagggcg ctcgcctgct
    12841 ggaacaaacg ctggcctggg cgcagcggaa actagagcca accaacacgc tgcaaccgat
    12901 tctggaaaaa ctgtatcagg cgcagacgct tagccagcaa gaaagccacc agctgttttc
    12961 agcagtggta cgtggcgaac tgaaaccgga acaactggcg gcggcgctgg tgagcatgaa
    13021 aattcgcggc gagcacccga acgagatcgc cggagcagca accgcgttac tggaaaacgc
    13081 cgcgccgttc ccgcgcccgg attatctgtt tgccgatatc gtcggcaccg gtggtgacgg
    13141 cagtaacagc atcaatattt ccaccgccag tgcgtttgtc gccgcggcct gtgggctgaa
    13201 agtggcgaaa cacggcaacc gtagcgtctc cagtaaatct ggttcgtccg atctgctggc
    13261 ggcgttcggt attaatcttg atatgaatgc cgataaatcg cgccaagcgc tggatgagtt
    13321 aggcatatgt ttcctctttg cgccgaaata tcacaccgga tttcgccatg cgatgccggt
    13381 tcgccagcaa ctgaaaaccc gcactctgtt caacgtgctg ggaccattga ttaacccggc
    13441 gcatccgccg ctggcgttaa ttggtgttta tagtccggaa ctggtgctgc cgattgccga
    13501 aaccttgcgc gtgctggggt atcaacgcgc ggcggtagtg cacagcggcg gtatggatga
    13561 agtttcatta cacgcgccga caatcgttgc cgaactgcat gacggtgaaa ttaagagcta
    13621 tcagctaact gcagaagatt ttggcctgac accctaccac caggagcaac tggcaggcgg
    13681 aacaccggaa gaaaaccgtg acattttaac acgcttgtta caaggtaaag gcgacgccgc
    13741 tcacgaagca gccgtcgcgg cgaatgtcgc catgttaatg cgcctgcatg gccatgaaga
    13801 tctgcaagcc aatgcgcaaa ccgttcttga ggtactgcgc agtggttccg cttacgacag
    13861 agttaccgca ctggcggcac gagggtaaat gatgcaaacc gttttagcga aaatcgtcgc
    13921 agacaaggcg atttgggtag aaacccgcaa acagcagcaa ccgctggcca gttttcagaa
    13981 tgaggttcag ccgagcacgc gacattttta tgatgcgcta cagggtgcac gcacggcgtt
    14041 tattctggag tgcaagaaag cgtcgccgtc aaaaggcgtg atccgtgatg atttcgatcc
    14101 ggcacgcatt gccgccattt ataaacatta cgcttcggca atttcggtgc tgactgatga
    14161 gaaatatttt caggggagct ttgatttcct ccccatcgtc agccaaatcg ccccgcagcc
    14221 gattttatgt aaagacttca ttatcgaccc ttaccagatc tatctggcgc gctattacca
    14281 ggccgatgcc tgcttattaa tgctttcagt actggatgac gaccaatatc gccagcttgc
    14341 agccgtcgct cacagtctgg agatgggggg gctgaccgaa gtcagtaatg aagaggaact
    14401 ggagcgcgcc attgcattag gggcaaaggt cgttggcatc aacaaccgcg atctgcgtga
    14461 tttgtcgatt gatctcaacc gtacccgcga gcttgcgccg aaactggggc acaacgtaac
    14521 ggtaatcagc gaatccggca tcaatactta cgctcaggtg cgcgagttaa gccacttcgc
    14581 taacggtttt ctgattggtt cggcgttgat ggcccatgac gatttgcacg ccgccgtgcg
    14641 ccgggtgttg ctgggtgaga ataaagtatg tggcctgacg cgtgggcaag atgctaaagc
    14701 agcttatgac gcgggcgcga tttacggtgg gttgattttt gtcgcgacat caccgcgttg
    14761 cgtcaacgtt gaacaggcgc aggaagtgat ggctgcggca ccgttgcagt atgttggcgt
    14821 gttccgcaat cacgatattg ccgatgtggt ggacaaagct aaggtgttat cgctggcggc
    14881 agtgcaactg catggtaatg aagatcagct gtatatcgat acgctgcgtg aagctctgcc
    14941 aacacatgtt gccatctgga aagcattaag cgtcggtgaa accctgcccg cccgcgagtt
    15001 tcagcacgtt gataaatatg ttttagacaa cggccagggt ggaagcgggc aacgttttga
    15061 ctggtcacta ttaaatggtc aatcgcttgg caacgttctg ctggcggggg gcttaggcgc
    15121 agataactgc gtggaagcgg cacaaaccgg ctgcgccgga cttgatttta attctgctgt
    15181 agagtcgcaa ccgggcatca aagacgcacg tcttttggcc tcggttttcc agacgctgcg
    15241 cgcatattaa ggaaaggaac aatgacaaca ttacttaacc cctattttgg tgagtttggc
    15301 ggcatgtacg tgccacaaat cctgatgcct gctctgcgcc agctggaaga agcttttgtc
    15361 agcgcgcaaa aagatcctga atttcaggct cagttcaacg acctgctgaa aaactatgcc
    15421 gggcgtccaa ccgcgctgac caaatgccag aacattacgg ctgggacgaa caccacgctg
    15481 tatctgaagc gcgaagattt gctgcacggc ggcgcgcata aaactaacca ggtgctcggt
    15541 caggctttac tggcgaagcg gatgggtaaa accgaaatca tcgccgaaac cggtgccggt
    15601 cagcatggcg tggcgtcggc ccttgccagc gccctgctcg gcctgaaatg ccgtatttat
    15661 atgggtgcca aagacgttga acgccagtcg cctaacgttt ttcgtatgcg cttaatgggt
    15721 gcggaagtga tcccggtaca tagcggttcc gcgacgctga aagatgcctg taacgaggcg
    15781 ctgcgcgact ggtccggcag ttatgaaacc gcgcactata tgctgggcac cgcagctggc
    15841 ccacatcctt atccgaccat tgtgtgtgag tttcagcgga tgattggcga agaaacgaaa
    15901 gcgcagattc tggaaagaga aggtcgcctg ccggatgccg ttatcgcctg tgttggcggc
    15961 ggttcgaatg ccatcggcat gtttgcagat ttcatcaacg aaaccaacgt cggcctgatt
    16021 ggtgtggagc cgggtggtca cggtatcgaa actggcgagc acggcgcacc gctaaaacat
    16081 ggtcgcgtgg gcatttattt cggtatgaaa gcgccgatga tgcaaaccga agacgggcag
    16141 attgaagaat cttactccat ctccgccgga ctggatttcc cgtctgtcgg cccacaacac
    16201 gcgtatctta acagcactgg acgcgctgat tacgtgtcta ttaccgatga tgaagccctt
    16261 gaagccttca aaacgctgtg cctgcacgaa gggattatcc cggcgctgga gtcttcccac
    16321 gccctggccc atgcgctgaa aatgatgcgc gaaaccccgg aaaaagagca gctactggtg
    16381 gttaaccttt ccggtcgcgg cgataaagac atcttcaccg ttcacgatat tttgaaagca
    16441 cgaggggaaa tctgatggaa cgctacgaat ctctgtttgc ccagttgaag gagcgcaaag
    16501 aaggcgcatt cgttcctttc gtcacgctca gggatccggg cattgagcag tcattgaaaa
    16561 ttatcgatac gctaattgaa gccggtgctg acgcgctgga gttaggtatc cccttctccg
    16621 acccactggc ggatggcccg accattcaaa acgccactct gcgcgccttt gcggcaggtg
    16681 tgactccggc acaatgtttt gaaatgctgg cactgattcg ccagaaacac ccgaccattc
    16741 ccattggcct gttgatgtat gccaatctgg tgtttaacaa aggcattgat gagttttatg
    16801 cccagtgcga gaaagtcggc gtcgattcgg tgctggttgc cgatgtgcca gttgaagagt
    16861 ccgcgccctt ccgccaggcc gcgttgcgcc ataatgtcgc acctatcttc atctgcccgc
    16921 caaatgccga tgacgacctg ctgcgccaga tagcctctta cggtcgtggt tacacctatt
    16981 tgctgtcacg agcgggcgtg accggcgcag aaaaacgcgc cgcgttaccc ctcaatcatc
    17041 tggttgcgaa gctgaaagag tacaacgctg cacctccatt gcaggggttt ggtatttccg
    17101 ccccggatca ggtaaaagca gcgattgatg caggagctgc gggcgcgatt tctggttcgg
    17161 ccattgttaa aatcatcgag caacatatta atgagccaga gaaaatgctg gcggcactga
    17221 aagtttttgt acaaccgatg aaagcggcga cgcgcagtta atcccacagc cgccagttcc
    17281 gttggcggca ttttaacttt ctttaatgaa gccggaaaaa tcctaaattc atttaatatt
    17341 tatcttttta ccgcttcgct tacccctgtc gaacgtcaac ttacgtcatt tttccgccca
    17401 acagtaatat aatcaaacaa attaatcccg caacataaca ccagtaaaat caataatttt
    17461 ctctaagtca cttattcctc aga
//
LOCUS       DADMJE010000083        17364 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.084, whole genome shotgun sequence.
ACCESSION   DADMJE010000083 DADMJE010000000
VERSION     DADMJE010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17364
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.084"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(254..535)
                     /locus_tag="JN001_002458"
     CDS             complement(254..535)
                     /locus_tag="JN001_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehE family protein"
                     /protein_id="HAY9053659.1"
                     /translation="MNKYWLSGIIFLAYGLASPAFSSETATLAINGRISPPTCSMAMV
                     NGQPQQHCGQLTYNVDTRHLFSSPVKGVTTEVVVAGSDSKRRIVLNRYD"
     gene            complement(798..1907)
                     /gene="apbC"
                     /locus_tag="JN001_002459"
     CDS             complement(798..1907)
                     /gene="apbC"
                     /locus_tag="JN001_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310946.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster carrier protein ApbC"
                     /protein_id="HAY9053660.1"
                     /translation="MNEQSQAKSPEALRAMVAGTLANFQHPTLKHNLTTLKALHHVAW
                     MDDTLHVELVMPFVWHSAFEELKEQCSAELLRITGAKAIDWKLSHNIATLKRVKNQPG
                     INGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQ
                     RPTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDY
                     LVLDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVE
                     NMSVHICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLHISLREDLDKGTPTVISRP
                     ESEFTAIYRQLADRVAAQLYWQGEVIPGEISFRAV"
     gene            2039..4072
                     /gene="metG"
                     /locus_tag="JN001_002460"
     CDS             2039..4072
                     /gene="metG"
                     /locus_tag="JN001_002460"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HAY9053661.1"
                     /translation="MTQVAKKILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGH
                     EVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFAGFNISYDNYHSTHSEE
                     NRQLSELIYSRLKENGFIKNRTISQLYDPEKGMFLPDRFVKGTCPKCKSPDQYGDNCE
                     VCGATYSPTELIEPKSVVSGATPVMRDSEHFFFDLPSFSEMLQAWTRSGALQEQVANK
                     MQEWFESGLQQWDISRDAPYFGFEIPNAPGKYFYVWLDAPIGYMGSFKNLCDKRGDSV
                     SFDEYWKKDSTAELYHFIGKDIVYFHSLFWPAMLEGSNFRKPSNLFVHGYVTVNGAKM
                     SKSRGTFIKASTWLNHFDADSLRYYYTAKLSSRIDDIDLNLEDFVQRVNADIVNKVVN
                     LASRNAGFINKRFDGVLASELADPQLYKTFTDAAEVIGEAWESREFGKAVREIMALAD
                     LANRYVDEQAPWVVAKQEGRDADLQAICSMGINLFRVLMTYLKPVLPKLTERAEAFLN
                     TELTWDGIQQPLLGHKVNPFKALYNRIDMRQVEALVEASKEEVKAAAAPVTGPLADDP
                     IQETITFDDFAKVDLRVALIENAEFVEGSDKLLRLTLDLGGEKRNVFSGIRSAYPDPQ
                     ALIGRHTIMVANLAPRKMRFGISEGMVMAAGPGGKDIFLLSPDAGAKPGHQVK"
     gene            4213..8007
                     /locus_tag="JN001_002461"
                     /pseudo
     CDS             4213..8007
                     /locus_tag="JN001_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001215568.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="WGR and DUF4132 domain-containing protein"
     gene            8017..11649
                     /locus_tag="JN001_002462"
     CDS             8017..11649
                     /locus_tag="JN001_002462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4132 domain-containing protein"
                     /protein_id="HAY9053662.1"
                     /translation="MDKELPWLADNAQLELKYKKGKTPLSHRRWPGEPVSVITGSLIQ
                     TLGDELLQKAEKKKNIVWRYENFSLEWQSAITQAINLIGEHKPSIPARTMAALACIAQ
                     NDSQQLLDEIVQQEGLEYATEVVIARQFIARCYESDPLVVTLQYQDEDYGYGYRSETY
                     NEFDLRLRKHLSLAEESCWQRCADKLIAALPGITKVRRPFIALILPEKPEIANELVGL
                     ECPRTHFHSKEWLKVVANDPTAVRKLEHYWSQDIFSDREASYMSHENHFGYAACAALL
                     REQGLAAIPRLAMYAHKEDCGSLLVQINHPQVIRTLLLVADKNKPSLQRVAKYHKNFP
                     HATLAALAELLALKEPPARPGNPIIEDKKLPAQQKARDEYWRTLLQTLMASQPQLAEE
                     VMQWLSTQPQSVLKSYLSAPPKPVIDGTDNSNLPEILVSPPWRSKKKMTAPRLDLAPL
                     ELTPQVYWQPGEQERLAATEPARYFSTESLAQRMEQKSGRVVLQELGFGDDVWLFLNY
                     ILPGKLDAARNSLIVQWHYYQGRVEEILNGWNSPEAQLAEQALRSGHIEALINIWEND
                     NYSRYRPEKSVWNLYLLAQLPREMALTFWLRINEKKHLFAGEDYFLSILGLDALPGLL
                     LAFSHRPKETFPLILNFGATELALPVARVWHRFAGQRNLARQWILQWPEHTATALIPL
                     VFVKPCDNSEAALFALRLLYEQGHSELLQTVANRWDRADMWPALEKILTQNPMEIYPA
                     RIPKAPDFWHPQMWSRPRLITNNQTVTNDALEIIGEMLRFTQGGRFYSGLEQLKTFCQ
                     PQTLAAFAWDLFTAWQQAGAPAKDNWAFLALSLFGDESTARDLTTQILAWPQEGKSAR
                     AVSGLNILTLMNNDMALIQLHHISQRAKSRPLRDNAAEFLQVVAENRGLSQEELADRL
                     VPTLGLDDPQALSFDFGPRQFTVRFDENLNPVIFDQQNVRQKSVPRLRADDDQLKAPE
                     ALARLKGLKKDATQVSKNLLPRLETALRTTRRWSLADFHSLFVNHPFTRLVTQRLIWG
                     VYPANEPRCLLKAFRVAAEGEFCNAQDEPIDLPADALIGIAHPLEMTAEMRSEFAQLF
                     ADYEIMPPFRQLSRRTVLLTPDESTSNSLTRWEGKSATVGQLMGMRYKGWESGYEDAF
                     VYNLGEYRLVLKFSPGFNHYNVDSKALMSFRSLRVYRDNKSVTFAELDVFDLSEALSA
                     PDVIFH"
     gene            11710..12027
                     /locus_tag="JN001_002463"
     CDS             11710..12027
                     /locus_tag="JN001_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053663.1"
                     /translation="MIVQKELVAIYDYEVPVPEDPFSFRLEIHKCSELFTGSVYRLER
                     FRLRPTFHQRDREDADPLINDALIYIRDECIDERKLRGESPETVIAIFNRELQNIFNQ
                     EIE"
     gene            12334..13422
                     /locus_tag="JN001_002464"
     CDS             12334..13422
                     /locus_tag="JN001_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416623.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HAY9053664.1"
                     /translation="MSPQNNHLQRPPAAVLYADELAKLKQNDNAPCPPGWQLSLPAAR
                     AFILGDEAQNISRKVVISPSAVERMLVTLATGRGLMLVGEPGTAKSLLSELLATAISG
                     DAGLTIQGGASTTEDQIKYGWNYALLINHGPSTEALVPAPLYQGMRDGKIVRFEEITR
                     TPLEVQDCLLGMLSDRVMTVPELTGEASQLYAREGFNIIATANTRDRGVNEMSAALKR
                     RFDFETVFPIMDFAQELELVASASARLLAHSGIPHKVPDAVLELLVRTFRDLRANGEK
                     KTSMDTLTAIMSTAEAVNVAHAVGVRAWFLANRAGEPADLVECIAGTIVKDNEEDRAR
                     LRRYFEQRVATHKEAHWQAYYQARHRLP"
     gene            13433..15712
                     /locus_tag="JN001_002465"
     CDS             13433..15712
                     /locus_tag="JN001_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053665.1"
                     /translation="MSEPLIVGIRHHSPACARLVKSLIESQRPRYVLIEGPADFNDRV
                     DELFLAHQLPVAIYSYCQYQDGAAPGRGAWTPFAEFSPEWQALQAARRIQAQTYFIDL
                     PCWAQSEEEDDSPDTQDESQALLLRATRMDNSDTLWDHLFEDESQQTALPSALAHYFA
                     QLRGDASGDALNRQREAFMARWIGWAMQQNNGDVLVVCGGWHAPALAKMWRECPQKIN
                     KPELPSLADAVTGCYLTPYSEKRLDVLAGYLSGMPAPVWQNWCWQWGLQKAGEQLLKT
                     ILTRLRQHKLPASTADMAAAHLHAMALAQLRGHTLPLRTDWLDAIAGSLIKEALNAPL
                     PWSYRGVIHPDTDPILLTLIDTLAGDGFGKLAPSTPQPPLPKDVTCELERTAISLPAE
                     LTLNRFTPDGLTQSQVLHRLAILEIPGIVRQQGSTLTLAGNGEERWKLTRPLSQHAAL
                     IEAACFGATLQEAARNKLEADMLDAGGIGSITTCLSQAALAGLASFSQQLLEQLTLLI
                     AQENQFAEMGQALEVLYALWRLDEISGMQGAQILQTTLCATIDRTLWLCESNGRPDEK
                     EFHAHLHSWQALCHILRDLHSGVNLPGVSLSAAVALLERRSQAIHAPALDRGAALGAL
                     MRLEHPNASAEAALTMLAQLSPAQSGEALHGLLALARHQLACQPAFIAGFSSHLNQLS
                     EADFINALPDLRAAMAWLPPRERGTLAHQVLEHYQLAQLPVSALQMPLHCPPQAIAHH
                     QQLEQQALASLQNWGVFHV"
     gene            15705..16841
                     /locus_tag="JN001_002466"
     CDS             15705..16841
                     /locus_tag="JN001_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HAY9053666.1"
                     /translation="MSELNDLLTTRELQRWRLILGEAAETTLCGLDDNARQIDHALEW
                     LYGRDPERLQRGERSGGLGGSNLTTPEWINSIHTLFPQQVIERLESDAVLRYGIEDVV
                     TNLDVLERMQPSESLLRAVLHTKHLMNPEVLAAARRIVCQVVEEIMARLAKEVRQAFS
                     GVRDRRRRSFIPLARNFDFKSTLRANLQHWHPQHGKLYIESPRFNSRIKRQSEQWQLV
                     LLVDQSGSMVDSVIPSAVMAACLWQLPGIRTHLVAFDTSVVDLTADVADPVELLMKVQ
                     LGGGTNIASAVEYGRQLIEQPAKSVIILVSDFYEGGSSSLLTHQVKKCVQSGIKVLGL
                     AALDSTATPCYDRDTAQALVNVGAQIAAMTPGELASWLAENLQS"
     gene            16838..>17364
                     /locus_tag="JN001_002467"
     CDS             16838..>17364
                     /locus_tag="JN001_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053667.1"
                     /translation="MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHEN
                     GALIATFSDGVRTQLANGQALKEAQCSCGASGMCRHRVMLVLSYQRLCATAQPTGKEE
                     EWDPAIWLEELATLPDATRKRAQALVAKGITIELFCAPGEIPSARLPMSDVRFYSRSS
                     IRFARCDCIEGTLCE"
BASE COUNT         4393 a         4474 c         4392 g         4105 t
ORIGIN      
        1 gtctgtatct cttggaaaca aatttctcac atcaaaaaag ttgccgcaat gtaaacacat
       61 tgttttattg atttaaaaca aattaaccat tgcaatataa atacaaaaaa tatttaagag
      121 tattaactat ttatcgcatc tatcaattaa tgtagattta tgtaaatggt attgttgata
      181 tcaataaaaa agccgaaatc atttatataa atgatttcgg ctttctaaat gcaattaaaa
      241 tcaggttgcc aaattaatcg tagcgattta acacgattcg acgtttgcta tcgctacctg
      301 caacaaccac ttctgtcgtt acacctttga cgggcgaaga aaacagatga cgggtgtcaa
      361 cattatacgt taactgacca caatgctgtt gaggttgacc attaaccata gccatactgc
      421 atgttggggg actgatcctg ccattaatcg ctaatgtggc agtctctgaa gagaatgcgg
      481 gagaagccaa tccataggca agaaaaataa ttcctgacag ccaatactta ttcattgaac
      541 gttatccctg tagtaaaggt tatgcctgga tagaatgagt gcataacaaa ctatagctgt
      601 acatccacta cacagccacg aaggatgata atgaagcatt gcctgtatga tcaatcgact
      661 ttgtagagtt tcggacgaag gtccgcagaa tattcgcagt attaaataag tgttcattaa
      721 tgcggcaaaa actaatacac cgcatcaatg taacatctct gcggtgtatg aagaataacc
      781 agaatggtta ataggcgtta gaccgcgcgg aaggaaatct cgcctggaat gacttcaccc
      841 tgccagtaga gctgagctgc aacgcggtca gccagctggc ggtagatagc ggtaaattcg
      901 ctctccggac ggctgataac cgttggcgta cctttatcga gatcctcacg taaggagatg
      961 tgtaacggca tctgccccag cagctgtgta tggtattttt cagccagttt ctctgcacca
     1021 ccggtaccga aaatcggttc atggtgacca cagttactgc aaatatgcac actcatgttc
     1081 tcgacaatac cgagcaccgg aacctcgact ttctcgaaca tcacaatgcc ttttttcgca
     1141 tcgatcagcg cgatgtcctg cggggtggtg accacgactg caccggttac tggaatgttt
     1201 tgcgccagcg tcaattgaat gtcaccggtg cctggcggca tatcaagcac cagatagtcg
     1261 agatccggcc acaaggtttc ctgcaacatc tgcattaacg ccttgctcgc catcggtcca
     1321 cgccacacca tcgcattgtc gtcagtgacc agataaccaa ttgaattggt tgccaggcca
     1381 tgagacataa tcggtgccat atgggtaccg tccggcgaag ttggacgctg attttctgcg
     1441 cccaacattg ttgggattga tgggccgtag atatcggcgt ccagaatgcc gactttcgcc
     1501 ccttctgccg ccagcgccag tgccaggttt accgccgtgg acgatttacc cacgccgcct
     1561 ttaccggaac tcaccgcgat aatgttcttc acaccgttaa ttcccggctg attcttcacg
     1621 cgtttcagag tggctatgtt atgcgacagt ttccagtcga tagctttcgc cccggtgatg
     1681 cgcagcagtt cggcgctaca ttgctctttt aactcttcga acgcactatg ccagacaaac
     1741 ggcataacca gttccacatg caacgtgtcg tccatccagg cgacatggtg caacgctttc
     1801 agcgtggtga ggttatgctt cagggttggg tgctgaaaat tggccagtgt cccggcgacc
     1861 attgcgcgca aggcttctgg tgatttggcc tgggattgtt cgttcatccc gactcctttt
     1921 ttgtatagat aaaccatcag ttgatagttt acctgaagaa tatagagaag tacttactta
     1981 acattttccc atttggtact atctaacccc ttttcactat taagaagtaa tgcctactat
     2041 gactcaagtc gcgaagaaaa ttctggtgac gtgcgcactg ccgtacgcta acggctcaat
     2101 ccacctcggc catatgctgg agcacatcca ggctgatgtc tgggtccgtt accagcgaat
     2161 gcgcggccac gaggtcaact tcatctgcgc cgacgatgcc cacggtacac cgatcatgct
     2221 gaaagctcag cagcttggta tcaccccgga gcagatgatt ggcgaaatga gtcaggagca
     2281 tcagactgat ttcgcaggct ttaacatcag ctatgacaac tatcactcga cgcacagcga
     2341 agagaaccgc cagttgtcag aacttatcta ctctcgcctg aaagaaaacg gttttattaa
     2401 aaaccgcacc atctctcagc tgtacgatcc ggaaaaaggc atgttcctgc cggaccgttt
     2461 tgtgaaaggc acctgcccga aatgtaaatc cccggatcaa tacggcgata actgcgaagt
     2521 ctgcggcgcg acctacagcc cgactgaact gatcgagccg aaatcggtgg tttctggcgc
     2581 tacgccggta atgcgtgatt ctgaacactt cttctttgat ctgccctctt tcagcgaaat
     2641 gttgcaggca tggacccgca gcggtgcgtt gcaggagcag gtggcaaata aaatgcagga
     2701 gtggtttgaa tctggcctgc aacagtggga tatctcccgc gacgcccctt acttcggttt
     2761 tgaaattccg aacgcgccgg gcaaatattt ctacgtctgg ctggacgcac cgattggcta
     2821 catgggttct ttcaagaatc tgtgcgacaa gcgcggcgac agcgtaagct tcgatgaata
     2881 ctggaagaaa gactccaccg ccgagctgta ccacttcatc ggtaaagata ttgtttactt
     2941 ccacagcctg ttctggcctg ccatgctgga aggcagcaac ttccgcaagc cgtccaacct
     3001 gtttgttcat ggctatgtga cggtgaacgg cgcaaagatg tccaagtctc gcggcacctt
     3061 tattaaagcc agcacctggc tgaatcattt tgacgcagac agcctgcgtt actactacac
     3121 tgcgaaactc tcttcgcgca ttgatgatat cgatctcaac ctggaagatt tcgttcagcg
     3181 tgtgaatgcc gatatcgtta acaaagtggt taacctggcc tcccgtaatg cgggctttat
     3241 caacaagcgt tttgacggcg tgctggcaag cgaactggct gacccgcagt tgtacaaaac
     3301 cttcactgat gccgctgaag tgattggtga agcgtgggaa agccgtgaat ttggtaaagc
     3361 cgtgcgcgaa atcatggcgc tggctgatct ggctaaccgc tatgtcgatg aacaggctcc
     3421 gtgggtggtg gcgaaacagg aaggccgcga tgccgacctg caggcaattt gctcaatggg
     3481 catcaacctg ttccgcgtgc tgatgactta cctgaagccg gtactgccga aactgaccga
     3541 gcgtgcagaa gcattcctca atacggaact gacctgggat ggtatccagc aaccgctgct
     3601 gggccacaaa gtgaatccgt tcaaggcgct gtataaccgc atcgatatga ggcaggttga
     3661 agcactggtg gaagcctcta aagaagaagt aaaagccgct gccgcgccgg taactggccc
     3721 gctggcagat gatccgattc aggaaaccat cacctttgac gacttcgcta aagttgacct
     3781 gcgcgtggcg ctgattgaaa acgcagagtt tgttgaaggt tctgacaaac tgctgcgcct
     3841 gacgctggat ctcggcggtg aaaaacgcaa tgtcttctcc ggtattcgtt ctgcttaccc
     3901 ggatccgcag gcactgattg gtcgtcacac cattatggtg gctaacctgg caccacgtaa
     3961 aatgcgcttc ggtatctctg aaggcatggt gatggctgcc ggtcctggcg ggaaagatat
     4021 tttcctgcta agcccggatg ccggtgctaa accgggtcat caggtgaaat aatccccctt
     4081 caaggcgctg catcgacagc gccttttctt tataaattcc taaagttgtt ttcttgcgat
     4141 tttgtctctc tctaacccgc ataaatactg gtagcatctg cattcaactg gataaaatta
     4201 cagggatgca gaatgagaca ctttatctat caggacgaaa aatcacataa attcagggca
     4261 gttgagcaac agggaaacga gttgcatatc agttggggaa aagttggcac caaagggcaa
     4321 agccagataa aaagtttttc agatgctgcg gcagcggcaa aagcggagct taagctgatt
     4381 gcggagaagg tgaagaaggg gtatgtggag caagcgaagg ataattcttt gcaaccttcc
     4441 caaacggtaa cgggctctct caaggtagcg gacttatcca ccattattca ggaacaaccc
     4501 tctttcgtag cagaaacccg tgcgcctgac aaaaatacag atgctgtttt accgtggctg
     4561 gcgaaagata ttgctgtcgt ttttccgccc gaagttgtac acaccacgtt aagtcatcgc
     4621 cgctttcccg gagttcctgt tcagcaagca gacaaattgc cccaattacg tcgcttagcc
     4681 tgtagtgtgt cgcaacggga taataaaaca gccacatttg acttcagcgc ctgttcttta
     4741 gaatggcaaa acaccgtcgc ccaggcgatc agtcagatcg acggcctgaa aacaacacag
     4801 ttaccatcac cagtaatggc tgtactcacg gcacttgaaa tgaaatgcac aagatataaa
     4861 gtgcgtgagg atgttatgga tcagatcgtc caggaaggcg gtctggaata tgctactgat
     4921 gtaataatac accttcaaca gattgatatt gaatgggatt atgcgaataa tgtcattatt
     4981 attctgccgt ctggcattgc acctagctac ttggagcaat attccagatt tgaatgacgc
     5041 ctacgtaaac atttatcact gacggaagag tctctctggc aaaaatgtgc acaaaaactt
     5101 attgccgcaa ttccacatat tccagaatgg cggcaaccat taattgcttt gttattaccc
     5161 gaaaaaccag aaattgcaca tgaaattgcc cagcgtctac tggggcaaaa aaaattaccc
     5221 tcgcttgagt ggttaaaaat agtggcgact gatgagcaca ttcttgcctc attagaaaaa
     5281 tatcacgaac catatgccat ttttgatgat tactattgtg gtgcgatatg gtcagccacc
     5341 gtattacagg agcaaggtgt tgcagccctg ccccgatttg ctccctatgc cgcaagtgac
     5401 tactgcgccg atgtgttgcg tcatatcaat catccgttcg cattgacact gcttatacgt
     5461 gtagccgggc aaactaaacg ctgtcacgat cggatgacga aagccattgc tgcgttccca
     5521 catgcagcaa tggcggcact gacggaactt cttgggcaaa aagaagagaa cagttggcgc
     5581 attatgctaa tgacaatgct tatctcacaa ccagcactgg cagaacaggt cattccctgg
     5641 ctctcgacac ccgcagttgc cgtactgaaa tcatgccagc aacaactgac acagccctca
     5701 aaccatgcca gcgccgatct actgccagcc gtagtagtct cccctccctg gctttcgaaa
     5761 aagaaaaaat cgccgattcc ggtgctggat ttagcgccat taggcattga gccaatctgt
     5821 tatctgacag aagaaatcag taatcaactt ttggcgaaat atatctggta ttcaaaacac
     5881 atcacggtta gccatgaaga aagtactacc aacctgttgg caaggatggg ttttcaacga
     5941 cggatcgctg gtacatatat taaagctccc gaagcggtag ttgaggcatg gctaaatgaa
     6001 gattattcaa ccttactaag tgaatttaag gtgtttcatt cacctaccgg gcattattgg
     6061 cagttgggga ttttgacaac attgccgctg gagaaagcag taaaagcatg gaatgccctt
     6121 accctatctc cacataccga taccgaatac tccatgttac attttggact caaagggtta
     6181 cctgggttag taaactcact tgcacgctat ccacaagaag ccttgcccat cacgaattac
     6241 ttcgcagcga gtgagctggc tcctgccgtc gcccgtgcct tcaacaaact gaaaacgcta
     6301 cgcgaaaacg cccgtagctg gctgttgaaa tacccggaac atgcccttac cggcctgctg
     6361 cctgcggcgc tcggcaaagc cggtgaagca caggataacg cccgcgctgc cttgcgtatg
     6421 cttaccgaaa acggtcatca gccattactg caagaaatcg cccgacgtta taaccagccg
     6481 gaagtaaccg atgcggtgaa cgctctgctt gcgctcgatc ccttagataa tcacccgaca
     6541 aaaatcccca ctcttccggc cttttatcag ccatcgctct ggacgcgccc ggtattaaaa
     6601 gcaaatgccc aatcactgcc agatagcgcc ctcctccacc tcggtgaaat gctccgcttc
     6661 cctcaggaag aggctctgta tccgggatta ttgcaggtga aagacgtctg ttccgccgac
     6721 tcactggcgg gatttgcctg ggatctgttt accgcctggc agaccgctgg cgcgccgtcg
     6781 aaagagagtt gggcgttcac tgcgttaggc gttctcggta acgatgacac cgcccgcaaa
     6841 ctgacgccat taatacgcgc ctggcctggt gaatcccagc ataaacgcgc caccgttggg
     6901 ttggatattc tcgctgctat cggtagtgat atcgccctta tgcagcttaa cggcatcgcc
     6961 cagaaactga aattcaaagc attacaggag cgggcaaaag aaaaaattgc cgacattgcc
     7021 gagagccgcg aactcacggt ggcggagctt gaagatcggt tagcaccgga tctcggtctg
     7081 gatgataacg gttcgctgct gctggatttt ggcccacggc agttcaccgt cagctttgat
     7141 gaaaccttaa aaccgtttgt gcgtgatgtt tccggcagcc gcctgaaaga cctgcccaaa
     7201 ccgaacaaaa gcgatgatga aacgcgggcg aacgatgcgg ttaaccgcta caaattgctg
     7261 aaaaaagatg cgcgtaccat cgccgcccag caggtagcaa ggctggaatc cgccatgtgc
     7321 ctgcgccgcc gctggtcgct ggaaaacttc cagctcttcc tggttgagca tccgctggtt
     7381 cgtcacttaa cccgccgtct gatttggggc gtttatagcg ccgaaaacca gctactggct
     7441 tgctttcgcg tagcagaaga taacagctcc agcaccgctg acgatgatct tttcaccctg
     7501 ccggaaggcg atatctctat cggcactcct cacgttctgg aaatatcacc aacggatgct
     7561 gccgcctttg gtcagctttt tgccgactac gaactgctac caccgttccg ccagctcgac
     7621 cgtaacagct acgccctgac agaagccgag cgcaatgcca gtgaactgac ccgctgggca
     7681 ggcagaaaat gcccgagtgg tcgggtcatg gggctggcga ataaaggctg gataaagggc
     7741 gaaccacagg atggaggctg gatcggatgg atgatcaaac ctttgggtcg ctggtcgtta
     7801 atcatggaaa tcgatgaagg ctttgcggta ggcatgtcgc cagccgaact cagcgctgag
     7861 cagctcttaa gcaagctgtg gctatgggaa ggcaaagcag aaagatatgg ctgggggagt
     7921 aattcaacac aggaagcgca gttctccgta atcgatgcca tcaccgccag cgagctaatt
     7981 aacgatattg aagccctgtt tgaataagga aagagcatgg acaaggaatt accgtggctg
     8041 gcggataacg cccaactgga actgaaatat aaaaaaggca aaacgccgct cagtcatcgt
     8101 cgctggccgg gcgaaccagt gtccgttatc actggaagtc tcatccagac attgggtgat
     8161 gaattgctac aaaaagctga gaagaaaaaa aacattgtct ggcgttatga gaatttttca
     8221 ctggagtggc agtccgccat cacgcaggcc atcaacttga tcggcgaaca caaaccctca
     8281 atcccggccc ggacaatggc ggcgctagcc tgtatcgcgc aaaatgacag ccaacagttg
     8341 ctcgacgaaa tcgtccaaca agaggggctg gaatatgcga ctgaggtggt gattgcacgc
     8401 cagtttattg cgcggtgtta tgagagtgat cctctggtag tgacattgca gtatcaggac
     8461 gaggattatg gctatggtta tcgctcagaa acctataacg aattcgatct ccgactgcgt
     8521 aagcatctct ctctggcaga ggaaagctgc tggcagcgtt gcgccgacaa actcattgcc
     8581 gcactaccag gaataaccaa agttcgccgc ccttttattg cgctgatcct cccggaaaaa
     8641 ccagaaatag ccaatgagtt ggtaggcctt gaatgcccgc gaactcattt tcattctaag
     8701 gagtggttaa aagttgttgc taatgacccc acagcggtga gaaaactcga acactactgg
     8761 agccaggata tatttagcga tcgagaagcc agctacatgt cgcatgaaaa ccacttcggc
     8821 tacgcggcct gcgccgccct tttgcgcgaa caaggactgg cagccattcc gcgcctcgcg
     8881 atgtatgccc ataaagaaga ttgcggcagt ctgctggtac aaattaacca tccgcaagtc
     8941 atccgcacct tgctactggt ggctgataaa aacaaaccca gcctgcaacg tgtagctaaa
     9001 taccataaaa acttccccca tgcgacgctc gccgcactgg cagaactgct ggcgttaaaa
     9061 gaaccaccag cccgcccagg taatccaatc atcgaagaca aaaagctgcc tgcacagcaa
     9121 aaagcacgcg atgaatactg gcgtacgctg ttacaaacgc tgatggcatc gcagccacaa
     9181 ctggcagaag aggtgatgca gtggttaagt actcaacccc agtcagtgct gaagagttat
     9241 ttatcggcac cgcccaaacc ggttattgat ggcaccgata acagcaatct gccagaaatc
     9301 ctcgtttcac caccgtggcg tagtaagaaa aaaatgacag ctccacgtct tgatttggca
     9361 ccgctcgaat taactccgca agtttactgg caaccaggcg aacaagagag gcttgccgcc
     9421 actgagcctg cccgttattt cagcacggaa tctcttgcgc aacgcatgga acaaaaaagt
     9481 ggacgagttg tattacagga actgggtttt ggggatgatg tatggctgtt tctgaattat
     9541 atactccccg gaaaactgga tgctgcacgc aattcactca ttgttcagtg gcattactac
     9601 caggggcggg ttgaagagat cctgaatggc tggaactccc cggaagcaca attagcagaa
     9661 caggcgctcc gcagcggtca catagaagcg ttaattaaca tatgggaaaa tgacaactac
     9721 tcacgttatc gtccggaaaa gagtgtctgg aacctgtatt tattggcaca gttgccgcgt
     9781 gagatggctt tgaccttctg gctgcgtatc aatgagaaaa agcatctgtt cgcgggtgag
     9841 gactattttc tcagtatcct cggattggat gcgctaccag gtctgctgtt ggctttttca
     9901 catcgtccaa aagaaacatt tccgttaatt ttaaatttcg gcgcaacaga actggccctg
     9961 cccgttgccc gcgtctggca ccgttttgcg ggccagcgta atctggctcg ccagtggatt
    10021 ttacaatggc cggaacatac ggctactgca cttattccac tcgtctttgt taaaccctgc
    10081 gacaacagcg aagcggcatt atttgccctt cgtttactgt atgaacaagg acatagtgaa
    10141 ttactgcaaa cggttgcaaa ccgctgggat cgcgctgata tgtggccagc cctggaaaaa
    10201 atacttaccc agaacccgat ggaaatttac ccggcacgca ttccaaaagc ccctgatttc
    10261 tggcatccgc aaatgtggtc caggccgcgc cttatcacta ataatcaaac tgttaccaat
    10321 gacgctctgg aaattatcgg cgaaatgctg cgctttaccc aggggggacg tttttatagc
    10381 gggctggaac aactgaaaac gttctgccag ccacaaacgc tggcagcttt tgcttgggat
    10441 ctcttcactg cgtggcaaca agctggtgcc cccgcaaaag acaactgggc atttctggcg
    10501 ttaagtctct ttggtgacga aagcacggca cgggatctga cgacacagat cctcgcctgg
    10561 ccacaagaag gcaaatctgc ccgtgctgtc agcggcctga acatccttac cctgatgaat
    10621 aatgatatgg cgctgataca gctgcatcat atatcgcaac gggctaaatc ccgcccctta
    10681 cgtgataacg cggcggaatt tcttcaggtg gtcgcagaaa atcgcgggct aagccaggaa
    10741 gagctagcgg acagattagt cccaaccctg ggccttgatg atccgcaggc gttgagtttt
    10801 gattttggtc cccggcagtt taccgttcgc ttcgatgaaa atctcaaccc ggttatcttt
    10861 gatcagcaaa acgttcgcca gaaaagcgtt ccccgtttgc gcgccgatga cgatcaactg
    10921 aaagcgcccg aggcactggc ccgactaaaa gggctaaaaa aagatgctac tcaggtgagc
    10981 aaaaacctgc tcccgcgtct tgaaacggcc ctacgtacca cccgacgctg gtcgctggca
    11041 gattttcatt ctctgtttgt taatcatccc tttacccgtc tggttaccca gcgattaata
    11101 tggggggttt atccggcaaa tgaaccgcgt tgtttactca aagcctttcg tgtggccgca
    11161 gagggggagt tctgcaatgc gcaagatgag ccaattgacc tgcctgcgga cgctctgatt
    11221 ggcattgccc acccgttaga aatgacagca gaaatgcgca gtgaatttgc acagcttttt
    11281 gccgattacg aaattatgcc gccttttcgc cagttgtcgc gccgcacggt gctgctcaca
    11341 cctgacgagt caaccagtaa cagcctgact cgctgggaag gtaaatccgc taccgttggg
    11401 caacttatgg gaatgcgata caaaggctgg gagtcaggct atgaggacgc atttgtctat
    11461 aacctgggtg agtaccggct ggtccttaag ttttcacccg gttttaacca ctacaatgtt
    11521 gatagcaaag cgctaatgag cttccgttct cttcgagtgt accgtgacaa taaatccgtc
    11581 acttttgccg aacttgatgt gtttgatttg agtgaggcgt taagcgcacc tgacgtcatt
    11641 ttccattaaa acacagcggg cagtgatgca actgcccgtt atcaacacga cttaccagcg
    11701 gggaaagcga tgatcgtgca aaaagagctg gttgctattt acgattatga ggtccctgta
    11761 cctgaagatc cgttttcctt cagacttgag atccataaat gctctgaatt atttacaggt
    11821 tccgtctatc gactggagcg attccggcta cgtccaacat ttcatcaacg tgatcgagaa
    11881 gatgctgacc cgctaataaa tgatgcgttg atttatataa gagatgagtg tattgatgag
    11941 cggaaattac gaggtgaatc acctgaaact gtaatagcaa tttttaatcg tgaactacag
    12001 aatatattca accaagaaat agaataatat actctaaata attcaaattg gtccgatccg
    12061 gcgcaacgtc ccaatggcct ggattataaa tctcattatc ttaattgcaa cggggtccag
    12121 ccgtggttat aattcgttcg ttggaacacg atgttgcaca ggctgtggtg ttaggcctga
    12181 aaatagtaaa taaaagaacc tgcctcacca gcaggttttt ttatttactg tgatctgctt
    12241 tccagatatt tttcgctcaa acaactaatg cgccaaacat ttattgcgcg taaaatatcg
    12301 tttatttcat taatacattt cagggatgaa tatatgtcac cgcagaataa tcatctgcag
    12361 cgtccgcctg ctgctgtgtt atacgccgat gaactggcaa aattaaaaca aaatgataac
    12421 gcaccttgcc cgcccggttg gcagttaagt ttgcctgcgg cccgtgcttt tatccttggc
    12481 gacgaagcgc aaaatatcag ccgtaaagtg gtgattagcc cctccgctgt cgaacgtatg
    12541 ttagtcactc ttgctaccgg ccgcggtttg atgttggtgg gggaaccggg taccgcaaaa
    12601 tctcttcttt ctgaattact ggcaaccgct attagcggcg atgccgggtt aaccatccag
    12661 ggcggggcat ctaccaccga agatcaaatc aagtatggct ggaactacgc cctgcttatc
    12721 aatcatggtc cgtcaacgga agcgctggtc cctgccccgc tttatcaggg aatgcgcgac
    12781 ggcaaaatcg tccgtttcga agagataacg cgtacaccgc tggaagtgca ggactgtctg
    12841 ttaggtatgc tttctgacag ggtgatgacg gtgccggaac tcactggtga agccagtcag
    12901 ctctatgcgc gagaaggctt taatattatt gccactgcca atacccgcga tcgcggcgtc
    12961 aatgaaatga gtgctgcgct aaagcgtcgc ttcgattttg aaacggtttt tccgattatg
    13021 gatttcgccc aggagttgga actggtcgcc agtgcttcgg cgcgtttgct ggcccatagc
    13081 ggtattccgc ataaagtgcc tgacgcggta ctggaattac tggtccgcac cttccgcgat
    13141 ctgcgtgcca acggcgaaaa gaaaacgtca atggatacac tgacagcgat tatgtccacc
    13201 gctgaagccg tgaacgtggc ccatgctgtg ggcgtccgcg cctggttttt agcgaatcgc
    13261 gcgggggagc ctgccgacct ggtggaatgt attgccggaa ccatcgtcaa agataacgaa
    13321 gaagatcgcg cgcgtctgcg ccgttacttc gaacagcgtg tcgccacaca taaagaagct
    13381 cactggcagg cttattatca agcccgccac cgcctgccgt gaggaaagat gcatgagcga
    13441 gccgttaatt gtcggcatcc ggcatcatag tccggcctgc gcccggctgg tgaaatcgtt
    13501 aatcgaaagc cagcggccac gatacgtgtt gattgaaggc ccggctgatt ttaatgaccg
    13561 ggtagacgaa ctgtttttag cccaccagct tccggtagct atttacagtt attgccagta
    13621 tcaggacggt gcagcccccg ggcgtggtgc ctggacgcca tttgctgaat tttcgccgga
    13681 gtggcaggcg ctacaagccg cacgtcgcat tcaggcacaa acttacttca tcgatttgcc
    13741 ttgctgggcg cagagtgaag aagaggacga ttcgcctgat acgcaagatg aaagccaggc
    13801 cttactgctg cgtgccaccc gcatggataa cagcgatacc ctgtgggatc acttgttcga
    13861 agatgaaagc cagcaaactg cattaccctc tgcgctggcg cactattttg cccaactgcg
    13921 gggcgacgcc tccggcgatg cgctcaatcg tcagcgcgaa gcctttatgg cccgctggat
    13981 tggatgggcg atgcagcaaa ataatggcga cgtgttagtt gtctgcggtg gctggcacgc
    14041 tccggcactg gcaaagatgt ggcgcgaatg ccctcagaaa attaacaagc cagaattgcc
    14101 ctcgctggca gatgccgtta caggttgtta tctcacaccc tacagtgaaa agcgccttga
    14161 tgtgctggca ggataccttt caggaatgcc tgccccggta tggcaaaact ggtgctggca
    14221 gtggggcttg cagaaggccg gtgaacaact gctaaaaact atccttaccc gtttgcgcca
    14281 gcacaaattg cccgcttcta ccgcggatat ggctgccgct catctgcatg cgatggcgct
    14341 ggcacagttg cgcggtcata cactaccgtt acgcactgac tggctggatg ccatagcagg
    14401 ctcgctgatt aaagaagccc tgaacgcgcc gttgccgtgg agctatcgcg gcgttattca
    14461 tcccgatacc gatccgattc tgctaacgtt gatagacaca ttagcgggtg acggattcgg
    14521 taaacttgcc ccttctacgc cacaaccgcc tctgccaaaa gatgtcacct gcgaactgga
    14581 acgtaccgca atctcccttc cggcggagct taccttaaat cgctttaccc ccgatgggct
    14641 gacgcaaagt caggtgttac atcggctggc aatactggag atccctggga ttgtacgcca
    14701 gcagggaagt acactgacac ttgcaggcaa cggtgaagaa cgctggaaat taacccgccc
    14761 gcttagccag catgcggcat tgattgaggc cgcctgtttt ggtgccacac tccaggaagc
    14821 cgcacgcaat aaattagaag ccgatatgct ggacgcgggc ggaatcggca gtatcaccac
    14881 atgtcttagc caggcggcgt tagcgggtct ggcgtccttc agtcaacaat tactggagca
    14941 actcacacta ttaatcgccc aggaaaatca atttgccgaa atgggccagg cgctggaagt
    15001 gctttatgcc ttatggcggc tggatgaaat tagcggtatg caaggcgcgc agatattaca
    15061 aacgacgtta tgcgcgacta tcgatcgcac gctgtggctg tgtgaatcta acggcagacc
    15121 ggatgaaaag gagtttcacg ctcacctgca tagctggcaa gcgctttgcc atattctgcg
    15181 cgatctacat agcggcgtta atttacccgg cgtttctctt tctgcggcgg tagccttact
    15241 ggagcgacgc agtcaggcaa ttcatgcccc ggcgctggat cgcggcgcgg ctcttggcgc
    15301 actaatgcgt ctggaacatc ccaacgccag tgccgaagcg gcgctgacga tgctggcgca
    15361 gttatccccg gcacaatctg gtgaggcgct gcacggtttg ctggcgctgg cccgccatca
    15421 actggcctgt cagccggcat ttatcgccgg tttcagcagt catttaaatc aactgagtga
    15481 agccgatttt attaacgccc tgcccgattt acgcgcggcg atggcctggc taccaccacg
    15541 agaacgcggg acgctggcgc atcaggtgct tgagcattat caactggcgc aacttcccgt
    15601 ttcggcgctg caaatgccgt tgcattgtcc accacaggcc attgcacatc atcaacaact
    15661 cgaacagcag gcactggcat cgctgcaaaa ctggggagtt ttccatgtct gaactgaacg
    15721 atcttctgac cacccgtgag ctacaacgct ggcgattaat tcttggcgaa gcggcagaaa
    15781 cgacgctttg tgggctggat gacaacgccc ggcagataga ccacgcgctg gagtggctgt
    15841 atgggcgcga tcctgaacgg ctccagcgtg gtgaacgttc cggtggatta ggtggctcaa
    15901 atctcaccac ccctgagtgg atcaacagta ttcacacgct gtttccgcag caggtgattg
    15961 agcggctgga aagcgatgcc gtgctgcgct acggcattga agatgtggtg acgaatctcg
    16021 acgtgctgga acgtatgcag ccttctgaaa gcctgctacg cgctgttttg cacaccaaac
    16081 atctgatgaa ccccgaagta ctggctgccg cccgccggat agtgtgccag gttgttgaag
    16141 aaattatggc tcgactggca aaggaagttc gtcaggcttt ttctggtgtc cgcgatcgcc
    16201 gtcgccgttc atttattcca ctggcgcgaa actttgattt caaaagtact ctgcgcgcca
    16261 acctgcaaca ctggcacccg caacacggca agttgtatat cgaatccccc cgctttaaca
    16321 gccgcattaa acgccaaagc gaacaatggc aactggtctt actggttgat caaagcggct
    16381 cgatggtcga ttcggtgatc ccctctgcgg tgatggcggc ctgtttgtgg cagttacccg
    16441 gcattcgtac ccatctggtg gcgtttgaca caagcgtcgt tgatctcacg gcagacgttg
    16501 ccgatccggt agagttatta atgaaagtac agttgggcgg cgggaccaat atcgccagtg
    16561 ccgtggagta tggtcggcaa cttattgaac aaccagcgaa aagcgtcatt atcctcgtga
    16621 gcgattttta cgaagggggt tcatcatcat tactgacgca tcaggtgaaa aagtgtgtcc
    16681 agagcggcat caaagtgctg ggactggcag cgctcgatag cacagcaaca ccttgctatg
    16741 accgcgatac ggcccaggcg ctggttaatg tcggcgcaca aatagccgcc atgacaccgg
    16801 gcgagctggc atcatggctt gcggagaatc ttcagtcatg aattcactac gtccggaatt
    16861 attagaactg acaccgcagg ccctgacggc gttaagcaat gccggttttg ttaagcgcag
    16921 tcttaaggaa ctggaaaatg gcaacgtccc ggagatcagc catgagaacg gcgctttaat
    16981 cgccaccttc agtgacggtg tccgtaccca gctggcgaac ggccaggcac tgaaagaggc
    17041 tcagtgcagc tgcggggcca gcggtatgtg ccgtcatcgc gtgatgctgg tgttaagtta
    17101 tcaacgactt tgtgctaccg cccagcctac gggaaaagaa gaggaatggg atccggcaat
    17161 ctggctggaa gaactggcta cccttcccga tgccacccgc aaacgcgcac aggcgctggt
    17221 cgctaaaggc atcaccattg agttgttctg tgcgccgggt gaaattccct ctgcccgctt
    17281 accgatgagc gatgtgcgtt tttattcccg cagcagtatt cgtttcgccc gttgtgattg
    17341 tattgaaggc acactttgcg aaca
//
LOCUS       DADMJE010000084        17344 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.085, whole genome shotgun sequence.
ACCESSION   DADMJE010000084 DADMJE010000000
VERSION     DADMJE010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17344
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.085"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            191..2038
                     /gene="ldtD"
                     /locus_tag="JN001_002468"
     CDS             191..2038
                     /gene="ldtD"
                     /locus_tag="JN001_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY9053668.1"
                     /translation="MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAV
                     SEQGEALPQAQATAIMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARD
                     MQPMWENRDAVKAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGY
                     LHFIANIPVKGTRWLYSSKPYALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYA
                     AMHESLLALLSDTKPWPQLTGKATLRPGQWSNDVPALREILQRTGMLDGGPKITLPGD
                     DTPTDAVVSPSAVTVETAETKPMDKQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGL
                     GADGAIGPATRDWLNVTPAQRAGVLALNIQRLRLLPTELSTGIMVNIPAYSLVYYQNG
                     NQVLDSRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVRNDPGYLESH
                     GYTVMRGWNSREAIDPWQVDWSTITASNLPFRFQQAPGPRNSLGRYKFNMPSSEAIYL
                     HDTPNHNLFKRDTRALSSGCVRVNKASDLANMLLQDAGWNDKRISDALKQGDTRYVNI
                     RQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPARSSSQIVSKAEQLIR"
     gene            2219..2767
                     /locus_tag="JN001_002469"
     CDS             2219..2767
                     /locus_tag="JN001_002469"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcbK family protein"
                     /protein_id="HAY9053669.1"
                     /translation="MDKFDANRRKLLALGGVALGAAILPTPAFATLSTPRPRILTLNN
                     LHTGESIKAEFFDGRGYIQEELAKLNHFFRDYRANKIKSIDPGLFDQLYRLQGLLGTR
                     KPVQLISGYRSIDTNNELRARSRGVAKKSYHTKGQAMDFHIEGIALSNIRKAALSMRA
                     GGVGYYPRSNFVHIDTGPARHW"
     gene            2794..3441
                     /gene="gloC"
                     /locus_tag="JN001_002470"
     CDS             2794..3441
                     /gene="gloC"
                     /locus_tag="JN001_002470"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003035823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase GloC"
                     /protein_id="HAY9053670.1"
                     /translation="MNYRIIPVTAFSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDD
                     SGLTLMQILLTHGHLDHVGAAAELAQHYGVPVFGPEKEDEFWLQGLPAQSRMFGLEEC
                     QPLTPDRWLNEGDTISIGNVTLQVLHCPGHTPGHVVFFDDRAKLLISGDVIFKGGVGR
                     SDFPRGDHNQLISSIKDKLLPLGDDVTFIPGHGPLSTLGYERLHNPFLQDEMPVW"
     gene            complement(3663..4853)
                     /locus_tag="JN001_002471"
     CDS             complement(3663..4853)
                     /locus_tag="JN001_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009653304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate/tyrosine/aromatic aminotransferase"
                     /protein_id="HAY9053671.1"
                     /translation="MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTP
                     VLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARMAQTPG
                     GTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD
                     ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFA
                     RGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMK
                     AAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRIQRMRQLFVNTLQEKGA
                     NRDFSFIIKQNGMFSFSGLTKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI
                     VAVL"
     gene            complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JN001_002472"
     CDS             complement(5038..6126)
                     /gene="ompF"
                     /locus_tag="JN001_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpF"
                     /protein_id="HAY9053672.1"
                     /translation="MMKRNILAVIVPALLVAGTANAAEIYNKDGNKVDLYGKAVGLHY
                     FSKGNGENSYGGNGDMTYARLGFKGETQINSDLTGYGQWEYNFQGNNSEGADAQTGNK
                     TRLAFAGLKYADVGSFDYGRNYGVVYDALGYTDMLPEFGGDTAYSDDFFVGRVGGVAT
                     YRNSNFFGLVDGLNFAVQYLGKNERDTARRSNGDGVGGSISYEYEGFGIVGAYGAADR
                     TNLQEAQPLGNGKKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTNTSGFANKT
                     QDVLLVAQYQFDFGLRPSIAYTKSKAKDVEGIGDVDLVNYFEVGATYYFNKNMSTYVD
                     YIINQIDSDNKLGVGSDDTVAVGIVYQF"
     gene            complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JN001_002473"
     CDS             complement(6728..8128)
                     /gene="asnS"
                     /locus_tag="JN001_002473"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005123540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HAY9053673.1"
                     /translation="MSVVPVADVLQGRVAVDSEVTVRGWVRTRRDSKAGISFLAVYDG
                     SCFDPVQAVINNSLPNYNEDVLRLTTGCSVIVTGKVVASPGQGQQFEIQASKVEVAGW
                     VEDPDTYPMAAKRHSIEYLREVAHLRPRTNLIGAVARVRHTLAQALHRFFNEQGFFWV
                     STPLITASDTEGAGEMFRVSTLDLENLPRNDQGKVDFDKDFFGKESFLTVSGQLNGET
                     YACALSKIYTFGPTFRAENSNTSRHLAEFWMLEPEVAFANLNDIAGLAEAMLKYVFKA
                     VLEERADDMKFFAERVDKDAVSRLERFIEADFAQVDYTDAVTILENCGRKFENPVYWG
                     VDLSSEHERYLAEEHFKAPVVVKNYPKDIKAFYMRLNEDGKTVAAMDVLAPGIGEIIG
                     GSQREERLDVLDERMLEMGLNKEDYWWYRDLRRYGTVPHSGFGLGFERLIAYVTGVQN
                     VRDVIPFPRTPRNASF"
     gene            complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JN001_002474"
     CDS             complement(8297..9499)
                     /gene="pncB"
                     /locus_tag="JN001_002474"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706850.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HAY9053674.1"
                     /translation="MTQFASPVLHSLLDTDAYKLHMQQAVFHHYYDVHVAAEFRCRGD
                     DLLGIYADAIREQIQAMQHLRLQDDEYQWLSALPFFKADYLNWLREFRFNPEQVTVSN
                     DNGKLDIRLSGPWREVILWEVPLLAVISEMVHRYRSPQADVAQALDTLESKLVDFSAL
                     TAGLDMSRFHLMDFGTRRRFSREVQETIVKRLQQESWFVGTSNYDLARRLSLTPMGTQ
                     AHEWFQAHQQISPDLANSQRAALAAWLEEYPDQLGIALTDCITMDAFLRDFGVEFASR
                     YQGLRHDSGDPVEWGEKAIAHYKKLGIDPQSKTLVFSDNLDLRKAVELYRHFSSRVQL
                     SFGIGTRLTCDIPQVKPLNIVIKLVECNGKPVAKLSDSPGKTICHDKAFVRALRKAFD
                     LPHIKKAS"
     gene            9765..12377
                     /gene="pepN"
                     /locus_tag="JN001_002475"
     CDS             9765..12377
                     /gene="pepN"
                     /locus_tag="JN001_002475"
                     /EC_number="3.4.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000193787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HAY9053675.1"
                     /translation="MTQQPQAKYRHDYRAPDYQITDIDLTFDLDAQKTVVTAVSQAVR
                     HGASDAPLRLNGEDLKLVSVHINDEPWTAWKEEEGALVISNLPEHFTLKIVNEISPAA
                     NTALEGLYQSGDALCTQCEAEGFRHITYYLDRPDVLARFTTKIIADKTKYPFLLSNGN
                     RVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRG
                     NLDRAPWAMTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYV
                     LARTDTATDKDYLDIERVIGHEYFHNWTGNRVTCRDWFQLSLKEGLTVFRDQEFSSDL
                     GSRAVNRINNVRTMRGLQFAEDASPMAHPIRPDMVIEMNNFYTLTVYEKGAEVIRMIH
                     TLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSHFRRWYSQSGTPIVTV
                     KDDYNPETEQYTLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVISLQKGGHPVNS
                     VLNVTQAEQTFVFDNVYFQPVPALLCEFSAPVKLEYKWSDQQLTFLMRHARNDFSRWD
                     AAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDPALAAEILTLPSVNE
                     MAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANYQSEYRVEHEDIAKRTLRN
                     ACLRFLAFGETHLADVLVSKQFHEANNMTDALAALSAAVAAQLPCRDALMQEYDDKWH
                     QDGLVMDKWFILQATSPAANVLETVRGLLQHRSFTMSNPNRIRSLIGAFAGSNPAAFH
                     AEDGSGYQFLVEMLTDLNSRNPQVASRLIEPLIRLKRYDAKRQEKMRAALEQLKGLEN
                     LSGDLYEKITKALA"
     gene            complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JN001_002476"
                     /pseudo
     CDS             complement(12420..13171)
                     /gene="ssuB"
                     /locus_tag="JN001_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309043.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonates ABC transporter ATP-binding
                     protein"
     gene            complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JN001_002477"
                     /pseudo
     CDS             complement(13168..13905)
                     /gene="ssuC"
                     /locus_tag="JN001_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001714028.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic sulfonate ABC transporter permease
                     SsuC"
     gene            complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JN001_002478"
                     /pseudo
     CDS             complement(13970..15115)
                     /gene="ssuD"
                     /locus_tag="JN001_002478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706856.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FMNH2-dependent alkanesulfonate monooxygenase"
     gene            complement(15112..16071)
                     /locus_tag="JN001_002479"
     CDS             complement(15112..16071)
                     /locus_tag="JN001_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonate ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9053676.1"
                     /translation="MRNIIKLALVGLLSVSTIAVAAESSPEALCIGYQKGSIGMVLAK
                     SHQLLEKRYPQSKISWVEFPAGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADLVYVG
                     VEPPKPKAEVILVAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQP
                     TYLTPADARAAFQQGNVDAWAIWDPYYSAALLQGGVRVLKDGTDLNQTGSFYLAARPY
                     AEKNGAFIQGVLATFSEADALTRSQREQSIALLAKTMGLPAPVIASYLDHRPPTTIKP
                     VNAEVAALQQQTADLFYENRLVPKKVDIRQRIWQPTQLEGKQL"
     gene            complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JN001_002480"
     CDS             complement(16064..16639)
                     /gene="ssuE"
                     /locus_tag="JN001_002480"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HAY9053677.1"
                     /translation="MRVITLAGSPRFPSRSSSLLEYAREKLNGLDVEVYHWNLQNFVP
                     EDLLYARFDSPALKTFTEQLQQADGLIVATPVYKAAYSGALKTLLDLLPERALQGKVV
                     LPLATGGTVAHLLAVDYALKPVLSALKAQEILHGVFADDSQVIDYHHRPQFTPNLQTR
                     LDTALETFWQALHRRDVQVPDLLSLRGNAHA"
     gene            complement(17096..17335)
                     /locus_tag="JN001_002481"
                     /pseudo
     CDS             complement(17096..17335)
                     /locus_tag="JN001_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706859.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         4372 a         4441 c         4397 g         4134 t
ORIGIN      
        1 taacggcgcg cttttcttta aacttcttta cattaggtta tgtaaaaacg tatcggcgtt
       61 tatatactga agataagcct gatgagtaac aggcttgctc gtcatacttt cgtgagtatt
      121 ggcgttgtac aggcaagtcg taaaataaca gcctggctat tcagagtatg ataaaaacag
      181 ggggcaaggg atgttgctta atatgatgtg tggtcgtcgg ctgtcggcaa tcagtttgtg
      241 cctggccgta acattcgctc cactgttcaa tgcgcaggcc gatgagcctg aagtaatccc
      301 tggcgacagc ccggtggctg tcagtgaaca gggcgaggca ctgccgcagg cgcaagccac
      361 ggcaataatg gcggggatcc agccattgcc tgaaggtgcg gcagaaaaag cccgcacgca
      421 aatcgaatct caattacccg caggttacaa gccggtttat cttaaccagc ttcaactgtt
      481 gtatgccgca cgcgatatgc aacccatgtg ggaaaaccgt gatgctgtta aagccttcca
      541 gcaacagctg gcagaggtgg cgattgccgg tttccagccg cagtttaata aatgggtaga
      601 gttactgacc gatcctggtg ttaacgggat ggcacgcgac gtagtgctct ctgatgcgat
      661 gatgggctat ctccatttca ttgcaaatat tccggtcaaa ggcactcgct ggctatatag
      721 cagtaaacct tatgcacttg caacgccgcc gctctcggtg attaaccaat ggcagctggc
      781 gctggataaa ggtcaattgc ctacgtttgt tgcaggactg gcaccgcagc atccgcaata
      841 tgcggcgatg catgaatcgt tactggcctt actcagtgac accaaaccgt ggccccaact
      901 gaccggcaaa gcaacgttgc gcccagggca gtggagtaac gacgtaccgg cgttgcgcga
      961 aatattgcaa cgcacaggca tgttggacgg ggggccgaaa attactctac ctggcgatga
     1021 cacgccaact gacgcggtag tcagcccatc cgctgttact gttgaaacag cagaaactaa
     1081 gccgatggac aagcaaacga cgtctcgtag taaacctgcg cctgccgttc gcgccgccta
     1141 cgataatgaa ctggtggaag ccgttaaacg ttttcaggca tggcaaggat tgggggcaga
     1201 tggtgctatt ggcccggcaa cacgtgactg gttaaacgta acgcccgccc agcgtgctgg
     1261 cgtgttggct ctcaacatcc agcgattgcg cttgctgcca acagagcttt ctaccgggat
     1321 catggttaac attccggcct attcgctggt ctactatcag aacggcaatc aggtgctgga
     1381 ttcgcgagtc attgtcggtc gccccgatcg caaaacgccg atgatgagca gtgcccttaa
     1441 caacgtagtg gtaaacccgc cgtggaacgt acctccaact ctggcacgca aagatattct
     1501 gccaaaagtg cgcaacgatc cgggatatct cgaaagccat ggctatacgg tgatgcgtgg
     1561 ctggaacagc agagaagcga ttgacccatg gcaggttgac tggtctacaa tcacggcctc
     1621 gaatttaccg ttccgcttcc agcaggctcc aggcccacgg aactcgctgg ggcgctataa
     1681 attcaatatg ccgagttcag aggccattta tttgcatgac acgccgaacc acaatctgtt
     1741 caagcgtgat acacgcgcat tgagctcagg ctgtgtacga gtgaataaag cttccgatct
     1801 ggcgaatatg ctgttgcagg atgcaggctg gaatgacaaa cgtatttctg atgcgctgaa
     1861 gcagggtgat acacgttacg tcaatattcg gcagtcgatt ccggtgaatc tctactacct
     1921 gacggccttt gttggtgcag atggtcgtac ccagtatcgt acagatattt acaattatga
     1981 tctgcctgcg cgatccagct cgcaaatcgt atcgaaagcg gaacaattaa tcaggtaaat
     2041 gaagtagttc ggggaaatca gttgtcgtaa taattagcat gattgggggc gattctctgc
     2101 agcccccgtc actgctgggg ttgagtcatc ttgacgtctg ctttacgggc ggttaaggtg
     2161 cctcttgtgc gccagaagtg catataaacg ataacattga cctgtagact tgattatcat
     2221 ggacaaattc gacgctaatc gccgcaaatt gctggcgctt ggtggcgttg cactcggtgc
     2281 cgccatcctg ccgacccctg cgtttgcaac actctctacc ccacgcccgc gcattttgac
     2341 actcaataat cttcataccg gagagtcaat caaagcggag tttttcgatg gcagaggcta
     2401 tattcaggaa gaattggcaa aacttaacca ttttttccgc gattaccgcg cgaacaaaat
     2461 aaagtccatc gacccaggat tattcgacca gttgtatcgc ctgcaagggt tgttaggcac
     2521 gcgcaaaccg gtgcaactca tttccggtta tcgttccatt gataccaaca atgaactacg
     2581 cgcccgcagc cgtggagtag cgaagaaaag ctatcacact aaaggccagg cgatggattt
     2641 ccatattgaa ggtatcgcgt taagcaatat tcgcaaagcc gcgttatcta tgcgcgcagg
     2701 tggtgtagga tattacccac gtagtaactt tgtgcatatt gataccgggc cagcacggca
     2761 ctggtagcaa tcgcttaacg aaacaggggc agtatgaact atcgtattat tccggtcacc
     2821 gcattctccc agaactgttc attaatctgg tgtgaacaaa cccgtctggc cgcactggtc
     2881 gatcctggcg gcgatgcgga aaaaatcaaa caggaagttg atgacagcgg cctgacactg
     2941 atgcagatcc tgctgacgca tggtcatctg gaccacgttg gcgcagcggc ggaactggcg
     3001 caacattacg gcgtgccggt ttttggcccg gaaaaagaag atgagttctg gctgcaaggc
     3061 ttgcctgcgc aaagtcgtat gtttggtctg gaagagtgcc agccgctgac gccagatcgt
     3121 tggctgaacg aaggcgatac catcagcata ggaaatgtga ctttacaggt gttacattgc
     3181 cctgggcata cgccgggtca tgtcgtgttt tttgatgatc gggcaaagct gctgatttct
     3241 ggcgatgtta ttttcaaagg cggagtaggg cgcagtgact tcccgcgtgg cgatcataat
     3301 caactgattt cttcaatcaa agataaattg ctgccactgg gggatgacgt gacatttatt
     3361 ccgggtcacg gaccattatc cacacttggt tatgaacgcc tgcataatcc cttcctgcaa
     3421 gacgaaatgc ccgtctggta aggcacataa aaaagcccgc ttttaatgcg ggcctggatt
     3481 tctggcaaag tgcgctttgt ttatgccgga tgcggcacga gcgccttatc cggcctacaa
     3541 aatcgtgcaa attcaaaata ttgcagggga cgcgtaggcc tgataagcgt agcgcatcag
     3601 gcaatgttgc gtttgtcatc agtctcagcc cgcttttcag cgggcttcat tgtttttaat
     3661 gcttacagca ctgccacaat cgcttcgcac agcggagcca tgttatctgg tgtcatcccg
     3721 gccacattta cgcgaccaga agcaaccgca tatacgccaa actcttcgcg cagacgcagc
     3781 acttgttctt ttgtcaggcc actgaaggag aacatgccgt tctgtttgat gataaagctg
     3841 aagtcgcggt ttgcgccttt ttcctgcagc gtattgacga acaactgacg catacgctga
     3901 atacgctggc gcatatcagt cagctcttgt tcccaaatcg cacgtaacgc atcgttgctc
     3961 aggatggtgg caacaacaga agcgccgtgt gctggtgggt tagagtagtt agcgcgaatc
     4021 gccgctttca tttggctgaa tgcgcgatca acggtttcac tgtcggcagc aaccagagta
     4081 caagcgccaa cacgctcgtt gtacaggcca aagtttttag agtaggaact ggcaacaatc
     4141 agctctttat gcatagccgc gaaagcgcgc agtccttcag catcttcttc cagaccacgg
     4201 gcaaaaccct ggtaagcgaa gtcaaacagc ggtaaccagc ctttctcaac ggagagttgt
     4261 gccagtgtct gccattgttc cagcgtaggg tcgataccgg ttgggttatg gcagcagcca
     4321 tggaacagca ctacgtcgcc agcctgagct tcattcaggc tgttaatcag tgcatcgaag
     4381 tcaagagtgt gattttccgc atcataataa gcgtattcac gaacttccag acctgcagag
     4441 ttaaagacgc tcttatggtt cggccagctt gggttgctca cccacactcg cttaacgctg
     4501 gtattttttg ccaggaaatc ggcagctacg cgtagtgcgc cagtgccccc cggagtctgt
     4561 gccatgcgag cacgtttgtc attgatcagg gcgctacctt taccaaacag cagttcctga
     4621 gtgcagcgac caaattcagg gatgccgtca atgccgaggt aatttttggt ggtttcattt
     4681 tcgagcagat actgttcagc ctttttcacg ctggtcagta ccggggtttt gcccgtctca
     4741 tctttataga caccaatccc gaggttaatt ttgccgggac gttcatcggc acgaaacaga
     4801 tcggccaggc ccagaatcgg gtcggcagga gcggcggtaa tgttctcaaa catgacgagg
     4861 ttccattatg gttacagaag ggaagtccgc tatcagggta acgggagatt tacaaaattc
     4921 caactattac tgatgaaaac gcaggctgtt tttgcaagac gtgagattgc tctggaaggt
     4981 ataaaaaaaa caggaccaaa gtcctgtttt ttcggcattt aacaaagagg tgtgctatta
     5041 gaactggtaa acgataccca cagcaacggt gtcgtctgaa cctacgccca gtttgttatc
     5101 agaatcgatc tggttgatga tgtagtcaac ataggtggac atgtttttgt tgaagtagta
     5161 ggttgcgccc acttcaaagt agttcaccag atcaacatca ccgatacctt ctacgtcttt
     5221 cgctttagat ttggtgtaag cgatggacgg acgcagaccg aaatcgaact ggtattgcgc
     5281 aactaacaga acgtcttgcg ttttgttggc gaagccgctg gtgtttgtaa atttattagt
     5341 gatcggcgta gcgttacggg tttcaccgta gttcgctgcc aggtagatgt tgttcgcgtc
     5401 gtacttcaga ccagtagccc actgttcagc ttttttaccg ttgccaagag gttgagcttc
     5461 ttgcaggttg gtacggtcag ctgcaccata agcaccaacg ataccaaagc cttcgtattc
     5521 gtagctgata gaaccgccaa caccgtcgcc gttagaacgg cgtgcagtgt cacgctcgtt
     5581 tttacccagg tactgaacag cgaagttcag gccatcaacc agaccaaaga agttggagtt
     5641 acgataggta gcaacgccgc caacacgacc aacgaagaag tcatcgctgt atgcagtatc
     5701 accaccaaat tctggcagca tatcggtgta acccagtgca tcataaacca caccgtagtt
     5761 acggccgtaa tcgaaagaac caacgtcagc gtatttaaga cccgcgaatg ccagacgcgt
     5821 tttgttacca gtttgagcgt cagcgccttc agagttgtta ccttggaagt tatattccca
     5881 ctgaccataa ccggtcagat cggaattgat ttgagtttcc cctttaaaac caagacgggc
     5941 ataggtcatg tcgccattgc caccgtaact gttttcaccg ttacccttgg aaaaataatg
     6001 cagaccaaca gctttaccgt acagatctac tttgttgcca tctttgttat agatttctgc
     6061 agcgtttgca gtacctgcta ctaacagagc agggacgatc actgccagaa tattgcgctt
     6121 catcattatt tattaccctc atggtttttt ttatgacacc tgccactgcc gtcaataagt
     6181 tctgtcaata aaaatttacg gaactattga tgagagtttg gtgtctttat gtgtctgcag
     6241 gcatctttcc attcaaacta acgtttcgct accgtgaaag tgctgcaaag ataaagattt
     6301 agtttcaaaa agaaaaaata tgcaaccaaa agtaaaaatt aaggaacttt gtgaacaccg
     6361 tcatatttcc atagaaacgt gatgatattt acagcaattt ttatctattt atatgattta
     6421 cttatattta aattaactaa gcggaaattt tgtttctgat ggaaacttta tcgacctggc
     6481 acaaaatcct ctttcagaca tccagaatgc caaaaaatag tatgaaaatt gtgctatcag
     6541 ctaagaaaaa actaatccgc aataagaata cgggttattt tttgtgcgta aatgttgcaa
     6601 tgtaatattc cgtaacagga tgatcgttat ggcggggttg caaatagatt gcttgactta
     6661 acaaacagat aacttgacag aaaggataaa aaagagccag caggcgctgg ctctttgagg
     6721 aagaaaatca gaagctggcg ttgcgcggag tacgtgggaa cggaatcaca tcacgcacgt
     6781 tttgcacgcc agttacgtaa gcaatcaggc gttcaaaacc aagaccgaaa cctgaatgcg
     6841 gaacagtacc gtagcgacgc agatcgcgat accaccagta atcttcttta ttcaggccca
     6901 tttccagcat acgctcgtcc agaacgtcca gacgttcttc acgctgggag cctccaatga
     6961 tctcaccgat gcccggagcc agaacgtcca tagccgcaac ggttttaccg tcttcgttga
     7021 ggcgcatata gaacgcttta atatctttcg gatagttttt aaccactacc ggtgctttaa
     7081 agtgttcttc cgccagataa cgctcatgct cagaagagag atcgacgccc cagtaaaccg
     7141 ggttttcaaa cttcctgccg cagttttcga gaatggtcac tgcgtcggtg taatccacct
     7201 gcgcgaaatc ggcctcaatg aagcgttcca gacgtgaaac ggcatcttta tctacgcgtt
     7261 cagcgaagaa tttcatgtcg tctgcgcgtt cttcgagaac cgctttgaag acatatttca
     7321 gcatggcttc agccagaccc gcgatatcgt tcaggttagc aaacgccact tccggctcca
     7381 gcatccagaa ttccgccagg tgacggctgg tgttggagtt ttcagcacgg aaagtcgggc
     7441 cgaaggtata aattttggat aatgcgcaag cgtaggtttc gccgttcaac tggccagata
     7501 cggtcaggaa agactcttta ccaaagaagt ctttgtcgaa atccactttg ccctgatcgt
     7561 tacgcggcag gttttccaga tccagcgtag aaacgcggaa catttcgcct gcaccttcgg
     7621 tatcagatgc ggtaatcagt ggcgttgaaa cccagaagaa tccctgctcg ttaaagaagc
     7681 gatgcagcgc ctgcgccagc gtatggcgaa cgcgcgcgac ggcaccaatc aggtttgtgc
     7741 gcggacgcag gtgagcgact tcacgcagat actcaatgct gtggcgtttt gccgccatcg
     7801 ggtaagtgtc tggatcttca acccaaccag caacttcaac tttgctggcc tgaatttcaa
     7861 attgttgccc ctggcccggc gacgccacga ctttacccgt cacaatgacc gagcagccgg
     7921 tggtcagacg caggacgtct tcattgtaat tgggcagaga attattgatg acagcctgta
     7981 caggatcaaa gcaggaaccg tcataaacgg cgaggaagga gatgccagct tttgaatctc
     8041 ggcgggtacg tacccatccg cgtacggtga cttcgctgtc aacggctacg cggccctgga
     8101 gtacgtcggc tacaggcaca acgctcataa tattctctct gttaatagtc ggaaaaaata
     8161 aacacttgtc cacccgtaaa tggggggata cctatgttac ctggcatctg caatcagaca
     8221 agcagaattc gcaaatgcag cgaaagattt cggaattaaa ggtaaaaaaa gggagccgat
     8281 tagctccctg atgatattaa ctggcttttt taatatgcgg aaggtcgaac gctttgcgca
     8341 gcgcccgaac aaacgcttta tcatggcaga tagttttgcc agggctgtca gaaagtttcg
     8401 ccaccggttt accgttacac tctaccaact taatcacaat attcaggggt tttacctggg
     8461 ggatatcgca ggtcaggcga gtcccaatac caaaacttaa ttgcacgcgg gaagagaagt
     8521 ggcggtatag ctcaaccgct ttgcgtaaat ccagattgtc agagaaaacc agcgttttac
     8581 tctgtggatc aattcccagc tttttataat gtgcaatggc tttttcaccc cattcaaccg
     8641 ggtcgccaga gtcatgacgc aggccctgat accgactggc gaactcgaca ccgaaatcac
     8701 gcaggaaagc atccatagtg atgcagtcgg ttaatgcaat gccaagttgg tcgggatatt
     8761 cttccagcca ggcagcaagt gcagctcgct ggctgttggc taggtccggg ctgatttgct
     8821 gatgtgcctg gaaccattcg tgcgcctgtg ttcccatcgg cgtgagggaa agccgacgcg
     8881 ccagatcgta gttgctggtg cccacgaacc aggattcctg ttgcagacgc ttaacgatgg
     8941 tttcttgtac ttcgcgagaa aaacggcgac gggtgccaaa atccatcaga tggaagcgcg
     9001 acatatcaag accggcggtt aacgccgaga agtcgactaa tttgctttcc agcgtgtcga
     9061 gggcttgcgc aacgtcggcc tgcggtgagc gatagcgatg taccatttca ctgataaccg
     9121 ccagcaaagg aacttcccag aggatgactt cacgccacgg accgcttaag cgaatatcca
     9181 gcttgccatt atcgttggac acggtgactt gttccgggtt aaagcggaat tcgcgtaacc
     9241 agttaagata gtcggcctta aagaaaggca gggcagagag ccactgatat tcatcatcct
     9301 gcaggcgcag gtgctgcatc gcctgaatct gttcacgaat agcatcggca taaataccca
     9361 gcagatcgtc acctcggcaa cgaaactccg ccgcgacatg cacatcgtaa tagtgatgaa
     9421 acacggcttg ctgcatatgc aacttataag catctgtatc cagcaacgag tgcagaacag
     9481 gagaagcgaa ttgtgtcata ggtgcgcagt agcatcctcg tacaggagcg tttagtacaa
     9541 taaacatctt caggaactgc tggagtatac cttgtttcgc aatttattga accccgatca
     9601 caccatatgc cacctttctg gtcgatggca ttacgcggtg tatgttataa aaatgtagca
     9661 ataaaggcgt ttgtacctga aaagatgaag attctgcata gcgcgattta cgcaacagga
     9721 atagactgaa caccagactc tataaaagat gctaaaggtt atttatgact caacagccac
     9781 aagccaaata ccgtcacgat tatcgtgcgc cggattacca gattactgat attgacttga
     9841 cctttgacct cgacgcgcaa aagacggtcg ttaccgcggt cagccaggct gtccgtcatg
     9901 gtgcatcaga tgctccgctt cgtctcaacg gcgaagacct caaactggtt tctgttcata
     9961 ttaatgatga gccgtggacc gcctggaaag aagaagaggg cgcactggtc atcagtaatt
    10021 tgccggagca ttttacgctt aagatcgtta atgaaataag cccggcggcg aataccgcgc
    10081 tggaagggct ttatcagtca ggcgatgcgc tttgcaccca gtgtgaagcc gaaggtttcc
    10141 gccatattac gtattatctc gaccgcccgg acgtgctggc gcgttttacc accaaaatta
    10201 ttgccgataa aaccaaatat cccttcctgc tttccaacgg taaccgcgtt gcgcaaggtg
    10261 aactggaaaa cggacgccat tgggtacagt ggcaggaccc gttcccgaaa ccgtgctacc
    10321 tgtttgcgct ggtggcaggc gactttgatg tactgcgcga cacctttacc acgcgttctg
    10381 gtcgcgaagt ggcgctggag ctgtacgtcg atcgcggcaa ccttgatcgc gcgccgtggg
    10441 cgatgacctc gctgaaaaac tcaatgaaat gggatgaaga acgcttcggc ctggagtatg
    10501 acctcgacat ctatatgatc gtcgcggtgg atttcttcaa tatgggcgca atggagaata
    10561 agggtttgaa tatctttaac tccaaatatg tgctggcccg caccgacacc gccactgaca
    10621 aagattacct cgatattgaa cgcgttatcg gccatgaata tttccataac tggaccggta
    10681 accgagtcac ctgccgcgac tggttccagc tcagcctgaa agaaggttta accgtcttcc
    10741 gcgatcagga attcagctct gaccttggtt cccgtgcagt taaccgcatc aataatgtgc
    10801 gcaccatgcg cggattgcag tttgcggaag acgccagccc gatggcgcac ccgatccgcc
    10861 cggacatggt cattgagatg aacaacttct ataccctgac cgtttacgag aagggcgcgg
    10921 aagtgatccg tatgatccac accctgctgg gcgaagaaaa cttccagaaa gggatgcaac
    10981 tctatttcga gcgccatgat ggcagcgcgg caacctgcga cgactttgtg caggcgatgg
    11041 aagatgcgtc gaatgtcgat ctctcccatt tccgccgttg gtacagccag tccggcacgc
    11101 cgattgtgac cgtcaaagac gactacaatc cggaaaccga gcagtacacc ctgaccatca
    11161 gccagcgcac gccagccacg ccggatcagg cagaaaaaca gccgctgcat attccgtttg
    11221 ccatcgaatt gtatgacaac gaaggcaaag tgatctcgtt gcagaaaggc ggtcatccgg
    11281 tgaattccgt gctgaacgtc acccaggcgg aacagacctt tgtttttgat aatgtctact
    11341 tccagccggt gcctgcgctg ctgtgcgaat tctctgcgcc agtgaaactg gaatataagt
    11401 ggagcgatca gcaactgacc ttcctgatgc gtcatgcgcg taatgatttc tcccgctggg
    11461 atgcggcaca aagcctgctg gcaacctaca tcaagctgaa cgtcgcccga catcagcaag
    11521 ggcagccgct gtctctgccg gtacatgtgg ctgacgcttt ccgcgcagtg ctgctcgatg
    11581 agaagattga tccggcgctg gcggcagaaa tcctgacgct gccttctgtc aatgaaatgg
    11641 ctgaactgtt cgatatcatc gacccgattg ctattgccga agtacgcgaa gcactcactc
    11701 gtactctggc gactgaactg gcggatgagc tgctggctat ttacaacgcg aattaccaga
    11761 gcgagtaccg tgttgagcat gaagatattg cgaaacgcac tctgcgtaat gcctgcctgc
    11821 gcttccttgc ttttggtgaa acgcatctgg ctgacgtgct ggtgagcaag cagttccacg
    11881 aagcgaacaa tatgaccgat gcgctggcgg cgctttctgc ggcggttgcc gcacagctgc
    11941 catgccgtga tgcgctgatg caggaatacg acgataagtg gcatcaggac ggtctggtga
    12001 tggataaatg gtttatcctg caagccacca gcccggcggc gaatgtgctg gagacggtgc
    12061 gcggtctgtt gcagcatcgc tcatttacca tgagcaaccc gaaccgtatt cgttcgttga
    12121 ttggcgcgtt tgcgggcagc aatccggcag cgttccatgc cgaagatggg agcggttacc
    12181 agttcctggt ggaaatgctt accgacctca acagccgtaa cccgcaggtg gcttcacgtc
    12241 tgattgaacc gctgattcgc ctgaaacgtt atgatgccaa acgtcaggag aaaatgcgcg
    12301 cggcgctgga acagttgaaa gggctggaaa atctctctgg cgatctgtac gagaagatca
    12361 ccaaagcact ggcttgataa ataaccgaat ggcggcaata gcgccgccat tcggggaatt
    12421 tacccctgtt ttctcaggcg aatttcagat tcaccacgct gcatcaccct ttgcaacact
    12481 tccgattcca gctccgctaa tcgcaccgac cctaatcgac gcggaggggg gatatccact
    12541 gtcaaatcca gaccaatttt tccctcttca attaataaca cccggtcagc cattgctacc
    12601 gcttcgctca catcatgcgt caccaacagt acggtaaagc cgtgctcctg ccaaagtgac
    12661 acaatcaaat cctgcatctc gagtcgcgtt aaggcgtcca gtgccccgag cggttcatca
    12721 agcaacaata aacccggtcg atgaatcaac gctcttgcca gcaccactcg ctgtttctgc
    12781 ccgcctgaaa gtgcggcagg ccattccccg gcgcgattct ccagtcctac cgcagccaac
    12841 gcccgacgcg cggcatcgcg ccactggcct ttaaggccta acccaacgtt atcaatcacc
    12901 gatttccacg gtagcagacg cgcatcctga aacatcattc gcgtgtcttc ctgaatttca
    12961 gccagcggtg tggtgcctgc caacacatcg cctgcggttg gcgtttccag cccggccagc
    13021 aggcgcagca gggtactttt gccaccaccg ccacaaactg acctgccgga atatgtaaat
    13081 ccagttggtt caggacgata ttttccgcgt aatgtttgct tactgcattg agcaacaatg
    13141 gtgtgccctg gttcagacga gcagtattca taccgtggcc tccttcaaat gataagccgg
    13201 gttccagcgc aaccagaggc gctctaacag ctgcgcgctg acgtcagcaa gtttgccgag
    13261 cagggcgtaa agaataatag cgactaccac cacgtccgtt tgcaaaaact ctcgcgcatt
    13321 catcgccaga taaccaatgc cggaattggc agaaatggtt tcggcaacaa tcagcgtcag
    13381 ccacatcagg cccaacgcaa aacgcacgcc gaccataatt gagggcaggg caccaggcag
    13441 gatcacatgg ataaacagcg gtatgccgga taacccatag ctacgcgcca tctccaccag
    13501 cccgcgatcg atattacgga tgccatgcca ggtgttgata taaatgggaa acagcgtacc
    13561 gagcgccacc agaaagattt ttgcggattc atcaatgcca aaccacaaaa tcaccagcgg
    13621 gatcagcgcc agatgcggca cgttgcgcaa catctgaatt gaggtatcca gcagccgttc
    13681 tccccagcga gatagcccgc taatcagtcc caaaatcaac cccagcgatc cgccaattga
    13741 aaagccaatc agcgcccgct aggaactgat cgccagatgc tgccacagtt cgccgctggc
    13801 ggagagcgtc cagaacgccg tcaccacccc ttccggtgag ggcaaaatac gcgtcgacag
    13861 ccagccaact gaggaggcca gttgccacac cgccacgatg cccaccggta aaaactaggg
    13921 ggcaacgcgc aataaccact tcttcactgg cgttgccatt atttcttcct tagctttgcg
    13981 cgactttacg ggggataaaa tcattcgcca ccgcttcgcc ttgcggattc agcggctgcg
    14041 gctggggaat ttccggaatg gcgacatcca gatgtgggaa cagcaactcg ccgacccgat
    14101 acgcttcttc cagatgcgga tagcccgaaa gcacaaagct gtcgatgcca agcgcggcgt
    14161 attcgttgat tcgcgcagcg accgtaggac catcgcccac cagcgccgtt ccggcaccgc
    14221 cgcgcactaa gccaacgccc gcccataaat tggggctgat ctccagattg tcgcgcttgc
    14281 cgttatgtaa cgccgccatt cgctgttgtc ctacggaatc cgtccgggcg aatgcggcct
    14341 gtgctttggc gatagtttca tcatcaagat gcgagattaa ccgctcggcg gcctgccacg
    14401 cttcgtcgtt agtttcacga acaatcacat gcagacgaat accgaaacga attttgcgtc
    14461 catgcgcggc agctttcgcc cgcacttgtt cgatcttctc ttttactagt tctggcggtt
    14521 cgccccaggt gaggtagaga tcaacttgtt ctgccgccag ctcctgggcg acgtctgacg
    14581 atccgccaaa gtaaagcgga ggataaggct gttgaatcgg cgggaagagc agttttgctc
    14641 cgcgcacatg aatatgttta ccgttgaaat tgacggtttc ccccagcaat aagcgccgcc
    14701 agacctaggt aaattccgcc gaggcttcgt agcgctcgct atgatcaagg aacacgccgt
    14761 cgcctgccag ctcttgtgga tcgctgcctg tgaccagatt aaacaacgca cgaccatttg
    14821 agagacggtc aagcgtggcg gcctggcgag cggcaacggt aggtgaggtt acgctggggc
    14881 gcagggcgac aagaaacttc agccgctgcg tcaccgggat catcgacgcc gccaccagcc
    14941 acgcatcttc acacgatcgc cccgttggga tcagcacacc ggtatagccc agacgatccg
    15001 ccgcttgcgc aatttgttgc agataaccgt gatcaaccgg gcgtgaacct tcttccgttc
    15061 ccagatagtg cccgtcaccg tgggtcggta aaaaccagaa catattcaga ctcataattg
    15121 ttttccttcc agttgagtgg gctgccagat gcgctggcga atatcgactt ttttcggcac
    15181 cagacgattt tcataaaaca gatctgccgt ttgctgctgt aaggcggcaa cctcggcgtt
    15241 aaccggtttg atggtggtag gagggcgatg atctaagtaa gaggcaatca ccggtgccgg
    15301 taagcccatc gtttttgcca gtaaagcgat gctttgctcg cgctggctgc gggttaacgc
    15361 atcggcctca ctaaaggttg ccagtacgcc ctgaataaaa gcgccgtttt tttctgcata
    15421 gggacgagct gccagataaa acgatccagt ttgattgaga tcggtgccgt ctttcagcac
    15481 ccgcacgccg ccctgtaata atgcagcaga gtagtaggga tcccagatag cccaggcgtc
    15541 aacgttacct tgctggaacg cggcgcgggc atcagcgggc gtcaggtaag tgggttggat
    15601 atcggtaaac ttaagtccgg cctgacgcag tgcacgcagt aaaaggttgt gtgaactgga
    15661 acctttctga aaggcaactt tgtgaccttt aagatcggct acggttttga tcgggctgtt
    15721 ttctgccacc agaatcactt cggctttggg cttcggtggc tcgacgccca catataccaa
    15781 atcagccccg gcagcctggg caaagattgg cggaatatcc ccggtactgc cgagatcaat
    15841 actgccaacg tttaaggctt ccaacatttg cggacccgcg gggaactcca cccaggagat
    15901 ttttgattgc ggatagcgtt tttccagtaa ctggtggctt tttgccagta ccataccaat
    15961 actgcctttc tgatagccta tacataacgc ttcaggcgag gattctgcag caaccgcaat
    16021 cgtagagacg ctaagcaatc ccaccagcgc cagtttaatg atgttacgca tgggcattac
    16081 ctcgcagaga cagaaggtca ggaacctgaa catcgcggcg gtgcaatgcc tgccagaaag
    16141 tttctagcgc ggtatcaaga cgggtttgca gatttggcgt gaactggggt ctgtgatggt
    16201 aatcaattac ttgtgagtca tcggcaaaca cgccgtgcag gatctcctga gctttcagtg
    16261 cgcttaaaac tggtttaagg gcataatcga ccgccagcag atgggccacg gtaccgcccg
    16321 tcgccagcgg tagcaccact ttgccttgca aagcgcgctc tggcagcagg tcgagcaggg
    16381 ttttcagcgc gccggaatag gcggctttat acacaggtgt agcgactatc agtccatcag
    16441 cctgttgcag ctgttcggtg aaggtcttga gtgccggact atcgaaacga gcataaagca
    16501 gatcttccgg gacgaagttt tgcagattcc agtgataaac ctctacatcc aggccattta
    16561 gtttttcccg cgcatattcc agcaaggagc tggagcgaga aggaaagcga ggactacccg
    16621 ccagggtgat gacacgcata ctctctcctt ataaccaatt gttctttttt tgttaacatt
    16681 gataacaatt cggtcagtct gtcggagaga caagaaaatg ccaaatataa attttgtgta
    16741 tctttttctg aaaataaact aaagaaaggg ctttatatat cacgcatatt tatttgttgg
    16801 atagtcatta gatgttgaat caatgaatta ctcgttcagt taatatttaa atattcatga
    16861 aatctataaa ttaaagattt gtcacttatt ggatttagta tttttgattt aaatgacggt
    16921 caattattgt tattattaag tctaatgtca tttaaaggca ttatcatatt tacgaagaga
    16981 tcaggatgat gacgatgaaa aaaagtgtat tgacggcgtt tataactgtg gtatgtgcaa
    17041 cgtccagcgt tatggcagct gatgataatg ctatcacgga tggcaaagta acatttaatg
    17101 gtaaagttat tgctccagct tgtaccctgg tagctgcgac gaaagattca gtagtcacat
    17161 tgccaaatgt cagcgccacc aagttgcaaa ctaatggagc agtctctggc gttaaaactg
    17221 atgtaccaat tgccttagaa ggctgtgatg ttactgtaac taaaaatgcg acgtttacct
    17281 ttagtggtac ggctgacggc gtgcaaccta cagcatttgc caaccaggct accaccgatg
    17341 cagc
//
LOCUS       DADMJE010000085        17104 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.086, whole genome shotgun sequence.
ACCESSION   DADMJE010000085 DADMJE010000000
VERSION     DADMJE010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 17104)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17104)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17104
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.086"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..303)
                     /gene="hlyE"
                     /locus_tag="JN001_002482"
     CDS             complement(<1..303)
                     /gene="hlyE"
                     /locus_tag="JN001_002482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin HlyE"
                     /protein_id="HAY9053678.1"
                     /translation="MTEIVADKMVEVVKNAIETADGALDLYNKYLDQVIPWQTFDETI
                     KELSRFKQEYSQAASVLVGDIKTLLMDSQDKYFEATQTVYEWCGVATQLLAAYILLF"
     gene            676..1095
                     /gene="umuD"
                     /locus_tag="JN001_002483"
     CDS             676..1095
                     /gene="umuD"
                     /locus_tag="JN001_002483"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translesion error-prone DNA polymerase V
                     autoproteolytic subunit"
                     /protein_id="HAY9053679.1"
                     /translation="MLFIKPADLREIVTFPLFSDLVQCGFPSPAADYVEQRIDLNQLL
                     IQHPSATYFVKASGDSMIDGGISDGDLLIVDSAITASHGDIVIAAVDGEFTVKKLQLR
                     PTVQLIPMNSAYSPITISSEDTLDVFGVVIHVVKAMR"
     gene            1095..2362
                     /locus_tag="JN001_002484"
                     /pseudo
     CDS             1095..2362
                     /locus_tag="JN001_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415702.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
     gene            complement(2408..2938)
                     /gene="dsbB"
                     /locus_tag="JN001_002485"
     CDS             complement(2408..2938)
                     /gene="dsbB"
                     /locus_tag="JN001_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein DsbB"
                     /protein_id="HAY9053680.1"
                     /translation="MLRFLNQCSQGRGAWLLMAFTALALELTALWFQHVMLLKPCVLC
                     IYERCALFGVLGAALIGAIAPKTPLRYVAMVIWLYSAFRGVQLTYEHTMLQLYPSPFA
                     TCDFMVRFPEWLPLDKWVPQVFVASGDCAERQWDFLGLEMPQWLLGIFIAYLIVAVLV
                     MISQPFKAKKRDLFGR"
     gene            complement(3084..4625)
                     /gene="nhaB"
                     /locus_tag="JN001_002486"
     CDS             complement(3084..4625)
                     /gene="nhaB"
                     /locus_tag="JN001_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter NhaB"
                     /protein_id="HAY9053681.1"
                     /translation="MEISWGRALWRNFLGQSPDWYKLALIIFLIVNPLIFLISPFVAG
                     WLLVAEFIFTLAMALKCYPLLPGGLLAIEAVFIGMTSAEHVREEVAANLEVLLLLMFM
                     VAGIYFMKQLLLFIFTRLLLSIRSKMLLSLSFCVAAAFLSAFLDALTVVAVVISVAVG
                     FYGIYHRVASSRTEDTDLQDDSHIDKHYKVVLEQFRGFLRSLMMHAGVGTALGGVMTM
                     VGEPQNLIIAKAAGWHFGDFFLRMSPVTVPVLICGLLTCLLVEKLRWFGYGETLPEKV
                     REVLQQFDDQSRHQRTRQDKIRLIVQAIIGVWLVTALALHLAEVGLIGLSVIILATSL
                     TGVTDEHAIGKAFTESLPFTALLTVFFSVVAVIIDQQLFSPIIQFVLQASEHAQLSLF
                     YIFNGLLSSISDNVFVGTIYINEAKAAMESGAITLKQYELLAVAINTGTNLPSVATPN
                     GQAAFLFLLTSALAPLIRLSYGRMVWMALPYTLVLTLVGLLCVEFTLAPVTEWFMQMG
                     WIATL"
     gene            4847..5566
                     /gene="fadR"
                     /locus_tag="JN001_002487"
     CDS             4847..5566
                     /gene="fadR"
                     /locus_tag="JN001_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid metabolism transcriptional regulator
                     FadR"
                     /protein_id="HAY9053682.1"
                     /translation="MVIKAQSPAGFAEEYIIESIWNNRFPPGTILPAERELSELIGVT
                     RTTLREVLQRLARDGWLTIQHGKPTKVNNFWETSGLNILETLARLDHESVPQLIDNLL
                     SVRTNISTIFIRTAFRQHPDKAQEVLATANEVADHADAFAELDYNIFRGLAFASGNPI
                     YGLILNGMKGLYTRIGRHYFANPEARSLALGFYHKLSALCSEGAHDQVYETVRRYGHE
                     SGEIWHRMQKNLPGDLAIQGR"
     gene            complement(5618..7150)
                     /locus_tag="JN001_002488"
     CDS             complement(5618..7150)
                     /locus_tag="JN001_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoVR family protein"
                     /protein_id="HAY9053683.1"
                     /translation="MATIDSMNKDTTRLSDGPDWTFDLLDVYLAEIDRVAKLYRLDTY
                     PHQIEVITSEQMMDAYSSVGMPINYPHWSFGKKFIETERLYKHGQQGLAYEIVINSNP
                     CIAYLMEENTITMQALVMAHACYGHNSFFKNNYLFRSWTDASSIVDYLIFARKYITEC
                     EERYGVDEVERLLDSCHALMNYGVDRYKRPQKISLQEEKARQKSREEYLQSQVNMLWR
                     TLPKREEEKTVAEARRYPSEPQENLLYFMEKNAPLLESWQREILRIVRKVSQYFYPQK
                     QTQVMNEGWATFWHYTILNHLYDEGKVTERFMLEFLHSHTNVVFQPPYNSPWYSGINP
                     YALGFAMFQDIKRICQSPTEEDKYWFPDIAGSDWLETLHFAMRDFKDESFISQFLSPK
                     VMRDFRFFTVLDDDRHNYLEISAIHNEEGYREIRNRLSSQYNLSNLEPNIQIWNVDLR
                     GDRSLTLRYIPHNRAPLDRGRKEVLKHVHRLWGFDVMLEQQNEDGSVELLERCPPRMG
                     NL"
     gene            7480..8778
                     /locus_tag="JN001_002489"
     CDS             7480..8778
                     /locus_tag="JN001_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino acid dehydrogenase"
                     /protein_id="HAY9053684.1"
                     /translation="MRVVILGSGVVGVASAWYLNQAGHEVTVIDREPGAALETSAANA
                     GQISPGYAAPWAAPGVPLKAIKWMFQRHAPLAVRLDGTQFQLKWMWQMLRNCDTSHYM
                     ENKGRMVRLAEYSRDCLKALRAETNIQYEGRQGGTLQLFRTEQQYENATRDIAVLEDA
                     GVPYQLLESSRLAEVEPALAEVAHKLTGGLQLPNDETGDCQLFTQNLARMAEQAGVKF
                     RFNTPVDQLLCDGEQIYGVKCGDEVIKADAYVMAFDSYSTAMLKGIVDIPVYPLKGYS
                     LTIPIAQEDGAPVSTILDETYKIAITRFDNRIRVGGMAEIVGFNTELLQPRRETLEMV
                     VRDLYPRGGHVEQATFWTGLRPMTPDGTPVVGRTRFKNLWLNTGHGTLGWTMACGSGQ
                     LLSDLLSGRTPAIPYEDLSVARYSRGFTPSRPGHLHGAHS"
     gene            8846..9847
                     /gene="dadX"
                     /locus_tag="JN001_002490"
     CDS             8846..9847
                     /gene="dadX"
                     /locus_tag="JN001_002490"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolic alanine racemase DadX"
                     /protein_id="HAY9053685.1"
                     /translation="MSARPRRTRVVKANAYGHGIERIWSALGATDGFALLNLEEAITL
                     RERGWKGPILMLEGFFHAQDLEIYDQHRLTTCVHSNWQLKALQNARLKAPLDIYLKVN
                     SGMNRLGFQPDRVLTVWQQLRAMANVGEMTLMSHFAEAEHPDGISSAMARIEQAAEGL
                     ECRRSLSNSAATLWHPEAHFDWVRPGIILYGASPSGQWRDIANTGLRPVMTLSSEIIG
                     VQTLKAGERVGYGGRYTARDEQRIGIVAAGYADGYPRHAPTGTPVLVDGVRTMTVGTV
                     SMDMLAVDLTPCPQAGIGTPVELWGKEIKIDDVAAAAGTVGYELMCALALRVPVVTV"
     gene            complement(10234..11970)
                     /locus_tag="JN001_002491"
     CDS             complement(10234..11970)
                     /locus_tag="JN001_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309713.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium/proton antiporter"
                     /protein_id="HAY9053686.1"
                     /translation="MDATTIISLFILGSILVTSSILLSSFSSRLGIPILVIFLAIGML
                     AGVDGVGGIPFDNYPFAYMVSNLALAIILLDGGMRTQASSFRVALGPALSLATLGVLI
                     TSGLTGMMAAWLFNLDLIEGLLIGAIVGSTDAAAVFSLLGGKGLNERVGSTLEIESGS
                     NDPMAVFLTITLIAMIQQHESSVSWMFVVDILQQFGLGIVIGLGGGYLLLQMINRIAL
                     PAGLYPLLALSGGILIFALTTALEGSGILAVYLCGFLLGNRPIRNRYGILQNFDGLAW
                     LAQIAMFLVLGLLVNPSDLLPIAIPALILSAWMIFFARPLSVFAGLLPFRGFNLRERV
                     FISWVGLRGAVPIILAVFPMMAGLENARLFFNVAFFVVLVSLLLQGTSLSWAAKKAKV
                     VVPPVGRPVSRVGLDIHPENPWEQFVYQLSADKWCVGAALRDLHMPKETRIAALFRDN
                     QLLHPTGSTRLREGDVLCVIGRERDLPALGKLFSQSPPVALDQRFFGDFILEASAKYA
                     DVALIYGLEDGREYRDKQQTLGEIVQQLLGTAPVVGDQVEFAGMIWTVAEKEDNEVLK
                     IGVRVAEEEAES"
     gene            complement(12065..12979)
                     /gene="ldcA"
                     /locus_tag="JN001_002492"
     CDS             complement(12065..12979)
                     /gene="ldcA"
                     /locus_tag="JN001_002492"
                     /EC_number="3.4.17.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="muramoyltetrapeptide carboxypeptidase"
                     /protein_id="HAY9053687.1"
                     /translation="MSLFHLIAPSGYSIKQHAALRGIQRLTDAGHQVNNVEVIARRCE
                     RFAGTETERLEDLNSLARLTTPNTIVLAVRGGYGASRLLADIDWQALVARQQHDPLLI
                     CGHSDFTAIQCGLLAQGNVITFSGPMLVANFGADELNAFTEHHFWLALRNKTFTIEWQ
                     GEGPTCQTEGTLWGGNLAMLISLIGTPWMPKIENGILVLEDINEHPFRVERMLLQLYH
                     AGILPRQKAIILGSFSGSTPNDYDAGYNLESVSAFLRSRLSIPLITGLDFGHEQRTVT
                     LPLGAHAILNNTREGTQLTISGHPVLKM"
     gene            13079..13690
                     /gene="emtA"
                     /locus_tag="JN001_002493"
     CDS             13079..13690
                     /gene="emtA"
                     /locus_tag="JN001_002493"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309714.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane-bound lytic murein transglycosylase
                     EmtA"
                     /protein_id="HAY9053688.1"
                     /translation="MKLRWFAFLIVLLAGCSSKHDYTNPPWNAKVPVQRAMQWMPISQ
                     KAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGEP
                     TTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSD
                     RKKAISKINDLDADEFLDHVARNHPAPQAPRYIYKLEQALDAM"
     gene            complement(13692..14426)
                     /locus_tag="JN001_002494"
     CDS             complement(13692..14426)
                     /locus_tag="JN001_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar brake protein"
                     /protein_id="HAY9053689.1"
                     /translation="MSHYHEQFLKQNPLAVLGVLRDLHKAAIPLRLSWNGGQLISKIL
                     AITPDKLVLDFGSQAEDNIAVLKAQHITITAETQGAKVEFTVEQLQQSEYLQLPAFIT
                     VPPPTLWFVQRRRYFRISAPLHPPYFCQTKLADNSTLRFRLYDLSLGGMGALLETAKP
                     AELQEGMRFAQIEVNMGQWGVFHFDAQLISISERKVIDGKNETITTPRLSFRFLNVSP
                     TVERQLQRIIFSLEREAREKADKVRD"
     gene            14627..14881
                     /locus_tag="JN001_002495"
     CDS             14627..14881
                     /locus_tag="JN001_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY9053690.1"
                     /translation="MGIIAWIIFGLIAGIIAKLIMPGRDGGGFFQTCILGIVGAVVGG
                     WLATMFGIGGSISGFNLHSFLVAVVGAILVLGLFRLLRRE"
     gene            15060..15500
                     /locus_tag="JN001_002496"
     CDS             15060..15500
                     /locus_tag="JN001_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053691.1"
                     /translation="MIQKINILDSSQSGVKNGADSEAVLAALIEHLELINPSGRLSQN
                     TRSAMLQLREEEWSEFFFWLLNSLECLDYVIINLTPESKKTLMSEHRNNIQVAIDALY
                     RQRRCKSPGDDSETLTRRNDAIFGNHVWQTFAQYFPPGLEKPAV"
     gene            complement(15579..16924)
                     /gene="treA"
                     /locus_tag="JN001_002497"
                     /pseudo
     CDS             complement(15579..16924)
                     /gene="treA"
                     /locus_tag="JN001_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001420363.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-trehalase TreA"
BASE COUNT         4310 a         4224 c         4422 g         4148 t
ORIGIN      
        1 aaatagcaaa atatacgctg cgagcaattg cgtcgcaaca ccacaccatt catacactgt
       61 ttgggttgct tcaaaatact tatcctggct atccataagt aaggttttaa tatcgccgac
      121 taaaacggag gctgcctgtg aatactcctg tttaaagcga cttaactctt ttatggtttc
      181 atcaaaggtc tgccagggga tgacctgatc gagatattta ttataaagat ctaatgctcc
      241 atctgcggtt tcgattgcgt ttttaactac ttctaccatt ttatctgcaa cgatttcagt
      301 cataatcatt cgcctcttta aatatataaa ttgtaatgaa actcctgttt tacaactatt
      361 aataaatttt acttcatcta attcatagtt agccgggtgg gatgcgtcaa tgtctttatt
      421 tctattaata tgataaatat caaacaatgt ttaatgtcat tatggcgaat gcttctattc
      481 tatttttttg ccgggtgata tttttcattt ctgctggatg agcgtcgtcg ccagaaggcc
      541 acgtgagcac aggataagag aacgaaaaat cagcagtcta tacagcgaca aatattgata
      601 gcctgaatca gtattgatct gctggcaaga atagactact gtatataaaa acagtataac
      661 ttcaggcaga ttattatgtt gtttatcaag cctgcggatc tccgcgaaat tgtgactttt
      721 ccgctattta gcgatcttgt tcagtgtggc tttccttcac cggcagcaga ttacgtcgaa
      781 cagcgcatcg atctgaatca actgttgatc cagcatccca gcgcgactta cttcgtcaaa
      841 gcaagtggtg attctatgat tgatggtgga attagtgacg gtgatttact gattgtcgat
      901 agcgctatta ccgccagcca tggtgatatt gtcatcgctg ctgttgacgg cgagtttacg
      961 gtgaaaaaat tgcaactacg cccgacggta cagcttattc ccatgaacag tgcgtactcg
     1021 cccattacca tcagtagcga agatacgctg gatgtctttg gtgtggtgat ccacgtcgtt
     1081 aaggcgatgc gctgatgttt gctctctgtg atgtaaacgc gttttatgcc agctgtgaga
     1141 cggtgtttcg ccctgattta tggggtaaac cggtggttgt actatcgaat aatgacggtt
     1201 gcgttatcgc ccgaaacgct gaggcaaagg cgctgggtgt taaaatgggc gatccctggt
     1261 tcaaacaaaa agatctgttt cgtcgctgtg gtgtggtttg ctttagcagc aattatgagc
     1321 tttacgcaga catgagcaat cgggttatgt cgacgctgga agaactatcg ccccgcgtcg
     1381 agatttacag tattgatgag gcattctgcg atctgacagg tgtgcgtaat tgtcgcgatc
     1441 tgactgattt tggcagagaa attcgcgcaa cggtgctaca acgtacccat cttactgttg
     1501 gtgtggggat cgcccagacc aaaacgctgg ctaagcttgc caatcatgcg gcaaaaaaat
     1561 ggcagcggca gacggggggg tggtggattt atcaaatctg gaacgccagc gtaaattaat
     1621 gtctgctctc cccgtggatg acgtctgggg gattggacgg cggatcagca aaaaactgga
     1681 cgcgatgggg atcaaaaccg ttcttgattt ggcggataca gatatccggt ttatccgtaa
     1741 acattttaat gtcgtgctcg aaagaacggt gcgtgaactg cgcggtgaac cctgtttgca
     1801 actggaagaa tttgcaccga caaagcagga aattatctgt tcccgctcgt ttggtgaacg
     1861 tatcacggat tatacgtcga tgcggcaggc catttgtagt tacgctgccc gggcggcgga
     1921 aaaacttcgc agtgagcatc aatattgtcg gtttatctcc acatttatta agacgtcacc
     1981 atttgcgctc aatgaacctt attacggcaa tagcgcgtcg gtaaaactgc tgacgcccac
     2041 tcaggacagc agggatatca ttaacgccgc tacgcgatct ctggatgcca tctggcaagc
     2101 gggccatcgc taccaaaaag cgggcgtgat gctgggggat ttcttcagtc agggagtcgc
     2161 gcagctcaat ttattcgatg acaacgcacc gcgccccggg agtgagcaat tgatgacggt
     2221 aatggataca ctgaatgcta aagagggcag aggaacactc tattttgccg ggcaggggat
     2281 ccaacaacaa tggcagatga agcgagccat gctttcacca cgttatacaa cgcgaagttc
     2341 tgatttactg cgggtcaaat aaatatagcg gcaggaaaaa agtgctcccg caggagcgcc
     2401 gaatggatta gcgaccgaac agatcacgtt ttttcgcttt aaacggctgg gaaatcatca
     2461 ccagcaccgc gacaatcagg taagcgataa aaataccgag cagccactgc ggcatttcca
     2521 gacctaaaaa atcccactga cgctcggcgc aatcgccaga ggcgacaaac acttgcggca
     2581 cccatttatc cagcggcagc cattccggga aacgaaccat aaaatcacag gtggcaaacg
     2641 gcgaaggata gagctgaagc atggtgtgct cgtaagttaa ctgcacaccg cggaacgcac
     2701 tatacaacca gataaccatc gctacataac gcagcggagt tttcggggcg atcgcgccaa
     2761 tcagcgcagc acccagaacg ccgaataacg cgcagcgttc ataaatacag agcacgcaag
     2821 gtttcagtaa catcacatgc tggaaccaca gcgccgtcag ttccagtgcc agagcagtaa
     2881 acgccatcaa cagccacgcg ccccggcctt gtgaacattg gttcaaaaat cgcaacataa
     2941 tcatttccct gcaatatgca tagagtgcgc agtttaaacc aattcattcg ctgcgccacc
     3001 aggaggcagc aaaaatagga cgcaattgga caattatcgg gcgaaaaggc aaaccgggca
     3061 tttatatgcc cggtaagttg ttatcaaagc gttgctatcc agcccatttg cataaaccat
     3121 tcggttacag gggcaagcgt aaactcgacg cagagcagcc cgacgagtgt caggacgagg
     3181 gtgtaaggca gggccatcca caccatgcgg ccataagaga ggcgaatcaa tggcgcgagt
     3241 gcagaggtca gcaggaacag gaacgcagcc tgaccgttcg gcgtagcgac agagggcaga
     3301 ttggtaccgg tattaatggc gaccgccagc agctcgtatt gcttcaacgt gatagcgcca
     3361 ctttccattg ccgctttcgc ttcgttgata taaatcgtcc ccacgaagac gttatccgaa
     3421 atggatgaca gcagaccgtt gaaaatatag aacaacgaca gctgagcatg ttccgatgcc
     3481 tgcaacacaa actgaataat cggcgaaaac agttgttggt cgataatcac cgcgactacc
     3541 gagaaaaaca ccgtcaacag tgcggtgaat ggcagagatt cggtgaaggc tttaccgata
     3601 gcatgttcat cggtgacacc ggtcaatgat gtcgccagaa taatgaccga caaaccaatc
     3661 aagccaacct ccgccagatg caacgccagc gcagtcacca gccagacgcc gataatcgcc
     3721 tggacaatca gacggatttt atcctgacgg gtacgctggt ggcggctttg atcgtcaaac
     3781 tgttgcaaca cttcgcggac tttctccggc agcgtttcac cgtagccaaa ccaacgcagc
     3841 ttctctacca gcaggcaggt taacaggcca caaatcagaa ccggaacggt caccggcgac
     3901 atgcgcagga agaaatcgcc aaaatgccag ccagccgctt tagcgatgat caggttctgt
     3961 ggttcgccca ccatggtcat tacgccgcct aatgcggtgc cgacaccggc atgcatcatc
     4021 aggctacgca gaaagccacg gaactgttcc agaaccactt tgtaatgctt gtcgatatga
     4081 ctatcgtctt gcaggtcggt atcttcagta cgggaagagg ctacgcggtg ataaatacca
     4141 taaaaaccga ctgcaacgct gatcaccacc gccacgacgg ttaaggcatc gaggaacgcg
     4201 gagaggaacg ccgccgccac gcaaaaagag agcgacagca gcattttgga acgaatgctt
     4261 aacagcaaac gggtaaatat gaacagcaat agctgtttca taaaatagat acccgccacc
     4321 ataaacatca gtaacagcaa gacttcaaga tttgccgcca cctcttcacg gacgtgttcc
     4381 gcgctggtca tgccgatgaa taccgcttca atagccaaca gaccaccggg gagtagcggg
     4441 tagcatttca gggccatcgc cagagtgaaa ataaattccg ctaccagcaa ccagccagcg
     4501 acgaaagggc tgatgaggaa aattaacgga tttacgatta agaaaatgat gagggcgagt
     4561 ttgtaccagt cgggggactg gcccaaaaaa ttgcgccata gcgcgcggcc ccaggagatc
     4621 tccatgatgg tttcccttac cttacaaata atcaatgatg tttttatgtt taaacgcaaa
     4681 gcttaacggt caggcaggag tgaggcaagt cttgatagtc aaggggaaag agatgcggaa
     4741 aatgaagcct tgatcccttt tttcttcttt ttgtctgcta tcagcgtagt tagccctctg
     4801 gtatgatgag tccaactttg ttttgctgtg ttatggaaat ctcactatgg tcattaaggc
     4861 gcaaagcccg gcgggtttcg cggaagagta cattattgaa agtatctgga ataaccgctt
     4921 ccctcccggg actattttgc ccgcagaacg tgaactttca gaattaattg gcgtaacgcg
     4981 tactacgtta cgtgaagtgt tacagcgtct ggcacgagat ggctggttga ccattcaaca
     5041 tggcaagccg acgaaggtga ataatttctg ggaaacctct ggtttaaata tccttgaaac
     5101 actggcgcga ctggatcacg aaagtgtgcc gcagcttatt gataatttgc tgtcggtgcg
     5161 taccaatatt tccactattt ttattcgcac cgcgtttcgt cagcatcccg ataaagcgca
     5221 ggaagtgctg gctaccgcta atgaagtggc cgatcacgcc gatgcctttg ccgagctgga
     5281 ttacaacata ttccgcggcc tggcgtttgc ttccggcaac ccgatttacg gtctgatcct
     5341 taacgggatg aaagggctgt atacgcgcat tggtcgtcac tatttcgcca atccggaagc
     5401 gcgcagtctg gcgctgggct tctaccacaa actgtcggcg ttgtgcagtg aaggcgcgca
     5461 cgatcaggtg tacgaaacag tgcgtcgcta tgggcatgag agtggcgaga tttggcaccg
     5521 gatgcagaaa aatctgccgg gtgatttagc cattcagggg cgataatccc ttccgtttaa
     5581 aaagcaaacc cctcaaacga ggggtttttt gttgttttta cagatttccc attcttggcg
     5641 ggcaacgttc cagcaactcg acgctgccat cttcgttttg ctgttccagc atcacatcaa
     5701 atccccacag gcgatgcaca tgcttcagca cttctttgcg cccccgatcc agcggtgcgc
     5761 gattatgtgg aatgtaacgc agcgtcagcg aacggtcgcc gcgcaaatcc acgttccaga
     5821 tctgaatatt cggctccaga ttacttaagt tatattgcga cgataaccgg ttacggatct
     5881 cccgataacc ttcttcatta tgaatagcgg aaatctccag ataattatgc cgatcgtcat
     5941 ccagcacggt gaagaagcgg aaatcacgca tcactttcgg tgacagaaac tggctgataa
     6001 aactctcatc tttgaaatca cgcatcgcga aatgcagcgt ttccagccag tcggaaccgg
     6061 cgatatccgg gaaccagtat ttgtcttctt ccgttggcga ctgacaaatc cgtttaatat
     6121 cctggaacat ggcgaacccg agggcatacg ggttgatgcc gctgtaccac gggctgttat
     6181 aggggggctg gaagaccaca ttggtgtggc tgtgcaaaaa ctccagcata aaacgttccg
     6241 ttactttccc ttcatcatac agatggttaa ggatggtgta gtgccagaag gtggcccagc
     6301 cttcgttcat cacctgagtc tgtttttgcg gataaaaata ctggctcacc ttacgcacaa
     6361 tacgcaggat ttcacgctgc catgattcca gcagtggcgc atttttctcc ataaaataga
     6421 gcaggttttc ttgtggttcg gacggatagc ggcgcgcttc agcaaccgtt ttctcttcct
     6481 cgcgcttcgg cagggtacgc cagagcatat tgacctgact ttgtagatac tcttcgcgac
     6541 ttttctgccg ggctttctct tcttgcagcg agattttttg cgggcgtttg taccggtcca
     6601 cgccgtagtt catcagcgcg tggcacgagt ccagaagccg ttctacttca tccacgccat
     6661 aacgttcttc gcactcggta atatatttac gggcaaaaat cagataatcg acaatcgaac
     6721 tggcgtcggt ccaactgcgg aataagtaat tgtttttaaa gaaagagtta tgcccatagc
     6781 aggcgtgtgc catcaccagc gcttgcatgg taatggtgtt ctcttccatc aggtaagcga
     6841 tacacgggtt agagttaatg acgatttcat aggccagtcc ttgctgaccg tgcttataca
     6901 gccgttcagt ctcgataaac tttttaccga atgaccagtg cggatagtta attggcatgc
     6961 cgacgctgga gtaggcatcc atcatctgtt ctgaggttat cacttcaatc tggtgcgggt
     7021 aggtatccag ccggtagagt ttcgccaccc ggtctatctc tgccagataa acatccagca
     7081 ggtcgaacgt ccagtcgggt ccatcgctca accgtgtggt gtccttattc atagaatcga
     7141 tcgtcgccat acgcgcacct cattgttgtc ggcgctctct gtgtggagca cctcatttca
     7201 agcatagaac acctgttaaa aaccgcgtcg ccggagaatt tttttctttg cgatttctta
     7261 ttatcagagt gccactaatc cgcttctgaa cggaatttta tgctggataa aaagggcgtt
     7321 cagcaggaga tactaaagac gccatattgc cgcagagtca gggagatgtg agccagctca
     7381 ccataaaaaa gctgtatgtt gaataatatt ttcaactgag ttatcaagat gtaattagat
     7441 tattattctt ttactgtatc taccgttatc ggagtggcta tgcgagttgt catactggga
     7501 agtggtgtgg taggcgttgc cagcgcctgg tacttaaatc aggcaggaca tgaggtcacc
     7561 gtcattgatc gggagccggg ggccgccctg gaaaccagcg ccgcgaatgc cgggcaaatc
     7621 tcccccggat atgctgcacc gtgggcggca ccaggtgtgc ctttaaaagc gatcaaatgg
     7681 atgttccagc gccatgcgcc gctggcggtt cgtctcgacg gtacgcagtt tcagttgaaa
     7741 tggatgtggc aaatgttacg taactgcgac accagccact acatggaaaa caaagggcgg
     7801 atggtgcgtc tggcggaata cagccgtgat tgcctgaaag cattgcgcgc cgaaaccaat
     7861 attcagtatg aagggcgtca gggtgggacg ctgcaactgt tccgtaccga acaacagtat
     7921 gaaaatgcga cccgcgatat cgccgtgctg gaagatgccg gcgtaccgta tcagctgctg
     7981 gaatccagcc gcctggcgga agtggagcca gcgctggcag aagtagcgca caaactgacg
     8041 ggtggtctgc aactgcccaa tgatgaaacc ggagactgcc agctgtttac ccagaatctg
     8101 gcgcggatgg cagagcaggc gggggttaaa ttccgcttta atacgcccgt tgaccaactg
     8161 ctttgcgacg gcgagcaaat ctacggcgtg aagtgtggcg atgaagtgat taaggccgat
     8221 gcgtatgtga tggcgtttga ttcttactcg acggcgatgc tcaaaggcat tgttgatatt
     8281 ccggtgtatc cgctgaaagg ctactcgctg actattccaa ttgcgcagga agatggtgcg
     8341 ccagtatcca ccattcttga tgaaacctac aaaatcgcca ttacccgttt cgataaccgc
     8401 attcgtgttg gcggaatggc ggaaattgtt ggttttaaca ccgagctgtt gcaaccgcgt
     8461 cgtgaaacgc tggaaatggt ggttcgcgat ctctatccac gcggcggtca tgtcgagcag
     8521 gcgactttct ggacgggttt gcgcccgatg acgccagacg gtacgccggt tgtcgggcgt
     8581 acacgcttta aaaatctgtg gctgaatacc ggtcacggca cgctcggctg gacgatggct
     8641 tgcggttccg gtcagttgtt aagcgatctg ctctctggtc gcacgccagc gatcccatat
     8701 gaggatctaa gcgtagcgcg ctacagccgt ggatttacgc catcacgtcc gggccattta
     8761 catggcgcac acagctaagg aaacgagatg acccgtccga tacaggccag cctcgatctg
     8821 caggcattaa aacagaatct gtccattgtc cgccaggccg cgccgcacgc gggtggtaaa
     8881 agcgaacgct tacgggcatg gtattgagcg tatctggagc gcgctcgggg ccaccgatgg
     8941 ctttgcatta cttaacctgg aagaggcaat aacgttacgt gagcgcggct ggaaggggcc
     9001 gatcctgatg ctggaaggat ttttccatgc tcaggatctg gagatttatg accagcaccg
     9061 cctgaccacc tgcgtacaca gcaactggca gctcaaagca ctgcaaaatg cgcggctaaa
     9121 agcaccgttg gatatttatc ttaaagtgaa cagtgggatg aatcggttgg gcttccagcc
     9181 cgatcgcgtg cttaccgtct ggcagcagtt gcgggcaatg gcgaatgttg gcgagatgac
     9241 cctgatgtcg cattttgccg aagcggaaca tcctgatgga atttccagcg cgatggcgcg
     9301 tattgagcag gcggcggaag ggctggagtg tcggcgttcg ttgtccaatt cggcggcgac
     9361 tctgtggcac ccggaagcgc attttgactg ggttcggcct ggcattattt tgtatggcgc
     9421 ttcgccgtcc ggtcagtggc gtgatatcgc caataccgga ttacgtccgg tgatgacgct
     9481 aagcagtgag attattggtg tccagacgct aaaagcgggt gagcgtgtgg gctacggcgg
     9541 tcgctatact gcgcgcgatg aacagcgaat cggcattgtc gccgcagggt acgccgacgg
     9601 ttatccgcgc cacgcgccta ccggtacccc tgttttagtg gacggcgtgc gcaccatgac
     9661 ggtggggacc gtctcgatgg atatgctggc ggtcgattta acgccttgcc cgcaggcggg
     9721 tattggtacg ccggttgagc tgtggggcaa ggagatcaaa attgatgatg tcgccgccgc
     9781 tgccggaacg gtgggctatg agttgatgtg cgcgctggcg ctacgcgtcc cggttgtgac
     9841 ggtgtaactt gttgtaagcc ggatcggagg caacgtcttc tgggtgcaaa aaaaatcatc
     9901 catccggctg gtcagcaact gtagttgtta atgtgacaga gccattgccc atgatagtgt
     9961 ccattaaaag gatggacact atttccccgg aacctgaact caccgcacag gcgttctaca
    10021 taaaacgctt acgcttcatt gttgactcgg agtcgacttc agataaatca cgctttaccc
    10081 ttgatggagc ctgtacatag atttgtgtaa ttgcctgatt ttgatatgtt caattcaaca
    10141 tcaaatgaag gttaaattat ggacgacaaa caattgcagg ctcaggctgc gttcagcaaa
    10201 gcatcgcaac cggcgataga tgcttcatta aatttaagat tcagcttcct cttcagccac
    10261 ccgtacgcca atcttcaaca cttcattatc ttctttctcg gccaccgtcc agatcatccc
    10321 ggcaaactct acctggtcac cgacaaccgg tgccgtgcct aacaactgct ggacaatttc
    10381 acccagcgtt tgctgcttat cacgatattc tcgcccgtct tccaggccat atatcagcgc
    10441 aacatcagca tatttggcgc tggcttcgag aatgaagtca ccaaagaagc gttgatccag
    10501 cgcgaccggc ggcgactggc tgaacagttt accgagcgcc ggaagatcgc gttcccgacc
    10561 aattacacac aacacatcgc cttcgcgcag tcgggtgctg ccggtaggat gaagcaactg
    10621 gttatcacga aacagtgccg caatacgcgt ctcttttggc atatgcaaat cgcgcagtgc
    10681 cgcgcccacg caccatttat cggcactcaa ttgataaaca aactgctccc acggattttc
    10741 cggatgaata tccaggccaa cgcgtgacac cggacgtccc actggcggaa ccaccacttt
    10801 ggctttttta gccgcccacg agagtgatgt tccctgcaag agcagtgaaa ccagaaccac
    10861 aaagaaggcg acattaaaga acagacgtgc attctccagc cccgccatca tcgggaacac
    10921 ggccaggatg attggcaccg cgccgcgtaa tcctacccag ctgataaaca cgcgctcacg
    10981 cagattgaaa ccgcggaagg ggagcaatcc agcaaatacc gaaaggggac gggcgaagaa
    11041 tatcatccat gccgacaaaa ttagcgccgg aatggcaata ggcagcagat cgcttgggtt
    11101 aaccaatagc cccagcacca ggaacatggc gatttgcgcc agccaggcga ggccgtcgaa
    11161 attttgcagg atgccgtagc ggttgcgaat cggccgatta cccagcagaa aaccgcacag
    11221 ataaacagcc agaataccgc tgccttccag cgccgtggtt aaagcaaaaa ttaaaatacc
    11281 gccgcttaat gccagcaatg gatataatcc ggcaggcagg gcgatgcgat taatcatttg
    11341 cagcagtaaa taaccaccgc caagtccgat gacaatcccg aggccaaatt gctgcagaat
    11401 atcgaccacg aacatccaac tgacactgct ttcatgttgc tggatcatcg caatcagggt
    11461 aatcgtcaga aagaccgcca ttggatcatt actgccggat tcaatttcca gcgtcgagcc
    11521 aacacgttcg ttaagcccct taccacccag cagagaaaag accgctgcag catcggtaga
    11581 gccgacgata gcgccgatta ataagccttc aatcaaatca agattaaaca gccacgccgc
    11641 catcatgccg gttaaaccag aggtgataag cacgcccagc gtcgccagcg acagtgccgg
    11701 tcctaacgcc acacgaaagg aactggcctg agtgcgcatc ccgccgtcga gcaaaataat
    11761 cgccagtgcc aggttactta ccatgtaggc gaaggggtaa ttatcaaacg ggataccgcc
    11821 gacgccatcg actcctgcca gcatgccgat cgccagaaaa ataaccagaa taggaatgcc
    11881 aagacgggaa gaaaatgaac taagtaatat actgctggtg acaaggatgg atcctaagat
    11941 gaaaaggcta attattgttg tggcatccaa cggtcggtta ctcctgatta cgctgtctct
    12001 tatataaacc ctaccatatt agcggcagag acagcgtttt acttagccct gaagcgtgat
    12061 ttttttacat tttaagaaca ggatgaccgc taatcgtcaa ctgagtgcct tcccgggtgt
    12121 tattcagaat ggcatgtgcg cccaacggca gcgtaaccgt gcgttgttca tgaccaaaat
    12181 cgaggccggt aatgagtgga atcgacaggc gggaacgcaa aaacgcggac actgactcca
    12241 ggttgtaacc tgcgtcataa tcattgggcg tgctgccgct aaagctaccg agaataatcg
    12301 ccttctgacg tggcaaaatt cccgcatgat agagctgcaa cagcatacgt tcgacgcgga
    12361 aagggtgctc gttaatatct tccagtacca ggataccgtt ctcaattttt ggcatccacg
    12421 gtgtaccaat cagtgaaatc agcatcgcaa gattgcctcc ccacaacgtg ccttcggtct
    12481 gacatgtcgg gccttcccct tgccattcaa tggtgaaggt tttattgcgt aacgccagcc
    12541 agaaatggtg ctcggtaaag gcgttcagtt catccgcacc aaagtttgct accagcatgg
    12601 ggccgctaaa ggtgatgaca ttgccttgcg ccagaagacc gcactgaatg gcggtaaaat
    12661 cgctatgtcc gcaaatgagt aacgggtcat gttgttggcg agccaccagt gcctgccagt
    12721 caatatctgc cagtaaacga ctggcaccgt aaccgccgcg tacagccagc acgatggtgt
    12781 tgggtgtagt cagtctggca agggaattga gatcttccag acgctccgtt tccgtacccg
    12841 caaaacgctc acaacgacgg gcaataacct cgacgttatt gacttgatgc cccgcgtcgg
    12901 taaggcgctg gataccacgc agcgcggcgt gctgtttaat gctgtaaccc gatggggcaa
    12961 ttaagtgaaa cagagacatg gcaattcctt gctgacaaca gaaacgaaat gtatatcatg
    13021 ccgcttaggt gtgccgttgt cacctcaacg gcgattccag gctataagga tagaagaagt
    13081 gaaattgaga tggtttgcct ttttgattgt gttattagcg ggttgttcat caaagcatga
    13141 ctatacgaac ccgccgtgga acgcgaaagt tccggtgcaa cgtgcgatgc agtggatgcc
    13201 aataagccag aaagccggtg cagcctgggg cgtcgatcca caattgatca cggcgattat
    13261 cgctatcgaa tcgggtggta atccgaacgc ggtgagtaaa tcgaatgcca ttggtttgat
    13321 gcagttaaaa gcttcaacct ccggacgtga tgtttatcgc cgtatgggct ggagtggtga
    13381 gccgacgacc agcgagctga aaaatccaga gcgtaatatt tcaatggggg cggcttacct
    13441 gaatattctg gaaaccggcc cgctggcagg cattgaagat ccgaaggtac tgcaatatgc
    13501 gctggtggtg tcatacgcta acggggcagg tgcgctgcta cggactttct cgtcagatcg
    13561 gaaaaaggcg atcagcaaaa tcaacgattt ggatgctgac gagttcctcg atcacgtagc
    13621 gcgcaatcat cctgcgccgc aggctccgcg ctatatctac aaacttgagc aggcactgga
    13681 cgcgatgtaa atcagtcgcg tactttgtcc gctttctccc gggcttcccg ctcgagagag
    13741 aaaataatcc gttgtaattg ccgctccacc gtcgggctga cgttaagaaa acggaagctc
    13801 agacggggag tggtgatggt ttcattcttg ccatcaatca ctttgcgctc gctgatggag
    13861 attaactggg cgtcaaagtg aaaaacaccc cattgcccca tgttgacttc aatctgagcg
    13921 aagcgcatgc cttcttgtaa ttcggcaggc tttgctgttt ccagtaatgc gcccatgccg
    13981 cctaacgaca aatcatacag gcggaaacgt aacgtactgt tatccgccag tttggtctgg
    14041 caaaaataag gcggatggag tggggcggag atgcggaaat atcggcgtcg ttgtacaaac
    14101 cataaggtgg gaggcggtac ggtaataaat gccggaagct gcaagtattc actctgctgt
    14161 agttgttcaa cagtaaactc gactttcgca ccctgagttt cggcggtaat ggtaatatgc
    14221 tgcgccttta gcacggcgat gttgtcttcg gcttgactgc cgaaatccag caccagttta
    14281 tccggggtta ttgccagtat tttgctgatc agctgcccgc cattccaact gagacgcaaa
    14341 ggaattgcgg ctttgtgcaa atcgcgtaac acgcccagga cggctaacgg attttgtttc
    14401 aggaactgct catggtaatg actcacgcgg aaaaactcct gactgacaaa ctgtctttgg
    14461 tttatcggtc acagttaaca aaacttaata caaatgcgtg aatatttttt acatgttgtt
    14521 cttaaatcag ccgacatacg cccagcatcg atcccgccct tgcctatact tagagcgttg
    14581 acgtaagcat ttcttgcgtc cgattcatcg aaacgagggc ttgaacatgg gaattattgc
    14641 ctggattatt tttggcctga tagccggcat tatcgccaag ctaatcatgc cggggcgtga
    14701 tggtggtgga tttttccaga cctgtattct cgggatagtc ggtgcggtgg tcggcggctg
    14761 gctggcgacc atgtttggca ttggcggctc catcagcggt tttaatttgc acagcttcct
    14821 ggtggcggtg gtgggagcta ttctcgttct gggcttattc cgcctgctgc gaagagaata
    14881 agattttcat aaggcggata gcgatacaga tgccgctatc cgcttttcac atcagaacgt
    14941 atattcgaca cctgctttac gggtgaaaaa aatcaatata gcacttcgat atccgataaa
    15001 gtcggttccc ggtaacaaca acagaatcct tttttaatta ttgtttcgtt gtttttggtg
    15061 tgattcagaa aataaatatt ttagacagta gccagtcagg cgttaaaaat ggggcggata
    15121 gtgaggcggt tttggctgcg cttattgaac atttagaatt gatcaatcct tctggcagat
    15181 taagccaaaa tacccgttcg gcaatgcttc agttacgcga agaggaatgg tctgaattct
    15241 ttttttggtt gctaaattct ctggagtgtc tggattatgt gattattaat ttaactccag
    15301 aaagcaaaaa aacgttgatg agtgaacacc gtaacaatat tcaggtagca atcgatgctt
    15361 tatataggca acgtcggtgt aaatcaccgg gggatgatag tgaaacactt acccgtagaa
    15421 atgacgctat cttcggcaac cacgtatggc aaacatttgc gcaatacttc ccgccaggac
    15481 ttgaaaaacc ggctgtgtag aaaacaccat agctatggtg ttatctgccg acaacgccat
    15541 ccggagaagc cgaatgacgt tgtcggagta agcgctggtt aaggtgtggg ttgtgcctct
    15601 ttggttgagg gttgcgtcgt tgctgactta acggtcggac gcgtcgccgg aacattgtca
    15661 cacggttgct ctttcgggca gatcaaatcc agcattttca gcgtcacgcc attggtccag
    15721 ccaaagccat cctgtaatgg atattcgcca cctctttttg cccgtagttt tgtaatcctt
    15781 ctgtcgcgac ccactgtaac ggtgcccagc catttggcgc atcccattgt tgcccacttt
    15841 tcaccgacgt ggtgttcagg ccgccgggtt gcagcagatg tgttttcgtc gccgtcgcca
    15901 ttttgttggc gcgatctttc gctgccgcat tgacgtacag cgggaacagg gcggccgcgg
    15961 ttaactgatt gcgcacttta tgacttttca ggtcgtaatc ggcataccag ccttgttgat
    16021 cgttccacag gtatttttcg attccttttt gacgggcatt cgccagcgtt tcgtactggt
    16081 ttgccatcgc gttatctcct gcagctttgc tggcgcgggc gaggattttt tccattttaa
    16141 acatcaggct gttcagatcg accggtacga tgctggtggt gcgtaaggta tttaactgct
    16201 gcgggttgtc catccagcgc gagctgaaat cccagccaga cgcagcggca gagcgcaggt
    16261 cgcggtaaat ttcagtggca ggtcgattcg gattgctttt ggcggtggca atatcttcca
    16321 cccatgactc tggtcgtggc gtatcgcgat cgtcccagta gcggttgaga agggtaccat
    16381 cctgaagttt gacaacgcgt ttttcctgtt gtccggcttg caggttttca acaccgtcca
    16441 tccagtaagc atattctttt tgcatttgcg gcaggtattg cttcaacgcg gcatcgcctt
    16501 catgctgcgc cagtaactct accatcaggg caaagaaggg cggttgcgag cggcttaaat
    16561 agtaactgcg gttgccgttg ggaatatgac cgtaagtgtc tatttcatga gcaaaattgg
    16621 ccaccatatc cgcgacttta tcccagtgac cgctttcggc aagtcctaac atggtgaagt
    16681 aactgtccca gtaatatacc tcgcgaaaac gtccgcccgg cacgacataa ggttccggca
    16741 gcggtaacag agaatcccat ttttcggtgt tttcggtaga acgcgttaat accggccaaa
    16801 gtccgtcaat atgttcgcgc agtgactgcc cctctggcgg aacatatttc tcgccttctt
    16861 tcggcagggt gaaattgacg ttaacgaaat ggcgcagatc aaatccgctc tggttttgct
    16921 gcatccgata atcagcggat cgctgttcgg cacggcatcg gcaaaggttt tttggtccgg
    16981 aaaaagtttg gcgttttgca catcattaaa cagcggccct aataaaatat caggcggctg
    17041 tggtgttacc ggtgtttctt ctgcctgcac cgatagcgca gcgaaacaca aaaagataca
    17101 ggct
//
LOCUS       DADMJE010000086        16797 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.087, whole genome shotgun sequence.
ACCESSION   DADMJE010000086 DADMJE010000000
VERSION     DADMJE010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16797)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16797)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16797
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.087"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..2017
                     /gene="fhuE"
                     /locus_tag="JN001_002498"
     CDS             <1..2017
                     /gene="fhuE"
                     /locus_tag="JN001_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferric-rhodotorulic acid/ferric-coprogen
                     receptor FhuE"
                     /protein_id="HAY9053692.1"
                     /translation="DYSVTSTSAGTKMQMTQRDIPQSVTIVSQQRMEDQQLQTLGEVM
                     ENTLEISKSQADSDRALYYSRGFQIDNYMVDGIPTYFESRWNLGDALSDMALFERVEV
                     VRGATGLMTGTGNPSAAIDMVRKHATSREFKGDVSAEYGSWNKERYVADLQSPLTEDG
                     KIRARIVGGYQNNDSWLDRYNSEKTFFSGIVDADLGDLTTLSAGYEYQRIDVNSPTWG
                     GLPRWNTDGSSNSYDRARSTAPDWAYNDKEINKVFMTLKQRFADTWQATLNATHSEVE
                     FDSKMMYVDAYVNKADGMLVGPYSNYGPGFDYVGGTGWNSGKRKVDALDLFADGSYEL
                     FGRQHNLMFGGSYSKQNNRYFSSWANIFPDEIGSFYNFNGNFPQTDWSPQSLAQDDTT
                     HMKSLYAATRVTLADPLHLILGARYTNWRVDTLTYSMEKNHTTPYAGLVFDINDNWST
                     YASYTSIFQPQNDRDSSGKYLAPITGNNYELGLKSGWMNSRLTTTLAIFRIEQDNVAQ
                     STGTPIPGSNGETAYKAVDGTVSKGVEFELNGAITDNWQLTFGATRYIAEDNEGNAVN
                     PNLPRTTVKMFTSYRLPVMPELTVGGGVNWQNRVYTDTVTPYGTFRAEQGSYALVDLF
                     TRYQVTKNFSLQGNVNNLFDKTYDTNMEGSIVYGAPRNFSITGTYQF"
     gene            complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JN001_002499"
     CDS             complement(2077..3510)
                     /gene="ptsG"
                     /locus_tag="JN001_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000475716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIBC"
                     /protein_id="HAY9053693.1"
                     /translation="MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPAVV
                     SHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLH
                     LPAEEIASKHLADTGVLGGIISGAIAAYMFNRFYRIKLPEYLGFFAGKRFVPIISGLA
                     AIFTGVVLSFIWPPIGSAIQTFSQWAAYQNPVVAFGIYGFIERCLVPFGLHHIWNVPF
                     QMQIGEYTNAAGQVFHGDIPRYMAGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPEN
                     RAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYIIHAILAGLAFPICILLGMHDG
                     TSFSHGLIDFIVLSGNSSKLWLFPIVGIGYAIVYYTIFRVLIKALDLKTPGREDATED
                     AKATGTSEMAPALVAAFGGKENITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVV
                     AGSGVQAIFGTKSDNLKTEMDEYIRNH"
     gene            complement(3805..4602)
                     /locus_tag="JN001_002500"
     CDS             complement(3805..4602)
                     /locus_tag="JN001_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY9053694.1"
                     /translation="MFLVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTL
                     PGYLHMRDLVGERDNVVFSCGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYT
                     PETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTED
                     RETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKE
                     NQPAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLFHIDASRLQSIR"
     gene            complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JN001_002501"
     CDS             complement(4613..5617)
                     /gene="holB"
                     /locus_tag="JN001_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HAY9053695.1"
                     /translation="MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYAL
                     SRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGIDAVREVTEKLNE
                     HARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCR
                     LHYLAPPPEQYTVTWLSREVTMSQDALLAALRLSAGSPSAALALFQGDNWQARETLCQ
                     ALAYSVPSGDWYSLLAALNHEQAPARLHWLATLLMDALKRHHGAAQVTNVDVPGLVAE
                     LANHLSPSRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
                     "
     gene            complement(5614..6255)
                     /locus_tag="JN001_002502"
     CDS             complement(5614..6255)
                     /locus_tag="JN001_002502"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HAY9053696.1"
                     /translation="MRSKYIVIEGLEGAGKTTARNVVVETLEQLGIRDMVFTREPGGT
                     QLAEKLRSLVLDIKSVGDEVITDKAEVLMFYAARVQLVETVIKPALANGTWVIGDRHD
                     LSTQAYQGGGRGIDQHMLATLRDAVLGDFRPDLTLYLDVTPEVGLKRARARGELDRIE
                     QESFDFFNRTRARYLELAAQDKSIHTIDATQPLEAVMDAIRTTVTHWVKELDA"
     gene            complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JN001_002503"
     CDS             complement(6245..7267)
                     /gene="yceG"
                     /locus_tag="JN001_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein YceG"
                     /protein_id="HAY9053697.1"
                     /translation="MKKVLLIILLLLVVLGIAAGVGVWKVRHLADSKLLIKEETIFTL
                     KPGTGRLALGEQLYADKIINRPRVFQWLLRIEPDLSHFKAGTYRFTPQMTVREMLKLL
                     ESGKEAQFPLRLVEGMRLSDYLKQLREAPYIKHTLSDDKYATVAQALELENPEWIEGW
                     FWPDTWMYTANTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKE
                     TAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTI
                     TGLPPGAIATPGADSLKAAAHPAKTPYLYFVADGKGGHTFNTNLASHNKSVQDYLKVL
                     KEKNAQ"
     gene            complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JN001_002504"
     CDS             complement(7270..8079)
                     /gene="pabC"
                     /locus_tag="JN001_002504"
                     /EC_number="4.1.3.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate lyase"
                     /protein_id="HAY9053698.1"
                     /translation="MFLINGHKQESLAVSDRATQFGDGCFTTARVIDGKVSLLSAHIQ
                     RLQDACQRLMIFCDFWPQLEQEMKTLAAEQQNGVLKVVISRGSGGRGYSTLNSGPATR
                     ILSVTVYPAHYDRLRNEGMTLALSPVRLGRNPHLAGIKHLNRLEQVLIRSHLEQTNAD
                     EALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQAGVNGIMRQFCIRLLAQSSYQLVE
                     VQASLEEALQADEMVICNALMPVMPVRACGDVSFSSATLYEYLAPLCERPN"
     gene            complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JN001_002505"
     CDS             complement(8199..9440)
                     /gene="fabF"
                     /locus_tag="JN001_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HAY9053699.1"
                     /translation="MSKRRVVVTGLGMLSPVGNTVESTWKALLAGQSGISLIDHFDTS
                     AYATKFAGLVKDFNCEDIISRKEQRKMDAFIQYGIVAGVQAMQDSGLEITEENATRIG
                     AAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISI
                     ATACTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAARALSTRNDNPQA
                     ASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFGMSSDAYHMTSPPEN
                     GAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKAIFGEAASRVLVSS
                     TKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNLDEGCDLDFVPHEARQVSGME
                     YTLCNSFGFGGTNGSLIFKKI"
     gene            complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JN001_002506"
     CDS             complement(9528..9764)
                     /gene="acpP"
                     /locus_tag="JN001_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016535861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HAY9053700.1"
                     /translation="MSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELV
                     MALEEEFDTEIPDEEAEKITTVQAAIDYINGHQA"
     gene            complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JN001_002507"
     CDS             complement(9975..10709)
                     /gene="fabG"
                     /locus_tag="JN001_002507"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP reductase FabG"
                     /protein_id="HAY9053701.1"
                     /translation="MNFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQA
                     ISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEE
                     WNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIG
                     FSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANA
                     VAFLASDEAAYITGETLHVNGGMYMV"
     gene            complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JN001_002508"
     CDS             complement(10722..11651)
                     /gene="fabD"
                     /locus_tag="JN001_002508"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HAY9053702.1"
                     /translation="MTQFAFVFPGQGSQTVGMLADMAASYPIVEETFAEASAALGYDL
                     WALTQQGPAEELNKTWQTQPALLTASVALYRVWQQQGGKAPAMMAGHSLGEYSALVCA
                     GVIDFADAVRLVEMRGKFMQEAVPEGTGAMAAIIGLDDASIAKACEEAAEGQVVSPVN
                     FNSPGQVVIAGHKEAVERAGAACKAAGAKRALPLPVSVPSHCALMKPAADKLAVELAK
                     ITFNAPTVPVVNNVDVKCETNGDAIRDALVRQLYNPVQWTKSVEYMAAQGVEHLYEVG
                     PGKVLTGLTKRIVDTLTASALNEPSAMAAALEL"
     gene            complement(11667..12620)
                     /locus_tag="JN001_002509"
     CDS             complement(11667..12620)
                     /locus_tag="JN001_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketoacyl-ACP synthase III"
                     /protein_id="HAY9053703.1"
                     /translation="MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHI
                     AAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKG
                     CPAFDVAAACAGFTYALSVANQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDG
                     AGAAVLAASEEPGIISTHLHADGSYGELLTLPNADRVNPENSIHLTMAGNEVFKVAVT
                     ELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTS
                     AASVPCALDEAVRDGRIKPGQLVLLEAFGGGFTWGSALVRF"
     gene            complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JN001_002510"
     CDS             complement(12688..13758)
                     /gene="plsX"
                     /locus_tag="JN001_002510"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415608.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HAY9053704.1"
                     /translation="MTRLTLALDVMGGDFGPSVTVPAALQALNSNSQLTLLLVGNPDA
                     ITPLLAKADFEQRSRLQIIPAQSVIASDARPSQAIRASRGSSMRMALELVKEGRAQAC
                     VSAGNTGALMGLAKLLLRPLEGIERPALVTVLPHQQKGKTVVLDLGANVDCDSTMLVQ
                     FAIMGSVLAEEVVEIPNPRVALLNIGEEEVKGLDSIRDASAVLKTIPSINYIGYLEAN
                     ELLTGKTDVLVCDGFTGNVTLKTMEGVVRMFLSLLKSQGEGKKRSWWLLLLKRWLQKS
                     LTRRFSHLNPDQYNGACLLGLRGTVIKSHGAANQRAFAVAIEQAVQAVQRQVPQRIAA
                     RLESVYPAGFELLDGGKSGTLR"
     gene            complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JN001_002511"
     CDS             complement(13839..14012)
                     /gene="rpmF"
                     /locus_tag="JN001_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HAY9053705.1"
                     /translation="MAVQQNKPTRSKRGMRRSHDALTAVTSLSVDKTSGEKHLRHHIT
                     ADGYYRGRKVIAK"
     gene            complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JN001_002512"
     CDS             complement(14064..14585)
                     /gene="yceD"
                     /locus_tag="JN001_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001174481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA accumulation protein YceD"
                     /protein_id="HAY9053706.1"
                     /translation="MQKVKLPLTLDPVRTAQKRLDYQGIYTPDQVERVAESVVSVDSD
                     VECSMSFAIDNQRLAVLNGDAKVTVTLECQRCGKPFTHQVYTTYCFSPVRSDEQAEAL
                     PEAYEPIEVNEFGEIDLLAMVEDEIILALPVVPVHDSEHCEVSEADMVFGELPEEVQK
                     PNPFAVLASLKRK"
     gene            14784..15368
                     /gene="yceF"
                     /locus_tag="JN001_002513"
     CDS             14784..15368
                     /gene="yceF"
                     /locus_tag="JN001_002513"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415605.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-methyl-GTP pyrophosphatase"
                     /protein_id="HAY9053707.1"
                     /translation="MPKLILASTSPWRRALLEKLQISFECAAPEVDETPRSDESPRQL
                     VLRLAQEKAQSLASRYPDHLIIGSDQVCVLDGEITGKPLTEENARLQLRKASGNIVTF
                     YTGLALFNSANGHLQTEVEPFDVHFRHLCEAEIDNYVRKEHPLHCAGSFKSEGFGITL
                     FERLEGRDPNTLVGLPLIALCQMLRREGKNPLMG"
     gene            complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JN001_002514"
     CDS             complement(15480..16439)
                     /gene="rluC"
                     /locus_tag="JN001_002514"
                     /EC_number="5.4.99.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(955/2504/2580) synthase
                     RluC"
                     /protein_id="HAY9053708.1"
                     /translation="MKTETPSVKIVAITADEAGQRIDNFLRTQLKGVPKSMIYRILRK
                     GEVRVNKKRIKPEYKLEAGDEVRIPPVRVAEREEEAVSPHLQKVAALADVILYEDDHI
                     LVLNKPSGTAVHGGSGLSFGVIEGLRALRPEARFLELVHRLDRDTSGVLLVAKKRSAL
                     RSLHEQLREKGMQKDYLALVRSQWQSHVKSVQAPLLKNILQSGERIVRVSQEGKPSET
                     RFKVEERYAFATLVRCSPVTGRTHQIRVHTQYAGHPIAFDDRYGDREFDRQLTEAGTG
                     LNRLFLHAAALKFTHPGTGEVMRIEAPMDEGLKRCLQKLRNAR"
BASE COUNT         4178 a         4559 c         4052 g         4008 t
ORIGIN      
        1 tgattacagc gtaacgtcta cctctgcggg taccaaaatg cagatgactc aacgtgatat
       61 tcctcagtcg gtcactattg ttagccagca gcggatggaa gatcagcagt tacaaacgct
      121 gggcgaagtg atggaaaaca cgctggagat cagcaaaagt caggcggatt ccgatcgtgc
      181 tctttattat tcccgcggat tccagatcga taactatatg gttgatggta tccccaccta
      241 ttttgaatcg cgctggaatc tgggcgatgc actttctgat atggcactgt ttgaacgcgt
      301 agaagtagtg cgtggcgcga caggactcat gaccgggacg ggtaatccat ctgcggcaat
      361 tgatatggtt cgaaaacacg cgaccagtcg tgaatttaaa ggcgatgtct cggcggaata
      421 cggtagctgg aacaaagaac ggtatgtggc ggatttacaa agcccactca ccgaagacgg
      481 taaaatccgc gcgcgaattg tcggcggcta ccagaataac gactcatggc tggaccgcta
      541 caacagtgaa aagaccttct tctccggcat tgtcgatgct gatttaggcg atcttacgac
      601 gctttcagcc ggttacgaat atcagcgcat tgatgttaat agccctacct ggggcggttt
      661 accgcgctgg aatactgatg gcagcagcaa cagttacgat cgtgcacgca gtaccgcacc
      721 tgactgggcg tacaacgata aagagatcaa caaggtcttt atgaccctga agcagcggtt
      781 tgctgatacc tggcaagcga cactgaatgc cacccactct gaagtcgaat ttgacagcaa
      841 aatgatgtat gtcgatgcct atgtaaacaa agcggatggt atgctggttg ggccatacag
      901 taattatgga cctggctttg attatgtcgg cggcaccggt tggaacagtg gcaaacgtaa
      961 agttgatgcg ctagatttgt tcgctgacgg tagttatgaa ttgtttggtc gtcagcacaa
     1021 tctaatgttt ggtggcagtt acagcaaaca aaacaatcgt tacttcagtt catgggccaa
     1081 catcttcccg gatgaaattg gcagtttcta caactttaat ggcaatttcc cacaaaccga
     1141 ctggtcacca cagagcctgg cacaggacga taccacacat atgaaatcgt tatatgctgc
     1201 cactcgagtc acccttgccg atccgctgca tctgatcctc ggcgcacgct ataccaactg
     1261 gcgggttgat acgctgactt acagcatgga gaaaaaccac accacgcctt acgctggtct
     1321 ggtgtttgac atcaatgaca actggtcgac ctacgccagc tatacctcta ttttccagcc
     1381 gcaaaatgat cgtgacagtt caggcaaata tctggctcca atcaccggta acaactacga
     1441 gctgggtctg aaatcgggct ggatgaatag ccgtctgacc accacgttag ccatcttccg
     1501 tattgagcag gataatgtcg ctcagtccac cggtacacct atccccggca gcaacggcga
     1561 aaccgcctat aaagcggtgg atgggacagt cagtaaaggg gtggaatttg aactcaacgg
     1621 cgcaattacc gacaactggc agctgacatt tggcgcaacg cgctatattg cagaggataa
     1681 cgaaggaaac gccgttaatc ctaatctgcc acgcaccacg gttaaaatgt tcaccagcta
     1741 tcggttgcct gtcatgccag agttgacagt cggcggtggt gtgaactggc aaaatcgcgt
     1801 gtataccgac accgtgacac cgtatggcac cttccgcgcc gagcaaggta gctacgcgct
     1861 ggtggatctc ttcacccgct accaggtgac gaaaaacttc tcgttacagg ggaacgtcaa
     1921 taacctgttc gacaaaacct acgataccaa catggaaggt tctatcgtct acggcgcacc
     1981 gcgtaatttc agcattaccg gcacgtatca attctgaata acacctgtaa aaaaggcagc
     2041 catctggctg ccttagtctc cccaacgtct tacggattag tggttacgga tgtactcatc
     2101 catctcggtt ttcaggttat cggatttagt accgaaaatc gcctgaacac cagaacccgc
     2161 aaccactacg cccgctgcgc ccagtttctt caggccagcc tgatccactt tagacacatc
     2221 agcaacgctg acgcgcagac gggtaataca tgcgtcgagg ttagtaatgt tttctttacc
     2281 accaaatgca gcaaccagag ccggtgccat ttcgctggta cctgttgctt ttgcatcttc
     2341 agtcgcgtct tcacgacccg gcgttttcag atccagtgct ttaatcagca cgcggaagat
     2401 ggtgtagtaa acaatcgcat aaccgatacc gacgatcggg aacagccaca gtttgctgct
     2461 gttaccagac agaacgataa agtcgatcag accgtgcgag aacgacgtac cgtcatgcat
     2521 ccccagaaga atacagattg ggaatgccag gcctgccaga atcgcgtgga tgatgtacag
     2581 gatcggcgca acgaacatga aggagaactc gatcggctcg gtgataccgg tcaggaacga
     2641 ggtcagcgcc gcggagatca taataccgcc cactttcgcg cggttttctg gtttagcaga
     2701 gtgccagata gcaattgcgg cagctggcag accgtacatt ttgaacagga agccaccaga
     2761 cagtttaccc gcagtcgggt cacccgccat ataacgcgga atgtcgccgt ggaaaacctg
     2821 acctgctgcg ttggtgtatt caccaatctg catctggaaa ggtacgttcc agatgtggtg
     2881 cagaccaaac ggtaccaggc aacgttcgat gaaaccgtaa atgccaaacg caactaccgg
     2941 gttctggtaa gcagcccact gagagaaggt ctggattgca gaaccaatcg gcggccaaat
     3001 gaaggacagc acaacgccag taaagatggc agccaggcca gaaatgatcg gcacaaagcg
     3061 tttaccggca aagaagccaa gatactcagg cagcttaata cggtagaaac ggttaaacat
     3121 gtacgctgcg atcgcaccgg agataatccc tccgagtacg ccagtatccg ccaggtgttt
     3181 agaggcgatt tcttcagcag gtaaatgcag taccagtggc gcaaccacgg ccatggtttt
     3241 aaccatgatg ccataggcaa caactgcggc cagcgcggat acgccatcgt tattggtaaa
     3301 gccgagggcg acaccgatcg caaaaatcag tggcatgttt gcaaagacgg aaccgcctgc
     3361 ttctgccata acatgcgata caacggcggg cagccagctg aaattcgcgg aaccgacgcc
     3421 cagcagaata cctgcgatag gtagtacgga taccggcagc atcagcgatt taccgacctt
     3481 ttgcaggtta gcaaatgcat tcttaaacat aattgagagt gctcctgagt atgggtgctt
     3541 tttttacgtt ctcacgcgtg gcaagggggg agagcctcgc cgtgtacagg gcatctaagc
     3601 gccctttatt tattacacag agtaaaataa ttcagtgcca atttgtttga cggctatcac
     3661 gtttcaactt cagatcattg gagaagttgc acattttgac aaaacatatg tcacaatatt
     3721 tcaaacgcgg ttattcaccg cccaattttc ggcggtgaac tttactcgtt ttagccatta
     3781 attacgagct ttaaaaaaac tcattcaacg gatggattga aggcgggaag cgtcgatgtg
     3841 aaacagacgg gcgaagttat cggtggttac ctgcgccagt tcttcaacgg caacaccttt
     3901 caacacagcc atgtattctg caacgtcacg aaccatcgca ggttgattct cttttcctcg
     3961 atgcggtacc ggcgcaaggt aaggtgagtc agtttccacc agtaatcgat ccagggggac
     4021 ataacgcgca gcatcgcgca gttgctccgc attacggaag gtcacaatgc cggaaaagga
     4081 gatgtaaaat ccgagatcca gtaatttacc cgccgtttct ctgtcctctg taaaacagtg
     4141 tagtacgcca ccgcaatccg tcactttttc ttcgcgcaga attgccagcg tatcggcacg
     4201 ggcgtcacgg gtatggacga taaccggctt gttcagttca cgaccaatct ggatatgatg
     4261 gatgaaggac tcttgctgac gtactttagt ttccggtgtg taataataat ccagcccggt
     4321 ttcacccagc gctacaacac cctcttctgc cgccagacgg cgtaaatctt ctacatcgta
     4381 gggatcattc tggttgagtg gatgcacgcc acaagaaaat acgacgttgt cacgttcgcc
     4441 taccagatcc cgcatatgta aataacccgg taatgttgtg gcgactgcca gacaaaattt
     4501 cacatcgcgt gcggcggctt tcgccagaac gtcatccacg tccttatgca aagattcata
     4561 atccagacca tcgagatggc agtgtgagtc gactaaaaac atgatgtctc tcttaaagat
     4621 gaggaaccgg tagcacaacg cccggttgca ggtaatgctc aatacgcagt aaaagatcgg
     4681 tgatgagaag ctcgcggttg atgcctgtga cagacattaa ctgttcacga atgtggcaaa
     4741 catcccccag tatagcctgc aggcgcgagg gagaaagatg gtttgccagt tcggcgacca
     4801 ggcccggcac atcaacattg gtcacctgtg cagcgccatg atggcgtttt agcgcatcca
     4861 tcagcaacgt tgccagccag tgtaaacgcg ccggagcttg ttcatgatta agggccgcca
     4921 gcagcgaata ccagtcgccc gatggtacgc tatatgccaa cgcctgacac aatgtttcac
     4981 gagcctgcca gttatctccc tgaaacaacg ccagtgccgc gctaggcgaa ccggcactta
     5041 agcgcaatgc ggcaagtaat gcatcctgtg acattgtcac ttcgcgtgaa agccaggtca
     5101 cggtgtactg ttccggcggc ggcgcaaggt aatgtaaccg acaacgacta cgtaatgttg
     5161 ccagtaaacg ttcaggctcg cgggtagcca ggaaaaacca ggtttctgct ggtggctctt
     5221 caagcgtttt cagcaatgcg ttagccgcgg cgtcggtcag taaggcagca tcggttaccc
     5281 agacaacttt cgcaccacct aggcgtgcgt gctcattcag cttttcggtg acctcacgta
     5341 ccgcatcaat gcccagcgta tttttccctt tttcgggagc cagggtgtag taatcgggat
     5401 gcgtgccagc ctgcatcaac tgacatccac gacagtgacc gcaacttttg tggccctgcg
     5461 gttgttggca gagtaaataa cggctcaggg cgtagattaa agcatcatcg cccatgcccg
     5521 gtaacgcctg aatgagtagc gcatggtgac ctcttccggc ctgatagctg gctaccagtt
     5581 tttcgaaatc aggtcgtaac catggatacc atctcatgcg tccaactcct tcacccagtg
     5641 ggtcacggta gtacggattg catccatcac ggcctccagc ggctgggtgg catcaatggt
     5701 atgaatactt ttatcttgtg cagccagttc cagatagcgg gcgcgggtgc gattaaagaa
     5761 atcgaaagac tcttgctcaa tacgatccag ctcgccgcgc gcacgcgcgc gttttaagcc
     5821 aacttccggg gtaacatcga gatagagcgt taagtcaggg cgaaaatccc cgagaacagc
     5881 atcacgcagt gttgccagca tatgttggtc aataccacgt cctccgccct gatacgcctg
     5941 agtggagaga tcgtggcgat cgccaatcac ccaggtgccg ttagccagag ctggtttgat
     6001 gaccgtttct accagttgaa cgcgcgcggc ataaaacatc agaacttcgg ctttatcggt
     6061 aatgacttca tcgcctaccg atttgatatc cagcaccagg cttcttaact tttcggcaag
     6121 ttgcgtaccg ccaggttccc gagtgaaaac catgtcgcgg atacccagtt gctcaagcgt
     6181 ctcaaccacc acattacgcg cggtagtttt gcctgcgcct tccagcccct caatgacgat
     6241 atacttactg cgcatttttt tccttaagca ctttcagata atcctgcaca gacttgttat
     6301 ggctggcaag attggtatta aacgtgtgac cacctttacc atcggccaca aaatagagat
     6361 acggcgtttt tgccggatgc gcagcagcct tcagcgaatc cgcccccggc gtagctatcg
     6421 cacctggcgg caaaccggta atggtatagg tgttatacgc tgtcggcgtt tccaggtctg
     6481 cacgagaaag tttgccatta taacgctctc ccatcccgta aatcacggtt gggtcggtct
     6541 gcaggcgcat accaatgcgt aaacggttga taaataccga ggcaacctga tcgcgttcac
     6601 tggcaacggc ggtttctttt tcgataattg atgccatcgt caccagctgg tttttatctt
     6661 tataaggcag accgtccgca cgcccttccc aggcgctatc gaccgctttc accattttct
     6721 tgtgcgctcg cttgagtaac gcgacatcgg tggtattggc ggtatacatc caggtgtctg
     6781 gccagaacca accttcaatc cactccgggt tttccagttc aagtgcctgc gctacggtgg
     6841 cgtacttatc gtcactcagc gtgtgcttga tatacggagc ctcacgcaat tgcttgaggt
     6901 agtcgctcag acgcatccct tctaccagtc gcagcgggaa ctgtgcttct ttaccgcttt
     6961 ccagcaattt cagcatctcg cgcacggtca tctgcggtgt aaagcggtaa gtcccggctt
     7021 taaagtgaga aagatccggt tcgatacgca gcaaccattg aaaaacccgt gggcgattga
     7081 tgatcttatc ggcataaagc tgttcaccaa gcgccagacg tccggtccct ggcttcaggg
     7141 taaatatcgt ctcttctttg ataagcaatt tgctgtcggc aagatggcga accttccaga
     7201 cgcccacacc agcggcgata cccagtacca ccagcaataa caagataatc aataacactt
     7261 ttttcatgac taattcgggc gctcacaaag tggggctaaa tattcatata acgttgctga
     7321 cgaaaaggag acatcgccac aggcacgtac gggcatcact ggcattaacg cattacaaat
     7381 aaccatctca tctgcctgca acgcctcttc cagagaggct tgcacttcga caagctgata
     7441 agaggattgt gccagcaaac ggatacagaa ttgtcgcata atgccgttaa cacctgcctg
     7501 atccagtcgc ggcgtataaa ctacattgcc cttccgccag aacaaattag ccgcacagca
     7561 ttccgtaacc cacccttcgc tgtcaaggac cagcgcctca tcagcgtttg tctgctcaag
     7621 atgagagcgg atcaatactt gctcaagccg attaagatgt ttaatacctg caagatgggg
     7681 attgcgcccc agccgcaccg ggcttagcgc caacgtcatc ccttcgttac gcaaacggtc
     7741 gtaatgtgca ggataaaccg taacggagag aatccgcgtt gccggtccac tgttcaatgt
     7801 gctgtaccct cgcccgccac taccgcgact gatcacgact ttcagcacac cattttgctg
     7861 ttctgctgcc agcgttttca tctcttgttc aagctgaggc cagaagtcac agaaaatcat
     7921 caaccgctga caagcatcct gtagtcgctg gatatgcgcc gataacaaac tgactttacc
     7981 gtcgataact ctggcggtgg taaaacaacc atcaccaaac tgcgttgccc gatcgcttac
     8041 tgccagcgat tcctgcttat gaccgttaat taagaacata ccggctcctt atcagagaat
     8101 tgttagtgtg gcagcatgct cactacggaa caagtcggaa taaaagctaa gaaaaaaggc
     8161 ccgcaagcgg accttttata tgggtgggaa atgacaactt agatcttttt aaagatcaaa
     8221 gaaccattag tgccaccgaa gccgaaggag ttacacagcg tgtattccat tccgctgacc
     8281 tgacgtgctt catgcggtac gaaatccaga tcgcaacctt catccaggtt atccaggttg
     8341 atggttggcg gaacagcctg atcgcgcagc gccaggatgg agtagataga ctctactgcc
     8401 cccgccgcac ctaacaggtg accggtcata gatttcgtgg agcttaccaa cacacggctt
     8461 gcagcttcac cgaagatggc tttcaccgcc tgcgcttcag ctttatcgcc agccggcgta
     8521 gaagtaccgt gcgcgttaac gtagccaatc tgactcgctt caatgcctgc atcacgcaga
     8581 gcatttgcca ttgccagagc tgcgcctgcg ccattttctg gcggtgacgt catatgataa
     8641 gcatcgctgc tcataccaaa gccgacgagt tcagcgtaaa ttttcgcacc gcgttttttc
     8701 gcgtgttcgt actcttctag taccagcata ccggcaccat cgcccagtac gaagccatca
     8761 cgctctttat cccacgggcg gctcgccgct tgcgggttat cattgcgggt agataatgca
     8821 cgtgccgcgc caaaaccacc aacgcccagc ggcgtactgg ctttctctgc gccacctgca
     8881 accatcacgt cagcatcgcc atacgcgata atacgcgcag catgaccaat gttgtgcacg
     8941 ccggaagtac aggcggtcgc gatagagatg cttgggccac gcaggccata catgatagtc
     9001 agatgacctg ccaccatgtt cacaatcgtt gacggaacga agaatgggct gatcttacgt
     9061 ggaccaccgt tcatcagaga tgtgtggttt tcttcgatca gtccgaggcc gccaatcccg
     9121 gagccaattg cggcaccaat gcgggttgcg ttctcttccg ttatttcaag gccagaatcc
     9181 tgcatggcct gaacgccagc gacaattcca tattgaatga aggcatccat cttgcgctgt
     9241 tctttgcgcg agataatgtc ctcacagtta aaatccttta ctaagccagc aaatttcgtt
     9301 gcataggcgc tagtatcgaa atggtcgatt aggctgatgc cactctgacc ggcaagcaga
     9361 gctttccagg tagactctac ggtattgccg acaggagaca acatgcccag tccggtcaca
     9421 actacacgac gcttagacac gtttgtcctc cagggaggga aaaaatgatt ctagtgggac
     9481 aaaaagataa aactcaggcg gtcgaacgac cgcctggaga tgttcactta cgcctggtgg
     9541 ccgttgatgt aatcaatggc agcctgaacg gtggtgattt tctcagcttc ttcgtccgga
     9601 atctcagtat caaactcttc ttccagagcc attaccagct caacggtgtc aagagaatcc
     9661 gcgcccaggt cttcaacgaa agaagcattg ttggtaactt cttcctgctt aacgcccagc
     9721 tgttcgccga taattttctt aacgcgttct tcgatagtgc tcatactctt aaatttccta
     9781 tcaaaactcg ctttcgcgat ggttttcgta gtgtataaaa tgttgaaaaa tttgcaacta
     9841 aatcccggca ggtcttacca cgattttacg ttattttgag gccttacccc ccaataacgc
     9901 aaatcatttt gcactaatta ttactcataa ccacgcagac tgcgcgcaac atgagcattt
     9961 tgtgcaaatc gcggtcagac catgtacatc ccgccgttca catgcaaagt ttcacccgtg
    10021 atgtaagctg cttcgtcgga tgccaggaat gcaaccgcgt tggcgatttc ctgtgcgccg
    10081 ccgaggcgac ccgcaggaac ctgcgccagg atacccgcac gctggtcatc gctcagcgca
    10141 cgtgtcatgt ccgtttcaat aaagcccgga gcaacaacgt ttacagtaat accgcgtgac
    10201 gcaacttcgc gcgccagtga tttactgaag ccgatcaagc ccgctttcgc cgcagcgtag
    10261 ttggcctgac cgccatttcc catggtacca accacagaac cgatagtgat aatacgacca
    10321 tgacgctttt tcatcatagc gcgcattacc gcttttgaca gacggaaaac agatgaaagg
    10381 ttggtttcga taatatcgtt ccactcttca tctttcattc gcattaacag gttatcacga
    10441 gtgataccgg cattattgac caggatatcc acttcaccaa attctgcgcg aattttttcc
    10501 agaacagatt cgatagatgc cgggtcggtc acattcaaca tcagaccttt gccgttagca
    10561 cctaaataat cactgatcgc ctgagcgcca ttttcactgg tcgcagtgcc aataactttc
    10621 gcgccacggg ctgcgagcgt ttcagcaatt gcgcggccaa ttccgcggct tgcaccggtt
    10681 accagtgcga tttttccttc aaaattcatg attttcctct tttaaagctc gagcgccgct
    10741 gccatcgctg aaggttcgtt cagcgccgag gcggtcaggg tgtcgacaat gcgtttcgtc
    10801 aggccagtta gcactttgcc cgggccgact tcatagagat gttctacgcc ttgcgctgcc
    10861 atgtactcaa cagacttcgt ccactgaacc gggttataca actgacgtac cagtgcgtca
    10921 cgaatggcat caccattggt ttcgcatttc acatcaacgt tattcacaac aggaactgtt
    10981 ggtgcgttaa aggtgatttt cgctaattct actgccagtt tgtcggctgc tggtttcatc
    11041 agcgcacagt gagacggtac gctcactggt aacggcagcg cgcgttttgc gcccgcagct
    11101 ttacaggcag cgccagcacg ctcaaccgcc tctttatgac cggcaataac cacctgtccc
    11161 ggagagttaa agtttaccgg agaaacgacc tgaccttctg cagcttcttc acacgctttc
    11221 gcaatagacg catcatccag accgatgatt gccgccatag cgcccgtgcc ttctggtacg
    11281 gcttcttgca tgaacttgcc gcgcatctca accagacgca ccgcatcagc gaaatcaatc
    11341 acgccagcgc aaaccaacgc ggagtattcc cccaggctgt gaccggccat cattgccggt
    11401 gctttaccgc cctgctgctg ccatacgcga tacagcgcaa cagatgcagt caacagcgct
    11461 ggctgggttt gccaggtttt attcagttct tcagctggcc cctgctgggt cagcgcccac
    11521 aggtcgtagc ccagcgccgc agaagcttca gcaaacgttt cttcgacaat tggatagctc
    11581 gccgccatat cagccagcat tccaacggtt tgagaaccct gtccagggaa cacaaatgca
    11641 aattgcgtca tgttttaatc cttatcctag aaacgaacca gcgcggagcc ccaggtgaat
    11701 ccaccgccaa aggcttcaag cagaaccaac tgccccggct taatgcgccc gtcgcgtaca
    11761 gcttcatcca gcgcgcacgg gacagaggcc gcagaggtat taccgtggcg atccaacgtc
    11821 accacgacat tgtccataga cataccgagt tttttcgccg ttgcactgat aatacgcagg
    11881 ttagcctgat gcggaaccag ccagtccagt tgagaacggt caagattatt cgccgccagc
    11941 gtctcatcaa cgatgtgcgc cagttccgtt accgcaacct tgaagacttc gttgcccgcc
    12001 atcgtcagat gaattgaatt ctctggattc acgcggtcgg cgtttggcag cgtcagcaat
    12061 tcaccataac taccgtcggc atgcagatgg gtggagatga ttcccggctc ttcagaggca
    12121 gccagcaccg cagcgcccgc gccatcgcca aaaataataa tagtcccacg atctgttgga
    12181 tcgcaggtgc gcgccagtac atcggaaccg acgaccagag catacttcac cgccccagat
    12241 ttcacgtatt gattggctac gcttaatgca taggtgaaac ctgcgcaggc tgctgcaacg
    12301 tcaaatgccg ggcaaccttt aatgcccaac atgctttgaa tctgacaagc tgcgctcggg
    12361 aaagcgtgcg tagcagaagt cgttgccaca acgatcaggc caatctggtc tttctcaatg
    12421 cccgccatct caattgcgcg tgtcgccgct tcaaagccca tggttgaaac ggtttcgttt
    12481 ggcgcggcaa tgtggcgttc gcggataccg gtacgagtga caatccactc gtcagaggtg
    12541 tccaccattt tttccaaatc ggcgtttgtc cgcacttgtt cgggcagata gctgccagta
    12601 ccaataatct tcgtatacat gtacgctcag tcacttttcg gttatatacc gtcacttgca
    12661 aactgcgagt tcgctggcag cgtcctgcta ccgcagagtt ccgcttttgc caccgtccag
    12721 cagctcaaaa ccagctgggt atacagattc caggcgagcg gcaattcgct gaggaacttg
    12781 tcgctgcacc gcctgcactg cctgttcaat cgcgaccgca aaagctcgct gattggctgc
    12841 accatgactt tttatcaccg tgccgcgcaa tcctaacaga caggcgccgt tatactggtc
    12901 ggggttgagg tgactgaatc gcctcgtcag gctcttttgt agccaacgct ttaataacag
    12961 tagccaccac gaccgttttt tcccttcacc ctgagatttc agcagagaaa ggaacatcct
    13021 gacaacacct tccatcgtct ttaacgtgac atttcctgta aagccgtcac aaaccagcac
    13081 atctgtcttg ccagttaaca actcattggc ttcaagatag ccgatataat tgatagaagg
    13141 gattgtttta agcaccgctg aggcatcccg aatactgtcg agacccttta cttcttcttc
    13201 accaatattg agcaacgcca cgcgaggatt gggaatttcc accacctctt cagccagaac
    13261 tgagcccata atggcaaatt gcaccaacat tgtgctgtca caatcgacgt tggcccctaa
    13321 atcgaggacc accgttttgc ccttttgctg atgtggtaat accgtcacca gcgccggacg
    13381 ctcaatcccc tccaggggcc tgagtaataa ttttgccagc cccatcagtg ccccggtatt
    13441 accggcactg acacaggctt gcgctcgacc ttctttcacc agctccaggg ccatacgcat
    13501 tgaactccca cgactagcgc ggatagcttg cgaaggccgg gcatcactgg cgataactga
    13561 ctgcgcagga ataatctgca gacgcgaacg ttgttcaaag tcagctttag caagtaatgg
    13621 cgtgatggcg tcgggattgc cgactaaaag aagagtgagt tgcgaattag aattcagtgc
    13681 ctgcaatgct gcaggcactg tcacggaagg gccaaaatcc cctcccatga catctaacgc
    13741 cagggttaga cgtgtcaagg tatcgtcgcc gcccggtttg gtctttcccc agttgcctgg
    13801 ggaaaatcct cactaagctt catcacgcag acgcgtgatt acttagcgat gaccttgcgg
    13861 ccgcggtagt aaccgtcggc agtgatatgg tgacgcaggt gtttttcacc agaagttttg
    13921 tctacagaca ggctggtgac tgcggtcagc gcgtcatggg aacgacgcat gccacgtttg
    13981 gaacgggttg gtttattctg ttgtacggcc atggacctta ctcctcaatt acggtttatc
    14041 cccgatccaa cggggagcac caattactta cgctttaagc tggctaatac ggcaaatggg
    14101 tttggctttt gcacttcttc aggcagttca ccaaagacca tgtccgcttc ggacacttca
    14161 cagtgttcag aatcatgcac cggaactacc ggcaaggcga ggatgatttc atcttcaacc
    14221 attgcaagca gatcgatttc accgaattcg ttaacctcaa tcggttcata cgcttccggc
    14281 agtgcttcag cctgttcgtc tgaacgcaca ggactaaaac aatacgttgt gtagacctga
    14341 tgagtaaacg gcttcccgca acgctgacac tcgagcgtta ccgtcacctt cgcatcgccg
    14401 tttaacactg cgagacgttg gttatcgata gcgaacgaca tggagcattc cacatcactg
    14461 tccacactga ctacggattc ggcgacgcgc tcaacctgat caggggtata gataccctgg
    14521 taatcaaggc gtttttgagc cgtacgaacc ggatcgagag tcaggggtaa ttttaccttt
    14581 tgcatagggc gcgcatatta actttgtaac gtcatagagt caaagaaaaa ggcagcctgt
    14641 ggttgccttt tgccaataat tcgcacacat tgcgggttac tgctttattt tcgttcagtg
    14701 ctgataacga acatcaacct gcaaaacgaa gcgcatagtt taaaatggct atcatcaata
    14761 cgctatatct gatggaaaaa aatatgccta aacttatttt agcctccacc tcgccatggc
    14821 gtcgcgctct tctggaaaaa ctgcaaatct cttttgaatg tgcagcacca gaggtcgacg
    14881 aaaccccacg cagcgacgaa tcaccgcgac agttggtgct tcgactggca caagaaaaag
    14941 cgcaatctct ggcgtcacgt tatccggatc atttaattat tggttcagac caggtatgtg
    15001 ttcttgatgg cgaaatcacc ggtaaaccgt taacggaaga aaatgcccgt ctgcaattac
    15061 gcaaagccag cggcaatatc gtcaccttct atactggact ggcgttgttt aattcggcga
    15121 atgggcatct acaaacagaa gtggagcctt ttgacgtcca tttccgtcac ctgtgcgagg
    15181 cggagattga taattacgtg cgtaaggagc atcccctgca ctgcgcgggt agctttaaga
    15241 gtgaaggatt tggcattacg ctgtttgagc gtttagaggg acgtgaccct aacacgctgg
    15301 ttggtttacc gctaatcgcg ctgtgtcaga tgttacgtcg ggaagggaaa aacccgctga
    15361 tgggatagtt gtttgcgccg gatgcggtta cgtcgcatcc ggcaatcggt gcaggcggcc
    15421 tgatgcggcg taaacgcctt atcaggccaa ccgcccatta tcaggcttat atgcttgtat
    15481 tagcgcgcgt tacgcagctt ttgcaaacaa cgcttcaaac cttcatccat cggcgcttcg
    15541 atacgcatca cctcaccggt ccccggatgg gtaaacttca acgctgcggc gtgcaggaac
    15601 agacgattta atcccgtgcc tgcttcagtg agctgtctgt caaattcacg gtcaccgtag
    15661 cgatcgtcaa aggcaatcgg atgacccgca tactgtgtat gcacacggat ctgatgagta
    15721 cgtccggtta ccgggctaca acgcaccagg gtggcaaatg catagcgttc ttccacttta
    15781 aagcgtgttt ccgacggttt gccttcctga ctgacacgca cgatacgttc gccgctttgc
    15841 agaatatttt tcaataacgg cgcttgaacg ctcttcacat gcgactgcca ctgactgcgc
    15901 accagcgcca ggtaatcttt ttgcattcct ttttcacgta attgctcatg cagagaacgc
    15961 aacgccgagc gttttttcgc taccagcaac acacctgaag tgtcccggtc gagacgatga
    16021 accagttcaa ggaaccgcgc ttccgggcgc aacgcccgca aaccttcgat aacgccgaag
    16081 cttaaaccac tgccgccatg taccgccgta ccggaaggtt tattcagcac caggatatga
    16141 tcatcttcat ataagatgac gtccgccagc gccgccacct tttgcagatg tggcgaaacc
    16201 gcctcttctt cccgctcagc aacgcgaacc ggtgggatac gcacctcatc acccgcttcg
    16261 agtttatatt caggcttaat acgttttttg ttcacccgca cttcgccttt acgcaaaata
    16321 cggtaaatca tactttttgg tacgcctttc aattgggtac gcaaaaagtt gtcgatacgt
    16381 tgccccgctt cgtcagcggt gatagcaaca atttttacgg atggagtctc tgttttcatg
    16441 gtgggcgatt ctaattagcc aacaggattc gcgccactca tttttctatg cttatattta
    16501 gttttacacc ttattacttc actacgtgat cactttattg atggttatta aaccaatcac
    16561 cagcaagaag tgaaaaatgt aatgaacgca tcccacacaa ttaaacacgg agcagtatga
    16621 tggttaaaag ggtgaaactg gcaggtgtgg agcctcgcag atttccggca tcatagtgcc
    16681 caatacggga tgcataaagc tccctcagac tggagactcc acaaatgaaa tatacaccgg
    16741 ttggcgttgg tatcgcaaaa catgtcattc agattcactt catcaatgag cacacag
//
LOCUS       DADMJE010000087        16619 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.088, whole genome shotgun sequence.
ACCESSION   DADMJE010000087 DADMJE010000000
VERSION     DADMJE010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16619)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16619)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16619
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.088"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..244)
                     /locus_tag="JN001_002515"
     CDS             complement(<1..244)
                     /locus_tag="JN001_002515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000100289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HAY9053709.1"
                     /translation="MSSWLAMLQDAAEMFVFLAVELSLLFIVISAGVSLIRQKVPDHK
                     IQQMMGARKGRGYLLAALLGAVTPFCSCSTIPIVTWI"
     gene            351..647
                     /locus_tag="JN001_002516"
     CDS             351..647
                     /locus_tag="JN001_002516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9053710.1"
                     /translation="MQLEEVAKALKELGHPTRLFIFKHLVKAGEQGLPVGELQKQLGI
                     PGSTLSHHISALVSVGLVKQNRESRTLMCVSQYAMLEAIIEFLREECCVNSKIA"
     gene            complement(781..1206)
                     /gene="arsC"
                     /locus_tag="JN001_002517"
     CDS             complement(781..1206)
                     /gene="arsC"
                     /locus_tag="JN001_002517"
                     /EC_number="1.20.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-dependent arsenate reductase"
                     /protein_id="HAY9053711.1"
                     /translation="MSNITIYHNPACGTSRNTLEMIRNSGTEPTIIHYLETPPTRDEL
                     VKLIADMGISVRALLRKNVEPYEELGLAEDKFTDDRLIDFMLQHPILINRPIVVTPLG
                     TRLCRPSEVVLEILPDAQKGAFSKEDGEKVVDEAGKRLK"
     gene            complement(1219..2508)
                     /gene="arsB"
                     /locus_tag="JN001_002518"
     CDS             complement(1219..2508)
                     /gene="arsB"
                     /locus_tag="JN001_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenite/antimonite:H(+) antiporter ArsB"
                     /protein_id="HAY9053712.1"
                     /translation="MLLAGAIFVLTIVLVIWQPKGLGIGWSATLGAVLALVTGVVHPG
                     DIPVVWNIVWNATAAFIAVIIISLLLDESGFFEWAALHVSRWGNGRGRLLFTWIVLLG
                     AAVAALFANDGAALILTPIVIAMLLALGFSKGTTLAFVMAAGFIADTASLPLIVSNLV
                     NIVSADFFGLGFREYASVMVPVDIAAIVATLVMLHLYFRKDIPQNYDMALLKSPAEAI
                     KDPATFKTGWVVLLLLLVGFFVLEPLGIPVSAIAAVGALILFVVAKRGHAINTGKVLR
                     GAPWQIVIFSLGMYLVVYGLRNAGLTEYLSGVLNVLADNGLWAATLGTGFLTAFLSSI
                     MNNMPTVLVGALSIDGSTASGVIKEAMVYANVIGCDLGPKITPIGSLATLLWLHVLSQ
                     KNMTISWGYYFRTGIIMTLPVLFVTLAALALRLSFTL"
     gene            complement(2563..2916)
                     /gene="arsR"
                     /locus_tag="JN001_002519"
     CDS             complement(2563..2916)
                     /gene="arsR"
                     /locus_tag="JN001_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="As(III)-sensing metalloregulatory
                     transcriptional repressor ArsR"
                     /protein_id="HAY9053713.1"
                     /translation="MSFLLPIQLFKILADETRLGIVLLLSELGELCVCDLCTALDQSQ
                     PKISRHLALLRESGLLLDRKQGKWVHYRLSPHIPAWAAKIIDEAWRCEQEKIQAIVRN
                     LARQNCSADSKNICS"
     gene            3655..3738
                     /locus_tag="JN001_002520"
     CDS             3655..3738
                     /locus_tag="JN001_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165328.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Damage inducible protein"
                     /protein_id="HAY9053714.1"
                     /translation="MIDKAIIVLGALIALLELIRFLLQLLN"
     gene            complement(3792..5144)
                     /gene="gorA"
                     /locus_tag="JN001_002521"
     CDS             complement(3792..5144)
                     /gene="gorA"
                     /locus_tag="JN001_002521"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003861215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HAY9053715.1"
                     /translation="MTKHYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVN
                     VGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWETLIASRTAYIDRIHTSYENV
                     LGKNNVDVIKGFARFVDAKMLEVNGETITADHILIATGGRPSHPDIPGVEYGIDSDGF
                     FALPALPERVAVVGAGYIAVELAGVINGLGAKTHLFVRKHAPLRSFDPMISETLVEVM
                     NAEGPQLHTNAIPKAVVKNADGSLTLELEDGRSETVDCLIWAIGREPANDNINLEAAG
                     VKTNEKGYIVVDKYQNTNIEGIYAVGDNTGAVELTPVAVAAGRRLSEHLFNNKPDEHL
                     DYSNIPTVVFSHPPIGTVGLTEPQAREQYGDDQVKVYKSSFTAMYTAVTTHRQPCRMK
                     LVCVGSEEKIVGIHGIGFGMDEMLQGFAVALKMGATKKDFDNTVAIHPTAAEEFVTMR
                     "
     gene            complement(5216..6058)
                     /locus_tag="JN001_002522"
     CDS             complement(5216..6058)
                     /locus_tag="JN001_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HAY9053716.1"
                     /translation="MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHAG
                     AGRYQLGSEHAERTGEYLEGIARIWQQDDLPAELEAYINVVKHFNRSGQLRYYPGSPL
                     IARQLLREQDSLQLTELHPSDYPLLRSEFQKDSRARVEKADGFQQLKAKLPPVSRRGL
                     ILIDPPYEMKTDYQAVVSGIAEGYKRFATGTYALWYPVVLRQQIKRMIHDLEATGIRK
                     ILQIELAVLPDSDRRGMTASGMIVINPPWKLEQQMNNVLPWLHSKLVPAGTGHATVSW
                     IVPE"
     gene            6261..8303
                     /gene="prlC"
                     /locus_tag="JN001_002523"
     CDS             6261..8303
                     /gene="prlC"
                     /locus_tag="JN001_002523"
                     /EC_number="3.4.24.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase A"
                     /protein_id="HAY9053717.1"
                     /translation="MTNPLLTPFELPPFSKILPEHVVPAVTQALNDCRENVERVVAQG
                     APYTWENLCQPLAEVDDVLGRIFSPVSHLNSVKNSPELREAYEQTLPLLSEYSTWVGQ
                     HEGLYKAYRDLRDGDHYATLNTAQKKAVDNALRDFELSGIGLPKEKQQRYGEIATRLS
                     ELGNQYSNNVLDATMGWTKLVTDEAELAGMPESALAAAKAQAEAKELEGYLLTLDIPS
                     YLPVMTYCDNQALREEMYRAYSTRASDQGPNAGKWDNSKVMEEILALRHELAQLLGFE
                     NYAFKSLATKMAENPQQVLDFLTDLAKRARPQGEKELAQLRAFAKAEFGVDELQPWDI
                     AYYSEKQKQHLYSISDEQLRPYFPENKAVNGLFEVVKRIYGITAKERKDVDVWHPDVR
                     FFELYDENNELRGSFYLDLYARENKRGGAWMDDCVGQMRKADGSLQKPVAYLTCNFNR
                     PVNGKPALFTHDEVITLFHEFGHGLHHMLTRIETAGVSGISGVPWDAVELPSQFMENW
                     CWEPEALAFISGHYETGEPLPKELLDKMLAAKNYQAALFILRQLEFGLFDFRLHAEFR
                     PDQGAKILETLAEIKKLVAVVPSPSWGRFPHAFSHIFAGGYAAGYYSYLWADVLAADA
                     FSRFEEEGIFNRETGQSFLDNILSRGGSEEPMDLFKRFRGREPQLDAMLEHYGIKG"
     gene            8311..9063
                     /gene="rsmJ"
                     /locus_tag="JN001_002524"
     CDS             8311..9063
                     /gene="rsmJ"
                     /locus_tag="JN001_002524"
                     /EC_number="2.1.1.242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709277.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1516)-N(2))-methyltransferase
                     RsmJ"
                     /protein_id="HAY9053718.1"
                     /translation="MKICLIDETGAGDGALSVLAARWGLEHDEDNLMALVLTPEHLEL
                     RKRDEPKLGGIFVDFVGGAMAHRRKFGGGRGEAVAKAVGIKGDYLPDVVDATAGLGRD
                     AFVLASVGCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTD
                     ITPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLVGPDLDADGLLEPARLLATKRVVVK
                     RPDYAPPLANVTTPNAVVTKGHRFDIYAGTPV"
     gene            complement(9112..10581)
                     /gene="dtpB"
                     /locus_tag="JN001_002525"
     CDS             complement(9112..10581)
                     /gene="dtpB"
                     /locus_tag="JN001_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide/tripeptide permease DtpB"
                     /protein_id="HAY9053719.1"
                     /translation="MNTTTPMGMLQQPRPFFMIFFVELWERFGYYGVQGVLAVFFVKQ
                     LGFSQEQAFVTFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGALVLAIGYFMTGMSL
                     LKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLIAL
                     SLAPVIADRFGYSVTYNLCGAGLIIALLVYIACRGMVKDIGSEPDFKPMSFSKLLYVL
                     LGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFRQAFKLDKTGRNKMFVAFVLML
                     EAVVFYILYAQMPTSLNFFAINNVHHEILGFSINSVSFQALNPFWVVLASPILAGIYT
                     HLGNKGKDLSMPMKFTLGMFMCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLG
                     ELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDNITDPLET
                     LPVYTNVFGKIGLVTLGVAVVMLLMVPWLKRMIATPESH"
     gene            complement(10899..11333)
                     /gene="uspA"
                     /locus_tag="JN001_002526"
     CDS             complement(10899..11333)
                     /gene="uspA"
                     /locus_tag="JN001_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspA"
                     /protein_id="HAY9053720.1"
                     /translation="MAYKHILIAVDLSPESKVLVEKAVSMARPYNAKVSLIHVDVNYS
                     DLYTGLIDVNLGDMQKRISEETHHALTELSTNAGYPITETLSGSGDLGQVLVDAIKKY
                     DMDLVVCGHHQDFWSKLMSSARQLINTVHVDMLIVPLRDEEE"
     gene            11724..12059
                     /gene="uspB"
                     /locus_tag="JN001_002527"
     CDS             11724..12059
                     /gene="uspB"
                     /locus_tag="JN001_002527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspB"
                     /protein_id="HAY9053721.1"
                     /translation="MISTVALFWALCVVCIVNMARYFSSLRALLVVLRNCDPLLYQYV
                     DGGGFFTSHGQPNKQVRLVWYIYAQRYRDHHDDEFIRRCERVRRQFILTSALCGLVVV
                     SLIALMIWH"
     gene            complement(12303..13802)
                     /gene="pitA"
                     /locus_tag="JN001_002528"
     CDS             complement(12303..13802)
                     /gene="pitA"
                     /locus_tag="JN001_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter PitA"
                     /protein_id="HAY9053722.1"
                     /translation="MLHLFAGLDLHTGLLLLLALAFVLFYEAINGFHDTANAVATVIY
                     TRAMRSQLAVVMAAVFNFLGVLLGGLSVAYAIVHMLPTDLLLNMGSSHGLAMVFSMLL
                     AAIIWNLGTWYFGLPASSSHTLIGAIIGIGLTNALMTGTSVVDALNIPKVLSIFGSLI
                     VSPIVGLVFAGGLIFLLRRYWSGTKKRARIHLTPAEREKKDGKKKPPFWTRIALILSA
                     IGVAFSHGANDGQKGIGLVMLVLIGVAPAGFVVNMNATGYEITRTRDAINNVEAYFEQ
                     HPALLKQATGADQLVPAPEAGATQPAEFHCHPSNTINALNRLKGMLTTDVESYDKLSL
                     DQRSQMRRIMLCVSDTIDKVVKIPGVSADDQRLLKKLKSDMLSTIEYAPVWIIMAVAL
                     ALGIGTMIGWRRVATTIGEKIGKKGMTYAQGMSAQMTAAVSIGLASYTGMPVSTTHVL
                     SSSVAGTMVVDGGGLQRKTVTSILMAWVFTLPAAVLLSGGLYWLSLQFL"
     gene            14034..15236
                     /locus_tag="JN001_002529"
     CDS             14034..15236
                     /locus_tag="JN001_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HAY9053723.1"
                     /translation="MERFDAIIIGAGAAGMFCSALAGQAGRRVLLIDNGKKPGRKILM
                     SGGGRCNFTNLYVEPGAYLSQNPHFCKSALARFTQWDFIDLVNKHGIAWHEKTLGQLF
                     CDDSAQQIVDMLVDECEKGNVTFRLRSEVLSVAKDETGFTLELNGMTVGCEKLVIATG
                     GLSMPGLGASPFGYKIAEQFGLNVLPTRAGLVPFTLHKPLLEELQVLAGVAVPSVITA
                     ENGTVFRENLLFTHRGLSGPAVLQISSYWQPGEFVSINLLPDVDLETFLNEQRNAHPN
                     QSLKNTLAVHLPKRLVERLQQLGQIPDVSLKQLNVRDQQALISTLTDWRVQPNGTEGY
                     RTAEVTLGGVDTNELSSRTMEARKVPGLYFIGEVMDVTGWLGGYNFQWAWSSAWACAQ
                     DLIAAKSS"
     gene            complement(15551..16603)
                     /locus_tag="JN001_002530"
     CDS             complement(15551..16603)
                     /locus_tag="JN001_002530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417948.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2776 domain-containing protein"
                     /protein_id="HAY9053724.1"
                     /translation="MNIYIGWLFKLIPLIMGLICIALGGFVLESSGQSEYFVAGHVLI
                     SLAAICLALFTTAFIIISQLTRGVNTFYNILFPIIGYAGSIITMIWGWALLAGNDVMA
                     DEFVAGYVIFGIGMIAACVSTVAASSGHFLLIPKNAAGSKSDGTPVQAYSSLIGNCLI
                     AVPVLLTLLGFIWSITLLRSADITPHYVAGHVLLGLTAICACLIGLVATIVHQTRNTF
                     STKEHWLWCYWVIFLGSITVLQGIYVLVSSDASARLAPGIILIYLGMICYSIFSKVWL
                     LALVWRRTCSLANRIPMIPVFTCLFCLFLASFLAEMAQTDMGYFIPSRVLVGLGAVCF
                     TLFSIVSILEAGSAKK"
BASE COUNT         4268 a         4237 c         4314 g         3800 t
ORIGIN      
        1 caatccacgt aacaatgggt attgtcgagc aactacagaa cggggtaacg gctcccaaca
       61 gagcagccag gagatagcct ctcccttttc tggcccccat catctgctgg attttatggt
      121 ctggcacctt ttgtcttatc aggctgacac cggcactaat cactataaac agcaacgaaa
      181 gctcgacggc gagaaacaca aacatctctg cggcatcttg cagcatcgca agccaactac
      241 tcatacgtaa cctcattgga taaatctata tttccagaat aatcgaaatg aaattcagat
      301 caagatattt ctggtattat cgaaatatca accagacaga ggggtgtcat atgcagttgg
      361 aagaagtcgc taaagcgctg aaagagctag gtcacccgac ccgtttgttc atatttaaac
      421 atcttgtcaa agccggggaa caagggttgc cggtcggtga gttgcaaaag cagcttggga
      481 tacctggctc cacactcagc caccatatat cagcactggt atcggtagga ctggtcaaac
      541 aaaaccgtga gagtcggacg ctgatgtgtg tttcgcaata cgcaatgctg gaagcgataa
      601 ttgaattctt acgcgaggag tgctgcgtaa atagcaaaat tgcctgatgc gctacgctct
      661 acatatttca tgccatatat tgaatttgca cggttttgta ggtcggataa gacgcgttag
      721 cgtcgcatcc gacataaaca aagcgcactt taccaactat cggcagtgga tatcgccgct
      781 ttatttcagg cgcttacccg cttcatcaac cactttctcg ccatcttcct tggagaatgc
      841 gcctttttgc gcatctggca gaatttccag caccacttct gaagggcggc acaggcgagt
      901 tcccagcggc gtcaccacaa tcgggcgatt aatcagaatc gggtgctgaa gcataaagtc
      961 gattaaccga tcgtcagtaa atttatcttc cgcaaggccc agctcctcat acggttcgac
     1021 gtttttacgc agcagcgcgc gtacggaaat ccccatatcg gcaatgagtt tgaccagttc
     1081 atcgcgcgtt ggcggagttt ccagataatg gataatggtc ggttctgtgc cgctgttgcg
     1141 gatcatctcc agcgtattac gcgacgtgcc gcaggccggg ttgtgataaa tggtaatgtt
     1201 gctcatatca gtatctcatt acaaagtgaa agagagacgt agcgccagcg cagccagcgt
     1261 cacaaacagc acaggcaggg tcatgataat ccctgtacgg aagtaatatc cccagctgat
     1321 agtcatattc ttctgcgaaa gtacgtgcag ccagagtagt gtagccaggc taccaattgg
     1381 ggtaattttc ggtcccaaat cgcagccaat cacattggca taaaccatcg cttctttgat
     1441 aacgccagat gccgtgctgc catcaatgga caacgcgcca accagtaccg tcggcatatt
     1501 gttcataata gaagagagga aggcggtgag gaatccggtg ccgagcgtcg cggcccacag
     1561 gccgttatcc gccagcacgt tgagtacgcc agaaagatat tccgttaatc cggcattgcg
     1621 caggccataa accaccagat acatgccgag cgagaagatg acaatttgcc agggggcacc
     1681 gcgcaggact ttacccgtat taatcgcatg accgcgttta gcgacgacaa ataatatcag
     1741 cgcgcccaca gctgcaatgg cgctcaccgg aatgccgagc ggttccagga cgaaaaatcc
     1801 caccagcaga agcagtaaaa caacccagcc agttttgaac gtagcaggat ctttgatcgc
     1861 ttctgcggga gatttcagca gcgccatatc gtagttctgc ggaatatctt tgcgaaaata
     1921 gagatgtagc atcaccagcg tggcaacaat cgcggcgata tccaccggca ccatcaccga
     1981 ggcgtattcg cgaaagccga ggccaaagaa atcagcggaa acgatattca ccaggttgga
     2041 gacaataagc ggcaggctgg cggtatcggc aatgaatccg gccgccatca cgaacgccag
     2101 cgtcgtgcct ttactgaatc ctaaagccag cagcatggcg atgacaatcg gcgtcaaaat
     2161 aagcgctgcg ccatcattgg caaacagggc ggcaacggca gcaccgagca ggacaatcca
     2221 ggtaaacagc aagcgaccac gaccattacc ccagcgtgag acgtgcagcg ccgcccattc
     2281 aaaaaagccg gactcatcca gcagcaggct gatgataatg acggcgataa acgcagccgt
     2341 cgcgttccag acgatattcc acaccaccgg aatatcaccc ggatggacca cgcccgtaac
     2401 taacgccagt actgcgccga gcgttgcact ccagccgatg cctaaacctt tcggctgcca
     2461 gataaccaat acaatggtca ggacaaagat agcgcctgcc agtaacataa tgcctcctgg
     2521 ataaaacaca tgcgaaaata catatgtgtt tagctaaatt ttttaactgc aaatgttctt
     2581 actgtctgcg gaacagtttt gtcgagccag gttgcggaca attgcctgaa tcttttcctg
     2641 ttcacatcgc caggcttcat caattatttt cgccgcccat gctggaatat gcggcgataa
     2701 gcggtaatga acccatttac cttgcttgcg gtccagcaat agcccgcttt cacgcagcaa
     2761 tgccaggtgg cgggagatct tgggctgcga ctggtcgaga gcagtgcaga gatcgcagac
     2821 gcataactct cccagttcgc tgagcagtaa aacgatgccc agacgggttt catcagcaag
     2881 aattttgaac aattggatgg gtaacagaaa tgacatattg cgctcctgat tgttgcaggt
     2941 agtgtctctc ttcgaagcgg ataagtcaaa aacatatatg atttaacgaa tgtgtaagtg
     3001 cagaggaagg taataggtgt gaattttgag ttggctattc atttgaaagg aggtctgaat
     3061 caggacgtaa aaaaaccgac tttgcgtcgg ttttttactt tccagccctg agttggtggc
     3121 tctggctgga gtgagagagt tcttatctaa cagctcaata ctattagcca gtggctaaca
     3181 ttgcaagaat tagcgatttc ttcagctggc ggagggagca cttcggtata tatcgcagtg
     3241 acgatttata tactttcact gggtcatcgt catattaagc cttgtccgaa tccggatgta
     3301 aaaaaccgac tttgcgtcgg ttttttactt tccagccctg agttggtggc tctgactgga
     3361 gtgagatagc catcatctaa cgcatcaatg ctaataccat actgaaacta ttgcaaggac
     3421 gtgctggttt tataacctgc atgtactgta tgattatcca gttagctctg aggcattttc
     3481 actctggcaa tgcgcataaa cgctttcaaa gtcctggtca gaagtacggg tggtgccgtt
     3541 aactgatgct ctggccggag tgagagagtt cttatctaac aatgagacat gcgccgtgac
     3601 aggcagtgga tgagtaagcg gatgcattct cactccatcg catggagaaa acgggtgatt
     3661 gataaagcaa tcatcgttct aggggcgtta attgcgctgc tggaactgat ccgctttctg
     3721 cttcagcttc tgaactgata gcggaaacgt aattaagggc taagagcaca ctactcttag
     3781 ccctttaaca tttaacgcat tgtcacgaac tcttctgccg ccgttgggtg aatggcgacg
     3841 gtattgtcga agtctttttt ggttgccccc atcttcagcg ccaccgcgaa gccctgcaac
     3901 atttcgtcca taccaaagcc aatgccgtga ataccgacaa tcttctcttc cgatccaacg
     3961 cacaccagct tcatgcggca cggctggcgg tgagtggtga cggcggtata catcgcggtg
     4021 aaagaggatt tatacacttt cacctgatcg tcgccatact gctcgcgcgc ctgcggttcc
     4081 gttaaaccaa cagtaccaat cggcggatgg ctgaagacca cggtcggaat gttgctgtaa
     4141 tccagatgct catccggctt gttattaaac aggtgttcag agagacggcg acccgctgca
     4201 actgccaccg gtgtcagctc cactgcaccc gtgttatcgc ccaccgcgta aataccttca
     4261 atgttggtgt tttgatattt atcgacgacg atatagcctt tttcgttggt tttaacgcca
     4321 gcggcttcga ggttgatgtt gtcattggca ggctcgcgac caatcgccca aatcaggcaa
     4381 tccaccgttt cactgcgacc atcttccagc tccagcgtca ggctaccatc ggcatttttc
     4441 actaccgctt tcgggatggc gttggtgtgc agctgcgggc cttcggcgtt catcacttcg
     4501 accagcgttt cggaaatcat cgggtcgaag ctgcgcagcg gcgcatgttt acgcacaaac
     4561 agatgcgttt tcgcgccgag gccgttaatc acgcccgcca gctcaacggc gatgtaaccc
     4621 gcgccaacaa ccgccacgcg ctctggcaaa gcaggaaggg cgaagaagcc atcagaatca
     4681 ataccgtatt ccacgcccgg aatatccggg tggctcggac gaccgcctgt ggcgatcaga
     4741 atatgatcgg ccgtgatggt ttcgccgttt acctccagca ttttggcatc aacgaagcgg
     4801 gcaaagcctt tgattacatc aacgttattt ttaccgagca cgttttcata ggaagtatga
     4861 atacggtcga tataggcggt acggctggcg atcaacgttt cccagttgaa cttgttgatg
     4921 gtggtatcga aaccataatc agggccgtac atatggatcg cttcacggat ttgcgccgcg
     4981 tgccacatca cttttttcgg cacgcagccg acgttcacgc aggtgccgcc cagctctttg
     5041 gcttcaatca gtgcgcattt ctggccgtac atagccgcgc ggttgatgga ggctataccg
     5101 ccgctgccgc cgccgatggc gatgtaatca tagtgtttag tcatgacaga gtgtccttat
     5161 cgttgattac cgcgattgta gcgcgagacg taataggtgc cagcaatggc tgcaattact
     5221 ccggcacgat ccagcttacg gtggcgtgcc cggtgcctgc cggaaccagt ttgctgtgca
     5281 gccacggcag cacgttattc atctgctgtt ccagtttcca cggcgggtta atcacaatca
     5341 tgccggaagc ggtcatgcca cggcgatcgc tgtctggcag taccgccagt tcaatttgca
     5401 gaattttgcg aataccggtc gcttccagat cgtggatcat gcgcttaatt tgctgacgca
     5461 gcaccaccgg ataccacagt gcgtaagtac cagtggcgaa acgtttgtaa ccttctgcta
     5521 tcccgctgac caccgcctga tagtcggttt tcatttcata cggcgggtcg ataaggatta
     5581 aaccacggcg ggaaaccggc ggcagtttgg ccttaagctg ctggaaacca tcggcttttt
     5641 cgacgcgcgc acggctgtct ttctgaaatt cagaacgcag caacgggtaa tcgctcgggt
     5701 gcagttcggt cagttgcagg ctgtcttgtt cgcgcagtag ctggcgagca atcaatggcg
     5761 aaccggggta gtaacgcaac tgaccgctac ggttgaagtg ttttaccaca ttgatgtacg
     5821 cctccagttc tgcgggcaaa tcgtcctgct gccagatacg ggcgatgcct tcgagatatt
     5881 cgccggtacg ctcggcatgt tcgctgccta actgataacg cccggcccct gcgtgggtgt
     5941 cgagatagag aaacggttta tctttctctt tcagcgactc gatgatcagg ctctgaacgg
     6001 tatgtttaag gacgtcggcg tggttgccag cgtgaaagct gtggcgataa ctgagcatgg
     6061 gtaaaggtgt tccggtaagt aaaaatcggc ccgtattcgg ggcgcacaaa agcgtatcag
     6121 gacagtatac cgaaaagagg ccgccgccgc gaaagcgtaa cgtttctcat tgaaattcac
     6181 tacacttaac cccatgctac acacattatg taaagcgcct gttgagcgct tccttaacct
     6241 ctttaaccag gactgcgcga atgacgaatc cgttactgac tccctttgaa ttgcctccgt
     6301 tttctaaaat tctcccggaa catgtcgttc cagccgtgac tcaggcgctg aacgattgcc
     6361 gcgaaaatgt ggagcgcgta gtagcgcaag gggcaccgta cacctgggaa aatctctgcc
     6421 agccgttggc ggaagtggac gatgtgttgg ggcgtatctt ctccccggtc agccacctga
     6481 actcggtgaa aaatagcccg gaactgcgtg aagcctacga gcaaaccctg ccgctgctgt
     6541 cggaatacag cacctgggta gggcaacatg aagggctgta taaagcgtac cgcgacctgc
     6601 gcgatggcga tcattacgcc acgctgaaca cggcgcagaa gaaagcggtt gataacgccc
     6661 tgcgtgattt tgaactctct ggcataggtc tgccgaaaga gaaacagcag cgttacggcg
     6721 aaattgcgac ccgtctttct gaactgggca accagtacag caacaacgtc ctcgatgcga
     6781 caatgggctg gaccaaactc gttaccgacg aagcggagct ggcggggatg cctgaaagcg
     6841 cgctggctgc ggcaaaagcc caggccgaag cgaaagagct ggaaggctac ctgctgacgc
     6901 tggatatccc aagctacctg ccggtaatga cctactgcga caaccaggcc ttgcgtgaag
     6961 agatgtatcg cgcttacagc acccgcgcct ccgatcaagg cccgaacgcc ggtaaatggg
     7021 ataacagcaa ggtgatggaa gagatcctcg ctctgcgtca cgaactggcg caactgctgg
     7081 gctttgaaaa ctacgccttt aaatcccttg ccactaaaat ggcagaaaac ccgcagcagg
     7141 tgctggattt cttaaccgat ctggcaaaac gcgcgcgtcc gcaaggcgaa aaagagctgg
     7201 cacaactgcg cgccttcgcc aaagcggaat ttggcgtcga tgagttgcag ccgtgggata
     7261 tcgcgtacta cagcgaaaaa caaaaacagc acctctacag catcagtgac gaacagctgc
     7321 gtccgtactt cccggaaaac aaagcggtta acggcctgtt tgaagtggtg aaacgtattt
     7381 acggcatcac cgctaaagag cgtaaagatg ttgatgtctg gcatccggat gtacgtttct
     7441 tcgaactgta tgacgagaac aacgaactgc gcggcagctt ctacctcgat ctgtatgccc
     7501 gtgaaaacaa gcgcggcggg gcgtggatgg atgactgcgt aggccagatg cgtaaagctg
     7561 acggttctct gcaaaaaccg gtcgcgtatt tgacttgtaa cttcaaccgc ccggtaaatg
     7621 gtaaaccggc gctgttcact cacgacgaag tgatcaccct gttccacgag ttcggtcacg
     7681 gtctgcacca tatgctgacc cgcatcgaaa ccgctggtgt ttccggtatc agcggtgtgc
     7741 cgtgggatgc ggtcgaactg ccgagtcagt ttatggaaaa ctggtgctgg gagccggagg
     7801 cgctggcgtt tatctctggt cactatgaaa ccggcgaacc gctgccgaaa gagttgctgg
     7861 ataaaatgct ggcggcgaag aactaccagg cggcgctgtt tattctgcgc cagctggagt
     7921 tcggcctgtt cgatttccgc ctccatgccg agttccgccc ggatcagggt gcgaaaatcc
     7981 tcgaaactct ggcagaaatc aagaaactgg ttgccgtagt accgtctcca tcctggggcc
     8041 gtttcccgca cgctttcagc catattttcg ccggtggtta tgccgcaggt tactacagct
     8101 acctgtgggc tgacgtactg gcggcagatg ccttctcgcg ctttgaggaa gagggcattt
     8161 tcaaccgtga aaccgggcag tcgttcctcg acaacattct gagccgtggc ggttcagaag
     8221 agccgatgga tctgttcaaa cgcttccgtg gtcgtgaacc gcagctggat gcgatgctgg
     8281 agcattacgg cattaagggc tgatcattca gtgaaaatct gcttaattga tgaaacaggc
     8341 gccggagacg gcgccttatc tgttctggcg gcccgctggg ggctggagca cgatgaagac
     8401 aacctgatgg cgctggtgtt aacgccggaa catctggaat tgcgcaagcg tgatgagcca
     8461 aaacttggcg gcatctttgt tgattttgtt ggcggagcga tggcgcaccg acgcaaattc
     8521 ggcggtggtc gcggtgaggc ggtggcgaaa gcggtgggca ttaaaggcga ttatttgccg
     8581 gatgtggtgg acgccaccgc agggctgggg cgcgatgcct ttgtactggc ttcagtcggc
     8641 tgccgcgtgc ggatgctgga gcgtaatcca gtggttgccg cgctactcga cgacggcctg
     8701 gcgcgtggtt atgcggatgc ggaaatcggc ggctggttgc aggagcggtt gcagttaatt
     8761 cacgcctcca gcctgacggc gctaaccgat attaccccac gcccgcaggt ggtctatctc
     8821 gatccgatgt tcccgcataa gcagaaaagc gcgctagtga aaaaagagat gcgtgtcttt
     8881 cagtcgctgg tgggaccgga tcttgatgcc gatggattac tggagcctgc acgcttgctg
     8941 gcgaccaaac gcgtggtggt aaagcgcccg gactacgcgc caccgctagc gaatgtcacc
     9001 acgccaaacg cggttgtgac taaagggcat cgctttgata tctatgcagg tacgcccgtg
     9061 taaaagtaaa gcagggtagc gataacgcta ccctgctttc tgcaagaata attaatggct
     9121 ttccggcgtc gcaatcatgc gtttcagcca cggcaccatc aacagcatca ctactgcaac
     9181 gcccagcgtg accagaccaa tcttaccaaa cacgttggta tagacgggca acgtctcaag
     9241 cggatcggta atgttgtccg gcaccgcggt aaatgttgcc acatagccgc ccagcaagaa
     9301 cgcggcagcc tgcgtcagga accacatccc gagaataaag cccatcaaat gctgcggcac
     9361 cagggcagca atcatcgcca ggccaagggc gctaataaac agttcaccta agctctggaa
     9421 taagtacacc agcacgataa accatggcga tgtcagccct tgtgcatccg caaaccacat
     9481 tcccgcagct gccgccgtca aaaagcccag tgagcacata aacatgccga gagtaaattt
     9541 catcggcatc gagaggtctt tgcctttgtt acccagatgc gtgtaaatgc ctgccagtat
     9601 tgggctggcg agtaccaccc agaacgggtt aagcgcctgg aagctgaccg agttgatgga
     9661 aaaaccgaga atttcatgat gcacgttgtt gatggcaaag aagttcagcg atgttggcat
     9721 ctgggcgtag agaatgtaaa acaccaccgc ttcgagcatc aggacaaagg cgacaaacat
     9781 tttattgcgc ccggttttat ccagcttgaa tgcctgacga aagaagatga tggtgacgac
     9841 gatggagaga acaatcagca ccagattggc gacttctacg ttgtgcatca gccatgcaca
     9901 tacgaagatc atcaccacgc tgccaagtaa tacgtacaac agtttgctga agctcatcgg
     9961 cttgaagtcg ggttcagaac caatgtcttt caccattcca cgacaggcga tgtaaaccag
    10021 taatgcgata attaaccccg ccccgcacag gttgtaggtg actgaataac cgaatctatc
    10081 agcgatcaca ggggccagcg ataacgctat caacgagccg atattgatcg acatatagaa
    10141 cagggtgaat gcgccatcaa gccgcggatc tttcggcgga tagcacttcg aaagcaagct
    10201 ggctgggtta gctttaaaca ggccgttacc gacagcgata gtccccaggg cgatgaaaat
    10261 caggtcaggc ttaagtagcg acatgccggt catgaagtag ccaatcgcca gcacaagtgc
    10321 tccgagaaca atggtgcgtt tggtccccag caggtggtcg ccgacatagc cgccaatgga
    10381 aatgaggcca tagaccagcg cagcaaaagc accaaaagtg acaaaagcct gctcttgcga
    10441 gaatccaagc tgtttaacga agaaaaccgc cagtacgccc tgcacgccgt agtagccgaa
    10501 tcgctcccat aactcgacaa aaaagatcat gaaaaatggg cgaggttgct gcagcatccc
    10561 catgggtgtt gttgtattca tatttattaa ccttccaata ccatcctgaa aagtatgaac
    10621 gcgtaaggga taacgcgcga aaaagtttac atctgtcaga gattcttaat attgatgcgg
    10681 tgaatggatt aatacactat tacaacagaa aataaccagc taatcacact aatgatggaa
    10741 aatatgatgg tgttaaatgt tgtattggca ggagattttg attgcgtacg cagatcgtag
    10801 gccagataag gggtttacgc tgcatcaggt aacaaggcgc gccaaaaagc aaaacgcccg
    10861 catatgcggg cgttcaggaa cacgtcgtgg agggaagatt attcttcttc gtcgcgcagc
    10921 ggaacaatca gcatatcaac gtgaacggtg ttgatcagct gacgtgcgga agacatcagt
    10981 ttgctccaga agtcctggtg gtgaccacaa accaccagat ccatatcgta tttcttgatt
    11041 gcatcgacca gaacctggcc caggtcgccg ctgccgctca gggtttcagt gattgggtag
    11101 cctgcattag tggaaagctc ggtcagcgca tgatgtgtct cttcagagat gcgtttctgc
    11161 atatcaccca gattcacatc aataagcccg gtgtataggt cagagtagtt tacatctacg
    11221 tggatcagag aaactttcgc attgtagggg cgagccatag agactgcttt ctctaccaga
    11281 actttgcttt ccggggagag atcgaccgcg atgagaatgt gtttataagc catagtgtta
    11341 ctccttccat aaagttgtcg atgactggcc agctagcgtt tcttgtgccg ttacgtcacc
    11401 cgcgtcctgc gaactacgtg cgcggggcta acccagccgt aaagattcag tgttaagacc
    11461 atccttacct tatagcgacc cggatgatcc gtcaatccgc cttgcttacc cgttagataa
    11521 acaaattttc gacatgaata tattgatagt ggttaacctt ctggaaaaaa aacaacctga
    11581 tctcctacac tatctataga gccgctcgga tgttggtcac cacaaaagcg gtttctccag
    11641 gacctggtgt taactgattg gcagcgtatc gggagcggta gccccggggt ggaactccgc
    11701 gggcaggtcg ccggggagga ggtatgataa gcaccgtcgc attattttgg gctttatgtg
    11761 tcgtttgcat tgttaacatg gcgcgctatt tctcatcact acgcgcgttg ttagtggtac
    11821 tgcgtaactg cgatccattg ctctatcaat atgttgatgg agggggcttt tttacctcac
    11881 atggccaacc caacaaacag gtgcgtctcg tttggtatat ctatgcccaa cgttatcgcg
    11941 atcatcacga tgatgagttt attcgccgct gtgagcgggt gcgtcggcag tttattctga
    12001 ctagcgcatt gtgtggtctg gtggtggtca gcctgattgc attgatgatt tggcattaag
    12061 cacttcagca ataataacgc ataaaaaaag ctggccagta aactgacccg ctcgagactg
    12121 attacaaacg caaaattgcc tgatgcgcta cgcttatcag gcctgcataa tctctgcaat
    12181 ctattgaatt tgcatgtttt tgtaggccga ataaggcgtt cacgccgcat ccggcatgaa
    12241 caaagcgcac tatgtcacaa tctgaagcgg gccagctgac ccgctcgttt tggtgcgtac
    12301 gattacagga actgcaagga gagccagtac agcccgccgg aaagcagtac cgcagccgga
    12361 agggtaaaca cccaggccat cagaatgctg gtcacggttt tacgctgtaa gccgccacca
    12421 tctaccacca tcgtccccgc gacagaagag gagagtacgt gagtagtgga aaccggcatc
    12481 ccggtataac tcgccaggcc gatagacact gccgccgtca tctgggcaga catcccctga
    12541 gcgtaggtca tgcctttctt accgattttc tcaccgatag tcgttgccac acgacgccag
    12601 ccaatcatcg taccgatacc taacgccagc gcgaccgcca tgatgatcca caccggtgca
    12661 tactcgatgg tgctaagcat gtcggacttc agtttcttca acaggcgctg atcgtcagca
    12721 ctcacgccag gtatcttcac tactttgtcg atagtgtcag aaacgcacag cataatgcgg
    12781 cgcatctggc tacgttgatc aagcgacagc ttgtcgtagc tttccacatc ggtagttaac
    12841 atacctttca ggcggttgag cgcgttaatg gtattcgacg gatggcaatg gaactccgcg
    12901 ggttgcgttg cgccagcttc cggagccggt actaactgat cagcaccggt agcctgtttc
    12961 agcagcgcag gatgctgctc aaagtaagct tcgacgttgt tgatggcatc acgggtacgg
    13021 gtgatttcgt agccagtggc attcatattc accacgaagc ctgctggtgc gacaccaatc
    13081 aataccaaca taaccagacc aatgcctttc tgaccatcgt tcgcgccgtg cgaaaacgcc
    13141 acgccgatag cggaaaggat cagcgcaata cgcgtccaga acggcggctt tttcttgccg
    13201 tctttctttt cacgctccgc tggggtcagg tggatacggg cgcgtttctt ggtgccgctc
    13261 cagtagcgac gcagcaagaa aatcagaccg ccagcaaaca ccaggccgac aataggggaa
    13321 acaatcagag aaccgaaaat acttaatact ttcgggatat tgagtgcatc caccactgac
    13381 gtcccggtca tcaacgcatt ggttaaacca atcccgatga tcgcgccaat cagtgtatga
    13441 gagctggatg caggtaaacc aaagtaccag gtacccaggt tccagataat cgccgccagc
    13501 aacatagaga acaccatggc aaggccatga gacgatccca tattaagcag cagatccgtc
    13561 ggcagcatat gcacaatggc ataggcaaca ctcagaccac ccagcaaaac acccaaaaag
    13621 ttgaacaccg ccgccataac cacggcgagc tgagaacgca tcgcgcgggt atagataacg
    13681 gttgccacgg cgttggctgt gtcatggaaa ccattgatgg cttcgtagaa cagcacaaaa
    13741 gccagtgcaa gcaataataa cagcccggta tgcaaatcca ggccagcaaa caaatgtagc
    13801 ataggacgtt acgccatttt gaggacatga acgcggcgca ttatcagtga ctttcgcggc
    13861 gcgggcaaag tgaaatatag actttttttg atttgcctcc tgtatggatt tcactcaaaa
    13921 aataattatc ttatataatt caggcaaata cttcctttta gtaatattga tgctggtgtg
    13981 accactgagg aatctttaca attcacgccc gttttttcta agaggagcgc aacgtggaaa
    14041 ggtttgatgc cattattata ggcgctggtg cggcgggtat gttctgttct gcgctggcag
    14101 gtcaggcagg acgccgggtt ctgctgatcg ataatggtaa aaaaccaggg cgcaaaatcc
    14161 ttatgtctgg cggtgggcgc tgcaacttta ccaaccttta tgtcgaacca ggcgcttatc
    14221 tgagccagaa tccgcatttt tgtaagtctg cactcgcgcg ttttacccag tgggatttca
    14281 ttgatctggt caataaacac ggcatcgcct ggcacgagaa aacgttagga caactcttct
    14341 gcgatgactc cgcgcagcag attgtcgaca tgctggtgga tgagtgcgag aagggcaatg
    14401 taaccttcag attgcgtagc gaagtgctga gtgtggcgaa ggatgaaaca ggcttcacgc
    14461 ttgaactgaa cggcatgact gtcggttgcg aaaagctggt catcgcgacc ggtgggctgt
    14521 caatgccggg gctgggcgca tcgccgtttg gttataagat tgccgaacaa tttggcctca
    14581 acgtgctgcc gacccgtgcg ggtctggtgc cattcactct gcataaaccg ttgctcgaag
    14641 agttacaggt gctggcgggc gtggcggtgc cttccgtgat taccgctgaa aacggcaccg
    14701 ttttccgtga gaacttactc ttcacccacc gcggcttatc tggaccggcg gtgttgcaga
    14761 tttccagcta ctggcaaccg ggtgaatttg tcagtatcaa tctgctaccg gatgtggacc
    14821 tcgaaacctt cctgaatgag cagcgtaacg cacatccgaa tcagagcctg aaaaacacac
    14881 tggcggttca tctaccgaag cggttggttg aacgcttaca gcaactcggg caaatcccgg
    14941 atgtttcgct aaaacagctc aacgtgcgtg accaacaggc actgattagc acattgaccg
    15001 actggcgcgt acaacccaac ggcactgaag gctatcgcac tgccgaagtg acgctcggcg
    15061 gcgtggacac caacgaactc tcttcacgga cgatggaagc gcgcaaagtg cctgggctgt
    15121 acttcatcgg cgaagtgatg gacgttaccg gctggctggg gggctataac ttccagtggg
    15181 cgtggtcgag tgcgtgggct tgtgcgcagg atttgattgc agcgaagtcg tcctgacctg
    15241 ttacctaaag atgaaaatta ttagagccgc attaaaaatg agctaatttt gatagtggct
    15301 atcttgtgat tattttctaa tgagcccgtg aactgaaacc ctccaggctt aatataaggt
    15361 ggaaggaaag atgattgaaa actcacccag tggccagatc tttataaaat atgaacaggc
    15421 tgaaaaagac agtaactttg ttgtttttta tccttaacca ctatgcatta atgctgcgtt
    15481 atttcatgat gcctaagaaa aaccagcgtt acgcaaatgg tcaacgctgg ttttatccgg
    15541 tacgttgcaa ttatttttta gcagaacctg cttctaatat tgaaacgatt gagaacaacg
    15601 taaagcatac cgctcccaaa ccgaccaaaa cccgcgaagg aataaaatat cccatgtcgg
    15661 tctgcgccat ttccgcaaga aacgatgcca ggaaaaggca aaacaggcag gtgaagacgg
    15721 gaatcatcgg tattctgttg gctaacgaac aggtacgtct ccataccagt gccagtagcc
    15781 agacttttga gaatatgctg taacagatca ttccgaggta aataagaata atgccgggag
    15841 ccagtcgggc gcttgcatcg gaactgacta agacgtatat cccctgcagt accgtgattg
    15901 agccgagaaa aataacccaa taacaccaca gccagtgttc tttagttgaa aacgtattac
    15961 gtgtttgatg gacaattgtg gcaacaaggc caattagaca ggcacagatt gcggttaacc
    16021 caagcaatac gtgacccgcg acataatgcg gagttatgtc agcactacgt aacagcgtaa
    16081 tagaccaaat gaaaccgagc agggtgagta aaacgggaac ggcaatgagg cagttaccga
    16141 ttaatgaaga ataagcctgt accggtgttc cgtcgctctt gctccccgct gcatttttgg
    16201 gaatgagcag aaagtgaccg gacgacgctg ccaccgtcga tacacatgcg gcaatcatac
    16261 caatgccgaa aataacatag ccggcgacaa actcgtctgc catcacatca ttgcctgcta
    16321 acagtgccca accccatatc atggtgataa ttgaccctgc atagccaata atggggaaca
    16381 atatattgta aaacgtatta acgccgcgcg tgagctgcga aatgataata aatgcggtag
    16441 tgaataatgc caggcatatg gctgccagag aaatcagcac atgacccgcg acgaaatact
    16501 cgctttgccc tgaactttcc agcacaaagc cacctaacgc gatacaaatt aagcccataa
    16561 tcaaagggat taatttgaaa agccacccga tatatatgtt cactttaaac tcctcaggt
//
LOCUS       DADMJE010000088        16537 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.089, whole genome shotgun sequence.
ACCESSION   DADMJE010000088 DADMJE010000000
VERSION     DADMJE010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16537)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16537)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16537
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.089"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(45..190)
                     /locus_tag="JN001_002531"
                     /pseudo
     CDS             complement(45..190)
                     /locus_tag="JN001_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001626279.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytoplasmic protein"
     gene            complement(299..393)
                     /locus_tag="JN001_002532"
     tRNA            complement(299..393)
                     /locus_tag="JN001_002532"
                     /product="tRNA-Sec"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(357..359),aa:Sec,seq:tca)
     gene            686..2068
                     /locus_tag="JN001_002533"
     CDS             686..2068
                     /locus_tag="JN001_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418114.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside-pentoside-hexuronide family
                     transporter"
                     /protein_id="HAY9053725.1"
                     /translation="MKSEVLSVKEKIGYGMGDAASHIIFDNVMLYMMFFYTDIFGIPA
                     GFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPD
                     LSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGM
                     LSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPPTTTSMR
                     EDLRDIWQNDQWRIVGLLTIFNILAVCVLGGAMMYYVTWILGTPEVFVAFLTTYCVGN
                     LIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQL
                     VTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGYDA
                     AEKAQNSATISIIIALFTIVPAICYLLSAIIAKRYYSLTTHNLKTVMEQLAQGKRRCQ
                     QQFTSQEVQN"
     gene            2078..4369
                     /gene="yicI"
                     /locus_tag="JN001_002534"
     CDS             2078..4369
                     /gene="yicI"
                     /locus_tag="JN001_002534"
                     /EC_number="3.2.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-xylosidase"
                     /protein_id="HAY9053726.1"
                     /translation="MKISDGNWLIQPGLNLIHPLQVFEVEQQDNEMVVYAAPRDVRER
                     TWQLDTPLFTLRFFSPQEGIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAE
                     FKSGNLSARVSKGEFWSLDFLRNGERITGQDTNNQRNYMFERLDLGVGETVYGLGERF
                     TALVRNGQTVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQSVSFEVGSEKVSK
                     VQFSVESEYLEYFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGLWLTTSFTTNYDEAT
                     VNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPEGMIRRLKAKGLKIC
                     VWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADK
                     LKGLVAMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAHIYNELVWNVLKDTVGEE
                     EAVLFARSASVGAQKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHYIGGFEN
                     TAPAHVYKCWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYR
                     EAARANARGTPMMRAMMMEFPDDPACDYLDRQYMLGDNVMVAPVFTEAGDVQFYLPEG
                     RWTHLWHNDELDGRCWHKQQHSFLSLPIYVRDNTLLALGNNDQRPDYAWHEGTAFHLF
                     NLQDGHEAVCEVPAADGSVIFTLKAARTGNTITVTGAGEAKNWTLCLRNVVKVNGLQD
                     GSQAESEQGLVVKPQGNALTITL"
     gene            complement(4422..6131)
                     /locus_tag="JN001_002535"
     CDS             complement(4422..6131)
                     /locus_tag="JN001_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HAY9053727.1"
                     /translation="MKFIGKLLLYILIALLVVIAGLYFLLQTRWGAEHISAWVSENSD
                     YHLAFGAMDHRFSAPSHIVLENVTFGRDGQPATLVAKSVDIALSSRQLTEPRHVDTIL
                     LENGTLNLTDQTAPLPFKADRLQLRDMAFNSPNSEWKLSAQRVNGGVVPWSPKAGKVL
                     GTKAQIQFSAGSLSLNDVPATNVLIEGSIDNDRVTLTNLGADIARGTLTGNAQRNADG
                     SWQVENLRMADIRLQSEKSLTDFFAPLRSVPSLQIGRLEVIDAHLQGPDWAVTDLDLS
                     LRNMTFSKDDWQTQEGKLLMNASEFIYGSLHLFDPIINAEFSPQGVALRQFTSRWEGG
                     MVRTSGNWLRDGKTLILDDAAIAGLEYTLPKNWQQLWMETTPGWLNSLQLKRFSASRN
                     LIIDIDPDFPWQLTTLDGYGANLTLVTDHKWGVWSGSANLNAAAATFNRVDVRRPSLA
                     LTANSSTVNISELSAFTEKGILEATASVSQTPQRQTHISLNGRGVPVNILQQWGWPEL
                     PLTGDGNIQLTASGDIQANAPLKPTVSGQLHAVNAAKQQVTQTMNAGIVSSGEVTSAE
                     LVQ"
     gene            complement(6252..7643)
                     /gene="xanP"
                     /locus_tag="JN001_002536"
     CDS             complement(6252..7643)
                     /gene="xanP"
                     /locus_tag="JN001_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine/proton symporter XanP"
                     /protein_id="HAY9053728.1"
                     /translation="MSVSTLESENAQPVAQTQNSELIYRLEDRPPLPQTLFAACQHLL
                     AMFVAVITPALLICQALGLPAQDTQHIISMSLFASGVASIIQIKTWGPVGSGLLSIQG
                     TSFNFVAPLIMGGTALKTGGADVPTMMAALFGTLMLASCTEMVISRVLHLARRIITPL
                     VSGVVVMIIGLSLIQVGLTSIGGGYAAMSDNTFGAPKNLLLAGVVLALIILLNRQRNP
                     YLRVASLVIAMAAGYALAWFMGMLPESNEPMTQELIMVPTPLYYGLGIEWSLLLPLML
                     VFMITSLETIGDITSTSDVSEQPVSGPLYMKRLKGGVLANGLNSFVSAVFNTFPNSCF
                     GQNNGVIQLTGVASRYVGFVVALMLIVLGLFPAVSGFVQHIPEPVLGGATLVMFGTIA
                     ASGVRIVSREPLNRRAILIIALSLAVGLGVSQQPLILQFAPEWLKNLLSSGIAAGGIT
                     AIVLNLIFPPEKQ"
     gene            7923..9128
                     /gene="gltS"
                     /locus_tag="JN001_002537"
     CDS             7923..9128
                     /gene="gltS"
                     /locus_tag="JN001_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium/glutamate symporter"
                     /protein_id="HAY9053729.1"
                     /translation="MFHLDTLATLVAATLTLLLGRKLVHSVSFLKKYTIPEPVAGGLL
                     VALALLVLKKSMGWEVNFDMSLRDPLMLAFFATIGLNANIASLRAGGRVVGIFLIVVV
                     GLLVMQNAIGIGMASLLGLDPLMGLLAGSITLSGGHGTGAAWSKLFIERYGFTNATEV
                     AMACATFGLVLGGLIGGPVARYLVKHSTTPNGIPDDQEVPTAFEKPDVGRMITSLVLI
                     ETIALIAICLTVGKIVAQLLAGTAFELPTFVCVLFVGVILSNGLSIMGFYRVFERAVS
                     VLGNVSLSLFLAMALMGLKLWELASLALPMLAILVVQTIFMALYAIFVTWRMMGKNYD
                     AAVLAAGHCGFGLGATPTAIANMQAITERFGPSHMAFLVVPMVGAFFIDIVNALVIKL
                     YLMLPIFAG"
     gene            complement(9162..11243)
                     /gene="recG"
                     /locus_tag="JN001_002538"
     CDS             complement(9162..11243)
                     /gene="recG"
                     /locus_tag="JN001_002538"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HAY9053730.1"
                     /translation="MTGRLLDAVPLSSLTGVGAALSNKLAKINLHTVQDLLLHLPLRY
                     EDRTHLYPIGELLPGVYATVEGEVLNCNISFGGRRMMTCQISDGSGILTMRFFNFSAA
                     MKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRVQGDLSTPELQETLTPVYPTTEGVKQ
                     ATLRKLTDQALDLLDTCAIEELLPPELSQGMMTLPEALRTLHRPPPTLQLSDLETGQH
                     PAQRRLILEELLAHNLSMLALRAGAQRFHAQPLSANDALKNKLLAALPFKPTGAQARV
                     VAEIERDMALDVPMMRLVQGDVGSGKTLVAALAALRAIAHGKQVALMAPTELLAEQHA
                     NNFRNWFEPLGIEVGWLAGKQKGKARLSQQEAIASGQVQMIVGTHAIFQEQVQFNGLA
                     LVIIDEQHRFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
                     LPPGRTPVTTVAIPDTRRTDIIDRVRHACITEGRQAYWVCTLIEESELLEAQAAEATW
                     EELKLALPELNVGLVHGRMKPAEKQAVMASFKQGELHLLVATTVIEVGVDVPNASLMI
                     IENPERLGLAQLHQLRGRVGRGAVASHCVLLYKTPLSKTAQIRLQVLRDSNDGFVIAQ
                     KDLEIRGPGELLGTRQTGNAEFKVADLLRDQAMIPEVQRLARHIHERYPQQAKALIER
                     WMPETERYSNA"
     gene            complement(11249..11938)
                     /gene="trmH"
                     /locus_tag="JN001_002539"
     CDS             complement(11249..11938)
                     /gene="trmH"
                     /locus_tag="JN001_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(18)-2'-O)-methyltransferase
                     TrmH"
                     /protein_id="HAY9053731.1"
                     /translation="MNPTRYARICEMLARRQPDLTVCMEQVHKPHNVSAIIRTADAVG
                     VHEVHAVWPGSRMRTMASAAAGSNSWVQVKTHRTIGDAVAHLKGQGMQILATHLSDNA
                     VDFREIDYTRPTCILMGQEKTGITQEALALADQDIIIPMIGMVQSLNVSVASALILYE
                     AQRQRQNAGMYLRENSMLPEAEQQRLLFEGGYPVLAKVAKRKGLPYPHVNQQGEIEAD
                     ADWWATMQAAG"
     gene            complement(11945..14053)
                     /gene="spoT"
                     /locus_tag="JN001_002540"
     CDS             complement(11945..14053)
                     /gene="spoT"
                     /locus_tag="JN001_002540"
                     /EC_number="3.1.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional GTP
                     diphosphokinase/guanosine-3',5'-bis pyrophosphate
                     3'-pyrophosphohydrolase"
                     /protein_id="HAY9053732.1"
                     /translation="MYLFESLNQLIQTYLPEDQIKRLRQAYLVARDAHEGQTRSSGEP
                     YITHPVAVACILAEMKLDYETLMAALLHDVIEDTPATYQDMEQLFGKSVAELVEGVSK
                     LDKLKFRDKKEAQAENFRKMIMAMVQDIRVILIKLADRTHNMRTLGSLRPDKRRRIAR
                     ETLEIYSPLAHRLGIHHIKTELEELGFEALYPNRYRVIKEVVKAARGNRKEMIQKILS
                     EIEGRLQEAGIPCRVSGREKHLYSIYCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRV
                     LGQMHSLYKPRPGRVKDYIAIPKANGYQSLHTSMIGPHGVPVEVQIRTEDMDQMAEMG
                     VAAHWAYKEHGETSTTAQIRAQRWMQSLLELQQSAGSSFEFIESVKSDLFPDEIYVFT
                     PEGRIVELPAGATPVDFAYAVHTDIGHACVGARVDRQPYPLSQPLTSGQTVEIITAPG
                     ARPNAAWLNFVVSSKARAKIRQLLKNLKRDDSVSLGRRLLNHALGGSRKLNEIPQENI
                     QRELDRMKLATLDDLLAEIGLGNAMSVVVAKNLQHGDASIPPATQSHGHLPIKGADGV
                     LITFAKCCRPIPGDPIIAHVSPGKGLVIHHESCRNIRGYQKEPEKFMAVEWDKETAQE
                     FITEIKVEMFNHQGALANLTAAINTTTSNIQSLNTEEKDGRVYSAFIRLTARDRVHLA
                     NIMRKIRVMPDVIKVTRNRN"
     gene            complement(14072..14347)
                     /gene="rpoZ"
                     /locus_tag="JN001_002541"
     CDS             complement(14072..14347)
                     /gene="rpoZ"
                     /locus_tag="JN001_002541"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013511051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HAY9053733.1"
                     /translation="MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVPEEND
                     KTTVIALREIEEGLINNQILDVRERQEQQEQEAAELQAVTAIAEGRR"
     gene            complement(14402..15025)
                     /gene="gmk"
                     /locus_tag="JN001_002542"
     CDS             complement(14402..15025)
                     /gene="gmk"
                     /locus_tag="JN001_002542"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HAY9053734.1"
                     /translation="MAQGTLYIVSAPSGAGKSSLIQALLKTQPLYDTQVSVSHTTRQP
                     RPGEVHGEHYFFVNHDEFKEMISRDAFLEHAEVFGNYYGTSREAIEQVLATGVDVFLD
                     IDWQGAQQIRQKMPHARSIFILPPSKIELDRRLRGRGQDSEEVIAKRMAQAVAEMSHY
                     DEYDYLIVNDDFDTALTDLKTIIRAERLRMSRQKQRHDALISKLLAD"
     gene            15283..>16537
                     /gene="ligB"
                     /locus_tag="JN001_002543"
     CDS             15283..>16537
                     /gene="ligB"
                     /locus_tag="JN001_002543"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418104.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigB"
                     /protein_id="HAY9053735.1"
                     /translation="MKVWMAILISILCWQSSVWAVCPAWSPARAQEEIFRQQQQIKQW
                     DDDYWKEGKSEVEDGVYDQLSARLTQWQRCFVSEPRDVMMPPLNGAVMHPVAHTGVRK
                     MADKNALSLWMRERSDLWVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSL
                     ISAVPQTVSGPLANSTLQGEIFLQREGHIQQQMGGINARAKVAGLMMRQDDSDTLNSL
                     GVFVWAWPDGPQLMSDRLKELATAGFTLTQTYTRAVKNADEVARVRNEWWKAELPFVT
                     DGVVVRAAKEPESRHWLPGQAEWLVAWKYQPVAQVAEVKAIQFAVGKSGKISVVASLA
                     SVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWRGAERTKPTP
                     PENRFNSLTCYFASDVCQEQFISRLV"
BASE COUNT         3754 a         4228 c         4495 g         4060 t
ORIGIN      
        1 agtcgtataa aaaagggtgt tatggagcgt gtaaaacaac atcttcacct taatggcgat
       61 acagttggct gagagccagc agggggcaaa tcacctgcaa ataaacacgg cacatgctgg
      121 cgcgcatatc gcggatgcgt tcgaggacag aagaaccgac aggcggattc ttcagccgct
      181 catcgtccat cacaaaacct tagaccaggt attcctgaag ccgattgaat attgagcagt
      241 agaaaatatc tggattgaca gtattacaag gggttggaga acgtcagaag aggcattttg
      301 gcggaagatc acaggagtcg aacctgtccg ggaccgctgg cggccccaac tggatttgaa
      361 gtccagccgc ctcaccggag acgacgatct tccgcgcctc gattgctaca tggaggcggg
      421 gcgcattata gctacttcct tgagtttcta catcccccag atcagttttt tccgcctaat
      481 acacgcagcg tattatcacg aaagcattat agttcatata aaacccatat tttacaatga
      541 catatgagcg gaattaacgc taccacgatc acataaaaca agaatcataa attaataacc
      601 agatatcgga atattcgctc tcacagggat ggtttacaaa atgcgttatc ggtctcagca
      661 cccctatagc atcaaggaaa agcagatgaa gagtgaagtg ttgtccgtta aagagaaaat
      721 tggttatggc atgggagacg ccgccagcca cattattttc gataacgtaa tgttatatat
      781 gatgttcttt tataccgata tttttggcat tcctgccggt tttgtcggaa ccatgttttt
      841 ggtcgctcgt gcactggatg cgatttccga tccttgcatg gggttgttgg ccgatcgaac
      901 gcgctctcgc tggggtaaat ttcgtccgtg ggtactgttt ggcgcactgc cattcgggat
      961 cgtctgtgta ctggcctata gcacgccaga tctcagtatg aacggcaaaa tgatctatgc
     1021 agcaattact tacaccctac ttaccttact ttataccgtc gtcaatatcc cttactgcgc
     1081 attgggtggt gtaatcacca atgacccgac tcagcgtatc tcgctgcaat cctggcgttt
     1141 tgtgctggcg accgcgggag gcatgctttc tactgttctg atgatgccac tggttaattt
     1201 aattggcggt gataataaac cactcggttt ccagggcggt atcgcggtcc tttccgtggt
     1261 ggcattcatg atgctggcat tttgtttctt caccactaaa gaacgcgttg aagcaccacc
     1321 tacaacaacg tctatgcggg aagatttacg tgatatctgg caaaacgacc agtggcggat
     1381 tgtcggttta ctaaccattt tcaatatcct ggcggtgtgc gtactcggtg gggcgatgat
     1441 gtattacgtc acatggattt tgggcacgcc ggaagtgttt gtcgcttttc tcaccactta
     1501 ttgcgtgggt aacctgattg gttccgcact ggcaaaacct ctgaccgact ggaaatgtaa
     1561 agtcactatc ttctggtgga cgaacgccct gctggcagtg attagcctcg cgatgttctt
     1621 tgttcccatg caggccagca tcactatgtt tgtcttcatc ttcgtgattg gtgtgttgca
     1681 tcaactggtg acacctatcc agtgggtaat gatgtccgat accgtcgact acggcgagtg
     1741 gtgcaatggt aaacgcctga ccgggatcag ttttgctggc acgctgtttg tgctcaaact
     1801 ggggttggcc ttcggcggcg ctcttatcgg ctggatgctg gcttatggcg gatatgatgc
     1861 ggcagaaaaa gcgcagaaca gcgccacgat tagcatcatt attgcgctat tcacgattgt
     1921 tccggcgatc tgttatttgc tgagcgcgat tatcgctaaa cgctactact cactcacgac
     1981 gcacaatctg aaaaccgtta tggaacagct ggctcagggt aaacgccgtt gccagcaaca
     2041 attcacctct caagaagtgc agaactaagg aacggcaatg aaaattagcg atggaaactg
     2101 gttgattcaa cctggcctca atttgattca cccgcttcag gtgttcgagg ttgaacagca
     2161 ggataatgaa atggtggtct atgctgcccc ccgtgatgtg cgtgaacgta cctggcagct
     2221 tgatacgcct ttatttacgc tgcgcttttt ctccccacag gaaggtattg tcggtgtgcg
     2281 gattgagcat tttcagggag cgctgaataa cggtcctcat tatccgctca atattttgca
     2341 ggacgtgaag gtcacaatcg aaaacacaga acgttatgct gagtttaaaa gtggcaactt
     2401 aagcgcgcgt gtcagcaaag gtgagttctg gtcactcgat tttctgcgca acggtgaacg
     2461 tattaccggt caggacacga ataatcaacg aaattatatg tttgagcggc ttgatcttgg
     2521 cgttggcgaa acagtttatg gtctgggaga gcgttttact gccctggtgc gcaatggtca
     2581 gacggtagag acctggaacc gggacggcgg cacaagtact gaacaggcgt ataaaaatat
     2641 cccgttctat atgactaacc gtggctatgg ggtgctggtc aatcaccccc agagtgtctc
     2701 ttttgaagtg ggatcggaga aagtctccaa agtgcagttc agcgttgaga gcgaatatct
     2761 cgaatacttt gttatcgacg gtccgacgcc gaaagcggta cttgatcgtt atacccgttt
     2821 tactggtcgt ccggcgctgc cgcccgcatg gtccttcggc ctgtggctaa ccacttcatt
     2881 taccaccaac tacgacgaag cgacggtaaa cagctttatc gatggtatgg cggaacgcaa
     2941 tctgccgctg catgttttcc actttgactg tttctggatg aaagccttcc agtggtgcga
     3001 ttttgagtgg gacccgctga ctttcccgga cccggaaggg atgatccgcc gcctgaaagc
     3061 gaaagggctg aaaatctgcg tctggattaa cccctatatc ggtcaaaaat cccccgtctt
     3121 taaagagtta caagagaaag gctatttact caaacgcccg gacggttcgc tatggcagtg
     3181 ggataaatgg cagccaggtc tggcgattta tgactttacc aatccggatg cctgcaaatg
     3241 gtacgccgac aaactgaaag gtctggtcgc gatgggcgtt gattgcttta agaccgactt
     3301 tggcgaacgt atcccaactg atgttcagtg gtttgacggt tccgatccgc agaaaatgca
     3361 taaccattat gcgcacatct acaacgaact ggtgtggaac gtgctcaagg acaccgttgg
     3421 tgaggaagaa gctgtcttgt ttgcccgctc ggcctccgtc ggtgcgcaga aattcccggt
     3481 acactggggt ggcgattgtt acgctaacta cgaatcaatg gcggaaagcc tgcgcggtgg
     3541 tttgtctatt ggcctttcag gttttggctt ctggagccac tatatcggcg gctttgaaaa
     3601 taccgctccg gcgcacgttt acaaatgctg gtgcgcgttt ggtttgctct ccagccatag
     3661 ccgtttacac ggtagcaaat cttatcgtgt gccgtgggcc tacgatgatg agtcctgtga
     3721 tgtggtgcgc ttcttcacgc aactgaaatg ccgcatgatg ccgtatctgt atcgtgaagc
     3781 tgcgcgtgca aacgcgcggg gtacgccgat gatgcgggcc atgatgatgg agttcccgga
     3841 cgatccggct tgtgattacc ttgaccgtca atacatgtta ggcgacaacg tgatggttgc
     3901 gccggtgttc actgaagcgg gcgatgtgca gttctacctg ccggaaggtc gctggacaca
     3961 cctgtggcac aacgatgagc tcgacggtcg ttgctggcat aaacagcagc acagcttcct
     4021 gagtctgccc atttatgtgc gtgataacac cctactggcg ctgggcaaca acgatcaacg
     4081 tcccgattac gcgtggcacg aaggcacggc attccacctc tttaatctgc aagacgggca
     4141 tgaagccgtc tgtgaagtgc ccgctgctga cggatcggtg atctttactt taaaagcagc
     4201 acgtactggc aacacgatta ctgtgactgg tgcgggcgag gcgaagaact ggacactgtg
     4261 cctgcgcaat gttgtgaaag taaatggtct gcaagacggt tcgcaggctg aaagtgagca
     4321 ggggctggtg gtgaagcctc aagggaatgc gctgacaatt acgttgtaat ctattgatgg
     4381 aatgccgggt acgtctgagt cgtacccggc gagattgatg tttactgcac cagctctgcc
     4441 gacgtaactt caccgctgga aacgatgcca gcattcatgg tttgagtcac ttgctgcttt
     4501 gcggcgttca cggcatgcaa ttgcccgcta accgtaggtt tcagcggggc attggcctga
     4561 atatctccac tggcggtaag ctgaatattg ccgtcgccag tcaacggtaa ttcaggccat
     4621 ccccattgtt gcaaaatatt caccggcaca ccgcgtccat tcaggctgat atgggtctga
     4681 cgttgtggcg tttgtgaaac actggcagtg gcttccagaa tgcctttttc agtaaatgca
     4741 ctcagttcgc tgatattcac cgtgctgctg ttggcggtca gcgccagcga cgggcgacga
     4801 acatcaacac gattgaatgt cgcggcggcg gcattcagat tcgccgagcc actccagacg
     4861 ccccatttat gatcggtaac cagcgtcagg ttggcaccgt aaccatcgag cgtggtgagc
     4921 tgccacggga agtcagggtc gatatcaatg atcagattgc ggctggcgct aaatctcttc
     4981 agttgcaggc tgtttaacca accgggtgtc gtttccatcc acaactgttg ccagtttttc
     5041 ggcaaggtat attccagccc ggcaattgcc gcatcatcaa ggatcaacgt tttcccgtca
     5101 cgcagccagt tccctgacgt tctgaccata cccccttccc agcggctggt gaactggcgc
     5161 agcgctacgc cctgcgggga aaattccgcg tttataatcg ggtcaaataa atgcagcgaa
     5221 ccataaatga actcgctagc gttcatcaac agtttgcctt cttgtgtctg ccagtcatct
     5281 ttactgaagg tcatgttgcg caagctgaga tcgaggtcgg tcaccgccca gtccggacct
     5341 tgcaaatgag catcgatcac ttccaggcga ccaatctgca acgacgggac agagcgtaat
     5401 ggcgcaaaga agtcggttag cgatttttcg ctttgtagac gtatatccgc catgcgcagg
     5461 ttttccactt gccagctgcc gtcggcgtta cgctgcgcgt ttccggttaa tgtcccgcgg
     5521 gcgatgtcgg cacccaggtt agtcagcgta acgcgatcgt tatcaatact gccttcaatc
     5581 agtacattgg tggcaggaac atcattgagc gaaagcgatc cggcactaaa ctgaatctgc
     5641 gccttcgtac ccagcacttt accggctttt ggtgaccacg gaactacgcc gccatttacc
     5701 cgctgcgcgc tcagtttcca ttcgctattc gggctattaa acgccatatc acgcagttgc
     5761 agacgatcgg ctttgaacgg tagcggcgcg gtctggtcgg tgagattcag cgtcccgttt
     5821 tccagcagga tggtatcgac atggcgtggt tcggtcagtt gccgactgct tagcgcaatg
     5881 tcgacacttt tggccaccag ggtcgcgggc tgaccatcac gaccaaacgt gacattctcc
     5941 agcacgatat gagatggcgc ggaaaaacgg tgatccatcg ccccgaaggc cagatgatag
     6001 tcgctattct cggaaaccca tgcgctgata tgttctgctc cccagcgggt ttgcagaaga
     6061 aaatagaggc cagcgatcac cactaacaga gcgatgagaa tgtagagaag cagcttccca
     6121 ataaatttca tggtcttcca ttccgtgaaa tgcacataag agagttatgc acgatttacg
     6181 cgcaatcctc aaggcgggaa tggtgaaaga ggtgagactg cggcggtaat tatcttaccg
     6241 ccgccagtga attactgttt ttctggtggg aaaatcagat tcagcacgat ggcagtaata
     6301 ccgcccgcgg cgatcccgga ggagagcagg tttttcagcc attcaggggc aaactgcaaa
     6361 atcagcggct gctgagacac gcccagacca accgccagcg acagcgcgat aatcagaatc
     6421 gcccgacggt tcagcggctc acgagaaacg atacgcacac cggaggcggc gatggtgcca
     6481 aacattacaa gcgttgcgcc gcccagaacc ggttctggaa tgtgttgtac aaaaccgctc
     6541 actgccggga acagacccag cacgatcaac atcagcgcga cgacaaaacc gacatagcgg
     6601 ctggcaacac cagtcaactg gatcactccg ttgttttgcc cgaagcagga gttcgggaag
     6661 gtgttaaaca ccgccgaaac aaacgagttc aggccgtttg ccagcacgcc gcctttcagg
     6721 cgtttcatgt acagcggacc ggacactggc tgttcggaaa cgtcagaggt cgacgtgata
     6781 tcgccaatgg tttccagcga agtgatcata aagaccagca tcagcggcag cagcagactc
     6841 cattcaatgc caagaccgta atagagcggc gttggcacca taatcagttc ttgcgtcatc
     6901 ggttcgttgc tttctggcaa catgcccata aaccacgcca gcgcatatcc ggccgccatc
     6961 gcaatcacca gtgaggccac gcgtaagtaa gggttacgtt gacggttaag caggataatt
     7021 aaggctaaga ccacgcctgc cagcagcaga tttttcggtg cgccgaaggt gttatcgctc
     7081 atggctgcgt aaccgccgcc aatggacgtt aacccaacct gaattagcga caggccgata
     7141 atcatcacca caacgccaga aaccagcggc gtaataatgc ggcgcgccag atgcagaacg
     7201 cgggagatca ccatctcggt gcaacttgcc agcatcaacg tgccgaacaa agccgccatc
     7261 atggtaggaa catcagcacc accggttttc agcgcggtac cgcccataat cagcggggca
     7321 acaaagttga agctggtgcc ctgaatagac aacagcccgg agccaaccgg accccaggtc
     7381 ttaatttgaa taatcgatgc cacaccggag gcaaacagcg acatactaat aatgtgttgc
     7441 gtgtcttgtg ccggtaaacc cagcgcctgg cagattaata gcgctggcgt gatcaccgca
     7501 acgaacatcg ccagcagatg ctgacaggcg gcaaacaggg tttgaggaag cggcggacga
     7561 tcttcaagac ggtaaatcag ttcgctgttt tgagtctgcg caaccggttg cgcattttct
     7621 gactcgaggg tggaaacaga catcgaaaac aatcccgtgg tagcaaagcg ggcattttag
     7681 ctgaccgaaa gagaaaagca aacgtttgcc acatcctcat ctaaatattt aaatgagata
     7741 aatgcacttt tttatataac ttttggtatt tttctgctta aaatccatgc catttgttca
     7801 ttaacagctg agaatttgac ccaggaaagc ataactcgat acccgtcata gttcatgaag
     7861 ttgccactgc gcgatgaagt atgacgagta tgaaagagtg atgcggatac aaaggagtaa
     7921 ctatgtttca tctcgatact ttagcaacgc ttgttgccgc aacgctgacg ttgctgctcg
     7981 ggcgtaagtt ggtccattcc gtctcctttt tgaagaaata caccataccg gaacctgttg
     8041 cgggtggttt gttggtggcg ctggcgctac tagtactgaa aaaaagcatg ggctgggaag
     8101 tcaactttga tatgtccctg cgcgatccgt taatgctggc tttcttcgcc accattggcc
     8161 tgaacgccaa cattgccagt ttgcgtgccg gtgggcgtgt ggttggcatc ttcttgattg
     8221 tggttgttgg tctgttggtg atgcaaaatg ccattggcat tggtatggct agcctgttag
     8281 ggcttgatcc gctgatgggg ctgttggccg gttctattac gctttccggc ggtcacggta
     8341 cgggcgctgc gtggagtaaa ttgttcattg aacgttatgg cttcaccaat gcgacggaag
     8401 tggcgatggc ctgtgcaacg ttcggtctgg tgctgggcgg cttgattggc ggtccggtgg
     8461 cgcgctatct ggtgaaacac tccaccacgc cgaacggtat tccggatgac caggaagtcc
     8521 cgacggcgtt tgaaaagccg gatgtgggac gcatgatcac ctcgttggtg ctgattgaaa
     8581 ctatcgcgct gattgctatc tgcctgacgg tggggaaaat tgttgcgcaa cttttggctg
     8641 gcactgcttt tgaactgccg accttcgtct gtgtactgtt tgttggcgtg attctgagca
     8701 acggtctgtc aataatgggc ttttaccgcg tctttgagcg tgcggtatcc gtgctgggta
     8761 acgtaagctt gtcgttgttc ctggcgatgg cgttgatggg gctgaaactg tgggagctgg
     8821 cttcgctggc gctgccgatg ctggcgattc tggtggtaca gaccatcttc atggcgttgt
     8881 atgccatctt cgttacctgg cgcatgatgg gcaaaaacta cgatgcggca gtgctggctg
     8941 cgggtcactg tggttttggc ctcggtgcaa cgccaacggc aatcgccaac atgcaggcga
     9001 tcactgaacg ctttggcccg tcgcacatgg cgtttttggt ggtgccgatg gtcggtgcgt
     9061 tctttatcga tatcgtcaat gcgctggtaa ttaagttgta tttgatgttg ccgatttttg
     9121 ccggttaacc gatgaagcgg cggtcttctc accgccgcct tttacgcatt cgagtaacgt
     9181 tctgtctccg gcatccagcg ttctatcaag gcttttgcct gttgtgggta acgttcgtga
     9241 atatgtcgcg ccaggcgctg aacttccggg atcatcgcct gatcgcgcag taaatccgcc
     9301 actttaaatt cagcattacc cgtctgacgc gtgcctaaca attcgccagg gccgcgaatc
     9361 tccagatctt tttgcgcaat cacaaaaccg tcgttactgt cgcgcagcac ttgcaggcga
     9421 atttgcgccg ttttagaaag cggcgttttg tagagcagca cgcagtgaga agccaccgcg
     9481 ccacgaccta cgcgcccgcg cagctggtgt aactgcgcca gacccagacg ctcagggttt
     9541 tcgataatca tcaggctggc gttaggcaca tcaacaccga cttcaataac ggtagtggca
     9601 accagcagat gtagctcacc ttgtttaaac gacgccatca ccgcctgttt ctcggctggt
     9661 ttcatccgcc cgtgtaccag gccaacattc aattctggta gcgccagttt caactcttcc
     9721 caggtagctt ccgccgcctg cgcttccagt aactctgact cttcaatcaa cgtacaaacc
     9781 cagtacgcct gacgaccttc agttatgcag gcatggcgca cgcggtcaat gatgtcggta
     9841 cggcgggtat caggaatagc gaccgtagtc actggcgtgc ggcctggcgg cagctcatct
     9901 atcaccgagg tatcgagatc ggcatacgcc gtcattgcca gcgtgcgggg gatcggcgtg
     9961 gcggtcatga tcaactgatg cggatggaag ccttgctgct ggcctttctc ccataacgcc
    10021 agacgctgat gcacgccaaa gcgatgttgt tcgtcgataa tcaccagcgc cagaccgtta
    10081 aactgcacct gttcctggaa gatggcgtgc gtaccaacaa tcatctgcac ctgaccgctg
    10141 gcgatggctt cctgctgaga cagtcgcgct ttgcctttct gcttaccggc gagccagccc
    10201 acttcgatac cgagcggttc aaaccagttg cggaagttat tggcgtgctg ttcggcgagt
    10261 aattcggttg gtgccatcaa tgccacctgt ttgccgtggg caatcgcacg cagcgcggcg
    10321 agggcggcga ccagcgtttt accggaacct acatcgccct gtaccaggcg catcatcggc
    10381 acatccagcg ccatatcgcg ctcgatctcc gccactacgc gtgcctgtgc gcccgttggc
    10441 ttgaacggta aggctgcgag gagtttattt ttcagcgcat cattggcgct cagcggctgg
    10501 gcatgaaaac gctgtgctcc ggcacgtaag gctaacatgc tgaggttgtg cgccagcagt
    10561 tcttccagaa tcagacgacg ttgcgccgga tgctgcccgg tttccagatc gctaagctgt
    10621 agcgtcggtg gcgggcggtg caaagtgcgc aacgcttccg gtagcgtcat cattccttgt
    10681 gacagttccg gcggcaggag ttcttcaatg gcgcaggtgt cgagcagatc cagcgcctgg
    10741 tcggttaatt tacgcagcgt ggcctgcttt acgccttccg ttgttggata aaccggcgtg
    10801 agcgtttcct gtaattctgg cgtgctgaga tcgccctgca cgcggtattc cgggtggatc
    10861 atctccgcac catatttacc gcgctttgct tcgccataag ccagtacacg gcggcccgtc
    10921 gccaggctat ttttcattgc cgcgctgaaa ttgaaaaagc gcatggtgag gatgccggaa
    10981 ccgtcgctga tctggcaggt catcatccgc cgaccgccga aggagatatt gcagttcagc
    11041 acttcgcctt ccaccgtggc ataaacgccc ggcagtagtt ctccgatggg gtagagatgg
    11101 gtgcgatctt cgtagcgcag gggaaggtgt aagagtagat cctgcacggt atgcaggttg
    11161 attttcgcca gtttgttact aagtgctgcg ccaacgcccg ttagggaact gagtgggaca
    11221 gcatctaaca ggcgacctgt catggcactt accctgcagc ctgcatagta gcccaccagt
    11281 cggcatcagc ttcgatctcg ccttgctgat tgacgtgggg ataaggcagg cctttgcgtt
    11341 ttgcgacttt cgccagcacc ggatagccgc cttcaaacaa caggcgttgt tgctctgctt
    11401 ccggcaacat gctgttttca cgcaggtaca tgcctgcatt ttgccgctga cgctgggctt
    11461 cgtaaagaat gagggctgag gcaacggaaa cattcagcga ctgcaccatg ccgatcatcg
    11521 gaatgatgat gtcctgatcc gccagggcca atgcttcctg cgtgatgccc gttttctcct
    11581 gtcccatcaa aatgcaggtc gggcgagtgt aatcaatttc gcggaaatcg acagcgttat
    11641 cagaaagatg ggttgccaga atctgcatgc cctggccttt gagatgagcg acggcatcgc
    11701 caatggtgcg gtgtgttttc acctgtaccc agctgttact acccgccgct gccgaagcca
    11761 tggtgcgcat gcggctacca ggccagacgg cgtgaacttc atgtacgcca acggcatctg
    11821 cggtacgaat aatcgcagaa acgttatgag gtttgtggac ctgctccatg cagacggtca
    11881 gatcaggctg ccgcctggcg agcatttcgc agatgcgtgc ataacgtgtt gggttcataa
    11941 aacattaatt tcggtttcgg gtgactttaa tcacgtctgg catcacgcgg attttgcgca
    12001 tgatattcgc cagatgcaca cggtcacgag cggtcagacg aataaaggcg ctgtagacgc
    12061 gaccatcttt ctcttccgta ttcaaacttt gaatattcga agtcgtggtg ttaattgccg
    12121 ccgtcaggtt tgccagcgca ccctgatgat tgaacatctc caccttgatt tcggtgatga
    12181 actcctgcgc cgtctcttta tcccattcca cagccataaa cttctctggc tctttctggt
    12241 agccacggat gttacggcag gattcatggt ggatcaccag acctttaccg gggctgacgt
    12301 gggcgataat cgggtcgcca ggaatagggc ggcagcattt cgcaaaggtg atcagcacgc
    12361 catccgcgcc tttgatcggc agatgcccgt ggctttgagt cgccggtgga atggaggcgt
    12421 ccccatgttg tagatttttc gcgaccacca cgctcattgc gttaccaagg ccgatttctg
    12481 ccagcagatc gtcaagcgtt gccagcttca tgcgatccag ctcgcgctga atattttcct
    12541 gcgggatttc attgagctta cggctaccac ccaaagcatg gttgagcaga cgacggccca
    12601 ggcttacaga atcatcacgc ttgaggtttt tcagcaactg acgaattttg gcgcgcgctt
    12661 tcgagctaac gacaaagttc agccaagcgg cattcgggcg agcgcccgga gcggtaatga
    12721 tttcaacggt ctgaccgcta gtaagcggct gcgacagcgg gtaaggctgg cggtcgacgc
    12781 gtgcgcccac gcaggcatgg ccgatatcgg tatgcactgc ataagcgaag tcgacgggcg
    12841 ttgcaccggc aggcagctcg acaatgcgcc cttccggtgt gaaaacgtaa atctcatccg
    12901 ggaagagatc ggatttaacg ctctcgataa attcaaacga actaccggcg ctctgttgca
    12961 gctccagcag gctttgcatc cagcgctggg cgcgtatttg tgcggtagta ctggtttcgc
    13021 cgtgctcttt ataagcccag tgcgcggcaa cacccatctc cgccatctga tccatatctt
    13081 cggtacggat ctggacctca accggcacgc cgtgcgggcc aatcatcgag gtgtgcaacg
    13141 actgatagcc gttcgctttt ggaatggcga tatagtcttt cacgcggccc ggacgcggct
    13201 tgtacaggct gtgcatctgg cccagcacgc gataacaggt gtcagaatca ttgacgatca
    13261 cgcggaaagc gtagatgtcc atgattgagt gaaaacgctg ctctttgagc accattttgc
    13321 agtaaatcga ataaagatgc ttttcgcgac cactgacgcg gcacggtatt cccgcttcct
    13381 gcaaacgccc ttcgatttca gaaagaatct tctggatcat ctctttacgg ttgccgcgcg
    13441 cggctttcac cacttctttg attacgcgat aacggttggg atacagcgcc tcaaaaccca
    13501 gctcttcgag ttcggtttta atgtggtgga tacctaaacg gtgcgccagc gggctgtaaa
    13561 tttcgagagt ttcacgggcg atgcggcgac gtttgtccgg gcgaagtgag cccagcgtgc
    13621 gcatgttgtg ggtacggtcg gcaagtttga tgaggatgac gcggatatcc tgcaccatcg
    13681 ccataatcat cttgcgaaag ttttcggcct gcgcctcttt cttatcgcgg aacttgagtt
    13741 tatcaagttt cgacaccccc tctaccagct cggcgacgct tttaccaaaa agctgttcca
    13801 tatcctggta ggtggcggga gtatcttcaa tcacgtcatg cagcagcgcc gccatcagcg
    13861 tttcatagtc gagtttcatc tcggccagaa tgcaggcaac cgctaccggg tgcgtgatat
    13921 agggttcacc gcttgaacgt gtttgcccct cgtgagcatc acgtgcaacg agatacgcct
    13981 gccgcagacg cttgatttgg tcttccggca ggtaggtttg aatcagttga ttcaggcttt
    14041 caaacagata caagggcgac ccgctttgtg attaacgacg accttcagca atagcggtaa
    14101 cggcttgtaa ttcagcggct tcctgctctt gctgttcctg gcgttcgcga acgtcgagga
    14161 tctggttgtt gatcagacct tcttcgattt cgcgcagcgc gattacagtg gttttatcgt
    14221 tttcttccgg taccagcgga tcctttccgc ctacctgcat ctgacgagcg cgacgcgcgg
    14281 cgaccagtac caggtcaaaa cggttaccaa ttttctctac agcgtcctga acagttacgc
    14341 gtgccatact taaaaagctc cacaggtgaa gaaatgactg ggcatgatac tgaaatcagg
    14401 ttcagtctgc caacaatttg ctgattaaag cgtcatgacg ctgcttttgg cggctcatgc
    14461 gcagacgttc ggcgcgaata atggtcttca aatcggtcaa cgcggtatcg aagtcatcat
    14521 tcacaatcag gtaatcatat tcgtcgtaat ggctcatttc tgcaacagct tgcgccatac
    14581 gctttgcaat gacctcttcg ctgtcctgac cgcgaccgcg tagacggcgg tccagttcaa
    14641 ttttagacgg cggtaaaata aagatactcc gcgcgtgcgg catcttctgg cgaatttgct
    14701 gcgcgccctg ccagtcgata tcgagaaaaa catcgacacc ggtcgccagt acttgctcaa
    14761 tggcctcacg cgaagtgcca tagtaattac caaaaacttc tgcgtgttcg aggaacgcat
    14821 ctctgctaat catttcttta aattcatcat gattaacaaa gaaataatgt tcaccgtgga
    14881 cttcaccagg acgcggttgg cgtgtggtgt gtgaaacaga aacctgggtg tcatacaacg
    14941 gttgggtttt taataaagcc tgaatcaggc tggatttacc cgcgccactg ggggcagaaa
    15001 caatataaag cgtgccttga gccatgagta tctttcgtat gtgattagcg aaataaagcc
    15061 tacatacgag cttattatac acggcgcggc catgtgacgt agcccttgct cacacttttt
    15121 gcgcaaagtt gttgcgtttt gcgtagctgc ttccgcattt gcctgtgatt tactgcaata
    15181 aagacgattc tcaggaagcg tcctcgcaga ctccgttttt gccactcggc tttgccttca
    15241 ccacgttgta tatctgccag cctgactaca gcggaggtga agatgaaagt atggatggcg
    15301 atattaataa gtatcttgtg ctggcaatca tctgtgtggg cggtctgtcc ggcctggtcg
    15361 ccagccagag cacaggaaga aattttccgc cagcaacagc aaataaaaca gtgggacgat
    15421 gactactgga aggaaggaaa aagtgaggtg gaagacggtg tttacgatca gttaagcgcc
    15481 cgtcttacgc agtggcaacg ctgctttgtg agcgagcccc gcgacgtgat gatgccgcct
    15541 ttaaatggtg cggttatgca tccggttgcc catacgggtg tacgcaaaat ggcggataaa
    15601 aacgcattaa gtctgtggat gcgagaacgt agcgatcttt gggtgcagcc aaaagttgat
    15661 ggcgttgcgg taaccctggt ttatcgggac gggaaactga acaaagcaat cagtcgcggt
    15721 aatggcctga aaggcgagga ctggacgcag aaagttagct taatttccgc tgtgccgcaa
    15781 accgttagcg ggcctttagc caacagtacg cttcaggggg aaatatttct ccagcgcgag
    15841 gggcatatcc aacaacaaat ggggggaata aatgcccgcg caaaagttgc tggcttgatg
    15901 atgcgccagg acgatagcga cacgctgaat tctctgggcg tttttgtctg ggcatggccg
    15961 gatggaccgc agttaatgtc tgatcgttta aaagagctgg ctaccgcagg ttttactcta
    16021 acgcagacgt atacccgtgc ggtgaaaaat gctgatgaag ttgcgcgcgt acgcaatgag
    16081 tggtggaaag cggaattacc cttcgtcacc gatggcgtag ttgtacgagc ggcgaaagag
    16141 ccagaatccc gccattggct accgggccag gcagagtggc tggtggcctg gaaatatcaa
    16201 cctgtagctc aggttgccga agtgaaggcg attcagtttg cggtgggtaa gagcggtaaa
    16261 atatcggtgg ttgcgtcact cgcatctgtc atgctggatg ataaaaaagt ccagcgggtg
    16321 aatattggtt ccgtcaggcg ctggcaggag tgggatattg cgcctggtga tcagattctc
    16381 gtcagccttg ccggtcaggg tattcctcgc attgatgatg tggtgtggcg cggtgcagaa
    16441 cgtacaaaac cgacaccgcc agaaaaccgc tttaactcgt tgacctgcta ctttgcttct
    16501 gatgtttgtc aggaacagtt catttcacgc ttagtct
//
LOCUS       DADMJE010000089        16521 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.090, whole genome shotgun sequence.
ACCESSION   DADMJE010000089 DADMJE010000000
VERSION     DADMJE010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16521
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.090"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            93..2321
                     /gene="crfC"
                     /locus_tag="JN001_002544"
     CDS             93..2321
                     /gene="crfC"
                     /locus_tag="JN001_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="clamp-binding protein CrfC"
                     /protein_id="HAY9053736.1"
                     /translation="MYTQTLYELSQEAERLLQLSRQQLQLLEKMPLSVPGDDAAQLAL
                     PWSQPNIAERYAMLNNELRKISRLEMVLAIVGTMKAGKSTTINAIVGTEVLPNRNRPM
                     TALPTLIRHTPGQKEPVLHFSHVAPIDCLIQQLQQRLRDCDIKHLTDVLEIDKDMRAL
                     MQRIENGVAFEKYYLGAQPIFHCLKSLNDLVRLAKALDVDFPFSAYAAIEHIPVIEVE
                     FVHLAGLESYPGQLTLLDTPGPNEAGQPHLQKMLNQQLARASAVLAVLDYTQLKSISD
                     EEVREAILAVGQSVPLYVLVNKFDQQDRNSDDADQVRALISGTLMKGCITPQQIFPVS
                     SMWGYLANRARYELANNGKLPAPEQQRWVEDFAHAALGRRWRHADLADLEHIRHAADQ
                     LWEDSLFAQPIQALLHAAYANASLYALRSAAHKLLNYAQQAREYLDFRAHGLNVACEQ
                     LRQNIHQVEESLQLLQLNQAQVSGEIKHEIELALTSANHFLRQQQDALNAQLAALFQD
                     DSEPLSEIRTCCETLLQTAQNTISRDFTLRFAELESTLCRVLTDVIRPIEQQVKMELS
                     ESGFRPGFHFPVFHGVVPHVNTRQLFSEVISRQEATDEQSTRLGVVRETFSRWLNQPD
                     WGRGNEKSPTETVDYSVLQRALSAEVDLYCQQMAKVLAEQVDESVTAGMNTFFAEFAS
                     CLTELQTRLRESLALRQQNESVVRLMQQQLQQTVMTHGWIYTDAQLLRDDIQTLFTAE
                     RY"
     gene            2318..3201
                     /locus_tag="JN001_002545"
                     /pseudo
     CDS             2318..3201
                     /locus_tag="JN001_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418534.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3465..4967
                     /gene="proP"
                     /locus_tag="JN001_002546"
     CDS             3465..4967
                     /gene="proP"
                     /locus_tag="JN001_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709830.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline transporter ProP"
                     /protein_id="HAY9053737.1"
                     /translation="MLKRKKVKPITLRDVTIINDSKLRKAITAASLGNAMEWFDFGVY
                     GFVAYALGKVFFPGADPSVQMVAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAIT
                     IVIMSISTFCIGLIPSYDTIGIWAPILLLICKMAQGFSVGGEYTGASIFVAEYSPDRK
                     RGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLR
                     HALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKYWRSLLTCIGLVIATNVTYY
                     MLLTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVLLGSVA
                     LFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAA
                     FNISVLVAGLTPTLAAWLVESSQNLMMPAYYLMVVAVIGLITGVTMKETANRPLKGAT
                     PAASDIQEAKEILVEHYDNIEQKIDNIDHEIADLQAKRTRLVQQHPRIDE"
     gene            5033..5170
                     /gene="pmrR"
                     /locus_tag="JN001_002547"
     CDS             5033..5170
                     /gene="pmrR"
                     /locus_tag="JN001_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000797656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxT activity modulator PmrR"
                     /protein_id="HAY9053738.1"
                     /translation="MSDAHTLLQVNGGECNEKPCLYESLTTVFSVLVVSSFLYIWFAT
                     F"
     gene            complement(5188..6246)
                     /gene="pmrB"
                     /locus_tag="JN001_002548"
     CDS             complement(5188..6246)
                     /gene="pmrB"
                     /locus_tag="JN001_002548"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PmrB"
                     /protein_id="HAY9053739.1"
                     /translation="MNLMRFLRRPISLRQRLILTIGAILLVFELISVFWLWHESTEQI
                     QLFEQALRDNRNNDRHIMREIREAVASLIVPGVFMVSLTLFICYQAVRRITRPLAELQ
                     KELEARTADNLTPIAIHSATLEIEAVVSALNDLVSRLTSTLDNERLFTADVAHELRTP
                     LAGVRLHLELLAKTHHIDVAPLVARLDQMMESVSQLLQLARAGQSFSSGNYQHVKLLE
                     DVILPSYDELSTMLDQRQQTLLLPESAADITVQGDATLLRMLLRNLVENAHRYSPQGS
                     NIMIKLQEDGGAVMAVEDEGPGIDESKCGELSKAFVRMDSRYGGIGLGLSIVSRITQL
                     HHGQFFLQNRQETSGTRA"
     gene            complement(6247..6915)
                     /gene="basR"
                     /locus_tag="JN001_002549"
     CDS             complement(6247..6915)
                     /gene="basR"
                     /locus_tag="JN001_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BasR"
                     /protein_id="HAY9053740.1"
                     /translation="MKILIVEDDTLLLQGLILAAQTEGYACDGVTTARMAEQSLEAGH
                     YSLVVLDLGLPDEDGLHFLARIRQKKYTLPVLILTARDTLTDKIAGLDVGADDYLVKP
                     FALEELHARIRALLRRHNNQGESELIVGNLTLNMGRRQVWMGGEELILTPKEYALLSR
                     LMLKAGSPVHREILYNDIYNWDNEPSTNTLEVHIHNLRDKVGKSRIRTVRGFGYMLVA
                     NEEN"
     gene            complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="JN001_002550"
     CDS             complement(6912..8555)
                     /gene="eptA"
                     /locus_tag="JN001_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418538.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoethanolamine transferase EptA"
                     /protein_id="HAY9053741.1"
                     /translation="MLKRLLKRPSLNLLAWLLLAAFYISICLNIAFFKQVLQALPLDS
                     LHNVLVFLSMPVVAFSVINIVLTLSSFLWLNRPLACLFILVGAAAQYFIMTYGIVIDR
                     SMIANIIDTTPAESYALMTPQMLLTLGFSGVLAALIACWIKIKPATSRLRSVLFRGAN
                     ILVSVLLILLVAALFYKDYASLFRNNKELVKSLSPSNSIVASWSWYSHQRLANLPLVR
                     IGEDAHRNPLMQNEKRKNLTILIVGETSRAENFSLNGYPRETNPRLAKDNVVYFPNTV
                     SCGTATAVSVPCMFSDMPREHYKEELAQHQEGVLDIIQRAGINVLWNDNDGGCKGACD
                     RVPHQNVTALNLPGQCINGECYDEVLFHGLEEYINNLQGDGVIVLHTIGSHGPTYYNR
                     YPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSL
                     VYLSDHGESLGENGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQ
                     TQHYSQDNLFSTLLGLTGVETKYYQAADDILQTCRRVSK"
     gene            complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="JN001_002551"
     CDS             complement(8659..9996)
                     /gene="adiC"
                     /locus_tag="JN001_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine/agmatine antiporter"
                     /protein_id="HAY9053742.1"
                     /translation="MSSDADAHKVGLIPVTLMVSGNIMGSGVFLLPANLASTGGIAIY
                     GWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPFLGYQTNVLYWLACWIGNI
                     AMVVIGVGYLSYFFPILKDPLVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVLALI
                     PIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVK
                     NPKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNAALRVSASPFGDAARMALGDTPGA
                     IVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFARVNKAGTPVAGLIIVGILM
                     TIFQLSSISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKARPAYLAVTT
                     IAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDAPISKD"
     gene            complement(10133..10894)
                     /locus_tag="JN001_002552"
     CDS             complement(10133..10894)
                     /locus_tag="JN001_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY9053743.1"
                     /translation="MRICSDQPCIVLLTEKDVWIRVNGKEPISLKANHMALLNCENNI
                     IDVSSLNNTLVAHISHDIIKDYLRFLNKDLSQIPVWQRSATPILTLPCLTPDVFRVAA
                     QHSMMPAETESEKERTRALLFTVLSRFLDSKKFLSLMMYMLRNCVSDSVYQIIESDIH
                     KDWNLSMVASCLCLSPSLLKKKLKSENTSYSQIITTCRMRYAVNELMMDGKNISQVSQ
                     SCGYNSTSYFISVFKDFYGMTPLHYVSQHRERTVA"
     gene            complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="JN001_002553"
     CDS             complement(11219..13486)
                     /gene="adiA"
                     /locus_tag="JN001_002553"
                     /EC_number="4.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418541.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine decarboxylase"
                     /protein_id="HAY9053744.1"
                     /translation="MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDG
                     FAILSSNEAIDCLMFSYQMEHPDEHQNVRQLIGKLHERQQNVPVFLLGDREKALAAMD
                     RDLLELVDEFAWILEDTTDFIAGRAVAAMTRYRQQLLPPLFSALMKYSDIHEYSWAAP
                     GHQGGVGFTKTPAGRFYHDYYGENLFRTDMGIERTSLGSLLDHTGAFGESEKYAARVF
                     GADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR
                     NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTYDGVCYNAKEAQ
                     DLLEKTSDRLHFDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALS
                     QASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEV
                     IDEAVDFRQAMARLYKEFTADGSWFFKPWNKEVVTDPQTGKTYDFADAPTKLLTTVQD
                     YWVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWLGRH
                     GIVPTRTTDFQIMFLFSMGVTRGKWGTLVNTLCSFKRHYDANTPLAQVMPELVEQYPD
                     TYANMGIHDLGDTMFAWLKENNPGARLNEAYSGLPVAEITPREAYNAIVDNNVELVSI
                     ENLPGRIAANSVIPYPPGIPMLLSGENFGDKNSPQVSYLRSLQSWDHHFPGFEHETEG
                     TEIIDGIYHAMCVKA"
     gene            complement(13685..14593)
                     /gene="melR"
                     /locus_tag="JN001_002554"
     CDS             complement(13685..14593)
                     /gene="melR"
                     /locus_tag="JN001_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MelR"
                     /protein_id="HAY9053745.1"
                     /translation="MNTDTFMCSSDEKQTRSPLSLYSEYQRMEIEFRAPHIMPTSHWH
                     GQVEVNVPFDGDVEYLINNEKVNINQGHITLFWACTPHQLTDTGTCQSMAIFNLPMHL
                     FLSWPLDKDLINHVTHGMMIKSLATQQLSPFEVRRWQQELNSPNEQIRQLAIDEIGLM
                     LKRFSLSGWEPILVNKTSRTHKNSVSRHAQFYVSQMLGFIAENYDQALTINDVAEHVK
                     LNANYAMGIFQRVMQLTMKQYITAMRINHVRALLSDTDKSILDIALTAGFRSSSRFYS
                     TFGKYVGMSPQQYRKLSQQRRQTFPG"
     gene            14876..16231
                     /gene="melA"
                     /locus_tag="JN001_002555"
     CDS             14876..16231
                     /gene="melA"
                     /locus_tag="JN001_002555"
                     /EC_number="3.2.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-galactosidase"
                     /protein_id="HAY9053746.1"
                     /translation="MMTAPKITFIGAGSTIFVKNILGDVFHREALKTAHIALMDIDPT
                     RLEESHIVVRKLMDSAGASGKITCHTQQKEALQDADFVVVAFQIGGYEPCTVTDFEVC
                     KRHGLEQTIADTLGPGGIMRALRTIPHLWQICEDMTEVCPDATLLNYVNPMAMNTWAM
                     YARYPHIKQVGLCHSVQGTAEELARDLNIDPSTLRYRCAGINHMAFYLELERKTADGS
                     YVNLYPELLAAYEAGQAPKPHIHGNTRCQNIVRYEMFKKLGYFVTESSEHFAEYTPWF
                     IKPGREDLIERYKVPLDEYPKRCVEQLANWHKELEEYKNASRIDIKPSREYASTIMNA
                     IWTGESSVIYGNVRNDGLIDNLPQGCCVEVACLVDANGIQPTKVGTLPSHLAALMQTN
                     INVQTLLTEAILTENRDRVYHAAMMDPHTAAVLGIDEIYALVDDLIAAHGDWLPGWLH
                     R"
     gene            16334..>16521
                     /locus_tag="JN001_002556"
     CDS             16334..>16521
                     /locus_tag="JN001_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418544.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose:sodium transporter MelB"
                     /protein_id="HAY9053747.1"
                     /translation="MSISMTTKLSYGFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLV
                     GTLFLVARIWDAINDPIMG"
BASE COUNT         3986 a         4001 c         4350 g         4184 t
ORIGIN      
        1 tttcttgcag taattataaa agccgaaaac agaactcaaa aacaatctgg ctaaataaaa
       61 gtaacaaaat ttgctttaag gaagaatttt ctatgtacac acagaccctg tatgagttaa
      121 gtcaggaggc tgaacgcctg ttacagcttt ctcgccaaca gttgcagtta ctggaaaaaa
      181 tgcctctctc tgtacccgga gacgatgcgg cacaactggc tttaccctgg agtcagccta
      241 atatcgccga acgttacgcg atgctgaata atgagttgcg taaaatttcc cgactggaaa
      301 tggtgctggc gattgtcggt actatgaaag cagggaaatc aaccaccatt aatgccattg
      361 ttggtacgga ggttctgcct aatcgtaatc gcccaatgac tgcgctgccg acgcttattc
      421 gccatacgcc cgggcaaaag gaaccggtac tgcatttttc acatgtcgcg ccaatcgatt
      481 gtttaattca acaattacaa cagcgcctgc gtgattgcga tattaagcat ctgaccgatg
      541 tgctggaaat agataaagat atgcgtgcgc ttatgcagcg gatcgaaaat ggcgtcgctt
      601 tcgaaaaata ttatctgggt gcccagccta tttttcattg tctgaaaagt ttgaatgatt
      661 tagtgcgact ggcgaaggcg ctggacgtcg attttccttt ttctgcttac gccgccattg
      721 agcatattcc cgtgattgaa gtggagtttg tccatctggc ggggctggaa agttatcccg
      781 gtcagttgac gttactggat acccccgggc caaatgaagc cgggcaaccg catctgcaaa
      841 aaatgcttaa ccagcagctg gcacgcgcct cggcggtact ggcggtgctg gattatacgc
      901 aactgaaatc gatctccgat gaagaggtcc gtgaggcgat tttggcggtg gggcaatcgg
      961 tgccgctgta tgtgctggtc aataagttcg atcaacagga tcgtaacagt gacgacgccg
     1021 accaggtgcg ggcactgatt tccgggacgc tgatgaaagg ctgtattacg ccacagcaga
     1081 tatttccggt gtcgtcgatg tggggctacc tggcgaatcg ggcgcgctat gagttagcca
     1141 acaacggtaa gttaccagcg ccagagcaac aacgctgggt ggaagatttt gcccatgccg
     1201 cgctcggcag gcgctggcgt catgccgatc tggcggacct cgaacatatt cgtcatgctg
     1261 ccgatcagtt gtgggaagat tcgctgttcg cccagccaat tcaggcgttg cttcatgccg
     1321 cttacgctaa cgcctcattg tatgctctgc gatctgctgc gcataaactg ttgaattacg
     1381 cgcagcaggc gcgggaatac ctggattttc gtgcgcacgg gttaaacgtc gcttgtgaac
     1441 aattgcggca aaatatccat caggtcgaag aaagtttgca gctattgcaa ctcaatcagg
     1501 cgcaggtgag cggcgagatt aaacatgaaa tcgagctggc cctgacctcc gccaaccact
     1561 ttctgcgtca acagcaagat gcgctgaatg cgcagttagc cgccttgttt caggatgatt
     1621 cggagccgtt aagcgagatt cgtacctgct gtgagacact gttacagacg gcgcagaaca
     1681 ccatcagtcg cgactttacg ctgcgttttg ccgagcttga atccaccctt tgccgggtgt
     1741 taaccgatgt tattcggccc attgagcaac aagtcaaaat ggaattgagc gagtcagggt
     1801 ttcgtcctgg gtttcatttt cctgtttttc acggagtagt tccccacgtc aacactcgcc
     1861 agctgttcag tgaagtcatt tcgcgccagg aggcaacgga cgagcagagc acgcgtttag
     1921 gcgttgtgcg tgagactttt tcgcgctggt tgaatcagcc cgactgggga cggggaaatg
     1981 agaaatcccc gacagaaacg gttgattaca gtgtgttgca acgagcatta agcgcagaag
     2041 tcgatcttta ttgccaacaa atggctaaag ttctggcaga gcaggtcgat gaatctgtta
     2101 cggcaggcat gaatactttt ttcgctgagt tcgcttcatg tttgacggaa ttacagacgc
     2161 gtttacgcga aagcctggct ctgcgtcaac aaaatgaatc ggtggtcagg ctgatgcagc
     2221 agcaattgca gcagactgtg atgactcacg gctggattta caccgacgcc cagctgttac
     2281 gcgatgatat tcaaacactt ttcacggcag aacgatattg accaagacgt tactggacgg
     2341 ccccggtcgc gtgctggagt cggtttatcc ccgcttttta gtggatctgg cgcagggcga
     2401 tgatgcccgc cttccacaag cccatcagca gcagtttcgt gaacgactga tgcaggaact
     2461 tctttcgcgt gtgcagcttc agacatggac gaacggcggc atgttaaatg cgccgcttag
     2521 cctgcgactg acaatggtgg aaaaactggc gtcgatgctg gatcccggtc atctggcgct
     2581 gacgcagatc gcgcagcatc tggcgctgct gcaaaaaatg gatcaccgcc agcactctgc
     2641 tttcccggag ctcccccagc aaattgccgc cttgtatgag tggttttcag cccgttgtcg
     2701 ctggaaggaa aaggcgttaa cgcaacgagg ccaggcctac tggtgcaggc aggtgatcag
     2761 agcgagcaaa tttttacccg ctggcgtgct ggggcgtata acgcctggtc gttgcctggg
     2821 cgctgtttta tcgttctcga agagttgcgt tggggggcat ttggcgatgc ctgtcgtctg
     2881 ggaagcccgc aagcggtggc gttgctgctg ggtgatttgc gcgtgaaagc gacacaacat
     2941 ctggcagaga gtatcaatgc ggccccgacc acgcgtcact attaccatca gtggtttgcc
     3001 tcttcgaccg ttccgacggg cggggatcat gctgattttt taagttggct gggaaagtgg
     3061 accacggcag ataaacaacc cgtttgctgg tcagtgaccc aacgttggca aactgtcgcg
     3121 ctggggatgc cacgactctg ttcagcgcag cgtttggtgg gggcaatggt cgaggaaatc
     3181 ttctctgtaa atttggcgta aataatcagt tacatcaatg agtcctaaac gaaatccatg
     3241 tgtgaagttg atcacaaatt taaatactgg tagggtaaaa aggtcattaa ctgcccaatt
     3301 caggcgtcaa ctggtttgat tgtacattcc ttaaccggag ggtgtaagca aacccgctac
     3361 gcttgttaca gagattgcat cctgcaattc ccgctcccct tttgcggccg tcgcgctgat
     3421 ttttctggcg tttgcggaaa tgggccaact ctgcgaggaa agctatgctg aaaaggaaaa
     3481 aagtaaaacc gattaccctt cgtgatgtca ccattattaa tgacagtaaa ctgcgtaaag
     3541 ccattaccgc agcatcactg ggtaatgcaa tggaatggtt cgattttggt gtttatggtt
     3601 ttgttgctta cgcattaggt aaagtttttt tcccgggggc tgaccccagc gtgcagatgg
     3661 ttgctgcact tgccactttc tccgttccct ttctgattcg accgcttggc ggactcttct
     3721 ttggtatgtt gggcgataaa tatggtcgcc agaagatcct cgctatcact attgtgatta
     3781 tgtcgatcag tacgttctgt attggcttaa taccgtccta cgacacgatt ggtatttggg
     3841 caccgattct gctgttgatc tgtaagatgg cacaaggttt ctcggtcggc ggtgaatata
     3901 ccggggcgtc gatatttgtt gcggaatact cccctgaccg taaacgtggc tttatgggca
     3961 gctggctgga cttcggttct attgccgggt ttgtgctggg tgcgggcgtg gtggtgttaa
     4021 tttcgaccat tgtcggcgaa gcgaacttcc tcgactgggg ctggcgtatt ccgttcttta
     4081 ttgctctgcc gttagggatt atcgggcttt acctgcgcca tgcgctggaa gaaactccgg
     4141 cgttccagca gcatgttgat aaactggaac agggcgaccg cgaaggtttg caggatggcc
     4201 cgaaagtctc gtttaaagag attgccacta aatactggcg cagcctgttg acatgtattg
     4261 gtctggtaat tgccaccaac gtgacttact acatgttgct gacctatatg ccgagttatt
     4321 tgtcgcataa cctgcattac tccgaagacc acggggtgct gattattatc gccattatga
     4381 tcggtatgct gtttgtccag ccggtgatgg gcttgctgag tgaccgtttt ggccgtcgtc
     4441 cgtttgtgct acttggtagt gttgccctgt ttgtgttggc gatcccggcg tttattctga
     4501 ttaacagtaa cgtcatcggc ctgatttttg ccgggttact gatgctggcg gtgatcctta
     4561 actgctttac gggcgttatg gcttctacct tgccagcgat gttcccgacg catatccgtt
     4621 acagcgcgct ggcggcggca tttaatattt cggtgctggt tgccggtctg acgccaacac
     4681 tggcggcctg gctggtcgaa agctcgcaga atctgatgat gcctgcctat tacctgatgg
     4741 tagtggcggt gattggttta atcaccggcg taaccatgaa agagacggca aatcgtccgt
     4801 tgaaaggtgc gacaccggcg gcgtcagata tacaggaagc gaaggaaatt ctcgtcgagc
     4861 attacgataa tatcgagcag aaaatcgata atattgacca cgagattgcc gatttgcagg
     4921 cgaaacgtac ccgcctggtg cagcaacatc cgcgaattga tgaataagct gaaacggatg
     4981 gcctgatgtg acgctgtctt atcaggccaa ttgaactctt aaggttcact taatctctga
     5041 cgcgcatact ctcctccagg ttaacggagg agagtgcaat gaaaaaccgt gtttatatga
     5101 aagtttaact accgtgttca gcgtgctggt ggtcagcagc tttctttata tctggtttgc
     5161 cacgttctga tctttcttca gccgtaccta ggcccgcgtg ccggaagtct cttgccggtt
     5221 ttgcaggaaa aactgcccgt gatgcaactg tgtaatgcgg ctgacaatac ttaaccccag
     5281 accaatcccg ccataacggc tgtccatacg tacaaacgct ttactcaact ccccgcattt
     5341 actctcatca atacctggtc cttcatcttc aactgccatg accgctccgc catcttcttg
     5401 cagcttaatc ataatgttgc tgccttgcgg gctgtaacga tgggcgtttt ctaccaggtt
     5461 tcgcaataac atccgcagca gggttgcatc accctgaacg gtgatgtcgg cggcgctctc
     5521 tggcaatagc agggtttgct gtcgctggtc gagcatggta ctgagttcgt catacgaggg
     5581 gagaatgaca tcttccagca gttttacatg ttgataatta ccggaagaaa atgactgtcc
     5641 ggcacgcgcc agttgcagca gctgggagac gctctccatc atctgatcaa gccgtgccac
     5701 taacggtgct acatcaatgt gatgcgtttt cgccagcagt tccagatgca aacgcacccc
     5761 cgccagtggc gttcgcagtt cgtgcgcgac gtcagcggta aacaaccttt cgttatccag
     5821 cgtgctggtc aggcgactga ccagatcgtt caacgccgaa accaccgctt cgatttcgag
     5881 ggtggcgctg tgaatggcaa tgggcgttaa gttgtcggca gtgcgcgctt ccagctcttt
     5941 ttgcagctcc gccagcgggc gggtgatgcg gcgtaccgcc tgatagcaga taaatagcgt
     6001 caggctgacc ataaagacgc cggggacaat caggctggcg accgcctcgc ggatctcacg
     6061 catgatgtgg cgatcgttgt tgcgattgtc gcgtagcgcc tgctcaaaca gctgaatctg
     6121 ctcggtactt tcatgccata gccagaagac gctgatcagc tcaaacacca acaaaatggc
     6181 cccgatagtc aatatcagcc gttggcgcag cgatattggt cggcgcagaa aacgcatcag
     6241 attcaattag ttttcctcat tcgcgaccag catatagcca aagccgcgca cggtgcggat
     6301 acgggatttg cccactttgt cgcgcagatt gtggatatgc acttccaggg tgttggtcga
     6361 gggttcattg tcccagttat agatgtcgtt gtagagaatt tcccgatgta ccggactgcc
     6421 tgctttgagc attaaccgtg acagcagagc atattctttg ggcgtcagaa tcaactcttc
     6481 accgcccatc catacctgac ggcgacccat attcagcgtc agattgccaa caatcagctc
     6541 actttcgccc tgattattat ggcgtcgtag cagggcgcgg atacgggcgt gtaactcttc
     6601 cagcgcaaaa ggcttcacca gatagtcatc ggcaccgaca tccagcccgg cgattttgtc
     6661 ggtcagcgta tcgcgagcgg tgaggatcag taccggcagg gtatattttt tctgccggat
     6721 acgggcgaga aaatgcagtc catcttcgtc gggtaaccct aaatccagta ccaccaggct
     6781 gtaatgaccg gcttcaaggc tttgttccgc catccgcgcg gttgtcacgc catcgcacgc
     6841 gtagccttcg gtttgcgccg ccagaatcag tccctgcaat aacagcgtat cgtcttcaac
     6901 aatcagaatt ttcatttact cactctcctg caagtttgca gaatatcatc cgcagcctgg
     6961 taatacttcg tctcaacgcc agttaatccc aatagcgtgg agaataaatt gtcttgtgaa
     7021 tagtgttgcg tttgcgcctg tttttgcagg cagttctggt caacctgata ccgtttttga
     7081 taatcctccg acagccacag cagcatcggc acctgttttt ggctatccgg ggcgatggca
     7141 taaggcagac cgtgcagata gatgccattt tcacctaacg attcaccgtg gtcagaaaga
     7201 taaaccaggc tggtggtaaa tttatcctga tgttctttca gcagattaat cgctttatca
     7261 acaatatagt cgacgtaaac cagcgtgttg tcgtaagtgt tcaccagttg ctctttggta
     7321 caggtctgga tctcattggt gtcgcaggtt ggggtaaatt tcctgaactg cggcggatag
     7381 cggttgtaat aggtcggacc gtggctgccg atggtgtgta agacaatcac gccatcaccc
     7441 tgcaggttat tgatgtactc ttccagcccg tggaacagca cttcgtcata gcattcgccg
     7501 ttgatgcact gaccaggcag attcagcgcg gtgacgttct ggtgaggcac gcggtcgcag
     7561 gcacctttac agccgccatc gttgtcattc cacagcacgt tgatgcccgc tcgctgaatg
     7621 atatccagca cgccttcctg gtgctgtgcc agctcttctt tgtaatgctc acgcggcata
     7681 tccgagaaca tgcacggtac tgaaactgcc gttgccgtgc cgcaagatac ggtattaggg
     7741 aaatagacca cgttatcttt cgccagccgc gggttagttt cacgcgggta gccgttgagg
     7801 gagaagttct ccgcccgcga ggtttcgccg acaatcagga tggtcaaatt tttacgtttt
     7861 tcgttctgca ttaacgggtt gcggtgggcg tcttcaccaa ttcgcaccag cggtagattt
     7921 gccagtcgct gatgggagta ccatgaccag ctggcaacaa tgctgttaga ggggcttaag
     7981 gatttcacca gctctttgtt attgcggaac aacgaggcgt agtctttata aaacagtgcg
     8041 gcgaccagca aaatcagtag tacagaaacc agaatattgg ctccacggaa aagaacactg
     8101 cgcagacgcg aggtggcagg tttgattttt atccagcagg caatcagcgc agcaagcacg
     8161 ccgctgaatc ccagcgttaa taacatttgc ggtgtcatca gcgcataact ttctgccgga
     8221 gtggtatcaa taatattggc aatcatcgag cggtcgatga cgatgccgta agtcattatg
     8281 aaatattgtg cagccgcgcc aaccagaata aacaggcagg ccagtggtcg attaagccat
     8341 aagaaagagc ttagtgtcag gacaatatta atcacgctga aagcgacgac cggcatcgac
     8401 aagaaaacca gtacgttatg cagcgaatcc agcggcagcg cctgcaacac ctgtttaaaa
     8461 aaggcaatat tcaggcagat agagatataa aaagcggcca acaatagcca ggcgagtaaa
     8521 ttcaaagagg gtctttttag taggcgcttc aacatcacgg tgtttccatc gaacaaagtg
     8581 cgcatatgct cgcaaagcaa aattaagcca accttaagtt cttaaggttg gcttttatgt
     8641 ttgctggatt aaggggaatt aatctttgct tattggtgca tctaagggat acgggttttt
     8701 atgtagccgg ttgtaattca gcgcatacat ggcggtgatg accatcaggg tgacaaatga
     8761 ccacataacc tctttcgctc cggaccccac cacggcccag atgcagtaga ggaaggcaat
     8821 ggtagtaact gccagatatg ccgggcgtgc tttaccaaag tgaccgtgtc cgagcagcag
     8881 taacgccgca caggtgtaaa gatatggcac cagtgtaaag atgaccgaga cggaagaaac
     8941 cagaccgaac tctttggtcg cgtttggtga aatgctgctg agctggaaga tggtcatcaa
     9001 aataccgacg ataatcagcc ccgccactgg cgtacccgct ttatttacac gggcaaaaat
     9061 cggtgggaac agtccgtcat cggcagcggc tttcgccgtt tgacccgcca gcaacgtcca
     9121 gccgcccagt gaacctaagc aacccgcagc tgcgcagaag gaaacaatgg ccccgggggt
     9181 gtcacccaac gccatccgtg cggcatcacc gaatggcgaa gcagaaacgc gcagtgcggc
     9241 attagggatc atccccataa tcgcggtggt agaaagtaca tagcaaacgg cggcaatcaa
     9301 taccccacca atggtggcga tagggacatt gcgtttcggg tttttcacca cacctgcggc
     9361 aacggaggca ctttccacac cgatgaacga ccacagcgta acgttaaggg tactttgaat
     9421 tgcaccgaag gtacccaggc cgctgacgtt ccatgccgcc atataggttt caccacggaa
     9481 ccagaaccag ccaaatacgg caatcccgac gatggggatc agcgccagca cggtggcaac
     9541 tgcctgcaca cgggtgatca ttttcggacc aacaatgttc agcaggacga agatccacag
     9601 caccacgacg caggtgatgg ttaataccaa tggatctttc agaatcggga agaagtaact
     9661 taaatatcct acgccaatga ccaccatggc gatattgccg atccagcagg ccagccagta
     9721 gaggacgttg gtttgataac cgagaaacgg gccaaagcag cggcgggcgt aagcgtaaga
     9781 accaccagga cttgggtcga ggaacgacat tttggcgtat accatcgaga gccccagtgc
     9841 accgataatc gtcaccaacc atccataaat ggcaatcccg ccagtggagg ccaggtttgc
     9901 aggtaacaga aaaacacctg accccataat attccccgac accatcaggg tgacggggat
     9961 taagcccact ttgtgagcat cagcatccga agacataatt aaactcctgc gaaggcgagc
    10021 ttcgtgacaa taaattacgt catatcatac gcctgcattc gatagttgaa ttattatcga
    10081 ccgggttatc gctgatgccg ttattaatat agctcttcgt taaggttaaa aatcaggcga
    10141 cagtgcgttc tctgtgctga ctaacataat gcagcggcgt cataccgtag aagtctttaa
    10201 agacagaaat aaagtacgac gtactgttgt agccgcagga ctgtgatacc tgagagatat
    10261 ttttaccgtc catcattaat tcatttacgg cataacgcat gcggcaggtg gtgattattt
    10321 ggctataact ggtgttttcg cttttcagct ttttctttaa cagacttggg ctaagacata
    10381 aacaactggc taccatacta agattccagt ctttgtgaat atcgctttca ataatttgat
    10441 aaacgctgtc acttacacaa ttacgtaaca tatacatcat taatgaaagg aattttttac
    10501 tgtcgagaaa acgggatagc accgtgaata ataatgcgcg tgttcgttcc ttttctgact
    10561 cagtttctgc gggcatcatg ctgtgttgcg cggcaacgcg aaagacgtct ggcgtcaggc
    10621 atggcagggt gagtatgggc gtagcgctac gttgccatac tggtatttgc gagagatctt
    10681 tattcagaaa ccggaggtaa tctttgatga tgtcgtgact aatatgagca accaaagtgt
    10741 tgttaagaga ggagacgtcg ataatattat tttcacaatt taataacgcc atatggttag
    10801 ctttaaggct aataggttct ttcccattca cccttatcca gacatctttt tcagtcaata
    10861 aaacaataca aggttggtcg ctgcaaatcc tcatacatgt actcctgagt gcgaataaaa
    10921 gaccagttct cgctaaagca aagcgatacc gggaaatggt tatataattg tatgacgaat
    10981 ataaacatgc ataaaaataa cgagttttac taatattaca aatttttata gtaatttctc
    11041 atgtacatat ttttttacag ggtaaataac aggcaaaaaa aagcgcgggg tggggccgcg
    11101 caaaaagtat gacatttttg tttgcagcaa tttttatgaa aacgttgcca tactcaaaag
    11161 gcctaaggcc aggcggcgta atgttattta aacaattacg ccttcagcgg aatagtggtt
    11221 acgctttcac acacatagcg tggtaaatac cgtcaataat ttcagtccct tcagtttcgt
    11281 gttcaaatcc agggaaatgg tggtcccagg attgcagcga gcgtaaataa cttacttgcg
    11341 gactgttttt atcgccgaag ttttcaccag acagcagcat cgggattcct ggcggatatg
    11401 ggataactga gtttgccgcg atgcgtcctg gcagattttc aatggatacc agttcgacat
    11461 tgttgtcgac aatcgcgttg tacgcttcac gcggggtgat ttccgccacc ggcaggccgg
    11521 aataggcttc gttcaaccgt gcgccagggt tgttttcttt cagccaggca aacatggtgt
    11581 cacccagatc gtgaatcccc atgttcgcgt aagtgtcagg atattgttca acaagttccg
    11641 gcatcacctg cgccagcggt gtgttggcgt catagtggcg tttgaaggag caaagggtgt
    11701 taaccagagt cccccatttc ccacgggtta cgcccataga gaacaggaac ataatttgga
    11761 agtcagtggt gcgggtaggc acaatgccgt ggcgaccaag ccaggcagtg accagcgccg
    11821 ccggaacacc ggtttcttcc agttcaccat cttcacccat tcccggagca aggatgctga
    11881 ctttaatcgg gtcgagcata ctccagttat ccggaatatc tttgaagccg tgccagcttt
    11941 cgcccggatg cattacccag tagtcctgaa cggtggtcag cagtttggtt ggtgcgtcag
    12001 caaagtcata ggttttgccg gtttgtgggt cggtgacgac ttctttgttc cacggtttga
    12061 agaaccagct accgtcagcg gtgaactctt tatacagccg cgccatcgcc tgacggaaat
    12121 caaccgcttc gtcgatcact tcctgcgtca gtgacaggcc gctgttgccg tccatcatcg
    12181 acaccgccac gtcgttggat gcgcagatgg catacagcgg ggaggtggtg gcatgcatca
    12241 tgtaggcctg gttgaagcgg gagaagttaa tcgccccacg accttcacgt acatgaatat
    12301 aagaagcctg tgaaagcgca ttcagcagtt tgtgggtgga gtgggtggcg aaaacggtag
    12361 gaccgttgtg atcgccaggt tcgccgcgca tggcatagtg atcggcatag atcgggttga
    12421 aacgtgcata gccgtaccag gcttcgtcaa agtgcagacg atcggaggtt ttttccagca
    12481 gatcctgcgc ttctttagcg ttataacaca cgccgtcata ggtgcagttg gtcaccacgc
    12541 agtaagacgg tttttgcccg gctttgtctt tagtcagcgg gctttcactg attttcttct
    12601 gcaaggtttc aggttgcatt tcctgcggat agattggccc gataatgccg tagcggttgc
    12661 ggcttggcac catgtagacc ggtttcgcgc ctgtcagcat caagccttgt tcgatggatt
    12721 tatggcagtt acggtcaacg accacgacat cgttatcggt catgcaagcc tgcatgatgg
    12781 tgcggttaga gccggaagta ccgacgacta ccgaccagga gcgatcggca ccaaatacgc
    12841 gtgcggcata tttttcgctt tcgccaaatg cgccagtatg gtcaagcaaa gaaccgaggg
    12901 aagttcgttc gatgcccata tcggtgcgga acagattttc tccatagtag tcatggtaga
    12961 aacgtccggc gggtgttttg gtaaaaccaa cgccgccctg gtggcctggc gctgcccagg
    13021 aatattcatg gatgtcgcta tacttcatca gcgcgctgaa cagtggcggc aacagctgct
    13081 ggcggtagcg ggtcatcgcg gcaacggcgc gtccggcgat aaagtcggtg gtatcttcca
    13141 gaatccaggc gaattcatcg acaagctcca gcaggtcgcg atccattgcg gcgagggctt
    13201 tttcccgatc gcccaacagg aagaccggca cgttttgttg gcgctcatga agcttaccga
    13261 tcaattgtct gacgttttga tgttcgtccg gatgttccat ttgatagctg aacatcaggc
    13321 agtcaatggc ttcgtttgaa gagagaatgg caaaaccatc atcaaaggag gtggatttaa
    13381 tcacggtaac attttgctgg cttaaagcat ctgccagacg ctcaacggcg ttaccgaccc
    13441 aggtgtcttg atggagaaac tcgctttcaa caattaatac tttcatcatt gcttacccgg
    13501 ttatgaagga atcttcgttg cgggcaagta tcttccggcc ttttcgggct gtaaagcgcg
    13561 tgaaaaacaa acatttttga aatatttatt tttataaaca atgcgttatg tgattatttt
    13621 aaattatttt cactgcttgt tatcgacggc taaactattt ttttggctga tactgatatc
    13681 gtctttagcc gggaaacgtc tggcggcgct gttggctaag tttgcggtat tgttgcggcg
    13741 acatgccgac atatttgccg aacgtgctgt aaaaacgact acttgaacga aagcctgccg
    13801 tcagggcaat atcgagaata cttttatcgg tatcgctcag taacgcgcga acgtggttga
    13861 tgcgcatcgc ggtaatgtac tgtttcatcg tcaattgcat gacccgctgg aatatcccca
    13921 ttgcatagtt ggcgttaagt ttgacgtgct cagccacatc gttgatggtc agcgcctgat
    13981 catagttttc ggcaataaag cccagcatct ggctaacata aaattgcgca tggcgcgaga
    14041 cgctgttttt gtgtgtgcgc gaggttttat tgaccagaat cggttcccag ccagagaggc
    14101 taaatcgctt gagcatcagg ccaatttcat caatggcgag ctggcgaatt tgctcgttcg
    14161 gactgtttaa ttcctgctgc cagcggcgca cttcaaacgg gctaagttgc tgtgtggcca
    14221 gtgatttgat catcatgccg tgagtgacgt ggttaatcag gtctttatcc agcggccagg
    14281 agagaaacag atgcatcggc agattaaaaa tcgccatgct ctgacaggtt ccggtatctg
    14341 ttagttggtg cggtgtacag gcccagaaca gcgtgatatg accctgattg atattcactt
    14401 tttcattgtt aatcaggtat tccacatcgc catcgaaagg cacattcact tcgacctgac
    14461 catgccagtg gctggtgggc atgatatgcg gtgcgcgaaa ctcaatctcc atccgctggt
    14521 attccgaata cagcgacagc gggctgcggg tctgtttttc gtcgctgctg cacataaacg
    14581 tatctgtatt catggatggc tctctttcct ggaatatcag aattatggca ggagtgaggg
    14641 aggatgactg cgagtgggag cacggttttc accctcttcc cagagaggcg aggggagcgt
    14701 ccgagcatca tgaggccgaa aactctgctt ttcaggtaac ttattaccat aaactcagat
    14761 ttactgctgc ttcacgcagg atctgagttt atgggaatgc tcaacctgga agccggaggt
    14821 tttctgcaga ttcgcctgcc atgatgaagt tattcaagca agccaggaga tctgcatgat
    14881 gactgcaccc aaaattacat ttatcggcgc tggttcgacg attttcgtta aaaatattct
    14941 tggtgatgtg ttccatcgag aggcgctgaa aacggcgcat attgccctga tggacattga
    15001 tcccacccgc ctggaagagt cgcatattgt ggtgcgtaag ctgatggatt cagcaggggc
    15061 cagcggcaaa atcacctgcc acacccaaca gaaagaagcc ttacaggatg ccgattttgt
    15121 cgtggtggca tttcagattg gcggttatga accttgcacg gtgactgatt tcgaggtctg
    15181 taagcggcat ggtctggaac aaaccattgc cgatacgttg gggccgggcg gtattatgcg
    15241 cgcgctacgt accattccgc atctgtggca aatttgcgag gacatgacgg aagtctgccc
    15301 cgatgccaca ttgctcaact acgttaaccc aatggcgatg aatacctggg cgatgtatgc
    15361 ccgctatccg catatcaaac aggtagggct gtgccattcg gtgcagggaa cggcggaaga
    15421 gctggcgcgt gacctcaata tcgatccgtc cacgctgcgt taccgttgcg ctggtatcaa
    15481 ccatatggcg ttttacctgg aactggagcg taaaaccgcc gacggcagtt acgtgaatct
    15541 ctacccggaa ctgctggcgg cttatgaagc agggcaggca ccgaagccac atattcatgg
    15601 taatactcgc tgccagaata ttgtgcgcta cgaaatgttc aaaaagctgg gctacttcgt
    15661 cacggaatcg tcagaacatt ttgccgaata tacgccgtgg tttattaagc caggtcgtga
    15721 ggatttgatt gagcgttata aagtaccgct ggatgagtac ccgaaacgct gcgtcgagca
    15781 gctggcgaac tggcataaag agctggagga gtataaaaac gcctcccgga ttgatattaa
    15841 accgtcacgg gaatatgcca gcacaatcat gaacgctatc tggactggcg agtcgagtgt
    15901 gatttacggc aacgtccgta acgatggttt gattgataac ctgccacaag gatgttgcgt
    15961 ggaagtagcc tgtctggttg atgctaatgg cattcagccg accaaagtcg gtacgctacc
    16021 ttcgcatctg gccgccctga tgcaaaccaa catcaacgta cagacgctgc tgaccgaagc
    16081 tattcttacg gaaaatcgcg accgtgttta ccacgccgcg atgatggacc cgcatactgc
    16141 cgccgtgctg ggcattgacg aaatatatgc tcttgttgac gacctgattg ccgcccacgg
    16201 cgactggctg ccaggctggt tgcaccgtta aaacgcgact aaacgctact gcgccggggg
    16261 atttattccg gcgcacacct ctgacgatac caataacaga aggcgggcgt tggtaacagc
    16321 gacccgatac cctatgagca tttcaatgac tacaaaactc agttatggat ttggagcgtt
    16381 cgggaaggat tttgcgatcg gcattgtgta tatgtacctc atgtattact acaccgatgt
    16441 cgttgggctg tctgtgggtt tggtcggtac tttgtttctg gtggcgagga tctgggatgc
    16501 tattaacgat ccgattatgg g
//
LOCUS       DADMJE010000090        16511 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.091, whole genome shotgun sequence.
ACCESSION   DADMJE010000090 DADMJE010000000
VERSION     DADMJE010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16511)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16511)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16511
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.091"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(377..1477)
                     /gene="chaA"
                     /locus_tag="JN001_002557"
     CDS             complement(377..1477)
                     /gene="chaA"
                     /locus_tag="JN001_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-potassium/proton antiporter ChaA"
                     /protein_id="HAY9053748.1"
                     /translation="MSNAQEAVKTRHKEISLIFPVLALVVLFLWGSSQTLPVVIAINL
                     LALIGILSSAFSVVRHADVLAHRLGEPYGSLILSLSVVILEVSLISALMATGDAAPTL
                     MRDTLYSIIMIVTGGLVGFSLLLGGRKFATQYMNLFGIKQYLIALFPLAIIVLVFPMA
                     LPAANFSTGQALLVALISAAMYGVFLLIQTKTHQSLFVYEHEDDSDDDDPHHGKPSAH
                     SSVWHAIWLIIHLIAVIAVTKMNASPLETLLDSMNAPVAFTGFLVALLILSPEGLGAL
                     KAVLNNQVQRAMNLFFGSVLATISLTVPVVTLIAFMTGNKLQFALGAPEMVVMVASLV
                     LCHISFSTGRTNVLNGAAHLALFAAYLMTIFA"
     gene            1747..1977
                     /gene="chaB"
                     /locus_tag="JN001_002558"
     CDS             1747..1977
                     /gene="chaB"
                     /locus_tag="JN001_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative cation transport regulator ChaB"
                     /protein_id="HAY9053749.1"
                     /translation="MPYKTKSDLPESVKHVLPSHAQDIYKEAFNSAWDQYKDKDDRRD
                     DASREETAHKVAWAAVKHEYAKGDDDKWHKKS"
     gene            2135..2830
                     /locus_tag="JN001_002559"
     CDS             2135..2830
                     /locus_tag="JN001_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415736.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HAY9053750.1"
                     /translation="MITRDFLMNADCKTAFGAIEESLLWSAEQRAASLAATLACRPDE
                     GPVWIFGYGSLMWNPALEFTESCTGTLVGWHRAFCLRLTAGRGTAHQPGRMLALKEGG
                     RTTGVAYRLPEETLEQELTLLWKREMITGCYLPTWCQLDLDDGCTVNAIVFIMDPRHP
                     EYESDTRAQVIAPLIAAASGPLGTNAQYLFSLEQELIKLGMQDDGLNDLLVSVKKLLA
                     ENYPDGVLRPGFA"
     gene            complement(2874..3227)
                     /gene="ychN"
                     /locus_tag="JN001_002560"
     CDS             complement(2874..3227)
                     /gene="ychN"
                     /locus_tag="JN001_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsrE/F sulfur relay family protein YchN"
                     /protein_id="HAY9053751.1"
                     /translation="MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFLMSD
                     AVTAGLRGQKPGEGYNIQQMLEILTAQNVPVKLCKTCTDGRGISTLPLIDGVEIGTLV
                     ELAQWTLSADKVLTF"
     gene            3411..4805
                     /gene="ychO"
                     /locus_tag="JN001_002561"
     CDS             3411..4805
                     /gene="ychO"
                     /locus_tag="JN001_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415738.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inverse autotransporter invasin YchO"
                     /protein_id="HAY9053752.1"
                     /translation="MSRFVPRIIPFYLLLLVAGGTANAQSTFEQKAANPFDNNNDGLP
                     DLGMAPENHDGEKHFAEIVKDFGETSMNDNGLDTGEQAKAFALGKVRDALSQQVNQHV
                     ESWLSPWGNASVDVKVDNEGHFTGSRGSWFVPLQDNDRYFTWSQLGLTQQDNGLVSNV
                     GVGQRWARGNWLVGYNTFYDNLLDENLQRAGFGAEAWGEYLRLLANFYQPFAAWHEQT
                     ATQEQRMARGYDLTARMRMPFYQHLNTSVSLEQYFGDRVDLFNSGTGYHNPVALSLGL
                     NYTPVPLVTVTAQHKQGESGENQNNLGLNLNYRFGVPLKKQLSAGEVAESQSLRGSRY
                     DNPQRNNLPTLEYRQRKTLTVFLATPPWDLKPGETVPLKLQIRSRYGIRQLIWQGDTQ
                     ILSLTPGAQANSAEGWTLIMPDWQNGEGASNHWRLSVVVEYNQGQRVSSNEITLTLVE
                     PFDALSNDELRWEP"
     gene            complement(4806..5456)
                     /gene="narL"
                     /locus_tag="JN001_002562"
     CDS             complement(4806..5456)
                     /gene="narL"
                     /locus_tag="JN001_002562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator NarL"
                     /protein_id="HAY9053753.1"
                     /translation="MSNQEPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQG
                     IELAESLDPDLILLDLNMPGMNGLETLDKLREKSLSGRIVVFSVSNHEEDVVTALKRG
                     ADGYLLKDMEPEDLLKALHQAAAGEMVLSEALTPVLAASLRANRATTERDVNQLTPRE
                     RDILKLIAQGLPNKMIARRLDITESTVKVHVKHMLKKMKLKSRVEAAVWVHQERIF"
     gene            complement(5449..7245)
                     /gene="narX"
                     /locus_tag="JN001_002563"
     CDS             complement(5449..7245)
                     /gene="narX"
                     /locus_tag="JN001_002563"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/nitrite two-component system sensor
                     histidine kinase NarX"
                     /protein_id="HAY9053754.1"
                     /translation="MLKRCLSPLTLVNQVALIVLLSTAIGLAGMAVSGWLVQGVQGSA
                     HAINKAGSLRMQSYRLLAAVPLSEKDKPLIKEMEQTAFSAELTRAAERDEQLAQLQGL
                     QDYWRNELIPALMRAQNRETVSADVSQFVAGLDQLVSGFDRTTEMRIETVVLVHRVMA
                     VFMALLLVFTIIWLRARLLQPWRQLLAMASAVSHRDFTQRANISGRNEMAMLGTALNN
                     MSAELAESYAVLEQRVQEKTAGLEHKNQILSFLWQANRRLHSRAPLCERLSPVLNGLQ
                     NLTLLRDIELRVYDTDDEENHQEFTCQPDMTCDDKGCQLCPRGVLPVGDRGTTLKWRL
                     ADSHTQYGILLATLPQGRHLSHDQQQLVDTLVEQLTATLALDRHQERQQQLIVMEERA
                     TIARELHDSIAQSLSCMKMQVSCLQMQGDALPASSRELLSQIRNELNASWAQLRELLT
                     TFRLQLTEPGLRPALEASCEEYSAKFGFPVKLDYQLPPRLVPSHQAIHLLQIAREALS
                     NALKHSQASEVVVTVAQNDNQVKLTVQDNGCGVPENAIRSNHYGMIIMRDRAQSLRGD
                     CRVRRRESGGTEVVVTFIPEKTFTDVQGDTHE"
     gene            7584..8975
                     /gene="narK"
                     /locus_tag="JN001_002564"
     CDS             7584..8975
                     /gene="narK"
                     /locus_tag="JN001_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate transporter NarK"
                     /protein_id="HAY9053755.1"
                     /translation="MSHSSAPERATGAVITDWRPEDPAFWQQRGQRIASRNLWISVPC
                     LLLAFCVWMLFSAVAVNLPKVGFNFTTDQLFMLTALPSVSGALLRVPYSFMVPIFGGR
                     RWTAFSTGILIIPCVWLGFAVQDTSTPYSVFIIISLLCGFAGANFASSMANISFFFPK
                     QKQGGALGLNGGLGNMGVSVMQLVAPLVVSLSIFAVFGSQGVKQPDGTELYLANASWI
                     WVPFLAIFTIAAWFGMNDLATSKASIKEQLPVLKRGHLWIMSLLYLATFGSFIGFSAG
                     FAMLSKTQFPDVQILQYAFFGPFIGALARSAGGALSDRLGGTRVTLVNFILMAIFSGL
                     LFLTLPTDGQGGSFMAFFAVFLALFLTAGLGSGSTFQMISVIFRKLTMDRVKAEGGSD
                     ERAMREAATDTAAALGFISAIGAIGGFFIPKAFGSSLALTGSPVGAMKVFLIFYIACV
                     VITWAVYGRHSKK"
     gene            9491..13213
                     /locus_tag="JN001_002565"
     CDS             9491..13213
                     /locus_tag="JN001_002565"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit alpha"
                     /protein_id="HAY9053756.1"
                     /translation="MSKFLDRFRYFKQKGETFADGHGQLLNTNRDWEDGYRQRWQHDK
                     IVRSTHGVNCTGSCSWKIYVKNGLVTWETQQTDYPRTRPDLPNHEPRGCPRGASYSWY
                     LYSANRLKYPMMRKRLMKMWREAKALHSDPVEAWASIIEDADKAKSFKQARGRGGFVR
                     SSWQEVNELIAASNVYTIKNYGPDRVAGFSPIPAMSMVSYASGARYLSLIGGTCLSFY
                     DWYCDLPPASPQTWGEQTDVPESADWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGT
                     KTVAVTPDYAEIAKLCDLWLAPKQGTDAAMALAMGHVMLREFHLDNPSQYFTDYVRRY
                     TDMPMLVMLEERDGYYAAGRMLRAADLVDALGQENNPEWKTVAFNTNGEMVAPNGSIG
                     FRWGEKGKWNLEQRDGKTGEETELQLSLLGSQDEIAEVGFPYFGGDGTEHFNKVELEN
                     VLLHKLPVKRLQLADGSTALVTTVYDLTLANYGLERGLNDVNCATSYDDVKAYTPAWA
                     EQITGVSRSQIIRIAREFADNADKTHGRSMIIVGAGLNHWYHLDMNYRGLINMLIFCG
                     CVGQSGGGWAHYVGQEKLRPQTGWQPLAFALDWQRPARHMNSTSYFYNHSSQWRYETV
                     TAEELLSPMADKSRYTGHLIDFNVRAERMGWLPSAPQLGTNPLTIAGEAEKAGMNPVD
                     YTVKSLKEGSIRFAAEQPENGKNHPRNLFIWRSNLLGSSGKGHEFMLKYLLGTEHGIQ
                     GKDLGQQGGVKPEEVDWQDNGLEGKLDLVVTLDFRLSSTCLYSDIILPTATWYEKDDM
                     NTSDMHPFIHPLSAAVDPAWEAKSDWEIYKAIAKKFSEVCVGHLGKETDIVTLPIQHD
                     SAAELAQPLDVKDWKKGECDLIPGKTAPHIMVVERAYPATYERFTSIGPLMEKIGNGG
                     KGIAWNTQSEMDLLRKLNYTKAEGPAKGQPMLNTAIDAAEMILTLAPETNGQVAVKAW
                     AALSEFTGRDHTHLALNKEDEKIRFRDIQAQPRKIISSPTWSGLEDEHVSYNAGYTNV
                     HELIPWRTLSGRQQLYQDHQWMRDFGESLLVYRPPIDTRSVKEVIGQKSNGNPEKALN
                     FLTPHQKWGIHSTYSDNQLMLTLGRGGPVVWLSEADAKELGIADNDWIEVYNSNGALT
                     ARAVVSQRVPAGMTMMYHAQERIVNLPGSEITGQRGGIHNSVTRITPKPTHMIGGYAH
                     LAYGFNYYGTVGSNRDEFVVVRKMKNIDWLDGEGND"
     gene            13231..14769
                     /gene="narH"
                     /locus_tag="JN001_002566"
     CDS             13231..14769
                     /gene="narH"
                     /locus_tag="JN001_002566"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase subunit beta"
                     /protein_id="HAY9053757.1"
                     /translation="MKIRSQVGMVLNLDKCIGCHTCSVTCKNVWTSREGVEYAWFNNV
                     ETKPGQGFPTDWENQEKYKGGWIRKINGKLQPRMGNRAMLLGKIFANPHLPGIDDYYE
                     PFDFDYQNLHTAPEGSKSQPIARPRSLITGERMAKIEKGPNWEDDLGGEFDKLAKDKN
                     FDNIQKAMYSQFENTFMMYLPRLCEHCLNPACVATCPSGAIYKREEDGIVLIDQDKCR
                     GWRMCITGCPYKKIYFNWKSGKSEKCIFCYPRIEAGQPTVCSETCVGRIRYLGVLLYD
                     ADAIERAASTENEKDLYQRQLEVFLDPNDPKVIEQAIKDGIPLSVIEAAQQSPVYKMA
                     MEWKLALPLHPEYRTLPMVWYVPPLSPIQSAADAGELGSNGILPDVESLRIPVQYLAN
                     LLTAGDTKPVLRALKRMLAMRHYKRAETVDGKVDTRALEEVGLTEAQAQEMYRYLAIA
                     NYEDRFVVPSSHRELAREAFPEKNGCGFTFGDGCHGSDTKFNLFNSRRIDAIDVTSKT
                     EPHP"
     gene            14766..15476
                     /gene="narJ"
                     /locus_tag="JN001_002567"
     CDS             14766..15476
                     /gene="narJ"
                     /locus_tag="JN001_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate reductase molybdenum cofactor assembly
                     chaperone"
                     /protein_id="HAY9053758.1"
                     /translation="MIELVIVSRLLEYPDAALWQHQQEMFEVIAASKNLSKEDAHALG
                     IFLRDLTAMDPLDAQAQYSELFDRGRATSLLLFEHVHGESRDRGQAMVDLLAQYEQHG
                     LQLNSRELPDHLPLYLEYLSQLPQSEAVEGLKDIAPILALLSARLQQRESRYAVMFDL
                     LLKLANTAIDSDKVAEKIADEARDDTPQALDAVWEEEQVKFFADKGCGDSAITAHQRR
                     FAGAVAPQYLNITTGGQH"
     gene            15476..16153
                     /gene="narI"
                     /locus_tag="JN001_002568"
     CDS             15476..16153
                     /gene="narI"
                     /locus_tag="JN001_002568"
                     /EC_number="1.7.99.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="respiratory nitrate reductase subunit gamma"
                     /protein_id="HAY9053759.1"
                     /translation="MQFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQMLD
                     RKGMNLASNLFHIGILGIFAGHFFGMLTPHWMYEAWLPIEVKQKMAMFAGGASGVLCL
                     IGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCALGLLTIPFSAQHMDGSEMMKLV
                     GWAQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPFSRLVHIWSVPVEYLTRKY
                     QLVRARH"
     gene            complement(16336..16467)
                     /locus_tag="JN001_002569"
     ncRNA           complement(16336..16467)
                     /ncRNA_class="other"
                     /locus_tag="JN001_002569"
                     /product="RtT sRNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00391"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="rtT sRNA, processed from tyrT transcript; Derived
                     by automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00391"
BASE COUNT         3955 a         4134 c         4424 g         3998 t
ORIGIN      
        1 ttgcggctat tcttgaagtg tctggtttca agattagccc ccgttttgtt gtcaggtttt
       61 acctctcaac gtgcgggggt tttctctttc cagcaaccaa tgccaccagg gataaagccc
      121 ccgcaacatt gcgcctcacc ggataattcc ggcttggtgt ggatactacg tctcaattca
      181 tcttcacttc atccctgaaa tgtttgcaat aaagagtaca ttccggcttt tcaacagctg
      241 ttgcagtggt ttcgtgcagg ttgtggtaca ggctcgcaat tctgattaac gagctgtcca
      301 ggtagtatga agaaatacaa taagcaggaa tttatcttat ctcccccgat ttccgtcatc
      361 ggaggagata taactgtcag gcaaatatcg tcatcaaata ggcggcaaac agtgccagat
      421 gcgctgcgcc attgagcacg ttagtacgtc cggtggagaa ggagatatgg cacagcacta
      481 aagaggccac catcaccacc atttctggcg caccaagtgc aaactgtaat ttgttacccg
      541 tcataaaggc aattagcgtg acgacaggta cggtaagtga aatggttgct aacactgaac
      601 caaagaacag attcatcgcg cgctggacct ggttgttcaa cactgctttt aacgcaccta
      661 aaccttccgg cgacagaatc aacagagcca ccaggaagcc agtaaaggcg acaggggcat
      721 tcatgctgtc gagcaatgtc tccagcgggc tggcattcat tttggtgact gcaataacgg
      781 caatcagatg gataatcaac cagatagcat gccacacgct gctatgggca gacggtttac
      841 cgtgatgcgg gtcgtcgtca tcactgtcat cttcgtgctc gtagacaaac aaactttgat
      901 gcgttttggt ctggatcagc aaaaatacgc catacattgc cgcagaaatt aatgctacca
      961 gtaacgcctg accggttgaa aaattcgccg caggcagagc cattggaaat accagtacga
     1021 ttatcgccag ggggaacagc gcaattaaat actgcttgat accaaacaga ttcatatatt
     1081 gggtggcaaa cttacgaccg cccaacaata atgaaaagcc aaccagccca ccggtaacaa
     1141 tcataatgat tgaatagagc gtatcacgca ttagcgttgg cgcggcgtcg ccggttgcca
     1201 ttaaagctga aatcaaactg acttcaagaa taaccactga aaggctaaga ataagcgaac
     1261 cgtaaggttc tcccaagcga tgggctaata cgtccgcatg acggacaaca ctaaaggcgc
     1321 tacttaaaat accaataagc gcaagaagat tgatggcaat gaccactggt agtgtctggc
     1381 tgcttcccca caggaacagc actaccagcg ccagaaccgg gaaaataagc gaaatctcct
     1441 tgtggcgggt ttttaccgcc tcttgagcat ttgacattat ggttatccct ttgcagatga
     1501 atttatcgaa aatgtaaaaa ataggtagga aaaataacag aaagtgtctg gatatcggta
     1561 acattttacg aatttttacc ccactgtcga ttttttactc attgggacat aaaaataagt
     1621 attacgttta gacaatgttt gttttagcgt ttcttaagaa cagtctgaca tgaaaattct
     1681 tatgttttgg caagagtaga tattgttgac cacacttaat gttcaacttt gtaaaaggag
     1741 tcaacgatgc cgtataaaac gaaaagcgat ctgccggaaa gcgtaaagca cgttctaccg
     1801 tctcatgccc aggatatcta taaagaagcg ttcaacagcg catgggatca atataaagat
     1861 aaagacgatc ggcgtgatga cgccagtcgc gaagaaaccg cgcataaagt ggcctgggct
     1921 gctgtgaagc atgaatatgc caaaggggat gatgataaat ggcataaaaa atcgtaaaac
     1981 cggtagctta gttaaagcta ttcgtgcggt gttgccttgc aagtggtccg tggattgcat
     2041 attgtcccgt tagtggtttc aaaatgagca gtaaaaatgt ccggaagaca ccaaaaagtt
     2101 gtcgcaggga agtatgcagt ggcggaggtg taaggtgata acgcgtgatt tcttgatgaa
     2161 tgccgattgt aaaacggcat ttggtgccat tgaagaatca ctcttatggt cagcagagca
     2221 acgagcggct tcgctggcgg cgacgctggc ttgtcgacct gatgagggac cggtgtggat
     2281 cttcggttat ggatcgttga tgtggaatcc ggcactggag tttaccgagt cgtgcaccgg
     2341 tacactggtt ggatggcatc gcgcgttttg cctgcgcctg accgccgggc gcgggactgc
     2401 gcaccagccg ggacggatgc ttgcactgaa agagggcgga cgcactacag gcgtcgccta
     2461 tcgactgcca gaagagacgc tggagcagga actaaccctg ttgtggaagc gcgagatgat
     2521 taccggctgt tatctgccaa cctggtgtca gcttgatctt gatgatggat gcacagtaaa
     2581 cgccattgtg tttattatgg acccgcgaca tccagaatat gaatctgaca ctcgcgctca
     2641 ggtcatcgcg ccgttgattg cggcggcgag cggtccgctg ggaaccaacg cacaatacct
     2701 gttttcactg gaacaggagc ttatcaaact gggaatgcag gacgatgggc tgaatgattt
     2761 gctggtatcg gtaaaaaaac tgctggcgga gaattatccg gatggtgtgt tacggccggg
     2821 attcgcctga gtaaacttcc cgcatagtgg ggcgtcagac gccccctcaa acattaaaat
     2881 gtgagcactt tatcggctga cagcgtccat tgcgccagtt ccacaagagt accgatttcc
     2941 accccatcaa tcagaggaag tgtactaatc ccgcgcccgt cggtacaggt tttgcacaat
     3001 ttcaccggta cattctgagc ggtaaggatc tccagcattt gctgaatgtt gtagccttcc
     3061 cctggttttt gcccgcgcaa cccggctgtg accgcatcag acatgaggaa cagacgcaga
     3121 tccagattgc tctcctgctc tcgtaacgca atggccagcc gcaagctgtt aaacaaggat
     3181 tcgctcccgt aaggtgcgcc attggcaacg atcacgattt tttgcattat ttactcctgt
     3241 attcagggaa ttagacactc atcttctatc ttactgcttc tgcagcgtct gaccaatcgg
     3301 tcacattttt aaggattttc ctgaaagcgc gagaaaatac gacaaaagtt gccagtaatc
     3361 gttattcttt aaggctatgg ttttcattat taccggaagt taccgacgtt ttgagccgtt
     3421 tcgttcctcg cattatcccg ttttatttac tcttgcttgt agcaggcggt acagctaacg
     3481 cacaatctac cttcgagcaa aaagcggcaa atccctttga taataacaat gatggtctgc
     3541 cggatttagg catggctccc gaaaatcatg atggggaaaa acactttgct gaaattgtga
     3601 aagatttcgg cgaaaccagt atgaatgata acgggctgga tactggcgag caggcaaaag
     3661 ctttcgcatt gggaaaagtc cgcgacgcgc ttagtcaaca ggttaatcag cacgtagagt
     3721 cctggctatc accgtgggga aatgccagtg ttgacgtcaa agtggataac gaaggacatt
     3781 tcaccggcag tcgtggaagc tggtttgtgc cgttacaaga taatgatcgt tatttcacct
     3841 ggagccagct tggtcttact cagcaggata atgggttggt gagcaatgtg ggcgttgggc
     3901 aacgctgggc gcgcggcaac tggctggtgg gttataacac tttttatgac aacttgctgg
     3961 acgaaaatct tcagcgagcg ggctttggtg ccgaagcgtg gggcgaatat ttgcgattat
     4021 tggcaaactt ttatcagccg tttgctgcat ggcatgaaca gacagccacg caggaacaac
     4081 ggatggcgcg cgggtacgac ctgacagctc ggatgcgcat gccgttctat caacacctca
     4141 ataccagtgt cagcctagaa cagtattttg gtgatcgtgt tgatttgttt aactctggta
     4201 cgggttatca caatcccgtc gcgttgagtc tgggattaaa ttacacccct gtgccattag
     4261 tcactgtgac ggcccagcat aaacagggtg aaagtggcga gaatcaaaat aacctcgggc
     4321 tgaatcttaa ttaccgcttt ggtgtaccgc tcaaaaaaca actttctgcg ggcgaggttg
     4381 ccgaaagtca gtcgttacgt ggtagtcgct atgacaatcc gcagcgaaat aatctaccga
     4441 ctcttgagta ccgacagcga aaaacgttaa cggtgtttct ggcgacaccg ccgtgggatc
     4501 taaaacctgg cgaaacagtg ccgctgaaat tacaaatccg cagtcgttac ggtattcggc
     4561 aactgatttg gcagggcgat acgcagatat taagtttgac gccgggcgca caagccaaca
     4621 gcgcggaggg ctggacgctg atcatgcctg actggcagaa cggggaaggg gcaagcaatc
     4681 actggcgatt gtcggtggtg gtggaatata accaggggca gcgtgtctcc tccaatgaga
     4741 tcacgctaac gcttgtcgaa ccgttcgatg cattgtcaaa cgacgaactg cgctgggaac
     4801 cgtaatcaga aaatgcgctc ctgatgcacc cataccgctg cttccacgcg agacttgagc
     4861 ttcattttct tcagcatgtg cttgacgtgc acttttactg tgctttcggt gatatccagg
     4921 cggcgggcaa tcatcttgtt cggcaaaccc tgggcaatca gcttgagaat atcgcgctcg
     4981 cgtggggtta actggttaac atcgcgctca gtagtggcac ggttagcgcg caagctggcg
     5041 gccagaacag gcgttaatgc ttcgcttaat accatttcgc cagcagctgc ctgatgcaat
     5101 gctttcagca gatcttccgg ttccatatct tttaacagat aaccatccgc gccgcgtttc
     5161 agtgcggtga ccacatcttc ttcatggtta gagacgctga ataccacaat gcgccctgag
     5221 agggactttt cgcgcagttt atccagcgtt tccagaccgt tcatgccggg catattgaga
     5281 tctaacagga tcagatcggg atcaagagac tccgccagtt caataccctg ttcgccatta
     5341 ctcgcttcgc caaccacggt gatatctggt gccatactga taagctgttt tacgccagtt
     5401 cgcagcatcg ggtgatcgtc gatcagcagg atagtagccg gttcctgatt actcatgggt
     5461 atctccttgg acgtctgtga aagttttttc gggaataaag gtgaccacca cttcggtgcc
     5521 acctgattca cgacggcgga cgcggcaatc gcctcgtaaa ctttgcgcac ggtcgcgcat
     5581 tattatcatg ccgtagtgat tgctgcggat ggcattttca ggcacgccgc agccgttatc
     5641 ttggacggtc agtttgacct gattatcgtt ttgcgccacc gtcaccacga cctcactcgc
     5701 ttgcgaatgt ttgagggcgt tacttaatgc ctcacgggca atttgcaaca agtggattgc
     5761 ctgatgtgaa ggcaccagac gaggcggcaa ttgataatcc agcttcaccg ggaagccaaa
     5821 tttggcgctg tactcttcgc aactcgcctc cagcgccgga cgtaatccag gctcggtgag
     5881 ctgcaagcgg aatgtggtga gcaattcacg caactgcgcc caggatgcat tcagttcgtt
     5941 acggatctga cttaacagtt cgcggctgct tgctggcagc gcatcgccct gcatctgtaa
     6001 acaactcacc tgcatcttca tgcaagagag agattgggca atagaatcat gcagttcgcg
     6061 cgcaatggtg gcacgctctt ccatcacgat caactgttgc tgacgttcct gatggcgatc
     6121 cagcgccagc gtggcggtga gttgttcaac cagggtatcc accagttgtt gttgatcatg
     6181 gctaagatga cgcccctgcg gcagggtcgc cagcaaaata ccgtactgcg tatgagagtc
     6241 agccagccgc cacttcaggg ttgtgccgcg atcaccaacg ggtaatacgc cgcgcgggca
     6301 gagctggcag cctttatcat cacaagtcat atctggctgg caggtaaact cctgatgatt
     6361 ctcttcatca tcagtgtcat acacccgcag ttcgatatca cgtagcaggg ttaaattctg
     6421 taagccgttg agtacaggtg acaggcgttc acacagcggg gcgcgggaat gcaaacggcg
     6481 gttagcctgc cataaaaaag agaggatctg atttttatgc tccagcccgg cggttttctc
     6541 ctgaacccgc tgctcaagta cggcataact ttcggccagt tctgcagaca tattgttcaa
     6601 tgcagttcca agcatcgcca tttcgttgcg cccgctgatg ttcgcgcgtt gggtaaaatc
     6661 gcgatgactg acggcactcg ccattgccag cagttgccgc cacggttgta gcagtcgcgc
     6721 ccgcaaccag ataatagtga acaccagtaa aagtgccata aataccgcca ttacccgatg
     6781 gaccagtacc actgtctcaa tgcgcatttc cgtggtgcgg tcaaaaccag ataccagctg
     6841 atcaagcccg gcaacaaact ggctgacatc cgctgacacc gtttcgcggt tttgtgcacg
     6901 catcagtgca gggatcagtt cattacgcca gtaatcttgt aaaccctgta attgcgccag
     6961 ttgttcgtct cgttctgctg ctcgagttaa ctcggcgcta aatgccgttt gttccatctc
     7021 tttaattaag ggcttgtctt tctcacttaa tggcactgcc gccaacagac ggtaactttg
     7081 catgcgcagc gatcccgctt tgttgatcgc atgggcgctg ccctgaacgc cttgcaccag
     7141 ccagccagaa accgccatcc ctgccagtcc aatagcagta gaaagcaaca caataagcgc
     7201 aacctgatta accagggtga gcggagagag acaacgttta agcatgtaaa cctcttcctt
     7261 caggctttaa atgagcaata accttaatga atgtgacgat acattctgga atggcagtat
     7321 tctcggctat tggctgaagt atacccatac ccggaaagag ttactcctta tttgccgtgt
     7381 ggttagtcgc tttacatcgg taagggtagg gattttacag caccgtgaaa aatctcataa
     7441 tttttatgaa atcactgtac tcactatggg tattgataaa tatcaatgat agataaagtt
     7501 atcttatcgt ttgatttaca tcaaattgcc tttagctaca gacactaagg tggcagacat
     7561 cgaaacgagt atcagaggtg tctatgagtc actcatccgc ccccgaaagg gctactggag
     7621 ctgtcattac agattggcga ccggaagatc ctgcgttctg gcaacaacgc ggtcaacgta
     7681 ttgccagccg taacctgtgg atttccgttc cctgtctgct gctggcgttt tgcgtatgga
     7741 tgttgttcag cgctgttgcg gtgaacttac cgaaagtcgg ttttaatttt acgaccgatc
     7801 agctatttat gttgactgcg ctgccttcgg tttctggcgc gttattacgt gttccatact
     7861 cctttatggt tcctatcttc ggtggtcgtc gctggacggc gttcagcacc ggtattctga
     7921 ttattccttg cgtctggctg ggttttgccg tgcaggatac ctccacgcct tatagcgtct
     7981 tcatcatcat ctctctgcta tgcggctttg ctggcgcgaa cttcgcatcc agtatggcaa
     8041 acatcagctt cttctttccg aaacagaagc agggtggcgc gctgggtctg aatggtggtc
     8101 tgggaaacat gggcgtcagc gtcatgcagt tggttgctcc gctggtggta tcactgtcga
     8161 ttttcgcagt atttggtagc cagggcgtca aacagccgga tgggactgag ctgtatctgg
     8221 cgaatgcgtc ctggatatgg gtgccgttcc ttgccatctt caccattgcg gcgtggtttg
     8281 gcatgaacga tcttgctacc tcgaaagcct ccatcaagga gcagttgccg gtactcaaac
     8341 ggggtcatct gtggattatg agcctgctgt atctggcaac cttcggctcc ttcatcggct
     8401 tctccgcggg ctttgcaatg ctgtcaaaaa cgcagttccc ggatgttcag attctgcaat
     8461 acgctttctt cgggccgttt attggtgcgc tggcgcgttc tgcaggtggt gcattatctg
     8521 accgtctggg cggaactcgt gtcacgctgg tgaactttat tctgatggcg attttcagcg
     8581 gcctgctgtt cctgacctta ccgactgacg ggcagggcgg aagcttcatg gcgttcttcg
     8641 cggtcttcct ggcgctgttc ctgacagctg ggctgggtag tggttccact ttccagatga
     8701 tttcagtgat cttccgtaaa ctgacaatgg atcgcgtgaa agcagaaggg ggttctgacg
     8761 aacgtgcgat gcgtgaagcg gcaaccgaca cggcggcggc gctgggtttc atctctgcga
     8821 ttggcgcgat tggtggcttc tttatcccga aagcgtttgg tagctcgctg gcattaacgg
     8881 gttcgccagt cggcgcaatg aaggtatttt tgattttcta tatcgcctgc gtagtgatta
     8941 cctgggcggt atatggtcgg cattctaaaa aataaaccgt tactcgtcat actccgggtt
     9001 acatgtgctg cggctgcgtt cattcacccc agtcacttac tttagtaagc tcctgggatt
     9061 cattcacttg ccgccttcct gtaaaccgaa ttatatagag taaaatattt gattatcctt
     9121 tgcgcggcat gatgtcgcgc tttttttaag cgttatttag ttacaacata ctaatgttat
     9181 atggtttatt tcgccggatt tcattaagag ccattaatat gttccccatg gggaatactc
     9241 cttaataccc atctgcataa aaatcttaat agtttaaata actacaggta taaaacgtct
     9301 taatttacag tctgttatgt ggtggctgtt gattatccta aaggggtatc ttaggaattt
     9361 actttatttt tcatccccat cactcttgat cgttatcaat tcccacgctg tttcagagcg
     9421 ttaccttgcc cttaaacatt agcaatgtcg atttatcaga gggccgacag gctcccacag
     9481 gagaaaaccg atgagtaaat tcctggaccg gtttcgctac ttcaaacaga agggtgaaac
     9541 ctttgccgat gggcatggcc agcttctcaa taccaaccgt gactgggagg atggatatcg
     9601 ccagcgttgg cagcatgaca aaatcgtccg ctctacccac ggggtaaact gcaccggctc
     9661 ctgcagctgg aaaatctacg tcaaaaacgg tctggtcacc tgggaaaccc agcagactga
     9721 ctatccgcgt acccgtccgg atctgccaaa ccatgaacct cgcggctgcc cgcgcggtgc
     9781 cagctactcc tggtatcttt acagtgccaa ccgcctgaaa tacccgatga tgcgcaaacg
     9841 cctgatgaaa atgtggcgtg aagcgaaggc gctgcatagc gatccggttg aggcatgggc
     9901 ttctatcatt gaagacgccg ataaagcgaa aagctttaag caggcgcgtg gacgcggtgg
     9961 atttgttcgt tcttcctggc aggaggtgaa cgaactgatc gccgcatcta acgtttacac
    10021 catcaaaaac tacggcccgg accgtgttgc tggtttctcg ccaattccgg caatgtcgat
    10081 ggtttcttac gcatcgggtg cacgctatct ctcgctgatt ggcggtactt gcttaagctt
    10141 ctacgactgg tactgcgacc tgcctcctgc gtctccgcaa acctggggcg agcaaactga
    10201 cgtaccggaa tctgctgact ggtataactc cagctacatc atcgcctggg gttcaaacgt
    10261 gccgcagacg cgtaccccgg atgctcactt ctttactgaa gtgcgttaca aaggcaccaa
    10321 aactgttgcc gtcacaccag actacgctga aatcgccaaa ctgtgcgatc tgtggctggc
    10381 accgaaacag ggcaccgatg cggcaatggc gctggcgatg ggccacgtaa tgctgcgtga
    10441 attccacctc gacaacccaa gccagtattt caccgactat gtgcgtcgct acaccgacat
    10501 gccgatgctg gtgatgctgg aagaacgcga cggttactac gctgcaggtc gtatgctgcg
    10561 cgctgctgat ctggttgatg cgctgggcca ggaaaacaat ccggaatgga aaactgtcgc
    10621 ctttaatacc aatggcgaaa tggttgcgcc gaacggttct attggcttcc gctggggcga
    10681 gaagggcaaa tggaatcttg agcagcgcga cggcaaaact ggcgaagaaa ccgagctgca
    10741 actgagcctg ctgggtagcc aagatgagat cgctgaggta ggcttcccgt actttggtgg
    10801 cgacggcacg gaacacttca acaaagtgga actggaaaac gtgctgctgc acaaactgcc
    10861 ggtgaaacgc ctgcaactgg ctgatggcag caccgccctg gtgaccaccg tttatgatct
    10921 gacgctggca aactacggtc tggaacgtgg cctgaacgac gttaactgtg caaccagcta
    10981 tgacgatgtg aaagcttata ccccggcctg ggccgagcag attaccggcg tttctcgcag
    11041 ccagattatt cgcatcgccc gtgaatttgc cgataacgct gataaaacgc acggtcgttc
    11101 gatgattatc gtcggtgcgg ggctgaacca ctggtatcac ctcgatatga actatcgtgg
    11161 tctgatcaac atgctgattt tctgcggctg tgtcggtcag agcgggggcg gctgggcgca
    11221 ctatgtaggt caggaaaaac tgcgtccgca aaccggctgg cagccgctgg cgtttgccct
    11281 tgactggcag cgtccggcgc gtcacatgaa cagcacttct tatttctata accactccag
    11341 ccagtggcgt tatgaaaccg tcacggcgga agagttgctg tcaccgatgg cggacaaatc
    11401 ccgctatacc ggacacttga tcgactttaa cgtccgtgcg gaacgcatgg gctggctgcc
    11461 gtctgcaccg cagttaggca ctaacccgct gactatcgct ggcgaagcgg aaaaagccgg
    11521 gatgaatccg gtggactata cggtgaaatc cctgaaagag ggttccatcc gttttgcggc
    11581 agaacaacca gaaaacggta aaaaccaccc gcgcaacctg ttcatctggc gttctaacct
    11641 gctcggttct tccggtaaag gtcatgagtt tatgctcaag tacctgctgg ggacggagca
    11701 cggtatccag ggtaaagatc tggggcaaca gggcggcgtg aagccggaag aagtggactg
    11761 gcaggacaat ggtctggaag gcaagctgga tctggtggtt acgctggact tccgtctgtc
    11821 gagcacctgt ctctattccg acatcatttt gccgacggcg acctggtacg aaaaagacga
    11881 catgaatact tcggatatgc atccgtttat tcacccgctg tctgcggcgg tcgatccggc
    11941 ctgggaagcg aaaagcgact gggaaatcta caaagccatc gcgaagaaat tctccgaagt
    12001 gtgcgtcggc catctgggta aagaaaccga catcgtcacg ctgcctatcc agcatgactc
    12061 tgccgctgaa ctggcgcagc cgctggatgt gaaagactgg aaaaaaggcg agtgcgacct
    12121 gatcccaggt aaaaccgcgc cacacattat ggtcgtagag cgcgcttatc cggcgactta
    12181 cgaacgcttt acctctatcg gcccgctgat ggagaaaatc ggtaatggcg gtaaagggat
    12241 tgcctggaac acccagagcg agatggatct gctgcgtaag ctcaactaca ccaaagcgga
    12301 aggtccggcg aaaggccagc cgatgctgaa caccgcaatt gatgcggcag agatgatcct
    12361 gacactggca ccggaaacca acggtcaggt agccgtgaaa gcctgggctg ccctgagcga
    12421 atttaccggt cgtgaccata cgcatctggc gctgaataaa gaagacgaga agatccgctt
    12481 ccgcgatatt caggcacagc cgcgcaaaat tatctccagc ccgacctggt ctggtctgga
    12541 agatgaacac gtttcttaca acgccggtta caccaacgtt cacgagctga tcccatggcg
    12601 tacgctctct ggtcgtcagc aactgtatca ggatcaccag tggatgcgtg atttcggtga
    12661 aagcctgctg gtttatcgtc cgccgatcga cacccgttcg gtgaaagaag tgataggcca
    12721 gaaatccaac ggcaacccgg aaaaagcgct caacttcctg acgccgcacc agaagtgggg
    12781 gatccactcc acctacagcg acaaccagtt gatgctgacc ttaggtcgcg gtggcccggt
    12841 ggtctggctg agcgaagccg atgccaaaga gctgggcatt gccgataacg actggattga
    12901 agtttacaac agcaacggtg cgctgactgc ccgtgcggtt gtcagccagc gtgttccggc
    12961 agggatgacc atgatgtacc acgcgcagga acgtatcgtt aacctgccgg gttcggaaat
    13021 tactggccag cgtgggggga tccacaactc ggtcacccgt atcacgccga aaccgacgca
    13081 tatgattggt ggctatgccc atctggcata cggctttaac tactacggca ccgtaggttc
    13141 taaccgcgat gagtttgttg tagtgcgtaa gatgaagaac attgactggt tagatggcga
    13201 aggcaatgac taggtacagg agagcgtaaa atgaaaattc gttcacaagt cggcatggtg
    13261 ctgaatctcg ataagtgcat cggctgccac acctgttcag ttacctgtaa aaacgtctgg
    13321 accagccgtg aaggcgtgga gtacgcgtgg ttcaacaacg tggaaaccaa gccgggtcag
    13381 ggcttcccga ctgactggga aaaccaggaa aaatacaaag gcggctggat ccgtaaaatc
    13441 aacggcaaac tgcagccgcg catgggtaac cgtgccatgt tgctgggtaa aatcttcgct
    13501 aacccgcatc tgccggggat cgacgattat tacgagccgt tcgattttga ctatcagaac
    13561 ctgcataccg cgccggaagg cagcaaatcg cagccgattg cccgtccccg ttcgctgatt
    13621 accggggaac ggatggcgaa aatcgaaaaa gggccgaact gggaagatga cctgggtggt
    13681 gagtttgaca aactggcgaa agacaagaac ttcgacaaca tccagaaggc gatgtatagc
    13741 cagttcgaaa acacctttat gatgtatttg ccgcgcctgt gcgaacactg cctgaacccg
    13801 gcatgtgtgg cgacctgccc gagcggtgcg atttacaagc gtgaagaaga tggcatcgtc
    13861 ctgatcgacc aggataaatg ccgtggctgg cgtatgtgca tcaccggatg cccgtacaaa
    13921 aaaatctact tcaactggaa gagcggtaag tctgagaagt gcatcttctg ctatccgcgt
    13981 attgaagcgg gtcagccgac cgtgtgctca gaaacctgtg tcggtcgtat ccgttatctt
    14041 ggcgtgctgc tgtacgatgc cgacgcgatt gaacgtgcag ccagcaccga gaacgagaaa
    14101 gatctttacc agcgtcagct ggaggtgttc ctcgatccga acgatccgaa agtcatcgag
    14161 caggcgatta aagacggtat tccgctgagc gttattgaag ccgcacagca gtcgccggtt
    14221 tataaaatgg caatggaatg gaaactggcg ctgccgctgc atccagaata tcgcacactg
    14281 ccgatggtct ggtacgtgcc gcctctgtct ccgattcagt ctgcagcaga cgcgggtgag
    14341 ctgggtagca acggcattct gccagacgtc gaaagcttgc gtattccggt acagtatctg
    14401 gcgaatctgc tgaccgccgg tgataccaaa ccggtactgc gcgcactgaa acgtatgctg
    14461 gcgatgcgtc attacaaacg tgctgaaacc gttgacggta aagttgatac ccgtgcgctg
    14521 gaagaggtcg gtctgaccga agcccaggca caggagatgt accgttatct ggctattgct
    14581 aactacgaag atcgctttgt ggtgccgagt agtcatcgtg aactggcacg ggaagccttc
    14641 ccggagaaaa atggctgcgg ctttaccttt ggtgatggct gccacggctc agataccaaa
    14701 ttcaatctgt tcaacagccg tcgtatcgat gccatcgatg tgaccagcaa aacggagccg
    14761 catccatgat cgaactcgtg attgtatcgc gtctccttga atatccggat gctgccttat
    14821 ggcagcatca acaagagatg tttgaggtga ttgctgcgtc gaaaaatctg tcgaaagaag
    14881 atgcccatgc gctgggcatt ttcctgcgcg atttaacggc gatggatccg ctcgatgccc
    14941 aggcccagta cagcgaactg ttcgaccgtg gccgcgccac gtcactgttg ctatttgaac
    15001 atgttcacgg tgaatcccgt gaccgcggcc aggcgatggt ggacctgctg gcgcagtacg
    15061 agcagcacgg cttgcagtta aacagccgcg aattaccgga ccatctgccg ctgtatctgg
    15121 agtacctgtc gcagctgccg caaagcgaag ccgtggaagg tttgaaagat atcgcgccga
    15181 ttctggcatt gctgagcgcg cgtctgcaac agcgtgaaag ccgttatgcc gtgatgtttg
    15241 atctgctgct gaaattggcc aataccgcta tcgacagcga caaagtggcg gaaaaaattg
    15301 ccgacgaagc gcgcgatgat acgccgcagg cgctggatgc tgtctgggaa gaagagcagg
    15361 ttaaattctt tgctgacaaa ggctgcggtg attcagcaat cactgctcat cagcgtcgct
    15421 ttgccggtgc cgtcgcgccg caatatctga atatcaccac cggaggacag cactaatgca
    15481 attcctgaat atgttcttct ttgatatcta cccgtacata gccggggcgg tcttcctgat
    15541 tggtagctgg ctgcgttatg actacgggca gtacacctgg cgcgcggcgt ccagccagat
    15601 gctggatcgc aaagggatga acctggcgtc gaacctgttc catatcggta ttctggggat
    15661 ttttgctggt cacttcttcg gtatgctgac gccgcactgg atgtatgaag cctggctgcc
    15721 gattgaagtg aaacagaaaa tggcgatgtt tgctggtggt gccagcggcg tgctgtgtct
    15781 gattggcggc gtgctgttgc tgaagcgtcg tctgttcagc ccacgcgtgc gtgcaaccac
    15841 taccggagcg gatatcctga tcctgtcgct gctcgttatc cagtgcgcgc tgggcctgtt
    15901 gaccattccg ttctccgctc agcatatgga cggtagcgag atgatgaaac tggttggctg
    15961 ggcgcagtcg gtggtgacct tccacggtgg cgcttctcaa cacctcgatg gtgtggcgtt
    16021 tatcttccgt ctgcacctgg tgctggggat gacgttattc ctgctgttcc cgttctcgcg
    16081 tctggtacac atctggagcg taccggtgga gtatctgaca cgtaagtacc agctggtgcg
    16141 cgctcgtcac taaacgaatt ttagttcaca tagaccctgc ttcggcgggg ttttttatgg
    16201 gcacggtgcg gggtgagttg tcggatgcgc ttcgcttatc cgacctacag gggaggatat
    16261 tgtaggcccg gtaaacgtgg tgccatcggg caaaattagc tcggagtaac aggttttgat
    16321 tattcaagga agcgatggtg gtgggggaag gattactcag cgctgcgcgc ttcgcccttc
    16381 gggtcgttgc ctgcggcaac gctctctcgc tggcgctcaa gtcgaacctt ggtcgaagct
    16441 tctcatcctt ccccgcttgg gcagaatatt taattgcgga ttcgtttgag agtttacgga
    16501 cttttgaaaa g
//
LOCUS       DADMJE010000091        16472 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.092, whole genome shotgun sequence.
ACCESSION   DADMJE010000091 DADMJE010000000
VERSION     DADMJE010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16472
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.092"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JN001_002570"
     CDS             complement(118..1401)
                     /gene="gltA"
                     /locus_tag="JN001_002570"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate (Si)-synthase"
                     /protein_id="HAY9053760.1"
                     /translation="MADTKAKLTLNGDTAVELDVLKGTLGQDVIDIRTLGSKGVFTFD
                     PGFTSTASCESKITFIDGDEGILLHRGFPIDQLATDSNYLEVCYILLNGEKPTQEQYD
                     EFKTTVTRHTMIHEQITRLFHAFRRDSHPMAVMCGITGALAAFYHDSLDVNNPRHREI
                     AAFRLLSKMPTMAAMCYKYSIGQPFVYPRNDLSYAGNFLNMMFSTPCEPYEVNPILER
                     AMDRILILHADHEQNASTSTVRTAGSSGANPFACIAAGIASLWGPAHGGANEAALKML
                     EEISSVKHIPEFVRRAKDKNDSFRLMGFGHRVYKNYDPRATVMRETCHEVLKELGTKD
                     DLLEVAMELENIALNDPYFIEKKLYPNVDFYSGIILKAMGIPSSMFTVIFAMARTVGW
                     IAHWSEMHSDGMKIARPRQLYTGYEKRDFKSDIKR"
     gene            complement(1607..1714)
                     /locus_tag="JN001_002571"
     CDS             complement(1607..1714)
                     /locus_tag="JN001_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053761.1"
                     /translation="MRKSYEVGISPKINLCNSVEVLTNSFGTVISGRQV"
     gene            2095..2499
                     /gene="sdhC"
                     /locus_tag="JN001_002572"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
     CDS             2095..2499
                     /gene="sdhC"
                     /locus_tag="JN001_002572"
                     /gene_synonym="cybA"
                     /gene_synonym="dhsC"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000263334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY9053762.1"
                     /translation="MWALFMIRNVKKQRPVNLDLQTIRFPITAIASILHRVSGVITFV
                     AVGILLWLLGTSLSSPEGFEQASAIMGSFFVKFIMWGILTALAYHVVVGIRHMMMDFG
                     YLEETFEAGKRSAKISFVITVVLSLLAGVLVW"
     gene            2493..2840
                     /gene="sdhD"
                     /locus_tag="JN001_002573"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
     CDS             2493..2840
                     /gene="sdhD"
                     /locus_tag="JN001_002573"
                     /gene_synonym="cybS"
                     /gene_synonym="dhsD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase membrane anchor subunit"
                     /protein_id="HAY9053763.1"
                     /translation="MVSNASALGRNGVHDFILVRATAIVLTLYIIYMVGFFATSGELT
                     YEVWIGFFASAFTKVFTLLALFSILIHAWIGMWQVLTDYVKPLALRLMLQLVIVVALV
                     VYVIYGFVVVWGV"
     gene            2840..4606
                     /gene="sdhA"
                     /locus_tag="JN001_002574"
     CDS             2840..4606
                     /gene="sdhA"
                     /locus_tag="JN001_002574"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005122549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HAY9053764.1"
                     /translation="MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRS
                     HTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQDAIEYMCKTGPEAILELEHM
                     GLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTTI
                     FSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRIYQSTTNAHIN
                     TGDGVGMAIRAGVPVQDMEMWQFHPTGIAGAGVLVTEGCRGEGGYLLNKHGERFMERY
                     APNAKDLAGRDVVARSIMIEIREGRGCDGPWGPHAKLKLDHLGKEVLESRLPGILELS
                     RTFAHVDPVKEPIPVIPTCHYMMGGIPTKVTGQALTVNEKGEDVVVPGLFAVGEIACV
                     SVHGANRLGGNSLLDLVVFGRAAGLHLQESIAEQGALRDASESDVEASLDRLNRWNNN
                     RNGEDPVAIRKALQECMQHNFSVFREGDAMAKGLEQLKVIRERLKNARLDDTSSEFNT
                     QRVECLELDNLMETAYATAVSANFRTESRGAHSRFDFPDRDDENWLCHSLYLPESESM
                     TRRSVNMEPKLRPAFPPKIRTY"
     gene            4622..5338
                     /locus_tag="JN001_002575"
     CDS             4622..5338
                     /locus_tag="JN001_002575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HAY9053765.1"
                     /translation="MRLEFSIYRYNPDVDDAPRMQDYTLEAEEGRDMMLLDALIQLKE
                     KDPSLSFRRSCREGVCGSDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRD
                     LVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCP
                     SFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAFSVFRCHSIMNCVSVCPK
                     GLNPTRAIGHIKSMLLQRNA"
     gene            5639..8440
                     /gene="sucA"
                     /locus_tag="JN001_002576"
     CDS             5639..8440
                     /gene="sucA"
                     /locus_tag="JN001_002576"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HAY9053766.1"
                     /translation="MQNSALKAWLDSSYLSGANQSWIEQLYEDFLTDPDSVDANWRST
                     FQQLPGTGVKPDQFHSQTREYFRRLAKDASRYSSTISDPDTNVKQVKVLQLINAYRFR
                     GHQHANLDPLGLWQQDKVADLDPSFHDLTEADFQETFNVGSFASGKETMKLGELLEAL
                     KQTYCGPIGAEYMHITSTEEKRWIQQRIESGRATFNSEEKKRFLSELTAAEGLERYLG
                     AKFPGAKRFSLEGGDALIPMLKEMIRHAGNSGTREVVLGMAHRGRLNVLVNVLGKKPQ
                     DLFDEFAGKHKEHLGTGDVKYHMGFSSDFQTDGGLVHLALAFNPSHLEIVSPVVIGSV
                     RARLDRLDEPSSNKVLPITIHGDAAVTGQGVVQETLNMSKARGYEVGGTVRIVINNQV
                     GFTTSNPLDARSTPYCTDIGKMVQAPIFHVNADDPEAVAFVTRLALDFRNTFKRDVFI
                     DLVCYRRHGHNEADEPSATQPLMYQKIKKHPTPRKIYADKLEQEKVATLEDATEMVNL
                     YRDALDAGDCVVAEWRPMNMHSFTWSPYLNHEWDEEYPNKVEMKRLQELAKRISTVPE
                     AVEMQSRVAKIYSDRQAMAAGEKLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFF
                     HRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFEYGYATAEPRTLTIW
                     EAQFGDFANGAQVVIDQFISSGEQKWGRMCGLVMLLPHGYEGQGPEHSSARLERYLQL
                     CAEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGT
                     FLPAIGEIDELDPKGVKRVVMCSGKVYYDLLEQRRKNNQHDVAIVRIEQLYPFPHKAM
                     QEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIPFGASLRYAGRPASASPAVGY
                     MSVHQKQQQDLVNDALNVE"
     gene            8455..9672
                     /gene="odhB"
                     /locus_tag="JN001_002577"
     CDS             8455..9672
                     /gene="odhB"
                     /locus_tag="JN001_002577"
                     /EC_number="2.3.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase complex
                     dihydrolipoyllysine-residue succinyltransferase"
                     /protein_id="HAY9053767.1"
                     /translation="MSSVDILVPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDK
                     VVLEVPASADGILDAVLEDEGTTVTSRQILGRLREGNSAGKETSAKSEEKASTPAQRQ
                     QASLEEQNNDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHLAKSPAKESAP
                     AAAAPAAQPALAARSEKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRK
                     QYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNASIDGDDVVYHNYFDVSMAVSTP
                     RGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS
                     TPIINPPQSAILGMHAIKDRPMAVNGQVEILPMMYLALSYDHRLIDGRESVGFLITIK
                     ELLEDPTRLLLDV"
     gene            9948..11114
                     /gene="sucC"
                     /locus_tag="JN001_002578"
     CDS             9948..11114
                     /gene="sucC"
                     /locus_tag="JN001_002578"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HAY9053768.1"
                     /translation="MNLHEYQAKQLFARYGLPAPVGYACTTPREAEEAASKIGAGPWV
                     VKCQVHAGGRGKAGGVKVVNSKEDIRAFAENWLGKRLVTYQTDANGQPVNQILVEAAT
                     DIAKELYLGAVVDRSSRRVVFMASTEGGVEIEKVAEETPQLIHKVALDPLTGPMPYQG
                     RELAFKLGLEGKLVQQFTKIFMGLATIFLERDLALIEINPLVITKQGDLICLDGKLGA
                     DGNALFRQLDLREMRDQSQEDPREAQAAQWELNYVALDGNIGCMVNGAGLAMGTMDIV
                     KLHGGEPANFLDVGGGATKERVTEAFKIILSDDKVKVVLVNIFGGIVRCDLIADGIIG
                     AVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQVVAAVEGK"
     gene            11114..11983
                     /gene="sucD"
                     /locus_tag="JN001_002579"
     CDS             11114..11983
                     /gene="sucD"
                     /locus_tag="JN001_002579"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HAY9053769.1"
                     /translation="MSILIDKNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG
                     GTTHLGLPVFNTVREAVAATGATASVIYVPAPFCKDSILEAIDAGIKLIITITEGIPT
                     LDMLTVKVKLDEAGVRMIGPNCPGVITPGECKIGIQPGHIHKPGKVGIVSRSGTLTYE
                     AVKQTTDYGFGQSTCVGIGGDPIPGSNFIDILEMFEKDPQTEAIVMIGEIGGSAEEEA
                     AAYIKEHVTKPVVGYIAGVTAPKGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRS
                     LADIGEALKTVLK"
     gene            complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JN001_002580"
     CDS             complement(12087..12809)
                     /gene="mngR"
                     /locus_tag="JN001_002580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosyl-D-glycerate transport/metabolism system
                     transcriptional repressor MngR"
                     /protein_id="HAY9053770.1"
                     /translation="MGHKPLYRQIADRIREQIARGELKPGDALPTESALQTEFGVSRV
                     TVRQALRQLVEQQILESIQGSGTYVKEERVNYDIFQLTSFDEKLSDRHVDTHSEVLIF
                     EVIPADDFLQQQLQITAQDRVWHVKRVRYRKQKPMALEETWMPLALFPDLTWQVMENS
                     KYHFIEEVKKMVIDRSEQEIIPLMPTEEMSRLLNISQTKPILEKVSRGYLVDGRVFEY
                     SRNAFNTDDYKFTLIAQRKSSR"
     gene            12918..14894
                     /gene="mngA"
                     /locus_tag="JN001_002581"
     CDS             12918..14894
                     /gene="mngA"
                     /locus_tag="JN001_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS 2-O-a-mannosyl-D-glycerate transporter
                     subunit IIABC"
                     /protein_id="HAY9053771.1"
                     /translation="MVLFYRAHWRDYKNDQVRIMMNLTTLTHRDALRLNARFTSREEA
                     IHALTQRLAALGKISSTEQFLEEVYRRESLGPTALGEGLAVPHGKTAAVKEAAFAVAT
                     LSEPLQWEGVDGPEAVDLVVLLAIPPNEAGTMHMQLLTALTTRLADDEIRARIQSATT
                     PDELLSALDDKGGTQPSASFSNAPTIVCVPACPAGIAHTYMAAEYLEKAGRKLGVNVY
                     VEKQGANGIEGRLTADQLNSATACIFAAEVAIKESERFNGIPALSVPVAEPIRHAEAL
                     IQQALTLKRSDETRTVQQDTQPVKSVKTELKQALLSGISFAVPLIVAGGTVLAVAVLL
                     SQIFGLQDLFNEENSWLWMYRKLGGGLLGILMVPVLAAYTAYSLADKPALAPGFAAGL
                     AANMIGSGFLGAVVGGLIAGYLMRWVKNHLRLSSKFNGFLTFYLYPVLGTLGAGSLML
                     FVVGEPVAWINNSLTAWLNGLSGSNALLLGAIFGFMCSFDLGGPVNKAAYAFCLGAMV
                     NGVYGPYAIFASVKMVSAFTVTASTMLAPRLFKEFEIETGKSTWLLGLVGITEGAIPM
                     AIEDPLRVIGSFVLGSMVTGAIVGAMNIGLSTPGAGIFSLFLLHDNGAGGVMAAIGWF
                     GAALVGAAISTAILLIWRRHAVKHGNYLTDGVMP"
     gene            14912..>16472
                     /locus_tag="JN001_002582"
     CDS             14912..>16472
                     /locus_tag="JN001_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY9053772.1"
                     /translation="MKAVSRVHITPHMHWDREWYFTTEESRILLVNNMEEILCRLEQD
                     NEYKYYVLDGQTAILEDYFAVKPENKDRVKKQVEAGKLIIGPWYTQTDTTIVSAESIV
                     RNLMYGMRDCLAFGEPMKIGYLPDSFGMSGQLPHIYNGFGITRTMFWRGCSERHGTDK
                     TEFLWQSSDGSEVTAQVLPLGYAIGKYLPTDENGLRKRLDSYFDVLEKASVTKEILLP
                     NGHDQMPLQQNIFEVMDKLREIYPQRKFVMSRFEEVFEKIEAQRESLATLKGEFIDGK
                     YMRVHRTIGSTRMDIKIAHARIENKIVNLLEPLATLAWTLGFEYHHGLLEKMWKEILK
                     NHAHDSIGCCCSDKVHREIVARFELAEDMADNLLRFYMRKIADNMPQSDADKLVLFNL
                     MPWPREEVINTTVRLRASQFNLRDDRGQPVPYFIRHAREIDPGLIDRQIVHYGNYDPF
                     MEFDIQINQIVPSMGYRTLYIEANQPGNVIAAKSDAEGILENAFWQIALNEDGSLQLV
                     DKDSGVRYDRVL"
BASE COUNT         3954 a         4134 c         4486 g         3898 t
ORIGIN      
        1 aatatatgaa tgtccgatag tggattttat ttttacaatt ttttgtgttt aggcatataa
       61 aaattaaccc gccatttgaa cggcgggtta aaatatttac aacttagcaa tcaaccatta
      121 acgcttgata tcgcttttaa agtcgcgttt ttcatatcct gtatacagct gacgcggacg
      181 ggcaatcttc ataccgtcac tgtgcatttc gctccagtgg gcgatccagc caacggtacg
      241 tgccattgcg aaaatgacgg tgaacatgga agacggaata cccatcgctt tcaggatgat
      301 accagagtag aaatcgacgt tcgggtacag tttcttctcg ataaagtacg ggtcgttcag
      361 cgcgatgttt tccagctcca tagccacttc cagcaggtca tctttggtgc ccagctcttt
      421 cagaacttca tggcaggttt cacgcattac ggtggcgcgc gggtcgtaat ttttgtacac
      481 gcggtgaccg aagcccatca ggcggaaaga atcattttta tctttcgcac gacgaacaaa
      541 ttccggaatg tgtttaacgg agctaatttc ttccagcatt ttcagcgccg cttcgttagc
      601 accaccgtgc gcaggtcccc acagtgaagc aatacctgct gcgatacagg caaacgggtt
      661 cgcacccgaa gagccagcgg tacgcacggt ggaggtagag gcgttctgtt catggtcagc
      721 gtgcaggatc agaatacggt ccatagcacg ttccagaatc ggattaactt catacggttc
      781 gcacggcgtg gagaacatca tattcaggaa gttaccggca taggagagat cgttgcgcgg
      841 ataaacaaat ggctgaccaa tggaatactt gtaacacatc gcggccatgg tcggcatttt
      901 cgacagcagg cggaacgcgg caatttcacg atgacgagga ttgttaacat ccagcgagtc
      961 gtgatagaac gccgccagcg cgccggtaat accacacatg actgccattg gatgtgagtc
     1021 gcgacggaaa gcgtggaaca gacgggtaat ctgctcgtgg atcatggtat gacgggtcac
     1081 cgtagtttta aattcgtcat actgttcctg agtcggtttt tcaccattca gcaggatgta
     1141 acaaacttcc aggtagttag aatcggtcgc cagctgatcg atcgggaaac cgcggtgcag
     1201 caaaatacct tcatcaccat caataaaagt aattttagat tcgcaggatg cggttgaagt
     1261 gaagcctggg tcaaaggtga acacaccttt tgaaccgaga gtacggatat caataacatc
     1321 ttgacccagc gtgcctttca gcacatccag ttcaacagct gtgtccccgt tgagggtgag
     1381 ttttgctttt gtatcagcca tttaaggtct ccttagcgcc ttattgcgta agactgccgg
     1441 aacttaaatt tgccttcgca catcaacctg gctttacccg tttgttattt ggctcgccgc
     1501 tctgtgaaag aggggaaaac ctgggtacag agctctgggc gcttgcaggt aaaggatcca
     1561 ttgatgacga ataaatggcg aatcaagtac ttagcaatcc gaattattaa acttgtctac
     1621 cactaataac tgtcccgaat gaattggtca atacttccac actgttacat aagttaatct
     1681 taggtgaaat accgacttca taacttttac gcattatatg cttttcctgg taatgtttgt
     1741 aacaactttg ttgagtgatt gtcaaattag atgattaaaa attaaataaa tgttgttgtc
     1801 gtgacctgga tcactgttca ggataaaacc cgacaaacta tatgtaggtt aattgtaatg
     1861 attttgtgaa cagcctatac tgccgccagg tctccggaac accctgcaat cccgagccac
     1921 ccagcgttgt aacgtgtcgt tttcgcatct ggaagcagtg ttttgcatga cgcgcagtta
     1981 tagaaaggac gctgtctgac ccgcaagcag accggaggaa ggaaatcccg acgtctccag
     2041 gtaacagaaa gttaacctct gtgcccgtag tccccaggga ataataagaa cagcatgtgg
     2101 gcgttattca tgataagaaa tgtgaaaaaa caaagacctg ttaatctgga cctacagacc
     2161 atccggttcc ccatcacggc gatagcgtcc attctccatc gcgtttccgg tgtgatcacc
     2221 tttgttgcag tgggcatcct gctgtggctt ctgggtacca gcctctcttc ccctgaaggt
     2281 ttcgagcaag cttccgcgat tatgggcagc ttcttcgtca aatttatcat gtggggcatc
     2341 cttaccgctc tggcgtatca cgtcgtcgta ggtattcgcc acatgatgat ggattttggc
     2401 tatctggaag aaacattcga agcgggtaaa cgctccgcca aaatctcctt tgttattact
     2461 gtcgtgcttt cacttctcgc aggagtcctc gtatggtaag caacgcctcc gcattaggac
     2521 gcaatggcgt acatgatttc atcctcgttc gcgctaccgc tatcgtcctg acgctctaca
     2581 tcatttatat ggtcggtttt ttcgccacca gtggcgaact gacatatgaa gtctggatcg
     2641 gtttcttcgc ctctgcgttc accaaagtgt tcaccctgct ggcgctgttt tctatcttga
     2701 ttcatgcctg gatcggcatg tggcaggtgt tgaccgacta cgttaaaccg ctggcattgc
     2761 gcctgatgct gcaactggtg attgtcgttg cactggtggt ttacgtgatt tatggattcg
     2821 ttgtggtgtg gggtgtgtga tgaaattgcc agtcagagaa tttgatgcag ttgtgattgg
     2881 tgccggtggc gcaggtatgc gcgcggcgct gcaaatttcc cagagcggcc agacctgtgc
     2941 gctgctctct aaagtcttcc cgacccgttc ccataccgtt tctgcgcaag gcggcattac
     3001 cgttgcgctg ggtaataccc atgaagataa ctgggaatgg catatgtacg acaccgtaaa
     3061 agggtcggac tatatcggtg accaggacgc gattgaatat atgtgtaaaa ccgggccgga
     3121 agcgattctg gaactcgaac acatgggcct gccgttctcg cgtcttgatg atggtcgtat
     3181 ctatcaacgt ccgtttggcg gtcagtcgaa aaacttcggc ggcgagcagg cggcacgcac
     3241 tgcggcggcg gctgaccgta ccggtcacgc actgttgcac acgctttatc agcagaacct
     3301 gaaaaaccac accaccattt tctccgagtg gtatgcgctg gatctggtga agaaccagga
     3361 tggcgcggtg gtgggttgta ctgcactgtg catcgaaact ggtgaagtgg tttatttcaa
     3421 agcccgcgct accgtgctgg cgactggcgg ggcagggcgt atttatcagt ccaccactaa
     3481 cgcccacatt aacactggcg acggcgtcgg catggctatc cgcgcaggcg taccggtgca
     3541 ggatatggaa atgtggcagt tccacccgac cggtattgcc ggtgcgggcg tactggtcac
     3601 cgaaggttgc cgtggtgaag gcggttatct gctgaacaaa catggcgaac gctttatgga
     3661 gcgttatgcg ccgaacgcca aagacctggc gggccgtgat gtggtggcgc gttccatcat
     3721 gatcgaaatc cgtgaaggtc gcggctgtga tggtccgtgg gggccacacg cgaaactgaa
     3781 actcgaccac ctgggtaaag aagttctcga atcccgtctg ccgggcatcc tggaactctc
     3841 ccgtaccttc gctcacgtcg atccggtgaa agagccgatc ccggttatcc caacctgtca
     3901 ttacatgatg ggcggtattc cgaccaaagt gaccggtcag gcgctgactg tgaatgagaa
     3961 aggcgaagat gtggttgttc cgggactgtt tgccgttggt gaaatcgctt gtgtatcggt
     4021 acacggcgct aaccgtctgg gcggcaactc gctgctggac ctggtggtct ttggtcgtgc
     4081 ggcaggtctg catctgcaag agtctatcgc cgagcagggc gcattgcgcg atgccagcga
     4141 gtctgatgtt gaagcatctc tggatcgtct gaaccgctgg aacaataatc gtaacggtga
     4201 agatccggtg gcgattcgta aagcgctgca agaatgtatg cagcataact tctcggtctt
     4261 ccgtgaaggt gatgcgatgg cgaaagggct tgagcagttg aaagttatcc gcgagcgtct
     4321 gaaaaatgcc cgtctggatg acacttccag cgagttcaac acccagcgcg ttgagtgcct
     4381 ggaactggat aacctgatgg aaacggcgta tgcaacggct gtttctgcca acttccgtac
     4441 cgaaagccgt ggcgcgcata gccgcttcga cttcccggat cgtgatgatg aaaactggct
     4501 gtgccactcc ctgtatctgc cagagtcgga atccatgacg cgccgaagcg tcaacatgga
     4561 accgaaactg cgcccggcat tcccgccgaa gattcgtact tactaatgcg gagacaggaa
     4621 aatgagactc gagttttcaa tttatcgcta taacccggat gttgatgatg ctccgcgtat
     4681 gcaggattac accctggaag cggaagaagg tcgcgacatg atgctgctgg atgcgcttat
     4741 ccagctgaaa gagaaagatc ccagcctgtc gttccgccgc tcctgtcgtg aaggtgtgtg
     4801 cggttccgac ggtctgaaca tgaacggcaa gaatggtctg gcctgtatta ccccgatttc
     4861 ggcactcaac cagccgggca agaagattgt gattcgcccg ctgccaggtt taccggtgat
     4921 ccgcgatttg gtggtagaca tgggacaatt ctatgcgcaa tatgagaaaa ttaagcctta
     4981 cctgttgaat aatggacaaa atccgccagc tcgcgagcat ttacagatgc cagagcagcg
     5041 cgaaaaactc gacgggctgt atgaatgtat tctctgcgca tgttgttcaa cctcttgtcc
     5101 gtctttctgg tggaatcccg ataagtttat cggcccggca ggcttgttag cggcatatcg
     5161 tttcctgatc gatagccgtg ataccgagac tgacagccgc ctcgacggtt tgagcgatgc
     5221 attcagcgta ttccgctgtc acagcatcat gaactgcgtc agtgtatgtc cgaaggggct
     5281 gaacccgacg cgcgccatcg gccatatcaa gtcgatgttg ttgcaacgta atgcgtaaac
     5341 cgtaggcctg ataagacgcg caagcgtcgc atcaggcaac cagtgccgga tgcggcgtga
     5401 acgccttatc cggcctacaa gtcattaccc gtaggcctga taagcgcagc gcatcaggcg
     5461 taacaaagaa atgcaggaaa tctttaaaaa ctgcccctga cactaagaca gtttttaaag
     5521 gttccttcgc gagccactac gtagacaaga gctcgcaagt gaaccccggc acgcacatca
     5581 ctgtgcgtgg tagtatccac ggcgaagtaa gcataaaaaa gatgcttaag ggatcacgat
     5641 gcagaacagc gctttgaaag cctggttgga ctcttcttac ctctctggcg caaaccagag
     5701 ctggatagaa cagctctatg aagacttctt aaccgatcct gactcggttg acgctaactg
     5761 gcgttcgacg ttccagcagt tacctggtac gggagtcaaa ccggatcaat tccactctca
     5821 aacgcgtgaa tatttccgcc gcctggcgaa agacgcttca cgttactctt caacgatctc
     5881 cgaccctgac accaatgtga agcaggttaa agtcctgcag ctcattaacg cataccgctt
     5941 ccgtggtcac cagcatgcga atctcgatcc gctgggactg tggcagcaag ataaagtggc
     6001 cgatctggat ccgtctttcc acgatctgac cgaagcagac ttccaggaaa ccttcaacgt
     6061 cggttcattt gccagcggca aagaaaccat gaaactcggc gagctgctgg aagccctcaa
     6121 gcaaacctac tgcggcccga ttggtgccga gtatatgcac atcaccagca ccgaagaaaa
     6181 acgctggatc caacagcgta tcgagtctgg tcgcgcgact ttcaatagcg aagagaaaaa
     6241 acgcttctta agcgaactga ccgccgctga aggccttgaa cgttacctcg gcgcaaaatt
     6301 ccctggcgca aaacgcttct cgctggaagg cggtgacgcg ttaatcccga tgcttaaaga
     6361 gatgatccgc cacgctggca acagcggcac ccgcgaagtg gttctcggga tggcgcaccg
     6421 tggtcgtctg aacgtgctgg tgaacgtgct gggtaaaaaa ccgcaagact tgttcgacga
     6481 gttcgccggt aaacataaag aacacctcgg cacgggtgac gtgaaatacc acatgggctt
     6541 ctcgtctgac ttccagaccg atggcggcct ggtgcacctg gcgctggcgt ttaacccgtc
     6601 tcaccttgag attgtaagcc cggtagttat cggttctgtt cgtgcccgtc tggacagact
     6661 tgatgagccg agcagcaaca aagtgctgcc aatcaccatc cacggtgacg ccgcagtgac
     6721 cgggcagggc gtggttcagg aaaccctgaa catgtcgaaa gcgcgtggtt atgaagttgg
     6781 cggtacggta cgtatcgtta tcaacaacca ggttggtttc accacctcta atccgctgga
     6841 tgcccgttct acgccgtact gtactgatat cggtaagatg gttcaggccc cgattttcca
     6901 cgttaacgcg gacgatccgg aagccgttgc ctttgtgacc cgtctggcgc tcgatttccg
     6961 taacaccttt aaacgtgatg tcttcatcga cctggtgtgc taccgccgtc acggccacaa
     7021 cgaagccgac gagccgagcg caacccagcc gctgatgtat cagaaaatca aaaaacatcc
     7081 gacaccgcgc aaaatctacg ctgacaagct ggagcaggaa aaagtggcga cgctggaaga
     7141 tgccaccgag atggttaacc tgtaccgcga tgcgctggat gctggcgatt gcgtagtggc
     7201 agagtggcgt ccgatgaaca tgcactcttt cacctggtcg ccgtacctca accacgaatg
     7261 ggacgaagag tacccgaaca aagttgagat gaagcgcctg caggagctgg cgaaacgcat
     7321 cagcacggtg ccggaagcag ttgaaatgca gtctcgcgtt gccaagattt atagcgatcg
     7381 ccaggcgatg gctgccggtg agaaactgtt cgactggggc ggtgcggaaa acctcgctta
     7441 cgccacgctg gttgacgaag gcattccggt tcgcctgtcg ggtgaagact ccggtcgcgg
     7501 taccttcttc caccgccacg cggtgatcca caaccagtct aacggttcca cttacacgcc
     7561 gctgcaacac atccataacg ggcagggcgc gttccgcgtc tgggactccg tactgtctga
     7621 agaagcagtg ctggcgtttg aatacggtta tgccaccgca gaaccacgca ctctgaccat
     7681 ctgggaagcg cagttcggtg acttcgctaa cggtgctcag gtggttatcg accagttcat
     7741 ctcctctggc gaacagaaat ggggccggat gtgtggtctg gtgatgttgc tgccgcacgg
     7801 ttatgaaggg caggggccgg agcactcctc cgcgcgtctg gaacgttatc tgcaactttg
     7861 tgctgagcaa aacatgcagg tgtgcgtacc gtctaccccg gcacaggttt accacatgct
     7921 gcgtcgtcag gcgctgcgcg ggatgcgtcg tccgctggtc gtgatgtcgc cgaaatccct
     7981 gctgcgtcat ccgctggcgg tttccagcct cgaagaactg gcgaacggca ccttcctgcc
     8041 agccatcggt gaaatcgacg agcttgatcc gaagggcgtg aagcgcgtag tgatgtgttc
     8101 tggtaaggtt tattacgacc tgctggaaca gcgtcgtaag aacaatcaac acgatgtcgc
     8161 cattgtgcgt atcgagcaac tctacccgtt cccgcataaa gcgatgcagg aagtgttgca
     8221 gcagtttgct cacgtcaagg attttgtctg gtgccaggaa gagccgctca accagggcgc
     8281 atggtactgc agccagcatc atttccgtga agtgattccg tttggggctt ctctgcgtta
     8341 tgcaggccgc ccggcctccg cctctccggc ggtagggtat atgtccgttc accagaaaca
     8401 gcaacaagat ctggttaatg acgcgctgaa cgtcgaataa ataaaggata cacaatgagt
     8461 agcgtagata ttctggtccc tgacctgcct gaatccgtag ccgatgccac cgtcgcaacc
     8521 tggcataaaa aacccggcga cgcagtcgta cgtgatgaag tgctggtaga aatcgaaact
     8581 gacaaagtgg tactggaagt accggcatca gcagacggca ttctggatgc ggttctggaa
     8641 gatgaaggta caaccgtaac gtctcgtcag atccttggtc gcctgcgtga aggcaacagc
     8701 gccggtaaag aaaccagcgc caaatctgaa gagaaagcgt ccactccggc gcaacgccag
     8761 caggcgtctc tggaagagca aaacaacgat gcgttaagcc cggcgatccg tcgcttgctg
     8821 gctgaacata acctcgacgc cagcgctatt aaaggcaccg gcgtgggtgg tcgtctgacc
     8881 cgtgaagatg tggaaaaaca tctggcgaaa tccccggcga aagagtctgc accggcagcg
     8941 gctgctccgg cggcgcaacc ggctctggct gcacgtagtg aaaaacgtgt cccgatgact
     9001 cgcctgcgta agcgtgtggc agagcgtctg ctggaagcga aaaactccac cgccatgctg
     9061 accacgttca acgaagtcaa catgaagccg attatggatc tgcgtaagca gtacggtgaa
     9121 gcgtttgaaa aacgccacgg catccgtctg ggctttatgt ccttctacgt gaaagcggtg
     9181 gttgaagccc tgaaacgtta cccggaagtg aatgcttcta tcgacggcga tgacgtggtt
     9241 taccacaact atttcgacgt cagcatggcg gtttctacgc cgcgcggcct ggtgacgccg
     9301 gttctgcgtg atgtcgatac cctcggcatg gcagacatcg agaagaaaat caaagagctg
     9361 gcagtcaaag gccgtgatgg caagctgacc gttgaagatc tgaccggtgg taacttcacc
     9421 atcaccaacg gtggtgtgtt cggttccctg atgtctacgc cgatcatcaa cccgccgcag
     9481 agcgcaattc tgggtatgca cgctatcaaa gatcgtccga tggcggtgaa tggtcaggtt
     9541 gagatcctgc cgatgatgta cctggcgctg tcctacgatc accgtctgat cgatggtcgc
     9601 gaatccgtgg gcttcctgat aacgatcaaa gagttgctgg aagatccgac gcgtctgctg
     9661 ctggacgtgt agtagtttaa gtttcacctg cactgtagac aggataaggc attatcgcct
     9721 tctccggcaa ttgaagcctg atgcgacgct taacgcgtct tatcaggcct acgggaagca
     9781 ccaatgtagg tcggataagg cgcttgcgcc gcatccgaca agcgatgcct gatgcgacac
     9841 ttacgcgtct tatcaggcct acaggtgacc gacaatgccc ggaggcgata cgaaatattc
     9901 ggtctacggt ttaaaagata acgattactg aaggatggac agaacacatg aacttacatg
     9961 aatatcaggc aaaacaactt tttgcccgct atggcttacc agcaccggtg ggttatgcct
    10021 gtactactcc gcgcgaagca gaagaagccg cttcaaaaat cggtgccggt ccgtgggtag
    10081 tgaaatgtca ggttcacgct ggtggccgcg gtaaagcggg cggtgtgaaa gttgtaaaca
    10141 gcaaagaaga catccgtgct tttgcagaaa attggctcgg caagcgtctg gtaacgtatc
    10201 aaacagatgc caatggccaa ccggttaacc agattctggt tgaagcagcg accgatatcg
    10261 ctaaagagct gtatctcggt gccgttgtag accgtagttc ccgtcgtgtg gtctttatgg
    10321 cctccactga aggcggcgtg gaaatcgaaa aagtggcgga agaaactccg cagctgatcc
    10381 ataaagttgc gcttgatccg ctgacaggcc cgatgccgta tcagggacgc gagctggcgt
    10441 tcaaactggg tctggaaggt aaactggttc agcagttcac caaaatcttc atgggtctgg
    10501 cgaccatttt cctggagcgc gacctggcgt tgatcgaaat caacccgctg gtcatcacca
    10561 aacagggtga tctgatttgc ctcgacggca aactgggcgc tgatggcaac gcactgttcc
    10621 gccagcttga tctgcgcgaa atgcgtgacc agtcgcagga agatccgcgt gaagcacagg
    10681 ctgcacagtg ggaactgaac tacgttgcgc tggacggtaa catcggttgt atggttaacg
    10741 gcgcaggtct ggcgatgggt acgatggaca tcgttaaact gcacggcggc gaaccggcta
    10801 acttccttga cgttggcggc ggtgcaacca aagaacgtgt aaccgaagcg ttcaaaatca
    10861 tcctctctga cgacaaagtg aaagtcgttc tggttaacat cttcggcggt atcgttcgtt
    10921 gcgacctgat cgctgacggt atcatcggcg cggtagcaga agtgggtgtt aacgtaccgg
    10981 tcgtggtacg tctggaaggt aacaacgccg aactcggcgc gaagaaactg gctgacagcg
    11041 gcctgaatat tattgcagca aaaggtctga cggatgcagc tcagcaggtt gttgccgcag
    11101 tggaggggaa ataatgtcca ttttaattga taaaaacacc aaggttatct gccagggctt
    11161 tactggtagc caggggactt tccactcaga acaggccatt gcatacggca ctaaaatggt
    11221 tggcggcgta accccaggta aaggcggtac tacccacctc ggcctgccgg tgttcaacac
    11281 cgtgcgtgaa gctgttgctg ctactggcgc taccgcttct gttatctacg taccagcacc
    11341 gttctgcaaa gactccattc tggaagctat tgatgcaggc atcaaactga ttatcaccat
    11401 cactgaaggc atcccgacgc tggatatgct gactgtgaaa gtgaaactgg acgaagccgg
    11461 cgttcgtatg atcggcccga actgcccggg cgttatcact ccgggtgaat gcaaaatcgg
    11521 tatccagccg ggtcacattc acaaaccggg taaagtgggt atcgtttccc gttccggtac
    11581 actgacctat gaagcggtta aacagaccac ggattacggt ttcggtcagt cgacctgtgt
    11641 tggtatcggc ggtgacccga tcccaggctc taactttatc gacatcctcg aaatgttcga
    11701 aaaagatccg cagaccgaag cgatcgtgat gatcggtgag atcggcggta gcgctgaaga
    11761 agaagcggca gcgtacatca aagagcacgt taccaagcca gttgtaggtt acatcgctgg
    11821 tgtgactgcg ccgaaaggca aacgtatggg ccacgcgggt gcgatcattg ccggtgggaa
    11881 agggactgcg gatgagaaat tcgctgctct ggaagccgca ggcgtgaaaa ccgttcgcag
    11941 cctggcggat atcggtgaag cactgaaaac tgttctgaaa taaatatctg taataagaaa
    12001 tagccctcgc cgcttccctc tacaggaatg gcgaagggct gtcggtttcg acatggttgg
    12061 ccatcgtatg atggcctttt ttgtgcttat cgcgatgatt ttcgctgcgc tatcagggta
    12121 aatttatagt catcggtatt aaaagcgttg cggctatatt caaacacccg accatcaact
    12181 aaatatccac gcgatacttt ttcaagaatc ggctttgtct ggctgatatt aagcagacgg
    12241 ctcatctctt cggttggcat cagaggaatg atttcctgtt cgctacgatc gataaccatc
    12301 ttcttcactt cttcaataaa gtgatatttc gaattttcca tgacctgcca ggtgagatcc
    12361 gggaacaacg caagcggcat ccaggtttct tccagcgcca ttggcttttg cttgcgatag
    12421 cgcacgcgct tcacatgcca cacacgatcc tgcgcggtga tttgtagctg ttgctgaaga
    12481 aaatcgtcag ccggaatcac ttcaaatatc aggacttcac tgtgtgtatc gacgtgacgg
    12541 tccgacagtt tttcatcaaa actggttaac tgaaaaatat cgtaattgac ccgctcttct
    12601 ttgacgtaag tcccgctgcc ctgaatgctt tcgaggatct gctgctcgac tagctggcgc
    12661 aaagcctgac gcaccgtaac ccggctgacg ccaaactctg tttgtagcgc tgattcagtg
    12721 ggtaacgcat cgccaggttt aagctcgcca cgcgcaattt gttcacgaat gcgatcggca
    12781 atctgccggt ataagggctt gtgtcccatt tttagtatct cattaatacg aatttagcca
    12841 ttatgcccga taaattcatc ctgtaaataa tgcaaataca atacaaataa tttcaatcaa
    12901 gtgaaattga tcatataatg gtattgtttt atcgggcaca ctggcgcgac tataaaaacg
    12961 atcaagtgag gatcatgatg aatctgacga ctctgaccca ccgcgatgcg ttgcgtctga
    13021 atgcgcgctt taccagccgt gaagaggcca tccacgcgtt gactcaacgt cttgctgctc
    13081 tggggaaaat ttccagtact gagcaatttc tggaagaagt gtatcgccgt gaaagccttg
    13141 gcccgaccgc cttaggtgaa gggttggctg tgccgcatgg caaaactgct gcggtaaaag
    13201 aagcggcgtt tgcggtcgcc acactcagcg agccgcttca gtgggaaggc gttgatggcc
    13261 cggaagcagt tgatttagtg gtgctgctgg cgattccccc caatgaagcg ggtactatgc
    13321 atatgcaact gctgacagcg ctgaccacgc gccttgcgga tgatgagatt cgggcgcgta
    13381 tacagtcggc gacgacgcct gatgagttgc tctcggcgct ggatgacaag ggaggcacgc
    13441 aaccttctgc ctctttttcc aacgcgccaa ctatcgtctg cgtaccggcc tgtccggcgg
    13501 gtattgctca cacctatatg gctgcggaat atctggaaaa agccggacgc aaactcggcg
    13561 taaatgttta cgttgaaaaa caaggcgcta acggcattga agggcgttta acggcggatc
    13621 aactcaatag tgcaaccgcc tgtatttttg cggctgaagt cgccatcaag gagagtgagc
    13681 gttttaatgg cattcccgcg ctttcagtgc ctgttgccga gccgattcgc catgcagaag
    13741 cgttgatcca acaagcgctt accctcaagc gtagcgatga gacgcgtacc gtacagcaag
    13801 atacgcaacc ggtgaaaagt gtcaaaacgg agctgaaaca ggcactgttg agcggaatct
    13861 cttttgccgt accgttgatt gtcgcggggg gcacggtgct ggcggtcgcg gtattactgt
    13921 cgcaaatctt cgggctacaa gatctgttta atgaagaaaa ctcctggctg tggatgtacc
    13981 gcaagctggg cggcgggctg ctcggaattt tgatggtacc ggtgctcgcg gcctataccg
    14041 cctattctct ggcagataaa ccggcgttag cgccaggctt tgcggctgga cttgccgcca
    14101 acatgatcgg ctccgggttt ctcggcgcgg tcgttggcgg attgatagcc ggttacttga
    14161 tgcgctgggt gaaaaatcac ttgcgtctta gcagtaaatt caatggattc ctgacttttt
    14221 atctctaccc ggtgctcggt acgttgggag cgggcagtct gatgctgttt gtggtgggag
    14281 aacctgtcgc atggatcaat aactcgctta ccgcctggct gaacggtctg tcaggaagta
    14341 acgcgctgtt gctgggtgcc attttcggtt ttatgtgttc ctttgatctt ggagggccag
    14401 tgaacaaagc cgcttatgca ttctgcctgg gcgcaatggt gaacggcgtt tacggcccgt
    14461 atgccatttt cgcctccgtc aaaatggttt cggcatttac cgtaaccgct tccacgatgc
    14521 tcgcaccgcg cctgtttaaa gagtttgaaa ttgagaccgg gaaatccacc tggctgttag
    14581 ggctggtagg tattaccgaa ggggcgatcc cgatggcgat tgaagatccg ctgcgggtta
    14641 ttggttcgtt tgtgctgggc tctatggtaa cgggcgctat tgtcggtgcg atgaatatcg
    14701 gcctttcgac acccggtgcc ggcattttct cgctcttttt acttcatgat aatggcgcgg
    14761 gcggtgttat ggcggcaatt ggctggtttg gtgcggcatt ggtgggggct gcaatctcga
    14821 ctgcaattct cctgatctgg cggcgtcacg cggttaagca tggcaactat ctgactgatg
    14881 gcgtaatgcc ataaacaaaa aggaaacgac gatgaaagcg gtatctcgcg ttcacatcac
    14941 cccgcatatg cactgggatc gagagtggta tttcaccacc gaagagtcac gtattctgct
    15001 ggtcaataat atggaagaga tcctgtgccg actggaacag gacaacgaat acaaatatta
    15061 cgtactcgac gggcaaacgg cgatcctcga agattatttc gcggtgaaac cggaaaacaa
    15121 agaccgtgtg aagaaacagg tagaagccgg caagttgatt atcggcccct ggtataccca
    15181 gaccgatacc acgattgttt ctgcggaatc catcgtccgt aatctgatgt acggaatgcg
    15241 tgactgcctc gcgtttggcg agccgatgaa aataggttat ttaccagatt cctttggcat
    15301 gtccgggcaa ctgccgcata tctacaatgg atttggcatt acccgcacca tgttctggcg
    15361 cggatgttcg gagcgccacg gtactgataa aaccgagttt ttgtggcaaa gcagtgacgg
    15421 tagcgaagtg acggcgcagg tgctgccgct gggctacgcc ataggtaagt acttacctac
    15481 cgacgaaaac ggattacgta aacgcctcga cagttatttt gacgtgctgg aaaaagcgtc
    15541 tgtaaccaaa gagattttgc tgccgaatgg tcatgaccag atgccattgc agcaaaatat
    15601 cttcgaagtg atggataagc tacgtgagat ctaccctcaa cgtaagtttg tgatgagccg
    15661 ctttgaagag gtatttgaga agatcgaagc gcagcgtgaa agtctggcca ccctgaaagg
    15721 tgaatttatc gatggcaaat atatgcgcgt acatcgcacc atcggttcca cgcgcatgga
    15781 tatcaaaatt gcccacgcac gtattgaaaa taagattgtt aatctgctgg aaccgctggc
    15841 aacgctggcc tggacgttgg gttttgaata ccaccacggc ttgctggaga aaatgtggaa
    15901 agagatctta aaaaatcatg cccacgacag tatcggttgt tgttgcagtg acaaagttca
    15961 tcgcgaaatt gtcgcccgct tcgaactggc tgaagacatg gcggataatc tgctgcgttt
    16021 ctacatgcgc aaaattgccg ataacatgcc acagagtgat gccgacaaac tcgtgctgtt
    16081 taacctgatg ccctggccgc gggaagaagt tattaacacc actgtgcggc tgcgcgccag
    16141 ccagtttaat ctacgagacg atcgcggtca gcctgtaccg tattttattc gccatgcccg
    16201 tgagatcgat ccaggcctaa tcgatcggca aatagttcat tacggtaatt acgatccctt
    16261 tatggagttt gatatacaga tcaaccagat tgtcccttct atgggctatc gcacgcttta
    16321 tatcgaagcg aatcagcctg gcaacgtgat tgcggcaaaa agtgacgctg aagggatact
    16381 ggaaaatgct ttctggcaaa ttgcgctcaa tgaggatggt tctctgcaac tggtagataa
    16441 agacagcggt gtgcgctatg accgagtatt gc
//
LOCUS       DADMJE010000092        16381 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.093, whole genome shotgun sequence.
ACCESSION   DADMJE010000092 DADMJE010000000
VERSION     DADMJE010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 16381)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16381)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16381
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.093"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..190
                     /locus_tag="JN001_002583"
     CDS             <1..190
                     /locus_tag="JN001_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001402762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053773.1"
                     /translation="DMLNPTKDTNWNSTCIYKSRHKMLPVNLTQETLFNSKSQDKHAL
                     FPIFTASWRAYRIMNKGA"
     gene            413..910
                     /gene="ubiC"
                     /locus_tag="JN001_002584"
     CDS             413..910
                     /gene="ubiC"
                     /locus_tag="JN001_002584"
                     /EC_number="4.1.3.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709881.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate lyase"
                     /protein_id="HAY9053774.1"
                     /translation="MSHPALTQLRALRYFKEIPALDPQLLDWLLLEDSMTKRFEQQGK
                     TVSVTMIREGFVEQNEIPEELPLLPKESRYWLREILLCADGEPWLAGRTVVPVSTLSG
                     PELALQKLGKTPLGRYLFTSSTLTRDFIEIGRDAGLWGRRSRLRLSGKPLLLTELFLP
                     ASPLY"
     gene            923..1795
                     /gene="ubiA"
                     /locus_tag="JN001_002585"
     CDS             923..1795
                     /gene="ubiA"
                     /locus_tag="JN001_002585"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HAY9053775.1"
                     /translation="MEWSLTQNKLLAFHRLMRTDKPIGALLLLWPTLWALWVATPGVP
                     QLWILAVFVAGVWLMRAAGCVVNDYADRKFDGHVKRTANRPLPSGAVTEKEARALFVV
                     LVLISFLLVLTLNTMTILLSIAALALAWVYPFMKRYTHLPQVVLGAAFGWSIPMAFAA
                     VSESVPLSCWLMFLANILWAVAYDTQYAMVDRDDDVKIGIKSTAILFGQYDKLIIGIL
                     QIGVLALMAIIGELNGLGWGYYWSILVAGALFVYQQKLIANREREACFKAFMNNNYVG
                     LVLFLGLAMSYWHF"
     gene            complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JN001_002586"
     CDS             complement(1950..4373)
                     /gene="plsB"
                     /locus_tag="JN001_002586"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418465.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsB"
                     /protein_id="HAY9053776.1"
                     /translation="MSGWPRIYYKLLNLPLSILVKSKSIPADPAPELGLDTSRPIMYV
                     LPYNSKADLLTLRAQCLAHDLPDPLEPLEIDGTLLPRYVFIHGGPRVFTYYTPKEESI
                     KLFHDYLDLHRSNPNLDVQMVPVSVMFGRAPGREKGEVNPPLRMLNGVQKFFAVLWLG
                     RDSFVRFSPSVSLRRMADEHGTDKTIAQKLARVARMHFARQRLAAVGPRLPARQDLFN
                     KLLASRAIAKAVEDEARSKKISHEKAQQNAIALMEEIAANFSYEMIRLTDRILGFTWN
                     RLYQGINVHNAERVRQLAHDGHELVYVPCHRSHMDYLLLSYVLYHQGLVPPHIAAGIN
                     LNFWPAGPIFRRLGAFFIRRTFKGNKLYSTVFREYLGELFSRGYSVEYFVEGGRSRTG
                     RLLDPKTGTLSMTIQAMLRGGTRPITLIPIYIGYEHVMEVGTYAKELRGATKEKESLP
                     QMLRGLSKLRNLGQGYVNFGEPMPLMTYLNQHVPDWRESIDPIEAVRPAWLTPTVNNI
                     AADLMVRINNAGAANAMNLCCTALLASRQRSLTREQLTEQLNCYLDLMRNVPYSTDST
                     VPSASASELIDHALQMNKFEVEKDTIGDIIILPREQAVLMTYYRNNIAHMLVLPSLMA
                     AIVTQHRHISRDVLMEHVNVLYPMLKAELFLRWDRDELPDVIDALANEMQRQGLITLQ
                     DDELHINPSHSRTLQLLAAGARETLQRYAITFWLLSANPSINRGTLEKESRTVAQRLS
                     VLHGINAPEFFDKAVFSSLVLTLRDEGYISDSGDAEPAETMKVYQLLAELITSDVRLT
                     IESATQGEG"
     gene            4544..4912
                     /locus_tag="JN001_002587"
     CDS             4544..4912
                     /locus_tag="JN001_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HAY9053777.1"
                     /translation="MANNTTGFTRIIKAAGYSWKGLRAAWINEAAFRQEGVAVLLAVV
                     IACWLDVDAITRVLLISSVMLVMIVEILNSAIEAVVDRIGSEYHELSGRAKDMGSAAV
                     LIAIIVAVITWCILLWSHFG"
     gene            5022..5630
                     /gene="lexA"
                     /locus_tag="JN001_002588"
     CDS             5022..5630
                     /gene="lexA"
                     /locus_tag="JN001_002588"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000646075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="repressor LexA"
                     /protein_id="HAY9053778.1"
                     /translation="MKALTARQQEVFDLIRDHISQTGMPPTRAEIAQRLGFRSPNAAE
                     EHLKALARKGVIEIVSGASRGIRLLQEEEEGLPLVGRVAAGEPLLAQQHIEGHYQVDP
                     SLFKPNADFLLRVSGMSMKDIGIMDGDLLAVHKTQDVRNGQVVVTRIDDEVTVKRLKK
                     QGNKVELLPENSEFKPIVVDLRQQSFTIEGLAVGVIRNGDWL"
     gene            5649..7028
                     /gene="dinF"
                     /locus_tag="JN001_002589"
     CDS             5649..7028
                     /gene="dinF"
                     /locus_tag="JN001_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709876.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter DinF"
                     /protein_id="HAY9053779.1"
                     /translation="MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVP
                     LLGLVDTAVIGHLDSPVYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQA
                     LARALVQPLLLALGAGALIALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPAS
                     LANLVLLGWLLGVQYARAPVILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYA
                     TLLIGLLMVRKILKLRGISGEMLKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVL
                     GARLGSDIIAVNAVLMTLLTFTAYALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACR
                     QSGIVALLFSVVYLLAGEHIIALLTSLTQIQQLADRYLIWQVILPLVGVWCYLLDGMF
                     IGATRAAEMRNSMAVAAAGFALTLLTLPWLGNHALWLALTVFLALRGLSLAAIWRRHW
                     RNGTWFAAT"
     gene            7144..7353
                     /locus_tag="JN001_002590"
     CDS             7144..7353
                     /locus_tag="JN001_002590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HAY9053780.1"
                     /translation="MNKDEAGGNWKQFKGKVKEQWGKLTDDDMTIIEGKRDQLVGKIQ
                     ERYGYQKDQAEKEVVDWETRNEYRW"
     gene            complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JN001_002591"
     CDS             complement(7395..7910)
                     /gene="zur"
                     /locus_tag="JN001_002591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418470.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc uptake transcriptional repressor Zur"
                     /protein_id="HAY9053781.1"
                     /translation="MEKTTTQELLAQAEKICAQRNVRLTPQRLEVLRLMSLQDGAISA
                     YDLLDLLREAEPQAKPPTVYRALDFLLEQGFVHKVESTNSYVLCHLFDQSTHTSAMFI
                     CDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVIEAHGLCAACVEVEACRHPEQCQH
                     DHSVQVKKKPR"
     gene            8228..8482
                     /locus_tag="JN001_002592"
     CDS             8228..8482
                     /locus_tag="JN001_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053782.1"
                     /translation="MLKIIPGATGYFNKTLNSNQFDNEDAIKDKLDNRGSIKGKLNNI
                     YGKSIDYAALRHRDIIIAKIDLFIQRITHNLWHARKKMCF"
     gene            8506..9213
                     /locus_tag="JN001_002593"
     CDS             8506..9213
                     /locus_tag="JN001_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2713 family protein"
                     /protein_id="HAY9053783.1"
                     /translation="MWVNKYIDDCTDEDLNDRDFIASVVDRAIFHFAINSICNPGDNK
                     DATPIEQCTFDVETKNGLPSTVQLFYEESKDNEPLANIHFQTIGSGFLTFVNACQEHD
                     DNSLKLFASLLISLSYSSAYADLSETVYINENNESYLKAQFEKLSQRDMKKYLGEMKR
                     LADGGEMNFDGYLDKMSHLVNEGTLDPDILSKMRDAAPQLISFAKSFDPTSKEEIKIL
                     TDTSKLIYDLFGVKSEK"
     gene            9576..10613
                     /gene="dusA"
                     /locus_tag="JN001_002594"
     CDS             9576..10613
                     /gene="dusA"
                     /locus_tag="JN001_002594"
                     /EC_number="1.3.1.-"
                     /EC_number="1.3.1.91"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(20/20a) synthase DusA"
                     /protein_id="HAY9053784.1"
                     /translation="MHGNSEMQKINQTSAMPEKTDVHWSGRFSVAPMLDWTDRHCRYF
                     LRLLSRNTLLYTEMVTTGAIIHGKGDYLAYSEEEHPVALQLGGSDPAALAQCAKLAEA
                     RGYDEINLNVGCPSDRVQNGMFGACLMGNAQLVADCVKAMRDVVSIPVTVKTRIGIDD
                     QDSYEFLCDFINTVSGKGECGMFIIHARKAWLSGLSPKENREIPPLDYPRVYQLKRDF
                     PHLTMSINGGIKSLEEAKAHLQHMDGVMVGREAYQNPGILAAVDREIFGSSDTDAYPV
                     AVVRAMYPYIERELSQGTYLGHITRHMLGLFQGIPGARQWRRYLSENAHKAGADINVL
                     EHALKLVADKR"
     gene            10747..10989
                     /gene="pspG"
                     /locus_tag="JN001_002595"
     CDS             10747..10989
                     /gene="pspG"
                     /locus_tag="JN001_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313059.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="envelope stress response protein PspG"
                     /protein_id="HAY9053785.1"
                     /translation="MLELLFVIGFFVMLMVTGVSLLGIIAALVVATAIMFLGGMLALM
                     IKLLPWLLLAIAVVWVIKAIKAPKVPKYQRYDRWRY"
     gene            complement(11154..12137)
                     /locus_tag="JN001_002596"
     CDS             complement(11154..12137)
                     /locus_tag="JN001_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone oxidoreductase"
                     /protein_id="HAY9053786.1"
                     /translation="MATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFID
                     TYIRSGLYPPPSLPSGSGTEAAGIVSKVGSGVKHIKAGDRVVYAQSALGAYSSVHNIN
                     ADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW
                     AKALGAKLIGTVGTAQKAQSALKAGAWQVINYREENLVERLKEITGGKKVRVVYDSVG
                     RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREEL
                     TEASNELFSLIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP"
     gene            12220..13635
                     /locus_tag="JN001_002597"
     CDS             12220..13635
                     /locus_tag="JN001_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase DnaB"
                     /protein_id="HAY9053787.1"
                     /translation="MAGNKPFNKQQAEPRERDPQVAGLKVPPHSIEAEQSVLGGLMLD
                     NERWDDVAERVVADDFYTRPHRHIFTEMARLQESGSPIDLITLAESLERQGQLDSVGG
                     FAYLAELSKNTPSAANISAYADIVRERAVVREMISVANEIAEAGFDPQGRTSEDLLDL
                     AESRVFKIAESRANKDEGPKNIADVLDATVARIEQLFQQPHDGVTGVNTGYDDLNKKT
                     AGLQPSDLIIVAARPSMGKTTFAMNLVENAAMLQDKPVLIFSLEMPSEQIMMRSLASL
                     SRVDQTKIRTGQLDDEDWARISGTMGILLEKRNIYIDDSSGLTPTEVRSRARRIAREH
                     GGIGLIMIDYLQLMRVPALSDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQR
                     ADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
                     LTFNGQWSRFDNYAGPQYDDE"
     gene            13688..14767
                     /gene="alr"
                     /locus_tag="JN001_002598"
     CDS             13688..14767
                     /gene="alr"
                     /locus_tag="JN001_002598"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HAY9053788.1"
                     /translation="MQAATVVINRRALRHNLQRLRELAPASKMVAVVKANAYGHGLLE
                     TARTLPDADAFGVARLEEALRLRAGGITKPVLLLEGFFDARDLPTISAQHFHTAVHNE
                     EQLAALEEASLDEPVTVWMKLDTGMHRLGVRPEQAGAFYHRLTQCKNVRQPVNIVSHF
                     ARADEPKCGATEKQLAIFNTFCEGKPGQRSIAASGGILLWPQSHFDWVRPGIILYGVS
                     PLEDRSTGADFGCQPVMSLTSSLIAVREHKAGEPVGYGGTWVSERDTRLGVVAMGYGD
                     GYPRAAPSGTPVLVNGREVPIVGRVAMDMICVDLGPQAQDKAGDPVILWGEGLPVERI
                     AEMTKVSAYELITRLTSRVAMKYVD"
     gene            15020..16213
                     /gene="tyrB"
                     /locus_tag="JN001_002599"
     CDS             15020..16213
                     /gene="tyrB"
                     /locus_tag="JN001_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709866.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic amino acid transaminase"
                     /protein_id="HAY9053789.1"
                     /translation="MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIP
                     QLKAVAEAEARLNAQPHGASLYLPMEGLNSYRHAIAPLLFGADHPVLQQQRVATIQTL
                     GGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNSVRF
                     NDLLATLKTLPARSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGF
                     SAGMEEDAYAIRAIASAGLPALVSNSFSKIFSLYGERVGGLSVLCEDAEAAGRVLGQL
                     KATVRRNYSSPPNLGAQVVAAVLNDEALKASWLAEVEEMRTRILAMRQELVKVLSTEM
                     PERNFDYLLNQRGMFSYTGLSAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKA
                     FAAVM"
BASE COUNT         3915 a         3904 c         4335 g         4227 t
ORIGIN      
        1 tgatatgttg aatcctacaa aagataccaa ttggaattct acgtgtatct ataaatccag
       61 acataagatg ttgcctgtta atcttactca ggaaacactt ttcaactcca aatctcagga
      121 taaacatgcg cttttcccca tttttactgc gagttggcga gcttatcgta taatgaataa
      181 gggtgcttaa gtaaaggaaa acatcaccgt tcctggcatc ctgggcggtg atgcccctat
      241 ggttgccctc gccagcgcgg gcatcggcaa agcgtaaggt tcaaaagcga tttaccactt
      301 catgcgattg ttgcgttttt gttgcgcatt agatcactta atttgcttta catctcccgt
      361 aaacactttt ctgcgataca atgcctttac gttatgtaac ggagagttcg gcatgtcaca
      421 ccccgcgtta acgcaactgc gtgcgctgcg ctattttaaa gagatccctg ccctggatcc
      481 gcaactgctc gactggctgt tgctggagga ttccatgaca aaacgttttg aacagcaggg
      541 aaaaacggta agcgtgacga tgatccgcga agggtttgtc gagcagaatg aaatccccga
      601 agaactgccg ctgctgccga aagagtctcg ttactggtta cgtgaaattt tgttatgtgc
      661 cgatggtgaa ccgtggcttg ccggtcgtac cgtcgttcct gtgtcaacgt taagcgggcc
      721 ggagctggcg ttacaaaaat tgggtaaaac gccgttagga cgctatctgt tcacatcatc
      781 gacattaacc cgggacttta ttgagatagg ccgtgatgcc gggctgtggg ggcgacgttc
      841 ccgcctgcga ttaagcggta aaccgctgtt gttaacagaa ctgtttttac cggcgtcacc
      901 gttgtactaa gaggaaaaaa atatggagtg gagtctgacg cagaataagc tgctggcgtt
      961 tcatcgctta atgcgtacgg ataagccaat tggcgcgtta ctgctgctct ggccaacatt
     1021 atgggcgttg tgggtggcga caccgggcgt tcctcagctc tggatcctgg cggtatttgt
     1081 cgcgggtgtc tggctgatgc gcgctgccgg atgtgtggtg aatgattatg ctgaccgaaa
     1141 gtttgatggt catgttaagc gcacggcgaa ccgaccactt cccagcggcg cggtaacaga
     1201 gaaagaggcg cgcgcgctgt ttgtagtgct ggtactgatt tcgtttttac tggtactgac
     1261 gctgaatacg atgaccattc tgttgtcgat tgccgctctg gcgttggcgt gggtgtaccc
     1321 gtttatgaag cggtataccc atctcccgca agtggtgctg ggcgcggcgt ttggctggtc
     1381 gattccaatg gcttttgccg ctgtgagtga gtcggtgcca ttgagttgct ggttaatgtt
     1441 cctcgccaat attctctggg cggtggctta cgacacgcag tatgcgatgg ttgaccgcga
     1501 tgatgatgtg aagattggca ttaaatccac ggcaatcctg ttcggccaat acgataaatt
     1561 gattattggt attttgcaga ttggcgtact ggcactgatg gcgatcatcg gtgagttaaa
     1621 tggcttaggc tggggatatt actggtcaat tctggtggct ggcgcgctgt ttgtttatca
     1681 acaaaaactg attgccaacc gcgagcgtga agcctgcttt aaagcattta tgaataataa
     1741 ctatgttggt ctggtactat ttttagggct ggcaatgagt tactggcatt tctgatgatg
     1801 taaaaaagcc ggatgatcat ccggctttct tctgggttgc ctgatgcgcg gcgcttctca
     1861 ggcctacaca acacatcgca atttattgaa tttgcagatt atggaatgcc ggataaggcg
     1921 ttttcgccgc atccggcaat tctctctggt tacccttcgc cctgcgtcgc actctcaatc
     1981 gtcaaacgca cgtctgatgt aatcaactcc gccagcaact gataaacctt catcgtttct
     2041 gccggttcgg catcgccgct atcgctgata tacccttcat cacgcagcgt cagcaccaga
     2101 gaactgaaca ccgccttgtc gaagaactcc ggcgcgttga taccgtgcag cacggagaga
     2161 cgttgcgcga cggtgcggct ctctttctcc agcgtaccgc ggttgatcga cgggttagcg
     2221 ctcaacagcc agaaggtgat ggcataacgt tgcagcgttt cgcgcgcgcc tgcggccagc
     2281 agctgtagcg tgcgagaatg cgacgggttg atatgcaact catcatcttg cagggtaatc
     2341 agcccctgac gttgcatctc atttgccaac gcatcaataa cgtccggcaa ctcgtcgcga
     2401 tcccagcgca ggaacagctc cgctttcagc attgggtaaa gcacattgac gtgctccatc
     2461 aatacgtcgc gggagatgtg gcgatgctgg gtgacaattg ccgccatcag cgaaggcagc
     2521 accaacatat gcgcaatgtt gttgcgatag taggtcatca gcaccgcttg ctcgcgcggc
     2581 agaatgatga tgtcgccgat agtgtctttc tcaacttcaa acttgttcat ttgcagcgcg
     2641 tgatcgataa gctcgctggc gctggctgaa ggaacggtag agtccgtgga gtaaggtacg
     2701 ttgcgcatca gatccaggta gcagttgagt tgctcggtta actgctcgcg ggtaagtgag
     2761 cgctgacgtg atgccagtag cgcggtacag cagaggttca tggcgtttgc cgcgcctgcg
     2821 ttgttaatgc gtaccatcag atcggcagca atattattga ccgtcggcgt taaccatgcc
     2881 ggacgcaccg cttcgatggg atcgatagat tcacgccagt caggtacatg ctggttaagg
     2941 taggtcatca acggcattgg ttcaccgaag ttgacgtaac cctgaccgag attacgcagc
     3001 ttgcttaaac cgcgcagcat ctgcggcagg ctctctttct ctttcgtcgc accgcgcagt
     3061 tctttggcgt aagtacccac ttccatgacg tgctcataac cgatatagat cggaatcagc
     3121 gtaatcggac gcgtgccgcc acgcagcatc gcctgaatgg tcatcgacag cgtaccggtt
     3181 ttcggatcca gcaaacgccc cgtacgggaa cgaccgcctt ccacgaaata ctcgacggaa
     3241 taaccacggc tgaacagttc gccgagatac tcacggaaaa cggtggaata aagtttattg
     3301 cctttaaacg tacggcgaat aaagaacgcc cccagacggc ggaaaatcgg cccggccggc
     3361 cagaaattca ggttgatccc ggcggcgata tgcggcggca ccagcccctg gtggtacagc
     3421 acgtaagaaa gtagcaggta gtccatgtga ctgcggtggc aaggcacata caccagctca
     3481 tgaccgtcgt gggccagctg gcgaacgcgc tcggcgttat ggacgttgat gccctgataa
     3541 agtcggttcc aggtgaagcc cagaatgcgg tcagtcaggc ggatcatctc gtaagagaaa
     3601 ttcgccgcaa tctcttccat cagcgcaatc gcgttctgct gcgctttttc atgggagatt
     3661 tttttgctgc gcgcttcatc ttctaccgct ttggcaatgg cgcgggaggc gagcagctta
     3721 ttaaacagat cctgacgagc aggcagacgt gggcccacag cagccagacg ttgacgggca
     3781 aagtgcatac gcgccacgcg cgccagtttc tgtgcgatag ttttatccgt gccgtgttca
     3841 tccgccatac ggcgcagcga aactgacggc gagaaacgca caaaactgtc gcgaccgagc
     3901 cacagtacgg cgaaaaattt ctgtacgccg ttaagcatac gcagcggcgg gtttacttcg
     3961 cctttttcac gccccggcgc gcgaccaaac atcaccgata ctggcaccat ctgcacatcc
     4021 agatttgggt tgctacggtg caaatcgaga tagtcgtgga acagcttaat agactcttct
     4081 ttcggcgtgt aataggtgaa tacacgcggc ccgccgtgaa tgaacacata gcgcggcagt
     4141 agcgtgccgt cgatttccag cggctctaac gggtcaggca agtcatgagc cagacactgg
     4201 gcgcgtaacg tcagcaaatc tgctttcgag ttgtacggta aaacgtacat aattggacga
     4261 gaggtatcca gccccagttc cggggcagga tctgccggaa tagacttgct ttttaccagg
     4321 atgcttaatg gtaaattcag taatttgtag taaattcgtg gccagccgga cataaacgat
     4381 gtaaagcctc tggttaataa tgcaaatgcg cggcaaggat agcagaaagt catgggaaat
     4441 tctgtggtat ccgctcatgt ttcgcgcggc gttacgcaaa cccgaatcat cggatttaac
     4501 ggtacactga tattgacgct cataatgtaa aaaggttctt tcaatggcca ataataccac
     4561 tggattcacc cgaattatca aagctgctgg ctattcctgg aaaggtttac gcgctgcatg
     4621 gatcaacgaa gcggcattcc gtcaggaagg cgtagcggta ttgttggcgg tggtcatcgc
     4681 ctgctggctg gatgtggacg caattacccg cgtgctgctt atcagctccg tgatgctggt
     4741 gatgattgtg gaaatcctca atagcgccat cgaagcagtg gttgaccgaa ttggctctga
     4801 ataccatgag ctttccggac gcgcaaaaga tatgggatcc gccgcggtgc tgattgcgat
     4861 tatcgtcgcc gtgataacct ggtgcatcct gttatggtcg cattttggat aacccttcca
     4921 gaattcgata aatctctggt ttattgtgca gtttatggtt ccaaaatcgc cttttgctgt
     4981 atatactcac agtataactg tatatacacc cagggggcgg aatgaaagcg ttaacggcca
     5041 ggcaacaaga ggtgtttgat ctcatccgtg atcacatcag ccagacaggt atgccgccga
     5101 cgcgtgcgga aatcgcgcag cgtttggggt tccgttcccc aaacgcggct gaagaacatc
     5161 tgaaggcgct ggcacgcaaa ggagttattg aaattgtttc cggcgcatca cgcgggattc
     5221 gtctgttgca ggaagaggaa gaagggttgc cgctggtagg tcgtgtggct gccggtgaac
     5281 cgcttctggc gcagcagcat attgaaggtc attatcaggt cgatccttcc ttattcaagc
     5341 cgaatgctga tttcctgctg cgcgtcagcg ggatgtcgat gaaagatatt ggcattatgg
     5401 atggcgactt gctggcagtg cataaaactc aggatgtacg taacggtcag gtcgttgtca
     5461 cacgtattga tgacgaagtt accgttaagc gcctgaaaaa acagggcaat aaagtcgaac
     5521 tgttgccaga aaatagcgag tttaaaccaa ttgtcgttga ccttcgtcag cagagcttca
     5581 ccattgaagg gctggcggtt ggagttattc gcaacggcga ctggctgtaa catatctctg
     5641 agaccgcgat gccgccaggc gtcgcggttt gtttttcatc tctcttcatc aggcttgtct
     5701 gcatggcatt cctcacttca tctgataaag cactctggca tctcgcctta cccatgattt
     5761 tctccaatat caccgttccg ttgctgggac tggtcgatac ggcggtaatt ggtcatcttg
     5821 atagtccagt ttatttgggc ggcgtggcgg ttggtgcaac ggcgaccagc tttctcttta
     5881 tgctgttgct gtttttacgc atgagcacca ccgggctgac tgcgcaggct tatggtgcca
     5941 aaaatcctca ggcattagcc cgtgcgctgg tgcaaccgtt gctgttggcg ttgggggcag
     6001 gggcgttaat tgcgctgctg cgtacaccga ttatcgatct ggcactgcat attgttggcg
     6061 gtagtgaagc agtcctggaa caggcgcggc gctttcttga aatccgctgg ttaagcgcac
     6121 cggcgtcact ggcgaatctg gtattacttg gttggttact cggcgtgcaa tatgcccgtg
     6181 cgccagtaat tttgttagtg gtcggcaata tcctcaacat tgtgctggat gtctggctgg
     6241 tgatggggct gcatatgaac gtgcagggcg cggcgctggc gacggttatt gcggaatatg
     6301 caacattgct gattggtctg ctaatggtgc gtaaaatcct caaactacgc ggaatttccg
     6361 gcgaaatgct gaaaactgcc tggcgaggaa acttccgtcg cttgctggcg cttaaccgcg
     6421 atatcatgct gcgttcgctg ttgttgcaac tctgtttcgg cgcgatcacc gtacttggtg
     6481 cgcgactggg gagtgacatt atcgctgtta acgcggttct gatgacgcta ctcaccttta
     6541 ccgcctatgc gctggatggt tttgcctacg cggttgaagc gcattccggt caggcgtacg
     6601 gtgcgcgcga cggtagccag ttgctggatg tctggcgggc agcgtgccgc cagtcgggga
     6661 tcgtagcgtt actgttttcg gtagtttatt tgctggcagg ggaacacatc attgcgttgc
     6721 tgacgtcgtt aacccagatt cagcagctgg ccgaccgcta tcttatctgg caggtgattt
     6781 tgccgttggt tggcgtctgg tgttatctgc tggacggcat gtttataggc gcaacgcgcg
     6841 cagccgaaat gcgtaacagt atggcggtgg ccgccgcagg ttttgcgctg acgctcctta
     6901 cgctgccgtg gctgggtaat catgctttgt ggctggcgtt aaccgtcttt ctggcgttgc
     6961 gcgggctttc tctggcggct atctggcggc gtcactggcg caacggtacc tggtttgccg
     7021 caacgtgacg gttaaaaatt ctgaataaat aatcctaagc caaattgctg actacactta
     7081 atctcacgtt cagaagaaaa gtgaacgtac tctcattcac aacctaacga tgaggtcttg
     7141 attatgaata aagatgaagc cggcggtaac tggaaacagt ttaaaggtaa agtgaaagag
     7201 caatggggca aactgaccga tgatgatatg acgatcattg aaggtaaacg tgatcaactg
     7261 gtcggtaaaa tccaggaacg ttatggttat cagaaagatc aggcagaaaa agaggtcgtg
     7321 gattgggaaa cccgcaatga atatcgctgg taattaatcc ctcctgcccg acgtgtacaa
     7381 ggatgtacgc cctcttaacg cggtttcttt ttcacctgca cagagtgatc atgctggcac
     7441 tgttcaggat gacgacacgc ttccacttcc acgcatgccg cacagagccc atgtgcttca
     7501 atcacattat gccgcagggc aaaccccatt tttgccgcca gcgtatgcat gatgtcttcc
     7561 acgccttctg cacactcttc tttcactgcg ccgcagcgat cgcaaataaa catggctgaa
     7621 gtatgggtgg actggtcgaa cagatgacag agcacataac tgttggtgga ttccacctta
     7681 tgcacaaaac cttgctcaag cagaaaatcc agcgcgcgat aaaccgttgg cggcttggct
     7741 tgcggttcag cttcgcgcag taaatcaagc agatcataag cgctgatagc gccatcctgc
     7801 agactcatca ggcgcaacac ttccaggcgc tgtggggtca ggcgcacatt acgctgcgcg
     7861 cagatttttt cagcctgcgc taataactcc tgcgttgtgg tcttttccat cgggcacctc
     7921 aaagtggggg ttaagaatgt ccttacttta ccatgttcca ggaaaaacac cgagaaccct
     7981 tattgttgcc gtaatgttga ttttctgttt tgtaggtaag gtgttatgtt gccttgtcgt
     8041 accattatca acacgataat aattaataat tcatttttaa ataaattgct tcaagttaac
     8101 tcgctattta tttaactggg tttaaacgca tacctgtagt tcagaaatta tgagcgattt
     8161 ttgatagtga ccagatggca aaagaattat aaggaggaca cggtacgaca aaaaaggtag
     8221 atgaatcatg ttgaagataa tacccggtgc aactggatac tttaataaaa cactcaattc
     8281 aaatcaattc gataatgaag atgcaatcaa agataaatta gataatagag gttcaatcaa
     8341 aggtaaatta aataatatat atggtaaatc tattgattat gcagcgctgc gtcatcggga
     8401 tataattatt gcaaaaatag atttgtttat tcaacgaatc acgcataatt tatggcatgc
     8461 acgtaaaaaa atgtgttttt aattgagcaa ataaatgatc tcaaaatgtg ggtcaataag
     8521 tatattgacg attgcactga tgaggattta aacgatcgtg actttattgc atcagttgtt
     8581 gaccgggcta tttttcattt cgcgattaat agtatatgta atcctgggga taataaagat
     8641 gcgactccca ttgaacaatg tacttttgat gtagaaacta agaatggcct tccctccacg
     8701 gttcagctat tttatgagga atctaaggat aatgaacctt tagcgaatat acattttcaa
     8761 acaataggtt ctggtttttt aacgtttgtt aatgcctgcc aggaacatga tgacaacagc
     8821 ttaaaattat ttgcttcgct gttaatttca ctttcatatt ctagtgccta cgcagattta
     8881 tcagaaacag tgtatattaa tgaaaataat gagagctacc tgaaagctca gtttgaaaaa
     8941 ttatctcaac gtgatatgaa gaagtacctg ggagagatga agcgtctggc tgatggggga
     9001 gaaatgaatt ttgatggcta tctggataag atgtcacatc tggtgaatga agggacgctc
     9061 gatcctgata ttttaagcaa aatgcgagat gctgcaccac aattaattag cttcgcgaag
     9121 tcgtttgacc caacctcaaa ggaagagatt aaaatactta cagacacttc taaattaatt
     9181 tatgatttgt tcggggttaa atcggagaaa taatatgtga agttcttcga tagtatggaa
     9241 ggcattatat aaaaggaccc aatatttatt gggtcctttt ttctctatca atgctattag
     9301 cagggagata tatcaccaaa gtttaatgtg tgatttttta tttatcgtcg aacctggatt
     9361 gtttatcatt ggccttaaca aagttaacgg ctaataagat tatttccatc acttcgtgag
     9421 agcttcatgc cttgagagga tctcaatttt cttttgcaat gagacaggcg cttcctgttg
     9481 ttatggtata gtaccccgct attgagcctc ctgaatagtg atgctgaata acataacccc
     9541 atgatatatc gataaaataa tctctacatt tgaaaatgca cggtaattct gaaatgcaaa
     9601 aaatcaacca aaccagcgca atgcctgaaa aaactgacgt tcactggagt ggtcggttta
     9661 gcgttgcacc aatgctcgac tggacggaca gacattgccg ctatttcttg cgtctgcttt
     9721 cccgcaatac gttgctgtat accgaaatgg tgaccacagg ggcgattatt cacggtaaag
     9781 gtgattacct ggcgtacagt gaagaagaac atccggtagc gttgcaactc ggcggtagcg
     9841 atccggcggc gctggcacag tgtgcgaagc tggcagaagc gcgtggatat gatgagatca
     9901 acctgaatgt cggctgcccg tctgaccggg tgcagaacgg catgtttggt gcgtgtctga
     9961 tgggtaatgc gcagctggtt gccgattgcg tgaaagcgat gcgcgatgtg gtgtcgattc
    10021 cggtgacggt gaaaacgcgt attggcatcg atgaccagga cagctatgaa tttctctgcg
    10081 atttcatcaa caccgtttcc ggcaaaggcg agtgtgggat gttcatcatc catgcacgta
    10141 aagcctggct ttcggggtta agcccgaaag aaaaccgtga aatcccgccg ctcgattatc
    10201 cgcgtgtgta tcaactgaag cgtgactttc cgcatctgac aatgtcgatt aacggtggta
    10261 tcaagtcgct ggaagaggcc aaagcacacc tgcaacatat ggatggcgtg atggtcgggc
    10321 gcgaggcgta tcagaatccg ggtattctgg cggcggtaga ccgggagatc tttggttcct
    10381 cggataccga tgcctatccg gtggcggtag tgcgcgccat gtatccgtac attgagcgtg
    10441 aactcagcca ggggacgtat ctcggccata ttacccggca tatgttgggc ttgttccagg
    10501 gtattcctgg cgcgcggcag tggcggcgtt atttaagtga aaatgcccat aaagcgggtg
    10561 cagacattaa tgtgctggaa cacgcgctca aactggtggc ggataagcgt taacttttca
    10621 ccaaaaagta gtcaaattca ccacgccctg cgcaccgtcg cggggcgttt tgctgttaaa
    10681 tcaatagatt atttttggca tgattcttgt aatgccagca agagatttca tatttgggag
    10741 agcatcatgc tggaactact ttttgtgatt ggcttttttg tcatgctgat ggtcaccggc
    10801 gtttcgttgc tgggcattat cgccgcgctg gttgtggcga cggccattat gttcctcggc
    10861 ggtatgctgg cattgatgat taagttgctg ccgtggttac tactggcgat tgcggtggtg
    10921 tgggttatta aggcgattaa agcaccaaaa gtgcctaaat atcagcgtta tgaccgctgg
    10981 cgttactaag ggattgtgcg gatgatcaca acctaaggtt ttatccttag aacaaaatag
    11041 gaattgataa tcaaatctgt cactattgcg cctctaacag attcatcgtg ctgtacccta
    11101 catacagccg actataaaaa gaaagggctt cccaggtgga agccctattt cttttatgga
    11161 atcagcaggc tggaaccttg cgtcgcccgg ctttccagaa tctcatgcgc acgctgcgca
    11221 tccttcagcg gatatttctg ctgctcggcg acatcgacct taatcacacc gctggcaatc
    11281 aaagagaaca gttcattact ggcctcggtt aattcctccc gtgtggtgat atagccttgc
    11341 agggaagggc gtgtcacata caacgagcct ttttgattga gaatgcctaa gttcacaccg
    11401 gtaaccgcac ctgatgagtt gccaaaactg accattaagc cgcggcgttg caggcaatcc
    11461 agcgaccgtt cccaggtgtc tctgcccacg gaatcgtaca ctacgcgcac tttcttaccg
    11521 ccggtgatct ctttcaatcg ctcgaccaga ttctcttcac gatagttaat aacctgccac
    11581 gcgccggctt ttagcgcgct ctgcgctttt tgcgcggttc ctacggtgcc gataagtttc
    11641 gcgcccagag cttttgccca ctggcaggca atcaagccaa cgccgccagc cgctgcgtgg
    11701 aacaggaact gttcatcggg tttaatttca taggttttgc gcagcagata ataaaccgtt
    11761 aagcctttca ggaaagatgc tgcagcttgc tcaaaagaaa tagccgcagg cagaatcgcc
    11821 gctttatccg cattaatgtt atgcacagag ctgtaagcgc ctaacgccga ctgcgcatag
    11881 actacacgat cgcctgcctt aatatgcttt acaccactgc cgactttact cacgatgcct
    11941 gccgcttcgg tacctgatcc gctgggtagt gatggcggcg ggtaaaggcc gctgcggata
    12001 tacgtgtcga taaaattgat gccgatggct ttattttcga cctggatttc attctctgcc
    12061 ggatcggcag gagtgaactc tacggcttga agtacttccg ggccaccgtg cttgtgaaat
    12121 tcaattcgtg ttgccatgtg tcctccagaa cgtatcgtca gggtctgctt catatggtaa
    12181 agtttcgacc cattctttat ctcggtaact ccattcacta tggcaggaaa taaacccttc
    12241 aacaaacagc aggctgaacc ccgcgaacgc gatccacaag ttgccgggct gaaagtgcct
    12301 ccgcactcga tcgaagcgga gcagtcggtg ttgggcggtt taatgctgga taacgaacgc
    12361 tgggacgatg tagccgagcg tgtggtggca gacgattttt acacccgccc acaccgccat
    12421 atctttactg aaatggcgcg tttgcaggaa agcggtagtc ctatcgatct gattaccctt
    12481 gcggaatcgc tggaacgcca ggggcaactc gatagcgtcg gtggttttgc ttatctggca
    12541 gagctgtcaa aaaatacgcc aagtgcggcg aacatcagtg cttatgctga catcgtgcgt
    12601 gaacgtgccg ttgtccgtga gatgatctcg gttgcgaatg agattgctga agccggtttt
    12661 gatccgcagg ggcgtaccag cgaagatctg ctggaccttg ctgaatcccg cgtctttaaa
    12721 attgccgaaa gtcgtgcaaa caaagacgaa gggccgaaga acatcgccga tgtgctcgac
    12781 gcaaccgtgg cgcgtattga gcagttgttt cagcagccac acgatggcgt taccggagta
    12841 aacaccggtt atgacgatct caacaaaaaa accgctggct tgcagccgtc ggatttgatc
    12901 atcgtcgccg cgcgtccgtc gatgggtaaa acaacatttg cgatgaacct cgtcgaaaac
    12961 gcggcgatgt tgcaggataa accagtactt atcttctcgc tggagatgcc ttcagaacag
    13021 attatgatgc gttctctggc gtcgctgtcg cgcgttgacc agactaaaat ccgtaccggg
    13081 cagctcgatg atgaagactg ggcgcgcatt tccggcacca tgggtatttt gctcgaaaaa
    13141 cgcaatatct atatcgatga ctcctccggc ctgacgccaa cggaagtgcg ttcccgcgca
    13201 cgccgtattg cccgtgaaca cggcggcatc gggcttatca tgatcgacta cctgcaactg
    13261 atgcgcgtac cggcgctttc cgataaccgt acgctggaaa ttgcagaaat ctctcgctcg
    13321 ctgaaagcac tggcgaaaga actgaacgtg ccggtggtgg cgctgtccca gttgaaccgt
    13381 tctctggaac aacgtgccga caaacgcccg gtcaactccg acctgcgtga atctggctct
    13441 atcgagcagg atgcggactt gatcatgttt atctatcgtg atgaggtgta tcacgaaaac
    13501 agtgatttaa aaggcatcgc ggaaattatt atcggtaaac aacgtaacgg cccaatcggg
    13561 acggtacgcc tgacctttaa cggtcaatgg tcgcgcttcg acaactatgc ggggccgcag
    13621 tacgacgacg aataataatt attttatgaa ttaggcaatt aaagcaaaca cttatcaagg
    13681 aacacaaatg caagcggcaa ctgttgtgat taaccgccgc gctctgcgac acaacctgca
    13741 acgtcttcgt gaactggccc ctgccagtaa aatggttgcg gtggtgaaag cgaacgctta
    13801 tggtcacggt cttcttgaga ccgcgcgaac gctccccgat gctgacgcct ttggcgtagc
    13861 ccgtctcgaa gaagctctgc gactgcgtgc ggggggaatc accaaacctg tactgttact
    13921 cgaaggcttt tttgatgcca gagatctgcc gacgatttct gcgcaacatt ttcataccgc
    13981 cgtgcataac gaagaacagc tggctgcgct ggaagaggct agcctggacg agccggttac
    14041 cgtctggatg aaactcgata ccggtatgca ccgtctgggc gtaaggccgg aacaggctgg
    14101 ggcgttttat catcgcctga cacagtgcaa aaacgttcgt cagccggtga atatcgtcag
    14161 ccattttgcg cgcgcggatg aaccaaaatg tggcgcaacc gagaaacaac tcgctatctt
    14221 taataccttt tgcgaaggca aacctggtca acgttccatt gccgcgtcgg gtggcattct
    14281 gctgtggcca caatcgcatt ttgactgggt gcgcccgggc atcattcttt atggcgtctc
    14341 gccgctggaa gatcgctcca ccggtgccga ttttggctgt cagccagtga tgtcactaac
    14401 ctccagcctg attgccgtgc gtgagcataa agccggagag cctgttggtt atggtggaac
    14461 ctgggtaagc gaacgtgata cccgtcttgg cgtagtcgcg atgggctatg gcgatggtta
    14521 tccgcgcgcc gctccatccg gtacgccagt gctggtgaac ggtcgcgaag taccgattgt
    14581 cgggcgcgtg gcgatggata tgatctgcgt agacttaggt ccacaggcgc aggacaaagc
    14641 cggggatccg gtcattttat ggggcgaagg tttgcccgta gaacgtatcg ctgaaatgac
    14701 aaaagtgagc gcttacgaac ttattacgcg cctgacttca agggtcgcga tgaaatacgt
    14761 ggattaatcg ttctgtaata tttgattgtc tgtgccggat gcggcgtgaa tgccttatcc
    14821 ggccaataaa atcctaaaaa ttcaataagt tgatgttctt tcatgctctt ataaaggtcg
    14881 tgcctctggc ggatgttcgt ttgtcatgag tctcactctg ttgctaattg ccgttcgctc
    14941 ctgaacatcc actcgatctt cgccttcttc cggtttattg tgttttaacc acctgcccgt
    15001 aaacctggag aaccatcgcg tgtttcaaaa agttgacgcc tacgctggcg acccgattct
    15061 tacgcttatg gagcgtttta aagaagaccc tcgcagcgac aaagtgaatt taagtatcgg
    15121 tctgtactac aacgaagacg gaattattcc acaactgaaa gccgtggcgg aggcggaagc
    15181 gcgcctgaat gcgcagcccc atggcgcttc gctttattta ccgatggaag ggcttaacag
    15241 ctatcgccat gccattgcgc cgctgctgtt tggtgcggac catccggtac tgcaacaaca
    15301 gcgcgtagca accattcaaa cccttggcgg ctcaggggca ttgaaagtgg gcgcggattt
    15361 cctgaaacgc tacttcccgg aatcaggcgt ctgggtcagc gatcctacct gggaaaacca
    15421 cgtagcaata ttcgccgggg ctggattcga agtgagtact tacccctggt atgacgaagc
    15481 gactaacagc gtgcgcttta atgacctgtt ggcgacgctg aaaacattac ctgcccgcag
    15541 tattgtgttg ctgcatccat gttgccacaa cccaacaggt gccgatctca ctaatgatca
    15601 gtgggatgcg gtgattgaaa ttctcaaagc ccgcgagctt atcccattcc tcgatattgc
    15661 ctatcaagga tttagtgccg gtatggaaga ggatgcctac gctattcgcg ccattgccag
    15721 cgctggatta cccgctctgg tgagcaattc gttctcgaaa attttctccc tttacggcga
    15781 gcgcgtcggc ggactttctg ttctgtgtga agatgccgaa gccgctggcc gcgtactggg
    15841 gcaattgaaa gcaacagttc gccgcaacta ctccagcccg ccgaatttgg gtgcgcaggt
    15901 ggtggctgca gtgctgaatg acgaggcatt gaaagccagc tggctggcgg aagtagaaga
    15961 gatgcgtact cgcattctgg caatgcgtca ggaattggtg aaggtattaa gcacagagat
    16021 gccagaacgc aatttcgatt atctgcttaa tcagcgcggc atgttcagtt ataccggttt
    16081 aagtgccgct caggttgacc gactacgtga agaatttggt gtctatctca tcgccagcgg
    16141 tcgcatgtgt gtcgccgggt taaatacggc aaatgtacaa cgtgtggcaa aggcgtttgc
    16201 tgcggtgatg taatgcagga aagcaggctg gagttaccca gcctgcagtg aaattaaact
    16261 gtcgtcgctt tcactatttc tttgtagatg atttttttga tgccgttgtt ctacgtgaga
    16321 gataataaaa cgttgtcagt tcttttattg ttaagtttat cccaattaac tggaattcct
    16381 t
//
LOCUS       DADMJE010000093        15959 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.094, whole genome shotgun sequence.
ACCESSION   DADMJE010000093 DADMJE010000000
VERSION     DADMJE010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15959)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15959)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15959
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.094"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            6..1241
                     /locus_tag="JN001_002600"
     CDS             6..1241
                     /locus_tag="JN001_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY9053790.1"
                     /translation="MSKLPTGVEIRGKYIRIWFMFRGKRCRETLKGWEITNSNIKKAG
                     NLRALIVHEISSGEFEYLRRFPQSSTGAKMVTTRVIKTFGELCDIWTKIKETELTTNT
                     MKKTKSQLKTLRIIICESTPISHIRYSDILNYRNELLHGETLYLDNPRSNKKGRTVRT
                     VDSYIALLCSLLRFAYQSGFISTKPFEGVKKLQRNRIKPDPLSKTEFNALMESEKGQS
                     QNLWKFAVYSGLRHGELAALAWEDVDFEKGIVNVRRNLTILDMFGPPKTNAGIRTVTL
                     LQPALEALKEQYKLTGHHRKSEITFYHREYGRTEKQKLHFVFMPRVCNEKQKPYYSVS
                     SLGARWNAAVKRAGIRRRNPYHTRHTFACWLLTAGANPAFIASQMGHETAQMVYEIYG
                     MWIDDMNDEQIAMLNARLS"
     gene            1293..2228
                     /gene="ttcA"
                     /locus_tag="JN001_002601"
     CDS             1293..2228
                     /gene="ttcA"
                     /locus_tag="JN001_002601"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiocytidine(32) synthetase TtcA"
                     /protein_id="HAY9053791.1"
                     /translation="MQENQQITKKEQYSLNKLQKRLRRNVGEAIADFNMIEEGDRIMV
                     CLSGGKDSYTMLEILRNLQQSAPINFSLVAVNLDQKQPGFPEHVLPVYLEKLGVEYKI
                     VEENTYGIVKEKIPEGKTTCSLCSRLRRGILYRTATELGATKIALGHHRDDILQTLFL
                     NMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREKDIQRFADAKAFPIIPCNLCGSQPN
                     LQRQVIADMLRDWDKRYPGRIETMFSAMQNVVPSHLCDTNLFDFKGITHGSEVVNGGD
                     LAFDREEIPLQPAGWQPEEDENQLDELRLNVVEVK"
     gene            complement(2357..3730)
                     /gene="dbpA"
                     /locus_tag="JN001_002602"
     CDS             complement(2357..3730)
                     /gene="dbpA"
                     /locus_tag="JN001_002602"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HAY9053792.1"
                     /translation="MTAFSTLNVLPPAQLTNLNELGYLTMTPVQAAALPAILAGKDVR
                     VQAKTGSGKTAAFGLGLLQQIDASLFQTQALVLCPTRELADQVAGELRRLARFLPNTK
                     ILTLCGGQPFGMQRDSLQHAPHIIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLD
                     MGFSDAIDDVIRFAPASRQTLLFSATWPEAIAVISGRVQRDPLAIEIDSTDALPPIEQ
                     QFYETSSKGKIPLLQRLLSLHQPSSCVVFCNTKKDCQAVCDALNEVGQSALSLHGDLE
                     QRDRDQTLVRFANGSARVLVATDVAARGLDIKSLELVVNFELAWDPEVHVHRIGRTAR
                     AGNSGLAISFCAPEEAQRANIISDMLQIKLNWQTPPANSSIVPLEAEMATLCIDGGKK
                     AKMRPGDVLGALTGDIGLDGADIGKIAVHPAHVYVAVRQAVAHKAWKQLQGGKIKGKT
                     CRVRLLK"
     gene            complement(4176..5159)
                     /gene="zntB"
                     /locus_tag="JN001_002603"
     CDS             complement(4176..5159)
                     /gene="zntB"
                     /locus_tag="JN001_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc transporter ZntB"
                     /protein_id="HAY9053793.1"
                     /translation="MEAIKGSDVNVPDAVFAWMLDGRGGVKPLENTDVIDEAHPCWLH
                     LNYVHHDSAQWLATTPLLPNNVRDALAGESTRPRVSRLGEGTLITLRCINGSTDERPD
                     QLVAMRVYMDGRLIVSTRQRKVLALDDVVSDLEEGTGPTDCGGWLVDVCDALTDHSSE
                     FIEQLHDKIIDLEDNLLDQQIPPRGFLALLRKQLIVMRRYMAPQRDVYARLASERLPW
                     MSDDQRRRMQDIADRLGRGLDEIDACIARTGVMADEIAQVMQENLARRTYTMSLMAMV
                     FLPSTFLTGLFGVNLGGIPGGGWQFGFSIFCILLVVLIGGVALWLHRSKWL"
     gene            5414..6646
                     /gene="dgcM"
                     /locus_tag="JN001_002604"
     CDS             5414..6646
                     /gene="dgcM"
                     /locus_tag="JN001_002604"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcM"
                     /protein_id="HAY9053794.1"
                     /translation="MITHNFNTLDLLTSPVWIVSPFEEQLIYANSAARLLMQDLTFSQ
                     LRTGPYSVSSQKELPKYLSDLQNQHDIIEILTVQRKEEETALSCRLVLRELTETEPVI
                     IFEGIEAPATLGLKASRSANYQRKKQGFYARFFLTNSAPMLLIDPSRDGQIVDANLAA
                     LNFYGYNHETMCQKHTWEINMLGRRVMPIMHEISHLPGGHKPLNFVHKLADGSTRHVQ
                     TYAGPIEIYGDKLMLCIVHDITEQKRLEEQLEHAAHHDAMTGLLNRRQFYHITEPGQM
                     QHLAIAQDYSLLLIDTDRFKHINDLYGHSKGDEVLCALARTLESCARKGDLVFRWGGE
                     EFVLLLPRTPLDTALSLAETIRVSVAKVSISSLPRFTVSIGVAHHEGNESIDELFKRV
                     DDALYRAKNDGRNRVLAA"
     gene            complement(6667..7230)
                     /gene="smrA"
                     /locus_tag="JN001_002605"
     CDS             complement(6667..7230)
                     /gene="smrA"
                     /locus_tag="JN001_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA endonuclease SmrA"
                     /protein_id="HAY9053795.1"
                     /translation="MNLDDKSLFLDAMEDVQPLKRATDVHWHPTRNQRAPQRIDTLQL
                     DNFLTTGFLDIIPLSQPLEFRREGLQHGVLDKLRSGKYPQQASLNLLRQPVEECRKMV
                     FSFIHQALADGLRNVLIIHGKGREDKSHANIVRSYVARWLTEFDDVQAYCTALPHHGG
                     SGACYVALRKTAQAKQENWERHAKRSR"
     gene            complement(7560..8468)
                     /locus_tag="JN001_002606"
     CDS             complement(7560..8468)
                     /locus_tag="JN001_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9053796.1"
                     /translation="MAFQVKIHQIRAFVEVARQGSIRGASRMLNMSQPALSKSIQELE
                     EGLAAQLFFRRSKGVTLTDAGESFYQHASLILEELRAAQEDIRQRQGQLAGQINIGMG
                     ASISRSLMPAVISRFHQQHPQVKVRIMEGQLVSMINELRQGELDFTINTYYQGPYDHE
                     FTFEKLLEKQFAIFCRPGHPAIGARSIKQLLDYSWTMPTPHGSYYKQLSELLDDQAQT
                     PQVGVVCETFSACISLVAKSDFLSILPEEMGCDPLHGQGLVMLPVSEILPKAAYYLIQ
                     RRDSRQTPLTPSLITQFRRECGYLQS"
     gene            8644..9944
                     /locus_tag="JN001_002607"
                     /pseudo
     CDS             8644..9944
                     /locus_tag="JN001_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415854.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="M20 family metallo-hydrolase"
     gene            9944..11389
                     /locus_tag="JN001_002608"
     CDS             9944..11389
                     /locus_tag="JN001_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HAY9053797.1"
                     /translation="MQEIYRFIDDAIEADRQRYTDIADQIWDHPETRFEEFWSAEHLA
                     SALESAGFTVTRNVGYIPNAFIASFGQGKPVIALLGEYDALAGLSQQAGCAQPTSVTP
                     GENGHGCGHNLLGTAAFAAAIAVKKWLEQYGQGGTVRFYGCPGEEGGSGKTFMVREGV
                     FDDVDAALTWHPEAFAGMFNTRTLANIQASWRFKGIAAHAANFPHLGRSALDAVTLMT
                     TGTNFLNEHIIEKARVHYAITNSGGISPNVVQAQAEVLYLIRAPEMTDVQHIYDRVAK
                     IAEGAALMTETTVECRFDKACSSYLPNRTLENAMYHALSHFGTPEWNSEELAFTKQIQ
                     ATLPPNDRQNSLNNIAATGGENGKAFALRHRETVLANEVAPYAATDNVLAASTDVGDV
                     SWKLPVAQCFSPCFAVGTPLHTWQLVSQGRTSIAHKGMLLAAKTMAATTLNLFIDSGL
                     LQECQQEHQQVTDTQPYHCPIPKNVTLSSLK"
     gene            11426..12952
                     /gene="abgT"
                     /locus_tag="JN001_002609"
                     /pseudo
     CDS             11426..12952
                     /gene="abgT"
                     /locus_tag="JN001_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415852.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="p-aminobenzoyl-glutamate transporter"
     gene            12963..13478
                     /gene="ogt"
                     /locus_tag="JN001_002610"
     CDS             12963..13478
                     /gene="ogt"
                     /locus_tag="JN001_002610"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HAY9053798.1"
                     /translation="MLRLLEEKIATPLGPLWVICDEQFRLRAVEWEEYSERMVQLLDI
                     HYRKEGYERISATNPGGLSDKLSDYFAGNLSIIDTLPTATGGTPFQREVWKTLRTIPC
                     GQVMHYGQLAEQLGRPGAARAVGAANGSNPISIVVPCHRVIGRNCTMTGYAGGVQRKE
                     WLLRHEGYLLL"
     gene            13673..14425
                     /locus_tag="JN001_002611"
     CDS             13673..14425
                     /locus_tag="JN001_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007849744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FNR family transcription factor"
                     /protein_id="HAY9053799.1"
                     /translation="MIPEKRIIRRIQSGGCAIHCQDCSISQLCIPFTLNEHELDQLDN
                     IIERKKPIQKGQTLFKAGDELKSLYAIRSGTIKSYTITEQGDEQITGFHLAGDLVGFD
                     AIGSGHHPSFAQALETSMVCEIPFETLDDLSGKMPNLRQQMMRLMSGEIKGDQDMILL
                     LSKKNAEERLAAFIYNLSRRFAQRGFSPREFRLTMTRGDIGNYLGLTVETISRLLGRF
                     QKSGMLAVKGKYITIENNDALAQLAGHTRNVA"
     gene            14577..15527
                     /gene="uspE"
                     /locus_tag="JN001_002612"
     CDS             14577..15527
                     /gene="uspE"
                     /locus_tag="JN001_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspE"
                     /protein_id="HAY9053800.1"
                     /translation="MAMYQNMLVVIDPNQDDQPALRRAVYLHQRIGGKIKAFLPIYDF
                     SYEMTTLLSPDERTAMRQGVISQRTAWIHEQAKYYLNAGVPIEIKVVWHNRPFEAIIQ
                     EVISGGHDLVLKMAHQHDRLEAVIFTPTDWHLLRKCPSPVWMVKDQPWPEGGKALVAV
                     NLASEEPYHNALNEKLVKETIELAEQVNHTEVHLVGAYPVTPINIAIELPEFEPSVYN
                     DAIRGQHLLAMKALRQKFGINENMTHVEKGLPEEVIPDLAEHLQAGIVVLGTVGRTGI
                     SAAFLGNTAEQVIDHLRCDLLVIKPDQYQTPVELDDEEDD"
     gene            complement(15577..15835)
                     /locus_tag="JN001_002613"
                     /pseudo
     CDS             complement(15577..15835)
                     /locus_tag="JN001_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309940.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2534 family protein"
BASE COUNT         4137 a         3949 c         3911 g         3962 t
ORIGIN      
        1 atgatatgtc taaattacca acaggtgtcg agattcgagg taaatacatt cgcatctggt
       61 tcatgtttcg aggaaaacga tgtcgggaaa cattgaaagg ctgggagatt actaacagta
      121 acattaaaaa ggccgggaat ttaagagcgt tgatagttca tgaaatcagt tccggtgaat
      181 ttgagtattt aagacgtttt ccccagtcca gcactggggc aaaaatggtg acaacgaggg
      241 tcataaaaac attcggggag ctttgtgata tctggacaaa aattaaagag acagagttaa
      301 caacaaacac aatgaagaaa acgaaatcac aattaaaaac actcaggata ataatttgtg
      361 agagtacccc gatatcgcat attcgttata gcgatatctt aaactaccgg aatgaactgc
      421 tgcatggaga aacgctttac ctagataatc caagatccaa caaaaaagga agaaccgtgc
      481 gcacagttga tagctatatc gccctgctct gttcgttgtt acgttttgcg tatcagtcgg
      541 gatttatatc aaccaaacca tttgaaggag taaaaaaatt acagcgaaac agaataaaac
      601 ctgacccgtt atctaaaaca gaattcaatg cattaatgga aagtgaaaaa ggacagagcc
      661 aaaacttgtg gaaatttgcc gtttactccg ggcttcgtca cggggaactg gcagctctgg
      721 cgtgggagga tgtggatttc gagaagggaa ttgtgaatgt cagaagaaac ctgacgatac
      781 ttgatatgtt cggtccccca aaaacaaatg ccgggatccg gacggtaaca ttactgcagc
      841 cggctcttga agcactgaag gagcaataca aactgaccgg gcatcatcgc aaaagcgaaa
      901 tcacttttta tcatcgggag tacggcagaa ctgaaaagca aaaactgcat tttgttttca
      961 tgcccagggt gtgtaacgaa aaacagaaac cttattactc ggtaagcagt ttgggtgcaa
     1021 gatggaatgc agcagtaaaa cgtgctggta ttcgccgccg taatccgtac catacgcgac
     1081 atacttttgc ctgctggctg ttgacggcag gagcgaaccc ggcatttata gccagccaga
     1141 tggggcatga aactgcgcaa atggtgtatg aaatttacgg tatgtggatt gatgacatga
     1201 acgacgaaca gatagccatg ttgaatgcgc ggttatcgta gttgcaaagt ttgcccccaa
     1261 tttgccccat ttagtaccag agaactgaaa taatgcaaga aaatcaacaa attacaaaga
     1321 aagaacaata cagcctgaac aaattacaaa aacgtctacg tcgtaacgtg ggcgaagcca
     1381 ttgctgactt caatatgatt gaagaaggcg atcgcatcat ggtttgcctc tcagggggta
     1441 aagacagcta taccatgctg gagattctgc gcaatttgca gcaaagcgcg ccaatcaatt
     1501 tttcgctggt ggctgttaac ctcgatcaaa agcaaccggg cttcccagaa cacgttctgc
     1561 ccgtgtatct tgaaaagctg ggcgttgagt acaagattgt cgaagagaac acttacggta
     1621 tcgtgaaaga gaagattcca gagggcaaaa ccacttgctc actgtgttct cgccttcgtc
     1681 gcggtatcct ttatcgtacc gcaacggaac tgggggcgac gaagatcgcg ctgggtcacc
     1741 atcgtgacga tatcctgcag acgttgttct taaatatgtt ctacggcggc aagatgaaag
     1801 gtatgcctcc gaaactgatg agcgatgatg gcaaacatat cgttattcgt ccgctggcct
     1861 actgccgcga gaaagatatt cagcgatttg ccgatgcaaa agcgttcccg attattccgt
     1921 gcaacctgtg cggttcacag cctaacctgc aacgtcaggt gattgctgac atgttgcgtg
     1981 actgggataa acgttatcca gggcgtatcg agacgatgtt cagcgcgatg cagaatgtgg
     2041 tgccgtcgca tctgtgcgat accaacctgt tcgatttcaa aggcatcacc cacggttctg
     2101 aagtggttaa cgggggtgat ctggcgtttg atcgcgaaga gatcccacta caaccggcgg
     2161 gctggcagcc agaagaagat gaaaatcagt tggatgagtt acggctgaat gtggttgaag
     2221 tgaaataacc aggatagcgc ccgatgcgca agcgtatcgg gctactctta tggaggccgg
     2281 ataagacgcg gccaacgtcg catccggcaa tgccgaagaa gatgtttact cttgcacccg
     2341 gcaattcaac atttcattat tttaataacc gcacccggca cgtttttcct ttaatcttcc
     2401 cgccctgtaa ctgtttccat gctttatgag caacagcctg acggaccgcg acatagacat
     2461 gcgccggatg cacggcgatt ttgccaatat ctgcgccatc aagcccgata tctcctgtca
     2521 gtgcacctaa tacatcaccc gggcgcattt tggctttttt cccgccatcg atacacaacg
     2581 ttgccatttc tgcttccagc ggcacaatgg aactattagc tggcggcgtt tgccagttaa
     2641 gttttatctg caacatgtca gaaatgatat tggcccgctg tgcttcttcc ggagcacaga
     2701 aactgatcgc cagaccgcta tttcctgcac gagctgtacg gccgatgcga tgtacatgaa
     2761 cttcagggtc ccacgccagc tcaaagttca ccaccagctc aagcgattta atatccagac
     2821 cacgcgcagc aacatcagtc gcaaccagta cacgggcgct accgttagca aaacgtacca
     2881 gggtctgatc gcgatcgcgt tgctccaaat cgccgtgtaa tgacaatgca ctttgcccta
     2941 cttcattcag cgcgtcgcag acagcctggc aatctttttt ggtattgcaa aacaccacgc
     3001 aagaggatgg ctgatgcaag cttaataacc gttgcaacag aggaattttg cctttgctgg
     3061 atgtctcata aaattgttgt tcaatgggtg gcaaagcatc tgttgagtca atttcaatcg
     3121 ccaaaggatc gcgttgcact cgtccgctga ttacggcgat ggcttccggc caggttgccg
     3181 aaaacagaag cgtctgtcga gatgcaggcg caaaacggat gacatcatca atggcatcgc
     3241 taaatcccat atccagcatg cggtcggcct catccatcac caaagtattc agcgcatcca
     3301 gtgataccgt gcctttttgc aagtgatcca gcaaacgacc cggcgttgcc acgataatat
     3361 gcggcgcatg ttgcaacgaa tcacgctgca taccgaacgg ttgaccaccg cacaacgtca
     3421 aaattttggt atttggcaga aaacgcgcca gccgacgcaa ttcacctgcc acctgatccg
     3481 ccagttcacg cgtaggacac agcactaaag cctgggtttg aaatagcgac gcatcaattt
     3541 gctgtaacaa gccgaggcca aaagccgccg ttttgccgct gccggttttc gcctgcacgc
     3601 gaacatcttt tccggcaagg atcgccggaa gcgcggcggc ctgcaccggc gtcatagtta
     3661 aataacccaa ctcattaagg ttcgtgagtt gggcgggagg caaaacattc agggtagaaa
     3721 aagcggtcac aatctattct cgtggtcatc gacgcaaagt tagcaggcgc gtatcctcgc
     3781 agatctacgc gagtggtggg tcaggcatgg gttgcgggcg agggatcgga tcgggcactg
     3841 gaacaggatc gccaggaatc ggttcaggga caggaatttg caaataaata agtgtcgtca
     3901 tatttccctc cggtcattgg gtggactctt aaagggtaga cgctgataaa taacaggcaa
     3961 aaaaaagccg actcatcaaa gtcggcgtcg tacgaatcaa ttgtgctatg cagtaattca
     4021 aaaaaggaag taagacaata tggagcgcaa cgcccatcgc ttgacgttgc attcacctgc
     4081 aagggagata ttgccctgaa tgggtagaga gtttattgac ttcgctcaaa ctttgcggcg
     4141 tttttgtata cagacagccg gaaaaattgc ttttgttaca accatttact acgatgcaac
     4201 cataaagcaa caccaccaat aagaacaact aacagaatac aaaaaattga aaatccgaat
     4261 tgccacccgc cgccagggat cccaccaagg ttgacgccaa ataaccctgt cagaaaggta
     4321 ctgggtaaaa agaccattgc catcaatgac attgtatagg tacgacgagc taaattttcc
     4381 tgcatcacct gagcgatttc atccgccatc acgccagtcc gtgctataca ggcgtcgatt
     4441 tcgtcaagac cgcgcccaag gcgatcggca atatcctgca tccgacggcg ttggtcatcg
     4501 ctcatccacg gcaaacgttc actggcaaga cgagcataaa catcacgttg cggtgccata
     4561 tagcgacgca tcacgattaa ttgtttgcgc agcagagcca ggaatccacg cggtggaatt
     4621 tgctgatcaa ggagattatc ttcaaggtcg ataattttat cgtgcagctg ctcgataaat
     4681 tcgctggaat gatcggtcaa cgcatcgcac acatccacca gccaccctcc gcaatcggtc
     4741 ggacccgtgc cctcttccag atcgctcacc acatcgtcca gcgccagcac tttgcgttgt
     4801 cgggtcgaaa caattaaccg cccgtccata tatacacgca tggcgaccag ttgatcgggg
     4861 cgttcatcgg tgctgccgtt tatacagcgc aatgtaatca gcgtgccttc accgagacgg
     4921 ctgactcggg gccgtgtgct ctcgcctgcc agcgcatcac gtacgttatt gggaagcagc
     4981 ggtgttgtcg ccagccattg ggcgctatca tggtgtacat aattaaggtg gagccagcag
     5041 ggatgcgctt catcaatcac atctgtattt tccagcggtt taacgccgcc tctaccatcc
     5101 agcatccagg caaatactgc atccgggaca ttaacgtccg atcccttaat cgcttccaca
     5161 gtgcctccat catcaacgca ttattttgta gtctagcctt ctggccctgt tacgcaacat
     5221 ctcatcaccc cattaccctg aaatgattaa taaaattctg tctaaattga atacaaaaag
     5281 caaaatgctt ttccgtatac aaaccgtgtg aagtgttaaa tagcgtctat cattatcaga
     5341 attatctgat catatgacgt ggcttttttg cgatcggata gcaacaaaaa ttgataaaaa
     5401 taacgggatc tcaatgatta cgcacaactt caataccctg gacttactca ccagtcctgt
     5461 ctggattgtt tcgccctttg aggaacagtt aatttatgcc aatagcgcgg cgcgactgtt
     5521 gatgcaagac ctcacgttta gtcagctacg aaccggaccc tattccgtct cctcacaaaa
     5581 agaactgccg aaatacctct ccgatctgca aaaccaacac gatattatcg aaatcctcac
     5641 tgttcagcgt aaagaagagg aaacagcatt aagctgtcgg cttgttttgc gagagctgac
     5701 agaaacagaa ccggtgatta ttttcgaagg tatcgaagcg ccggcaacgc tgggtttaaa
     5761 agccagtcgc tcggcaaatt atcagcgcaa aaaacaaggt ttttatgcgc gcttttttct
     5821 gactaactct gcaccaatgt tgttgattga cccctcacga gatggccaaa tcgtcgatgc
     5881 taacctcgcc gcgctcaatt tctacggtta taaccatgaa acgatgtgcc aaaaacatac
     5941 ctgggaaatt aatatgctcg ggcgtcgcgt catgcctatc atgcatgaaa tttcgcattt
     6001 acccggcggt cataaacctt tgaattttgt tcataaactg gcggatggat ctactcgtca
     6061 tgtgcagacc tatgccgggc cgattgaaat ttatggcgac aagctcatgt tatgtattgt
     6121 gcatgatatt actgagcaaa aacggctgga ggagcagctg gaacatgctg ctcaccatga
     6181 cgcgatgacc ggattactga atcggcgaca gttttatcac attacggaac caggccaaat
     6241 gcagcacctc gccatcgccc aggattacag cttgttgctc atcgacaccg atcgttttaa
     6301 acacattaac gatctctatg ggcattctaa aggtgatgag gtgttatgcg ccctcgcccg
     6361 caccctcgaa agttgcgctc gcaaaggcga tttggtgttt cgttggggag gcgaagagtt
     6421 tgtcttattg ctaccaagaa ccccactgga taccgcgctt tcgctggctg aaactatccg
     6481 tgtaagcgtg gccaaagtga gtatttcgag cttaccacgt tttaccgtca gcattggtgt
     6541 ggcgcatcac gaaggaaatg aaagcatcga tgaactgttt aaacgcgttg atgatgcttt
     6601 gtatcgggcg aaaaatgatg gacgcaaccg cgtgctggcg gcataagccg cggatgcgtc
     6661 tcgagatcaa cggctgcgct tagcgtggcg ctcccagttt tcttgcttcg cctgcgccgt
     6721 tttacgtagt gcgacgtaac acgccccgct gccgccatga tgcggtagcg cggtgcaata
     6781 tgcctgaaca tcatcaaatt cggtcagcca gcgcgccaca tagctgcgga caatattggc
     6841 atgcgattta tcttcccgcc ctttaccatg aataatcagc acattacgca aaccatccgc
     6901 cagggcttgg tgaatgaaac tgaacaccat tttgcggcac tcttccaccg gctggcgcaa
     6961 aagattcagg ctcgcctgtt gcggatattt accactgcgc agcttatcca gcaccccatg
     7021 ttgcaaccct tcccgccgaa actccagcgg ctgacttagc gggatgatgt cgagaaatcc
     7081 ggtggtgagg aaattatcaa gctgcagcgt gtcgatacgc tgcggcgcac gttggttacg
     7141 cgttggatgc cagtggacat ctgtagcacg tttcagcggc tggacatctt ccatggcgtc
     7201 aagaaacagc gatttgtcgt caaggttcat gttacatcct cccgcaatta agagcgcgat
     7261 atgataacca gaccgggtcg gtccaacaac gtattaccaa aaattccagt aataagttcc
     7321 aaatattgcc gatattttaa gcaaaatgct tatgcatgat tattcattca cgatattaat
     7381 aatgtaactt atattttcgt gaaatctgtc actgaagaaa attggcaact aaaggttaaa
     7441 accgttataa cacagtcacc ggcgcagagg agacaatgcc ggacttaaga cgcggatgca
     7501 ctgctgtgtg tactgtagag tctggcggat gtcgacagac tctatttttt tatgcagttt
     7561 taactttgca gatagccgca ttctcgccgg aattgcgtga ttaatgacgg ggtcagtggt
     7621 gtctggcgac tatcacgccg ctgaatcaaa taataggccg ctttcggtaa aatttcgcta
     7681 accggcaaca tcaccagccc ctgtccgtgc aagggatcgc agcccatttc ttcaggcagt
     7741 atgctgagaa aatcgctttt tgccaccaga ctgatacagg ctgagaacgt ctcgcagact
     7801 acaccgacct gtggcgtttg cgcctgatcg tcaagcaatt cactcaactg tttgtagtaa
     7861 ctgccgtgtg gcgtcggcat tgtccagctg taatccagta actgtttgat cgaacgggca
     7921 ccaatggcgg ggtgtcccgg gcggcaaaag atcgcgaatt gcttttccag taatttctca
     7981 aaagtaaatt cgtggtcgta cggtccctga taataggtat tgatggtgaa atccaattct
     8041 ccctgacgca attcattaat catcgacacc agttgccctt ccataatgcg tacttttacc
     8101 tgcggatgct gctgatgaaa acgagatatg acagctggca tcagactgcg ggaaatactg
     8161 gcccccatgc cgatattaat ctgccctgcc agttgccctt gtcgttggcg aatatcctct
     8221 tgggctgcgc gcagctcttc aagaataaga ctggcgtgct gataaaaact ttcaccggca
     8281 tcagttaacg tcacgccttt actacggcga aaaaagagtt gcgccgctaa tccttcttcc
     8341 aactcctgaa tagatttact cagtgccggt tgcgacatat tcaacattcg gctcgctccg
     8401 cgaatgctgc cctgacgagc cacttcaaca aaagcacgaa tttgatgaat ttttacctga
     8461 aaagccatga cgccaccgat aaccgttatt tatcagacca aagaaactgg catctacttt
     8521 aatgcagatg attgtgtcag ggtaatttat gaacggttaa aactgtgaaa aatcagttag
     8581 tgataagtaa aaactatcgc tacgtgaacc gggtcacact ttttactgat gacgggaaag
     8641 gttatggagt ctttgaatca atttgttaat tcgcttgccc caaaattatc gcactggcga
     8701 cgtgattttc atcactatgc agagtctggc tgggtggaat tccgcactgc cacccttgtt
     8761 gcggaagaat tgcagcagct cggctattca ctggcgctgg gccgcgaagt agttaatgaa
     8821 agtagccgga tgggactacc tgatgaactc actctacaac gcgaattcga gcgcgctcgt
     8881 caacagggtg cgctagcaca atggattgcg gtttttgaag gtggtttcac tggtatcgtc
     8941 gccaccctgg ataccggtcg ccccggtccg gtgatggctt tccgtgtcga tatggacgcg
     9001 ctggatctca gtgaagagca ggatgtcagc catcgcccct accgcgacgg ttttgcgtca
     9061 tgtaacgccg gaatgatgca tgcctgtggt catgatggac ataccgccat tgggcttggg
     9121 ctagcgcata cccttaaaca attcgagtcc ggactacatg gcgtcatcaa actgattttt
     9181 cagcctgcag aggaaggtac gcgtggcgcg cgggcgatgg tcgatgcagg tgtcgtagat
     9241 gatgttgatt attttactgc cgtgcacatt ggcactggcg tacctgcggg caccgtggtg
     9301 tgcggcagtg ataattttat ggcaaccacc aaatttgacg cgcacttcac cggtaccgcc
     9361 gctcacgcag gcgcaaaacc agaagacggt cacaatgcct tgttggcggc agcacaagcc
     9421 actcttgcac tgcatgcaat cgccccggag cttccagagt aaacgtgggc gttatgcagg
     9481 caggaagcgg tcgtaacgtt gttcctgcct cggcgttgct gaaagtggaa acacgcgggg
     9541 ccagcgacgt cattaatcaa tatgtttttg accgtgcaca acaagcgatt cagggcgcag
     9601 caaccatgta tggtgtcggc gttgaaactc gtctgatggg tgcagctacc gccagttctc
     9661 cttcgccgca atgggtcgca tggttgcaaa gtcaggcggc tcaggtcgcg gggggcaatc
     9721 aggccattga acgtgttgaa gcgcctgcgg gttccgaaga tgccacatta atgatggccc
     9781 gcgtgcagca acatcaaggg caagcctcct acgtggtgtt tggcacacag ctggcggcag
     9841 gtcatcacaa cgaaaaattc gattttgacg agcaggttct cgctattgcc gtcgaaacgc
     9901 tggcgcgcac cgcgctcaat tttccctgga cgcgaggtat ctgatgcagg aaatctatcg
     9961 ttttatcgac gatgcgattg aagccgatcg ccaacgttat accgatattg ccgatcaaat
    10021 ctgggatcat ccagaaacac gttttgaaga gttctggtca gcggagcatc tggcttcggc
    10081 gctggaatct gcaggcttca ccgttacccg caacgtaggc tatatcccaa atgcctttat
    10141 tgcttcgttt ggtcaaggca aaccggttat cgccctgctg ggagaatatg acgccctggc
    10201 aggtttaagt cagcaagcag gttgcgcgca acctacatcc gtgacgcccg gtgaaaatgg
    10261 tcacggttgc ggacacaatt tgctgggaac cgccgccttt gccgctgcaa tagccgtcaa
    10321 gaaatggctg gaacaatatg ggcaaggcgg cacggtgcgc ttttatggtt gtcctggcga
    10381 agaaggcggc tcgggtaaaa cgttcatggt tcgcgagggg gtatttgatg atgtggatgc
    10441 ggcactcact tggcacccgg aagcctttgc cggtatgttc aatacccgca cgctggcaaa
    10501 cattcaggca tcatggcgct ttaaagggat cgcagcacat gccgcgaatt tccctcattt
    10561 gggacgcagc gcccttgatg ccgtaacgtt gatgaccact ggcaccaact tcctcaacga
    10621 acatattatt gaaaaagcgc gcgtacacta tgccatcaca aatagcggcg ggatctcgcc
    10681 caacgtggtc caggcgcagg cagaagtgct ttatcttatc cgcgcccccg aaatgaccga
    10741 cgtgcagcat atttatgatc gggtcgccaa aatcgccgaa ggtgcggcat tgatgaccga
    10801 aaccacggtt gaatgccgct tcgacaaagc ctgttccagt tatctcccga atcgcacctt
    10861 agaaaatgcc atgtaccatg ccctatccca ttttggtacc ccggaatgga actccgaaga
    10921 actggctttt acgaaacaaa ttcaggctac gctccccccc aacgatcggc aaaacagtct
    10981 gaataatatc gccgcaaccg gtggcgaaaa cggcaaggct tttgcactac gtcatcgtga
    11041 aacggtactg gcgaatgagg tcgctccata tgccgccacc gataacgtgc ttgcggcatc
    11101 gactgatgtc ggcgacgtca gttggaaact gcctgttgcc cagtgtttca gcccctgttt
    11161 tgccgtcggt acaccgctac atacgtggca actggttagc caggggcgaa catctattgc
    11221 tcataaagga atgctgctgg cggcgaaaac tatggcagca accacactca atctcttcat
    11281 tgattcaggg ctattgcaag aatgccaaca agagcatcag caagttacgg acacgcaacc
    11341 gtatcactgc cctatcccaa aaaacgtgac actgtcatct ttaaaataac aacaacaacg
    11401 caaacacaac aaccgaggaa tgcccatgag tatgtcatcc ataccgtcgt cctcctaatc
    11461 cgggaagctc tatggctggg tcgaaagaat tggtaacaag gttccccatc cttttttgct
    11521 ctttatctat ttgattatcg tactcatggt gacgacggca attttgtcgg cctttggcgt
    11581 cagtgcgaaa aacccgaccg atggaacgcc ggtggtggtg aaaaacctgc tcagtgtgga
    11641 aggattacac tggtttttac ccaatgttat taaaaacttt agcggttttg ctccacttgg
    11701 tgcgatcctg gcgctggttt taggtgccgg tctggcggag cgcgtcggct tactgccagc
    11761 gctaatggtt aaaatggcat cgcatgttaa tgtccgctac gccagttata tggtgctgtt
    11821 tattgctttt ttcagccaca tttcttccga tgcggcgtta gtgatcatgc caccgatggg
    11881 tgcgctgatt tttctggcgg tgggcaggca tccagttgca ggtttactgg ctgccattgc
    11941 aggcgtaggt tgcggcttta cggctaattt actgattgtc acaaccgacg tgttgctgtc
    12001 ggggatccgc acggaagcgg cggctgcgtt caatccgcaa atgcacgtca gtgtaattga
    12061 taactggtat tttatggcca gctccgtagt cgtactgacg attgttggcg gcctgataac
    12121 cgacaaaatc atcgagccac ggttaggtca atggcaggga aacagcgatg agaaactgca
    12181 gacattgacc gaaagtcagc gttttggttt acgcatagca ggtgtcgtat cgctactttt
    12241 tattgctgcg atcgcgctga tggtgatccc ggaaaacggg atattgcgcg atccgattaa
    12301 tcacaccgtg atgccatcac cctttattaa aggtatcgtg ccactaatca ttcttttttt
    12361 ctttgtggtt tcgctggctt atggcatcgc tacccgcaca attcgacatc aggcggattt
    12421 accgcattta atgattgaac cgatgaaaga gatggcggga tttatcgtga tggtttttcc
    12481 cctcgcccag tttgtcgcca tgtttaactg gagcaacatg gggaaattca tcgccgtggg
    12541 gctgaccgat atactggaaa gttcagggct tagcggcatc ccggcgtttg tcggtctggc
    12601 gttgctttcc tctttcttat gcatgtttat tgccagtggt tccgcaatct ggtcgattct
    12661 ggcccccatt ttcgtaccaa tgtttatgct acttggcttt cacccggcat ttgcgcaaat
    12721 cctctttcgt attgccgact catccgtatt gcctttagcg ccggtatctc cttttgttcc
    12781 actgtttctt ggattcctgc aacgctacaa accagacgcg aaactgggta cttactattc
    12841 gttagtcttg ccctatccgc ttatcttttt ggtggtatgg ctgctgatgt tgctggcgtg
    12901 gtatcttgtt ggtctgccga taggtccggg gatttaccca cgtttgtctt aagagagaac
    12961 ggatgctgag attacttgaa gaaaaaattg ccacgccact gggtccactg tgggtgattt
    13021 gcgatgagca atttcgcctg cgggcggttg aatgggaaga gtacagcgaa cgcatggtgc
    13081 agctgctgga catccattat cgcaaagaag gctatgagcg catttctgcc accaacccag
    13141 gcggtttaag cgacaagctt agtgattatt ttgccggtaa tcttagcatt attgatacgc
    13201 ttcccactgc cacagggggg acgccatttc agcgcgaagt ctggaaaact ctacgcacta
    13261 tcccctgcgg gcaggtaatg cattacggcc aactggctga acaattgggc cgccctggcg
    13321 cggcgcgtgc cgttggtgcg gcaaacggat cgaatcccat cagcatcgtc gtaccttgcc
    13381 atcgggttat tggccgaaac tgcaccatga ccggatatgc aggcggagtt cagcgaaaag
    13441 agtggttatt gcgccacgaa ggttatcttt tgctgtaaac attaaacaat ttgtgccagc
    13501 ttgttcacac ttttatgtaa agttaccctt aacaacttaa tggttttcaa atagatagac
    13561 atatatttac atctaatatc ggaattctct gctgttaagg tttgcttaga cttacttgct
    13621 ccctaaaaag atgttaaaat tgacaaatat caattacggc ttgagcagac ctatgatccc
    13681 ggaaaagcga attatacggc gcattcagtc tggcggttgt gctatccatt gccaggattg
    13741 cagcatcagc cagctttgca tcccgttcac actcaacgaa catgagcttg atcagcttga
    13801 taatatcatt gagcggaaga agcctattca gaaaggccag acgctgttta aggctggtga
    13861 tgaacttaaa tcgctttatg ccatccgctc cggtacgatt aaaagttata ccatcactga
    13921 gcaaggcgac gagcaaatca ctggtttcca tttagctggc gacctggtgg gatttgacgc
    13981 catcggcagc ggccatcacc cgagcttcgc tcaggcgctg gaaacctcga tggtatgtga
    14041 aatcccgttc gaaacgctgg acgatttgtc cggtaaaatg ccgaatctgc gtcagcagat
    14101 gatgcgtctg atgagcggtg aaatcaaagg cgatcaggac atgatcctgc tgttgtcgaa
    14161 gaaaaatgcc gaggaacgtc tggctgcatt catctacaac ctgtcccgtc gttttgccca
    14221 acgcggcttc tcccctcgtg aattccgcct gacgatgact cgtggcgata tcggtaacta
    14281 tctgggcctg acggtagaaa ccatcagccg tctgctaggt cgcttccaga aaagcggtat
    14341 gctggcagtc aaaggtaaat acatcaccat cgaaaataac gatgcgctgg cccagcttgc
    14401 tggtcatacg cgtaatgttg cctgattttt ccgcataact cactatcctt ctgtcatatc
    14461 attaaatttt tctgatttat tgatctggca gaaggttcat cactgtttca ttcaccagat
    14521 atgggttaat cttttaatta caaactgcgt tgacagttgt tgtaaggaga ccctgtatgg
    14581 ctatgtatca gaacatgctc gttgttatcg atcctaacca ggacgaccaa ccagcattgc
    14641 ggcgagctgt ttatttacat caacggattg gtggcaaaat taaagccttt ttgccgatct
    14701 atgacttctc atacgaaatg accaccctgc tctccccgga cgaacgtacc gctatgcgtc
    14761 agggcgtcat cagccagcgt acagcctgga tccacgagca ggcaaaatat tatctcaatg
    14821 ctggcgttcc cattgaaatt aaagtggtct ggcataaccg tcctttcgaa gccatcattc
    14881 aggaagtgat cagcggcggg cacgatttgg tgctaaaaat ggcgcaccaa catgaccgtc
    14941 tggaagcggt gatttttacg ccaacggact ggcatctgtt acgcaaatgc ccaagcccgg
    15001 tgtggatggt gaaagaccag ccgtggccgg aaggaggtaa ggcgctggtg gcggtgaatc
    15061 tcgccagtga agagccgtat cataatgcgc tcaatgaaaa actggtcaaa gagacgatcg
    15121 aactggcaga acaagtcaac cataccgaag ttcatctggt tggcgcttac ccagtaacgc
    15181 caattaatat cgcgattgaa ctgccggaat ttgagccgag cgtttataac gatgccattc
    15241 gtgggcaaca tttgctggca atgaaagccc tgcggcagaa attcggcatt aatgaaaaca
    15301 tgacgcacgt agaaaaaggt ctgcccgaag aggttattcc tgatttggcg gagcacttac
    15361 aggcggggat tgtggttctg ggcacggtag gacgcaccgg tatttcagca gcattcctcg
    15421 gcaacacggc ggaacaggtg attgatcatc ttcgctgcga tctgttggtc attaaacctg
    15481 accagtatca gacacccgtt gaactggatg acgaagaaga cgattaacga ctcttcaata
    15541 actgacaagg cccgagttat cgggcctatt ttttacttac tgctcttcgc cgccaaggaa
    15601 ataaattccc aacgggattg ccagcaacac agtaaagacc aggctataaa caaaaatcat
    15661 cgatgactga atcacataca ttgatgtcgt ccactcagac agcggaatat tgtactgttc
    15721 tataacgccg ccgatagtcg cgcgagtcac aaccgacgcc gcaataatga caaaccgcca
    15781 acaaaccaaa gagaaatttc ttccctttcg ctgacttcag tttcgccata atcatgatgt
    15841 aatccttgtg cagacaaatt tcttgttacc taaacgtaac aataccatga catttcaccg
    15901 ttgtctgctc tgaaaacctc acctcttagc tggatttaca atcaacgcat tgattagtt
//
LOCUS       DADMJE010000094        15895 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.095, whole genome shotgun sequence.
ACCESSION   DADMJE010000094 DADMJE010000000
VERSION     DADMJE010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15895
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.095"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..105)
                     /locus_tag="JN001_002614"
     CDS             complement(<1..105)
                     /locus_tag="JN001_002614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001373091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9053801.1"
                     /translation="MEQKALSAEPRRSFSNEFKLQMVKLASQPGASVAR"
     gene            193..504
                     /locus_tag="JN001_002615"
                     /pseudo
     CDS             193..504
                     /locus_tag="JN001_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417302.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase-dependent protein"
     gene            501..908
                     /locus_tag="JN001_002616"
     CDS             501..908
                     /locus_tag="JN001_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2509 family protein"
                     /protein_id="HAY9053802.1"
                     /translation="MNREKGVSSLALVLMLLVLGSLLLQGMSQQDRSFASRVSMESQS
                     LRRQAIVQSALAWGKMHSWQTQPAVQCSQYAETDAQVCLRLLADNEALLIAGYEGVSL
                     WRTGEVIDGNIVFSPSGWSDFCPLKERALCQLP"
     gene            893..1216
                     /locus_tag="JN001_002617"
     CDS             893..1216
                     /locus_tag="JN001_002617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HAY9053803.1"
                     /translation="MSASLKNQQGFSLPEVMLAMVLMVMIVTALSGFQRTLMNSLASR
                     NQYQQLWRHGWQQTQLRAISPPANWQVNRLQTSQAGCVSISVTLVSPGGREGEMTRLH
                     CPNRQ"
     gene            1229..4597
                     /gene="recC"
                     /locus_tag="JN001_002618"
     CDS             1229..4597
                     /gene="recC"
                     /locus_tag="JN001_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit gamma"
                     /protein_id="HAY9053804.1"
                     /translation="MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQ
                     WLQMTLSQKFGIAANIDFPLPASFIWDMFVRVLPEIPKESAFNKQSMSWKLMTLLPQL
                     LEHEDFTLLRHYLTDDSDKRKLFQLSSKAADLFDQYLVYRPEWLAQWETGHLVEGLGE
                     AQAWQAPLWKALVEYTHELGQPRWHRANLYQRFIETLESATTCPPGLPSRVFICGISA
                     LPPVYLQALQALGKHIEIHLLFTNPCRYYWGDIKDPAYLAKLLTRQRRHSFEDRELPL
                     FRDSENAGQLFNSDGEQDVGNPLLASWGKLGRDYIYLLSDLESSQELDAFVDVTPDNL
                     LHNIQSDILELENRAVAGVNIEEFSRSDNKRPLDPLDSSITFHVCHSPQREVEVLHDR
                     LLAMLEEDPTLTPRDIIVMVADIDSYSPFIQAVFGSAPADRYLPYAISDRRARQSHPV
                     LEAFISLLSLPDSRFVSEDVLALLDVPVLAARFDITEEGLRYLRLWVNESGIRWGIDD
                     DNVRELELPATGQHTWRFGLTRMLLGYAMESAQGEWQSVLPYDESSGLIAELVGHLAS
                     LLMQLNIWRRGLAQERPLEEWLPVCRDMLNAFFLPDAETEAAMTLIEQQWQAIIAEGL
                     GAQYGDAVPLSLLRDELAQRLDQERISQRFLAGPVNICTLMPMRSIPFKVVCLLGMND
                     GVYPRQLAPLGFDLMSQKPKRGDRSRRDDDRYLFLEALISAQQKLYISYIGLSIQDNS
                     ERFPSVLVQELIDYIGQSHYLPGDEALNCDESEARVKAHLTCLHTRMPFDPQNYQPGE
                     RQSYAREWLPAASQAGKAHSEFVQPLPFTLPETVPLETLQRFWAHPVRAFFQMRLQVN
                     FRTEDSEIPDTEPFILEGLSRYQINQQLLNALVEQDDAERLFRRFRAAGDLPYGAFGE
                     IFWETQCQEMQQLADRVIACRQPGQSMEIDLACNGVQITGWLPQVQPDGLLRWRPSLL
                     SVAQGMQLWLEHLVYCASGGNGESRLFLRKDGEWRFPPLAAEQALHYLSQLIEGYREG
                     MSAPLLVLPESGGAWLKTCYDAQNDAMLDDDSTLQKARTKFLQAYEGNMMVRGEGDNI
                     WYQRLWRQLTPETMEAIVEQSQRFLLPLFRFNQS"
     gene            4773..7661
                     /gene="ptrA"
                     /locus_tag="JN001_002619"
     CDS             4773..7661
                     /gene="ptrA"
                     /locus_tag="JN001_002619"
                     /EC_number="3.4.24.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin"
                     /protein_id="HAY9053805.1"
                     /translation="MPRSTWFKALLLLVALWAPLSQAETGWQPIQETIRKSDKDNRQY
                     QAIRLDNGMVVLLVSDPQAVKSLSALVVPVGSLEDPEAYQGLAHYLEHMSLMGSKKYP
                     QADSLAEYLKMHGGSHNASTAPYRTAFYLEVENDALPGAVDRLADAIAEPLLDKKYAE
                     RERNAVNAELTMARTRDGMRMAQVSAETINPAHPGSKFSGGNLETLSDKPGNPVQQAL
                     KDFHEKYYSANLMKAVIYSNKPLPELAKMAADTFGRVPNKESKKPEITVPVVTDAQKG
                     IIIHYVPALPRKVLRVEFRIDNNSAKFRSKTDELITYLIGNRSPGTLSDWLQKQGLVE
                     GISANSDPIVNGNSGVLAISASLTDKGLANRDQVVAAIFSYLNLLREKGIDKQYFDEL
                     ANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLDAVNIADRYDAKAVKERLAMMT
                     PQNARIWYISPKEPHNKTAYFVDAPYQVDKISEQTFADWQQKAANIALSLPELNPYIP
                     DDFSLIKSEKKYDHPELIVDESNLRVVYAPSRYFSSEPKADVSLILRNPKAMDSARNQ
                     VMFALNDYLAGLALDQLSNQASVGGISFSTNANNGLMVNANGYTQRLPQLFQALLEGY
                     FSYTATEDQLEQAKSWYNQMMDSAEKGKAFEQAIMPAQMLSQVPYFSRDERRKILPSI
                     TLKEVLAYRDALKSGARPEFMVIGNMTEAQATTQARDVQKQLGADGSEWCRNKDVVVD
                     KKQSVIFEKAGNSTDSALAAVFVPTGYDEYTSSAYSSLLGQIVQPWFYNQLRTEEQLG
                     YAVFAFPMSVGRQWGMGFLLQSNDKQPSFLWERYKAFFPTTEAKLRAMKPDEFAQIQQ
                     AVITQMLQAPQTLGEEASKLSKDFDRGNMRFDSRDKIVAQIKLLTPQKLADFFHQAVV
                     EPQGMAILSQISGSQNGKAEYVHPEGWKVWENVSALQQTMPLMSEKNE"
     gene            7654..11196
                     /gene="recB"
                     /locus_tag="JN001_002620"
     CDS             7654..11196
                     /gene="recB"
                     /locus_tag="JN001_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit beta"
                     /protein_id="HAY9053806.1"
                     /translation="MSDVAETLDPLRLPLQGERLIEASAGTGKTFTIAALYLRLLLGL
                     GGSAAFPRPLTVEELLVVTFTEAATAELRGRIRSNIHELRIACLRETTDNPLYERLLE
                     EIDDKAQAAQWLLLAERQMDEAAVFTIHGFCQRMLNLNAFESGMLFEQQLIEDESLLR
                     YQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDDETL
                     ASRHAQIVARIATVKQQWRDAVGELDALIESSGIDRRKFNRSNQAKWIDKISAWAEEE
                     TNSYQLPESLEKFSQRFLEDRTKAGGETPRHPLFEAIDQLLAEPLSIRDLVITRALAE
                     IRETVAREKRRRGELGFDDMLSRLDSALRSESGEVLAAAIRTRFPVAMIDEFQDTDPQ
                     QYRIFRRIWHHQPETALLLIGDPKQAIYAFRGADIFTYMKARSEVHAHYTLDTNWRSA
                     PGMVNSVNKLFSQTDDAFMFREIPFIPVKSAGKNQALRFVFKGETQPAMKMWLMEGES
                     CGVGDYQSTMAQVCAAQIRDWLQAGQRGEALLMNGDDARPVRASDISVLVRSRQEAAQ
                     VRDALTLLEIPSVYLSNRDSVFETLEAQEMLWLLQAVMTPERENTLRSALATSMMGLN
                     ALDIETLNNDEHAWDAVVEEFDGYRQIWRKRGVMPMLRALMSARNIAENLLATAGGER
                     RLTDILHISELLQEAGTQLESEHALVRWLSQHILEPDSNASSQQMRLESDKHLVQIVT
                     IHKSKGLEYPLVWLPFITNFRVQDQAFYHDRHSFEAVLDLNAAPKSVDLAEVERLAED
                     LRLLYVALTRSVWHCSLGVAPLVRRRGDKKGDTDVHQSALGRLLQKGEPQDAAGLRTC
                     IEALCDDDIAWQTAQTGDNQPWQVNDALTAELNARTLQRLPGDNWRVTSYSGLQQRGH
                     GIAQDLMPRLDVDAAGVVSVVEEPTLTPHQFPRGASPGTFLHSLFEDLDFTQPVDPNW
                     VQEKLELGGFESQWEPVLTEWITAVLQAPLNEKGVSLSQLSDRDKQVEMEFYLPISEP
                     LIASQLDALIRQFDPLSAGCPPLEFMQVRGMLKGFIDLVFRHEGRYYLLDYKSNWLGE
                     DSSAYTQQAMAAAMQAHRYDLQYQLYTLALHRYLRHRIADYDYDRHFGGVIYLFLRGV
                     DKEHPQQGIYTTRPNAGLIALMDEMFAGMTLEEA"
     gene            11196..13022
                     /gene="recD"
                     /locus_tag="JN001_002621"
     CDS             11196..13022
                     /gene="recD"
                     /locus_tag="JN001_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease V subunit alpha"
                     /protein_id="HAY9053807.1"
                     /translation="MKLQKQLLEAVEHKQLRPLDVQFALTVAGDEHPAVTLAAALLSH
                     DAGEGHVCLPLSRLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMIL
                     CGDRLYLNRMWCNERTVARFFNEVNHAIEVDEALLAQTLDKLFPVSDEINWQKVAAAV
                     TLTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
                     ALRQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDL
                     PMMSRLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTG
                     THVPAGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTD
                     IEKRLLQSGEDYIAMLEEALAGYGRYLDLLQARAEPDLIIQAFNEYQLLCALREGPFG
                     VAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDSALGLFNGDIGIALDRGQGT
                     RVWFAMPDGNIKSVQPSRLPEHETTWAMTVHKSQGSEFDHAALILPSQRTPVVTRELV
                     YTAVTRARRRLSLYADERILSAAIATRTERRSGLAALFSSRE"
     gene            complement(13084..14415)
                     /gene="argA"
                     /locus_tag="JN001_002622"
     CDS             complement(13084..14415)
                     /gene="argA"
                     /locus_tag="JN001_002622"
                     /EC_number="2.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino-acid N-acetyltransferase"
                     /protein_id="HAY9053808.1"
                     /translation="MVKERKTELVEGFRHSVPYINTHRGKTFVIMLGGEAIEHENFSS
                     IVNDIGLLHSLGIRLVVVYGARPQIDANLAAHHHEPLYHKNIRVTDAKTLELVKQAAG
                     TLQLDITARLSMSLNNTPLQGAHINVVSGNFIIAQPLGVDDGVDYCHSGRIRRIDEDA
                     IHRQLDSGAIVLMGPVAVSVTGESFNLTSEEIATQLAIKLKAEKMIGFCSSQGVTNDD
                     GDIVSELFPNEAQARVEAQEEKGDYNSGTVRFLRGAVKACRSGVRRCHLISYQEDGAL
                     LQELFSRDGIGTQIVMESAEQIRRATINDIGGILELIRPLEQQGILVRRSREQLEMEI
                     DKFTIIQRDNTTIACAALYPFPEEKIGEMACVAVHPDYRSSSRGEVLLERIAAQAKQS
                     GLSKLFVLTTRSIHWFQERGFTPVDIDLLPESKKQLYNYQRKSKVLMADLG"
     gene            14647..>15895
                     /locus_tag="JN001_002623"
     CDS             14647..>15895
                     /locus_tag="JN001_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMIN domain-containing protein"
                     /protein_id="HAY9053809.1"
                     /translation="MSGSNTAISRRRLLQGAGAMWLLSVSQVSLAAVSQVVAVRVWPA
                     SSYTRVTVESNRQLKYKQFALSNPERVVVDIEDVNLNSVLKGMAAQIRADDPFIKSAR
                     VGQFDPQTVRMVFELKQNVKPQLFALAPVAGFKERLVMDLYPANAQDMQDPLLALLED
                     YNKGDLEKQVPPAQSGPQPGKAGRDRPIVIMLDPGHGGEDSGAVGKYKTREKDVVLQI
                     ARRLRSLIEKEGNMKVYMTRNEDIFIPLQVRVAKAQKQRADLFVSIHADAFTSRQPSG
                     SSVFALSTKGATSTAAKYLAQTQNASDLIGGVSKSGDRYVDHTMFDMVQSLTIADSLK
                     FGKAVLNKLGKINKLHKNQVEQAGFAVLKAPDIPSILVETAFISNVEEERKLKTATFQ
                     QEVAESILAGIKAYFADGATLARR"
BASE COUNT         3747 a         3971 c         4445 g         3732 t
ORIGIN      
        1 acgggcaaca gaggctcctg gttgtgaagc cagtttaacc atttgaagtt taaactcatt
       61 tgaaaatgat ctgcggggtt ctgcagataa tgctttctgt tccataacag gtgtccacta
      121 gttgaaaagg tgggcaccta cgttaccaat acaggcttaa tggctacata cggcggtcag
      181 tttacgctta cctgtatcat tgtgcagtgg gatgcgaaca gtaacggtat ctgggatcgc
      241 gaaccggtaa aagagtccga ccagattgga tttcgtctga aggagcatgt gctggaaacg
      301 ctacgcggtg cgacatcctg tgaaggtaag ggctgggata aagtcactaa tccggatgcc
      361 atcattatcg acacttttca ggtcgtacgt caggatgtca gcggcttctc gccggtgttg
      421 acggttaata tgcgtgctgc cagtaagtct gaaccgcaaa ccgtggtgaa tgccagctat
      481 agcgtgacag gattcaacct gtgaaccgcg aaaagggtgt ttcgtcactg gctctggtcc
      541 tgatgctgct ggttttgggt agtttgctat tacaaggaat gagccaacag gatcgcagtt
      601 ttgcctctcg cgtgagcatg gaaagtcagt cattgcgccg ccaggccatc gttcagtcgg
      661 cgctggcgtg gggaaaaatg cactcctggc agacgcagcc agcagttcag tgctcgcagt
      721 acgctgaaac cgatgcccag gtttgtttgc gtttactggc agataatgaa gccttattga
      781 ttgccggtta tgaaggcgtt tcgttgtggc gaacaggcga agtcattgat ggaaacattg
      841 ttttttcgcc aagcggctgg agcgattttt gtccgctgaa agagagggcg ttatgtcagc
      901 ttccctgaag aatcaacaag gctttagcct gccggaggta atgttggcga tggtgttgat
      961 ggtgatgatt gtcactgcgt tatcgggttt ccagcgaaca ttaatgaaca gtcttgccag
     1021 cagaaaccag taccaacagc tctggcggca tggctggcag caaacgcaac tgcgcgcgat
     1081 ttcgccacca gctaactggc aggtcaaccg attgcagaca tcgcaggcgg gatgtgtcag
     1141 catcagcgtt acgctagttt cacccggggg cagagaaggc gagatgaccc gcctgcattg
     1201 cccgaatcgt cagtagtcag gagccgctat gttaagggtc taccattcca atcgtctgga
     1261 cgtgctggaa gcgttgatgg agtttattgt cgaacgcgaa cggctggacg atcctttcga
     1321 accagagatg attctggtgc aaagtaccgg tatggcacag tggctgcaaa tgaccctgtc
     1381 gcaaaagttt ggtattgcgg caaacattga ttttccgctg cctgcgagct ttatctggga
     1441 tatgttcgtc cgggtgttac cggagatccc caaagagagc gcctttaaca aacagagcat
     1501 gagctggaaa ctgatgactc tgctgccgca actgttggag cacgaagact ttaccctgtt
     1561 gcggcattat ctgactgacg atagcgacaa gcgaaaactg ttccagcttt cctcaaaagc
     1621 ggcggacctg tttgaccagt atctggtcta tcgcccggag tggctggcac aatgggaaac
     1681 aggacatttg gttgaagggc tgggagaagc acaggcctgg caagcgccgt tgtggaaggc
     1741 gctggtggaa tatacccatg aactcggaca accgcgctgg caccgcgcga atctctatca
     1801 gcgctttatc gaaacgctgg agtccgcgac gacctgcccg ccggggttac cttcgcgcgt
     1861 ctttatatgc ggtatttccg cgttaccgcc tgtttatctc caggcgctcc aggcgctggg
     1921 taaacatatt gaaatccatc tcctgtttac caacccctgc cgttattact ggggcgatat
     1981 taaagatcct gcttatctgg cgaaactgct gactcgtcag cgtcgacaca gttttgaaga
     2041 tcgcgaattg ccgctatttc gcgatagcga aaatgccgga cagctcttta acagcgatgg
     2101 tgaacaggat gtcggcaacc cgctgctggc ctcatggggg aagcttgggc gcgactacat
     2161 ttatctcctt tctgacctgg agagcagcca ggagctggac gcctttgtcg atgtcacgcc
     2221 agataacctg ctgcataaca ttcagtctga cattctggaa ctggaaaacc gtgccgttgc
     2281 tggtgtgaac atcgaagagt tttcccgtag cgataacaaa cgcccgcttg atccactgga
     2341 tagcagtatc accttccacg tttgccatag cccgcagcgt gaagttgaag ttttgcacga
     2401 tcgcctgctg gcgatgctgg aagaagaccc gacacttact ccgcgcgaca tcatcgtgat
     2461 ggtggctgat atcgacagct acagtccgtt tattcaggct gtgtttggta gcgcacctgc
     2521 ggatcgttac ctgccttacg ccatttccga ccgtcgggcg cggcagtcgc atccggtact
     2581 ggaagcgttt atcagcctgt tatcgttgcc agacagccgc tttgtgtcgg aagacgtgct
     2641 ggcattactg gatgtgccgg tgctggcggc gcggtttgac atcaccgaag aagggctgcg
     2701 ttatttacgc ctgtgggtca acgaatccgg cattcgttgg gggatagatg acgacaacgt
     2761 tcgcgagctg gaactccccg ccaccggaca acacacctgg cgatttggcc tgacgcgtat
     2821 gttgctgggc tacgcgatgg agagcgcgca gggcgagtgg caatcggttc taccttatga
     2881 tgagtcgagc ggcttaattg cagaactggt ggggcatctg gcttcactgc taatgcagct
     2941 aaacatctgg cgtcgcgggc tggcacagga gcgtccgcta gaagagtggt tgccggtttg
     3001 tcgcgatatg ctcaacgcct tcttcctgcc ggatgcggaa accgaagcgg cgatgacgct
     3061 gatcgaacaa caatggcagg cgattatcgc cgaaggttta ggtgcgcagt atggcgacgc
     3121 ggtgccgctg tcactattgc gtgatgaact ggcacagcgt ctggatcaag aacgtatcag
     3181 ccagcgtttt ctcgccggac cggttaacat ttgtactctg atgccaatgc gttcaattcc
     3241 gttcaaagtg gtttgcctgc tgggaatgaa cgacggcgtt tatccacgtc agcttgcgcc
     3301 attgggcttt gacctgatga gccagaaacc gaagcgtggc gaccgtagcc gtcgcgatga
     3361 cgaccgctac ctgttcctgg aagcgttaat ttccgcgcag caaaaactct atatcagtta
     3421 tatcgggctt tccattcagg ataacagtga acgtttcccg tcggtactgg tgcaggaact
     3481 gatcgactac atcgggcaaa gtcattatct accgggcgat gaagcgctca actgtgatga
     3541 aagcgaggca agggtaaaag cgcatcttac ctgcctccat acccggatgc cgtttgatcc
     3601 acaaaactac cagccaggcg aacgacaaag ctatgctcgt gaatggctac ctgcggccag
     3661 ccaggctggt aaagcacatt ctgaatttgt tcagccgctg ccgtttacct taccggaaac
     3721 cgtgccgctg gaaacgctac aacgattctg ggcacatccg gtgcgggcat ttttccagat
     3781 gcgtttgcag gtgaacttcc gtaccgaaga cagcgaaatc cccgacaccg agccatttat
     3841 tctggaaggg cttagccgtt atcaaatcaa tcagcagtta ttgaatgcac tggttgagca
     3901 ggatgatgcc gaacgcttgt tccgtcgctt ccgggcggca ggggatttac cgtatggcgc
     3961 ttttggtgaa attttctggg aaactcagtg ccaggagatg cagcagcttg ccgacagagt
     4021 cattgcctgt cgccagccgg ggcagagtat ggaaattgat ctcgcctgca acggtgtgca
     4081 gataactggc tggttgccgc aggtgcagcc ggatggcctg ttgcgctggc gtccctcttt
     4141 attaagtgtg gcgcagggaa tgcaactttg gctggaacac cttgtctact gtgccagcgg
     4201 tggtaatggt gaaagtcgcc tttttctacg caaagacggc gagtggcgtt ttccgccgct
     4261 tgcagccgaa caggctttgc attacctctc acaactgatt gaggggtatc gtgaagggat
     4321 gtccgcgcca ttgctggtgt tacctgaaag tggcggcgcg tggctaaaaa cctgttatga
     4381 cgcgcaaaac gatgccatgc tggatgacga ttccacgttg caaaaagccc gtacgaaatt
     4441 ccttcaggct tacgaaggca acatgatggt gcgtggcgaa ggtgataata tctggtatca
     4501 aaggctctgg cggcaattaa caccagagac aatggaggcc atcgttgaac agtcgcaacg
     4561 tttcctgtta ccgctgtttc gctttaatca gtcatgagtg ctgtataaaa attgcgcaat
     4621 ctatccgctt actttatgat gcgcaccagt cacggactga tggttatata aacataggct
     4681 gactcgtgca gcacaagatt aaattctggc agatgatttg cgttaacgtg ttgaatctgg
     4741 acagaaaatt aagttgatta tgaggtccgt gaatgccccg cagcacttgg ttcaaagcat
     4801 tattgttgtt agttgccctt tgggcaccct taagtcaggc agaaacggga tggcagccga
     4861 ttcaggaaac catccgtaaa agtgataaag ataaccgcca gtatcaggct atacgtctgg
     4921 ataacggtat ggtggtcttg ctggtttctg atccgcaggc agttaaatcg ctctcggcgc
     4981 tggtggtgcc cgttgggtcg ctggaagatc ccgaggcgta ccaggggctg gcacattacc
     5041 ttgaacatat gagtctgatg gggtcgaaaa agtacccgca ggctgacagt ctggccgaat
     5101 atctcaaaat gcacggcggt agtcacaatg ccagcactgc gccgtatcgc acggctttct
     5161 atctggaagt tgagaacgac gccttgcctg gtgcggtaga ccgcctggcc gatgctattg
     5221 ctgaaccttt gctcgacaag aaatatgccg aacgtgagcg taatgcggtg aacgctgaat
     5281 taaccatggc gcgtacgcgt gacgggatgc gcatggcaca ggtcagcgca gaaaccatta
     5341 acccggcaca ccccggttca aagttttctg gtggtaacct cgaaacttta agcgataaac
     5401 ctggtaatcc ggtgcagcag gcgctgaaag atttccacga gaagtactat tccgccaatc
     5461 tgatgaaggc ggttatttac agcaataaac cgctgccgga gttggcaaaa atggcggcgg
     5521 acacctttgg tcgcgtgccg aacaaagaga gcaaaaaacc ggaaatcacc gtgccggtag
     5581 tcaccgacgc gcaaaagggc attatcattc attacgtccc ggcactgccg cgtaaagttc
     5641 tgcgcgttga gtttcgcatc gataacaact cagcgaagtt ccgtagtaaa acggatgaat
     5701 tgattaccta tctgattggt aatcgcagcc caggtacact ttccgactgg ctgcaaaagc
     5761 agggattagt tgagggcatt agcgccaact ccgatcctat cgtcaacggc aacagcggcg
     5821 tattagcgat ctctgcgtct ttaaccgata aaggcctggc taatcgcgat caggttgtgg
     5881 cggcaatttt tagctatctc aatctgttac gtgaaaaagg cattgataaa caatacttcg
     5941 atgaactggc gaatgtgctg gatatcgact tccgttatcc gtcgatcacc cgtgatatgg
     6001 attacgtcga atggctggca gataccatga ttcgtgttcc ggttgagcat acgctggatg
     6061 cagtcaatat tgccgatcgg tacgatgcta aagcagtaaa agaacgtctg gcgatgatga
     6121 cgccgcagaa tgcgcgtatc tggtatatca gcccgaaaga gccgcacaat aaaacggctt
     6181 attttgtcga tgcgccgtat caggtcgata aaatcagcga acaaactttc gctgactggc
     6241 agcaaaaagc tgccaatatt gcgctctcct taccggagct taacccctat attcctgacg
     6301 atttctcgct gattaagtca gagaagaaat atgaccatcc agagctgatt gttgatgagt
     6361 cgaatctgcg cgtggtgtat gcgccaagcc gttatttttc cagcgaaccc aaagctgatg
     6421 tcagcctgat tttgcgtaat ccgaaagcca tggacagcgc ccgcaatcag gtgatgtttg
     6481 cgctcaatga ttatctcgca gggctggcgc ttgatcagtt aagcaaccag gcgtcggttg
     6541 gtggcataag tttttccacc aacgctaaca acggccttat ggttaatgct aatggttaca
     6601 cccagcgtct gccgcagctg ttccaggcat tgctcgaggg gtactttagc tataccgcta
     6661 cggaagatca gcttgagcag gcgaagtctt ggtataacca gatgatggat tccgcagaaa
     6721 agggtaaagc gtttgagcag gcgattatgc ccgcgcagat gctctcgcaa gtgccgtact
     6781 tctcgcgaga tgaacggcgt aaaattttgc cctccattac gttgaaagag gtgctggcct
     6841 atcgcgacgc cttaaaatca ggggctcgac cagagtttat ggttatcggc aacatgaccg
     6901 aggcccaggc aacaacgcag gcacgcgatg tgcaaaaaca gttgggcgct gatggttcag
     6961 agtggtgtcg aaacaaagat gtagtggtcg ataaaaaaca atccgtcatc tttgaaaaag
     7021 ccggtaacag caccgactcc gcactggcag cggtatttgt accgactggc tacgatgaat
     7081 acaccagctc agcctatagc tctctgttgg ggcagatcgt acagccgtgg ttctacaatc
     7141 agttgcgtac cgaagaacaa ttgggctatg ccgtgtttgc gtttccaatg agcgtggggc
     7201 gtcagtgggg catgggcttc cttttgcaaa gcaatgataa acagccttca ttcttgtggg
     7261 agcgttacaa ggcgtttttc ccaaccacag aggcaaaatt gcgagcgatg aagccagatg
     7321 agtttgcgca aatccagcag gcggtaatta cccagatgct gcaggcaccg caaacgctcg
     7381 gcgaagaagc atcgaagtta agtaaagatt tcgatcgcgg caatatgcgc ttcgattcgc
     7441 gtgataaaat cgtggcccag ataaaactgc tgacgccgca aaaacttgct gatttcttcc
     7501 atcaggcggt ggtcgagccg caaggcatgg ctattctgtc gcagatttcc ggcagccaga
     7561 acgggaaagc cgaatatgta caccctgaag gctggaaagt gtgggagaac gtcagcgcgt
     7621 tgcagcaaac aatgcccctg atgagtgaaa agaatgagtg atgtcgccga gacactagat
     7681 cctttgcgct tgcccttaca gggtgagcgc ctgattgaag cctctgccgg cacaggcaaa
     7741 acctttacga ttgcggcgct ctatttgcgc ctgttacttg gactaggcgg ttccgccgcc
     7801 tttccccgcc cgctgaccgt tgaagaactg ctggtggtca cctttaccga ggctgccacg
     7861 gcagaattgc gtggtcgtat ccgtagcaat atccatgagt tgcgcatcgc ctgtctgcgt
     7921 gaaactaccg acaatccact gtacgaacgt ctgctggaag agatcgacga taaagcgcaa
     7981 gccgcgcagt ggttgttgtt agccgaacgg cagatggatg aagcggcagt ctttactatt
     8041 cacggttttt gccagcgcat gctcaacctg aatgcctttg aatccggcat gctgtttgag
     8101 cagcagctga ttgaagatga gtctctgcta cgttaccagg cctgcgccga tttctggcgt
     8161 cgccactgct acccgctgcc gcgtgaaata gcccaggtcg tctttgaaac ctggaaaggg
     8221 ccgcaggcgt tgctgcgcga tattaatcgt tatctgcaag gcgaagcgcc ggttatcaaa
     8281 gcaccgccgc ccgatgatga aacgctggct tcccgccacg cgcaaattgt ggcgcgtatt
     8341 gctacggtaa aacagcagtg gcgcgacgca gtgggtgaac tggatgcgct gatcgaatct
     8401 tctggtattg atcgacgcaa gtttaaccgt agcaatcagg ctaaatggat cgacaagatc
     8461 agcgcctggg cagaagaaga gaccaacagt tatcagttgc cggagtcgct ggaaaaattc
     8521 tcccagcgtt tcttagaaga tcgcacgaaa gctggggggg aaaccccgcg acatccactg
     8581 tttgaggcga tcgatcaact gcttgcagaa ccattgtcga tccgcgatct ggtgatcacc
     8641 cgcgcattgg ctgagatccg cgaaacagta gcgcgtgaaa aacgccgccg tggcgaattg
     8701 ggttttgatg acatgttaag tcggctcgat tccgcgctgc gtagcgaaag cggtgaggtg
     8761 ttggcagcgg cgatccgtac gcgattcccg gtggcaatga tcgatgaatt tcaggatacc
     8821 gacccccagc agtaccgaat ttttcgccgt atctggcacc atcagccgga aaccgcattg
     8881 ttgctgattg gcgacccgaa gcaggccata tatgcattcc ggggtgcgga tatcttcact
     8941 tatatgaagg cgcgtagtga agttcacgcc cactacactt tagacaccaa ctggcgctcc
     9001 gcacctggaa tggtgaacag tgtgaacaag cttttcagcc agactgatga cgcgttcatg
     9061 tttcgcgaaa taccgtttat tccagtgaaa tcagccggga aaaatcaggc gttacgtttt
     9121 gtatttaaag gtgaaacgca gcctgcgatg aaaatgtggc tgatggaagg cgaaagctgc
     9181 ggcgttggcg actatcaaag taccatggcg caggtatgtg ctgcgcaaat ccgcgactgg
     9241 ctacaagccg gacagcgggg cgaagcgttg ctgatgaacg gcgacgacgc gcgtccggtg
     9301 cgtgcttcgg acatcagtgt gctggtgcgc agccgccagg aggccgccca ggtgcgcgat
     9361 gccttaacgt tgctggaaat cccttccgtt tacctttcga accgcgacag tgtttttgaa
     9421 actctggaag cgcaggaaat gctttggtta ttgcaggcgg tgatgacgcc cgaacgtgag
     9481 aacaccctgc gtagtgcgct ggcaacgtca atgatggggc tgaacgcgct ggatatcgaa
     9541 acgctgaata atgacgaaca tgcgtgggat gcggtagttg aagagttcga tggttatcgg
     9601 caaatctggc gcaaacgtgg cgttatgccg atgctgcggg cgctgatgtc ggcgcgtaac
     9661 attgcagaaa acttgctggc aacggcaggc ggtgagcggc gtcttaccga tatcttgcat
     9721 atcagcgaac tgctacaaga agccggaacg cagctggaaa gtgaacatgc gctggtacgc
     9781 tggttatcgc aacatatcct cgagccagac agtaatgcct ccagccaaca aatgcgcctc
     9841 gaaagtgata aacatctggt gcagattgtc acgatccata aatcgaaagg gctggaatat
     9901 ccgctggtct ggttgccatt tattaccaat ttccgcgtcc aggatcaggc gttttatcac
     9961 gatcgccact cgtttgaggc agttttggat cttaatgctg cgccaaaaag cgtcgacctc
    10021 gcggaggtcg aacgtctggc ggaagatctg cgtttgcttt acgtggcgct gacgcgttcg
    10081 gtttggcatt gcagtctcgg cgttgcaccg ctggtgcgcc gtcgtggcga taaaaaaggt
    10141 gacaccgacg tccaccaaag tgcgctcggg cgtttgctgc aaaaagggga accgcaagat
    10201 gcggcagggc ttcgcacctg tattgaagcg ttatgcgatg atgatattgc ctggcaaacg
    10261 gcacaaactg gtgataacca gccctggcag gttaatgatg ctttaactgc agaactgaat
    10321 gcgaggacac tacaacgatt gcccggcgat aactggcgtg tcaccagcta ctccggcttg
    10381 cagcagcgtg gtcacggtat cgctcaggat ctgatgccac ggctggatgt tgatgccgca
    10441 ggcgtggtca gcgtcgttga agaaccgacg ttaacaccgc atcagttccc gcgcggtgcg
    10501 tcaccgggga cattcttgca cagtttgttt gaagacctcg attttaccca gccggttgac
    10561 ccgaactggg tacaggaaaa actggaactc ggcggctttg aatcgcagtg ggaaccggtg
    10621 ttgaccgagt ggatcacggc tgtcctccag gcacctctca atgaaaaggg ggttagcctg
    10681 agtcagcttt ccgaccgcga taaacaggtg gagatggagt tttacctgcc gattagcgaa
    10741 ccgctcatcg ccagccagct tgatgcacta attcgccagt ttgatccgct atccgctggc
    10801 tgcccgccgc tggagttcat gcaggtacgc ggcatgttaa aaggctttat cgacctagta
    10861 ttccgccacg aagggcgtta ttacctgctc gactataaat ccaactggct gggtgaagac
    10921 agttcggctt acacccaaca ggctatggca gcagcgatgc aggcacaccg ctatgatctg
    10981 caatatcagc tttataccct ggcgctgcat cgttatctgc gccatcgcat tgctgattac
    11041 gactatgatc gtcactttgg cggcgttatc tatctgttcc tgcgtggcgt tgataaagaa
    11101 catccgcaac aagggattta cacaacccga cccaacgccg ggttgattgc cctgatggat
    11161 gagatgtttg ccggtatgac cctggaggag gcgtaatgaa attgcaaaag caattactgg
    11221 aagctgtgga gcacaaacag ctacgcccgc tggatgtgca atttgccctg accgtggcgg
    11281 gagatgaaca tcctgccgtc accctcgcgg cggcactgtt aagtcatgat gccggagagg
    11341 gacacgtctg tttgccgctt tcacgactgg aaaataacga ggcgtcgcat ccgctgttgg
    11401 cgacctgtgt cagtgaaatc ggtgagctac aaaattggga agaatgcttg ctggcttctc
    11461 aagcggtcag caggggagat gaacccacgc cgatgatcct ctgtggcgat cgtctttatt
    11521 tgaatcgcat gtggtgtaac gagcggacgg tagcgcgctt cttcaatgag gtgaatcatg
    11581 ccattgaggt tgatgaagct ctactggcgc aaaccctgga caaacttttt ccagtaagcg
    11641 atgaaattaa ctggcaaaaa gttgcagcgg cagtgacgct gacgcggcgg atctcggtga
    11701 tttccggcgg cccaggcacc ggtaaaacga ccaccgtggc gaagttgctg gcagcgttaa
    11761 ttcaaatggc cgacggcgaa cgctgccgta tccgtctggc tgcaccaacg ggtaaagctg
    11821 ccgcgcgctt aaccgaatct ctcggcaagg ctttgcgaca gttaccgctg accgatgaac
    11881 aaaagaaacg cattccggaa gatgccagca ctttgcaccg attgctgggc gcgcagccgg
    11941 gtagccagcg tttacgtcat catgccggta acccgctgca tcttgatgtg ctggtggtag
    12001 atgaagcgtc aatgatcgat ctgcctatga tgtcgagact gatcgacgcc ttgcccgatc
    12061 atgcgcgagt gatctttctc ggcgatcgtg atcaactggc ctcggttgag gctggggctg
    12121 tgctgggcga tatctgcgct tatgccaacg cgggctttac cgccgagcgt gccaggcagc
    12181 taagccgcct gacggggact cacgttccgg caggaaccgg cacagaagcg gcatctttgc
    12241 gcgacagtct ctgcctgctg caaaaaagct atcgtttcgg cagcgattct ggcattggtc
    12301 agttagctgc ggcgatcaac cgtggtgata aaacggcagt gaaaaccgtt tttcagcagg
    12361 attttactga tatcgaaaaa cgacttttac agagcggcga agattatatt gcgatgcttg
    12421 aggaagctct tgcgggttat ggacgttatc tggatctgct gcaagcgcgt gccgagccgg
    12481 atttaatcat tcaggcgttc aatgagtacc aacttttgtg cgccctgcgg gaagggccgt
    12541 ttggcgtggc tggactgaat gagcgaattg agcagtttat gcaacagaag cgcaaaattc
    12601 atcgtcatcc gcactctcgt tggtacgaag gtcgaccggt gatgattgcc cgtaatgaca
    12661 gcgcgcttgg gttgtttaat ggcgatatcg gtattgcgct ggatcgcggg caggggacgc
    12721 gcgtctggtt tgcgatgccg gacggcaata ttaagtctgt gcaaccgagt cgcttgccag
    12781 agcacgaaac tacgtgggcg atgacggtac ataaatcgca gggatcggag ttcgaccatg
    12841 cggcgttgat tttaccgagc caacgcacgc cggtagtaac gcgagagctg gtatacaccg
    12901 cggtgacccg cgcgcgtcgc cgtctgtcgc tgtatgccga tgagcgtata ttaagtgcgg
    12961 caatcgccac tcgtactgag cggcgcagtg gtctggcggc gttgtttagt tcgcgggaat
    13021 aaacgtaatt gccggatgcg atgcacgagt gttacgcatg tcgcatccga caattttcat
    13081 cgcttaccct aaatccgcca tcaacacttt ggatttacgc tggtagttgt acaactgctt
    13141 tttgctctcg ggcagtaaat caatatccac cggggtaaat ccacgttcct ggaaccagtg
    13201 aatactgcgc gtggtcagca caaacaattt gcttaagccg ctctgcttcg cctgagcggc
    13261 aatgcgttcc agcagaacct cgccccgtga tgaactgcgg taatccgggt gaactgccac
    13321 acaggccatt tccccaatct tctcttccgg gaacggatag agcgcggcgc aggcaatagt
    13381 cgtgttatcg cgctgaataa tggtgaattt gtcgatttcc atctccagct gctcgcgaga
    13441 acggcgcacc agaatacctt gctgctccag cgggcgaatc aactccagaa taccgccaat
    13501 atcgttgatt gttgcgcgac gaatctgctc ggcgctttcc atcacaatct gcgtaccgat
    13561 accgtcgcgt gagaacaact cttgcaacag cgcgccatct tcctgataac tgattaaatg
    13621 acagcgacgc acgccgctgc ggcaggcttt cactgcgcca cgcaaaaagc gcaccgtacc
    13681 ggagttgtaa tcgcctttct cttcctgggc ttctacccgc gcttgcgctt cgttagggaa
    13741 aagttctgag acaatatcac cgtcgtcatt agtgacgccc tgtgaagagc aaaaaccaat
    13801 catcttctca gctttcagtt tgatggccag ttgagtggca atctcttccg aggtcagatt
    13861 aaagctctcg ccagtgactg aaacagcgac cggccccatt agcactattg caccgctgtc
    13921 cagttgacga tggatcgcgt cttcatcaat ccgccggata cgcccgctat ggcagtaatc
    13981 cacgccgtca tcgacgccca gcggctgggc aataataaaa ttgccactga cgacgttgat
    14041 atgcgcgccc tgtagcggcg tgttattgag actcatcgac aggcgagcag tgatgtccag
    14101 ttgcaatgtt cccgcagcct gcttcaccag ttccagtgtt ttggcgtcgg tcacacgtat
    14161 attcttgtga tacagcggtt cgtggtgatg cgcggccaga tttgcgtcga tctgcggacg
    14221 tgcgccatag accaccacca gacggatgcc gaggctgtgc aacaacccga tatcattaac
    14281 gatactggag aaattctcat gctcaatggc ttcaccgccg agcatgatga caaacgtttt
    14341 tccccggtgg gtattgatat agggaaccga atggcggaat ccctcgacca gctcggtttt
    14401 acgttccttt accacggcac acccctttgc atgattattc taaattagtg tatttttatt
    14461 ctgttttttc gcagggtgca agtgtaaatt ttatgcgaga gcgacttttt tatcagtaat
    14521 gccgtgaata taaaaagaat gtttaccgtt tattagatga cagattatgc gtctttcgct
    14581 aaagtttccg gtcaaattag tcgtttactt gttacacagc ttagatttct tttgctcggg
    14641 agaggcatgt caggatccaa cactgcaatc agccgtcgtc gtttactgca aggcgcgggt
    14701 gccatgtggc tattgagcgt aagtcaggtc agtctggctg cggtcagcca ggtcgtggcg
    14761 gtgcgcgtct ggcctgcgtc cagctacacc cgtgtgacgg tagaatcaaa tcgtcagctg
    14821 aaatataagc agttcgcgtt gagtaaccct gaacgcgtgg tggtggatat cgaagatgta
    14881 aacctgaact cggtactcaa ggggatggcg gcacaaattc gtgcagacga cccgttcatc
    14941 aagtcggcgc gcgtcgggca atttgacccg cagaccgtac ggatggtttt tgaattaaag
    15001 caaaacgtaa aaccgcagct gtttgccctt gcgccggtcg ccgggtttaa agagcgtctg
    15061 gtgatggacc tctatccggc caatgcacag gatatgcagg acccgctgct ggcgctgctg
    15121 gaggattaca acaaaggcga cctcgaaaag caggtgccgc cagcacaaag tggtccacaa
    15181 ccgggtaaag cagggcgcga tcgtcctatt gttattatgc ttgaccctgg ccacggcggc
    15241 gaagactccg gtgcggtggg gaaatacaaa acgcgcgaaa aagacgtggt attgcaaata
    15301 gctcgccgtc tgcgctctct gatcgagaaa gagggcaata tgaaggtgta catgacgcgc
    15361 aatgaagaca tcttcattcc gttgcaagtg cgcgtagcaa aagcccagaa acagcgtgct
    15421 gacctgtttg tctctatcca tgccgacgcc tttaccagtc gtcagccgag cggttcctct
    15481 gtgtttgcgc tctcaaccaa aggtgcaacc agtactgcgg caaaatatct ggcacaaacc
    15541 cagaacgcct cggacttgat tggtggcgtg agcaaaagcg gtgaccgcta tgtcgaccac
    15601 accatgttcg atatggtgca gtcgctgacc attgccgaca gcctgaagtt tggtaaagcg
    15661 gtactgaata agctcggtaa aatcaacaag ctgcataaaa atcaagttga acaggccggg
    15721 tttgccgtac taaaggcacc agatattccc tccattctgg tcgaaacggc gtttattagt
    15781 aacgttgagg aagagcgtaa actgaaaacg gcgactttcc agcaggaagt tgcggagtct
    15841 attcttgcgg ggattaaagc gtattttgcc gatggggcga cgctggcgag aaggg
//
LOCUS       DADMJE010000095        15634 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.096, whole genome shotgun sequence.
ACCESSION   DADMJE010000095 DADMJE010000000
VERSION     DADMJE010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15634)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15634)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15634
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.096"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            331..423
                     /locus_tag="JN001_002624"
                     /pseudo
     CDS             331..423
                     /locus_tag="JN001_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004120448.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            427..606
                     /locus_tag="JN001_002625"
                     /pseudo
     CDS             427..606
                     /locus_tag="JN001_002625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310134.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimH domain protein"
     gene            940..3219
                     /gene="ydeP"
                     /locus_tag="JN001_002626"
     CDS             940..3219
                     /gene="ydeP"
                     /locus_tag="JN001_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance putative oxidoreductase YdeP"
                     /protein_id="HAY9053810.1"
                     /translation="MKKKIESYQGAAGGWGAVKSVANAVRKQMDIRQDVIAMFDMNKP
                     EGFDCPGCAWPDPKHTASFDICENGAKAIAWEVTDKQVNASFFAENTVQSLLTWGDHE
                     LEAAGRLTQPLKYDAVSDCYKPLSWQQAFDEIGARLQSYSDPNQVEFYTSGRTSNEAA
                     FLYQLFAREYGSNNFPDCSNMCHEPTSVGLAASIGVGKGTVLLEDFEKCDLVICIGHN
                     PGTNHPRMLTSLRALVKRGAKMIAINPLQERGLERFTAPQNPFEMLTNSETQLASAYY
                     NVRIGGDMALLKGMMRLLIERDDAASAAGRPSLLDDEFIQTHTVGFDELRRDVLNSEW
                     KDIEHISGLSQTQIAELADAYAAADRTIICYGMGITQHEHGTQNVQQLVNLLLMKGNI
                     GKPGAGICPLRGHSNVQGDRTVGITEKPSAEFLARLGERYGFTPPHAPGHAAIASMQA
                     ICTGQARALICMGGNFALAMPDREASAVPLTQLDLAVHVATKLNRSHLLTARHSYILP
                     VLGRSEIDMQKSGAQAVTVEDSMSMIHASRGVLKPAGVMLKSECAVVAGIAQAALPQS
                     VVAWEYLVEDYDRIRNDIEAVLPEFADYNQRIRHPGGFHLINAAAERRWMTPSGKANF
                     ITSKGLLEDPSSAFNSKLVMATVRSHDQYNTTIYGMDDRYRGVFGQRDVVFMSAKQAK
                     ICRVKNGERVNLIALTPDGKRSSRRMDRLKVVIYPMADRSLVTYFPESNHMLTLDNHD
                     PLSGIPGYKSIPVELEPSN"
     gene            3467..3664
                     /gene="safA"
                     /locus_tag="JN001_002627"
     CDS             3467..3664
                     /gene="safA"
                     /locus_tag="JN001_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system connector SafA"
                     /protein_id="HAY9053811.1"
                     /translation="MHATTVKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQLG
                     ISEMGRIARDLTHFIINSLQD"
     gene            3739..4500
                     /gene="ydeO"
                     /locus_tag="JN001_002628"
     CDS             3739..4500
                     /gene="ydeO"
                     /locus_tag="JN001_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid stress response transcriptional regulator
                     YdeO"
                     /protein_id="HAY9053812.1"
                     /translation="MSLVCSVIFIHHAFNANILDKDYAFSDGEILMVDNAVRTHFEPY
                     ERHFKEIGFTENTIKKYLQCTNIQTVTVPVPAKFLRASNVPTGLLNEMIAYLNSEERN
                     HHNFSELLLFSCLSIFAACKGFITLLTNGVLSVSGKVRNIVNMKLAHPWKLKDICDCL
                     YISESLLKKKLKQEQTTFSQILLDARMQHAKNLIRVEGSVNKIAEQCGYASTSYFIYA
                     FRKHFGNSPKRVSKEYRCQSHTGMNTGNTMSALAI"
     gene            4902..6584
                     /locus_tag="JN001_002629"
     CDS             4902..6584
                     /locus_tag="JN001_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416015.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfatase-like hydrolase/transferase"
                     /protein_id="HAY9053813.1"
                     /translation="MKSALKKSVVSTSISLILASGMAAFAAHAADDVKLKATKTNVAF
                     SDFTPTEYSTKGKPNIIVLTMDDLGYGQLPFDKGSFDPKTMENREVVDTYKIGIDKAI
                     EAAQKSTPTLLSLMDEGVRFTNGYVAHGVSGPSRAAIMTGRAPARFGVYSNTDAQDGI
                     PLTETFLPELFQNHGYYTAAVGKWHLSKISNVPVPEDKQTRDYHDNFTTFSAEEWQPQ
                     NRGFDYFMGFHAAGTAYYNSPSLFKNRERVPAKGYISDQLTDEAIGVVDRAKTLDQPF
                     MLYLAYNAPHLPNDNPAPDQYQKQFNTGSQTADNYYASVYSVDQGVKRILEQLKKNGQ
                     YDNTIILFTSDNGAVIDGPLPLNGAQKGYKSQTYPGGTHTPMFMWWKGKLQPGNYDKL
                     ISAMDFYPTALDAADISIPKDLKLDGVSLLPWLQDKKQGEPHKNLTWITSYSHWFDEE
                     NIPFWDNYHKFVRHQSDDYPHNPNTEDLSQFSYTVRNNDYSLVYTVENNQLGLYNLTD
                     LQQKDNLAAANPQVVKEMQGVVREFIDSSQPPLSEVNQEKFNNIKKALSEAK"
     gene            6636..7793
                     /locus_tag="JN001_002630"
     CDS             6636..7793
                     /locus_tag="JN001_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416014.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic sulfatase maturase"
                     /protein_id="HAY9053814.1"
                     /translation="MHVTAKPSSFQCNLKCDYCFYLEKESQFTHEKWMDDSTLKEFIK
                     QYIAASGNQVYFTWQGGEPTLAGLDFFRKVIHYQQRYAGQKRIFNALQTNGILLNNEW
                     CSFLKEHEFLVGISIDGPQELHDRYRRSNSGNGTFAKVIAAIERLKSYQVEFNTLTVI
                     NNVNVHYPLEVYHFLKSIGSKHMQFIELLETGTPNIDFSGHSENTFRIIDFSVPPTAY
                     GKFMSTIFMQWVKNDVGEIFIRQFESFVSRFLGNGHTSCIFQESCKDNLVVESNGDIY
                     ECDHFVYPQYKIGNINKSELKTMNSVQLTAQKKRISAKCQQCAYKPICNGGCPKHRIT
                     KVNNETVSYFCEGYKILFSTMVPYMNAMVELAKNRVPLYHIMDVAKQMENN"
     gene            complement(7759..7881)
                     /locus_tag="JN001_002631"
     CDS             complement(7759..7881)
                     /locus_tag="JN001_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053815.1"
                     /translation="MTKHPTGIYVGCLVKVIRRRLRMELKESVINYSPFVLQHP"
     gene            8096..9781
                     /locus_tag="JN001_002632"
     CDS             8096..9781
                     /locus_tag="JN001_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HAY9053816.1"
                     /translation="MITIPITFCMLIAKYLCLLKPFWLRKNNKTSVLLIIIILAMILG
                     VVKIQVWLNDWNNDFFNALSQKETDKLWQLVLWFPALLGIFVLISVNKTWLIKLLTIR
                     WREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQ
                     SLSMLITFTVILWQSAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRP
                     LNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELRDNFHTIKENWHRLMNRQR
                     LLDYWQNIYSRSLSVLPYFLLLPQFISGQINLGGLMKSRQAFMLVSNNLSWFIYKYDE
                     LAELAAVIDRLYEFHQLTEQRPTNKPKNCQHAVQVANASIRTPDNKIILENLNFHVSP
                     GKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDIFSPADSWYVSQTPLIKTGLLKEIICK
                     ALPLPVDDKSLSEVLHQVGLGKLAARIHDHDRWGDILSSGEKQRIALARLILRRPKWI
                     FLDETTSHLEEQEAIRLLRLVREKLPTSGVIMVTHQPGVWNLADDICDISAVL"
     gene            9819..12191
                     /locus_tag="JN001_002633"
     CDS             9819..12191
                     /locus_tag="JN001_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY9053817.1"
                     /translation="MKRVLIPGVILCGADVAQAVDDKNMYMHFFEEMTVYAPVPVPVN
                     GNTHYTSESIERLPTGNGNISDLLRTNPAVRMDSTQSTSLNQGDIRPEKISIHGASPY
                     QNAYLIDGISATNNLNPANESDASSATNISGMSQGYYLDVSLLDNVTLYDSFVPVEFG
                     RFNGGVIDAKIKRFNADDSKVKLGYRTTRSDWLTSHIDENNKSAFNQGSSGSTYFSPD
                     FKKNFYTLSFNQELADNFGVTAGLSRRQSDITRADYVSNDGIVVGRAQYKNVIDTALS
                     KFTWFASDRFTHDLTLKYTGSSRDYNTSTFPQSDREMGNKSYGLAWDMDTQLAWAKLR
                     TTVGWDHISDYTRHDHDIWYTELSCTYGDITGRCTRGGLGHISQAVDNYTFKTRLDWQ
                     KFAVGDVSHQPYSGAEYIYSDAWTERHNQSESYVINAAGKKTNHTIYHKGKGSLGIDN
                     YTLYMADHISWRNVSLMPGVRYDYDNYLSNHNISPRFMTEWDIFADQTSMITAGYNRY
                     YGGNILDMGLRDIRNSWTESVSGNKTLTRYQNLKTPYNDELAMGLQQKIGKNVIARAN
                     YVYREAHDQISKSSRTDSATKTTITEYNNDGKTKTHSFNLSFELAEPLHIRQVDINPQ
                     IVFSYIKSKGNLSLNNGYEESNTGDNQVVYNGNLVSYDSVPVADFNNPLKISLNMDFT
                     HQPSGLVWANTLAWQEARKARIILGKTNAQYISEYSDYKQYVDEKLDSSLTWDTRLSW
                     TPQFLKQQNLTISADILNVLDSKTAVDTTNTGVATYASGRTFWLDVSMKF"
     gene            12236..15031
                     /locus_tag="JN001_002634"
     CDS             12236..15031
                     /locus_tag="JN001_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HAY9053818.1"
                     /translation="MEIIMRNLCFLLTLVATLLLPGRLIAAALPQDEKLITGQLDNGL
                     RYMIYPHAQPKDQVNLWLQIHTGSLQEEDNERGVAHFVEHMMFNGTKTWPGNKVIETF
                     ESMGLRFGRDVNAYTSYDETVYQVSLPTTQKQNLQQVMAIFSEWSNAATFEKLEVDAE
                     RGVITEEWRAHQDAKWRTSQARRPFLLANTRNLDREPIGLMDTVATVTPAQLRQFYQR
                     WYQPNNMTFIVVGDIDSKKALALIKDNLSKLPANKAAENRVWPTKAENHLRFNIINDK
                     ENRVNGIALYYRLPMVQVNDEQSFIEQAEWSMLVQLFNQRLQERIQSGELKTISGGTA
                     RSVKIAPDYQSLFFRVNARDDNMQDAANALMAELATIDQHGFSAEELDDVKSTRLTWL
                     KNAVDQQAERDLRMLTSRLASSSLNNTPFLSPEETYQLSKRLWQQITVQSLAEKWQQL
                     RKNQDAFWEQMVNNELAAKKALSPAAILALEKEYANKKLAAYIFPGRNLSLTVDADPQ
                     AEISSKETLAENLTSLTLSNGARVILAKSAGEEQKLQITAVSNKGDLSFPAQQKSLIA
                     LANKAVSGSGVGELSSSSLKRWSAENSVTMSSKVSGMNTLLSVSARTNNPEPGFQLIN
                     QRITHSTINDNIWASLQNAQIQALKTLDQRPAEKFAQQMYETRYADDRTKLLQENQIV
                     QFTAADALAADRQLFSSPADITFVIVGNVSEDKLVALITRYLGSIKHSDSPLAAGKPL
                     TRATDNASVTVKEQNEPVAQVSQWKRYDSRTPVNLATRMALDAFNVALAKDLRVNIRE
                     QASGAYSVSSRLSVDPQAKDISHLLAFTCQPERHDELLTLANEVMVKRLAKGISEQEL
                     NEYQQNVQRSLDIQQRSVQQLANTIVNSLIQYDDPAAWTEQEQLLKQMTVENVNTAVK
                     QYLSHPVNTYTGVLLPK"
     gene            15393..>15634
                     /locus_tag="JN001_002635"
     CDS             15393..>15634
                     /locus_tag="JN001_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY9053819.1"
                     /translation="MDKKQVTDLRSELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQ
                     IINDELYLDGNARQNLATFCQTWDDENVHKLMDLSI"
BASE COUNT         4554 a         3398 c         3423 g         4259 t
ORIGIN      
        1 tggtgacggc agttgaaacc aatgtgttga ggttgcatgg acggttaagc cgagaatacg
       61 gtagtaagtg agatatgggg tttggtcgtt gttaatgagc aaccatgacc gccaacgact
      121 ggattctccc ttggtttatg ttggtgcgca taatgtatat tatgttaaat catatctgag
      181 tgatgcgaag tgcttttctg gtagtcgtta ttcgttcagg gttccagaac ttaagcctct
      241 cctctttcat aattggcctg tgcatgacgg atataggctg gctggtatgc agatttgccg
      301 tttgccgcat cttcccagcg ttgaagactc aagctggcaa accgcgtgca aatgagcacg
      361 ccctctttcc atcaacactt caggcagctt gcgggaatga gtccactacg gtatcagaaa
      421 tgggaagtgg gtgtctctct gatgcgtaat ggaaaaatac tggctacggg agaaaatgtc
      481 tccctgggga cagtaaataa aagcaaagta tctctgggtt taagcgcaac ctatggacaa
      541 acaggaaaca aggttgcagc cggaaccgtc cagtcagtca ttggtgtcac ttttatctat
      601 gaataattgt gattttgatc ttagtctatg cgctccattc acgaaaattg cgcggataat
      661 tattttgtga aggctattat cctacacctg taagaaaatc cgcgcacaat tgaagccaga
      721 gtcttatttt ttatattgaa aaatatgtta atttaaacac tatgagagat gatgcttaac
      781 ttatcgtatt taatctattg tttaacgata atagattaaa aatagaaaga gagtagtccc
      841 ctactcttat atatccatgt tggcgataat ccctttgtat gtactgtgca tcatcgctat
      901 tacaaatcct aataattcat ttccacacag gataagtaga tgaagaaaaa aattgaatcc
      961 taccagggtg ctgcaggtgg ttggggtgct gttaaatccg tagcgaatgc agtacgtaag
     1021 cagatggata tacgccagga tgttattgcc atgtttgaca tgaataagcc agagggcttt
     1081 gactgtccgg gttgtgcatg gccagatcct aagcacactg cgtcattcga catttgtgaa
     1141 aacggcgcaa aagcaatcgc ctgggaagtc acggataagc aggtaaatgc ctctttcttt
     1201 gctgagaata cggttcaatc attacttacc tggggagatc acgagcttga ggctgcggga
     1261 cgtctcactc agcctttgaa atatgatgcc gtcagcgact gttacaagcc attaagctgg
     1321 caacaagctt tcgacgaaat tggcgcacgc cttcaaagct atagtgatcc caatcaggtt
     1381 gaattctata cttcgggccg cacttccaat gaagctgcct ttctttatca gctttttgcc
     1441 cgtgaatacg ggagcaataa ctttcccgac tgctccaaca tgtgccatga accgaccagt
     1501 gtgggtttgg cagcgagtat cggcgtgggt aaagggactg tgttgctgga agactttgag
     1561 aagtgcgatt tagtcatttg cattgggcat aaccctggta caaaccaccc ccgcatgctg
     1621 acttcgttgc gcgctttagt gaaacgggga gcgaaaatga tcgccatcaa tcctttacag
     1681 gaacgtggcc tggagcgatt taccgcaccg caaaacccgt ttgaaatgct gacgaactct
     1741 gagactcagt tggccagtgc gtactacaac gtgcgcattg gtggcgatat ggcgttgctc
     1801 aaggggatga tgcgcctgtt aattgagcgc gatgatgctg caagtgccgc aggtcggccc
     1861 tcattgcttg atgacgaatt tattcaaacg cataccgtcg gctttgacga gctacgccgt
     1921 gacgttctca attccgagtg gaaagatatc gaacatattt ctggactaag tcagacacaa
     1981 atcgccgaac tggctgacgc atatgccgct gccgatcgca ccattatctg ttacggaatg
     2041 gggatcactc agcacgaaca tggtacccag aatgtacagc aactggtcaa tctgctgttg
     2101 atgaaaggta acattggcaa gcctggtgcg ggtatctgcc cactacgagg tcactctaat
     2161 gtacagggcg accgaaccgt cggtatcacc gagaaaccgt ctgcagagtt tctggctcgc
     2221 ctgggtgagc gctatggctt caccccacct catgcacctg gacatgctgc aattgccagc
     2281 atgcaagcaa tatgcacggg gcaggctcga gcattgatct gcatgggggg caactttgca
     2341 ctggcaatgc cagatcggga agcgagcgct gtaccgttaa cgcaattaga tttggcggta
     2401 cacgtagcca ctaagcttaa ccgctctcat ctgctgaccg cacggcatag ctatattctg
     2461 ccggttctgg ggcgtagcga gattgacatg caaaaaagcg gtgcgcaggc ggtaaccgtt
     2521 gaggattcaa tgtcgatgat tcatgcctcg cgtggcgtgt taaaacccgc cggtgtaatg
     2581 ctgaaatcag agtgtgcagt ggtcgcggga atcgcgcagg cagcactacc ccagagcgtg
     2641 gtagcctggg agtatctggt ggaagattat gatcgcattc gcaatgacat tgaagctgtg
     2701 ttaccagagt tcgccgacta taaccagcgc atccgacatc ctggaggttt tcacctgata
     2761 aatgcagctg ctgaaaggcg ctggatgacg ccgtcaggta aggctaattt cattaccagc
     2821 aaagggctgt tagaagatcc ctcttcagcg tttaacagta agctggtcat ggcgacagta
     2881 cgcagccacg atcagtacaa cacgacgatt tatggtatgg atgatcgcta tcgaggggta
     2941 ttcggtcaac gagatgtggt ctttatgagt gctaaacaag ctaaaatttg ccgtgtaaaa
     3001 aacggcgaaa gagttaatct tattgcgctt acgccagacg gtaagcgcag ctcacgccgc
     3061 atggatagat taaaagtggt catttaccct atggctgacc gctcactggt gacctatttt
     3121 ccagaatcga atcacatgct aactcttgat aaccacgatc cattaagtgg cattcctggt
     3181 tataaaagta ttccggttga attagaacca tcaaattaat tcgcctcctc atttcttctg
     3241 ctgtcatccg cacagcagaa gaatttctca ttgactatta tcgcgcaatt tgctcacatt
     3301 gatcaaatta aaccacacac tataagatat aaacctctgc ctacagctgt aagaaactcc
     3361 gctcagtact gaagtgccag tcctatttcc tcttttctcc agcctgttat attaagcata
     3421 ctgattaaca atttttaacg ttatccgcta aataaacata tttgaaatgc atgcgaccac
     3481 agtgaaaaac aaaatcacgc aaagagacaa ctataaagaa atcatgtctg taattgtggt
     3541 tgtcttatta ctgaccctta cgttgatagc cattttttcg gcaattgatc agctgggtat
     3601 ttcagaaatg ggtcgcattg caagagatct tacacatttc attatcaata gtttgcaaga
     3661 ctgaaaataa acagcaaatt ataaatatga aatgttaaaa aagtatcgat aaaaacttta
     3721 ttgttttaag gagataaaat gtcgctcgtt tgttctgtta tatttattca tcatgccttc
     3781 aacgctaaca ttttagataa agattacgcc ttctctgacg gcgagatcct gatggtagat
     3841 aacgctgttc gtacgcattt tgaaccttat gagcggcatt ttaaagagat cggatttact
     3901 gaaaatacca ttaaaaaata tctacaatgc actaacatcc agacagtgac ggtgcctgtt
     3961 cctgcgaagt ttttacgtgc ttcaaatgta ccgactggat tgcttaatga aatgattgct
     4021 tatctcaact cggaagaacg caatcatcat aatttttcag aacttttgct tttttcttgc
     4081 ctgtctattt ttgccgcatg caaaggtttc attacactat taactaacgg tgtgctatcc
     4141 gtttccggaa aagtgagaaa tattgtcaac atgaagctgg cgcacccatg gaagctgaaa
     4201 gatatttgtg actgcctgta catcagtgaa agcctgttga agaaaaaact aaagcaagag
     4261 caaacgacat tctcacagat tctattagat gccagaatgc agcacgcaaa aaatttgata
     4321 cgcgtagaag gttcagtcaa taaaattgcc gaacaatgtg gttatgccag tacttcttat
     4381 tttatttatg cgttccgcaa acatttcggc aacagtccga agagagtttc taaggagtac
     4441 cgttgtcaaa gtcacacggg tatgaatacg ggcaacacga tgagtgcttt agctatttga
     4501 ttatttgcta acgagtagtc aaccacgcac gctacgtaag aattatatgg ggcagccatt
     4561 ccctgccccg cgttgttttt aggcgatata tttattgaaa taaataagtg acatccatca
     4621 catatttatg cacttgcata acctgttgca tgattattta tgttctcaat tcagcatttt
     4681 gtcagtaaaa tgcaataatt tattaaatat caataaatta gttgtttatc ggcgagaaat
     4741 tacttaatag aacagaaagt aatgtcaacg ctttatggac tgttatttcc ctttttttag
     4801 ctaaatctgc tatctcttta tgtgactaac ttcacttaca tccacttatt tctcttcgta
     4861 aaattacttc ggaattaagt acaataagaa gaggaacatt tatgaagtct gcattaaaga
     4921 aaagtgtcgt aagtacctcg atatctttga tactggcatc tggtatggct gcatttgctg
     4981 ctcatgcggc agatgatgta aagctgaaag caaccaaaac aaacgttgct ttctcagact
     5041 ttacgccgac tgaatacagt accaaaggaa agccaaatat tatcgtacta accatggatg
     5101 atcttggtta tggacaactt ccttttgata agggatcttt tgacccaaaa acaatggaaa
     5161 atcgtgaagt tgtcgatacc tacaaaatag ggatagataa agccattgaa gctgcacaaa
     5221 aatcaacgcc gacgctcctt tcattaatgg atgaaggcgt acgttttact aacggctatg
     5281 tggcacacgg tgtttccggc ccctcccgtg ccgcaataat gaccggtcga gctcccgccc
     5341 gctttggtgt ctattccaat accgatgctc aggatggtat tccgctaaca gaaactttct
     5401 tgcctgaatt attccagaat catggttatt acactgcagc agtaggtaaa tggcacttgt
     5461 caaaaatcag taatgtgccg gtaccggaag ataaacaaac gcgtgactat catgacaact
     5521 tcaccacatt ttctgcggaa gaatggcaac ctcaaaaccg tggctttgat tactttatgg
     5581 gattccacgc tgcaggaacg gcatattaca actccccttc actgttcaaa aatcgtgaac
     5641 gtgtccccgc aaaaggttat atcagcgatc agttaaccga tgaggcaatt ggcgttgttg
     5701 atcgtgccaa aacacttgac cagcctttta tgctttacct ggcttataat gctccgcacc
     5761 tgccaaatga taatcctgca ccggatcaat atcagaagca atttaatacc ggtagtcaaa
     5821 cagcagataa ctactacgct tccgtttatt ctgttgatca gggtgtaaaa cgcattctcg
     5881 aacaactgaa gaaaaacgga cagtatgata atactattat tctctttacc tccgataatg
     5941 gtgcggttat cgatggtcct ctgccgctga acggggcgca aaaaggctat aagagtcaga
     6001 cctatcctgg cggtactcac accccaatgt ttatgtggtg gaaaggaaaa cttcaacccg
     6061 gtaattatga caagctgatt tccgcaatgg atttctaccc gacagctctt gatgcagccg
     6121 atatcagcat tccaaaagac cttaagctgg atggcgtttc cttgctgccc tggttgcaag
     6181 ataagaaaca aggcgagcca cataaaaatc tgacctggat aacctcttat tctcactggt
     6241 ttgacgagga aaatattcca ttctgggata attaccacaa atttgttcgc catcagtcag
     6301 acgattaccc gcataacccc aacactgagg acttaagcca attctcttat acggtgagaa
     6361 ataacgatta ttcgcttgtc tatacagtag aaaacaatca gttaggtctc tacaatctga
     6421 cggatctaca gcaaaaagat aaccttgccg ccgccaatcc gcaggtcgtt aaagagatgc
     6481 aaggcgtggt aagagagttt atcgacagca gccagccacc gcttagcgag gtaaatcagg
     6541 agaagtttaa caatatcaag aaagcactaa gcgaagcgaa ataactaaac cttcatgcgg
     6601 cggaattttc cgccgcctta ttgagcgaga tagcgatgca cgttacagcc aagccctcca
     6661 gttttcaatg taatctcaaa tgtgattact gtttttacct tgaaaaagag tcgcagttta
     6721 ctcatgaaaa atggatggat gacagcactc tgaaagagtt catcaaacaa tatatcgcag
     6781 cgtctggcaa tcaggtctat tttacctggc aaggcggtga acccactctg gctggcctgg
     6841 attttttccg taaagttatt cactatcaac aacgctatgc aggccaaaaa cgtattttta
     6901 atgcattaca aacgaatggc attttattga ataatgaatg gtgttccttt ctcaaagaac
     6961 atgaatttct ggttggtatc tcgatcgatg gcccccagga gttacatgac cgttacagac
     7021 gcagtaattc aggtaacggt acttttgcaa aagtgatagc agccatcgag cgtctgaaat
     7081 catatcaagt tgagtttaat acgttaaccg tcattaataa cgttaatgtc cattaccctc
     7141 ttgaggttta tcatttttta aaatctatcg gcagtaaaca tatgcaattt atcgaattgc
     7201 tcgaaaccgg gacgccgaat attgatttca gtggtcatag tgagaacaca ttccgtatca
     7261 ttgatttttc tgtgcctccc acggcttatg gcaagtttat gtcaaccatt tttatgcaat
     7321 gggttaaaaa cgatgtgggt gaaattttca ttcgtcagtt tgaaagcttt gtcagccgtt
     7381 ttttggggaa tgggcataca agttgtattt tccaggagtc ctgcaaggat aatctggttg
     7441 ttgaaagtaa tggagacatt tacgaatgcg accattttgt ctatccacag tacaaaattg
     7501 gaaacattaa taaatctgaa ctcaaaacga tgaacagtgt acaactgaca gcgcaaaaaa
     7561 aacggatttc agcgaaatgt cagcaatgtg catataaacc tatctgcaat ggcggttgtc
     7621 ctaagcatcg tattactaaa gtaaacaatg agactgtttc ttatttttgc gaaggttata
     7681 aaatcctttt ttcaaccatg gtaccttata tgaacgccat ggttgagtta gctaagaaca
     7741 gagtaccgct ttaccacatt atggatgttg caaaacaaat ggagaataat taataacgct
     7801 ctcttttaac tccattctta gcctccttct tatgacctta acaaggcacc cgacataaat
     7861 tcctgtcggg tgtttcgtca tcatcatctt cccttgcgaa aatcctggct tacgtggtat
     7921 gcgtcagggc attagcaata cccttgatta tcaatagcat aaccataacc ataaccataa
     7981 ccactgaaaa ttaaaaattt ctatatattt catattgtta aatgatactt aaataaattt
     8041 catcagtaaa tcattgccat agataatcat tggatggcac aatcaatttt cgctaatgat
     8101 aaccattccc attacgtttt gtatgttgat agcaaagtat ctctgtctgc tgaagccctt
     8161 ttggctgcgt aagaataata aaacttcagt gttgttaatc attattatcc tcgcaatgat
     8221 ccttggcgtg gttaaaattc aggtctggtt aaacgactgg aataatgatt ttttcaatgc
     8281 gctaagccag aaagaaaccg ataagctttg gcagcttgtt ctttggttcc ctgccctgct
     8341 ggggatcttt gtattaatat ccgtaaacaa aacatggtta attaaactac tgactattcg
     8401 ctggcgcgaa tggttaacag attactacct taatcgctgg tttgcagata aaaactacta
     8461 cttcacgcag atctacggcg agcataaaaa tacagataac cctgaccaac gtatcgctga
     8521 agacattctc ttactgatca gcaaaacgct cagtctttca tttggcttca tccagtcact
     8581 tagcatgctg atcaccttta ccgttattct ttggcaaagc gcgggtacgc tctcattcac
     8641 tgttggtgga acagaatgga atatccaggg gtatatggtc tataccgtcg tgctcattgt
     8701 gatcggtgga actttattta cccataaggt tggtaagcgt attcgtccgc ttaatgtgga
     8761 aaaacaacgt agcgaagcga catttcgaac taatcttgtg cagcataata agcaggcaga
     8821 actgattgcg ctaagcaatg ctgagtctct acaacgccag gagttgcgcg acaattttca
     8881 taccattaaa gagaactggc atcgtttaat gaatcgtcag cggttgcttg attactggca
     8941 aaatatttat tcgcgctcgc ttagcgttct tccctacttt ctgttattgc cgcagtttat
     9001 tagcgggcag atcaatctgg gcggactgat gaaatcgcgc caggcattta tgctagtatc
     9061 gaacaattta agctggttta tttataaata tgacgaactt gctgaactgg ctgcggttat
     9121 cgatcgcttg tatgagttcc atcaactcac tgaacagcgc cctacgaata agcctaaaaa
     9181 ttgccaacat gcggtacaag tggctaatgc gagtattcgt acgcctgata ataagatcat
     9241 attagagaac ttgaactttc atgtttcgcc aggcaaatgg ctattactga aaggctactc
     9301 tggtgcggga aaaaccacac tgcttaaaac attatcccac tgctggccgt ggtttaaagg
     9361 tgatattttt tctcctgctg acagttggta tgtgtcacaa acaccgttaa tcaaaaccgg
     9421 cttactgaaa gagattattt gtaaagcact tcccctgccc gtagacgata aatcgttgag
     9481 cgaagtactg catcaggttg gtcttgggaa attggctgcg cgtattcatg accacgatcg
     9541 ctggggagat attctttcca gcggcgaaaa acaacgtatc gccctggcac gattaatttt
     9601 acgacgtccg aaatggatat ttcttgacga aactacctct catcttgagg aacaagaggc
     9661 tatccgctta ctgcgtttag tgcgtgaaaa actacccaca agcggcgtca ttatggttac
     9721 acatcaaccc ggtgtctgga acctggccga tgatatttgt gacattagcg cggttttata
     9781 aaaacaataa aagccctgct gtacggagat ataaataaat gaagcgagtt cttattcctg
     9841 gcgtcatttt atgtggcgct gatgtggcgc aggccgtcga tgacaaaaac atgtacatgc
     9901 atttttttga agagatgacg gtctatgctc ctgtccctgt acccgtaaac ggcaacacgc
     9961 attacaccag tgaaagcatc gagcgtttac cgaccgggaa tggcaatatc agcgatctgc
    10021 tgagaaccaa ccctgcggta cgcatggatt caacgcaaag tacctcgttg aaccagggag
    10081 atattcgccc tgagaaaatc tctattcacg gtgcgtcgcc ctaccagaat gcctatttga
    10141 ttgacggtat tagtgcaact aataacctga acccagcgaa tgagtccgat gccagtagtg
    10201 caaccaatat tagcgggatg tcacaggggt attatcttga tgtcagctta ctggacaatg
    10261 tgacgcttta tgacagtttt gtgccggttg aatttggtcg cttcaatggc ggggtaattg
    10321 atgcaaagat caaacgcttc aacgctgatg atagcaaggt gaaattgggt tatcgcacta
    10381 cgcgttcgga ctggttaaca tcgcatatcg atgagaataa caagagcgca tttaatcaag
    10441 gttcttcagg aagtacttat ttctctccag attttaaaaa gaacttttat accttgtcgt
    10501 ttaatcagga gctggctgat aactttggcg ttaccgccgg tttatcgcgc cgccagtctg
    10561 atatcacccg cgcggattat gtttcgaatg acggcattgt cgtcggtcgg gcacagtata
    10621 aaaacgttat cgatactgca ttgagcaaat ttacctggtt tgccagcgac cgctttaccc
    10681 acgatttaac cttaaaatat accggctcca gccgtgatta taataccagc accttcccgc
    10741 agtctgatcg cgaaatgggt aataaatcct atggtcttgc atgggatatg gatacgcaac
    10801 tcgcatgggc caaactacgt accaccgttg gttgggatca tattagtgat tatacccgtc
    10861 acgatcatga catctggtac accgaacttt catgtacata tggtgatatt acagggcgtt
    10921 gtacccgtgg cggattagga cacatttccc aggctgtaga taattacacc ttcaaaacac
    10981 gcctggactg gcaaaaattc gccgtgggtg atgtttcgca tcaaccctac tccggcgcgg
    11041 aatacatcta ttccgatgca tggactgaac gccataacca gtctgaatcc tatgtgatta
    11101 atgctgcagg aaagaaaact aaccatacca tttaccataa aggtaaaggc agcctaggaa
    11161 ttgacaacta cacgctgtat atggcggatc acattagctg gcggaatgtg tcgttaatgc
    11221 ccggtgtgcg ttatgactat gacaactatc tgtcaaacca caatatctcc ccgcgcttta
    11281 tgacggaatg ggatattttt gctgatcaaa cctcaatgat taccgccggt tataaccgtt
    11341 actatggcgg gaatattctt gatatgggat tacgtgatat ccgcaatagc tggacggaat
    11401 cggtatcagg taataaaacc ctgacgcgtt atcagaattt gaaaacgcct tataacgatg
    11461 aactggcaat gggattgcag caaaaaatcg gtaagaacgt tattgcacgc gcaaactatg
    11521 tttaccgtga agcgcatgat caaatcagca aaagcagtcg taccgacagc gcgactaaaa
    11581 ccaccattac tgaatataac aacgatggca aaaccaaaac gcattcgttt aacctcagtt
    11641 ttgaactggc cgaacccctg catatccgcc aggtagatat taacccgcaa attgtcttta
    11701 gctatatcaa gagcaagggc aacttgtcgt taaacaatgg ttatgaggag agcaataccg
    11761 gtgataacca ggtggtttat aacggtaatc tggtctctta cgatagcgtt ccagtggcag
    11821 attttaataa cccattaaag atctccttaa acatggattt cacgcatcaa ccgagcgggt
    11881 tagtgtgggc gaatacgctg gcgtggcaag aagcgcgtaa agctcgcatt atccttggta
    11941 agacaaatgc gcaatacatc agcgaatatt cagattacaa gcagtatgtt gacgaaaaac
    12001 tggatagcag cctgacctgg gacacccgct tgtcctggac gccacaattt ctgaaacaac
    12061 aaaacctgac gatcagtgcc gatattctca atgtactgga tagcaaaacc gctgttgata
    12121 caacgaatac cggtgtggcg acctacgcca gtggccgtac tttctggctt gatgtcagca
    12181 tgaaatttta atagttcgga ttttacttaa ccgggtaaat tcgcccggtt ttcgcatgga
    12241 gataattatg agaaacctct gtttcttact gacgttagtg gcaactctgt tgctccccgg
    12301 gcggctgatt gccgccgcct taccgcagga tgaaaagtta attaccgggc aactggacaa
    12361 tggcttgcga tatatgattt atccgcatgc tcaaccaaag gatcaggtaa atttatggct
    12421 gcaaattcat accggttcat tgcaggaaga agacaatgag cgcggcgtgg ctcattttgt
    12481 agaacatatg atgtttaacg gcacaaaaac atggccgggt aataaagtca tcgaaacatt
    12541 tgagtcaatg ggcctgcgtt ttggtcgcga tgttaatgcc tataccagct atgacgaaac
    12601 ggtgtatcag gtgagtttgc cgactacgca gaaacaaaat ctgcaacaag tgatggcaat
    12661 cttcagtgaa tggagtaatg ccgcaacctt tgaaaaactc gaagtagacg ctgaacgtgg
    12721 cgtaattact gaggaatggc gtgcccatca ggatgcgaaa tggcgcacct ctcaggcgcg
    12781 ccgccctttc ctgctggcta atacccgtaa tttagaccgt gaacctatcg gcctgatgga
    12841 tactgtcgcc acggtcacac cggcacaatt gcgccaattt tatcaacgct ggtatcaacc
    12901 aaataatatg acctttatcg tggtcggcga tatcgacagt aaaaaagcgc tggcgctgat
    12961 aaaggataat ttaagtaagc ttccggctaa caaagcagct gaaaatcgcg tctggccgac
    13021 aaaagccgaa aaccacctgc gctttaatat cattaatgat aaagaaaacc gggtgaacgg
    13081 catcgcactc tattatcgcc tgccaatggt acaagtgaac gatgagcaaa gctttatcga
    13141 acaagctgaa tggagcatgt tagttcagct gttcaatcaa cgtctgcagg aacgcataca
    13201 gtcgggcgag ttgaagacta tttctggcgg cactgcgcgc agcgttaaaa ttgcacccga
    13261 ttatcagtcg ctgtttttcc gtgtaaatgc acgagacgat aatatgcagg atgctgcgaa
    13321 tgcattaatg gcagagttgg caaccattga tcagcatggt ttttctgctg aagaactcga
    13381 tgatgtcaaa tctacccgcc tcacctggct gaaaaatgcg gttgatcagc aagctgaacg
    13441 tgatttacgt atgctgacca gtcgcctggc atccagctca ttaaataata cgccgttctt
    13501 gtcgccggaa gagacatatc aactttcgaa acgtctgtgg cagcaaatta ccgtgcaaag
    13561 tctggcggaa aaatggcagc agttaagaaa gaaccaggac gcattttggg agcaaatggt
    13621 aaacaatgag cttgccgcca aaaaagcatt gtctcctgcg gctatcctgg cgctggaaaa
    13681 agagtacgcc aacaaaaagc tggcggctta catcttccca ggcagaaatt tatcgttaac
    13741 agtagacgct gacccacagg cggaaattag cagcaaagaa acgctggctg agaatctgac
    13801 atcattaaca ctttccaatg gtgccagggt tattctggca aaatccgcgg gtgaagagca
    13861 aaagctacaa attactgccg tatcgaataa aggcgattta agtttccctg cgcagcaaaa
    13921 atcacttatc gcgctggcaa ataaagcagt aagcggaagc ggcgttggtg agctctcctc
    13981 ttccagcctg aaacgctgga gtgcggaaaa ttcggtaacc atgagcagta aagtcagtgg
    14041 catgaatacg ttgctctccg ttagcgcgcg gactaataac cctgaacctg gttttcagtt
    14101 gattaaccag cgaatcaccc acagcacgat taacgacaat atttgggcat cgctacaaaa
    14161 tgctcaaatt caggcgttga aaacgctcga ccagcgtcca gcggagaaat tcgcccagca
    14221 gatgtatgag acgcgctatg ctgatgaccg cacgaaatta ctgcaagaaa atcagattgt
    14281 acagtttact gccgcagatg cgctggctgc cgatcgccag ttgttttcat ctccagcgga
    14341 tatcacgttt gtcattgtcg gtaatgtctc agaagacaaa ctcgtggcgt taattacgcg
    14401 ttacttagga tcaatcaaac actctgattc gccattagcc gcaggtaaac cattaactcg
    14461 cgcgacggac aacgcatcgg ttactgtaaa agaacaaaat gaacctgtgg cacaggtttc
    14521 acagtggaag cgttatgatt cccggacacc tgttaatctg gcgacgcgta tggcgctcga
    14581 tgcttttaac gtcgcactgg caaaagatct acgtgttaat attcgtgaac aggcatctgg
    14641 agcatacagc gtttcttctc gcctctcggt tgatcctcag gccaaagata tcagtcattt
    14701 gctggctttt acttgtcaac cagaacgaca tgatgaactg ttaacgttag cgaatgaagt
    14761 gatggttaag cgtctggcta aagggatcag tgagcaagaa ctgaatgaat accagcaaaa
    14821 cgttcagcgc agcctcgata tccaacagcg tagcgttcaa caattagcga acactattgt
    14881 aaatagtctt attcaatatg acgatcctgc agcatggact gagcaggagc aattgttgaa
    14941 acaaatgacg gtagagaatg ttaacactgc cgttaaacaa tatctttctc atccggtaaa
    15001 tacttatacc ggagtattat tgccaaaata ataacagccc cgtcaacaca tcgttggcgg
    15061 ggattttagc aatattcgct atttttatgt aataatttta taaatgcgtt caaaataata
    15121 atcaagtact aatagtgata ttttaaggtc tgatttttac gtgataattc aggagacaca
    15181 gaatgcgcat aaaaataaca gcataaaaca ccttaccacc acccaagaat ttcatattgt
    15241 attgtttttc aatgaaaaaa cattattcgc gtaatatctc acgataaata acattaggat
    15301 tttgttattt aaacacgagt cctttgcact tgcttacttt atcgataaat cctacttttt
    15361 taatgcgatc caatcatttt aaggagttta aaatggataa gaagcaagta acggatttaa
    15421 ggtcggaact actcgattca cgttttggtg cgaagtctat ttccactatc gcagaatcaa
    15481 aacgttttcc gctgcacgaa atgcgcgacg atgtcgcatt ccagattatc aatgacgaat
    15541 tatatcttga tggcaacgct cgtcagaacc tggccacttt ctgccagacc tgggacgacg
    15601 aaaatgtcca caaattgatg gatttatcca ttaa
//
LOCUS       DADMJE010000096        15366 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.097, whole genome shotgun sequence.
ACCESSION   DADMJE010000096 DADMJE010000000
VERSION     DADMJE010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15366
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.097"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..321)
                     /locus_tag="JN001_002636"
     CDS             complement(<1..321)
                     /locus_tag="JN001_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707676.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbL family protein"
                     /protein_id="HAY9053820.1"
                     /translation="MMKKTLLLCAFLVGLVSSNVMALTLDEARTQGRVGETFYGYLVA
                     LKTDAETEKLVTDINAERKASYQQLAKQNNVSVDDIAKLAGQKLVARAKPGEYVQGIN
                     GKWVR"
     gene            complement(326..511)
                     /locus_tag="JN001_002637"
     CDS             complement(326..511)
                     /locus_tag="JN001_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnbE family lipoprotein"
                     /protein_id="HAY9053821.1"
                     /translation="MKILLAALTSSFMLAACTPRIEVAAPKEPITINMNVKIEHEIII
                     KADKDVEELLETRSDLY"
     gene            complement(508..3147)
                     /locus_tag="JN001_002638"
     CDS             complement(508..3147)
                     /locus_tag="JN001_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdbH family protein"
                     /protein_id="HAY9053822.1"
                     /translation="MLGKYKAVLALLLLIILVPLTLLMTLGLWVPTLAGIWLPLGTRI
                     ALDESPRITRKGLIIPDLRYLVGDCQLAHITNASLSHPSRWLLNVGTVELDSACLAKL
                     PQTEQSPAAPKTLAQWQSMLPNTWINIDKLIFSPWQEWQGKLSLALTSDIQQLRYQGE
                     KVKFQGQLKGQQLTVSELDVIAFEYQPPVKLVGEFTMPLVPDGLPVSGHATATLNLPQ
                     EPSLVDAELDWQENSGQLIVLARDNGDPLLDLPWQITRQQLTVSDGRWSWPYAGFPLS
                     GRLGVKVDNWQAGLENALISGRLSVLTQGQAGKGNAVLNFGPGKLSMDNSQLPLQLTG
                     EAKQADLILYARLPAQLSGSLTDPTLAFEPGALLRSKGRVIDSLDIDEIRWPLAGVKV
                     TQRGVDGRLQAILQAHENELGDFVLHMDGLANDFLPDAGRWQWRYWGKGSFTPMNATW
                     DVAGKGEWHDSTITLTDLSTGFDQLQYGTMTVEKPRLILDKPVVWVRDAQHPSFSGAL
                     SLDAGQTLFTGGSVLPPSTLKFSVDGRDPTYFLFKGDLHAGEIGPVRVNGRWDGIRLR
                     GNAWWPKQSLTVFQPLVPPDWKMNLRDGELYAQVAFSAAPEQGFRAGGHGVLKGGSAW
                     MPDNQVNGVDFVLPFRFADGAWHLGTRGPVTLRIAEVINLVTAKNITADLQGRYPWTE
                     EEPLLLTDVSVDVLGGNVLMKQLRMPQHDPALLRLNNLSSSELVSAVNPKQFAMSGAF
                     SGALPLWLNNEKWIVKDGWLANSGPMTLRLDKDTADAVVKDNMTAGSAINWLRYMEIS
                     RSSTNINLDNLGLLTMQANITGTSRVDGKSGTVNLNYHHEENIFTLWRSLRFGDNLQA
                     WLEQNARLPGNDCPQGKECEEKQ"
     gene            3355..4344
                     /gene="ldhA"
                     /locus_tag="JN001_002639"
     CDS             3355..4344
                     /gene="ldhA"
                     /locus_tag="JN001_002639"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY9053823.1"
                     /translation="MKLAVYSTKQYDKKYLQQVNESFGFELEFFDFLLTEKTAKTANG
                     CEAVCIFVNDDGSRPVLEELKKHGVKYIALRCAGFNNVDLDAAKELGLKVVRVPAYDP
                     EAVAEHAIGMMMTLNRRIHRAYQRTRDANFSLEGLTGFTMYGKTAGVIGTGKIGVAML
                     RILKGFGMRLLAFDPYPSAAALELGVEYVDLPTLFSESDVISLHCPLTPANYHLLNEA
                     AFDQMKNGVMIVNTSRGALIDSQAAIEALKNQKIGSLGMDVYENERDLFFEDKSNDVI
                     QDDVFRRLSACHNVLFTGHQAFLTAEALTSISQTTLQNLSNLEKGETCPNELV"
     gene            4455..4877
                     /gene="hslJ"
                     /locus_tag="JN001_002640"
     CDS             4455..4877
                     /gene="hslJ"
                     /locus_tag="JN001_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HslJ"
                     /protein_id="HAY9053824.1"
                     /translation="MKKVAAFVALSLLMAGCVSNDKIAVTPEQLQHHRFVLESVNGKP
                     VTSDKNPPEISFGEKMMISGSMCNRFSGEGKLSNGELTAKGLAMTRMMCANPQLNELD
                     NTISEMLKEGAQVDLTANQLTLATAKQTLTYKLADLMN"
     gene            complement(4874..5140)
                     /locus_tag="JN001_002641"
     CDS             complement(4874..5140)
                     /locus_tag="JN001_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015964583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing protein"
                     /protein_id="HAY9053825.1"
                     /translation="MRAAFWVGCAALLLSACSSEPVQQATAAHVAPGLKASMSSSGEA
                     NCAMIGGSLSVARQLDGTAIGMCALPNGKRCSEQSLAAGSCGSY"
     gene            5414..8938
                     /gene="nifJ"
                     /locus_tag="JN001_002642"
     CDS             5414..8938
                     /gene="nifJ"
                     /locus_tag="JN001_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HAY9053826.1"
                     /translation="MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGL
                     KNVWGDTPRVVEMQSEAGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTP
                     FVLHVAARTVATHALSIFGDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSR
                     VPFIHFFDGFRTSHEINKIVPLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANP
                     DSYFQSREATNPWYNAVYDHVEQAMNDFSAATGRQYQPFEYYGHPQAERVIILMGSAI
                     GTCEEVVDELLTRGEKVGVLKVRLYRPFSAKHLLQTLPGSVRSVAVLDRTKEPGAQAE
                     PLYLDVMTALAEAFNNGKRETLPRVIGGRYGLSSKEFGPDCVLAVFAELNAAKPKARF
                     TVGIYDDVTNLSLPLPENTQPNSAKLEALFYGLGSDGSVSATKNNIKIIGNSTPWYAQ
                     GYFVYDSKKAGGLTVSHLRVSEQPIRSAYLISQADFVGCHQLQFIDKYQMAERLKPGG
                     IFLLNTPYSADEVWSRLPQEVQAVLNQKKARFYVINAAKIARECGLAARINTVMQMAF
                     FHLTQILPGDSALAELQGAIAKSYSSKGQDLVEGNWQALALARESVEEVPLQPVNPHS
                     ANRPPVVSDAAPDFVKTVTAAMLAGLGDALPVSALPPDGTWPMGTTRWEKRNIAEEIP
                     IWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPASLHSLDVKSRDMRGQKYVLQV
                     APEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEEKINYDFFLNLPEIDRSKL
                     ERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRMLIANATGCSSIYGGNLP
                     STPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRLLDQFADKIPAELLT
                     ALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLIGGDGWAYDIGFG
                     GLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRKARKDLGVSMM
                     MYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLALSHDQMRQL
                     TATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQPEVAEQL
                     WKDAAADLQKRYDFLAQMAGKAEKSNTD"
     gene            9304..10437
                     /gene="ompN"
                     /locus_tag="JN001_002643"
     CDS             9304..10437
                     /gene="ompN"
                     /locus_tag="JN001_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin OmpN"
                     /protein_id="HAY9053827.1"
                     /translation="MKSKVLALLIPALLAAGAAHAAEVYNKDGNKLDLYGKVDGLHYF
                     SDNSAKDGDQSYARLGFKGETQINDQLTGYGQWEYNIQANNTESSKNQSWTRLAFAGL
                     KFADYGSFDYGRNYGVMYDIEGWTDMLPEFGGDSYTNADNFMTGRANGVATYRNTDFF
                     GLVNGLNFAVQYQGNNEGASNGQEGTNNGRDVRHENGDGWGFSTTYDLGMGFSAGAAY
                     TSSDRTNDQVNHTAAGGDKADAWTAGLKYDANNIYLATMYSETRNMTPFGDSDYAVAN
                     KTQNFEVTAQYQFDFGLRPAVSFLMSKGRDLHAAGGADNPAGVDDKDLVKYADVGATY
                     YFNKNMSTYVDYKINLLDEDDSFYAANGISTDDIVALGLVYQF"
     gene            10578..11012
                     /gene="uspF"
                     /locus_tag="JN001_002644"
     CDS             10578..11012
                     /gene="uspF"
                     /locus_tag="JN001_002644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310024.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspF"
                     /protein_id="HAY9053828.1"
                     /translation="MNRTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSL
                     PYYASLGLAYSAELPAMDDLKAEAKSQLEEIIKKFKLPTDRVHVHVEEGSPKDRILEL
                     AKKIPAHMIIIASHRPDITTYLLGSNAAAVVRHAECSVLVVR"
     gene            11593..12483
                     /gene="sitA"
                     /locus_tag="JN001_002645"
     CDS             11593..12483
                     /gene="sitA"
                     /locus_tag="JN001_002645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707262.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter substrate-binding
                     protein SitA"
                     /protein_id="HAY9053829.1"
                     /translation="MLLGCLALTCSIAFQASATEKFKVITTFTIIADMAKNVAGDAAE
                     VSSITKPGAEIHEYQPTPGDIKRAQGAQLILANGMNLELWFQRFYQHLNGVPEVIVSS
                     GVTPVGITEGPYEGKPNPHAWMSPDNALIYVDNIRDALIKYDPANAQTYQRNADTYKA
                     KITQTLAPLRKQITELPENQRWMVTSEGAFSYLARDLGLKELYLWPINADQQGTPQQV
                     RKVVDIVKKNHIPAVFSESTISDKPARQVARETGAHYGGVLYVDSLSTENGPVPTYID
                     LLKVTTSTLVQGIKAGKREK"
     gene            12483..13310
                     /gene="sitB"
                     /locus_tag="JN001_002646"
     CDS             12483..13310
                     /gene="sitB"
                     /locus_tag="JN001_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter ATP-binding
                     protein SitB"
                     /protein_id="HAY9053830.1"
                     /translation="MMQSAGIVVNDVTVTWRNGHTALRDASFTVPSGSIAALVGVNGS
                     GKSTLFKAIMGFVRLTSGKISVLGIPTRQALQKNLVAYVPQSEEVDWSFPVLVEDVVM
                     MGRYGYMGMLRIAKKRDRQIVTDALERVDMVDFRHRQIGELSGGQKKRVFLARAIAQQ
                     GDVILLDEPFTGVDVKTEAKIISLLRELRAEGKTMLVSTHNLGSVTTFCDYTVMVKGT
                     VLASGPTDTTFTAENLELAFSGVLRHVTLNGSEESIITDDERPFVAHRPSAVQREAR"
     gene            13307..14164
                     /gene="sitC"
                     /locus_tag="JN001_002647"
     CDS             13307..14164
                     /gene="sitC"
                     /locus_tag="JN001_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitC"
                     /protein_id="HAY9053831.1"
                     /translation="MNVLLEPFSYEYMLNAMWVSAMVGGLCAFLSCYLMLKGWSLIGD
                     ALSHSIVPGVAGAYMLGLPFSLGAFFSGGLAAGSMLFLNQRTRLKEDAIIGLIFSSFF
                     GLGLFMVSLNPTSVNIQTIVLGNILAIDPADILQLTIIGILSIIVLFFKWKDLMVTFF
                     DENHARAIGLHPGRLKILFFTLLSVSTVAALQTVGAFLVICLVVTPGATAWLLTDRFP
                     RLLIIAVTIGSVTSFLGAWVSYFLDGATGGIIVVAQTLLFLLAFVFAPTHGLLANRRR
                     AHKALEDRS"
     gene            14161..15018
                     /gene="sitD"
                     /locus_tag="JN001_002648"
     CDS             14161..15018
                     /gene="sitD"
                     /locus_tag="JN001_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron/manganese ABC transporter permease subunit
                     SitD"
                     /protein_id="HAY9053832.1"
                     /translation="MMALLLEPLQFTFMSHALLISLVVSIPCALLSVFLVLKGWALMG
                     DAMSHAVFPGIVLTWILGLPLATGAFVAGVFCAVATGYLKDNSRIKQDTVMGIVFSGM
                     FAAGLILYIAIKPDVHLDHILFGDMLGITIGDIIQTVIIAGLVTLVISVKWRDFLLFS
                     FDYQQAQVSGLHTRWLHYGLLCMVSLTIVATLKAVGIILSISLLIAPGAIAVLLTQRF
                     HIALLLATGISVIVSMTGVWLSFFIDSAPAPTIVVLFAVVFIMTFTVTSINARTKGNA
                     HTQDLLSPN"
BASE COUNT         3862 a         3861 c         3720 g         3923 t
ORIGIN      
        1 tcgtacccat ttaccgttta tcccttgtac atattccccc ggtttggccc gagctacgag
       61 cttttgcccg gcgagtttcg cgatatcatc tacagacaca ttattttgct ttgccagttg
      121 ttggtaactc gctttacgtt cggcattaat gtcggttact aatttctctg tttcagcatc
      181 cgttttcagc gcaaccagat aaccataaaa tgtttccccg acccgcccct gcgttctggc
      241 ttcatccaga gtcaatgcca ttacattgct gcttaccagc ccaacaagaa acgcacaaag
      301 aagtaatgtt ttcttcatca tcgcctcagt aaagatcgct acgagtttca agcagctctt
      361 cgacatcttt gtctgccttg atgatgatct catgctcaat tttaacgttc atattgatag
      421 tgatcggttc cttgggcgca gcgacttcaa tacgcggcgt acaggcagcc agcataaaag
      481 atgacgtcaa cgcagccagt aaaattttca ttgtttttcc tcacactctt ttccttgcgg
      541 acagtcattt cccggcagac gtgcgttctg ctccaaccat gcctggagat tatcgccaaa
      601 gcgtaaactg cgccacagcg taaaaatatt ctcttcatga tggtaattaa ggtttaccgt
      661 accgctttta ccatcaacgc gactggtacc tgtaatgttg gcctgcatgg ttaataaacc
      721 gagattatct aaattaatat ttgtcgatga acggctaatt tccatatagc gcaaccagtt
      781 aattgctgaa cccgcagtca tattgtcttt caccaccgca tctgcggtgt ctttatccag
      841 ccgcaaggtc attggcccgc tatttgccag ccaaccatct ttcactatcc atttttcgtt
      901 gtttagccat aacggcaatg caccactaaa tgccccggac atggcgaatt gtttcggatt
      961 gacggcgcta accagttcgc tggatgagag attattcagc cgcaacagcg ccgggtcatg
     1021 ttgcggcata cgtaattgtt tcatcagtac gttaccgcct aacacatcga cgctaacatc
     1081 agtcaacagc aagggttctt cttcagtcca cggataacgc ccttgcaaat cagccgtaat
     1141 atttttcgct gtcaccagat taatcacttc ggcaattcgc aacgtaacgg ggccgcgagt
     1201 ccccagatgc caggctccat cggcaaaacg gaaaggcagg acaaaatcga caccgttaac
     1261 ctgattatct ggcatccagg cactaccgcc tttcaacacg ccgtgccctc ccgcgcggaa
     1321 tccttgttca ggcgcagcag aaaatgcaac ctgagcatac agttcaccat cgcgtaagtt
     1381 catcttccag tcgggtggca ccagcggctg gaatacagtc agtgattgtt ttggccacca
     1441 ggcgttaccg cgcagacgaa taccgtccca gcgaccattt acccgaaccg ggccaatctc
     1501 accagcatgt aaatcgcctt taaagaggaa atacgtcgga tcgcgcccat cgacgctaaa
     1561 ttttaaggtt gatggcggta acacactgcc gccagtgaac agcgtttgcc cggcgtccag
     1621 tgacagcgcg ccgctgaagg agggatgctg tgcgtcacgt acccagacga cgggcttgtc
     1681 cagaattaat cgcggctttt ctaccgtcat cgtaccgtat tgtaactggt cgaaaccggt
     1741 ggagaggtcg gtcagcgtaa tcgtgctgtc atgccattca ccttttcctg cgacatccca
     1801 ggtggcattc atcggtgtaa aactgccttt tccccagtag cgccactgcc agcggcccgc
     1861 gtcagggaga aaatcattcg ccagcccatc catatgcagc acgaaatcgc ccagttcatt
     1921 ttcatgcgcc tgcaaaatgg cctgcaaacg tccgtcaaca ccacgttggg tgacttttac
     1981 acccgctaaa ggccagcgga tttcatcgat gtccagcgaa tcgatgactc ttccctttga
     2041 acgaagtaac gcgcctggct caaaggccag cgttgggtca gtcagacttc cacttagctg
     2101 cgcgggtaag cgggcatata aaatgaggtc cgcctgtttc gcttcaccgg tcagctgcag
     2161 aggcagctgg ctgttatcca tgcttaattt tcctgggcca aaatttagca ccgcgttgcc
     2221 tttacccgct tgcccctggg tcagcacact cagtcgtccg ctgatcagag cgttctcaag
     2281 ccctgcctgc cagttgtcga ctttgacacc cagtcggcca ctcaaaggaa aacctgcata
     2341 cggccaactc cagcgaccat cgcttacggt caattgttga cgagtaattt gccacggcaa
     2401 atcgagcaac ggatcgccgt tatcacgtgc cagcacaatc aattgcccgc tattttcctg
     2461 ccagtccagc tctgcatcca ccagtgacgg ttcctgcggc aagtttaacg tcgcagtagc
     2521 atgcccactt acaggaagtc catccggcac gagcggcata gtaaattccc ccaccagttt
     2581 aaccggcggc tgatattcaa acgcgatgac atccagttcg ctgactgtaa gttgttgccc
     2641 tttcagctgg ccttgaaatt taactttttc gccctgataa cgcagttgct ggatatcaga
     2701 ggttaatgcg agagagagtt ttccctgcca ttcctgccag ggagaaaaaa tcagtttatc
     2761 gatattgatc caggtgttag gcagcatgga ctgccactgc gcgagggttt ttggagcagc
     2821 tggcgattgc tccgtctgcg gcaatttcgc cagacaagca gaatcaagtt ctaccgtgcc
     2881 gacgttcaat aaccagcggc tgggatgtga aaggctggcg ttggtgatat gtgcaagctg
     2941 acaatctccc accagataac ggagatcggg aatgattaaa cctttacgcg taatgcgtgg
     3001 gctttcatct aatgcaatac gtgtcccgag cggtagccag atgcccgcca gcgtgggaac
     3061 ccacagcccg agcgtcatca gcagcgtcaa cggcacaaga ataatcagta ataacagcgc
     3121 gagaacggct ttatatttac ccagcatggg tagttaatat cctgatttag cgaaaaatta
     3181 agcattcaat acgggtattg tggcatgttt aaccgttcag ttgaaggttg cgcctacact
     3241 aagcatagtt gttgatgaat ttttcaatat cgccatggtt ttcaattata tttgaaattt
     3301 tgtaaaatat ttttagtggc ttaaatgtga ttcaacatca ctggagaaag tcttatgaaa
     3361 ctcgccgttt atagcacaaa acagtacgac aagaagtacc tgcaacaggt gaacgagtcc
     3421 tttggctttg agctggaatt ttttgacttt ctgctgacgg aaaaaaccgc taaaactgcc
     3481 aatggctgcg aagcggtatg tattttcgta aacgatgacg gcagccgccc ggtgctggaa
     3541 gagctgaaaa agcacggcgt taaatatatc gccctgcgct gtgccggttt caataacgtc
     3601 gaccttgatg cggcaaaaga actggggctg aaagtagtcc gtgttccagc ctatgatcca
     3661 gaggccgttg ctgaacacgc catcggtatg atgatgacgc tgaaccgccg tattcaccgc
     3721 gcgtatcagc gtacccgtga cgctaacttc tctctggaag gtctgaccgg ctttactatg
     3781 tatggcaaaa cggcaggcgt tatcggtacc ggtaaaatcg gtgtggcgat gctgcgcatt
     3841 ctgaaaggtt ttggtatgcg tctgctggcg ttcgatccgt atccaagtgc agcggcgctg
     3901 gaactcggtg tggagtatgt cgatctgcca accctgttct ctgaatcaga cgttatctct
     3961 ctgcactgcc cgctgacacc ggcaaactac catctgttga acgaagccgc cttcgatcag
     4021 atgaaaaatg gcgtgatgat cgtcaatacc agtcgcggtg cattgattga ttctcaggca
     4081 gcaattgaag cgctgaaaaa tcagaaaatt ggttcgttgg gtatggacgt gtatgagaac
     4141 gaacgcgatc tgttctttga agataaatcc aacgacgtga tccaggatga cgtattccgt
     4201 cgcctgtctg cctgccacaa cgtgctgttt accgggcacc aggcattcct gacagcagaa
     4261 gctctgacca gtatttctca gactacgctg caaaacttaa gcaatctgga aaaaggcgaa
     4321 acctgcccga acgaactggt ttaatgttgc agctcccctg caatccaggg gagctgattc
     4381 agataatccc caatgacctt tcattctcta ttcttaaaat agtcctgagt cagaaactgt
     4441 aattgagaac cacaatgaag aaagtagccg cgtttgttgc gctaagcctg ctgatggcgg
     4501 gatgtgtaag taatgacaaa attgctgtta cgccagaaca gctacagcat catcgctttg
     4561 tgctggaaag cgtaaacggt aagcccgtga ccagcgataa aaatccgcca gaaatcagtt
     4621 ttggtgaaaa aatgatgatt tccggcagca tgtgtaaccg ctttagcggt gaaggcaaac
     4681 tgtctaatgg tgaactgaca gccaaagggc tggcaatgac ccgtatgatg tgcgctaacc
     4741 cgcagcttaa tgaactcgat aacaccatta gcgaaatgct gaaagaaggt gcacaagtgg
     4801 atctgaccgc gaaccagtta acgctggcga ccgcgaaaca gacattaact tataagctgg
     4861 cggatttaat gaattaatag ctgccacagc tcccggcggc aagtgactgt tcgctacagc
     4921 gtttgccgtt gggtaatgca cacatcccaa tcgccgtgcc atccagttga cgggcaacag
     4981 aaagcgaacc gccgatcatt gcacaatttg cttctccact actggacatc gacgctttta
     5041 aacctggcgc tacgtgcgcc gcagtcgcct gctgaacagg ttcactacta cacgccgaca
     5101 acaataaagc ggcacaccct acccaaaacg ctgctcgcat cttttcttcc tctgatcttc
     5161 aagccaaacg acaccgccat aaataatagg cagcacagag ggcgacatcg agagctgtcc
     5221 tgcgcgttgc cccgcatttt tactttttta tggctatttt tttgccctct gtttgatcaa
     5281 aacattcatt acgctgatgt gggggacaca aaagcgaaaa tgcagaagaa agccatttgc
     5341 taaaattgaa agattactac tgggcgcgca gcaatttcgt gcgcccctca tttgcgcaat
     5401 gtaagggtgt catatgatta ctattgacgg taatggcgcg gttgcttcgg tggcgtttcg
     5461 caccagtgaa gttatcgcca tctaccctat tacccccagt tccacgatgg cagaacaggc
     5521 tgatgcctgg gccggaaacg gcttgaagaa cgtttgggga gacacaccac gcgtggttga
     5581 aatgcagtcg gaagcgggtg ctatcgctac cgtgcatggc gctttgcaga cgggtgccct
     5641 ttcaacatcg tttacgtcat cgcagggttt gctgctgatg atcccgacac tgtacaaact
     5701 ggcaggcgaa ctcacaccgt ttgtcctgca tgtagcggca cgtaccgttg ccacacatgc
     5761 actctctatt tttggcgatc attccgacgt catggcggtg cgccagacgg gttgcgcgat
     5821 gttgtgtgcg gcaaacgtcc aggaagcgca agactttgct ctcatttcgc acatcgcgac
     5881 gctgaaaagc cgcgtgccat ttattcattt ctttgatggt ttccgcacgt cccacgaaat
     5941 caataaaatt gtcccgctgg ccgatgacac gattcttgat ctcatgccgc aggccgaaat
     6001 tgatgctcat cgcgcccggg cgctcaaccc ggaacatccg gtgatccgtg gtacgtccgc
     6061 caatcctgac tcttatttcc agtctcgcga agccaccaac ccctggtaca acgcagtcta
     6121 tgaccatgtt gaacaggcga tgaatgattt ctctgccgcg acaggtcgtc agtatcagcc
     6181 gtttgaatat tacgggcatc cgcaagctga acgggtgatt atcctgatgg gctcagccat
     6241 tggcacctgt gaagaagtgg ttgatgaatt gctaacccgt ggcgaaaaag tcggcgtgct
     6301 gaaagttcgc ctgtaccgcc ccttctcagc caaacacttg ctacaaactc taccgggatc
     6361 cgtacgcagc gtggcggtac tggacagaac caaagaaccc ggtgcccagg cagaaccgct
     6421 ctatctggat gtgatgaccg cactggcaga agcctttaat aatggcaagc gcgaaactct
     6481 gccccgtgtc attggtgggc gctatggtct ttcatccaaa gaatttggcc cggactgtgt
     6541 actggcggta tttgccgagc tcaacgcggc taaaccgaaa gcgcgcttta cggttggtat
     6601 ttacgatgat gtaaccaatc tgtccctgcc gttgccggaa aacacccagc caaactcggc
     6661 gaaacttgaa gccttgtttt atggccttgg tagtgatggc agcgtttccg cgaccaaaaa
     6721 caatatcaag attatcggta attccacgcc gtggtacgca cagggctatt ttgtttacga
     6781 ctccaaaaaa gcgggcggcc tgacggtttc tcaccttcgc gtgagcgaac agccgattcg
     6841 ttccgcttat ctcatttccc aggctgattt tgttggctgc caccagttgc agtttatcga
     6901 taaatatcag atggctgagc gtttaaaacc tggcggcatt ttcctgctca acacgccgta
     6961 cagcgcagat gaagtgtggt cgcgcttgcc gcaagaagtt caggccgtgt taaaccagaa
     7021 aaaagcgcgc ttctatgtga ttaacgcggc gaaaatcgcc cgcgaatgtg gcctggcggc
     7081 ccgtattaat accgtcatgc agatggcttt tttccatctg acgcaaattc tgcctggcga
     7141 tagcgccctc gcagaattgc agggtgcgat tgccaaaagt tacagtagca aaggccagga
     7201 tctggtggaa ggcaactggc aggctctggc gctggcgcgt gaatccgtag aagaagttcc
     7261 gttgcaaccg gtaaatccgc acagcgccaa tcgaccgcca gtggtttccg atgccgcccc
     7321 tgatttcgtg aaaaccgtaa ccgcagcgat gctcgcaggg cttggtgatg ccctccccgt
     7381 ttcggcgctg ccgccagacg gcacctggcc gatggggacc actcgctggg aaaaacgcaa
     7441 tatcgccgaa gagatcccca tctggaaaga ggaactctgt acccaatgta accactgcgt
     7501 cgccgcttgc ccacactcag ctattcgcgc aaaagtggta ccacccgaag cgatggaaaa
     7561 cgcccctgcc agcctgcatt cgctggatgt gaaatcgcgt gatatgcgcg ggcagaaata
     7621 tgtcttgcag gtggctccgg aagattgcac cggttgtaac ctgtgcgtcg aagtttgccc
     7681 ggcgaaagac cgtcagaatc cagagattaa agccatcaat atgatgtcgc gcctggaaca
     7741 tgtcgaagaa gagaaaatca attacgattt cttcctcaac ctgccagaaa tcgaccgtag
     7801 caaactggaa cgtattgata ttcgtacatc gcagctgatt acaccgctgt ttgaatattc
     7861 cggtgcttgc tccggttgtg gcgagacgcc gtatattaaa ttgctgactc agctctatgg
     7921 cgaccggatg ttgatcgcta acgccaccgg ctgttcttca atttatggcg gtaacctgcc
     7981 ctctacaccg tataccaccg atgccaacgg tcgtgggccg gcatgggcga actctctatt
     8041 tgaagataat gccgaatttg gccttggttt ccgcctgacg gtcgatcaac accgtgtccg
     8101 cgtgctgcgt ctgctggatc aatttgccga taaaatcccg gcggaattac tgacggcgtt
     8161 gaaatcagac gctacgccag aggttcgtcg agaacaggtc gcagctttac gccagcaact
     8221 caacgatgtt gccgaagcac atgaactgct acgtgatgca gatgcactgg tggaaaaatc
     8281 aatctggctg attggtggtg atggctgggc ttacgatatc ggctttggcg gtctggatca
     8341 tgtattgagt ttgacggaaa acgtcaacat tctggtgctg gatacgcaat gctattccaa
     8401 caccggtggt caggcgtcga aagcgacacc gctgggtgca gtaactaaat ttggcgagca
     8461 cggcaaacgt aaagcgcgta aagatcttgg cgtcagtatg atgatgtacg gtcatgttta
     8521 tgtggcgcag atttctctcg gcgcgcagct gaatcagacg gtgaaagcga ttcaggaagc
     8581 ggaagcgtat ccgggaccat cgctgatcat tgcttatagc ccgtgtgaag agcatggtta
     8641 cgatctggca ctcagccatg accagatgcg ccaactcaca gctaccggct tctggccgct
     8701 atatcgcttc gatcctcgtc gtgccgatga aggcaaactg ccgctggcgc tggattcacg
     8761 cccgccgtca gaagcactgg aagaaacgtt acttcacgag caacgtttcc gtcgtctgaa
     8821 ttcgcagcag ccagaagtgg cagaacagtt atggaaagat gctgcagctg atttgcaaaa
     8881 acgctatgac ttcctggcac aaatggccgg aaaagcggaa aaaagcaaca ccgattaaat
     8941 gctctggata aggattatcc aattctaaaa aaaagcccgg acgactgttc gggcttgtct
     9001 ttttatatgt tggaaaatca gtggcaatgc aatggcccaa cagaaaataa aatctgtgac
     9061 aataaaggca tataacccgc gcagaataac gtatagaaaa ttaaaagtat aatttttatt
     9121 ttgtatgtat tatcttcgat acattcacca gacttattat catttcagaa gaattatttg
     9181 attaaggttt tacttaaggc gtaacaaatg atatttatcg gctaactgaa cttctccttt
     9241 aggatgtttt cactccccgg aatggggata aaaggcaaat aaaataacta aaggatttat
     9301 tcaatgaaaa gcaaagtact ggcactttta attcctgccc tgctcgccgc aggtgctgca
     9361 catgcagccg aagtttataa taaagacggc aacaaattag atctgtatgg caaagttgat
     9421 ggcctgcatt atttttctga taattcagcg aaagatggcg atcagagcta tgcgcgtctg
     9481 ggttttaaag gcgaaaccca aattaacgat caactcactg gctacggtca atgggaatac
     9541 aatattcaag caaacaacac tgaatcttca aaaaaccagt catggacccg tctggcattt
     9601 gccgggctga aatttgcaga ttacggttct ttcgattacg gacgtaatta tggcgtaatg
     9661 tacgacatcg aaggctggac cgatatgctg cctgaatttg gcggtgactc ttataccaat
     9721 gcagacaact ttatgactgg tcgagccaat ggcgtcgcga cttatcgtaa tactgatttc
     9781 ttcggtctgg taaatggtct gaacttcgcg gtgcagtatc aaggtaacaa cgaaggagcc
     9841 agtaatggtc aggaaggcac caacaacgga cgtgatgttc gccatgaaaa cggtgacggc
     9901 tggggttttt ccacaacata tgatttaggc atgggcttta gcgctggtgc ggcatacacc
     9961 tcttctgacc gcaccaatga ccaggttaac catactgcgg cgggtggtga taaagcagac
    10021 gcgtggactg ctgggctaaa atacgatgct aacaatattt acctggcaac catgtattca
    10081 gaaacgcgta atatgacccc gtttggcgac agcgattatg ctgtggcaaa caaaacccag
    10141 aattttgaag tcactgccca gtaccagttt gattttggtc tgcgtccggc agtctctttc
    10201 ctgatgtcta aaggccgtga cctgcacgct gccggtggtg cagacaaccc ggcaggtgtt
    10261 gatgataaag atctggttaa atacgccgat gttggcgcga cttactattt caataaaaac
    10321 atgtccacct acgttgacta taaaatcaac ctgttggatg aagatgacag cttctacgct
    10381 gccaatggca tctctaccga tgatattgtc gctttaggtc tggtttatca gttctaaatc
    10441 ctcctgcccg ctgttatggc gggctttttc tgcttattct tcctcctttg atctaaatta
    10501 aaaatgtgaa ctccatcatt acacaaaaag tgtcatctgg cgttacactt tatgcggata
    10561 ctaaaacagg aggttttatg aacagaacga ttcttgtccc tatcgatatt tccgattcag
    10621 aattaactca acgcgtgatt agccacgttg aggcagaggc aaagattgac gatgcagagg
    10681 ttcatttcct gacggtaata ccttcactgc cctactatgc ctctctgggt ttagcgtatt
    10741 ccgcagaatt accggcaatg gatgacctga aagcggaagc caaatcgcaa ctggaagaga
    10801 tcattaaaaa atttaaactg ccaaccgaca gagtgcatgt ccatgttgag gaaggctcgc
    10861 ccaaagaccg cattctggaa ttggcgaaga agatccccgc tcatatgatc atcattgctt
    10921 cccatcgacc ggatatcacc acttatctgc tcggttccaa cgccgcagct gtagtgcgtc
    10981 acgcagagtg ctccgtgctg gttgtgcgct gacactaacg cccgcacatt gctgcgggct
    11041 ttttgattca tttcgcaaat gtgctgacat tttcccctct aatccgtacc atacacgcca
    11101 ctgtttttat atcagatttc ttatgctggg cattccggca tgacgcatac tcttctgatg
    11161 ccatataacg aattgagtcg cttttaaatg tcgcaaaatc aagaaattag taagaaagaa
    11221 caatacaacc tgaacaagta agggcaaaaa tcacaactat ctgactcata agtattttat
    11281 ttatttttca atatgttaaa cattatcagc gacaacaata agctacgata acccactctt
    11341 tttttgcccc atttttgcca tcaacaattt tcctcataaa gtcatttcaa agcctaatag
    11401 ctgctctact tttttcctca atatcatgtc gccagcagga aacaacctaa tccctgtttt
    11461 aggcctcaaa gctgttaatg ataattattt tcattttgta taggttatgc tataaaacat
    11521 agccgttgct atgtttgttc taattttgct cactataggt actaaattat gcactcaata
    11581 aaaaaagtaa ccatgctctt ggggtgcctc gccctcacct gctcgatcgc atttcaggca
    11641 agtgcaactg aaaaattcaa ggtcattaca acatttacca tcatcgcgga tatggccaaa
    11701 aacgtggctg gagatgctgc agaagtctca tccataacca agcctggtgc agaaattcat
    11761 gagtatcagc ctacccctgg cgatattaaa cgtgcacagg gggcacaact gattctcgcc
    11821 aatggtatga atctggaatt gtggttccaa cgcttttacc agcatctcaa tggggttcca
    11881 gaagtaattg tctcttcggg tgtgacgcca gtagggatca ccgaaggacc ctatgagggc
    11941 aaacctaatc cccatgcatg gatgtcgcca gataatgctc tgatttacgt cgataatatt
    12001 cgtgatgcgt tgataaaata cgatccggca aatgcacaaa cctaccaacg taatgccgat
    12061 acttataaag ccaagattac ccaaaccctt gcccccctgc gtaagcagat tacggaactc
    12121 cctgagaatc agcgatggat ggtcaccagt gaaggggctt tttcttatct cgcacgcgat
    12181 ttggggctaa aagagcttta tctgtggccg attaatgccg atcaacaagg aacaccgcag
    12241 caggtacgta aggttgttga tatagttaag aaaaatcata tcccggcagt ctttagcgag
    12301 agtacgattt ccgataaacc agcgcgtcag gttgcgcgtg aaaccggcgc acactacggc
    12361 ggtgtgctct atgtcgattc cctgagcaca gaaaacggcc cggtacctac gtatatcgac
    12421 cttcttaagg ttactaccag tacgctggta cagggaatta aagccgggaa aagggagaaa
    12481 taatgatgca atctgcaggc attgtcgtta atgatgttac tgtcacctgg cgtaacgggc
    12541 acacagcact gcgcgatgca tccttcacag taccaagtgg atctattgcc gctctggttg
    12601 gggtaaacgg ttccggaaaa tcgacgttgt ttaaagcgat tatgggattt gtgcgtctga
    12661 ccagcggaaa gatatctgtt ctgggtattc ccacgcgaca ggcgctacag aaaaacctgg
    12721 ttgcctacgt ccctcagtca gaagaggttg actggtcatt tcctgtactg gtggaagatg
    12781 tggtgatgat gggccgctat gggtatatgg gtatgttgcg tatagccaaa aagagggatc
    12841 gtcagattgt caccgatgcg ctggaacgtg tcgatatggt ggattttcgc catcgtcaaa
    12901 tcggcgagct ttccggtgga caaaagaaac gcgtctttct ggcgagagcg attgcacagc
    12961 agggtgatgt gatcctgctg gatgaacctt ttaccggcgt tgatgtgaaa accgaagcga
    13021 aaatcatcag cctgttgagg gagttacgcg cggaaggcaa aacgatgctt gtctcaacgc
    13081 acaatctcgg ctcagtcacg acattttgcg attatacggt catggtcaaa ggcaccgtcc
    13141 tggcaagcgg gccgacagac accactttta cagccgagaa cctggagctg gcttttagcg
    13201 gcgtactgcg ccatgtcaca cttaacggct cggaagaaag cattattact gacgatgaac
    13261 gcccttttgt ggcacatcga ccgtcagcgg tgcagaggga agcaagatga acgtgctact
    13321 ggaacccttc agctatgaat atatgctcaa tgcgatgtgg gtctcggcaa tggtcggcgg
    13381 tctctgcgct ttcctgtcat gctatctgat gctaaaaggc tggtcgctga ttggcgatgc
    13441 gctgtcgcac tctattgtcc cgggtgttgc gggggcatat atgctggggc ttccgttttc
    13501 tctgggagcc ttcttttccg gcggactggc agcgggcagc atgctgtttc ttaaccaacg
    13561 cacccgctta aaagaagatg ccatcatcgg cctgatcttc tcgtcctttt ttggcctggg
    13621 gctgtttatg gtgtcattga acccgacatc cgtgaacatt cagaccatcg tcctgggcaa
    13681 tattctggca atcgatccgg cggatatcct gcaactcact atcattggca ttctctcgat
    13741 catcgtgctt tttttcaaat ggaaagatct tatggtgacc tttttcgacg agaatcacgc
    13801 ccgtgctatt ggattacatc cgggcagatt aaaaatcctc ttcttcaccc tgctgtcggt
    13861 ttcgaccgtt gcggcgctgc aaacggttgg tgcctttctg gtgatctgtc tggtggtgac
    13921 tcccggtgca acagcatggt tgttaaccga tcgttttccc cgcctgctca taattgctgt
    13981 aactattggc agtgtaacca gtttcctcgg cgcgtgggtc agttactttc tggacggcgc
    14041 gacaggtgga atcatcgtgg tggcgcagac actgctgttt cttttagcat ttgtatttgc
    14101 gcccacccat ggacttttgg caaatcgtcg gcgtgcgcat aaagcgctgg aggatcgctc
    14161 atgatggcat tattactgga gccactgcag ttcaccttta tgagtcacgc actgctgatt
    14221 tcactggtag tttccatacc ctgtgcgctg ctgtcggtct ttctggtcct gaaaggttgg
    14281 gcactgatgg gtgacgcgat gagtcatgcg gtttttcctg gcatcgtgct tacctggatt
    14341 ctggggttac ctctggctac aggggcattc gtcgccggag tattctgcgc ggtggcgacg
    14401 ggatacctga aagacaacag ccgaatcaag caagatacag ttatggggat tgttttttct
    14461 ggcatgtttg ccgcaggtct gatcttgtat attgcaatca aaccagacgt acatcttgac
    14521 catattcttt tcggcgacat gctcgggata accatcggcg atataatcca gacggtgatt
    14581 attgccgggc tggttacact tgttattagc gtaaaatggc gggatttttt gctgttcagc
    14641 tttgattatc aacaggcgca ggtaagcggt ttgcatacga gatggctgca ttatgggctg
    14701 ctgtgcatgg tttccctgac cattgtggcg acgctgaaag cagtaggtat cattctctct
    14761 atttctctgc tcattgcgcc tggcgccatt gcagtactcc tgacacaacg ctttcatatt
    14821 gcgctcctac tggcgactgg catatcggta atagtgtcaa tgactggtgt ctggctgtcc
    14881 ttttttatcg acagcgcacc agctccgacg attgtcgtct tattcgcggt cgtgttcatc
    14941 atgacgttta ccgttaccag catcaacgca cgcacaaagg gaaacgccca tacacaggat
    15001 ctgttatcac ccaattagca caatatccga ggacagcatc gtccgccagc gtccgccagc
    15061 ctacagaagt tcggaaagcc atggaaggtc gttgggagga ggtacgaatt ctatcatgca
    15121 aaaaatacgt aaaatcgata acgcctagaa atcattcaat actcgcacta tcgaaagttt
    15181 accagccaac cgcggcacgt tcctgcatac gacgtgccgc agcttctgtt attccacgat
    15241 aaaattccta accgaattca aatccttcag actattcagc tcttccttca gctcccgctg
    15301 acggcgataa atcgtaagcg ccccgagaag tacgtagcgt aaggattatt ttacagacga
    15361 gaagtt
//
LOCUS       DADMJE010000097        15313 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.098, whole genome shotgun sequence.
ACCESSION   DADMJE010000097 DADMJE010000000
VERSION     DADMJE010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15313
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.098"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(21..464)
                     /locus_tag="JN001_002649"
     CDS             complement(21..464)
                     /locus_tag="JN001_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000829114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY9053833.1"
                     /translation="MAELQKVDDWLSALLANLEPAARSRMMRQLAQELRRTQQQNIRM
                     QRNPDGSSYEPRRVTARSKKGCIKRQMFTKLRTTKYLKTAASADSASVQFEGRVQRIA
                     RIHHYGLSDRVSRKGIYTIYAKRQLLGFNVQSIELIERMFIKNLT"
     gene            complement(457..888)
                     /locus_tag="JN001_002650"
     CDS             complement(457..888)
                     /locus_tag="JN001_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053834.1"
                     /translation="MNKPQSLRHALNKAVPYVRNNPDKLHLFVDNGSLVASGASSMSW
                     EYRYTLNVVIEDFSGDQNLLMAPVLLWLRDNQPDAINNPALREKLFTFEVDILRNDVC
                     DISLNLQLTERVLVSTDGSVSNVEAVAEPDEPEEMWTVKRG"
     gene            complement(984..1412)
                     /locus_tag="JN001_002651"
     CDS             complement(984..1412)
                     /locus_tag="JN001_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysB family phage lysis regulatory protein"
                     /protein_id="HAY9053835.1"
                     /translation="MNRLLLVVLALLLAALGWQTWRLADASQTISTQADELQSKSQAL
                     AKSNSQLISLSILTETNNREQARLYAEAEQTSVLLRQRQRRIEELKRENEDLRRWADT
                     PLPADIIRLRERPALTGGAAYRQWLSASDAVSAGAGSAAH"
     gene            complement(1409..1786)
                     /locus_tag="JN001_002652"
     CDS             complement(1409..1786)
                     /locus_tag="JN001_002652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000730949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053836.1"
                     /translation="MKKKLISGLFLMLWMALLIAAMVYPQGIFPVLAASGVWVACLLT
                     WAVIPVALASLIKNGPLWQELRASLLKTITRKENVFISWVIRLLIVVSLAWTGWAITL
                     VFYLLTVIAFWITHNQMAQQVAA"
     gene            complement(1788..2300)
                     /locus_tag="JN001_002653"
     CDS             complement(1788..2300)
                     /locus_tag="JN001_002653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001069913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY9053837.1"
                     /translation="MNPSIVKRCLVGAVLAIAATLPGFQQLHTSVEGLKLIADYEGCR
                     LQPYQCSAGVWTDGIGNTSGVIPGKTITERQAAEGLISNVLRVERALEKCVKQQPPQK
                     VYDAAVSFAFNVGTGNACSSTLVKLLNQRRWADACRQLPRWVYVKGVFNQGLDNRRAR
                     EMAWCLQGAN"
     gene            complement(2281..2496)
                     /locus_tag="JN001_002654"
     CDS             complement(2281..2496)
                     /locus_tag="JN001_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053838.1"
                     /translation="MTLERISAFITYCIAVVLAWLGDLSIKDASTLGGLMIGVLMLAI
                     NWYYKHKAYQLLRDGQISREDYESINR"
     gene            complement(2500..2703)
                     /locus_tag="JN001_002655"
     CDS             complement(2500..2703)
                     /locus_tag="JN001_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_461645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053839.1"
                     /translation="MKVRAHQYDTVDALCWRHYGRTQGVTEQVLKANPGLAEYGPFLP
                     HGLQVELPDIPTTTTVQTVQLWD"
     gene            complement(2703..3167)
                     /locus_tag="JN001_002656"
     CDS             complement(2703..3167)
                     /locus_tag="JN001_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY9053840.1"
                     /translation="MKFVAPEQAPEQAEIIRNTPFWPDVDLSEFRSVMRTDGTVTQPR
                     LKQVALSEISEVNAELYEFRRRQQMLGYASLAEVPAEQLDGKSERIQHYFNAVYCWAR
                     AMLNERFQDYDATASGAKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI"
     gene            complement(3263..3913)
                     /locus_tag="JN001_002657"
     CDS             complement(3263..3913)
                     /locus_tag="JN001_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase endonuclease subunit"
                     /protein_id="HAY9053841.1"
                     /translation="MSLSPARQHRLRVQAEQAVREGGSVRHASGYDLMLLQLAEDRRR
                     LKGVQSTVKKAEIKVELLPKYAAWAEGVLAAGGAQQDDVLMYVMLWRIDAGDYAGALE
                     IGRHALRHGWVMPLGNRNVQTVLTEEMADAAQSAMLAATGFDADLLLQTLELTDGLDM
                     PDQSRARLHKAIGAVLSESNPASALNHLNHALQLDPRCGVKKDKQQLERRLRNDSR"
     gene            complement(3917..4975)
                     /locus_tag="JN001_002658"
     CDS             complement(3917..4975)
                     /locus_tag="JN001_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein, P2 family"
                     /protein_id="HAY9053842.1"
                     /translation="MKKNTRFAFNAYLQQLARLNGVAVEELSSKFTVEPSVQQTLEDQ
                     IQQSAAFLTLINVTPVTEQSGQLLGLGVGSTIAGTTDTTAKEREPVDPTLMVDVEYKC
                     EQTNFDTVLTYAKLDLWAKFQDFQVRIRDAIVKRQALDRIMIGFNGVKRAKTSNRSEN
                     PLLQDVNKGWLQKIREDAPDHVMGSTTTGGETTPGAVKVGKGGEYANLDAVVMDAVNE
                     LIDVVYQDDDDLVVICGRELLSDKYFPLVNKEQENSEKLAADMIISQKRMGGLQAVRA
                     PFFPPNALLITRLDNLSIYWQEDTRRRSVIDNPKRDRIENFESVNEAYVVEDYRCAAL
                     VENIQISDFSAAAAETGA"
     gene            complement(4992..5825)
                     /locus_tag="JN001_002659"
     CDS             complement(4992..5825)
                     /locus_tag="JN001_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HAY9053843.1"
                     /translation="MTVKAKRFRIGVEGATTDGREIQREWLEQMAASYNPAVYTALIN
                     LEHIKSYLPDSTFNRYGKVTALFAEEITEGPLAGKMALYADVEPTESLVELVKKGQKL
                     FTFMEVSPKFADTGKAYLVGLAATDDPASLGTEMLTFSASAAHNPLANRKQNPANLFT
                     AAEETVIELEEVQDDKPSLFARVTALFTKKEQSDDARFSDVHKAVELVATEQQNLSAR
                     TEKSLSEQEERLSELETALQAQQTAFNELVDKLSHEDSRQDYRQRATGGNAPADTLTN
                     C"
     gene            5968..7734
                     /locus_tag="JN001_002660"
     CDS             5968..7734
                     /locus_tag="JN001_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase ATPase subunit family protein"
                     /protein_id="HAY9053844.1"
                     /translation="MNTTLTPADLDPRRQAMLLYFQGYRVARIAEMLGEKVATVHSWK
                     KRDKWGDYGPLDQMQLTTAARYCQLIMKEHKEGKDFKEIDLLARQSERHARIGKFNNG
                     GNEADLNPNVANRNKGPRRQPEKNVFTDDQIEKLEKIFHSSMFNYQRHWWEAGKTNRI
                     RNLLKSRQIGATFYFAREALIDALLTGRNQIFLSASKAQAHVFKQYIIDFAKEVEVEL
                     KGDPMVLPNGATLYFLGTNARTAQSYHGNLYLDEYFWIPKFQELRKVASGMAIHKKWR
                     QTYFSTPSSLTHSAYPFWSGALFNRGRNKADKVDIDLSHSNLAPGRLCADGQYRQIVT
                     VEDAVRGACNLFDLDQLRMEYSPDEYQNLLMCEFVDDLASVFPLSELQACMVDSWEVW
                     TDFHALALRPFGWREVWIGYDPAKGTQNGDSAGCVVVAPPAVPGGKFRILERHQWRGM
                     DFRAQADAIKKLTEQYNVTYIGIDSTGVGHGVYENVKAFFPAVREFVYNPNVKNALVL
                     KAYDIISHRRLEFDAGHTDIAQSFMAIRRATTASGNRPTYEASRSEEASHADLAWATM
                     HALFNEPLQGESANTSNIVEIF"
     gene            7734..8765
                     /locus_tag="JN001_002661"
                     /pseudo
     CDS             7734..8765
                     /locus_tag="JN001_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000520363.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
     gene            complement(8872..9753)
                     /locus_tag="JN001_002662"
     CDS             complement(8872..9753)
                     /locus_tag="JN001_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053845.1"
                     /translation="MKWAIEMNKLKRPVFKDYSAFKKLSANKRLKHHSVLNGQDTFIL
                     NAYRSYIKNKGYLNVNSCGVLSNNIAEALRYYYNNPAKCLSIIDDIRAANSNSLCPMC
                     GSMHSGTLDHVLPKENYPEFSLFTKNLVPACKCNTFKSTTIANSAGHRMLHPYFDNIL
                     KQRLICANFSKLGRTPTIDVKIIIDPMSPEYNNVKYHLDNVVIKNNIKGYLSEQWESF
                     YLYPELVIRGLNKSLSTYSDVYELLTRELLLLDEKHKGKNNWNSVFVAGLIRPDVIRW
                     ILCELHLGNRSPDGRLI"
     gene            complement(9737..11386)
                     /locus_tag="JN001_002663"
     CDS             complement(9737..11386)
                     /locus_tag="JN001_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000960487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY9053846.1"
                     /translation="MLVKKNKNYSLYFLITNNQQISDSGNYIKIVPSRSDWNDFGYLS
                     RVEISIFNKKECKDIISLNGYIGFLNSEEERNGKAELIRRVKKKEESNLKDEGFNDYF
                     VMLQDMNNYRRLVRFFGVNESKYILNFINDVVSKKSDASAENSRKKAISSDIFNKSFI
                     RESESYFTFKNAGTVLSGIQYEELGNLSQHIKISYSNKVNEEDVSYVFNFDHEHDLPK
                     RISIIIGENGVGKSQTLREIALAAIKGKDNLVAVVDSNGVSIEERIQISRLIAFSPTN
                     ESKCSFPTDKRIKSLIWYKRLTLNRESKSKLNLNDLIVQLARSNDAIGYNQRWNIFVD
                     ALSVLNSNNDLVIKCGGENSPFVKLNELNSRGEESRLSLYSEIILSGEPLRLIENKCY
                     PLSSGEISFIKFCVQVCLYIENGTLLLIDEPETHLHPSFINKFMALLDNLLEKTGSSA
                     IIATHSVYLVREVFKEQVTILRRRDDGVIVSEKPRLSTFGANIGNISYFVFGESEPTQ
                     ILNKVKNNIIAKNMSWDDVESKYSEDLSLNVLTALRNEMGN"
     gene            complement(11679..11912)
                     /locus_tag="JN001_002664"
     CDS             complement(11679..11912)
                     /locus_tag="JN001_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY9053847.1"
                     /translation="MRIEIMIDKEQKISQSTLDALESELYRNLRPLYPKTVIRIRKGS
                     SNGVELTGLQLDEERKQVMKIMQKVWEDDSWLH"
     gene            complement(11923..12111)
                     /locus_tag="JN001_002665"
     CDS             complement(11923..12111)
                     /locus_tag="JN001_002665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053848.1"
                     /translation="MQDYFLESLKLQRIDFFLKLVAASECSDEEKGLALQWVSELTDE
                     LMAKIRTHEYNRSMDVIS"
     gene            complement(12265..14679)
                     /locus_tag="JN001_002666"
     CDS             complement(12265..14679)
                     /locus_tag="JN001_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000017528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication endonuclease"
                     /protein_id="HAY9053849.1"
                     /translation="MSHADMNNCCGFNEAAAAFSWNSPKKAINPYLDPAEVAPVSALS
                     NLITLYAADNEQEQLRREALSDQVWERYFFYESRDPVQHEMEQDKLISRAKLAHEQQR
                     FNPDMVILADVNAQPSHISKPLMQRIEYFSSLGRPKAYSRYLRETIKPCLERLEHVRD
                     SQLSASFRFMASHVGLDGLLILPEMSQDQVKRLSTLVAAHMSMCLDAACGDLYATDDV
                     KPEEIRKTWEKVAAETLRLDVIPPAFEQLRRKRNRRKPVPYELIPGSLARMLCADWWY
                     RKLWKMRCEWREEQLRAVCLVSKKASPYVSYEAVMHKREQRRKSLEFFRSHELVNEEG
                     DTLDMEDVVNASSSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHSTLNN
                     GRPNPTWTNATVRQSSDYLVGMFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCF
                     MRKKDRRAITALLRKFAIREDREELGNNTGPRFKSELINPRKGTPTSYIAKYISKNID
                     GRGLAGEISKETGKSLRDNAEYVNPWASLHRVQQFRFFGIPGRQAYRELRLLAGQAAR
                     QQGDKKAGAPVLDNPRLDAILAAADAGCFATYIMRQGGVLVPRKYHLIRTAYEINEEP
                     TAYGDHCIRIYGIWSPIAEGKICTHAVKWKMVRKAVDVQEAAADQGACAPWTRGNNCL
                     LAENLNQQEKDKSADGNPRTDITSMDDKELHDYLHSMSKKERRELAARLRLVKPKRRK
                     DYKQRITDHQRLQLVYELKSRGFDGSEKEVDLLLRGGSIPSGAGLRIFYRNQRLQEDD
                     QWRNLY"
     gene            complement(14676..>15313)
                     /locus_tag="JN001_002667"
     CDS             complement(14676..>15313)
                     /locus_tag="JN001_002667"
                     /EC_number="2.1.1.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Dam family site-specific
                     DNA-(adenine-N6)-methyltransferase"
                     /protein_id="HAY9053850.1"
                     /translation="RVLFEIANREVAYYNIRQEFNYSTEITDFMKAVYFLYLNRHGYR
                     GLCRYNKSGHFNIPYGNYKNPYFPEKEIRAFAEKAQRATFICASFDETLAMLKAGDVV
                     YCDPPYDGTFSGYHTDGFTEDDQYHLASVLEHRSSEGHPVIVSNSDTSLIRSLYRNFT
                     HHYIKVKRSIGVAAGEGKSATEIIAVSGPRCWVGFDYSRGVDSSAVYGVRA"
BASE COUNT         3741 a         4137 c         3524 g         3911 t
ORIGIN      
        1 caattgaaaa caaataaaaa tcaagttagg tttttaatga acattctttc aattaactca
       61 atagattgga cattaaaacc taataactgc cttttcgcat agatggtata aatacctttt
      121 cgactgacgc gatcactcaa gccgtaatgg tgaatacggg caatgcgctg caccctacct
      181 tcaaactgta cgctggcaga atcggcgctg gctgcagttt tcaggtattt tgtggtgcgc
      241 agctttgtaa acatctgacg tttgatgcac ccctttttgc tgcgtgctgt taccctgcgc
      301 ggctcataac tgctgccatc aggattgcgc tgcatcctga tgttctgctg ctgtgtccgg
      361 cgcagttcct gcgccagctg gcgcatcatg cggcttcttg cggctggctc cagattcgcc
      421 aataatgcac tcagccagtc gtccaccttc tgcaattcag ccacgtttca ccgtccacat
      481 ttcttcaggt tcatcaggtt ccgctaccgc ttcaacgttc gacacactgc cgtcagtgct
      541 gaccagcaca cgctccgtca gttgcaggtt aaggctgata tcacagacat cgttgcgcag
      601 aatatccacc tcaaaggtga atagcttttc ccgtaacgcc gggttattga tcgcatcggg
      661 ctggttatcc cgcagccaca gcaaaaccgg ggccatcagc agattctggt cgccgctgaa
      721 atcttcaatc accacgttca gggtgtagcg gtactcccat gacatggagc tagccccgga
      781 ggcaaccagc gaaccgttat ccacaaacag atgcagtttg tccgggttat tacggacata
      841 aggcactgct ttattgaggg cgtggcgcag ggattgtggt ttgttcactg tttcgctcct
      901 gacacgcaat aatcatgtcc actttgtctg cacagaccgc ccaggcggcc tccgtttcat
      961 ccagcaacgc attcagatca ccgttagtgc gcggcgctgc ctgctccagc cgacacggcg
     1021 tcactcgcgg acaaccactg acggtaagct gcacctccgg tgagtgccgg acgttcccgc
     1081 agccggataa tgtcagcagg caaaggagta tcagcccagc gacgtaaatc ctcgttctca
     1141 cgtttcagtt cctcaatccg gcgttgtcgt tgtctcagca gtacactggt ctgttctgct
     1201 tcggcataga gccgcgcctg ctcccggtta ttggtttcag tcagaatgga caggctgata
     1261 agctggctgt tgctctttgc cagtgcctgg cttttgctct gcagctcgtc tgcctgcgtg
     1321 ctgatggtct ggctggcatc agccagccgc cacgtctgcc agcccagcgc cgccaataat
     1381 aacgccagca caaccagcag caaccggttc atgcggctac ctgttgcgcc atctgattat
     1441 gggtgatcca gaaggcaata acggtcagca gataaaagac cagggtaatg gcccaccccg
     1501 tccaggcgag actgacgaca atcagcaatc gtatcaccca gctgataaat acgttttctt
     1561 ttcgggtaat tgtcttcagt aaagatgccc tcaactcctg ccagagcggg ccattcttaa
     1621 ttaacgaagc cagtgctacc ggaattaccg cccatgtcag taaacaggct acccaaacgc
     1681 cggacgctgc cagtaccgga aaaatcccct gcggatacac cattgctgcg attaacagcg
     1741 ccatccataa catcagaaac agcccgctga ttaatttctt tttcatttca gtttgctccc
     1801 tgtaaacacc aggccatctc ccgcgcacgg cggttatcca gcccctgatt aaaaacacct
     1861 ttcacataaa cccagcgcgg caactgtcgg cacgcatccg cccagcgccg ctgattgagc
     1921 aatttcacca gcgtggaact gcaggcattg cccgtaccca cgttgaaggc aaacgacacc
     1981 gcagcgtcat acaccttctg cggcggctgt tgcttcacac acttttccag cgcccgctcc
     2041 acacgcagca cgttggagat cagcccttct gctgcctgtc gctccgtaat ggttttgccg
     2101 ggaatgacgc ccgacgtatt accaataccg tcggtccaga cacccgcgct gcactgatac
     2161 ggctgcagac gacaaccttc gtaatcggca atcagtttca gtccctccac ggaggtgtga
     2221 agctgctgaa aacccggcag cgtggcagca atagccagca cggccccgac aaggcagcgt
     2281 ttaacgattg atggattcat agtcctcccg cgagatctgc ccgtcgcgca gaagctggta
     2341 ggctttgtgt ttgtagtacc agttgatagc cagcatcagc acaccaatca tcaggccgcc
     2401 cagcgttgag gcatccttga tggacaaatc gcccagccag gccagcacga cggcgatgca
     2461 atacgtgata aaggcgctga ttcgctcaag cgtcataatt cagtcccata gctggacggt
     2521 ctgcacggtg gtggtggtcg gaatgtccgg cagctccacc tgcagcccgt gaggtaaaaa
     2581 ggggccgtat tcggcaagcc ccggatttgc cttcagtacc tgctccgtga caccctgcgt
     2641 gcgcccgtaa tgacgccagc aaagcgcgtc caccgtgtca tactgatgcg cacgcacttt
     2701 catcagataa gctccactgt gcagtgcggc gcgtcctgca cccggctgat ggcccagcgg
     2761 gcgtcacgcc acaaatcacc gcttgcttcc gccagttctt cgccccgctt cgcaccggat
     2821 gccgtggcgt catagtcctg gaaacgttcg ttgagcatgg cgcgagccca gcagtaaacc
     2881 gcgttgaaat agtgctgaat gcgctcactt ttcccgtcca gctgttccgc cggaacctca
     2941 gccagcgacg cataccccag catctgctgg cgtctgcgaa actcatacag ctctgcgtta
     3001 acctccgaaa tttccgacag tgcaacctgc tttaaacgcg gctgcgtcac cgtgccgtca
     3061 gtgcgcatga cactgcgaaa ctccgacagg tccacatcag gccagaacgg cgtatttcta
     3121 atgatttccg cctgttccgg tgcctgttct ggcgcaacaa acttcatgct gctttctcct
     3181 gaaataaagg gcggtggacg gggttttgat gtggctgtgc ctttcgccac cccgtgccgc
     3241 ccgtgcgcgg gggcacgttc tgtcagcggc tgtcattgcg cagtctgcgc tccagctgct
     3301 gtttgtcttt tttcacgcca cagcggggat cgagctgtaa cgcatggttg agatgattaa
     3361 gggcggaagc cggattgctt tcactcagga ccgcgccaat cgctttatgc agacgtgccc
     3421 gtgactggtc cggcatatcc agaccgtctg tcagctccag cgtctgcagc aacagatcgg
     3481 catcaaagcc ggtggcggca agcattgcgc tctgcgctgc atctgccatt tcctctgtca
     3541 gcacggtctg cacgttgcgg ttgcccagcg gcatcaccca tccatgacgc agggcatgac
     3601 gcccgatctc cagcgccccg gcataatctc cggcatcaat gcgccacaac atcacgtaca
     3661 tcagcacgtc atcctgttga gcgcctccgg cagccaggac accctccgcc caggcggcgt
     3721 acttcggcag cagctccact ttgatttccg cttttttgac cgtggactga acgcccttga
     3781 gacggcggcg gtcttccgcc agttgcagca gcatcaggtc atagcccgat gcgtggcgaa
     3841 cactgccacc ctcacggacg gcctgttcag cctgaacgcg caggcgatgc tgccgtgcgg
     3901 gactcaggct catggattac gctccggttt cggctgcggc ggcgctgaaa tcactaatct
     3961 ggatgttttc caccagtgcg gcgcagcggt agtcctcaac cacataggct tcgttaacgg
     4021 attcaaagtt ttcaatccgg tcacgtttcg ggttgtcgat aactgaacgg cggcgggtgt
     4081 cttcctgcca gtagatggac aggttatcca gacgggtgat cagcagcgca ttcggcggga
     4141 agaacggcgc acgcacggcc tgcaggccac ccatgcgttt ctgactgatg atcatatcgg
     4201 cagccagttt ttcactgttt tcctgctctt tgttgaccag cgggaaatac ttgtcagaca
     4261 gcagttcacg accgcaaatc accaccagat cgtcatcgtc ctggtagacc acgtcgataa
     4321 gctcattgac ggcatccatc accacggcgt ccaggttggc atattcgcca cctttcccga
     4381 ctttcactgc gcccggtgtg gtttcaccgc ccgtggtggt gctgcccatg acgtgatccg
     4441 gtgcatcctc acggattttc tgcagccagc ctttattcac atcctgcagc agcgggtttt
     4501 cgctacggtt ggaggttttc gcacgcttca cgccattaaa gccgatcatg atgcggtcca
     4561 gtgcctgacg tttcacgatg gcgtcacgga tacgcacctg aaaatcctga aacttcgccc
     4621 acaggtccag cttcgcgtag gtcagcaccg tgtcaaagtt ggtctgctcg catttatatt
     4681 ccacatcgac catcagcgtc ggatcgacag gttcacgctc tttcgcagtg gtatcagtgg
     4741 ttccggcaat ggtgctgcca actcccaacc ccagcagctg accggactgc tcagtcactg
     4801 gcgtgacgtt aatcagagtc aggaaagcgg cggactgctg gatctggtct tccagcgtct
     4861 gctgcacgga cggctctacg gtgaacttgc tggacagttc ttcaactgcc acaccgttca
     4921 gacgcgccag ttgctgcagg taagcgttaa aagcaaagcg ggtattcttc ttcatcaggt
     4981 tttgtgctcc atcagcaatt ggtcagagtg tcagcggggg cgttaccgcc tgttgcacgc
     5041 tggcggtagt cctggcggct gtcttcatga ctcagcttgt ccaccagttc gttaaaggcg
     5101 gtttgctgtg cctgcagggc agtctccagc tcagacaggc gttcttcctg ctcagacagg
     5161 gatttttcgg tgcgtgcgct caggttctgc tgctcagtgg cgaccagctc cacggcctta
     5221 tgcacatcag agaaccgggc gtcatcggac tgctcttttt tggtaaacag cgccgtgacg
     5281 cgggcaaaca gggacggttt gtcgtcctgg acttcttcca gttcgatcac cgtttcctct
     5341 gcggcggtaa agagattggc gggattctgc ttgcggtttg ccagcgggtt atgggctgca
     5401 ctggcgctga atgtcagcat ttcagtgccc agactggcag ggtcatcagt ggcagccagg
     5461 ccgactaggt aggctttgcc cgtatcagcg aacttcgggc tgacttccat aaaggtgaat
     5521 aatttctggc cttttttcac cagttccacc agggactccg ttggctcaac gtcagcatac
     5581 agcgccatct tgcctgccag cggaccttcc gtgatttctt cagcaaacag cgccgtcacc
     5641 ttgccgtagc ggttaaaggt gctgtccggc agataagact tgatgtgctc aaggttaatc
     5701 agcgcggtat acaccgccgg gttatagctg gctgccatct gttccagcca ttcacgctgg
     5761 atttcgcgtc cgtcggtggt ggcaccttcc accccgatgc gaaaacgctt tgctttcact
     5821 gtcatgagcc gtgctccgtt agaaaaaact tactggagcc ttatggttgc ggtgataggg
     5881 gcagtgaaac aatgcgcggt atttgtaccg acaaccacac aaaccgcagg cggggaaagc
     5941 cttcattcaa ggctgtaggt ttgtgccatg aacaccacac tgacacccgc agatctcgat
     6001 ccccgtcggc aggccatgct gctgtacttt cagggatacc gcgtagcccg cattgctgaa
     6061 atgctgggcg agaaagttgc aaccgttcac agctggaaaa aacgcgacaa gtggggtgac
     6121 tatgggcctc tggatcagat gcagctcacc accgccgcac gctactgcca gctcatcatg
     6181 aaggagcaca aagaagggaa agatttcaaa gagattgacc tgctggcgcg ccagtctgag
     6241 cgccacgcgc ggatcggcaa gtttaacaat ggcggcaacg aagccgactt aaaccctaac
     6301 gtcgccaacc gcaacaaagg cccacgccgt cagcctgaaa agaatgtttt caccgatgac
     6361 cagattgaga agctggaaaa aattttccat tcctccatgt tcaactacca gcgccactgg
     6421 tgggaagccg gaaaaaccaa ccgcatccgc aacctgctga agtcacgcca gatcggcgcg
     6481 accttctatt ttgcccgtga agccctgatt gacgccctgc ttaccggacg taaccagatt
     6541 ttcctttctg ccagtaaggc acaggcccac gtcttcaaac agtacatcat cgactttgcc
     6601 aaagaagtgg aggtggagct gaaaggcgat ccgatggtgc ttcccaacgg ggccacactg
     6661 tatttcctcg gcaccaatgc ccgcactgcc cagagttatc acggtaacct gtatctggat
     6721 gaatatttct ggataccgaa atttcaggag ctacgcaaag tggcttccgg tatggctatt
     6781 cacaagaaat ggcggcagac ctatttttcc acaccatcca gtctgaccca cagtgcttat
     6841 ccgttctggt ccggtgcgct gttcaaccgt gggcgcaaca aagctgacaa ggtggacatc
     6901 gacctgtccc acagcaatct ggcccccggc cggctgtgcg cagacgggca ataccgccag
     6961 atagtcaccg tggaagatgc ggtgcgcggc gcctgtaacc tgttcgacct tgaccagttg
     7021 cgcatggagt acagccctga cgaataccag aacctgctga tgtgcgagtt cgtggacgat
     7081 ctcgcgtccg tgttcccgct cagcgaattg caggcgtgca tggtggacag ctgggaagtc
     7141 tggaccgact ttcatgcact ggccctgcgc ccgtttggct ggcgcgaagt gtggatcggt
     7201 tatgacccgg caaaaggtac gcagaacggc gacagcgccg gatgcgtggt ggtggcaccg
     7261 ccagccgtgc caggcggtaa gttccgcatt cttgagcgtc accagtggcg cggaatggac
     7321 tttcgcgccc aggctgacgc catcaaaaaa ctgactgaac agtacaacgt gacctatatc
     7381 ggcatcgact caaccggcgt tggtcacggg gtttacgaga acgtgaaagc gttttttcct
     7441 gccgtccggg agtttgtcta caaccccaac gttaaaaacg ccctggtact caaggcctac
     7501 gacattatca gccaccgccg tcttgagttt gacgccgggc acaccgacat tgcgcagtca
     7561 ttcatggcaa tccgtcgcgc caccaccgcc agcggcaacc gcccgaccta tgaagccagc
     7621 cgcagcgaag aagccagcca tgccgatctg gcctgggcaa caatgcacgc actgtttaac
     7681 gaaccgctgc agggcgagtc cgccaatacc agcaatattg tggagatttt ttgatgggaa
     7741 agagtaagaa gaaccgcgct gcggcgacga aacagaccca gcataaaaac cagacttcag
     7801 ccgaagcatt cagcttcggc gatcccgttc cggttctgga ccgccgtgaa ctactggact
     7861 atgtggaatg cgtacagaca gatcgctggt atgagccgcc agtgagtttt gacggactgg
     7921 cgcgcacctt ccgcgccgcc gtgcatcaca gttcaccaat tgcggtgaaa tgcaacattc
     7981 tgatcagtac ctacatccct cacccgctgc tcagccagca ggctttttca cgttttgtgc
     8041 aggattatct ggtatttggt aacgcttacc tggagaaacg cacaaaccgg ttcggagagg
     8101 tcatcgctct tgagcctgct ctggcaaaat acacccgacg cggattagac ctggatacct
     8161 actggtttgt gcaatacggc atgaccacgc agccgtatca gttcacgaaa ggaagcatct
     8221 ttcatctgat ggaaccggac atcaaccaag agatctacgg cctgccaggt tacctttctg
     8281 ccattccgtc agccctgctc aacgagtccg ccacgctgtt ccgccgatag tattacatta
     8341 acggcagtca tgcaggcttc atcatgtaca tgaccgatgc cgcgcaaaac caggaggatg
     8401 tgaacaacct ccgcaatgcg atgaaaagcg ccaaaggacc aggtaacttc cgcaatctgt
     8461 ttatgtactc gcctaacggc aaaaaggacg ggcttcagat catcccgttg tcagaagtcg
     8521 cggcgaagga tgagtttctg aacatcaaga acgtgagccg ggatgacatg atggcggcgc
     8581 atcgtgtgcc accgcaaatg atggggatta tacctaataa tgtcgggggg tttggggatg
     8641 tggagaaggc gagcctggag tttgtacgta acgagttaat accgttacaa aaaagaatga
     8701 tggaaataaa taaattggta agtgagaaca ttgttaaatt tgatagttat aaactagcta
     8761 cttaacgtaa tcactaaatg aggttcttta acacagctaa aaaatttatt aatagccagc
     8821 agtttttatg aatttcttca gcgtgcagat acacgctgaa gatgcaaaaa atcatatgag
     8881 acgaccgtct ggacttctgt tacctaaatg taattcacag agtatccacc taatcacatc
     8941 aggtcgaatt aacccagcta caaaaaccga attccaatta tttttacctt tatgtttttc
     9001 atccaacagc aacaactcgc gagtcaacaa ctcatataca tcgctataag tagaaagact
     9061 cttattcagt cctctaataa caagctcagg atataagtaa aacgactccc attgttcaga
     9121 caaatacccc ttaatattat tcttgataac aacattatca agatgatact taacattgtt
     9181 atattctggt gacattgggt caattatgat ttttacatca attgtaggtg ttcgccctaa
     9241 tttagaaaaa ttagcacata ttaatctttg ttttaatata ttatcaaaat atggatgcag
     9301 catccgatgg cctgcagaat tagctatagt agtacttttg aaagtattac atttgcaagc
     9361 aggaaccaaa ttcttagtga ataaagaaaa ttctggatag ttttccttgg gtaaaacatg
     9421 atccaaagtc ccgctatgca ttgaaccaca cattggacat agagagttag aattagctgc
     9481 tcttatatca tcaattatag ataaacactt tgcgggattg ttataataat atctcaaagc
     9541 ttcagcaata ttgttactca atacgccaca agaattgaca ttaagatacc ctttattctt
     9601 tatgtacgat ctatatgcat taagtataaa tgtatcctgt ccattcagaa cagaatgatg
     9661 ttttaatctc ttatttgcag atagtttttt aaatgcagaa taatctttaa aaacaggtct
     9721 ttttaattta ttcatttcaa ttgcccattt catttctcaa cgcagttaat acattaagtg
     9781 ataagtcctc gctatattta gattcaacat catcccaaga catattcttt gcaattatat
     9841 tgttttttac tttatttaaa atttgagttg gttcactctc accgaaaaca aaatatgaga
     9901 tatttcctat attcgcccca aaagtactca atctcggttt ttcgctaaca attaccccat
     9961 catctcgtct tctgagtatt gtcacttgct ccttaaaaac ctcccgaaca agataaaccg
    10021 aatgcgttgc tatgatagct gaagagcctg tcttttctaa taaattatca agcaatgcca
    10081 taaatttatt aataaatgaa ggatggagat gtgtttctgg ctcatctatt aatagaagag
    10141 tcccattctc aatatacaaa cagacttgta cacaaaactt aataaacgat atttccccac
    10201 tactcaaagg gtaacattta ttttcaataa gcctcaaagg ctcgccagag agaataattt
    10261 cagaatataa tgatagtcta gattcttcgc ctcgagaatt aagctcattt aatttaacaa
    10321 atggtgaatt ttcaccgcca catttgatta ctaaatcgtt gttactattt agaacactca
    10381 gtgcatcaac aaatatattc cacctttgat tatagccgat agcgtcgtta ctcctcgcta
    10441 gttgcactat taaatcattc aagtttaatt tggattttga ttcacgattt aaagtcaatc
    10501 ttttgtacca tatcaatgat tttattcttt tatcggttgg aaatgaacac ttactttcat
    10561 ttgttggaga aaaagcaatg agcctactaa tttgaattcg ttcttcaatg ctcacaccgt
    10621 tagaatcaac tacagccacc aaattatcct ttcctttaat cgcagccaat gcgatttctc
    10681 taagcgtttg gctttttcct acaccattct cgcctataat tatggaaatt ctttttggta
    10741 aatcatgctc gtgatcaaaa ttaaaaacat aagatacatc ttcttcatta actttattcg
    10801 aatagctaat cttgatgtgc tgtgataaat tacccaactc ctcatattga ataccggaaa
    10861 gaactgttcc tgcatttttg aaagtaaaat acgactcaga ctctctaatg aaagatttat
    10921 taaagatatc agaagagatt gcttttttcc tcgaattctc tgcactagcg tcacttttct
    10981 tagaaacaac atcattaatg aaatttaata tatatttgga ttcattcacc ccaaaaaatc
    11041 ttactagtct tcgataatta ttcatatcct gaagcatgac aaaataatca ttaaacccct
    11101 catcctttaa attagattct tcctttttct tcactcgcct tatcagttct gcttttccat
    11161 ttcgttcctc ctctgaattc aaaaaaccaa tataaccatt cagtgaaatt atatccttac
    11221 actctttttt attaaaaata gatatttcga ctctactcaa atatccaaaa tcattccaat
    11281 cgcttcttga tgggactatt tttatataat taccagaatc agatatctgt tgattatttg
    11341 taattaaaaa atataaacta taatttttat ttttcttgac taacattatt accctctcac
    11401 ttcattagtg atgatttatt ttggaattat tttacacact tatacctagc gcgcaatcgt
    11461 atccccgcca cgcctgcccg ctttatgtag aggttttcat gcacctgcat gatctacgca
    11521 aaagcccgcc agttctggcg ggccttagca aaaacgatcc tcaaacgatc atgcgatctc
    11581 atgcggcata gacatgcact acagagctaa cgcctcgcaa gggctcgttg ttcaaccttg
    11641 ctgacgccag aagctagttc agacgccagc aacgtttctt aatgcagcca gctgtcgtct
    11701 tcccacacct tctgcataat tttcatcact tgttttcttt cttcgtccag ttgcaatcca
    11761 gtaagttcca caccgttaga gctacctttg cggatacgaa ttaccgtttt gggatacaga
    11821 gggcgcagat tgcggtaaag ctcggattca agagcgtcca gggtagactg gctaatcttc
    11881 tgctctttat cgatcattat ttcaatgcgc ataaaagtca cctcagctga tgacatccat
    11941 tgagcggttg tattcgtggg ttctgatttt tgccatgagt tcatcagtca attcagaaac
    12001 ccactgcaga gccagcccct tctcttcatc actacactca ctagccgcta caagcttaag
    12061 aaaaaaatca atgcgctgga gcttcaaaga ctccaaaaaa tagtcctgca tctttcctcc
    12121 tatgacacca cacgcaatac tgtatgcata accactgttt atatttacag tatataataa
    12181 tcttactgat gtaaaacgtt tttttacgtt catcagcctg atatgcctgg tattattaag
    12241 agcacgaatt gttaacccgc gtaattaata caggttccgc cactgatcat cttcctgcaa
    12301 acgctggttc cgatagaaga tacgcaggcc tgctcctgac ggaatactgc ctccgcgaag
    12361 gagtaaatcg acctctttct cgctgccatc aaatcctctg gacttcagct catacacgag
    12421 ctgcagtcgc tgatggtctg taattcgctg tttgtagtct ttacgccgtt tcggtttcac
    12481 caggcgtaac cttgctgcca gttcccggcg ctcttttttg ctcatactgt gcaggtaatc
    12541 gtgcaactcc ttgtcatcca tgctggtaat gtccgttctg gggttcccat cagctgattt
    12601 atctttctcc tgttggttca aattttcagc aaggagacag ttattgccac gagtccaagg
    12661 ggcgcaagcg ccctggtcgg ctgccgcctc ctgaacgtca acggctttac gaaccatttt
    12721 ccacttcact gcatgagtgc agatcttgcc ttctgcaatg ggtgaccaga tgccataaat
    12781 acgaatacag tgatcgccat aggcggtcgg ctcttcattg atttcataag cggttctgat
    12841 caagtgatat ttgcgaggaa ccagcacgcc gccctgcctc ataatgtagg tggcaaaaca
    12901 gccagcatca gcagcagcca ggatggcatc aaggcgcggg ttatccagta ccggcgcacc
    12961 tgcttttttg tcaccctgct gccttgccgc ctgaccagcc aacaaccgca gttcacggta
    13021 agcctgacgc cctggaatac caaagaagcg gaattgctga acacgatgca gagacgccca
    13081 gggattaacg tattcagcgt tatcacgcag ggatttaccc gtttccttgc tgatctcgcc
    13141 agccagacca cgcccgtcaa tgttcttact gatgtatttc gcgatgtagc ttgtcggcgt
    13201 tcctttgcgc gggtttatca gctcagattt aaagcgtgga ccagtgttat tacccagttc
    13261 ctcgcggtct tcacggatgg caaacttacg caacaatgca gtaatggcgc ggcggtcttt
    13321 tttgcgcata aaacacaaca ggtgccagtg aactgtaccg tcatgatgcg gctcagccac
    13381 ccgcacgcca taccagcgca acccggcttt gtgcatcgcc ttacgaaatg cagcaaacat
    13441 gccgaccaga taatcgctgc tttgtcttac cgtcgcattt gtccaggttg ggtttggtct
    13501 gccgttattg agcgtggaat ggaaacgtga cggacaggta atggtgtaga aaacggcgca
    13561 gtcaccgcgc atttccgcga taagctccag acctttaaca caggccatca tctcattgcg
    13621 gcggtgcgcc gggttgctgc tgctggcgtt taccacgtct tccatatcca gcgtgtcgcc
    13681 ctcttcgttc accagttcat gagaacggaa aaactccaat gacttgcggc gctgctcacg
    13741 tttatgcatc acggcttcat agctgacata gggagatgct tttttgctga ccaggcagac
    13801 agcacgcaac tgctcttccc gccattcgca acgcattttc cataatttcc ggtaccacca
    13861 gtcggcgcac aacatacgcg ccagcgaacc cggaatgagt tcatagggca cgggtttacg
    13921 gcggtttctt ttccgacgga gttgctcaaa cgcaggcggg atgacatcca gacgcagggt
    13981 ttccgctgcc accttttccc atgtcttgcg gatttcttct ggcttaacgt catcggtggc
    14041 atacaaatca ccacaagctg catcaaggca catgctcata tgcgcagcga caagggtaga
    14101 caggcgtttc acctgatcct gactcatttc aggcagaatc agcaggccgt ccagccctac
    14161 atggcttgcc ataaaacgaa aagatgcaga tagctggctg tcgcgtacat gctccagtcg
    14221 ttccagacat ggcttaatcg tctcacgtaa atagcgggaa taagcctttg gcctgcccag
    14281 gctgctgaag tattcaatac gttgcatcag cggcttgctg atatgggaag gctgggcgtt
    14341 gacgtccgcc agaatgacca tatccggatt aaaacgctgc tgctcatgcg ccagctttgc
    14401 ccggctaatg agcttatcct gctccatttc gtgctggaca ggatcacgtg attcataaaa
    14461 aaaataacgc tcccagacct gatcactcag tgcctcgcgg cgcaactgtt cctgctcgtt
    14521 atcggcagcg tacagagtga tcaggtttga aagcgcagaa accggcgcaa cttccgccgg
    14581 gtccagataa gggttaatgg cctttttcgg gctgttccat gagaacgctg cggcagcctc
    14641 gttaaagccg cagcagttgt tcatatcggc atggctcatg cacgtactcc gtacacggca
    14701 gaactatcca cgccacgcga ataatcaaat cccacccagc agcgcggccc ggaaacagca
    14761 atgatttctg ttgctgattt accctcgcca gctgccacac cgatgctgcg ttttaccttg
    14821 atatagtggt gagtaaaatt gcgatacagc gaacggatca gggatgtgtc actgttagaa
    14881 acaatgaccg gatgtccttc tgatgaccga tgttcaagaa cggatgctag gtgatactgg
    14941 tcatcttcag tgaaaccatc agtgtgatag ccggaaaacg taccgtcata cggtggatcg
    15001 caatacacca catcccccgc cttcaacatc gccagcgttt catcaaagct ggcgcagata
    15061 aacgttgctc gctgggcttt ttctgcaaat gcgcgaattt ctttttcagg gaaatacgga
    15121 tttttataat tgccgtaggg aatgttgaaa tgcccgctct tgttatagcg acataaacca
    15181 cggtaaccgt gacgattgag atacaggaaa tataccgctt tcatgaaatc agtaatttca
    15241 gttgagtaat taaactcctg ccttatgttg taataagcca cctccctgtt tgcgatctca
    15301 aataaaactc tgg
//
LOCUS       DADMJE010000098        15141 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.099, whole genome shotgun sequence.
ACCESSION   DADMJE010000098 DADMJE010000000
VERSION     DADMJE010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 15141)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15141)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15141
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.099"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..421
                     /locus_tag="JN001_002668"
     CDS             <1..421
                     /locus_tag="JN001_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY9053851.1"
                     /translation="LMNNSDARKTSALLFLDGDNFKYINDTWGHATGDRVLIEIAKRL
                     AEFGGLRHKAYRLGGDEFAMVLYDVQSESEVQQICSALTQIFNLPFDLHNGHQTTMTL
                     SIGYAMTIEHASAEKLQELADHNMYQAKHQRAEKLVR"
     gene            437..919
                     /locus_tag="JN001_002669"
     CDS             437..919
                     /locus_tag="JN001_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family protein"
                     /protein_id="HAY9053852.1"
                     /translation="MIKHLVAPLIFTSLILTGCQSPQGKFTPEQVAAMQSYGFTESAG
                     DWSLGLSDAILFAKNDYKLLPESQQQIQTMAAKLASTGLTHARMDGHTDNYGEDSYNE
                     GLSLKRANVVADAWAIGGQIPRSNLTTQGLGKKYPIASNKTAQGRAENRRVAVVITTP
                     "
     gene            complement(996..1343)
                     /gene="rplS"
                     /locus_tag="JN001_002670"
     CDS             complement(996..1343)
                     /gene="rplS"
                     /locus_tag="JN001_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012768745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HAY9053853.1"
                     /translation="MSNIIKQLEQEQMKQDVPSFRPGDTVEVKVWVVEGSKKRLQAFE
                     GVVIAIRNRGLHSAFTVRKISNGEGVERVFQTHSPVVDSISVKRRGAVRKAKLYYLRE
                     RTGKAARIKERLN"
     gene            complement(1385..2152)
                     /gene="trmD"
                     /locus_tag="JN001_002671"
     CDS             complement(1385..2152)
                     /gene="trmD"
                     /locus_tag="JN001_002671"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HAY9053854.1"
                     /translation="MWIGIISLFPEMFRAITDYGVTGRAVKNGLLSIQSWSPRDFTHD
                     RHRTVDDRPYGGGPGMLMMVQPLRDAIHAAKAAAGEGAKVIYLSPQGRKLDQAGVSEL
                     ATNQKLILVCGRYEGIDERVIQTEIDEEWSIGDYVLSGGELPAMTLIDSVSRFIPGVL
                     GHEASATEDSFAEGLLDCPHYTRPEVLEGMEVPPVLLSGNHAEIRRWRLKQSLGRTWL
                     RRPELLENLALTEEQARLLAEFKTEHAQQQHKHDGMA"
     gene            complement(2183..2731)
                     /gene="rimM"
                     /locus_tag="JN001_002672"
     CDS             complement(2183..2731)
                     /gene="rimM"
                     /locus_tag="JN001_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000043333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HAY9053855.1"
                     /translation="MSKQLTAQAPVDPIVLGKMGSSYGIRGWLRVFSSTEDAESIFDY
                     QPWFIQKAGQWQQVQLESWKHHNQDMIIKLKGVDDRDAANLLTNCEIVVDSSQLPQLE
                     EGDYYWKDLMGCQVVTTEGYDLGKVVDMMETGSNDVLVIKANLKDAFGIKERLVPFLD
                     GQVIKKVDLTTRSIEVDWDPGF"
     gene            complement(2750..2998)
                     /gene="rpsP"
                     /locus_tag="JN001_002673"
     CDS             complement(2750..2998)
                     /gene="rpsP"
                     /locus_tag="JN001_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HAY9053856.1"
                     /translation="MVTIRLARHGAKKRPFYQVVVADSRNARNGRFIERVGFFNPIAS
                     EKEEGTRLDLDRIAHWVGQGATISDRVAALIKEVNKAA"
     gene            complement(3135..4496)
                     /gene="ffh"
                     /locus_tag="JN001_002674"
     CDS             complement(3135..4496)
                     /gene="ffh"
                     /locus_tag="JN001_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HAY9053857.1"
                     /translation="MFDNLTDRLSRTLRNISGRGRLTEDNVKDTLREVRMALLEADVA
                     LPVVREFINRVKEKAVGHEVNKSLTPGQEFVKIVRNELVAAMGEENQTLNLAAQPPAV
                     VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFF
                     PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETL
                     FVVDAMTGQDAANTAKAFNEALPLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVG
                     EKTEALEPFHPDRIASRILGMGDVLSLIEDIESKVDRAQAEKLASKLKKGDGFDLNDF
                     LEQLRQMKNMGGMASLMGKLPGMGQIPDNVKSQMDDKVLVRMEAIINSMTMKERAKPE
                     IIKGSRKRRIAAGCGMQVQDVNRLLKQFDDMQRMMKKMKKGGMAKMMRSMKGMMPPGF
                     PGR"
     gene            4588..5454
                     /locus_tag="JN001_002675"
     CDS             4588..5454
                     /locus_tag="JN001_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311501.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inner membrane protein YpjD"
                     /protein_id="HAY9053858.1"
                     /translation="MQRLEQRSPDAILLLFLIAQTVDITMPVFALLALVAYSVSLALI
                     VPGLLQKNGGWRRMAIISAVIALVCHAIALEARILPDGDSGQNLSLLNVGSLVSLMIC
                     TVMTIVASRNRGWLLLPIVYAFALINLALATFMPNEYITHLEATPGMLVHIGLSLFSY
                     ATLIIAALYALQLAWIDYQLKNKKLAFNQEMPPLMSIERKMFHITQIGVVLLTLTLCT
                     GLFYMHNLFSMENIDKAVLSIVAWFVYIVLLWGHYHEGWRGRRVVWFNVAGAVILTLA
                     YFGSRIVQQLIS"
     gene            5475..6761
                     /locus_tag="JN001_002676"
     CDS             5475..6761
                     /locus_tag="JN001_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026171.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HAY9053859.1"
                     /translation="MEHISTTTLIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQ
                     GNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLT
                     FVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIK
                     TDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGID
                     INDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKETMLRAA
                     DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMS
                     PTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGT
                     RVRIGEYDIDILDVQDNMIKQVKVFPVKPLRESVAE"
     gene            complement(6816..7409)
                     /gene="grpE"
                     /locus_tag="JN001_002677"
     CDS             complement(6816..7409)
                     /gene="grpE"
                     /locus_tag="JN001_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HAY9053860.1"
                     /translation="MSSKEQKTPEGQAPEEIIMDQHEEIEAVEPEASAEQVDPRDEKI
                     ANLEAQLAEAQTRERDGILRVKAEMENLRRRTELDIEKAHKFALEKFINELLPVIDSL
                     DRALEVADKANPDMSAMVEGIELTLKSMLDVVRKFGVEVIAETNVPLDPNVHQAIAMV
                     ESDDVAPGNVLGIMQKGYTLNGRTIRAAMVTVAKAKA"
     gene            7532..8410
                     /gene="nadK"
                     /locus_tag="JN001_002678"
     CDS             7532..8410
                     /gene="nadK"
                     /locus_tag="JN001_002678"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020239499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(+) kinase"
                     /protein_id="HAY9053861.1"
                     /translation="MNNHFKCIGIVGHPRHPTALTTHEMLYRWLCKKGYEVIVEQQIA
                     HELQLKNVKTGTLAEIGQLADLAVVVGGDGNMLGAARTLARYDIKVIGINRGNLGFLT
                     DLDPDNAQQQLADVLEGHYISEKRFLLEAQVCQQDCQKRISTAINEVVLHPGKVAHMI
                     EFEVYIDEIFAFSQRSDGLIISTPTGSTAYSLSAGGPILTPSLDAITLVPMFPHTLSA
                     RPLVINSSSTIRLRFSHRRNDLEISCDSQIALPIQEGEDVLIRRCDYHLNLIHPKDYS
                     YFNTLSTKLGWSKKLF"
     gene            8496..10157
                     /gene="recN"
                     /locus_tag="JN001_002679"
     CDS             8496..10157
                     /gene="recN"
                     /locus_tag="JN001_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HAY9053862.1"
                     /translation="MLAQLTISNFAIVRELEIDFHSGMTVITGETGAGKSIAIDALGL
                     CLGGRAEADMVRTGAARADLCARFSLKDTPAALRWLEENQLEDGHECLLRRVISSDGR
                     SRGFINGTAVPLSQLRELGQLLIQIHGQHAHQLLTKPEHQKFLLDGYANETSLLQEMT
                     ARYQLWHQSCRDLAHHQQLSQERAARAELLQYQLKELNEFNPQPGEFEQIDEEYKRLA
                     NSGQLLTTSQNALALMAYGEDANLQSQLYTAKQLVSELIGMDSKLSGVLDMLEEATIQ
                     IAEASDELRHYCDRLDLDPNRLFELEQRISKQISLARKHHVSPEALPQYYQSLLEEQQ
                     QLDDQADSQETLALAVTKHHQQALEIARALHQQRQQYAEELAQLITDSMHALSMPHGQ
                     FTIDVKFDEHHLGADGADRIEFRVTTNPGQPMQPIAKVASGGELSRIALATQVITARK
                     METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGHQHYFVSKE
                     TDGAMTETHMQSLNKKARLQELARLLGGSEVTRNTLANAKELLAA"
     gene            10306..10647
                     /gene="bamE"
                     /locus_tag="JN001_002680"
     CDS             10306..10647
                     /gene="bamE"
                     /locus_tag="JN001_002680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417107.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HAY9053863.1"
                     /translation="MRCKTLTAAAAVLLMLTAGCSTLERVVYRPDINQGNYLTANDVS
                     KIRVGMTQQQVAYALGTPLMSDPFGTNTWFYVFRQQPGHEGVTQQTLTLTFNSSGVLT
                     NIDNKPALSGN"
     gene            complement(10709..10999)
                     /locus_tag="JN001_002681"
     CDS             complement(10709..10999)
                     /locus_tag="JN001_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417108.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RnfH family protein"
                     /protein_id="HAY9053864.1"
                     /translation="MPGKIAVEVAYALPEKQYLQRVTLQEGATVEEAIRASGLLELRT
                     DIDLTKNKVGIYSRPAKLSDSVHDGDRVEIYRPLIADPKELRRQRAEKSANK"
     gene            complement(10989..11465)
                     /gene="ratA"
                     /locus_tag="JN001_002682"
     CDS             complement(10989..11465)
                     /gene="ratA"
                     /locus_tag="JN001_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin RatA"
                     /protein_id="HAY9053865.1"
                     /translation="MILFVGFLLMEIVMPQISRTALVPYSAEQMYQLVNDVQSYPQFL
                     PGCTGSRILESTPGQMTAAVDVSKAGISKTFTTRNQLTSNQSILMNLVDGPFKKLIGG
                     WKFTPLSQEACRIEFHLDFEFTNKLIELAFGRVFKELASNMVQAFTVRAKEVYSAR"
     gene            11597..12079
                     /gene="smpB"
                     /locus_tag="JN001_002683"
     CDS             11597..12079
                     /gene="smpB"
                     /locus_tag="JN001_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HAY9053866.1"
                     /translation="MTKKKAHKPGSATIALNKRARHEYFIEEEFEAGLALQGWEVKSL
                     RAGKANISDSYVLLRDGEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYG
                     RVNREGYTVVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
                     "
     gene            12294..12656
                     /gene="ssrA"
                     /locus_tag="JN001_002684"
     tmRNA           12294..12656
                     /gene="ssrA"
                     /locus_tag="JN001_002684"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
     gene            complement(12817..15141)
                     /locus_tag="JN001_002685"
                     /pseudo
     CDS             complement(12817..15141)
                     /locus_tag="JN001_002685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311542.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         3710 a         4065 c         3549 g         3817 t
ORIGIN      
        1 gttgatgaac aattccgatg cccgaaaaac gtcggcgtta ctatttcttg atggcgataa
       61 tttcaaatat atcaatgata cctggggtca tgcgacgggc gatagggtct tgattgaaat
      121 cgcaaaacgg ttagctgaat ttggcgggct gcgacataaa gcataccgcc tgggcggcga
      181 tgaattcgct atggtgctct atgatgtaca gtcggaatct gaagtgcaac agatatgctc
      241 agcactgaca caaatcttta atctcccgtt tgatcttcat aatggccatc agaccaccat
      301 gacattaagc attggttacg cgatgaccat tgagcacgcc tctgcggaaa aattacaaga
      361 gcttgccgat cacaatatgt atcaggccaa acaccagcgt gccgaaaagc tggtgagata
      421 acaaggatat atcgatatga taaagcacct ggtagccccc ctgattttca cctcactaat
      481 actgactggc tgccagtccc ctcagggaaa gtttactcct gagcaagtcg ccgctatgca
      541 atcttatgga tttactgaat ccgccggcga ctggtcgctg ggcttatcag atgccattct
      601 gttcgcaaaa aatgactaca aattgctccc ggaaagccag caacagatcc aaaccatggc
      661 agccaaattg gcctcgacag ggctaacaca tgcccgtatg gatggacaca ccgataacta
      721 tggtgaagac agttacaacg aaggcttatc attgaaacgg gcgaatgtcg tggccgatgc
      781 atgggctatt ggtggacaaa ttccacgcag caatctcacc acacagggtt taggaaaaaa
      841 atatcccata gccagtaaca agaccgccca gggccgcgcc gagaaccgcc gcgtcgcagt
      901 ggtgattaca accccttaaa acacgagcaa acagacaaaa aaagggccag ccaattggcc
      961 agcccttctt aacaggatgt cgcttaagcg aaatcttagt taagacgctc tttgatacga
     1021 gcagccttac cagtacgctc acgcaggtag tacagtttag ctttacgaac agcaccacga
     1081 cgtttgacag aaatgctgtc aactaccgga gagtgagtct ggaagacacg ctcaacgcct
     1141 tcgccgttgg aaattttacg aacagtgaat gcagagtgca gaccgcggtt acgaatagcg
     1201 ataaccacgc cctcgaatgc ctgcagacgt tttttggaac cttcaacaac ccatactttc
     1261 acttccacgg tatcacccgg acggaaggaa ggtacgtcct gcttcatctg ctcttgttca
     1321 agttgcttaa taatgttgct cataatttaa tctcttatcc tgggtaaact gatatctcgg
     1381 gggcttacgc catcccatca tgtttatgtt gctgttgtgc gtgttccgtt ttgaactccg
     1441 ccagcaacct tgcttgctct tcagtcagag ccaggttttc cagaagttca ggtcttctaa
     1501 gccaggtacg gcccagcgac tgtttcaaac gccagcgacg tatctcggca tggttgcccg
     1561 acagtaacac tggcggaact tccatccctt ctaacacctc aggccgcgta tagtgcgggc
     1621 aatccagcaa tccttcagca aaggaatctt ccgttgccga ggcttcatgt cccagtaccc
     1681 ccggaataaa ccgggaaacg gagtcaatca gcgtcattgc tggtaactca ccaccactga
     1741 gaacgtaatc gccgattgac cattcttcgt caatttcggt ttggatcacg cgctcatcta
     1801 taccttcgta gcgaccgcac accagaatca atttttgatt cgttgccaat tcgctgacgc
     1861 ccgcttgatc aagcttgcgt ccctgtggtg acagataaat cacctttgcg ccttcacccg
     1921 ccgcggcttt tgctgcatga atggcgtccc gcaagggttg caccatcatt aacatccccg
     1981 gtccgccgcc gtaaggacga tcgtccacgg tacggtgccg gtcatgcgtg aagtcgcgag
     2041 gactccagct ctggatgctc agcaggccat ttttaactgc ccggccagtt accccgtaat
     2101 cggtaattgc gcggaacatt tcaggaaaca ggctaattat gccaatccac atagcgccgt
     2161 cttttaccgt ttatccggtg gtttaaaaac caggatccca atctacttcg attgaacgag
     2221 tagtgagatc gactttcttg ataacctgcc catcgaggaa cggtacgaga cgttccttga
     2281 taccaaacgc atctttcagg tttgccttaa tgacgagaac gtcattagat ccggtttcca
     2341 tcatatcgac gactttaccg agatcgtagc cttcagtggt tactacctgg cagcccatca
     2401 ggtctttcca gtagtagtca ccctcttcaa gctgaggcaa ctgcgatgaa tccacgacaa
     2461 tttcacaatt cgtcagcagg ttcgccgcat cacgatcgtc aacgcctttc agcttgatga
     2521 tcatgtcctg attgtggtgc ttccagcttt ccagctggac ttgctgccac tgacccgcct
     2581 tctggataaa ccagggctga tagtcaaaaa tgctttcggc gtcttcggtg gaagaaaaca
     2641 ctctgagcca cccacgaata ccgtaagacg aacccatttt tcccaaaacg atgggatcaa
     2701 caggtgcttg cgcggtgagt tgtttgctca tcatgaccac cgtgacagat taagctgctt
     2761 tgtttacttc tttgatcagc gcagcaacgc gatcagaaat agttgcgccc tggccaaccc
     2821 agtgagcgat gcgatccaga tccaggcgag tgccttcttc tttttcgcta gcgattgggt
     2881 tgaagaaacc aacgcgctcg atgaagcgac cgttgcgtgc attacggctg tcagcgacaa
     2941 caacctggta gaacggacgc tttttagcgc cgtgacgtgc taaacgaata gttaccataa
     3001 catcctcttg tgtgaataaa acaaccggac cccatcgagg aacggagtcc ggtgtcatat
     3061 taaaagcccg aaaattttac tgatttctgg agaaaatgca atcagcagtt aataactctg
     3121 tcgcataagg tcatttagcg accaggaaat cccggcggca tcatcccctt catgcttctc
     3181 atcatcttcg ccattccgcc cttcttcatt ttcttcatca tgcgctgcat gtcgtcgaac
     3241 tgtttcagaa gacggttaac gtcctgcacc tgcataccgc aaccggcagc aatacggcgt
     3301 ttacgcgaac ctttgatgat ttctggctta gcgcgctctt tcatcgtcat cgagttgatg
     3361 atggcttcca tacgcaccag cactttatcg tccatctgtg acttgacgtt atccgggatc
     3421 tgccccatgc ccggcagctt gcccatcagg ctggccatgc cgcccatatt tttcatctgg
     3481 cgcagctgct caagaaagtc gttgagatcg aagccgtcac cttttttcag cttgctggct
     3541 aatttctctg cctgcgcgcg gtcaactttg ctttcgatat cttcgatcag cgacagtacg
     3601 tcgcccatgc cgagaatacg cgacgcgatg cggtccggat ggaacggctc cagcgcctca
     3661 gttttctcgc caacaccgag gaacttgatc ggtttgccag tgatgtgacg aatagagagc
     3721 gccgcaccgc cgcgggcatc gccgtccact ttggtcaaca ctacgccggt aagcggtaac
     3781 gcttcattga atgcttttgc cgtattggcc gcatcctgac cggtcatggc gtcaaccaca
     3841 aacagggttt caaccgggtt aatcgacgca tggacttgtt tgatctcgtc catcatcgct
     3901 tcgtcaacgt gcagacgacc agcggtatcc accagcagca cgtcgtagaa tttcagtttg
     3961 gcttctttca gcgccgcgtt aacgatatct accggcttct gaccaacatc agaagggaag
     4021 aaatcaacgc ccacctgctc tgccagcgtc tcaagctgtt tgattgccgc cgggcgataa
     4081 acgtcggcag aaaccaccag cactttcttc ttgtgcttct cgcgcaggaa cttaccgagt
     4141 ttaccaacgc tggttgtttt accggcacct tgcaggcccg ccatcagcac gaccgcaggc
     4201 ggttgcgccg ccaggttcag ggtctggttc tcttcgccca tcgccgcaac cagttcgtta
     4261 cggacgattt tgacgaactc ctgccccggc gtcaggctct tattaacttc atgaccaacc
     4321 gctttctctt ttacgcgatt gataaactca cgcactaccg gcagagcgac atccgcctcc
     4381 agcagcgcca tgcgcacttc gcgcagcgta tcttttacgt tgtcttcagt taggcgtcca
     4441 cggccactga tattgcgcag cgtgcgcgac aaacgatcgg ttaaattatc aaacattgtc
     4501 tctcgcctgg ggtggaaacg gttggccgca atcgcgacac atcatcagta ttttgccgca
     4561 gtataacatg aaggcgtctt tgttgttatg caacggttgg agcagcgttc acctgacgct
     4621 atactgcttc tctttcttat tgctcaaact gttgacatca ctatgcccgt ttttgctctg
     4681 ctcgcgcttg tcgcctactc cgtcagtctt gcgctgattg ttcccggtct gctgcaaaaa
     4741 aacggcggct ggcggcgcat ggctattatt tctgcggtca ttgcgctggt ctgccacgca
     4801 atcgctctgg aagcccgcat cctgcccgac ggtgatagcg gacaaaacct cagcctgctg
     4861 aacgttggtt cattggtcag tttgatgatc tgtacggtaa tgaccattgt ggcttctcgc
     4921 aatcgtggct ggttgctgct acccattgtc tatgcctttg cgcttatcaa cctggcgctg
     4981 gcgaccttca tgcccaatga atacatcacc catctggaag caacgcctgg gatgctggtg
     5041 cacattggct tatcgctctt ttcctatgcc acgctaatta tcgccgccct gtacgcgctg
     5101 caactggcgt ggattgatta ccaactgaag aacaagaagc tggcatttaa ccaggaaatg
     5161 ccgccattga tgagtatcga gcgtaaaatg ttccacatca cgcagattgg cgtggtgctg
     5221 ctaacgctca cgctttgcac tggcctgttc tacatgcaca acctatttag catggaaaat
     5281 atcgacaagg ctgtgctctc tatcgtggcg tggtttgtct atattgtgct gctgtgggga
     5341 cattaccatg aaggatggcg tggacgccgc gtcgtctggt ttaacgttgc gggcgcggta
     5401 attctgacac tggcctactt cggcagccga attgtccagc agttaatcag ctaaacccag
     5461 aaaaggagtt tcccctggaa cacatttcta ctactacgtt gatcattatt ctgatcatca
     5521 tggtggtcat ttcagcctat ttttccgggt ccgaaaccgg aatgatgacc ctcaaccgct
     5581 atcgtctgcg acatatggcg aaacagggta atcgctcggc caaacgcgtc gaaaaattgc
     5641 tgcgtaagcc agaccgcctg ataagcctgg tgttaatcgg caataacctg gtcaatattc
     5701 ttgcctccgc gctcggcact attgttggga tgcgtttgta cggcgatgcg ggcgtggcaa
     5761 ttgcgactgg tgtgctgact tttgtcgtac tggtatttgc tgaggtattg ccgaaaacca
     5821 ttgccgcgct gtacccggaa aaagtcgctt atccgagtag ttttctgctg gctccgctgc
     5881 aaattttgat gatgccgctg gtctggttgc tgaatgctat cacccgtatg ctgatgcgca
     5941 tgatgggtat caaaaccgat atcgtggtta gcggctcttt gagcaaagaa gagttgcgca
     6001 ctatcgtgca cgaatcacgc tcacaaattt cccgtcgcaa tcaggatatg ctgctgtcgg
     6061 tgctcgatct ggaaaaaatg accgttgatg acatcatggt gccgcgcagt gaaattatcg
     6121 gtattgatat caacgatgac tggaaatcga ttctgcgcca actctcccac tcacctcacg
     6181 ggcgcatcgt gctctaccgt gattcgctgg acgacgccat cagtatgctg cgagtacgtg
     6241 aagcctggcg attgatgtcg gagaaaaaag agttcaccaa agaaaccatg ctgcgcgccg
     6301 cggacgagat ctattttgtg ccggaaggta cgccgctcag cacgcagttg gtaaagtttc
     6361 agcgcaacaa aaagaaagtc ggcctggtcg tcaacgagta tggagacatt caggggctgg
     6421 tgacggttga agatattctg gaagagattg tcggcgattt cactacgtcg atgtcgccaa
     6481 cacttgccga agaggtcacg ccgcaaaacg acggttcggt gattatcgat ggcaccgcca
     6541 acgtgcggga aatcaacaaa gcctttaact ggcatctacc ggaagatgat gcccgcacgg
     6601 ttaatggcgt cattcttgag gcactggaag agatccctgt cgcaggcacc cgcgtgcgta
     6661 ttggcgagta cgatatagat attctcgacg tacaggacaa tatgattaag caggtaaaag
     6721 tttttcctgt gaaaccgctg cgcgagagtg tggcggagta acgaaaacgg ccctgcattc
     6781 gcatgcaggg ccgtgaatta ttacgaaaac agaaattacg cttttgcttt cgctacagtt
     6841 accatcgccg cacgaatcgt acgaccattc agcgtataac ccttctgcat aatgcccagt
     6901 acgttacctg gcgcaacgtc atcagattcc accattgcga tagcctgatg cacattcggg
     6961 tccagcggca cgttagtttc ggcgatcact tcaacaccaa acttacgcac aacatccagc
     7021 atcgacttca gcgtcagctc aatgccttca accatcgcag acatatccgg gttagcttta
     7081 tcagccactt ccagcgcacg atccaggcta tcaatcaccg gcagcaattc gttgatgaat
     7141 ttctccagcg caaatttgtg ggctttttca atatccagtt cagtacgtcg acgcaggttt
     7201 tccatttcgg cttttacacg caaaatgccg tcacgttcac gggtctgggc ttcagccagc
     7261 tgagcttcga gattcgcaat tttttcatcg cgcggatcca cctgctcagc agaagcttct
     7321 ggctcaactg cctcaatctc ttcgtgctga tccatgataa tttcttccgg ggcttgcccc
     7381 tcaggcgttt tctgttcttt actactcatg aatttctccg cgtttttttc gcattcatct
     7441 cgctaacttc gcttattatg gggatcagtt tcagggtttc aagggaagca ctcacattgt
     7501 catcaatctt cgcaacaagg acctcggaaa aatgaataat catttcaagt gtattggcat
     7561 tgtgggacac ccacggcacc ccactgcact gacaacacat gaaatgctct accgctggct
     7621 gtgcaaaaaa ggttacgagg tcatcgttga gcaacaaatc gctcacgaac tgcaactgaa
     7681 gaatgtgaaa actggcacgc tcgcggagat tgggcaacta gctgatctcg cggtagtcgt
     7741 tggtggcgac ggtaatatgc tgggcgcggc acgcacactc gcccgttacg atattaaagt
     7801 tattggaatc aaccgtggca acctgggttt cctgactgac cttgaccccg ataacgccca
     7861 gcaacagtta gccgatgtac tggaaggcca ctacatcagc gagaaacgtt ttttgctgga
     7921 agcgcaagtc tgtcagcaag attgccagaa acgcatcagc accgcgataa atgaagtggt
     7981 gcttcatcca ggcaaagtgg cacatatgat tgagttcgaa gtgtatatcg acgagatctt
     8041 tgcgttttct cagcgatctg atggactaat tatttcgacg ccaacaggct ccaccgccta
     8101 ttccctctct gcaggcggtc ctattctgac cccctctctg gatgcgatta ccctggtgcc
     8161 catgttcccg catacgttgt cagcacgacc actggtcata aacagcagca gcacgatccg
     8221 tctgcgtttt tcgcatcgcc gtaacgacct ggaaatcagt tgcgacagcc agatagcact
     8281 gccgattcag gaaggtgaag atgtcctgat tcgtcgctgt gattaccatc tgaatctgat
     8341 tcatccgaaa gattacagtt atttcaacac attaagcacc aagctcggct ggtcaaaaaa
     8401 attattctaa ttttacgcca gcctctttac tgtatataaa accagtttat actgtacgca
     8461 ataacagtaa tggtttttca tacaggaaaa cgactatgtt ggcacaactg accatcagca
     8521 actttgctat cgttcgtgag cttgagattg attttcatag cggcatgacc gtaataactg
     8581 gcgagaccgg cgcgggtaaa tctattgcaa tagatgccct cggtctttgt ctcggtggtc
     8641 gcgctgaagc cgacatggtg cgtaccggcg ctgctcgcgc tgacctgtgc gcccgttttt
     8701 ctctgaaaga tacgccagcg gctctgcgct ggctggaaga aaatcagctt gaagacgggc
     8761 atgaatgttt gcttcgtcgc gtaatcagca gcgatggtcg ctcccgtggt ttcatcaacg
     8821 gtacagctgt tcctctgtca caactgcgcg aactgggtca gttgctgatt cagatccatg
     8881 gtcagcacgc tcatcaatta ctcaccaaac ctgagcacca aaaattcctg cttgatggct
     8941 atgccaatga aacctctcta ctgcaggaaa tgaccgcacg ttatcagttg tggcatcaaa
     9001 gctgccgtga cctcgcgcat catcaacagt taagtcagga acgcgccgcc cgtgcggaac
     9061 tgctgcaata ccaattaaaa gaacttaacg aatttaatcc gcagcccgga gagtttgaac
     9121 aaatcgacga agagtacaaa cgtctggcga acagcggtca attgctgacc accagccaga
     9181 atgcattggc attaatggcc tacggtgaag acgcaaacct gcaaagtcag ctttacacgg
     9241 ctaaacaact ggtgagcgaa ttgattggca tggacagcaa actgtccggc gtacttgata
     9301 tgctggaaga agctaccatc cagattgctg aagccagcga tgaactgcgc cactactgcg
     9361 atcgtctgga tctcgatccc aaccgactat ttgaacttga acagcgcatc tcaaaacaga
     9421 tttcgctggc acgtaaacat cacgtcagcc ctgaggcatt gccacagtat taccagtcgc
     9481 tactggaaga acagcagcaa ctggacgatc aggccgactc acaagaaacg cttgcgctgg
     9541 cggtaacgaa acatcatcag caggcactgg aaatcgcgcg cgcattacac caacaacgcc
     9601 agcaatatgc agaagaactt gcacagctga tcaccgacag tatgcatgcg ctctcaatgc
     9661 cgcatgggca gtttacgatc gatgttaaat ttgacgagca tcacctgggc gctgacggtg
     9721 ccgatcgtat tgagtttcgg gtaaccacca acccaggtca gccaatgcag cctattgcca
     9781 aagtcgcatc cggtggtgaa ttgtcccgca tcgcactggc aacccaggtc atcacggcgc
     9841 gtaaaatgga aaccccggca ctgatttttg atgaagtgga tgtagggatt agcggtccaa
     9901 cagcggcagt tgtcggcaaa ctgctgcgtc aactcggcga atcaactcag gtgatgtgtg
     9961 ttacccacct gccacaagtc gcgggatgtg gtcatcaaca ctattttgtc agcaaagaaa
    10021 ccgatggtgc gatgacagaa acgcatatgc aatccctgaa taaaaaagcg cggttacaag
    10081 agctggcgcg cctgcttggt ggcagtgaag tcacacgtaa tacactggcg aatgcgaaag
    10141 aactgcttgc agcgtaaact tttttcctgc ttcacggtca gagtaaacag caaaacgccg
    10201 taagaccgga aagcaaaagg ttttaaagtg atgaaaggtc tattatcatc ggcatattac
    10261 agatgagcca cgtactgcta gggcccgaaa aggaatcaaa tcactatgcg ctgtaaaacg
    10321 ctgactgctg cagcagcagt actattgatg ttgaccgcag gctgttccac tctggagcga
    10381 gtggtttacc gtcctgacat caaccagggg aactatctga ccgctaacga cgtatccaaa
    10441 atacgtgttg gcatgacgca acaacaagtt gcgtacgcat tgggtacacc gctgatgtcc
    10501 gatccatttg gtacgaatac ctggttctat gtcttccgcc agcaaccagg tcatgaaggt
    10561 gtaacgcagc aaacgctgac gctgaccttt aacagtagcg gtgtgttgac caatattgat
    10621 aacaaacctg cgctgagtgg taactaataa taaaattgct ctcaaagacg ttaaaaaagg
    10681 tgctcaatga gcaccttttt tctgtctgtt atttattcgc tgatttttct gctcgttgcc
    10741 tgcgaagctc tttcggatcg gcaatgagag ggcgataaat ctccacccga tcgccatcat
    10801 gcacactgtc gcttagtttt gccggacggc tgtaaatgcc gactttgttt ttagttaaat
    10861 cgatatcggt acgcaattcc agcaagccac tggcgcgaat agcttcttca accgtcgcgc
    10921 cctcctgcag cgtcacgcgc tgcaggtact gcttctcagg tagcgcataa gccacctcaa
    10981 cggcaatttt acctggcact gtaaacctct ttcgcacgaa ccgtaaaagc ctggaccata
    11041 ttagacgcca gctctttaaa cacgcgacca aaggcgagtt caatcaactt attggtaaac
    11101 tcaaagtcga gatgaaactc gatacgacac gcctcctggc tcagcggcgt aaacttccat
    11161 ccaccaatca atttcttgaa cggcccatcc accagattca taagaatact ttggttactg
    11221 gtcaactggt tgcgggtagt aaacgttttg ctgatcccag ccttagagac atctaccgcc
    11281 gcagtcatct gcccaggagt ggactccaga atccgacttc cggtacaacc cggcaaaaac
    11341 tgaggataag actgaacgtc attcactaac tgatacattt gctccgcgct gtagggtacc
    11401 agtgcggtcc ggctaatctg aggcataact atttccatca acaaaaatcc aacaaataat
    11461 atcatttatc ctgctgtaaa aaaaacgcta tcccggcgct gggtaacatc gggttcatgc
    11521 taagatagag ccttgtcccc cgcaggattg atatggggtg ttttcgattt cagattaccg
    11581 atgattcacg acgcttatga cgaagaaaaa agcacataaa cctggttcag cgaccatcgc
    11641 gcttaacaag cgcgcccgtc acgaatactt tatcgaagaa gagttcgaag cgggacttgc
    11701 cctgcaaggc tgggaagtta aatccctgcg cgcaggaaaa gccaatatca gcgacagcta
    11761 cgtccttctg cgtgacggag aggcatttct gtttggcgct aacatcacgc caatggccgt
    11821 ggcctccacg catgtggtgt gcgatcctac ccgtacccgc aagttacttc tcaaccagcg
    11881 cgaactggac tcattgtacg gtcgcgtcaa tcgagaaggc tataccgtag tggcgctctc
    11941 cctgtactgg aaaaatgcct ggtgcaaagt gaaaatcggc gtcgccaaag gtaaaaaaca
    12001 gcacgataaa cgttcagata tcaaagaacg cgaatggcag gtggataaag cacgtatcat
    12061 gaaaaacgcc caccgttaaa cctgcactcc aattattgac cagttcctca ccgcgcctcc
    12121 ctctccggcg gcgcgaatga acatcttatt ggctatcaca tccgacacaa atgttgccat
    12181 cccattgctt aatcgaataa aaatcaggct acatgggtgc taaatcttta acgataacgc
    12241 cattgaggct ggtcatggcg ctcataaatc tggtatactt gccgttacac attggggctg
    12301 attctggatt cgacgggatt tgcgaaaccc aaggtgcatg ccgaggggcg gttggcctcg
    12361 taaaaagccg caaaaaatag tcgcaaacga cgaaaactac gctttagcag cttaataacc
    12421 tgcttagagc cctctctccc tagcctccgc tcttaggacg gggatcaaga gaggtcaaac
    12481 ccaaaagaga tcgcgtggaa gccctgcctg gggttgaagc gttaaaactt aatcaggcta
    12541 gtttgttagt ggcgtgtccg tccgcagctg gcaagcgaat gtaaagactg actaagcatg
    12601 tagtaccgag gacgtaggaa tttcggacgc gggttcaact cccgccagct ccaccaatca
    12661 tgattggacg gtataaggac aacaccaata aaaacaggag gttagcagtc tcagcaggac
    12721 accgaccaga cggtgaagag acataaaagg atacgcaaag gagccgcggc tcctggtgac
    12781 atgaaagccc acagatgtgg gctttttcgt tgatggtcag aacgaccagt tcacaccagc
    12841 taccccgttc cacggggatt ccacaccggc accatggcta taccccaccc caagatgccc
    12901 gcttaacgta ctgctgaatg aggctttaat acctgcctgg tatattccac gtctgcccga
    12961 caaatcattg acgaaattac cgtcactatt cactttcacc cggttatcat cgacaaattc
    13021 tttgcgcaca gccgccttca gccacggctc aacttccata ccgttcccca gacgcatgtt
    13081 gtaactcagc gttgcaccca gttcacgata taaacctgcg ggtatcgact gatttcgatt
    13141 ccatgccatt ggataaatga tattcagggt tatcagcggt gaacccccgt taacgatgca
    13201 tacggcgtca ggttccagtt accatcggta aatcgcatcc cggtttcaat gtgaccgccc
    13261 agcccgttgc tgcgataact gccgttggtg gctccaccgc tgccaaccgt ggagtcgcga
    13321 gcttcggtac ctgctaatac caataaatta ccgccatttt ccagcaacat attggtcgct
    13381 aaattgccgg aaatggaaaa agtgccgtac tggtgagtac cgctgatttc aataccgtta
    13441 gccgtgctcg tctggagagc ggcaccgctg ttctggacga tatctgtcgc tttgccatta
    13501 tcgttaactg tcagcgtacc gccttcattg atctttgttt ttattgcctc tccgttagct
    13561 gaaactgttt gtattccgcc gtcgttaatc gttgtctcat tcgccacccc ctcgacgatt
    13621 tgttcgccgc cggtgagcgt cgtgcctgtc gcagtggctt ttgttttgac gatctcccgt
    13681 ccgcccgtat tgacctgtgt tttgtcagaa gaggtgtctg actccacggt taacacgccg
    13741 ccatttgcca gcaggatatt gttcgccgca ccctgctcga tgctgaacgc gacgccatcc
    13801 gcgcgtgttc ctgtgacccg cgtcgccctg gtggttgcaa ccaaagcgcc ctggctactc
    13861 tgctgtatcc ccgttgcgct gcctttctcc cgcacatcga gtgtgccgcc gtcattaagc
    13921 accgagtttt cagccagacc gccctcatta actacctgtg aacccccatt aataatggaa
    13981 ccttccgctg tcccgtttgc cataatttgt tgtaggccag agacgatatc ggtattgatt
    14041 gccttaccat aattctgaac ggtttgcgtg ccaccattga tgtgtgtttt ctctgttgac
    14101 ccaccatcaa caatttgttc accactttcg atatttgcct cagtggctaa tccatatacc
    14161 gtttgcttgc cacctttgat atttgcttta tcagaagtgg cactggcata tattgtttgg
    14221 gtgccagcac tattgagtac agtgccaaca tcttttccat aaacatccat tttgccgttg
    14281 gcattaataa tcgtatcaac tgcccgggaa ccagtgacga ctgttaatga gccagcgttt
    14341 tccagcacta catttttagc ttctgaattc ctgatgtaga aagcatcacc ataactgttg
    14401 gttcctttga taagggttcc ggaagttgtg gaagcaatta atgcgccgcc ggattgttgc
    14461 tcaacatgct tagcctcacc accgtcctga acctccagaa cgccaccatt attaagtctg
    14521 gtggtatctg ttttagcctc cttctggaca atcagcttac cgccagcatc aacggtagta
    14581 tttttcgccg aggttttagc cactaccgtc agttcgccgg tattttccag cacaacataa
    14641 ttagcctccc ctccgggtaa tagtgaagtg agagagcttg ttgtatcctt cgatatcagt
    14701 ccctgcgccc gtgttggcaa ctaaagcact gcccgtctcc tggttaaccc catgtgctat
    14761 accgccggta tagacaatca gcgagcctcc ggcgctaata ttgctgccag ttgccgtacc
    14821 atctttctca acaacctgcc ggctcccggt ggaaatattt gtcgtgtcag ctttcccgcc
    14881 gctcttgata ttttgtgttc cgctcttgat attttgtgtt ccgctgttga tattggtacc
    14941 cgtggcaata ccatgattat taatattctg tgtaccacca ttgattatgg tattggtcgc
    15001 gtttccggta acatccatta ccccgccgtt atctattcgg gtcgcatcag ctttagcatt
    15061 cgttaaaact gacattgttc ctttatcttt aataatcgtc ttatttgccg aaccatatgc
    15121 gtttatgtct aaatgaccac c
//
LOCUS       DADMJE010000099        14938 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.100, whole genome shotgun sequence.
ACCESSION   DADMJE010000099 DADMJE010000000
VERSION     DADMJE010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14938)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14938)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14938
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.100"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..452
                     /locus_tag="JN001_002686"
     CDS             <1..452
                     /locus_tag="JN001_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312811.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY9053867.1"
                     /translation="QEVNAALFKEYLPLLQQSEPTIKQPVRWKNALGELNANLDISIA
                     DPAKSSSSTNKDIKSLNFDVKLPLNVVTETAKQLNLSEGMDAEKAQKRADKQISGMMT
                     LGQMFQLITIDNNTASLQLRYTPGKVVFNGQEMSEEEFMSRAGRFVH"
     gene            complement(493..1425)
                     /locus_tag="JN001_002687"
     CDS             complement(493..1425)
                     /locus_tag="JN001_002687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY9053868.1"
                     /translation="MANLLNKFIMTRILAAITLLLSIVLTILVTIFCSVPIIIAGIVK
                     LLLPVPVIWRKVSRFCDFMMYCWCEGLAVLLHLNPHLQWEVHGLEGLSKKNWYLLICN
                     HRSWADIVVLCVLFRKHIPMNKYFLKQQLAWVPFLGLACWALDMPFMKRYSRAYLLRH
                     PERRGKDVETTRRSCEKFRLHPTTIVNFVEGSRFTQEKHQQTHSTFQNLLPPKAAGIA
                     MALNVLGKQFDKLLNVTLCYPDNNRQPFFDMLSGKLTRIVVHVDLQPIADELHGDYIN
                     DKSFKRHFQQWLNSLWQEKDRLLTSLMSSQRQDK"
     gene            complement(1545..1787)
                     /locus_tag="JN001_002688"
     CDS             complement(1545..1787)
                     /locus_tag="JN001_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053869.1"
                     /translation="MSVPVYQIMGKGCHRQDKNMSFSPLFVKIFCRSSGSLANRHVDN
                     FVHKLFTSLLIYYHAFYSMMFVFVFHVVKNKAIPNN"
     gene            1789..4575
                     /gene="polA"
                     /locus_tag="JN001_002689"
     CDS             1789..4575
                     /gene="polA"
                     /locus_tag="JN001_002689"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HAY9053870.1"
                     /translation="MVQIPQNPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLN
                     MLRSLIMQYKPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVKAM
                     GLPLLAVSGVEADDVIGTLAREAEKAGRPVLISTGDKDMAQLVTPNITLINTMTNTIL
                     GPEEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEP
                     EKIAGLSFRGAKTMAAKLQQNKEVAYLSYQLATIKTDVELELTCEQLEVQQPAAEELL
                     GLFKKYEFKRWTADVEAGKWLQAKGAKPAAKPQETSVADEAPEVTATVISYDNYVTIL
                     DEETLKAWIAKLEKAPVFAFDTETDSLDNISANLVGLSFAIEPGVAAYIPVAHDYLDA
                     PDQISRERALELLKPLLEDEKALKVGQNLKYDRGILANYGIELRGIAFDTMLESYILN
                     SVAGRHDMDSLAERWLKHKTITFEEIAGKGKNPLTFNQIALEEAGRYAAEDADVTLQL
                     HLKMWPDLQKHKGPLNVFENIEMPLVPVLSRIERNGVKIDPKVLHNHSEELTLRLAEL
                     EKKAHEIAGEEFNLSSTKQLQTILFEKQGIKPLKKTPGGAPSTSEEVLEELALDYPLP
                     KVILEYRGLAKLKSTYTDKLPLMINPKTGRLHTSYHQAVTATGRLSSTDPNLQNIPVR
                     NEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAE
                     VFGLPLETVTSEQRRSAKAINFGLIYGMSAFGLARQLNIPRKEAQKYMDLYFERYPGV
                     LEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAAAERAAINAPMQGTAADII
                     KRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDVDAVAKQIHQLMENCTRLDVPL
                     LVEVGSGENWDQAH"
     gene            complement(4957..5589)
                     /locus_tag="JN001_002690"
     CDS             complement(4957..5589)
                     /locus_tag="JN001_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418301.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HAY9053871.1"
                     /translation="MTNLNYQQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALN
                     TLTNQKSLARTSKTPGRTQLINLFEVADGKRLVDLPGYGYAEVPEEMKRKWQRALGEY
                     LEKRHSLQGLVVLMDIRHPLKDLDQQMIEWAVDSNIAVLVLLTKADKLASGARKAQLN
                     MVREAVLAFNGDVQVETFSSLKKQGVDKLRQKLDTWFSEMQPVEETQDGE"
     gene            6171..6680
                     /gene="yihI"
                     /locus_tag="JN001_002691"
     CDS             6171..6680
                     /gene="yihI"
                     /locus_tag="JN001_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Der GTPase-activating protein YihI"
                     /protein_id="HAY9053872.1"
                     /translation="MKPSSSNSRSKGHAKARRKTREELDQEARDRKRQKKRRGHAPGS
                     RAAGGNTTSGSKGQNAPKDPRIGSKTPIPLGVTEKVTKQHKPKSEKPMLSPQAELELL
                     ETDERLDALLERLEAGETLSAEEQSWVDAKLDRIDELMQKLGLSYDDDEEEEEDEKQE
                     DMMRLLRGN"
     gene            6869..8242
                     /gene="hemN"
                     /locus_tag="JN001_002692"
     CDS             6869..8242
                     /gene="hemN"
                     /locus_tag="JN001_002692"
                     /EC_number="1.3.98.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HAY9053873.1"
                     /translation="MSVQQIDWDLALIQKYNYSGPRYTSYPTALEFSEDFGEQAFLQA
                     VARYPERPLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAG
                     RHVSQLHWGGGTPTYLNKAQISRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLR
                     AEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNIDLIYGLPKQT
                     PESFAFTLKRMAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAF
                     LTQSGYQFIGMDHFARPDDELAVAQREGVLHRNFQGYTTQGDTDLLGMGVSAISMIGD
                     CYAQNQKELKQYYQQVDEQGNALWRGIALTRDDCIRRDVIKSLICNFRLDYAPIEKQW
                     DLHFADYFAEDLKLLAPLAKDGLVDVDEKGIQVTAKGRLLIRNICMCFDTYLRQKARM
                     QQFSRVI"
     gene            complement(8432..8542)
                     /gene="yshB"
                     /locus_tag="JN001_002693"
     CDS             complement(8432..8542)
                     /gene="yshB"
                     /locus_tag="JN001_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YshB family small membrane protein"
                     /protein_id="HAY9053874.1"
                     /translation="MLESIINLVSSGAVDSHTPQTAVAAVLCAAMIGLFS"
     gene            complement(8653..10062)
                     /gene="glnG"
                     /locus_tag="JN001_002694"
     CDS             complement(8653..10062)
                     /gene="glnG"
                     /locus_tag="JN001_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012133942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HAY9053875.1"
                     /translation="MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALA
                     SKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYL
                     PKPFDIDEAVALVERAISHYQEQQQPRNIQLNGPTTDIIGEAPAMQDVFRIIGRLSRS
                     SISVLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFT
                     GANTIRQGRFEQADGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRI
                     IAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLARHFLQVAARELG
                     VEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGELFESTVAE
                     STSQMQPDSWATLLAQWADRALRSGHQNLLSEAQPELERTLLTTALRHTQGHKQEAAR
                     LLGWGRNTLTRKLKELGME"
     gene            complement(10074..11123)
                     /gene="glnL"
                     /locus_tag="JN001_002695"
     CDS             complement(10074..11123)
                     /gene="glnL"
                     /locus_tag="JN001_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HAY9053876.1"
                     /translation="MATGTQPDAGQILNSLINSILLIDDNLEIHYANPAAQQLLAQSS
                     RKLFGTPLPELLSYFSLNIELMQESLEAGQGFTDNEVTLVIDGRSHILSVTAQRMPDG
                     MILLEMAPMDNQRRLSQEQLQHAQQVAARDLVRGLAHEIKNPLGGLRGAAQLLSKALP
                     DPSLLEYTKVIIEQADRLRNLVDRLLGPQLPGTRVTESIHKVAERVVTLVSMELPDNV
                     RLIRDYDPSLPELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGER
                     YRLAARIDVEDNGPGIPPHLQDTLFYPMVSGREGGTGLGLSIARNLIDQHSGKIEFTS
                     WPGHTEFSVYLPIRK"
     gene            complement(11297..12706)
                     /gene="glnA"
                     /locus_tag="JN001_002696"
     CDS             complement(11297..12706)
                     /gene="glnA"
                     /locus_tag="JN001_002696"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--ammonia ligase"
                     /protein_id="HAY9053877.1"
                     /translation="MSAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFF
                     EEGKMFDGSSIGGWKGINESDMVLMPDASTAVIDPFFADSTLIIRCDILEPGTLQGYD
                     RDPRSIAKRAEDYLRSTGIADTVLFGPEPEFFLFDDIRFGSSISGSHVAIDDIEGAWN
                     SSTQYEGGNKGHRPAVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAG
                     QNEVATRFNTMTKKADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLS
                     KNGVNLFAGDKYAGLSEQALYYIGGVIKHAKAINALANPTTNSYKRLVPGYEAPVMLA
                     YSARNRSASIRIPVVSSPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHPGEA
                     MDKNLYDLPPEEAKEIPQVAGSLEEALNELDLDREFLKAGGVFTDEAIDAYIALRREE
                     DDRVRMTPHPVEFELYYSV"
     gene            13079..14902
                     /gene="typA"
                     /locus_tag="JN001_002697"
     CDS             13079..14902
                     /gene="typA"
                     /locus_tag="JN001_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000570679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-dependent GTPase TypA"
                     /protein_id="HAY9053878.1"
                     /translation="MIEKLRNIAIIAHVDHGKTTLVDKLLQQSGTFDSRAETQERVMD
                     SNDLEKERGITILAKNTAIKWNDYRINIVDTPGHADFGGEVERVMSMVDSVLLVVDAF
                     DGPMPQTRFVTKKAFAYGLKPIVVINKVDRPGARPDWVVDQVFDLFVNLDATDEQLDF
                     PIVYASALNGIAGLDHEDMAEDMTPLYQAIVDHVPAPDVDLDGPFQMQISQLDYNSYV
                     GVIGIGRIKRGKVKPNQQVTIIDSEGKTRNAKVGKVLGHLGLERIETDLAEAGDIVAI
                     TGLGELNISDTVCDTQNVEALPALSVDEPTVSMFFCVNTSPFCGKEGKFVTSRQILDR
                     LNKELVHNVALRVEETEDADAFRVSGRGELHLSVLIENMRREGFELAVSRPKVIFREI
                     DGRKQEPYENVTLDVEEQHQGSVMQALGERKGDLKNMNPDGKGRVRLDYVIPSRGLIG
                     FRSEFMTMTSGTGLLYSTFSHYDDVRPGEVGQRQNGVLISNGQGKAVAFALFGLQDRG
                     KLFLGHGAEVYEGQIIGIHSRSNDLTVNCLTGKKLTNMRASGTDEAVVLVPPIRMTLE
                     QALEFIDDDELVEVTPTSIRIRKRHLTENDRRRANRAPKDY"
BASE COUNT         3865 a         3746 c         3849 g         3478 t
ORIGIN      
        1 tgcaagaagt gaatgctgca ttgttcaaag agtatttacc gttattacaa caaagtgagc
       61 cgaccattaa acaaccggta agatggaaga acgcactcgg cgaactaaat gccaatctgg
      121 atatcagtat tgccgaccca gccaaatctt catcatccac aaacaaagat atcaaatcgc
      181 tcaattttga tgtgaagtta ccgcttaatg tcgtcacaga aaccgcaaaa cagcttaatt
      241 tatctgaagg aatggatgcg gaaaaagcgc aaaagcgggc tgataaacaa atcagcggga
      301 tgatgacctt aggtcagatg tttcagttaa tcacgattga caacaatacc gcctcgctgc
      361 aactgcgtta tacaccgggt aaagttgttt ttaacggaca ggagatgagc gaagaagaat
      421 ttatgtctcg tgccggacgt tttgttcatt aaaatactca ctcgcctctg ctcattcaga
      481 ggcgagcaaa atttacttgt cctgccgctg tgatgacatc aacgacgtca gaagtcggtc
      541 tttttcctgc cacagtgagt tcagccattg ctgaaaatgg cgcttaaagc ttttgtcatt
      601 gatgtagtcg ccatgtaact catcggcaat aggctgtaaa tccacatgaa cgacaattcg
      661 cgtcagttta ccgcttaaca tatcgaagaa cggctgacgg ttattgtccg gataacacag
      721 cgtaacatta agcagtttat cgaattgttt acccagtaca tttagcgcca tcgcaatgcc
      781 tgccgccttt ggtggcaaca agttttgaaa agtggagtgg gtttgctgat gtttttcttg
      841 cgtgaaacgg gagccttcaa cgaaattgac aatggtggtg ggatgcaggc gaaacttttc
      901 acaagaacgc cgagtggttt caacatcttt accacgtcgc tccggatgac gtaataaata
      961 agcgcgggaa taacgcttca taaacggcat atccagcgcc cagcacgcca ggccaagaaa
     1021 tggcacccag gccagctgtt gcttgaggaa atatttattc atcggaatgt gcttacgaaa
     1081 cagcacgcac agtacgacaa tatctgccca actacggtgg ttacaaataa gcagatacca
     1141 gttcttctta cttaaccctt ccagcccgtg aacttcccat tgcaggtgtg ggttcagatg
     1201 cagtaatacc gccagacctt cacaccagca atacatcata aaatcacaaa aacgcgaaac
     1261 ctttcgccaa atgactggca caggtagcaa tagttttaca atcccggcaa tgatgatcgg
     1321 gacggaacaa aaaatagtga ccaaaatggt caatacgata ctcagcaaaa gggttatcgc
     1381 agcgagtatt ctcgtcataa tgaatttatt caaaaggtta gccatagaca gtgcgctaaa
     1441 gaagcgcaag gcgcagattt tagcagaaaa cgacccaaat aacggatgat ccttaaggag
     1501 aaaaataatt catatctatc cacattagaa aaaatcccat tatctcaatt attagggatg
     1561 gctttatttt taactacatg aaaaacaaag acaaacatca tactgtaaaa agcatgataa
     1621 taaattaaaa gcgatgtaaa taatttatgc acaaagttat ccacatgacg atttgcgagc
     1681 gatccagaag atctacaaaa gattttcacg aaaagcggtg aaaaactcat gtttttatcc
     1741 tgtctgtggc atcctttacc cataatctga taaacaggca cggacattat ggttcagatc
     1801 ccccaaaatc cacttatcct tgtagatggt tcatcttatc tttatcgcgc atatcacgcg
     1861 tttcccccgc tgactaacag cgcaggcgag ccgaccggtg cgatgtatgg tgtcctcaac
     1921 atgctgcgca gtctgatcat gcaatataaa ccgacgcatg cagcggtggt ctttgacgcc
     1981 aagggaaaaa cctttcgtga tgaactgttt gaacattaca aatcacatcg cccgccaatg
     2041 ccggacgatc tgcgagcaca aatcgaacct ctgcacgcga tggttaaagc gatgggactg
     2101 ccgctgctgg cggtttctgg cgtagaagcg gacgacgtta tcggtactct ggcgcgcgaa
     2161 gccgaaaaag ccgggcgtcc ggtgctgatc agcactggcg ataaagatat ggcgcagctg
     2221 gtgactccaa atattacgct tatcaatacc atgacgaata ccatcctcgg accggaagag
     2281 gtggtgaata agtacggcgt gccgccagaa ctgatcatcg atttcctggc gctgatgggt
     2341 gactcctccg ataacatccc tggcgtaccg ggcgtcggtg aaaaaaccgc gcaggcattg
     2401 ctgcaaggtc tgggcgggct ggatacgctg tatgccgagc cagaaaaaat tgctgggttg
     2461 agcttccgtg gcgcgaaaac aatggcagcg aagctccagc aaaacaaaga agttgcttat
     2521 ctctcatacc agctggcgac gattaaaacc gacgttgaac tggagctgac ctgtgaacaa
     2581 ctggaagtgc agcaaccggc agcggaagag ttgttggggc tgttcaaaaa gtatgagttc
     2641 aaacgctgga ctgctgatgt cgaagcgggc aaatggttac aggccaaagg ggcaaaacca
     2701 gccgcgaagc cgcaggaaac cagtgttgca gacgaagcgc cagaagtgac ggcaacggtg
     2761 atttcttatg acaactacgt caccatcctt gatgaagaaa cactgaaagc gtggattgcg
     2821 aagctggaaa aagcgccggt atttgcattt gataccgaaa ccgacagcct tgataacatc
     2881 tctgctaacc tggtcgggct ttcttttgct atcgagccag gcgtagcggc atatattccg
     2941 gttgctcatg attatcttga tgcgcccgat caaatctctc gcgagcgtgc actcgagttg
     3001 ctaaaaccgc tgctggaaga tgaaaaggcg ctgaaggtcg ggcaaaacct gaaatacgat
     3061 cgcggtattc tggcgaatta cggcattgag ctgcgtggga ttgcgtttga taccatgctg
     3121 gagtcctaca ttctcaatag cgttgccggg cgtcacgata tggacagcct cgcggaacgt
     3181 tggttgaagc acaaaaccat cacttttgaa gagattgcgg gtaaaggcaa aaatccactg
     3241 acctttaacc agattgccct cgaagaggcc ggacgttacg ccgccgaaga tgctgatgtc
     3301 accttgcagt tgcatctgaa aatgtggccg gacctgcaaa aacacaaagg gccgttgaac
     3361 gtcttcgaga atatcgaaat gccgctggtg ccggtgcttt cacgcattga acgtaacggt
     3421 gtgaagatcg atccgaaagt gctgcacaat cattctgaag agctcacctt gcgtctggct
     3481 gagctggaaa agaaagcgca tgaaattgca ggtgaagaat ttaacctttc ttccaccaag
     3541 cagttgcaaa ccattctgtt tgaaaaacag ggtattaaac cgctgaagaa aacgccgggt
     3601 ggcgcgccgt caacgtcgga agaggtactg gaagaactgg cgctggacta tccgttgcca
     3661 aaagtgattc tggagtatcg tggtctggcg aagctgaaat cgacctacac cgacaagctg
     3721 ccgctgatga tcaacccgaa aaccgggcgt ttgcatacct cttatcacca ggcagtaact
     3781 gcaacgggac gtttatcgtc aaccgatcct aacctgcaaa acattccggt gcgtaacgaa
     3841 gaaggtcgtc gtatccgcca ggcgtttatt gcgccagagg attatgtgat tgtctcagcg
     3901 gactactcgc agattgaact gcgcattatg gcgcatcttt cgcgtgacaa aggcttgctg
     3961 accgcattcg cggaaggaaa agatatccac cgggcaacgg cggcagaagt gtttggtttg
     4021 ccactggaaa cagtcaccag cgagcaacgc cgtagcgcga aagcgatcaa ctttggtctg
     4081 atttatggca tgagtgcttt cggtctggcg cggcaattga acattccacg taaagaagcg
     4141 cagaagtaca tggaccttta cttcgaacgc taccctggcg tgctggagta tatggaacgc
     4201 acccgtgctc aggcgaaaga gcagggctac gttgaaacgc tggacggacg ccgtctgtat
     4261 ctgccggata tcaaatccag caatggtgct cgtcgtgcag cggctgaacg tgcagccatt
     4321 aacgcgccaa tgcagggaac cgccgccgac attatcaaac gggcgatgat tgccgttgat
     4381 gcgtggttac aggctgagca accgcgtgta cgtatgatca tgcaggtaca cgatgaactg
     4441 gtatttgaag ttcataaaga tgatgttgat gccgtcgcga agcagattca tcaactgatg
     4501 gaaaactgta cccgtctgga tgtgccgttg ctggtggaag tggggagtgg cgaaaactgg
     4561 gatcaggcgc actaagattc gcctgaacat gccctttttt cgtaagtaag caacataagc
     4621 tgtcacgttt tgtgatggct attagaaatt cctatgcaac aactgaaaaa aaattacaaa
     4681 aagtgctttc tgaactgaac aaaaaagagt aaagttagtc gcgtagggta cagaggtaag
     4741 atgttctatc tttcagacct tttacttcac gtaatcggat ttggctgaat attttagccg
     4801 ccccagtcag taatgactgg ggcgtttttt attgggcgaa agaaaagatc cgtaatgcct
     4861 gatgcgctat gtttatcagg ccaacggtag aattgtaatc tattgaattt acgggccgga
     4921 tacgccacat ccggcacaag cattaaggca agaaaattat tcgccgtcct gcgtttcttc
     4981 tacaggctgc atctcgctaa accaggtatc cagtttctgc cgcagcttgt ccacgccttg
     5041 tttcttcaac gaagaaaacg tttcaacctg cacatcaccg ttaaacgcca gtacagcttc
     5101 acgcaccata ttcaattgcg ctttacgtgc gccgcttgcc agtttgtccg ctttggtcag
     5161 cagcaccaga acggcgatat tgctgtctac cgcccactca atcatctgct gatccaaatc
     5221 tttcagcgga tggcgaatat ccattagcac caccagacct tgcaggctat gacgtttttc
     5281 gaggtattcg ccgagcgcac gctgccattt gcgcttcatc tcttccggga cttccgcata
     5341 accgtaccca ggcaagtcaa ccagacgctt gccgtcagcc acttcaaaca ggttgataag
     5401 ctgggtgcgc cctggggttt ttgaggtacg agccaggctt ttctggttag tcagcgtgtt
     5461 cagcgcgctg gatttacctg cgttggaacg gcctgcaaaa gccacttcaa ttccggtatc
     5521 ggaaggtagg tggcgaatat caggcgcact catcacaaaa tgcgtctgtt gataattcaa
     5581 attagtcaaa gcggtcgtct ccgtcagtca aagctttgtg gcgattatac ctgaaccata
     5641 ataaaaggcg gatttttcgg cgtgagcgtt gtaagtaaaa gccatacgct ttgtgagaca
     5701 ttgccgatag tctttatgcg aaatagcaga gaaaattctg cgatgcatgt caaataagct
     5761 atataaatca gtgaattgct tttatataaa actctgaaaa tgtgcaaata ctgatggcgg
     5821 ttgattgttt gtttaaagcg aaggcgtaaa gtagcaccca tagagcgagg acgctaacag
     5881 gaacaatgac tcaggatgag ggtcaggagc gccaggaggc gaagacagag gattgtcagg
     5941 aagacaaacg tccggagacg taattaaacg gaaatggaat caacacggat tgttccggct
     6001 aaaggaaaaa cagggtgtgt tggcggcctg caaggattgt aagacccgtt aagggttatg
     6061 agtcaggaaa aaaggcgaca gagtaatctg tcgccttttt tctttgcttg ctttctgtta
     6121 gattccgccg caaatcgata ctgaataaaa cggctaaaag acgaaccatt atgaaaccat
     6181 catcttcaaa ctcacgcagc aaaggtcatg caaaagcgcg tcgaaaaaca cgcgaggagc
     6241 tggatcagga agctcgtgat cgcaagcgtc agaaaaaacg tcgtggtcat gcgccgggca
     6301 gccgcgcagc gggcggaaac accacgtcag gcagcaaagg ccagaacgca ccaaaagatc
     6361 cacgtattgg cagtaaaacc cctattccat tgggcgtgac tgaaaaagtc accaaacagc
     6421 acaaaccgaa gagtgagaaa cctatgcttt caccgcaggc ggagttggaa ttactggaaa
     6481 cggatgagcg tctggatgcg ctgctggaac gtctggaagc aggcgaaacc ctgagtgccg
     6541 aagagcaatc ctgggtggat gctaaactgg atcgtattga tgagttgatg cagaaactcg
     6601 gcctctctta tgacgatgac gaagaagagg aagaagacga gaagcaagaa gacatgatgc
     6661 gtctgctgcg gggcaactaa cggattgccg ccgtgggcct tcccgttctg ctgataaccc
     6721 ttccggttat atgttatctg gtgtggttat tcgttaaact acagcggttg tcgcggcgac
     6781 aaaagtggct gcgcaaccgg ctgatgaccc gaaacgggca tccgccggta cgccgtagcc
     6841 gccagagacg ccatcggaag gagtgagcat gtctgtacag caaatcgact gggatctggc
     6901 cctgatccag aaatataact attccgggcc acgatacacc tcgtacccga ccgcgctgga
     6961 gttttcagaa gacttcggcg aacaggcgtt tttacaagcc gtggcgcgct atcctgagcg
     7021 tccattatct ctctacgtac atatcccgtt ctgccataag ctttgttact tctgcggttg
     7081 caataagatt gttactcgcc agcagcacaa ggccgatcag tatctggacg cgctggagca
     7141 agaaatcgtc catcgtgcac cgctgttcgc cgggcgtcac gtcagccaat tgcactgggg
     7201 cggcggaacg ccgacgtatc tgaataaagc gcaaatcagc cgcctgatga agctgctgcg
     7261 cgaaaacttc cagttcaatg ccgatgcgga gatttcgatc gaagtcgatc cgcgggaaat
     7321 cgaactggat gtactcgatc atttacgcgc cgaaggcttt aatcgcctga gcatgggcgt
     7381 gcaggacttc aacaaagaag tgcaacgtct ggttaaccgc gagcaggatg aagagttcat
     7441 ctttgcactg cttaaccatg cgcgtgagat tggttttacc tccaccaaca tcgacctgat
     7501 ttacggcctg ccgaaacaga cgccggagag tttcgccttt accctgaaac gtatggcgga
     7561 gctgaacccc gatcgtctga gtgtctttaa ctacgcgcat ctgccgacca tttttgctgc
     7621 tcagcgcaaa atcaaagatg ctgacctgcc gagtccgcag caaaaactcg atatcctgca
     7681 ggaaaccatc gccttcctga cgcaatcggg ctatcagttt atcggtatgg atcactttgc
     7741 ccgtccggat gacgagctgg cggtggccca gcgtgaaggc gtgctgcatc gtaacttcca
     7801 aggctacacc actcagggcg ataccgatct gctggggatg ggcgtttccg ccatcagcat
     7861 gattggcgac tgctacgcgc agaaccagaa agagttgaag cagtactatc agcaagtgga
     7921 tgaacaaggc aatgcgctgt ggcgtggtat tgcgctaacg cgtgatgact gtattcgccg
     7981 cgatgtgatt aagtcgctca tctgcaactt ccgtctggat tacgccccta ttgagaaaca
     8041 gtgggatttg cacttcgctg attactttgc ggaagatctc aagctgctcg ccccgttagc
     8101 aaaagatggg ctggtggatg tggatgagaa gggaatacag gtgacggcga aaggtcgctt
     8161 gctgatccgc aacatttgca tgtgctttga tacctatctg cgccagaaag cgcggatgca
     8221 gcagttctca cgggtgattt gaatagtgaa tggcgcttcg tttacaaagt agaaaacgaa
     8281 agcgccatca atgtgctgag aacaagattg cctgatgcgc tacgcttatc aggcctacaa
     8341 aacctgttga aaatattgct tttgtaggcc ggataaggcg ttcacgccgc atccggcatg
     8401 aacaaagagc acttcatcag caatctgaaa ctcaactaaa cagcccaatc attgcggcac
     8461 acagcacggc agcaacggca gtttgcggtg tgtggctgtc aactgcgcca ctcgatacca
     8521 gattaattat tgattccagc ataatgactc tccccgtttt ccgggcagat catactgaac
     8581 ttatcggaac agtaaagcgt aaaataccag caatttgcgc tcaataatca atctttacac
     8641 acaagctgtg aatcactcca tccccagctc ttttaactta cgcgtcaggg tgttgcggcc
     8701 ccagccgagt agccgcgccg cttcctgttt atgcccctgc gtatgtcgca acgcggtcgt
     8761 cagtaacgtc cgctccagct ctggctgcgc ttcggaaagc agattttgat gaccggaacg
     8821 cagcgctctg tctgcccact gcgcaagaag cgtcgcccag ctgtccggtt gcatttgcga
     8881 agtactctcc gcaaccgttg attcaaacag ttcgccgggc aaatcctgaa tcaacacttc
     8941 ctgcccggcg gccatcaccg ttagccagcg gcaggtgttt tccagctggc gcacgttgcc
     9001 tggccacgcc agacgcgtca gagcagcttc ggtttccgga tgcagtaact tcgcttctac
     9061 gcccagttcg cgcgcggcaa cctgtaaaaa atggcgcgcc agacggggaa tatcttcccg
     9121 acgttcgcgc agcggcggta gatgaacgcg gataacgttt aggcggtgga acagatcctc
     9181 acggaactta ccttcctgca ctcgctgttc gagattctgg tgagtggcag cgataatccg
     9241 cacatccact ttcaccggcg catagccgcc aacgcggtaa aactgaccgt ctgccagcac
     9301 gcgcagcaaa cgcgtctgca catccagcgg catatcacca atttcgtcga ggaataatgt
     9361 accgccatcg gcctgttcaa aacgcccctg acgaatggta ttcgcgccag taaacgcgcc
     9421 tttctcgtgg ccaaacagtt ctgattcgat caaatctttt gggatagctg ccatattcag
     9481 cgcgataaac ggtgctttgg cgcgcggact gtggcgatgc agggcatgag cgaccagttc
     9541 tttaccggtg ccggattcgc cgttaatcag cacgctaata gaagaacgcg aaagccgacc
     9601 gataatacgg aacacgtcct gcatggctgg cgcttcgccg atgatatcgg tcgttgggcc
     9661 gttaagctga atattacgcg gctgctgctg ttcctggtaa tgactgatag cgcgctcaac
     9721 cagcgccacg gcttcgtcga tatcaaacgg tttgggcaga taatcaaacg ccccttgttg
     9781 ataggcgctg acggcagcat ccagatcgga atgtgcggtc ataatgatga ccggaagcat
     9841 tggatggcgc tgtttaatct gcttgagcag cgccagcccg tccattcccg gcatacggat
     9901 atctgaaagc agcacatccg gcgttttgct cgccagcgcc tccagtactt ccgcgccgtt
     9961 ctcaaatgtc gtacaggtta aacccgctcc agcgagcgca cgttcaagca cccaacggat
    10021 ggaactatcg tcatcgacta cccagactat ccctcgttgc ataaacgtca cctttatttc
    10081 ctgataggca ggtaaaccga gaactcggta tgacctggcc aactggtaaa ttcaattttg
    10141 cctgaatgct gatcaatcaa attacgggcg atggataagc caagcccggt gccaccttcg
    10201 cggccgctga ccatcgggta aaacagcgta tcctgcaaat gaggcggaat gcccggcccg
    10261 ttatcttcca catcaatccg cgccgccagc cggtagcgct cgccgtgtaa ggtcagttga
    10321 aacgcggtgc gggtacgcag aatgatttca ccgccttccg gccccagcgc ctgtagcgca
    10381 ttgcgcacaa tattcagcaa gacctgttca atttgatccg ggtcgtgcgc cagttccggc
    10441 aggctgggat cgtaatcacg aatcaaccgc acgttgtccg gcagttccat cgacaccagc
    10501 gttaccacgc gttcagccac tttgtgaata ctttcggtaa cgcgcgtacc gggcagctgc
    10561 ggccccaaca gacggtcgac cagatttcgc agccggtccg cctgttcgat aatcactttg
    10621 gtatattcga gtagtgatgg gtcaggtaac gctttgctga gcagctgcgc cgcgccacgt
    10681 aaaccgccaa gcggattttt aatctcatgt gccaggccgc gcactaaatc acgggcagca
    10741 acctgctggg cgtgctgtag ctgttcctga cttaagcggc gctggttatc catcggagcc
    10801 atctccagca ggatcatgcc gtccggcata cgctgggccg tcacagaaag gatatgcgag
    10861 cgcccgtcga tgaccagcgt cacttcgtta tcggtaaaac cttgccccgc ctccagactt
    10921 tcttgcatca gctcgatatt taatgagaag tagctcaaca gttccggtaa cggtgtacca
    10981 aacaatttgc gggagctttg ggcgagcagt tgttgcgcgg cagggttggc gtaatggatc
    11041 tccaggttgt catcgattaa caaaatactg ttaatcagcg agttgaggat ctgcccagca
    11101 tcgggctgcg tgcctgttgc cataaagcag tctcctgaac aggttgcacc attttagtgc
    11161 attatagctt tttacggata aaaagcgcga agcatcagag aattgacgga gaaaaaagcc
    11221 catgcagaga tgggctgaaa gtttccacgg caactaaatc ccggcgttgt tgcgccgggt
    11281 agtacaactt caactattag acgctgtagt acagctcaaa ctctaccgga tgcggagtca
    11341 tacgcacgcg gtcatcttct tcgcgacgca gagcgatgta cgcatcaatt gcttcgtcag
    11401 tgaacacgcc accggctttc aggaactcgc ggtccagatc cagttcgttc agtgcttctt
    11461 ccagagagcc tgcaacctgt gggatctctt tcgcttcttc tggcggcagg tcatacaggt
    11521 ttttgtccat ggcttcaccc ggatggatct tgttcttgat accatcaaga ccggccatca
    11581 gcagggcagc aaagcacagg tacgggttag ctgccggatc cgggaaacgt acttcgatac
    11641 gacgtgcttt cggagaagaa accaccggaa tacggataga cgcagaacgg ttacgcgcag
    11701 agtaagccag cattaccggt gcttcatagc ccgggaccag acgcttataa gagttggtgg
    11761 tcgggtttgc cagggcgtta atcgctttag cgtgtttgat tacgccgcca atgtagtaca
    11821 gcgcctgctc agacagacct gcgtatttgt cgcctgcgaa caggttaacg ccgtttttag
    11881 acagagacat gtggcagtgc ataccggagc cgttatcacc gaacatcggt tttggcataa
    11941 aggtcgcggt tttaccgaag cggtgcgcta cgttgtgcac aacatatttg tagatctgaa
    12001 tttcgtcagc ttttttggtc atggtattga agcgggtagc cacttcgttc tgaccagcag
    12061 tcgctacttc gtggtgatgg gcttcaacca ccagccccat ctgttccatc accagacaca
    12121 tttcagaacg aatatcctga gccgagtcta ccggtggaac cgggaagtaa ccgcctttca
    12181 ctgccggacg gtgacctttg ttaccacctt cgtattgggt ggaggagttc catgcgcctt
    12241 cgatatcgtc gatagcaacg tgggaaccgg agatagatga tccgaaacgg atgtcatcga
    12301 acaggaagaa ttcaggttct ggcccgaaca gtacggtgtc ggcaatgcca gtggaacgca
    12361 ggtaatcttc ggcgcgcttc gcaatggagc gcgggtcacg gtcatagcct tgcagggtgc
    12421 caggttcaag gatgtcgcaa cggataatca gggtggagtc ggcgaagaac gggtcaatca
    12481 ctgcggtgga tgcgtctggc atcagcacca tgtcggactc gttaatgcct ttccagccgc
    12541 caatcgagga gccgtcaaac attttgcctt cttcgaagaa ttcagcattc acctgatgag
    12601 cagggatagt gacgtgctgt tctttacctt tagtatcggt gaagcgcaaa tcaacaaact
    12661 tcacttcgtg ctcgttcagc atcgtcagta cgtgttcagc ggacatactt taactctcct
    12721 ggattggtca tggtcgtcgt ggtaacgaaa tctgcaatta ttttggccgt gtcgccgtaa
    12781 aaaagataaa gcgaaatctg tgccaacttt taaattgccc ctaaaaggcg ttatcatgcg
    12841 caccatcgtg caaaagggct gcaccacgat gtgaatgttg caccaatata gtgcttcaat
    12901 ggaaacatta agcaccatgt tggtgcaatg acctttggat aacccttttt atgctccgtg
    12961 aaagcgatca caaagggact ctgcaatact tgtttgcgga ggatgtttgt gatcctgttt
    13021 tgtagtgcga ttaatccgtg tacaataacg cgctatttct aatgcctgag gcaaagttgt
    13081 gatcgaaaaa ttgcgtaata tcgccatcat cgcgcacgta gaccatggta aaaccaccct
    13141 ggtagacaag ctgctccaac aatccggtac gttcgactct cgtgccgaaa cccaagagcg
    13201 cgtgatggac tccaacgatt tggagaaaga gcgtgggatt accatcctcg cgaaaaacac
    13261 cgctatcaaa tggaatgatt accgtatcaa catcgttgat accccggggc acgccgactt
    13321 cggtggtgaa gttgaacgtg taatgtccat ggtagactca gtgctgctgg tggttgacgc
    13381 atttgacggc ccgatgccgc aaacgcgctt cgtaaccaaa aaagcgtttg cttacggcct
    13441 gaagccgatt gttgttatca acaaagttga ccgccctggc gcgcgtcctg attgggttgt
    13501 ggatcaggta ttcgatctgt tcgttaacct cgacgcgacc gacgagcagc tggacttccc
    13561 gatcgtttac gcttctgcgc tgaacggtat cgcgggtctg gaccacgaag atatggcgga
    13621 agacatgacc ccgctgtacc aggcgattgt tgaccacgtt cctgcgccgg acgttgacct
    13681 tgacggtccg ttccagatgc agatttctca gctcgattac aacagctatg ttggcgttat
    13741 cggcattggc cgcatcaagc gcggtaaagt gaagccgaac cagcaggtca ctatcatcga
    13801 tagcgaaggc aaaacccgca acgcgaaagt cggtaaagtg ctgggccacc tcggtctgga
    13861 acgtatcgaa accgacctgg cggaagctgg cgatatcgtt gcgatcacgg gccttggcga
    13921 actgaacatt tctgacaccg tttgcgacac gcaaaacgtt gaagcgctgc cggcactctc
    13981 cgttgatgag ccgaccgttt ctatgttctt ctgcgttaac acctcgccgt tctgcggtaa
    14041 agaaggtaag ttcgtaacgt ctcgtcagat cctggatcgt ctgaacaaag aactggtaca
    14101 caacgttgcg ctgcgcgtag aagaaaccga agacgctgat gcgttccgcg tttctggtcg
    14161 tggcgaacta cacctgtctg ttctgatcga aaacatgcgt cgtgaaggtt tcgaactggc
    14221 ggtatcccgt ccgaaagtta tcttccgtga aatcgacggt cgtaaacaag agccatatga
    14281 aaacgtgact ctggacgttg aagaacagca tcagggttct gtaatgcagg cgctgggcga
    14341 acgtaaaggc gacctgaaaa acatgaatcc agacggtaaa ggccgcgtac gtctcgacta
    14401 cgtgatccca agccgtggtc tgattggctt ccgttctgag ttcatgacca tgacttccgg
    14461 tactggtctg ctgtactcca ccttcagcca ctacgacgac gtacgtccgg gtgaagtggg
    14521 tcagcgtcag aacggcgtac tgatctctaa cggtcagggt aaagcggtcg cgttcgcgct
    14581 gttcggtctg caggatcgcg gtaagctgtt cctcggtcac ggtgcagaag tttacgaagg
    14641 tcagattatc ggtattcata gccgctctaa cgacctgact gtaaactgcc tgaccggtaa
    14701 gaaactgacc aacatgcgtg cttccggtac tgacgaagcc gttgttctgg ttccgcctat
    14761 ccgcatgact ctggaacaag ctctggagtt catcgatgat gacgaactgg tagaagtgac
    14821 tccgacctct atccgtattc gtaaacgtca cctgacggaa aacgatcgtc gtcgcgccaa
    14881 ccgcgcaccg aaagactatt aatttcgttt tttagttata aaaaacctgc catcgctg
//
LOCUS       DADMJE010000100        14602 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.101, whole genome shotgun sequence.
ACCESSION   DADMJE010000100 DADMJE010000000
VERSION     DADMJE010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14602
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.101"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..967
                     /locus_tag="JN001_002698"
     CDS             <1..967
                     /locus_tag="JN001_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053879.1"
                     /translation="WVGTKSLALTIPWDPKEKPNSSKCYCKDIYKDENTGDFLVMLWK
                     SDTDSTGSLLGASEDGEIGSSSVVKYTNSYRGKKVIWGRPCFYWVIPELETIVSIKFD
                     HSVCDSELFQDYVHSSITNRVKHSKRVKNKTEKGYIRLSNTDDEDLYKYMYRFDMKLR
                     SLETTHTELGKLIPKITHIVRRETIIINPNDARADWLKTFSTLVPFVSGKKNAKTRQI
                     EIKAEAKPSLNEVQEIIEKYSAEDREKRLWDNVGFATDKGITWVDKYRMRDILNVPSD
                     DYSTYSAAYIYEQISHKRKEFISPILKELKALQSQPRIKKASGED"
     gene            968..1504
                     /locus_tag="JN001_002699"
     CDS             968..1504
                     /locus_tag="JN001_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004152200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053880.1"
                     /translation="MLKAIAGIAKYTWIYMAIFIISLMIISSSDINYVYNDFANYCTL
                     LVSVSGMVFTIMGIWLAFLYPNALQRIVNPKTIETVDFTEQLEDTRRLEAIVGSVLKS
                     SFVMITLLVVYLVKLVFFKSHLYLESQDVIKNTSLALIIAISYMQIEAVISVILANVM
                     FINDLHNKREQRDIDDQV"
     gene            1455..2465
                     /locus_tag="JN001_002700"
     CDS             1455..2465
                     /locus_tag="JN001_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053881.1"
                     /translation="MIYITSESKETLMIKYEGKMKKNIRVIPKNIHSKLRRLGNTVVA
                     GTSIAFTENQLKSGALEHLGIYFDNGVNAYETSVIPDPLQGKYSLKNVFGEEIVRKDL
                     PKETHYTEIESPNWGDSSNGTHTVRLPYEKYPRDIIPPTLIAIEINHKQPSDSHFIFN
                     FRVTRILDKQSNKFDDELLFDLNLLQENLGKCGIEDADKPISTYADTLIVSWEIFPPG
                     SKEETLARIFRGKNITSDKKNVAENRYDFFMSLEPKKIVTGNSTFSNYIGAMLEDDLV
                     VFENIEYGNAIYILYDNWDDISKLSRIDLLSGRAGSNFDRIIHSGNWKDEVRKKVAAG
                     RL"
     gene            complement(2520..3785)
                     /locus_tag="JN001_002701"
     CDS             complement(2520..3785)
                     /locus_tag="JN001_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001522431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY9053882.1"
                     /translation="MKLNARQVETAKPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRR
                     PSDKKEDRLAFGVWPTVTLAQARAKRDQAKKLLAQGIDPKAEQKEAQAENSGAYSFET
                     IAREWHASNKRWSEDHRSRVLRYLELYIFPHIGSSDIRQLKTSHLLAPIKKVDASGKH
                     DVAQRLQQRVTAIMRYAVQNDYIDSNPASDMAGALSTTKARHYPALPSSRFPEFLARL
                     AAYRGRVMTRIAVELSLLTFVRSSELRFARWDEFDFDKSLWRVPAKREEIKGVRYSYR
                     GMKMKEEHIVQLSRQAMILLNQLKQISGDKELLFPGDHDATKVMSENTVNSALRAMGY
                     DTKTEVCGHGFRTMARGALGESGLWSEDAIERQLSHSERNNVRAAYIHTSEHLDERRL
                     MVQWWADYLQANKGKTITPYDFAKINKSR"
     gene            complement(3949..4033)
                     /locus_tag="JN001_002702"
     tRNA            complement(3949..4033)
                     /locus_tag="JN001_002702"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3997..3999),aa:Leu,seq:caa)
     gene            4229..5248
                     /gene="ahr"
                     /locus_tag="JN001_002703"
     CDS             4229..5248
                     /gene="ahr"
                     /locus_tag="JN001_002703"
                     /EC_number="1.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent aldehyde reductase Ahr"
                     /protein_id="HAY9053883.1"
                     /translation="MSMIKSYAAKEAGGELEVYEYDPGELRPQDVEVQVDYCGICHSD
                     LSMIDNEWGFSQYPLVAGHEVIGRVVALGSAAQDKGLQVGQRVGIGWTARSCGHCDAC
                     ISGNQINCEQGAVPTIMNRGGFAEKLRADWQWVIPLPENIDIESAGPLLCGGITVFKP
                     LLMHHITATSRVGVIGIGGLGHIAIKLLHAMGCEVTAFSSNPAKEQEVLAMGADKVVN
                     SRDPQALKALSGQFDLIINTVNVSLDWQPYFEALTYGGNFHTVGAVLTPLSVPAFTLI
                     AGDRSISGSATGTPYELRKLMRFAARSKVAPTTELFPMSKINDAIKHVRDGKARYRVV
                     LKADF"
     gene            5378..6880
                     /locus_tag="JN001_002704"
     CDS             5378..6880
                     /locus_tag="JN001_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF853 domain-containing protein"
                     /protein_id="HAY9053884.1"
                     /translation="MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLA
                     ESLSEIGVPVFMADVKGDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFG
                     EKGHPVRATVSDLGPLLLARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQY
                     IGDNAKSFQNQYGNISSASVGAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKG
                     VINILSAEKLYQMPKLYAASLLWMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAP
                     QVLLDKIEQVIRLIRSKGVGVWFVSQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKEV
                     KAAAQTMRANPAFDTEKAIQELGTGEALISFLDAKGSPSVVERAMVIAPCSRMGPVTE
                     DERNGLINHSPVYGKYEDDVDRESAYEMLQKGFQASTKQQNNPPAKGKAVAVDDGILG
                     GLKDILFGTTGPRGGKKDGVVQTMAKSAARQVTNQIVRGMLGSLLGGRRR"
     gene            complement(7041..8123)
                     /gene="lptG"
                     /locus_tag="JN001_002705"
     CDS             complement(7041..8123)
                     /gene="lptG"
                     /locus_tag="JN001_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313266.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptG"
                     /protein_id="HAY9053885.1"
                     /translation="MQPFGVLDRYIGKTIFTTIMMTLFMLVSLSGIIKFVDQLKKAGQ
                     GSYDALGAGMYTLLSVPKDVQTFFPMAALLGALLGLGMLAQRSELVVMQASGFTRMQV
                     ALSVMKTAIPLVLLTMAIGEWVAPQGEQMARNYRAQAMYGGSLLSTQQGLWAKDGNNF
                     VYIERVKGDEELGGISIYAFNENRRLQSVRYAATAKFDPEHKVWRLSQVDESDLTNPK
                     QITGSQTVSGTWKTNLTPDKLGVVALDPDALSISGLHNYVKYLKSSGQDAGRYQLNMW
                     SKIFQPLSVAVMMLMALSFIFGPLRSVPMGVRVVTGISFGFVFYVLDQIFGPLTLVYG
                     IPPIIGALLPSASFFLISLWLLMRKS"
     gene            complement(8123..9223)
                     /gene="lptF"
                     /locus_tag="JN001_002706"
     CDS             complement(8123..9223)
                     /gene="lptF"
                     /locus_tag="JN001_002706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter permease LptF"
                     /protein_id="HAY9053886.1"
                     /translation="MIIIRYLVRETLKSQLAILFILLLIFFCQKLVRILGAAVDGDIP
                     ANLVLSLLGLGVPEMAQLILPLSLFLGLLMTLGKLYTESEITVMHACGLSKAVLVKAA
                     MILAVFTAIVAAVNVMWAGPWSSRHQDEVLAEAKANPGMAALAQGQFQQATNGSSVLF
                     IESVDGSDFKDVFLAQIRPKGNARPSVVVADSGHLTQLRDGSQVVTLNQGTRFEGTAL
                     LRDFRITDFQDYQAIIGHQAVALDPNDTDQMDMRTLWNTDTDRARAELNWRITLVFTV
                     FMMALMVVPLSVVNPRQGRVLSMLPAMLLYLLFFLIQTSLKSNGGKGKLDPTLWMWTV
                     NLIYLALAIVLNLWDTVPVRRLRASFSRKGAV"
     gene            9490..11001
                     /gene="pepA"
                     /locus_tag="JN001_002707"
     CDS             9490..11001
                     /gene="pepA"
                     /locus_tag="JN001_002707"
                     /EC_number="3.4.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase"
                     /protein_id="HAY9053887.1"
                     /translation="MEFSVKSGSPEKQRSACIVVGVFEPRRLSPIAEQLDKISDGYIS
                     ALLRRGELEGKPGQTLLLHHVPNVLSERILLIGCGKERELDERQYKQVIQKTINTLND
                     TGSMEAVCFLTELHVKGRNNYWKVRQAVETAKETLYSFEQLKTNKSEPRRPLRKMVFN
                     VPTRRELTSGERAILHGLAIAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNV
                     ITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNASEDARPIVLVGKGLTFDS
                     GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRP
                     GDVLTTMSGQTVEVLNTDAEGRLVLCDVLTYVERFEPEAVIDVATLTGACVIALGHHI
                     TGLMANHNPLAHELIAASEQSGDRAWRLPLGDEYQEQLESNFADMANIGGRPGGAITA
                     GCFLSRFTRKYNWAHLDIAGTAWRSGKAKGATGRPVALLAQFLLNRAGFNGEE"
     gene            11161..11604
                     /gene="holC"
                     /locus_tag="JN001_002708"
     CDS             11161..11604
                     /gene="holC"
                     /locus_tag="JN001_002708"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004098129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit chi"
                     /protein_id="HAY9053888.1"
                     /translation="MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACE
                     DEKQAYRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTS
                     FADFATAFTEVVDFVPYEDSLKQLARERYKAYRVAGFNLNTATWK"
     gene            11604..14459
                     /gene="valS"
                     /locus_tag="JN001_002709"
     CDS             11604..14459
                     /gene="valS"
                     /locus_tag="JN001_002709"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000416368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HAY9053889.1"
                     /translation="MEKTYNPQDIEQPLYEHWEKQGYFKPNGDESQESFCIMIPPPNV
                     TGSLHMGHAFQQTIMDTMIRYQRMQGKNTLWQVGTDHAGIATQMVVERKIAAEEGKTR
                     HDYGREAFIDKIWEWKAESGGTITRQMRRLGNSVDWERERFTMDEGLSNAVKEVFVRL
                     YKEDLIYRGKRLVNWDPKLRTAISDLEVENRESKGSMWHIRYPLADGAKTADGKDYLV
                     VATTRPETLLGDTGVAVNPEDPRYKDLIGKYVILPLVNRRIPIVGDEHADMEKGTGCV
                     KITPAHDFNDYEVGKRHALPMINILTFDGDIRESAQVFDTKGNESDVYSSEIPAEFQK
                     LERFAARKAVVAAVDALGLLEEIKPHDLTVPYGDRGGVVIEPMLTDQWYVRADVLAKP
                     AVEAVENGDIQFVPKQYENMYFSWMRDIQDWCISRQLWWGHRIPAWYDEAGNVYVGRN
                     EEEVRKENNLGADVALRQDEDVLDTWFSSALWTFSTLGWPENTDALRQFHPTSVMVSG
                     FDIIFFWIARMIMMTMHFIKDENGKPQVPFHTVYMTGLIRDDEGQKMSKSKGNVIDPL
                     DMVDGISLPELLEKRTGNMMQPQLADKIRKRTEKQFPNGIEPHGTDALRFTLAALAST
                     GRDINWDMKRLEGYRNFCNKLWNASRFVLMNTEGQDCGFNGGEMTLSLADRWILAEFN
                     QTIKAYREALDSFRFDIAAGILYEFTWNQFCDWYLELTKPVMNGGTEAELRGTRHTLV
                     TVLEGLLRLAHPIIPFITETIWQRVKVLCGITADTIMLQPFPQYDASQVDEAALADTE
                     WLKQAIVAVRNIRAEMNIAPGKPLELLLRGCSADAERRVNENRGFLQTLARLESITVL
                     PADDKGPVSVTKIIDGAELLIPMAGLINKEDELARLAKEVAKIEGEISRIENKLANEG
                     FVARAPEAVIAKEREKLEGYAEAKAKLIEQQAVIAAL"
     gene            complement(14515..>14602)
                     /locus_tag="JN001_002710"
     CDS             complement(14515..>14602)
                     /locus_tag="JN001_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF898 domain-containing protein"
                     /protein_id="HAY9053890.1"
                     /translation="PLINKEEQPDKGFLASISRGIMPSLPFL"
BASE COUNT         3857 a         3511 c         3765 g         3469 t
ORIGIN      
        1 ttgggtggga actaaatctc ttgcactcac gataccatgg gatccaaaag aaaaaccaaa
       61 cagttcaaag tgttattgca aggatattta taaggatgaa aatactggtg atttcttagt
      121 catgttatgg aaatctgata ctgatagtac gggctcttta ttaggagcta gtgaagacgg
      181 tgaaatcgga agctcatcgg tggttaaata tactaatagc tacagaggga aaaaagttat
      241 ctgggggcgg ccatgctttt attgggttat acctgaactt gaaactatag tatccattaa
      301 attcgaccat tctgtttgtg attctgaact atttcaagac tatgtacact catctattac
      361 taatagagtt aaacatagca aaagggttaa aaataaaacc gagaaaggtt atataaggct
      421 atctaatacc gatgacgaag acttatataa atatatgtac aggtttgata tgaagctcag
      481 aagcttagaa accactcata ctgagttagg taaactaata ccaaaaataa cacacatagt
      541 tcgcagggaa actattatta taaatccaaa tgatgcacga gctgattggt taaagacctt
      601 tagcactctc gttccatttg tgtccggaaa gaaaaatgcc aaaacaagac aaattgaaat
      661 aaaagcagaa gcaaaaccat ccttgaatga agttcaagaa atcattgaaa agtattcggc
      721 tgaggataga gaaaaacgtc tttgggacaa tgttggattt gctacagaca agggtataac
      781 ttgggtggat aaatatagaa tgcgtgatat tctcaatgtc ccttctgacg actattcaac
      841 atattccgcc gcatatattt acgaacaaat atcacacaaa agaaaagaat ttatttcccc
      901 tatattaaaa gaattaaaag cattacaatc tcaaccaaga ataaagaaag catctggaga
      961 ggattgaata ttgaaagcta tagcaggcat agccaaatac acatggatat acatggcgat
     1021 attcattata tcgctgatga ttatttcgtc atccgatatt aactatgtgt ataacgattt
     1081 tgccaactat tgcactcttc tcgtatcagt ttctggaatg gtttttacta ttatgggaat
     1141 ttggttagcg tttctttacc caaatgcttt gcagcgtatt gtgaacccca aaactataga
     1201 aaccgttgat ttcaccgaac aactggaaga tacaagaaga ttagaagcaa tagttggaag
     1261 tgttctaaaa tcatctttcg ttatgattac tttacttgtt gtatacttag ttaaactagt
     1321 gtttttcaaa agtcatcttt atttagagag ccaagatgta ataaaaaaca catctttagc
     1381 attaattatt gctatttcgt acatgcagat tgaggcagta attagcgtaa tacttgcaaa
     1441 tgttatgttt atcaatgatt tacataacaa gcgagagcaa agagacattg atgatcaagt
     1501 atgagggaaa aatgaaaaag aatatacgtg ttatacctaa aaatattcat agcaagttaa
     1561 gaaggcttgg taatacagtt gttgctggca cttctattgc atttacggaa aaccaattaa
     1621 aaagtggagc attagagcac cttggaatat attttgataa tggtgttaat gcttatgaga
     1681 cgtcggtcat accagatcca ttgcagggta aatattcact taaaaatgtt tttggtgaag
     1741 aaattgtcag aaaagacctc ccaaaagaaa ctcattacac tgaaattgag tcacctaact
     1801 ggggtgatag ctctaatggt acacatactg ttagattacc ttacgagaaa tatcccagag
     1861 acattatacc accaacactc atagccattg aaattaatca caaacagccc tcggacagcc
     1921 atttcatatt taacttcaga gtaactagaa ttttagacaa acaatcaaat aagtttgatg
     1981 atgaattatt atttgattta aatcttcttc aagaaaatct tggtaaatgt ggaattgagg
     2041 atgctgataa acccatatcg acttatgctg atacacttat agtctcatgg gaaatatttc
     2101 caccaggtag taaagaagaa actttagcaa gaatttttag aggtaaaaat atcacttccg
     2161 acaagaaaaa tgtcgctgaa aatagatatg acttcttcat gagtcttgaa cctaaaaaaa
     2221 tcgtcacagg aaacagcacg ttcagtaatt atattggagc tatgctggag gacgatttgg
     2281 ttgtatttga aaacatagaa tatggtaatg ctatatatat cctctatgat aactgggatg
     2341 atatcagcaa gctatctcga attgacttat tatcaggaag agcaggaagt aatttcgata
     2401 gaataatcca tagtggcaat tggaaagatg aagtacgaaa aaaagttgct gctggaagat
     2461 tatgatcaaa gtgtttaata cagaaataaa cgcctatata ttataggcgt ttattttcac
     2521 tatcgacttt tgtttatttt agcaaaatca taaggtgtta ttgttttgcc cttatttgct
     2581 tggagataat cagcccacca ttgaaccatc aatcgacgtt catccaaatg ttcagaggtg
     2641 tgaatataag cagcacgtac attattacgc tctgaatggc tcaactgtcg ttctatagca
     2701 tcttcactcc ataatccgga ctcgcccaac gcaccacggg ccatcgttct aaacccgtgc
     2761 ccgcaaactt cggttttcgt gtcatagccc atcgcacgca atgcgctatt taccgtgttt
     2821 tcgctcataa ccttagttgc gtcatgatca cccggaaaaa gcagctcttt atctccacta
     2881 atctgcttta actggtttag caaaatcatc gcctgccgac taagctgaac gatatgctcc
     2941 tctttcatct tcatgccacg gtacgagtaa cgcacacctt taatttcttc tcgttttgca
     3001 ggtactcgcc agagagattt atcgaagtcg aactcatccc aacgcgcgaa acgtaactca
     3061 ctggaacgca caaaagttag taaggaaagc tcaaccgcga tccgcgtcat tacacggcca
     3121 cgatatgcag caagacgagc aagaaactca gggaaccggc tggagggcaa agcggggtaa
     3181 tgtcgcgctt tggttgtcga tagcgcaccg gccatatcac tggctggatt tgagtcgatg
     3241 taatcgttct gtactgcata acgcataata gccgtgacac gctgctgaag gcgctgtgca
     3301 acgtcatgct taccactggc atcaactttt ttaatcgggg ctaataggtg gctagttttg
     3361 agctgacgga tgtcagatga accaatatga ggaaagatat aaagctcaag ataacgtaga
     3421 acgcgtgatc ggtgatcttc actccagcgc ttattactag catgccattc acgagcgata
     3481 gtttcgaaag aatatgcccc cgaattctcg gcctgagctt ctttctgttc ggcttttgga
     3541 tcaatgccct gcgctaacag ctttttagct tgatcgcgct ttgctcttgc ctgagcaagc
     3601 gtcacagtag gccaaacacc aaacgcgaga cgatcctctt ttttgtcaga gggacgtctg
     3661 tatttcatgc gccagtattt ggaacctttg gccgaaacct caagatacaa accaccacca
     3721 tcggccattt tgtaggtttt gtcttttggc tttgcggtct cgacctgtct ggcgttgagc
     3781 ttcatttggg ggcacatttc taatcgaagt taagatgccc ccaattatgc ccccaatgat
     3841 atccggattt caacggacaa cctcggaaga cgcaggacga aaaaatcgct gcaagcattg
     3901 attttaaagg gatatttgga ctttctcgga tggtcttgga agtaagaatg gtgccgaagg
     3961 ccggactcga accggcacgt atttctacgg ttgattttga atcaactgcg tctaccgatt
     4021 tcgccacttc ggcactgaag aggtatgcgg aaaacgttgt ggattatacc tgtcgcacgc
     4081 caccatgcaa gcgccagctt gctcgcacct cgctaagtgc tgaaattttc agcattgcac
     4141 acagcgatgt gtaacctttg tcacactcca ggcaccccgc cctgccatgc tctacacttc
     4201 ccaaacaaca ccagagaagg accaaaaaat gtcgatgata aaaagctatg ccgcaaaaga
     4261 agcgggcggc gaactggaag tttatgagta cgatcccggt gagctgaggc cacaagatgt
     4321 tgaagtgcag gtggattatt gcgggatctg ccattccgat ctatcgatga tcgacaatga
     4381 atggggattt tcacaatatc cgctggttgc cgggcatgag gtgattgggc gcgtggtggc
     4441 actcgggagc gccgcgcagg ataaaggttt gcaggtcggt cagcgtgtcg ggattggctg
     4501 gacggcgcgt agctgtggtc actgcgacgc ctgtattagc ggtaatcaga tcaactgcga
     4561 gcaaggtgcg gtgccgacga ttatgaatcg cggtggcttt gccgagaagt tgcgtgcgga
     4621 ctggcaatgg gtgattccac tgccagaaaa tattgatatc gagtccgccg ggccgctgtt
     4681 gtgcggcggt atcacggtct ttaaaccact gttgatgcac catatcactg ctaccagccg
     4741 cgttggggta attggtattg gcgggctggg gcatatcgct ataaaacttc tgcacgcaat
     4801 gggatgcgag gtgacggcct ttagttctaa tccggcgaaa gagcaggaag tactggcgat
     4861 gggtgccgat aaagtggtga atagccgcga tccgcaggca ctgaaagccc tgtcggggca
     4921 gtttgatctc attatcaata ctgtgaacgt cagcctcgac tggcagcctt attttgaggc
     4981 gctgacctat ggcggtaatt tccatacggt cggtgcggtt ctcacgccgc tgtctgttcc
     5041 ggcctttacg ttaattgcgg gcgaccgcag catctctggt tctgctaccg gcacgcctta
     5101 tgagctgcga aagctgatgc gctttgccgc ccgtagcaag gttgcgccga ccaccgaact
     5161 gttcccgatg tcgaaaatta acgatgccat caagcatgtg cgcgacggta aggcgcgtta
     5221 ccgcgtggtt ctgaaagccg acttctgatc cctttgccgg gtgcctgtcg cccggcactt
     5281 aaatctcttt ggaaggcgtc tcgcaatctg ctgaatttag cggtgaagag tgcgcagccg
     5341 ttgcctatac tccaggcagg aaactggagg aaatctcatg agcgaacccc tattaattgc
     5401 ccgcacgccg gacacagaac tttttttact gccgggaatg gctaaccgtc acgggctgat
     5461 tactggcgca acggggacgg gtaaaaccgt tacgctgcaa aaactggcag agtcattgtc
     5521 ggaaatcggc gtgccggtgt ttatggctga tgtgaaaggc gatctgaccg gtatcgcgca
     5581 ggcaggaacg gcgtcggaaa aactgctcac aaggcttaaa aatatcggcg tcaatgactg
     5641 gcaaccgcat gctaatccgg tggtggtgtg ggatatcttt ggcgagaaag gccatccggt
     5701 gcgggcgacg gtttcagacc tggggccgct gttgctggcg cggctgttga atctcaacga
     5761 tgtgcaatct ggcgtgctga atatcatctt ccgtattgct gacgatcagg gattgttgct
     5821 gctcgacttt aaagatctgc gggcgattac ccagtacatc ggcgataacg ccaaatcttt
     5881 ccagaatcag tacggtaata tcagtagcgc atcggttggt gccatccagc gcggtttact
     5941 gtcgctggaa aagcaaggtg cggcgcattt ctttggcgag ccgatgctgg atatcaaaga
     6001 ctggatgcgc accgatacca acggtaaagg cgttatcaat atcctcagcg ccgagaagct
     6061 ttatcagatg ccgaaactgt acgccgccag cctgctgtgg atgctttcag agttgtatga
     6121 acaattgccg gaagcgggcg atctggagaa accaaaactg gtgtttttct tcgacgaggc
     6181 acatctgctg tttaacgatg caccgcaggt actgctggat aagattgagc aggtaataag
     6241 gcttattcgc tcaaaaggcg tgggcgtctg gttcgtttcg caaaacccgt ctgatattcc
     6301 ggataatgtg ctcgggcagc tcggtaatcg cgttcaacac gctttgcggg cttttacgcc
     6361 caaagatcag aaagaggtaa aagctgcggc gcaaaccatg cgggccaatc cggcgtttga
     6421 taccgaaaag gcaatccagg aactggggac cggcgaggcg ttaatctcgt ttctcgatgc
     6481 aaaaggaagt ccttctgtgg tggaacgggc gatggtgatt gcgccttgtt cgcggatggg
     6541 accggtgacg gaagatgagc gcaatggctt gattaaccac tccccggtgt atggcaagta
     6601 cgaggatgac gtggaccggg aatccgccta tgagatgttg caaaaaggct ttcaggccag
     6661 taccaagcag caaaataatc ctcccgcgaa agggaaagcg gtggcggtgg atgacggtat
     6721 tcttggtgga ttgaaggata ttttgtttgg cactaccgga ccacgcggcg ggaagaaaga
     6781 tggtgtggtg caaacaatgg cgaaaagcgc cgcccgccag gtgacgaatc agattgtacg
     6841 tgggatgttg gggagtttgc tggggggaag aagaaggtaa gtcaggcgag atttgtcttt
     6901 gcctgatgcg acgctggcgc gtcttatcat gcctacacca ctgcaatata ttggattttc
     6961 atgatttttc aggcatgaac gaagcacact ttgctaacaa taataaaggg agctttcgct
     7021 ccctttattc gttcattcgg ttacgatttt ctcattaaca gccacaggct gattaagaag
     7081 aagctggcgc ttggcaacag tgcgccgatg atcggcggga tgccataaac caacgtcagc
     7141 gggccgaaga tctggtccag tacgtagaag acaaaaccga agctgatacc ggtgaccaca
     7201 cgcacgccca tcggtacgct acgcagtggg ccaaagatga acgacagcgc catcagcatc
     7261 atcaccgcca cggatagcgg ctggaagatt ttgctccaca tattgagctg ataacgtccg
     7321 gcatcctgac cgctcgactt cagatacttc acgtagttgt gcaaaccgct gattgagagt
     7381 gcatccgggt ccagcgccac cacgcccagt ttgtccggcg tgaggttggt tttccaggtg
     7441 ccgctcaccg tctgcgaacc ggtgatctgt ttcggattgg tcagatcaga ttcatcaacc
     7501 tgcgacagac gccagacttt atgttccggg tcaaacttcg cagtagcggc atagcgtacg
     7561 gattgcagac gacgattctc gttaaaggca taaatactga tgccacctaa ctcttcgtca
     7621 cctttaaccc gctcaatgta aacgaagttg ttgccatctt tcgcccataa gccttgctgg
     7681 gtagagagca acgagccgcc gtacatcgcc tgcgcacggt agttacgcgc catctgctcg
     7741 ccctgcggcg cgacccattc accaatcgcc atcgtcagca agaccagcgg aatggcggtt
     7801 ttcatcaccg acagcgcaac ctgcatacgg gtgaaaccag aagcctgcat caccaccagt
     7861 tcgctgcgct gcgccagcat cccaagacca agcaacgccc caagcagagc cgccatcggg
     7921 aagaatgttt gcacatcttt cggcacgctc agcaaggtat acattcctgc gcctaacgcg
     7981 tcgtaactcc cctgcccggc ttttttcagc tgatcgacaa atttgataat gcccgacagc
     8041 gacaccagca tgaacagcgt catcatgatg gtggtgaaaa tagttttacc gatatagcgg
     8101 tcaagtacgc caaaaggttg catcacaccg ctcctttacg cgaaaaactg gcgcgcaggc
     8161 ggcggaccgg cacggtgtcc caaaggttga gaacaatcgc caaagccaga taaatcaggt
     8221 taacggtcca catccacagc gtcgggtcca gcttaccttt accgccgttc gatttcaggg
     8281 aggtctggat caggaagaaa agtagataca gcagcatggc tggcagcatc gatagtacgc
     8341 gtccctgacg cgggttaacc acgctcagcg gtacgaccat aagtgccatc ataaacacgg
     8401 tgaataccaa cgtgatacgc cagttcagtt ctgcgcgggc acgatcggtg tcagtgttcc
     8461 acaatgtacg catgtccatc tggtcggtat cgttcgggtc gagcgctacc gcctggtgac
     8521 caatgatcgc ctgataatcc tggaagtccg taatgcggaa atcacgtaac agtgcagtgc
     8581 cttcgaagcg cgttccctgg ttgagagtga cgacctggga gccgtcgcgc agctgggtta
     8641 aatgtccgga atcggccacc accacagaag gacgtgcatt accttttggt cgaatttgcg
     8701 cgaggaacac atctttgaaa tcgctgccgt caacgctttc gatgaacagc accgagctgc
     8761 cattagtcgc ttgctggaat tgcccttgcg ccagcgccgc catgccaggg ttcgctttcg
     8821 cttctgctaa cacttcatcc tgatgacgcg atgaccacgg tcccgcccac atcacgttaa
     8881 ccgccgcgac gattgcagtg aataccgcaa ggatcattgc cgctttcacc agaaccgctt
     8941 tgctcaggcc gcaggcatgc attaccgtaa tttcactttc ggtatacagt ttgcccagcg
     9001 tcatcagcag cccgaggaac aggcttaatg gcaggataag ctgcgccatt tccggcacgc
     9061 ccaacccgag aagggagagc accagattcg ccggaatatc gccgtcaacc gctgcgccga
     9121 ggatcctcac taacttttga cagaagaaga tcaaaagcaa gatgaagagt atcgccagct
     9181 ggcttttgag cgtctcccgc accagatatc ttatgattat cactttaaat acgcccgtaa
     9241 aaactcgtct tttgcaggat tttagcttgt ttcatggctt aaacgtcatt tattctcttg
     9301 agtcgtcgaa atcgtcgcta agataattat actcaacgga ttcacctctc agattttgtt
     9361 ctgacgtgcc aatgccgtaa taacgttaag attaacacga agtcatcgca acagcggaca
     9421 tgagttacga aagcttgcaa ttctatctgt agccaccgcc gttgtcttta agattcagga
     9481 gcgtagtgca tggagtttag tgtaaaaagc ggtagcccgg agaaacagcg gagtgcctgc
     9541 atcgtcgtgg gcgtcttcga accacgtcgc ctttctccga ttgcagaaca gctcgataaa
     9601 atcagcgatg ggtacatcag cgccctgcta cgtcggggcg aactggaagg aaaaccgggg
     9661 cagacattgt tgctgcacca tgttccgaat gtactttccg agcgaattct ccttattggt
     9721 tgcggcaaag aacgtgagct ggatgagcgt cagtacaagc aggttattca gaaaaccatt
     9781 aatacgctga atgatactgg ctcaatggaa gcggtctgct ttctgactga actgcacgtt
     9841 aaaggccgta acaactactg gaaagtgcgt caggctgtcg agacggcaaa agagacgctc
     9901 tacagtttcg aacagctgaa aacgaacaag agcgaaccgc gtcgtccgct gcgtaaaatg
     9961 gtgttcaacg tgccgacccg ccgtgaactg accagcggtg agcgcgcgat cctgcacggt
    10021 ctggcgattg ccgccgggat taaagcagca aaagatctcg gcaatatgcc gccgaatatc
    10081 tgtaacgccg cttacctcgc ttcacaagcg cgccagctgg ctgacagcta cagcaagaat
    10141 gtcatcaccc gcgttatcgg cgaacagcag atgaaagagc tggggatgca ttcctatctg
    10201 gcggtcggtc agggttcgca aaacgaatcg ctgatgtcgg tgattgagta caaaggcaac
    10261 gcgtcggaag atgcacgccc aatcgtgctg gtgggtaaag gtttaacctt cgactccggc
    10321 ggtatctcga tcaagccttc agaaggcatg gatgagatga agtacgatat gtgcggtgcg
    10381 gcagcggttt acggcgtgat gcggatggtc gcggagctac aactgccgat taacgttatc
    10441 ggcgtgttgg caggctgcga aaacatgcct ggcggacgag cctatcgtcc gggcgatgtg
    10501 ttaaccacca tgtccggtca aactgttgaa gtgctgaata ccgacgctga aggccgcctg
    10561 gtactgtgcg acgtgttaac ttacgttgag cgttttgagc cggaagcggt gattgacgtg
    10621 gcgacgctga ccggtgcctg cgtgatcgcg ctgggtcatc acattaccgg tctgatggcg
    10681 aaccataatc cgctggccca tgaactgatt gccgcgtctg aacaatccgg tgaccgcgca
    10741 tggcgcttac cgctgggtga cgagtatcag gaacagctgg agtccaattt tgccgatatg
    10801 gcgaacattg gcggtcgtcc tggtggggcg attaccgcag gttgcttcct gtcgcgcttt
    10861 acccgtaagt acaactgggc gcacctggat atcgccggaa ccgcctggcg ttctggtaaa
    10921 gcaaaaggcg ccaccggtcg tccggtggcg ttgctggcac agttcctgtt aaaccgcgct
    10981 gggtttaacg gcgaagagta attgcgtcag gcaaggctgt tattgccgga tgcggcgtga
    11041 acgccttatc cgacctacac agcactgaac tcgtaggcct gataagacac aacagcgtcg
    11101 catcaggcgc tgcggtgtat acctgatgcg tatttaaatc caccacaaga agccccatat
    11161 atgaaaaacg cgacgttcta ccttctggac aatgacacca ccgtcgatgg cttaagcgcc
    11221 gttgagcaac tggtgtgtga aattgccgca gaacgttggc gcagcggtaa gcgcgtgctc
    11281 atcgcctgtg aagatgaaaa gcaggcttac cggctggatg aagccctgtg ggcgcgtccg
    11341 gcagaaagct ttgttccgca taatttagcg ggagaaggac cgcgcggcgg tgcgccggtg
    11401 gagatcgcct ggccgcaaaa acgcagcagc agcccgcgcg atatattgat tagtctgcga
    11461 acaagctttg cagattttgc caccgctttc acagaagtgg tagacttcgt tccttatgaa
    11521 gattctctga aacaactggc gcgcgaacgc tataaagcct accgcgtggc tggtttcaac
    11581 ctgaatacgg caacctggaa ataatggaaa agacatataa cccacaagat atcgaacagc
    11641 cgctttacga gcactgggaa aagcagggct actttaagcc taatggcgat gaaagccagg
    11701 aaagtttctg catcatgatc ccgccgccga acgtcaccgg cagtttgcat atgggtcacg
    11761 ccttccagca aaccatcatg gataccatga tccgctatca gcgcatgcag ggcaaaaaca
    11821 ccctgtggca ggtcggtact gaccacgccg ggatcgctac ccagatggtc gttgagcgca
    11881 agattgccgc agaagaaggt aaaacccgtc acgactacgg ccgcgaagct ttcatcgaca
    11941 aaatttggga atggaaagcg gaatccggcg gcacgattac ccgtcagatg cgccgtctcg
    12001 gcaactccgt cgactgggag cgtgaacgct tcacgatgga cgaaggcctg tccaatgcgg
    12061 tgaaagaagt tttcgttcgt ctgtataaag aagacctgat ttaccgtggc aaacgcctgg
    12121 taaactggga tccgaaactg cgcaccgcta tctctgacct ggaagtggaa aaccgcgaat
    12181 cgaaaggttc gatgtggcac atccgctatc cgctggctga cggcgcgaaa accgcagacg
    12241 gtaaagatta tctggtggtt gcgactaccc gtccggaaac cctgttgggc gataccggcg
    12301 tggccgttaa cccggaagat ccgcgttaca aagacctgat tggcaaatat gtcattctac
    12361 cgctggttaa ccgtcgtatt ccgatcgttg gcgacgaaca cgccgacatg gaaaaaggca
    12421 ccggctgcgt gaaaatcact ccggcgcacg actttaacga ctatgaagtg ggtaaacgtc
    12481 acgcgctgcc gatgatcaac atcctgacct ttgacggcga tatccgtgaa agcgcccagg
    12541 tgttcgatac caaaggtaac gaatctgacg tttattccag cgaaatcccg gcagagttcc
    12601 agaaactgga gcgttttgct gcacgtaaag cagtcgttgc tgcggttgac gcgctcggcc
    12661 tgctggaaga aattaaaccg cacgacctga ccgtgcctta cggcgaccgt ggcggcgtag
    12721 ttatcgaacc gatgctcacc gaccagtggt acgtgcgtgc cgatgtactg gcgaaaccgg
    12781 cggttgaggc ggttgagaac ggcgacattc agttcgtacc gaagcagtac gaaaacatgt
    12841 acttctcctg gatgcgcgat attcaggact ggtgtatctc tcgtcagctg tggtggggtc
    12901 accgtatccc tgcatggtac gacgaagcag gtaacgttta tgttggccgc aacgaagaag
    12961 aagtgcgcaa ggaaaataac ctcggtgccg acgttgccct gcgtcaggac gaagacgttc
    13021 tcgacacctg gttctcttct gcgctgtgga ccttctctac cctaggctgg ccggaaaaca
    13081 ccgacgcact gcgccagttc cacccaacca gcgtgatggt atctggtttc gacatcattt
    13141 tcttctggat tgcccgcatg atcatgatga ccatgcactt catcaaagat gaaaatggca
    13201 aaccgcaggt gccgttccac accgtttaca tgaccggcct gattcgtgac gacgaaggcc
    13261 agaagatgtc caaatccaag ggtaacgtta ttgacccgct ggatatggtt gacggtattt
    13321 cgctgccgga actgctggag aaacgtaccg gcaatatgat gcagccgcag ctggcggaca
    13381 aaatccgtaa gcgcaccgag aaacagttcc cgaacggcat tgagccgcac ggcaccgatg
    13441 ccctgcgctt caccctggcg gcgctggctt ctaccggtcg tgacatcaac tgggatatga
    13501 aacgcctgga aggctaccgt aacttctgta acaagctgtg gaacgccagc cgctttgtgc
    13561 tgatgaacac ggaaggtcag gattgcggct tcaacggtgg tgaaatgacg ctgtcgctgg
    13621 cggaccgctg gattctggca gagttcaacc agaccatcaa agcgtaccgc gaagcgctgg
    13681 acagcttccg cttcgatatc gctgcaggca ttctgtatga gttcacctgg aaccagttct
    13741 gcgactggta tctggagctg actaagccgg taatgaacgg tggaaccgaa gccgaactgc
    13801 gcggtactcg ccatacgctg gtgactgtac tggaaggtct gctgcgcctc gcgcatccga
    13861 tcattccgtt catcaccgaa accatctggc agcgtgtgaa agtactttgc ggtatcactg
    13921 ccgacaccat catgctgcag ccgttcccgc agtacgatgc atctcaggtt gatgaagccg
    13981 cactggctga caccgagtgg ctgaaacagg cgatcgttgc ggtacgtaac atccgtgcag
    14041 aaatgaacat cgcgccgggc aaaccgctgg agctgctgct gcgtggttgc agcgcggatg
    14101 cagaacgtcg cgtaaatgaa aaccgtggct tcctgcaaac cctggcgcgt ctggaaagca
    14161 tcaccgtgct gcctgccgat gacaaaggtc cggtttccgt tacgaagatc atcgacggcg
    14221 cagagctgct gatcccgatg gctggcctca tcaacaaaga agatgagctg gcgcgtctgg
    14281 cgaaagaagt ggcgaagatc gaaggcgaaa tcagccgtat cgagaacaag ctggcgaatg
    14341 aaggctttgt cgcccgcgca ccggaagcgg tcatcgcgaa agagcgtgag aagctggaag
    14401 gctatgcaga agcgaaagcg aagctgattg aacagcaggc tgttatcgcc gcgctgtaat
    14461 caaaacacag tgatgaaaac gaaggccgga gcatgctccg gcctttttta tctcttacag
    14521 aaatggtaaa gaaggcataa ttccccgtga aatactggct aagaagcctt tatctggttg
    14581 ttcttcttta ttgattaaag ga
//
LOCUS       DADMJE010000101        14559 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.102, whole genome shotgun sequence.
ACCESSION   DADMJE010000101 DADMJE010000000
VERSION     DADMJE010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.102"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..209)
                     /locus_tag="JN001_002711"
     CDS             complement(<1..209)
                     /locus_tag="JN001_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY9053891.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(280..2394)
                     /gene="fusA"
                     /locus_tag="JN001_002712"
     CDS             complement(280..2394)
                     /gene="fusA"
                     /locus_tag="JN001_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020455498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HAY9053892.1"
                     /translation="MARTTPIARYRNIGISAHIDAGKTTTTERILFYTGVNHKIGEVH
                     DGAATMDWMEQEQERGITITSAATTAFWSGMAKQYEPHRINIIDTPGHVDFTIEVERS
                     MRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVNQIKT
                     RLGANPVPLQLAIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEW
                     HQNLIESAAEASEELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGVQ
                     AMLDAVIDYLPSPVDVPAINGILDDGKDTPAERHASDDEPFSALAFKIATDPFVGNLT
                     FFRVYSGVVNSGDTVLNSVKAARERFGRIVQMHANKREEIKEVRAGDIAAAIGLKDVT
                     TGDTLCDPDAPIILERMEFPEPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVWTD
                     EESNQTIIAGMGELHLDIIVDRMKREFNVEANVGKPQVAYRETIRQKVTDVEGKHAKQ
                     SGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPGEYIPAVDKGIQEQLKAGPL
                     AGYPVVDMGIRLHFGSYHDVDSSELAFKLAASIAFKEGFKKAKPVLLEPIMKVEVETP
                     EENTGDVIGDLSRRRGMLKGQESEVTGVKIHAEVPLSEMFGYATQLRSLTKGRASYTM
                     EFLKYDEAPSNVAQAVIEARGK"
     gene            complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="JN001_002713"
     CDS             complement(2491..2961)
                     /gene="rpsG"
                     /locus_tag="JN001_002713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006714698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HAY9053893.1"
                     /translation="MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVY
                     SALETLAQRSGKSELEAFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMR
                     WIVEAARKRGDKSMALRLANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW"
     gene            complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="JN001_002714"
     CDS             complement(3058..3432)
                     /gene="rpsL"
                     /locus_tag="JN001_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003852912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HAY9053894.1"
                     /translation="MATVNQLVRKPRARKVAKSNVPALEACPQKRGVCTRVYTTTPKK
                     PNSALRKVCRVRLTNGFEVTSYIGGEGHNLQEHSVILIRGGRVKDLPGVRYHTVRGAL
                     DCSGVKDRKQARSKYGVKRPKA"
     gene            complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="JN001_002715"
     CDS             complement(3558..3845)
                     /gene="tusB"
                     /locus_tag="JN001_002715"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusB"
                     /protein_id="HAY9053895.1"
                     /translation="MLHTLHRSPWLTDFAALLRLLSEGDELLLLQDGVTAAVDGNRYL
                     ESLRNAPIKVYALNEDLIARGLTGQISNDIIPIDYTDFVRLTVKHSSQMAW"
     gene            complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="JN001_002716"
     CDS             complement(3853..4212)
                     /gene="tusC"
                     /locus_tag="JN001_002716"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusC"
                     /protein_id="HAY9053896.1"
                     /translation="MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFFIADGV
                     FQLLSGQKPDAVLARDYIATFKLLGLYDIEQCWVCAASLRERGLDPQTPFVVEATPLE
                     ADALRRELANYDVILRF"
     gene            complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="JN001_002717"
     CDS             complement(4212..4598)
                     /gene="tusD"
                     /locus_tag="JN001_002717"
                     /EC_number="2.8.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase complex subunit TusD"
                     /protein_id="HAY9053897.1"
                     /translation="MRFAIVVTGPAYGTQQASSAFQFAQALIVEGHELSSVFFYRGGV
                     YNANQLTSPASDEFDLVRGWQQLNAQHGVALNICVAAALRRGIVDETEAGRLGLASSN
                     LQPGFTLSGLGALAEASLTCDRVVQF"
     gene            complement(4598..5320)
                     /locus_tag="JN001_002718"
     CDS             complement(4598..5320)
                     /locus_tag="JN001_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9053898.1"
                     /translation="MSRSLLTNETSELDLLDQRPFDQTDFDILKSYEAVVDGLAMLIG
                     SHCEIVLHSLQDLKCSAIRIANGEHTGRKIGSPITDLALRMLHDMTGADSSVSKCYFT
                     RAKSGVLMKSLTIAIRNREQRVIGLLCINMNLDVPFSQIMSTFVPPETPDVGSSVNFA
                     SSVEDLVTQTLEFTIEEVNADRNVSNNAKNRQIVLNLYEKGIFDIKDAINQVADRLNI
                     SKHTVYLYIRQFKSGDFQGQDK"
     gene            complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="JN001_002719"
     CDS             complement(5487..6299)
                     /gene="fkpA"
                     /locus_tag="JN001_002719"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003827768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY9053899.1"
                     /translation="MKSLFKVTLLATTMAVALHAPITFAAEAAKPATTADSKAAFKND
                     DQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADKSKLSDQEIEQTL
                     QAFEARVKSSAQAKMEKDAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEA
                     PKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLV
                     IPPELAYGKAGVPGIPPNSTLVFDVELLDVKPAPKADAKPEADAKAADSAKK"
     gene            6520..6738
                     /locus_tag="JN001_002720"
     CDS             6520..6738
                     /locus_tag="JN001_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein SlyX"
                     /protein_id="HAY9053900.1"
                     /translation="MQDLSLEARLAELESRLAFQESTIEELNVTVTAHEMEMAKLRDH
                     LRLLTEKLKASQPSNIASQAEETPPPHY"
     gene            complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="JN001_002721"
     CDS             complement(6787..7377)
                     /gene="slyD"
                     /locus_tag="JN001_002721"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HAY9053901.1"
                     /translation="MKVAKDLVVSLAYQVRTEDGVLVDESPVSAPLDYLHGHGSLISG
                     LETALEGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQ
                     GPVPVEITAVEDDHVVVDGNHMLAGQNLKFNVEVVAIREATEEELAHGHVHGAHDHHH
                     DHDHDGCCGGHGHDHGHEHGGEGCCGGKGNGGCGCH"
     gene            complement(7472..7672)
                     /locus_tag="JN001_002722"
     CDS             complement(7472..7672)
                     /locus_tag="JN001_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheV family putative metal-binding protein"
                     /protein_id="HAY9053902.1"
                     /translation="MAIRKRFIAGAKCPACQAQDSMAMWRENNIDIVECVKCGHQMRE
                     ADKEARDHVRKDEQVIGIFHPD"
     gene            complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="JN001_002723"
     CDS             complement(7682..9493)
                     /gene="kefB"
                     /locus_tag="JN001_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     protein KefB"
                     /protein_id="HAY9053903.1"
                     /translation="MEGSDFLLAGVLFLFAAVAAVPLASRLGIGAVLGYLLAGIAIGP
                     WGLGFISDVDEILHFSELGVVFLMFIIGLELNPSKLWQLRRSIFGVGAAQVLLSAALL
                     AGLLMLTDFAWQAAVVGGIGLAMSSTAMALQLMREKGMNRSESGQLGFSVLLFQDLAV
                     IPALALVPLLAGSADEHFDWMKIGMKVLAFVGMLIGGRYLLRPVFRFIAASGVREVFT
                     AATLLLVLGSALFMDALGLSMALGTFIAGVLLAESEYRHELETAIDPFKGLLLGLFFI
                     SVGMSLNLGVLYTHLLWVVISVVVLVAVKILVLYLLARLYGVRSSERMQFAGVLSQGG
                     EFAFVLFSTASSQRLFQGDQMALLLVTVTVTLSMMTTPLLMKLVDKWLSRQFNGPEEE
                     DEKPWVNDDKPQVIVVGFGRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY
                     GDATQVDLLRSAGAEAAESIVITCNEPEDTMKLVEICQQHFPHLHILARARGRVEAHE
                     LLQAGVTQFSRETFSSALELGRKTLVTLGMHPHQAQRAQLHFRRLDMRMLRELIPMHA
                     DTVQISRAREARRELEEIFQREMQQERRQLDGWDEFE"
     gene            complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="JN001_002724"
     CDS             complement(9493..10044)
                     /gene="kefG"
                     /locus_tag="JN001_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709126.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-regulated potassium-efflux system
                     ancillary protein KefG"
                     /protein_id="HAY9053904.1"
                     /translation="MSQPAKVLLLYAHPESQDSVANRVLLKPATQLSNVTVHDLYAHY
                     PDFFIDIPREQALLREHEVIVFQHPLYTYSCPALLKEWLDRVLSRGFASGPGGNQLAG
                     KYWRNVITTGEPESAYRYDALNRYPMSDVLRPFELAAGMCRMHWLSPIIIYWARRQSA
                     KELANHARAYGDWLANPLSPGGR"
     gene            10175..12088
                     /locus_tag="JN001_002725"
     CDS             10175..12088
                     /locus_tag="JN001_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HAY9053905.1"
                     /translation="MIVFSSLQIRRGVRVLLDNATATINPGQKVGLVGKNGCGKSTLL
                     ALLKNEISADGGSYTFPGSWQLAWVNQETPALSQAALEYVIDGDREYRQLEAQLHDAN
                     ERNDGHAIATIHGKLDAIDAWSIRSRAASLLHGLGFSNEQLERPVSDFSGGWRMRLNL
                     AQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSYQGTLILISHDRDFLDPIVDKIIH
                     IEQQSMFEYTGNYSSFEVQRATRLAQQQAMYESQQERVAHLQSYIDRFRAKATKAKQA
                     QSRIKMLERMELIAPAHVDNPFRFSFRAPESLPNPLLKMEKVSAGYGDRIILDSIKLN
                     LVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKGIKLGYFAQHQLEYLRADE
                     SPIQHLARLAPQELEQKLRDYLGGFGFQGDKVTEETRRFSGGEKARLVLALIVWQRPN
                     LLLLDEPTNHLDLDMRQALTEALIEFEGALVVVSHDRHLLRSTTDDLYLVHDRKVEPF
                     DGDLEDYQQWLSDVQKQENQTDEAPKENANSAQARKDQKRREAELRAQTQPLRKEIAR
                     LEKEMEKLNAQLAQAEEKLGDSELYDQSRKAELTACLQQQASAKSGLEECEMAWLEAQ
                     EQLEQMLLEGQSN"
     gene            12088..13110
                     /locus_tag="JN001_002726"
     CDS             12088..13110
                     /locus_tag="JN001_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY9053906.1"
                     /translation="MAQITTTDANEFSSSAEFTPMRGFSNCHLQTMLPRLFRRQVKFT
                     PYWQRLELPDGDFVDLAWSEAPAQARHKPRLVIFHGLEGSLNSPYAHGLVEAAQKRGW
                     LGVVMHFRGCSGEPNRMHRIYHSGETEDASWFLRWLQREFGHAPTAAVGYSLGGNMLA
                     CLLAKEGNDLPVDAAVIVSAPFMLEACTYHMEKGFSRVYQRYLLNLLKANAARKLAAY
                     PGTLPINLAQLKSVRRIREFDDLITARIHGYADAIDYYRQCSAMPMLNRIAKPTLIIH
                     AKDDPFMDHQVIPKPESLPSQVEYQLTEHGGHVGFIGGTLLHPQMWLESRIPDWLTTY
                     LEAKSC"
     gene            13104..13322
                     /locus_tag="JN001_002727"
     CDS             13104..13322
                     /locus_tag="JN001_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YheU family protein"
                     /protein_id="HAY9053907.1"
                     /translation="MLIPWQDLSPETLENLIESFVLREGTDYGEHERTLEQKVADVKR
                     QLQCGEAVLVWSELHETVNIMPRSQFRE"
     gene            13376..14245
                     /locus_tag="JN001_002728"
     CDS             13376..14245
                     /locus_tag="JN001_002728"
                     /EC_number="2.7.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribulokinase"
                     /protein_id="HAY9053908.1"
                     /translation="MSAKHPVIAVTGSSGAGTTTTSLAFRKIFAQLNLHAAEVEGDSF
                     HRYTRPEMDMAIRKARDAGRHISYFGPEANDFGLLEQTFIEYGQSGKGKSRKYLHTYD
                     EAVPWNQVPGTFTPWQPLPEPTDVLFYEGLHGGVVTPQHNVAQHVDLLVGVVPIVNLE
                     WIQKLIRDTSERGHSREAVMDSVVRSMEDYINYITPQFSRTHLNFQRVPTVDTSNPFA
                     AKGIPSLDESFVVIHFRNLEGIDFPWLLAMLQGSFISHINTLVVPGGKMGLAMELIML
                     PLVQRLMEGKKIE"
     gene            complement(14300..>14559)
                     /locus_tag="JN001_002729"
     CDS             complement(14300..>14559)
                     /locus_tag="JN001_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HAY9053909.1"
                     /translation="IDVVSILQKGRQDVVDCEVKLTSERREEAPRLFTHINLHFIVTG
                     RDLKDAAVARAVDLSAEKYCSVALMLEKAVNITHSYEVVAA"
BASE COUNT         3598 a         3970 c         3586 g         3405 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcacgagc agcaccgccg taggttttag ccagtacggt ggtgattgca
      121 gcggtcagag tagttttacc gtggtcaacg tggccgatag taccaacgtt aacgtgcggt
      181 tttgtacgtt caaatttttc tttagacacg gctatattcc ttactatagt gctctcccct
      241 tcaggagaga gcacgggact ttggtattaa cccttaggct tatttaccac gggcttcaat
      301 tacggcctga gcaacgttac tcggcgcttc atcatacttc aggaattcca tagtgtatga
      361 tgcacgacct ttggtcagag aacgcagctg agttgcgtat ccgaacattt cagacagcgg
      421 tacttcagcg tggatcttaa cgccagtaac ttcagattcc tgacctttga gcataccacg
      481 acgacggctc aagtcaccga taacgtcacc ggtgttctct tccggagttt ctacttcaac
      541 cttcatgatc ggctcaagca gaactggttt cgctttctta aagccttctt taaaggcgat
      601 agaagcagcc agtttaaacg ccagttcaga ggagtcaacg tcatggtaag aaccgaagtg
      661 cagacgaata cccatgtcta ctaccgggta gcctgccagc ggacctgctt tcagctgttc
      721 ctggatacct ttatcaacgg ccgggatgta ttcgccaggg attacaccac ctttaatgtc
      781 gttgatgaac tcgtagcctt tcgggtttga acccggctcc agcgggtaca tgtcgataac
      841 aacatgacca tactgaccac gaccaccaga ctgtttcgcg tgtttacctt caacatcggt
      901 aactttctgg cggatagttt cacggtaagc aacctgcggt ttacctacgt tcgcttcaac
      961 gttgaattca cgcttcatac ggtcaacgat gatgtcgagg tgcagttcgc ccatacccgc
     1021 gatgattgtc tggttagatt cttcgtcagt ccatacacgg aaagacgggt cttctttagc
     1081 cagacggccc agagccagac ccattttttc ctggtcagct ttggttttcg gttcaactgc
     1141 gatggagatt accggctcag ggaattccat acgttccaga atgatcggcg catccgggtc
     1201 acacagggtg tcaccagtgg ttacgtcttt cagaccgata gcagcagcga tgtcgcccgc
     1261 gcgaacttct ttgatctctt cacgtttgtt agcgtgcatc tgaacgatac gaccgaaacg
     1321 ctcacgtgca gctttcacgg agttcagtac ggtatcacca gagttaacca caccggagta
     1381 aacacggaag aaggtcaggt taccaacaaa cgggtcggta gcgattttga acgccagtgc
     1441 agagaacggc tcgtcatcac ttgcgtgacg ttcagccgga gtgtctttac cgtcgtccag
     1501 gataccgttg atcgcaggta cgtcaaccgg ggatggcagg taatcaatta ccgcatccag
     1561 catcgcctga acacctttgt tcttgaacgc agaaccacag gttaccagga tgatttcgtt
     1621 gttcagaacg cgctgacgca gagcaccttt gatttctgct tcagtcagtt cttcaccacc
     1681 caggtatttt tccatcagct cttcagaagc ttcagctgcg gattcgatca ggttctggtg
     1741 ccattcgtta gccagttcaa ccatgtctgc cgggatatct tcgtattcga aggttacgcc
     1801 ctggtcagcg tcgttccagt taatagcttt cattttcacc aggtcaacaa caccggtgaa
     1861 atgttcttca gcaccaatcg ccagctgcag cggaaccgga ttcgcgccca gacgggtttt
     1921 gatctggtta acaactttca ggaagttcgc acccatgcgg tccattttgt taacgaacgc
     1981 aatgcgcgga actttatatt tgtttgcctg acgccatacg gtttcagact gcggctgaac
     2041 accaccaact gcgcagtaaa ccattaccgc accatcgaga acacgcatgg aacgttctac
     2101 ttcgattgtg aagtcaacgt gccccggggt gtcgatgatg ttgatgcgat gcggctcata
     2161 ctgcttagcc ataccagacc agaatgcagt agtcgcagcg gaagtgatgg taataccacg
     2221 ttcctgctcc tgctccatcc agtccatggt tgcagcgccg tcatgaactt cacctatttt
     2281 atggtttaca ccggtgtaga acagaatacg ttcggtagta gtggttttac cggcgtcgat
     2341 gtgcgcactg ataccgatgt tacggtagcg tgcgatgggt gttgtacgag ccatttgttt
     2401 cctcgtttat cttttaggcg ttcaatttaa gtagcccaaa gcgggctgct tactggaagc
     2461 gcccgcctgg tgactaaaac tccgaaggga ttaccaacgg tagtgtgcga acgccttgtt
     2521 ggcttcggcc atacggtgaa cgtcttcacg tttcttaact gcagtacctt tgttttctgc
     2581 agcatcagaa agttcgttcg ccaggcgcag agccatggat ttatcaccgc gtttacgagc
     2641 agcttcaacg atccaacgca ttgccagagc attacgacga accggacgga cttcaactgg
     2701 tacctgataa gtagaaccac caacgcggcg agacttaact tctacagtcg ggcgcacgtt
     2761 ttcgagagct acttcgaatg cttccagttc agatttacca gagcgctgag ccagggtctc
     2821 cagcgcgctg tatacgatag attcagcagt agatttttta ccatctacca tcaggatatt
     2881 tacaaattta gccagcagtt ctgatccgaa cttcggatcc ggcagaattt tacgctgacc
     2941 aatgacgcga cgacgtggca tggaaatact ccgttgttaa ttcaggattg tccaaaactc
     3001 tacgagttta gtttgacatt taagttaaaa cgtttggcct tacttaacgg agaaccatta
     3061 agccttagga cgcttcacgc catacttgga acgagcctgc ttacggtctt taacgccgga
     3121 gcagtcaagc gcaccacgta cggtgtggta acgaacaccc gggaggtctt taacacgacc
     3181 gccacggatc aggatcacgg agtgctcctg caggttgtga ccttcaccac cgatgtagga
     3241 agtcacttcg aaaccgttag tcagacgaac acggcatact ttacgcagcg cggagttcgg
     3301 ttttttagga gtggtagtat atacacgagt acatacgcca cgtttttgcg ggcatgcttc
     3361 cagcgcaggc acgttgcttt tcgcaacttt gcgagcacgt ggtttgcgta ccagctggtt
     3421 aactgttgcc attaaatagc tcctggtttt agcttttgct tcgtaaacac gtaataaaac
     3481 gtcctcacac aatatgagga cgccgaattt tagggcgatg ccgaaaaggt gtcaagaaat
     3541 atacaacgat cccgccatca ccaggccatc tggctggagt gcttaaccgt aagtctgacg
     3601 aaatcagtat agtcaatggg aatgatgtcg ttcgaaattt gaccagtcaa accgcgggca
     3661 ataaggtctt cgttcagggc atagacctta atgggggcat tacgcagact ttcaaggtag
     3721 cggttaccgt caactgcggc agttacgcca tcttgcaata atagcagttc gtctccttca
     3781 ctgagcagac gcagcagcgc agcaaaatcc gtcagccagg gtgaacgatg taacgtgtgc
     3841 agcataaacg cctcaaaacc tcaaaataac atcgtagttg gcgagttcgc ggcgtaaggc
     3901 atctgcttcg agcggcgtgg cttcgacaac aaagggtgtc tgcggatcta acccgcgttc
     3961 gcgcagtgaa gccgcacaaa cccagcactg ttcaatgtcg tacagaccca acaatttaaa
     4021 agtggcaatg taatcacgcg ccagcactgc atcgggcttt tgtcctgaca gcagctgaaa
     4081 aacgccatca gcaataaaga agacggccag atcgtcagtt aatgcggaag ttgccagtaa
     4141 agcatctaaa ccttcccgac cagcagctgt accatgaggt gcagtagaaa aaacaaacgc
     4201 aattcgtttc atcagaactg taccaccctg tcacaggtca gcgaggcttc cgccagcgcg
     4261 ccaagtccgc ttaaggtaaa tcccggctga aggtttgacg aagccagccc cagccttcct
     4321 gcttcagttt catcgacgat accgcggcgt aacgctgccg ctacgcagat attcagcgcc
     4381 acaccatgtt gcgcattcaa ctgttgccag ccgcgcacaa ggtcaaattc gtcacttgcc
     4441 ggtgaggtca attggttagc gttatagacc cctccccgat agaaaaagac gctgcttaac
     4501 tcatggcctt ctactatcag cgcctgcgca aactgaaaag cactactcgc ctgttgcgta
     4561 ccgtatgctg gcccggtcac cacgatggca aaacgcatta cttatcttgc ccctggaaat
     4621 caccgctctt gaactggcgg atgtagagat agacagtgtg tttggagatg ttcaggcggt
     4681 cagcaacctg gttgatcgca tctttaatat cgaagatccc tttctcgtag agattcagca
     4741 cgatctgacg atttttggcg ttattagaaa cattgcgatc ggcattcact tcttcgatgg
     4801 tgaactccag cgtttgggta accagatctt caacagaaga ggcaaagttg acgcttgaac
     4861 cgacatccgg ggtttctggc ggcacaaaag tgctcataat ctgcgagaag ggaacatcaa
     4921 gattcatatt gatgcacagc agaccaatta cacgctgttc gcggttacga atcgcgatag
     4981 tcagggactt cattaatacg ccgcttttgg cgcgagtaaa gtagcattta gaaacgctgc
     5041 tatccgctcc cgtcatatcg tgcagcatac gtagcgccag gtcagtaatt ggcgaaccaa
     5101 tcttccggcc tgtatgttca ccgttagcaa tgcgaatggc tgaacatttt agatcctgca
     5161 aagagtgcaa aacgatttca cagtgggagc caataagcat cgctaacccg tccaccaccg
     5221 cttcgtagga tttcagaata tcaaaatcgg tctggtcgaa aggacgttga tccagtaaat
     5281 ccaactcact ggtttcgttg gttaaaagcg acctggacat gaaaaaaaac actccttttc
     5341 aggagcctgt cgttaacttt tcagggcagg ctcattaatg atgcgggtaa ctaaattaat
     5401 acagcggagg ttccgctttc cagcactaat tatatccggc ctgtaataaa aaaaccgccg
     5461 cctggtcagg cggcggttct taatgcttat tttttagcag aatctgcggc tttcgcatca
     5521 gcttccggct ttgcatcagc cttcggtgct ggtttcacat ccagcagctc tacgtcaaac
     5581 accagggtag aattcggtgg gatccccgga acacccgctt tgccgtaagc cagttctggt
     5641 ggaataacca gtttgatctt accgcctttc ttgatgttct tcagaccttc tgtccaaccc
     5701 gggataacac cgtccagacg gaaagaaagc ggttcaccac gggtgtaaga gttgtcgaac
     5761 tctttaccgt cgatcagcgt acctttgtag ttcactacaa cagtatcgct gtctttcggt
     5821 gcttcgcctt taccggcttc tactacctga taaaccagac cagttgaaga ggttttcaca
     5881 cctttctctt tggcaaattt ctcgcggtac tctttacctt ttgcttcgtt atcagccgcg
     5941 tctttttcca tcttcgcctg agcagaagac ttcacgcgag cttcgaatgc ttgcagagtc
     6001 tgttcgatct cttggtcgga gagtttgctc ttatcagcaa atgcatcctg aacaccagcg
     6061 atcagctgat ctttatccag tttgatgccc agtttttctt gttctttaag agagttttcc
     6121 atgtaacgac ccagcgaagc acccagtgca taagctgatt tctgatcgtc atttttgaac
     6181 gctgctttgc tgtcagcagt tgtagcaggt tttgcagctt cagcagcaaa agtgattggt
     6241 gcatgcaggg caacggccat tgtggtcgcc agcagcgtta ctttaaacag tgatttcatc
     6301 catatctcca ggatcggggc atctcacccc agggttaact attatcagaa gggtactata
     6361 aagcgttgtc gaacaaatct acatacagac acgccctatt atcatctatt ttcagactct
     6421 ttttgtttaa attagtttcg atgaccgcga aatgagtgct gtctcgggca gcaaagttaa
     6481 gtagaatccg cggcaaccat tcgacaaaag aggtgaatca tgcaggattt atcattggaa
     6541 gcacgcctgg cagagctgga gagccgactg gcttttcagg aaagcaccat tgaagaactg
     6601 aacgtcacgg tgaccgctca tgaaatggag atggcgaaac tgcgcgatca tctgcgtctg
     6661 ctgaccgaga agttaaaagc cagccagccg tcgaacatcg cgtcgcaggc tgaagaaacg
     6721 ccaccgccac attattgagg cgtaaaaaaa gcggggattc cccgcttttt tgtcaccttt
     6781 tcggtattag tggcaaccac aaccgccgtt gcctttaccg ccacagcagc cttcgccacc
     6841 gtgttcatga ccgtgatcgt ggccatgacc gccgcagcaa ccgtcgtggt cgtgatcgtg
     6901 gtgatgatcg tgcgcgccgt gaacgtgacc atgagccagt tcttcttcgg tcgcttcacg
     6961 aatcgccaca acctcaacgt tgaatttcag gttctgaccg gccagcatgt ggttaccatc
     7021 aaccactacg tgatcgtctt caaccgcagt gatttcaacc ggtaccggcc cctggtcggt
     7081 ttcagccagg aaacgcatac ctacctgcag ttcatcaacg cccataaata cgtctttagg
     7141 aacacgttgc accaggtttt cgtcgtactg accgtaagcg tcgttcgcgc caacagcgac
     7201 atcaaatttg tcgccaactt catgaccttc cagcgccgtt tccaggccag agatcaggga
     7261 accgtgacca tgcaggtagt ccagcggcgc actcaccgga gactcatcaa ccaacacacc
     7321 gtcttctgta cgtacctgat aggccaggct gaccaccagg tcttttgcta ctttcatgat
     7381 atctcctgag catgggaaga atagtggcgc agattgtagc ggaattctgc agccgtgtac
     7441 tcactagctt aaaaaaactc ggcgcatatc gctagtccgg atgaaaaatc ccgatcactt
     7501 gctcatcttt gcgaacgtga tcgcgggctt ctttgtctgc ttctcgcatc tgatgtccgc
     7561 acttaacgca ttcaacaata tcaatattat tttcgcgcca catcgccatt gaatcctgtg
     7621 cctgacaggc cgggcatttt gcgcccgcaa taaaacgttt tcggattgcc atctttaccc
     7681 tctactcaaa ttcatcccag ccgtccagct ggcgtcgttc ttgttgcatt tcacgctgga
     7741 aaatctcttc cagttcgcgt cgggcttccc tggcgcgaga aatttgtaca gtatcggcat
     7801 gcattgggat gagctctcgc agcatccgca tatccaggcg gcgaaaatgc agttgcgccc
     7861 gctgcgcctg atgcggatgc atcccaagcg tgaccaaagt cttgcgcccc agctctaacg
     7921 cactggagaa tgtttcacgg gaaaactgcg tcacccctgc ctgtaataac tcatgcgctt
     7981 ccacacgtcc gcgcgctcgc gcaagaatat gcaaatgcgg aaagtgctgc tggcatattt
     8041 ccaccagctt catggtgtct tccggctcgt tacaggtaat gacgatagac tcagcggcct
     8101 ctgcacccgc agaacgtaat agatcgacct gcgtggcgtc gccgtaataa actttgtagc
     8161 catatttacg catcaggtta acggcgctga tatcccgctc cagcacggta atgcgcattt
     8221 tatttgccat cagcaaacga ccaatcacct gaccaaaacg cccgaagccc acgacaatga
     8281 cctggggttt atcatcgttg acccacggtt tttcgtcttc ttcttccggt ccgttaaact
     8341 ggcgggataa ccatttatcc accagcttca tcagcaacgg cgtggtcatc atggaaagcg
     8401 tcaccgtcac cgtcaccagc aacagcgcca tctggtcgcc ctggaataaa cgttgtgaag
     8461 aagcggtaga aaagaggaca aaggcaaact caccgccctg actcaacacg ccagcaaact
     8521 gcatccgctc tgagctacgc acgccataca atcgcgccag cagatacagc acgagaattt
     8581 tcaccgccac cagcacaacc acgcttatca ctacccacaa cagatgggta taaagcaccc
     8641 cgaggttgag cgacatgccg acagagataa agaacaaacc gagcagcaag cctttgaagg
     8701 gatcgatagc cgtttccagt tcatggcgat attcactttc cgccagcagc acgcccgcaa
     8761 taaatgtacc gagcgccatc gacagcccca gcgcatccat aaacaatgcg gaacccaaca
     8821 ccagcagcag cgtcgcggcg gtgaacactt cccgcacgcc agaagctgca ataaagcgga
     8881 ataccggacg cagtaaatag cgcccaccaa tcagcatgcc gacaaacgcc agcaccttca
     8941 tgccgatctt catccagtcg aaatgttcgt ctgccgaccc cgccaacaac ggcactaacg
     9001 ccagtgctgg gatcactgcc agatcctgaa acagcagaac cgaaaacccg agctggccgg
     9061 attcgctgcg attcatccct ttctcacgca tcaattgcaa cgccattgca gttgaagaca
     9121 tcgcaaggcc aatgccaccg accaccgccg cctgccaggc gaaatccgtc agcatcaata
     9181 atcccgccag caacgccgcg cttaacagca cctgtgccgc gcctacgcca aaaatcgaac
     9241 gccgcagttg ccaaagtttg gagggattca actcaaggcc gatgataaac atcaggaata
     9301 ccacgccgag ttccgaaaag tggaggatct catcgacgtc gctaataaac cccagccccc
     9361 acgggccaat tgcaatccct gccagcaaat atcccaacac agcgccaatc cccagccgcg
     9421 atgccaacgg caccgcagcc accgccgcga agagaaacag cactcctgcg agtaaaaaat
     9481 cggaaccttc catcagcggc ctcctggaga cagcggattt gccagccagt caccgtaggc
     9541 tctggcgtgg ttcgccagct cctttgcgct ttgccgtctc gcccagtaaa taatgatggg
     9601 acttaaccaa tgcatccggc acatgcccgc cgccagttca aaggggcgca gcacatcgct
     9661 catcgggtag cgattcagcg cgtcataacg gtaagcactt tccggctcgc cggtggtaat
     9721 cacgttacgc cagtactttc ccgccagttg gtttcctccc ggcccgctgg caaaaccacg
     9781 acttaatacc cggtccagcc actctttcag tagcgccggg cagctatagg tataaagagg
     9841 atgctgaaag acaatcacct cgtgctcgcg cagtaatgcc tgctcacggg ggatatcaat
     9901 aaaaaaatcg ggatagtgcg cgtaaaggtc gtgcacggta acattgctga gctgcgtggc
     9961 cggtttaagc agtacccggt ttgccaccga gtcctgagat tccggatggg catacagcag
    10021 caaaactttc gctggctgag acatcatccc cctcccggta tggtttttgt gtatagtcgc
    10081 tgttttgggc taccattgcg cccggtgcgg cagctcgccc atacattaca ttatcataat
    10141 gataagttaa catagtctga acatacggcg ccttatgatt gttttctcct cgttacaaat
    10201 tcgtcgcggc gtgcgcgtcc tgctggataa tgccaccgcc accatcaacc ctgggcagaa
    10261 agtcggcctg gtgggtaaaa acggctgtgg taaatctacc ctgctggcat tgctgaaaaa
    10321 tgaaatcagc gccgacggcg gcagctacac ctttccggga agctggcaac tggcgtgggt
    10381 gaatcaggaa acgccggcgt tatcgcaagc ggcgctggaa tatgtcattg acggcgaccg
    10441 tgaatatcgt caactggaag cgcagctgca cgacgccaac gaacgtaacg acgggcacgc
    10501 cattgcgacc attcatggca agctggatgc tattgacgca tggagtattc gctcccgtgc
    10561 cgccagcctg ctgcacggcc tcggtttcag caatgaacaa ctggagcgcc cggtaagtga
    10621 tttctccggt ggctggcgta tgcgtcttaa ccttgcccag gcgctgattt gccgttcaga
    10681 cttgctgctg ctcgacgaac cgactaacca cctcgatctc gatgccgtta tctggctgga
    10741 aaaatggttg aagagctatc aaggcacgct gatcctgatc tctcacgacc gcgacttcct
    10801 cgatccgatc gttgataaaa ttattcatat cgaacaacaa agcatgttcg agtacaccgg
    10861 caactacagt tcgtttgaag tacagcgcgc cacccgtctg gcgcaacaac aagcgatgta
    10921 tgaaagccag caggaacgcg tggcacatct gcaaagttat atcgaccgtt tccgtgccaa
    10981 agccaccaaa gcgaagcaag cccagagccg cattaagatg cttgagcgta tggagctgat
    11041 tgcccccgcg cacgtcgaca acccgttccg ctttagcttc cgcgcgccgg aaagcctgcc
    11101 aaatccgtta ctgaagatgg aaaaagtcag cgcgggctat ggcgatcgca ttattctcga
    11161 ctcgattaaa ctgaacctgg tgcccggctc gcgcattggt ctgttaggcc gcaacggcgc
    11221 gggtaaatcg acattaatca aactgttagc cggtgaactt gcgccagtca gcggtgaaat
    11281 tggtctggcg aaagggatca agctcggcta cttcgcccag catcaacttg aatacctgcg
    11341 cgccgacgaa tcacctattc aacatctggc acgtttagcg ccgcaggagc tggaacaaaa
    11401 actgcgtgac tacctcggcg gctttggttt ccagggcgat aaagtaaccg aagaaacgcg
    11461 ccgcttctcc ggtggggaaa aagcccgcct ggtgctggca ttaattgtct ggcagcgtcc
    11521 gaatctgctg ctgctcgacg aaccgactaa ccaccttgac ctcgacatgc gtcaggcact
    11581 caccgaagca ttaatcgagt ttgaaggcgc gctggttgtc gtttcgcacg accgtcattt
    11641 gctgcgttcc accactgacg atctctacct ggttcacgat cgtaaagtcg aaccgttcga
    11701 cggcgatctg gaagattatc aacagtggtt gagcgacgta caaaagcagg aaaaccagac
    11761 cgacgaagcg ccaaaagaga acgcgaacag cgcccaggca cgtaaagatc agaagcgtcg
    11821 ggaagcggag ctgcgtgcgc aaacccagcc gctgcgtaaa gagattgccc gtctggaaaa
    11881 agagatggag aagctgaacg cgcaactggc gcaggcggaa gagaaactcg gcgacagcga
    11941 actgtatgac cagagccgta aagcggagtt gaccgcctgc ctgcaacagc aagccagcgc
    12001 caaatccggc ctggaagagt gcgaaatggc gtggctggaa gcccaggagc agcttgagca
    12061 gatgctgctg gaaggccaaa gcaactgatg gcgcagataa cgacgaccga tgccaatgaa
    12121 ttcagcagca gtgctgaatt cacccctatg cgcggcttta gcaattgtca tctacaaact
    12181 atgctgccgc gtttgtttcg tcgtcaggtg aaattcaccc cgtactggca gcggctggag
    12241 ttgcccgacg gcgattttgt cgatctcgcg tggagtgaag cccctgcaca ggctcggcat
    12301 aaaccgcgtt tagtgatatt tcacgggctg gaaggcagtc tcaatagccc ttacgcccac
    12361 ggtctggttg aggcggcgca aaagcgcggc tggctgggcg tggtgatgca ttttcgcgga
    12421 tgcagcggtg aaccaaaccg tatgcaccgc atttaccatt cgggcgaaac cgaagacgcc
    12481 agttggtttt tacgctggct gcaacgcgaa tttggtcatg cgccaacggc tgccgtcggc
    12541 tattcgctcg gcggtaatat gctggcctgt ttgctggcaa aggaaggcaa tgatctcccg
    12601 gttgatgcgg cggtgattgt ctctgcgccg tttatgctgg aagcctgtac ctatcatatg
    12661 gaaaagggct tttcccgcgt ttatcagcgt tacttgctga acctgttaaa agccaatgcc
    12721 gcgcgcaagc tggcagccta ccccggaacg ctgccgatta atctcgcgca gttaaaatcg
    12781 gtacgtcgca tccgtgaatt tgacgatcta atcaccgcca gaattcacgg ctacgccgac
    12841 gctatcgact attatcgtca gtgtagcgcc atgccgatgc tgaaccggat cgccaaaccg
    12901 acgctgatta ttcacgccaa agacgatccg tttatggatc atcaggtgat cccgaaaccg
    12961 gaaagtctcc cctcgcaggt ggagtatcaa ctgactgaac atggcggtca tgttggcttt
    13021 attggcggta cattacttca tccgcaaatg tggctggagt cacgcattcc tgactggtta
    13081 acaacgtatc tggaggcgaa atcatgttga ttccgtggca agacctctcc cccgaaacgc
    13141 tggaaaattt aattgaaagc tttgtgttac gtgaaggcac cgattatggt gaacatgagc
    13201 gtacacttga acagaaagtc gccgacgtca aacgccagct acagtgcgga gaagcggtgc
    13261 tggtatggtc ggagctgcac gaaacggtca atattatgcc gcgcagtcag tttcgcgaat
    13321 aacctgcaac cgtcggcgga cgagataata atgatagcta agtcatggag ttactatgtc
    13381 tgccaaacat ccggtcattg cggtaacagg atccagcggc gcggggacca ccaccaccag
    13441 cctcgcgttt cgtaaaatat tcgcgcagtt aaatctgcat gcagctgagg tggaaggcga
    13501 cagttttcac cgttacaccc gcccggaaat ggacatggcg atccgcaaag cgcgcgacgc
    13561 cgggcggcat atcagctact tcggccccga agcgaacgac ttcggcctgc tggaacaaac
    13621 cttcattgaa tacggtcaga gcggcaaagg gaaatctcgc aaatatctgc atacctacga
    13681 cgaagccgta ccgtggaatc aggtaccggg aacattcacc ccctggcaac ctttaccaga
    13741 acccactgat gtactgtttt atgaaggttt acacggcggc gtagtcacgc cacagcataa
    13801 cgttgcgcag catgtggact tactggtcgg cgtagtgcct atcgttaacc ttgagtggat
    13861 tcaaaaactg atccgcgaca ccagcgagcg cgggcactca cgagaagcag tgatggactc
    13921 agtagtgcgt tcaatggaag actatatcaa ctacatcaca ccgcagtttt cccgcaccca
    13981 tcttaacttc cagcgcgttc ccaccgtcga cacttcaaac ccgttcgcgg caaaaggtat
    14041 cccgtcgctg gatgaaagct ttgtggtgat ccattttcgt aatctggaag ggatcgattt
    14101 cccctggctg ctggcgatgt tgcaaggctc attcatttcc cacatcaata cgttagtggt
    14161 accgggcggc aaaatgggtc tggcaatgga attaattatg ctgccgctgg tgcaacgatt
    14221 gatggaagga aagaaaatcg agtaactctg ctattacgcc ggataaaata ctatccggct
    14281 tcacaacggg atagttaaat cacgcggcaa ccacttcata cgagtgagta atattcaccg
    14341 ctttttccag catcaacgcc actgaacaat atttctcggc agagagatca accgcacgcg
    14401 caaccgctgc gtctttcagg tcgcgaccgg tgacgataaa atgcagatta atgtgcgtaa
    14461 acaggcgtgg tgcctcttcg cggcgttcag aggtcaattt tacttcacaa tcgaccacat
    14521 cctgacgccc tttttgcagg atcgaaacca catcgatgg
//
LOCUS       DADMJE010000102        14551 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.103, whole genome shotgun sequence.
ACCESSION   DADMJE010000102 DADMJE010000000
VERSION     DADMJE010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14551
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.103"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1270)
                     /locus_tag="JN001_002730"
     CDS             complement(<1..1270)
                     /locus_tag="JN001_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000108506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053910.1"
                     /translation="MSTTTRKFKTIITDTGAKKLAQVAAPDGKPVRLTHMAVGDGGGT
                     LPTPDSKQTRLVHEVWRHTVNRVILDATHQNRIIAELVIPPETGGFWIREIGVFDEHG
                     DLIAVGNTAESYKPAVAEGSGRAQTFRTILTVSSTATVALTVDNTMVMATVDYVDDKL
                     KEHEQSRRHPDASLTAKGFVQLSSATNSVSETQAATPKAVKAAYDLANGKYTAQDAST
                     TRKGLVQLSSATNSTSETQAATPKAVKAAYDLANAKYTAQDATTAQKGIVQLSSATNS
                     TSETLAATSKAVKAVMDETNKKAPLNSPALTGTPTTPAARQGTNNTQIASTAFVMAAI
                     AALVDSSPDALNTLNELAAALGNAPNFATTMTNALAGKQPKDATLTALAGLATAADRF
                     PYFTGNDVASLATLTKVGRDILAKSTVAAVI"
     gene            complement(1273..1803)
                     /locus_tag="JN001_002731"
     CDS             complement(1273..1803)
                     /locus_tag="JN001_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000071700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein I"
                     /protein_id="HAY9053911.1"
                     /translation="MSNSLLPPSASNFMRCAEAVGTRITDIPVDLNTLWSPDTCPVHL
                     LPYLAWAFSVDRWDRNWPEETKRQVIRDAWLIHRHKGTISALRRAIEPLGYLIRVSEW
                     WEFGGEPGTFTVEVGTLDSGVTEEMYLEMERLIADARPVSRHMTGLNIIQEIPGDIFA
                     AAATYDGEVITIYPGD"
     gene            complement(1796..2692)
                     /locus_tag="JN001_002732"
     CDS             complement(1796..2692)
                     /locus_tag="JN001_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY9053912.1"
                     /translation="MPAVDLSQLPEPAIIAEPDFEAILADTKAMMIASYPAEQREAVS
                     AALELESEPLNVIAQTMSFREMLLRQRVNEGARACMLSHSAGTDLDNLAGNMNTKRLV
                     ITPATDTTDAVMESDTSLRLRAQRAYDGLSVAGPSGAYEYFARSASGLVRDARAISPS
                     PANVTVSILSTEGDGTATEALLNTVRAVLNAEDTRPVADRLTVQSARIVTWRLNAKLY
                     FYPGPESEPILAAAESSFRKWLAEQGLIGQDVALSAIAAALHVHGVQRVEIIEPTQNM
                     AISDIQAARCESFTISEGGRNE"
     gene            complement(2696..3046)
                     /locus_tag="JN001_002733"
     CDS             complement(2696..3046)
                     /locus_tag="JN001_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate assembly protein"
                     /protein_id="HAY9053913.1"
                     /translation="MTTRYTGMNPDGTGNLNDMEHLKQSVRDILTTPLASRVMRREYG
                     SLVPDLIDEPMNNTTRLQCMSAAVIALTRWEPRIALDAIDVVWKAGGRAGVTLSGTVM
                     QTMQNVELTITLRE"
     gene            complement(3043..3624)
                     /locus_tag="JN001_002734"
     CDS             complement(3043..3624)
                     /locus_tag="JN001_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage baseplate assembly protein V"
                     /protein_id="HAY9053914.1"
                     /translation="MSAELMRLLSNIIRTGIISEVDEKSWRVRVRSGELETGWLRWNT
                     SRAGAFNVWLPPSPGEQVVIACIGGNPETAMIIGSLWSDAIPAPGKSLKEIVVSAPDG
                     AVFRYDADAGALSASGMKTATLQASVSVTLDTPVVECTDLLRTATLDVTKGGKMSGNI
                     THSGGNFTSNGITVHTHKHGGVKGGSDSTGGPQ"
     gene            complement(3621..4256)
                     /locus_tag="JN001_002735"
     CDS             complement(3621..4256)
                     /locus_tag="JN001_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000356302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage virion morphogenesis protein"
                     /protein_id="HAY9053915.1"
                     /translation="MDKAFTRVDETFEAIRDSLNQQAINNIARKLAQDLRRAQQARIR
                     PQKAPDGTAWTPRRRHVTRIQERIRFIWNNEARTLKNWHHDTGKYGRTITGWDEDKNS
                     IRTFYRDDIDRFLEIRTRRINQDSTKRVPMFVKLRTARYLKARADASGVTVGYSGVAA
                     RIARVHQFGERDQVAPGIFTDYPVRELLGISQADERLIYNTVLGRIAEAVR"
     gene            complement(4249..4716)
                     /locus_tag="JN001_002736"
     CDS             complement(4249..4716)
                     /locus_tag="JN001_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053916.1"
                     /translation="MLKTDSLREAMTRSCRWCQANPEKFTIFVESGNIETTGETPSFV
                     YRYQMVMFVMDYAGELDDLTLPLLAWLSENQPQLLLNPERNQDIKFSAVINDDDSADL
                     LFTLPLRERVRITRSSQGTPQAEHLLEPKPRLPSSEGDWSHVFQDVTWGESDG"
     gene            complement(4854..5261)
                     /locus_tag="JN001_002737"
     CDS             complement(4854..5261)
                     /locus_tag="JN001_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000780564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2570 domain-containing protein"
                     /protein_id="HAY9053917.1"
                     /translation="MKLWPTLGVAFLLTAGWGTSMRLSWSLGRENARNEAQASTLKST
                     ADTLNIISAGVQDMQQVLAQLRVENQQRNQDGEVRREQLRNDIAKDECAHALPDARFT
                     DRLRRHAERATASAVSPAYTADADHTGNASPLP"
     gene            complement(5258..5650)
                     /locus_tag="JN001_002738"
     CDS             complement(5258..5650)
                     /locus_tag="JN001_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000072320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HAY9053918.1"
                     /translation="MSNTFKFSSRSEKNLQGVNPDLVKVTRRALEISEVDFGITEGLR
                     SRYRQKQLVATGKSQTMNSRHLTGHAVDVVAYIGSQMSWEWPLYEKIAAAFRQASREL
                     NIPVEWGGDWKTLKDGPHFQLPHGAYPA"
     gene            complement(5647..5970)
                     /locus_tag="JN001_002739"
     CDS             complement(5647..5970)
                     /locus_tag="JN001_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000104349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY9053919.1"
                     /translation="MSTIQTGITEQVIAWLFDHLPTVYAVGAAVSISALMSLYDGRTL
                     VQTVTGSLACGVLAMAVAGSLRFFGFPEDAVTFIGASIGFMGAEKARDKVIAAFNRRV
                     KEKDE"
     gene            complement(5973..6173)
                     /locus_tag="JN001_002740"
     CDS             complement(5973..6173)
                     /locus_tag="JN001_002740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000864894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9053920.1"
                     /translation="MKVKALEGDTVDSLCFRYYGTTQGVTEKVLDANPGLCQQVFLDA
                     GQEVEMPEPEKKKREMIQLWGE"
     gene            complement(6173..6667)
                     /locus_tag="JN001_002741"
     CDS             complement(6173..6667)
                     /locus_tag="JN001_002741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="head completion/stabilization protein"
                     /protein_id="HAY9053921.1"
                     /translation="MTIVARTEPGPAEDDITDTDDGDTRISAGAFWPDIVLRELRLAV
                     RLPGRVTTSRLLHTATGAVAHVTRELEAWQQEQQAAGHQTLADVPAPVINGESVNLWH
                     WRNAVYTATRALILERYRDADTTDKGDRRADALDIQTSDLWRDVSWAISDILCRPRIF
                     AELC"
     gene            complement(6835..7581)
                     /locus_tag="JN001_002742"
     CDS             complement(6835..7581)
                     /locus_tag="JN001_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004983471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HAY9053922.1"
                     /translation="MITPAQQHWQNVMAQRAGRANEGVDHAARTAHEEVLYRLRLAQA
                     RLKGVQARSAKAAIKKELLPDFSGWIEGTLEADGGQQDEVIATLMVWAIDCGDLPLAL
                     RIGAYVVRHNLIMPDNFGRTAATVLTEEICNPVLTQAGTDADADLSAFIEPLDTLREI
                     VTDQDMPDEVRAKLCKACAFARRGLSDADSMALSLKLLREAMHLNPNAGVKREIATLS
                     RALKKADSAAEPEDASAQQAQDESSKKQQK"
     gene            complement(7627..8499)
                     /locus_tag="JN001_002743"
     CDS             complement(7627..8499)
                     /locus_tag="JN001_002743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005136493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P2 family phage major capsid protein"
                     /protein_id="HAY9053923.1"
                     /translation="MIGVTDQKGEKILLDTTGPIARTNTSYDGTKRRNPNNVVDLKNR
                     KYQCEQVNYDTFISYPQLDAWSAHPDFQSRISAQIARQVALDRIMIGFNGTSHADESN
                     FSTNKLLQDVNVGWLEHIRTDASERVMNDVTLTSRNMDNTVAHAGKYANADALVQDAR
                     SSLLDEWHKEADDLVVIMGRNLFNSLRLPVLNSISGQNPNAELLAGQLILSSRTIGGL
                     GVFLAPFFPDATMLITSFNNLSIYWQKGSMRRLMKDEPEYNRIATYQSINDAYVVEDY
                     GKCAMVTGLKFADS"
     gene            complement(8496..8678)
                     /locus_tag="JN001_002744"
     CDS             complement(8496..8678)
                     /locus_tag="JN001_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005054714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsid protein"
                     /protein_id="HAY9053924.1"
                     /translation="MNLVMSDITRNKLGCYMAQQVSLNNIPVSALVSRFTVEPAVQQR
                     FENASKESTEFTKKIT"
     gene            complement(8702..9538)
                     /locus_tag="JN001_002745"
     CDS             complement(8702..9538)
                     /locus_tag="JN001_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001262634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GPO family capsid scaffolding protein"
                     /protein_id="HAY9053925.1"
                     /translation="MANEKKTSRKKFRVAVSGSTVDGREISPVHLREAAENFNPDVYA
                     ARVNVEHYLSPCPSSEFSAMGDVTALSTEEITEGPLAGRTALYAEIEPTERMKQLVAD
                     GKKIYSSIELHPQFSVNGRAYLVGLAMTDTPASLGTERLKFTAQQRQAVMTFNSIQGE
                     APLISEAIESEIIEMAEQRQEEGTQWFNRVMGIIGRGRKADDASFSRIQEAVEGVATS
                     QADIIDRFNVLETRHQQDRQKITSLTTELAALKEKLRTQDGDPQNRFTATGAASDQLA
                     DF"
     gene            9693..11444
                     /locus_tag="JN001_002746"
     CDS             9693..11444
                     /locus_tag="JN001_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HAY9053926.1"
                     /translation="MIQDAFVRQRARQLYWQGYPPAEISRLMGINPNTIYAWKKRDQW
                     DETPPGQRVTQSIDARLIQLTEKQNKTGGDFKEIDLLTRQLKKLHDGQPDVMAAGKKG
                     RAKKLKNHFTPEQIAALREKIISRLEWHQRGWFDSLTLCREAGIRNRMILKSRQIGAT
                     WYFAQEALLMALRDDVAQPYQRNQIFLSASRRQAFQFKSIIQKAAAEVDVELKGGDKI
                     ILSNGAELHFLGTSAASAQSYTGNFYFDEFFWVSRFAELRKVAGAMATLSGLRRTYFS
                     TPSTETHEAYAYWNGDRWNEKKASHKRQRFSVDWKTLHNGLICPDRTWRQIVTLEDVV
                     NHGWKHTDIDEIRDENTEDEFLNLYMCEFVREGESAFNLNILIGCGVDGYDDWKDWKP
                     FAPRPMGNRPVWIGYDANGSSGNGDSGAVSVVVPPSVPGGRFRTVETRRVQGLEFEEQ
                     ARVIEEFTCRYNVEHIGIDVTGGNGEAVYQIVKRFFPAAIPYTFTLSSKRSLVLKMLQ
                     IMRAGRWEYDRAERELVAAFNAVRKVKTPGGFITYETDRARGISHGDLAWATMLAVIN
                     EPIGGEGENERFTVMEF"
     gene            11444..12490
                     /locus_tag="JN001_002747"
     CDS             11444..12490
                     /locus_tag="JN001_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000087802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HAY9053927.1"
                     /translation="MSRKNKKVRMSSRIDLADALRKESSLSAFTFDGPYRLTGHDLLD
                     NMYCADNGRWYETPVDWYGLARAARQTSWHQSALYFKRNVLLGCYIPHPLLSRQDFSA
                     LALDWFVFGNAFLELRSNMLGEPLKLRHALAKYMRRGSDLESWRYVQDGKDAFQFRPG
                     KVCHLMNPDINQEIYGMPEYLGALLSASLSHSADMFRKLYYDNGSHAGCIIYIGAAQV
                     NRESMDSLKETLQGARGGGAFKNVLIHAPNGGKEGVQILPFQQITAKDEFMNVKAASR
                     DDVLAAHRVPPQLMGAMPGEKSAFGDVEKAARVYAINELMPVMEAMKHINDWLGEEVI
                     RFNPYALLDIQPTS"
     gene            complement(12981..13571)
                     /locus_tag="JN001_002748"
     CDS             complement(12981..13571)
                     /locus_tag="JN001_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001289969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY9053928.1"
                     /translation="MSEINYQALRERYSPVPVPKCPICGEEMSIQRISGAQVVYACSG
                     YGDDGDFKIGRTLADEHYEKSRVTVLDVGDPEVLALLDWLETKDNRIAELEKIATDYA
                     LKFQKAQDALKHATLLHSRTAQQTNNFAVSLPDISEYFINDVFQPLRYERDVERAIIK
                     AGGKALWQEKHEDRTHQSCDVNCGWFSPLTTDKNNT"
     gene            complement(13635..13946)
                     /locus_tag="JN001_002749"
     CDS             complement(13635..13946)
                     /locus_tag="JN001_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012907691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein"
                     /protein_id="HAY9053929.1"
                     /translation="MTTPTRRISFYLKPTAVKNEGEACAWLDSLTPEARKSGQRVAFL
                     AGLALLKMNPAEAYRLAAWAGDEALSVTQTRTERPASQPVSTAQITSQMAGNIRALFP
                     E"
     gene            complement(13951..>14551)
                     /locus_tag="JN001_002750"
     CDS             complement(13951..>14551)
                     /locus_tag="JN001_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="stability/partitioning protein"
                     /protein_id="HAY9053930.1"
                     /translation="KKANVMRPVEYQNGEAFTIRNVQVMPESIPAGFKALADMSPFES
                     LLIVDLGGTTLDVAKVQGQLAGISQVFCDPHVGVSLMADAVLSVMATNGMRTSHHIAN
                     TIIEHRHDEAWLRQHIHNDAHYASLMAVIREKEETLKQRVIRALAVFSGYGRVMVVGG
                     GAEIVAPAIREACGVNATFIADGVPQFALVNGLYAMDKE"
BASE COUNT         2955 a         4054 c         4010 g         3532 t
ORIGIN      
        1 cgataacggc agcaacggtc gatttcgcaa gaatatcccg cccgactttt gtcagggttg
       61 ccaggctggc gacatcattc cccgtaaaat acggaaacct gtctgccgca gtagcaagcc
      121 cggccagcgc cgtcagggtg gcatctttcg gttgcttacc cgcaagcgcg ttagtcatgg
      181 tggtcgcaaa attcggggcg tttcccagcg ccgccgctaa ctcgttcagc gtattcagtg
      241 cgtcaggtga cgaatctaca agggcggcaa tcgcagccat aacgaaagcc gtgcttgcga
      301 tttgggtatt attcgttccc tgtcgcgcag ctggcgttgt tggcgttccg gtcagcgcag
      361 gactgtttaa gggcgctttc ttgttcgttt catccattac cgccttaacc gctttcgatg
      421 tcgcggccag tgtttcagac gtgctgttgg tggcactact gagctggact atcccttttt
      481 gtgccgtcgt ggcgtcctga gcggtatatt ttgcgttagc aaggtcatac gcggccttta
      541 ctgctttcgg cgttgcagcc tgcgtttcag acgtgctgtt ggtggcgcta ctgagctgga
      601 caaggccttt tcgcgtcgtg ctggcatcct gcgcagtata tttaccgtta gcaagatcat
      661 acgcggcctt tactgctttc ggcgttgcag cctgcgtttc agacacgctg ttagtggcgc
      721 tactgagttg aacaaagcct tttgcggtca gcgaggcgtc cgggtgacgt cgtgactgtt
      781 catgctcttt cagtttgtca tccacgtaat ccactgtggc catcaccatg gtgttgtcca
      841 cggtaagcgc cacggtggca gtgctggata cggtcagaat ggtgcgaaat gtttgtgcac
      901 gaccggaccc ttcggcaacg gctggcttgt aactttcggc agtatttccc accgcgatta
      961 aatcgccgtg ctcatcaaat acaccaattt cccggatcca gaatccgccc gtttcaggag
     1021 gaataaccag ctccgcaata atgcggttct gatgtgttgc gtccaggatg acgcgattaa
     1081 cagtatgtcg ccacacctca tgcaccagac gggtctgctt actgtctggt gtgggcaacg
     1141 tgccgccacc gtcgcccacg gccatatgag tcaggcggac aggcttacca tctggcgcgg
     1201 ctacctgagc taattttttt gcacccgtat cggtgataat ggttttaaat tttcgtgttg
     1261 tggtactcat gcttaatcgc ctggataaat ggtaataact tcaccgtcat aagttgccgc
     1321 cgctgcgaaa atatcccccg gaatttcctg aatgatattc agccctgtca tgtggcggct
     1381 gaccgggcgg gcatcagcaa tcaaccgctc catttccaga tacatttcct ccgtcacgcc
     1441 actgtccagc gtgccgactt caacggtaaa tgttcccggt tctccgccga actcccacca
     1501 ctcagacacg cgaatgaggt atcccagcgg ctcaatggcc cggcgcagtg cgctgatggt
     1561 ccctttgtgt cggtgtatca gccatgcatc acgaataacc tgtcgctttg tctcttccgg
     1621 ccagttgcga tcccagcggt caacggaaaa cgcccaggcg agataaggca gcagatgcac
     1681 cgggcaggtg tccggcgacc acagcgtgtt gaggtctacc ggaatgtctg taatgcgtgt
     1741 tccgacggct tcggcacaac gcatgaaatt gctggctgat ggtggtaaca acgaattact
     1801 cattgcgtcc accttcgctg atggtgaatg actcacagcg cgccgcctgt atgtcgctga
     1861 tggccatatt ctgtgtgggt tcgattatct ccacgcgttg cacaccgtgc acatgcagtg
     1921 cggcagcaat ggcggacaac gccacgtcct gaccgataag cccctgctca gccagccact
     1981 tcctgaacga cgattcagcc gcggccagaa taggttcgga ttccgggccg gggtaaaagt
     2041 acagttttgc attcagccgc catgtcacga ttctggcact ctgtacggtc aggcggtcgg
     2101 ccaccgggcg ggtatcctct gcattcagaa cggcgcgaac ggtattaagc aacgcctccg
     2161 ttgctgtgcc gtcgccctca gtggacagga tggaaaccgt cacgttggcc ggagacgggc
     2221 tgatggcccg cgcatcgcgt accagaccgc tggcgctgcg tgcaaaatac tcgtatgcac
     2281 ctgacgggcc agcaacactc agaccgtcat atgcccgttg cgcccgtagt ctcagcgagg
     2341 tgtcactttc catcactgca tcggtggtat ccgttgccgg agtgataacc aggcgctttg
     2401 tgttcatatt gcccgcgagg ttgtccaggt ctgtcccggc gctgtggctt agcatgcagg
     2461 cgcgtgcacc ctcattgacc cgctggcgta acagcatttc acgaaacgac atggtttgag
     2521 cgataacgtt aaggggttcc gattccagct ccagcgcggc ggaaacggct tcacgctgtt
     2581 cggcgggata ggacgcaatc atcatggcct ttgtgtcagc cagaattgcc tcaaagtcag
     2641 gctccgcgat gatggcgggt tccggtaact gtgaaaggtc aacggcaggc atgatttact
     2701 ccctcagcgt gatggttaat tcaacattct gcatggtctg catgacagtg cccgacagcg
     2761 tcaccccggc gcggcctcct gccttccaga caacgtcgat agcgtccagg gcaatgcggg
     2821 gttcccatcg tgtcagcgca atcacggcag cactcatgca ttgcagacgc gtggtgttat
     2881 tcatgggttc gtcaatcaaa tcaggcacaa ggctgccata ttcccgtcgc ataacccggc
     2941 ttgccagcgg ggtggtcagg atgtccctga ctgactgttt caggtgctcc atatcgttca
     3001 ggtttcccgt tccgtccggg ttcattcctg tgtagcgggt tgtcactgcg ggcctcctgt
     3061 cgaatcgctg ccacctttaa cgccaccgtg tttatgcgta tgcactgtga tgccgtttga
     3121 ggtgaaattg ccgccgctgt gcgtgatatt gccgctcatc tttccccctt ttgtgacgtc
     3181 aagcgtcgcc gttctcagaa ggtctgtgca ttccacgacg ggcgtatcca gtgtcacgct
     3241 gacggatgcc tgcagggtgg ctgttttcat gccgctggcg ctcagtgcgc ctgcgtccgc
     3301 gtcgtagcgg aacaccgcgc catccggcgc gctgaccacg atttctttca ggcttttgcc
     3361 gggggccgga atggcatcac tccacaggct gccaattatc atggcggttt ccgggttgcc
     3421 gccaatgcag gcaattacca cctgttcgcc tggtgatggc ggcagccaca cattgaaggc
     3481 tcccgcgcga gaggtgttcc agcgcagcca acctgtttcc agttcgccgc tgcgaacgcg
     3541 cacgcgccag gacttctcat caacttcaga gatgatcccg gtgcggatga tattgctcag
     3601 tagccgcatg agttctgcgc tcaccgtaca gcctccgcaa tccggcccag caccgtgtta
     3661 taaatcaggc gctcatctgc ctggctgata cccagcagct cacgtaccgg gtaatcggtg
     3721 aaaatgcccg gcgcaacctg atcgcgctca ccgaactgat gaacgcgtgc aatacgtgcg
     3781 gccacgccgc tgtaacccac cgtcacaccg gaagcatctg cacgggcttt caggtagcgg
     3841 gcggtgcgca gttttacgaa catggggacg cgctttgtgc tgtcctggtt gatgcgccgg
     3901 gtgcgtattt ccagaaagcg gtcgatgtca tcccggtaaa acgtgcggat gctgttttta
     3961 tcctcatccc acccggtgat ggttcgcccg tatttccccg tgtcgtgatg ccagtttttc
     4021 agcgtgcgtg cttcgttatt ccagataaag cgaatgcgct cctgtatccg ggttacgtgg
     4081 cgtctgcgtg gtgtccatgc ggtcccgtcc ggcgctttct gtggccggat acgtgcctgc
     4141 tgggcgcggc gtaaatcctg tgccagcttt ctggcgatgt tattgatggc ctgctgattc
     4201 aggctgtcgc ggatggcctc aaaggtttca tccacgcgag tgaatgcctt atccatcgct
     4261 ttcaccccac gtcacatcct ggaatacatg cgaccagtcg ccttcggaag atggcaggcg
     4321 gggttttggc tccagcaggt gttctgcctg cggtgtgccc tgactgctgc gcgtgatgcg
     4381 aacgcgttcc cgcaggggga gcgtaaacag gagatcggcg ctgtcatcgt cattgataac
     4441 ggcggaaaat ttgatgtcct gattacgctc agggttgagc aacaactgtg gctgattttc
     4501 ggataaccac gccagcagcg gcagcgtgag gtcgtccagc tccccggcgt aatccatgac
     4561 aaacatcacc atctgatagc ggtaaacaaa cgatggggtt tctccggtcg tttcaatgtt
     4621 gccgctctcc acgaaaatgg tgaatttttc cgggttagcc tgacaccatc ggcatgaacg
     4681 ggtcatggct tcacgcaggg aatcagtttt cagcatggtt gttatcctcg ttgttcagtc
     4741 gttgcagcct gcgctgttcc agtaattcaa tggcccgttt atccgcgtta caggtttcca
     4801 gtgcatccag aaggcggtcg ccccatatac cgagatttcc ccatgtggga gtgtcaggga
     4861 aggggggagg cgttaccggt atggtcagcg tctgcggtat aagccggact gacggcgctg
     4921 gcagtggcgc gttctgcgtg cctgcgcagc ctgtcagtaa aacgagcgtc aggcaaagcg
     4981 tgggcgcatt catcttttgc aatatcgttg cgtagctgtt cacgtcttac ctctccgtcc
     5041 tgattgcgtt gctgattttc cacgcggagt tgcgccagca cctgctgcat atcctgtacc
     5101 ccggcgctga tgatattcag ggtgtcggcg gtacttttca gggtgctggc ctgcgcttcg
     5161 tttctggcgt tctcccggcc cagcgaccac gacagacgca tggatgttcc ccatccggca
     5221 gtcagaagga aagcgacgcc aagcgtgggc cagagcttca tgccggatag gctccgtgtg
     5281 gtaactgaaa atgcggtccg tctttcaggg tcttccagtc gccgccccat tccaccggaa
     5341 tattcagttc ccggctggcc tgtctgaatg ctgctgcgat tttttcgtac agcggccatt
     5401 cccatgacat ctggctgccg atataagcca caacatccac ggcatgcccc gtaaggtggc
     5461 ggctgttcat ggtctggctc ttacccgtgg ccaccagttg cttctggcgg taacggctgc
     5521 gcaacccttc ggtgatacca aaatccactt ccgagatttc cagtgcccgt cgggtcactt
     5581 tcaccagatc aggatttaca ccctgcaaat tcttttcgct ccggctgctg aatttaaatg
     5641 tgttgctcat tcgtccttct ccttcaccct gcgattaaag gccgcaataa ccttgtcgcg
     5701 tgctttctct gcacccataa aaccgattga tgcgccgata aacgtcacgg catcttcagg
     5761 aaacccgaag aagcgcaacg acccggccac ggccatggca agaacgccgc acgccagcga
     5821 tcccgttacg gtctgaacca gtgttcgtcc gtcataaagg ctcatcagcg cggaaatgct
     5881 gaccgccgcg cctactgcat acaccgttgg caggtggtca aagagccacg caataacctg
     5941 ctctgtgatc cctgtttgaa tggtgctcac tgctactccc cccacaactg aatcatttct
     6001 cgtttcttct tctccggctc cggcatctcc acttcctgcc cggcgtccag aaatacctgc
     6061 tgacagagtc cggggttggc atccagcacc ttttcggtga cgccctgcgt cgtgccgtag
     6121 taccggaaac agagcgaatc cacggtgtcg ccttccagtg ccttcacttt catcagcaca
     6181 actccgcaaa gattcgcggg cggcacagaa tgtcagagat ggcccagctc acatcacgcc
     6241 acaaatccga tgtctgtata tccagagcgt ctgcccggcg gtcgcccttg tccgtagtgt
     6301 ctgcatcacg ataacgctcc agaatcaggg cgcgcgtggc ggtataaaca gcattgcgcc
     6361 agtgccagag attgacgctt tctccgttaa ttacgggtgc cggaacatcg gccagcgtct
     6421 gatggccagc tgcctgctgt tcctgctgcc atgcttccag ctcgcgggta acgtgtgcca
     6481 cagccccggt ggcagtatgc agcaggcggg aggtggtcac gcgccccggc agtcgtaccg
     6541 ccagacgcag ctcgcgcagc acaatatccg gccagaatgc acccgctgaa atgcgggtat
     6601 cgccatcatc ggtatcggtg atgtcgtcct ctgcgggtcc gggttcagtt ctggcaacta
     6661 tagtcatggg gttcactcct gaaaaaaaat cgggcggtgg gtgcgcggtg taaacggtca
     6721 cggagtcaaa ctggaacacc gcgcacgccg cccgctgacg gggtcagtcg ttaaccgcgc
     6781 ttcgccttct gcgtcgcggt ggtttttcgt gttgcaggct tccgcgttgt ctttttactt
     6841 ttgctgcttt ttgctgcttt cgtcctgcgc ctgctgtgcg ctggcgtctt ctggttcggc
     6901 tgcggaatcg gcttttttca gggcgcggga aagggttgca atctcgcgtt tcacacctgc
     6961 gttcgggttc aggtgcattg cttcgcgcag cagcttcagt gacagggcca tgctgtccgc
     7021 atcactcagg ccacggcggg caaaggcgca cgctttgcat aatttggcgc gcacttcgtc
     7081 cggcatgtcc tggtcggtga caatctcccg gagggtgtcc agtggttcga taaaggcgga
     7141 caaatccgcg tcggcatccg tcccggcctg cgtcagtacc ggattacaga tttcttcggt
     7201 cagtaccgtg gcagcagtac ggccaaagtt atccggcatg atgaggttgt gacggactac
     7261 atacgcgccg atacgcagcg caagcggaag atcgccacag tcaatcgccc acaccatcag
     7321 cgtggcaatc acttcatcct gctgcccgcc gtcagcctcc agcgttccct caatccagcc
     7381 ggaaaaatcc ggcaacaact cttttttgat ggcggctttc gcgcttctgg cctgtacgcc
     7441 cttaagccgg gcctgtgcca gacgcagacg atacagcacc tcttcatgcg cggtacgcgc
     7501 ggcgtggtcc acgccttcat tcgcccggcc tgcgcgctgt gccatcacgt tctgccagtg
     7561 ttgttgtgca ggagtaatca tttttgctct ccgttacagg cgggcatgat gcccgccgtg
     7621 agttgattag ctgtcggcga acttcaggcc agtaaccatc gcgcacttgc catagtcttc
     7681 aacgacataa gcgtcattga tggactggta ggtggcgatg cggttgtatt ccggctcgtc
     7741 tttcatcagg cgacgcattg aacctttctg ccagtaaatc gacaggttgt tgaacgaggt
     7801 gatcagcatc gttgcatccg ggaagaacgg cgcaaggaac acgcccagcc cgccaatggt
     7861 gcgcgatgac aggatgagct gcccggcgag taattccgca ttgggattct ggccgctgat
     7921 gctgttcagc acgggcagac gcagcgagtt aaacaggttg cgccccataa tcaccacgag
     7981 gtcgtcagct tccttgtgcc attcatccag cagggatgaa cgcgcgtcct gtaccagtgc
     8041 atcagcgttc gcatacttac ccgcgtgcgc cacggtgttg tccatgttgc gggaggtcag
     8101 cgtcacgtca ttcataacgc gttcgctggc gtcggttctg atgtgctcca gccagcccac
     8161 gttaacgtcc tgaagcagct tgttggtgct gaagttggac tcatccgcgt gagacgtgcc
     8221 gttgaaaccg atcatgatgc ggtcaagcgc cacctgtcgg gcaatctgtg cgctgatgcg
     8281 ggactgaaaa tcagggtgtg ccgaccaggc atcaagctgc ggatacgaaa taaacgtgtc
     8341 gtagttcacc tgttcacact gatatttgcg gtttttcaga tcaaccacgt tattcgggtt
     8401 acggcgtttt gtgccgtcat aactggtatt cgtgcgcgca atcggtcctg tggtatccag
     8461 gaggattttt tcgcctttct ggtcggtcac gccgatcacg ttattttttt cgtaaattcg
     8521 gtactttcct ttgaggcgtt ttcaaaacgc tgctgcaccg cgggttccac ggtaaatcgc
     8581 gacaccagtg cagataccgg gatattatta agcgacacct gctgcgccat atagcaaccc
     8641 agcttgttgc gggtaatatc tgacatcacc agattcataa aaaatttgct cctttgtcta
     8701 atcagaagtc ggccagctgg tcggaggctg cgcccgttgc ggtgaagcgg ttctgcggat
     8761 cgccgtcctg cgtgcgcagt ttttccttca gtgctgccag ctctgtggtc agtgacgtaa
     8821 ttttctggcg gtcctgctga tggcgggttt ccagcacatt aaaacggtcg ataatgtcgg
     8881 cctgtgacgt tgcgacgcct tccaccgctt cctgaatacg ggaaaaactg gcgtcatccg
     8941 ctttgcggcc acggccaata atccccatta cgcggttaaa ccactgggtg ccttcttcct
     9001 ggcgttgttc tgccatttcg atgatttcag actcgatggc ttcggagata agcggcgctt
     9061 caccctggat actgttaaac gtcatcaccg cctgacgttg ctgtgccgtg aatttcaggc
     9121 gctcagtgcc caggcttgcc ggggtgtcgg tcatcgccag cccgaccaga taggcgcgcc
     9181 cgttaacgga gaactgcggg tgcagttcga tactggaata gattttcttg ccgtccgcaa
     9241 caagctgctt catgcgctcg gtcggttcga tttctgcata cagcgcagta cgtccggcca
     9301 gcggaccttc cgtaatctct tccgtactca gtgcggtgac atcgcccatt gcggaaaatt
     9361 cgcttgacgg gcatggcgag agatagtgct caacgttcac gcgggcagcg taaacatccg
     9421 ggttgaagtt ctcggcggct tcacgcagat gcaccggact gatttcacgg ccatcaacag
     9481 ttgatccgga gacagccacg cgaaactttt tgcgggatgt ctttttttca ttagccatag
     9541 tttttgcccc tctgactggt tcttcagtca tgatggcaaa gcgtaacagg ctgatacaaa
     9601 gggcttttgt tgtaagaaaa cggccagaac agagggttaa ggagaacagt ttcgcgcgcg
     9661 ggtaatcttc ctgtaattac tcagggggag caatgattca ggacgctttt gtgcgccagc
     9721 gtgcgcggca actttactgg cagggttatc cgcccgcaga aatatcacgt ctgatgggaa
     9781 taaacccgaa cacgatttat gcgtggaaaa aacgtgacca gtgggatgaa acgccacccg
     9841 ggcagcgtgt cacgcagtcc atcgatgcgc gcctcatcca gcttactgaa aaacagaata
     9901 aaacaggcgg tgactttaag gaaatagacc tgctgacccg gcagcttaaa aagctgcatg
     9961 atggccagcc ggatgtgatg gccgcaggaa agaaaggccg ggcgaaaaaa ctcaaaaatc
    10021 atttcacgcc ggaacagatt gccgcactgc gggaaaaaat catcagcagg ctggagtggc
    10081 atcagcgggg ctggtttgac tccctgaccc tttgcaggga agccgggata cgtaacagga
    10141 tgatcctgaa atcccgacag attggggcga cctggtattt tgcacaggaa gcactgctga
    10201 tggcgctgcg tgacgatgtg gcgcaacctt accagcgtaa ccagattttt ttgtctgcgt
    10261 cgcgtcgtca ggcgttccag tttaaaagca ttattcagaa ggccgcggct gaagttgatg
    10321 tggagctgaa agggggcgat aaaatcatcc tctccaacgg cgcagagctg cattttctcg
    10381 gcacttctgc tgcgtcggca cagtcctata cgggcaattt ttattttgat gaatttttct
    10441 gggtcagtcg ctttgctgaa ctgcgcaagg tggctggcgc tatggcaacc ctcagcggac
    10501 tgcggcgcac ctacttctcc acgccatcca ccgaaacgca cgaggcatac gcctactgga
    10561 acggcgaccg ctggaacgag aaaaaggcct cgcataaacg ccagcgtttt tctgtggact
    10621 ggaaaacgct gcataacggg cttatctgcc ctgaccggac gtggcggcaa attgtcacgc
    10681 tggaagatgt ggttaatcac ggctggaaac acaccgatat cgacgaaatt cgtgatgaaa
    10741 acaccgaaga cgagttcctc aatctctata tgtgtgagtt tgtccgcgaa ggggaatcgg
    10801 catttaacct gaatatcctg attggctgcg gcgttgacgg atacgacgac tggaaagact
    10861 ggaaaccttt tgctccccgc ccgatgggga atcgtccggt atggattggg tatgacgcaa
    10921 acggcagcag tggcaacggc gacagcggcg ctgtgtccgt ggtggttcct ccgtctgttc
    10981 ctggtggccg ttttcgaacg gtggagacgc gacgcgttca ggggctggag tttgaagaac
    11041 aggccagagt cattgaagag ttcacgtgtc gctacaacgt ggaacacatc ggcattgatg
    11101 tgacgggcgg gaacggggag gctgtttatc agatagtgaa acggtttttc cctgccgcta
    11161 ttccgtacac cttcacgctg tcatcaaaac ggtcgctggt actgaaaatg ctgcaaataa
    11221 tgcgtgccgg gcggtgggaa tacgatcgcg ccgaacgcga gctggtcgcg gcctttaacg
    11281 ccgtgcgtaa ggtgaaaaca ccgggcggct ttatcactta cgaaacggac cgagcgaggg
    11341 ggatcagcca cggcgacctt gcgtgggcaa ccatgcttgc tgtcattaac gaaccgattg
    11401 gcggcgaagg agaaaacgag cgtttcacgg ttatggagtt ctgatgagca gaaaaaataa
    11461 aaaagtgcgc atgagttcac gcattgatct cgctgatgcg ctcaggaaag aatcatcgct
    11521 cagtgcattc acatttgatg gtccttatcg cctgaccggg catgacctgc tggacaatat
    11581 gtactgtgct gataacgggc ggtggtatga aaccccggtg gactggtacg gtctggcaag
    11641 agctgcccgg caaacgtcct ggcatcagtc tgcgctttat tttaagcgca atgtattgct
    11701 cggttgctac atcccgcacc cgctgctttc ccggcaggat ttctcggcgc tggcgctgga
    11761 ctggtttgtg ttcggtaacg cattccttga gcttcgaagc aatatgctcg gcgaaccgct
    11821 taaattacgg cacgccctgg cgaaatacat gcgacgcgga agcgatcttg aatcatggag
    11881 gtatgtgcag gatggcaagg atgcgtttca gtttcgccca ggcaaagtgt gtcacctgat
    11941 gaatcctgac attaaccagg aaatctacgg catgccggaa tatctcggcg cattactctc
    12001 ggccagcctg tctcattcgg cggacatgtt cagaaaactg tattacgaca acggatccca
    12061 cgccgggtgc atcatctaca tcggtgccgc gcaggtaaac cgcgaaagca tggactccct
    12121 gaaagaaacg ctacagggtg cgcgtggtgg tggtgcgttt aaaaacgtgc tcattcatgc
    12181 gcccaacggg ggcaaagagg gggtgcaaat tttgccgttc cagcagatca ccgcaaagga
    12241 tgagttcatg aatgttaagg cggcatcccg tgatgatgtg ctggctgcgc accgcgttcc
    12301 gccgcaactg atgggggcga tgccgggtga aaaaagtgcg tttggtgatg tggagaaggc
    12361 cgcgcgggtt tacgcaatta acgagctgat gcccgtcatg gaggccatga agcacatcaa
    12421 tgactggctt ggcgaagagg tgatccgctt taacccttac gcactgttag acatccagcc
    12481 cacatcctga cgcgcttcgc ttgtctgctg cttcgccggg gcataaaaaa tttatgcccc
    12541 gactctccag ctcctgtatc agtcagataa tttcacgacg ccttccagtt tatcgccacc
    12601 atcgacggtc agactcttac gcaatcccac cgcgttgact gcatgttctc gccgcctcag
    12661 tgcgattttg acggccttac ctttcacccc atcaaatcag aatccctcac gtatttttca
    12721 cgctcagcgt gagaaatacg gccattctgt cgtgtcgctg cgacatcgtt aagggaacgc
    12781 tatttacccc ctgaaacgcg ggctgttccc ccgtcacctg cgcgcagaaa aagcgcgttt
    12841 ttttgtgcac gcacggatcc ttgacggatc cagccgccac gcgggctgga agggcaaaaa
    12901 ttcgttcaaa aaaattgtgc aaatttgtgc actattgtgc agcagggcga tgtgcgatta
    12961 tcgccctggt ttgaggggga tcaggtgtta tttttatctg tcgtcagtgg gctaaaccat
    13021 ccacaattta catcgcatga ctgatgcgtt ctgtcctcgt gtttctcctg ccacaatgct
    13081 tttccgccag cctttatgat ggctctttca acatcccgct cgtatcgcaa gggctgaaat
    13141 acgtcattaa tgaaatattc gcttatgtcc ggaagcgata ctgcaaaatt atttgtttgt
    13201 tgcgccgtcc tgctatgcag caaagtggca tgctttaatg cgtcctgtgc tttctggaat
    13261 ttaagtgcat agtcagtggc gattttttcc agttcagcga ttcggttgtc tttggtttcc
    13321 agccaatcaa gtagcgccaa tacttcagga tccccgacat ccaacactgt tacgcgtgat
    13381 ttttcataat gttcgtcagc aagagttcgg ccaattttga aatctccatc atcaccataa
    13441 ccggagcagg cataaacaac ctgtgctcca gatattcgct gaattgacat ttcctcgccg
    13501 caaatagggc atttcggtac tggcacaggt gaataacgtt cacgtaatgc ctgatagttg
    13561 atttcgctca ttaagtcgtt ctccttgttt atgttctgag gtggagagca gggcgaactc
    13621 gccctgatgt tgtgttattc aggaaataac gcccggatat ttccggccat ctgactggtt
    13681 atctgtgcgg ttgatactgg ctgtgatgcg gggcgttctg tcctggtttg tgtcactgat
    13741 aacgcttcat caccagccca tgcagccagt cgataagcct ctgccggatt cattttcaga
    13801 agtgccagcc cggccagaaa agccacgcgt tggccgcttt tgcgggcttc tggtgtaagg
    13861 ctgtccagcc aggcgcatgc ttctccttcg ttcttgacgg cggtgggctt cagatagaaa
    13921 cttatccgtc tggttggagt cgtcattggt ttactccttg tccattgcgt acagcccatt
    13981 aaccagagca aactgtggca ccccgtccgc gatgaaagtc gcattaactc cgcaggcttc
    14041 gcggatagcg ggtgccacaa tctccgcccc tccaccgaca accatcaccc gcccgtaacc
    14101 cgaaaaaacc gccagcgcgc ggatcacgcg ttgtttcagt gtttcttcct tttcacgaat
    14161 taccgccatc aggctggcgt aatgcgcgtc attgtggatg tgctggcgca gccaggcttc
    14221 atcatggcga tgttcgataa tggtattggc gatgtggtga ctggtgcgca taccgttagt
    14281 ggccatcacc gacagtacgg catcggccat cagagaaacg cccacgtgtg gatcgcaaaa
    14341 cacctggctg atacctgcca gttgcccctg aacctttgcc acatccagcg tggttccgcc
    14401 caaatccaca atcagcaggg attcaaacgg actcatgtca gccagtgcct taaagccagc
    14461 cggaatggat tcaggcataa cctgtacgtt acggatagtg aatgcttcgc cgttctggta
    14521 ctccaccggg cgcatgacgt tcgctttttt g
//
LOCUS       DADMJE010000103        14502 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.104, whole genome shotgun sequence.
ACCESSION   DADMJE010000103 DADMJE010000000
VERSION     DADMJE010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14502
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.104"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..787)
                     /gene="fimH"
                     /locus_tag="JN001_002751"
     CDS             complement(<1..787)
                     /gene="fimH"
                     /locus_tag="JN001_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria D-mannose specific adhesin FimH"
                     /protein_id="HAY9053931.1"
                     /translation="MKRVITLFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVN
                     LAPVVNVGQNLVVDLSTQIFCHNDYPETITDYVTLQRGSAYGGVLSNFSGTVKYSGSS
                     YPFPTTSETPRVVYNSRTDKPWPVALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNS
                     DDFQFVWNIYANNDVVVPTGGCDVSARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYL
                     SGTTADAGNSIFTNTASFSPAQGVGVQLTRNGTIIPANNTVSLG"
     gene            complement(807..1310)
                     /gene="fimG"
                     /locus_tag="JN001_002752"
     CDS             complement(807..1310)
                     /gene="fimG"
                     /locus_tag="JN001_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimG"
                     /protein_id="HAY9053932.1"
                     /translation="MKWRKRGYLLAAILALASATIQAADVTITVNGKVVAKPCTVSTT
                     NATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYKNQG
                     TAQNIQLELQDDSGNTLNTGETKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVI
                     SITYTYS"
     gene            complement(1323..1853)
                     /gene="fimF"
                     /locus_tag="JN001_002753"
     CDS             complement(1323..1853)
                     /gene="fimF"
                     /locus_tag="JN001_002753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709916.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria minor subunit FimF"
                     /protein_id="HAY9053933.1"
                     /translation="MRNKPFYLLCAFLWLAVSRVLAADSTITIRGYVRDNGCSVAAES
                     TNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAVSAVKVGFTGVADSHNANLLA
                     LENTVSAASGLGIQLLNEQQNQIPLNAPSSAISWTTLTPGKPNTLNFYARLMATQVPV
                     TAGHINATATFTLEYQ"
     gene            complement(1863..4499)
                     /gene="fimD"
                     /locus_tag="JN001_002754"
                     /pseudo
     CDS             complement(1863..4499)
                     /gene="fimD"
                     /locus_tag="JN001_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418737.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis usher protein FimD"
     gene            complement(4566..5291)
                     /gene="fimC"
                     /locus_tag="JN001_002755"
     CDS             complement(4566..5291)
                     /gene="fimC"
                     /locus_tag="JN001_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418736.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria chaperone FimC"
                     /protein_id="HAY9053934.1"
                     /translation="MSNKNANVRKSQEITFCLLAGILMFMAMMVAGRAEAGVALGATR
                     VIYPAGQKQVQLAVTNNDENSTYLIQSWMENADGVKDGRFIVTPPLFAMKGKKENTLR
                     ILDATNNQLPQDRESLFWMNVKAIPSMDKSKLTENTLQFAIISRIKLYYRPAKLALPP
                     DQAAEKLRFRRSANSLTLINPTPYYLTVTELNAGTRVLENALVPPMGESTVKLPSDAG
                     SNITYRTINDYGALTPKMTGVME"
     gene            complement(5328..5867)
                     /locus_tag="JN001_002756"
     CDS             complement(5328..5867)
                     /locus_tag="JN001_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418735.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY9053935.1"
                     /translation="MKRKRLFLLASLLPMFALAGNKWNTTLPGGNMQFQGVIIAETCR
                     IEAGDKQMTVNMGQISSNRFHAVGEDSAPVPFVIHLRECSTVVSERVGVAFHGVADGK
                     NPDVLSVGEGPGIATNIGVALFDDEGNLVPINRPPVNWKRLYSGSTSLHFIAKYRATG
                     RWVTGGIANAQAWFSLTYQ"
     gene            complement(5932..6480)
                     /gene="fimA"
                     /locus_tag="JN001_002757"
     CDS             complement(5932..6480)
                     /gene="fimA"
                     /locus_tag="JN001_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding
                     lipoprotein/fibrin-binding adhesin FimA"
                     /protein_id="HAY9053936.1"
                     /translation="MKIKTLAIVVLSALSLSSTAALAAATTVNGGTVHFKGEVVNAAC
                     AVDAGSVDQIVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNVASKAAVAFLGTAID
                     AGHTNVLALQSSAAGSATNVGVQILDRTGAALTLDGATFSEQTTLNNGTNTIPFQARY
                     YATGVATPGAANADATFKVQYQ"
     gene            complement(6957..7553)
                     /gene="fimE"
                     /locus_tag="JN001_002758"
     CDS             complement(6957..7553)
                     /gene="fimE"
                     /locus_tag="JN001_002758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimE"
                     /protein_id="HAY9053937.1"
                     /translation="MSKRRYLTGKEVQAMMQAVCYGATGARDYCLILLAYRHGMRISE
                     LLDLHYQDLDLNEGRINIRRLKNGFSTVHPLRFDEREAVERWTLERANWKGADRTDAI
                     FISRRGSRLSRQQAYRIIRDAGIEAGTVTQTHPHMLRHACGYELAERGADTRLIQDYL
                     GHRNIRHTVRYTASNAARFAGLWERNNLINEKLKREEV"
     gene            complement(8031..8633)
                     /gene="fimB"
                     /locus_tag="JN001_002759"
     CDS             complement(8031..8633)
                     /gene="fimB"
                     /locus_tag="JN001_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbria regulatory protein FimB"
                     /protein_id="HAY9053938.1"
                     /translation="MKNKADNKKRNFLTHSEIESLLKAANTGPHAARNYCLTLLCFIH
                     GFRASEICRLRISDIDLKAKCIYIHRLKKGFSTTPPLLNKEVQALKNWLSIRTSYPHA
                     ESEWVFLSRKGNPLSRQQFYHIISTSGGNAGLSLEIHPHMLRHSCGFALANMGIDTRL
                     IQDYLGHRNIRHTVWYTASNAGRFYGIWDRARGRQRHAVL"
     gene            10089..10805
                     /gene="nanC"
                     /locus_tag="JN001_002760"
     CDS             10089..10805
                     /gene="nanC"
                     /locus_tag="JN001_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313297.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminic acid outer membrane channel
                     NanC"
                     /protein_id="HAY9053939.1"
                     /translation="MKKAKILSGVLLLCFSSPLISQAATLDVRGGYRSGSHAYETRLK
                     VSEGWQNGWWASMESNTWNTIHDNKKENAALNDVQVEVNYAIKLDDQWTVRPGMLTHF
                     SSNGTRYGPYVKLSWDATKDLNFGIRYRYDWKAYRQQDLSSDMSRDNVHRWDGYVTYH
                     INSDFTFAWQTTLYSKQNDYRYANHKKWATENAFVLQYHMTPDITPYIEYDYLDRQGV
                     YNGRDNLSENSYRIGVSFKL"
     gene            10825..11931
                     /locus_tag="JN001_002761"
     CDS             10825..11931
                     /locus_tag="JN001_002761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylneuraminate epimerase"
                     /protein_id="HAY9053940.1"
                     /translation="MNKTITALAIMMASFAANASVLPETPVPFKSGTGAIDNDTVYIG
                     LGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNREGLTQ
                     VFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNE
                     AGKDSTAVDKINAYYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK
                     GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIF
                     AGGAGFKGSRENYQHGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLPW
                     NNSLLIIGGETAGGKAVTDSVLISVKDNKVTVQN"
     gene            11996..12976
                     /locus_tag="JN001_002762"
     CDS             11996..12976
                     /locus_tag="JN001_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709926.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sialate O-acetylesterase"
                     /protein_id="HAY9053941.1"
                     /translation="MDAIISPDYYYVLTIAGQSNAMAYGEGLPLPAREDAPHPRIKQL
                     ARFAHTHPGGPSCHFNDIIPLTHCPHDVQDMQGYHHPLATNHQTQYGTVGQALHIARK
                     LLSFIPDNAGVLIVPCCRGGSAFTAGSEGTYSERHGASHDACRWGTDTPLYQDLVSRT
                     RAALAKNPQNKFLGVCWMQGEFDLMTSDYASHPQHFNHMVEAFRRDLKQYHSQLNNIT
                     DAPWFCGDTTWYWKENFPHAYEAIYGNYQNNVLANIIFVDFQQQGERGLTNAPDEDPD
                     DLIMGYYGSAYRSPENWTTALRSSHFSAAARRGIISDRFVEAILQFWRGK"
     gene            complement(12984..13106)
                     /locus_tag="JN001_002763"
     CDS             complement(12984..13106)
                     /locus_tag="JN001_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012139841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY9053942.1"
                     /translation="MISFVFLLLVCPNCHAMLHRRKPPFTPEELKALMDANKSN"
     gene            13188..14060
                     /locus_tag="JN001_002764"
     CDS             13188..14060
                     /locus_tag="JN001_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004186812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY9053943.1"
                     /translation="MASSKSLQQAIANIKIWHKGEQRAPHKPLLLLYVLAGYLNGHPR
                     LFDYGSEIYEPLHSLLERFGPQRSQYRPDMPFWRLQGDGFWQLHNAELCSTAGSSRQP
                     PVKELNEYHVAGGFDEQHYALVTGNKKLINTLAQQILEAHFTESIQEEIADELGFDLQ
                     QIRKQRDPLFRKNVLRAYNYQCAICGFNMRHDDTTVALEAAHIKWKQHGGPCEIPNGL
                     ALCAIHHKAFDKGSIGLDENMRVLVSDAVNGGGSVERLFWDFDGKIIALPQVRKNYPY
                     EGFVEWHRNEVFRG"
     gene            14105..14284
                     /locus_tag="JN001_002765"
     CDS             14105..14284
                     /locus_tag="JN001_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001153035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053944.1"
                     /translation="MQDLAASLQLAFDSGAKRVLLPISWAMDIPTVPAELFTKFQVSF
                     YSEPVDAVYKALDVN"
BASE COUNT         4062 a         3345 c         3166 g         3929 t
ORIGIN      
        1 ctcctaacga taccgtgtta ttcgctggaa taatcgtacc gttgcgcgtc aactgtacgc
       61 cgacgccctg cgctggtgaa aacgacgcgg tattggtgaa aatcgagttg cccgcatctg
      121 cggttgtgcc ggagaggtaa taccccaggt tttggctttt cgcacaataa acggtaagag
      181 gaattggcac tgaaccaggg tagtccggca gagtaacggt gacatcacga gcagaaacat
      241 cgcagccgcc agtaggcacc accacatcat tattggcgta aatattccac acaaactgga
      301 aatcatcgct gttatagttg ttggtctgtc gcaaaataag cacggcaatt aatgagccag
      361 ctttaatcgc caccccgccc gcactgctca caggcgtcaa ataaagcgcc accggccacg
      421 gcttatccgt tctcgaatta taaacaaccc gcggcgtttc gctggtggtc ggaaatggat
      481 agctactgcc actatatttt acggtcccgg aaaaattaga taacacgccg ccataagccg
      541 agcctcgttg cagtgtgaca tagtctgtaa tggtttccgg ataatcgtta tggcaaaaga
      601 tttgcgtcga aagatctacg accaggtttt gccccacatt cacgacaggc gcaaggttta
      661 cataaacatt agcgctgcca ccgccaatag ggatagcagt accattggcg gttttacagg
      721 cgaatgacca ggcatttacc gaccagccca tcagcagtac agcaaacagg gtaataactc
      781 gtttcattac aattatctct tcgggttcag ctgtaggtat aggtgatgct aatcactgcc
      841 tgaatggttc cctgagtggc tccgccattt accgtcaatg ctctgacctg taacgggaag
      901 tgcgctgatt gtgaggaatc atccacctga actgttttgg tttcgccagt attcaatgtg
      961 ttgccactgt catcctgtag ctctaactgg atgttttgcg cggtcccctg gtttttataa
     1021 tatccggtac tgtcggctgc cccgctgaag ctggcagtga ccctcgacgt tcccaccgga
     1081 caattagtca actcaagcgc aacatcatgc caggccgatg ccgccccggc agacatcaga
     1141 ctgaaagaat aaagatcgcc gagatcaacc gtggcattgg tggtggaaac tgtgcacggt
     1201 ttggcgacga ccttaccgtt caccgtgatg gtgacatcgg ctgcctgtat tgtcgcactt
     1261 gcgagcgcca atattgccgc caataaatac ccacgtttgc gccatttcat gagcatctcc
     1321 agttactgat attcaagagt gaaggtagcc gtggcattga tatgccccgc agtgacaggc
     1381 acctgtgtcg ccattagccg ggcgtaaaaa ttcaacgtat ttggtttacc cggcgtcagg
     1441 gtcgtccacg aaatcgcgga cgatggagca ttaaggggta tctgattttg ctgctcattc
     1501 agaagctgta ttcccagtcc cgaagccgct gacaccgtat tttcaagtgc aagcaggttg
     1561 gcattgtggc tatctgcaac gccggtaaac ccaaccttta cggcagaaac ggcgttacca
     1621 cagggtgaca gcaaaatacg aaatggaacg acaggagtcg ttgcgccaat gttgttaaat
     1681 tgcttcgccg cgttttccat cagatcaaca gtaaaattgg ttgattcagc ggccacacta
     1741 cagccgttat ctctgacata gccgcggata gtaatcgtgc tatccgcagc caaaacgcga
     1801 cttaccgcca gccacaaaaa agcgcacaga agataaaaag gtttgtttct catcacgccc
     1861 ccttaacgac attcagctga tagctgggtt aataactgct gctgactctc tggtggcagt
     1921 tgataattgg cgatacagtg agcattttcc tcttctcccc atttcacctg aacttttccc
     1981 gctaaaggca ttccgctgag gtaaacctga ccattatccg caacaatgcc gctactctgg
     2041 ctactctctg atgtcaccat cgccccaaac ggcagcggct tattattgtg ggttagcgtc
     2101 atgagcagtt ttatcccaac gcgcgcttta aactctgctc gcacgatcgc cccacgagtg
     2161 ggaacaacgt tagcgaccgc gttatctaaa tcgacgttat cagccagggt attggtatcc
     2221 agcgccactc tgttttcccg atattcggtg gcataaggca gcacggcata accgcgccag
     2281 tcggtacgca cccccgtctg gttttcgact tttgcatctt ttgcgccagg cgctttaaca
     2341 agtaccaccg tatcgtttaa cggctgcccc agcgttacgc cattggcatg agccagtacc
     2401 ccaccgctga ctccgtaata gagctgctta atatcatcgc tatggctgta accgatattg
     2461 gcattgccgt aaccaccgcg ataattcagc gtggcgtagc ctgtacttcc gctattacca
     2521 tcgcctcccc cggcatagcc ggtttgcacg ctatagctga ggttgttgtc ttccagcaac
     2581 gtaccgtata caccagccag attggtcatc cgaccgttga gatcgtgtga cacgctgtag
     2641 ctggcactgg catgtcgcca ctgagattta ctgtcagaac gcagccagtg gctgaaagga
     2701 atattgacgt taagcgctaa catctgatcc cgcccttttt gccaggcgtt tttcgtcagg
     2761 ctatagctga gcgtccagtt gatatcttcg aacgcagtat ttaatccagc ctagaattgc
     2821 tcatcgacat tactcgttcc ccaataagtt tgatggctac cactcaaata cagtgttgat
     2881 gtgcgcccga gttgctgagt aacggtgagc tgtaatttcc cgcgtttgtt ataagcgagg
     2941 ttgtaatagt cggtgaattt cggcttaacc tgaataactc catcctgtgt ttcgatgttg
     3001 tagccattca ttcgactgta tgttgtatca gcgaaattaa aatatccgct ggtcgaataa
     3061 cggtaaccca ctaactgaat attcgtgcct gactcattga gcgatttgtt atagagaaaa
     3121 cgcaccgatt gtccgtcatg ctgactgtca tcgggaagtg tggaattagc ctgcgtcata
     3181 tccacagaca gagcgcccag tgcccccatg tttttcccga taccgaaatt aaaagcacga
     3241 taacgatccg ccagttgcgt tccaccatat attgtccagc cagccggaag gccgtggagt
     3301 aatgtacttt ggaaaaagcg gggtttttcc tgctgcgtat ttccactacg gtattctcct
     3361 gccgtaatgg aataacgagt atgcccttca cgttgcaaaa gcgggactga cgaatagggt
     3421 acggtaaaaa tctgcgtgct gccgtcagcc tctttgatcg ttacctgcaa gtcaccacta
     3481 ttacctgcgg catagatatc gttgatggta aaaggccccg gtggcaccgt actattataa
     3541 atgtcatacc cattttgttt aatagtgacc tgtgcagtac cacgagcaat accgtggatc
     3601 accggggcaa atcctctttg gctatcgggt aacatattgt catctgaggc caattgtgcg
     3661 ccgcgaaagt taataccatc gaaaatatcg ccctgggtat aaccatcacc cagcgtcagc
     3721 cgggaacgta acggtattat gtctcgctca agccaggtat tgatatgctg ccatttattt
     3781 ttgctacctg atgatctgtc gctactgtta taactccagc tggtattgtc gcgtaaacac
     3841 cacgcaccaa tatttaaccc actctgtagg tttaaatatg cataatggct gttaccccca
     3901 atctgattct gtacactatt tccgctgaaa ttataattga gcaatccggc attaataccg
     3961 ggatcccata actcaggagg aatataacca cgcgcgcgat tactcataaa tgcctgaggg
     4021 atcgtcaggt tcagtcgctg ctgaccaaca tccagatgcg cagtagcgtc atggatcatt
     4081 gaggttaatg gcacgcaggc atcatctgcc agcagattca taccggagac agaagccgca
     4141 ttcagcccca tactggcaag ttgcgcgcgt gtcaggcagg gaacaatccc ttgttcactg
     4201 tcgcccgtat taaatgtgac atcacgcgtt gccatataac cattattcaa atagatatcg
     4261 acgcgatacg tccctggcgg taattcttgc ccattttcaa aacgcgataa atcggccaca
     4321 gcctggggat catccgctaa aaagcgcgga ttaaaataga gttcggcaga tgacaaaggt
     4381 gcctgtgcgg caaaagcaca ggcgacaacg agccggacaa aaaaaccagc caaacgatgc
     4441 ttacgaatat gcaagcattg tgtgtttcgc tggtaaagtc ttaaattcag atatgacatt
     4501 attcctccgg tttaaaatta cccggcagtc aattcttttt attcaggcga gaaattcccc
     4561 ctgcgttatt ccattacgcc cgtcattttg ggggtaagtg cgccataatc atttattgtt
     4621 cggtaagtaa tattgcttcc tgcatcagaa ggcaatttaa ccgtgctttc gcccattgga
     4681 ggcaccaatg cattttcaag aacccgggtt ccggcattca actctgttac cgtcagataa
     4741 tagggtgtcg ggttaatcag cgtcagagaa ttcgcgctac gacgaaatct taatttttct
     4801 gcggcctgat cgggtggcaa cgctaattta gccgggcgat agtacagttt aatgcggctg
     4861 ataattgcga actgtagcgt attctcagtc aattttgatt tatccattga cggaatcgct
     4921 ttaacattca tccagaataa actttcccgg tcctgtggca attggttatt tgttgcatca
     4981 agaatacgca aggtattctc tttttttccc ttcatcgcaa acagaggagg cgtcacgata
     5041 aaacgaccat cctttacacc atcggcattt tccatccatg attgaattaa ataggtacta
     5101 ttttcatcat tatttgtcac ggcaagttgc acttgttttt gccctgccgg ataaattacg
     5161 cgagtcgcac ctaaggccac tcccgcttca gcgcgtccgg caaccatcat tgccatgaac
     5221 atcaggatac ctgccagcaa gcagaatgtt atttcctgcg atttccttac attggcgttt
     5281 ttattactca ctgtcctgtt cctgttatca cattatctgc tgaacaatta ctgataggtt
     5341 aaagagaacc aggcctgggc attggcgatg ccgccagtaa cccaacgccc ggtagcacga
     5401 tatttggcga tgaaatgtag cgaagtagag cctgagtaaa gccgtttcca gtttactgga
     5461 ggacgattaa tcggtacgag gtttccttca tcatcaaaca acgctacgcc aatattggtg
     5521 gctatccctg gcccctctcc cacggaaagc acatccggat ttttaccatc cgcgacaccg
     5581 tgaaacgcca cacccacacg ttcactcacc accgtgctac attcccgtaa atgaataaca
     5641 aaaggcaccg gtgcgctatc ttcccctacc gcatgaaacc ggttactgct gatttgcccc
     5701 atattgaccg tcatttgttt atcaccggct tcaatccggc aagtttccgc aataatgacg
     5761 ccctgaaatt gcatatttcc gccgggcagc gtagtattcc atttatttcc ggccagagca
     5821 aacattggca gcaacgacgc taatagaaat aatctcttcc ttttcatcgt tatttttatc
     5881 gcacaagggt gggcatccct gcccgtaatg acgtccctga acctgggtag gttattgata
     5941 ctgaaccttg aaggtcgcat ccgcattagc tgcgccaggg gttgcgacac cggttgcata
     6001 ataacgcgcc tggaacggaa tggtgttagt accgttattc agggttgttt gctcactgaa
     6061 tgtcgcacca tccagcgtca gcgcagcacc cgttctgtcc aggatctgta caccaacgtt
     6121 tgttgcgcta cccgcagctg aactctgcag agccagaacg ttggtatgac ccgcatcaat
     6181 cgccgtacct aaaaaggcaa ctgcggcttt agatgcaaca ttggtatcgc aatcattcag
     6241 ctgaatgtta aaaccgacag cagaactggt tgctccttcc tgtgccagcg atgcggtacg
     6301 aacctgtcct aactgaacga tttgatcaac agagcctgca tcaactgcgc aagcggcgtt
     6361 aacaacttcc cctttaaagt gaacggtccc accattaacc gtcgtggcag cggccagagc
     6421 cgctgtagaa ctgagggaca gagccgacag aacaacgatt gccagagttt taattttcat
     6481 gctgctttcc tttaaaaaaa ctatttctaa atcgacatgg gcagtcgttc tgtacacttt
     6541 gttttgtcaa cgagtttgac tgccaacact gcacagtttt cccccaaaag atgaaacatt
     6601 tggggccatt ttgactcata gaggaaagca tcgcgcacaa actttttcag tttatttgtt
     6661 ggcttaatat tctattgtta tctttattta tagattttta tattgcatga ggtggttttt
     6721 ggagagaaga atgaggaaga tgcgtcgagc cacagaaacg ttagctttac atatagcgga
     6781 ggtgatgtga aattaattta caagagaaat aatttacata tcaaacagtt agatgatttt
     6841 tgtcgttttt taaaattttt atgcttgaga aaaaatacgt aacttattta tgatatggac
     6901 aatttggccc caattgtctt gtatttattt tttaacttta ttatcaataa gttaattcaa
     6961 acctcttctc tttttaattt ttcgtttatg agattatttc tttcccataa tccggcaaaa
     7021 cgagcagcat tactggcggt ataacgtaca gtatggcgaa tatttcgatg cccgagataa
     7081 tcctgaatta aacgagtatc tgcaccacgc tccgccagtt cataaccgca agcatgcctt
     7141 aacatatgag gatgagtctg cgttacggtt ccagcttcaa taccggcatc acgaataatg
     7201 cgataggcct gctggcgaga aagccgactc ccgcggcgag aaataaatat ggcgtcggtc
     7261 cggtcagcgc ctttccagtt agcacgttcc agggtccagc gttccacagc ttcacgctca
     7321 tcaaaacgta acgggtgaac ggtagaaaat ccgttcttca gtcggcgaat atttattcga
     7381 ccttcattaa ggtcaagatc ctgataatgc agatcaagca gttcactaat acgcatccca
     7441 tgccgatatg ccaacagaat aagacaataa tctctggctc ccgttgcccc gtaacaaacc
     7501 gcctgcatca tggcctgaac ttctttaccg gtaagataac gacgtttact cacaatagta
     7561 gtactcctaa ctgagatata tttgaatgaa tacctatagg aaacctcaat cggtcaaaat
     7621 tagcccaata gataaaaaga taaccacaca cgaagtgatg tggctatcag tcaattacat
     7681 taaatatcat acaaaaataa aatatcactg atgtgacaac atctattttc attgatttga
     7741 ttcaatataa caatagattg tagtagatta gcttccagtt gcttaaaaaa taaagaaaaa
     7801 agtgcgaaaa caggagaatt taagtgatgt gtaaatttat gaatgatttt gtttatttat
     7861 tttgaagaac ataaaccatt gtattttgta tggatatggt taacttaatg cttattatga
     7921 taattaagaa ttatacttac aataacatca attaataaat ggttaatcat ttttgatata
     7981 tcgtaagaat aatgtagttt ttaacaccat ccctggtatc tcaactatct ctataaaaca
     8041 gcgtgacgct gtcgtcctct ggctctatcc cagatgccgt aaaaacgccc tgcattgctg
     8101 gcggtatacc agacagtatg acgaatattg cgatgcccaa gataatcctg gataagtcgc
     8161 gtatctattc ccatattcgc caaagcaaaa ccacacgaat ggcgtaacat gtgcggatga
     8221 atctccagtg acaacccggc attaccaccg gaagtcgaga taatatggta aaactgttgc
     8281 cgagaaagcg gattcccctt acgcgataaa aatacccact cgctctcagc atgcgggtac
     8341 gaagtacgga tactcaacca gttttttaaa gcctgaactt ctttattcaa tagcgggggc
     8401 gttgttgaaa agcctttttt taatcgatgg atatatatac actttgcctt aagatcaata
     8461 tccgaaatcc tcaatcgaca aatttcactc gcccggaaac catgaataaa acaaagcaaa
     8521 gtcagacaat aattacgtgc tgcatgaggc ccggtatttg ctgctttaag gagtgattcg
     8581 atttcactat gggtcaggaa gttccttttt ttgttatcag ccttattctt catcgttttt
     8641 cccttataat tacagacgcg cactagctgt gctgggttag caataatcca acatttttat
     8701 cctgattatg tttataaaag cgaacgtttg cttaataact aacgtaagtg gaccagttct
     8761 tctgagtgaa cttaaatggg gtagcaacag ttaattataa taacgttgcc atacaaacgc
     8821 tatgctcttg catgctatgt acctttatat atttatcaat cggatacgaa tctaataata
     8881 cccctcatca ttaatgcaac taatcttatc taaatatcat gtgatatgtt ctgtaacaag
     8941 taaaatcagc ataaaaaatt cagcaaaatt taatattcgt tcaactagcc gtctcacata
     9001 tgacattatt agtcaactcc atttgccaca aaatggctat ttcatggaac gcagtaattt
     9061 cttagtggct attatcatgc taattcttag gtccctagcg attattcctg gctgattcgt
     9121 cagcttacgc catgagattg ttacattcct ttttatcctg gagatatggg ggaacgcagg
     9181 agatgatttt ttcatctaca ttcgttggta aatatagctt tggtcactac gacttaaacc
     9241 ttcctcaatc acagccattc gccgggcgat acggcaaaca aactaagtga aacatcatcc
     9301 tgaaaacacc aacatcaaca agcctctcca gatcgacttc agaagtgacc agttacaagc
     9361 cacaaaccag gaaacatatt tcatgatgag aattatgctc agcctgatgg cgggtaaaca
     9421 ctgattttca ccaagctcac tgagttagct tgcaaagctt cccttgttta gacttcaaat
     9481 aaattattta taaaacaaac atttaaacaa agatctttag tttttgaaga ccaccgcaag
     9541 tgttcgtctg gcttcacatg gcatcttcct cttagaaaaa gatcgacata ttttgtgaca
     9601 cgaattgcaa atctggtttt gttgtatgga ttgcgtgatt tttgatctgg tataacaggt
     9661 ataaaggtgc accaagatag tcaatgagac agggcatctc gcaatctatg gcaaacatca
     9721 cttcagttct ttctcatcgg gtgatgaaaa cgcacttcag tctgaaagga atatgaaaat
     9781 gagatcaaca gacactctat tttatgactc tgggtaaaat ggattgagta agtgatatag
     9841 cttacgaaaa ttcaaatcaa ttaaacatca gaagagattt tatactcagg tatttaatct
     9901 ggatctctgt ttatttaaat aatgtgaaaa gagatttttc acaggagacc ttatacaaaa
     9961 aaatataaaa tacagctacc ggttgccaaa gacactataa gcctggcaaa aaatattaca
    10021 caacataaat gctaattgtt tatgcgggct ttgtattgct ttctgtatcc tacaaatgag
    10081 tgaaatttat gaaaaaggct aaaatacttt ctggcgtatt attactgtgc ttttcgtccc
    10141 cattaatttc tcaggctgcg acactggacg tacgtggtgg atatcgtagt ggaagccacg
    10201 cctatgagac tcgactcaaa gtcagtgagg gatggcaaaa tggatggtgg gcaagcatgg
    10261 aaagtaatac ctggaatacc attcatgata ataaaaagga aaatgccgca ctcaatgatg
    10321 ttcaggttga agttaattac gcgattaaac ttgatgatca atggacggtg cgcccgggaa
    10381 tgttaacgca ttttagcagc aacggcacac gctacggacc ctacgtaaaa ctgtcctggg
    10441 acgcgacaaa agatcttaat tttggcattc gctatcgtta cgactggaaa gcttaccgac
    10501 aacaagactt atccagtgat atgtctcgtg ataacgttca tcgttgggat ggatatgtca
    10561 cttaccatat taatagtgat ttcaccttcg catggcaaac gacgctatac agcaaacaga
    10621 acgattatcg ctatgcaaac cataagaaat gggcgacgga aaatgcattt gttctacaat
    10681 accatatgac gcccgatatt acgccataca tagaatatga ctaccttgac cgtcagggtg
    10741 tttacaacgg cagagataat ttatcggaaa acagttatcg cattggtgtg tcatttaaac
    10801 tgtagtagac aggagacagt cacaatgaat aaaacaataa cggcgcttgc tatcatgatg
    10861 gcttcatttg ccgcaaacgc gtctgtatta ccggaaactc ctgtgccatt taaaagtggt
    10921 accggagcaa ttgataacga cactgtctac attggtttag gtagcgcagg tacggcatgg
    10981 tacaagctgg atacacaggc caaagataaa aaatggacag cgttagctgc attccctggt
    11041 ggaccaagag atcaagcaac ctctgcattt attgatggca atctgtatgt gtttggcggc
    11101 attggcaaaa acagagaggg cttgactcag gtatttaatg acgtacacaa atacaacccc
    11161 aaaaccaata gctgggttaa attgatgtcg cacgcaccga tgggcatggc gggtcatgtg
    11221 acttttgtac acaacggcaa ggcttatgtt actggcggtg ttaaccagaa tatcttcaat
    11281 ggctattttg aagatctcaa cgaggctgga aaagattcaa ccgctgtaga taaaatcaat
    11341 gcctactatt ttgacaaaaa agcagaagat tatttcttca ataagtttct gttgtctttt
    11401 gatccctcaa cacagcaatg gagttacgct ggcgaatcgc cctggtacgg aacggctggt
    11461 gcggcggttg tgaataaagg tgataaaacc tggcttatta atggcgaagc caaacccgga
    11521 ttgcgaacgg atgccgtatt tgaacttgat ttcaccggta ataatttaaa atggaataag
    11581 cttgctcccg tctcatcacc agatggcgtc gctggcggtt ttgcggggat aagcaatgat
    11641 tctcttatat ttgccggagg ggccggattc aaaggttcac gagaaaatta ccagcacgga
    11701 aagaactatg cgcatgaagg cctgaaaaaa tcatatagca ctgatattca tctttggcat
    11761 aacgggaaat gggataaatc gggtgaatta tcgcaaggtc gggcctacgg agtatcattg
    11821 ccctggaata atagtctatt gattattggc ggtgaaactg caggcggcaa agcggtgacg
    11881 gattcagttt tgatctctgt gaaggataat aaagtcacag tacaaaacta acgcttcagg
    11941 gccccagtaa aggggccctg ctatcaattt atcatttcaa ttacgcgaaa attatatgga
    12001 cgcaataata tcgcccgatt attactatgt tcttaccatt gctggtcagt ctaatgctat
    12061 ggcgtatggc gaaggactgc cattaccggc cagggaagat gcgcctcatc ccagaattaa
    12121 acaattagcg agatttgcgc atacgcatcc cggaggcccg tcatgtcact ttaacgacat
    12181 tattccacta actcactgcc cacacgatgt tcaggatatg cagggttatc accatcctct
    12241 ggcaacgaat catcaaacac agtacggcac cgttggccag gcactgcata ttgcacggaa
    12301 attactgtcc tttattcctg ataacgcagg ggttctcatc gttccgtgtt gccgtggcgg
    12361 atcggctttt accgcgggca gcgaagggac atattcagaa cggcacggag ccagccatga
    12421 tgcttgtcgt tggggaacgg atactccgct ataccaggat ttagtcagca gaacgcgagc
    12481 cgcactggca aaaaatccgc agaacaaatt cctcggcgta tgctggatgc aaggcgaatt
    12541 tgacttaatg accagtgact acgcgtcaca ccctcaacac tttaatcata tggttgaagc
    12601 ctttcgtagg gatctaaaac aataccattc tcagcttaat aatattactg acgcgccgtg
    12661 gttttgcggc gataccacct ggtactggaa agaaaatttc cctcatgcgt atgaagctat
    12721 ttatggcaat tatcaaaata atgttttagc taatattatt ttcgtcgact tccagcaaca
    12781 aggtgaaaga ggactgacga acgcgcctga tgaagacccg gacgatttaa tcatgggata
    12841 ttacggttca gcgtaccgct caccggagaa ctggacgacg gcactgcgaa gcagtcattt
    12901 cagcgcggca gcccgtcggg ggattatttc tgacaggttt gtagaagcaa ttttgcagtt
    12961 ttggcgcgga aagtgagcgt tcattaattt gatttattcg catccatcaa cgcttttaac
    13021 tcctccggcg taaacggtgg tttgcgtcgg tgcaacatcg catggcaatt agggcacaca
    13081 agcagcaaaa aaacaaatga gatcaaggta atatatcttc acttgcaggc ttgaacagca
    13141 gaaaatttgc gagcatgatc gcaattattt cactgctagg gatatcaatg gcttccagta
    13201 aatcgctaca gcaggcaatt gccaatataa aaatctggca taagggtgaa cagcgcgcac
    13261 cgcataaacc attgttattg ctatacgtat tagcgggata cctgaatgga catccacgcc
    13321 ttttcgatta tggatcggaa atctacgaac ctctgcacag tttactggaa cgttttgggc
    13381 cacagcgttc acagtaccga cctgatatgc cgttctggcg attacaaggc gacggattct
    13441 ggcaattaca caatgccgag ctttgctcaa cagcagggag cagccgacaa ccgccagtga
    13501 aggaactgaa cgaataccac gttgcaggcg gtttcgatga acagcactac gccctggtaa
    13561 ccggcaataa aaaactcatc aatactctag cgcaacagat actcgaagcg cacttcaccg
    13621 agagtattca ggaagaaatt gctgacgagc tgggttttga tctccagcaa atccgtaaac
    13681 agcgcgaccc gttatttcgc aaaaatgtat tacgcgctta taactaccag tgcgcgatat
    13741 gtggctttaa tatgcgccac gacgacacca ccgtcgcgct ggaagcggcg catataaaat
    13801 ggaaacagca cggcggtcct tgtgaaattc ctaatggcct ggcgctttgc gcaattcacc
    13861 ataaagcctt tgataaagga tcgattggcc tggacgaaaa tatgcgggta ctggtatcag
    13921 atgcagtaaa cggcggaggg agcgttgaga gattattctg ggattttgac gggaaaatta
    13981 ttgcgttgcc gcaggtgcgt aaaaattacc cttatgaggg gtttgtggag tggcatcgga
    14041 atgaggtttt tagggggtga ggttgataac tatcgcagta tgttcaatat tgctgacata
    14101 atcagtgcag gatcttgccg ctagtttaca actcgccttc gatagcggcg caaaacgagt
    14161 tctgttgccg atatcctggg ctatggatat tccaacagtt ccggcagagt tgtttaccaa
    14221 gtttcaggta agtttttact cagaaccggt tgatgcggtt tataaggcgc tggatgtgaa
    14281 ttaacacatt cctcagctta tttacaaaag gattattccc atttgatata atatcagtgc
    14341 caatttactt ttttcaatgg aatatatctc ggctaaataa caataaaact tatcgctaat
    14401 ggattaaata aacaattttc taattcattt cacggtaatg actccaactt actgatagtg
    14461 ttttatgttc agataatgcc cgatgacctt gtcatgcagc tc
//
LOCUS       DADMJE010000104        14343 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.105, whole genome shotgun sequence.
ACCESSION   DADMJE010000104 DADMJE010000000
VERSION     DADMJE010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14343
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.105"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..619)
                     /locus_tag="JN001_002766"
     CDS             complement(<1..619)
                     /locus_tag="JN001_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707761.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C"
                     /protein_id="HAY9053945.1"
                     /translation="MRGKKRIGLLFLLIAVVVGGGGLLLAQKALHKTSDTAFCLSCHS
                     MSKPFEEYQGTVHFSNQKGIRAECADCHIPKSGMDYLFAKLKASKDIYHEFVSGKIDS
                     DDKFETHRQEMAETVWKELKATDSATCRSCHSFDAMDIASQSESAQKMHNKAQKGGET
                     CIDCHKGIAHFPPEIKMDDNAAHELESQAATSVTNGAHIYPFKTSR"
     gene            complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JN001_002767"
     CDS             complement(1007..1753)
                     /gene="cutC"
                     /locus_tag="JN001_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310611.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HAY9053946.1"
                     /translation="MALLEICCYSMECALTAQQNGADRVELCAAPKEGGLTPSLGVLK
                     SVRQWVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFPGLVTGVLDVDGNVD
                     MPRMEKIMAAAGPLAVTFHRAFDMCANPLNTLSNLAELGIARVLTSGQKSDALQGLSK
                     IMELIAHRDAPIIMAGAGVRAENLHHFLDAGVLEVHSSAGAWQASPMRYRNQGLSMSS
                     DAHADEYSRYVVDGAAVAEMKGIIERHQAK"
     gene            complement(1767..2333)
                     /locus_tag="JN001_002768"
     CDS             complement(1767..2333)
                     /locus_tag="JN001_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707763.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY9053947.1"
                     /translation="MANWQSIDELQDIASDLPRFTHVLDELSRRLGLDITPLTADHIS
                     LRCHQNVTAERWRRGFEQCGELLSENMINGRPICLFKLHEPVQVAHWQFSIVELPWPG
                     EKRYPHEGWEHIEIVLPGDPETLNARALALLSDEGLSLPGISVKTSSPKGEYERLPNP
                     TLAVTDGKTTIKFHPWSIEEIVASEQSA"
     gene            2549..4282
                     /gene="argS"
                     /locus_tag="JN001_002769"
     CDS             2549..4282
                     /gene="argS"
                     /locus_tag="JN001_002769"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001025321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HAY9053948.1"
                     /translation="MNIQALLSEKVRQAMIAAGAPADCEPQVRQSAKVQFGDYQANGM
                     MAVAKKLGMAPRQLAEQVLTHLDLNGIASKVEIAGPGFINIFLDPAFLAEHVQQALAS
                     DRLGVSTPEKQTIVVDYSAPNVAKEMHVGHLRSTIIGDAAVRTLEFLGHKVIRANHVG
                     DWGTQFGMLIAWLEKQQQENAGEMELADLEGFYRDAKKHYDEDEEFAERARNYVVKLQ
                     SGDEYFREMWHKLVDITMTQNQITYDRLNVTLTRDDVMGESLYNPMLPGIVADLKAKG
                     LAVESEGATVVFLDEFKNKEGEPMGVIIQKKDGGYLYTTTDIACAKYRYETLHADRVL
                     YYIDSRQHQHLMQAWAIVRKAGYVPESVPLEHHMFGMMLGKDGKPFKTRAGGTVKLAD
                     LLDEALERARRLVAEKNPDMPADELEKLANAVGIGAVKYADLSKNRTTDYIFDWDNML
                     AFEGNTAPYMQYAYTRVLSVFRKAEINEEQLAAAPVIIREDREAQLAARLLQFEETLT
                     VVAREGTPHVMCAYLYDLAGLFSGFYEHCPILSAENEEVRNSRLKLAQLTAKTLKLGL
                     DTLGIETVERM"
     gene            4459..4947
                     /locus_tag="JN001_002770"
     CDS             4459..4947
                     /locus_tag="JN001_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416391.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HAY9053949.1"
                     /translation="MFKFLVLTLGIISCQAYAEDTVIVNDHDISAIKDCWQKNSDDDT
                     DINVIKSCLRQEYNLVDAQLNKAYGEAYRYIEQVPRTGVKKPDIEQLNLLKKSQRAWL
                     DFRDKECELILSNEDVQDLSDPYSESEWLSCMIIQTNTRTRQLQLYRNSEDFYPSPLT
                     RG"
     gene            complement(5067..5459)
                     /locus_tag="JN001_002771"
     CDS             complement(5067..5459)
                     /locus_tag="JN001_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FlhE"
                     /protein_id="HAY9053950.1"
                     /translation="MRTLLAILLFPLLVQAAGEGMWQASSVGITLNHRGESMSSAPLS
                     TRQPASGLMTLVAWRYQLIGPTPSGLRVRLCSQSRCVELEGQSGTTVAFSGIAAAEPL
                     RFIWEVPGGGRLIPPLKVQRNEVIVNYR"
     gene            complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JN001_002772"
     CDS             complement(5459..7537)
                     /gene="flhA"
                     /locus_tag="JN001_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HAY9053951.1"
                     /translation="MSNLAAMLRLPANLKSTQWQILAGPILILLILSMMVLPLPAFIL
                     DLLFTFNIALSIMVLLVAMFTQRTLEFAAFPTILLFTTLLRLALNVASTRIILMEGHT
                     GAAAAGKVVEAFGHFLVGGNFAIGIVVFVILVIINFMVITKGAGRIAEVGARFVLDGM
                     PGKQMAIDADLNAGLIGEDEAKKRRSEVTQEADFYGSMDGASKFVRGDAIAGILIMVI
                     NVVGGLLVGVLQHGMSMGHAAESYTLLTIGDGLVAQIPALVISTAAGVIVTRVSTDQD
                     VGEQMVNQLFSNPSVMLLSAAVLGLLGLVPGMPNLVFLLFTAGLLGLAWWIRGCEQKA
                     PAEPKPVKMAENNTVVEATWNDVQLEDSLGMEVGYRLIPMVDFQQDGELLGRIRSIRK
                     KFAQEMGFLPPVVHIRDNMDLQPARYRILMKGVEIGSGDAYPGRWLAINPGTAAGTLP
                     GEATVDPAFGLNAIWIESALKEQAQIQGYTVVEASTVVATHLNHLISQHAAELFGRQE
                     AQQLLDRVAQEMPKLTEDLVPGVVTLTTLHKVLQNLLDEKVPIRDMRTILETLAEHAP
                     IQSDPHELTAVVRVALGRAITQQWFPGKDEVHVIGLDTPLERLLLQALQGGGGLEPGL
                     ADRLLAQTQEALSRQEMLGAPPVLLVNHALRPLLSRFLRRSLPQLVVLSNLELSDNRH
                     IRMTATIGGK"
     gene            complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JN001_002773"
                     /pseudo
     CDS             complement(7530..8633)
                     /gene="flhB"
                     /locus_tag="JN001_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416394.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
     gene            complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JN001_002774"
     CDS             complement(8716..9360)
                     /gene="cheZ"
                     /locus_tag="JN001_002774"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein phosphatase CheZ"
                     /protein_id="HAY9053952.1"
                     /translation="MMQPSIKPADEHSAGDIIARIGSLTRMLRDSLRELGLDQAIAEA
                     AEAIPDARDRLYYVVQMTAQAAERALNSVEASQPHQDQMEKSAKALTQRWDDWFADPI
                     DLADARELVTDTRQFLADVPAHTSFTNAQLLEIMMAQDFQDLTGQVIKRMMDVIQEIE
                     RQLLMVLLENIPEQESRPKRENQSLLNGPQVDTSKAGVVASQDQVDDLLDSLGF"
     gene            complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JN001_002775"
     CDS             complement(9371..9760)
                     /gene="cheY"
                     /locus_tag="JN001_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005127682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheY"
                     /protein_id="HAY9053953.1"
                     /translation="MADKELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALN
                     KLQAGGYGFVISDWNMPNMDGLELLKTIRADGAMSALPVLMVTAEAKKENIIAAAQAG
                     ASGYVVKPFTAATLEEKLNKIFDKLDM"
     gene            complement(9775..10713)
                     /locus_tag="JN001_002776"
     CDS             complement(9775..10713)
                     /locus_tag="JN001_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000036372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HAY9053954.1"
                     /translation="MSKIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDL
                     IKKFNPDVLTLDVEMPRMDGLDFLEKLMRLRPMPVVMVSSLTGKGSEVTLRALELGAI
                     DFVTKPQLGIREGMLAYSEMIAEKVRTAAKASLAAHKPLSAPTTLKAGPLLSSEKLIA
                     IGASTGGTEAIRHVLQPLPLSSPALLITQHMPPGFTRSFADRLNKLCQIGVKEAEDGE
                     RVLPGHAYIAPGDRHMELARSGANYQIKIHDGPVGMLAMRQAGAWTLAQNEASCVVFG
                     MPREAINMGGVCEVVDLSQVSQQMLAKISAGQAIRI"
     gene            complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JN001_002777"
     CDS             complement(10716..11528)
                     /gene="cheR"
                     /locus_tag="JN001_002777"
                     /EC_number="2.1.1.80"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005063150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HAY9053955.1"
                     /translation="MRLPGCSRYSFRRISQLIYQRAGIVLADHKRDMVYNRLVRRLRS
                     LGLTDFGHYLNLLESNQHSGEWQAFINSLTTNLTAFFREAHHFPLLADHARRRSGEYR
                     VWSAAASTGEEPYSIAMTLADTLGTAPGRWKVFASDIDTEVLEKARSGIYRHEELKNL
                     TPQQLQRYFMRGTGPHEGLVRVRQELANYVDFAPLNLLAKQYTVPGPFDAIFCRNVMI
                     YFDQNTQQEILRRFVPLLKPDGLLFAGHSENFSHLERRFTLRGQTVYALSKD"
     gene            complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JN001_002778"
     CDS             complement(11666..12232)
                     /gene="flhC"
                     /locus_tag="JN001_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhC"
                     /protein_id="HAY9053956.1"
                     /translation="MSEKSIVQEARDIELITLGARLQMLESETQLSRGRLIKLYKELR
                     GSPPPKGMLPFSTDWFMTWEQNVHASMFCNAWQFLLKTGLCNGVDAVIKAYRLYLEQC
                     PQAEEGPLLALTRAWTLGRFVESGLLQLSSCNCCGGNFITHAHQPVGSFACSLCQPPS
                     RAVKRRKLSQNPADIIPQLLDEQRVQAV"
     gene            complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JN001_002779"
     CDS             complement(12235..12585)
                     /gene="flhD"
                     /locus_tag="JN001_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416406.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar transcriptional regulator FlhD"
                     /protein_id="HAY9053957.1"
                     /translation="MHTSELLKHIYDINLSYLLLAQRLIVQDKASAMFRLGINEEMAT
                     TLAALTLPQMVKLAETNQLVCHFRFDSHQTITQLTQDSRVNDLQQIHTGIMLSTRLLN
                     DVNQPEEALRKKRA"
     gene            13364..13792
                     /gene="uspC"
                     /locus_tag="JN001_002780"
     CDS             13364..13792
                     /gene="uspC"
                     /locus_tag="JN001_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein UspC"
                     /protein_id="HAY9053958.1"
                     /translation="MSYSNILVAVAVTPESQQLLAKAVSIARPVKGHISLITLASDPE
                     MYNQLAAPMLEDLRSVMQEETQSFLDKLIQDAGYPVDKTFIAYGELSEHILEVCHKHH
                     FDLVICGNHNHSFFSRASCSAKRVIASSEVDVLLVPLTGD"
     gene            complement(13799..>14343)
                     /locus_tag="JN001_002781"
     CDS             complement(13799..>14343)
                     /locus_tag="JN001_002781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha,alpha-trehalose-phosphate synthase"
                     /protein_id="HAY9053959.1"
                     /translation="QIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQ
                     HFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT
                     SALIVNPYDRDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQI
                     VPRSAESQQRDKVATFPKLA"
BASE COUNT         3688 a         3785 c         3348 g         3522 t
ORIGIN      
        1 tgcgagaagt tttgaaagga taaatatgtg cgccattagt cactgaagta gcggcctgac
       61 tttccagctc atgcgccgcg ttgtcatcca tttttatttc tggcggaaaa tgggcaatgc
      121 ctttatgaca atcgatacag gtttcgccgc ccttttgtgc tttgttatgc attttctgcg
      181 cagattcact ttgcgaggca atatccatgg catcaaaaga atggcaacta cggcacgttg
      241 cagagtcagt tgcttttaat tctttccata ctgtttcggc catttcctgg cgatgagttt
      301 cgaacttatc gtcactgtct attttgccgc taacaaattc atgataaata tctttagatg
      361 cttttaattt agcaaataaa taatccatcc ctgactttgg aatatggcaa tctgcacatt
      421 ccgcacgtat ccctttctgg ttcgaaaagt ggacagttcc ctgatattcc tcaaaaggtt
      481 tactcatcga gtggcaggaa aggcaaaatg ctgtatccga cgttttatgt aaggcttttt
      541 gcgccagcaa taacccgccg ccaccaacca caaccgctat cagcaaaaac aataacccaa
      601 tgcgtttttt ccctcgcata gattcctcta aataaattcc agaacaccga aatcattgga
      661 taattaaata cacaacgaat taaccgcttg cataactcgg cacaacactg cctgaaataa
      721 tcgataaaga atatgattta ttacaatgta atcattaatt gctaaggaat aaccctgttg
      781 ttatttagaa tatatatttg tcagttttag caatttaaac cccataatta atgtgaatat
      841 ataaaatatt tttagcacaa cgctatgttc actgtcaccc gctcaacaga tcacggttat
      901 cgtacgtttt ttatactgct cagggataaa aaaaggcccc tgtcgaaatt gcaggggcct
      961 ggtacgagca agcatcatat tgggcgacat gatgcaacgg taaaaatcat ttggcctgat
     1021 ggcgttcaat gattcctttc atttcagcaa ccgccgcccc gtctacgaca taacgcgaat
     1081 actcgtccgc gtgtgcatct gatgacatgg acaatccttg attacgataa cgcatcggtg
     1141 aagcttgcca cgctcccgcg gagctatgga cttccagcac tccggcatcg aggaagtggt
     1201 gcaggttttc tgcacggact cctgctccgg ccataatgat tggagcatca cgatgggcaa
     1261 taagttccat aatttttgat aaaccttgca gtgcatctga tttttgccct gatgtcagca
     1321 cccgggcgat gcccaattcc gcaagattac tgagtgtatt taaagggtta gcgcacatat
     1381 cgaaggcgcg atgaaaagtc actgccagcg gaccggcagc agccattatt ttttccattc
     1441 gtggcatatc gacattcccg tcaacatcga gcacgcccgt caccagtcca ggaaaaccta
     1501 attcgcggac tgtgcgcaca tcctcaagaa tggcggcaaa ctcaccgtcg ctgtagcaaa
     1561 aatcaccacc gcgtgggcgg ataatcggat gcacagggat cgtcacccac tggcgcacgg
     1621 atttcagtac acccaacgac ggcgttaagc ccccctcttt tggggctgcg cataattcaa
     1681 ctctgtctgc gccgttttgc tgcgccgtta gtgcacattc catgctgtaa cagcaaattt
     1741 ccagtaatgc catttttact ccttaattac gccgactgct cgctggcaac gatctcttca
     1801 atggaccacg gatgaaactt aatagttgtt ttgccatcgg tgaccgccag cgtcggattc
     1861 ggtaatcgct catactcacc ttttggcgaa ctggttttca ctgagatccc cggtaggctg
     1921 agtccttcat cagaaagcaa tgccagcgca cgggcattca gcgtttctgg atcacccggc
     1981 agaacgattt caatatgttc ccaaccttcg tgtgggtaac gtttttcccc gggccacggt
     2041 agctccacaa tggaaaactg ccagtgcgca acctgtaccg gttcatgcaa tttaaacaga
     2101 caaatcggtc tgccattgat catattttct gacaaaagct cgccacactg ttcaaaaccg
     2161 cgacgccagc gctcagcggt gacgttttga tggcaacgca aagaaatgtg atcggcagtc
     2221 agcggagtga tatccaaccc cagacggcgg gagagttcat ctaatacgtg ggtaaatcgc
     2281 ggtaaatccg atgcaatatc ctgcagctcg tcgatagatt gccagttcgc cataatcact
     2341 cttcgtcttt cagtaaaagc gttaatttac cctgttgccc tgcgccaacc aaccgctgat
     2401 ttcacgccgc ttctgatgca atagtgaaaa cggcaatacg ccacgcgcac gttgctgacg
     2461 aaaacagcca tttgcagtat actcccgccc taatttcttt aactggtgcg ggcaattttt
     2521 gctcgcttca tcaatgtaag gtattccggt gaatattcag gctcttctct cagaaaaagt
     2581 ccgtcaggcc atgattgcgg caggcgcgcc tgcggattgc gaaccgcagg ttcgtcagtc
     2641 agcaaaagtt cagttcggcg actatcaggc taacggcatg atggcagttg ctaaaaaact
     2701 gggtatggca ccgcgacaat tagcagagca ggtgctgact catctggatc ttaacggtat
     2761 cgccagcaaa gttgagatcg ccggtccagg ctttatcaac attttccttg atccggcatt
     2821 cctggctgaa catgttcagc aggcgctggc gtccgatcgt ctcggtgttt ctacgccaga
     2881 aaaacagacc attgtggttg actactctgc gccaaacgtg gcgaaagaga tgcatgtcgg
     2941 tcacctgcgc tctaccatta ttggtgacgc agcagtgcgt actctggagt tcctcggtca
     3001 caaagtgatt cgcgcaaacc acgtcggcga ctggggcact cagttcggta tgctgattgc
     3061 atggctggaa aagcagcagc aggaaaacgc cggtgaaatg gagctggctg accttgaagg
     3121 tttctaccgc gatgcgaaaa agcattacga cgaagatgaa gagtttgccg agcgtgcacg
     3181 taactacgtg gtaaaactgc aaagcggtga cgaatatttc cgcgagatgt ggcacaaact
     3241 ggtcgacatc accatgacgc agaaccagat cacctacgat cgtctcaacg tgacgctgac
     3301 ccgtgatgac gtgatgggcg aaagcctcta caacccaatg ctgccaggaa ttgtggcgga
     3361 tctcaaagcc aaaggtctgg cagtagaaag cgaaggggcg accgtcgtat tccttgatga
     3421 gtttaaaaac aaggaaggcg aaccgatggg cgtgatcatt cagaagaaag atggcggcta
     3481 tctctacacc accactgata tcgcctgtgc gaaatatcgt tatgaaacac tgcatgccga
     3541 tcgcgtgctg tattacatcg actcccgtca gcatcaacac ctgatgcagg catgggcgat
     3601 cgtccgtaaa gcaggctatg taccggaatc cgtaccgctg gaacaccaca tgttcggcat
     3661 gatgctgggt aaagacggca aaccgttcaa aacccgcgcg ggtggtacag tgaaactggc
     3721 cgatctgctg gatgaagcct tggaacgtgc acgccgtctg gtggcagaaa agaacccgga
     3781 tatgccagct gacgagctgg aaaaactggc taacgcggtt ggtattggag cggtgaaata
     3841 tgcggatctc tccaaaaacc gcaccacgga ctacatcttc gactgggaca acatgctggc
     3901 gtttgagggt aataccgcgc catacatgca gtatgcttac acgcgtgtat tgtccgtgtt
     3961 ccgtaaggca gaaattaacg aagagcaact ggctgcagct ccggtaatca tccgtgaaga
     4021 tcgtgaagcg caactggcag ctcgcctgct gcagtttgaa gaaaccctca ccgtggttgc
     4081 ccgtgaaggc acgccgcatg tgatgtgtgc ttacctgtac gatctggctg gtctgttctc
     4141 tggcttctac gagcactgcc cgatcctcag cgcagaaaac gaagaagtgc gtaacagccg
     4201 tctgaaactg gcacaactga cagcgaagac gctaaagctg ggtctggata cgctgggtat
     4261 tgagacagta gagcgtatgt aatcgatttt tcgtgagagt aaagcctgat cagggttacc
     4321 tgatcaggct tttttattgc catctaaatg tattctgaaa atggacatgc cattgttttc
     4381 tgactgttgg ataagaggcc agaagcgtaa tatccggccc cagggaaacg ataacggttg
     4441 aatttaagga ataccgcagt gtttaaattt cttgtattaa cattaggcat tatctcttgc
     4501 caggcttacg cagaagatac ggttatagta aacgaccatg acatttcagc catcaaagat
     4561 tgttggcaaa aaaattcaga tgatgatact gacattaacg tgatcaaatc atgcctgcga
     4621 caagaataca atctcgtcga tgcgcaatta aataaagcct atggtgaagc ttatcgttat
     4681 atagaacaag tgccacgcac aggtgtaaaa aaacctgata tcgaacaact taacttgctt
     4741 aaaaaatcac agcgagcctg gctggatttt agggacaaag aatgtgaatt aatcctttca
     4801 aatgaggacg ttcaggattt aagtgaccct tattctgaat cagaatggct ctcatgtatg
     4861 atcatacaga ccaatacgcg aactcgccag ttgcagctat accgtaactc tgaagatttt
     4921 tatccaagcc ctttgacaag aggataattc acatcttttt ggcatgtttt gttgcaagct
     4981 attcctgata aataattgca acaagacatc gagccttttt cactgagtta ttaaacatac
     5041 tcgcgagcgc gtaatttttt tgtccttcag cgataattca caatcacttc attacgttgt
     5101 acctttagcg gtggaattaa ccgcccaccg cctggcactt cccagataaa tcgcaacggt
     5161 tctgctgccg ctataccgga aaaggccacg gtggttccgc tctgcccctc taattcgaca
     5221 caacgagatt gcgaacacaa gcgaacccgc agtcctgaag gtgtcgggcc gataagctga
     5281 taacgccacg ctaccagcgt catcaatcct gaagcaggtt gtcgcgtaga aagaggcgca
     5341 gacgacatcg actcaccgcg atgatttagc gtaattccta cactacttgc ctgccacatc
     5401 ccctccccgg cggcttgcac cagcagcgga aacaataata ttgctaataa ggttctcatt
     5461 atttgccgcc aattgtcgcc gtcatgcgga tatgtcggtt atcagacagt tccagattcg
     5521 acaggaccac taactgcggc aagctgcggc gcaggaagcg agacaataat ggtcgcagcg
     5581 cgtggttcac caacaatact ggcggcgcac ccagcatctc ctgacgggat agcgcttcct
     5641 gagtttgcgc cagtaaacga tccgccagcc ctggctccag tcctcccccg ccctgcagcg
     5701 cctgtagtaa caaacgttcc agcggtgtat cgaggccaat aacatggact tcatctttgc
     5761 caggaaacca ctgctgggta atcgcccgtc ccaacgccac gcgcacgacg gcggttaatt
     5821 catgtggatc gctttggatg ggcgcatgtt ccgccagcgt ttcgagaatg gtgcgcatat
     5881 cgcgaatcgg tactttttca tcgaggagat tttgcagcac tttatgcagt gtggtgagcg
     5941 tgacgacgcc aggaacgaga tcttccgtca gctttggcat ctcctgggcg acgcgatcca
     6001 acagctgttg cgcctcctga cgaccaaaca gctctgcggc atgctggcta atgaggtggt
     6061 taagatgcgt tgctaccacc gtgctggcct caaccactgt gtacccctga atctgcgcct
     6121 gttcttttag cgcactttca atccagatag cattcaggcc aaatgccgga tcgacggtcg
     6181 cctcaccagg taacgtcccg gcagcggttc cagggttaat cgccaaccag cgccccggat
     6241 aagcatcacc actgccaatc tccacgcctt tcatcaaaat gcgatagcgg gcaggttgca
     6301 gatccatatt gtcgcgaatg tgcaccactg gcggcagaaa tcccatctcc tgggcaaatt
     6361 tcttgcggat actgcgtata cggcccaaca actcaccatc ctgctggaaa tcgaccatcg
     6421 ggatcagtcg ataacccact tccattccca gagaatcttc cagttgtaca tcgttccacg
     6481 tcgcttcgac aacggtatta ttctctgcca tttttaccgg tttgggttcg gcaggcgctt
     6541 tttgttcgca tccgcgtatc caccaggcca gccccagcaa tccggcagtg aacagcaaaa
     6601 ataccaggtt cggcattcca ggcaccaagc cgagtaaacc gagcacggcg gcgcttaaca
     6661 acataacgct tgggttactg aaaagctgat tcaccatctg ctcgccaaca tcctgatcgg
     6721 tgctgacacg cgtaacgatg acccccgcgg cggtagaaat caccagcgcc ggaatttgtg
     6781 ccaccagacc gtcgccaatg gtcaatagcg tataactttc cgccgcgtgt cccatgctca
     6841 tgccatgttg cagcacgccg accagcaacc cgccgacaac gttaatgacc atgatgagga
     6901 tcccggcgat ggcatcgccg cgaacaaact tacttgcccc gtccattgag ccgtaaaaat
     6961 cggcttcctg agtcacttcg gagcggcgtt ttttcgcctc atcttcacca atcaatccag
     7021 cgttaaggtc ggcgtcaatc gccatctgct tacccggcat accatcgaga acaaagcgcg
     7081 cacccacttc tgcgatacgc ccggcacctt tggtaatgac cataaagttg atgatcacga
     7141 gaatgacaaa caccacgata cctatagcga aattgccacc aacgaggaag tgaccgaacg
     7201 cttcgaccac cttccctgcc gccgccgcgc cggtatgccc ttccatcaaa atgatacggg
     7261 ttgaagccac gttaagtgcc agacgcaaca acgtagtaaa caacagaatg gtcggaaacg
     7321 cagcaaactc aagcgtgcgc tgggtaaaca tcgccaccag caacaccatg atcgacaagg
     7381 caatattgaa ggtaaacaac aggtcgagta tgaatgcggg cagtggcagc accatcatcg
     7441 acaagatcaa caggatcaaa atcggtccgg caaggatctg ccattgtgtc gatttcaggt
     7501 ttgcgggcag gcgcagcatc gcggccagat tactcatggg tcggtttctc gttaataaaa
     7561 tccagggctt ccggcaccgg aagatgagta ggttgtacag ggcgctgtcc accagccaga
     7621 cgccagcgtt tcagttgcca gatccaggcc agcacttccg ccaccgcggc gtacagttga
     7681 cccgggattt gttgaccaat ctccgcatgt cgatacagcg ctcgcgccag cggcggcgct
     7741 tcaagcgtcg ggacgttatt ttcagcgcca atttcacgaa tgcgcagcgc gaccagccct
     7801 gcacctttag cgaccacttt cggtgcgctc attttgtttt cgtcatactg caacgctacc
     7861 gaatagtggg tcgggttatt gacaatgaca tccgctttcg gcacatcggc catcatccga
     7921 cgccgtgcgg cagctcgctg catctgacgg atccgtcctt taacatgggg gtcgccttcg
     7981 ctttgtttga actcatcacg aatatcctgc cgcgacattc gcagcttttt caggtggctg
     8041 aagatttgga aaaagacgtc aaatcccacc attggaatga caccaagcac caccagcagt
     8101 gcgcatagcc ctaccaaatc catcgcatta cccatggcgg taatcggaga ctcggccagt
     8161 aagcgcatca tctgcggcca gtgatgccag agaaaaaacc ccgtcacgct gccaaccaag
     8221 atggttttca aaattgcttt aagcaactcc gcgccagtct gtgccgagaa catccgttta
     8281 atgcccggta gcgggttgag tttggaaaac ttcggctgca aggattttcc gctaaatacc
     8341 agccccccca gcatgaccgg agaaatgagc gctaccagca ccacgccgct aatcagcggt
     8401 agcagcgcca gcatggcttc tctgatcagc agaataatct gcccgaggat cagattcggg
     8461 tctttgataa tactgtgatc aaaatgcagc ccagcggaga gcatgcccga caatcgacgg
     8521 gccagcgaca caccgccgaa ccagataaca cacacgccca ccagcaaaat cagcagtgag
     8581 gtcagttcac gggaacgcgg gatttagggc ttttgctgcc acacatcaag catagtgtgc
     8641 gtttgtcgga tgcggcgtca tcgccttatc agaccgcctg atatgacgtg gtcacgccac
     8701 atcaggcaat acaaatcaaa atccaagact atccaacaaa tcgtccacct gatcctgact
     8761 ggctaccaca ccggctttgc tggtatcgac ctgaggtcca ttaagcaaac tctggttttc
     8821 acgttttgga cgcgactcct gttccgggat gttttccaac agcaccatca gcaactggcg
     8881 ttcgatctcc tgaatgacat ccatcatccg cttaataacc tgcccggtga gatcctgaaa
     8941 atcctgcgcc atcatgattt ccagcagttg cgcgttagta aagctggtat gcgcgggtac
     9001 atctgccaga aattgtcgtg tatctgttac cagttcacgg gcgtcggcaa ggtcaatcgg
     9061 atcggcaaac cagtcatccc aacgttgggt taacgctttt gctgatttct ccatttgatc
     9121 ctgatgcggt tgtgacgcct caacactgtt cagcgcccgc tccgcagcct gggcggtcat
     9181 ctgcacaaca tagtacaaac gatcgcgcgc atcggggatg gcttccgccg cttcggcaat
     9241 ggcctgatcc agccccagtt cccgcaaact gtcgcgcagc atacgcgtca ggctgccgat
     9301 gcgcgcaatg atatcgccag ctgaatgctc gtcagcaggt ttgattgatg gttgcatcat
     9361 agtcgcatcc tcacatgtcc agtttatcaa agattttgtt gagtttttcc tccagcgtcg
     9421 cggcggtaaa tggcttcacc acatagccac tggcccccgc ttgcgccgca gcaatgatgt
     9481 tctctttctt cgcttctgca gtcaccatta acactggcaa tgccgacatc gcgccatccg
     9541 cacgaattgt tttcagcaat tccaggccat ccatattggg catgttccag tcggagataa
     9601 caaatccata accgcctgcc tgcaacttat tgagagcgtc gacgccatct tccgcttcct
     9661 caacattatt gaatcccagc tctttcagca ggttacgcac tatgcgtcgc atggtggaaa
     9721 agtcatccac aaccaaaaat ttaagttctt tatccgccat ttcacactcc tgatttaaat
     9781 acgtatcgcc tgtccggcac taatttttgc caacatttgc tggcttacct ggctaagatc
     9841 gaccacttcg cagacaccac ccatattgat ggcctcgcgc ggcatgccga acaccacgca
     9901 acttgcttcg ttttgcgcaa gggtccatgc ccccgcctga cgcatcgcca acattcccac
     9961 cgggccgtcg tgaattttga tttgataatt tgcgccacta cgcgccagtt ccatatgccg
    10021 atcgcccggc gcaatatagg catgccccgg caagacacgt tctccgtctt cggcttcttt
    10081 aaccccgatc tggcaaagct tattaagtct gtcggcaaaa gagcgggtga aaccgggcgg
    10141 catatgttgg gtaattaaca atgccgggct ggaaagcggc aacggttgca gtacgtgacg
    10201 aattgcctca gttccacccg ttgaagcacc aatcgcaatc agtttttcag aactcaacaa
    10261 cggacccgcc ttcagcgttg tcggtgctga caatggctta tgtgctgcaa ggctcgcctt
    10321 tgctgccgta cgcacctttt cagcaatcat ttcgctatac gccagcattc cttcgcgaat
    10381 acccagttgc ggtttggtga caaaatctat tgcccccagc tccagcgcgc gcagcgtgac
    10441 ttctgatcct ttgccggtca aggaagaaac catcacaacg ggcattggac gcaaacgcat
    10501 taatttttcg aggaaatcca gtccgtccat ccgcggcatt tcaacatcca gcgtcagcac
    10561 atcgggattg aatttcttaa tcaagtcacg cgcgaccagc ggatcaggcg cggtcgccac
    10621 catttccatg tcgctatggc tgttgatgat ttctgtcatg atctggcgca tcagtgccga
    10681 atcatcgaca gataacaccc tgattttgct catcgttaat ccttacttag cgcatacacc
    10741 gtctgaccac gcagcgtgaa gcggcgctca aggtggctaa agttttcaga gtgacccgca
    10801 aacagcaatc cgtcgggttt aaggagcgga acaaagcggc gcaaaatctc ctgctgggta
    10861 ttttgatcga agtagatcat gacgttacga cagaagatcg catcaaacgg ccccggcacg
    10921 gtgtactgtt tcgccagtag attcagcggg gcaaaatcaa catagttcgc cagctcctga
    10981 cgcacgcgta ccagcccttc atgcggtccc gtccctcgca tgaaataccg ttgcagttgc
    11041 tgcggcgtca ggtttttcaa ctcttcatgg cgataaatac cgcttctggc tttttccagc
    11101 acttcggtgt cgatatcact ggcaaacact ttccagcgtc cgggcgcggt gcccaatgtg
    11161 tcagccagcg tcatcgcaat gctgtacggc tcttcgccgg ttgaagccgc cgcgctccat
    11221 acgcgatact cgccagaacg gcgacgtgcg tgatccgcga gcagagggaa atgatgtgcc
    11281 tcacggaaaa atgccgtcag attcgtggtc agcgaattga taaacgcctg ccactcaccg
    11341 ctgtgctgat tagattccag caagttcaga taatgaccga aatccgtcag tcccagcgaa
    11401 cgcaaacgac gaaccagtcg gttgtaaacc atgtcgcgtt tatgatcggc caggacgatc
    11461 ccggctcgtt gatagatcaa ttgacttatc cgccgaaaac tgtaccgaga acaaccaggt
    11521 aacctaataa gataagcacg acatcatcct tccactgttg accatgacag gatgttcagt
    11581 cgtcaggcgt taacgcgcga ttggggcaaa aaaaagcagc ggtacgtcgt taccgctgct
    11641 ggcatgttgc gccacaccgt atcagttaaa cagcctgtac tctctgttca tccagcagtt
    11701 gtgggataat atcggcagga ttctgggaaa gtttacgtct ttttactgcc cgggatggcg
    11761 gttgacataa gctgcaggca aagctgccaa caggctggtg agcgtgggta ataaaattgc
    11821 cgccgcagca gttgcagctg gaaagttgca gtaatccact ttcaacaaac cgccccaatg
    11881 tccaggcacg ggttaatgcc agcagtggtc cttcttctgc ttgtgggcac tgttcaaggt
    11941 ataaacggta ggctttgatc accgcatcga cgccattaca caaacctgtt ttcagtaaaa
    12001 actgccatgc attacagaac atcgaagcat gaacgttttg ttcccaggtc ataaaccagt
    12061 cggttgagaa tggcagcatg cctttcggcg gtgggcttcc gcgcagttct ttataaagtt
    12121 ttatcaggcg tccgcgactt aactgtgttt cgctttccag catctgcaaa cgagcgccca
    12181 gggtgatcaa ttcaatatcc cgcgcttcct gaacaatgct tttttcactc atgatcaggc
    12241 ccttttcttg cgcagcgctt cttcaggctg attaacatca ttcagcaagc gtgttgagag
    12301 catgatgccg gtatgaattt gctggagatc gttaacgcgg gaatcttgcg tcaactgagt
    12361 aatcgtctgg tggctgtcaa aacggaagtg acaaaccagt tgattggttt ctgccagctt
    12421 aaccatttgc ggaagagtca gtgccgctaa cgttgtcgcc atttcttcat ttatgccgag
    12481 acgaaacata gcggacgctt tgtcctgaac aatcaaacgc tgtgcaagta gtaaatatga
    12541 caagttgatg tcataaatgt gtttcagcaa ctcggaggta tgcattattc ccacccagaa
    12601 taaccaactt tatttttatg cggtttcacc gcaccccgtg atgtcgccgg gaagccccgg
    12661 taaaaaataa ttagcattag aatagtgcga taagctgcaa taagcagaac cacctttttg
    12721 gtttaatatg tccttacaaa tagaaatggg tctttacact tatctaagat ttttcctaaa
    12781 tcgacgcaac tgtactcgtc actacacgca catacaacgg aggggggctg cgattttcaa
    12841 taatgtgtga tgcagatcac acaaaacact caattactta acataaatgt ataagccata
    12901 cttttgtttt gggtgtattt caatctgtta aaaagttttt cgctacgcta gcaagcaaaa
    12961 atgaaactgg aataatcgaa atgggatgtt gcgcacagtt aaaataactc accgtaaata
    13021 atcatctgct ataaataatc actttcatgc aataccagat aagctatttt taaacagaca
    13081 cttaccgcac aacaaactaa ttaaatacaa agaaaggcaa caatcaactt aatgttaatg
    13141 aaatgtttta catatattaa ccacttgttt aatgcggaga atcagtacac tattttctta
    13201 taattacatt tgaaattata tgatcaccgg gagtgattga ttaattgtct ttactaataa
    13261 tcagactaat atttacctgt ttgaccgagt tgggattgcg tcgtttctcc attaggagta
    13321 aagctttaat gtcacctgaa gttcacagaa taaggaacag gttatgagct atagcaatat
    13381 tcttgtcgct gttgcggtta caccggaaag tcagcaactg ctggcaaaag cggtatctat
    13441 cgccaggcca gtaaagggac acatcagttt aattactctc gcttccgacc cggaaatgta
    13501 caatcaatta gccgcgccga tgcttgaaga tttacgcagc gtgatgcaag aagaaacgca
    13561 aagctttctt gataagttaa ttcaggatgc ggggtatccc gttgacaaga cgtttattgc
    13621 ctacggtgag ttaagcgaac atattctgga agtatgtcac aaacatcatt tcgatttggt
    13681 gatttgcggt aatcacaatc acagtttctt ttcgcgagca tcctgctcgg cgaaaagagt
    13741 gattgcctca agtgaggtcg atgtgctgtt agttccactt acgggtgatt aaccgctcct
    13801 acgcaagctt tggaaaggta gcaactttat cgcgctgctg gctttccgcg cttcgcggaa
    13861 ctatctgctt taggtcgcta atgaagcact cctgccagtg gttaatatcg tttttcacga
    13921 taacgtccag catttctgca tgacgggaaa tacgttccgc cagcgacata gtcaatgcac
    13981 gatccagcgc agctgcaact tcgtcacgat cgtaggggtt aacaattaac gccgacgtta
    14041 actcgtttgc cgctcccgca aattgcgaaa gaacaagaac gcccgggttg gctgggtcct
    14101 gagcagcaac atactctttt gctaccaggt tcatcccgtc acgcagtggc gtcactaagc
    14161 ccacgtcaga gtagcggaat attttcatca gtaatttacg gtcaaaatgc tgattcaaat
    14221 aataaagcgg cgtccagcct aattgcccgt atttaccatt aattcgtcca gcttcatttt
    14281 cgagctgatg acgaatatcc tgataggctt gcacatcacc acgcgacgtt ggtgcaatct
    14341 ggg
//
LOCUS       DADMJE010000105        14222 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.106, whole genome shotgun sequence.
ACCESSION   DADMJE010000105 DADMJE010000000
VERSION     DADMJE010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14222
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.106"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            505..1329
                     /gene="gadX"
                     /locus_tag="JN001_002782"
     CDS             505..1329
                     /gene="gadX"
                     /locus_tag="JN001_002782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadX"
                     /protein_id="HAY9053960.1"
                     /translation="MQSLHGNCLIAYARHKYILTMVNGEYRYFNGGDLVFADASQIRV
                     DKCVENFVLVSRDTLSLFLPMLKEEALNLHAHKKISSLLVHHCSRDIPVFQEVAQLSQ
                     NKNLRYAEMLRKRALIFALLSVFLEDEHFIPLLLNVLQPNMRTRVCTVINNNIAHEWT
                     LARIASELLMSPSLLKKKLREEETSYSQLLTECRMQRALQLIVIHGFSIKRVAVSCGY
                     HSVSYFIYVFRNYYGMTPTEYQERSAQGLPNRDSAASIVAQGNFYGTDRSAEGIRL"
     gene            1697..2425
                     /gene="gadW"
                     /locus_tag="JN001_002783"
     CDS             1697..2425
                     /gene="gadW"
                     /locus_tag="JN001_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadW"
                     /protein_id="HAY9053961.1"
                     /translation="MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFC
                     SPDTRRLDIDELTVCHYLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESG
                     VNSPILSNMLYLSCLSMFSHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAE
                     RMYTSESLIKKKLQDENTCFSKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYF
                     INTFRQYYGVTPHQFAQHSLGTFS"
     gene            complement(2788..5901)
                     /locus_tag="JN001_002784"
     CDS             complement(2788..5901)
                     /locus_tag="JN001_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HAY9053962.1"
                     /translation="MANYFIDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQIAPPTIT
                     VSATYPGADAQTVEDSVTQVIEQNMNGLDGLMYMSSTSDAAGNASITLTFETGTSPDI
                     AQVQVQNKLQLAMPSLPEAVQQQGISVDKSSSNILMVAAFISDNGSLNQYDIADYVAS
                     NIKDPLSRTAGVGSVQLFGSEYAMRIWLDPQKLNKYNLVPSDVISQIKVQNNQISGGQ
                     LGGMPQAADQQLNASIIVQTRLQTPEEFGKILLKVQQDGSQVLLRDVARVELGAEDYS
                     TVARYNGKPAAGIAIKLATGANALDTSRAVKEELNRLSAYFPASLKTVYPYDTTPFIE
                     ISIQEVFKTLVEAIILVFLVMYLFLQNFRATIIPTIAVPVVILGTFAILSAVGFTINT
                     LTMFGMVLAIGLLVDDAIVVVENVERVIAEDKLPPKEATHKSMGQIQRALVGIAVVLS
                     AVFMPMAFMSGATGEIYRQFSITLISSMLLSVFVAMSLTPALCATILKAAPEGGHKPN
                     ALFARFNTLFEKSTQHYTDSTRSLLRCTGRYMVVYLLICAGMAVLFLRTPTSFLPEED
                     QGVFMTTAQLPSGATMVNTTKVLQQVTDYYLTKEKDNVQSVFTVGGFGFSGQGQNNGL
                     AFISLKPWSERVGEENSVTAIIQRAMIALSSINKAVVFPFNLPAVAELGTASGFDMEL
                     LDNGNLGHEKLTQARNELLSLAAQSPDQVTGVRPNGLEDTPMFKVNVNAAKAEAMGVA
                     LSDINQTISTAFGSSYVNDFLNQGRVKKVYVQAGTPFRMLPDNINQWYVRNASGTMAP
                     LSAYSSTEWTYGSPRLERYNGIPSMEILGEAAAGKSTGDAMKFMADLVAKLPAGVGYS
                     WTGLSYQEALSSNQAPALYAISLVVVFLALAALYESWSIPFSVMLVVPLGVVGALLAT
                     DLRGLSNDVYFQVGLLTTIGLSAKNAILIVEFAVEMMQKEGKTPIGAIIEAARMRLRP
                     ILMTSLAFILGVLPLVISHGAGSGAQNAVGTGVMGGMFAATVLAIYFVPVFFVVVEHL
                     FARFKKA"
     gene            complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="JN001_002785"
     CDS             complement(5926..7083)
                     /gene="mdtE"
                     /locus_tag="JN001_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug transporter subunit MdtE"
                     /protein_id="HAY9053963.1"
                     /translation="MNRRRKLLIPLLFCGAMLTACDDKSAENAAAMTPEVGVVTLSPG
                     SVNVLSELPGRTVPYEVAEIRPQVGGIIIKRNFIEGDKVNQGDSLYQIDPAPLQAELN
                     SAKGSLAKALSTASNARITFNRQASLLKTNYVSRQDYDTARTQLNEAEANVTVAKAAV
                     EQATINLQYANVTSPITGVSGKSSVTVGALVTANQADSLVTVQRLDPIYVDLTQSVQD
                     FLRMKEEVASGQIKQVQGSTPVQLNLENGKRYSQTGTLKFSDPTVDETTGSVTLRAIF
                     PNPNGDLLPGMYVTALVDEGSRQNVLLVPQEGVTHNAQGKATALILDKDDVVQLREIE
                     ASKAIGDQWVVTSGLQAGDRVIVSGLQRIRPGIKARAISSSQENASTESKQ"
     gene            7143..7421
                     /locus_tag="JN001_002786"
     CDS             7143..7421
                     /locus_tag="JN001_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053964.1"
                     /translation="MRDLQTSGIVGLSASKVGYRHSDRHGEVNDKKNVAVLPTVPASI
                     RATKGSTGGYTYQGNKVVLASPLVITGGNEISICIPRHASHQFQLLMS"
     gene            complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="JN001_002787"
     CDS             complement(7422..7949)
                     /gene="gadE"
                     /locus_tag="JN001_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid resistance transcriptional activator GadE"
                     /protein_id="HAY9053965.1"
                     /translation="MIFLMTKDSFLLQGFWQLKDNHEMIKINSLSEIKKVGNKPFKVI
                     IDTYHNHILDEEAIKFLEKLDAERIIVLAPYHISKLKAKAPIYFVSRKESIKNLLEIT
                     YGKHLPHKNSQLCFSHNQFKIMQLILKNKNESNITLTLNISQQTLKIQKFNIMYKLKL
                     RRMSDIVTLGITSYF"
     gene            complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="JN001_002788"
     CDS             complement(8748..9320)
                     /gene="hdeD"
                     /locus_tag="JN001_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-resistance protein HdeD"
                     /protein_id="HAY9053966.1"
                     /translation="MLYIDKATILKFDLEMLKKHRRAIQFIAVLLFIVGLLCISFPFV
                     SGDILSTVVGALLICSGIALIVGLFSNRSHNFWPVLSGFLVAVAYLLIGYFFIRAPEL
                     GIFAIAAFIAGLFCVAGVIRLMSWYRQRSMKGSWLQLVIGVLDIVIAWIFLGATPMVS
                     VTLVSTLVGIELIFSAASLFSFASLFVKQQ"
     gene            9575..9907
                     /gene="hdeA"
                     /locus_tag="JN001_002789"
     CDS             9575..9907
                     /gene="hdeA"
                     /locus_tag="JN001_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeA"
                     /protein_id="HAY9053967.1"
                     /translation="MKKVLGVILGGLLLLPVVSNAADAQKAADNKKPVNSWTCEDFLA
                     VDESFQPTAVGFAEALNNKDKPEDAVLDVQGIATVTPAIVQACTQDKQANFKDKVKGE
                     WDKIKKDM"
     gene            10023..10349
                     /gene="hdeB"
                     /locus_tag="JN001_002790"
     CDS             10023..10349
                     /gene="hdeB"
                     /locus_tag="JN001_002790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417966.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acid-activated periplasmic chaperone HdeB"
                     /protein_id="HAY9053968.1"
                     /translation="MNISSLRKAFIFMGAVAALSLVNAQSALAANESAKDMTCQEFID
                     LNPKAMTPVAWWMLHEETVYKGGDTVTLNETDLTQIPKVIEYCKKNPQKNLYTFKNQA
                     SNDLPN"
     gene            10413..11060
                     /locus_tag="JN001_002791"
                     /pseudo
     CDS             10413..11060
                     /locus_tag="JN001_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417965.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
     gene            complement(11102..11632)
                     /locus_tag="JN001_002792"
     CDS             complement(11102..11632)
                     /locus_tag="JN001_002792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9053969.1"
                     /translation="MFLIITRDTMFFTAMKNILSKGNVVHIQNEEEIDGMLHQNAFVI
                     IDTLMNNVFHSNFLTQIERLKPVHVIIFSPFNIKRCLGKVPVTFVPRTITIIDFVALI
                     NGSYCSVPEAAVSLSRKQHQVLSCIANQMTTEDILEKLKITLKTFYCHKHNIMMILNL
                     KRINELVRHQHIDYLV"
     gene            complement(11788..12354)
                     /gene="slp"
                     /locus_tag="JN001_002793"
     CDS             complement(11788..12354)
                     /gene="slp"
                     /locus_tag="JN001_002793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein Slp"
                     /protein_id="HAY9053970.1"
                     /translation="MNMTKGALILSLSFLLAACSSIPQNIKGNNQPDIQKSFVAVHNQ
                     PGLYVGQQARFGGKVINVINGKTDTLLEIAVLPLDSYAKPDIEANYQGRLLARQSGFL
                     DPVNYRNHFVTILGTIQGEQPGFINKVPYNFLEVNMQGIQVWHLREVVNTTYNLWDYG
                     YGAFWPEPGWGAPYYTNAVSQVTPELVK"
     gene            complement(13032..13826)
                     /locus_tag="JN001_002794"
     CDS             complement(13032..13826)
                     /locus_tag="JN001_002794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000020601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053971.1"
                     /translation="MSIDFTPGIINTYHGNIYNCTTNTDNVKTPDTPKWPCDNWEEQQ
                     PINSTFSGEGYNPEQFDLAQQQLQQINACHTNTTYTNADYSKVVVQLVSLINNIETIS
                     STPLTQQTQSILNQINNIRYEKNKSAECRIIVVANPKPDKAIITKISVEEGIPITFSV
                     QTMFSDTNFIAEQRADLPTNIKDIQSLYQKMTKLYIEHSENKNRMKVFAGTNFIDFNM
                     TGQNLSGFVLTLSRFYFEDLLNINFTDANLGDTIFYIKNTLPPQII"
BASE COUNT         3947 a         3021 c         3154 g         4100 t
ORIGIN      
        1 attatgtgtc gtcgcggctt cgaaatggac tttgctgaac tgttgctgga agactacaaa
       61 gcctccctga aatatctcag cgatcacccg aaactgcagg gtattgccca gcagaacagc
      121 tttaaacaca cctgataaca taacgttgta aaaaccgaat gcccagcctt taaaaaaaca
      181 gctgggcatt cggttgctta ttaatcgcaa taatatattg gctgtctatt catcgtgttg
      241 ataagatata tgttatatga atgtttatta aatgtagcga ttgcctttaa tgtcacgaaa
      301 agggattatt tgcttgctat taatttcact gcgttcttaa acgcgttttt gtattataaa
      361 tccagtcatc ctgcccgtag aacatcacac atcatcatcc tgttctcccg cttcgtttaa
      421 atttatttat caatcaattt gacttaagag ggcggcgtgc tacattaatt aacagtaata
      481 tgtttatgta atattaagtc aactatgcaa tcattacatg ggaattgtct aattgcgtac
      541 gcaagacata aatatattct caccatggtt aatggtgaat atcgctattt taatggtggt
      601 gacctggttt ttgcggatgc aagccaaatt cgagtagata agtgtgttga aaattttgta
      661 ttagtatcaa gggatacgct ttcattattt ctgccgatgc tcaaggagga ggcattaaat
      721 cttcatgcac ataaaaaaat ttcttcatta ctcgttcatc actgtagcag agatattcct
      781 gtttttcagg aagttgcgca actatcgcag aataagaatc ttcgctatgc agaaatgcta
      841 cgtaaaagag cattaatctt tgcgttgtta tctgtttttc ttgaggatga gcactttata
      901 ccgctgcttt tgaacgtttt gcaaccgaac atgcgaacaa gagtttgtac ggttatcaat
      961 aataatatcg cccatgagtg gacactagcc cgaatcgcca gcgagctgtt gatgagtcca
     1021 agcctgttaa agaaaaaatt gcgcgaagaa gagacatcat attcacagtt gcttactgag
     1081 tgtagaatgc aacgtgcttt gcaacttatt gttatacatg gcttttcaat taagcgagtc
     1141 gcagtgtcct gtggatatca cagcgtgtcg tatttcattt acgtctttcg aaattattat
     1201 gggatgacgc ccacagagta tcaggagcga tcggcgcagg gattgccgaa ccgtgactcg
     1261 gcggcaagta ttgttgcgca aggaaatttt tacggcactg accgttctgc ggaaggaata
     1321 agattataga attttactca gacataaaaa aaacctggca taggggaccg ggaagaggat
     1381 agtctgccgt ctccagacta ataaaccgct ataacactcc ctgttggcac gggaaacttt
     1441 gtgctctcag taagttaaat ataactttta ctggaaataa gatcagccat ttttttataa
     1501 acataagcta tacgctgtgc gaaaatatat tcgtgctgca tttacttatt atcaattaac
     1561 tgttatgcaa aactactttg tggataaatt ttggtcctac caaatctggc agtttttgcg
     1621 ctaagaaaca gtctggcaac atttcattag tatactgaaa ttgaaataat cgcagtatga
     1681 aatataaggg ataatcatga ctcatgtctg ctcggtgatc ctcattcgtc gttcattcga
     1741 tatttatcat gaacagcata aaatatcgct gcataacgag agtatcgtgc tgctggagaa
     1801 aaatttggca gacgattttg cgttttgttc accggatacg cgacgactgg atatcgatga
     1861 gctgacagtt tgccattact tacaaaatat tcgtcagcta ccacgcaatt tagggttaca
     1921 tagcaaagac cgtctattaa ttaaccagtc accccccatg ccgctggtga cggcgatttt
     1981 tgatagcttc aatgaatccg gggtaaattc accgatactg agcaatatgc tctacctttc
     2041 ctgtttatcg atgttttctc ataagaaaga actgatcccc ttacttttca atagcatcag
     2101 cactgtttca ggaaaagttg aacgccttat tagctttgat atcgccaaac gttggtatct
     2161 gcgcgatatc gcggaaagaa tgtataccag cgagagtctc atcaaaaaaa agttgcagga
     2221 tgaaaatacc tgtttcagta aaatattact cgcttccagg atgtcgatgg ccagacgatt
     2281 actcgagtta cgtcaaattc ctctgcatac tattgcagaa aaatgtggct atagcagtac
     2341 gtcgtacttt ataaacacat ttcgacaata ttatggtgta acgccacatc agtttgcgca
     2401 acattcgcta ggtacctttt cctgacatat tttgcatttg aatattggtc aggatctcac
     2461 acctgcttca tgtgaaactc ttccctgatg atttctgccg ggctaccggc tagttctctt
     2521 tcgcagtttg ccaggcggta taggtatttt caggaggaaa agactcggca tgtttgggat
     2581 tattaagctg acaattcata cgattacggg aatgtgggtc agtattgtgc tgttcaaatt
     2641 gatgacgaat ggctggagtg gtttctactt tcagtgctgt gtactaagcc tggtattcct
     2701 gacggttagc tggttgttga gtggtgaatg gttagcagga aagagtaagg ctgaaccttc
     2761 acgttcaacc ttactctcat ttacacgtta cgctttttta aagcgggcaa agagatgttc
     2821 cactacaacg aaaaagaccg gaacgaagta aattgccagc actgttgcgg caaacatccc
     2881 gcccatcacg ccggtaccta ccgcgttttg cgcgccagaa ccggcaccat gactgataac
     2941 cagcggcagc acgccgagaa taaaggccag agaggtcatc aggattgggc gtaaacgcat
     3001 ccgcgccgct tcgatgattg cccctatcgg cgttttccct tctttctgca tcatctcaac
     3061 ggcaaattcg acaatcagga tggcgttctt ggcggaaagc ccgatggtgg tcagcaaacc
     3121 aacctggaag tagacgtcat tacttaagcc gcgcagatcg gtggccagta atgcgccaac
     3181 gacgcctaac ggaacaacca acatcaccga gaacggaatt gaccagctct catagagtgc
     3241 ggcgagggcg aggaacacca cgaccagtga aatggcatac agtgcaggag cctggtttga
     3301 ggataacgct tcctgatacg acagtccggt ccatgagtag ccgacgcctg ccggaagttt
     3361 agcgaccagg tctgccataa atttcatagc gtcaccggta cttttcccgg ccgccgcttc
     3421 acctaaaatc tccattgacg ggatgccgtt gtagcgttcc aatcgcggtg aaccataggt
     3481 ccattcggta gacgagtagg cagaaagcgg tgccatcgtg ccagaggcgt tgcgtacata
     3541 ccattggttg atgttatccg gcaacatacg gaacggcgtg cctgcctgga catacacttt
     3601 tttcacccgc ccctggttga ggaagtcgtt cacgtagctg ctgccgaagg cggtggaaat
     3661 tgtctggttg atatcagaca gcgccacacc cattgcctca gctttcgcgg cgttgacgtt
     3721 cactttgaac atcggcgtat cttccaggcc gttcgggcgt accccggtga cctggtcagg
     3781 cgattgcgct gccagtgata acagctcgtt tcgtgcctgg gttagttttt cgtgccccag
     3841 gttaccgttg tccagcagtt ccatatcaaa acctgacgcg gtacccagtt cagccaccgc
     3901 gggtaagttg aacgggaaga cgacggcttt attgatactg cttaacgcaa tcattgcccg
     3961 ctgaatgatc gcggtaaccg agttttcctc accgacacgt tcagaccacg gcttgagact
     4021 gataaacgcc aggccgttgt tttgcccctg gccgctgaag ccaaagccgc caacggtaaa
     4081 caccgactga acattatctt tctcttttgt aagataataa tccgtcacct gttgcagcac
     4141 tttcgtggtg ttaaccatgg tggcaccgga aggtaactgc gcggtggtca taaatacccc
     4201 ctgatcctct tctggtaaga aagaggtcgg tgtacgcagg aacagcaccg ccatcccggc
     4261 gcaaatcagc aggtagacca ccatgtagcg accggtacaa cgcaacagcg agcgggtgct
     4321 atcggtatag tgctgagttg atttttcaaa cagcgtgttg aagcgtgcga acagggcgtt
     4381 aggtttgtga ccgccttccg gcgcggcttt cagaatggtg gcgcacaggg caggggtcag
     4441 gctcattgcc acaaatactg aaagcagcat ggaggagatc agcgtgatgg agaactggcg
     4501 gtagatctcc ccggttgcgc cgctcataaa ggccatcggc ataaacactg cggaaagaac
     4561 aacagcaata ccgaccagcg cacgttggat ctgccccatc gatttatgcg tcgcttcctt
     4621 cggtggtagc ttatcttccg caatgacacg ctcgacgttc tccaccacca cgatggcgtc
     4681 atccaccagt aaccctatcg ccagcaccat cccgaacata gttaacgtgt tgatggtgaa
     4741 accgaccgcc gacaagatcg caaacgtccc gagaataacc accggtacgg caatcgtcgg
     4801 gatgattgtg gcacggaaat tctgcaaaaa cagatacatg accaggaaga cgaggatgat
     4861 agcctcaacc agtgttttaa aaacttcctg aatagaaatt tcgataaacg gcgtggtgtc
     4921 gtaaggataa accgtcttca gacttgcggg gaaataggct gataagcggt tcagctcctc
     4981 tttgactgcc cgcgaggtat ccagggcgtt tgctccggta gccagtttga tggcgatccc
     5041 ggcagcaggt ttgccgttat agcgcgccac ggtggaataa tcttccgctc caagttcgac
     5101 gcgggcgaca tcacgcagca gcacttgcga accatcttgc tgaactttca acaggatttt
     5161 gccaaattct tccggcgttt gcagacgcgt ctgcacaatg atcgaggcgt ttagttgctg
     5221 gtctgccgcc tgtggcatgc cacccagttg accaccggaa atctggttgt tttgcacctt
     5281 aatctgggaa ataacatcgg aaggtaccag attgtattta ttgagttttt gcgggtccag
     5341 ccagatacgc atggcgtact cggaaccaaa gagctgtacg ctaccaacgc ccgcggtacg
     5401 gcttagcggg tctttgatat tagacgctac atagtccgcg atatcgtact ggttgaggct
     5461 gccgttatca gaaataaacg ccgctaccat cagaatatta ctgctcgact tatcaacgct
     5521 aatcccctgc tgctgcaccg cttcaggtaa tgaaggcata gcgagttgca gtttattttg
     5581 cacctgaacc tgtgcgatat caggagatgt cccagtctcg aaggtcagag tgatagaggc
     5641 attacccgcc gcatcactgg ttgaagacat gtacatcagg ccatcaagcc cattcatatt
     5701 ttgctcaatc acctgagtga ccgagtcttc taccgtttgc gcatcggcac ctggataggt
     5761 agcgctgacg gtaatggtcg gtggcgcaat ctgcggatac tgcgcaaccg gtaagttcat
     5821 gatcgccaga ccacctgcaa gcatcataat aatggcaagt acccaggcaa aaaccgggcg
     5881 atcaataaaa tagttagcca tgaaagtccc cttaagcctg caacgttatt gtttcgattc
     5941 ggtgctggcg ttttcctggc tggaggaaat tgctcgtgct ttgatacccg gacgaatgcg
     6001 ttgcaaaccg gaaacgatca cccgatcgcc agcctgcaag ccagaggtga caacccactg
     6061 gtcgccgatg gctttgctgg cttcaatttc gcgtagctgc acaacatcgt ctttatccag
     6121 aatgagcgcc gttgctttac cctgggcgtt gtgggtgacg ccttcctgcg gcaccagtaa
     6181 tacattctgg cggctacctt catccactaa tgccgtgacg tacatgccag gcagcaagtc
     6241 accatttggg ttggggaaaa tcgcccgtaa cgtcacggag cccgtggttt catccaccgt
     6301 cgggtcggag aatttcagtg tgccggtctg gctgtagcgt ttaccatttt ccagattgag
     6361 ctgtactggc gtactgccct gaacctgttt gatttgccca ctggcgacct cttctttcat
     6421 gcgcaagaaa tcctgcaccg actgcgtgag atcgacataa atcgggtcca gacgttgtac
     6481 ggtaaccagc gaatctgcct gattagcggt aacgagtgcg ccgacggtca ccgacgattt
     6541 cccgctgacg cccgtaatcg gcgaggtgac attcgcgtat tgcagattga tcgtcgcctg
     6601 ttcaacagcc gctttggcga cggtgacatt ggcttctgct tcattcagct gggtgcgcgc
     6661 ggtgtcgtaa tcctgacggc taacgtagtt ggtcttcagc aacgatgcct ggcggttaaa
     6721 ggtgatgcgg gcattgctgg cggtagagag cgctttcgcc agcgagcctt tggcggagtt
     6781 tagctcggcc tgtaaaggtg caggatcaat ctgatacagc gaatcgccct ggttcacttt
     6841 atcgccttcg ataaagttgc gtttaatgat aataccgccc acctggggac gtatctcggc
     6901 aacttcataa ggaacggttc taccgggcaa ttcgctcaac acattgaccg aaccggggga
     6961 gagtgtgacg acaccgacct caggcgtcat ggcggcggcg ttttccgccg atttgtcatc
     7021 gcaggcggtg agcatcgcgc cgcagaataa caacggtatt aacagctttc ttcttctgtt
     7081 cattttagtc cctgaaaatt cttgagaaat aacggttctt taaattgcgc gcgaggagag
     7141 atatgaggga tttacagacc agcggcatag tggggttgtc agccagtaag gtgggataca
     7201 ggcacagtga tcgacatggt gaggtcaacg acaaaaaaaa tgttgccgtt ctgccaacag
     7261 ttcctgccag cattcgggca acgaagggtt ctactggtgg atacacatac caggggaata
     7321 aagtcgtttt agcctctcct ttagtaatca ccgggggtaa tgaaatcagc atctgcatcc
     7381 ctcgtcatgc cagccatcaa tttcagttgc ttatgtcctg actaaaaata agatgtgata
     7441 cccagggtga cgatgtcgct catacgtctt agtttcaact tgtacataat gttgaatttc
     7501 tgaatcttta atgtttgttg cgaaatattg agcgtcaacg tgatattgct ttcattttta
     7561 tttttcagaa tcagttgcat aattttgaac tgattatgtg aaaaacataa ttgtgaattc
     7621 ttatggggca agtgtttacc ataagtaatc tcaagaagat ttttgatact ttctttgcgg
     7681 ctaacaaaat aaataggcgc tttagctttt agtttactga tgtgataagg tgccaaaaca
     7741 ataattctct cggcatctaa tttctccaga aatttaatcg cttcttcatc aaggatatga
     7801 ttgtgatagg tatcaatgat aaccttgaag ggtttattgc ctactttttt gatctctgac
     7861 agggaattga tttttatcat ttcgtgatta tctttcaact gccaaaagcc ctgtaaaaga
     7921 aaagaatctt tcgtcatgag aaaaatcata acttgctcct tagccgttat cgtttcgaac
     7981 atgtcatcct tttcattatt tacatccttg tccgaatcgt tgttcaatat agtaaacgcc
     8041 tataagaact ttacccttcg tgaactaata cgtctattaa cactaatcaa tacttcagat
     8101 ttatccatca cgcactccat atattgatcc taagtaagat tcctggttgt tatcagcttg
     8161 taaatagtaa acaaaaagtt aacgtttgcg gattactgcc caagaataag ttatcaataa
     8221 ccagtttgtg atctctgaag aatattacta aagttaaaat gtaatccgat ttaaatatcg
     8281 agtctccttg tttcgactta agctggcaat tggattgcca gctttctttt aacgcattga
     8341 aattacctga gtaaataacg cattcatgtc ttcaggtttt tatatagcgt ctggagacac
     8401 ggatatttat gcaatgtaat caacgccagt tgcaaaaaaa tgaacccgga ttacttattt
     8461 aaccgcccat agcatcaacg cttacggaac tctttgttca ctttcccaca gcacttttaa
     8521 aacattaaac ctgactacgg aaaatatcag ccatgataat gtttgaaatg gctaatttgc
     8581 catggagtga aaaaaattag atgaaattca gtaggttgaa ataatcacta gcaggtaatt
     8641 atttcaatga tagtgcgcaa ttgatctaca acactgcgta gcggagagag tattaatcgg
     8701 atcatagtca catcaagtga ctatgatccg ggtgacaacc ggggtaatta ttgctgctta
     8761 acgaacaaac tggcgaagct gaacaggctg gcggcgctaa atatcagttc aattcccacc
     8821 agtgtggaaa ccagcgttac agacaccatc ggcgttgcac caaggaatat ccaggcaatg
     8881 acgatatcca gcacaccaat aacgagctgt agccagctgc ctttcattga acgctgacga
     8941 taccaactca tcaggcgaat aacccctgca acacagaaca aaccggcaat aaatgccgca
     9001 atggcaaaaa tgcccagctc cggtgcgcgg atgaagaaat agccgatcaa taaataggcg
     9061 actgcgacga ggaaaccgga taataccggc cagaaattat gactgcggtt gctgaataac
     9121 ccgacaataa gcgcaatacc cgagcagatt aataatgcac ccactactgt gcttaaaata
     9181 tcgccagaga cgaacgggaa actgatacac agcaacccga cgataaacag cagcacggca
     9241 ataaactgga ttgctctgcg atgtttttta agcatctcca gatcaaactt caaaattgtt
     9301 gccttatcta tatataacat agaaccaccc tataaaatta agaagaaaat cccctgctat
     9361 caatctatgc caaaaacgcg tctaagaatg cagtcgattt aataaaaatt tcctaattgc
     9421 agtatctgat gcatctgtaa ctcattgtat tgaaataaaa atatctgatt ttgatatttt
     9481 ccatcaacat gacatataca gaaaaccagg ttataacctc agtgtcgaaa ttgatttgtg
     9541 acggctcttt cactttatag ttgaggatat tacgatgaaa aaagtattag gcgttattct
     9601 tggtggtctg cttcttctgc cagttgtgag caatgcagcg gatgcgcaaa aagcagctga
     9661 taacaaaaaa ccggtcaact cctggacctg tgaagatttc ctggctgtgg acgaatcctt
     9721 ccagccaact gcagttggtt ttgctgaagc gctgaacaac aaagataaac cagaagatgc
     9781 ggttttagat gttcagggta ttgcaaccgt aaccccagct atcgttcagg cttgtactca
     9841 ggataaacaa gccaacttta aagataaagt taaaggcgaa tgggacaaaa ttaagaaaga
     9901 tatgtaattc cgggaatgcg ttacatcgta cttccttgca tattgaacag gccggaatat
     9961 cttctttaaa agcagctatt cctcctgttc atatataatc tatatattga atgggttaca
    10021 aaatgaatat ttcatctctc cgtaaagcgt ttatttttat gggcgctgta gcggctttgt
    10081 cactggtgaa cgcacaatct gcgctggcag ccaatgaatc cgctaaagat atgacctgcc
    10141 aggaatttat tgatctgaat ccaaaagcaa tgaccccggt tgcatggtgg atgctgcatg
    10201 aagaaacagt atataaaggt ggcgataccg ttactttaaa tgaaaccgat ctcactcaaa
    10261 ttcctaaagt gatcgaatac tgtaagaaaa acccgcagaa aaatttgtat accttcaaaa
    10321 atcaagcatc taatgacttg ccgaattaat gaggtacaag taaaaaggag tagcaagttg
    10381 agccatcttg ctgctccttt ttgcattttt atatgacagc agaatttatt atacgtctta
    10441 tactcgcggc aattgcctgt ggcgctattg gcatggaaag gcaaatgtga ggcaaaggag
    10501 cagggttacg cacacatgta ttaattggca tgggaagcgc cctgtttatg attgtttcga
    10561 aatatggttt tgctgacgtg ctgtctttag atcacgtcgg actcgacccc agccgtattg
    10621 ctgctcaggt ggtgacgggc gtcgggttta tcggtgcagg taacattctc gttcgtaacc
    10681 aaaatattgt aggtttgacg acggcagcgg atatctggat gaccgccgct ataggtatgg
    10741 ttattggcag tggtatgtac gaattgggta tgtatggttc agtgatgacc ttgctggtgc
    10801 tggaagtctt ccatcaatta accttccgcc tgatgaacaa aaattaccat ttacagctga
    10861 cattagtgaa cggtaatacg gtatcaatgc tcgactggtt taagcagcaa aaaataaaaa
    10921 cggatttagt ttcgttgcag gaaaatgaag atcatgaagt ggtcgccatt gatatccagc
    10981 ttcatgccac aacgtcgata gaagatctgt tgcgattatt aaaaggtatg gcaggggtga
    11041 aaggcgtttc aattagctaa tctgtgtggc agcgtagtca gactcaccgt aagcctgaaa
    11101 ttcacaccag ataatcaata tgctgatggc gtaccagctc attgatccgc ttaagattga
    11161 ggatcatcat gatattgtgt ttatggcagt agaacgtttt tagcgttatt ttcagtttct
    11221 ccagaatatc ctccgttgtc atttgattcg caatgcagct cagaacctga tgttgcttgc
    11281 gcgaaagtga cacagccgct tcaggcacag agcagtaact gccattgatg agtgcgacaa
    11341 aatcgatgat agtgatagtc cgcggaacaa aggtcaccgg cactttcccc aggcagcgtt
    11401 taatattaaa gggggagaaa ataatcacat ggacaggttt taatcgttca atttgagtga
    11461 gaaaattaga atgaaataca ttattcatta atgtatcaat aatgacaaag gcattctgat
    11521 gcaacattcc gtcgatctct tcttcgttct gtatatgaac gacattacct ttgctcaaaa
    11581 tgtttttcat cgcggtgaag aacatcgtat ccctggtaat tataagaaac ataaccgact
    11641 cctggtgcgg acattaattt tataatcagt ttgccaaagg taattaacag gacagggctt
    11701 ataataataa tagttagctt gctgtgtatt aattttatgt aatgcacgat gcagatgctg
    11761 agaaagcatc tgcatctttc ggtggtgtta tttgaccagc tcaggtgtta cctgactcac
    11821 cgcattggtg tagtaaggcg caccccagcc cggttccggc cagaatgcac catagccgta
    11881 atcccatagg ttataggtgg tattaaccac ttctctcaaa tgccacacct ggatgccctg
    11941 catattcact tccaggaagt tatacgggac tttattgata aagccaggtt gttcaccctg
    12001 aatggtaccg aggatggtaa caaagtgatt acgatagttc actgggtcaa ggaagccgct
    12061 ttgtctggcg agcagtcggc cctgatagtt ggcttcaata tcaggtttcg catagctatc
    12121 caacggtaat acagcgattt ctaacaacgt atccgttttg ccattgataa cgttgataac
    12181 cttcccacca aagcgcgctt gttgaccaac atataacccc ggctggttat gaacagcaac
    12241 aaaacttttt tgaatatcag gttggttatt gcctttgata ttttgcggaa ttgaactaca
    12301 tgcggcaagc aaaaatgaaa ggctgaggat gagtgcacct tttgtcatgt tcatgttact
    12361 atccttatca acaaatatta aaaccataat agatatttct ttatagtttt catctgattc
    12421 tgaggcgata tgcctgatag taacgtaaac ctgtctgatg tttatatccc ttttgtttag
    12481 ttcaattcca ttgattttgg ggcgtggcat aagtatccat cgccccataa tataatcctt
    12541 tgttttaaaa ttacataaaa tctattttta ttcaataatt ataaagtgct aataatcaat
    12601 attatggtat tatattctga taatgatttg ataagcgaat tcttttgcca gatggtattt
    12661 ctatttccac cccataattt atatcttttt cattaggaag tggcctcttt aaataaggcg
    12721 tgtgtgacat tttttttggg ttaagcgtct cgaattgaaa tacttcgaac tgatattcag
    12781 acatttctgc ccatgtttga attttattgt atcgagagag tgtcgtagag gctttaactt
    12841 gcttataaca ttgtttttgg aattcttgct gatattttaa tatgtcattg tatgaaagat
    12901 tggttatcct ggcctctaaa aatttaatta ttgtcgaagc aatttccgct tttgctcgta
    12961 aaaagttgtc attaatggtt aataatgttg aaaataaacc ttcgatttgt ttgtcaagat
    13021 attgtccatc tttatataat ttgggggggt agggtgttct ttatgtaaaa aatagtgtca
    13081 cctaaatttg cgtcagtgaa atttatatta agtagatctt cgaaataaaa ccttgacaag
    13141 gttagaacga acccggaaag gttctgtcct gtcatattga aatcaataaa gttggttccg
    13201 gcaaagactt tcatcctgtt tttattttca ctgtgctcaa tatataactt cgtcattttt
    13261 tgatacaggc tttgaatatc ttttatatta gttggtaagt cagctcgttg ttcagcaata
    13321 aaattagtat ctgaaaacat ggtttggaca ctgaatgtta tgggtattcc ctcttctacg
    13381 ctaattttag ttatgattgc cttgtcgggt ttaggattag cgacaacaat gattcgacat
    13441 tcagcacttt tgtttttttc atatctaatg ttattaatct gattaagtat tgattgtgtc
    13501 tgttgcgtaa gtggtgtcga acttatcgtt tcaatgttat taataagact tacaagttga
    13561 accacaactt ttgagtagtc tgcatttgta tatgtggtgt tcgtgtggca tgcattaatt
    13621 tgttggagtt gttgttgcgc taaatcaaat tgttcagggt tgtatccttc tccagagaat
    13681 gtggaattaa tgggttgttg ttcttcccaa ttatcacaag gccacttcgg tgtgtctggc
    13741 gttttaacat tatcggtatt tgttgtgcag ttataaatat tgccgtgata tgtatttatt
    13801 atacctgggg taaagtcaat tgacataaca ttccttattc atcatctgtt ttatgctaag
    13861 gtttttaaat tggataatta gaacaggaat ggattttctt ctacacacaa taaatataat
    13921 gcgttatatc ttcctgatat aattaccttt aaattccctt tcatttccac ccggtaatat
    13981 ttgtgtataa aaaaagcagt gatagtatcg taaaggaaaa cgttaacaac tatcaaaaag
    14041 cgctcatttt aaaaagttat tatgttctcc gatagtgtgt gaagtaatat ttttgtgatg
    14101 ttttagatgt gtaataatga accaggttaa agtgtattta aaaatgtgtt gtattagcga
    14161 ctgaaatctg ccttttaaaa aggaggaggg tactgagaca aagagtcatt gcttctccga
    14221 ta
//
LOCUS       DADMJE010000106        14198 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.107, whole genome shotgun sequence.
ACCESSION   DADMJE010000106 DADMJE010000000
VERSION     DADMJE010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 14198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14198
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.107"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(92..388)
                     /locus_tag="JN001_002795"
     CDS             complement(92..388)
                     /locus_tag="JN001_002795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9053972.1"
                     /translation="MRFLLANTFCKIVKQFSFIDRIRIYSLHPCLNKHLSIQSNRDWL
                     SMSIFSDYSFSIEMHNNLTIDYYLALSSTKGSGITNIISIILQQAQDYDVAKIT"
     gene            672..2303
                     /gene="oppA"
                     /locus_tag="JN001_002796"
     CDS             672..2303
                     /gene="oppA"
                     /locus_tag="JN001_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707150.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter substrate-binding
                     protein OppA"
                     /protein_id="HAY9053973.1"
                     /translation="MTNITKRSLVAAGVLAALMAGNVALAADVPAGVTLAEKQTLVRN
                     NGSEVQSLDPHKIEGVPESNISRDLFEGLLVSDLDGHPAPGVAESWDNKDAKVWTFHL
                     RKDAKWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDL
                     GVKAIDDHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYT
                     LKDWVVNERIVLERSPTYWNNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMPI
                     ELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTALKLGMDRDIIVNKVKA
                     QGDMPAYGYTPPYTDGAKLTQPEWFGWSQEKRNEEAKKLLAEAGYTADKPLTINLLYN
                     TSDLHKKLAIAASSLWKKNIGVNVKLVNQEWKTFLDTRHQGTFDVARAGWCADYNEPT
                     SFLNTMLSNSSMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPV
                     YYYVNARLVKPWVGGYTGKDPLDNTYTRNMYIVKH"
     gene            2389..3309
                     /gene="oppB"
                     /locus_tag="JN001_002797"
     CDS             2389..3309
                     /gene="oppB"
                     /locus_tag="JN001_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppB"
                     /protein_id="HAY9053974.1"
                     /translation="MLKFILRRCLEAIPTLFILITISFFMMRLAPGSPFTGERTLPPE
                     VMANIEAKYHLNDPIMTQYFSYLKQLAHGDFGPSFKYKDYSVNDLVASSFPVSAKLGA
                     AAFFLAVILGVSAGVIAALKQNTKWDYTVMGLAMTGVVIPSFVVAPLLVMIFAIILHW
                     LPGGGWNGGALKFMILPMVALSLAYIASIARITRGSMIEVLHSNFIRTARAKGLPMRR
                     IILRHALKPALLPVLSYMGPAFVGIITGSMVIETIYGLPGIGQLFVNGALNRDYSLVL
                     SLTILVGALTILFNAIVDVLYAVIDPKIRY"
     gene            3324..4232
                     /gene="oppC"
                     /locus_tag="JN001_002798"
     CDS             3324..4232
                     /gene="oppC"
                     /locus_tag="JN001_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000979653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptide ABC transporter permease OppC"
                     /protein_id="HAY9053975.1"
                     /translation="MMLSKKNSETLENFSEKLEVEGRSLWQDARRRFIHNRAAVASLM
                     VLVLIALFVILAPMLSQFAYDDTDWAMMSSAPDMESGHYFGTDSSGRDLLVRVAIGGR
                     ISLMVGVAAALVAVVVGTLYGSLSGYLGGKVDSVMMRLLEILNSFPFMFFVILLVTFF
                     GQNILLIFVAIGMVSWLDMARIVRGQTLSLKRKEFIEAAQVGGVSTSGIVIRHIVPNV
                     LGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLSDGANSMEVSPWLLLFPA
                     GFLVVTLFCFNFIGDGLRDALDPKDR"
     gene            4244..5257
                     /gene="oppD"
                     /locus_tag="JN001_002799"
     CDS             4244..5257
                     /gene="oppD"
                     /locus_tag="JN001_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppD"
                     /protein_id="HAY9053976.1"
                     /translation="MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNF
                     SLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLR
                     AEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARK
                     RMKMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREF
                     NTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLD
                     AEGETMLTIPGNPPNLLRLPKGCPFQPRCPHAMEICSSAPPLEEFTLGRLCACFKPVE
                     ELL"
     gene            5254..6258
                     /gene="oppF"
                     /locus_tag="JN001_002800"
     CDS             5254..6258
                     /gene="oppF"
                     /locus_tag="JN001_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide/oligopeptide ABC transporter
                     ATP binding protein OppF"
                     /protein_id="HAY9053977.1"
                     /translation="MNAVTEGRKVLLEIADLKVHFEIKDGKQWFWQPPKTLKAVDGVT
                     LRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGHVAWLGKELLGIKPDEWRAVRSD
                     IQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKMSRQEVRERVKAMMLKVGLLPNLINR
                     YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSL
                     IFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHNPLHPYTRALMSAVPIPDPDLE
                     KNKTIQLLEGELPSPINPPSGCVFRTRCPIAGPECAKTRPVLEGSFRHAVSCLKVDPL
                     "
     gene            complement(6311..6640)
                     /locus_tag="JN001_002801"
     CDS             complement(6311..6640)
                     /locus_tag="JN001_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309775.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciU family protein"
                     /protein_id="HAY9053978.1"
                     /translation="MDMDLNNRLTEDETLEQAYDIFLELAADNLDPADVLLFNLQFEE
                     RGGAELFDPVEDWQEHVDFDLNPDFFAEVVIGLADSEDGEINDVFARILLCREKDHKL
                     CHIIWRE"
     gene            complement(6675..8135)
                     /gene="cls"
                     /locus_tag="JN001_002802"
     CDS             complement(6675..8135)
                     /gene="cls"
                     /locus_tag="JN001_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HAY9053979.1"
                     /translation="MTTVYTLVSWLAILGYWLLIAGVTLRILMKRRAVPSAMAWLLII
                     YILPLVGIIAYLAVGELHLGKRRAERARAMWPSTAKWLNDLKACKHIFAEENSSVAAP
                     LFKLCERRQGIAGVKGNQLQLMTESDDVMQALIRDIQLARHNIEIVFYIWQPGGMADQ
                     VAESLMAAARRGIHCRLMLDSAGSVAFFRSPWPELMRNAGIEVVEALKVNLMRVFLRR
                     MDLRQHRKMIMIDNYIAYTGSMNMVDPRYFKQDAGVGQWIDLMARMEGPIATAMGIIY
                     SCDWEIETGKRILPPPPDVNIMPFEQASGHTIHTIASGPGFPEDLIHQALLTAAYSAR
                     EYLIMTTPYFVPSDDLLHAICTAAQRGVDVSIILPRKNDSMLVGWASRAFFTELLAAG
                     VKIYQFEGGLLHTKSVLVDGELSLVGTVNLDMRSLWLNFEITLAIDDKGFGADLAAVQ
                     DDYISRSRLLDARLWLKRPLWQRVAERLFYFFSPLL"
     gene            8278..8451
                     /locus_tag="JN001_002803"
     CDS             8278..8451
                     /locus_tag="JN001_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciY family protein"
                     /protein_id="HAY9053980.1"
                     /translation="MKRSRTEVGRWRMQRQASRRKSRWLEGQSRRNMRIHSIRKCILN
                     KQRNSLLFAIYNI"
     gene            complement(8506..9759)
                     /gene="kch"
                     /locus_tag="JN001_002804"
     CDS             complement(8506..9759)
                     /gene="kch"
                     /locus_tag="JN001_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="voltage-gated potassium channel protein"
                     /protein_id="HAY9053981.1"
                     /translation="MSHWATFKQTATNLWVTLRHDILALAVFLNGLLIFKTIYGMSVN
                     LLDIFHIKAFSELDLSLLANAPLFMLGVFLVLNSIGLLFRAKLAWAISIILLLIALIY
                     TLHFYPWLKFSIGFCIFTLVFLLILRKDFSHSSAAAGTIFAFISFTTLLFYSTYGALY
                     LSEGFNPRIESLMTAFYFSIETMSTVGYGDIVPVSESARLFTISVIISGITVFATSMT
                     SIFGPLIRGGFNKLVKGNNHTMHRKDHFIVCGHSILAINTILQLNQRGQNVTVISNLP
                     EDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCLAILALSDNDADNAFVVLSAKD
                     MSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNGEEINNDMLVSMLL
                     NSGHGIFSDNDEQETKADSKESAQK"
     gene            complement(10059..10355)
                     /locus_tag="JN001_002805"
     CDS             complement(10059..10355)
                     /locus_tag="JN001_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009448315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HAY9053982.1"
                     /translation="MLYVIYAQDKADSLEKRLSVRPAHLARLQLLHDEGRLLTAGPMP
                     AVDSNDPGAAGFTGSTVIAEFESLEAAQAWADADPYVAAGVYEHVSVKPFKKVF"
     gene            10570..11298
                     /gene="tonB"
                     /locus_tag="JN001_002806"
     CDS             10570..11298
                     /gene="tonB"
                     /locus_tag="JN001_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707161.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein TonB"
                     /protein_id="HAY9053983.1"
                     /translation="MTSMTLDLPRRFPWPTLLSVCIHGAVVAGLLYTSVHQVIELPAP
                     AQPISVTMVAPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK
                     PKPVKKVQEQPKRDVKPVESRPASPFENTALARLTSSTATAATSKPVTSVASGPRALS
                     RNQPQYPARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRY
                     EPGKPGSGIVVNILFKINGTTEIQ"
     gene            complement(11338..11736)
                     /gene="yciA"
                     /locus_tag="JN001_002807"
     CDS             complement(11338..11736)
                     /gene="yciA"
                     /locus_tag="JN001_002807"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioester hydrolase YciA"
                     /protein_id="HAY9053984.1"
                     /translation="MSTTHNVPQGDLVLRTLAMPADTNANGDIFGGWLMSQMDIGGAI
                     LAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVQKGTTSVSINIEVWVKKVASE
                     PIGQRYKATEALFKYVAVDPEGKPRALPVE"
     gene            complement(11841..12380)
                     /locus_tag="JN001_002808"
     CDS             complement(11841..12380)
                     /locus_tag="JN001_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HAY9053985.1"
                     /translation="MKQFLDFLPLVVFFAFYKIYDIYAATAALIVATAIVLIYSWVRF
                     RKVEKMALITFVLVVVFGGLTLFFHNDEFIKWKVTVIYALFAGALLVSQWVMKKPLIQ
                     RMLGKELTLPQPVWSKLNLAWAVFFILCGLANIYIAFWLPQNIWVNFKVFGLTALTLI
                     FTLLSGIYIYRHMPQEDKS"
     gene            complement(12410..13153)
                     /locus_tag="JN001_002809"
     CDS             complement(12410..13153)
                     /locus_tag="JN001_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0259 family protein"
                     /protein_id="HAY9053986.1"
                     /translation="MSITAQSVYRDTGNFFRNQFMTILLVSLLCAFITVVLGHVFSPS
                     DAQLAQLNDGVPVSGSSGLFDLVQNMSPEQQQILLQASAASTFSGLIGNAILAGGVIL
                     IIQLVSAGQRVSALRAIGASAPILPKLFILIFLTTLLVQIGIMLVVVPGIIMAILLAL
                     APVMLVQDKMGIFASMRSSMRLTWANMRLVAPAVLSWLLAKTLLLLFASSFAALTPEI
                     GAVLANTLSNLISAVLLIYLFRLYMLIRQ"
     gene            complement(13181..13270)
                     /locus_tag="JN001_002810"
                     /pseudo
     CDS             complement(13181..13270)
                     /locus_tag="JN001_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460692.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YkgJ family cysteine cluster protein"
     gene            13510..14148
                     /gene="ompW"
                     /locus_tag="JN001_002811"
     CDS             13510..14148
                     /gene="ompW"
                     /locus_tag="JN001_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein OmpW"
                     /protein_id="HAY9053987.1"
                     /translation="MKKLTVAALAVTTLLSGSAFAHEAGEFFMRAGSATVRPTEGAGG
                     TLGSLGGFSVTNNTQLGLTFTYMATDNIGVELLAATPFRHKIGTRATGDIATVHHLPP
                     TLMAQWYFGDASSKFRPYVGAGINYTTFFDNGFNDHGKEAGLSDLSLKDSWGAAGQVG
                     VDYLINRDWLVNMSVWYMDIDTTANYKLGGAQQHDSVRLDPWVFMFSAGYRF"
BASE COUNT         3826 a         3318 c         3474 g         3580 t
ORIGIN      
        1 cgcagttatc aaaagcaaaa ggaataggta aaaatattct tctcaaatta cagttagtta
       61 taaggatttt cttaactgct tctcctcacc atcatgttat tttcgccaca tcataatcct
      121 gggcttgctg aagaataatt gaaatgatat tagtaattcc actgcctttg gtagaggaaa
      181 gtgctaaata ataatcaatt gttaaattat tgtgcatttc aatactgaaa ctgtaatcag
      241 aaaagataga catgcttagc caatctctat ttgattgaat tgaaagatgt ttgttaaggc
      301 atggatgcaa gctatagatt ctgatacggt caataaaaga gaattgctta acaattttgc
      361 aaaatgtatt ggcgagtaag aaccgcattt agtactttcc gggcaaccgc cagacgattc
      421 tttattggta atgagaataa ttaacaatta aagagcgtcg cgaaagaata atgtgtctcg
      481 acaggggaga cacagtacga atcgacataa ggtgatcgtc tgaatcacca gaataaataa
      541 agtcggtgat agcaatccgt aacgataaag taacctgaca gcagaaagtc tccgagcctg
      601 tgcagggtcc caatccggga ttacacatgc tggttaatac cagtaattat aatgagggag
      661 tccaaaaaac aatgaccaac atcaccaaga gaagtttagt agcagctggc gttctggctg
      721 cgctaatggc agggaatgtc gcgctggcag ctgatgtacc cgcaggcgtc acactggcgg
      781 aaaaacaaac gctggtacgt aacaatggtt cagaagttca gtcattagat ccgcacaaaa
      841 ttgaaggtgt tccggagtct aatatcagcc gagacctgtt tgaaggctta ctggtcagcg
      901 atcttgacgg tcatccggca cctggcgtcg ctgaatcctg ggataataaa gacgcgaaag
      961 tctggacctt ccatttgcgt aaagatgcga aatggtctga tggtacgcca gtcacagcac
     1021 aagactttgt gtatagctgg caacgttctg ttgatccgaa cactgcttct ccgtatgcca
     1081 gttatctgca atatgggcat atcgccggta ttgatgaaat tcttgaaggg aaaaaaccga
     1141 ttaccgatct cggtgtgaaa gctattgatg atcacacatt agaagtcacc ttaagtgaac
     1201 ccgttccgta cttctataaa ttacttgttc acccatcaac ttcaccggtg ccaaaagccg
     1261 ctatcgagaa attcggcgaa aaatggaccc agcctggtaa tatcgtcacc aacggtgcct
     1321 ataccttaaa agattgggtc gtaaacgaac gaatcgttct tgaacgcagc ccgacctact
     1381 ggaacaacgc gaaaaccgtt attaaccagg taacctattt gcctattgct tctgaagtta
     1441 ccgatgtcaa ccgctaccgt agtggtgaaa tcgacatgac ttataacaac atgccgatcg
     1501 aattgttcca gaagctgaaa aaagagatcc cggacgaagt tcacgttgat ccatacctgt
     1561 gcacttacta ttacgaaatt aacaaccaga aaccgccatt caacgatgtg cgtgtgcgta
     1621 ccgcactgaa actaggtatg gaccgcgata tcattgttaa taaagtgaaa gcgcagggcg
     1681 acatgcccgc ctatggttac actccaccgt atactgatgg cgcaaaattg actcagccgg
     1741 aatggtttgg ctggagccag gaaaaacgta acgaagaagc gaaaaaactg ctggctgaag
     1801 ctggttatac cgcagacaaa ccgttgacaa tcaacctgtt gtataacacc tccgatctgc
     1861 ataaaaagct ggcgattgct gcctcttcat tgtggaagaa aaacattggt gtaaacgtca
     1921 aactggttaa ccaggagtgg aaaacgttcc tcgacacccg tcaccagggt acttttgatg
     1981 tggcccgtgc aggctggtgt gctgactaca acgaaccaac ttccttcctg aacaccatgc
     2041 tttcgaacag ctcgatgaat accgcgcatt ataagagccc ggcctttgac agcattatgg
     2101 cggaaacgct gaaagtgact gacgaggcgc agcgcacagc tctgtacact aaagcagaac
     2161 aacagctgga taaggattcg gccattgttc ctgtttatta ctacgtgaat gcgcgtctgg
     2221 tgaaaccgtg ggttggtggc tataccggca aagatccgct ggataatacc tatacccgga
     2281 atatgtacat tgtgaagcac taatggcaat acgtggggca ggagtgtcct gctccacggt
     2341 gtctgatttt tatcgcatta cagaaggcac aggccagaag gtagggcaat gttaaaattt
     2401 attctacgtc gctgtctgga agcgattccg acgctattta ttcttattac tatttcgttc
     2461 tttatgatgc gcctcgcgcc gggaagccct tttaccggcg aacgtacttt accgccagaa
     2521 gtgatggcca atatcgaagc gaaatatcat cttaatgatc cgatcatgac acagtatttc
     2581 agctacctga aacaactggc gcacggtgat ttcggtccat cgtttaaata taaagattat
     2641 tcggtcaatg acttggttgc atccagtttt cccgtttctg ccaaactggg agccgcagca
     2701 tttttccttg cggtaatact gggtgttagt gctggcgtta ttgccgcatt aaaacaaaac
     2761 accaaatggg actataccgt gatggggctg gcaatgaccg gggttgttat ccccagtttt
     2821 gtggttgcac cattattagt catgatattt gcgatcattt tgcattggct gccgggcggt
     2881 ggctggaatg gtggggcgct taaattcatg atattgccga tggtggcgtt gtcactcgct
     2941 tatatcgcca gtattgcgcg tattacccgt ggctctatga ttgaagtatt acactccaat
     3001 tttattcgta ctgcccgggc gaaagggtta cctatgcggc ggatcatttt acgtcacgca
     3061 ttaaaacctg ctctgttacc cgtgctctct tatatgggcc ccgcatttgt cggcattatt
     3121 accggttcta tggttatcga aaccatttat ggtttgccgg ggattggaca actgttcgtt
     3181 aatggcgcat tgaaccgtga ctattcctta gtgttaagcc tgaccatcct ggttggtgct
     3241 ttaaccattt tgtttaatgc cattgtcgat gtgctatatg cggttatcga cccgaaaatc
     3301 cgttactgat actggagctc gcgatgatgt taagtaagaa aaacagcgag acgctggaaa
     3361 atttcagtga aaagctggag gtcgaagggc gcagcttgtg gcaggacgca cgtcgacgtt
     3421 ttattcataa ccgtgcggcg gttgccagtc tgatggtgct ggtgctgatc gcgttatttg
     3481 taatcctggc accgatgctt tcccagtttg cctatgacga tactgactgg gcgatgatgt
     3541 ccagcgcccc ggatatggag tccggtcact actttggtac tgactcatcc ggtcgcgacc
     3601 tgcttgtgcg cgttgcgatt ggtgggcgta tctcactcat ggtcggtgtt gctgcggcac
     3661 tggtggctgt ggtcgtcggg acactttatg gttcgctttc cggttatctg ggcggtaaag
     3721 tggattcggt aatgatgcgt ctgctggaaa tcctcaactc cttcccattc atgttcttcg
     3781 tcattttgct ggtgaccttt ttcggtcaaa acatcctgct gattttcgtg gcgataggca
     3841 tggtttcctg gctggatatg gctcgtattg tgcgtgggca aaccctgagt ctgaagcgca
     3901 aagagtttat tgaggcggca caagttggcg gtgtatcgac atcgggcatt gttattcgcc
     3961 acattgtgcc gaatgtactc ggtgtggtgg tggtctacgc atcacttctg gtgcccagca
     4021 tgatcctctt tgaatctttc cttagcttcc tggggttggg tacgcaagag ccgttaagca
     4081 gctggggtgc attgctgagt gatggcgcga actcgatgga agtctctcca tggttattgt
     4141 tgttcccagc gggattcctc gtggtgacgc tgttttgttt caactttatc ggcgatggct
     4201 tgcgtgatgc cctcgacccg aaagatcgtt aaggagtgca gccatgagcg taattgaaac
     4261 tgcaactgtg ccgctcgcac aacaacaggc tgacgcactg ctgaacgtga aagatttgcg
     4321 tgtcaccttt agtaccccgg acggcgacgt cacggcggtc aatgatttga atttttccct
     4381 acgtgccgga gaaacgctgg gtattgtagg tgagtctggt tcgggtaaat cgcaaactgc
     4441 atttgcgttg atgggcctgt tggctgccaa cggacgtatt ggcggatcgg caaccttcaa
     4501 tgggcgtgaa atcctcaatt tgccagagca tgaactcaat aaactgcgcg ctgaacaaat
     4561 ctcaatgatt tttcaggacc caatgacttc gttgaatccc tatatgcgcg tcggtgagca
     4621 gttgatggaa gtgctgatgc tgcataagaa catgagcaaa gctgaggcgt ttgaagagtc
     4681 ggtgcggatg ctcgatgcgg taaaaatgcc ggaagcacgt aaacgcatga aaatgtaccc
     4741 gcacgagttt tctggcggca tgcgtcagcg agttatgatt gcgatggcat tgctatgtcg
     4801 acctaagctg ctgattgcgg atgaacccac tacagcgctg gacgtcaccg tacaggcgca
     4861 gatcatgacg ctattaaatg aactgaaacg ggaatttaat accgccatca ttatgattac
     4921 ccacgatctt ggcgtggtgg cggggatctg tgacaaagtg ctggtaatgt acgccgggcg
     4981 cacgatggaa tatggcaacg cgcgcgatgt cttttatcaa cccgttcatc cttattctat
     5041 cggtttgctc aacgcggtgc cgcgtctcga tgcggaaggt gaaacaatgt tgaccatccc
     5101 gggtaatccg ccaaacctgc tgcgattacc gaaaggttgc ccgttccagc cacgttgtcc
     5161 gcatgcgatg gaaatttgta gtagcgcacc gccgctggaa gagtttacgc ttggccgtct
     5221 gtgtgcttgc tttaaaccgg tggaggaact gttatgaatg ctgtaaccga aggaagaaaa
     5281 gtcctccttg aaatcgccga tctgaaagtg cactttgaaa tcaaagatgg caaacagtgg
     5341 ttctggcaac cgccgaaaac gctcaaagcc gtcgatggtg tcacgcttcg cctgtatgaa
     5401 ggggaaacat taggtgtggt aggggaatcg ggatgcggta agtccacctt tgctcgcgcc
     5461 atcattggcc tggttaaagc gaccgacggt catgttgcct ggttaggtaa agagttgctg
     5521 ggcattaagc ccgatgaatg gcgtgccgtt cgcagtgata ttcagatgat tttccaggat
     5581 ccgttggcat cgctaaaccc gcgcatgacc atcggcgaga tcatcgctga accactgcgt
     5641 acttatcatc cgaaaatgtc acgtcaggaa gttcgcgagc gcgtgaaggc gatgatgctg
     5701 aaagtcgggt tattgcctaa cctgattaac cgctatccgc atgagttctc cggtgggcag
     5761 tgccagcgta tcgggattgc tcgtgctctt attcttgaac cgaagctgat tatctgtgat
     5821 gagccggtgt cggcgctgga cgtgtcaatt caggcgcagg tggtcaacct gctccagcag
     5881 ctgcaacgtg agatgggatt gtcattaatt tttattgctc atgacctggc cgtggtaaaa
     5941 cacatttccg atcgtgtgtt ggtgatgtat ctcggccatg cggtagaact ggggacctat
     6001 gatgaggtct accacaatcc actacatcct tacaccaggg cattgatgtc ggcagtcccc
     6061 atacctgatc cggatctgga gaagaacaaa accatccagt tactggaagg ggaattaccg
     6121 tcgccgatca acccgccttc cggttgtgtt ttccgtaccc gttgcccgat tgccggtccg
     6181 gagtgcgcca aaacacgtcc tgtgctggaa gggagtttca gacacgccgt ttcttgcctg
     6241 aaagtcgatc cgctttaaac acaataaggg ctgacagttg tcagcccttt ttcacgccga
     6301 aagcgattat ttattcccgc cagatgatat ggcaaagttt gtgatctttt tcgcggcata
     6361 acagaatgcg ggcgaaaaca tcgttgattt caccatcctc actgtccgcc agaccaatca
     6421 ccacttcggc aaaaaagtcc gggttcaaat cgaaatcaac atgttcctgc cagtcttcca
     6481 ccggatcgaa taactccgcg ccgccgcgct cttcaaactg aagattgaac agcagaacat
     6541 cagctgggtc gagattgtcg gcagccagtt cgagaaaaat atcgtaggcc tgctcaagcg
     6601 tttcatcttc agtcaggcga ttgtttagat ccatatccat agtcactacc tgtttaacct
     6661 ctgttggaga cgttttacag caacgggctg aagaagtaaa acagtcgctc ggcgacacgt
     6721 tgccataatg gacgttttag ccataaacgg gcatcgagca gacgtgaacg cgaaatataa
     6781 tcgtcctgaa cggcggcaag gtctgcacca aaacctttat cgtcgattgc cagggtaatc
     6841 tcgaaattca gccacagact acgcatatca aggttaacgg tgccaaccag acttagttcg
     6901 ccatcgacca gcacgctctt ggtatgcagt aacccgcctt caaactgata aattttaacc
     6961 ccagcagcaa gaagttccgt aaagaatgcg cgactggccc agccgaccag catcgagtca
     7021 ttttttcgcg gaaggataat actgacatcc accccgcgct gtgccgccgt gcaaatcgca
     7081 tgaagtaaat catcgcttgg cacaaagtag ggcgtggtca tgatcaaata ttcacgcgcc
     7141 gaataagccg cagtcaataa tgcctggtga atgagatctt ccggaaagcc ggggccagaa
     7201 gcaattgtgt gaatggtgtg accgctggcc tgttcaaacg gcataatatt gacatctggt
     7261 ggtggcggca gaatacgttt tccggtttca atctcccagt cgcaggaata aataatcccc
     7321 atcgcggtgg cgatggggcc ttccatacgc gccatcagat caatccattg ccctacgccc
     7381 gcatcttgtt tgaagtagcg aggatcgacc atattcatgc tgccggtgta cgcgatgtaa
     7441 ttatcgatca tgatcatctt gcgatgttgg cgcaggtcca tacggcgtaa aaacacacgc
     7501 atcagattga cctttaaggc ttcgaccact tcaataccgg cattacgcat tagctcgggc
     7561 cacgggctgc ggaaaaaagc cacactcccg gcggagtcga gcatcaatcg gcaatgaatg
     7621 ccgcgtcgcg cagcggccat taatgattca gccacctggt ccgccatgcc gccgggctgc
     7681 cagatataaa acacaatctc aatattatgg cgcgcgagct ggatgtcgcg gattaacgcc
     7741 tgcatcacat catctgactc ggtcatcagt tgtagctgat tccctttgac cccagcgatc
     7801 ccctgacgac gctcgcaaag cttgaataat ggcgcagcga cactgctatt ttcttcggcg
     7861 aagatatgct tacaggcttt aaggtcgtta agccattttg cggtggaagg ccacatcgct
     7921 ctggcgcgct cagcgcggcg tttgcctaaa tggagctcgc caacggcaag ataggcaata
     7981 attccgacta acggcagaat gtaaataatc aacagccagg ccatcgcgga gggaactgcg
     8041 cgtcgtttca ttagaatgcg taaagttacg cctgcaatga gcaaccagta tcccagaatg
     8101 gccaaccaac tcaccaacgt ataaacggtt gtcatagatt agaaatcctt ttgaaagcgc
     8161 attgttatga gtttacgcat atggattcat ctggcaaata aaaacgcggg aaaagcactg
     8221 gtcagcgtcg ggggcggggg tataatgacc attctgttat tgcatagagt agttaacatg
     8281 aagcggagta gaacggaagt ggggcgctgg cgcatgcagc gtcaggctag ccgacgtaaa
     8341 tcgcgttggc ttgaggggca atcgcgccga aatatgcgta tccacagcat caggaagtgc
     8401 attctaaaca aacagcgtaa ctcgttattg tttgcgatct acaatatcta aatgtactgg
     8461 gcaccattgc ggtgcccaat aagtttactc ctccatcttt aaactctatt tttgcgccga
     8521 ttctttactg tcagctttcg tttcttgttc atcgttatcg ctgaaaatgc catgaccgga
     8581 gttcaacaac attgaaacga gcatatcatt attaatctct tcaccattta aaactcgcgc
     8641 cagaatttcg ctgccaaaca gttgcggtga gagaatgata tccggatgta ccatcttaat
     8701 cttattcagg tttttgctat cactgacggc gagaactgtt ttgacatcac tgctcatatc
     8761 ttttgccgag agtacaacaa acgcgttatc tgcatcgtta tcactcagcg ccagaatggc
     8821 caggcaacga tcgattcccg ctttctttaa tactgaactg tcattactgt caccggggat
     8881 aacatcagcg ttatcgccta agcgttgctc aagttgcttg atatcatctt caggcaagtt
     8941 gctgataacc gttacgtttt gtccgcgttg attcagttgc agaatcgtat tgatggcgag
     9001 aatcgaatgt ccgcaaacaa taaaatgatc tttacgatgc attgtatgat tgtttccttt
     9061 tacaagtttg ttgaatcccc cgcggataag cggaccaaaa attgaggtca tagatgtggc
     9121 aaaaacggta ataccggaaa taatgaccga aatagtgaac aatcgtgctg attcagaaac
     9181 agggacaata tcgccatagc cgacggttga catggtttct atcgaaaaat agaacgcggt
     9241 catcaaactt tctattcgcg gattaaaacc ttcgcttaaa taaagcgcac cgtaggttga
     9301 gtaaaacagt aatgtcgtga aactaataaa tgcaaaaatt gtcccggctg cggcgctact
     9361 gtgggagaag tctttgcgca gtatcagcaa aaacaccagc gtaaaaatgc aaaatccaat
     9421 actaaatttc aaccagggat aaaaatgcag ggtataaatt agcgctatca acaacaaaat
     9481 gatactgatt gcccatgcga gctttgcccg gaacagtaag ccaatggagt tcaggacaag
     9541 aaagacgccg agcataaata gtggggcgtt tgccagcaag gagagatcca actctgaaaa
     9601 tgctttgata tggaaaatat ctagcaaatt gaccgacata ccatagattg ttttaaaaat
     9661 aagcaatcca tttaaaaaga cggccagcgc gagaatgtcg tgccgtaggg tcacccataa
     9721 atttgttgct gtttgtttga atgtagccca gtgactcact gatacctctg taaccacaat
     9781 tttgtttaat tatcttagcg tgcacatttt ctgaacatac atgcagcgcg tgaatgtgtt
     9841 aaacaatagt agatgacttt atccgcagta atcaaaggtt ttgagcgagc aactgtacct
     9901 caggaaaggt catttttcct gaatatgctc acatcatata aagaaataca gataaagtta
     9961 ttatctgctt gtggtggtga atgcactgac cggctataag gaaaggccaa acaagaacac
    10021 ggttgcaaaa accgtgccct taaatattga atctctattc agaacacttt cttaaatggt
    10081 ttcactgaaa cgtgttcata gactcctgcc gctacgtacg ggtcagcatc ggcccaggcc
    10141 tgagctgctt ccagcgattc aaattcagca ataacggttg agccagtaaa tcccgcagcc
    10201 cctggatcgt tactgtctac cgctggcatt ggaccagctg tcaacaaacg accttcatca
    10261 tgcagtaact gtaaacgtgc taaatgtgcc ggacgaacgg aaaggcgttt ttcgaggcta
    10321 tcagctttgt cttgagcgta aataacatac aacacgggca caactccttg ttcgggaaag
    10381 ttgtaaagta cgttatttga aagggcgaag atctgcaacg gaaagatgat gtctttgtta
    10441 agaccatgca taaagtaagg ttaattacgg caaaaatgac attttcactg atcctgatcg
    10501 tcttgcctta ttgaatatga ttgctatttg catttaaaat cgaggcttgg tttttctact
    10561 gaaatgatta tgacttcaat gacccttgat ttacctcgcc gcttcccctg gccgacgtta
    10621 ctttcggtct gcattcatgg tgctgttgtg gcgggtctgc tctatacctc ggtacatcag
    10681 gttattgaac tacctgcgcc tgcgcagcca atttctgtca cgatggttgc gcctgctgat
    10741 ctcgaaccgc cacaagccgt tcagccgcca ccggagccgg tggtagagcc agaaccggaa
    10801 cctgagccga tccccgaacc gccaaaagaa gcaccggtgg tcattgaaaa gccgaagccg
    10861 aaacctaagc caaaaccgaa gccggtgaaa aaggtacagg agcagccaaa acgcgatgtc
    10921 aaacccgtag agtcgcgtcc ggcatcaccg tttgaaaata cggcactggc acgcctgaca
    10981 tcaagtacag caacggctgc aaccagcaag ccggttacca gtgtggcttc aggaccacgc
    11041 gcattaagcc gtaatcagcc gcagtatccg gcacgagcac aggcattgcg cattgaaggg
    11101 caggttaaag ttaaatttga cgtcacgccg gatggtcgcg tggataacgt acaaatcctc
    11161 tcagccaagc ctgcgaacat gtttgagcgt gaggtgaaaa atgcgatgcg cagatggcgt
    11221 tatgagccgg gtaagccagg cagtgggatt gtggtgaata tcctgtttaa aattaacggc
    11281 accaccgaaa ttcagtaagc agaaagtcaa aagcctccga ccggaggctt ttgactatta
    11341 ctcaacaggt aaggcgcgag gttttccttc aggatcaacc gcgacatact taaataatgc
    11401 ttctgtcgct ttatagcgtt gcccgattgg ttcagacgct acttttttca cccacacttc
    11461 aatattaatg ctgaccgatg tcgtcccttt ctggacacag cgtgcatagc agcacactac
    11521 atcgccgacc gcaaccggcc gtaagaaagt cattccttca acccgcacgg tcactacgcg
    11581 accgtgggca atttctttcg ccagaatagc gccgccaata tccatttgtg acattaacca
    11641 accaccaaag atgtcaccat tggcattggt atcggcgggc atggctaaag tacgtaaaac
    11701 aagatcgccc tgagggacgt tatgtgttgt agacatggta aaaccgactt aaaaggaaaa
    11761 tcacaggcgc gatgctacta tgattttcct gaggagaaca gaggagatac agcgccagcc
    11821 ccgaaggact ggcagtctgg ttaggattta tcttcctgcg gcatgtggcg gtagatatag
    11881 ataccgctta acaatgtgaa gattaaggta agggcggtca gtccaaagac tttaaagttg
    11941 acccaaatat tttgcggcag ccagaatgcg atgtagatgt ttgccagacc gcaaaggata
    12001 aagaaaacag cccaggccag attcagcttc gaccataccg gttgcggcag cgtgagttct
    12061 ttacccagca tccgctgaat tagcggcttt ttcatcaccc attggctgac taacagggct
    12121 cccgcaaaca gagcataaat gactgtaacc ttccatttaa taaactcatc attgtggaag
    12181 aacagcgtca agccaccgaa gacgaccacc agaacaaaag tgatcagggc catcttctca
    12241 accttacgaa agcgaaccca gctatagata agcacaatcg ccgtggcgac gatcagcgcc
    12301 gcagtagccg catagatgtc ataaatcttg taaaacgcga aaaagacaac cagcggtaaa
    12361 aaatcaagaa actgcttcat tttacgattc cgtaatcaaa tgcttaaggt tattggcgaa
    12421 tcaacatata cagacggaac agatagatga gcaatacggc tgaaatcagg ttgctcaagg
    12481 tgttcgccag tacggcacca atttccgggg ttaatgcggc aaaagaagag gcaaaaagca
    12541 gcaacagtgt ttttgccagc aaccagctca gtactgcggg tgccaccaga cgcatattcg
    12601 cccaagtcag ccgcatactg ctacgcatcg aggcaaaaat gcccattttg tcctgtacca
    12661 gcatcaccgg tgccagggcc agtaaaatgg ccatgataat tcccggaacg accactagca
    12721 tgatgccaat ctgtactaaa agggtagtca gaaaaatcag aataaataac tttggcaata
    12781 tcggtgcact ggcaccaata gctcgcagcg cactgactct ctgacccgca gacaccagct
    12841 ggataattaa tattacgcct ccggcgagaa tggcgttacc gattaatcct gaaaaagtgg
    12901 acgccgctga agcctgcagc aaaatttgtt gctgttccgg tgacatattc tgaaccaggt
    12961 cgaacaaccc actactgccg ctaacgggca cgccgtcatt gagctgcgca agctgtgcat
    13021 cactgggtga gaaaacatgc cctaacacca ctgtgataaa cgcacatagc aacgatacca
    13081 acagaatggt cataaattga ttacggaaga aatttccggt gtcacggtat acggactgcg
    13141 ccgtgataga catgcactct ccttgagttt tatgcaggtg ttaattagcg ggcaattgta
    13201 ccctggttaa gcctcgggtg gcagcatcag gtcttgtatg gaaaagcata tctttgtaaa
    13261 gcggaggtaa ttgctggcct tcaggcgtgg gcaaaccgcg gcaagtggcg atcgagttaa
    13321 tatttgcgta gcgaaaatat ttaaaaattg atttaaatca cgttaaccag gattctcaat
    13381 gcaacttcta aattaatcca gatcaataaa gggtgaatta tcatatgtaa tgtgatctat
    13441 gtaggatcat ttgttactcc aatgtaggta tattcgtcac gtttttataa ccataacgac
    13501 ggagcggata tgaaaaagtt aacagtggcg gctttggcag taacaactct tctctctggc
    13561 agtgcctttg cgcatgaagc aggcgaattt tttatgcgtg caggttctgc aaccgtacgt
    13621 ccaacagaag gtgctggtgg tacgttagga agtctgggtg gattcagcgt gaccaataac
    13681 actcaactgg gcttgacgtt tacttatatg gcgaccgaca acattggtgt ggaattactg
    13741 gcagcgacgc cgttccgcca taaaatcggc acccgggcga ccggcgatat tgcaaccgtt
    13801 caccatctgc cgccaacact gatggcgcag tggtattttg gtgatgccag cagcaaattc
    13861 cgtccttacg ttggggcagg tattaactac accaccttct ttgataatgg atttaacgat
    13921 catggcaaag aggcagggct ttccgatctc agtctgaaag attcctgggg agctgccggg
    13981 caggtggggg ttgattatct gattaaccgt gactggttgg ttaacatgtc agtctggtac
    14041 atggatatcg ataccaccgc caattataag ctgggcggtg cacagcaaca tgatagcgta
    14101 cgcctcgatc cgtgggtgtt tatgttctca gcaggatatc gtttttaatt ccgcacaaaa
    14161 acgaccccgt aatatacggg gtcaataagg acatggca
//
LOCUS       DADMJE010000107        13638 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.108, whole genome shotgun sequence.
ACCESSION   DADMJE010000107 DADMJE010000000
VERSION     DADMJE010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13638)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13638)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13638
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.108"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..1867)
                     /locus_tag="JN001_002812"
                     /pseudo
     CDS             complement(1..1867)
                     /locus_tag="JN001_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311868.2"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine decarboxylase"
     gene            2265..2963
                     /locus_tag="JN001_002813"
     CDS             2265..2963
                     /locus_tag="JN001_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HAY9053988.1"
                     /translation="MVIGPFINASAVLLGGVLGALLSQRLPERIRISMTSIFGLASLG
                     IGILLVVKCANLPAMVLATLLGALIGEICLLEKGVNTAVAKAQNLFRHSRKKPTHESF
                     IQNYVAIIVLFCASGTGIFGAMNEGMTGDPSILIAKSFLDFFTAMIFACSLGIAVSVI
                     SIPLLIIQLTLAWAAALILPLTTPSMMADFSAVGGLLLLATGLRICGIKMFPVVNMLP
                     ALLLAMPLSAAWFA"
     gene            3069..3144
                     /locus_tag="JN001_002814"
     tRNA            3069..3144
                     /locus_tag="JN001_002814"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3102..3104,aa:Phe,seq:gaa)
     gene            complement(3293..3829)
                     /locus_tag="JN001_002815"
     CDS             complement(3293..3829)
                     /locus_tag="JN001_002815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HAY9053989.1"
                     /translation="MLRDKFIHYFQQWRERQLSRGEHWLAQHLAGRSPREKGMLLAAV
                     VFLFSVGYYVLIWQPLSERIVQQETMLQQLVAMNTRLRSAAPDIIAARKSATTTPAQV
                     SRVISDSASAHSVVIKRIAERGENIQVWIDPVVFNDLLNWLNALDEKYALRVTQIDAS
                     AAEKTGMVNVQRLEFGRG"
     gene            complement(3831..5009)
                     /gene="gspL"
                     /locus_tag="JN001_002816"
     CDS             complement(3831..5009)
                     /gene="gspL"
                     /locus_tag="JN001_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000097227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspL"
                     /protein_id="HAY9053990.1"
                     /translation="MSSILEIFFPLCAADPIHWQRRTPDVEHGIWSDVANEQLQQWLQ
                     TDAIRLYIPGEWISVWQVELPDVARKQIPTILPALLEEELNQDIDELHFAPLNIDQQL
                     ATVAVIHQQHMRNIAQWLQENGITRATVAPDWMSIPCGVMAGDAQRVICRIDECRGWS
                     AGRALAPVMFRAQLNEQDLPLSLTVVGIAPEKLSAWAGADAERLTVTALPAVTTYGEP
                     EGNLLTGPWQPRVSYRKQWARWRVMILPILLILVALAVERGVTLWSVSEQVAQSRTQA
                     EEQFLTLFPEQKRIVNLRSQVTMALKKYRPQADDTRLLAELSAIASTLKSASLSDIEM
                     RGFTFDQKRQILHLQLRAANFASFDKLRSALATDYVVQQDALQKEGDAVSGGVTLRRK
                     "
     gene            complement(5006..5983)
                     /gene="gspK"
                     /locus_tag="JN001_002817"
     CDS             complement(5006..5983)
                     /gene="gspK"
                     /locus_tag="JN001_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001554494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspK"
                     /protein_id="HAY9053991.1"
                     /translation="MITSPPKRGMALVVVLVLLAVMMLVTITLSGRMQQQLGRTRSQQ
                     EYQQALWYSASAESLALSALSLSLKNEKRVHLAQPWASGPRFFPLPQGQIAVTLRDAQ
                     ACFNLNALAQPTTASRPLAVQQLIALISRLDVPAYRAELIAESLWEFIDEDRSVQTRL
                     GREDSEYLARSVPFYAANQPLADISEMRVVQGMDAGLYQKLKPLVCALPMIRQQININ
                     TLDVTQSVILEALFDPWLSPVQARALLQQRPAKGWEDVDQFLAQPLLADVDERTKKQL
                     KTVLSVDSNYFWLRSDITVNEIELTMNSLIVRMGPQHFSVLWHQTGESE"
     gene            complement(5986..6585)
                     /gene="gspJ"
                     /locus_tag="JN001_002818"
     CDS             complement(5986..6585)
                     /gene="gspJ"
                     /locus_tag="JN001_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001255030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspJ"
                     /protein_id="HAY9053992.1"
                     /translation="MRRTRAGFTLLEMLVAIAIFASLALMAQQVTNGVTRVNSAVADH
                     DQKLNLMQQTMSFLTHDLTQMMPRPVRGDQGQREPALLAGAGVLASESEGMRFVRGGV
                     VNPLMRLPRSNLLTVGYRIHDGYLERLAWPLTDAAGSVKPTMQKLIPADSLRLQFYDG
                     TRWQESWSSVQAIPVAVRMTLHSPQWGEIERIWLLRGPQ"
     gene            complement(6582..6953)
                     /gene="gspI"
                     /locus_tag="JN001_002819"
     CDS             complement(6582..6953)
                     /gene="gspI"
                     /locus_tag="JN001_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspI"
                     /protein_id="HAY9053993.1"
                     /translation="MKRGFTLLEVMLVLAIFALAATAVLQIASGALSNQHVLEEKTVA
                     GWVAENQTALLYLMTREQRAVRHQGESDMAGSRWYWRTIPLNTGNALLQAVDIEVSRH
                     EDFSSVIQSRRAWFSAVGGQQ"
     gene            complement(7013..7513)
                     /gene="gspH"
                     /locus_tag="JN001_002820"
     CDS             complement(7013..7513)
                     /gene="gspH"
                     /locus_tag="JN001_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001115132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system minor pseudopilin GspH"
                     /protein_id="HAY9053994.1"
                     /translation="MPERGFTLLEIMLVIFLIGLASAGVVQTFATDSEPPAKKAAQDF
                     LTRFAQFKDRAVIEGQTLGVLIDPPGYQFMQRRQGQWLPVSATRLSAQVTVPKQVQML
                     LQPGSDIWQKEYALELQRRRLTLHDIELELQKEAKKKTPQIRFSPFEPATPFTLRFYS
                     AAQNAC"
     gene            complement(7517..7972)
                     /gene="gspG"
                     /locus_tag="JN001_002821"
     CDS             complement(7517..7972)
                     /gene="gspG"
                     /locus_tag="JN001_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003912123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system major pseudopilin GspG"
                     /protein_id="HAY9053995.1"
                     /translation="MNSLSRTHKPRAGFTLLEVMVVIVILGVLASLVVPNLLGNKEKA
                     NRQKAISDIVALENALDMYRLDNGRYPTTEQGLEALIQQPANMADSRNYRTGGYIKRL
                     PKDPWGNDYQYLSPGEKGLFDVYTLGADGQENGEGAGADIGNWNLQEFQ"
     gene            complement(7989..9212)
                     /gene="gspF"
                     /locus_tag="JN001_002822"
     CDS             complement(7989..9212)
                     /gene="gspF"
                     /locus_tag="JN001_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001173399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system inner membrane protein
                     GspF"
                     /protein_id="HAY9053996.1"
                     /translation="MALFYYQALERNGRKTKGMIEADSARHARQLLRGKELIPVHIEA
                     RMNASAGGMLQRRRHAHRRVAAADLALFTRQLATLVQAAMPLETCLQAVSEQSEKLHV
                     KSLGMALRSRIQEGYTLSDSLREHPRVFDSLFCSMVAAGEKSGHLDVVLNRLADYTEQ
                     RQRLKSRLLQAMLYPLVMLVVATGVVTILLTAVVPKIIEQFDHLGHALPSSTRALIAM
                     SDALQASGVYWLAGLLALLVLGQWLLKNPTMRLRWDKTLLRLPVTGRVARGLNTARFS
                     RTLSILTASSVPLLEGIQTAAAVSANRYVEQQLLLAADRVREGSSLRAALAELRLFPP
                     MMLYIIASGEQSGELETMLEQAAVNQEREFDTQVGLALGLFEPALVVMMAGVVLFIVI
                     AILEPMLQLNNMVGM"
     gene            complement(9212..10704)
                     /gene="gspE"
                     /locus_tag="JN001_002823"
                     /pseudo
     CDS             complement(9212..10704)
                     /gene="gspE"
                     /locus_tag="JN001_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001525635.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system ATPase GspE"
     gene            complement(10704..12764)
                     /gene="gspD"
                     /locus_tag="JN001_002824"
                     /pseudo
     CDS             complement(10704..12764)
                     /gene="gspD"
                     /locus_tag="JN001_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020234996.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system secretin GspD"
     gene            complement(12794..13623)
                     /gene="gspC"
                     /locus_tag="JN001_002825"
                     /pseudo
     CDS             complement(12794..13623)
                     /gene="gspC"
                     /locus_tag="JN001_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016238556.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein GspC"
BASE COUNT         3056 a         3933 c         3518 g         3131 t
ORIGIN      
        1 agcgctatgc gcatcctggg ggttcatcac cactgacggg aaactctgct ggcggaacat
       61 cgctttttgt aggtctttga cgtcgaaact gacatacaga tcgtgcatct cctgacacaa
      121 ctggcgcaaa gtgtagtcgc gatagcgcac cggatatttg ttataaacgc tcggcaacac
      181 ctcagccagc ggcgagtcat cctcaatatg ctgttcaaac tgcgccaaca tctctaccag
      241 ttgtgccagc ttctcgtggc tttccgccgg agttaataag aacagaatgg agttgagatc
      301 gcacttctcc ggcacaatgc cgttctcacg cagatagtgc gccagaatcg tcgccggaac
      361 gccaaagtcg ctatattcgc cggtttcggc attgatacct ggtgtagtga gtaacagctt
      421 gcacggatca acaaaatact gatccgcggc atatccttca aagccgtgcc acttcgcccc
      481 cggctcaaaa ctgaaaaaac ggcggtcgct ggctaacact gatgtcggat aatcctgcca
      541 caatttgcca tcaacaacgg gcgggataaa cgggcggaac agcttacagc gcgcaagaat
      601 agccttgcgc gactcaatac ccaactcaac gcactcagcc cacagccgac gcccactctc
      661 cccttcatga attttggcgt taacatccag tgcagcaaac agcggataga aagggctggt
      721 agaagcatgg agcataaagg cgttattcaa ccgcttatgc gggcaaaaac gcgcctgtcc
      781 gcggatatgg ttatcttttt tatggatctg cgacgtctgt gagaatcccg cctgctgttt
      841 gtgcaccgac tgagtcacaa agatccccgg atcgttttcg ttaagttcta atagcagcgg
      901 cgagctatcc gccatcatcg ggataaactg ttcgtaaccg acccacgcgg aatcaaacag
      961 aatgtaatca cacagatgcc caacggtatc gatcacctga cgggcgttat agacagttcc
     1021 gtcataggtt cccagctgaa taatcgccag gcgaaacggg cgcggcagct cggctttttc
     1081 tggcgcaacg tcgcgaattt gctggcgcag atactcttca ttaaaacagt gcgcatcaat
     1141 accgccaatg aaaccaaacg ggttgcgtga agcttccaga tagaccggcg tcgcccccgc
     1201 ctgaatcagc gcgccgtgat gattcgactt atggttgtta cggtcgaaga gcaccagatc
     1261 gccacgcgtt aacagcgcat tcgtcaccac tttattcgct gccgatgtgc cgttcagcac
     1321 aaaataggtt ttatcggcat gaaagacttt ggctgcgaat ttctgcgcat ctttcgccaa
     1381 taagcagatc gcccaatttt acgtcagcgt tacacatatc ggcgcgaaag acgttctcac
     1441 caaagaaatc gtaaaaatgg cgtccggcag gatgcttttt aaaaaacgca ccatgttgat
     1501 gtccagggca agcaaaggtg ctgttgccca tctcaacgta ctgcgtcagc gtgtcataaa
     1561 acggtggcag caaattctct tcatactgac aggctgcgga ttccagctcc agccactgct
     1621 gctcgttgcc gttgattacc gccgtaacgc ccgcaggtaa ttcaacagca tgttcggaat
     1681 acaaaaacac cggtagatga aaaccggtgc gcttaagcaa cgcaagaatg ccactgcgac
     1741 tatccgcagc ggtaatgacg actgccacga cgtccgtaaa atcagtatct cccaacgcca
     1801 ccacgcgacg atgagaagaa agtcgggata ccagttcact actggcggca atattcattg
     1861 atttcataag cgcaaacccg tttcggggaa gtaagaatac cggacaaggt ggaaaaccct
     1921 gccccatgag atatgggtca aactggtcac cagctccgac cgccagacat cagtaaaagc
     1981 agaaacgctc tgattttact gttgtcctgc agtgagcgtg cgttaacttc accgcatgag
     2041 cagtaacata gaaagggaaa cgtttcgcgc gaaacggcga taagcgagag aatgtaagga
     2101 ggtggcgtgc atcgggcaaa ctccgtacag agaggagaaa attcgcgcaa tcatggcacc
     2161 tttcgctaaa gcgtgcaagc caggactttg cgaccagaca agccatcaac aaggcaaaaa
     2221 gttcataata agaaaatcaa acaatacagt taacaggaac tcttgtggtc atcggccctt
     2281 ttatcaacgc tagtgcagtc ttactgggtg gcgttctcgg cgcactgctc agccaacgct
     2341 taccggaacg tatccgcatc tccatgacat ctatttttgg tctggcatcg ctggggattg
     2401 gtattttact ggttgtgaaa tgcgccaacc ttccagcgat ggttttagct acgctacttg
     2461 gcgctctaat tggcgaaatt tgtttgctgg agaaaggtgt caatacagca gtcgccaaag
     2521 cacaaaatct gtttcgtcac tcacgtaaga agccaacgca tgaatctttt attcagaatt
     2581 atgtcgcgat tattgtcctg ttttgcgcca gcggcaccgg gatcttcggg gcgatgaacg
     2641 aagggatgac cggcgatccg agtattttaa tcgccaagtc atttcttgat ttctttacgg
     2701 cgatgatctt cgcctgctcg ctgggtattg cggtgtcggt aattagtatc ccattactga
     2761 tcatccagtt aacgctggcg tgggctgccg cgctgatatt accgctgacc acaccgtcga
     2821 tgatggcaga cttcagcgcc gtaggcggtt tattgctgct ggcaaccgga ttacgcatct
     2881 gtggcattaa aatgttcccg gtggtcaaca tgcttccagc actccttctg gcaatgccgc
     2941 tttccgccgc ctggtttgcc tgacaatgcg tgcaatagcg gcaaagtgat gatagattgt
     3001 gcagtctgca gtaaattgaa gaaatttgat tgacgagacg aggcgaatca ggtttaatgc
     3061 gccccgttgc ccggatagct cagtcggtag agcaggggat tgaaaatccc cgtgtccttg
     3121 gttcgattcc gagtccgggc accactaatt cttaagaacc cgcccacaag gcgggttttt
     3181 gcttttggat ctgacaataa ccttcacgaa aaaagtttgc ttataaagtc tgggggaatt
     3241 actctcgcca cgttaacgag agtaatttta ttgatactaa tctcctgata ctttaccccc
     3301 gtccaaactc cagccgctgg acattcacca tcccagtctt ctcagcagca ctggcatcaa
     3361 tttgtgtcac ccgcagcgca tacttttcat ccagcgcgtt taaccagttc agcaggtcat
     3421 taaacaccac cggatctatc cagacctgaa tattctcccc acgctcggct atccgcttga
     3481 tgactaccga gtgcgcggaa gcactgtcac tgataacccg cgatacctgc gcaggcgttg
     3541 ttgtggcgga ttttcgcgcc gcaataatat ccggcgcggc gctcctcagt ctggtgttca
     3601 tcgccaccag ttgctgcaac attgtctcct gttgtactat ccgttcgctc aacggctgcc
     3661 agatgaggac gtaatatccg acgctaaaca ggaacaccac cgctgccagt aacatgccct
     3721 tttcacgcgg agaacgcccc gccaggtgtt gtgccagcca gtgttcgcca cggcttaact
     3781 ggcgttcacg ccattgctga aaatagtgaa taaatttatc gcgtaacatg ttatttcctc
     3841 cgcaacgtta cgccgccgga aaccgcatca ccctctttct gtaacgcgtc ctgttgcaca
     3901 acataatcgg ttgccagtgc actacgcagt ttgtcgaaac tggcaaagtt cgcggcccgt
     3961 agctggaggt gaagtatctg gcgtttttga tcaaaggtaa aaccacgcat ttcgatgtcg
     4021 gaaagtgacg ctgatttcag ggtgctggct atcgctgaca actcggcgag cagccgggta
     4081 tcgtcggcct gtgggcgata ttttttcagc gccatcgtca cctgagagcg taaattcaca
     4141 atccgcttct gctccgggaa caacgttaag aactgttcct ccgcctgggt gcggctttgc
     4201 gccacctgtt cgctgacgct ccataacgtc acgccccgct ccactgccag cgcaactaga
     4261 atcagcaata tcggcagaat catcacccgc cagcgcgccc actgttttcg gtagctgacg
     4321 cgaggctgcc acggccctgt cagcaggttc ccttccggtt cgccataagt ggtaacggcg
     4381 ggcagagctg taacggtcag gcgttcagcg tctgcgccag cccatgctga tagcttttcc
     4441 ggtgcaatgc cgactacggt tagcgaaagc ggtaaatcct gctcattgag ctgggcgcgg
     4501 aacatgaccg gagccagcgc ccgcccggcg ctccatcccc ggcattcatc aatgcggcag
     4561 ataacccgtt gcgcatcgcc agccataacc ccacaaggaa tggacatcca gtctggcgcg
     4621 acggtagcgc gggtgatgcc gttttcctgc aaccactgcg caatgttgcg catatgctgt
     4681 tggtgaatca ctgctacggt tgccagttgc tggtcgatat tcaacggggc gaaatgcagt
     4741 tcatcgatat cctggttcag ctcttcttcc agtaaggcgg gcagaatggt cggtatctgc
     4801 ttacgggcga catcaggcag ttcaacctgc cagacgctga tccattcgcc gggaatgtag
     4861 agtcgaatcg catcggtttg cagccattgc tggagctgtt cgttagcaac gtcagaccag
     4921 ataccgtgct ccacatcggg tgtacggcgc tgccaatgga tgggatcagc ggcgcaaagc
     4981 gggaaaaaaa tctcaaggat ggaactcact cactttctcc tgtctgatgc cagagaaccg
     5041 aaaagtgttg tgggcccatg cggacaatta acgagttcat cgtcagttca atctcattca
     5101 cggtgatatc tgaacgcagc cagaagtaat tgctgtccac gctcaggacg gtttttagct
     5161 gttttttagt acgctcatcg acgtcagcaa gtagcggctg tgcaagaaac tgatcgacat
     5221 cttcccagcc cttcgccgga cgttgttgta ataacgcccg cgcctgaacg gggcttaacc
     5281 acgggtcaaa cagcgcctca agaatcacac tttgcgtgac gtctaaagta ttgatgttga
     5341 tttgctggcg gatcatcggc agcgcacaga ccagcggttt cagtttttga taaagcccgg
     5401 cgtccattcc ctgtaccacg cgcatctcac tgatatcagc cagcggttga ttggcggcgt
     5461 agaacggcac cgaacgggcg agatactcgc tgtcttcacg gcccagacgt gtctgcacgc
     5521 tgcggtcctc gtcaataaac tcccacaggc tttcggctat cagttcggcc cgataagcag
     5581 gcacatccag gcgcgagatc agggcaatca actgttgtac cgcaagcgga cgcgacgccg
     5641 ttgtcggctg agcaagggca ttcaggttaa agcaagcctg tgcgtcacgc agggtgaccg
     5701 caatttgccc ctgcggcaga gggaagaaac gagggccgga tgcccacggc tgtgccagat
     5761 gcacgcgctt ttcatttttc aggctcagac tgagcgcgct cagcgccagg ctttccgcac
     5821 tggcgctgta ccacagcgcc tgctggtact cctgctggct gcgcgttcgc ccaagttgtt
     5881 gctgcattcg cccggaaagc gtgatggtta ccagcatcat aaccgccagc aataccagca
     5941 ccacgaccag tgccattccg cgttttggtg gtgaggtgat catgattatt gcggcccgcg
     6001 taacaaccag atgcgttcaa tctcgcccca ttgcggcgaa tgcagggtca tgcgtaccgc
     6061 cacagggatc gcctgtactg acgaccagct ctcctgccag cgcgtgccgt cgtagaactg
     6121 caaacggagc gaatcggccg gaatcaactt ttgcattgtc ggcttcacgc tgcctgcggc
     6181 atcggtcagc ggccaggcta accgttcgag ataaccgtca tgaatgcggt aaccgacggt
     6241 gagcagattg ctgcgcggca gacgcatcaa cgggttaacc acaccgccgc gcacaaaacg
     6301 cattccttca ctctcagacg ccagcacgcc agcgccagcc agtaaagctg gttcacgctg
     6361 gccctgatcg cctcttaccg gacgcggcat catttgggtc agatcgtggg tcagaaaact
     6421 catcgtttgc tgcatgaggt ttagtttttg atcgtgatcg gcgacggcgc tattcacgcg
     6481 cgtgacgccg ttagtcacct gctgcgccat cagtgccagc gaggcaaaaa tggcaattgc
     6541 caccaacatt tccagtaacg tgaaaccagc gcgagtcctt ctcactgttg gcctcccacg
     6601 gcgctaaacc aggcgcgtcg tgactgaatc accgacgaaa agtcttcgtg acggctgact
     6661 tcaatatcca ccgcctggag cagcgcgttg cctgtattca atgggattgt tcgccagtac
     6721 cagcggcttc ctgccatatc gctctcgccc tgatgcctga ccgcccgctg ctcacgggtc
     6781 atcaggtaga gcagcgcagt ctggttttca gctacccagc ccgctaccgt tttttcctca
     6841 agaacgtgct gattactcag cgcaccgctg gcaatctgta acaccgccgt ggcagccagc
     6901 gcaaaaatcg ccagcacgag catcacttcc agcaaggtaa atccgcgctt catggcatcc
     6961 tctcatcaca ttgattgagg gataacgcgc catcgtgtgc cagctttacc gctcaacatg
     7021 cgttttgcgc cgccgagtag aagcgcagcg taaacggcgt ggcgggttca aaaggcgaaa
     7081 aacggatctg cggcgtcttc tttttcgcct ctttttgcaa ctccagttca atatcgtgca
     7141 gcgtcaggcg acgacgttgc agctccagcg catattcctt ctgccagata tcacttccgg
     7201 gttgtaacag catctgcacc tgtttcggca ccgtaacctg tgccgataac cgggtcgcag
     7261 aaacgggcaa ccactgcccc tgacgacgct gcataaactg atagccaggc gggtcgatta
     7321 gcacaccgag tgtctgtcct tcaatcactg ccctgtcctt aaactgcgca aagcgagtca
     7381 gaaaatcctg tgccgctttt ttcgcgggcg gttcagaatc ggtcgcaaac gtctgtacca
     7441 cgcccgcact ggcaaggccg ataaggaaaa tcaccagcat gatttccaga agtgtgaatc
     7501 cgcgttcagg cactgcttac tgaaactcct gcaaattcca gttaccgata tctgcgccag
     7561 cgccttcccc gttttcctga ccatccgccc ccagggtata aacatcaaac agtccttttt
     7621 cacccgggct gagatactga taatcattgc cccacggatc ctttggcagt cgtttgatgt
     7681 atccaccagt acggtagttg cgggagtccg ccatattggc tggctgctgg atcagcgctt
     7741 ccagcccctg ttctgtggtc ggataacgcc cgttatccag tcggtacata tctagtgcgt
     7801 tttccagcgc cacgatatcg ctgatggctt tttgccgatt ggctttctct ttgttgccca
     7861 acaggttagg caccaccaga cttgccagga cgccaagaat aacaatcacc accatcactt
     7921 ccagcagggt aaaacctgcc cgtggtttgt gtgtgcggga taacgaattc atgtgataac
     7981 tccgtaaatt acattccaac catattattc agttgcagca tcggctcgag gatggcgatg
     8041 acaataaaca gcaccacgcc cgccatcatc accaccagcg caggctcaaa cagccccaac
     8101 gccagcccca cctgggtatc aaattcccgt tcctggttaa cagcggcctg ctcaagcatg
     8161 gtttccagtt cgccgctctg ttcgccggaa gcgataatgt acagcatcat cggcgggaac
     8221 aggcgcaact ccgccagcgc ggcgcgcaga ctgcttcctt cgcggacgcg atctgccgcc
     8281 agcagcagtt gttgttcgac atagcgattt gccgacacgg cggcagcggt ctgaatgcct
     8341 tccagtagcg gaacactgct ggcggtgagg atgcttaatg tgcgggaaaa acgcgccgta
     8401 ttcagcccgc gcgcaacacg gcccgtcacg ggcagacgca gcaaggtttt atcccagcgc
     8461 aggcgcatag taggattttt aagtagccat tgccccagca ccagaagcgc cagcaatccc
     8521 gccagccagt aaacgccgct ggcctgtaac gcatcactca tagcgataag cgcacgggtg
     8581 gaggagggta gcgcgtgtcc gagatgatca aactgttcga tgattttcgg caccactgcc
     8641 gtcagcaaaa tagtgaccac gcccgttgcc accaccagca taaccagcgg atagagcatg
     8701 gcctgcaata gacgtgattt caggcgctgt cgctgttcgg tgtaatctgc caggcgattg
     8761 agcaccacgt cgagatgccc ggatttttct ccggcagcga ccatcgaaca aaacagggaa
     8821 tcaaagacgc ggggatgttc gcgcaggctg tccgacaggg tataaccttc ctgaatccgg
     8881 ctgcgcagcg ccattccgag gctcttcaca tgcagttttt cactttgctc actgaccgcc
     8941 tgcaagcagg tttccaacgg cattgctgcc tgcaccagcg ttgccagttg gcgcgtgaac
     9001 agcgccagat ctgccgccgc cacgcgacga tgtgcgtgcc gccgacgctg caacattccc
     9061 cctgccgatg cattcatcct ggcttcaatg tgcacgggga taagctcttt accgcgcaac
     9121 aactggcggg catgacgcgc ggaatccgcc tcaatcatgc ctttggtttt gcgaccatta
     9181 cgctccagcg cctgatagta aaacagtgcc attacgcctc catggttacc cgcagaactt
     9241 catcgagaga ggtttctccg gcgagcactt tctcaatgcc gttgctgcgg atacccgcag
     9301 agtgttgccg gacataacgt tccagctcca gctccccggc ctgacggtgg atcaaatcac
     9361 gcaatgtggc atccaccacg tcagctcatg gatggcagtc cgtccgcgga aacctttgtg
     9421 attacaggcg gggcagccct gcggatggta cagagtgacg gttcgcgcat cggtaatgcc
     9481 cagcaggcgt ttttcttcgt cagtggcagg cgcggcctga cggcagtcgg gacacagcgt
     9541 gcggaccagt cgctgcgcca tcacgcccgt cagactggaa gagagcagga aaggctccac
     9601 gcccatatcc tgcaaacgcg tgatcgcccc caccgccgtg ttggtatgca gcgtggaaag
     9661 gaccaggtgt ccggtaagcg atgcctgaac agcgatttct gcggtttcgg tatcgcggat
     9721 ttcaccgacc atcaccacat ccgggtcctg acgcaaaatc gcgcgcaggc cacgggcgaa
     9781 ggtcatgccg acgcgggtgt taacctgtgt ctgaccgatc ccttcaatca tgtattcgat
     9841 ggggtcttca accgtgagaa tgttacgcga atggttgttc agctcctgca atccggcgta
     9901 cagcgtggtg cttttgccgg aacccgtcgg ccccgtcacc agaaagatgc cgtgcggttt
     9961 gtgtaacagc tggcgcaact gcacggtcag ttgctggcta agccccagac gctccagcgt
    10021 caggcgggcc tggtttttgt ccagcagtcg cagcaccacg cgctcgcccc aggcagaagg
    10081 catggtggag acacgcacgt caatcgcccg gccgcccagc agcagcgcaa tacgtccatc
    10141 ctgcggtacg cgcttttcgg cgatatccag ccgtgccatc accttgatac gcgataccag
    10201 cagcgaggcc agtttgcgcc ccgggcgcag catttcatgt aatgtgccgt caacgcgaaa
    10261 acggatcacc agactctttt caaacgtctc gatgtggata tccgaagcgc cttctttaat
    10321 cgcctctgcc agcatggcgt tgatcagttt gatgatcggc gcatcgtcgt cactttccag
    10381 cagatcttcc gtttctggca gttcttccgc gagagtaaaa aagtcctcag cagaaccgag
    10441 atcttccatc agctggcgag cctcggaaga gtcccgctgc cagaccgcat tcagccgctg
    10501 ttcaaattcg gcctcgtcga tttgccgcag cgtaaagggc gcgttcagcc cccgctgcag
    10561 ctcctgcaaa acagagagcg atagcggatg aacgtggagg atctccagcg acgcttcgca
    10621 ccatgccacc aggctaaacc gacggctgaa actgtagggc agacgcacgg tcttggcggt
    10681 ggtttcctgt gctacaggca ccattaacgc gttctcccgg cattgaggaa cgcgcgaact
    10741 tccggcggta aggcctggtt ttgcgctggc agtaccggct gtgcggtgtg cggcatcagg
    10801 cttaaacctt gctcatcacg atagatctgt tcggcgcgca tatagttata tttgcgctgc
    10861 gacacgccgt ctgccgccat accgtcatgc agaatggtcg ggcggataaa caccatcagg
    10921 ttacgttttt cttttttatc cgccgtcgat ttaaacaggt taccaatcaa tgggatatcg
    10981 cccagcagag gcactttcgc cacgctttct cccgcctgat cgtccatcag accaccaagc
    11041 acaatcagct caccatcgtt agccagcacg gtggttttca gtttgcgctc accaaacacc
    11101 acgtcgaggc tggtctgtcc ttccaccttc gagacttcct gctcaatcac catctgtacc
    11161 gcgttacctt cgttaatctg cggcgtgact ttcagcatga tgccgacttt tttcctttct
    11221 actgtattga aaggattgct gttattggag ccaacggtag agccggttaa taccggaacg
    11281 tcctagccca ccatgaagaa ggcttcctgg ttgtccagcg tagtgatgct cggcgtggag
    11341 agaacgttcg agctggagtc gtttttaacc gcctgcacca gtgccatcca gtcgcctttc
    11401 accacgccaa ccgccgtacc gctaaatcca gaaagaagct gggcgagtgt ggagagatcg
    11461 ccgttggtat ccggattaat ggtggtagcg ccgttttcac tgatcaccgt cgagcctttc
    11521 tgcggtttcg cctgagaaat ggctgccccc agcgtaccga tagggatctg cgtaccatta
    11581 gcaaactgca ttaatccggc atctttcgac gcccactgca cgccgaagtt gatattgcta
    11641 ccttcggcaa cttccacgat caacgcctcg acgtgcacct gagcacggcg aatatccagt
    11701 tgttcaatta cgctttgcag cgactgcatg atgtcctgcg gcgcggttac aatcagggca
    11761 ttactgtgtt tgctggcggc gatggataca acctcacgcc cgctaccgac cgtgccttcc
    11821 gcctcttctt tagccgccgt gagcgtgccg ctgacctgtt tcagcacatc gaccagatct
    11881 tcggctttgc tgtatttgag atagaaaacc tggctgttgc cgctgcgttc catttctgag
    11941 tccagccgac ggatcaggcg gcgcattttg tcccgcgtgg ccgggtcacc actgacaatc
    12001 acactgttgg tgcgttcgtc ggcgacaatt tgagatttca gcgtcgcagg ctggttctcg
    12061 ccgctgtttt tcgtcaggct ttccagcacg cgggcgattt ccgaagccga ggcgttatcc
    12121 agcgggatca cctcttcggt gcgattaccc gcgtgatcca cgcgctggat cacttccgtc
    12181 aggcgctcca caacggaggc gcgtccggtg agcataatca cgttggaggg atcgtaatta
    12241 acaacgttgc ctgagcctgc gctgtcgatc atctggcgca gaatcggtgc cagctcgcgt
    12301 accgacacat tacgtaccgg cactactttg gtgaccattt catcgcccgc gtagttgtcg
    12361 ctgccttcac cgaccagcgg cagcggctcg actttcgcag cgctggattt caccaccttc
    12421 agcacgtcgt tttccatcgg tacgacggca tacccctgtg cttccagcag gttaaggaat
    12481 agctggtaat actggcgttc attgagcggg gtcatggtgc gaatactcac tttcccctgt
    12541 acgcccggcc ccataatgat ggttttatta aggttagcgc cgacggtttc gatgaacgat
    12601 ttcaggtcgg tatctttaaa attagcggtg aaagtggctt cttccgccca gaccggtgaa
    12661 ctgcataatg ccgctgccag caccagcggc agtaaacgct tttttgtttt gaggccagtt
    12721 gtcttcttac gccagaccga caacgtaata tcacgccaaa acacgatgaa tgattctcct
    12781 ggattaaatg cggttagcgc agcgcgatgg aaatgtcgtg gcgcgcaccc ttgcgtaaaa
    12841 ccgtaagttg aatggaatcc attgaaggta actgccgcat cagagcaatc attgctcgtg
    12901 gatcagtgaa atcctgctga tttagcgcaa tggcgatatc gccttccttg aaaccgctgg
    12961 catcgaacag agaacgatct gcccccggct tcactgcata accgacaatt ccctccttac
    13021 gcacaggcgt aagctggata tagttaaaaa ttttctgcgg atctttcgcc agtgcctgac
    13081 gcacggcagt cggtatctca actggcgcac tgacagcagg ttcagcaaca gcttgctttg
    13141 cttcgtcact gacagctttt ttgttggtcg cggcaacggt ggaacgctcc tcttcagcca
    13201 ggctcaggcg ctctattttt ccctgatagc gcagcatcac atggtcgcga ttgatttcct
    13261 caatcaccgc gttgtgcgag ccaagcgttt caccctgcaa atagacctgc tgtttaccgc
    13321 cttcttcaat aaccgcgccg ggtctggcac caaaggcgat cccgcgcgca ccacattaag
    13381 acgcgtttct gccacaggca caggttcggg ttgttttacc ggcgtggcga cgggctgata
    13441 tttgccaaac cagttttgct ggctgattaa ttgcacgtca tttttatcga acgtttttgc
    13501 atccgcacgg ggcggtttat tcgccgatgg ggaaacagcc gtatattccg cagaaaagga
    13561 gaaatagcgc cagagtgaat gcgccacttt tgcagaaata ataagcagca tcagccagaa
    13621 catcccgcgt acaatttt
//
LOCUS       DADMJE010000108        13585 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.109, whole genome shotgun sequence.
ACCESSION   DADMJE010000108 DADMJE010000000
VERSION     DADMJE010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13585)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13585)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13585
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.109"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            68..344
                     /locus_tag="JN001_002826"
                     /pseudo
     CDS             68..344
                     /locus_tag="JN001_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001254202.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            515..862
                     /locus_tag="JN001_002827"
     CDS             515..862
                     /locus_tag="JN001_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidH family protein"
                     /protein_id="HAY9053997.1"
                     /translation="MKISRLGEAPDYRFSLANERTFLAWIRTALGFLAAGVGLDQLAP
                     DFATPVIRELLALLLCLFSGGLAMYGYLRWLRNEKAMRLKEDLPYTNSLLIISLILMV
                     VAVIVMGLVLYAG"
     gene            852..1214
                     /locus_tag="JN001_002828"
     CDS             852..1214
                     /locus_tag="JN001_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF202 domain-containing protein"
                     /protein_id="HAY9053998.1"
                     /translation="MPDSRKARRIADPGLQPERTSLAWFRTMLGYGALMALAIKHNWH
                     QAGMLFWISIGILAIVALILWHYTRNRNLMDVTNSDFSQFHVVRDKFLISLAVLSLAI
                     LFAVTHIHQLIVFIERVA"
     gene            1211..1708
                     /locus_tag="JN001_002829"
     CDS             1211..1708
                     /locus_tag="JN001_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HAY9053999.1"
                     /translation="MTGSQVIDAEEDRHKLVVEYKDALQPADFYHNFKQRGIRSVQLI
                     PYLEFDDRGDLTAASVTAELWGKFLIALFECWVRADISRISIELFDATLQKWCGGENP
                     QPRRDCQACDWHRLCPHARQETPDSVLCAGYQAFYSYSAPHMRVMRDLIKQHRSPMEL
                     MTMLR"
     gene            complement(1716..2900)
                     /gene="emrD"
                     /locus_tag="JN001_002830"
     CDS             complement(1716..2900)
                     /gene="emrD"
                     /locus_tag="JN001_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418129.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter EmrD"
                     /protein_id="HAY9054000.1"
                     /translation="MKRQRNVNLLLMLVLLVAVGQMAQTIYIPAIADMARDLNVREGA
                     VQSVMGAYLLTYGVSQLFYGPISDRVGRRPVILVGMSIFMLATLVAVTTSSLTVLIAA
                     SAMQGMGTGVGGVMARTLPRDLYERTQLRHANSLLNMGILVSPLLAPLIGGLLDTMWN
                     WRACYLFLLVLCVGVTFSMARWMPETRPVDAPRTRLLTSYKTLFGNSGFNCYLLMLIG
                     GLAGIAAFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLMWQ
                     SVICCLLAGLLMWIPDWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFLFLAGT
                     AGALVGGLQNIGSGVLASLSAMLPQTGQGSLGLLMTLMGLLIVLCWLPLATRMSHQGQ
                     PV"
     gene            complement(3319..3408)
                     /gene="tisB"
                     /locus_tag="JN001_002831"
     CDS             complement(3319..3408)
                     /gene="tisB"
                     /locus_tag="JN001_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin TisB"
                     /protein_id="HAY9054001.1"
                     /translation="MSLVDIAILILKLIVAALQLLDAVLKYLK"
     gene            3973..4071
                     /gene="ivbL"
                     /locus_tag="JN001_002832"
     CDS             3973..4071
                     /gene="ivbL"
                     /locus_tag="JN001_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilvB operon leader peptide IvbL"
                     /protein_id="HAY9054002.1"
                     /translation="MTTSMFNAKLLPTALSAAVVVVRVVVVVGNAP"
     gene            4177..5865
                     /gene="ilvB"
                     /locus_tag="JN001_002833"
     CDS             4177..5865
                     /gene="ilvB"
                     /locus_tag="JN001_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase large subunit"
                     /protein_id="HAY9054003.1"
                     /translation="MASSGTTSTRKRFTGAEFIVHFLEQQGIKIVTGIPGGSILPVYD
                     ALSQSTQIRHILARHEQGAGFIAQGMARTDGKPAVCMACSGPGATNLVTAIADARLDS
                     IPLICITGQVPASMIGTDAFQEVDTYGISIPITKHNYLVRHIEELPQVMSDAFRIAQS
                     GRPGPVWIDIPKDVQTAVFEIETQPAMAEKAAAPAFSEESIRDAAAMINAAKRPVLYL
                     GGGVINAPARVRELAEKAQLPTTMTLMALGMLPKAHPLSLGMLGMHGVRSTNYILQEA
                     DLLIVLGARFDDRAIGKTEQFCPNAKIIHVDIDRAELGKIKQPHVAIQADVDDVLAQL
                     IPQVEAQPRAEWHQLVADLQREFPCPIPKACDPLSHYGLINAVAACVDDNAIITTDVG
                     QHQMWTAQAYPLNRPRQWLTSGGLGTMGFGLPAAIGAALANPDRKVLCFSGDGSLMMN
                     IQEMATASENQLDVKIILMNNEALGLVHQQQSLFYEQGVFAATYPGKINFMQIAAGFG
                     LETCDLNNEADPQAALQEIINRPGPALIHVRIDAEEKVYPMVPPGAANTEMVGE"
     gene            5869..6159
                     /locus_tag="JN001_002834"
     CDS             5869..6159
                     /locus_tag="JN001_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase isozyme 1 small subunit"
                     /protein_id="HAY9054004.1"
                     /translation="MQNTTHNNVILELTVRNHPGVMTHVCGLFARRAFNVEGILCLPI
                     QDSDKSHIWLLVNDDQRLEQMISQIDKLEDVVKVQRNQSDPTMFNKIAVFFQ"
     gene            6233..6823
                     /gene="uhpA"
                     /locus_tag="JN001_002835"
     CDS             6233..6823
                     /gene="uhpA"
                     /locus_tag="JN001_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator UhpA"
                     /protein_id="HAY9054005.1"
                     /translation="MITVALIDDHLIVRSGFAQLLGLEPDLQVVAEFGSGREALAGLP
                     GRGVQVCICDISMPDISGLELLSQLPKGMATIMLSVHDSPALVEQALNAGARGFLSKR
                     CSPDELIAAVHTVATGGCYLTPDIAIKLASGRQDPLTKRERQVAEKLAQGMAVKEIAA
                     ELGLSPKTVHVHRANLMEKLGVSNDVELARRMFDGW"
     gene            6823..8325
                     /gene="uhpB"
                     /locus_tag="JN001_002836"
     CDS             6823..8325
                     /gene="uhpB"
                     /locus_tag="JN001_002836"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418124.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine-protein
                     kinase/phosphatase UhpB"
                     /protein_id="HAY9054006.1"
                     /translation="MKTLFSRLITVIACFFIFSAAWFCLWSISLHLVERPDMAVLLFP
                     FGLRLGLMLQCPRGYWPVLLGAEWLLIYWLTQAVGLTHFPLLMIGSLLTLLPVALISR
                     YRHQRDWRTLLLQGAALTAAALLQSLPWLWHGKESWNALLLTLTGGLTLAPICLVFWH
                     YLANNTWLPLGPSLVSQPINWRGRHLVWYLLLFVISLWLQLGLPDELSRFTPFCLALP
                     IIALAWHYGWQGALIATLMNAIALIASQTWRDHPVDLLLSLLVQSLTGLLLGAGIQRL
                     RELNQSLQKELARNQHLAERLLETEESVRRDVARELHDDIGQTITAIRTQAGIVQRLA
                     ADNASVKQSGQLIEQLSLGVYDAVRRLLGRLRPRQLDDLTLEQAIRSLMREMELEGRG
                     IVSHLEWRIDESALSENQRVTLFRVCQEGLNNIVKHADASAVTLQGWQQDERLMLVIE
                     DDGSGLPPGSGQQGFGLTGMRERVTALGGTLHISCLHGTRVSVSLPQRYV"
     gene            8335..9654
                     /gene="uhpC"
                     /locus_tag="JN001_002837"
     CDS             8335..9654
                     /gene="uhpC"
                     /locus_tag="JN001_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418123.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter family glucose-6-phosphate
                     receptor UhpC"
                     /protein_id="HAY9054007.1"
                     /translation="MLPFLKAPADAPLMTDKYEIDARYRYWRRHILLTIWLGYALFYF
                     TRKSFNAAVPEILANGVLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGL
                     IATGIINILFGFSTSLWAFAVLWVLNAFFQGWGSPVCARLLTAWYSRTERGGWWALWN
                     TAHNVGGALIPIVMAAAALHYGWRAGMMIAGCMAIVVGIFLCWRLRDRPQALGLPAVG
                     EWRHDALEIAQQQEGAGLTRKEILTKYVLLNPYIWLLSFCYVLVYVVRAAINDWGNLY
                     MSETLGVDLVTANTAVTMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVG
                     SLWLMPFASYVMQATCFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLG
                     ASLAGWPLAKVLDTWHWSGFFVVISIAAGISALLLLPFLNAQTPREA"
     gene            9792..11183
                     /gene="uhpT"
                     /locus_tag="JN001_002838"
     CDS             9792..11183
                     /gene="uhpT"
                     /locus_tag="JN001_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HAY9054008.1"
                     /translation="MLAFLNQVRKPTLDLPLEVRRKMWFKPFMQSYLVVFIGYLTMYL
                     IRKNFNIAQNDMISTYGLSMTQLGMIGLGFSITYGVGKTLVSYYADGKNTKQFLPFML
                     ILSAICMLGFSASMGSGSVSLFLMIAFYALSGFFQSTGGSCSYSTITKWTPRRKRGTF
                     LGFWNISHNLGGAGAAGVALFGANYLFDGHVIGMFIFPSIIALIVGFIGLRYGSDSPE
                     SYGLGKAEELFGEEISEEDKETESTDMTKWQIFVEYVLKNKVIWLLCFANIFLYVVRI
                     GIDQWSTVYAFQELKLSKAVAIQGFTLFEAGALVGTLLWGWLSDLANGRRGLVACIAL
                     ALIIATLGVYQHASNEYIYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGAADGIKG
                     TFAYLIGDSFAKLGLGMIADGTPVFGLTGWAGTFAALDIAAIGCICLMAIVAVMEERK
                     IRREKKIQQLTVA"
     gene            complement(11228..12994)
                     /gene="adeD"
                     /locus_tag="JN001_002839"
     CDS             complement(11228..12994)
                     /gene="adeD"
                     /locus_tag="JN001_002839"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HAY9054009.1"
                     /translation="MNNSINHKFHHISRAEYQELLAVSRGDAVADYIIDNVSILDLIN
                     GGEISGPIVIKGRYIAGVGAEYADAPALQRIDARGATAVPGFIDAHLHIESSMMTPVT
                     FETATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQVSSCVPALEGCD
                     VNGASFTLEQMLAWRDHPQVTGLAEMMDYPGVISGQNALLDKLDAFRHLTLDGHCPGL
                     GGKELNAYITAGIENCHESYQLEEGRRKLQLGMSLMIREGSAARNLNALAPLINEFNS
                     PQCMLCTDDRNPWEIAHEGHIDALIRRLIEQHNVPLHVAYRVASWSTARHFGLNHLDL
                     LAPGKQADIVLLSDARKVTVQQVLVKGEPIDAQTLQAEESARLAQSAPPYGNTIARQP
                     VSASDFALQFTPGKRYRVIDVIHNELITHSHSSVYSENGFDRDDVCFIAVLERYGQRL
                     APACGLLGGFGLNEGALAATVSHDSHNIVVIGRSAEEMALAVYQVIQDGGGLCVVRNG
                     QVQSHLPLPIAGLMSTDTAQSLAEQIDALKAAARECGPLPDEPFIQMAFLSLPVIPAL
                     KLTSQGLFDGEKFVFTTLEVTE"
     gene            13169..>13585
                     /locus_tag="JN001_002840"
     CDS             13169..>13585
                     /locus_tag="JN001_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY9054010.1"
                     /translation="MNNDNTDYVSNESGMLSRLFKLPQHGTTVRTELIAGMTTFLTMV
                     YIVFVNPQILGAAQMDPKVVFVTTCLIAGIGSIAMGIFANLPVALAPAMGLNAFFAFV
                     VVGAMGISWQTGMGAIFWGAVGLFLLTLFRIRYWMIS"
BASE COUNT         3025 a         3530 c         3793 g         3237 t
ORIGIN      
        1 gccggggcgc aatgtccggg caaaatcagg tttaaaccgt tcgatactgg atcagggctg
       61 gtatgaaatg cgccgccagc ttgagtacaa gcagctctgg agtggcggtc aggtgcttgc
      121 tgttccgcca gcgttgcgcg tgctgtggtc atacagcgaa agaaaatcgc ctgtcacaaa
      181 gtaaattcag atgccaggta tgtggatata cagcgaacgc cgatgtaaat ggcgctcgta
      241 acattttagc ggcggggcac gccgttcttg cctgtggaga gatggtgcag tcaggccgcc
      301 cgttgaagca ggaacccacc gaaatgattc aggcgacagc ctgaacgtag cagggatcct
      361 cgtccttcag ggcgtggagg atgtcaattt gcgctatgat acccatctga cctccttgta
      421 gcggatggca aaagcatatc aggaaacggg cggacgaaat tcttaaaaaa aaccgctaaa
      481 gatagagcgt tagtgaaatt gcaaaggagc aacaatgaaa atttcccgcc ttggagaagc
      541 gcccgattac cgcttctcgc tggctaatga gcgtactttt ctggcgtgga tccgtaccgc
      601 actaggattt ctggcggcgg gggttgggct tgatcaactt gcgccagatt tcgccacgcc
      661 cgtcattcgt gaactgctgg cgttgttgtt gtgtctgttt tccggcgggt tagcaatgta
      721 tggctacctg cgctggttac gcaatgaaaa agcgatgcgt ctgaaagagg acctgcccta
      781 caccaacagc ttattaatca ttagcttaat attgatggtc gtggcggtga tcgttatggg
      841 actggtgttg tatgccggat agccgcaaag ccagacgcat tgccgaccca ggactgcagc
      901 cggagcgcac atcactggcg tggtttcgta ccatgctggg ctacggcgcg ttgatggcgt
      961 tggctatcaa acacaactgg caccaggcgg gcatgttatt ctggatttcg attggcattc
     1021 tcgccatcgt ggcgctgatc ctctggcact acacccgtaa tcgcaattta atggatgtca
     1081 cgaatagcga tttttcccaa tttcacgtag tccgtgacaa atttttgatc tccctcgcgg
     1141 tgttatctct cgcaatactg tttgctgtaa cgcatataca tcaacttatc gtatttattg
     1201 agagagtcgc atgacaggaa gtcaggtcat tgatgctgaa gaggacaggc ataaactggt
     1261 tgtagagtac aaggatgctc tgcaacctgc cgatttttat cacaatttca aacagcgggg
     1321 catccgctcc gtacagctca ttccctatct tgaatttgat gaccggggcg atctgacggc
     1381 cgcttcggtg acagcagagc tgtgggggaa atttttaatt gccctgttcg agtgttgggt
     1441 gcgggcagat atcagtcgta tctcgattga gctttttgac gccaccttac aaaaatggtg
     1501 tggcggcgaa aacccgcaac cgcgccgtga ctgccaggcg tgcgactggc atcgcctgtg
     1561 cccgcacgct cggcaggaga cgccagacag cgtgctttgt gcgggctatc aggcgtttta
     1621 ttcttactcc gcaccgcata tgcgggtgat gcgtgatctg ataaagcagc atcgttctcc
     1681 catggagctg atgacgatgc tgcggtgacg tgcgcttaaa cgggctgccc ctgatgcgac
     1741 atccgcgtcg ccagcggcag ccagcacagc acgatcaaca atcccattaa ggtcatcaat
     1801 aaccccaggc taccctgacc ggtttgcggc aacatcgcag agagcgacgc cagcacgccg
     1861 gaaccaatgt tttgcagacc gccgaccagc gcgccagccg tgcccgccag gaagaggaac
     1921 ggctccatcg cgccgctggt cgccagcgga aacagcatcc cggcaccgaa aaagaacagc
     1981 gcggcgggaa cgagcagcgt ccagacattc atcacgccaa accagtcggg gatccacatc
     2041 agcaagccag ccagcaggca gcagataacc gactgccaca ttaacgtgga gaagcgttta
     2101 ttgggacgtc cggcaaacca tgcgccaaaa aacgctgccg gaatcggcag aataaacaaa
     2161 atactgaccg tcatactgct cagccctaac accgcgccca tcagcacgcc ggagcaggct
     2221 tcaaaggcgg caatcccggc cagaccgcca atcagcatca gcaaataaca gttaaaaccg
     2281 ctgttaccga aaagcgtttt ataactggta agcaggcgcg tgcgcggtgc atcgaccgga
     2341 cgcgtttccg gcatccagcg ggccatactg aaggtcacac caacacaaag aaccaacaaa
     2401 aagagataac aggcgcgcca gttccacatc gtatccagca gaccgccgat tagcggtgcg
     2461 agcaacggac tgacgagaat ccccatgttt aacaggctgt tagcatggcg caactgtgtc
     2521 cgttcatata aatctcgcgg caaagtacgc gccattacgc cgccaacgcc ggtgcccatc
     2581 ccctgcatcg cgctggcggc aatcaatacc gtcaaactgg aggtcgtgac cgcgaccagc
     2641 gttgccagca taaaaatgga cattccgacg aggatcaccg gtcggcgacc cacacggtcg
     2701 gaaatcgggc cataaaacag ctgtgagaca ccgtaagtca gcagataagc gcccattacg
     2761 ctctgcaccg ccccttcacg gacgttgaga tcgcgcgcca tatcggcaat agctggaata
     2821 taaatggttt gcgccatctg accgacggcc acgagtaata ccaacatcaa taacaaattg
     2881 acgtttcttt gccttttcat tatcacggat gcttttataa aaataattag aataagtcac
     2941 tacgcattcc cataaatgcg ggagaggaat ctatcacatt gatgaatgtt agccagatat
     3001 acgccaggaa tggggaattg tttagcggca gaatatgtaa acaaaagcgg caataaatgt
     3061 tgccgggagg gattacgtgc gaactgtaac cctctcccca aaggggcgag ggggaaacca
     3121 ccgttccctt tcagaaaatg agctaaacat tgcacgggac ggtcccctcg cccctttggg
     3181 gagagggcta gggtgagggg cacaggcagc gcaggtgcaa acattctgct ggtagaagaa
     3241 gcccccaact ccaacccgca cgctaaatat aaaaggggag cggttacccg ctcccctttg
     3301 gtgcgacttg aatctgaatt acttcaggta tttcagaaca gcatcaagca gttgcagtgc
     3361 tgcaacaatg agtttgagga taagaatggc gatatccacc aggctcatac gcgtctcctg
     3421 tggttcagga gcactgccag ctgacgtacc tttccgctgc ctgttgccag ctgttgtgca
     3481 cgcggtatct caaggagaaa cgttgtgctt gttgacataa cacagtgtgc tcacgcgggg
     3541 ttaaggcgct gacggcacca cccgtttcag ccaggactta gtgcgccggg taacgatgcg
     3601 gcccccgcat aatacattgc gtacagtgat attatagaag tttactgtat aaataaacag
     3661 tgatatttgg acaaaacgca aactgtgatc gatactcaac tatgccctaa atacgtcaaa
     3721 attcgtgccg aaattgcgcg ttctgcgcgg aacacgtata ctttcagtgt tgacataata
     3781 cagtgtgctt tgcggttacc agctgcaggc ggctgatgaa acctcgctcc ggcggggttt
     3841 tttgttacct gcaattcagt acaaaacgtg atcagcccct caattttccc ttgctgaaaa
     3901 attttccatt gtctcccctg taaagctgtg cttgtataaa tattgttaaa cacaaaacca
     3961 acaaggtccc caatgactac ttccatgttc aacgcaaaac tactaccaac tgcgctatcc
     4021 gccgcagtgg tcgtcgtgcg tgtggtggtg gtcgtcggca atgcgccgta gggactggaa
     4081 caacacacga ttccaaaacc ccgccggcgc aaaccgggcg gggtttttcg tttaagcacc
     4141 tcccggaaag tcggcccaga agaaaaggac tggagcatgg caagttcggg cacaacatcg
     4201 acgcgtaagc gctttaccgg cgcagaattt atcgttcatt tcctggaaca gcagggcatt
     4261 aagattgtga cgggcattcc gggcggttct atcctgcctg tttacgatgc cttaagccaa
     4321 agcacgcaaa tccgccatat tctggcccgt catgaacagg gcgcgggatt tatcgctcag
     4381 gggatggcgc gcaccgacgg taaaccggcg gtctgtatgg cctgtagcgg accgggtgcg
     4441 actaacctgg tgaccgccat tgccgatgcg cggctggact ccatcccgct gatttgcatc
     4501 accggtcagg ttcccgcctc gatgatcggc accgacgcct tccaggaagt ggacacctac
     4561 ggcatctcta tccccatcac caaacacaac tatctggtca gacatatcga agaactcccg
     4621 caggtcatga gcgatgcctt ccgcattgcg caatcaggcc gcccaggccc ggtgtggata
     4681 gacattccta aggatgtgca aacggcagtt tttgagattg aaacacagcc cgctatggca
     4741 gaaaaagccg ccgcccccgc ctttagtgaa gaaagcattc gtgacgcagc ggcgatgatt
     4801 aacgctgcca aacgcccggt gctttatctg ggcggcggtg tgatcaatgc gcccgcacgg
     4861 gtgcgtgaac tggcggagaa agcgcaactg cctaccacca tgactttaat ggcgctgggc
     4921 atgttgccaa aagcgcatcc gttgtcgctg ggtatgctgg ggatgcacgg cgtgcgcagc
     4981 accaactata ttttgcagga ggcggatttg ttgatagtgc tcggtgcgcg ttttgatgac
     5041 cgggcgattg gcaaaaccga gcagttctgt ccgaatgcca aaattattca tgtcgatatc
     5101 gatcgcgcag agctgggtaa aatcaagcag ccgcatgtgg cgattcaggc ggatgttgat
     5161 gacgtgctgg cgcaattgat cccgcaggtg gaagcgcaac cgcgtgcaga gtggcaccag
     5221 ttggtagcgg atttgcagcg cgaattcccg tgtccaatcc cgaaagcgtg cgatccatta
     5281 agccattacg gcctgatcaa cgccgttgcc gcctgtgtcg atgacaatgc gattatcacc
     5341 accgatgtgg gtcagcatca gatgtggacc gcgcaagctt atccgctcaa tcgcccacgc
     5401 cagtggctga cctccggtgg gctgggcacg atgggttttg gcctgcctgc ggcgattggc
     5461 gcggcgctgg cgaacccgga tcgcaaagtg ttgtgtttct ccggcgacgg cagcctgatg
     5521 atgaatattc aggagatggc gaccgccagt gaaaatcagc tggatgtcaa aatcattctg
     5581 atgaacaacg aagcgctggg gctggtgcat cagcaacaga gtctgttcta cgagcaaggc
     5641 gtttttgccg ccacctatcc gggcaaaatc aactttatgc agattgccgc cggattcggc
     5701 ctcgaaacct gtgatttgaa taacgaagcc gatccgcagg ctgcattgca ggaaatcatc
     5761 aatcgccctg gcccggcgct gatccatgtg cgcattgatg ccgaagaaaa agtttacccg
     5821 atggtgccgc caggtgcggc gaatactgaa atggtggggg aataagccat gcaaaacaca
     5881 actcataaca acgtaattct ggagctcacc gttcgcaacc atccgggcgt aatgacccac
     5941 gtttgtggcc tttttgcccg ccgcgctttt aacgttgaag gcattctttg tctgccgatt
     6001 caggacagcg acaaaagcca tatctggcta ctggtcaatg acgaccagcg tctggagcag
     6061 atgataagcc aaatcgataa gctggaagat gttgtgaaag tgcagcgtaa tcagtccgat
     6121 ccgacgatgt ttaacaagat cgcggtgttt tttcagtaac cgctcaaggc ttgaacaaca
     6181 tcgcgcttat cgttaaggta agcgcgtttt ttttacccgc caggacaaga ccatgatcac
     6241 cgttgccctt atagacgatc acctcatcgt ccgctccggc tttgcgcagc tgctggggct
     6301 ggaacctgat ttgcaggtag ttgccgagtt tggttcgggg cgcgaggcgc tggcggggct
     6361 gccggggcgc ggtgtgcagg tgtgtatttg cgatatctcc atgcccgata tctccggtct
     6421 ggagctgcta agccagctgc cgaaaggtat ggcgacgatt atgctctccg ttcacgacag
     6481 tcctgcgctg gttgagcagg cgcttaacgc gggggcacgc ggctttcttt ccaaacgctg
     6541 tagcccggat gaactcattg ctgcggtgca tacggttgcc acgggcggct gttatctgac
     6601 gccggatatt gccattaaac tggcatccgg tcgtcaggac ccgctaacca aacgtgaacg
     6661 ccaggtggcg gaaaaactgg cgcaaggaat ggcggtgaaa gagattgccg ccgaactggg
     6721 cttgtcaccg aaaacggtac acgtccatcg cgccaatctg atggaaaaac tgggcgtcag
     6781 taacgacgta gagctggcgc gccgcatgtt tgatggctgg tgatgaagac gttgttctcc
     6841 cgcttaatta ccgttattgc ctgctttttt atcttctctg ccgcatggtt ttgcctgtgg
     6901 agtatcagcc tgcatctggt tgagcgccct gatatggcgg tgctgttatt tccgtttggt
     6961 ctgcgtctgg ggctaatgct gcaatgcccg cgcggatact ggccggtgct gctgggcgcg
     7021 gagtggctgc tgatttactg gctaacgcag gcggtcggtt taacccattt tccgttattg
     7081 atgatcggta gtttactgac gttactgccc gtagcgctga tctcgcgcta tcgccatcag
     7141 cgtgactggc gcaccttgct gttacagggg gcggcgttaa cggcggcggc gttgttgcag
     7201 tcgctgccct ggctttggca cggcaaagag tcgtggaatg cgctgttgct gactttaact
     7261 ggcggcctga cgctggcccc gatatgtctg gtgttctggc actatctcgc caataacacc
     7321 tggctgccgc tcggcccgtc actggtttct cagccaatca actggcgcgg gcgacatctg
     7381 gtctggtact tgctgctgtt tgttatcagt ctctggctcc agttgggatt gccggacgaa
     7441 ctgtcgcgct ttacgccatt ctgtctggcg ctgccgatta tcgcgctggc ctggcactat
     7501 ggttggcaag gggcgctgat tgcgacgttg atgaacgcca tcgcgctgat cgccagtcaa
     7561 acctggcgcg atcatccggt ggatttattg ctctcgctgc tggtgcaaag tctgacaggg
     7621 ttgttgcttg gcgctggcat ccagcggttg cgtgaactta accagtcgct gcaaaaggaa
     7681 ctggcgcgca atcagcatct ggctgaacgg ttgctggaaa ccgaagagag cgtgcgccgt
     7741 gatgtggcgc gtgagctgca tgatgatatc ggtcagacca tcactgctat tcgtactcag
     7801 gcgggcattg ttcagcggct ggcggcagat aacgccagcg tgaagcagag cgggcagctc
     7861 atcgaacaac tatcgctggg cgtttacgac gcggtgcgcc gtttgttggg tcggttacgt
     7921 ccgcgccagt tggatgatct caccctggag caggccatcc gctcactgat gcgggaaatg
     7981 gagctggaag ggcgcggtat tgtcagccat ctcgaatggc gaatcgatga atcagcgtta
     8041 agcgaaaacc agcgcgtgac gctgtttcgt gtctgccagg aagggctgaa caacattgtg
     8101 aaacatgctg atgccagcgc ggtcaccctg caaggctggc agcaggatga acggttgatg
     8161 ctggttattg aagacgatgg cagcggtttg ccgccgggtt ccgggcaaca aggttttggc
     8221 ctcaccggaa tgcgcgagcg cgtaacggcg ctgggtggca cattacacat ttcctgtctg
     8281 cacggcacgc gtgtcagcgt ttctctacct caacgctatg tctaaggttt gatgatgttg
     8341 ccgtttctga aagcgcctgc cgatgcgcca ttaatgactg ataaatatga aattgatgcc
     8401 cgctatcgct actggcgtcg gcatattctg ctgaccatct ggctgggtta cgcgctgttt
     8461 tacttcacgc ggaaaagttt taacgccgcc gtaccagaaa tccttgctaa cggcgtgctc
     8521 agccgtagcg atatcggcct gttagcgacc ctgttttaca ttacctatgg cgtgtcgaag
     8581 tttgtctccg gcattgtcag cgatcgctca aatgcccgtt attttatggg gatagggctt
     8641 atcgccacgg gcattatcaa cattctgttt ggcttctcga cgtcgctatg ggcgtttgcc
     8701 gtactctggg tgctgaacgc ctttttccag ggctggggtt caccggtgtg tgcgcgtctg
     8761 ttaacggcct ggtattcacg taccgagcgc ggtggttggt gggcattatg gaacacggcg
     8821 cataacgtcg gcggcgcact cattcccatt gtgatggcag cggctgcact acattacggc
     8881 tggcgtgccg ggatgatgat tgctggttgt atggcgatcg tcgtgggaat ttttctctgc
     8941 tggcggctgc gcgatcgccc gcaggcgtta ggtttaccgg cggtcggtga atggcgacac
     9001 gacgcgctgg agatagctca acaacaagaa ggggcagggc tgacgcgtaa agagatcctc
     9061 accaaatatg tgttgctgaa tccgtatatc tggctgcttt cgttttgcta tgtgctggtc
     9121 tatgtggtcc gggcggcgat caacgactgg ggcaatttgt atatgtccga gacgctgggc
     9181 gtcgatctgg tcacggcgaa tacggcagtg acgatgtttg aactgggtgg atttatcggt
     9241 gcgctggtag cgggttgggg ctcggacaaa ttgtttaacg gcaaccgagg gccgatgaat
     9301 ttgattttcg ccgccggaat tttgctttca gtcggctccc tgtggctgat gccatttgcc
     9361 agctacgtga tgcaggcaac ctgcttcttc accattggtt tttttgtctt tggcccacag
     9421 atgttaatcg gtatggcggc ggcagagtgt tcccacaaag aggcggcagg ggcggcgacg
     9481 gggtttgtcg gcttgtttgc ttatctgggg gcgtcgcttg ctggttggcc gctggcgaaa
     9541 gtactcgata cctggcactg gagcggattt tttgtggtta tctctatcgc cgccgggatt
     9601 tccgcactgc tgttactgcc ctttttgaac gcccagacac cgcgcgaagc gtgatgcatc
     9661 tcaccttttc acttcatatc cggcaaaact aagaaatttt ccaggttttg cctggacgct
     9721 atctcaggcc tgatttgctg ctgattttta caatgcatgc ctcacgcagg tattcatttc
     9781 aggagtaacc catgctggct ttcctaaacc aggttcgcaa gccgaccctg gaccttccgc
     9841 tcgaagtgcg gcgcaaaatg tggttcaaac cgttcatgca atcctacctg gtggtcttta
     9901 tcggctacct gacgatgtac ctgattcgca agaactttaa catcgcgcag aacgatatga
     9961 tttcgaccta cgggttgagc atgacgcagc tggggatgat cggcctgggt ttctccatca
    10021 cttatggcgt gggtaaaacg ttggtttcat actacgccga cggcaaaaac accaaacaat
    10081 tcctgccgtt catgctgatc ctgtctgcca tttgtatgct gggcttcagt gccagtatgg
    10141 gcagcggctc ggttagcctg ttcctgatga ttgccttcta cgccttaagc ggctttttcc
    10201 agagtaccgg cggttcgtgc agttactcca ccatcaccaa atggacgccg cgtcgtaaac
    10261 gcgggacatt cctcggtttc tggaatattt ctcacaacct tggcggtgca ggcgcagcag
    10321 gtgtggcgct gttcggggca aattacctgt tcgatggcca tgtcatcggc atgtttatct
    10381 tcccgtcgat tatcgcgctg attgtcggtt ttatcggcct gcgttacggc agcgactccc
    10441 cagaatctta tggcctcggc aaagctgaag aactgttcgg cgaggagatc agcgaagagg
    10501 acaaagagac agaatctacc gatatgacca agtggcagat ctttgttgag tatgtgctga
    10561 aaaacaaagt gatctggctg ctgtgcttcg ccaacatttt cctctatgtg gtacgtattg
    10621 gtatcgacca gtggtcaacc gtatacgcgt tccaggaact gaaactctct aaagcggtgg
    10681 cgattcaggg ctttacgctg tttgaagctg gtgcgctggt cggtacgctg ctgtggggct
    10741 ggctctctga cctggcgaac ggtcgccgtg gcctggtggc ctgcatcgcg ctggcgctga
    10801 ttatcgccac gctcggtgtg tatcaacatg ccagcaacga atatatctat ctggcttctc
    10861 tctttgcgtt gggtttcctg gtctttggcc cgcaattgtt gattggtgtg gctgctgttg
    10921 gctttgtacc taaaaaagcg attggcgctg ccgatggtat taaaggcacc tttgcttacc
    10981 tgattggtga cagctttgcc aagttaggtc tgggaatgat tgccgatggg acgccggtat
    11041 tcggccttac cggctgggca ggcaccttcg ccgcacttga tatcgccgcg attggttgta
    11101 tctgcctgat ggcgatagtg gcggtgatgg aagaacgcaa aatccgccgc gagaaaaaaa
    11161 ttcagcagtt gacagtggca taaacgtaac tggtgacttt tgcccggcat gacgccgggc
    11221 ttttttatta ttccgtgact tccagcgtag tgaagacaaa cttctcgcca tcaaatagcc
    11281 cctgactggt tagtttgagc gcggggatca ctggcagaga aagaaacgcc atctgaataa
    11341 acggctcatc gggtaacgga ccgcattcac gggcggcggc tttcaaggcg tcaatttgtt
    11401 ccgccagcga ctgcgccgtg tcggtgctca tcaggccggc aatgggcaac ggcagatgac
    11461 tttggacctg gccgttacgt accacgcaca gcccgccgcc atcctgaatc acctgataga
    11521 ccgccagcgc catctcttcg gcactgcgac cgatcaccac aatattatgg ctgtcatggc
    11581 tgaccgtcgc agccagcgca ccttcattca gtccaaagcc gccaagcaaa ccacaagccg
    11641 gagccagccg ttgcccgtaa cgctcaagta cggcaataaa gcacacatca tcgcgatcaa
    11701 aaccattttc gctgtagacg ctggagtggg agtgcgtaat caattcgtta tggatgacgt
    11761 caatgacccg atagcgtttt ccgggcgtaa attgcagggc aaagtcgctg gcggaaactg
    11821 gctggcgggc aatggtgttg ccatatggcg gagcggattg tgccagtctc gccgactctt
    11881 ccgcctgtaa ggtttgcgca tcaatcggct cgcctttcac cagtacctgc tgcaccgtga
    11941 ccttacgcgc atcgctcaac aggacgatat cggcctgctt gccgggtgcc agtaagtcga
    12001 ggtgattcag accaaagtgg cgcgccgtcg accagctggc gacgcgatat gccacatgca
    12061 gcggcacatt gtgttgttcg atcaggcggc gaattaaggc atcgatgtgt ccttcatggg
    12121 cgatctccca cgggttacgg tcatcggtac agagcatgca ttgcgggctg ttaaattcgt
    12181 tgatcaacgg tgccagcgcg ttgagattgc gggcagcgga cccttcgcgg atcatcaacg
    12241 acatgccgag ttgtaatttc cggcgtcctt cttccagctg ataactttcg tggcagtttt
    12301 caatacccgc agtaatatag gcgttaagtt ctttaccacc caaacccggg cagtgaccgt
    12361 ccagcgtcag gtggcgaaat gcatccagtt tatcgagcag cgcattctgc ccgctaatta
    12421 cgccagggta gtccatcatt tctgcaaggc cggtaacctg cggatggtcc cgccaggcga
    12481 gcatctgttc aagggtaaaa ctggcaccgt taacatcgca gccttccagg gcgggtacgc
    12541 aagagctgac ctgtaagtac tggttttgcc ttgcctgttc ggcacagcgg gcaaaccagg
    12601 cgaatccggc ttctcccatc acgttgacga tttcatgagg gtcgcaaata acggtcgtca
    12661 ggccgcgcgg cagggtagcg gtttcaaagg tgaccggcgt catcatgctg gattcaatat
    12721 gcaggtgagc atcaataaac cctggcaccg ccgttgcgcc gcgagcatca atccgctgca
    12781 aagccggagc atcagcgtat tctgcgccaa caccggcaat gtaacgtcct ttaatcacaa
    12841 ttgggccgga aatttctccg ccattgatca ggtcgagaat agagacatta tcaataatat
    12901 aatcggcaac agcgtcgcca cgggaaacgg ctaacaattc ctggtattca gcccggctaa
    12961 tgtgatgaaa tttatggtta atggaattat tcatattttt ctcattttga ttttatcaat
    13021 ttgattatta tttatcataa agaaacgtcg cgagattatt aaagaatatc tattaatgtg
    13081 caattgaaat gtgataatta tcactgaacc gttgttgtca tttgttttac aaaagcaagg
    13141 gattaaatct cctccaatgg acaaaaaaat gaataatgac aataccgatt acgtgagtaa
    13201 tgaatcaggg atgctttcgc gattatttaa actacctcag catgggacca ccgtccgcac
    13261 agaattgatt gcggggatga ccactttttt aaccatggtg tacatcgttt ttgtgaaccc
    13321 gcaaatcctc ggcgcggcac aaatggaccc gaaagtggtg tttgttacca cctgtttgat
    13381 tgccggtatc ggcagtattg cgatggggat atttgctaac ttacccgtgg cgctggctcc
    13441 ggcaatgggg ctgaacgcct tctttgcctt cgtggtcgtg ggggcgatgg gcatctcctg
    13501 gcagaccggg atgggcgcaa tattctgggg cgcagttgga ctatttttgc tcacgctgtt
    13561 tcgtatccgg tactggatga tctcc
//
LOCUS       DADMJE010000109        13584 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.110, whole genome shotgun sequence.
ACCESSION   DADMJE010000109 DADMJE010000000
VERSION     DADMJE010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13584
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.110"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JN001_002841"
     CDS             complement(241..1614)
                     /gene="cobA"
                     /locus_tag="JN001_002841"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HAY9054011.1"
                     /translation="MDHLPIFCQLRDRDCLIVGGGDVAERKARLLLDAGARLTVNALA
                     FIPQFTAWADAGMLTLVEGPFDESLLDTCWLAIAATDDDTLNQRVSEAAEARRIFCNV
                     VDAPKAASFIMPSIIDRSPLMVAVSSGGTSPVLARLLREKLESLLPLHLGQVAKYAGQ
                     LRGRVKQQFTTMSERRRFWEKLFVNDRLAQSLANNDQKAITETTEQLINEPLDHRGEV
                     VLVGAGPGDAGLLTLKGLQQIQQADVVVYDRLVSDDIMNLVRRDADRVFVGKRAGYHC
                     VPQEEINQILLREAQKGKRVVRLKGGDPFIFGRGGEELETLCNAGIPFSVVPGITAAS
                     GCSAYSGIPLTHRDYAQSVRLITGHLKTGGELDWENLAAEKQTLVFYMGLNQAATIQQ
                     KLIEHGMPGEMPVAIVENGTAVTQRVIDGTLTQLGELAQQMNSPSLIIIGRVVGLRDK
                     LNWFSNH"
     gene            complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JN001_002842"
     CDS             complement(1633..2439)
                     /gene="nirC"
                     /locus_tag="JN001_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026212.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite transporter NirC"
                     /protein_id="HAY9054012.1"
                     /translation="MFTDTINKCAANAARIARLSANNPLGFWVSSAMAGAYVGLGIIL
                     IFTLGNLLDPSVRPLVMGATFGIALTLVIIAGSELFTGHTMFLTFGVKAGSISHGQMW
                     AILPQTWLGNLVGSVFVAMLYSWGGGSLLPVDTSIVHSVALAKTTAPAMVLFFKGALC
                     NWLVCLAIWMALRTEGAAKFIAIWWCLLAFIASGYEHSIANMTLFALSWFGNHSEAYT
                     LAGIGHNLLWVTLGNTLSGAVFMGLGYWYATPKSNRPVADKFNQTETAAG"
     gene            complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JN001_002843"
     CDS             complement(2566..2892)
                     /gene="nirD"
                     /locus_tag="JN001_002843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase small subunit NirD"
                     /protein_id="HAY9054013.1"
                     /translation="MSQWKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN
                     IDPFFESSVLSRGLIAEHQGELWVASPLKKQRFRLSDGLCMEDEQFSVKHYEARVKDG
                     VVQLRG"
     gene            complement(2889..5432)
                     /locus_tag="JN001_002844"
     CDS             complement(2889..5432)
                     /locus_tag="JN001_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite reductase large subunit"
                     /protein_id="HAY9054014.1"
                     /translation="MSKVRLAIIGNGMVGHRFIEDLLDKSDAANFDITVFCEEPRIAY
                     DRVHLSSYFSHHTAEELSLVREGFYEKHGIKVLVGERAITINRQEKVIHSSAGRTVFY
                     DKLIMATGSYPWIPPIKGSDTQDCFVYRTIEDLNAIESCARRSKRGAVVGGGLLGLEA
                     AGALKNLGIETHVIEFAPMLMAEQLDQMGGEQLRRKIESMGVRVHTSKNTLEIVQEGV
                     EARKTMRFADGSELEVDFIVFSTGIRPRDKLATQCGLDVAPRGGIVINDSCQTSDPDI
                     YAIGECASWNNRIFGLVAPGYKMAQVAVDHILGSENAFEGADLSAKLKLLGVDVGGIG
                     DAHGRTPGARSYVYLDESKEIYKRLIVSEDNKTLLGAVLVGDTSDYGNLLQLVLNAIE
                     LPENPDSLILPAHSGSGKPSIGVDKLPDSAQICSCFDVTKGDLIAAINKGCHTVAALK
                     AETKAGTGCGGCIPLVTQVLNAELAKQGIEVNNNLCEHFAYSRQELFHLIRVEGIKTF
                     EELLAKHGKGYGCEVCKPTVGSLLASCWNEYILKPEHTPLQDSNDNFLANIQKDGTYS
                     VIPRSPGGEITPEGLMAVGRIAREFNLYTKITGSQRLAMFGAQKDDLPEIWRQLIEAG
                     FETGHAYAKALRMAKTCVGSTWCRYGVGDSVGLGVELENRYKGIRTPHKMKFGVSGCT
                     RECSEAQGKDVGIIATEKGWNLYVCGNGGMKPRHADLLAADIDRETLIKYLDRFMMFY
                     IRTADKLTRTAPWLENLEGGIDYLKAVIIDDKLGLNAHLEEEMARLREAVVCEWTETV
                     NTPSAQTRFKHFINSDKRDPNVQMVPEREQHRPATPYERIPVTLVEDNA"
     gene            complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JN001_002845"
     CDS             complement(5694..6875)
                     /gene="tsgA"
                     /locus_tag="JN001_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter TsgA"
                     /protein_id="HAY9054015.1"
                     /translation="MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFNLPVSS
                     MSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFLLMVLAVAGLMFSHSLALFSTA
                     MFILGVVSGITMSIGTFLITQMYEGRQRGSRLLFTDSFFSMAGMIFPMIAAFLLARSI
                     EWYWVYACIGLVYVAIFILTFGCEFPALGKHAPKTDAPVEKEKWGIGVLFLSVAALCY
                     ILGQLGFISWVPEYAKGLGMSLNDAGTLVSNFWMSYMVGMWAFSFILRFFDLQRILTV
                     LAGLAAILMYVFNTGTPAHMAWSILALGFFSSAIYTTIITLGSQQTKVPSPKLVNFVL
                     TCGTIGTMLTFVVTGPIVEHSGPQAALLTANGLYAVVFVMCFLLGFVSRHRQHNTLTS
                     H"
     gene            7146..7718
                     /gene="ppiA"
                     /locus_tag="JN001_002846"
                     /gene_synonym="rotA"
     CDS             7146..7718
                     /gene="ppiA"
                     /locus_tag="JN001_002846"
                     /gene_synonym="rotA"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000920493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase A"
                     /protein_id="HAY9054016.1"
                     /translation="MFKSTLAAMAAVFALSALSPAAMAAKGAPHVLLTTSAGNIELEL
                     DKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
                     NGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVAD
                     KISQVPTHDVGPYQNVPSKPVVILSAKVLP"
     gene            7823..7990
                     /locus_tag="JN001_002847"
     CDS             7823..7990
                     /locus_tag="JN001_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhfG family protein"
                     /protein_id="HAY9054017.1"
                     /translation="MKKLTDKQKSRLWELQRNRNFQASRRLEGVEMPLVTLTAAEALA
                     RLVELRRHYER"
     gene            7980..8582
                     /locus_tag="JN001_002848"
     CDS             7980..8582
                     /locus_tag="JN001_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative adenosine monophosphate-protein
                     transferase Fic"
                     /protein_id="HAY9054018.1"
                     /translation="MSDKFGEGRDPYLYPGLDIMRNRLNIRQQQRLEQAAYEMTALRA
                     ATIELGPLVRGLPHLRTIHRQLYQDIFDWAGQLREVDIYQGDTPFCHFAYIEKEGNAL
                     MQDLEEEGYLVGLEKTKFVERLAHYYCEINVLHPFRVGSGLAQRIFFEQLAIHAGYQL
                     SWQGIEKEAWNQANQSGAMGDLTALQMIFSKVVSEAGESE"
     gene            8614..9177
                     /gene="pabA"
                     /locus_tag="JN001_002849"
     CDS             8614..9177
                     /gene="pabA"
                     /locus_tag="JN001_002849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 2"
                     /protein_id="HAY9054019.1"
                     /translation="MILLIDNYDSFTWNLYQYFCELGADVLVKRNDALTLADIDALKP
                     QKIVISPGPCTPDEAGISLDVIRHYAGRLPILGVCLGHQAMAQAFGGKVVRAAKVMHG
                     KTSPITHNGEGVFRGLANPLTVTRYHSLVVEPGSLPACFDVTAWSETREIMGIRHRQW
                     DLEGVQFHPESILSEQGHQLLANFLHL"
     gene            9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JN001_002850"
     CDS             9263..10483
                     /gene="argD/dapC"
                     /locus_tag="JN001_002850"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     acetylornithine/succinyldiaminopimelate transaminase"
                     /protein_id="HAY9054020.1"
                     /translation="MAIEQTAITRATFDEVILPIYAPAEFIPVKGQGSRIWDQQGKEY
                     VDFAGGIAVTALGHCHPALVNALKTQGETLWHISNVFTNEPALRLGRKLIEATFAERV
                     VFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDG
                     FGPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVTASTPEFLQGLRELCDQ
                     HQALLVFDEVQCGMGRTGDLFAYMYYGVTPDILTSAKALGGGFPISAMLTTAEIASAF
                     HPGSHGSTYGGNPLACAVAGAAFDIINTPEVLEGIQAKRQRFVDHLQKIDQQYDVFSD
                     IRGMGLLIGAELKPHYKGRARDFLYAGAEVGVMVLNAGPDVMRLAPSLVVEDADIDEG
                     MQRFAHAVAKVVGA"
     gene            complement(10550..12640)
                     /locus_tag="JN001_002851"
     CDS             complement(10550..12640)
                     /locus_tag="JN001_002851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312236.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054021.1"
                     /translation="MWRRLIYHPDINYALRQTLVLCLPVAVGLMLGELRFGLLFSLVP
                     ACCNIAGLDTPHKRFFKRLIIGASLFATCSLLTQLLLAKDVPLPFLLTGLTLVLGVTA
                     ELGPLHAKLLPASLLAAIFTLSLAGYMPVWEPLLIYALGTLWYGLFNWFWFWIWREQP
                     LRESLSLLYRELADYCEAKYSLLTQHTDPEKALPPLLVRQQKAVDLITQCYQQMHMLS
                     AQNNTDYKRMLRIFQEALDLQEHISVSLHQPEEVQKLVERSHAEEVIRWNAQTVAARL
                     RVLADDILYHRLPTRFTMEKQIGALEKIARQHPDNPVGQFCYWHFSRIARVLRTQKPL
                     YARDLLADKQRRMPLLPALKSYLSLKSPALRNAGRLSVMLSVASLMGTALHLPKSYWI
                     LMTVLLVTQNGYGATRLRIVNRSVGTVVGLIIAGVALHFKIPEGYTLTLMLITTLASY
                     LILRKNYGWATVGFTITAVYTLQLLWLNGEQYILPRLIDTIIGCLIAFGGTVWLWPQW
                     QSGLLRKNAHDALEAYQEAIRLILSEDPQPTPLAWQRMRVNQAHNTLYNSLNQAMQEP
                     AFNSHYLADMKLWVTHSQFIVEHINAMTTLAREHRALPPELAQEYLQSCEIAIQRCQQ
                     RLEYDEPGSSGDANIMDAPEMQPHEGAAGTLEQHLQRVIGHLNTMHTISSMAWRQRPH
                     HGIWLSRKLRDSKA"
     gene            complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JN001_002852"
     CDS             complement(12691..13323)
                     /gene="crp"
                     /locus_tag="JN001_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cAMP-activated global transcriptional regulator
                     CRP"
                     /protein_id="HAY9054022.1"
                     /translation="MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIV
                     KGSVAVLIKDEEGKEMILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKK
                     FRQLIQVNPDILMRLSAQMARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTH
                     PDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAHGKTIVVYGTR"
BASE COUNT         3289 a         3494 c         3556 g         3245 t
ORIGIN      
        1 tccctatgta ttatatatta attaatattc attgattata tgaatataag cagactgctc
       61 gttaagaacg atacaggaat atttaattgg cgtcagtgag cgaatgactt aattttgtaa
      121 gtcgctgtaa cggtgaatat aacccattag cagataatat ttattaaggg gttatgtttt
      181 atttgctgaa tatataaaaa gagtcattaa gaaggccaga attctctggc ccgggttaaa
      241 ttaatggttg gagaaccagt tcagtttatc gcgcaggcca acaacccgac caataataat
      301 tagcgatgga ctgttcattt gctgagcaag ttcaccgagt tgcgtgagcg taccgtcaat
      361 cacgcgctgc gtgactgccg ttccgttttc gacaattgcc accggcattt cgccaggcat
      421 accgtgttca atcagctttt gctgaatagt cgcggcctga ttcaacccca tatagaacac
      481 cagcgtctgt ttttctgccg ccaggttttc ccagtccagc tcgccaccgg tttttaagtg
      541 tccggtaatt aagcgtacgc tctgggcata atcgcgatgc gtgagtggaa tacccgaata
      601 ggcagagcaa ccagaagctg cggtaatacc cggaaccacc gagaacggaa tacccgcgtt
      661 gcacagtgtt tccagctctt cgccaccacg gccaaaaata aacggatcgc cacctttcag
      721 ccgcaccacg cgtttgcctt tttgcgcttc ccgcagcagg atctggttaa tctcttcctg
      781 cggtacacag tggtatcccg cgcgtttgcc gacgaaaacg cgatcagcat cgcggcgtac
      841 cagattcata atatcgtcag aaaccagacg gtcgtagacc accacatctg cctgctgaat
      901 ttgttgcagt cctttcagcg tcagcagccc ggcatcgccc ggacctgcac caaccagcac
      961 cacttcaccg cgatggtcga gcggttcgtt gattaactgt tcggtcgttt cagtaatggc
     1021 tttctgatcg ttgtttgcca gcgactgcgc caggcggtcg ttaacgaaca atttctccca
     1081 gaaacggcga cgctcactca tcgtggtgaa ctgttgtttc actcgcccgc gtaattgccc
     1141 ggcatatttc gccacctggc ccagatgcaa cggcagcagt gattcgagtt tttcgcgcaa
     1201 caggcgcgcc agaaccggag aggtgccgcc agaggagacc gctaccatta gcggtgagcg
     1261 gtcaataatc gacggcataa taaagctggc ggctttcggc gcatcgacta cgttacagaa
     1321 gatgcgacga gcttcagcgg cttcgctgac gcgctggtta agcgtgtcat catccgtcgc
     1381 tgcaatcgcc agccagcagg tgtcgagaag gctttcatca aatggccctt cgacgagggt
     1441 taacatgcct gcatctgccc atgcggtgaa ctgtggaata aacgctaatg cattcaccgt
     1501 taagcgagcg cctgcgtcta acagcaacct tgctttgcgt tccgcgacat caccaccgcc
     1561 gacaatcaga cagtcgcgat cgcgtaattg gcaaaatata ggcaaatgat ccacgtaaaa
     1621 accccttagt aattaaccgg cagccgtttc agtttgatta aatttgtccg caaccggacg
     1681 attcgatttc ggcgtagcat accaataacc caatcccatg aatacggcac ctgataaagt
     1741 attacccagc gtcacccaca gcaggttatg accaataccc gccagcgtgt aggcttcgct
     1801 gtggttgccg aaccaggaga gcgcgaacag cgtcatgtta gcgatagagt gctcgtagcc
     1861 ggacgcgata aatgccagca gacaccacca gatagcgata aatttcgccg ccccttcagt
     1921 gcgcagcgcc atccagattg ccaggcaaac cagccagtta cacaatgcac ctttgaagaa
     1981 gagtaccatt gccggtgcag tggttttagc cagcgcgacg gagtgaacga tgctggtatc
     2041 taccggcagc aggctaccgc cgccccagct atagagcatg gcaacgaaga cggaaccgac
     2101 caggttaccc agccaggttt gcggcaggat tgcccacatt tgcccgtggc tgatgctgcc
     2161 cgcttttacc ccaaaggtga ggaacatggt gtgtccggtg aacagttcag aaccggcgat
     2221 aatcaccagc gttaaggcga taccaaaggt cgcgcccatc accagcggac gtacggacgg
     2281 gtcgagcaaa ttaccgagcg tgaaaatcaa gatgatccca agacccacat acgcgcccgc
     2341 catggcggag ctgacccaaa agccgagcgg gttatttgcc gacaggcgtg caatgcgcgc
     2401 agcgttagcc gcacacttat taatagtgtc tgtaaacatt tgattatcct ttaaaaaata
     2461 aaaacaaaaa aataaaacaa aaagtttaaa aaatgtcctg caatataccg aaggtaatta
     2521 caggaccatg caaaaagggg aggcattgcg cctcccgtta aaacattaac cgcgcagctg
     2581 caccacgccg tctttcactc gtgcttcgta atgtttgacg gaaaactgtt cgtcttccat
     2641 gcacaagcca tcacttaagc gaaaacgctg ttttttcagc gggctggcga cccacagctc
     2701 gccctggtgt tccgcaatca gcccgcgtga cagcacgctg gactcgaaga acggatcgat
     2761 gttgctgatc gcaaacacct ggtcgctgtg atacgggcgg aaaatcgcga cctgctcgtc
     2821 gcctaacagc gcgcagacgc cggtttcagg caggatgtca tcgattttgc agatgtcttt
     2881 ccactggctc atgcgttgtc ctccaccaga gttaccggga tacgttcata cggcgttgcc
     2941 ggacggtgct gttcgcgctc tggtaccatc tgcacgttcg ggtcacgctt gtcgctgttg
     3001 atgaagtgtt tgaagcgagt ctgcgcggac ggtgtattga ccgtttcagt ccactcacac
     3061 actaccgctt cacgcaggcg cgccatctct tcttccagat gagcgttcag ccccagtttg
     3121 tcgtcaatga tcaccgcttt caggtaatcg atgccgcctt cgaggttttc taaccacggc
     3181 gcggtacgcg tcagtttgtc ggcggtacgg atgtagaaca tcatgaagcg gtcgagatat
     3241 ttgatcagcg tttcgcgatc gatatcagct gccagcagat ccgcatgacg cggtttcatg
     3301 ccgccgttgc cgcaaacata caggttccag cctttttcag tggcgataat acccacgtct
     3361 ttaccctgag cttctgaaca ttcacgggta cagccggaga caccgaactt cattttgtgc
     3421 ggcgtacgga tgcctttgta gcggttttcc agttccacgc cgaggccgac gctgtcgcca
     3481 acgccgtagc ggcaccaggt gctacccacg caggttttcg ccatacgcag tgctttcgca
     3541 taggcatgac cggtttcgaa gccggcttca atcagctgac gccagatctc tggcagatcg
     3601 tctttctgtg cgccaaacat cgccaggcgc tgggaaccgg tgattttggt gtagagatta
     3661 aattcacgcg cgatacgacc cactgccatc agcccttccg gggtgatttc accgcccgga
     3721 gaacgcggga tcaccgagta ggtcccgtct ttctggatgt tagcgaggaa gttgtcgtta
     3781 gaatcttgca gcggagtatg ttctggcttc agaatgtatt cgttccagca ggaggccagc
     3841 agcgaaccga cggtcggttt acaaacttca caaccgtagc ctttgccgtg tttcgccagc
     3901 agttcttcga aggttttaat gccttcaacg cggatcaaat ggaacagttc ctgacgcgaa
     3961 taagcaaagt gttcgcacag gttgttgtta acttcgatgc cctgtttcgc cagttccgcg
     4021 ttcagtacct gagtgaccag cgggatacag ccaccgcagc cagtacccgc tttggtttca
     4081 gctttcagcg ccgcaactgt gtggcagcct ttgttgatgg cagcaatcag atcaccttta
     4141 gtgacgtcga agcaggagca gatttgcgcg ctgtccggca gtttatcaac accgatagac
     4201 ggcttaccgc tacccgagtg cgccggcaga atcagagaat ccgggttttc cggcagctcg
     4261 atagcattca gcaccagttg cagcaagtta ccgtagtcgc tggtatcgcc caccagtacc
     4321 gcaccgagca gggttttgtt gtcttcgctg acgatcaggc gtttgtagat ctctttgctt
     4381 tcgtcgaggt aaacgtagct acgtgcgcca ggcgtgcgac catgagcatc accaataccg
     4441 cctacgtcca cgcccagcag tttcagcttg gcgctaaggt cagcaccttc aaaggcgttt
     4501 tcgctaccga gaatatggtc aacggcgacc tgcgccattt tgtagccagg tgctaccaga
     4561 ccaaatatac ggttgttcca gcttgcgcat tcaccgatag cgtagatatc cggatcggaa
     4621 gtttggcagg aatcattaat gacgataccc ccacgcggag caacgtccag accacactgg
     4681 gttgccagct tatcgcgcgg acggataccg gtagagaaga cgataaagtc gacttccagt
     4741 tcgctgccgt cggcaaaacg catggtttta cgtgcttcga caccttcctg cacaatctca
     4801 agggtgtttt tgctggtgtg aacgcgcacg cccatacttt cgattttgcg acgcagctgc
     4861 tcgccaccca tctgatcaag ctgttccgcc atcagcatag gggcaaattc gataacgtgg
     4921 gtttcaatac ctaagttttt cagcgcgcca gcggcttcca gacctaacag gccgccacca
     4981 acaacggcac cgcgtttgct gcgacgggcg caggattcaa tggcgttgag gtcttcaatg
     5041 gtgcgataga caaagcagtc ctgagtatca gaacctttga ttggtgggat ccacgggtag
     5101 gaaccggttg ccatgatcag cttgtcataa aaaacggtac gtccggcgct ggagtgaatc
     5161 accttctcct gacggttgat ggtgatagcg cgttcgccga ccagaacttt gatgccgtgt
     5221 ttctcgtaga agccttcgcg caccagcgac agctcttcgg cggtgtggtg agagaagtaa
     5281 gacgagaggt gtacgcggtc ataagcgatg cgcggttctt cacagaaaac ggtaatatca
     5341 aagttggccg catcagattt atcaagaaga tcttcgataa agcgatggcc gaccataccg
     5401 ttaccgataa ttgcgagtct gactttgctc atttttgcct cgatttcttt tctattaccg
     5461 cctaccttaa cgattcagca accccgctta ttgatgtaaa tcaaattcac ctttatatac
     5521 cccttaaggg gtatattgct gatttgtata aattttctta agtcacggaa ttgtctgaca
     5581 tttcatgttt gtgcaaaaaa tagacaaaat gaacgggttt atagaaatag atgcacgtag
     5641 cggggttaga gaggaaaagg ccggacgacg atagtgccgt ccggcattag caattaatga
     5701 gaggtcaggg tgttatgctg acggtgacgg ctgacgaaac ctaacaggaa gcacatcaca
     5761 aagacgacag cgtacagacc gtttgctgta agcagtgccg cctgcggacc gctatgttca
     5821 acaatcgggc cggtaaccac aaaggtcaac atagtaccga tggttccgca ggtcaggaca
     5881 aagttaacca gttttggcga cggtactttg gtctgctgtg aacccagggt gatgatggtg
     5941 gtatagatcg cgctggagaa gaagcccaga gcgagaattg accacgccat atgtgctggt
     6001 gttccggtgt taaagacgta catcagaatc gcagccagac cagccagtac ggtcagaatg
     6061 cgttgcaaat caaagaagcg aagaataaag ctgaacgccc acatgccgac catgtatgac
     6121 atccagaagt tactcaccag cgtgcccgcg tcgttcaggc tcatgcccag gcctttggca
     6181 tactcaggca cccaggagat aaaacctaac tgaccgagga tgtagcacag cgccgcaaca
     6241 gagagaaaca gtacgccgat cccccacttt tctttctcta ccggagcatc cgtttttggt
     6301 gcatgtttgc ccagtgctgg gaactcacag ccgaaggtca gaataaaaat agcgacatac
     6361 accagcccga tgcaggcata aacccagtac cactcaatgc tgcgcgccag tagaaacgcg
     6421 gcgatcattg ggaaaatcat cccagccata ctgaagaagg agtcagtaaa taacaggcgg
     6481 gaaccgcgct gacgcccttc atacatttgt gttatcagga atgtaccaat cgacatagta
     6541 atgccgctga ccaccccgag aatgaacatc gccgtcgaga acagcgccag gctgtggctg
     6601 aacatcaaac cggcaaccgc cagcaccatc aggagaaagc caaaacgtaa ctgcgttttc
     6661 aacgggacga tttccatcag ccaggcgttg aggaagatag agattaaaat gccggcgttg
     6721 aggaaggtga aggtgttact catactggaa acaggcagat tgaaataatc ggcgatattt
     6781 cccatcacca tcccggtgac aataaccaac gcaccagtca gtgcgtagga gagaaagcta
     6841 atccatgtga gcttgatgcg attgctgtta gtcatgattg gcctgcgttc aaaaataaaa
     6901 tggcatagcg ggatatgccg cgagcgggtg attttaggtg attttgtgat ctgtttaaat
     6961 gttttattgc aatcggttgc taaattgcat tttaagaagt gatcttgatc acggaataaa
     7021 aagtgatcgt caggttacat atatttcaga tacgtaaaat taggtaaagg gatggccttg
     7081 ttcttgaagg ctatttagaa tctcttcact tgcttttttt ctgctctgtt tgttaaggaa
     7141 atctcatgtt caaatcgacc ctggcggcga tggctgctgt tttcgctctt tctgctcttt
     7201 ctcccgcagc aatggcagcg aaaggggccc cgcacgtatt gttgacaacc tcagctggta
     7261 acatcgaact ggagctggat aaacaaaaag cgccagtgtc tgtgcaaaac tttgtcgatt
     7321 atgtgaacag cggtttttat aacaacacta cctttcaccg cgtcattcct ggctttatga
     7381 ttcagggcgg cggtttcacc gagcagatgc agcagaaaaa accaaacccg ccaatcaaaa
     7441 atgaagccga taacggcctg cgcaacacgc gtggcaccat cgcgatggcg cgtaccgctg
     7501 acaaagatag cgccaccagc cagttcttta tcaacgttgc cgataacgcc ttccttgacc
     7561 atggtcagcg tgatttcggt tacgcggtat ttggtaaagt ggtgaaaggc atggacgtgg
     7621 ccgataagat ttcccaggtg ccgactcatg acgttggtcc gtaccagaat gtgccgtcaa
     7681 aaccggtagt tatcctttcc gctaaagtcc tgccgtaatg atttctcgcg cgggcaatct
     7741 tgcccgcgct tctgctctcc cggcgtaacc cggatttgcc gcttatactt gtggcaaatg
     7801 gacacgttca gggaggcatc aagtgaagaa actcaccgat aagcaaaagt cccgtctctg
     7861 ggagcttcag cgtaatcgta atttccaggc cagtcgccgt cttgaaggcg tcgagatgcc
     7921 tttagtcact cttactgccg cagaggcttt agcgcgcctt gtagagctga ggaggcacta
     7981 tgagcgataa attcggcgaa gggcgcgatc cgtatcttta tccaggcctt gatatcatgc
     8041 gtaaccggct gaacatccgc cagcaacaac ggctggaaca ggccgcttac gaaatgacgg
     8101 cgctgcgtgc tgcgaccatt gagcttggtc cgctggtgcg cggtttaccg catttgcgaa
     8161 ctatccatcg ccagctgtat caggatattt tcgactgggc agggcaactg cgtgaagttg
     8221 atatttatca gggcgatacg ccgttctgcc actttgctta tatagaaaaa gagggcaatg
     8281 ccctgatgca ggatctggag gaagaaggtt atctggttgg cctggagaaa acgaagttcg
     8341 tcgagcggct ggcgcattac tattgtgaaa tcaacgtgct gcatcccttc cgggtgggaa
     8401 gtggtctggc acagcggatc ttcttcgagc aactggcgat tcatgccgga tatcaactga
     8461 gctggcaggg tatcgaaaaa gaggcctgga atcaggcaaa tcagagtggg gcaatggggg
     8521 atctcaccgc actgcagatg atatttagca aagtggtaag cgaagccggg gaatctgagt
     8581 aaaatagcgc ggttctttcg taccggagcc gccatgatcc tgcttattga taactacgat
     8641 tcttttacct ggaacctcta ccagtacttt tgtgaactgg gggcggatgt gctggttaag
     8701 cgcaacgatg cgttgacgtt ggcggatatc gacgccctta aaccacaaaa aattgtcatc
     8761 tcacccggcc cctgtacgcc agatgaagcc gggatctccc ttgacgttat tcgccactat
     8821 gccgggcgct tgccgattct tggcgtctgc ctcggtcatc aggcaatggc gcaggcattt
     8881 ggcggtaaag ttgtgcgcgc cgcaaaggtc atgcacggca aaacctcgcc gattacacat
     8941 aacggtgagg gcgtatttcg ggggctggca aatccactta ccgtgacacg ctaccattcg
     9001 ctggtggtgg aacctggctc attaccagcg tgctttgacg tgacggcctg gagcgaaacc
     9061 cgcgagatta tggggattcg ccatcgccag tgggatctgg aaggtgtgca gttccatcca
     9121 gaaagtattc ttagcgaaca aggacatcaa ctgctggcta atttcctgca tctctgattt
     9181 ccgattgcca ttcagtgatt ttttatgcat attttgtgat tataatttca tatttattta
     9241 tgcgtaacag ggtgatcatg agatggcaat tgaacaaaca gcaattacac gcgcgacttt
     9301 cgatgaagtg atcctgccga tttatgctcc ggcagagttt attccggtaa aaggtcaggg
     9361 cagccgaatc tgggatcagc aaggcaagga gtatgtcgat ttcgcgggtg gcattgcagt
     9421 tacggcgttg ggccattgcc atcctgcgct ggtgaacgcg ttaaaaaccc agggcgaaac
     9481 tctgtggcat atcagtaacg ttttcaccaa tgaaccggcg ctgcgtcttg ggcgcaaact
     9541 gattgaggcg acgtttgccg aacgcgtggt gtttatgaac tccggcacgg aagctaacga
     9601 aaccgccttt aaactggcac gccattacgc ctgtgtgcgt catagcccgt tcaaaaccaa
     9661 aattattgcc ttccataacg cttttcatgg tcgctcgctg tttaccgttt cggtgggtgg
     9721 gcagccaaaa tattccgacg gctttgggcc gaaaccggca gacatcatcc acgttccctt
     9781 taacgatctc catgcagtga aagcggtgat ggatgatcac acctgtgcgg tggtggttga
     9841 gccgatccag ggcgagggcg gtgtgacggc atcgacgcca gagtttttgc agggcttgcg
     9901 cgagctgtgc gatcaacatc aggcattatt ggtgtttgat gaagtgcagt gcgggatggg
     9961 gcggactggc gatttgtttg cttacatgta ctacggtgtg acgccggata ttctgacttc
    10021 tgcgaaagcg ttaggcggcg gcttcccgat tagcgccatg ctgaccacgg cggaaattgc
    10081 ttctgcgttt catcctggtt ctcacggttc cacctacggc ggtaatcctc tggcctgtgc
    10141 agtagcgggc gcggcgtttg atatcatcaa tacccctgaa gtgctggaag gcattcaggc
    10201 gaaacgccag cgttttgttg accatttgca gaagatcgat cagcagtacg atgtgtttag
    10261 cgatattcgc ggtatggggc tgttaattgg cgcggagctg aaaccacact acaaaggtcg
    10321 ggcgcgtgat ttcctgtatg cgggtgcaga ggttggcgta atggtgctga atgccggacc
    10381 ggatgtgatg cgtttagcac cgtcgctggt ggtggaagat gcggatatcg atgaagggat
    10441 gcaacgtttc gcccacgcgg tggcgaaggt ggttggggcg taaataagac gcatcaggca
    10501 aaatatgtcg gatgcggcgt gaatgcctta tccgatggtt tagcctgtat tacgccttcg
    10561 aatcccgcaa cttgcgactc agccaaatcc cgtgatgcgg tcgctgacgc catgccatcg
    10621 acgaaatggt gtgcatggtg ttcagatgac caataacccg ctgtaaatgc tgctccagcg
    10681 tacctgccgc gccttcgtgc ggctgcatct ccggcgcatc catgatattg gcatcgccag
    10741 aactacccgg ttcgtcatac tccagtcgct gctgacaacg ctgaatggcg atttcacaag
    10801 actgtaaata ctcttgtgcc agttcaggtg gcaatgcccg gtgttcccgc gccagcgtgg
    10861 tcatggcatt aatatgctca acaataaact ggctgtgcgt tacccacagt ttcatatctg
    10921 ccagataatg gctgttaaac gccggttcct gcatcgcctg attcaatgag ttatacagag
    10981 tgttatgtgc ctgatttacc cgcattcgct gccaggccag tggcgtaggt tgcggatcct
    11041 cgctaagaat caagcgaatc gcttcctgat aggcttctaa agcgtcatgg gcgtttttac
    11101 gcaataaccc gctctgccac tgcggccaca gccagacagt accgccgaaa gcaattaaac
    11161 aaccaataat ggtatcgata agacgcggaa ggatgtattg ctcgccgttc aaccacaata
    11221 gttgcagggt atacactgcg gtaatagtaa aaccgaccgt cgcccagccg tagtttttgc
    11281 gcaatatcag gtagctggcg agggtggtaa tcagcatcaa cgtcagggtg taaccttcgg
    11341 gaattttaaa gtgcagcgcc acgcccgcaa tgattaaccc gaccacggtt cccacggagc
    11401 gattcacaat cctcagacgg gttgcgccat agccattttg tgtcaccagc aataccgtca
    11461 tcaggatcca gtacgacttc ggcagatgca gcgcggtgcc catcaggctg gcaacgctta
    11521 acatcacact gagtcgtccg gcattgcgta gcgccggaga ctttagtgac agataacttt
    11581 tcagcgcagg aagtaatggc attcgccgct gtttatcggc cagtaagtca cgggcataga
    11641 gcggtttttg ggtgcgcagc acgcgggcga tgcggctgaa atgccagtag cagaattgcc
    11701 caaccggatt atccggatgc tggcgggcga ttttttccag tgcgccaatt tgcttttcca
    11761 tcgtaaaacg cgttggcagg cgatggtaaa gaatgtcatc agccagcacg cgcaggcgag
    11821 cggcgacggt ttgcgcattc cagcggataa cttcttccgc atggctacgc tcgaccagct
    11881 tttgcacctc ttccggctga tgcaaactga ccgaaatatg ttcctgtaaa tccagcgcct
    11941 cctggaaaat acgcagcatc cgcttgtagt cagtattatt ttgcgcggaa agcatatgca
    12001 tttgctgata gcactgggta attagatcga ccgctttttg ctggcgcacc agcagcggcg
    12061 gcagcgcttt ttcagggtcg gtgtgctggg taagcaggct gtatttggct tcacaataat
    12121 ctgccagttc acggtacagc agacttagtg actcgcgcag cggttgttcg cgccagatcc
    12181 agaaccaaaa ccagttaaac aatccgtacc agagagtgcc caacgcatag atgagcaacg
    12241 gttcccagac cggcatgtat cccgccagac tgagggtaaa aatggctgcc agcagcgatg
    12301 cgggaagcaa ttttgcgtgc aatggcccca actcagcagt gacgccaagt accagcgtta
    12361 atccggtcag caaaaagggc aggggaacat cttttgccag tagcagctgt gtcagtaagc
    12421 tacaggtggc aaacagcgac gcaccaatga ttaagcgttt gaaaaaacgt ttatgaggcg
    12481 tatcaaggcc cgcaatattg caacaggcag gaacgagaga gaagagcaga ccgaatcgta
    12541 attcgccaag cattaaccca acggccacgg gcaaacatag caccagcgtt tgtcgaagtg
    12601 catagttgat atcggggtga taaatcagtc tgcgccacat cgggggaaac aaaatggcgc
    12661 gctaccaggt aacgcgccac tccgacggga ttaacgagtg ccgtaaacga cgatggtttt
    12721 accgtgtgcg gagatcaggt tctgatcttc aagcatcttc agaatgcgtc ccacggtttc
    12781 acgagaacag ccgacaatct gaccgatttc ctgacgggta attttgattt gcataccgtc
    12841 cgggtgagtc atagcgtctg gttgttttgc cagattcagc agagtctgtg caatgcggcc
    12901 cgtcacgtcg aggaacgcca ggttgcccac tttctctgaa gtgacttgca gacgacgcgc
    12961 catctgtgca gacagacgca tcagaatgtc cgggtttacc tgaatcaatt ggcgaaattt
    13021 tttgtacgaa atttcagcca cttcacaggc ggttttcgca cgtacccatg cgctacgttc
    13081 ctggccctct tcaaacaggc ccagttcgcc aataaaatca ccctgattca gataggagag
    13141 gatcatttct ttaccctctt cgtctttgat cagcactgcc acagagcctt taacgatgta
    13201 gtacagcgtt tccgcttttt caccctggtg aataagcgtg ctcttggatg ggtacttatg
    13261 aatgtggcaa tgagacaaga accattcgag agtcgggtct gtttgcggtt tgccaagcac
    13321 catgcgcggt tatcctctgt tataagcttt ctccagagcc agataacgcc gctgtctctg
    13381 gattgccgaa atatgcttcc cgctacctgg gaaggggcta tcaactgtac tgcacggtaa
    13441 tgtgacgtcc tttgcataca tgcagtacat caatgtatta ctgtagcatc ctgactgttt
    13501 tagcatagct ttcgctttgt gtctcctggt gtctcgcttc agcatgaccc aggtcgcctt
    13561 ccgttgcgcg atttggttag tacg
//
LOCUS       DADMJE010000110        13518 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.111, whole genome shotgun sequence.
ACCESSION   DADMJE010000110 DADMJE010000000
VERSION     DADMJE010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13518
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.111"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..184
                     /locus_tag="JN001_002853"
     CDS             <1..184
                     /locus_tag="JN001_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY9054023.1"
                     /translation="WSLAAGANPSFIASQMGHTNAQMVFNVYGAWMKDNNHEQIELLN
                     RRLSESVPCMPHKKAG"
     gene            205..906
                     /gene="mlrA"
                     /locus_tag="JN001_002854"
     CDS             205..906
                     /gene="mlrA"
                     /locus_tag="JN001_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MlrA"
                     /protein_id="HAY9054024.1"
                     /translation="MGLPLIPVTLRAWQRRYGLLKPQRTDGGHRLFNDADIDRIREIK
                     RWIDNGVQVSKVKMLLSNENVDVQNGWRDQQETLLTYLQSGNLHSLRTWIKERGQDYP
                     AQTLTTHLFIPLRRRLQCQQPTLQALLAILDGVLINYIAICLASARRKQGKDALVVGW
                     NIQDTTRLWLEGWIASQQGWRIDVLAHSLNQLRPELFEGRTLLVWCGENRTSAQQQQL
                     TSWQEQGHDIFPLGI"
     gene            966..1073
                     /locus_tag="JN001_002855"
     CDS             966..1073
                     /locus_tag="JN001_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohO"
                     /protein_id="HAY9054025.1"
                     /translation="MRIAKIGVIALFLFMALGGIGGVMLAGYTFILRAG"
     gene            complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JN001_002856"
     CDS             complement(1054..1785)
                     /gene="yehW"
                     /locus_tag="JN001_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehW"
                     /protein_id="HAY9054026.1"
                     /translation="MKMLRDPLFWLIALFVALIFWLPYSQPLFAALFPQLPRPVYQQE
                     SFAALALAHFWLVGISSLFVVIIGTGAGIAVTRPWGAEFRPLVETIAAVGQTFPPVAV
                     LAIAVPVIGFGLQPAIIALILYGVLPVLQATLAGLGAIDASVTEVAKGMGMSRGQRLR
                     KVELPLAAPVILAGVRTSVIINIGTATIASTVGASTLGTPIIIGLSGFNTAYVIQGAL
                     LVALAAIIADRLFERLVQALSQHAK"
     gene            complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JN001_002857"
     CDS             complement(1790..2716)
                     /gene="yehX"
                     /locus_tag="JN001_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter ATP binding
                     protein YehX"
                     /protein_id="HAY9054027.1"
                     /translation="MIEFSHVSKLFGAQKAVNDLNLNFQEGSFSVLIGTSGSGKSTTL
                     KMINRLVEHDSGVIRFAGEEIRSLPVLELRRRMGYAIQSIGLFPHWSVAQNIATVPQL
                     QKWSRARIDDRIDELMALLGLESNLRERYPHQLSGGQQQRVGVARALAADPQVLLMDE
                     PFGALDPVTRGALQQEMTRIHRLLGRTIVLVTHDIDEALRLAEHLVLMDHGEVVQQGN
                     PLTMLTRPANDFVRQFFGRSELGVRLLSLRSVADYVCREERAEGEALAEEMTLRDALS
                     LFVARGCEVLPVVNTQGQPCGTLHFQDLLEEA"
     gene            complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JN001_002858"
     CDS             complement(2709..3866)
                     /gene="yehY"
                     /locus_tag="JN001_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter permease YehY"
                     /protein_id="HAY9054028.1"
                     /translation="MTYFRINPVLALLLLLTAIAAALPFISYAPNRLVSGEGRHLWQL
                     WPQTIWMLVGVGCAWLTACFIPGKKGSICALILAQFVFVLLVWGAGKAATQLAQNGSA
                     LARTSLGSGFWLAAALALLACSDAIRRISTHPLWRWLLHMQIAIIPLWLLYSGTLNDL
                     SLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFSTARQGAIFSLLNV
                     IQTVPSVALFGLLIAPLAALVTAFPWLGKLGIAGTGMTPALIALVLYALLPLVRGVVV
                     GLNQIPRDVLESARAMGMSGAQRFLHVQLPLALPVFLRSLRVVMVQTVGMAVIAALIG
                     AGGFGALVFQGLLSSAIDLVLLGVIPVIVLAVLTDALFDLLIALLKVKRND"
     gene            complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JN001_002859"
     CDS             complement(3873..4790)
                     /gene="osmF"
                     /locus_tag="JN001_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine ABC transporter
                     substrate-binding protein OsmF"
                     /protein_id="HAY9054029.1"
                     /translation="MPLSKVWAGSLVMLAAVSLPLQAASPVKVGSKIDTEGALLGNII
                     LQVLESHGVPTVNKVQLGTTPVVRGAITSGELDIYPEYTGNGAFFFKDENDAAWKNAQ
                     QGYEKVKKLDSEHNKLIWLTPAPANNTWTIAVRQDVAEKNKLTSLADLSRYLKEGGTF
                     KLAASAEFIERADALPAFEKAYGFKLGQDQLLSLAGGDTAVTIKAAAQQISGVNAAMA
                     YGTDGPVAALGLQTLSDPQGVQPIYAPAPVVRESVLKEYPQMAQWLQPVFASLDAKTL
                     QQLNASIAVEGLDAKKVAADYLKQKGWTK"
     gene            complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JN001_002860"
     CDS             complement(5042..7339)
                     /gene="bglX"
                     /locus_tag="JN001_002860"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucosidase BglX"
                     /protein_id="HAY9054030.1"
                     /translation="MKWLCSVGIAVSLALQPALADDLFGNHPFTPEARDAFVTELLKK
                     MTVDEKIGQLRLISVGPDNPKEAIREMIKDGQVGAIFNTVTRQDIRAMQDQVMELSRL
                     KIPLFFAYDVLHGQRTVFPISLGLASSFNLDAVKTVGRVSAYEAADDGLNMTWAPMVD
                     VSRDPRWGRASEGFGEDTYLTSTMGKTMVEAMQGKSPADRYSVMTSVKHFAAYGAVEG
                     GKEYNTVDMSPQRLFNDYMPPYKAGLDAGSGAVMVALNSLNGTPATSDSWLLKDVLRD
                     QWGFKGITVSDHGAIKELIKHGTAADPEDAVRVALKSGINMSMSDEYYSKYLPGLIKS
                     GKVTMEELDDAARHVLNVKYDMGLFNDPYSHLGPKESDPVDTNAESRLHRKEAREVAR
                     ESLVLLKNRLETLPLKKSATIAVVGPLADSKRDVMGSWSAAGVADQSVTVLTGIKNAV
                     GENGKVLYAKGANVTSDKGIIDFLNQYEEAVKVDPRSPQEMIDEAVQTAKQSDMVVAV
                     VGEAQGMAHEASSRTDITIPQSQRDLIAALKATGKPLVLVLMNGRPLALVKEDQQADA
                     ILETWFAGTEGGNAIADVLFGDYNPSGKLPMSFPRSVGQIPVYYSHLNTGRPYNADKP
                     NKYTSRYFDEANGALYPFGYGLSYTTFTVSDVKLSAPTMKRDGKVTASVQVTNTGKRE
                     GATVVQMYLQDVTASMSRPVKQLKGFEKITLKPGETQTVSFPIDIEALKFWNQQMKYD
                     AEPGKFNVFIGTDSARVKKGEFELL"
     gene            7535..9250
                     /gene="dld"
                     /locus_tag="JN001_002861"
     CDS             7535..9250
                     /gene="dld"
                     /locus_tag="JN001_002861"
                     /EC_number="1.1.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-lactate dehydrogenase"
                     /protein_id="HAY9054031.1"
                     /translation="MSSMTTTDNKAFLNELARLVGHSHLLTDPAKTARYRKGFRSGQG
                     DALAVVFPSSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDIVIISTL
                     RLDKLHVLGKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGGICNNSG
                     GSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRH
                     DGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQ
                     QVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIAEKYGKDTFLMIDKLGT
                     DKMPFFFNLKGRTDAMLEKVKFFRPHFTDRAMQKFGHLFPSHLPPRMKNWRDKYEHHL
                     LLKMAGDGVGEAKSWLVDYFKQAEGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSD
                     EVEDILALDIALQRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVDVH
                     ALKEQMLELLQQRGAQYPAEHNVGHLYKAPETLQKFYRENDPTNSMNPGIGKTSKRKN
                     WQEVE"
     gene            complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JN001_002862"
     CDS             complement(9289..10221)
                     /gene="pbpG"
                     /locus_tag="JN001_002862"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311048.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine endopeptidase"
                     /protein_id="HAY9054032.1"
                     /translation="MPKFRVSLFSLALMLAVPLAPQAVAKTAAAITASQPEIASGSAM
                     IVDLNTNKVIYSNHPDLVRPIASISKLMTAMVVLDARLPLDEKLKVDISQTPEMKGVY
                     SRVRLNSEISRKDMLLLALMSSENRAAASLAHHYPGGYKAFIKAMNAKAKSLGMNNTR
                     FVEPTGLSVHNVSTARDLTKLLIASKQYPLIGQLSTTREDMATFSNPTYTLPFRNTNH
                     LVYRDNWNIQLTKTGFTNAAGHCLVMRTVINNKPVALVVMDAFGKYTHFADASRLRTW
                     IETGKVMPVPAAALSYKKQKAAQMAAAGQTAQND"
     gene            complement(10395..10982)
                     /locus_tag="JN001_002863"
     CDS             complement(10395..10982)
                     /locus_tag="JN001_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014170891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YIP1 family protein"
                     /protein_id="HAY9054033.1"
                     /translation="MSHVWGLFSHPDREMQVINRENETISHHYTHHVLLMAAIPVICA
                     FIGTTQIGWNFGDGTILKLSWFTGLALAVLFYGVMLAGVAVMGRVIWWMARNYPQRPS
                     LAHCMVFAGYVATPLFLSGLVALYPLVWLCALVGTVALFYTGYLLYLGIPSFLNINKE
                     EGLSFSSSTLAIGVLVLEVLLALTVILWGYGYRLF"
     gene            11152..11730
                     /locus_tag="JN001_002864"
     CDS             11152..11730
                     /locus_tag="JN001_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416640.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9054034.1"
                     /translation="MDLNTLISQYGYAALVIGSLAEGETVTLLGGVAAHQGLLKFPLV
                     VLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFM
                     YGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
                     KHWVWLILVVVLVVGVRWWLKRRGKKKPDHQA"
     gene            complement(11860..12621)
                     /locus_tag="JN001_002865"
     CDS             complement(11860..12621)
                     /locus_tag="JN001_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9054035.1"
                     /translation="MAQVAIITASDSGIGKECALLLAQQGFDIGITWHSDEEGAKDTA
                     REVVSHGVRAEIVQLDLGKLPEGAQALEKLIQRLGRIDVLVNNAGAMTKAPFLDMAFD
                     EWRKIFTVDVDGAFLCSQIAARQMVKQGQGGRIINITSVHEHTPLPDASAYTAAKHAL
                     GGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIA
                     SLVAWLCSEGANYTTGQSLIVDGGFMLANPQFNPE"
     gene            complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JN001_002866"
     CDS             complement(12674..>13518)
                     /gene="mdtQ"
                     /locus_tag="JN001_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311052.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="multidrug resistance outer membrane protein
                     MdtQ"
                     /protein_id="HAY9054036.1"
                     /translation="AALNTVLQQIEKEQNTIIATDRQLYQNGITSSVEGVETDINASK
                     TRQQLNDVAGKMKIIEARLSALTNNQTKSLKLKPVALPKVASQLPDELGYSLLARRAD
                     LQAAHWYVESSLSTIDAAKAAFYPDINLMAFLQQDALHLSDLFRHSAQQMGVTAGLTL
                     PIFDSGRLNANLDIAKAESNLSIASYNKAVVEAVNDVARAASQVQTLAEKNQHQAQIE
                     RDTLRVVGLAQARFNAGIIAGSRVSEARIPALRERANGLLLQGQWLDASIQLTGALGG
                     GYKR"
BASE COUNT         3238 a         3779 c         3414 g         3087 t
ORIGIN      
        1 ctggtcactt gccgcaggag ctaatcctag ttttatcgca agccagatgg gccacacaaa
       61 cgcacaaatg gtattcaatg tttacggagc atggatgaaa gacaacaatc acgaacagat
      121 agaacttctt aacagaagac tatctgaaag tgtcccatgc atgccccata agaaagcggg
      181 gtaaaataaa aacttgcaaa atcaattggt ttacctttaa tccctgtcac gttacgcgcg
      241 tggcagaggc gttacgggtt gctgaaaccg caacggacag acggcggtca tcgactgttc
      301 aacgatgccg atattgaccg gatccgcgag atcaaacgct ggatcgacaa cggcgtgcag
      361 gtcagcaaag ttaaaatgct gctcagtaat gaaaatgttg atgtgcagaa cggctggcgc
      421 gatcagcaag aaacattact gacctacctg caaagcggca atctgcatag cctgcgaacg
      481 tggatcaaag agcgcggtca ggattacccc gcccagacac tcaccacaca tctgtttatt
      541 cctctgcgcc gacggcttca gtgccaacaa ccgactctcc aggcgctgct ggcgatcctc
      601 gacggcgtac tgatcaacta catcgccatt tgtctggctt cggcacgtag aaaacagggt
      661 aaagatgcgc tggtggttgg ctggaatatt caggatacca cccgtctgtg gctggagggc
      721 tggattgcca gtcaacaagg atggcgcatt gatgtcctcg cccactcgct caatcaacta
      781 cgccctgaac tattcgaagg ccgtacattg ctggtgtggt gcggtgaaaa tcgaacctcc
      841 gcccaacagc agcaactcac cagttggcaa gaacaaggcc atgatatttt cccactcggc
      901 atttaatgat tcgttaacaa atgcgcttta ctgtacaatc ctttcgttaa cataaggagt
      961 gcaatatgcg catagctaaa attggggtca tcgccctgtt cctgtttatg gcgttaggcg
     1021 gaattggtgg cgtcatgctc gcaggttata cctttatttt gcgtgctggc taagcgcctg
     1081 caccagcctt tcaaacaggc ggtctgcaat gatcgccgcc agtgccacca gtaacgcccc
     1141 ctggatcaca tacgcggtat taaatccgct aagcccgatg atgatgggcg tacccagcgt
     1201 gctggcccct accgttgagg cgatcgtcgc cgtaccaatg ttgataatca ccgaagttcg
     1261 cacgcccgcc agaatcaccg gagccgccag cggtagctcg accttacgca gtcgctgacc
     1321 acgactcatt cccatacctt tcgcaacttc tgtcacgctg gcatcaatcg ctcccagccc
     1381 ggcaagtgtc gcctgcagga cgggcagcac accgtaaagg atcaaggcga taatcgctgg
     1441 ttgcagacca aagccgatca ccggaacggc aatcgccagc actgcgacag gcggaaaagt
     1501 ctgtccaacg gcggcaatag tttccaccag tgggcgaaat tccgcgcccc acgggcgagt
     1561 gacagcaatt ccggcaccag tgccaatgat caccacaaac aaactcgaaa ttcccaccag
     1621 ccagaaatga gccagtgcca gagctgcaaa actttcttgc tgataaacgg gtcgtggcag
     1681 ttgtgggaac aaggcagcaa acagcggctg gctgtaaggc agccagaaaa tcagtgccac
     1741 aaacaaagca atgagccaga acagcggatc gcgcaacatc ttcatacgct tacgcctcct
     1801 ccagcagatc ctgaaaatgc agcgtgccgc aaggctggcc ctgcgtgttc accaccggca
     1861 gcacctcgca tccccgcgcg acaaacaggg agagcgcatc gcgtagcgtc atctcttctg
     1921 ccagtgcctc accttctgcc cgttcttcgc gacacacgta atccgccaca ctacgtaacg
     1981 aaagcaggcg cacacccagt tcgctgcgcc caaaaaactg gcggacaaaa tcgtttgccg
     2041 gacgagtcag catcgtcagc ggattgccct gctgcaccac ttcaccgtga tccatcaata
     2101 ccagatgttc tgccagccgt agcgcctcat caatatcatg agtgaccagc acaatggtac
     2161 gccccagcaa acggtgaatg cgcgtcatct cttgttgcaa cgcgccgcgc gttaccgggt
     2221 ccagtgcgcc aaaaggttca tccatcagta agacttgcgg atcggcagcc agtgcgcgcg
     2281 ccactcccac acgttgctgc tgaccaccgg aaagctgatg cggataacgc tcacgtaaat
     2341 ttgactccag ccccagtagc gccattaatt cgtcgatacg atcgtcaatc cgcgcccgcg
     2401 accatttttg taattgcggc acggtagcga tgttttgcgc cacgctccag tgggggaaca
     2461 ggccaataga ttgaatggca tagcccatcc ggcggcgcaa ctccagtact ggcagcgagc
     2521 gaatttcttc tccggcaaag cggatcactc cgctgtcatg ctccaccagg cggttaatca
     2581 ttttcagggt ggtggatttg ccggagccag atgtgccaat cagcaccgaa aaactccctt
     2641 cctgaaaatt gagattgaga tcgttaacgg ctttttgtgc gccgaacagt ttgctgacat
     2701 ggctaaattc aatcattacg tttcaccttc agcagtgcga taagcaaatc gaacagcgcg
     2761 tcggtaagca ccgccagaac aattaccggg atcaccccca gcaacactaa atcaatggcg
     2821 ctgcttagca gcccctggaa aaccagcgca ccaaaaccgc ctgcgccgat taacgccgca
     2881 atcaccgcca tacctacagt ttgcaccatc accacccgca ggctgcgcag aaataccggt
     2941 aacgccagtg gtaactgaac atgcaggaat cgctgcgccc cgctcatgcc catcgctctg
     3001 gcactctcca gcacatcgcg cgggatctgg ttcaaaccga ctaccacgcc gcgcaccagc
     3061 ggcagcaagg catagagcac cagcgcaatc agtgcgggtg tcattccggt tcctgctatg
     3121 ccgagcttcc ccagccacgg aaaggccgtc accagcgcgg caagcggcgc aatcaacagg
     3181 ccaaagagcg ccaccgaagg cacggtctga atgacattga gcagagaaaa aattgccccc
     3241 tgccgagcag tggaaaagta gcaccagatg cccaacggca caccaatcac taacgcaggc
     3301 agcaccgcac caaacagcaa cgtcagatgt tgtgccagcg cgtcgtcaaa cacatcctga
     3361 cggttggcgt attctttcat tagtgagaga tcgttaagcg tgccggagta cagcaaccac
     3421 agcggaataa tggcaatctg catatgcaac aaccagcgcc acagcggatg cgtggagatt
     3481 cggcggatgg catcgctaca ggccagcaat gccagcgccg cagccagcca gaaaccactg
     3541 ccgaggctgg tacgcgccag cgcactgcca ttttgcgcca gttgtgtcgc cgcctttccc
     3601 gcgccccaca ccagcaatac gaagacgaat tgcgccagaa tgagtgcaca aatgctgcct
     3661 tttttaccgg gaataaaaca ggccgtcagc caggcgcaac caacgcccac cagcatccag
     3721 atcgtttgcg gccacagctg ccagagatga cgcccctcac ccgaaactaa acgattaggc
     3781 gcgtaactga taaacggcag cgccgctgcg attgccgtca gcaacagcag cagcgccaga
     3841 acaggattaa tacggaaata agtcacggga aattacttcg tccacccttt ttgtttcagg
     3901 tagtcggcag ccactttttt ggcatccagt ccttccacag caatgctggc attcagttgc
     3961 tgcaatgttt ttgcatcgag gctggcgaag actggctgta gccactgtgc catttgcgga
     4021 tactccttca acaccgactc acgcaccact ggtgcaggcg cgtagatagg ttgcacacct
     4081 tgcggatcgc ttaaggtttg cagccccagc gccgctaccg ggccgtcagt gccgtaagcc
     4141 attgcagcat taacgccaga gatttgctgg gcagcggctt tgatcgtcac cgccgtgtcg
     4201 ccaccagcca gtgacagcaa ctgatcctga ccgagcttaa agccataggc tttttcaaac
     4261 gcgggtaacg catcggcgcg ttcgataaac tctgccgagg ctgccagttt gaaggtgccg
     4321 ccctctttca gataacgact caggtcggca agcgaagtga gtttattttt ctctgccaca
     4381 tcctgacgca cggcgatagt ccaggtgtta tttgcaggcg cgggcgtcag ccagattaac
     4441 ttgttgtgct ccgaatcgag ctttttgact ttctcgtaac cttgctgcgc gtttttccac
     4501 gctgcatcgt tttcatcttt aaagaagaaa gcgccattgc cggtatattc cggatagata
     4561 tccagttcac cggaagtaat cgccccgcgc accacaggag tcgttccgag ttgcacttta
     4621 ttcaccgtcg gtacgccgtg gctttccagc acctgcaaga tgatgttgcc gagtagcgcg
     4681 ccttcggtat cgatttttga accgacttta acgggggaag ccgcctgtag cggcaggctc
     4741 acggctgcca acataaccag tgaacctgcc cagacctttg agagtggcat gatgctttcc
     4801 tcattctttt actgttgttt tcagcgaatt aagagaaaag catagttgat aatgacagag
     4861 ttagcctgag cggaaggatt cagttgcaga atcagataaa tacttaaagg gcatattttg
     4921 cccggcgttt cttgccggat gcggcgtaaa cgccttatcc ggcctacaaa ggtcgaaaat
     4981 tcagcaagtt aagatatgaa catcaggcaa agggcgcaaa cgtcgcgccc ttactaaagc
     5041 attacagcaa ctcaaactcg cctttcttaa cgcgtgcgga atcagtgccg ataaagacat
     5101 tgaacttgcc aggctcggcg tcatatttca tctgttgatt ccagaacttc agcgcctcga
     5161 tatcaatcgg gaagctgaca gtctgagttt cgcccggttt cagggtgatt ttctcaaagc
     5221 ctttcagctg cttcactgga cggctcatgg aagccgtcac atcctgcaag tacatctgta
     5281 ctaccgtggc cccttcgcgt ttaccggtgt tcgtcacctg cacgctggcc gtcactttgc
     5341 cgtcacgctt catggtcggc gcagaaagtt tcacatcaga gacggtgaaa gtggtatagc
     5401 tcagaccata gccgaacgga taaagcgccc cgttagcttc atcaaaataa cgcgaagtgt
     5461 atttgttcgg cttgtcggca ttatacggac gaccggtgtt cagatggctg tagtacaccg
     5521 ggatctgccc gacagaacgc gggaaggaca tcggcagctt gccggacggg ttgtaatcgc
     5581 caaacaacac atcggcaatt gcattaccgc cttcagtccc cgcaaaccag gtttccagaa
     5641 tcgcatcagc ctgctgatct tctttcacca gcgccagcgg acgcccgttc atcagcacca
     5701 gcaccagcgg tttaccggtg gctttcagcg ccgcaatcaa gtcacgttgg ctttgcggaa
     5761 tagtgatatc ggtacggctg gaggcctcgt gcgccatccc ctgtgcttca ccgaccacag
     5821 ccaccaccat atcagattgt ttcgccgtct gcaccgcttc atcaatcatc tcttgcggcg
     5881 agcgcggatc gactttgacc gcttcttcat actgattcag gaaatcgata atgcctttgt
     5941 cactggtaac gttcgcccct ttggcataca gcactttacc gttttcaccg acggcatttt
     6001 taatcccggt cagtacggtc acggattgat cggcaacacc ggctgcggac cagctgccca
     6061 tcacgtcgcg tttactgtcc gccagtggcc caaccaccgc aatggtggcc gattttttca
     6121 gcggtaacgt ttcgagacgg tttttcagca acaccaggct ttcgcgcgcc acttcacgtg
     6181 cttctttacg gtgcaggcgg ctttcggcat tggtatccac cgggtcagac tctttcggcc
     6241 ccaaatggct gtatgggtcg ttaaacaatc ccatatcata tttaacgttc agtacatggc
     6301 gggcagcatc gtccagctct tccatcgtca ctttgccgga tttgatcaac ccaggcagat
     6361 acttcgagta atactcgtcg ctcatactca tgttgattcc ggatttcagc gccacgcgca
     6421 ccgcatcttc cgggtctgcc gccgtgccat gtttaatcag ctctttgatt gcaccgtgat
     6481 cggaaacggt gatgccttta aagccccact ggtcgcgcag aacatctttc agcagccagg
     6541 aatcggaggt ggctggcgtg ccgttcagcg agttcagcgc caccatcacc gcgccgctgc
     6601 ctgcgtccag ccccgctttg tacggcggca tataatcatt aaacaggcgc tgcggactca
     6661 tatcgacggt gttgtactct ttaccgcctt ctaccgcgcc gtatgcggca aagtgtttga
     6721 cgctggtcat caccgagtag cgatctgccg ggcttttacc ctgcatcgct tccaccatgg
     6781 ttttacccat tgttgaggtg agatacgtat cttcgccaaa accttcggaa gcacgtcccc
     6841 agcgcggatc gcgcgagaca tcgaccatcg gtgcccaggt catattcagg ccatcatctg
     6901 ccgcttcata agcagagaca cgtccgaccg ttttcactgc atcgaggtta aaagacgagg
     6961 ccagaccgag gctaatcggg aacaccgtgc gctgaccgtg cagcacgtcg taagcaaaga
     7021 aaagaggaat tttcaggcgg cttaattcca tcacctgatc ctgcatggcg cggatatcct
     7081 gacgggttac ggtgttgaaa atcgccccaa cctgaccgtc tttgatcatc tcgcggatcg
     7141 cctctttcgg gttatccggg ccgacgctga ttaagcgcag ctgaccaatt ttctcatcaa
     7201 ctgtcatttt cttaagcaat tcggtgacga acgcatcccg cgcttcgggc gtgaatggat
     7261 ggttgccgaa taaatcatcc gccagtgctg gctgcagggc cagactcacc gcgattccta
     7321 ctgaacatag ccatttcata tggatttttc ttcctctgtt gcccgacgag gcagcgaaaa
     7381 tggtgcaaaa accgtagttt gccataagca tgatggagag agaaaaagaa tgctcagttt
     7441 attgtctgaa ttttcaaaat attcactcgc tgaattgtca tacaaggcgc tattctagtt
     7501 tgtgatattt tttcgccacc acaaggagtg gaaaatgtct tccatgacaa caactgataa
     7561 taaagccttt ttgaatgaac ttgcccgtct ggtcggtcat tcacacctgc tcaccgatcc
     7621 cgcaaaaacg gcccgctatc gcaagggctt ccgttctggt cagggcgacg cgctggctgt
     7681 cgttttccct agctcactac tggaattgtg gcgggtgctg aaagcctgtg tcaccgccga
     7741 caaaattatt ctgatgcagg ctgccaatac aggcctgacc gaaggatcga cgccaaacgg
     7801 taacgactat gatcgcgata tcgtgatcat cagcaccctg cgtctcgaca agctgcacgt
     7861 tcttggcaag ggcgaacagg tgctggccta tccgggcacc acgctctatt cgctggaaaa
     7921 agccctcaaa ccgctgggac gcgaaccgca ctcagtgatt ggatcatcgt gtataggcgc
     7981 atcggtcatc ggcggtattt gtaacaactc cggcggctca ctggtgcaac gtggcccggc
     8041 gtataccgaa atgtcgttat tcgcgcgtat aaatgaagac ggcaaactga cgctggtgaa
     8101 ccatctgggg attgatctgg gcgaaacgcc ggagcagatc cttagcaagc tggatgatga
     8161 tcgcatcaaa gatgacgatg tgcgtcacga tggtcgtcac gcccacgatt atgactatgt
     8221 ccaccgcgtt cgtgatattg aagccgacac gcccgcacgt tataacgccg atcctgatcg
     8281 gttatttgaa tcttcaggtt gcgccgggaa gctggcggtc tttgcagtac gtctagatac
     8341 cttcgaagcg gaaaaaaatc agcaggtgtt ttatatcggc accaaccagc cggaagtgct
     8401 gaccgaaatc cgccgtcata ttctggctaa cttcgaaaat ctgccggttg ccggggaata
     8461 tatgcaccgg gatatctacg atattgcgga aaaatacggc aaagacacct tcctgatgat
     8521 tgataagtta ggcaccgaca agatgccgtt cttctttaat ctcaagggac gcaccgatgc
     8581 gatgctggag aaagtgaaat tcttccgtcc gcattttact gaccgtgcga tgcaaaaatt
     8641 cggtcacctg ttccccagcc atttaccgcc gcgcatgaaa aactggcgcg ataaatacga
     8701 gcatcatctg ctgttaaaaa tggcgggcga tggcgtcggt gaagccaaat cgtggctggt
     8761 agattatttc aaacaggccg aaggcgattt ctttgtctgt acgccggagg aaggcagcaa
     8821 agcgttttta caccgtttcg ccgctgcggg cgcagcaatt cgttatcagg cggtgcattc
     8881 cgatgaagtc gaagacattc tggcgttgga tatcgctctg cagcgtaacg acaccgagtg
     8941 gtatgagcat ttaccgccgg agatcgacag ccagctggtg cacaagctct attacggcca
     9001 ttttatgtgc tatgtcttcc atcaggatta catagtgaaa aaaggcgtgg atgtgcatgc
     9061 gttgaaagaa cagatgctgg aactgctaca gcagcgtggc gcgcaatacc ctgccgagca
     9121 taacgtcggt catttgtata aagcaccgga gacgttgcag aagttttatc gcgagaacga
     9181 tccgaccaac agtatgaatc cggggatcgg taaaaccagt aagcggaaaa actggcagga
     9241 agtggagtaa aaattacgga tggcatagta tcgccatccg tcattcactt aatcgttctg
     9301 tgccgtctgc cccgccgccg ccatttgggc ggctttttgt tttttatagc tcaacgctgc
     9361 tgctggaaca ggcatcactt taccggtttc aatccaggta cgcaggcggc tggcatcggc
     9421 aaaatgggta tatttgccaa acgcatccat cactaccagc gccaccggtt tattattgat
     9481 aaccgtacgc atcaccagac aatggcccgc cgcattggta aaaccggttt tggttaactg
     9541 aatattccag ttatcgcgat acaccagatg gttagtattg cggaacggca gcgtatacgt
     9601 cgggttagag aaggttgcca tatcttcccg ggtagtactt aactgcccga tcaacggata
     9661 ttgtttgctg gcaatgagca gtttggttaa gtcacgggca gttgaaacgt tatgcaccga
     9721 caatccggta ggttcaacaa agcgcgtgtt gttcattccg agcgatttcg ctttcgcatt
     9781 cattgcctta ataaaggctt tgtaaccacc gggataatgg tgtgcaaggc ttgccgccgc
     9841 gcggttttct gaagacatca gcgccagcaa cagcatatct ttacggctga tttcgctatt
     9901 cagtcgtacg cgcgaataga cccctttcat ctccggcgtc tggctgatat ccacttttag
     9961 tttttcatcc agcggcagtc gtgcatccag cacaaccatc gcggtcatta atttgctgat
    10021 agacgcaatc ggacgcacca gatccgggtg gttcgagtag atcactttgt tggtattcag
    10081 atcaacaatc atcgcgctac cggaggcaat ttcaggttgt gaagcggtga tagcggctgc
    10141 cgttttcgca acggcctgcg gtgccaaagg cacagccagc atcagggcca ggctaaataa
    10201 agaaactcga aatttcggca tgatgagcat tcagatagtg gttcacgcgc acaggttgcg
    10261 caccgccgga gtaaggattt actgaggcta gcgacgccat cataacgagc aaaaagtgcg
    10321 atcgtcaaag gagaatcgtg aggaaatgct gcattgctga catttacgcc agcaatgcaa
    10381 cgtcaaagaa ctttctagaa caaacgataa ccgtagcccc atagtataac ggttagggcg
    10441 agcagcactt ccagtaccag cacgccaatc gccagcgtcg aactagagaa gctaaggcct
    10501 tcctctttgt tgatattcag gaagctcgga ataccaaggt aaagcaggta gccggtgtaa
    10561 aacagcgcca ccgtgccgac cagcgcacac aaccagacca gtggataaag cgccaccaaa
    10621 ccgcttaaaa acagcggagt tgcaacgtag cccgcgaaga ccatgcagtg cgcaagtgac
    10681 ggacgctgcg gataattacg cgccatccac cagatgaccc gccccattac cgcaacccca
    10741 gccagcataa cgccataaaa caggacagcc agcgccagtc cggtaaacca ggataacttc
    10801 aggatagtgc catcgccaaa attccagcca atctgtgtag tgccaatgaa ggcgcaaatc
    10861 accggaatcg ccgccatcag caaaacgtgg tgggtgtaat ggtgagaaat cgtttcgttt
    10921 tcgcgattaa tcacctgcat ttcacgatcg ggatgggaaa acagtcccca gacatggctc
    10981 ataccgcccc cttgttgtga gttcatgaac ctgacagttc aagtataagt cagcttgtga
    11041 ttattttttg ttcgctcatg taatttgcac cgtctgatgt acgtcctttt tcagcgtgaa
    11101 tgatttccag ggtgtatgct tacaggcaac caaagggaga cagactggcc tatggatctc
    11161 aatacactca tctcacaata tggttatgcc gcgctggtga tcggtagcct ggcggaaggt
    11221 gaaaccgtga ctttgctggg aggcgttgcg gcacatcagg ggctattaaa gttcccgctg
    11281 gtggtacttt ctgtggcgct tggcggcatg attggcgacc aggtgcttta tctgtgcggg
    11341 cggcggtttg gcggcaagct gttacgccgt ttctcgaaac atcaggataa aattgagcgg
    11401 gcgcagaaac ttatccaacg ccatccgtat ctgtttgtca ttggtacgcg ctttatgtat
    11461 ggctttcggg tgattggccc gacgctgatt ggtgccagcc agctgccgcc gaaaatcttt
    11521 ctgccgctga atattctcgg cgcatttgcc tgggcgttga tttttaccac tattggttac
    11581 gctggtggtc aggtgattgc gccgtggttg cacaatctcg accagcattt gaagcactgg
    11641 gtctggttga ttctggtcgt ggttctggtg gtgggcgtgc gctggtggct gaaacggcgc
    11701 gggaagaaaa agccggatca tcaggcgtaa aaccattgcc ctgggtaagg cgttcgcgcc
    11761 gcatccgaca tccggtgcac catgcctgat gcgacgcttg tgcgtcttat catgcctacc
    11821 aaaattttac ccattgaaat aaccacgcac ctcactgcgc tattctgggt tgaactgcgg
    11881 attcgccaac ataaagccgc catccactat caacgactgc ccggtggtgt aatttgcgcc
    11941 ctctgagcac agccacgcta ccaggctggc aatctcatgc gttgcgccaa aacgccgcag
    12001 aggaatcgaa ggctccgcgt cgggcttcac gtcgctgtca tccatgccat tcattggcgt
    12061 ggcgatcgcc ccaggcgcga ctgcgttcac caaaatctta tgcctgacca gctccagcgc
    12121 catcgctttg gttaacccac cgagcgcatg tttagcggct gtgtaggcgc tggcatccgg
    12181 cagcggcgta tgttcatgta ccgatgtaat gttgatgatg cgaccgccct gcccttgttt
    12241 caccatctgg cgggccgcaa tttgtgagca taaaaatgca ccatcgacat caacggtaaa
    12301 aatcttgcgc cactcatcga aagccatatc aagaaacggc gctttggtca ttgcgcccgc
    12361 attattcacc agcacatcaa tacgccccag ccgttgaatg agtttctcca gcgcctgcgc
    12421 accttctggc agtttaccga gatccagctg cacgatctcc gcacgtacgc cgtggctaac
    12481 tacctcacgc gcggtatctt ttgccccttc ttcatctgag tgccaggtaa tgccaatatc
    12541 aaacccttgc tgcgccagta ataacgcgca ctctttgccg atccccgaat cggaggcggt
    12601 aataatcgca acctgtgcca tcgagttctc cacttaacgc tgaataaacg ttaagtatag
    12661 aaggcgcata tcatcagcgt ttgtaacccc cgcccaacgc accagtgagt tgaatggagg
    12721 catccagcca ctgcccttgc aataacaggc cattggcccg ctcacgcagc gcggggattc
    12781 tggcttcgct gacgcgggaa ccagcaatga tgcccgcgtt aaagcgcgcc tgcgcaagac
    12841 ctaccacacg caaggtatcg cgctcaattt gcgcctgatg ctggtttttc tccgcaagtg
    12901 tctgaacctg actggctgcc cgcgccacgt cattcaccgc ttcaaccacc gctttgttgt
    12961 agctggcgat agacaagttg ctttcggctt ttgcgatatc gagattggcg ttaagacgac
    13021 cactatcgaa aatgggtagc gtcaggcctg ccgtaacgcc catttgctgc gcggaatgac
    13081 ggaacagatc gcttaagtgc aacgcatcct gttgcaggaa ggccatcagg ttgatgtcag
    13141 gataaaatgc cgcttttgcc gcatcaatgg tgcttagcga tgactcaacg taccagtgcg
    13201 ccgcctgcaa atctgcccgc cgggccagta aggagtaccc cagttcatca ggaagctggc
    13261 ttgccacttt cggcaacgcg accggtttaa gcttcaatga ctttgtctgg ttatttgtaa
    13321 gtgcgcttaa ccgtgcctca ataattttca ttttccccgc gacatcgttg agctgctgcc
    13381 gggttttgct ggcattaata tcggtttcca caccttcaac tgaagaagta atcccgttct
    13441 gatatagctg gcgatcggtc gcgataatgg tgttctgctc tttttctatt tgctgcaaga
    13501 ccgtgtttaa cgccgcct
//
LOCUS       DADMJE010000111        13479 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.112, whole genome shotgun sequence.
ACCESSION   DADMJE010000111 DADMJE010000000
VERSION     DADMJE010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13479
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.112"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(102..3323)
                     /gene="carB"
                     /locus_tag="JN001_002867"
     CDS             complement(102..3323)
                     /gene="carB"
                     /locus_tag="JN001_002867"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HAY9054037.1"
                     /translation="MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRV
                     ILVNSNPATIMTDPEMADATYIEPIHWEVVRKIIEKERPDAVLPTMGGQTALNCALEL
                     ERQGVLEEFGVTMIGATADAIDKAEDRRRFDVAMKKIGLETARSGIAHTMEEALAVAA
                     DVGFPCIIRPSFTMGGSGGGIAYNREEFEEICARGLDLSPTKELLIDESLIGWKEYEM
                     EVVRDKNDNCIIVCSIENFDAMGIHTGDSITVAPAQTLTDKEYQIMRNASMAVLREIG
                     VETGGSNVQFAVNPKNGRLIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     LMNDITGGRTPASFEPSIDYVVTKIPRFNFEKFAGANDRLTTQMKSVGEVMAIGRTQQ
                     ESLQKALRGLEVGATGFDPKVSLDDPEALTKIRRELKDAGAERIWYIADAFRAGLSVD
                     GVFNLTNIDRWFLVQIEELVRLEEKVAEVGITGLNAEFLRQLKRKGFADARLAKLAGV
                     REAEIRKLRDQYDLHPVYKRVDTCAAEFATDTAYMYSTYEEECEANPSTDREKIMVLG
                     GGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSDRLYFEPVTLE
                     DVLEIVRIEKPKGVIVQYGGQTPLKLARALEAAGVPVIGTSPDAIDRAEDRERFQHAV
                     ERLKLKQPANATVTAIEMAVEKAKEIGYPLVVRPSYVLGGRAMEIVYDEADLRRYFQT
                     AVSVSNDAPVLLDHFLDDAVEVDVDAICDGEMVLIGGIMEHIEQAGVHSGDSACSLPA
                     YTLSQEIQDVMRQQVQKLAFELQVRGLMNVQFAVKNNEVYLIEVNPRAARTVPFVSKA
                     TGVPLAKVAARVMAGKSLAEQGVTKEVIPPYYSVKEVVLPFNKFPGVDPLLGPEMRST
                     GEVMGVGRTFAEAFAKAQLGSNSTMKKHGRALLSVREGDKERVVDLAAKLLKQGFELD
                     ATHGTAIVLGEAGINPRLVNKVHEGRPHIQDRIKNGEYTYIINTTSGRRAIEDSRVIR
                     RSALQYKVHYDTTLNGGFATAMALNADATEKVISVQEMHAQIK"
     gene            complement(3341..4489)
                     /locus_tag="JN001_002868"
     CDS             complement(3341..4489)
                     /locus_tag="JN001_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase small subunit"
                     /protein_id="HAY9054038.1"
                     /translation="MIKSALLVLEDGTQFHGRAIGATGSAVGEVVFNTSMTGYQEILT
                     DPSYSRQIVTLTYPHIGNVGTNDADEESSQVHAQGLVIRDLPLIASNFRNTEDLSSYL
                     KRHNIVAIADIDTRKLTRLLREKGAQNGCIIAGDNPDAALALEKARAFPGLNGMDLAK
                     EVTTAEAYSWTQGSWTLTGGLPEAKKEDELPFHVVAYDFGAKRNILRMLVDRGCRLTI
                     VPAQTSAEDVLKMNPDGIFLSNGPGDPAPCDYAITAIQKFLETDIPVFGICLGHQLLA
                     LASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFAVDEATLPANLRVTHKSLFD
                     GTLQGIHRTDKPAFSFQGHPEASPGPHDAAPLFDHFIELIEQYRKTAK"
     gene            complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JN001_002869"
     CDS             complement(4944..5765)
                     /gene="dapB"
                     /locus_tag="JN001_002869"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HAY9054039.1"
                     /translation="MHDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSL
                     LGSDAGELAGAGKTGVTVQSSLDAVKDDFDVFIDFTRPEGTLNHLAFCRQHGKGMVIG
                     TTGFDEAGKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEIIEAHH
                     RHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSRESHTGERVPGTIGFATVRAGDIVG
                     EHTAMFADIGERLEITHKASSRMTFANGAVRSALWLSGKESGLFDMRDVLDLNSL"
     gene            complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JN001_002870"
     CDS             complement(5932..6846)
                     /gene="rihC"
                     /locus_tag="JN001_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside hydrolase RihC"
                     /protein_id="HAY9054040.1"
                     /translation="MHLPIFLDTDPGIDDAVAIAAAIFAPELDLQLMTTVAGNVSVEK
                     TTRNALQLLHFWNAEIPLAQGAAVPLVRAPRDAASVHGESGMAGYDFVEHNRKPLGIP
                     AFLAIRDALMRAPEPVTLVAIGPLTNIALLLSQCPECKPYIRRLVIMGGSAGRGNCTP
                     NAEFNIAADPEAAACVFRSGIEIVMSGLDVTNQAILTPDYLATLPELNRTGKMLHALF
                     SHYRSGSMQSGLRMHDLCAIAWLVRPELFTLKPCFVAVETQGEFTSGTTVVDIDGCLG
                     KPANVKVALDLDVKGFQQWVAEVLALAS"
     gene            complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JN001_002871"
                     /gene_synonym="lytB"
     CDS             complement(6912..7862)
                     /gene="ispH"
                     /locus_tag="JN001_002871"
                     /gene_synonym="lytB"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HAY9054041.1"
                     /translation="MQILLANPRGFCAGVDRAISIVENALAIYGAPIYVRHEVVHNRY
                     VVDSLRERGAIFIEQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKV
                     HMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEK
                     LSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVL
                     VVGSKNSSNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQ
                     NVVARLQQLGGGEAIPLEGREENIVFEVPKELRVDIREVD"
     gene            complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JN001_002872"
     CDS             complement(7864..8313)
                     /gene="fkpB"
                     /locus_tag="JN001_002872"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FKBP-type peptidyl-prolyl cis-trans isomerase"
                     /protein_id="HAY9054042.1"
                     /translation="MSESVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASL
                     SEGLEQHLLGLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFT
                     AMDGSEMPGVIREINGDSITVDFNHPLAGQTVHFDIEVLEIDPALEA"
     gene            complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JN001_002873"
     CDS             complement(8382..8876)
                     /gene="lspA"
                     /locus_tag="JN001_002873"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein signal peptidase"
                     /protein_id="HAY9054043.1"
                     /translation="MSQSICSTGLRWLWLVVVVLIIDLGSKYLILQNFALGDTVPLFP
                     SLNLHYARNYGAAFSFLADSGGWQRWFFAGIAIGISVILAVMMYRLKATQKLNNIAYA
                     LIIGGALGNLFDRLWHGFVVDMIDFYVGDWHFATFNLADTAICVGAALIVLEGFLPSR
                     AKKQ"
     gene            complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JN001_002874"
     CDS             complement(8876..11692)
                     /gene="ileS"
                     /locus_tag="JN001_002874"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005124083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HAY9054044.1"
                     /translation="MSDYKSTLNLPETGFPMRGDLAKREPGMLARWTDDDLYGIIRAA
                     KKGKKTFILHDGPPYANGSIHIGHSVNKILKDIIVKSKGLSGYDSPYVPGWDCHGLPI
                     ELKVEQEYGKPGEKFTAAEFRAKCREYAATQVDGQRKDFIRLGVLGDWSHPYLTMDFK
                     TEANIIRALGKIIGNGHLHKGAKPVHWCVDCRSALAEAEVEYYDKTSPSIDVAFQAVD
                     QDALKAKFAVSNVNGPISLVIWTTTPWTLPANRAISIAPDFDYALVQIDGQAVILAKD
                     LVESVMQRIGVTDYTILGTVKGAELELLRFTHPFMGFDVPAILGDHVTLDAGTGAVHT
                     APGHGPDDYVIGQKYGLETANPVGPDGTYLPGTYPTLDGVNVFKANDIVVALLQEKGA
                     LLHVEKMQHSYPCCWRHKTPIIFRATPQWFVSMDQKGLRAQSLKEIKGVQWIPDWGQA
                     RIESMVANRPDWCISRQRTWGVPMSLFVHKDTEELHPRTLELMEEVAKRVEVDGIQAW
                     WDLDAKEILGDEADQYVKVPDTLDVWFDSGSTHFSVVDVRPEFAGHAADMYLEGSDQH
                     RGWFMSSLMISTAMKGKAPYRQVLTHGFTVDGQGRKMSKSIGNTVSPQDVMNKLGADI
                     LRLWVASTDYTGEMAVSDEILKRAADSYRRIRNTARFLLANLNGFDPAKDMVKPEEMV
                     VLDRWAVGCAKAAQEDILKAYEAYDFHEVVQRLMRFCSVEMGSFYLDIIKDRQYTAKA
                     DSVARRSCQTALYHIAEALVRWMAPILSFTADEVWGYLPGEREKYVFTGEWYEGLFGL
                     ADSEAMNDAFWDELLKVRGEVNKVIEQARADKKVGGSLEAAVTLYAEPELAAKLTALG
                     DELRFVLLTSGATVADYHDAPADAQQSEVLKGLKVALSKAEGEKCPRCWHYTQDVGKV
                     AEHAEICGRCVSNVAGDGEKRKFA"
     gene            complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JN001_002875"
     CDS             complement(11735..12676)
                     /gene="ribF"
                     /locus_tag="JN001_002875"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HAY9054045.1"
                     /translation="MKLIRGIHNLSQAPQEGCVLTIGNFDGVHRGHRALLQGLQEEGR
                     KRNLPVMVMLFEPQPLELFATDKAPARLTRLREKLRYLAECGVDYVLCVRFDRRFAAL
                     TAQNFISDLLVKHLRVKFLAVGDDFRFGAGREGDFLLLQKAGMEYGFDITSTQTFCEG
                     GVRISSTAVRQALADDNLALAESLLGHPFAISGRVVHGDELGRTIGFPTANVPLRRQV
                     SPVKGVYVVEVLGLGEKPLPGVANIGTRPTVAGIRQQLEVHLLDVAMDLYGRHIQVVL
                     RKKIRNEQRFASLDELKAQIARDELTAREFFGLTKPA"
     gene            complement(12684..12902)
                     /locus_tag="JN001_002876"
     CDS             complement(12684..12902)
                     /locus_tag="JN001_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2575 domain-containing protein"
                     /protein_id="HAY9054046.1"
                     /translation="MCRHSLRSDGAGFYQLAGCEYSFSAIKIAAGGHFLPVICAMAMK
                     SHFFLISVLNRRLTLTAVQGILGRFSLF"
     gene            13005..13268
                     /gene="rpsT"
                     /locus_tag="JN001_002877"
     CDS             13005..13268
                     /gene="rpsT"
                     /locus_tag="JN001_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006117633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HAY9054047.1"
                     /translation="MANIKSAKKRAIQSEKARKHNASRRSMMRTFIKKVYAAIEAGDK
                     AAAQKAFNEMQPIVDRQAAKGLIHKNKAARHKANLTAQINKLA"
BASE COUNT         3149 a         3805 c         3399 g         3126 t
ORIGIN      
        1 aaaagattta cttaatgggc aaaaaaaacg gtcctcatca gagaaccgta ttacttattc
       61 gatcaaatta gcggatgaaa aatatccgcc atgacacgct attatttgat ctgcgcgtgc
      121 atttcctgca ccgaaattac tttttcggtc gcgtcggcat tcagcgccat cgcggtagcg
      181 aaaccaccgt tcagggtggt gtcataatgc actttatatt gcagcgcact gcgacggatc
      241 acgcgggagt cttcaatcgc gcgacggcct gaagtggtgt tgatgatgta ggtatattcg
      301 ccattcttga tgcggtcctg aatgtgcgga cggccttcat gcaccttgtt caccagacgc
      361 ggattaatgc ccgcttcgcc cagcacaatc gccgtgccgt gggtcgcatc cagctcgaag
      421 ccctgtttca gcagttttgc cgccaggtcc accacgcgtt ctttatcgcc ttcgcgcacg
      481 gaaagcaacg cacgaccgtg tttcttcatg gtggagttgc tgcccagctg cgctttggca
      541 aacgcttcag cgaaggtgcg gcccacgccc atcacttccc cggtggagcg catttctggc
      601 cctaacagcg ggtcaacacc cgggaattta ttgaacggca gcaccacttc tttcaccgag
      661 tagtacggcg ggataacttc tttggttacg ccctgctcag ccagcgattt gccagccatc
      721 acacgcgccg ccacttttgc cagcggtacg ccggtggctt tggagacgaa cggaacggta
      781 cgcgccgcac gcgggttaac ttcaatcagg tagacttcgt tgtttttcac cgcaaactgc
      841 acgttcatca gaccgcgcac ctgcaattcg aaggccagtt tctgcacctg ctggcgcatc
      901 acatcctgaa tttcctgact taaggtgtag gctggcagag aacatgcgga gtcaccggag
      961 tgcacgcccg cctgctcgat gtgctccatg atgccgccaa tcagcaccat ttcgccgtcg
     1021 cagatggcat ccacgtcaac ttctaccgcg tcatcaagga agtgatccag caacactggc
     1081 gcatcgttag acacgctgac cgccgtctgg aagtagcgac gcaggtcagc ttcgtcatag
     1141 acgatttcca tcgcccgacc gccgagaacg taagacggac gtaccaccag cgggtagcca
     1201 atctctttcg ccttctctac cgccatttca atagcggtaa cggtggcgtt cgccggttgt
     1261 ttcagtttca gacgctcaac cgcatgctgg aagcgttcac ggtcttctgc acggtcgata
     1321 gcatccgggc tggtgccgat aaccggtacg ccagcagctt ccagcgcgcg cgccagtttc
     1381 agcggggtct gaccgccgta ctgaacgata acgcctttcg gcttctcaat acgcacgatt
     1441 tccagcacat cttccagagt taccggctcg aagtagaggc gatcggaagt gtcgtagtcg
     1501 gtggagacgg tttccgggtt acagttaacc ataatggttt cgtaaccgtc ttcgcgcagc
     1561 gccagcgagg cgtgtacaca gcagtagtcg aattcgatac cctgaccgat acggttcggg
     1621 ccgccgccga gaaccatgat tttttcacgg tcggtagacg gattcgcttc gcactcttct
     1681 tcataagtgg agtacatgta agcggtgtcg gtggcgaact ctgccgcaca ggtatccacg
     1741 cgcttataaa ccgggtgcag gtcatactgg tcgcgcagct tgcggatttc cgcttcgcgc
     1801 acgcccgcca gttttgccag acgcgcatcg gcaaagcctt tgcgtttcag ctggcgcagg
     1861 aattcagcgt tcaggccagt gatgcccact tccgctactt tctcttccag acgcaccagt
     1921 tcttcaatct gtaccaggaa ccagcggtca atattggtca ggttgaacac gccgtccaca
     1981 gacaggcccg cacggaaggc atcggcgatg taccagatac gctctgcgcc agcatctttc
     2041 agttcgcgac ggattttggt taacgcttcc gggtcatcga ggctcacttt cgggtcgaat
     2101 ccagtcgcac cgacttccag gccgcgcagc gctttttgca gggattcctg ctgcgtgcga
     2161 ccaatcgcca tcacttcgcc aaccgatttc atctgagtgg tcagacggtc gttagcacca
     2221 gcgaattttt cgaagttgaa gcgaggaatt ttagtaacca catagtcgat ggacggctcg
     2281 aaggaggccg gagtacgtcc gccagtgatg tcgttcatca gttcgtcgag ggtgtaaccc
     2341 accgccagtt tcgccgccac tttagcaatc gggaaaccgg tcgctttcga cgccagcgcc
     2401 gaagaacggg acacgcgtgg gttcatttcg ataacaatca ggcgaccgtt tttcgggttc
     2461 accgcaaact ggacattgga accaccggtt tcaacgccga tttcacgcag caccgccatc
     2521 gaggcgttac gcatgatttg atattctttg tcggtcagcg tttgggctgg cgcgacagtg
     2581 atggagtcac cggtatggat gcccatcgca tcaaagtttt cgatagagca gacgatgatg
     2641 cagttgtcgt ttttatcacg caccacttcc atctcgtact ctttccagcc gatcagcgac
     2701 tcatcaatca gcagctcttt ggttggggag agatccagac cgcgggcgca aatttcttca
     2761 aactcttcgc ggttataagc gataccgccg ccgctaccgc ccatggtaaa ggatgggcga
     2821 ataatgcacg ggaagcccac gtcagcggca accgccagcg cttcttccat cgtgtgtgcg
     2881 ataccggaac gcgcggtttc cagaccaatt ttcttcatcg ctacgtcgaa acgacggcgg
     2941 tcttctgctt tatcaatcgc atcggcggtc gcaccaatca tagtcacgcc gaactcttcc
     3001 aacacgccct gacgctccag ctccagagcg cagttcagcg ccgtctgacc gcccatcgtt
     3061 ggcagcaccg cgtccgggcg ctctttttca ataatcttgc gtactacttc ccagtgaatc
     3121 ggctcgatgt aggtcgcatc ggccatttcc gggtcggtca tgatggtcgc cgggttggag
     3181 ttcaccagaa tgacgcggta accctcttcg cgcagggctt tacatgcttg cgcgccagag
     3241 tagtcaaact cacacgcctg accgataaca atcgggcccg cacccagaat caggatactt
     3301 tttatatctg tacgttttgg catggctctt ttactcctga ttacttagcg gttttacggt
     3361 actgctcaat taactcgata aagtggtcga acaacggcgc tgcgtcgtgt ggcccagggc
     3421 tggcttccgg gtgaccctgg aagctgaacg ccggtttatc agtgcgatga atgccctgta
     3481 acgtaccgtc gaacagggat ttatgcgtga cacgcaggtt tgcaggtaat gttgcttcat
     3541 ccaccgcaaa accgtggttc tgggcggtga tcatcaccac gtttttctcc acatctttaa
     3601 ccggatggtt gccgccgtgg tgaccaaatt tcattttgac agtcttcgca ccgctcgcca
     3661 gcgccagcag ctgatgaccg aggcagatgc cgaataccgg aatatcggtt tcgaggaatt
     3721 tctggatggc ggtaatggcg taatcgcacg gggccgggtc gccaggaccg ttggagagga
     3781 agatgccgtc tggattcatt ttcagcacat cttccgcaga agtttgcgcc ggaacgatgg
     3841 tcaggcgaca gcctctatcc accagcatcc gcaggatgtt gcgcttggca ccaaaatcat
     3901 aagccacgac gtggaacggc agctcgtctt cttttttcgc ttctggcagg ccgccggtca
     3961 acgtccagct cccttgtgtc cagctatagg cttctgcggt ggtcacttct tttgccagat
     4021 ccatgccatt cagacctggg aacgcgcggg ctttttctaa cgccaacgcc gcatccgggt
     4081 tatcgcctgc gataatgcag ccattctgtg cgcctttctc gcgcagtaaa cgcgtcagct
     4141 tacgggtatc gatatcggca atcgccacga tgttatggcg cttcaggtaa gaagagaggt
     4201 cttcggtatt acggaagttg ctggcaatca gcggcaggtc gcgaatcacc agaccttgtg
     4261 catgtacctg agaagattct tcatcggcgt cattagtgcc gacattgcca atatggggat
     4321 aagtaagagt aacgatttga cgagaatagg aaggatcagt gaggatttct tgataaccgg
     4381 tcattgaagt attgaaaacg acttccccaa ccgccgaacc tgttgcccct atggcccgac
     4441 cgtgaaactg ggttccgtct tccagaacca atagcgctga cttaatcaaa acaccctcca
     4501 gagaatattc actcacttta tttgcatatt aattcacaat gatgacgtaa atcaatgcaa
     4561 atctgcttac cgacgaattt ctggcaaacg gcggcattct ggagatatgg gcgctaaaag
     4621 tcaacttaat ggcgggattt tttatattat tttgtggctc atgcatgttt tacaggcatt
     4681 aagcgacaaa aagatcatat aacctgttct ggaaaacgct tgcacagcaa gaagattgca
     4741 tgaaataaaa gggagcaggg aaaagtggac caaatggtca aattttacat taaaacaaca
     4801 aaaacagaag acaaaacatg taatttttgg cacttataga caatttaaaa acataacact
     4861 aaaaataaaa gggccaaaat taaagccctt tataatcaat aaattaaatg tgttattttt
     4921 gcaccataac aaatattttg tggttacaaa ctattgagat caagcacatc tcgcatatca
     4981 aaaagaccac tttccttacc actcaaccac aaagccgatc ttaccgcgcc gttagcaaat
     5041 gtcatgcggc tggacgcctt atgggtgatc tccagacgct cgccaatatc ggcaaacatc
     5101 gcggtatgtt cgccaacgat gtcacctgca cgcacggtgg caaaaccaat ggtgccaggc
     5161 acacgttcac cggtgtggct ttcacgactg tagaccgcgc aatctttcag atctttatca
     5221 agggcgtggg cgatcgcctc tcccattgcc agtgcggtgc ctgacggcgc atcaacttta
     5281 tgtctatgat gtgcttcaat aatttcgata tcggtgtagt cacccatcac tttggctgct
     5341 ttctccagca gcttaagcat gacgttaacg ccaacgctaa aattggcggc aaagacaatc
     5401 gcaatatcgg cggcagcgtc acgaatcgcc tgtttaccgg cttcgtcaaa ccccgtagtg
     5461 ccgatcacca tccctttgcc atgctggcga caaaaagcga gatggttcag cgtaccttcc
     5521 ggacgggtaa aatcgataaa cacatcaaaa tcatctttta ccgcatcgag gctgctttgc
     5581 acggtaacgc ctgttttccc tgcaccagcc agctcaccgg cgtcgctgcc cagtaaagaa
     5641 gatccttcgc gctccagcgc cgcgcccagc tgcacgcctt ctaatgccag cgccgcctga
     5701 atcaactggc ggcccatacg ccccccggct cccgcgatgg caacgcggat gtttgcatca
     5761 tgcatagcta ttctcttttg ttaatttgca tagaccgttt tcagagtaac cagcgcatcg
     5821 ctacgccgcc agccaaaaac gctgataatt agaaattaat gataaacagg gagggatatc
     5881 agtgaaaggc atgagtcgat gaatgactgc atgccgataa catgtgacag gttacgacgc
     5941 cagagccagc acctcagcca cccactgctg gaagcctttc acatccagat ccaatgccac
     6001 ctttacattg gctggtttgc ccaggcaacc gtcgatatca accaccgtcg tgcctgaggt
     6061 aaattcgccc tgagtttcca ctgccacaaa acacggtttg agagtgaaca attccgggcg
     6121 caccagccag gcaatagcgc aaagatcgtg catacgcagt ccactttgca tactgccgct
     6181 acggtagtgg ctaaacaggg cgtggagcat ttttccggtg cgattcaact ccggcaaagt
     6241 agcgagatag tcaggggtta atattgcctg attggtgaca tccagaccgc tcatgacgat
     6301 ttcgatgccg ctacggaaga cacaggcagc cgcttctgga tcggcagcga tattaaactc
     6361 ggcgtttggt gtgcagttgc cgcgaccagc agaaccgccc atgatcacca gacgacgaat
     6421 atacggttta cattccgggc attgtgaaag taacagcgca atattggtta acgggccgat
     6481 ggccaccagg gtaacgggct ctggtgcacg catcagggca tcccgaatcg ccagaaacgc
     6541 tggtatcccg agcggctttc ggttgtgctc aacaaagtcg tagccagcca ttcccgattc
     6601 gccgtgcaca gatgccgcat cacgcggtgc gcgtaccagc ggcacagcgg ctccctgggc
     6661 gagcggaatc tccgcattcc agaaatgcag cagttgcagg gcgttgcggg tggttttctc
     6721 aaccgagaca ttacccgcga cggtggtcat cagttgcagg tcgagttcgg gtgcaaaaat
     6781 cgcggcggca atggcgacgg catcgtcaat gccggggtca gtatcgagga agataggtaa
     6841 atgcatgttt tctccataaa aaatgccggt aacaagaccg gcattttcgc ataacttagg
     6901 ctgctaatga cttaatcgac ttcacgaata tcgacacgca gctctttcgg cacttcgaaa
     6961 acaatgtttt cttcacggcc ttccagcgga atggcttcac caccgcccag ctgctgcaaa
     7021 cgtgccacca cattctgcac cagaatatcc ggagccgatg cgcccgcagt cacgccgacg
     7081 catttaacct ctttcaccca ctcttcctgg atgtctttcg catcgtcaat caaaaacgcg
     7141 cgtttgccca tacgctgggc cagctccgcc agacggttgg agttggagga gtttttcgaa
     7201 ccgaccacca acacaacttc cgcctgttct gccagggcgc gtaccgcttc ctgacggtta
     7261 gtcgtggcgt agcagatgtc atctttgcgc ggaccgacaa ttttcgggaa gcgtttacgc
     7321 agcgcgtcga tcacatcaga cgtgtcatcc accgacagcg tggtctgggt cataaaggag
     7381 agcttctctt cgtttttgac cgtcagtttc cacacatcgt ccggcgattc gaccagatac
     7441 attccccctt ccgggttact gtactggccc attgtccctt ccacttccgg gtgcccggcg
     7501 tgaccgatga gaatagattc ttcgccacgg cgactggcgc gggcgacttc catatgcact
     7561 ttggtcacca gcggacaggt cgcgtcaaat accgtcaaat cgcgactttt tgcttcgtta
     7621 cgtaccgcct gagaaacacc gtgtgcggag aaaatcagga tcgcgccgtc cggtacttcg
     7681 ctaatctgct caataaagat agccccacgc tcacgcaagc tatcgaccac atagcggtta
     7741 tgtaccactt cgtgacggac atatatcggt gcgccgtaaa tggccagcgc gttttcaaca
     7801 atgctgatag cgcggtctac cccggcacaa aaaccacgcg ggttggccaa caggatctgc
     7861 atgttacgcc tccaatgccg gatcgatttc cagcacttca atatcaaaat gaacggtctg
     7921 cccggccaga ggatggttga aatcaacggt aatggagtcg ccgttaattt cgcggatcac
     7981 gccaggcatc tcactgccat ccattgcggt aaaaagcatg attgcgccaa tttctggctc
     8041 gcctgcatcc ataaattcac ggcgggagaa gtactgaatc aggtccggtg acggcacgcc
     8101 aaacgccgca tctggctcca acgagaaggt ggttttatcg cccactttca gccccaacag
     8161 gtgttgctcc agcccttcag aaagagaagc atcacccagg cggaacagcg ccggtttacc
     8221 gttgttgcgg gtagactcgg cggtggtgcc atcgtcgagt tttagcgtga agtgcaccag
     8281 gacggcgcta ttgctctgta cagattcaga catgcaggtt tgctcttata tttgaggatt
     8341 tttgccggat gcggcgtaaa cgccttatcc ggcagggttt attattgttt tttcgctcta
     8401 gaaggcaaaa aaccttccag cacaatcagt gccgcaccga cacagatggc agtatcggca
     8461 aggttgaagg tggcgaagtg ccagtcgccg acgtagaagt cgatcatatc gacaacgaag
     8521 ccgtgccaca ggcggtcgaa caggttgccc agcgcgccgc caataatcag cgcgtaagcg
     8581 atattgttta gcttctgcgt ggccttcaag cgatacatca tcactgccag gatcacgcta
     8641 ataccaatcg caataccggc aaagaaccaa cgctgccagc cgccgctatc ggcaaggaaa
     8701 ctaaacgccg cgccatagtt acgcgcataa tgcagattaa gcgacgggaa cagcgggacc
     8761 gtatccccca gagcaaagtt ctggaggatc aggtatttgc tgcccagatc gataatcagc
     8821 acgactacca ccagccacag ccagcgtagc cctgttgaac agatcgattg actcatcagg
     8881 caaacttacg tttttcaccg tcaccggcga cgttgctgac acagcggccg cagatttctg
     8941 cgtgttccgc caccttgccg acatcctggg tgtagtgcca gcagcgtggg cacttctcac
     9001 cttcggcttt actcaacgcg actttcagcc ctttgagtac ttcgctctgc tgagcatcag
     9061 caggtgcgtc gtgatagtct gcaacggtag cgccggaggt caacaggaca aatcgtaatt
     9121 catcgcccag cgcggtcagt ttcgccgcca gttccggttc tgcatacaag gttactgccg
     9181 cttccagcga gccacccact ttcttgtcgg cacgcgcttg ctcaatgact ttgttcactt
     9241 cgccacgcac tttcaacagc tcgtcccaga acgcatcgtt catcgcttcg ctgtctgcca
     9301 ggccaaacag gccttcgtac cactcaccgg tgaagacgta tttttcacgt tcgcccggca
     9361 ggtagcccca cacttcatca gcggtgaagg agaggattgg tgccatccag cgcaccagcg
     9421 cttctgcgat gtgatacagc gcagtctggc agctacgacg cgccacactg tccgctttgg
     9481 cggtgtactg acggtctttg atgatgtcga ggtagaagga acccatctca acggagcaga
     9541 agcgcatcag acgctgtacc acttcgtgga aatcgtatgc ttcgtacgcc ttgaggatgt
     9601 cttcctgtgc cgctttcgca caacctacgg cccagcgatc cagtaccacc atctcttccg
     9661 gtttcaccat atcttttgct ggatcaaaac cgttcaggtt tgccagcagg aagcgcgcgg
     9721 tgttacggat acgacgatag ctatcggcag cacgtttcag gatctcgtca gaaacggcca
     9781 tttcaccggt gtagtcggtt gatgccaccc acagacgcag aatatccgcg cccagtttgt
     9841 tcatcacatc ctgcggcgaa acggtattgc cgatggattt agacatcttg cggccctgac
     9901 catccacggt aaagccgtgg gtcagtacct gacgatacgg cgctttgcct ttcatcgcgg
     9961 tggagatcat tagggaagac atgaaccaac cacggtgctg gtcagaacct tccagataca
    10021 tgtccgctgc gtgaccggca aattccggac gcacgtcaac aacagaaaag tgggtagatc
    10081 cggagtcaaa ccatacatcc aatgtgtccg gcactttcac gtactgatca gcttcatcgc
    10141 cgaggatctc tttcgcatca agatcccacc acgcctggat gccgtcaact tcaacgcgtt
    10201 ttgccacttc ttccattagt tcgagagtac gcggatgcag ctcttccgtg tctttgtgca
    10261 cgaacagtga catcggtacg ccccaggtgc gctgacggga gatacaccag tcaggacggt
    10321 tagcaaccat cgactcgata cgcgcctggc cccagtccgg gatccactgc acgcctttga
    10381 tctctttcag tgactgcgca cgcagacctt tctgatccat gctgacgaac cactgcggcg
    10441 tcgcgcggaa gatgatcggc gttttgtgac gccagcagca cggatagctg tgctgcattt
    10501 tctcaacgtg cagcagcgcg cctttttcct gcagcagcgc aacgacgatg tcgttcgctt
    10561 tgaagacgtt cacgccatcc agcgtcggat aagtgcccgg cagataagtg ccgtccgggc
    10621 caaccgggtt agcggtttcc aggccgtatt tctgaccgat cacatagtcg tccgggccgt
    10681 ggccaggcgc ggtgtgaacg gcaccggtac cggcatccag ggtaacgtga tcgccgagga
    10741 ttgccggaac gtcgaagccc ataaacggat gggtaaagcg cagcaactca agctccgcac
    10801 cttttaccgt gccgagaatg gtgtaatcgg tcacgccgat acgctgcatt acgctttcaa
    10861 ccagatcttt cgccagaatc acggcctgac cgtcgatctg caccagcgca tagtcgaaat
    10921 caggtgcaat agagattgcg cggttcgcag gcagagtcca cggcgtagtg gtccagatca
    10981 ccagcgagat tgggccgtta acgttgctta cggcaaattt tgctttcagt gcatcctgat
    11041 cgaccgcctg aaaagcaacg tcgatggacg gagaagtttt gtcgtaatac tcaacttccg
    11101 cttccgccag cgcagaacgg cagtcaacgc accagtgtac cggcttcgcg cctttgtgca
    11161 ggtgaccgtt gccgatgatt ttgcccagcg cgcggatgat gttggcttca gttttgaagt
    11221 ccatggtcag gtacgggtgc gaccagtcgc ccagcacgcc cagacggata aagtctttgc
    11281 gttgaccgtc aacctgggtc gccgcgtatt cgcggcactt ggcgcggaac tcggcggcgg
    11341 tgaatttctc acccggctta ccgtattctt gctctacttt cagctcgatc ggcagaccgt
    11401 ggcagtccca gccaggcaca tacggcgagt cataaccgga aagccctttg gacttcacga
    11461 taatgtcttt cagaatcttg ttaaccgagt gaccaatatg aatgctgcca ttcgcataag
    11521 gagggccatc atgcagaatg aaggtttttt tgcctttttt agccgcacgg atgatgccgt
    11581 acagatcatc atcagtccaa cgcgccagca ttcccggttc gcgcttggcg agatcgccac
    11641 gcatcgggaa ccctgtttcc ggcaaattca gggttgattt atagtcactc atcagattct
    11701 cggttccgtg tttcggtttg attacataac aggcttaagc cggttttgtt agcccaaaaa
    11761 attcgcgggc ggttaattca tcacgcgcaa tctgcgcttt cagttcgtcc agcgacgcaa
    11821 atcgctgctc attgcgtatt tttttacgca gcactacttg tatatggcga ccgtaaaggt
    11881 ccattgcaac atctaacaaa tgcacttcca gctgctggcg aataccggca accgttgggc
    11941 gtgttccgat gtttgccacg ccgggtaacg gcttttcacc gaggcccagc acttctacca
    12001 cataaacccc tttcaccggg gaaacctgac ggcgtagcgg tacattcgcc gtcgggaaac
    12061 ctatagtgcg ccctaattca tcaccgtgga ctacacgccc ggagatggca aacgggtgcc
    12121 ccagtaaact ttctgccaga gccagattgt catccgccag cgcctgacgc acagcggtgc
    12181 tgctaatacg cacgccacct tcgcaaaaag tttgcgtact agtgatatcg aagccgtatt
    12241 ccatgccagc tttctgtaat aacaagaaat cgccttcacg accagcgcca aagcggaaat
    12301 catcccctac ggcaagaaat tttacgcgca aatgcttcac cagaagatcg ctgatgaaat
    12361 tttgcgcggt taacgccgcg aaacgcctgt cgaaacgcac gcacagcacg taatcaacgc
    12421 cacactctgc aaggtaacgc agtttttccc gcagccgggt cagtcttgcc ggggctttat
    12481 cggtagcaaa cagttccagt ggttgaggtt caaaaagcat caccatcacc ggtaagttgc
    12541 gcttgcgccc ttcttcctgc aagccctgta acagcgcgcg atgaccgcga tgcacgccgt
    12601 cgaaattacc aatagtcagc acacaccctt cttgcggggc ctggctgaga ttatgtatgc
    12661 cgcgtatcag cttcatgtct ggctcaaaac agtgaaaatc gtccgagtat accttgtaca
    12721 gcggtcaagg ttaaccggcg attgagtacc gaaatcagaa agaagtggct tttcattgcc
    12781 atggcgcaaa tcacgggaag aaagtgaccg cctgctgcaa tttttatcgc ggaaaagctg
    12841 tattcacacc ccgcaagctg gtagaatcct gcgccatcac tacgtaacga gtgccggcac
    12901 attaacggcg cttatttgca caaatccatt gacaaaagaa ggctaaaagg gcatattcct
    12961 cggcctttga attgtccata tagaacacat ttgggagttg gaccttggct aatatcaaat
    13021 cagctaagaa gcgcgccatt cagtctgaaa aggctcgtaa gcacaacgca agccgtcgct
    13081 ctatgatgcg tactttcatc aagaaagtat acgcagctat cgaagctggc gacaaagctg
    13141 ctgcacagaa agcatttaac gaaatgcaac cgatcgtgga ccgtcaggct gctaaaggtc
    13201 tgatccacaa aaacaaagct gcacgtcata aggctaacct gactgcacag atcaacaaac
    13261 tggcttaatc gccaatttgc tgaagctttg tgaaaaagcc cgcgcaagcg ggttttttta
    13321 tgcctgctgc ttttatgatg cgtgagagaa cacactaccg gttgccagat agtcaaaaga
    13381 tgctggcttt tgcagacacg ccgttacact ttctgaactc ttcgtggctt aagaatcgta
    13441 gaaccatcgg ctgatacatt ctgaacaaga atatctact
//
LOCUS       DADMJE010000112        13367 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.113, whole genome shotgun sequence.
ACCESSION   DADMJE010000112 DADMJE010000000
VERSION     DADMJE010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13367)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13367)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13367
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.113"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(171..1094)
                     /locus_tag="JN001_002878"
     CDS             complement(171..1094)
                     /locus_tag="JN001_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310535.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054048.1"
                     /translation="MNNLPLLNDLRVFMLVARRAGFAAVAEELGVSPAFVSKRIALLE
                     QTLNVVLLHRTTRRVTITEEGERIYEWAQRILQDVGQMMDELSDVRQVPQGMLRIISS
                     FGFGRQVVAPALSALAKAYPQLELRFDVEDRLVDLVNEGVDLDIRIGDDIAPNLIARK
                     LATNYRILCASPEFIAQHGAPKHLTDLSALPCLVIKERDHPFGVWQLRNKEGHHAIKV
                     TGPLSSNHGEIVHQWCLDGQGIALRSWWDVSENIASGHLVQVLPEYYQPANVWAVYVS
                     RLATSAKVRITVEFLRQYFAEHYPNFSLEHA"
     gene            1197..2282
                     /gene="dmlA"
                     /locus_tag="JN001_002879"
     CDS             1197..2282
                     /gene="dmlA"
                     /locus_tag="JN001_002879"
                     /EC_number="1.1.1.83"
                     /EC_number="1.1.1.85"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multifunctional
                     D-malate/3-isopropylmalate/tartarate dehydrogenase"
                     /protein_id="HAY9054049.1"
                     /translation="MMKTMRIAAIPGDGIGKEVLPEGIRVLQAAAERWGFDLSFEQMG
                     WASCEYYSHHGKMMPDDWHEQLSRFDAIYFGAVGWPDTVPDHISLWGSLLKFRREFDQ
                     YINLRPVRLFPGVPCPLAGKQPGDIDFYVVRENTEGEYSSLGGRVNEGTEHEVVIQES
                     VFTRRGVDRILRYAFELAQSRPRKTLTYATKSNGLAISMPYWDERVEAMAENYPEIRW
                     DKQHIDILCARFVMQPERFDVVVASNLFGDILSDLGPACTGTIGIAPSANLNPERTFP
                     SLFEPVHGSAPDIYGKNIANPIATIWAGAMMLDFLGNGDERFQQAHNGILAAIEEVIA
                     HGPKTPDMKGNATTPQVADAICKIILR"
     gene            2532..4142
                     /gene="yeaV"
                     /locus_tag="JN001_002880"
     CDS             2532..4142
                     /gene="yeaV"
                     /locus_tag="JN001_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter YeaV"
                     /protein_id="HAY9054050.1"
                     /translation="MMSNVKKKDVPLISISLVAILFIAAALSLFPQQSADAANAIYTF
                     VTRTLGSAVQVLVLLAMGLVIYLATSKYGNIRLGEGKPEYSTLSWLFMFICAGLGSST
                     LYWGVAEWAYYYQTPGLNIAPRSQQALEFSVPYSFFHWGISAWATYTLASLIMAYHFH
                     VRKNKGLSLSGIIAAITGVRPQGPWGKLVDLMFLIATVGALTISLVVTAATFTRGLSA
                     LTGLPDNFTVQAFVILLSGGIFCLSSWIGINNGLQRLSKMVGWGAFLLPLLVLIVGPT
                     EFITNSIINAIGLTTQNFLQMSLFTDPLGDGSFTRNWTVFYWLWWISYTPGVAMFVTR
                     VSRGRKIKEVIWGLILGSTVGCWFFFGVMESYAIHQFINGVINVPQVLETLGGETAVQ
                     QVLMSLPAGKLFLAAYLGVMIIFLASHMDAVAYTMAATSTRNLQEGDDPDRGLRLFWC
                     VVITLIPLSILFTGASLETMKTTVVLTALPFLVILLVKVGGFIRWLKQDYADIPAHQV
                     EHYLPQTPVEALEKTPVIPAGTVFKGDN"
     gene            4174..5298
                     /gene="yeaW"
                     /locus_tag="JN001_002881"
     CDS             4174..5298
                     /gene="yeaW"
                     /locus_tag="JN001_002881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaW"
                     /protein_id="HAY9054051.1"
                     /translation="MSNLSPDFVLPENFCANPQEAWTIPARFYTDQNAFEHEKENVFA
                     KSWICVAHSSELANANDYVTREIIGESIVLVRGRDKVLRAFYNVCPHRGHQLLSGEGK
                     AKNMITCPYHAWAFKLDGNLAHARNCENVANFDSDKAQLVPVRLEEYAGFVFINMDPN
                     ATSVEDQLPGLGAKVLEACPEVHDLKLAARFTTRTSANWKNIVDNYLECYHCGPAHPG
                     FSDSVQVDRYWHTMHGNWTLQYGFAKPSEQSFKFEEGTDAAFHGFWLWPCTMLNVTPI
                     KGMMTVIYEFPVDSETTLQNYDIYFTNEELTDEQKSLIEWYRDVFRPEDLRLVESVQK
                     GLKSRGYRGQGRIMADSSGSGISEHGIAHFHNLLAQVFKD"
     gene            5354..6319
                     /gene="yeaX"
                     /locus_tag="JN001_002882"
     CDS             5354..6319
                     /gene="yeaX"
                     /locus_tag="JN001_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carnitine monooxygenase subunit YeaX"
                     /protein_id="HAY9054052.1"
                     /translation="MSDYQMFEVQVSQVEPLTEQVKRFTLVATDGKPLPAFTGGSHVI
                     VQMSDGDNQYSNAYSLLSSPHDTSCYQIAVRLEENSRGGSRFLHQQVKVGNRLTISTP
                     NNLFALIPSARKHLFIAGGIGITPFLSHMAELQHSDVDWQLHYCSRNPESCAFRDELV
                     QHPQAEKVHLHHSSTGTRLELARLLADIEPGTHVYTCGPEALNEAVRSEAARLDIAAD
                     TLHFEQFAIEDKTGDAFTLVLARSGKEFVVPEEMTILQVIENNKAAKVECLCREGVCG
                     TCETAILEGEADHRDQYFSDEERASQQSMLICCSRAKGKRLVLDL"
     gene            complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JN001_002883"
     CDS             complement(6373..7488)
                     /gene="rnd"
                     /locus_tag="JN001_002883"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310540.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HAY9054053.1"
                     /translation="MITTDDALASLCEAVRAFPAIALDTEFVRTRTYYPQLGLIQLFD
                     GEHLALIDPLGITDWSPLKAILRDPSITKFLHAGSEDLEVFLNVFGELPQPLIDTQIL
                     SAFCGRPMSWGFASMVEEYSGVTLDKSESRTDWLARPLTERQCEYAAADVWYLLPITA
                     KLMVETEASGWLPAALDECRLMQMRRQEVVAPEDAWRDITNAWQLRTRQLACLQLLAD
                     WRLRKARERDLAVNFVVREEHLWSVARYMPGSLGELDSLGLSGSEIRFHGKTLLTLVE
                     KAQTLPEEALPQPMLNLMDMPGYRKAFKAIKSLITDVSETHKISAELLASRRQINQLL
                     NWHWKLKPQNNLPELISGWRGELMAEALHNLLQEYPQ"
     gene            complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JN001_002884"
     CDS             complement(7569..9254)
                     /gene="fadD"
                     /locus_tag="JN001_002884"
                     /EC_number="6.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain-fatty-acid--CoA ligase FadD"
                     /protein_id="HAY9054054.1"
                     /translation="MKKVWLNRYPADVPTEINPDRYQSLVDMFEQSVARYADQPAFVN
                     MGEVMTFRKLEERSRAFAAYLQQGVGLKKGDRVALMMPNLLQYPVALFGILRAGMIVV
                     NVNPLYTPRELEHQLNDSGASAVVIVSNFAHTLEKVVDKTAVQHVILTRMGDQLSTAK
                     GTVVNFVVKYIKRLVPKYHLPDAISFRSALHNGYRMQYVKPELVPEDLAFLQYTGGTT
                     GVAKGAMLTHRNMLANLEQVNATYGPLLHPGKELVVTALPLYHIFALTINCLLFIELG
                     GQNLLITNPRDIPGLVKELAKYPFTAITGVNTLFNALLNNKEFQQLDFSSLHLSAGGG
                     MPVQQVVAERWVKLTGQYLLEGYGLTECAPLVSVNPYDIDYHSGSIGLPVPSTEAKLV
                     DDDDNEVPPGQPGELCVKGPQVMLGYWQRPDATDEIIKNGWLHTGDIAVMDEEGFLRI
                     VDRKKDMILVSGFNVYPNEIEDVVMQHPGVQEVAAVGVPSGSSGEAVKIFVVKKDPSL
                     TEESLVTFCRRQLTGYKVPKLVEFRDELPKSNVGKILRRELRDEARGKVDNKA"
     gene            complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JN001_002885"
     CDS             complement(9459..10040)
                     /gene="yeaY"
                     /locus_tag="JN001_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Slp family lipoprotein YeaY"
                     /protein_id="HAY9054055.1"
                     /translation="MAVQKNVIKGILAGTFALMLSGCVTVPDAIKGRSPTPQQDLVRV
                     MSAPQLYVGQEARFGGKVVAVQNQQGKTRLEIATVPLDSGARPTLGEPSRGRIYADVN
                     GFLDPVDFRGQLVTVVGPITGAVDGKIGNTPYKFMVMQVTGYKRWHLTQQVIMPPQPI
                     DPWFYGGRGWPYGYGGWGWYNPGPARVQTVVTE"
     gene            complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JN001_002886"
     CDS             complement(10080..10775)
                     /gene="tsaB"
                     /locus_tag="JN001_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HAY9054056.1"
                     /translation="MRILAIDTATEACSVALWNDGTVNAHFELCPREHTQRILPMVQD
                     ILTTSGTSLTDINALAYGRGPGSFTGVRIGIGIAQGLALGAELPMIGVSTLMTMAQGA
                     WRKNGATRVLAAIDARMGEVYWAEYQRDENGIWRGEETEAVLKPELVHERMQQLSGEW
                     VTVGTGWQAWPDLGKESGLVLRDGEVLLPATEDMLPIACQIFAEGKTVAVEHAEPVYL
                     RNNVAWKKLPGKE"
     gene            complement(10833..12743)
                     /locus_tag="JN001_002887"
     CDS             complement(10833..12743)
                     /locus_tag="JN001_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HAY9054057.1"
                     /translation="MTDDFAPDGQLAKAIPGFKPREPQRQMAVAVTQAIEKGQPLVVE
                     AGTGTGKTYAYLAPALRAKKKVIISTGSKALQDQLYSRDLPTVSKALKYTGNVALLKG
                     RSNYLCLERLEQQALAGGDLPVQILSDVILLRSWSNQTVDGDISTCVSVAEDSQAWPL
                     VTSTNDNCLGSDCPMYKDCFVVKARKKAMDADVVVVNHHLFLADMVVKESGFGELIPE
                     ADVMIFDEAHQLPDIASQYFGQSLSSRQLLDLAKDITIAYRTELKDTQQLQKCADRLA
                     QSAQDFRLQLGEPGYRGNLRELLANPQIQRAFLLLDDTLELCYDVAKLSLGRSALLDA
                     AFERATLYRTRLKRLKEINQPGYSYWYECTSRHFTLALTPLSVADKFKELMAQKPGSW
                     IFTSATLSVNDDLHHFTSRLGIEQAESLLLPSPFDYSRQALLCVPRNLPQTNQPGSAR
                     QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSKGQLLQQFV
                     SAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLLKARMEDCRLRGGDPFD
                     EVQLPDAVITLKQGVGRLIRDADDRGVLVICDNRLVMRPYGATFLASLPPAPRTRDIA
                     RAVRFLAIPSSR"
     gene            12875..13219
                     /locus_tag="JN001_002888"
     CDS             12875..13219
                     /locus_tag="JN001_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416323.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HAY9054058.1"
                     /translation="MTIVRIDAEARWSDVVIHNNTLYYTGVPENLDADAFEQTANTLA
                     QIDAVLEKQGSNKSSILDATIFLADKNDFAAMNKAWDAWVVAGHAPVRCTVQAGLMNP
                     KYKVEIKIVAAV"
BASE COUNT         3199 a         3555 c         3334 g         3279 t
ORIGIN      
        1 accagatagg tccagtaatt cagaaccccg tattcagcga acacattaac ctctttaatt
       61 atctttcgat catgcgcgat taaaggtgaa tatgctaacc aatctgtagc ggcttagaaa
      121 ggagaaaatc aggttttaac ccgatatcaa cccgataatt gaatcattaa tcaggcatgc
      181 tccagtgaaa aattcgggta gtgctcggca aaatactggc gtaaaaattc taccgttatc
      241 cgcactttcg ctgacgtcgc cagccttgaa acataaacgg cccagacgtt cgctggctgg
      301 taatattccg gtagcacttg cactaaatga ccactggcaa tgttttcgct aacatcccac
      361 caggaacgca gagcaatccc ctgcccatcg agacaccact gatggacaat ttctccatga
      421 ttagacgaca gtgggccggt gactttaatc gcatggtggc cttctttatt gcgtaattgc
      481 cagacaccaa aaggatgatc gcgctcttta atgaccaggc acggcaatgc agaaagatcg
      541 gttaaatgtt tcggcgcgcc atgttgcgca ataaattccg gcgacgcgca gagaatgcgg
      601 taattggtcg ccagtttgcg ggcgattaaa ttaggggcga tgtcatcgcc aatgcgaata
      661 tcgagatcga caccttcatt gaccaaatcg accagccggt cttccacatc aaaacgtaat
      721 tccagttgcg gatacgcctt cgccagcgct gataacgccg gagccaccac ctgtcgtcca
      781 aaaccaaagc tgctgataat acgcagcatc ccctgtggca cctgacgcac gtcagaaagt
      841 tcgtccatca tctgaccgac atcctgcaaa atccgctgcg cccattcata aatccgctct
      901 ccttcttcgg taatggtgac gcggcgggtg gtgcggtgta acaacaccac gtttagcgtt
      961 tgctccagca aggcgatgcg cttgctgacg aacgccggtg aaacgcccag ttcttccgcc
     1021 acggcggcaa aaccagcccg acgagccacc agcataaaga cgcgcaaatc attcagcagc
     1081 ggtaaattat tcatgattcg tgttttatgt ttcaccagtt acggggatta attccttttc
     1141 cgtcaattat aggatggtga tgttgtcaat tttgatggtc aggaagtgag aacccaatga
     1201 tgaaaacgat gcgtattgct gcgatcccgg gagacgggat tggtaaagaa gtccttcctg
     1261 aagggattcg cgtgttacag gctgccgctg agcgctgggg cttcgacttg agttttgagc
     1321 aaatggggtg ggcgagctgc gagtattaca gccatcacgg taaaatgatg ccggacgact
     1381 ggcatgagca acttagccgt ttcgacgcca tctattttgg tgccgtcggc tggccggata
     1441 ccgttccgga ccatatttcg ttgtggggtt cgctgctgaa atttcgtcgt gaattcgacc
     1501 agtacatcaa cctgcgcccg gttcgtctct ttcctggcgt tccctgcccg ctggcgggaa
     1561 aacagcctgg cgacatcgat ttttacgtgg tcagggaaaa caccgaaggc gaatattcct
     1621 cgctcggcgg tagagtgaat gaaggtacag agcatgaagt cgtcattcag gaatcggtat
     1681 ttacacgtcg tggtgtcgat cgcattttgc gttatgcctt cgaacttgcg caaagccgcc
     1741 cacgtaagac gctaacttat gccactaaat cgaacggttt agccatcagc atgccgtact
     1801 gggatgagcg agtggaagca atggccgaga attacccgga gatccgctgg gacaagcagc
     1861 atattgatat tctctgcgcg cgttttgtga tgcagccgga acgcttcgat gtggtggtgg
     1921 cgtccaattt gtttggcgat atcctttccg atcttggccc ggcctgcacc ggcaccattg
     1981 gcattgcccc atccgccaac ctgaatccgg aacgcacttt cccgtcgctc ttcgagcctg
     2041 tccacggttc cgcgccggat atctacggga aaaatattgc taaccctatc gccacgattt
     2101 gggccggggc aatgatgctc gattttctcg gcaatggcga tgagcgtttc cagcaagcgc
     2161 ataacggtat tctggcagca attgaagaag tgattgctca cgggccgaaa acacctgata
     2221 tgaaaggcaa tgccaccacg ccacaggttg ccgacgcgat ttgcaaaatt attttgcgtt
     2281 aaggtcaaac cagtttattt gaaccgcgtc actgacgcgg ttttttattc gttctttgca
     2341 gtaaataacc tgcgtcattt caccttttat tgtttccgtt tcgtgtttta tggctttccg
     2401 cattcttaat tgtttaattt atgtaatatt caaataatca atttgttaaa cacaacatac
     2461 aactcattac cctgcaaata attacaactg gcaaaagcca gagacgggct tttatgccca
     2521 ggagatgact catgatgagc aatgttaaga aaaaagatgt gccgctgata agcatcagcc
     2581 tggtggccat tcttttcatc gcagctgcat taagcctttt cccacaacaa tcggccgacg
     2641 cggccaacgc aatatacact tttgttacgc gtacgttagg ttccgccgta caggtattgg
     2701 ttttgctggc aatgggactg gtgatttatt tagccaccag taaatacggc aatattcgtc
     2761 ttggcgaagg aaaaccggaa tacagcacgc tctcctggct gtttatgttt atttgtgccg
     2821 gtttaggttc ttctacgctt tattgggggg ttgctgaatg ggcctattat tatcaaacac
     2881 ctggattaaa tatcgcaccg cgttcacaac aggcactcga atttagcgtt ccctactctt
     2941 tcttccactg gggcatcagc gcctgggcaa cttatacgct ggcctcatta atcatggctt
     3001 atcactttca tgtgcggaaa aacaaaggtc tgagcctttc cggcattatt gctgctatta
     3061 ccggcgttcg cccgcaaggc ccatggggaa aactggttga tttgatgttc ctgatcgcca
     3121 ctgtcggcgc actgactatt tcccttgttg tcaccgcagc aacctttact cgtggacttt
     3181 ccgcactgac aggtttaccc gacaacttca ccgtgcaggc atttgtgatc ctgctttctg
     3241 gcggcatttt ttgcctaagc tcgtggattg gtatcaacaa cggtttgcaa cgtctgagca
     3301 aaatggttgg ctggggcgcg ttcctgctgc cattactggt gctgattgtc ggcccaaccg
     3361 aatttattac caacagcatc atcaatgcca tcggcctgac cacgcaaaac ttcctgcaaa
     3421 tgagcttatt caccgatccg cttggcgatg gttcatttac ccgcaactgg accgttttct
     3481 actggctgtg gtggatctca tacacccctg gcgtagcaat gtttgtcacc cgcgtttccc
     3541 gcggtcgtaa gattaaagaa gttatctggg gactgatcct cggcagcacc gtcggttgct
     3601 ggttcttctt cggcgtaatg gaaagctatg ccattcatca gtttatcaat ggcgtaatca
     3661 acgtcccaca ggtgctggaa acactgggcg gcgaaacagc tgtacagcaa gttctgatgt
     3721 cgttgccagc cggtaaattg ttcctcgccg catacctggg cgtgatgatt attttccttg
     3781 cctcgcatat ggatgcagtg gcctacacca tggcggcgac cagtacgcgt aatctccagg
     3841 aaggtgacga tcctgaccgt gggctgcgtc ttttctggtg cgtggtgatc actctgatcc
     3901 cgctttccat cttgtttacc ggtgcttcgc tggaaacgat gaaaaccacc gtcgtgctca
     3961 cagcccttcc cttcctcgtc attttactgg tgaaagtcgg cggatttatt cgctggctga
     4021 aacaggatta cgccgacatt ccggctcatc aagttgaaca ttatctcccg cagacaccgg
     4081 ttgaagccct ggaaaaaaca ccagtgatcc ctgcgggaac cgtattcaaa ggcgacaact
     4141 gagcgccatc atcctaacga taaaggtatc cctatgagca atctgagccc tgactttgta
     4201 ctacccgaaa atttttgcgc taacccgcaa gaggcgtgga ccattcctgc ccgtttttat
     4261 accgatcaga acgcgtttga acacgaaaaa gagaacgtct tcgccaaaag ctggatttgc
     4321 gtcgctcaca gcagcgaact ggcgaatgcc aatgattatg tgacgcgtga gatcattggc
     4381 gaaagcatcg tgctggtacg cggtcgtgat aaggttttgc gcgcgttcta taacgtgtgt
     4441 ccgcaccgtg gtcatcagtt gttgagcggt gaaggaaaag caaaaaatat gattacctgc
     4501 ccgtatcacg catgggcatt caaactcgat ggcaatctgg cccatgcacg taactgcgaa
     4561 aacgtcgcca atttcgatag cgacaaagcg caactggttc cggtgcgtct ggaagaatat
     4621 gccggattcg tcttcatcaa catggacccc aacgccacca gcgtagaaga tcagttaccc
     4681 ggtctgggcg cgaaagtgct ggaagcctgc ccggaagtcc acgatctgaa actggcggcc
     4741 cgctttacca cccgcacgtc tgccaactgg aagaacattg tcgataacta tctcgagtgc
     4801 tatcactgtg gtccggcgca tccaggtttc tccgactccg tacaggttga tcgttactgg
     4861 cacaccatgc acggtaactg gacgctgcaa tacggtttcg ccaaaccgtc cgaacagtcg
     4921 tttaaatttg aagagggtac ggatgcggca ttccacggtt tctggctgtg gccgtgcacg
     4981 atgctgaacg tcaccccgat caaagggatg atgacggtca tttatgaatt cccggtggat
     5041 tctgaaacta ccctgcaaaa ctacgatatt tacttcacca atgaagagtt aaccgacgag
     5101 caaaaatcgc tgattgagtg gtatcgcgat gtgttccgtc cggaagattt acgtctggtt
     5161 gaaagcgtac agaaagggct gaaatcgcgt ggctatcgtg gtcaggggcg catcatggcc
     5221 gacagtagcg gtagtggcat ttccgaacat ggtatcgccc atttccataa tctgctggcg
     5281 caggtgttta aggactaatg acatcggcgg cggtattttc cgctgctggg ctgatttttg
     5341 atggagtaca gcaatgtcag actatcaaat gtttgaagta caggtgagcc aggttgaacc
     5401 ccttaccgaa caggtgaaac gcttcacgct ggtggcaacc gatggcaaac cgctgcctgc
     5461 gttcaccgga ggaagtcacg tcattgtgca gatgagcgat ggtgataacc agtacagcaa
     5521 tgcgtattca ctactgagtt cgccgcatga cacctcttgt tatcagattg ccgttcggct
     5581 ggaggaaaac tcgcgcggcg gttcccgctt tttgcatcag caggtaaaag tgggcaatcg
     5641 gttaacgatt tcaacgccta ataacctgtt tgcgctaatt ccctcagcca gaaagcatct
     5701 gtttatcgcg ggcggtattg gtatcacccc tttcctgtcg cacatggcag agctgcaaca
     5761 cagcgacgtc gactggcagc tacattactg ctcgcgaaat ccagaaagtt gcgcatttcg
     5821 tgatgagcta gtccagcatc cgcaggctga gaaagttcac ttgcatcact catcaaccgg
     5881 aacacgactg gaattagcgc gattattggc ggatatcgaa cctggcacac acgtttatac
     5941 ctgtggtccc gaggcgctaa atgaagcggt aagaagtgaa gctgcgcgtc tggacatcgc
     6001 cgccgatacg ctgcactttg agcaatttgc tatcgaagac aaaaccggcg atgcctttac
     6061 cctggtgctt gcccgttccg gaaaagagtt tgtggtgccg gaagagatga ctattttgca
     6121 ggttattgaa aataataaag ccgcgaaagt ggaatgttta tgtcgtgaag gggtatgcgg
     6181 aacctgcgaa acagcaatac tggaaggtga agctgaccat cgggatcagt attttagcga
     6241 tgaagagcgt gccagccagc aaagtatgtt gatctgttgt tcgcgtgcga agggtaaacg
     6301 cctggtgttg gatttgtagt ttgccaaagc cggatgtggc gctgagcgcg cccagtccgg
     6361 cttcggaaga ttttactgcg gatattcctg caataaattg tgtaatgctt ccgccatcag
     6421 ctcaccacgc cagccggaaa tcagctccgg caaattgttc tgcggtttca gtttccagtg
     6481 ccagttcagc agttggttga tttgccgacg cgatgccagc aattcggcgc tgatcttatg
     6541 cgtttcgctc acgtcagtaa tcagcgactt aatcgcttta aacgctttac gataaccagg
     6601 catgtccatc aggttaagca tcggctgcgg taaggcctct tccggcaatg tctgcgcttt
     6661 ttccaccagc gtcagcagcg ttttaccgtg aaagcggatt tcgctaccgg ataaacccag
     6721 gctgtccagt tcgcctaaac ttcccggcat ataacgcgcg accgaccaca aatgctcttc
     6781 acgcacgaca aagttcaccg ccagatcacg ctctcgcgcc ttgcgcagtc gccagtcggc
     6841 taacagttgc agacaggcca gttggcgtgt gcgtaactgc caggcattgg tgatatcacg
     6901 ccaggcatct tccggcgcaa cgacttcctg acgacgcatt tgcatcaggc ggcattcatc
     6961 cagcgccgca ggtagccagc cggaggcctc cgtttctacc ataagcttgg cggtgatcgg
     7021 taacagatac cagacatccg ccgctgcgta ttcacactga cgttcggtca gcggtctggc
     7081 cagccagtcg gtgcgcgatt cactcttgtc cagcgtaacg ccggaatact cttccaccat
     7141 ggaagcgaaa ccccatgaca tcgggcgtcc gcagaaggca gaaaggattt gcgtgtcaat
     7201 caagggttgt ggtaattcgc caaagacatt gaggaacact tccagatctt cactgcctgc
     7261 atggagaaat tttgtgatgg acggatcgcg caggatcgct ttcagcggtg accagtcggt
     7321 gatcccgaga ggatcaatta gcgccagatg ctcgccatcg aaaagttgaa tcaaccccag
     7381 ctgcgggtaa taagtgcgcg tacgaacaaa ttcagtatcc agggctatcg ccggaaaggc
     7441 acggacggct tcacacaaag aagccagcgc atcgtccgtg gtaatcattt ggtaattcaa
     7501 attgttttct ctttagtggg cgtcaaaaaa acgccggatt aaccggcgtc tgacgactga
     7561 cttaacgctc aggctttatt gtccactttg ccgcgcgctt cgtcacgtaa ttctcgtcgc
     7621 aaaatttttc cgacgttaga tttcggtaac tcatcacgaa actccaccag cttcggtact
     7681 ttgtatcccg tgagctgacg gcggcaaaaa gtcaccagtg actcttcggt aagcgatgga
     7741 tcttttttca ctacgaagat tttcaccgct tcaccactgg agccggaagg tacgccaaca
     7801 gccgcgactt cctgtacgcc aggatgctgc atgacgacat cttcaatctc gttgggatag
     7861 acgttaaaac cggaaaccag aatcatgtct tttttacgat cgacaatgcg caggaatcct
     7921 tcttcatcca ttaccgcgat gtcgccggtg tgtaaccagc catttttgat gatttcatcg
     7981 gtagcatcgg gacgctgcca gtaacccagc atcacctgcg gtcctttgac acaaagctca
     8041 cccggttgac ctggtggtac ttcattatca tcatcatcca ccagtttggc ttccgtcgac
     8101 ggcaccggca aaccgatgct accactatga taatcaatat catatgggtt aacgctgacc
     8161 agcggcgcac actcggtaag gccatagcct tccagcagat actgtccggt cagtttcacc
     8221 caacgctctg ccaccacttg ctgcactggc atcccaccgc ctgcggaaag atgcagactg
     8281 gagaaatcca gctgctggaa ctctttattg ttcagcaacg cattgaacaa ggtgttaacg
     8341 ccagtgatag cggtaaacgg atatttcgct aactctttta ccaaccctgg aatatcacgc
     8401 gggttagtga taagcaggtt ctgcccaccc agttcgataa acagcaggca gttaatggtc
     8461 agggcaaaaa tgtgatacag cggcagtgcc gttactacca gttctttacc tggatgcagc
     8521 aacggcccat aggtggcgtt gacctgttcc aggttcgcca gcatattgcg gtgagtcagc
     8581 atcgcgcctt tcgccacacc tgtggtgccg ccggtgtatt gcaggaaggc taaatcttcc
     8641 ggcaccagtt cgggtttgac gtactgcatc cggtagccgt tatgcagtgc gctacgaaat
     8701 gaaatggcat ctggcagatg gtatttcggc accaaacgct tgatgtattt aacaacgaaa
     8761 ttgactaccg tgccttttgc cgtagatagc tgatcgccca tacgggtcag aattacgtgc
     8821 tgaacggcgg ttttatcaac cactttttcc agtgtgtgag caaagttaga cacgataaca
     8881 accgccgatg cgccgctatc gttaagctga tgctcaagct cacgcggggt atacaacggg
     8941 ttaacgttta cgacgatcat cccggcacgc aaaatgccaa acagcgccac cggatattgc
     9001 aataaattag gcatcatcaa cgcaacgcga tcgcctttct tcagccccac cccttgttgc
     9061 aaataagcgg caaacgcgcg actgcgttct tccagcttgc ggaaggtcat cacctccccc
     9121 atattcacaa acgcaggctg atcggcgtag cgcgcgaccg actgctcaaa catatctacc
     9181 agagattgat aacggtcagg gttgatctcc gtcggaacgt ccgcgggata acggttaagc
     9241 caaaccttct tcaattcttc acctctaaaa tgcgtgttcg tcgtcatcgc aaccccaaat
     9301 gatatacatg ccgttaacat aatattaact catcatacca gcttgataat tacccaacga
     9361 aaaggttgcg aagcgcgtca ctatttattt ttatctttac cgtaagaatg cagaaacagc
     9421 ggaccagccg ctgtttcttt ttctttaaaa acaagcaatt attcagttac aactgtttgt
     9481 actctcgcgg gaccgggatt ataccagccc catccgccgt agccataggg ccagccacga
     9541 ccgccataaa accatggatc aatcggctga ggcggcataa tcacctgctg ggttaaatgc
     9601 caacgtttgt aacccgttac ttgcatcacc ataaatttat agggcgtatt gccgattttg
     9661 ccgtcaaccg caccagtgat tggcccgact accgtaacca gttgtccacg gaaatccacc
     9721 gggtccagaa aaccgttcac atcggcataa atgcgaccgc gagaaggttc tcccagcgtc
     9781 ggtctggctc cgctgtccag cggtacggta gcaatttcca ggcgggtttt cccttgctgg
     9841 ttttgtaccg caaccacttt gccaccaaag cgtgcctcct gaccaacgta cagctgcggc
     9901 gcactcatca cccgaactaa atcttgttgc ggcgtgggac tgcggccttt aatggcgtcc
     9961 ggcacagtga cacaaccgct cagcattagc gcaaacgtac ctgccagtat gcctttgata
    10021 acattctttt gaaccgccat gatgcgactc ctttttttct cagagcatac tcttaagatt
    10081 cattctttgc ccggaagttt cttccatgcg acgttgttac gtaaataaac cggttcggca
    10141 tgttccaccg ccaccgtttt accctcggca aatatctgac acgcaatcgg cagcatatct
    10201 tccgtcgctg gcagtaaaac ttctccgtcg cgcaaaacca gcccgctctc tttaccgaga
    10261 tccggccagg cttgccagcc cgtccctacc gttacccatt cgccggaaag ctgttgcatt
    10321 cgttcatgaa cgagttcggg tttgagtacg gcttcggttt cttcaccgcg ccagataccg
    10381 ttttcatcac gctgatattc ggcccagtaa acttcgccca tccgcgcatc aatggcagcc
    10441 agcacgcggg ttgcgccgtt tttgcgccac gccccttgcg ccattgtcat tagcgtggag
    10501 acgccaatca tcggcagctc tgcgccaagt gccagccctt gcgcaatgcc aataccaatg
    10561 cgcacgccgg taaagctacc ggggccgcgc ccgtaagcca gagcgttaat atcagtcagg
    10621 gaagttccgc tggtggtcag gatatcctgc accatcggta agattcgttg agtatgttca
    10681 cgagggcaaa gctcaaaatg agcgttgaca gtaccgtcgt tccacagggc gacagagcag
    10741 gcctctgtcg cggtatcgat agccagaatt cgcatgggtc ttcgtgctta gatcaataaa
    10801 aaggcgcgca tcataccata ctccgtaaca aattacctgg aggatggtat cgcaaggaaa
    10861 cgaaccgcac gggcaatgtc acgggtgcgc ggcgcgggcg gcagactggc gagaaacgtc
    10921 gcgccgtaag ggcgcatcac cagccgattg tcacaaatca ccaaaacccc gcgatcgtcg
    10981 gcgtcgcgaa tcagtcgccc taccccctgc ttgagagtaa tcaccgcatc cggcagttgt
    11041 acttcatcga acgggtcgcc accgcgcaaa cggcaatctt ccatgcgcgc ttttaacagc
    11101 gggtcatccg gtgaggtaaa cggcaacttg tcgataatca ccaatgacaa tgtatcgcca
    11161 cgcacgtcca ccccttccca gaaactactg gttgccacaa gaagcgcgtt accggcgctg
    11221 acaaattgct gcaacagttg ccctttgctg gtttccccct gcaacaaaac gggaagcgtc
    11281 atggtagcgc ggaactgctc ggccagatca cgcatcatgg cgtgcgaggt acaaagcata
    11341 aaacaacgac cgttgttagc ttcgatgatc ggtcgcagca ttgccgctaa ctggcgagca
    11401 gaacctggct ggttggtttg cggcagattg cgcggcacac agagtaacgc ctggcggctg
    11461 taatcaaacg ggcttggcaa tagcaacgac tccgcctgtt ctatcccaag ccgcgaggtg
    11521 aaatgatgca gatcgtcgtt caccgacagc gttgctgagg tgaagatcca gctaccaggc
    11581 ttttgcgcca ttaactcttt gaatttatcc gccacgctga gcggcgtgag agccagagta
    11641 aaatggcgcg aagtgcattc gtaccagtag ctgtagcccg gctgattgat ctcttttagc
    11701 cgcttcagcc gtgtgcgata caacgtagcg cgctcaaatg ccgcatccag caaggcggaa
    11761 cgccccagtg acagtttcgc cacgtcataa caaagttcca gggtgtcatc gagcagtaaa
    11821 aatgcccgct gaatttgcgg attagctaac agctcacgca ggttaccgcg ataacctggc
    11881 tcaccgagtt gcagacgaaa atcctgcgca ctctgggcaa gacgatcagc gcacttttgt
    11941 aactgctggg tgtcttttaa ttcggtgcgg taggcgatgg tgatgtcttt tgccaggtcg
    12001 agcagttgtc gactggagag tgactgacca aaatactggc tggcaatgtc cggtagctgg
    12061 tgggcttcgt cgaagatcat gacgtccgct tccgggatca gttcgccaaa tccactctct
    12121 ttaaccacca tatccgccag aaagagatga tggtttacca ccaccacatc ggcgtccatc
    12181 gcttttttac gtgctttgac cacaaagcaa tctttataca tcgggcagtc gctgccaaga
    12241 cagttgtcgt tggtgctggt aaccagcggc cacgcctgtg aatcttccgc cacgctgacg
    12301 caggtgctga tatcaccatc gactgtttga ttagaccagg agcgcagcag gatcacatcg
    12361 cttaagattt gtaccggcag atcgcccccc gccagcgcct gctgttcgag acgttcgagg
    12421 cagaggtagt ttgagcgccc tttcagcagc gccacgttgc ccgtatattt caatgccttt
    12481 gagactgttg gcaaatcgcg gctgtagagc tgatcctgca acgcttttga gccggtcgag
    12541 ataatgactt tctttttcgc ccgcagcgca ggagccaggt aagcgtaggt tttgcccgta
    12601 ccggttcctg cttccaccac cagcggctgg cctttttcta tcgcctgggt gacggctacc
    12661 gccatctgtc gctgtggttc tcgcggctta aagcctggta tcgctttcgc cagctgaccg
    12721 tctggtgcaa aatcgtccgt cacactaccc cctgttgatt tgaacgggga ttatgtcagg
    12781 atgagggcgc tttcgccagt tgaagtggtg acggcaacct cacattgtgg cagtctttgc
    12841 agcacgaaaa tggaagtata atgaggacaa aatgatgact atcgttcgta tcgatgctga
    12901 agcccgctgg tctgatgtag taatccacaa caacacgctc tactacactg gtgtaccgga
    12961 aaacctcgac gccgatgctt ttgagcaaac cgccaacacg ctggcgcaga ttgacgccgt
    13021 gctggaaaaa cagggcagca ataaatcgag cattctggat gccaccattt tcctggctga
    13081 taaaaacgac ttcgcggcga tgaataaagc gtgggatgcc tgggttgtgg cgggtcatgc
    13141 gccggtgcgc tgcacggtgc aagcggggct gatgaacccg aagtataaag ttgaaattaa
    13201 gattgtggct gcggtgtaag ctttatcgaa gcaaaataag tcagacgatc atttatcgat
    13261 aatactggtc ggttttacat aaatcgacca gagattaaga tattactgtt gatgctcctg
    13321 ctaattcatt atttattttt ataatttcaa ttttagctat aaagcta
//
LOCUS       DADMJE010000113        13344 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.114, whole genome shotgun sequence.
ACCESSION   DADMJE010000113 DADMJE010000000
VERSION     DADMJE010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13344
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.114"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..309
                     /locus_tag="JN001_002889"
     CDS             <1..309
                     /locus_tag="JN001_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054059.1"
                     /translation="VVLNGKINGNACIVVPLSTTRDHDKLNRGMHVEIASNVINGLQF
                     FDQQIRWAKADLVQQVSRNRLNRARTYRGYLNQCLPHELVADIQRAVIKSINAILLIN
                     "
     gene            508..789
                     /gene="ppiC"
                     /locus_tag="JN001_002890"
     CDS             508..789
                     /gene="ppiC"
                     /locus_tag="JN001_002890"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004097481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase PpiC"
                     /protein_id="HAY9054060.1"
                     /translation="MAKTAAALHILVKEEKLALDLLEQIKNGADFGKLAKKHSICPSG
                     KRGGDLGEFRQGQMVPAFDKVVFSCPVLEPTGPLHTQFGYHIIKVLYRN"
     gene            complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JN001_002891"
     CDS             complement(876..2351)
                     /gene="ilvC"
                     /locus_tag="JN001_002891"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HAY9054061.1"
                     /translation="MANYFNTLNLRQQLAQLGKCRFMGRDEFADGASYLQGKKVVIVG
                     CGAQGLNQGLNMRDSGLDISYALRKEAIAEKRASWRKATENGFKVGTYEELIPQADLV
                     VNLTPDKQHSDVVRTVQPLMKDGAALGYSHGFNIVEVGEQIRKDITVVMVAPKCPGTE
                     VREEYKRGFGVPTLIAVHPENDPKGEGMAIAKAWAAATGGHRAGVLESSFVAEVKSDL
                     MGEQTILCGMLQAGSLLCFDKLVEEGTDPAYAEKLIQFGWETITEALKQGGITLMMDR
                     LSNPAKLRAYALSEQLKEIMAPLFQKHMDDIISGEFSSGMMADWANDDKKLLTWREET
                     GKTAFETAPQYEGKIGEQEYFDKGVLMIAMVKAGVELAFETMVDSGIIEESAYYESLH
                     ELPLIANTIARKRLYEMNVVISDTAEYGNYLFSYACVPLLKPFMAELQPGDLGKAIPE
                     GAVDNAQLRDVNEAIRCHAIEQVGKKLRGYMTDMKRIAVAG"
     gene            2501..3391
                     /gene="ilvY"
                     /locus_tag="JN001_002892"
     CDS             2501..3391
                     /gene="ilvY"
                     /locus_tag="JN001_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional activator IlvY"
                     /protein_id="HAY9054062.1"
                     /translation="MDLRDLKTFLHLAESRHFGRSARAMHVSPSTLSRQIQRLEEDLG
                     QPLFVRDNRTVTLTEAGEELRVFAQQTLLQYQQLRHTIDQQGPSLSGELHIFCSVTAA
                     YSHLPPILDRFRAEHPSVEIKLTTGDAADAMEKVVTGEADLAIAGKPETLPGAVAFSM
                     LENLAVVLIAPALPCPVRNQVSSEKPDWSTVPFIMADQGPVRRRIELWFRRNKISNPM
                     IYATVGGHEAMVSMVALGCGVALLPEVVLENSPEPVRNRVMILERSDEKTPFELGVCA
                     QKKRLHEPLIEAFWKILPNH"
     gene            complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JN001_002893"
     CDS             complement(3388..4932)
                     /gene="ilvA"
                     /locus_tag="JN001_002893"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase, biosynthetic"
                     /protein_id="HAY9054063.1"
                     /translation="MADSQPLSGAPEGAEYLRAVLRAPVYEAAQVTPLQKMEKLSSRL
                     DNVILVKREDRQPVHSFKLRGAYAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLG
                     VKALIVMPTATADIKVDAVRGFGGEVLLHGANFDEAKAKAIELSQQQGFTWVPPFDHP
                     MVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAEDSA
                     CLKAALDAGHPVDLPRVGLFAEGVAVKRIGDETFRLCQEYLDDIITVDSDAICAAMKD
                     LFEDVRAVAEPSGALALAGMKKYIAQHNIRGERLAHILSGANVNFHGLRYVSERCELG
                     EQREALLAVTIPEEKGSFLKFCQLLGGRAVTEFNYRFADAKNACIFVGVRLSRGLEER
                     KEILQMLNDGGYSVVDLSDDEMAKLHVRYMVGGRPSHPLQERLYSFEFPESPGALLRF
                     LNTLGTHWNISLFHYRSHGTDYGRVLAAFELGDHEPDFETRLNELGYDCHDETNNPAF
                     RFFLAG"
     gene            complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JN001_002894"
     CDS             complement(4935..6785)
                     /gene="ilvD"
                     /locus_tag="JN001_002894"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005133366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HAY9054064.1"
                     /translation="MPKYRSATTTHGRNMAGARALWRATGMTDADFGKPIIAVVNSFT
                     QFVPGHVHLRDLGKLVAEQIEAAGGVAKEFNTIAVDDGIAMGHGGMLYSLPSRELIAD
                     SVEYMVNAHCADAMVCISNCDKITPGMLMASLRLNIPVIFVSGGPMEAGKTKLSDQII
                     KLDLVDAMIQGADPKVSDSQSDQVERSACPTCGSCSGMFTANSMNCLTEALGLSQPGN
                     GSLLATHADRKQLFLNAGKRIVELTKRYYEQNDESALPRNIASKAAFENAMTLDIAMG
                     GSTNTVLHLLAAAQEAEIDFTMSDIDKLSRKVPQLCKVAPSTQKYHMEDVHRAGGVIG
                     ILGELDRAGLLNRDVKNVLGLTLPQTLEQYDVMLTQDDAVKNMFRAGPAGIRTTQAFS
                     QDCRWDTLDDDRANGCIRSLEHAYSKDGGLAVLYGNFAENGCIVKTAGVDDSILKFTG
                     PAKVYESQDDAVEAILGGKVVAGDVVVIRYEGPKGGPGMQEMLYPTSFLKSMGLGKAC
                     ALITDGRFSGGTSGLSIGHVSPEAASGGSIGLIEDGDLIAIDIPNRGIQLQVSDAELA
                     ARREAQEARGDKAWTPKNRERQVSFALRAYASLATSADKGAVRDKSKLGG"
     gene            complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JN001_002895"
     CDS             complement(6850..7779)
                     /gene="ilvE"
                     /locus_tag="JN001_002895"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain-amino-acid transaminase"
                     /protein_id="HAY9054065.1"
                     /translation="MTTKKADYIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYD
                     SHKGPVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNLTSAYIRPLIF
                     VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAK
                     AGGNYLSSLLVGSEARRHGYQEGIALDVNGYISEGAGENLFEVKDGVLFTPPFTSSAL
                     PGITRDAIIKLAKELGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVGEG
                     RCGPVTKRIQQAFFGLFTGETEDKWGWLDQVNQ"
     gene            complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JN001_002896"
     CDS             complement(7799..8062)
                     /gene="ilvM"
                     /locus_tag="JN001_002896"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 small subunit"
                     /protein_id="HAY9054066.1"
                     /translation="MMQYQVNVSARFNPETLERVLRVVRHRGFHVCSMNMAAASDAQN
                     INIELTVASPRSVDLLFSQLNKLVDVAHVAICQSTTTSQQIRA"
     gene            complement(8059..9705)
                     /locus_tag="JN001_002897"
     CDS             complement(8059..9705)
                     /locus_tag="JN001_002897"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001012636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 2 catalytic subunit"
                     /protein_id="HAY9054067.1"
                     /translation="MNGAQWVVHALRAQGVNTVFGYPGGAIMPVYDALYDGGVEHLLC
                     RHEQGAAMAAIGYARATGKTGVCIATSGPGATNLITGLADALLDSIPVVAITGQVSAP
                     FIGTDAFQEVDVLGLSLACTKHSFLVQSLEELPRIMAEAFDVASSGRPGPVLVDIPKD
                     IQLASGDLEPWFTTVENEVTFPHAEVEQARQMLAKAQKPMLYVGGGVGMAQAVPALRE
                     FLATTKMPATCTLKGLGAVEADYPYYLGMLGMHGTKAANFAVQECDLLIAVGARFDDR
                     VTGKLNTFAPHASVIHMDIDPAEMNKLRQAHVALQGDLNALLPELQQPLNINDWQQYC
                     AQLRDEHAWRYDHPGDAIYAPLLLKQLSDRKPADCVVTTDVGQHQMWAAQHIAHTRPE
                     NFITSSGLGTMGFGLPAAVGAQVARPNDTVVCISGDGSFMMNVQELGTVKRKQLPLKI
                     VLLDNQRLGMVRQWQQLFFQERYSETTLTDNPDFLMLASAFGIPGQHITRKDQVEAAL
                     DTMLNSDGPYLLHVSIDELENVWPLVPPGASNSEMLEKLS"
     gene            complement(9708..9758)
                     /locus_tag="JN001_002898"
     CDS             complement(9708..9758)
                     /locus_tag="JN001_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054068.1"
                     /translation="MNNSTKFCFSTFSTGN"
     gene            complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JN001_002899"
     CDS             complement(9845..9943)
                     /gene="ilvL"
                     /locus_tag="JN001_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ilv operon leader peptide"
                     /protein_id="HAY9054069.1"
                     /translation="MTALLRVISLVVISVVVIIIPPCGAALGRGKA"
     gene            10295..11815
                     /locus_tag="JN001_002900"
                     /pseudo
     CDS             10295..11815
                     /locus_tag="JN001_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418214.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YifB family Mg chelatase-like AAA ATPase"
     gene            complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JN001_002901"
     CDS             complement(11840..12178)
                     /gene="maoP"
                     /locus_tag="JN001_002901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="macrodomain Ori organization protein MaoP"
                     /protein_id="HAY9054070.1"
                     /translation="MAESFTTTNRYFDNKHYPRGFSRHGDFTIKEAQLLERHGYAFNE
                     LDLGKREPVTEEEKLFVAVCRGEREPVTEAERVWSKYMTRIKRPKRFHTLSGGKPQVE
                     GAEDYTDSDD"
     gene            12297..13136
                     /gene="hdfR"
                     /locus_tag="JN001_002902"
     CDS             12297..13136
                     /gene="hdfR"
                     /locus_tag="JN001_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator HdfR"
                     /protein_id="HAY9054071.1"
                     /translation="MDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLG
                     VNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWEC
                     MLNQWLGRLYQNQDAHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFSSQL
                     LGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQ
                     IAMLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLD
                     EVY"
     gene            complement(13232..13307)
                     /locus_tag="JN001_002903"
     tRNA            complement(13232..13307)
                     /locus_tag="JN001_002903"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(13272..13274),aa:Trp,seq:cca)
BASE COUNT         3096 a         3609 c         3464 g         3175 t
ORIGIN      
        1 gtcgtgctca acggaaaaat taatggcaac gcatgtatcg tcgttccatt atcaaccact
       61 cgcgatcatg acaagttaaa tcgtggaatg catgttgaaa tagccagtaa tgttatcaat
      121 ggcctgcaat tctttgatca gcagattcgt tgggccaaag ccgacctggt acaacaagtc
      181 agtcgaaacc gattaaatag agcaaggact tacagagggt atcttaatca atgtttgcca
      241 catgagttgg ttgcagacat acagagggcg gtcatcaagt caatcaatgc catattgctc
      301 ataaattgac aataaaataa ccatccccga taatgacttt gtagcccata gaggccctaa
      361 gttttctccc cttgagggac ctgcgaagcc cggattttcc gggcttttgc catatatgta
      421 ccagcccctc cctgactgac aattacgtta gcatctgcgg atcatgctaa aatcgccgcc
      481 tgacaattat tcactcaagg cacgatcatg gcaaaaacag cagcagcact gcatatcctt
      541 gtaaaagaag agaaactggc tctggatctt ctcgagcaga ttaagaacgg tgccgatttc
      601 ggcaagctgg cgaagaaaca ctccatttgc ccatcaggca aacgcggcgg tgatttaggt
      661 gaattccgcc agggtcagat ggttccggcg ttcgataaag ttgtgttctc ttgtccggta
      721 ctggagccga ccggcccgct gcacacccag ttcggttacc acatcattaa ggtgctgtac
      781 cgtaactaat agcaaggcct tctccaggag aaggccttga gtgttttctc cctctccctg
      841 tgggagaggg tcggggtgag ggcatcagcg cgcacttaac ccgcaactgc aatacgtttc
      901 atatccgtca tatagccgcg cagtttctta cctacctgct caatcgcatg gcagcgaatc
      961 gcttcgttca catcacgcag ttgcgcgtta tctaccgcac cttccggaat agctttaccc
     1021 agatcgcccg gttgcagctc tgccataaac ggtttcagca acggcacaca agcgtaagag
     1081 aacagatagt taccgtactc agcggtatca gagataacca cgttcatttc gtacagacgc
     1141 ttacgggcga tggtgttggc aatcagcggc agctcgtgca gtgattcata atatgcagac
     1201 tcttcaatga tgccggaatc gaccatggtt tcaaacgcca gctcaacgcc cgctttcacc
     1261 atcgcgatca tcagtacgcc tttatcgaag tactcctgct cgccgatttt gccttcatac
     1321 tgcggcgcgg tttcgaaggc ggttttgccg gtctcttcac gccaggtcag cagtttctta
     1381 tcatcgttgg cccagtccgc catcataccg gaggagaatt cgccggagat gatgtcgtcc
     1441 atatgtttct ggaacagggg tgccatgatc tctttcagct gttcagacag cgcgtaagca
     1501 cgcagtttcg ccgggttaga gagacggtcc atcatcaggg tgatgccgcc ctgcttcagc
     1561 gcttcggtga tggtttccca accgaactga attagttttt ctgcgtatgc cggatcggtg
     1621 ccctcttcca ccagcttgtc gaagcacagc agcgagccag cctgcaacat accgcacagg
     1681 atggtttgct cacccatcag gtcagatttc acttccgcaa cgaaggacga ttccagcacg
     1741 cccgcacggt gaccaccggt tgctgccgcc catgctttag cgatcgccat gccttcgcct
     1801 ttcggatcgt tttccgggtg aacggcaatc agcgtcggta cgccgaatcc acgtttgtac
     1861 tcttcacgca cttcggtgcc agggcatttc ggcgcaacca tgactacggt gatgtcttta
     1921 cggatctgct cgcccacttc gacgatgttg aaaccgtgcg agtaacccag cgccgcgccg
     1981 tctttcatca gtggctgtac ggtgcgcact acgtcggagt gctgcttgtc tggcgtcagg
     2041 ttaaccacca aatccgcctg cgggatcagt tcttcgtaag tgcccacttt aaaaccgttt
     2101 tcggtcgctt tacgccagga tgcgcgcttc tcggcaatcg cttctttacg cagagcgtag
     2161 gagatatcga gaccagaatc acgcatgttc aggccctggt tcagcccctg tgcgccacag
     2221 ccgacgataa ccactttttt accctgaagg tagctcgcgc cgtcggcgaa ttcgtcgcgc
     2281 cccataaagc gacatttgcc cagctgtgcc agctgctggc gcaggttcag tgtattgaag
     2341 tagttagcca tggtgattcc tcgtgatgtt gtgcttctta ttgttcggtt cgcgtttgcg
     2401 agattgaatt cactatatga caggaaattt attgcggaaa ttgatatatt cacaacgtca
     2461 cattgcaatt tctgcaacgt caacattgag ggctgctcca ttggatttac gcgatctgaa
     2521 aaccttcctg catctggcgg aaagccgcca ttttggccgc agcgcgcggg cgatgcacgt
     2581 tagcccatcc acgctctcac ggcagattca gcgcctggaa gaagatcttg gtcagccgct
     2641 atttgtgcgc gataaccgca cggtgacgct gactgaagcg ggcgaagagc tgcgcgtttt
     2701 cgcccagcaa acgctgttgc agtatcagca gttgcgccac accatcgatc agcaagggcc
     2761 gtcgctctct ggcgaattac atatcttctg ctcggtgacc gctgcctaca gccatctgcc
     2821 accgattctc gaccgcttcc gcgcggaaca cccgtcggtg gagatcaaac taaccactgg
     2881 tgatgcggca gatgcgatgg aaaaggtagt cactggcgaa gcggatctgg cgattgccgg
     2941 gaaaccggag actctgcccg gcgcagtggc gttttcgatg ctggagaatc tggcagtagt
     3001 gctgattgcg cccgcgctgc cctgcccggt gcgtaaccag gtttcgtcag agaagccgga
     3061 ctggtctaca gtgccgttta tcatggccga tcagggaccg gtacgccgcc gcattgaact
     3121 gtggtttcga cgcaataaaa tcagcaaccc gatgatttac gccacggttg gcgggcatga
     3181 agcgatggta tcgatggtgg cgctcggctg tggcgtggcg ctgttgccgg aagtagtgct
     3241 ggaaaacagc cccgaaccgg tgcgtaaccg cgtgatgatt ttagagcgca gcgatgaaaa
     3301 aacgccgttt gaactgggcg tttgtgcgca gaaaaagcgg ctgcatgagc cgctgattga
     3361 ggcgttctgg aagattttgc cgaaccatta acccgccaaa aagaacctga acgccggatt
     3421 attggtttcg tcgtggcaat cgtagcccag ctcatttagc cgggtttcga aatccggttc
     3481 atggtcgccg agttcgaacg ccgccagtac gcgcccgtag tcggtgccat ggctgcgata
     3541 gtggaacaaa gaaatgttcc agtgcgtacc cagcgtgttg aggaagcgca gcagcgcgcc
     3601 cggtgattcc gggaattcga agctgtagag gcgttcctgc aacggatgtg acggacgccc
     3661 gccgaccata tagcgcacat gcaacttcgc catttcgtcg tcggagagat ccaccacgct
     3721 gtagccgccg tcgttgagca tctgcaaaat ttctttgcgc tcttcgaggc cgcggctcag
     3781 gcgcacgccg acaaagatgc aggcgttttt ggcatcggca aaacggtagt tgaactcggt
     3841 gaccgctcgc ccgccaagca gttggcagaa tttgaggaag ctgccttttt cttccggaat
     3901 ggtcaccgcc aacaacgctt cacgctgttc gcccagttcg cagcgttccg agacgtagcg
     3961 caggccgtgg aagttcacgt tggcaccgga aagaatatgc gccagccgtt cgccgcgaat
     4021 gttgtgctgg gcgatatatt ttttcattcc cgccagcgcc agcgcgccag agggttccgc
     4081 caccgcgcgc acatcttcga ataaatcctt catcgccgca cagatcgcat cactatcgac
     4141 ggtgatgatg tcgtcgagat actcctggca taaacggaag gtttcgtcac cgatgcgttt
     4201 taccgctacg ccttcagcaa atagccctac gcgcggcaga tcaaccggat gacccgcatc
     4261 cagcgctgct ttcaggcagg cggagtcttc cgcttctacg gcgatcactt tgatttgtgg
     4321 catcagttgt ttgatcagca ccgcaacgcc cgccgccaga ccgccgccgc cgactggcac
     4381 aaatacgcgg tcgagatggg cgtcctgctg gagcagttcc agcgccagcg tgccttgccc
     4441 ggcaatcacc atcggatggt cgaacggcgg cacccaggtg aacccctgct gctgtgacag
     4501 ttcgatcgct ttagctttcg cttcgtcaaa gttcgcgcca tgaagcagca cttcgccgcc
     4561 gaatccacgt accgcatcga ctttgatgtc ggcggtggcg gttggcataa cgatcagggc
     4621 cttcacgcct aaccgcgcag aagaaaacgc gacgccctgc gcgtggttac ccgcagaagc
     4681 agtgatcacg ccgtgcgctt tttgttcttc cgtcaggccc gccatcatgg cgtatgcgcc
     4741 gcgcagctta aagctgtgca ctggctggcg atcttcgcgc ttcaccagaa tgacgttatc
     4801 aagacgcgac gacagttttt ccattttttg tagcggcgta acctgcgctg cctcgtaaac
     4861 cggcgcgcgc agcactgctc ttaaatattc ggcaccttcc ggagcaccag acaggggttg
     4921 cgagtcagcc attattaacc ccccagtttc gatttatcgc gcaccgcacc tttgtcggcg
     4981 ctggttgcca ggctggcgta ggcgcgcagg gcaaaggaaa cctgacgttc acggtttttc
     5041 ggcgtccagg ctttgtcacc ccgagcttcc tgcgcttcac gacgcgccgc cagttcggca
     5101 tcgcttacct gtaactgaat gccacggttc gggatgtcga tagcgatcag gtcaccatct
     5161 tcaatcagac caatgctgcc gccgcttgcc gcttccggtg agacgtggcc gatggaaaga
     5221 ccagaggtgc cgccagagaa acgaccgtcg gtgatcagcg cacaggcttt accgagaccc
     5281 attgatttca ggaagctggt tgggtagagc atttcctgca tgccagggcc gcctttcggg
     5341 ccttcatagc ggatcaccac cacatcgccc gcgacaactt tgccaccgag gatcgcttct
     5401 accgcgtcgt cctggctttc gtacactttt gccgggccgg tgaatttgag gatgctgtca
     5461 tcgacgcccg cggttttcac gatgcagccg ttttcagcaa aattaccgta gagcaccgcc
     5521 aggccgccgt ctttgctgta ggcgtgttcc agcgagcgga tacagccgtt tgcgcgatcg
     5581 tcgtccagcg tatcccaacg gcaatcttgc gagaatgcct gggtggtacg gatacccgca
     5641 gggccggcgc ggaacatatt ttttaccgcg tcatcctggg tcagcataac gtcgtattgc
     5701 tccagcgttt gcggcaacgt caggccgagc acgtttttca catcacggtt cagtaacccc
     5761 gcgcgatcca gttcgccgag aataccgata acaccaccag cacggtgaac atcttccata
     5821 tggtatttct gggtgctcgg cgcaacttta cacagctgtg gaaccttgcg ggaaagctta
     5881 tcgatatcac tcatggtgaa gtcgatttcc gcttcctgcg ccgccgccag caggtgaagt
     5941 acggtgttag tcgatccacc catcgcgata tccagcgtca tggcgttttc aaacgccgcc
     6001 ttactggcga tattacgcgg cagtgcactt tcgtcgtttt gctcgtaata acgtttggtc
     6061 aattcaacaa tgcgtttacc agcattaagg aacagctgct tacggtccgc gtgggttgcc
     6121 agcagcgagc cgttgcctgg ctgcgacaaa cccagcgctt cggtcaggca gttcattgag
     6181 ttagcggtaa acatcccgga gcaggaaccg caggttgggc aggcggaacg ttcaacctga
     6241 tcgctctggg agtcagaaac tttcgggtct gcgccctgga tcatcgcatc aaccagatcg
     6301 agtttgatta tctgatcgga cagtttggtt ttcccggcct ccatcgggcc gccggaaaca
     6361 aagatcaccg gaatattcag gcgcagggaa gccatcagca tccccggggt gattttgtcg
     6421 cagttagaga tgcagaccat ggcgtcggcg cagtgggcgt tgaccatata ctcaacggaa
     6481 tcagcgatca gttcgcgaga tggaagtgaa taaagcatcc ccccgtggcc catggcaatc
     6541 ccatcatcca ccgcaatggt gttgaactct ttggcaacgc cgccagccgc ttcaatttgt
     6601 tcggcgacca gtttaccgag atcgcgcaga tggacgtgac ccggtacaaa ttgggtgaac
     6661 gagttcacaa ccgcgataat cggcttgcca aaatcggcgt cggtcattcc ggtggcgcgc
     6721 cacagcgcac gagcacccgc catattacga ccatgagtgg tggtggcgga acggtactta
     6781 ggcatacttt atttactccc agtgtctgtc tcgtaaatgg gacggtgcgt gccgtcccat
     6841 tttttgtatt tattgattaa cttgatctaa ccagccccat ttatcttcgg tttcgccagt
     6901 gaagaggccg aagaaggctt gctgaatgcg tttggtaacc gggccacaac ggccttcgcc
     6961 aacctgaata ccgtctacgc tgcgcactgg cgtgatttct gccgcagtac cggacataaa
     7021 cacttcatcc gccaggtaca gggattcgcg cgacagcacc tgctcacgca cttcaattcc
     7081 cagctctttc gccagtttga tgatggcatc acgggtaata cccggcagcg cggatgaggt
     7141 aaacggtggg gtgaacagca cgccgtcttt cacttcaaac aggttttcac ctgcgccttc
     7201 agagatgtaa ccgttcacat ccagcgcgat accttcctga taaccgtggc ggcgcgcttc
     7261 gctacccacc agcagggaag agaggtagtt accaccggct tttgccgccg tcgggatggt
     7321 gtttggtgct gcgcggttcc aggaggaaac catcgcatcg atcccctgct ccagcgcttc
     7381 tgcgcccaga tacgctcccc acgggaaagc agcgataatc acgtcggttg agtatcccgc
     7441 tggcgggttt actcccatgc caacatcacc gacgaagatc agcggacgga tataggcgct
     7501 ggtgagatta tttttgcgga tcacgtcacg acaagcttcc atcagctcat caatgctctg
     7561 cgaaaccggg aagcgataga ttttggcgga gtcatgcaga cgctgcatat gctcacgatg
     7621 gcggaataca accggtcctt tgtgcgagtc gtagcaacgg atgccttcaa aaaccgaagt
     7681 gccatagtgc agcgcgtgcg acatcacatg caccttcgcg tcttcccagc gaaccatctc
     7741 cccattgaac caaatgtaat cagctttctt cgtggtcatt tttatattcc ttttgcgctc
     7801 aggcgcggat ttgttgtgat gtggttgtgc tctggcagat ggcaacgtgt gcgacgtcca
     7861 ccagtttatt taactgacta aacagtaagt cgaccgaccg tgggctggca acggtcaatt
     7921 cgatatttat attttgtgca tcgctggcgg cggccatatt cattgagcag acgtggaaac
     7981 cacgatgacg caccacgcgt aaaacacgtt ctaaggtttc cggattgaag cgagccgata
     8041 cattgacctg atattgcatc atgataattt ctccaacatt tctgaattac tggcgccagg
     8101 cggcaccagc ggccagacgt tctcaagttc gtcgattgag acatgaagca ggtatggccc
     8161 atcactgttc agcatggtgt cgagtgccgc ttcaacctgg tctttacggg tgatgtgttg
     8221 gccagggatg ccgaaggcgc tggctaacat gaggaaatcg gggttatcag taagggtggt
     8281 ttcgctgtat cgttcctgaa aaaacagttg ctgccattgt cgaaccatcc ctaaccgttg
     8341 gttatcgagt aagacgattt tcaacggtaa ctgcttgcgt tttacggtgc ccagctcttg
     8401 cacattcatc atgaaagagc cgtcaccgga gatacagacg acggtatcgt tcggtcgcgc
     8461 gacttgtgcg ccaaccgccg ctggtaaacc aaaacccata gtgcctaagc cgctggaggt
     8521 gatgaaattt tccgggcgag tgtgggcgat gtgttgcgca gcccacatct ggtgctgccc
     8581 cacatctgtg gtcacgacgc aatccgcagg tttacgatcc gacagttgtt ttaacaacaa
     8641 cggcgcgtag atagcgtcgc cgggatggtc gtaacgccag gcatgttcat cacgcagctg
     8701 cgcgcagtat tgctgccagt cattgatatt taacggctgc tgtaattctg gtaacagagc
     8761 atttaaatca ccttgtaatg ccacatgtgc ctgacgcagc ttgttcattt ctgccgggtc
     8821 gatatccata tggataacgc tggcgtgtgg tgcgaaggtg ttcagtttgc cggtcacccg
     8881 gtcatcaaaa cgtgcaccca cggcgatcag caagtcgcac tcctgcaccg cgaagttcgc
     8941 cgctttggtg ccatgcattc ccagcatgcc cagatagtac ggataatctg cttcaactgc
     9001 gcccagccct ttcagcgtgc aggtggcagg catttttgtg gtagcgagaa attctcgtaa
     9061 agcaggaact gcctgcgcca tacccacgcc accaccaacg tacagcatcg gtttttgcgc
     9121 ttttgccagc atctggcgcg cttgctcaac ttcggcatgt gggaaagtca cttcgttttc
     9181 aacggtggtg aaccacggtt ccaggtcacc gctggctagc tggatatctt ttgggatatc
     9241 gaccagaacc ggaccaggac gacctgagct ggcaacgtcg aatgcttcag ccataatgcg
     9301 cggcaactct tccagcgact gcaccagaaa gctgtgcttg gtacaggcta acgacaatcc
     9361 caggacatcc acttcctgaa atgcatcagt gccgataaac ggtgcggaca cttgaccggt
     9421 gatggcaaca acagggatag aatctaacag tgcgtccgca agcccggtta tcaggttggt
     9481 tgcgcccgga ccagacgtgg cgatacatac gccagttttg ccggtagcac gggcataacc
     9541 gatagccgcc attgccgcac cctgctcatg tcggcacagc aagtgctcca cgccgccgtc
     9601 atacaatgca tcgtaaaccg gcataattgc gccacccgga taaccgaaaa cggtgttcac
     9661 accctgtgcc cgcaacgcat gtaccaccca ctgtgcgcca ttcatagtta gttccccgtg
     9721 ctgaatgttg agaaacagaa ttttgtgctg ttattcattg tctgctcctc ggttatgttt
     9781 ttaaggtcaa aaaaaacccc cggacctttc ggtgcggggg tcttagttcg ttaaggcttg
     9841 atttctaagc ctttcctcgt ccaagtgcag ccccgcacgg tgggataata atcaccacca
     9901 cgctaatcac gaccaggcta atcactcgta gaagggctgt cattttgtct tttcttgcat
     9961 cttgttcgaa ggaatgccta aagagttacc ataggttttg taaatagtac aagatatttt
    10021 ttggccgatt tttatgatgc gtttaataat ttcaatataa gttgttgttt tttaaaaata
    10081 aaatagtgag taaaaaaatt caatttcagt atgaatgttg ttcccttcct cgtagttcat
    10141 cctttgtccg ctgcattttt gcgagcatca ttccaccgcc agaacaactc aacttcactt
    10201 gcacaaataa acaggaatca gccactaaaa ttcacgaatt agcgggctac agcagcgata
    10261 tcttatgcac ataatggtga ctcaaggagg gcttatgtca ctgtcaattg ttcatacccg
    10321 cgcagccctg ggagtaaatg cgcccccgat cactgttgag gtacatatca gtaaaggtct
    10381 acccggctta acgaaggtgg gcttaccaga aacaacggta aaagaagctc gcgatcgcgt
    10441 gcgcagcgcc attatcaata gcggatatga atatccggcg aaaaaaatca ccatcaacct
    10501 ggctccagct gatctgccaa aagaaggggg acgatatgat ttacctatcg ccattgcgtt
    10561 gctggcggcc tcagaacagc ttacagccaa taagttagat gaatatggat tagtcggaga
    10621 actggcgctt acaggcgctc tgcgtggcgt tcccggcgca atctccagta caactgaagc
    10681 tattaagtcg ggcagaaaaa ttatcgtcgc gaaagataac gaagatgaag tggggctaat
    10741 taacggtgaa ggatgcctga tagccgatca tctgcaagct gtctgtgcgt ttctggaagg
    10801 taagcacgct ctcgaacgcc cgaaaccaac tgatgcagta tcccgggcgc tacaacatga
    10861 tctcagtgat gttatcggtc aggaacaagg aaagcgagga ctggaaatta ccgccgctgg
    10921 cgggcacaac cttttactga ttgggccgcc gggaacaggt aaaacaatgc tcgccagccg
    10981 tattaatggc ctgttgccag atttaagcaa tgaagaggca ctggagagtg ctgcgatatt
    11041 aagtctggta aatgctgaat cagtacaaaa acaatggcgg cagcgcccgt tccgctcacc
    11101 tcatcacagt gcatcgttaa ctgcgatggt aggcggtggc gcaattccag ggcccggtga
    11161 aatttcgctg gcgcataacg gcgtgctttt tcttgatgag ttacctgaat ttgaaaggcg
    11221 tacactggat gccttgcgag agccgattga atccgggcag atccatcttt cacgcacgcg
    11281 agcaaaaata acctatccag cccgtttcca gcttgtcgcg gcgatgaatc ccagccctac
    11341 cggacattat cagggaaacc ataaccgctg cacaccagag caaacgctgc gttatctcaa
    11401 ccgactctct ggtccctttc tcgaccgctt cgatctctca ctggagatcc cattaccgcc
    11461 tcccggtatt ttgagtaaaa cggtagtgcc gggagaaagc agcgccaccg ttaaacaacg
    11521 cgtaatggcc gccagagagc gccaatttaa gcggcagaat aaactgaacg cctggctgga
    11581 tagtccggaa atacgccaat tctgcaaact tgagagcgaa gatgcgatgt ggctggaaga
    11641 aacgctgatc catctggggt tatcgattcg tgcctagcag cggttattga aagttgcacg
    11701 aaccattgct gatattgatc agtctgacat tatcacacgt caacatttgc aggaggcagt
    11761 tagctatcga gcgattgacc gtttgctcat ccatctgcag aaactactga cataaaaaaa
    11821 gggcatttcg ccctttttat taatcgtcag aatcggtgta gtcttcagca ccttcaacct
    11881 gcggtttacc gccggaaagg gtgtgaaaac gttttggacg cttaatacgc gtcatatact
    11941 tggaccacac gcgttctgct tctgtcactg gctcacgttc gccacggcat actgctacga
    12001 agagtttctc ttcctcggta accggctcgc gtttgccaag atccaactca ttgaaggcat
    12061 aaccatgacg ctcaagcagt tgtgcctctt tgatggtgaa atcaccatga cgagagaatc
    12121 cacgtggata atgtttattg tcgaaatatc gattagtcgt cgtaaagctt tccgccatcc
    12181 tgcacgctcc taattctttg accgagctag ttatggcgcg gagtattagt tacgcttgac
    12241 agagtgtaaa acaaaacatt taaatcataa cgacaaataa ttttgcggag agcactgtgg
    12301 atacggaatt gttaaaaact ttcctggaag ttagccgaac gcgtcacttt ggtcgagcgg
    12361 ctgaatcgct ctatctgacc cagtcagcag tgagctttcg aatcagacaa ctggaaaatc
    12421 aactgggtgt gaaccttttc acccgccaca gaaacaatat ccgtttaacc gctgccggtg
    12481 aaaaactact gccttatgca gaaacgctca tgagcacctg gcaggccgcc cgcaaggagg
    12541 tggcgcatac ctcacgacat aacgagtttt ctatcggtgc cagcgcctca ttgtgggaat
    12601 gtatgcttaa tcagtggctg ggacgtttgt atcaaaatca ggatgcccat acaggcttac
    12661 agttcgaagc gcgaattgcc caacggcagt ctctggtaaa acagctgcat gaacgccagc
    12721 ttgatcttct tattaccact gaagcgccca aaatggacga atttagtagt cagttgctgg
    12781 gatatttcac tttagcgctt tataccagtg ccccttcaaa actaaaggga gatcttaatt
    12841 atctgcgact tgagtggggg ccagattttc aacagcatga ggcaggtttg atcggtgctg
    12901 acgaagtgcc cattctgaca accagttctg ctgaactggc acagcaacag attgcgatgc
    12961 ttaatggttg cacctggcta cccgtcagct gggcgcgtaa aaaaggcggc ctgcataccg
    13021 ttgtcgatag cacaacactt tcacggccgc tttatgccat atggctgcaa aatagcgata
    13081 aaaatgcgtt gattcgcgat cttttgaaaa ttaacgtgct ggatgaagtg tattaatatg
    13141 aatggctggc aaggatgccg gtagaaggat ttacttcgga gagggttatt tcagataaaa
    13201 aaaatcctta gctttcgcta aggatgattt ctggcagggg cggagagact cgaactccca
    13261 acacccggtt ttggagaccg gtgctctacc aattgaacta cgcccctaat tagggtggcg
    13321 gaacggacgg gactcgaacc cgcg
//
LOCUS       DADMJE010000114        13097 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.115, whole genome shotgun sequence.
ACCESSION   DADMJE010000114 DADMJE010000000
VERSION     DADMJE010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13097
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.115"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            176..1150
                     /gene="cysB"
                     /locus_tag="JN001_002904"
     CDS             176..1150
                     /gene="cysB"
                     /locus_tag="JN001_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012017585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator CysB"
                     /protein_id="HAY9054072.1"
                     /translation="MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQVRMLEDEL
                     GIQIFSRSGKHLTQVTPAGQEIIRIAREVLSKVDAIKSVAGEHTWPDKGSLYIATTHT
                     QARYALPNVIKGFIERYPRVSLHMHQGSPTQIADAVSKGNADFAIATEALHLYEDLVM
                     LPCYHWNRAIVVTPDHPLAGKKAITIEELAQYPLVTYTFGFTGRSELDTAFNRAGLTP
                     RIVFTATDADVIKTYVRLGLGVGVIASMAVDPVADPDLVRVDAHDIFSHSTTKIGFRR
                     STFLRSYMYDFIQRFAPHLTRDVVDAAVALRSNEEIEVMFKDIKLPEK"
     gene            1445..1609
                     /locus_tag="JN001_002905"
     CDS             1445..1609
                     /locus_tag="JN001_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmiA family putative membrane protein"
                     /protein_id="HAY9054073.1"
                     /translation="MLISDGDYMRLAMPSGNQEPRRDPELKRKAWLAVFLGSALFWVV
                     VALLIWKVWG"
     gene            1612..1779
                     /locus_tag="JN001_002906"
     CDS             1612..1779
                     /locus_tag="JN001_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054074.1"
                     /translation="MVGQEQLESSPLCQHSDNETETKRECSVVIPDDWQLTSQQQAFI
                     ELFAEDDQPKQ"
     gene            1893..1988
                     /locus_tag="JN001_002907"
     CDS             1893..1988
                     /locus_tag="JN001_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054075.1"
                     /translation="MINTNMKYWSWMGAFSLSMLFWAELLWIITH"
     gene            2152..4827
                     /gene="acnA"
                     /locus_tag="JN001_002908"
                     /pseudo
     CDS             2152..4827
                     /gene="acnA"
                     /locus_tag="JN001_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415792.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
     gene            complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JN001_002909"
     CDS             complement(4891..5481)
                     /gene="ribA"
                     /locus_tag="JN001_002909"
                     /EC_number="3.5.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase II"
                     /protein_id="HAY9054076.1"
                     /translation="MQLKRVAEAKLPTPWGDFLMVGFEELATGHDHVALVYGDISGHT
                     PVLARVHSECLTGDALFSLRCDCGFQLEAALTQIAEEGRGILLYHRQEGRNIGLLNKI
                     RAYALQDQGYDTVEANHQLGFAADERDFTLCADMFKLLGVNEVRLLTNNPKKVEILTE
                     AGINIVERVPLIVGRNPNNEHYLDTKAEKMGHLLNK"
     gene            5651..6415
                     /gene="pgpB"
                     /locus_tag="JN001_002910"
     CDS             5651..6415
                     /gene="pgpB"
                     /locus_tag="JN001_002910"
                     /EC_number="3.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase B"
                     /protein_id="HAY9054077.1"
                     /translation="MRSIARRTAVGAALLLVMPVAVWISGWRWQPGEQSWLLKAAFWV
                     TETVTQPWGVITHLILFGWFLWCLRFRIKAAFVLFAILAAAILVGQGVKSWIKDKVQE
                     PRPFVIWLEKTHHIPVDEFYTLKRAERGNLVKEQLAEEKNIPQYLRSHWQKETGFAFP
                     SGHTMFAASWALLAVGLLWPRRRTLTIAILLLWATGVMGSRLLLGMHWPRDLVVATLI
                     SWALVAVATWLAQRICGPLTPPAEENREIAQREQES"
     gene            6564..6872
                     /gene="lapA"
                     /locus_tag="JN001_002911"
     CDS             6564..6872
                     /gene="lapA"
                     /locus_tag="JN001_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapA"
                     /protein_id="HAY9054078.1"
                     /translation="MKYLLIFLLVLAIFVISVTLGAQNDQQVTFNYLLAQGEYRISTL
                     LAVLFAAGFAIGWLICGLFWLRVRVSLARAERKIKRLENQLSPATDVAVVPHSSAAKE
                     "
     gene            6879..8048
                     /gene="lapB"
                     /locus_tag="JN001_002912"
     CDS             6879..8048
                     /gene="lapB"
                     /locus_tag="JN001_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide assembly protein LapB"
                     /protein_id="HAY9054079.1"
                     /translation="MLELLFLLLPVAAAYGWYMGRRSAQQNKQDEANRLSRDYVAGVN
                     FLLSNQQDKAVDLFLDMLKEDTGTVEAHLTLGNLFRSRGEVDRAIRIHQTLMESASLT
                     YEQRLLAIQQLGRDYMAAGLYDRAEDMFNQLTDETDFRIGALQQLLQIYQATSEWQKA
                     IDVAERLVKLGKDKQRVEIAHFYCELALQHMASDDLDRAMTLLKKGAAADKNRARVSI
                     MMGRVFMAKGEYAKAVESLQRVISQDRELVSETLEMLQTCYQQLGKTAEWAEFLQRAV
                     EENTGADAELMLADIIEARDGSEAAQVYITRQLQRHPTMRVFHKLMDYHLNEAEEGRA
                     KESLMVLRDMVGEKVRSKPRYRCQKCGFTAYTLYWHCPSCRAWSTIKPIRGLDGL"
     gene            8241..8978
                     /gene="pyrF"
                     /locus_tag="JN001_002913"
     CDS             8241..8978
                     /gene="pyrF"
                     /locus_tag="JN001_002913"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HAY9054080.1"
                     /translation="MTLTASSSSRAVTNSPVVVALDYHNRDDALSFVDKIDPRDCRLK
                     VGKEMFTLFGPQFVRELQQRGFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASG
                     GARMMTAAREALVPFGKDAPLLIAVTVLTSMEASDLADLGVTLSPADYAERLAALTQK
                     CGLDGVVCSAQEAVRFKQVFGQEFKLVTPGIRPQGSDAGDQRRIMTPEQALAAGVDYM
                     VIGRPVTQSVDPAQTLKAINASLQRSA"
     gene            8978..9304
                     /gene="yciH"
                     /locus_tag="JN001_002914"
     CDS             8978..9304
                     /gene="yciH"
                     /locus_tag="JN001_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415798.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response translation initiation inhibitor
                     YciH"
                     /protein_id="HAY9054081.1"
                     /translation="MSDSNSRLVYSTETGRIDEPKAAPVRPKGDGVVRIQRQTSGRKG
                     KGVCLITGIDLDDAELTKLAAELKKKCGCGGAVKDGVIEIQGDKRDLLKSLLEAKGMK
                     VKLAGG"
     gene            complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JN001_002915"
     CDS             complement(9430..9648)
                     /gene="osmB"
                     /locus_tag="JN001_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmB"
                     /protein_id="HAY9054082.1"
                     /translation="MFVTSKKMTAAVLAITLAMSLSACSNWSKRDRNTAIGAGAGALG
                     GAVLTDGSTLGTLGGAAVGGVIGHQVGK"
     gene            complement(9917..10666)
                     /locus_tag="JN001_002916"
     CDS             complement(9917..10666)
                     /locus_tag="JN001_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY9054083.1"
                     /translation="MNSRQQTILQMVIDQGQVSVTDLAKATGVSEVTIRQDLNTLEKL
                     SYLRRAHGFAVSLDSDDVETRMMSNYTLKRELAEFAASLVQPGETIFIENGSSNALLA
                     RTLGEQKKNVTIITVSSYIAHLLKDAPCEVILLGGVYQKKSESMVGPLTRQCIQQVHF
                     SKAFIGIDGWQPETGFTGRDMMRTDVVNAVLEKECEVIVLTDSSKFGAVHSYSIGPVE
                     RFNRVITDSKIRASDLMHLEHSKLTVHVVDI"
     gene            complement(10756..10929)
                     /locus_tag="JN001_002917"
     CDS             complement(10756..10929)
                     /locus_tag="JN001_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054084.1"
                     /translation="MSEFDAQRVAERIDIVLDILVAGDYHSAIHNLEILKAELLRQVA
                     ESTPDIPKAPWEI"
     gene            complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JN001_002918"
     CDS             complement(11076..13061)
                     /gene="pdeR"
                     /locus_tag="JN001_002918"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic di-GMP phosphodiesterase"
                     /protein_id="HAY9054085.1"
                     /translation="MKTVRESTTLYNFLGSHNPYWRLTESSDVLRFSTTETTEPDRTL
                     QLSAEQAARIREMTVITSSLMMSLTVDESDLSVHLVGRKINKREWAGNASAWHDTPAV
                     ARDLSHGLSFAEQVVSEAHSAIVILDSRGNIQRFNRLCEDYTGLKEHDVIGQSVFKLF
                     MSRREAAASRRNNRVFFRSGNAYEVELWIPTCKGQRLFLFRNKFVHSGSGKSEIFLIC
                     SGTDITEERRAQERLRILANTDSITGLPNRNAMQDLIDHAINHADNNKVGVVYLDLDN
                     FKKVNDAYGHLFGDQLLRDVSLAILSCLEHDQVLARPGGDEFLVLASNTSQSALEAMA
                     SRILTRLRLPFRIGLIEVYTSCSVGIALSPEHGSDSTAIIRHADTAMYTAKEGGRGQF
                     CVFTPEMNQRVFEYLWLDTNLRKALENDQLVIHYQPKITWRGEVRSLEALVRWQSPER
                     GLIPPLDFISYAEESGLIVPLGRWVILDVVRQVAKWRDKGINLRVAVNISARQLADQT
                     IFTALKQVLQELNFEYCPIDVELTESCLIENDELALSVIQQFSQLGAQVHLDDFGTGY
                     SSLSQLARFPIDAIKLDQVFVRDIHKQPVSQSLVRAIVAVAQALNLQVIAEGVESAKE
                     DAFLTKNGINERQGFLFAKPMPAVAFERWYKRYLKRA"
BASE COUNT         3333 a         3084 c         3294 g         3386 t
ORIGIN      
        1 tcgcgaaagc ggcccttttt tattgcatat tattttttct tcacacctat acactaaggc
       61 tataaatgat atagtggtta tagttagcac cttttttatt attaaatcgt attagtcacc
      121 cgccaggtgt gacgaaaaaa cgatgttctg atggcgtcta agtggatggt ttaacatgaa
      181 attacaacaa cttcgctata ttgttgaggt ggtcaatcat aacctgaatg tctcatcaac
      241 agcggaagga ctttacacat cacaacccgg gatcagtaaa caagtcagaa tgctggaaga
      301 cgagctaggc attcaaattt tttcccgaag cggcaagcac ctgacgcagg taacgccagc
      361 agggcaagaa ataattcgta tcgctcgcga agtcctgtcg aaagtcgatg ccataaaatc
      421 ggttgccgga gagcacacct ggccggataa aggctcactg tatatcgcca ccacgcatac
      481 ccaggcacgc tacgcattac caaacgtcat caaaggcttt attgagcgtt atcctcgcgt
      541 ttctttgcat atgcaccagg gctcgccgac acaaattgct gatgccgtct ctaaaggcaa
      601 tgccgatttc gctatcgcca cagaagcgct gcatctgtat gaagatttag tgatgttacc
      661 gtgctaccac tggaatcggg ctattgtagt cactccggat cacccgctgg caggcaaaaa
      721 agccattacc attgaagaac tggcgcaata tccgttggtg acatatacct tcggctttac
      781 cggacgttca gaactggata ctgcctttaa ccgcgcaggg ttaacgccgc gtatcgtttt
      841 cacggcaacg gatgctgacg tcattaaaac ttacgtccgg ttagggctgg gggtaggggt
      901 cattgccagc atggcggtgg atccggtcgc cgatccggac cttgtgcgcg ttgatgctca
      961 cgatatcttc agccacagta caaccaaaat tggttttcgc cgtagtactt ttttgcgcag
     1021 ttatatgtat gatttcattc agcgttttgc accgcattta acgcgtgatg tcgttgatgc
     1081 ggctgtcgca ttgcgctcta atgaagaaat tgaggtcatg tttaaagata taaaactgcc
     1141 ggaaaaataa tttcttgcgt tattttcggc accttttatg tagcgaaggt gccggaatat
     1201 attctctttt gttacttatt tttataccgt gcacaatatt tttatccctc atatttatag
     1261 ggtaaattac ctgtaaagta gtgtctaatt acccgcctcg caaattccag ttttcaaata
     1321 tctatttcag gtcaaaagat tgaattattc actggagacg attcgtaaat tcgctggatt
     1381 tttgactaaa gtttctttag gatttgtctc atcgtatgat taattacacc aatcgttcaa
     1441 cgtcttgctg ataagtgatg gcgattatat gaggttagca atgccttctg gaaatcagga
     1501 accccgccgc gatcctgaat taaaacgtaa agcctggctg gcggtttttc ttggttctgc
     1561 acttttctgg gtggttgtcg cactgctgat ttggaaagtg tggggataac tatggtcggt
     1621 caggagcaac tggagtcgtc accattatgc cagcatagtg acaatgaaac agaaacgaaa
     1681 cgggaatgtt ccgtcgttat tccagacgac tggcaactaa catcgcagca gcaagccttt
     1741 atagaactgt ttgctgaaga tgatcagccg aaacaataat tatcatcatt cttattaccc
     1801 atttttaatg aattaaaggg cttttaatac accgcagcaa taacagcttg agttatctca
     1861 acacaaaata ataaccgtta agggtgtagc ctatgatcaa cacaaatatg aaatattggt
     1921 cctggatggg cgcgttttct ctgtcgatgc tcttctgggc cgaactcctc tggatcatta
     1981 ctcactgatc cttgaccccg ctgcggcggg gttgtcattt gctttgccac aaggtttctc
     2041 ctcttttatc aatttgggtt gttatcaaat cgttacgcga tgtttgtgtt atctttaata
     2101 ttcaccctga agagaatcag ggcttcgcaa ccctgtcatt aaggaggagc tatgtcgtca
     2161 accctacgag aagccagtaa ggacacgttg caggccaaag ataaaactta ccactactac
     2221 agcctgccgc ttgctgctaa atcactgggc gatatcaccc gtctacccaa gtcactcaaa
     2281 gttttgctcg aaaacctgct gcgctggcag gatggtaact cggttaccga agaggatatc
     2341 cacgcgctgg caggatggct gaaaaatgcc catgctgacc gtgaaattgc ctaccgcccg
     2401 gcaagggtgc tgatgtagga ctttaccggc gtacctgccg ttgttgatct ggcggcaatg
     2461 cgcgaagcgg ttaaacgcct cggcggcgat actgcaaagg ttaacccgct ctcaccggtc
     2521 gacctggtca ttgaccactc ggtgaccgtc gatcgttttg gtgatgatga ggcatttgaa
     2581 gaaaacgtac gcctggaaat ggagcgcaac cacgaacgtt atgtgttcct gaaatgggga
     2641 aagcaagcgt tcagtcggtt tagcgtcgtg ccgccaggca caggcatttg ccatcaggtt
     2701 aacctcgaat atctcggcaa agcagtgtgg agtgaattgc aggacggtga atggattgct
     2761 tatccggata cactcgttgg tactgactcg cacaccacta tgatcaacgg ccttggcgtg
     2821 ctggggtggg gcgtgggtgg gatcgaagca gaagccgcaa tgttaggcca gccggtttcc
     2881 atgcttatcc cggacgtagt gggctttaaa cttaccggta aattacgtga aggtattacc
     2941 gccacagacc tggttctcac tgttacccaa atgctgcgca aacatggcgt ggtggggaaa
     3001 ttcgtcgaat tttatggtga tggtctggat tcactaccgc tggcggatcg cgccaccatt
     3061 gccaatatgt cgccagaata tggtgccacc tgtggcttct tcccaatcga tgctgtaacc
     3121 ctcgattaca tgcgtttaag cgggcgcagc gaagatcagg ttgagttggt cgaaaaatat
     3181 gccaaagcgc agggcatgtg gcgtaacccg ggcgatgaac cgatttttac cagtacgtta
     3241 gaactggata tgaatgacgt tgaagcgagc ctggcagggc caaaacgccc acaggatcgc
     3301 gttgcactgc ccgatgtacc aaaagcattt gccgccagta acgaactgga agtgaatgcc
     3361 acgcataaag atcgccagcc ggtcgattat gttatgaacg gacatcagta tcagttacct
     3421 gatggcgctg tggtcattgc tgcgataacc tcgtgcacca acacctctaa cccaagtgtg
     3481 ctgatggccg caggcttgct ggcgaaaaaa gccgtaactc tgggcctcaa gcggcaaccg
     3541 tgggtcaaag cgtcgctggc accgggttcg aaagtcgttt ctgattatct ggcaaaagcg
     3601 aaactgacac cgtatctcga cgaactgggg tttaaccttg tgggatacgg ttgtaccacc
     3661 tgtattggta actctgggcc gctgcccgat cctatcgaaa cggcaatcaa aaaaggcgat
     3721 ttaaccgtcg gtgcggtgct gtccggcaac cgtaactttg aaggccgtat ccatccgctg
     3781 gttaaaacta actggctggc ctcgccgccg ctggtggttg cctatgcgct ggcgggaaat
     3841 atgaatatca acctggctgc tgagcctatt ggtcatgatc gtaaaggcga cccggtttat
     3901 ctgaaagata tctggccatc ggcacaggaa attgcccgtg cggtagaaca agtctccaca
     3961 gaaatgttcc gtaaagagta cgcagaagtt tttgaaggca cagcagagtg gaaggaaatt
     4021 aacgtcacac gatccgatac ctacggttgg caggaggatt caacctatat tcgcttatcg
     4081 cctttctttg atgaaatgca ggcaacacca gcacctgtgg aagatattca cggtgcgcgg
     4141 atcctcgcaa tgctggggga ttcagtcacc actgaccata tctctccggc gggcagtatt
     4201 aagcccgaca gcccggcggg tcgatatcta caaggtcggg gtgttgagcg aaaagacttt
     4261 aactcctacg gttcgcggcg tggtaaccat gaagtgatga tgcgcggcac cttcgccaat
     4321 attcgcatcc gtaatgaaat ggtgcctggc gttgaagggg ggatgacgcg gcatttacct
     4381 gacagcgatg ttgtctctat ctatgatgcc gcgatgcgct ataagcagga gcaaacgccg
     4441 ctggcggtga ttgccgggaa agagtatgga tcaggctcca gccgtgactg gacggcaaaa
     4501 ggtccgcgtc tgcttggtat tcgtgtggtg attgccgaat cgtttgaacg aattcaccgt
     4561 tcgaatttaa ttggcatggg catcttgccg ctggaatttc cgcaaggcgt gacgcgtaaa
     4621 acgttagggc taaccgggga agagaagatt gatattggcg acctgcaaaa tctacaaccc
     4681 ggcgcgacgg ttccggtgac gcttacgcgc gcggatggta gccaggaagt cgtaccctgc
     4741 cgttgtcgta tcgacaccgc gacggagttg acctactacc agaacgacgg cattttgcat
     4801 tatgtcattc gtaatatgct gaagtaacaa gtatttgctt gccggttatt ttgcttccgg
     4861 caagcaaatt aattccacaa tgcgagaggg ttatttgttc agcaaatgac ccattttctc
     4921 ggctttggta tcgagataat gttcgttatt ggggttacga cctacaatca atggtacgcg
     4981 ttcaacaata ttaatccctg cttcggtcag aatttcgact tttttcgggt tattggttaa
     5041 caagcggact tcattgacgc caaggagttt gaacatatca gcgcaaagag tgaagtcgcg
     5101 ctcatcagcg gcgaagccta actggtggtt agcctctacg gtatcgtaac cttgatcctg
     5161 cagtgcgtaa gcgcggattt tattcagcag accaatgtta cgaccttcct gacggtgata
     5221 cagcaaaata ccacggcctt cctcggcaat ttgcgtcaat gccgcttcga gctggaagcc
     5281 acaatcgcag cgcaagctga acagggcgtc accggtcaga cattcggaat ggacgcgcgc
     5341 aagtaccggg gtatgcccgg aaatatcgcc atagactagc gcgacatgat cgtgtccggt
     5401 tgccagttct tcaaatccca ccatcaggaa atcgccccat ggggttggca gtttggcttc
     5461 tgccacacgt ttaagctgca tgaaattctc cagataatgc tggttctgta ttggcttatt
     5521 ttgccataac gagaaggggt tcacctaatc acgacgcgtc gatcgttcac ggaatggcac
     5581 aaatctgtca atttttcctg gaactggcgt tttcagttat gattgtggga cttatcaaaa
     5641 aggagaggcc atgcgttcga ttgccagacg taccgcagtg ggagctgcac tattgcttgt
     5701 catgccagta gccgtatgga tttctggctg gcgttggcaa cctggagaac aaagttggct
     5761 actaaaagcg gctttttggg ttactgaaac tgtcacccag ccctggggcg tcattacaca
     5821 tttgatttta ttcggctggt ttctctggtg tctgcgtttt cgcattaagg ctgcctttgt
     5881 attatttgcc attctggcgg ccgcaatcct tgtgggacaa ggcgttaaat cctggatcaa
     5941 agacaaagtc caggaaccac gaccttttgt tatctggctg gaaaaaacac atcatattcc
     6001 ggttgatgag ttctacactt taaagcgagc agaacgcgga aatctagtga aagaacagtt
     6061 ggctgaagag aaaaatatcc cacaatattt gcgttcacac tggcagaaag agacggggtt
     6121 tgcctttcct tccggtcaca cgatgtttgc tgccagttgg gcactgctgg ccgttggttt
     6181 gctgtggccg cgtcggcgaa cgttaaccat tgctatcttg ctgctctggg caacgggagt
     6241 catgggaagc cgcctgctgc tcgggatgca ttggccacgc gatctggtag tagctacatt
     6301 gatttcgtgg gcgctggtgg cggtggcaac gtggcttgcg caacgaattt gtgggccatt
     6361 aacaccacct gcggaagaaa atcgcgaaat agcgcaacga gaacaagaaa gttaacgctg
     6421 gttgattttc cgaatttagc ccttaaatca tcaacaatgc gcgtggatgc catttcgcag
     6481 acggcgcgaa aatggtactt taaagggcta ttgcggtaag ttgaccataa tttattcgct
     6541 ctaaccacat aacgggaagt aatgtgaaat atttactcat tttcttactg gtgttagcga
     6601 tcttcgtgat ttcggtcacg ttgggtgcgc agaacgatca acaggtgacg tttaattatc
     6661 tgttagcgca aggggagtac cgtatttcca cattgctggc ggtattgttt gctgcggggt
     6721 ttgctatcgg ttggttgatt tgtggcctgt tctggctgcg agttcgtgtt tccctggcgc
     6781 gcgctgaacg taaaataaag cgactggaaa accagctttc acccgcgact gacgtggctg
     6841 tagtgccgca ctcgtcagcg gcgaaggaat aactttctat gctggagttg ttgtttctgc
     6901 ttttgcctgt agccgctgcc tatggctggt atatgggccg cagaagtgcg caacaaaaca
     6961 agcaagatga agccaaccgc ttgtcgcgtg attacgtagc gggggttaac ttcctgctta
     7021 gtaatcaaca ggataaagcg gtagacctgt ttctcgatat gcttaaagag gatacaggca
     7081 ccgttgaagc ccaccttacg ctcggaaacc tgttccgttc gcgtggcgaa gttgatcgcg
     7141 ctattcgcat ccatcagacc ctaatggaaa gcgcctcgct gacctatgaa cagcgtctgt
     7201 tggcgattca acaactaggg cgtgattaca tggccgccgg gttatacgac cgcgcggaag
     7261 acatgttcaa tcagctgacc gatgaaactg acttccgcat tggcgctctg caacagttgc
     7321 tacaaatcta ccaggctacc agtgagtggc agaaagcaat tgatgttgcc gaacgcctgg
     7381 tgaagctggg taaagataaa cagcgcgtcg aaattgccca tttctactgt gagttagccc
     7441 tgcagcatat ggccagcgac gatctcgatc gtgccatgac cttgctaaaa aaaggggcgg
     7501 cggcagataa aaacagagcc cgcgtatcca tcatgatggg acgcgtgttt atggcgaaag
     7561 gagaatacgc caaagccgtc gaaagtttgc aacgcgtgat atcccaggac agagaactgg
     7621 tcagcgaaac gctggaaatg ttgcaaacct gctatcagca gttgggtaaa actgccgaat
     7681 gggcagaatt cctgcaacgc gcggtggaag agaacaccgg tgccgatgct gaattgatgc
     7741 ttgctgatat catcgaagcg cgcgacggta gtgaggccgc acaggtctat attacgcgcc
     7801 agcttcagcg tcatccgacc atgcgtgtgt tccataagtt aatggattac cacttaaatg
     7861 aagcggaaga agggcgtgcc aaagagagcc tgatggtgct gcgtgacatg gttggcgaaa
     7921 aggtacgtag taagcctcgt tatcgctgcc agaaatgtgg ttttaccgca tacaccctct
     7981 actggcattg tccgtcttgt cgggcctggt caaccattaa accgattcgc ggtcttgatg
     8041 gcctgtaatt tttaaaaaaa tccgacttta gttacaacat gctagttatt gatgttccat
     8101 tgtgctccgg caacgacgga gcagaaaaag cctgccaggg gaaaaatcgc aactgttaat
     8161 tttttatttc cacgggtaga atgctcgccg tttacctgtt tcgcgccact tccggtgccc
     8221 atcatcaaga aggtctggtc atgacgttaa ctgcttcatc ttcttcccgc gctgttacga
     8281 attctcctgt ggttgttgcc cttgattatc ataatcgtga tgacgcgctg tcctttgtcg
     8341 acaagatcga cccacgcgat tgtcgtctga aggtcggcaa agagatgttt acattgtttg
     8401 ggccacagtt tgtgcgcgaa cttcaacagc gtggttttga tatctttctt gacctgaaat
     8461 tccacgatat tcctaacact gcagcgcacg ctgtcgctgc tgcagctgac ttaggcgtgt
     8521 ggatggtgaa tgttcatgcc tctggtgggg cgcgtatgat gaccgcagcg cgtgaggcac
     8581 tggttccgtt tggcaaagat gcaccgcttt tgattgctgt aacagtgttg accagcatgg
     8641 aagctagcga cctggccgat cttggcgtga cactgtcacc tgcagattat gcagaacgtc
     8701 tggcggcact gacgcaaaaa tgtggccttg atggtgtggt gtgttctgct caggaagctg
     8761 tgcgctttaa acaggtattc ggtcaggagt tcaaactggt tacaccgggc attcgtccgc
     8821 aggggagtga tgctggtgac cagcgccgca ttatgacgcc agaacaggcg ttggcggctg
     8881 gtgttgatta tatggtgatt ggtcgcccgg taacgcaatc ggtagatcca gcgcaaacac
     8941 tgaaagcgat caacgcctct ttacagcgga gtgcatgatg agtgattcca acagccgtct
     9001 ggtctactca acggaaaccg gacgtattga tgagccaaaa gcggccccag tacgccctaa
     9061 aggcgatggt gtggtgcgta ttcagcgtca gaccagtgga cgtaaaggta agggcgtttg
     9121 cctgattacc ggtatcgatc tcgatgatgc cgaactgaca aaacttgcag cggaactgaa
     9181 gaaaaaatgc ggctgcggcg gagcagttaa agatggagtt attgaaatcc agggcgataa
     9241 gcgtgattta ttaaaatcac tacttgaagc gaaagggatg aaggtaaaac tcgcaggcgg
     9301 ttaacataaa aagccacgga tatatccgtg gctttcgaat attttactgt gtgtattatt
     9361 cagttatttc gtactgaaca aaatcaagcg tattataatt gcgagtcgat aatcgacatt
     9421 tatttacgat tatttaccga cctggtgacc aataacacca ccgacagctg caccacctaa
     9481 tgtacccaac gtactgccat cggtcagtac tgcaccgcct aatgcccctg cacccgcgcc
     9541 gattgcggtg ttgcggtccc gtttagacca gttagaacag gcactcagag acattgccaa
     9601 agtaattgcc agaacagccg cggtcatttt tttgctcgtt acaaacataa tactctctcc
     9661 tgaatttatg attcacggaa gtaagctctc tataactata atagctaaga ataagcctgg
     9721 tgaaattatt ccgtgaaatc tgctcgcgcg cagggttata tcacgcaggt gataatgact
     9781 tcctgttata tcgctgataa taattttata tcttaagcgt gttaataaca ggtaaatagt
     9841 cttaattatc aaccaggaat catcttagag cggatgattt gccaaactgc aaatcatccg
     9901 tagagaaggg aaatggttaa atgtcaacga cgtgaacggt gagtttactg tgctcaagat
     9961 gcatcagatc gctggcgcgt attttcgaat cggtaatcac gcgattgaat cgctcaacgg
    10021 gaccgatgga gtatgaatgt acagcaccaa atttcgagct gtcagtcagg actatcactt
    10081 cgcactcttt ttccagcacg gcattgacca catcggtacg catcatatcg cgaccggtga
    10141 atccagtttc aggttgccag ccatcaatac caataaatgc tttgctgaaa tgcacctgct
    10201 ggatgcactg gcgtgtcaac gggccaacca tactttcgct ttttttctgg tacacgccac
    10261 cgagcaaaat gacttcacaa ggcgcgtctt tcagcaaatg cgcgatgtag ctgctgaccg
    10321 tgatgatagt gacatttttc ttctgctccc ccagagtccg ggcgagcagg gcattgctgc
    10381 tgccattttc gataaagatg gtttcgcccg gttgaaccag tgacgcggca aactcggcga
    10441 gttcacgctt cagcgtatag ttgctcatca tacgggtttc gacgtcatca ctatcaagcg
    10501 aaactgcaaa gccatgtgca cggcggaggt aactcagttt ttcgagggtg ttgagatcct
    10561 ggcgaatggt aacttcagaa actccagtgg cttttgccag atcggttacg ctaacctgac
    10621 cctggtcaat gaccatctgt agaatagttt gttgtcggga attcatcgct gtaattctta
    10681 taacgttata atactaaata aaaaaatact gacgcgccgg gcatcctcaa ataggaaaac
    10741 ctgaaggcac gattgttaaa tctcccacgg tgccttcggg atgtctggcg tagattcagc
    10801 aacctggcgc aagagttctg ctttaagtat ctcgagatta tggatcgcag agtggtaatc
    10861 gcctgccaca aggatatcta acacaatatc aatacgttcg gcaacgcgct gggcatcaaa
    10921 ttcagacatc aaggacatcc ttatagcaaa agtggaaaat gaataatgca aaaattgccg
    10981 ctaaaagaga agtgtttaac agcaacggct aattatcatc caggaatacg atatataatg
    11041 acgggatata gcgctaagta tatatattca tctacttatg cgcgcttcag atagcgttta
    11101 taccagcgtt cgaaggcgac ggcgggcatc ggtttggcaa acaaaaatcc ttgccgctca
    11161 ttgatcccgt tcttggttaa aaaagcatct tcctttgcac tctctacacc ttcggcgatc
    11221 acctgaagat tcaatgcctg ggccacagcg acgatcgccc ggaccagtga ctgcgagaca
    11281 ggttgtttgt gaatatctcg aacaaaaacc tggtcaagtt tgatggcatc gatcggaaag
    11341 cgcgccagtt gcgaaagtga agagtagccg gtaccaaaat catccagatg cacttgcgca
    11401 cctagttggc taaattgttg aataacagac agtgccagtt catcattctc aatcagacaa
    11461 ctctctgtca gttcaacatc tatagggcag tattcaaaat tgagttcctg gagaacctgt
    11521 ttcagggcgg tgaaaatggt ttgatcggcg agctgacgtg cagaaatatt taccgccact
    11581 cgcaggttta tgcctttatc ccgccacttt gccacctggc gtacgacatc gagaatcacc
    11641 caacggccta aaggcacaat tagccctgac tcttcggcgt aggaaatgaa gtccaacggt
    11701 ggaatcaacc cacgttcagg tgactgccaa cgtactagtg cttccagact gcgcacttcg
    11761 ccacgccagg tgattttcgg ttgatagtga ataaccaact gatcgttttc cagtgcttta
    11821 cgcaagttgg tatccagcca gagatattca aatacccgtt gattcatttc tggggtaaaa
    11881 acgcaaaatt gtcctcgtcc gccttccttc gctgtgtaca ttgctgtgtc ggcgtgacga
    11941 ataatagccg tgctgtctga accatgttcg ggagagagtg caatacctac tgaacagctg
    12001 gtataaactt caattaaacc aatgcgaaag gggagccgta agcgggtcaa aattcgtgat
    12061 gccattgctt ccagcgcgct ttgtgaggtg ttggatgcca gtaccagaaa ctcatcccca
    12121 cctggacgcg ccaacacctg gtcatgttcg agacagctta aaatagccaa tgacacgtcg
    12181 cgtaataact ggtcaccaaa caaatgccca taggcgtcgt tgaccttttt gaaattatcc
    12241 aaatcaagat acacaacccc aactttattg ttatctgcat gattaatagc gtgatcgatt
    12301 aaatcctgca ttgcgttacg attcggcagt ccggtgatac tgtcggtatt tgccagaata
    12361 cgcagtcgct cctgagcgcg gcgctcttcg gtaatgtcgg tgccggaaca gattaaaaaa
    12421 atctcgcttt tgccactgcc gctgtggaca aatttattgc gaaacagaaa cagccgctgg
    12481 cctttacatg ttggtatcca cagttcgact tcatatgcat tgccgcttcg aaaaaataca
    12541 cggttattgc gcctggatgc cgcagcttca cgacggctca taaacagttt aaacacgctt
    12601 tggccaatga cgtcgtgttc tttcaaccca gtgtaatctt cacataaccg attgaagcgt
    12661 tggatattcc cccggctgtc gagaatcact attgcggaat gtgcttcaga aactacctgc
    12721 tcagcaaagg aaagcccgtg tgataaatca cgagcaactg ccggtgtgtc atgccatgca
    12781 gacgcgttgc cagcccattc ccgtttattg atttttcgtc ctaccagatg cacagaaaga
    12841 tcgctctcat cgacggtcag actcatcatc aggctggagg tgatgaccgt catttccctg
    12901 atgcgagcag cctgttcggc agataactgc aaagtacgat caggttctgt ggtttcggtg
    12961 gtagaaaagc gcaaaacatc gctgctttcc gtcaaccgcc agtatggatt gtgcgatccg
    13021 agaaagttgt acaacgttgt ggactcccta acggttttca tgatgcatat cctccggtta
    13081 aataaaagga acaacat
//
LOCUS       DADMJE010000115        13092 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.116, whole genome shotgun sequence.
ACCESSION   DADMJE010000115 DADMJE010000000
VERSION     DADMJE010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 13092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13092
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.116"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            4..1632
                     /locus_tag="JN001_002919"
     CDS             4..1632
                     /locus_tag="JN001_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001381416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin family protein"
                     /protein_id="HAY9054086.1"
                     /translation="MFTAIIAVCILFIIGIIFARLYRRASAEQAFVRTGLGGQKVVMS
                     GGAIVMPIFHEIIPINMNTLKLEVSRSTIDSLITKDRMRVDVVVAFFVRVKPSVEGIA
                     TAAQTLGQRTLSPEDLRMLVEDKFVDALRATAAQMTMHELQDTRENFVQGVQNTVAED
                     LSKNGLELESVSLTNFNQTSKEHFNPNNAFDAEGLTKLIQETERRRRERNEVEQDVEV
                     AVREKNRDALSRKLEIEQQEAFMTLEQEQQVKTRTAEQNARIAAFEAERRREAEQTRI
                     LAERQIQETEIEREQAVRSRKVEAEREVRIKEIEQQQVTEIANQTKSIAIAAKSEQQS
                     QAEARANLALAEAVSAQQNVETTRQTAEADRAKQVALIAAAQDAETKAVELTVRAKAE
                     KEAAEMQAAAIVKLAEATRKKGLAEAEAQRALNDAINVLSDEQTSLKFKLALLQALPA
                     VIEKSVEPMKSIDGIKIIQVDGLNRGSAAGDANTGNVGGGNLAEQALSAALSYRTQAP
                     LIDSLLNEIGVSGGSLAALTSPLTSTTPVAENVE"
     gene            1871..1930
                     /locus_tag="JN001_002920"
     CDS             1871..1930
                     /locus_tag="JN001_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Ibs family toxin"
                     /protein_id="HAY9054087.1"
                     /translation="MMKLVIILIVLLLVSFAAY"
     gene            2247..2306
                     /gene="ibsE"
                     /locus_tag="JN001_002921"
     CDS             2247..2306
                     /gene="ibsE"
                     /locus_tag="JN001_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin IbsE"
                     /protein_id="HAY9054088.1"
                     /translation="MMKFVIILVVLLLLSFPTY"
     gene            complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="JN001_002922"
     CDS             complement(2426..3859)
                     /gene="hldE"
                     /locus_tag="JN001_002922"
                     /EC_number="2.7.1.167"
                     /EC_number="2.7.7.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     D-glycero-beta-D-manno-heptose-7-phosphate
                     kinase/D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase HldE"
                     /protein_id="HAY9054089.1"
                     /translation="MKVTLSEFERAGVMVVGDVMLDRYWYGPTSRISPEAPVPVVKVN
                     TIEERPGGAANVAMNIASLGANARLVGLTGIDDAARALSKSLADVNVKCDFVSVPTHP
                     TITKLRVLSRNQQLIRLDFEEGFEGVDPQPLHERINQALSSIGALVLSDYAKGALASV
                     QQMIQLARKAGVPVLIDPKGTDFERYRGATLLTPNLSEFEAVVGKCKTEEEIVERGMK
                     LIADYELSALLVTRSEQGMSLLQPGKAPLHMPTQAQEVYDVTGAGDTVIGVLAATLAA
                     GNSLEEACFFANAAAGVVVGKLGTSTVSPIELENAVRGRADTGFGVMTEEELKLAVAA
                     ARKRGEKVVMTNGVFDILHAGHVSYLANARKLGDRLIVAVNSDASTKRLKGDSRPVNP
                     LEQRMIVLGALEAVDWVVSFEEDTPQRLIAGILPDLLVKGGDYKPEEIAGSKEVWANG
                     GEVLVLNFEDGCSTTNIIKKIQQDKKG"
     gene            complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="JN001_002923"
     CDS             complement(3907..6747)
                     /gene="glnE"
                     /locus_tag="JN001_002923"
                     /EC_number="2.7.7.42"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamate--ammonia
                     ligase]-adenylyl-L-tyrosine
                     phosphorylase/[glutamate--ammonia-ligase]
                     adenylyltransferase"
                     /protein_id="HAY9054090.1"
                     /translation="MKPLSSPLQQYWQTVVERLPEPLAEKSLSAQAKSVLTFSDFVQD
                     SVIAHPEWLTELESQSPQADEWQHYAAWLQEALSNVSDEAGLMRELRLFRRRIMVRIA
                     WAQTLALVTEESILQQLSHLAETLIVAARDWLYDACCREWGTPCNAQGEAQPLLILGM
                     GKLGGGELNFSSDIDLIFAWPEHGCTQGGRRELDNAQFFTRMGQRLIKVLDQPTQDGF
                     VYRVDMRLRPFGESGPLVLSFAALEDYYQEQGRDWERYAMVKARIMGDSEGVYANELR
                     AMLRPFVFRRYIDFSVIQSLRNMKGMIAREVRRRGLTDNIKLGAGGIREIEFIVQVFQ
                     LIRGGREPSLQSRSLLPTLSVIAALHLLSENDAEQLRVAYLFLRRLENLLQSINDEQT
                     QTLPSDELNRARLAWAMDFADWPQLTGALTAHMTNVRRVFNELIGDDESETQEESLSE
                     QWRELWQDALQEDDTTPVLAHLSEDDRKQVLTLIADFRKELDKRTIGPRGRQVLDHLM
                     PHLLSDVCAREDAAVTLSRITALLVGIVTRTTYLELLSEFPAALKHLISLCAASPMIA
                     SQLARYPLLLDELLDPNTLYQPTATDAYRDELRQYLLRVPEDDEEQQLEALRQFKQAQ
                     LLRIAAADIAGTLPVMKVSDHLTWLAEAMIDAVVQQAWVQMVARYGKPNHLNDREGRG
                     FAVVGYGKLGGWELGYSSDLDLIFLHDCPMDAMTDGEREIDGRQFYLRLAQRIMHLFN
                     TRTSSGILYEVDARLRPSGAAGMLVTSAEAFADYQKNEAWTWEHQALVRARVVYGDPQ
                     LTAHFDAVRREIMMLPREGKTLQTEVREMREKMRAHLGNKHRNRFDIKADEGGITDIE
                     FITQYLVLRYAHEKPKLTRWSDNVRILELLAQNDIMEEQEAMALTRAYTTLRDELHHL
                     ALQELPGHVSEDCFTAERDLVRASWQKWLVEE"
     gene            complement(6770..8071)
                     /locus_tag="JN001_002924"
     CDS             complement(6770..8071)
                     /locus_tag="JN001_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic triphosphatase"
                     /protein_id="HAY9054091.1"
                     /translation="MAQEIELKFIVNHSAVEALRDHLNTLGGEHHDPVQLLNIYYETP
                     DNWLRGHDMGLRIRGENGRYEMTMKVAGRVTGGLHQRPEYNVALSEPTLDLAQLPTEV
                     WPNGELPADLASRVQPLFSTDFYREKWLVAVDDSRIEIALDQGEVKAGEFAEPICELE
                     LELLSGDTRAVLKLANQLVSQTGLRQGSLSKAARGYHLAQGNPAREIKPTTILHVAAK
                     ADVEQGLEAALELALAQWQYHEELWVRGNDAAKEQVLAAIGLVRHTLMLFGGIVPRKA
                     STHLRDLLTQCEATIASAVSAVTAVYSTKTAMAKLALTEWLVSKAWQPFLDAKAQSKM
                     SDSFKRFADIHLSRHAAELKSVFCQPLGDRYRDQLPRLTRDIDSILLLAGYYDPVVAQ
                     AWLENWQGLRHAIATGQRIEIEHFRNEANNQEPFWLHSGKR"
     gene            8313..8933
                     /locus_tag="JN001_002925"
     CDS             8313..8933
                     /locus_tag="JN001_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HAY9054092.1"
                     /translation="MPKLRLIGLTLLALSATAVSHAEETRYVSDELNTWVRSGPGDHY
                     RLVGTVNAGEEVTLLQTDANTNYAQVKDSSGRTAWIPLKQLSTEPSLRSRVPDLENQV
                     KTLTDKLTNIDNTWNQRTAEMQQKVAQSDSVINGLKEENQKLKNELIVAQKKVDAASV
                     QLDDKQRTIIMQWFMYGGGVLGLGLLLGLVLPHLIPTRKRKERWMN"
     gene            8997..10235
                     /gene="cca"
                     /locus_tag="JN001_002926"
     CDS             8997..10235
                     /gene="cca"
                     /locus_tag="JN001_002926"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fused tRNA nucleotidyltransferase/2',3'-cyclic
                     phosphodiesterase/2' nucleotidase/phosphatase Cca"
                     /protein_id="HAY9054093.1"
                     /translation="MKIYLVGGAVRDALLGLPVKDRDWVVVGSTPQEMLDAGYQQVGR
                     DFPVFLHPQTHEEYALARTERKSGSGYTGFTCYAAPDVTLEDDLKRRDLTINALAQDD
                     NGEIIDPYNGLGDLQNRLLRHVSPAFGEDPLRVLRVARFAARYAHLGFRIADETLTLM
                     REMTHAGELEHLTPERVWKETESALTTRNPQVFFQVLRDCGALRVLFPEIDALFGVPA
                     PARWHPEIDTGIHTLMTLSMAAMLSPQVDVRFATLCHDLGKGLTPPELWPRHHGHGPA
                     GVKLVEQLCQRLRVPNEIRDLARLVAEFHDLIHTFPMLNPKTIVKLFDSIDAWRKPQR
                     VEQLALTSEADVRGRTGFESADYPQGRWLREAWEVAQSVPTKAVVEAGFKGVEIREEL
                     TRRRIAAVASWKEQRCPKPD"
     gene            complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="JN001_002927"
     CDS             complement(10392..11213)
                     /gene="bacA"
                     /locus_tag="JN001_002927"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708867.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY9054094.1"
                     /translation="MSDMHSLLIAAILGVVEGLTEFLPVSSTGHMIIVGHLLGFEGDT
                     AKTFEVVIQLGSILAVVVMFWRRLFGLIGIHFGRPLQHEGESKGRLTLIHILLGMIPA
                     VVLGLLFHDTIKSLFNPINVMYALVVGGLLLIAAECLKPKEPRAPGLDDMTYRQAFMI
                     GCFQCLALWPGFSRSGATISGGMLMGVSRYAASEFSFLLAVPMMMGATALDLYKSWGF
                     LTTGDIPMFAVGFITAFVVALIAIKTFLQLIKRISFIPFAIYRFIVAAAVYVVFF"
     gene            complement(11304..11672)
                     /gene="folB"
                     /locus_tag="JN001_002928"
     CDS             complement(11304..11672)
                     /gene="folB"
                     /locus_tag="JN001_002928"
                     /EC_number="4.1.2.25"
                     /EC_number="5.1.99.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708868.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional dihydroneopterin
                     aldolase/7,8-dihydroneopterin epimerase"
                     /protein_id="HAY9054095.1"
                     /translation="MDIVFIEQLSVITTIGVYDWEQTIEQKLVFDIEMAWDNRKAAKS
                     DDVADCLSYADIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKPGAV
                     ARAANVGVIIERGNNLKENN"
     gene            11777..12394
                     /gene="plsY"
                     /locus_tag="JN001_002929"
     CDS             11777..12394
                     /gene="plsY"
                     /locus_tag="JN001_002929"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HAY9054096.1"
                     /translation="MSAIAPGMILIAYLCGSISSAILVCRLCGLPDPRTSGSGNPGAT
                     NVLRIGGKGAAVAVLIFDVLKGMLPVWGAYELGVSPFWLGLIAIAACLGHIWPVFFGF
                     KGGKGVATAFGAIAPIGWDLTGVMAGTWLLTVLLSGYSSLGAIVSALIAPFYVWWFKP
                     QFTFPVSMLSCLILLRHHDNIQRLWRRQETKIWTKFKRKREKDPE"
     gene            complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="JN001_002930"
                     /gene_synonym="dan"
     CDS             complement(12407..>13092)
                     /gene="ttdR"
                     /locus_tag="JN001_002930"
                     /gene_synonym="dan"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA-binding transcriptional activator TtdR"
                     /protein_id="HAY9054097.1"
                     /translation="VDDVTQIKTRPEGMIRIGCSFGFGRSHIAPAITELMRNYPELQV
                     HFELFDRQIDLVQDNIDLDIRINDEIPDYYIAHLLTKNKRILCAAPEYLQKYPQPQSL
                     QELSRHDCLVTKERDMTHGIWELGNGQEKKSVKVSGHLSSNSGEIVLQWALEGKGIML
                     RSEWDVLPFLESGKLVQVLPEYAQSANIWAVYREPLYRSMKLRVCVEFLAAWCQQRLG
                     KPDEGYQVM"
BASE COUNT         3164 a         3681 c         3282 g         2965 t
ORIGIN      
        1 tggatgttta ccgcgattat tgccgtatgc attctgttta ttattggaat tattttcgcc
       61 aggctctatc gtcgcgcttc ggcagagcaa gcttttgttc gtactggttt aggtgggcaa
      121 aaagtggtga tgagcggtgg cgcaatcgtg atgccgatct ttcatgaaat aatccccatc
      181 aatatgaata ctctgaagct ggaagtcagc cgctcaacca ttgatagcct gattacgaaa
      241 gatcgtatgc gtgtcgatgt agtagtcgct ttctttgtac gggtaaaacc gtctgtagaa
      301 ggcatcgcca ctgcggcgca gacgttgggg caacgcacgc tatcaccaga agacttacgt
      361 atgttggttg aagataaatt tgtcgatgcc ctccgtgcaa cagctgcaca aatgaccatg
      421 catgagttac aggatacccg cgagaacttc gtgcagggag tacaaaatac tgtcgcagaa
      481 gacctgtcga aaaacggtct tgagctggaa agcgtttcac ttaccaactt taaccagacc
      541 tcgaaagaac atttcaatcc gaacaatgcc tttgacgccg aaggtttaac caaactgatt
      601 caggagacgg agcgccgtcg tcgcgaacgt aacgaagttg aacaggatgt agaagttgcg
      661 gtgcgtgaga aaaaccgtga tgcactttcg cgcaagttgg agattgaaca acaagaagcg
      721 tttatgacgc ttgagcagga gcagcaggtt aaaacccgta ctgccgaaca gaatgcacgt
      781 attgcggctt ttgaagctga acgtcgtcgt gaagcagagc agacgcgaat tctggctgaa
      841 cgacaaattc aggaaacgga gatcgagcgc gagcaggccg tccgctcaag aaaggttgag
      901 gctgaacgtg aagttcgtat taaagagatc gaacagcagc aggtcaccga aatcgccaac
      961 cagacgaaat cgatcgctat tgccgccaaa tcggaacaac agtcccaggc agaagcgcgt
     1021 gctaaccttg cactcgcaga agcagtaagt gcgcaacaaa acgtagaaac cactcgacag
     1081 accgcagaag ccgatcgtgc taaacaagtt gccctaatcg ctgccgcgca ggatgcagaa
     1141 accaaagcgg ttgaactgac cgtgcgggcg aaagcagaaa aagaagccgc agagatgcag
     1201 gcggcggcta tcgttaagtt agccgaagct acacgtaaaa agggtctggc ggaagcagaa
     1261 gcacaacgtg cgctgaacga tgctatcaac gtactttctg atgaacaaac cagccttaaa
     1321 ttcaaactgg ccttgttgca ggcgctacct gcggtaatag aaaaatccgt tgagccgatg
     1381 aaatctattg acggtatcaa gattattcag gtcgatggtc tgaatcgtgg cagcgctgcg
     1441 ggtgatgcaa acacgggtaa tgtggggggc ggaaacctgg cggaacaagc attatcagcc
     1501 gctctctctt accgcacaca ggcaccgctg attgactcct tgctcaatga aattggcgtt
     1561 tcaggcggct cactggcggc attgacttca cccttaacct caacaactcc cgtcgccgaa
     1621 aacgtagaat aaattttcag ctatgaacgt ccctggcaca aaaagccggg gattttttat
     1681 atctgcgttc cgctaaaaac tgcaaatgat caggtcgttg caacgttttg cgtgaccgct
     1741 cggggaaggc aaaactgcct ctgggaaagc gttgcgcgag gtccggcgct catcaacaat
     1801 cggggagtca gcaaagggct gaaacgggaa agcccctccc gaggaagggg ccttacagaa
     1861 ggaaagggtt atgatgaagc tcgtcatcat actgattgtg ttgttactcg taagtttcgc
     1921 agcttattaa cagccaatca gaggggggag aaatcctccc tcacccttgt tcctttactt
     1981 taggttgaaa aaaaatcagc gtcaagaagg tttcattaac acatatccct agcccaaaaa
     2041 gccggggatt ttttatatct gcgttccgct aaaaggtgca aatgctcagg acgttgcagc
     2101 gttttgcgtg accgctcggg gaaggcaaaa ctgcttcagg gaaagcgttg cgcggggtcc
     2161 ggcgctcatc aacaatcggg gagtcagcaa ggggctgaaa cgggaaagcc cctcccgagg
     2221 aaggggcctt atagaaggaa agggttatga tgaagttcgt catcatactg gttgtgttgt
     2281 tactgttaag tttcccgact tactaacaac tgatcagagg ggggagaaat cctcccttac
     2341 ccttgttcct ttactttagg ttgaaaaaac aacagcgtca ataggcctgc ctgctacgaa
     2401 gcgagatctg tgaaccgctt tccggttagc cttttttatc ctgttggatc ttcttgatga
     2461 tgttagtggt cgagcaaccg tcttcgaagt tgagcaccag cacttcgccg ccgttggccc
     2521 agacttcttt actaccggcg atctcttctg gtttatagtc gccgcccttc accagtaaat
     2581 ctggcaggat cccggcgatc aagcgctgcg gcgtgtcttc ttcaaacgac accacccagt
     2641 cgaccgcttc cagtgcgccc agcacaatca tacgctgttc gagcgggtta acggggcggg
     2701 aatccccttt cagccgtttg gtggaggcat cgctgttcac agcgacaatc agacggtcac
     2761 ccagtttgcg agcatttgcc agataggaga cgtgcccggc atgcaggatg tcaaagacac
     2821 cgttggtcat taccaccttt tcgccgcgtt tacgcgctgc cgctacggcc agcttcagtt
     2881 cctcttcggt catcacgcca aagccggtat ctgcgcgccc acgcactgca ttttccagct
     2941 cgatcggcga aaccgtggag gttcccagtt tgccgaccac cacgccagcc gccgcattgg
     3001 caaagaagca ggcttcttcc agcgaattac ccgctgccag cgttgccgcc aggacgccaa
     3061 tcaccgtgtc gcccgcaccg gtaacgtcat acacttcctg cgcctgggtt ggcatatgca
     3121 gcggcgcttt acccggttgc agcagcgaca taccctgttc ggaacgggtc actaacagag
     3181 ccgagagttc gtaatcggca atcagtttca tgccgcgctc aacaatctct tcttcggtct
     3241 tacatttacc gacaacagct tcaaattccg agagattcgg cgttaacagc gtagcgccgc
     3301 ggtagcgctc aaaatcggta ccttttggat caatcagcac cggaacgccc gctttacgcg
     3361 ccagttggat catctgctgt acgcttgcca gcgcaccttt ggcgtagtca gaaagcacca
     3421 gcgcgccaat cgaactcagc gcctgattaa tccgctcgtg cagcggctgc ggatcaacgc
     3481 cttcgaaacc ttcttcgaaa tccagacgga tcagctgttg gttgcgggaa agtacccgta
     3541 atttggtgat ggtcggatgc gtcggtacag aaacgaagtc gcatttgacg ttgacgtcgg
     3601 ccagagattt actcagcgcg cgcgctgcat cgtcaatgcc cgtcaacccg accaggcgtg
     3661 cattagcacc gagagaagcg atattcatcg ccacgttagc cgcgccgccc ggacgttctt
     3721 cgatggtatt cactttaacc acgggcaccg gcgcttccgg cgagatacgg ctggtgggac
     3781 cgtaccagta acgatccagc attacatcac caaccaccat cactcctgca cgttcaaact
     3841 ctgacagcgt tactttcatt cctgtctcct gagagattca aaatttgcgc gcgataatac
     3901 catacttcat tcttccacca gccacttctg ccagcttgcc cgcaccagat cacgctctgc
     3961 ggtgaagcaa tcctccgaca catggcccgg caattcctgt aatgccagat gatgaagttc
     4021 atcgcgcagc gtcgtgtaag cacgggtcag cgccatcgct tcctgctctt ccataatgtc
     4081 gttttgcgcc agcagctcca gaatacgcac gttgtctgac cagcgcgtta acttcggttt
     4141 ttcatgagcg tagcgcaaca ccagatattg ggtaataaat tcgatatcgg taattccgcc
     4201 ttcatcggct ttgatatcaa agcgattacg atgtttattg ccgagatgag cgcgcatttt
     4261 ctcgcgcatt tcccgcactt ccgtttgcag agttttacct tcacgcggca gcatcataat
     4321 ctcgcgacgc actgcgtcaa agtgcgcggt gagctgcgga tcgccgtaca ctacacgcgc
     4381 acgcaccagc gcctgatgct cccacgtcca ggcctcgttt ttctgataat cagcaaatgc
     4441 ttctgcggat gtcaccagca ttcccgccgc cccggacgga cgcagtcgtg catccacttc
     4501 atacaaaatg ccggaagagg ttcgcgtatt gaacagatgc ataatgcgtt gcgccagacg
     4561 cagataaaac tgtcgcccgt cgatttcccg ctcgccgtca gtcatcgcat ccattgggca
     4621 atcatggagg aagatcaggt caagatcgga actgtagcct aactcccagc cgcccagctt
     4681 gccgtagccg accaccgcaa aaccacggcc ttcgcgatcg ttgaggtgat ttggcttacc
     4741 gtagcgggcc accatttgaa cccacgcctg ctgaacgacg gcatctatca tagcctctgc
     4801 cagccaggtt aagtgatcgc tcactttcat caccggtagc gtaccagcga tatccgctgc
     4861 ggcgatgcgt aacagctgcg cctgtttgaa ctgacgcagc gcctcaagct gttgctcttc
     4921 gtcatcttcc ggcacgcgca gcaaatactg gcgcaactca tcgcggtagg catcggtcgc
     4981 cgtcggctgg taaagagtgt ttggatcgag caattcatcc agcaataatg gataacgcgc
     5041 cagctggctg gcaatcatcg gcgatgcggc acacagagaa atcaaatgtt taagcgccgc
     5101 agggaattca ctgagcaatt ctaaataggt ggtgcgggta acaatcccca ccagcaaggc
     5161 ggtaatgcgc gacagcgtaa cggcagcgtc ttcacgcgca cagacatcac ttagcagatg
     5221 tggcatcaga tggtcgagca cctgacgtcc tcgcggcccg atagtacgct tatccagctc
     5281 tttgcggaaa tcagcaatca gcgttaggac ctgtttgcga tcatcctcgc taagatgcgc
     5341 cagcactggc gtagtgtcat cttcctgcaa cgcatcctgc cacagctcac gccactgttc
     5401 cgacagcgac tcttcctgag tttcactttc gtcgtcgcca atcaattcat taaacacccg
     5461 gcgcacattg gtcatatgtg cggtcagcgc cccggtcagt tgcggccagt cagcaaagtc
     5521 catcgcccac gccagccgcg cacggttaag ctcatcagaa ggaagcgttt gggtttgttc
     5581 gtcgttaatg ctttgcagca ggttttccag acgccgcagg aacagatatg ccactcgcaa
     5641 ttgttcagca tcgttttcag aaagcagatg cagcgcggca atgacgctga gcgttggcag
     5701 taaagagcgc gactgcagcg acggttcgcg cccaccgcga atgagctgga acacctgaac
     5761 gataaattca atttcgcgaa tgccgcctgc gccgagtttg atattgtcgg tcaaaccacg
     5821 tcgacgcact tcacgggcaa tcatcccttt catgttgcgc agcgactgaa tcacgctgaa
     5881 atcgatgtaa cgacggaaaa caaacgggcg cagcatcgca cgcaactcgt tagcatagac
     5941 gccttcgcta tcgcccataa tccgcgcctt gaccatcgcg taacgctccc agtcgcgccc
     6001 ctgctcctgg taataatcct ccaacgcggc aaagctcagc accagcgggc cactttcgcc
     6061 aaacggacgc agccgcatat ccacgcgata gacgaagcca tcctgcgttg gttgatccaa
     6121 cactttaatc agccgctgcc ccatgcgggt aaaaaactgc gcgttatcca gttcccggcg
     6181 tccgccctgc gtacaaccat gttccggcca ggcaaaaatc agatcgatat ctgaggagaa
     6241 attcagttcc ccaccgccca gcttacccat gcctaaaatc agcagcggtt gcgcttcgcc
     6301 ctgcgcattg cacggcgttc cccactcgcg gcagcaagcg tcatacagcc agtcacgcgc
     6361 ggcgacaatc agcgtctccg ccagatggct gagctgctgc aatatgctct cttcagtaac
     6421 caaagccagc gtttgcgccc aggcgatgcg caccataatg cgccgccgga atagccgcag
     6481 ctcgcgcatt aacccggctt cgtcactcac attgctgagc gcctcctgca accatgccgc
     6541 gtaatgctgc cattcatcag cctgcggcga ttggctttcc agttccgtca gccactctgg
     6601 atgcgcaatc acgctgtcct gcacaaaatc actgaaagta agtactgact tcgcctgtgc
     6661 gctaagtgat ttctcggcta aaggctctgg cagccgctca acaacggtct gccagtactg
     6721 ctgtaacggt gaagagagcg gcttcataag cgattttatc cttgcctgat taacgttttc
     6781 cgctgtgcaa ccagaacggt tcctgattgt ttgcctcatt acggaaatgt tcaatttcaa
     6841 tgcgttgccc ggtcgcaata gcgtgacgca gcccctgcca gttctccagc caggcttgcg
     6901 cgacgacagg atcatagtaa cccgccagca acagtattga gtcaatatca cgcgtcagac
     6961 gtggcaactg gtcacggtag cgatcgccca acggctggca gaaaacgctt ttcagttcag
     7021 cggcatggcg ggaaagatgg atatcggcaa agcgtttgaa ggaatcgctc attttactct
     7081 gcgctttggc atctaaaaac ggctgccagg ctttgcttac cagccattcg gtcaacgcca
     7141 gcttcgccat tgccgttttg gtagagtaga ccgccgtcac ggcagaaacc gcagaagcga
     7201 tggtcgcttc gcattgagtc agcaaatcgc gtaagtgagt gctcgctttg cgcggcacaa
     7261 taccaccgaa cagcatcagt gtatgacgga ccagaccaat ggctgccagc acctgttctt
     7321 tcgccgcatc gttgccgcgt acccacagtt cttcatgata ctgccattgc gctaacgcca
     7381 gctcgagcgc cgcttccagc ccctgttcca catcggcttt tgccgcaaca tgcaaaatgg
     7441 tggtcggttt gatttcacgc gccggattgc cctgcgccag atgatagcca cgcgccgctt
     7501 tgctcaggct gccctggcgt aatccggttt gcgataccag ttggttcgcc agtttcagca
     7561 ccgcgcgcgt gtcgccgcta agcagttcca gttccagctc acagataggt tcagcaaatt
     7621 cccccgcttt cacctccccc tgatcgagag cgatttcaat tcggctgtca tcgaccgcca
     7681 ccagccattt ttcgcgataa aaatcggtgc tgaacagcgg ttgtacgcgg gaagcgagat
     7741 cggcgggcaa ttcgccgttc ggccagactt ccgtcggtaa ctgcgccagg tcgagcgtcg
     7801 gttcgctcaa cgccacgtta tattccgggc gctggtgtaa gccgcctgtc actcttcctg
     7861 caactttcat ggtcatctca tagcgaccgt tttcgccacg aatacgtaag cccatatcgt
     7921 gcccacgcag ccagttatcc ggcgtttcgt agtaaatatt cagcaactgc acggggtcat
     7981 ggtgctcgcc gcccagcgta ttgagatggt cacgcaacgc ctcaacggca ctgtgattaa
     8041 caataaactt taattcgatt tcctgagcca tggcctttac ttatcggtta tgtcacataa
     8101 gtgacgatga acggcgaact taatgcgatc ttttttgtca gtagatagta ttttgcgcca
     8161 aattgccatg caacgggcaa tttgacgggc gtaaaagttt gaagcagtgg caagacctga
     8221 cacagaggat tccgattgat gtcgaatgct ttgcgtagcg acactgatgc cactactatc
     8281 gttccacttt ccatgacaat aacgacagcc tgatgccaaa attacgcctg atcggattaa
     8341 ctttactcgc acttagcgcc actgccgtct cacacgctga agaaacgcgc tatgtttctg
     8401 atgaactgaa tacctgggtc cgtagcggtc cgggagatca ttatcgcctc gtgggcacgg
     8461 ttaacgccgg cgaggaagtg accttattac aaactgacgc caacaccaat tatgcccagg
     8521 tgaaagacag ctctggccgt accgcctgga tcccgttgaa acaacttagc actgagccaa
     8581 gcctgcgctc ccgtgtgcca gatctggaaa atcaggtcaa aaccctgacc gataaactca
     8641 ccaatatcga taacacctgg aatcagcgca ccgcagaaat gcagcaaaaa gtggcgcaga
     8701 gcgacagcgt gatcaacgga ttaaaagaag aaaatcagaa attgaaaaac gagctgattg
     8761 tcgcgcagaa aaaggtcgat gccgccagcg tacagctgga tgacaaacag cgcaccatca
     8821 tcatgcaatg gtttatgtat ggcggtggcg tgctggggct tggcttgctg ctcggtctgg
     8881 tactgccaca cctgatccca acgcgcaaac gcaaagagcg ctggatgaac taaatcgcct
     8941 tcttcgttgc actgtcttat tattaggaat tgtgtatttg acgaagggat gatggcgtga
     9001 agatttatct ggtcggtggt gctgttcggg atgcattgtt agggctaccg gtcaaagaca
     9061 gagattgggt ggtggtcggc agtacgccac aggagatgct cgacgcgggc taccagcagg
     9121 taggccgcga ttttcctgtg tttctgcatc cgcaaacgca tgaagagtat gcgctggcac
     9181 gtaccgaacg gaaatccggt tccggttaca ccggttttac ttgctatgcc gcaccggatg
     9241 tcacgctgga agatgatctt aagcgtcgcg atctgaccat taatgcgctg gcccaggacg
     9301 ataacggcga gattatcgac ccgtacaacg gtctgggcga tctgcaaaat cgtctgttgc
     9361 gccatgtttc ccccgctttt ggcgaagatc cgttacgcgt tctgcgcgtg gcgcgttttg
     9421 ctgcgcgtta tgcccacctc ggttttcgta ttgccgatga aactctgacg ctgatgcgcg
     9481 agatgaccca tgcgggtgaa ctggaacacc tgacgcctga acgggtatgg aaagagacgg
     9541 aaagcgccct caccacccgc aatccccagg tgttcttcca ggtactgcgc gattgcggtg
     9601 cacttcgcgt tttattcccg gaaattgacg ccctgtttgg cgttccggcc cctgccaggt
     9661 ggcatccgga aatcgacacc ggtattcata ccttaatgac gctctcaatg gcggcgatgc
     9721 tgagtccgca ggttgatgtc cgtttcgcaa ctttatgcca cgatctcggt aaaggactga
     9781 cgccgccaga actttggccg cgtcatcatg ggcatggccc ggcgggtgtt aagttagtgg
     9841 aacaactatg ccagcgtctg cgcgtgccaa atgaaattcg cgatttagcc agactggtgg
     9901 ctgagtttca cgatctcatc cacaccttcc caatgctgaa cccaaaaacc atcgtcaaat
     9961 tatttgattc catcgatgcc tggcgtaaac cgcagcgtgt cgagcaactg gcgctgacca
    10021 gcgaggctga cgtacgcggc agaaccggtt ttgaatcagc ggactacccg caaggccgtt
    10081 ggttgcgcga agcctgggaa gtggcgcagt cagtgccgac aaaagcggtc gttgaagcgg
    10141 gatttaaagg tgtggagatt cgcgaggagc tgacccgacg gcggattgcg gcggtagcca
    10201 gttggaagga acaacgttgc ccaaagcctg actgagtata aaactaaacg ttaacacgaa
    10261 ccatcccctc gccccttcgg ggagagggtg aggggaacag accagcaccg gtgcgaacaa
    10321 tcacccccac cccggccctc tccctacaga gcgagggaga aaaccaggcc tgctcccgaa
    10381 ccttttctca atcaaaagaa cacgacgtac accgcagccg ccacaataaa gcgataaatg
    10441 gcgaacggga taaacgaaat gcgcttaatc aattgcagga aggttttaat cgctatcagc
    10501 gccaccacaa aagcggtgat aaacccaacg gcaaacatcg ggatatcgcc ggttgtcagg
    10561 aagccccagc ttttgtagag atcgagcgcc gttgcgccca tcatcatcgg taccgccagc
    10621 aggaacgaga actcggaagc agcgtaacgg ctcacgccca tcagcatccc acctgaaatg
    10681 gtggccccgg aacgggagaa acccggccac agcgccagac actggaaaca gccaatcata
    10741 aacgcctgac gataggtcat atcatcaaga cccggcgcac gcggctcttt cggcttcagg
    10801 cattcggcgg caatcagcaa caaaccgcca acgaccagtg catacatcac atttatcggg
    10861 ttaaacaatg acttaatcgt gtcgtggaac aacagcccca gtaccaccgc cggaatcatc
    10921 cccagcaaaa tgtggatcag cgttaaacga cctttgcttt ctccttcgtg ctgcaacggg
    10981 cggccaaagt ggatgccaat caggccaaac agacgccgcc agaacatcac tactaccgcc
    11041 agaattgatc ctaactggat cacaacttca aaggttttcg ccgtgtcgcc ctcgaacccc
    11101 aacaagtgac cgacaataat catatggccc gtgctggata ccggcagaaa ttctgtcaat
    11161 ccttcgacca cacccaatat tgccgctatc agcagcgagt gcatatcgct catcaataaa
    11221 cccctaaatt attaaaatgt accgcttgtc cggactactg cagtaagacc aggttataac
    11281 cgtttggttt aacagctgta aaattaatta ttttctttca gattattgcc acgctcaatg
    11341 attacaccaa cattcgccgc ccgcgccact gcgcctggct tgctgagttt gatgcgcacc
    11401 cacggcgagt tgaagcgtgc taacagcagc tccgccacct cttcagccac gcgttccacc
    11461 agcgcaaaac gcgccccctc gacgtggctg accaccgttt ctgcaatgtc agcgtaactg
    11521 aggcaatccg ccacatcatc acttttcgcc gctttacggt tatcccatgc catttcgata
    11581 tcgaacacta acttctgttc gatggtctgt tcccagtcgt aaacaccaat agtggtgatt
    11641 accgaaagtt gctctataaa tacaatatcc atcacgtcct gcctgctttt tggctaaccg
    11701 gataccactt ccggcgaaat gtgcgtatta tccacagatt catcgttgaa cacgaatttt
    11761 caaaacggaa cagcttatga gtgcaatcgc gcctggaatg atcctcatcg cgtacctctg
    11821 cggctccatt tccagtgcca ttctggtttg ccgcttgtgt gggctgcccg atccgcgaac
    11881 cagcggctcc ggcaatccag gcgcaaccaa tgtgttacgt atcggtggca agggagcagc
    11941 cgtagcagta ctgattttcg acgttctgaa aggaatgttg cccgtctggg gcgcgtatga
    12001 attaggtgtc agccccttct ggctaggctt aattgccatc gccgcctgtc ttggacacat
    12061 ctggcccgtt ttcttcggat ttaaaggagg aaaaggcgtt gctaccgctt ttggtgccat
    12121 cgcacccatt ggctgggatc tcaccggagt aatggcggga acctggttac tgaccgtgct
    12181 attgagcgga tactcgtcgc tgggagcgat tgtcagtgca ctgattgctc cgttttatgt
    12241 ctggtggttt aagccacaat tcaccttccc agtttcgatg ctctcttgcc tgatcctgct
    12301 gcgtcatcat gacaacatcc agcgtctgtg gcgtcgtcag gagacaaaaa tctggacgaa
    12361 attcaaaaga aagcgcgaaa aggatcccga gtgatttctg gtggatctac atgacctgat
    12421 agccttcatc gggcttgccc agccgttgct ggcaccatgc cgccagaaat tccacgcaga
    12481 cacgtaattt catgctgcga tagagcggct cccggtaaac agcccagata ttggcgcttt
    12541 gtgcatactc cggcaatact tgcaccagtt tgccactctc cagaaacggc aacacatccc
    12601 actcggaacg cagcataatc cctttgccct ccagcgccca ttgcaacact atctcgccgc
    12661 tattggagga aagatgcccg ctaaccttca ccgatttttt ctcctgaccg ttccccaact
    12721 cccatattcc gtgggtcata tcgcgctctt tggtcaccag acagtcatga cgacttaatt
    12781 cctgtaatga ttgtggctgc ggatattttt gcagatactc aggtgctgcg cataatattc
    12841 ttttattttt cgttaacaga tgcgcaatat aataatcagg aatttcgtca ttaatacgaa
    12901 tatccagatc aatattatcc tgcactaaat caatttgccg atcgaacaat tcaaaatgca
    12961 cctgtaactc aggataattg cgcataagtt cggtaatggc tggcgcaata tggctgcgcc
    13021 caaaaccaaa actgcaacca atacgaatca tcccctccgg gcgcgttttg atttgcgtga
    13081 cgtcatcgac ca
//
LOCUS       DADMJE010000116        12988 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.117, whole genome shotgun sequence.
ACCESSION   DADMJE010000116 DADMJE010000000
VERSION     DADMJE010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12988)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12988)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12988
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.117"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(14..520)
                     /gene="mug"
                     /locus_tag="JN001_002931"
     CDS             complement(14..520)
                     /gene="mug"
                     /locus_tag="JN001_002931"
                     /EC_number="3.2.2.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="G/U mismatch-specific DNA glycosylase"
                     /protein_id="HAY9054098.1"
                     /translation="MVEDILAPGLRVVFCGINPGLSSAGTGFPFAHPANRFWKVIYQA
                     GFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQANEVSKQELHAGGRKLIEKIEDYQPQ
                     ALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVSLEKLVEAYRELD
                     QALVVRGR"
     gene            645..720
                     /locus_tag="JN001_002932"
     tRNA            645..720
                     /locus_tag="JN001_002932"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:678..680,aa:Ile,seq:cat)
     gene            complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JN001_002933"
     CDS             complement(774..1538)
                     /gene="nfeF"
                     /locus_tag="JN001_002933"
                     /EC_number="1.16.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent ferric chelate reductase"
                     /protein_id="HAY9054099.1"
                     /translation="MNNSPRYPQRVRNDLRFRELTVLRVERISAGFQRIVLGGEALDG
                     FTSRGFDDHSKLFFPQPDAHFVPPTVTEEGIVWPEGPRPPSRDYTPLYDELRHELAID
                     FFIHDGGVASGWAMQAQPGDKLTVAGPRGSLVVPEDYAYQLYVCDESGMPALRRRLET
                     LSKLAVKPQVSALVSVRDNACQDYLAHLDGFNIEWLAHDEQAVDARLAQMQIPADDYF
                     IWITGEGKVVKNLSRRFEAEQYDPQRVRAAAYWHAK"
     gene            1826..2449
                     /locus_tag="JN001_002934"
     CDS             1826..2449
                     /locus_tag="JN001_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HAY9054100.1"
                     /translation="MSHHHEGCCKHEGQPRHEGCCKGEKSEHEHCGHGHQHEHGQCCG
                     GRHGRGGGRRQRFFGHGELRLVILDILSRDDSHGYELIKAIENLTQGNYTPSPGVIYP
                     TLDFLQEQSLITIREEEGGKKQIALTEQGAQWLEENREQVEMIEERIKARCVGAALRQ
                     NPQMKRALDNFKAVLDLRVNQSDISDAQIKKIIAVIDRAAFDITQLD"
     gene            complement(2603..4123)
                     /locus_tag="JN001_002935"
     CDS             complement(2603..4123)
                     /locus_tag="JN001_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311981.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HAY9054101.1"
                     /translation="MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGFT
                     LQELQRQPHNMVRHPDMPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPM
                     VREGKISGYMSIRTRATDEEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLP
                     LRWRARGVMTLMFILLAAMLWFVAAPVVTYFLCVLVVLLASACFEWQIVRPIENVARQ
                     ALKVATGERNSVEHLNRSDELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAK
                     GTDELNEHTQQTVDNVQQTVATMNQMAASVKQNSATASAADKLSIIASNAAVQGGEAM
                     TTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGE
                     VRHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQIS
                     HSTLEQADGLSSLTRAVDELNLITQKNAELVEESAQVSAMVKHRASRLEDAVTVLH"
     gene            4429..5919
                     /gene="ygjG"
                     /locus_tag="JN001_002936"
     CDS             4429..5919
                     /gene="ygjG"
                     /locus_tag="JN001_002936"
                     /EC_number="2.6.1.82"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine aminotransferase"
                     /protein_id="HAY9054102.1"
                     /translation="MITTFVFIPIFAIAAGVAQSLQYLNRYHVIREPPEHILNRLPSS
                     ASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGA
                     VEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLD
                     PLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFH
                     GKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEP
                     IQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILC
                     LAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGCNPLACAAALATINVLLEQNL
                     LAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRV
                     LVAGTLNNAKTIRIEPPQTLTIEQCELVIKAARKALAAMRVSVEEA"
     gene            complement(5961..6293)
                     /locus_tag="JN001_002937"
     CDS             complement(5961..6293)
                     /locus_tag="JN001_002937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-binding protein"
                     /protein_id="HAY9054103.1"
                     /translation="METVAYADFARLEMRVGKIVEVKRHENADKLYIVQVDVGEKTLQ
                     TVTSLVPYYSEEELMGKTVVVLCNLQKAKMRGETSECMLLCAETDDGSESVLLTPERM
                     MPAGVRVV"
     gene            6512..7495
                     /gene="ebgR"
                     /locus_tag="JN001_002938"
     CDS             6512..7495
                     /gene="ebgR"
                     /locus_tag="JN001_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator EbgR"
                     /protein_id="HAY9054104.1"
                     /translation="MATLKDIAIEAGVSLATVSRVLNDDPTLNVKEETKHRILEIAEK
                     LEYKTSSARKLQTGAVNQHHILAIYSYQQELEINDPYYLAIRHGIETQCEKLGIELTN
                     CYEHSGLPDIKNVTGILIVGKPTPALRAAACALTDNICFIDFHEPGSGYDAVDIDLAR
                     ISKEIIDFYINQGVNRIGFIGGEDEPGKADIREVAFAEYGRLKQVVREEDIWRGGFSS
                     SSGYELAKQMLAQEDYPKALFVASDSIAIGVLRAIHERGLNIPQDISLISVNDIPTAR
                     FTFPPLSTVRIHSEMMGSQGVNLVYEKARDGRALPLLVFVPSKLKLRGTTR"
     gene            7679..10771
                     /gene="ebgA"
                     /locus_tag="JN001_002939"
     CDS             7679..10771
                     /gene="ebgA"
                     /locus_tag="JN001_002939"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit alpha"
                     /protein_id="HAY9054105.1"
                     /translation="MNRWENIQLTHENRLAPRAYFFSYDSVAQARTFARETSSLFLPL
                     SGQWNFHFFDHPLQVPEAFTSELMADWGHITVPAMWQMEGHGKLQYTDEGFPFPIDVP
                     FVPSDNPTGAYQRIFTLSDGWQGKQTLIKFDGVETYFEVYVNGQYVGFSKGSRLTAEF
                     DISAMVKTGDNLLCVRVMQWADSTYVEDQDMWWSAGIFRDVYLVGKHLTHINDFTVRT
                     DFDEAYCDATLSCEVVLENLAASPVVTTLEYTLFDGERVVHSSAIDHLAIEKLTSASF
                     AFTVEQPQQWSAESPYLYHLVMTLKDANGNVLEVVPQRVGFRDIKVRDGLFWINNRYV
                     MLHGVNRHDNDHRKGRAVGMDRVEKDLQLMKQHNINSVRTAHYPNDPRFYELCDIYGL
                     FVMAETDVESHGFANVGDISRITDDPQWEKVYVERIVRHIHAQKNHPSIIIWSLGNES
                     GYGCNIRAMYHAAKALDDTRLVHYEEDRDAEVVDIISTMYTRVPLMNEFGEYPHPKPR
                     IICEYAHAMGNGPGGLTEYQNVFYKHDCIQGHYVWEWCDHGIQAQDDHGNVWYKFGGD
                     YGDYPNNYNFCLDGLIYSDQTPGPGLKEYKQVIAPVKIHARDLTRGELKVENKLWFTT
                     LDDYTLHAEVRAEGETLATQQIKLRDVAPNSEAPLQITLPQLDAREAFLNITVTKDSR
                     TRYSEAGHSIATYQFPLKENTAQPVPFAPNNARPLTLEDDRLSCTVRGYNFAITFSKM
                     SGKPTSWQVNGESLLTREPKINFFKPMIDNHKQEYEGLWQPNHLQIMQEHLRDFAVEQ
                     SDGEVLIISRTVIAPPVFDFGMRCTYIWRIAADGQVNVALSGERYGDYPHIIPCIGFT
                     MGINGEYDQVAYYGRGPGENYADSQQANIIDIWRSTVDAMFENYPFPQNNGNRQHVRW
                     TALTNRHGNGLLVVPQRPINFSAWHYTQENIHAAQHCNELQRSDDITLNLDHQLLGLG
                     SNSWGSEVLDSWRVWFRDFSYGFTLLPVSGGEATAQSLASYEFGAGFFSTNLHSENKQ
                     "
     gene            10768..11217
                     /locus_tag="JN001_002940"
     CDS             10768..11217
                     /locus_tag="JN001_002940"
                     /EC_number="3.2.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-galactosidase subunit beta"
                     /protein_id="HAY9054106.1"
                     /translation="MRIIDNLEQFRQIYASSKKWQRCVEAIENIDNIQPGVAHSIGDS
                     LTYRVETDSATDALFTGHRRYFEVHYYLQGQQKIEYAPKETLQVVEYYRDETDREYLK
                     GCGETVEVHEGQIVICDIHEAYRFICNNAVKKVVLKVTIEDGYFHNK"
     gene            11280..12713
                     /locus_tag="JN001_002941"
     CDS             11280..12713
                     /locus_tag="JN001_002941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9054107.1"
                     /translation="MSDTKRNTIGKFGLLSLTFAAVYSFNNVINNNIELGLASAPMFF
                     LATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVKSSLGGRWAFITAYTYWFVNLFFFTS
                     LLPRVIAYASYAFLGYEYIMTPVATTIISMVLFAFSTWVSTNGAKMLGPITSVTSTLM
                     LLLTLSYILLAGTALVGGVQPADPITVDAMIPNFNWAFLGVTTWIFMAAGGAESVAVY
                     VNDVKGGSKSFVKVIILAGIFIGVLYSVSSVLINVFVSSKELKFTGGSVQVFHGMAAY
                     FGLPEALMNRFVGLVSFTAMFGSLLMWTATPVKIFFSEIPEGIFGKKTVELNENGVPA
                     RAAWIQFLIVIPLMIIPMLGSNTVQDLMNTIINMTAAASMLPPLFIMLAYLNLRAKLD
                     HLPRDFRMGSRRTGIIVVSMLIAIFAVGFVASTFPTGANILTIIFYNVGGIVIFLGFA
                     WWKYSKYIKGLTAEERHIEATPASNVD"
BASE COUNT         3133 a         3487 c         3247 g         3121 t
ORIGIN      
        1 tcggtggcgt tttttatcgc ccacgcacta ccagcgcctg gtccagctcg cgatacgctt
       61 caaccagttt ctctagtgaa acgcgactta aaccgctggg atttggcagc acccaaatct
      121 gcgtcgaacc aatggtgagc gtttgtttcc cccactgtgc accgcgctgg ctgaatccct
      181 gttcatatgc ttgtttgccc agaatcgcca acgcctgcgg ctgataatct tcaatttttt
      241 caatcagctt acgcccacct gcgtgcagct cctgctttga aacttcattg gcttgcaccg
      301 ttggacggtc taccagtttg gtgacgccac aacgataatc cagcagatgc tgtgcctcct
      361 gcggcttcaa ctgacggtcg gtaaacccgg cctgatatat caccttccag aagcgatttg
      421 ctggatgagc aaagggaaaa ccagtcccgg cggatgaaag cccagggttg ataccgcaaa
      481 acacgacccg taaccctgga gccaaaatat cctcaaccat atttactcct ttctaacatc
      541 accaggaaaa gtataacgga ttgaaaatac attgtttata aaaacagcag gcgcacggta
      601 atggctggat tgcgacacgg agttacttta taatccgcta ccatggcccc ttagctcagt
      661 ggttagagca ggcgactcat aatcgcttgg tcgctggttc aagtccagca ggggccacca
      721 gatatagcaa aggctgacga gaaatcgtca gcctttttct ttttatatct cagttacttt
      781 gcgtgccagt aagccgctgc acgtacccgc tgtgggtcat actgttccgc ttcaaagcgg
      841 cggcttaaat tcttaacgac tttaccttcg ccggttatcc agatgaagta atcatcggca
      901 gggatttgca tctgcgccag acgcgcatct accgcctgct catcatgtgc cagccattcg
      961 atattaaaac catcaaggtg cgcgagataa tcctgacagg cgttatcccg cacgctaacc
     1021 agcgcactaa cttgcggttt aacggcaagt ttgctcaacg tttccaggcg gcggcgcagt
     1081 gcgggcattc cggattcatc gcagacatac agctgatacg cgtaatcttc cggcaccacc
     1141 agcgaaccgc gcggaccagc caccgtaagt ttatcgcccg gttgcgcctg catcgcccag
     1201 ccgctggcga ccccaccgtc gtgaataaag aaatcgatcg ccagttcatg gcgtagttcg
     1261 tcatacagcg gcgtatagtc acgcgacggt gggcgtggtc cttccggcca gacgatgccc
     1321 tcttccgtta ccgttggcgg cacaaagtga gcgtcaggtt gaggaaagaa gagtttgctg
     1381 tgatcgtcaa agccgcgcga tgtaaaaccg tccagcgcct cgccgccgag gacaatgcgc
     1441 tgaaaaccgg cgctgatgcg ctcaacgcgt aacacagtca gttcacggaa gcgcagatca
     1501 ttgcgaacgc gctgcgggta gcggggggag ttattcattg ttatcgcctt cgtgatggta
     1561 atcagatata tctaaataat tttcgtaaat gataatgatt gttaatcatg ataaatgcaa
     1621 gcgattagta gaactgatat gtctatagtc tgataagacg aaccgcctct tctcaggcat
     1681 cattactcaa cgccggatgc ggcgtgaacg ccttatccgg cctacgtgtg agatgagtcc
     1741 acatttaaaa atcattttta ttcttgcaag agtgctcata tcagatataa attagatata
     1801 tctaatcaag aaaaaggagg ctgatatgag ccatcatcac gaagggtgtt gtaaacatga
     1861 aggccagcca cgccatgagg gctgctgcaa aggtgagaag tcagaacacg agcactgcgg
     1921 acacggtcac cagcatgaac acggtcaatg ctgcggtggt cgccacggtc gcggcggcgg
     1981 tcgtcggcaa cgtttctttg gtcacggtga attgcgtctg gtgattctgg atattctctc
     2041 gcgcgatgac agccacggtt acgaattgat taaagcgatt gagaatctaa cccaggggaa
     2101 ttacacccca agcccgggcg tcatctaccc aacgctggat tttctgcagg agcagtcgct
     2161 gattaccatc cgcgaagagg aaggtggtaa gaagcagatt gcgctgaccg aacaaggcgc
     2221 gcagtggctg gaagaaaacc gcgaacaggt ggagatgatt gaagaacgca tcaaagcgcg
     2281 ttgcgttggc gcggcgctgc gccagaaccc gcaaatgaag cgggcgctgg ataattttaa
     2341 agcggtgctg gatttacgcg tcaaccagag cgatatcagt gatgcacaaa taaaaaagat
     2401 cattgcggtg atcgaccgcg ccgcttttga tattacgcaa ctggattaat cgccgcatcc
     2461 gccagtggcg cggtgcaatt gccggatgcg acgcttgacg cgccttatcc ggcctacacc
     2521 cactacacac cccgcaggcc tgataagatg cgccagcatc gcatcaggca ttgtgctcca
     2581 accgccggat ccggcatacc gattaatgca gcaccgtcac cgcgtcttcc agtcggctgg
     2641 cgcggtgttt caccatcgcc gacacctgcg cactctcttc caccagctca gcatttttct
     2701 gggtgatcag gttaagctca tccactgcac gggtcaggct ggaaagccca tcggcctgtt
     2761 ccagcgttga atggctaatc tgggcgatca actgggtgac gtttttcacc tgtgccacaa
     2821 tatcttccat cgtccgtccg gcggcgtgta cctgctgcga accggattgc accttatcag
     2881 cactggcatc aatcagcttg cgaatatcgt tggcagcatt agcgctgcgg ctggctaaat
     2941 gacgcacttc ccctgccacc actgcaaaac ctttgccctg ttcgccggca cgcgccgctt
     3001 ccaccgccgc attcagggcc agaatattgg tctgaaacgc aatatcgtta atcagcgaag
     3061 taatggtgcc aatgcgctgg gtactgtcgg cgatatcgtc cattgtcttg atcaccgtgg
     3121 tcatcgcctc cccaccctgc actgccgcat tactggcgat gatagaaagt ttatcggcag
     3181 ccgacgccgt ggcagagttc tgtttcaccg acgccgccat ttggttcatg gtcgccaccg
     3241 tttgctgaac gttatcaact gtctgctggg tatgttcgtt cagttcatcg gtgcctttcg
     3301 ccagcgtctc actgccattt ctgacactgg acacctggct tgagacatcg ttaattagcc
     3361 aacggcacat caggccaagc tgccctaccg cgcgtaatgt cagccccagc tcatcgctgc
     3421 gattcaggtg ctcaacacta ttacgctctc cggtcgccac cttcagtgcc tgacgggcga
     3481 cattttctat cgggcgcaca atctgccatt caaaacaagc gcttgccaac aataccacta
     3541 acacacagag gaaatacgtc accaccgggg cagcaacaaa ccaaagcatg gccgccagca
     3601 agataaacat cagggtcatc actccacgcg cccgccagcg aagcggtaat gaaggcagtt
     3661 tacccagcca gcctttacgc accaccaggc ctttatgaat acgcttactg gtacgtccgg
     3721 cgttcagcgc tttgtacagc ggctccaccg ccgcaatctc ttcatccgtc gcccgggtac
     3781 gaatcgacat atagccactg atttttccct cgcgcaccat cggtaccgca ttggcccgca
     3841 cccaataatg gtcgccattt ttgcggcgat ttttcacgat gccgctccag ggctcccctt
     3901 ttttcagggt gaaccacata tccgcaaacg ccgcttttgg catatccggg tgacgcacca
     3961 tgttgtgcgg ctgcctttgt aactcttgca aggtaaagcc gctcacctgc acaaaagtgt
     4021 cattagcatg agtgatatag ctttgcagat cggtagtgga catcagagtg gtatcgtccg
     4081 ccagcggggt attttgctgg gtgacatacg gatgagaaga catgttcgcg tcctatgcag
     4141 gttatatggt tgttaacttc ttgtcagagt ttatgtcggc cccgctgcgg ttatctttaa
     4201 ccgattaatt tgatttagat cgcaatttgc gattaaagca caaatctaat tccttgattt
     4261 aaaatacttt cactctgtta ctatacgaaa acgttaatta tcttgcccaa aatcaggcaa
     4321 ttatcgccct gaaaacgtgc atttgcacag caatcatcaa atccataccc gacaaaaacc
     4381 gtgcaaaata acaacgaatg ttaacaaata gcattaaata ctgcgcaaat gataaccaca
     4441 tttgtgttta tcccgatttt cgcgatcgca gccggagtgg cgcaatccct gcaatactta
     4501 aatcggtatc atgtgatacg cgagcctccg gagcatattt tgaacaggtt accttcgagc
     4561 gcatcggctt tagcgtgcag cgcccacgcc ctgaatctca ttgagaagcg aacgctggat
     4621 catgaggaga tgaaagcact taaccgagag gtgattgaat acttcaaaga gcatgtcaat
     4681 ccggggtttt tagagtatcg caaatctgtt accgccggcg gggattacgg agccgtagag
     4741 tggcaagcgg gaagtttaaa tacgcttgtc gacacccagg gacaggagtt tatcgactgc
     4801 ctgggaggtt ttggaatttt caacgtgggg caccgtaatc cagttgtggt ttccgccgta
     4861 cagaatcaac ttgcgaaaca accgctgcac agccaggagc tgctcgatcc gttacgggcg
     4921 atgttggcga aaacccttgc tgcgctaacg cccggtaaac tgaaatacag cttcttctgt
     4981 aatagcggca ccgagtccgt tgaagcagcg ctgaagctgg cgaaagctta ccagtcaccg
     5041 cgcggcaagt ttacttttat tgccaccagc ggcgcgttcc acggtaaatc acttggcgcg
     5101 ctgtcggcca cggcgaaatc gaccttccgc aaaccgttta tgccgttact gccgggcttc
     5161 cgtcatgtgc cgtttggcaa tatcgaagcc atgcgcacgg ctcttaacga gtgcaaaaaa
     5221 accggtgatg atgtggctgc ggtgatcctc gaaccgattc agggtgaagg tggcgtaatt
     5281 ctgccgccgc cgggctatct caccgccgta cgtaagctat gcgatgagtt cggcgcactg
     5341 atgatcctcg atgaagtaca aacgggcatg gggcgcacgg gcaagatgtt cgcctgcgag
     5401 catgagaacg tacagccgga tatcctctgc cttgccaaag cgctcggcgg cggcgtgatg
     5461 ccgattggcg cgaccatcgc cactgaagag gtgttttcag ttctgttcga caacccattc
     5521 ctgcatacca ccacctttgg ctgcaacccg ctggcctgtg cggcggcgct ggcgaccatc
     5581 aatgtgttgc tggagcagaa cttactggct caggctgagc aaaaaggcga tatgttgctg
     5641 gacggtttcc gtcaactggc gcgggaatat cccgatctgg tacaggaagc gcgtggtaaa
     5701 gggatgttga tggcaattga gtttgttgat aacgaaatcg gctataactt tgccagcgag
     5761 atgttccgcc agcgcgtact ggtggccgga acgctcaata acgccaaaac gatccgcatt
     5821 gaaccgccac agacactgac cattgaacag tgtgaactgg tgatcaaagc ggcgcgtaag
     5881 gcgctggcgg ccatgcgagt aagtgtcgaa gaagcgtaat atcaaatcgg atggcgatac
     5941 gacgtcgcca tccgatcttt ttatacgacg cgtacgcccg caggcatcat ccgctccggc
     6001 gttaacaaca cgctttcact gccgtcatcg gtttccgcac acaacagcat gcattccgac
     6061 gtttcaccac gcattttcgc tttttgcaga ttgcataaga ccaccaccgt tttccccatc
     6121 agctcttctt cgctgtagta cggcaccagg ctggtcacgg tttgcagtgt tttttccccc
     6181 acatcaacct gtacgatgta cagcttgtcg gcgttttcat ggcgtttcac ttccacaatc
     6241 tttccgacgc gcatttccag acgtgcaaaa tcagcgtaag ccacggtttc cattgtttcc
     6301 ttccttcggg taaaatttta ctaaactata gcaaaagttt ttctcaatcc tgtaggctaa
     6361 aaatggagaa tgcaggcgtg atcacattcg tgagccgctg tgttaccgtt acagcgtcaa
     6421 agaaacgcgc tttatttact gaaaacaggt gacccgataa gtacttcctc tacaatgggg
     6481 gcgcacatca gggaaagtaa aaaaggtaaa catggcaaca ctaaaagaca tcgcaatcga
     6541 agctggcgta tccctggcga cagtatccag ggtcttaaat gacgatccga cattgaatgt
     6601 gaaagaagag acaaaacatc gcattctcga gatcgccgaa aagctggagt acaagaccag
     6661 tagtgcccgc aaactccaga caggtgcagt caaccaacac catattctgg ctatctacag
     6721 ctaccaacag gagctggaga tcaacgatcc ttactatctg gcgatccgcc acggcattga
     6781 aactcagtgc gaaaagctgg gcattgagct caccaactgt tatgaacaca gcggattacc
     6841 agacattaaa aacgtcaccg gtattttaat tgtcggcaaa cccacgcccg cccttcgcgc
     6901 cgccgcctgt gcgttgaccg acaatatctg ttttatcgac tttcacgaac ccggcagcgg
     6961 ttacgatgcg gtggatatcg atctggcacg catcagtaaa gaaatcatcg acttctatat
     7021 caatcagggc gttaatcgta ttggttttat tggcggtgaa gatgagccag gcaaagcgga
     7081 tattcgtgag gtcgcctttg cggaatatgg ccgactgaaa caagtggtac gcgaagagga
     7141 tatctggcgc ggaggctttt ccagttcgtc gggttatgaa ctggcaaaac agatgctggc
     7201 gcaggaagac tatccgaagg cactgtttgt tgcttccgat tccattgcta tcggcgtact
     7261 gcgggcaatt catgaacgag gcctgaacat cccacaggat atttcgctta tcagcgttaa
     7321 cgatatcccc accgcgcgat ttacctttcc gccgctctcc accgtgcgca tccattccga
     7381 gatgatggga agtcagggcg ttaacctggt gtatgaaaaa gcccgcgatg gtcgcgcgct
     7441 gccgctgtta gtcttcgttc ccagcaaatt aaaactgcgc ggcacgaccc gttaaatccc
     7501 cttacacact gtccggcaat cgtttttgcc ggacagtgct gccgtttatt ttcgtgatcc
     7561 agttaaagta aatgcattta tctgctactt tttagtaaaa attttactaa actccccagc
     7621 aattacacaa actaccatca ccatgaatgg ttccgatttc tctctaccgg gaggccctat
     7681 gaatcgctgg gaaaacattc agctcaccca cgaaaaccga cttgcgccgc gtgcgtactt
     7741 tttttcatat gattctgttg cgcaagcgcg tacctttgcc cgcgaaacca gcagcctgtt
     7801 tctgccctta agcggtcagt ggaatttcca cttttttgac catccgctgc aagtaccaga
     7861 agccttcacc tctgagttaa tggctgactg ggggcatatt accgtccccg ccatgtggca
     7921 aatggaaggt cacggcaaac tgcaatatac cgacgaaggt tttccgttcc ccatcgatgt
     7981 gccgtttgtc cccagcgata acccaaccgg tgcctatcaa cgtattttca ccctcagcga
     8041 cggctggcag ggtaaacaga cgctgattaa atttgacggc gtcgaaacct attttgaagt
     8101 ctatgttaac ggtcagtatg tgggtttcag caagggcagt cgcctgaccg cagagtttga
     8161 catcagcgcg atggttaaaa ccggcgacaa cctgttgtgt gtgcgcgtga tgcagtgggc
     8221 ggactctacc tacgtggaag accaggatat gtggtggtca gcggggatct tccgcgatgt
     8281 ttatctggtc ggaaaacacc taacgcatat taacgatttc actgtgcgta ccgactttga
     8341 cgaagcctat tgcgatgcca cgctttcctg cgaagtggtg ctggaaaatc tcgccgcctc
     8401 ccctgtcgtc acgacgctgg aatataccct gtttgatggc gaacgcgtgg tgcacagcag
     8461 cgccattgat catttggcaa ttgaaaaact gaccagcgcc agctttgctt ttactgtcga
     8521 acagccgcag caatggtcag cagaatcccc ttatctttac catctggtca tgacgctgaa
     8581 agacgccaac ggcaacgttc tggaagtggt gccacaacgc gttggcttcc gtgatatcaa
     8641 agtgcgcgac ggtctgttct ggatcaataa ccgttatgtg atgctgcacg gcgtcaaccg
     8701 tcacgacaac gatcatcgca aaggccgcgc cgttggaatg gatcgcgtcg agaaagatct
     8761 ccagttgatg aagcagcaca atatcaactc cgtgcgtacc gctcactacc cgaacgatcc
     8821 gcgtttttac gaactgtgtg atatctacgg cctgtttgtg atggcggaaa ccgacgtcga
     8881 atcgcacggc tttgctaatg tcggcgatat cagccgtatt accgacgatc cgcagtggga
     8941 aaaagtctac gtcgagcgca ttgttcgcca tatccacgcg cagaaaaacc atccgtcgat
     9001 catcatctgg tcgctgggca atgaatccgg ctatggctgt aacatccgcg cgatgtacca
     9061 tgcggcgaaa gcgctggatg acacgcgact ggtgcattac gaagaagatc gcgatgctga
     9121 agtggtcgat attatttcca ccatgtacac ccgcgtgccg ctgatgaatg agtttggtga
     9181 atacccgcat ccgaagccgc gcatcatctg tgaatatgct catgcgatgg ggaacggacc
     9241 gggcgggctg acggagtacc agaacgtctt ctataagcac gattgcattc agggtcatta
     9301 tgtctgggag tggtgcgacc acgggatcca ggcacaggac gaccacggca atgtctggta
     9361 taaattcggc ggcgactacg gcgactatcc caacaactat aacttctgtc ttgatggttt
     9421 gatctattcc gatcagacgc cgggaccggg cctgaaagag tacaaacagg ttatcgcgcc
     9481 ggtaaaaatc cacgcgcggg atctgactcg cggcgagttg aaagtcgaaa ataaactgtg
     9541 gtttaccacg cttgatgact acaccctgca cgcagaggtg cgcgccgaag gtgaaacgct
     9601 cgcgacgcag cagattaaac tgcgcgacgt tgcgccgaac agcgaagccc ccttgcagat
     9661 cacgctgccg cagctggacg cccgcgaagc gttcctcaac attacggtga ccaaagattc
     9721 ccgcacccgc tacagcgaag ccgggcattc tatcgccact tatcagttcc cgctgaagga
     9781 aaacaccgcg cagccagtgc ctttcgcacc aaataatgcg cgtccgctga cgctggaaga
     9841 cgatcgtttg agctgcaccg ttcgcggcta caacttcgcg atcaccttct caaaaatgag
     9901 tggcaaaccg acatcctggc aggtaaatgg cgagtcgctg ctgacccgcg agccaaagat
     9961 caacttcttc aagccgatga tcgacaacca caagcaggag tacgaagggt tgtggcagcc
    10021 gaatcatttg cagatcatgc aggaacatct gcgcgacttt gccgtagaac agagcgatgg
    10081 tgaagtgttg atcatcagcc gcacagttat tgcaccgccg gtgtttgact tcgggatgcg
    10141 ctgtacctac atctggcgca tcgctgccga tggccaggtt aacgtggcgc tttccggcga
    10201 gcgttacggc gactatccgc acatcattcc gtgcatcggt ttcaccatgg ggattaacgg
    10261 cgaatacgat caggtggcgt attacggtcg tggaccgggc gaaaactacg ccgacagcca
    10321 gcaggctaac atcatcgata tctggcgcag caccgtcgat gccatgttcg agaactatcc
    10381 cttcccgcag aacaacggca accgtcagca tgtccgctgg acggcactga ctaaccgcca
    10441 cggcaacggt ctgctggtgg ttccgcagcg cccaattaac ttcagcgcct ggcactatac
    10501 ccaggaaaac atccacgctg cccagcactg taacgagctg cagcgcagtg atgacatcac
    10561 cctgaacctc gaccaccagc tacttggcct cggctccaac tcctggggca gcgaggtgct
    10621 ggactcctgg cgcgtctggt tccgtgactt cagctacggc tttacgttgc tgccggtttc
    10681 tggcggagaa gctaccgcgc aaagtctggc gtcgtatgag ttcggcgcag ggttcttttc
    10741 cacgaatttg cacagcgaga ataagcaatg aggatcatcg ataacttaga acagttccgc
    10801 cagatttacg cctctagcaa gaagtggcaa cgctgcgttg aagcgattga aaatatcgac
    10861 aacattcagc ctggcgtcgc ccactccatc ggtgactcat tgacttaccg cgtggagaca
    10921 gactccgcga ccgatgcgct atttaccggg catcgacgct attttgaagt gcattactac
    10981 ctgcaagggc agcaaaaaat tgaatatgcg ccgaaagaga cattacaggt agtggaatat
    11041 tatcgtgatg aaactgaccg tgaatattta aaaggctgcg gagaaaccgt tgaggtccac
    11101 gaagggcaaa tcgttatttg cgatatccat gaagcgtatc ggtttatctg caataacgcg
    11161 gtcaaaaaag tggttctcaa agtcaccatc gaagatggtt atttccataa caaataacaa
    11221 ctacggcggc aaaaggagtt tgccgccacc gctaccctac acattttcgg agatgtgtta
    11281 tgtctgatac caaacgtaat acaatcggca aattcggctt gctctcgctg acttttgctg
    11341 ccgtttacag ctttaacaac gttatcaata ataatattga gcttggactg gcctcggcac
    11401 cgatgttttt cctcgcgacg attttttatt ttattccctt ctgtctgatc atcgcagaat
    11461 ttgtttcgtt aaataaaaac tcagaagccg gtgtctacgc gtgggtaaaa agttcgctgg
    11521 gcggacgttg ggcatttatt actgcctata cctactggtt cgtaaacctg ttctttttca
    11581 cctcactgtt gccgcgcgtt attgcttatg cttcgtatgc cttcctcgga tacgaatata
    11641 ttatgacgcc ggttgccacc accattatca gtatggtgct gttcgccttc tccacctggg
    11701 tttccaccaa cggggcgaaa atgttggggc caattacctc cgtcacttca acgctgatgc
    11761 tgctgttaac gctctcctac attttactgg caggtacggc gctggttggc ggcgtacagc
    11821 ctgctgaccc catcaccgtt gacgcgatga tcccgaactt caactgggcg ttcctcggcg
    11881 ttaccacctg gatctttatg gccgcaggtg gcgcggagtc cgtcgctgtg tacgttaacg
    11941 acgtcaaagg cggttcgaaa tcgttcgtta aagtgatcat cctcgccggg atttttatcg
    12001 gcgtactgta ttccgtctcc tcggtgctga ttaacgtctt cgtcagcagc aaagagttga
    12061 aatttaccgg cggatcggtg caggtattcc atggcatggc ggcgtatttt ggtctaccgg
    12121 aagcgttgat gaatcgcttt gtcggtctgg tgtcctttac cgcgatgttc ggttccctgc
    12181 tgatgtggac cgcaacgccg gtgaaaattt tcttctccga aatcccggaa ggcatctttg
    12241 gtaagaaaac cgtcgaactg aacgaaaacg gcgttccggc gcgcgcagcg tggatccagt
    12301 tcctgatcgt catcccgctg atgattatcc cgatgctcgg ttccaatacc gtgcaggatc
    12361 tgatgaatac tattattaat atgaccgccg cagcgtccat gcttccgccg ttattcatca
    12421 tgctggctta cctgaattta cgcgccaaat tagatcacct gccacgcgat ttccgtatgg
    12481 gctcccgccg caccggtatt atcgttgttt caatgctgat tgcgatattt gccgtagggt
    12541 ttgtcgcttc gacattcccg actggcgcga atattctgac catcattttt tataacgtcg
    12601 gcggtattgt tatcttcctt ggctttgcgt ggtggaaata cagtaaatat ataaagggat
    12661 taacggctga agagcgccat attgaagcga cgccagccag caatgttgat taagcagaat
    12721 aataaaaaat gagcaggcat tttccctctt cctggatgag gagagggaaa atagtttctg
    12781 cctttatatt tttataatta caacgataaa aggctgtact ttttctttag ctcatggatt
    12841 aacacaatga aattaatcac tgcaccatgc agagcattac ttgctctgcc gttttgctac
    12901 gccttttctg cggcaggaga agaagcacgt ccggcagaac atgacgacac aaaaacaccc
    12961 gcaattacct cgacatcttc tccttcat
//
LOCUS       DADMJE010000117        12953 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.118, whole genome shotgun sequence.
ACCESSION   DADMJE010000117 DADMJE010000000
VERSION     DADMJE010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12953
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.118"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(235..1575)
                     /gene="fadL"
                     /locus_tag="JN001_002942"
     CDS             complement(235..1575)
                     /gene="fadL"
                     /locus_tag="JN001_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708225.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid transporter FadL"
                     /protein_id="HAY9054108.1"
                     /translation="MSQKTLFTKSALAVAVALISTQAWSAGFQLNEFSSSGLGRAYSG
                     EGAIADDAGNVSRNPALITMFDRPTFSAGAVYIDPDVNISGTSPSGRSLKADNIAPTA
                     WVPNMHFVAPINDQFGWGASITSNYGLATEFNDTYAGGSVGGTTDLETMNLNLSGAYR
                     LNNAWSFGLGFNAVYARAKIERFAGDLGQLVAGQIMQSPAGQTPQGQALAATANGIDS
                     NTKIAHLNGNQWGFGWNAGILYELDKNNRYALTYRSEVKIDFKGNYSSDLNRAFNNYG
                     LPIPTATGGATQSGYLTLNLPEMWEVSGYNRVDPQWAIHYSLAYTSWSQFQQLKATST
                     SGNTLFQKHEGFKDAYRIALGTTYYYDDNWTFRTGIAFDDSPVPAQNRSISIPDQDRF
                     WLSAGTTYAFNKDASVDVGVSYMHGQSVKINEGPYQFESEGKAWLFGTNFNYAF"
     gene            1947..2231
                     /locus_tag="JN001_002943"
     CDS             1947..2231
                     /locus_tag="JN001_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF406 family protein"
                     /protein_id="HAY9054109.1"
                     /translation="MSKCSADETPVCCCMDVGTIMDNSDCTASYSRVFANRAEAEQTL
                     AALTEKARSVESEPCKISPTFTEESDGVRLDIDFTFACEAEMLIFQLGLR"
     gene            2411..3721
                     /gene="fadI"
                     /locus_tag="JN001_002944"
     CDS             2411..3721
                     /gene="fadI"
                     /locus_tag="JN001_002944"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase FadI"
                     /protein_id="HAY9054110.1"
                     /translation="MGQVLPLVTRQGDRIAIVSCLRTPFARQATAFHGIPAVDLGKMV
                     VGELLARSEIPAEVIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVSRACATS
                     FQAVANVAESLMAGTIRAGIAGGADSSSVLPIGVSKKLARVLVDVNKARTMSQRLKLF
                     SRLRLRDLMPVPPAVAEYSTGLRMGDTAEQMAKTYGITREQQDALAHRSHQRAAQAWS
                     DGKLKEEVMTAFIPPYKQPLVEDNNIRGNSSLADYAKLRPAFDRKHGTVTAANSTPLT
                     DGAAAVILMTESRAKELGLVPLGYLRSYAFTAIDVWQDMLFGPAWSTPLALERAGLTM
                     SDLTLIDMHEAFAAQTLANIQLLGSERFACEVLGRAHATGEVDDSKFNVLGGSIAYGH
                     PFAATGAWMITQTLHELRRRGGGFGLVTACAAGGLGAAMVLEAE"
     gene            3721..5865
                     /gene="fadJ"
                     /locus_tag="JN001_002945"
     CDS             3721..5865
                     /gene="fadJ"
                     /locus_tag="JN001_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid oxidation complex subunit alpha FadJ"
                     /protein_id="HAY9054111.1"
                     /translation="MEMASAFTLNVRLDNIAIITIDVPDEKMNTLKAEFASQVRAIIK
                     QLRENKELRGVVFISAKPDNFIAGADINMIGNCKTVQEAEALARQGQQLMAEIHALPI
                     PVIAAIHGACLGGGLELALACHGRVCTDDPKTVLGLPEVQLGLLPGSGGTQRLPRLIG
                     VSTTLEMILTGKQLRAKQALKLGLVDDVVPHSILLEVAVELAKKDRPSSRPLPVRERI
                     LAGPLGRALLFKMVGKKTEHKTQGNYPATERILEVVETGLAQGTSSGYDAEARAFGEL
                     AMTPQSQALRSIFFASTDVKKDPGSDAPPAPLNSVGILGGGLMGGGIAYVTACKAGLP
                     VRIKDINPQGINHALKYSWDQLEGKVRRRHLKASERDKQLALISGTTDYRGFAHRDLI
                     IEAVFENLELKQQMVAEVEQNCAAHTIFASNTSSLPIGDIAAHATRPEQVIGLHFFSP
                     VEKMPLVEIIPHAGTSAQTIATTVKLAKKQGKTPIVVRDKAGFYVNRILAPYINEAIR
                     MLTKGERVEHIDAALVKFGFPVGPIQLLDEVGIDTGTKIIPVLEAAYGERFSAPANVV
                     SSILNDDRKGRKNGRGFYLYGQKGRKSKKQVDPAIYPLIGAQGQGRLSAPQVSERCVM
                     LMLNEAVRCVDEQVIRSVRDGDIGAVFGIGFPPFLGGPFRYIDSLGAGEVVAIMQRLA
                     TQYGSRFTPCERLVEMGARGESFWKTTATDLQ"
     gene            6068..6553
                     /gene="sixA"
                     /locus_tag="JN001_002946"
     CDS             6068..6553
                     /gene="sixA"
                     /locus_tag="JN001_002946"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphohistidine phosphatase SixA"
                     /protein_id="HAY9054112.1"
                     /translation="MQVFIMRHGDAALDAASDSVRPLTTNGCDESRLMANWLKGQKVE
                     IERVLVSPFLRAEQTLEEVGDCLNLPSSAEVLPELTPCGDVGLVSAYLQALTNEGVAS
                     VLVISHLPLVGYLVAELCPGETPPMFTTSAIASVTLDESGNGTFNWQMSPCNLKMAKA
                     I"
     gene            7228..7488
                     /locus_tag="JN001_002947"
     CDS             7228..7488
                     /locus_tag="JN001_002947"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY9054113.1"
                     /translation="MSKFVKTAIAAAMVMGVFTSTATIAAGNNGTARFYGTIEDSVCS
                     IVPDDHKLEVDMGDIGAEKLKNNGTTTPKSFQIRLQDCVFDT"
     gene            7495..7791
                     /locus_tag="JN001_002948"
     CDS             7495..7791
                     /locus_tag="JN001_002948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9054114.1"
                     /translation="MTTTFTGTVSSANSGNYYTIFNTDTGAAFNNVSLAIGDSLGTSY
                     KSGMGIDQKIVKDTSTNKGKAKQTLNFKAWLVGAADAPDLGNFEANTTFQITYL"
     gene            7873..10515
                     /gene="yfcU"
                     /locus_tag="JN001_002949"
     CDS             7873..10515
                     /gene="yfcU"
                     /locus_tag="JN001_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001112832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial usher protein YfcU"
                     /protein_id="HAY9054115.1"
                     /translation="MPDHSLFRLRILPWCIALAMSGSYSSVWAEDDIQFDSRFLELKG
                     DTKIDLKRFSSQGYVEPGKYNLQVQLNKQPLAEEYDIYWYAGEDDASKSYACLTPELV
                     AQFGLKEDVAKNLQWSHDAKCLKSGQLEGMEIKADLSQSALVISLPQAYLEYTYPDWD
                     PPSRWDDGISGIVADYSINAQTRHEENGGDDSNEISGNGTVGVNLGPWRMRADWQTNY
                     QHTRSNDDDEFSGDETQKKWEWSRYYAWRALPSLKAKLALGEDYLRSDIFDGFNYVGG
                     SVSTDDQMLPPNLRGYAPDISGVAHTTAKVTVSQMGRVIYETQVPAGPFRIQDLGDSV
                     SGTLHIRIEEQNGQVQEYDISTASMPYLTRPGQIRYKIMMGRPQEWGHHVEGEFFSGA
                     EASWGIANGWSLYGGALGDENYQSAALGVGRDLSTFGAVAFDVTHSHTKLDKDTAYGK
                     GSLDGNSFRVSYSKDFDQLNSRVTFAGYRFSEENFMTMSEYLDASDSGMVRTGNDKEM
                     CTATYNQNFRDAGVSVYLNYTRHTYWDREEQINYNIMLSHYFNMGSIRNVSISMTGYR
                     YEYDNQADKGMYISLSMPWGDNSTVSYNGNYGSGTDSSQVGYFSRVDDATHYQLNVGT
                     SDKHTSVDGYYSHDGSLAQVDLSANYHEGQYTSAGLSLQGGATLTAHGGALHRTQNMG
                     GTRLLIDADGVADVPVEGNGAAVYTNMFGKAVVSDVNNYYRNQAYIDLNRLPENAEAT
                     QSVVQATLTEGAIGYRKFAVISGQKAMAVLRLSDGSHPPFGAEVKNDNEQTVGLVDDD
                     GNVYLAGVKPGEHMSVFWSGVAHCDINLPDPLPADLFNGLLLPCQHKGNVAPITSPAV
                     KPAIQEQTQRVTPTEPPTSISVNQ"
     gene            10535..11287
                     /locus_tag="JN001_002950"
     CDS             10535..11287
                     /locus_tag="JN001_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000482750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus periplasmic chaperone"
                     /protein_id="HAY9054116.1"
                     /translation="MFNLTNTAKIVVPALALLATAVSFSSHASVTPDRTRLVFNESDK
                     SISVTLRNNDPTLPYLAQSWIEDAKGNKISSPLAVLPPVQRIDAMMNGQVKVQGLPDI
                     NKLPADRESVFYFNVREISPKSNKPNTLQIALQTRIKLFWRPKALENTSMKSPWQHKV
                     TLIRNGQDFTVNNPTPYYVIISNASAKKGGNPPAGFTPLMMEPKTSAPLNAKMDSVPV
                     LTYINDYGARMPLYFKCTGNSCQVDEEQSRKG"
     gene            11303..11812
                     /locus_tag="JN001_002951"
     CDS             11303..11812
                     /locus_tag="JN001_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001733155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9054117.1"
                     /translation="MSHKFVAGAGLLVLAGWGISGLAVAGSDIKQVDLTLRILVDGPP
                     PCSVKGSAVKFGNVIINRIDGTNYQQDAKYTLNCGNKVSDDLRMQLKGNTAVINGETV
                     LSTDIAGLGVRIENAADNSLFAVGENNWTPFNVNTQPQLKAVPVKQSGVQLTPSEFNA
                     TMTMVVDYQ"
     gene            11809..12297
                     /locus_tag="JN001_002952"
     CDS             11809..12297
                     /locus_tag="JN001_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001709066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9054118.1"
                     /translation="MKKFLLLLLCAGCGAVLAAEDDITFHGTLMSPPACSISGGQTIE
                     VQFRDLIIDSIDGNYGRQKVDYELSCDSDVRDPEWNMTLSWTGTATSYNDSAIETDVP
                     GFGIELQHDGQRFKLNEPLSINATDFSQKPKLEAVPVKAADAVLTDTTFSAYATLRVD
                     YQ"
     gene            12294..12833
                     /locus_tag="JN001_002953"
                     /pseudo
     CDS             12294..12833
                     /locus_tag="JN001_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416836.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
BASE COUNT         3260 a         3088 c         3438 g         3167 t
ORIGIN      
        1 gtatcctgga aatgcagaaa agtaaactct ttgagaagga cgagcagaac gcctgaaaat
       61 atgcctttcc cttcaggttt gtctgtggat accgcttatt gatttgaaag ggcaagcctg
      121 ccaacaggct gtttgcaaaa ctcaggaggt aagcaatgag gacactactt tcggtgaagt
      181 gggggagtta aagtcacctg ctatgcaggt gactttatcc aggcgaacgc gttatcagaa
      241 cgcgtagtta aagttagtac cgaacagcca ggctttacct tcagactcga actggtatgg
      301 gccttcgtta attttcacgc tctgaccgtg catataagaa acaccaacgt cgactgaagc
      361 atctttatta aatgcgtaag tcgtacctgc actcagccag aaacggtcct ggtccggaat
      421 ggagatagaa cgattctgag ccggaactgg gctgtcatca aaggcgatac cggtacggaa
      481 ggtccagtta tcatcgtagt aataagtggt acccaacgcg atgcggtaag catctttaaa
      541 gccttcatgt ttctggaaca gcgtgttgcc actggttgag gtcgctttca gctgctggaa
      601 ctgactccag ctggtgtaag ccaggctata gtgaatcgcc cactgtggat caacacggtt
      661 ataacctgac acttcccaca tttcaggcag gttcagcgtc agataacccg attgcgttgc
      721 gccacctgtc gcggtaggaa ttggcaaacc gtagttatta aacgcacgat taagatcgct
      781 gctgtagtta cctttgaagt caattttcac ttcagaacgg taggtcagtg catagcggtt
      841 atttttatcc agttcataca ggattccggc gttccagcca aagccccact ggttaccgtt
      901 cagatgagcg attttggtat tactgtcgat accgttggcg gtagctgcca atgcttgccc
      961 ttgaggagtt tgcccggcag gagattgcat aatctgacca gcaaccaact gccccagatc
     1021 gcctgcgaaa cgttcaattt tcgcgcgagc gtagacggcg ttgaaaccaa gaccaaagct
     1081 ccatgcatta tttaagcgat acgcaccgct taagttcagg ttcatggttt caaggtcagt
     1141 tgtacccccg acagagccgc ctgcataagt atcattaaac tctgttgcca gaccatagtt
     1201 agaggtaata gaagcgcccc aaccaaattg gtcgttaatc ggtgcaacaa agtgcatgtt
     1261 cggaacccat gccgtaggcg cgatgttatc ggctttcagg ctacgaccag acggagacgt
     1321 tccgctgata ttcacatccg ggtcaatata aaccgcaccc gcagaaaatg tcgggcggtc
     1381 aaacatggta atcaatgcgg ggttacggct aacgttacct gcatcatcgg caattgcgcc
     1441 ttcccctgaa taagcccggc ccaggccaga ggaagaaaat tcgtttaact gaaagcctgc
     1501 cgaccaggcc tgggtggaga taagtgccac tgcgactgcg agagcagact ttgtaaacag
     1561 ggttttctgg ctcatgacca taacctcaat gatttatttt tatacaaact atgttacgtg
     1621 ctgtaacagg agcgcgaagt gtagggtctg aggtacatct tagaaatcag accagtggcg
     1681 agagtatagg tcggaccagc tggaatgttg caagtatgtt tccatctttt ttcaaatatg
     1741 atctaagaaa cgcgatccag ctggcaaaat ttggaggttg cgcactcgcg gattcgggtg
     1801 aattttgttt tagatcattt ttaagtgtga tttcggtcac ttatccgatt ttgcagaatt
     1861 aacaactgga gcagcacttt ccggaagcgt aaaatatcca caacgtttat ctggcacctt
     1921 gggtgcacat acagaggaaa tcaacgatga gtaaatgtag tgctgatgaa accccggttt
     1981 gctgctgtat ggatgttggc accattatgg acaactccga ctgcaccgcg tcttacagcc
     2041 gcgtgtttgc aaaccgcgca gaagcagaac aaacgctggc ggcgttgact gaaaaagccc
     2101 gtagcgtgga atccgaaccg tgcaaaatct ccccgacttt cactgaagag tctgacggtg
     2161 tgcgcctgga tatcgatttc acttttgcct gcgaagctga aatgctgatc ttccagctgg
     2221 gtctgcgtta attcctctcg ggtacgttcg cccctgtcag ttgctggcag gggcgttttc
     2281 ttttctttct cctgtcttca ctgtgtcata gctcccactt tcctttttct ccgcttggct
     2341 aaatgtaaaa aaatggttaa gactataatc aggtcagacc actttattta tttttttaca
     2401 ggggagtgtt atgggtcagg ttttaccgct ggttacccgc cagggcgatc gtatcgccat
     2461 tgttagctgt ttacgtacgc cttttgcccg ccaggcgacg gcttttcatg gcattcccgc
     2521 ggttgattta gggaagatgg tggtaggcga actgctggca cgcagcgaga tccccgctga
     2581 agtgattgaa cagctggtct ttggtcaggt cgtacaaatg cctgaagccc ccaacattgc
     2641 gcgtgaaatt gttctcggta ccggaatgaa tgtgcatacc gatgcttaca gcgtcagccg
     2701 cgcttgcgct accagtttcc aggcggttgc aaacgtcgca gaaagcctga tggcgggaac
     2761 tatccgagcg gggattgccg gtggggcaga ttcctcttcc gtattgccaa ttggcgtcag
     2821 taaaaaactg gcgcgcgtgc tggttgatgt caacaaagct cgaaccatga gccagcgcct
     2881 gaaactcttc tctcgcctgc gtttgcgcga tttaatgccc gtaccgcctg cagtagcaga
     2941 atattctacc ggcttgcgga tgggtgacac cgcagagcaa atggcgaaaa cctacggcat
     3001 cacccgagaa cagcaagatg cattagcgca ccgttcgcat cagcgtgccg ctcaggcatg
     3061 gtcagacgga aaactcaaag aagaggtgat gactgccttt atccctcctt ataaacaacc
     3121 gcttgtcgaa gacaacaata ttcgcggtaa ttcctcgctt gccgattacg caaagctgcg
     3181 cccggcgttt gatcgcaaac acggaacggt aacggcggca aacagtacgc cgctgaccga
     3241 tggcgcggca gcggtgatcc tgatgactga atcccgggcg aaagaattag ggctggtgcc
     3301 gctggggtat ctgcgcagct acgcatttac tgcgattgat gtctggcagg acatgttgtt
     3361 cggtccggcc tggtcaacac cgctggcgct ggaacgtgcc ggtttgacaa tgagcgatct
     3421 gacattgatc gatatgcacg aagcctttgc agctcagaca ctggcgaata ttcagttgct
     3481 gggtagtgaa cgttttgctt gtgaagtact ggggcgtgca catgccactg gcgaagtgga
     3541 cgatagcaaa tttaacgtgc ttggcggttc gattgcttac gggcatccct tcgcggcgac
     3601 cggcgcgtgg atgattaccc agacattgca tgaacttcgc cgtcgcggcg gtggatttgg
     3661 tttagttacc gcctgtgctg ccggtgggct tggcgcggca atggttctgg aggcggaata
     3721 atggaaatgg catcagcgtt tactcttaat gttcgtctgg acaacattgc tatcatcacc
     3781 atcgacgtac cggatgagaa aatgaatacc ctgaaggcgg aatttgcctc gcaggtgcgc
     3841 gccattatta agcaactccg tgaaaacaaa gagttgcgcg gcgtggtgtt tatctccgcg
     3901 aaaccggaca attttatcgc cggagcagac atcaacatga tcggcaactg caaaacggtg
     3961 caagaagcgg aagctctggc gcggcagggc caacagttga tggcggagat tcatgctttg
     4021 cccattccgg ttatcgcggc tattcatggc gcttgcctgg gtggtgggct ggagttggcg
     4081 ctggcgtgcc acggtcgcgt ttgtactgac gatcctaaaa cggtgctcgg tttgcctgaa
     4141 gtacaacttg gattgttacc cggttcaggc ggcacccagc gtttaccgcg tctgataggc
     4201 gtcagcacaa cattagagat gatcctcacc ggaaaacaac ttcgggcgaa acaggcatta
     4261 aagctggggc tggtggatga cgttgttccg cactccattt tgctggaagt cgctgttgag
     4321 ctggcgaaga aggatcgccc atcttcccgc cctctacctg tacgcgagcg tattctggcg
     4381 gggccgttag gtcgtgcgct gctgttcaaa atggtcggca agaaaacaga acacaaaact
     4441 caaggcaatt atccggcgac agaacgcatc ctggaggttg ttgaaacggg attagcgcag
     4501 ggcaccagca gcggttatga cgccgaagct cgggcgtttg gcgaactggc gatgacgcca
     4561 caatcgcagg cgctgcgtag tatctttttt gccagtacgg acgtgaagaa agatcccggt
     4621 agtgatgcac cgcctgcgcc attaaacagc gtgggaattt taggtggtgg cttgatgggc
     4681 ggcggtattg cttatgtcac tgcttgtaaa gcggggcttc cggtcagaat taaagatatc
     4741 aacccgcagg gcataaatca tgcgctgaag tacagttggg atcagctgga gggcaaagtt
     4801 cgccgtcgtc atctcaaagc cagcgaacgt gacaaacagc tggcattaat ctccggaacg
     4861 acggactatc gcggctttgc ccatcgcgat ctgattattg aagcggtgtt tgaaaatctc
     4921 gaattgaaac aacagatggt ggcggaagtt gagcaaaatt gcgccgctca taccatcttt
     4981 gcttcgaata cgtcatcttt accgattggt gatatcgccg ctcacgccac gcgacctgag
     5041 caagttatcg gcctgcattt cttcagtccg gtggaaaaaa tgccgctggt ggagattatt
     5101 cctcatgcgg gtacatcagc gcaaaccatc gccactacgg taaaactggc gaaaaaacag
     5161 ggcaaaacgc ccattgtcgt gcgtgacaaa gccgggtttt acgtcaatcg catcttagcg
     5221 ccttacatta atgaagctat ccgcatgctg accaaaggtg aacgggtaga gcacattgat
     5281 gccgcgctag tgaaatttgg ttttccggta ggtccaatcc aacttttgga tgaggtagga
     5341 atcgacaccg ggactaaaat tattcctgta ctggaagccg cttatggaga acgttttagc
     5401 gcgcctgcaa atgttgtttc ttcaattttg aacgacgatc gcaaaggcag aaaaaatggt
     5461 cggggtttct atctttatgg tcagaaaggg cgtaaaagca aaaaacaggt cgatcccgcc
     5521 atttacccgc tcattggcgc acaagggcag gggcgactct ccgcaccgca ggtttctgaa
     5581 cggtgtgtga tgttgatgct gaatgaagca gtacgttgtg ttgatgagca ggttatccgt
     5641 agcgtgcgtg acggggatat tggtgcggta tttggcattg gttttccgcc atttctcggt
     5701 ggaccgttcc gctatatcga ttctctcggc gcgggcgaag tggttgcaat aatgcaacga
     5761 ctggccacgc agtatggttc ccgttttacc ccttgcgagc gtttggtcga gatgggcgcg
     5821 cgtggggaaa gtttttggaa aacaactgca actgacctgc aataagaagg tcaaagctat
     5881 atgaatccgc gctgaatggc ggagtattgg tcaaaatgta aacgcatatt gactatactt
     5941 acgccattga ggtaaaaaac agcgtttcat tcggtgaatg gataaggcac aatgccggcc
     6001 accgttttct ttctctggtt tcagatgaaa gaaaatgggc gaatctggtt aacaaaagcg
     6061 gtgcaatatg caagttttta tcatgcgtca cggcgacgca gccctcgatg ccgccagtga
     6121 ttcggttcgt cctctgacca ctaatggttg tgacgaatct cgcctgatgg cgaactggct
     6181 gaaaggtcaa aaagtggaaa tcgaacgcgt tctggtgagc ccgttcctgc gagccgagca
     6241 aacactggaa gaagtagggg attgtctgaa cctgccttcc agtgcagaag ttctgccgga
     6301 gttaacgccc tgcggcgatg ttggtctggt cagtgcctat ttgcaggcgt tgaccaatga
     6361 aggtgttgct tcggtactgg tgatctctca cttaccgtta gtcgggtatc tggttgccga
     6421 gttatgtccg ggcgaaacgc cgcctatgtt taccacctcg gccattgcca gcgtaacgct
     6481 tgatgaaagc ggaaacggta cattcaactg gcagatgagc ccgtgtaatc tgaagatggc
     6541 aaaagctatc tgatgtgttc caaattatgc ccaatgaggt agattcattg ggcataattg
     6601 ctcatcaggc agcggatatc tgtcaacctc actactatcg aagactctcc ttatctataa
     6661 ataaaacact ttctacattc attcggaaat tattcttctg cacgtatctt gattttgccc
     6721 aaagttacat gttgaaatga ataatgtctg tttgacactc attgtcattt attaatacag
     6781 ataatagagt tgaataatca ggcaggatgt aattgaaact tgattaaatt ctggctatag
     6841 tgtttatata ttatattgtc aaaagtggat aaatgccaat cgcattatat gttcattgtt
     6901 tgttttttaa gctgttgata ttcattattg atatactttc tattttttct aaatacttat
     6961 tccgtatttt ttaaggatgt ccttaagata atctttcttc tgtcaatata ttaattaaat
     7021 ctacatttac tctttagtaa aattaaattg catcaggggt gtggaaacat cactatgcgg
     7081 ccccacacca acgaatacaa ttttctacga cctgttcttt ttggatcgca tgccgtattc
     7141 aatggctggg tataaacatt ggctattgac tgaatcaatg tattgcaatg tttatatttt
     7201 taattattta tagtttaagg acaaataatg agtaagtttg ttaaaacagc tattgctgcg
     7261 gcaatggtga tgggcgtgtt cacctctacg gcaacaatcg ctgcgggtaa caacggtact
     7321 gcacgttttt acggcaccat tgaagactca gtgtgttcta tcgttccgga cgatcacaaa
     7381 ctggaagttg atatgggtga tatcggtgcc gaaaaactga aaaataacgg caccaccacg
     7441 ccgaaaagtt tccagattcg tctgcaagat tgcgtatttg atacttagga aacaatgacc
     7501 actaccttta ctggtaccgt ttcttctgca aatagcggca attattacac cattttcaat
     7561 accgataccg gtgcggcatt taacaatgtt agcctggcga tcggtgactc tctgggtacc
     7621 tcttacaaaa gcggcatggg tattgaccag aaaatagtga aagacacttc tactaataaa
     7681 ggcaaagcga agcagacact gaactttaaa gcctggctgg tcggcgcagc tgatgcgcca
     7741 gatctgggta atttcgaagc aaataccacc ttccagatta cttacctgta aggcataccc
     7801 ccatagcgac actgctatgg gggatttaaa tggattttga ccgaacaaga ataaaaacgg
     7861 atagaaacgt gtatgcctga ccattctctt tttcgattac ggattcttcc gtggtgcatt
     7921 gcgctggcaa tgtcagggag ttatagcagt gtctgggctg aagacgacat tcagtttgat
     7981 tcccgttttc tggaattaaa aggcgacaca aaaattgatc tgaagcgttt ttccagccag
     8041 ggatatgttg agcccggaaa atacaattta caggttcaac taaataaaca gccattggcg
     8101 gaagagtacg atatttactg gtatgctggt gaagatgacg cgagcaaaag ctatgcttgt
     8161 ctgacaccgg aactggtagc gcagtttggt ttaaaagaag acgtggcgaa aaatctgcaa
     8221 tggagccacg atgctaaatg cctgaaatcc ggtcaactgg aaggcatgga aattaaggct
     8281 gatttaagcc agtccgcatt agtcatttca ctgccacagg cttacctcga atatacttat
     8341 cccgactggg atccgccttc acgttgggat gacggcatct ccgggatcgt cgcggactac
     8401 agcatcaacg cacaaacccg gcacgaagaa aatggcggtg atgatagtaa cgagatcagc
     8461 ggcaacggga cggtcggggt taacctgggg ccgtggcgta tgcgtgctga ctggcagact
     8521 aactatcaac atactcgcag taatgatgac gatgaattca gcggcgatga aactcaaaaa
     8581 aaatgggagt ggagtcgcta ctatgcctgg cgggcgttac catcattaaa agccaaactg
     8641 gcgctgggcg aggattacct cagatccgat atttttgatg gttttaacta tgttggtggt
     8701 agtgtcagta ctgacgatca aatgttgcct cccaatctgc gcggctacgc gccagacatt
     8761 tccggcgtgg cacacaccac agcaaaagtg accgtcagcc agatggggcg tgtgatttac
     8821 gaaacgcagg ttccggctgg accgtttcgt attcaggatc ttggtgattc tgtctccggt
     8881 acgttgcata ttcgcattga agaacagaac ggccaggtgc aggaatatga catcagcacc
     8941 gcctcgatgc catacctcac tcgtccaggt cagattcgct ataagatcat gatgggccgt
     9001 ccgcaagagt ggggacacca tgtcgagggt gaattttttt ctggtgctga agcttcctgg
     9061 gggatcgcta acggctggtc gttatatggc ggcgcactgg gagatgaaaa ctatcagtct
     9121 gcggcgcttg gcgtcggtcg cgatttgtct acattcggcg cggtcgcgtt tgatgttact
     9181 cactcgcaca ccaaactgga taaagacacc gcttatggca aaggttcgct ggacggtaac
     9241 tccttccgtg tgagttattc caaagacttt gaccagctca acagccgcgt tacttttgct
     9301 ggatatcgct tctcggaaga gaactttatg accatgagcg agtatctgga tgccagtgac
     9361 agcggaatgg tacgcacggg caacgacaaa gagatgtgca ccgccactta taaccagaac
     9421 ttccgcgatg cgggtgtttc ggtttatctc aactataccc gccataccta ctgggatcgc
     9481 gaggagcaga taaactacaa catcatgctc tcgcactatt tcaatatggg cagtattcgt
     9541 aatgtcagca tctcgatgac tggctaccgt tacgagtatg acaaccaggc cgacaaaggc
     9601 atgtacattt cgctcagtat gccgtggggc gacaacagta ccgttagcta taacggtaac
     9661 tatggcagtg ggacggacag cagtcaggtc ggttatttca gccgtgtcga tgacgcgact
     9721 cactatcagt tgaacgtcgg caccagtgac aaacacacca gcgttgacgg ctattacagc
     9781 catgatggtt cgctggcgca ggttgacctc agtgcgaact accatgaagg gcaatacacc
     9841 tctgcgggct tgtcgttaca gggcggcgca acgcttactg cccacggtgg cgcacttcac
     9901 cgtacccaga atatgggcgg gacacgcttg ttgattgatg ccgatggcgt tgccgatgtt
     9961 ccggtggaag gtaacggggc tgctgtttat accaatatgt ttggtaaagc cgtcgtttct
    10021 gacgtcaata actattaccg caatcaggcg tatatcgacc tcaacagatt gcctgaaaac
    10081 gctgaagcaa cccagtcggt ggtgcaagcc acgctaactg aaggtgccat tggctaccgt
    10141 aaatttgctg tcattagcgg acaaaaagcg atggcggtgc tgcgcctgag cgacggcagc
    10201 catcctccgt ttggcgcaga agtaaaaaat gataacgagc agacagtggg ccttgtcgat
    10261 gatgacggca atgtttatct ggctggggtg aaacctggcg aacacatgag tgtgttctgg
    10321 agtggtgttg cgcattgcga tatcaacctg ccggacccgc tgcctgccga tctgtttaac
    10381 ggcttgttac taccatgcca gcataaaggc aatgtagcac ctatcacttc gccggcggtc
    10441 aaaccggcga ttcaggaaca gacacagcgg gtgacgccaa cggaacctcc gacttcaatt
    10501 tcagtaaacc agtaacgtga ttaaggaatg atccatgttt aatctgacta acactgcaaa
    10561 aatcgttgtc ccggcactgg cgctgctggc gacagcggtc agtttctcca gccacgcttc
    10621 ggtgacgccc gacaggacac ggctggtgtt taacgaaagc gacaagtcca tcagcgtcac
    10681 gctgcgcaac aacgatccca cactgcctta tctggcgcag agctggatag aggatgcaaa
    10741 gggcaacaaa atcagctctc cgcttgcggt gcttccgcca gtgcagcgca tcgatgcgat
    10801 gatgaacggc caggtgaagg tgcaggggct gccggatatc aacaaactgc cggccgaccg
    10861 cgagagcgtg ttctatttca acgtgcgcga aatttcgccg aaatcaaata aaccgaacac
    10921 actgcagatt gcgctgcaga cgcgtatcaa actgttctgg cgaccgaagg cgctggagaa
    10981 caccagcatg aaaagtccgt ggcagcataa ggtgacgctc atccgtaacg gccaggactt
    11041 caccgtcaat aacccgacgc cgtactacgt gatcatcagc aacgccagcg ctaaaaaagg
    11101 cggcaacccg ccggcgggat tcacaccgct gatgatggag ccgaaaacct ccgcaccgct
    11161 gaatgcgaag atggacagcg tgccggtgct gacttacatc aacgactacg gcgcgcggat
    11221 gccgctgtac ttcaaatgca ccggcaacag ctgccaggtg gatgaagagc agagccgcaa
    11281 aggctgatgc cgggagggac ttatgagtca caagtttgta gcgggcgcag ggttgctggt
    11341 gctggccgga tggggcatca gcggtttggc tgttgctggc agtgatatca aacaggtgga
    11401 tctgacgctg cgaatcctag tcgatggacc gccgccttgc tccgtgaagg gaagcgctgt
    11461 gaaatttggc aatgtgataa tcaacaggat cgatggtacc aattaccaac aggatgcgaa
    11521 atacaccctc aactgcggta ataaagtcag cgatgactta cggatgcagc tcaaaggcaa
    11581 taccgccgtg atcaacggag aaacggttct cagcacggat atcgccggcc tgggggtgcg
    11641 gatagaaaac gccgccgaca actccctgtt tgcagttggt gaaaataact ggacgccttt
    11701 taatgtcaac actcagcctc agctgaaagc ggtgccggta aaacagagcg gggtgcaact
    11761 gactccgtcg gagtttaacg ccacgatgac catggtggtg gattaccaat gaaaaaattc
    11821 ctgctccttt tactgtgcgc tggttgcggg gctgtgctgg cggcggaaga tgacatcaca
    11881 ttccacggta cgctgatgtc gccgcccgcc tgtagcatca gcggcgggca aaccatcgaa
    11941 gtgcaatttc gcgatctcat tatcgacagc attgatggca attatggtcg tcagaaagtg
    12001 gactacgaac tgagctgcga ctcggatgtc cgcgatcccg agtggaatat gacactctcc
    12061 tggacgggga ctgccacctc ctacaacgac tctgctattg agacggatgt accgggcttc
    12121 ggaattgagc ttcagcatga cggtcagcgt tttaagctca acgagccgct ttccattaac
    12181 gccaccgatt ttagccagaa gccaaagctg gaggcggtac cggtcaaagc ggctgatgcg
    12241 gtgctgacgg acacgacctt ttctgcttac gcaaccttac gggtggatta ccaatgaaaa
    12301 cagcacacat ttattcaccc ggttatgcgc tgttagcagg cctgctgctg accgccagca
    12361 caggagcaca ggcagtcgac aacaacctgc atttttacgg caacctgctg agtaaatcct
    12421 gcacgctggt ggtggatggt gccaacctgg cagaaatcca ttttcccacc gtcagcaacc
    12481 gggatttgat ggtatctggg cagtccgcgc atctgccggt tgtgtttaag ctgaaagact
    12541 gcaaagggcc ggcgggatac aacgtcaaag tcacgctgag cggcaccgaa gacagcggtc
    12601 agccgggttt tctggcagtc gatgacacct ccaccgcgca gggcgtgggg atagggatgg
    12661 aaacgctcga cggcaagcgg gtggatatta acaacaccac cggggcgacc tttgcgctta
    12721 ccaacggcaa caatgatatt aatttccggg cctggatcta ggcgaaaagc ggtcgtgatg
    12781 taaccatcgg tgatttcacc gccagcctga cagcaacttt tgagtatatt taaaatgaaa
    12841 atccttcgtc atgttttatg tcttttattg ctgttaatgt tcaatacatg cggccaggcg
    12901 gcgacgaaag ttggtgagtt atatgtgcca gctggtgcca gttcacctgc gac
//
LOCUS       DADMJE010000118        12913 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.119, whole genome shotgun sequence.
ACCESSION   DADMJE010000118 DADMJE010000000
VERSION     DADMJE010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12913
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.119"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JN001_002954"
     CDS             complement(<1..880)
                     /gene="rarD"
                     /locus_tag="JN001_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HAY9054119.1"
                     /translation="MDAKQTRQGVLLALAAYFIWGIAPAYFKLIYYVPADEILTHRVI
                     WSFFFMVVLMSICRQWSYLKTLIQTPQKIFMLAVSAVLIGGNWLLFIWAVNNHHMLEA
                     SLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSLPIIALGLAFS
                     FAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAIADSSTSHMGQNPMLLNLLLIA
                     AGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFI
                     WVALAIFVMDAIYTQRR"
     gene            complement(932..1399)
                     /locus_tag="JN001_002955"
     CDS             complement(932..1399)
                     /locus_tag="JN001_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001350877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HAY9054120.1"
                     /translation="MSAVLTAEQALKLVGEMFVYHMPFNRALGMELERYEKEFAQLAF
                     KNQPMMVGNWAQSILHGGVIASALDVAAGLVCVGSTLTRHETISEDELRQRLSRMGTI
                     DLRVDYLRPGRGERFTATSSLLRAGNKVAVARVELHNEEQLYIASATATYMVG"
     gene            1564..2433
                     /gene="pldA"
                     /locus_tag="JN001_002956"
     CDS             1564..2433
                     /gene="pldA"
                     /locus_tag="JN001_002956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase A"
                     /protein_id="HAY9054121.1"
                     /translation="MRTLQGWLLPVFMLPMAVYAQEATVKEVHDAPAVRGSIIANMLQ
                     EHDNPFTLYPYDTNYLIYTQTSDLNKEAIASYDWAENARKDEVKFQLSLAFPLWRGIL
                     GPNSVLGASYTQKSWWQLSNSEESSPFRETNYEPQLFLGFATDYRFAGWTLRDVEMGY
                     NHDSNGRSDPTSRSWNRLYTRLMAENGNWLVEVKPWYVVGNTDDNPDITKYMGYYQLK
                     IGYHLGDAVLSAKGQYNWNTGYGGAELGLSYPITKHVRLYTQVYSGYGESLIDYNFNQ
                     TRVGVGVMLNDLF"
     gene            2566..4395
                     /gene="recQ"
                     /locus_tag="JN001_002957"
     CDS             2566..4395
                     /gene="recQ"
                     /locus_tag="JN001_002957"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026263.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HAY9054122.1"
                     /translation="MAQAEVLNLESGAKQVLQETFGYQQFRPGQEEIIDTVLSGRDCL
                     VVMPTGGGKSLCYQIPALLLNGLTVVVSPLISLMKDQVDQLQANGVAAACLNSTQTRE
                     QQLEVMTGCRTGQIRLLYIAPERLMLDNFLEHLAHWNPVLLAVDEAHCISQWGHDFRP
                     EYAALGQLRQRFPTLPFMALTATADDTTRQDIVRLLGLNDPLIQISSFDRPNIRYMLM
                     EKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNVRA
                     DVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPA
                     EAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEG
                     RQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRFGMGYVVEVIRGANNQRIRDY
                     GHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHSALQLTEAARPVLRGESSL
                     QLAVPRIVALKPKAMQKSFGGNYDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEM
                     AEQMPITASEMLSVNGVGMCKLERFGKPFMALIRAHVDGDDEE"
     gene            4459..5079
                     /gene="rhtC"
                     /locus_tag="JN001_002958"
     CDS             4459..5079
                     /gene="rhtC"
                     /locus_tag="JN001_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine export protein RhtC"
                     /protein_id="HAY9054123.1"
                     /translation="MLMLFLTVAMVHIVALMSPGPDFFFVSQTAVSRSRKEAMMGVLG
                     ITCGVMVWAGIALLGLHLIIEKMAWLHTLIMVGGGLYLCWMGYQMLRGALKKEAVSAP
                     APQIELAKSGRSFLKGLLTNLANPKAIIYFGSVFSLFVGDNVGTTARWGIFALIIVET
                     LAWFTVVASLFALPQMRRGYQRLAKWIDGFAGALFAGFGIHLIISR"
     gene            complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="JN001_002959"
     CDS             complement(5141..5761)
                     /gene="rhtB"
                     /locus_tag="JN001_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine/homoserine lactone efflux protein"
                     /protein_id="HAY9054124.1"
                     /translation="MTLEWWFAYLLTSIILSLSPGSGAINTMTTSLNHGYRGAVASIA
                     GLQTGLAIHIVLVGVGLGTLFSRSVIAFEVLKWAGAAYLIWLGIQQWRAAGAIDLKSL
                     ASTQSRRHLFQRAVFVNLTNPKSIVFLAALFPQFIMPQQPQLMQYIVLGVTTIVVDII
                     VMIGYATLAQRIALWIKGPKQMKALNKIFGSLFMLVGALLASARHA"
     gene            5872..6894
                     /gene="pldB"
                     /locus_tag="JN001_002960"
     CDS             5872..6894
                     /gene="pldB"
                     /locus_tag="JN001_002960"
                     /EC_number="3.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysophospholipase L2"
                     /protein_id="HAY9054125.1"
                     /translation="MFQQQKDWETRENAFAAFTMGPLTDFWRQRDEAEFTGVDDIPVR
                     FVRFRAQHHDRVVVICPGRIESYVKYAELAYDLFHLGFDVLIIDHRGQGRSGRLLADP
                     HLGHVNRFNDYVDDLAAFWQQEVQPGPWRKRYILAHSMGGAISTLFLQRHPGVCDAIA
                     LTAPMFGIVIRMPSFMARQILNWAEAHPRFRDGYAIGTGRWRALPFAINVLTHSRQRY
                     RRNLRFYADDPTIRVGGPTYHWVRESILAGEQVLAGAGDDATPTLLLQAEEERVVDNR
                     MHDRFCELRTAAGHPVEGGRPLVIKGAYHEILFEKDAMRSVALHAIVDFFNRHNSPSG
                     NRSTEV"
     gene            6902..7702
                     /gene="yigL"
                     /locus_tag="JN001_002961"
     CDS             6902..7702
                     /gene="yigL"
                     /locus_tag="JN001_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar/pyridoxal phosphate phosphatase YigL"
                     /protein_id="HAY9054126.1"
                     /translation="MYQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGINFVFATGR
                     HHVDVGQIRDNLEIKSYMITSNGARVHDLDGNLIFAHNLDRDIASDLFGVVNDNPDII
                     TNVYRDDEWFMNRHRPEEMRFFKEAVFKYALYEPGLLEPEGVSKVFFTCDSHEQLLPL
                     EQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMND
                     AEMLSMAGKGCIMGSAHQRLKDLHPELEVIGTNADDAVPHYLRKLYLS"
     gene            7778..8677
                     /gene="bioP"
                     /locus_tag="JN001_002962"
     CDS             7778..8677
                     /gene="bioP"
                     /locus_tag="JN001_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter"
                     /protein_id="HAY9054127.1"
                     /translation="MALLIITTILWAFSFSFYGEYLAGHVDSYFAVLVRVGLAALVFL
                     PFLRTRGNSLKTVGLYMLVGAMQLGVMYMLSFRAYLYLTVSELLLFTVLTPLYITLIY
                     DIMNKRRLRWGYAFSALLAVIGAGIIRYDQVTDHFWTGLLLVQLSNITFAIGMVGYKR
                     LMETRPMPQHNAFAWFYLGAFLVAVIAWFLLGNAQKMPQTTLQWGILVFLGVVASGIG
                     YFMWNYGATQVDAGTLGIMNNMHVPAGLLVNLAIWHQQPHWPTLITGALVILASLWVH
                     RKWVAPRSSQTADDRRRDCALSE"
     gene            complement(8565..9518)
                     /gene="metR"
                     /locus_tag="JN001_002963"
     CDS             complement(8565..9518)
                     /gene="metR"
                     /locus_tag="JN001_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator MetR"
                     /protein_id="HAY9054128.1"
                     /translation="MIEVKHLKTLQALRNCGSLAAAAATLHQTQSALSHQFSDLEQRL
                     GFRLFVRKSQPLRFTPQGEILLQLANQVLPQISQALQACNEPQQTRLRIAIECHSCIQ
                     WLTPALENFHKNWPQVEMDFKSGVTFDPQPALQQGELDLVMTSDILPRSGLHYSPMFD
                     YEVRLVLAPDHPLAAKTRITPEDLASETLLIYPVQRSRLDVWRHFLQPAGVSPSLKSV
                     DNTLLLIQMVAARMGIAALPHWVVESFERQGLVVTKTLGEGLWSRLYAAVRDGEQRQP
                     VTEAFIRSARNHACDHLPFVKSAERPTYDAPTVRPGSPARL"
     gene            9754..12015
                     /gene="metE"
                     /locus_tag="JN001_002964"
     CDS             9754..12015
                     /gene="metE"
                     /locus_tag="JN001_002964"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HAY9054129.1"
                     /translation="MTILNHTLGFPRVGLRRELKKAQESYWAGNSTREELLAVGRELR
                     ARHWDQQKQAGIDLLPVGDFAWYDHVLTTSLLLGNVPARHQNKDGSVDIDTLFRIGRG
                     RAPTGEPAAAAEMTKWFNTNYHYMVPEFVKGQQFKLTWTQLLEEVDEALALGHNVKPV
                     LLGPVTWLWLGKVKGEQFDRLSLLNDILPVYQQVLAELEKRGIEWVQIDEPALVLELP
                     QAWLDAYKPAYDALQGQVKLLLTTYFEGVTPNLDTITALPVQGLHVDLVHGKDGVAEL
                     HKRLPSDWLLSAGLINGRNVWRADLTEKYAQIKDIVGKRDLWVASSCSLLHSPIDLSV
                     ETRLDAEVKSWFAFALQKCHELALLRDALNSGDTAALAEWSAPIQARRHSTRVHNPAV
                     EKRLAAITAQDSQRANVYEVRAEAQRARFKLPAWPTTTIGSFPQTTEIRTLRLDFKKG
                     NLDANNYRTGIAEHIKQAIVEQERLGLDVLVHGEAERNDMVEYFGEHLDGFVFTQNGW
                     VQSYGSRCVKPPIVIGDVSRPAPITVEWAKYAQSLTDKPVKGMLTGPVTILCWSFPRE
                     DVSRETIAKQIALALRDEVADLEAAGIGIIQIDEPALREGLPLRRSDWDAYLQWGVEA
                     FRINAAVAKDDTQIHTHMCYCEFNDIMDSIAALDADVITIETSRSDMELLESFEEFDY
                     PNEIGPGVYDIHSPNVPSVEWIEALLKKAAKRIPAERLWVNPDCGLKTRGWPETRAAL
                     ANMVQAAQNLRRG"
     gene            complement(12300..12545)
                     /locus_tag="JN001_002965"
     CDS             complement(12300..12545)
                     /locus_tag="JN001_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HAY9054130.1"
                     /translation="MITETEINVLKVMAEKDINWNWMNLDRTLSIRQIPGFGNVVNIV
                     NKLANEGLVIIEDSGHKSMPHYHVTEKGYNFVKSENK"
     gene            complement(12535..>12913)
                     /locus_tag="JN001_002966"
     CDS             complement(12535..>12913)
                     /locus_tag="JN001_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054131.1"
                     /translation="FNPDLAGGPIENLTTDGVTINREGIAIVEKHIARFGHDPINEVM
                     INRLKDIEKGKIPPEQVDLNFYTHECREYQRYCNLGWETGQPDGDAGYALWNHTHTAT
                     LEDYKLKGELNDLYHQDALDYDN"
BASE COUNT         3051 a         3261 c         3441 g         3160 t
ORIGIN      
        1 ttctacgctg cgtataaatc gcatccatca caaaaattgc cagcgccacc caaataaagg
       61 cgaaggtcac catcttatcg gcacccggtt tttcaccata aaacgtcact gccaacagga
      121 acatcagcgt cgggccaata tactggaaga agcctaacgt ggagagacgc aggcgtgtag
      181 cagctgcggt aaaacacaac agcggtacgg tggtgacaat accggcggcg atcagcagca
      241 aattcagcaa catcgggttt tgccccatat ggctggttga gctgtcggca atagcaaaca
      301 gataaatcgc cgccacgggc agcagccaca tggtttcgat taacatgccg gtttgcgctt
      361 caacggcaat tttcttgcgt accagtccgt agaaggcaaa actaaacgcc agccccagcg
      421 cgatgattgg cagcgaacca aaagtccaca actgaaccaa cacgccacat atcgccagaa
      481 tcaccgccag ccattgcatc cggcggaatc gctcgccgag gaaaatcatc cccagcacaa
      541 tgttcaccag cgggttaata aagtaaccaa ggctcgcttc cagcatatgg tgattgttca
      601 ccgcccagat aaacagtagc cagttgccac caatcagcac ggcagagact gccagcataa
      661 aaattttctg tggcgtctga atcagcgttt ttaaatagga ccactggcgg caaatgctca
      721 tcagcaccac cataaagaaa aacgaccaga tcacgcgatg cgtcaggatc tcatcggcgg
      781 gcacgtagta aatcagcttg aagtatgctg gcgcaatacc ccaaataaaa taagcggcaa
      841 gagcgagtaa tacgccctgc cgcgtttgtt ttgcatccat cgggaatact catttttaat
      901 tggtaacagc agtttacctg cttttatgtc ttcaacctac catataggtg gcggtggcac
      961 tggcaatata aagctgttct tcattgtgta attcaacgcg ggcgacggcg actttattgc
     1021 ctgcacgcaa caggctactg gtagcagtaa aacgctcgcc cctgcctggg cgcagataat
     1081 caacgcgaag atcaatggtc cccatccgcg atagccgctg gcgtagttca tcttcactga
     1141 tggtttcgtg gcgggttaag gtacttccca cgcacaccag accggcggcg acatccagcg
     1201 ccgacgcaat gactccgccg tgcaaaatgc tttgcgccca gttacccacc atcatcggct
     1261 gatttttaaa ggccagctgt gcgaactctt tttcgtaacg ctccagctcc atccctaacg
     1321 cgcggttaaa tggcatgtga taaacaaaca tctcacccac taatttcagg gcttgttcag
     1381 cggtcagtac ggcagacata tcatccttac acttcattgg ttaatgaaat gttgatttta
     1441 tgcttctttg ttgttggttt ctactttagg aagggataac taacggcaat ggagttaagt
     1501 atgtaaaata gcccgcagaa aaacattcac cttatcaata attcgttacg gagaacacga
     1561 ccgatgcgga ctctgcaggg ctggttgttg ccggtgttta tgttgcctat ggcagtatat
     1621 gcacaagagg caacggtgaa agaggtgcat gacgcgccag cggtgcgtgg cagtattatc
     1681 gccaatatgc tgcaggagca tgacaatccg ttcacgctct atccttatga caccaactac
     1741 ctcatctaca cccaaaccag cgatctgaac aaagaagcga ttgccagtta cgactgggcg
     1801 gaaaatgcgc gtaaggatga agtaaagttt cagttgagcc tggcatttcc actgtggcgt
     1861 gggattttag gcccgaactc ggtgttgggt gcgtcttata cgcaaaaatc ctggtggcaa
     1921 ctgtccaata gcgaagagtc ttcaccgttt cgtgaaacca actacgaacc gcaattgttc
     1981 ctcggttttg ccaccgatta ccgttttgca ggttggacgc tgcgcgatgt ggagatgggg
     2041 tataaccacg actctaacgg gcgttccgac ccgacctccc gcagctggaa ccgcctttat
     2101 actcgcctga tggcagaaaa cggtaactgg ctggtagaag tgaagccgtg gtatgtggtg
     2161 ggtaatactg acgataaccc ggatatcacc aaatatatgg gttactacca gcttaaaatc
     2221 ggctatcacc tcggtgatgc ggtgttgagt gcgaaaggac agtacaactg gaataccggt
     2281 tacggcggcg cggagttagg cttaagttac ccgatcacca aacatgtgcg cctttatact
     2341 caggtttaca gcggctatgg cgaatcgctc atcgactata acttcaacca gacccgtgtc
     2401 ggtgtaggag ttatgctaaa cgacttgttt tgatgaacgg ttgagtggtt ggcaaatctg
     2461 gaacccagca tccaggatta ccctctcaga gactaaaagc attgcagttt ctcgcgcagg
     2521 cgctgaaaat agcgcctgtt tttatttcag gcaatcgggg tgaatgtggc gcaggcggaa
     2581 gtgttgaatc tggagtccgg agctaaacag gttttacaag aaacctttgg ctaccaacag
     2641 tttcgccccg gccaggaaga aattatcgac actgtgcttt ccggtcgcga ttgcctggtc
     2701 gtcatgccca ccggtggcgg aaaatccctt tgctatcaaa ttcctgcctt attgctaaac
     2761 ggccttaccg tggttgtttc accgctgatt tcgttgatga aagatcaggt ggatcaactg
     2821 caagccaacg gcgtggcggc ggcgtgcctt aactcgacgc aaacccgcga gcagcaactt
     2881 gaagtgatga caggctgccg caccgggcaa attcgtctgc tttatatcgc cccggaacgc
     2941 ctgatgctgg ataactttct tgagcatctg gcgcactgga atccggtgtt attagccgtt
     3001 gatgaagcgc actgtatctc ccaatggggc cacgatttcc gcccggaata tgccgcgctt
     3061 ggtcagttac gccagcgttt cccgaccctg ccgtttatgg cgctgactgc cacagccgac
     3121 gacaccacgc gccaggatat cgtgcgcttg ctggggctga acgatccgct gattcaaatc
     3181 agcagttttg accgtccgaa tattcgctac atgctgatgg agaagttcaa accgctcgat
     3241 cagttgatgc gctacgtgca ggaacagcgc ggtaagtcag gcattatcta ctgcaacagc
     3301 cgcgcgaaag tagaagacac cgctgcgcgc ctgcaaagca agggaattag cgcggcggcc
     3361 tatcatgctg ggctggaaaa taatgttcgc gccgacgtgc aggaaaaatt tcagcgcgat
     3421 gacctgcaaa ttgtggtggc gacggtggcg ttcggcatgg gcatcaataa accaaacgtt
     3481 cgcttcgtgg tccactttga tattccgcgc aatatcgaat cctattatca ggaaaccggt
     3541 cgcgccgggc gtgatggcct gcccgcggaa gcgatgctgt tttacgatcc ggccgatatg
     3601 gcgtggctgc gccgttgcct ggaagagaag ccgcaggggc agttacagga tatcgaacgt
     3661 cataaactca atgcgatggg cgcttttgcc gaagcgcaaa cttgccgtcg tctggtattg
     3721 ctgaactatt ttggcgaagg gcggcaagag ccgtgcggga actgcgatat ctgcctcgat
     3781 ccgccgaaac agtacgacgg ttcaaccgat gctcagattg ccctttccac cattggtcgt
     3841 gtgaatcagc ggtttgggat gggttatgtg gtggaagtga ttcgtggtgc taataaccag
     3901 cgtatccgcg actatggtca tgacaaactg aaagtctatg gcatgggccg tgataaaagc
     3961 catgaacatt gggtgagcgt gatccgccag ctgattcacc tcggcctggt gacgcaaaat
     4021 attgcccagc attctgccct acaactgaca gaggccgcgc gcccggtgct gcgcggcgaa
     4081 tcctctttgc aacttgccgt gccgcgtatc gtggcgctca aaccgaaagc gatgcagaaa
     4141 tcgttcggcg gcaactatga tcgcaaactg ttcgccaaat tacgcaaact gcgtaaatcg
     4201 attgccgatg aaagtaatgt cccgccgtac gtggtgttta acgacgcaac cttgattgag
     4261 atggctgaac agatgccgat caccgccagc gaaatgctca gcgttaacgg cgttgggatg
     4321 tgcaagctgg aacgctttgg taaaccgttt atggcgctga ttcgtgcgca tgtcgatggc
     4381 gacgacgaag agtagtcagc agcataaaaa agtgccagga tgaagactcc gtaaacgttt
     4441 cccccgcgag tcaaatgtat gttgatgtta tttctcaccg tcgccatggt gcacattgtg
     4501 gcgcttatga gccccggtcc cgatttcttt tttgtctctc agaccgctgt cagtcgttcc
     4561 cgtaaagaag cgatgatggg cgtgctgggt attacctgcg gcgttatggt ttgggcaggg
     4621 attgcgttgc ttggcctgca tttgattatc gaaaaaatgg cctggctgca tacgctgatt
     4681 atggttggcg gtggcctgta tctctgctgg atgggttacc agatgctacg cggtgcactg
     4741 aaaaaagagg ctgtatctgc gcctgcacca cagattgagc tggcgaaaag cgggcgcagt
     4801 ttcctgaaag gtttactgac caatctcgct aatccgaaag cgattatcta ctttggctcg
     4861 gtgttctcat tgtttgtcgg tgataacgtt ggcactaccg cgcgctgggg catttttgcg
     4921 ctgatcattg tcgaaacact ggcgtggttt accgtcgttg ccagcctgtt tgccctgccg
     4981 caaatgcgcc gtggttatca acgtctggcg aagtggattg atggttttgc cggggcgtta
     5041 tttgccggat ttggcattca tttgattatt tcgcggtgat gccagacgcg tcttcagagt
     5101 aagtcggata aggcgtttac gccgcatccg acattatttt tcacgcatgc ctcgccgatg
     5161 ctaacagcgc tcccaccagc ataaacaacg agccgaaaat cttattcagc gccttcatct
     5221 gctttggtcc tttaatccat agagcaatcc gttgagcaag ggtggcgtaa ccgatcatca
     5281 caataatatc gactacaata gtggtgacgc cgagcacgat atactgcatc agttgcggct
     5341 gctgtggcat gatgaattgc ggaaatagcg ccgccagaaa cacaatactt ttgggattgg
     5401 tgagattcac aaaaactgcg cgctggaaca aatgtcgacg cgattgagta gaggccagcg
     5461 atttaaggtc aattgcacca gcggcgcgcc actgctggat tcccagccaa atcaagtaag
     5521 ccgcgcctgc ccacttcaac acttcaaacg caatcactga gcgggaaaat agcgtcccca
     5581 aacccacgcc aaccagcaca atatgaatcg ccagtccggt ctgaagccca gcaatagacg
     5641 ccaccgcgcc gcgataaccg tggttgagcg aggtggtcat agtgttgatt gcaccagagc
     5701 ctggcgacag gcttaaaatg atcgatgtca gcaggtaggc aaaccaccat tctaaggtca
     5761 tgatgaactc ccggtgtgtc tatttttgtg ccacaatacg ctactgtcgc agcgttgtgt
     5821 caggcacgct aaaaaaaacg attttacgtg gtttaagagg cagattaccc gatgtttcag
     5881 cagcaaaaag actgggaaac aagagaaaac gcgtttgctg cttttaccat gggaccgctg
     5941 actgatttct ggcgtcagcg tgatgaagca gagtttactg gtgtggatga cattccggtg
     6001 cgctttgtcc gttttcgcgc acagcaccat gaccgggtgg tagtcatctg cccggggcgt
     6061 attgagagct acgtaaaata tgcggaactg gcctatgacc tgttccattt ggggtttgat
     6121 gtcttaatca tcgaccatcg cgggcaggga cgttccggtc gcctgttagc cgatccgcat
     6181 ctcgggcatg ttaatcgctt taatgattat gttgatgatc tggcggcatt ctggcagcag
     6241 gaggtccagc ccggtccgtg gcgtaaacgc tatatactgg cacattcgat gggcggtgcg
     6301 atctccacat tatttctgca acgccatcca ggtgtatgtg acgccattgc gctaactgcg
     6361 ccaatgtttg ggatcgtgat tcgtatgccg tcatttatgg cacggcagat cctcaactgg
     6421 gccgaagcgc atccacgttt ccgtgatggc tatgcaatag gcaccgggcg ctggcgcgcg
     6481 ttgccgtttg ctatcaacgt actgacccac agcagacagc gatatcgacg taacttacgc
     6541 ttctatgctg atgacccaac gattcgcgtc ggtgggccga cctaccattg ggtacgcgaa
     6601 agtattctgg ctggcgaaca ggtgttagcc ggtgcgggtg atgacgccac gccaacgctt
     6661 ctcttgcagg ctgaagagga acgcgtggtg gataaccgca tgcatgaccg tttttgtgaa
     6721 ctccgcaccg ccgcgggcca tcctgtcgaa ggaggacggc cgttggtaat taaaggtgct
     6781 taccatgaga tcctttttga aaaggacgca atgcgctcag tcgcgctcca cgccatcgtt
     6841 gattttttca acaggcataa ctcacccagc ggaaaccgct ctacagaggt ttaaatttct
     6901 tatgtaccag gttgttgcgt ctgatttaga tggcacgtta ctttctcccg accatacgtt
     6961 atccccttac gccaaagaaa ctctgaagct gctcaccgcg cgcggcatca actttgtgtt
     7021 tgcgaccggt cgtcaccacg ttgatgtggg gcaaattcgc gataatctgg agattaagtc
     7081 ttacatgatt acctccaatg gtgcgcgcgt tcacgatctg gatggtaatc tgatttttgc
     7141 tcataacctg gatcgcgaca ttgccagcga tctgtttggc gtagtcaacg acaatccgga
     7201 catcattact aacgtttatc gcgacgacga atggtttatg aatcgccatc gcccggaaga
     7261 gatgcgcttt tttaaagaag cggtgttcaa atatgcgctg tatgagcctg gattactgga
     7321 gccggaaggc gtcagcaaag tgttcttcac ctgcgattcc catgaacaac tgctgccgct
     7381 ggagcaggcg attaacgctc gttggggcga tcgcgtcaac gtcagtttct ctaccttaac
     7441 ctgtctggaa gtgatggcgg gcggcgtttc aaaaggccat gcgctggaag cggtggcgaa
     7501 gaaactgggc tacagcctga aggattgtat tgcgtttggt gacgggatga acgacgccga
     7561 aatgctgtcg atggcgggga aaggctgcat tatgggcagt gcgcaccagc gtctgaaaga
     7621 ccttcatccc gagctggaag tgattggtac taatgccgac gacgcggtgc cgcattatct
     7681 gcgtaaactc tatttatcgt aatcgttctt tatttggtca gttgtcaacc tgatacttcg
     7741 ctacaatgga tactcgttaa tcaaagagtt ttccattgtg gcgctactta tcatcaccac
     7801 gattctgtgg gccttctcct ttagctttta tggcgagtac cttgcggggc acgtcgatag
     7861 ctattttgcg gtgctggtgc gcgttggcct ggcggcactc gtttttctgc cgtttctgcg
     7921 tacccgtggc aatagcctga aaacagtcgg cctgtatatg ctggtgggcg cgatgcagct
     7981 cggcgtgatg tatatgctga gtttccgcgc ttatctctat ctgacggttt ccgaactgct
     8041 gctgttcacc gtactgacgc cgctctacat cacgctgatt tatgacatca tgaataagcg
     8101 ccgtctgcgc tggggatatg cttttagtgc cttgttggcg gtgattggtg ccgggattat
     8161 tcgctatgat caggtcaccg accatttctg gactggcttg ttgctggtgc aactctccaa
     8221 tatcactttt gccatcggca tggtgggtta caaacgcctg atggaaactc gcccgatgcc
     8281 gcagcataac gcctttgcgt ggttctatct tggcgcgttc ctggtggcgg taattgcatg
     8341 gttcttgctg ggaaatgcgc agaaaatgcc gcaaaccacg ttgcaatggg gcattctggt
     8401 gtttcttggc gtggtggctt ccgggattgg ctactttatg tggaactacg gcgcgacgca
     8461 ggtggacgcc ggaacgctgg gaattatgaa taatatgcac gttccggcag ggctgctggt
     8521 aaacctggct atctggcacc aacagccgca ctggccaacg ttgattacag gcgcgctggt
     8581 gatcctggcc tcactgtggg tgcatcgtaa gtgggtcgct ccgcgctctt cacaaacggc
     8641 agatgatcgc aggcgtgatt gcgcgctgag cgaataaacg cttccgtaac tggctgacgc
     8701 tgctcgccat cgcgcacggc ggcgtacagt cggctccaca agccttcgcc cagggttttg
     8761 gtcaccacca gaccctggcg ctcaaaactc tctactaccc aatgcggtag cgcggcaata
     8821 cccatccgcg cggcaaccat ctgaatcaac aataaggtgt tatcgacgct tttcagtgac
     8881 ggactgacgc ctgccggctg aagaaaatgc cgccagacat ccagtcgact acgctgcacc
     8941 ggataaatta atagcgtctc gctggcgaga tcttccggtg taatacgcgt ttttgccgcc
     9001 agtggatggt caggtgctaa caccagacgc acttcatagt cgaacatcgg cgaataatgc
     9061 agaccactgc gcggcagaat atcggacgtc attaccagat ccagctctcc ctgttgcaag
     9121 gcgggctgcg ggtcaaatgt cacgcccgat ttaaagtcca tctcgacctg cggccagttc
     9181 ttatggaaat tttctaacgc gggcgtcagc cactgtatac agctatggca ctcaatggca
     9241 atgcgcagac gcgtctgctg cggttcattg caggcttgca gtgcctggct aatttgtggc
     9301 agcacctggt ttgccagttg caacaggatt tctccctgcg gtgtaaagcg aagcggctgg
     9361 cttttacgca caaatagccg gaagccaagg cgttgttcca gatcgctaaa ctggtgagac
     9421 agggcggatt gcgtttgatg caacgtcgcc gcagcggctg cgagtgagcc gcagttccgc
     9481 aacgcttgta gcgttttcag atgttttact tcgatcatga aagtccttca cttcggcatg
     9541 aataatttgc gcttgaggaa tatacagtaa ccgccaatta tggatgtgta aacatctgga
     9601 cggctaaaat ccttcgtctt ttaaatttat ggtgcgttgg ctgcgtttct ccaccccggt
     9661 cacttacttc agtaagctcc cggggatgaa taaacttgcc gccttcccta aattcaaaat
     9721 ccataggatt tacatataat tagaggaaga aaaatgacaa tattgaatca caccctcggt
     9781 ttccctcgcg ttggcctgcg tcgcgagctg aaaaaagcgc aagagagtta ttgggcaggg
     9841 aactccacgc gtgaagaact gctggcggta gggcgtgaat tgcgtgctcg tcactgggat
     9901 caacaaaagc aagcgggtat cgacctgctg ccggtgggcg attttgcctg gtacgatcat
     9961 gtactgacca ccagtctgct gctgggtaac gttccggcgc gtcatcagaa caaagatggt
    10021 tcggtagata ttgacaccct gttccgtatt ggtcgtggac gtgcgccgac tggcgaacct
    10081 gcggcggcag cggaaatgac caaatggttt aacaccaact atcactacat ggtgccggaa
    10141 ttcgttaaag gccaacagtt caaactgacc tggacgcagc tgctggagga agtggacgag
    10201 gcgctggcgc tgggccacaa cgttaagcct gtgctgctgg ggccggttac ctggctgtgg
    10261 ctggggaaag tgaaaggtga acagtttgac cgcctgagcc tgctgaacga cattctgccg
    10321 gtttatcagc aagtgctggc agaactggag aaacgcggca tcgagtgggt acagattgat
    10381 gaacccgcgc tggtactgga actaccacag gcgtggctgg acgcatacaa acccgcttac
    10441 gacgcgctcc agggacaggt gaaactgctg ctgactacct attttgaagg cgttacgcca
    10501 aatctcgaca cgattactgc gctgcctgtt cagggactgc atgtggacct tgtacatggt
    10561 aaagatggcg ttgctgaact gcacaagcgc ctgccttctg actggctgct gtctgcggga
    10621 ctgatcaatg gtcgtaacgt ctggcgcgcc gatcttactg agaaatatgc gcaaattaag
    10681 gacattgtcg gcaaacgtga tttgtgggtg gcatcttcct gctcgttgct gcacagcccc
    10741 atcgacctga gcgtggaaac gcgtcttgat gcagaagtga aaagctggtt tgccttcgcc
    10801 ttacaaaaat gccatgaact ggcactgctg cgcgatgcgc tgaacagtgg tgacacggca
    10861 gctctggcag agtggagcgc cccaattcag gcgcgtcgtc actctactcg tgtacataat
    10921 ccggcggtag aaaagcgtct ggcggcgatc accgcccagg acagccagcg tgcgaatgtc
    10981 tatgaagtgc gtgctgaagc ccagcgtgcg cgttttaaac tgccagcgtg gccgaccacc
    11041 acgattggtt ccttcccgca aaccacggaa attcgtaccc tgcgtctgga tttcaaaaag
    11101 ggcaatctcg acgccaacaa ctaccgcacg ggcattgcgg aacatatcaa gcaggccatt
    11161 gttgagcagg aacgtttggg actggatgtg ctggtacatg gcgaggccga gcgtaatgac
    11221 atggtggaat actttggcga gcacctcgac ggatttgtct ttacgcaaaa cggttgggta
    11281 cagagctacg gttcccgctg cgtgaagcca ccgattgtta ttggtgacgt tagtcgcccg
    11341 gcaccgatta ccgtggagtg ggcgaagtat gcgcaatctc tgactgataa accggtgaaa
    11401 gggatgctga ctggcccggt gaccattctc tgctggtcgt tcccgcgtga agatgtcagc
    11461 cgtgaaacca tcgccaaaca aattgcgctg gcgctgcgtg atgaagtggc ggacctggaa
    11521 gccgcaggaa ttggcatcat ccagattgat gaaccggcgc tgcgcgaagg tttaccgctg
    11581 cgtcgtagcg actgggatgc atatctccag tggggcgtgg aggccttccg tatcaacgcc
    11641 gccgtggcga aagatgacac acaaatccac actcacatgt gttattgcga gttcaacgac
    11701 atcatggatt ccattgcggc actggatgca gacgtcatca ccatcgaaac ctcgcgttcc
    11761 gacatggagt tgctggagtc gtttgaagag tttgattatc cgaatgaaat cggtccaggc
    11821 gtctatgaca ttcactcgcc aaacgtaccg agcgtagaat ggattgaagc cttgctgaag
    11881 aaagcggcaa aacgcattcc ggcagagcgc ctgtgggtca acccggactg tggcctgaaa
    11941 acgcgcggct ggccagaaac ccgcgcggca ctggcgaaca tggtgcaggc ggcgcagaat
    12001 ttgcgtcggg gatgatgaat attaacgagt cactgtaaat tgcagtacga tgaaagaggc
    12061 aaaactgcct gataccaggc ctacataatt tatgcaattt attgaatttt tgagttttgt
    12121 tggccggaca aggcgttcac gccgcatccg gcatgaacaa cgcgcacttt gccaataatc
    12181 tgatggcttc catcaccgga agccattttg ctatctgcgc ccgttcagat acagaaataa
    12241 ccgaatcatt tttacgcaaa atataatcct gagcgatttg ttcagtaatc aacgctacgt
    12301 tatttattct cacttttcac gaaattgtat cccttttcag taacgtggta gtgaggcata
    12361 gacttatgtc cgctatcctc aataataacc aaaccctcgt tagctaattt gttaacaatg
    12421 ttaacaacat taccgaatcc tggaatttgc cttatggata gtgtgcgatc gagattcatc
    12481 cagttccagt ttatatcttt ctcagccata actttcagta cgttaatttc agtttcagtt
    12541 atcatagtca agtgcatcct ggtggtataa gtcattaagt tctcccttaa gtttataatc
    12601 ttctagagta gcagtatgcg tatgattcca gagtgcatag cctgcgtcac catcaggttg
    12661 tcctgtttcc caaccaagat tacagtaacg ctgatattcc cgacactcat gagtatagaa
    12721 gttaagatct acttgttctg gggggatttt tcctttctca atgtctttca gtctattgat
    12781 catcacttca tttatagggt catgaccaaa tctggctatg tgtttttcaa caatagcgat
    12841 accttccctg ttgattgtta cgccatctgt cgtcagattt tctattggac caccggcaag
    12901 gtcgggatta aat
//
LOCUS       DADMJE010000119        12908 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.120, whole genome shotgun sequence.
ACCESSION   DADMJE010000119 DADMJE010000000
VERSION     DADMJE010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12908
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.120"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            13..1566
                     /locus_tag="JN001_002967"
     CDS             13..1566
                     /locus_tag="JN001_002967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000807159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HAY9054132.1"
                     /translation="MSEFARCHYGYIQIPPVTTFRADGPETPEEEKGYWFHAYQPEDL
                     CTIHNPMGDLQDFIALVKDAKKFGIDIIPDYTFNFMGIGGSGKNDLDYPSADIRAKIS
                     KDIESGIPGYWQGQVLIPFIKDPVTKERKQIHPEDIHLTAKDFEASKDNISKDEWENL
                     HALKEKRLNGMPKTTPKSGQVIMLQNQYVREMRKYGVRGLRYDAAKHSKHEQIERSIT
                     PPLKNYNERLHNTNLFNPKYQKKAVMNYMEYLVTCQLDEQQMSSLLYERDDLSAIDFS
                     LLMKTIKAFSFGGDLQTLASKPGSTISSIPSERRILININHDFPNNGNLFNDFLFNHQ
                     QDEQLAMAYMAALPFSRPLVYWDGQVLKSTTEIKNYDGSTRVGGEAWLNKGCSTYQQL
                     YNEFHALYIDKAGIWSAFEGVFATKNVLAFSRGDSVNINHSPHDGLVIINKGNEEVEG
                     TWPNKLQPGIYKNMGSNSVNIIINNTRKIIPPGKVFTLRGGTLNINIPGRSALLLGKT
                     GEPPNYLYL"
     gene            1902..2879
                     /gene="csiD"
                     /locus_tag="JN001_002968"
     CDS             1902..2879
                     /gene="csiD"
                     /locus_tag="JN001_002968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon starvation induced protein CsiD"
                     /protein_id="HAY9054133.1"
                     /translation="MNALIAVQNNAVDSGQDYSGFTLIPSAQSPRLLELTFTEQTTKQ
                     FLEQVAEWPVQALEYKSFLRFRVGKILDDLCANQLQPLLLKPLLNRAEGALLINAVGI
                     DDVAQADEMVKLATAVAHLIGRSNFDAMSGQYYARFVVKNVDNSDSYLRQPHRVMELH
                     NDGTYVEEITDYVLMMKIDEQNMQGGNSLLLHLDDWEHLDHYFRHPLARRPMRFAAPP
                     SKNVSKDVFHPVFDVDQQGRPVMRYIDQFVQPKDFEEGVWLSELSDAIETSKGILSVP
                     VPVGKFLLINNLFWLHGRDRFTPHPDLRRELMRQRGYFAYATHHYQTHQ"
     gene            2899..4167
                     /gene="lhgO"
                     /locus_tag="JN001_002969"
     CDS             2899..4167
                     /gene="lhgO"
                     /locus_tag="JN001_002969"
                     /EC_number="1.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417146.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-2-hydroxyglutarate oxidase"
                     /protein_id="HAY9054134.1"
                     /translation="MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESGPACHQTG
                     HNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNDIRYDNCGKMLIATSDLEMERM
                     RALWERTAANGIEREWLNAEELREREPNITGLGGIFVPSSGIVSYREVTAAMAKIFQA
                     RGGEIIYNAEVSALSEHKNGVVVRTRQGGEYEASTLISCSGLMANRLVKMLGLEPGFI
                     ICPFRGEYFRLAPEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKR
                     EGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGLGEMKNSLCKSGYLRLVQKYCPRLS
                     LSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCNAPSPAATSAIPIGAHIVSK
                     VQTLLASQSNPGRTLRATRSVDALHAAFNQ"
     gene            4190..5625
                     /gene="gabD"
                     /locus_tag="JN001_002970"
                     /pseudo
     CDS             4190..5625
                     /gene="gabD"
                     /locus_tag="JN001_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311549.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent succinate-semialdehyde
                     dehydrogenase"
     gene            5639..6905
                     /gene="gabT"
                     /locus_tag="JN001_002971"
                     /pseudo
     CDS             5639..6905
                     /gene="gabT"
                     /locus_tag="JN001_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417148.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4-aminobutyrate--2-oxoglutarate transaminase"
     gene            7143..8504
                     /gene="gabP"
                     /locus_tag="JN001_002972"
     CDS             7143..8504
                     /gene="gabP"
                     /locus_tag="JN001_002972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005114089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GABA permease"
                     /protein_id="HAY9054135.1"
                     /translation="MGQSSQPHELGGGLKSRHVTMLSIAGVIGASLFVGSSVAIAEAG
                     PAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFW
                     VLVIPLEANIAAMILHSWVPGIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKV
                     IAILAFIFLGAVAISGFYPYAEVSGISRLWDSGGFMPNGFGAVLSAMLITMFSFMGAE
                     IVTIAAAESDTPEKHIVRATNSVIWRISIFYLCSIFVVVALIPWNMPGLKAVGSYRSV
                     LELLNIPHAKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPAVMGKINRSKTP
                     YVAVLLSTGAAFLTVVVNYYVPAKVFKFLIDSSGAIALLVYLVIAVSQLRMRKILRAE
                     GSEIRLRMWLYPWLTWLVIGFITFVLVVMLFRPAQQLEVISTDLLAIGIICTVPIMAA
                     GIS"
     gene            8563..9225
                     /gene="csiR"
                     /locus_tag="JN001_002973"
     CDS             8563..9225
                     /gene="csiR"
                     /locus_tag="JN001_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator CsiR"
                     /protein_id="HAY9054136.1"
                     /translation="MTITSLDGYRWLKNDIIRGNFQPDEKLRMSLLTSRYALGVGPLR
                     EALSQLVAERLVTVVNQKGYRVASMSEQELLDIFDARANMEAMLVSLAIARGSDEWEA
                     DVLAKAHLLSKLEACDASEKMLDEWDLRHQAFHTAIVAGCGSHYLLQMRERLFDLAAR
                     YRFIWLRRTVLSVEMLEDKHDQHQTLTAAVLARDTARASELMRQHLLTPIPIIQQAMA
                     GN"
     gene            complement(9226..9675)
                     /gene="kbp"
                     /locus_tag="JN001_002974"
     CDS             complement(9226..9675)
                     /gene="kbp"
                     /locus_tag="JN001_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium binding protein Kbp"
                     /protein_id="HAY9054137.1"
                     /translation="MGLFNFVKDAGEKLWDAVTGQHDKDDQAKKVQEHLSKTGIPDAD
                     KVNIQIADGKATVTGDGLSQEAKEKILVAVGNISGIASVDDQVKTATPATASQFYTVK
                     SGDTLSAISKQVYGNANLYNKIFEANKPMLKSPDKIYPGQVLRIPEE"
     gene            complement(9759..9917)
                     /locus_tag="JN001_002975"
     CDS             complement(9759..9917)
                     /locus_tag="JN001_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaE/Pmp3 family membrane protein"
                     /protein_id="HAY9054138.1"
                     /translation="MGFWRIVITIILPPLGVLLGKGFGWAFIINILLTLLGYIPGLIH
                     AFWVQTRD"
     gene            10100..10399
                     /locus_tag="JN001_002976"
     CDS             10100..10399
                     /locus_tag="JN001_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9054139.1"
                     /translation="MTELAQLQASAEQAAALLKAMSHPKRLLILCMLSGSPGTSAGEL
                     TRITGLSASATSQHLARMRDEGLIDSQRDAQRILYSIKNEAVNAIIATLKNVYCP"
     gene            10409..10933
                     /gene="ygaP"
                     /locus_tag="JN001_002977"
     CDS             10409..10933
                     /gene="ygaP"
                     /locus_tag="JN001_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiosulfate sulfurtransferase YgaP"
                     /protein_id="HAY9054140.1"
                     /translation="MALTTISPHDAQELIARGAKLIDIRDADEYLREHIPEADLAPLS
                     VLEQSGLPPKLRREQIIFHCQAGKRTSNNADKLAAIAAPAEIFLLEDRIDGWKRAGLP
                     VAVNKSQPLPLMRQVQIAAGGLILIGVVLGYTVNSGFFLLSGFVGAGLLFAGISGFCG
                     MARLLDKMPWNQRA"
     gene            complement(10980..11384)
                     /gene="stpA"
                     /locus_tag="JN001_002978"
     CDS             complement(10980..11384)
                     /gene="stpA"
                     /locus_tag="JN001_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein StpA"
                     /protein_id="HAY9054141.1"
                     /translation="MSVMLQSLNNIRTLRAMAREFSIDVLEEMLEKFRVVTKERREEE
                     EQQQRELAERQEKISTWLELMKADGINPEELLGNSSAAAPRAGKKRQPRPAKYKFTDV
                     NGETKTWTGQGRTPKPIAQALAEGKSLDDFLI"
     gene            12051..12500
                     /gene="alaE"
                     /locus_tag="JN001_002979"
     CDS             12051..12500
                     /gene="alaE"
                     /locus_tag="JN001_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-alanine exporter AlaE"
                     /protein_id="HAY9054142.1"
                     /translation="MFSPQSRLRHAVADTFAMVVYCSVVNMCIEVFLSGMSFEQSFYS
                     RLVAIPVNILIAWPYGMYRDLFMRAARKVSPSGWIKNLADILAYVTFQSPVYVAILLV
                     VGADWHQIMAAVSSNIVVSMLMGAVYGYFLDYCRRLFKVSRYQQVKA"
     gene            complement(12537..12881)
                     /locus_tag="JN001_002980"
     CDS             complement(12537..12881)
                     /locus_tag="JN001_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgaC family protein"
                     /protein_id="HAY9054143.1"
                     /translation="MYLRPDEVARVLEKVGFTVDVVTQKAYGYRRGENYVYVNREARM
                     GRTALVIHPTLKERSSTLAEPASDIKTCDHYQQFPLYLAGERHEHYGIPHGFSSRVAL
                     ERYLNGLFGEAS"
BASE COUNT         3219 a         3164 c         3294 g         3231 t
ORIGIN      
        1 atcagggaaa atatgtctga gtttgcacgt tgccattatg ggtatataca aatccctcca
       61 gtgacaactt tccgcgccga cggaccagaa actcccgaag aagaaaaagg ttactggttt
      121 catgcttatc aacccgaaga tctttgtacc atccataacc caatgggaga tttgcaggat
      181 tttatcgcat tggttaaaga tgctaaaaaa tttggtatcg atatcattcc tgattataca
      241 tttaacttta tgggaatcgg gggtagtggt aaaaatgacc tggattatcc ctctgctgat
      301 atacgagcga agatcagtaa agatatagaa agcggtatcc ctggctattg gcaaggtcag
      361 gttttgattc cattcattaa agatccagta acaaaagaac gtaaacaaat ccatccagaa
      421 gatatacatc tcactgcaaa agacttcgaa gcaagtaaag ataacatctc taaggatgaa
      481 tgggaaaacc tccatgcatt aaaagaaaag cgtttaaatg gaatgcctaa aacaacaccc
      541 aaaagtggcc aggttattat gttgcaaaat caatacgttc gagaaatgcg aaaatatggc
      601 gtacgaggtt tacgttatga tgcggcaaaa cactcaaaac atgaacaaat agagaggtcg
      661 ataaccccac cgcttaaaaa ttataatgag cggttacaca atactaattt atttaaccca
      721 aaatatcaaa aaaaagccgt tatgaattac atggaatacc tggtaacttg tcagttggat
      781 gaacaacaaa tgtcatcact gctttatgag agagatgatt taagtgccat tgatttttct
      841 ttactcatga aaacgataaa agccttttca tttggtggag atctccaaac ccttgcatca
      901 aaaccgggtt ccacaatctc aagtatccca tcagaaagac ggatattgat taacattaac
      961 cacgattttc ctaacaatgg taatcttttc aatgactttc tatttaacca tcaacaagat
     1021 gaacaattag caatggcata tatggccgct ctcccgttca gcagaccttt agtttactgg
     1081 gatggccaag tattaaaatc aacgactgaa attaaaaatt atgatgggtc cacgcgtgtc
     1141 ggcggtgagg cgtggcttaa taaaggttgc tctacctatc agcagctcta caatgaattc
     1201 cacgcattat atatagataa agcaggaata tggagcgcat ttgagggtgt atttgcaact
     1261 aaaaacgttc tggcctttag tcgtggggat tctgtgaaca ttaatcactc tcctcatgat
     1321 gggctagtta taataaataa aggaaacgaa gaagttgaag gtacctggcc taacaaattg
     1381 caacctggaa tatacaaaaa catggggagt aatagcgtta acattattat taataatacc
     1441 cgaaaaatta tcccccctgg taaagtattt acgcttagag gcggaactct aaatatcaat
     1501 attcctgggc gtagcgctct tcttttaggg aaaacaggag aaccgccgaa ctatctctat
     1561 ttataattta atgttatatc tgccccgata aaacggggca gataatatgt ttagtttact
     1621 aacggtcatt ttgcagtgaa gccatttact gttttttatc gaccagataa tctgttctct
     1681 aatgttaact ccccctaacc tgttgcttta gttattcatt tcctgtctca ctttgcctta
     1741 ataccctacg ttaaatgtta ctaatttgtt gtttttgatc acaataagaa aacaatatgt
     1801 cgcttttgtg cgcatttttc agaaatgtag atatttttag attatggcta cgaaatgagc
     1861 atcgccatgt caccctacat ctcataagag gatcgcttct gatgaatgca ctgatcgccg
     1921 tacaaaataa cgctgtcgat tcaggccagg actatagcgg attcactctc atcccgtcgg
     1981 cgcaatcccc gcgtctgctg gaactcacct tcaccgaaca gacgaccaaa cagtttctcg
     2041 aacaggttgc cgaatggccc gtgcaggcgc tggagtacaa atcgtttctg cgttttcggg
     2101 taggcaaaat tcttgacgat ctgtgtgcga atcagctgca accattgctg ttgaagcccc
     2161 tgctaaaccg tgctgaaggt gcgctgttga tcaatgcggt gggtatcgat gatgtggcgc
     2221 aggcagatga gatggtgaag ctggcaacgg cggtagcgca tctgattggt cgctcaaatt
     2281 tcgatgcgat gagcggtcag tattacgcgc gtttcgtggt gaaaaatgtc gataactcag
     2341 acagctatct gcgtcagccg caccgcgtga tggaactgca caacgacggc acgtatgtcg
     2401 aagagatcac cgattacgtg ctgatgatga aaatcgatga gcaaaacatg cagggtggaa
     2461 attcgttgct gctgcatctc gatgactggg aacatctgga ccactatttc cgccatccac
     2521 tggcgcgtcg cccgatgcgc tttgccgcgc cgccgagcaa aaacgtcagc aaagatgttt
     2581 tccatccagt gttcgacgtt gatcaacagg gtcgcccggt gatgcgctat atcgaccagt
     2641 tcgtccagcc aaaagatttt gaagaaggcg tgtggttgag cgagctttcc gatgccattg
     2701 aaaccagcaa aggcattctt tctgtacccg ttcccgttgg caaattcctg ttgataaaca
     2761 acctgttctg gctgcacggt cgcgaccgct ttactccgca cccggatctg cgccgtgaac
     2821 tgatgcgtca gcgtggctat ttcgcttacg ccactcacca ctaccagacg catcagtaag
     2881 cgcaaaggaa ttgagcggat gtatgatttt gtgattattg gcggcggcat catcggcatg
     2941 tcgaccgcca tgcaactgat tgatgtttat ccggatgccc gcattgcgtt gctggaaaaa
     3001 gagtccggcc cggcctgtca ccagacgggc cacaacagcg gcgtgatcca tgccggggtc
     3061 tattacacgc ccggcagcct gaaggcgcag ttttgcctgg cgggaaaccg cgccaccaaa
     3121 gccttttgcg atcaaaacga cattcgctat gacaactgcg gcaagatgct gatcgccacg
     3181 tccgatctcg aaatggaacg gatgcgcgcg ttgtgggaac gcacggcggc gaacggtatc
     3241 gagcgcgagt ggttaaacgc cgaggaactg cgcgagcgcg aaccgaatat caccgggctc
     3301 ggcggcattt ttgtgccgtc cagcggcatt gtcagctatc gcgaagtcac agcggcaatg
     3361 gcaaaaatct tccaggccag aggcggtgag attatttata acgccgaagt cagcgccctc
     3421 agtgagcata aaaacggcgt ggtcgtccga acccgtcagg gcggcgaata tgaagcatcg
     3481 acgctgatta gctgttccgg gctgatggct aaccggctgg tgaaaatgct cggcctcgaa
     3541 ccgggtttta ttatctgccc gttccgtggc gagtatttcc gccttgcgcc ggagcataac
     3601 cagattgtta accatctgat ttaccccatc cctgacccgg caatgccgtt tttgggcgtg
     3661 catctcaccc gcatgatcga cggcagcgtg accgtcgggc caaacgcggt gctggctttt
     3721 aaacgcgaag gctatcgcaa gcgcgacttc tcatttagcg acacgctgga aattttaggc
     3781 tcgtcgggga ttcgccgggt gctgcaaaac catctacgct caggactggg cgagatgaaa
     3841 aactcgctgt gcaaaagcgg ctatctgcgg ctggtgcaaa agtattgtcc ccggctttcg
     3901 ttaagcgatc tccagccctg gcccgccggt gtgcgggcgc aggcggtatc gccggacggc
     3961 aagctgattg acgattttct gtttgtcacc accccgcgca cgatccacac ctgcaatgcg
     4021 ccctccccgg cagcgacatc agcaattcct attggtgcgc atattgtcag caaggtacaa
     4081 acgctgttgg caagccagag taaccccgga cgcacgctgc gagcgacacg tagtgtggat
     4141 gccttacacg ccgcatttaa tcaataacct ttgaaaacag gacgtaacaa tgaaacttaa
     4201 cgacagtaac ttattccgcc agcaggcgtt gattaacggg gaatggctgg acgccaacaa
     4261 tggcgggatc atcgacgtca ccaatccggc gaacggcgac aagctgggta gcgtgccgaa
     4321 aatgggcgct gatgaaaccc gcgccgctat cgacgccgcc aaccgcgccc tgcccgccag
     4381 gcgtgcgctc accgccaaag aacgcgccaa cattctgcgc aactggttca atttgatgat
     4441 ggagcatcag gacgatttag cgcgcctgat gaccctcgaa cagggcaaac cactggccga
     4501 agcgaaaggc gaaatcagct acgctgcctc ttttattgag aggtttgccg aagaaggcaa
     4561 acgtatttat ggcgatacca ttcccggtca tcaggccgat aagcgcctga ttgttatcaa
     4621 gcagccgatt ggcgttaccg cagctatcac gccgtggaac ttcccggcgg cgatgattac
     4681 ccgtaaagcc ggtccggcgc tggcggcagg ctgcaccatg gtgctgaagc ccgccagtca
     4741 gacaccgttc tctgcgctgg cgctggcgga gctggcgatt cgcgcgggca ttgcggctgg
     4801 cgtgtttaac gtggtcaccg gttcggcagg cgcggtcggt aatgaactga ccagcaaccc
     4861 gctggtacgc aaactgtcgt ttaccggttc gaccgaaatt ggccgacagt taatggaaca
     4921 gtgcgcgaaa gacatcaaaa aagtgtcgct ggagctgggc ggcaacgcgc cgtttatcgt
     4981 ctttgacgat gccgatctcg ataaagccgt ggaaggcgcg ctggcctcga aattccgcaa
     5041 cgccgggcaa acctgcgtct gcgccaaccg tttggcgtgt atgaccgctt tgccgaaaaa
     5101 ttgcagcagg cggtgagcaa actgcacatc ggcgacgggc tggataaagg cgtcaccatc
     5161 gggccgctga tcgatgaaaa agcggtagca aaagtggaag agcatattgc cgatgcgctg
     5221 gagaaaggtg cgcgtgtggt ttgcggcgct aaagcggatg aacgcggcgg caacttcttc
     5281 cagccgacca ttctggtgga cgtgccggcc aacgccaaag tgtcgaaaga agagacgttc
     5341 ggccccctcg ccccgctgtt ccgctttaaa gatgaagccg atgtgattgc gcaagccaat
     5401 gacaccgagt ttggccttgc cgcctatttc tacgcccgtg atttaagccg cgtcttccgc
     5461 gtgggcgaag cgctggagta cggcatcgtc ggcatcaata ccggcattat ttccaatgaa
     5521 gtggccccgt tcggcggcat caaagcctcg ggtctgggtc gtgaaggttc gaagtatggc
     5581 atcgaagatt acttagaaat caaatatatg tgcatcggtc tttaactgga gaatgcgaat
     5641 gaacagcaat aaagagttaa tgcagcgccg cagtcaggcg attccccgtg gcgttgggca
     5701 aattcacccg attttcgctg accgcgcgga aaactgccgg gtgtgggacg ttgaaggccg
     5761 tgagtatctt gatttcgcgg gcgggattgc ggtgctcaat accgggcacc tgcatccgaa
     5821 ggtggtggcc gcggtggaag cgcagttgaa aaaactgtcg cacacctgct tccaagtgct
     5881 ggcttacgag ccgtatctgg agctgtgcga gattatgaat cagaaggtgc cgggcgattt
     5941 cgccaagaaa acgctgctgg ttacgaccgg ttccgaagcg gtggaaaacg cggtaaaaat
     6001 cgcccgcgcc gccaccaaac gtagcggcac catcgctttt agcggcgcgt atcacgggcg
     6061 cacgcattac acgctggcgc tgaccggcaa ggtgaatccg tactctgcgg gcatggggct
     6121 gatgccgggt catgtttatc gcgcgcttta tccttgcccg ctgcacggca taagcgagga
     6181 tgacgctatc gccagcatcc accggatctt caaaaatgat gccgcgccgg aagatatcgc
     6241 cgccatcgtg attgagccgg ttcagggcga aggcggtttc tacgccgcgt cgccagcctt
     6301 tatgcagcgt ttacgcgctc tgtgtgacga gcacgggatc atgctgattg ccgatgaagt
     6361 gcagagcggc gcggggcgta ccggcacgct gtttgcggtg gagcagatgg gcgtggcgcc
     6421 ggatcttacc acctttgcga aatcgatcgc tggcgggcgt caccgggcgc gcggaagtga
     6481 tggacgctgt tgcaccgggc ggtctgggcg gcacctatgc cggtaacccg attgcctgcg
     6541 tggctgcgct ggaagtgttg aaggtgttcg agcaggaaaa tctgctgcaa aaagccaacg
     6601 atctggggca gaagctaaaa gacggattgt tggcgatagc cgaaaaacac ccggagatcg
     6661 gcgacgtacg cgggctggga gcgatgattg ccatcgagct gtttgaagat ggcgatcaca
     6721 gcaaaccgga cgcaaaactc accgccggga tcgtggcacg cgcccgcgat aagggcctga
     6781 ttcttctctc ctgcggcccg tattacaacg tgctgcgcat ccttgtactg ctcaccattg
     6841 aagacgctca gatccgtcag ggtctggaga ttatcggtca gtgttttgat gaggcgaagc
     6901 agtagcaccg tccccatgca ggaggcgacg ctgcgcgtct tgtccggcct acgagaatcc
     6961 aggtcggata aggcgtttac gccgcatccg acaatctgta cgtgaacagg aataaatcta
     7021 tgtcggccgg ataatgcgga gccgctctcc ggcaaaaaga atcaataaca attaaacgcg
     7081 tgacccggcg cgggaaatgt cggggcgctc tcccaagtga cacactttcg agaggattca
     7141 ggatggggca atcatcgcaa ccacatgagt taggcggcgg gctgaaatca cgccacgtca
     7201 ccatgttgtc tattgccggt gttatcggcg caagtctgtt tgtcggttcc agcgtcgcca
     7261 tcgccgaagc gggcccggca gtattactgg cctatctgtt cgccgggcta ctggtggtta
     7321 tgattatgcg gatgttggcg gaaatggcgg ttgccacgcc cgataccggt tcgttttcca
     7381 cctatgccga taaagccatt ggtcgctggg cgggctatac catcggctgg ttgtactggt
     7441 ggttttgggt actggttatc ccgctggaag ccaacatcgc cgccatgatc ctgcactcgt
     7501 gggttccagg cattcccatc tggttatttt ccctcgtcat tacccttgcc ttaactggca
     7561 gtaatttatt aagcgttaaa aactacggcg aatttgagtt ctggctggcg ctgtgcaaag
     7621 tcatcgctat cctggccttt attttccttg gtgcagtcgc aattagcggt ttttaccctt
     7681 atgccgaagt gagcgggatc tcaagattgt gggatagcgg cggctttatg cccaacggct
     7741 tcggtgcggt attaagcgcg atgttgatca ccatgttctc gtttatgggc gcagaaattg
     7801 tcaccattgc cgccgcggaa tccgacacgc cggaaaaaca tattgtccgc gccactaact
     7861 cggttatctg gcgtatttct atcttctatt tgtgctctat ttttgtcgtc gtggcattaa
     7921 ttccgtggaa tatgcccgga ctaaaagccg tcggttctta tcgctcggta ctggaattgc
     7981 tcaatattcc ccatgcgaaa ttaatcatgg actgtgtgat attactttcc gtaaccagct
     8041 gcctgaactc ggcgctgtat accgcttcca ggatgctcta ctccttaagc cgtcgcggag
     8101 atgcgcctgc ggtaatgggt aaaatcaacc gcagtaaaac cccgtacgtg gcggtgttac
     8161 tctccaccgg cgcggcattc ttaacggtgg tggtgaacta ttacgtgcct gcgaaggtat
     8221 ttaaatttct gatcgacagc tccggcgcta tcgccctgct ggtttattta gtcatcgccg
     8281 tttcacagtt gcggatgcgc aaaattctgc gagcagaagg aagcgaaatt cgcttgcgca
     8341 tgtggcttta tccctggctc acctggctgg tcatcggctt tattaccttt gtgttggtag
     8401 tgatgctatt ccgcccggcg caacagttag aagtgatctc caccgactta ttagcaatag
     8461 ggattatctg taccgtgcca attatggcgg ctggaataag ctgataatgt ggcaaaaaac
     8521 acccgttcat aatacgcgct gataataatc aggagtcaca ccatgaccat tacgtctctg
     8581 gatggctatc gctggctgaa gaacgatatt attcgcggta attttcaacc ggatgaaaaa
     8641 ttacggatga gtttgctgac atcgcgttat gcacttggcg ttgggccgtt gcgggaagca
     8701 ctttctcaac tggtggcgga acggctggtc acggtggtga atcaaaaagg gtatcgggtg
     8761 gcgtctatgt cagagcagga gctgctcgat attttcgatg cccgcgccaa tatggaagcg
     8821 atgttagtga gtctggcgat tgcccgcggt agcgatgagt gggaggcaga cgttctcgca
     8881 aaagcgcatc tgctcagtaa gctggaagcc tgtgacgcca gcgagaaaat gcttgatgag
     8941 tgggatctgc gtcatcaggc gtttcataca gcaattgtgg cgggctgtgg ttctcactat
     9001 ttgctgcaaa tgcgtgaacg gttgtttgat ctggcggcgc gctatcgatt tatctggctg
     9061 cggcgaacgg tgctttcggt agaaatgctg gaggataaac acgatcagca ccagaccctg
     9121 actgcggcgg tactggcgcg agataccgcg cgcgccagtg agttaatgcg ccagcattta
     9181 ctgacgccaa ttcccattat ccagcaggcg atggctggca attaactact cttccggaat
     9241 acgcaacact tgccccggat aaattttatc cgggcttttt agcatcggtt tattcgcttc
     9301 gaagatttta ttgtacagat tagcgttacc gtagacctgt ttggaaatgg cactcagagt
     9361 gtcgccagac ttaacggtat aaaactggct ggcagtggct ggtgtcgccg ttttcacctg
     9421 atcatcaaca ctggcaatac cggaaatatt ccccaccgca acaaggattt tctccttcgc
     9481 ctcctgactc aggccgtcac cagtgaccgt cgctttgccg tcggcaattt gaatgttcac
     9541 tttatcggca tcaggtatac cggttttgct cagatgctcc tgcaccttct tcgcctgatc
     9601 gtctttatcg tgctgacctg taaccgcgtc ccagagtttt tctccggcat ctttcacaaa
     9661 attgaacaga cccatagcta cctcattcgt taacggaaac actcagaaag tgtagcagag
     9721 gaacgcggcg cgttaacgcc gcggggggga gcacaggttt aatcgcgggt ttgcacccag
     9781 aacgcgtgaa tcaaaccggg gatataccca agcagtgtca gcagaatatt aataatgaac
     9841 gcccaaccga accctttacc gagcagcacg ccgagcggcg gcagaatgat ggtgatgacg
     9901 attctccaga aacccatatg tactccctat aagaaaatta ctcattgttt aaaaagagat
     9961 tttatctctt aagcgtagta attttagcgg agcctgccag tttcagctta cgcttttact
    10021 ctcatttacg ctgctgaggc tggtatatgt tgcattttta gtttagagtt tacttaattt
    10081 agaaaatact taaataaata tgactgaact cgcgcaatta caggccagtg ccgaacaggc
    10141 agcggcctta ttgaaagcaa tgagccatcc taaacgattg ctgattctgt gcatgcttag
    10201 cggttccccc ggcaccagcg cgggagagct gacgcgcatt accggactga gtgcctctgc
    10261 gacatcacag catctcgctc gtatgcggga cgaagggctt atcgacagcc aacgggatgc
    10321 ccaacgcatt ctatattcca ttaaaaatga ggcggtaaat gccattatcg ccaccctgaa
    10381 aaatgtctat tgtccgtaag gagtcactat ggctttgaca accatttcgc cgcatgatgc
    10441 acaagaatta atcgcacgcg gcgcaaagtt aatcgatatt cgtgacgctg atgaatatct
    10501 tcgtgaacat attcctgaag cagatctggc tccattatcc gtgctggaac agtcaggtct
    10561 tccacctaaa ttacgtcgcg agcaaattat attccactgc caggcaggta aacgcaccag
    10621 taataacgcc gataaattag cagcgattgc cgcccccgca gaaatatttt tactcgaaga
    10681 taggattgat ggctggaaaa gagctggatt gccagtagcg gtaaataaat ctcaaccctt
    10741 gccgttaatg cgccaggtgc agatcgctgc gggtggttta atattaatcg gcgttgtact
    10801 gggttatacc gtaaatagcg gtttcttctt attaagtggc tttgttggtg ccgggttact
    10861 gtttgcagga atcagcggtt tttgtggaat ggcaaggttg ttagataaga tgccgtggaa
    10921 ccaacgagct tgagaagcga cgccggacgc gccctagcag cgacatccgg cctcagtaat
    10981 tagatcagga aatcgtcgag agatttacct tctgccagcg cctgagcaat tggcttcggt
    11041 gtacggccct gaccggtcca ggtcttagtt tcaccgttaa catcagtgaa tttatatttc
    11101 gccggacgcg gctggcgttt tttaccagca cgtggtgcag cagcagagct attacccaat
    11161 aactcttccg ggttaattcc gtcagctttc atcagctcca gccaggtgct aattttttcc
    11221 tgacgctcag ccagttcacg ctgctgctgt tcttcttctt cacgtctttc tttagtgaca
    11281 accctgaatt tttcgagcat ttcttcaaga acgtcaatgg agaattcgcg agccatcgca
    11341 cggagggttc gaatgttatt taaactttgt aacattacgg acataataaa gaaaaccttt
    11401 taacgccaaa acaaaaaagt atttcgtcgc gtagtgtaag cgatcactta ttatatttcc
    11461 acaaaattta atctatttac agtcctgcgc gagattattt cagctgttat tttctgaaac
    11521 tctcagaata atttcaagat tatatattag ccattttgat gagtaattta ggttattggt
    11581 gaacagagtg gcgctctctg ctcgctaact ccgcaagcct gataaaaccg aagtgaataa
    11641 aaatgcaata taacagaata aaagaaaaca cccctcactg gtgctttctg ctgttaatgt
    11701 acattttctg gcatcaaaaa tgctgtaaat gacccggtca cgacaaacac cgaattctct
    11761 acgcttatag cgttacctca cccccaaact ttcattagtg aaattaaagg caaggtcata
    11821 tccaattgat ttaattgaaa ataaatcata tcggcatgta aaaatccaca atgtacaaaa
    11881 aacgagctgt tacggaatat tttatctaca aaaactgact aaataaaagt ttttcactaa
    11941 ttgattagtc atagccagcg atatacgcta tgcgaaaatg cagatggcaa tgagatccac
    12001 tgctttcatc tccattaaca tcccattacg ctttattaag gagcattagc atgttctcac
    12061 cgcagtcacg cttgcgtcat gcagttgcag atacgttcgc gatggttgtt tactgttctg
    12121 tcgtgaacat gtgtattgaa gttttcctct ccggaatgag cttcgaacag tctttttatt
    12181 ccagattggt agcgattccg gtgaacatct taattgcatg gccatacggt atgtaccgcg
    12241 atctgtttat gcgcgcggca cgcaaagtta gcccgtcggg ctggataaaa aatctggctg
    12301 atatcctggc ttatgtgacg ttccagtcac cggtgtatgt ggcgatcttg ttagtggtgg
    12361 gcgcagactg gcatcagatt atggcggcgg tcagttcaaa catcgttgtt tcgatgttga
    12421 tgggggcggt ttatggctac ttcctcgatt attgccgccg actgtttaaa gtcagccgtt
    12481 accagcaggt aaaagcctga ctcttctttt cgcgactggc atcgccagtc gcgtctttaa
    12541 ctggcttcgc caaataaacc attcaaataa cgttcaagcg caacacgcga actgaagcca
    12601 tgcgggatac cgtaatgctc gtgtcgctcg cctgctaaat agagcggaaa ttgctggtaa
    12661 tgatcgcaag ttttaatatc ggaagcgggt tcagccagtg ttgaactgcg ttcttttaat
    12721 gttggatgaa ttaccagagc ggtacgtccc attcgcgctt cgcgattaac atagacataa
    12781 ttttccccac ggcggtaacc atacgctttc tgggttacca catcgacagt aaaaccgact
    12841 ttttcaagta cgcgcgccac ctcgtctggt cgtaaataca tatttgatcc tcgttatttt
    12901 caaccgcg
//
LOCUS       DADMJE010000120        12908 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.121, whole genome shotgun sequence.
ACCESSION   DADMJE010000120 DADMJE010000000
VERSION     DADMJE010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12908)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12908)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12908
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.121"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(75..1613)
                     /locus_tag="JN001_002981"
     CDS             complement(75..1613)
                     /locus_tag="JN001_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005147267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HAY9054144.1"
                     /translation="MTLCGPGSVSSCGQQAQTRGLKHLFVMADSFLHQAGMTAGLTRS
                     LAVKGIAMTLWPCPVGEPCITDVCAAVAQLRESGCDGVIAFGGGSVLDAAKAVALLVT
                     NPDSTLAEMSETSVLQPRLPLIAYEDDCVTRLIQDDVNETAYNQIKNWSISELREYVL
                     SDETSVDDIAFTRKGLTSEVVAAVAKICSNADLIYGAKKMPVIKKANTTIGIPGTFSA
                     RLQPNDTRDDVQSIAAQIYEGLSFGVGDAVIGVNPVTDDVENLSRVLDTIYGVIDKFN
                     IPTQGCVLAHVTTQIEAIRRGAPGGLIFQSICGSEKGLKEFGVELAMLDEARAVGAEF
                     NRIAGENCLYFETGQGSALSAGANFGADQVTMEARNYGLARHYDPFIVNTVVGFIGPE
                     YLYNDRQIIRAGLEDHFMGKLSGISMGCDCCYTNHADADQNLNENLMILLATAGCNYI
                     MGMPLGDDIMLNYQTTAFHDTATVRQLLNLRPSPEFERWLESMGIMANGRLTKRAGDP
                     SLFF"
     gene            complement(1687..2523)
                     /gene="eutJ"
                     /locus_tag="JN001_002982"
     CDS             complement(1687..2523)
                     /gene="eutJ"
                     /locus_tag="JN001_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HAY9054145.1"
                     /translation="MAHDEQWLTPRLQTAATLCNQTPAATESPLWLGVDLGTCDVVSM
                     VVDRDGQPVAVCLDWADVVRDGIVWDFFGAVTIVRRHLDTLEQQFGRRFSHAATSFPP
                     GTDPRISINVLESAGLEVSHVLDEPTAVAELLQLDNAGVVDIGGGTTGIAIVKKGKVT
                     YSADEATGGHHISLTLAGNRRISLEEAEQYKRGHGEEIWPTVKPVYEKMADIVARHIE
                     GQGITDLWLAGGSCMQPGVAELFRKQFPALQVHLPQHSLFMTPLAIASSGREKAEGLY
                     AK"
     gene            complement(2534..3937)
                     /locus_tag="JN001_002983"
     CDS             complement(2534..3937)
                     /locus_tag="JN001_002983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HAY9054146.1"
                     /translation="MNQQDIEQVVKAVLLKMQSSDTPPAAVHEMGVFASLDDAVAAAK
                     VAQQGLKSVAMRQLAIAAIREAGEKHARDLAELAVSETGMGRVEDKFAKNVAQARGTP
                     GVECLSPQVLTGDNGLTLIENAPWGVVASVTPSTNPAATVINNAISLIAAGNSVIFAP
                     HPAAKKVSQRAITLLNQAIVAAGGPENLLVTVANPDIETAQRLFKFPGIGLLVVTGGE
                     AVVEAARKHTNKRLIAAGAGNPPVVVDETADLARAAQSIVKGASFDNNIICADEKVLI
                     VVDSVADELMRLMEGQHAVKLTAEQAQQLQPVLLKNIDERGKGTVSRDWVGRDAAKIA
                     AAIGLNVPQETRLLFVETTAEHPFAVTELMMPVLPVVRVANVADAIALAVKLEGGCHH
                     TAAMHSRNIENMNQMANAIDTSIFVKNGPCIAGLGLGGEGWTTMTITTPTGEGVTSAR
                     TFVRLRRCVLVDAFRIV"
     gene            complement(3949..4236)
                     /gene="eutN"
                     /locus_tag="JN001_002984"
     CDS             complement(3949..4236)
                     /gene="eutN"
                     /locus_tag="JN001_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutN"
                     /protein_id="HAY9054147.1"
                     /translation="MKLAVVTGQIVCTVRHHGLAHDKLLMVEMIDPQGNPDGQCAVAI
                     DNIGAGTGEWVLLVSGSSARQAHKSETSPVDLCVIGIVDEVVSGGQVIFHK"
     gene            complement(4343..4636)
                     /gene="eutM"
                     /locus_tag="JN001_002985"
     CDS             complement(4343..4636)
                     /gene="eutM"
                     /locus_tag="JN001_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutM"
                     /protein_id="HAY9054148.1"
                     /translation="MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAM
                     VRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHGDLEEVFPIGLKGDSSNL"
     gene            complement(4675..5691)
                     /gene="pta"
                     /locus_tag="JN001_002986"
     CDS             complement(4675..5691)
                     /gene="pta"
                     /locus_tag="JN001_002986"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY9054149.1"
                     /translation="MIIERCRELALRAPARVVFPDALDQRVLKAAQYLHQQGLATPIL
                     VANPFELRQFALSHGVAMDGLQVIDPHGNLAMREEFAHRWLARAGEKTPPDALEKLTD
                     PLMFAAAMVSAGKADVCIAGNLSSTANVLRAGLRIIGLQPGCKTLSFIFLMLPQYSGP
                     ALGFADCSVVPQPTAAQLADIALASAETWRAITGEEPRVAMLSFSSNGSARHPCVANV
                     QQATEIVRERAPKLVVDGELQFDAAFVPEVAAQKAPASPLQGKANVMVFPSLEAGNIG
                     YNIAQRLGGYRAVGPLIQGLAVPMHDLSRGCSVQEIIELALVAAVPRQTEVNRESSLQ
                     TLVE"
     gene            complement(5681..6490)
                     /gene="eutT"
                     /locus_tag="JN001_002987"
     CDS             complement(5681..6490)
                     /gene="eutT"
                     /locus_tag="JN001_002987"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001425897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization cob(I)yrinic acid
                     a,c-diamide adenosyltransferase EutT"
                     /protein_id="HAY9054150.1"
                     /translation="MKDFITEAWLRANHTLSEGAEIHLPADSRLTPSARELLESRHLR
                     IKFIDEQGRLFVDDEQQKPQPVHGLTSSDEHPQACCELCRQPVAKKPDTLTHLSAEKM
                     VAKSDPRLGFRAVLDSTIALAVWLQIELAEPWQPWLADIRSRLGNIMRADALGEPLGC
                     QAIVGLSDEDLHRLSHQPLRYLDHDHLVLEASHGRDAALLNLLRTKVRETETVAAQVF
                     ITRSFEVLRPDILQALNRLSSTVYVMMILSVTKQPLTVKQIQQRLGERNDY"
     gene            complement(6487..7188)
                     /gene="eutQ"
                     /locus_tag="JN001_002988"
     CDS             complement(6487..7188)
                     /gene="eutQ"
                     /locus_tag="JN001_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutQ"
                     /protein_id="HAY9054151.1"
                     /translation="MKKLITANDIREAHARGEQAMSVVLRASIITPEAREVADLLGFT
                     ITECDESIPVTASVPASVPADKTESQRIRETIIAQLPEGQFTESLVAQLMEKVMKEKQ
                     SLEQGAMQPSFKSVTGKGGIKVIDGSSVKFGRFDGAEPHCVGLTDLVTGDDGSSMAAG
                     FMQWENAFFPWTLNYDEIDMVLEGGLHVRHEGQTMIAKAGDVMFIPKGSSIEFGMTSS
                     VKFLYVAWPANWQSL"
     gene            complement(7163..7642)
                     /gene="eutP"
                     /locus_tag="JN001_002989"
     CDS             complement(7163..7642)
                     /gene="eutP"
                     /locus_tag="JN001_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization acetate kinase EutP"
                     /protein_id="HAY9054152.1"
                     /translation="MKRIAFVGSVGAGKTTLFNALQGNYTLARKTQAVEFNDKGDIDT
                     PGEYFSHPRWYHALITTLQDVDMLIYVHGANDPESRLPAGLLDIGVSKRQIAVISKTD
                     MPDADVAATRKLLLETGFEEPIFELNSHDPQSVQQLVDYLASLTKQEEAGEKTHHSE"
     gene            complement(7655..7990)
                     /gene="eutS"
                     /locus_tag="JN001_002990"
     CDS             complement(7655..7990)
                     /gene="eutS"
                     /locus_tag="JN001_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HAY9054153.1"
                     /translation="MDKERIIQEFVPGKQVTLAHLISHPGEELAKKIGVPDAGAIGIM
                     TLTPGETAMIAGDLALKAADVHIGFLDRFSGALVIYGSVGAVEEALSQTVSGLGRLLN
                     YTLCEMTKS"
     gene            complement(8282..10561)
                     /gene="maeB"
                     /locus_tag="JN001_002991"
     CDS             complement(8282..10561)
                     /gene="maeB"
                     /locus_tag="JN001_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxaloacetate-decarboxylating
                     malate dehydrogenase"
                     /protein_id="HAY9054154.1"
                     /translation="MDDQLKQSALDFHEFPVPGKIQVSPTKPLATQRDLALAYSPGVA
                     APCLEIEKDPLKAYKYTARGNLVAVISNGTAVLGLGNIGALAGKPVMEGKGVLFKKFA
                     GIDVFDIEVDELDPDKFIEVVAALEPTFGGINLEDIKAPECFYIEQKLRERMNIPVFH
                     DDQHGTAIISTAAILNGLRVVEKNISDVRMVVSGAGAAAIACMNLLVALGLQKHNIVV
                     CDSKGVIYQGREPNMAETKAAYAVVDDGKRTLDDVIEGADIFLGCSGPKVLTQEMVKK
                     MARAPMILALANPEPEILPPLAKEVRPDAIICTGRSDYPNQVNNVLCFPFIFRGALDV
                     GATAINEEMKLAAVRAIAELAHAEQSEVVASAYGDQDLSFGPEYIIPKPFDPRLIVKI
                     APAVAKAAMESGVATRPIADFDVYIDKLTEFVYKTNLFMKPIFSQARKAPKRVVLPEG
                     EEARVLHATQELVTLGLAKPILIGRPNVIEMRIQKLGLQIKAGVDFEIVNNESDPRFK
                     EYWTEYFQIMKRRGVTQEQAQRALISNPTVIGAIMVQRGEADAMICGTVGDYHEHFSV
                     VKNVFGYRDGVHTAGAMNALLLPSGNTFIADTYVNDEPDAEELAEITLMAAETVRRFG
                     IEPRVALLSHSNFGSSDCPSSSKMRQALELVRDRAPDLMIDGEMHGDAALVEAIRNDR
                     MPDSPLKGSANILVMPNMEAARISYNLLRVSSSEGVTVGPVLMGVAKPVHVLTPIASV
                     RRIVNMVALAVVEAQTQPL"
     gene            10850..11800
                     /gene="tal"
                     /locus_tag="JN001_002992"
     CDS             10850..11800
                     /gene="tal"
                     /locus_tag="JN001_002992"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY9054155.1"
                     /translation="MNELDGIKQFTTVVADSGDIESIRHYHPQDATTNPSLLLKAAGL
                     SQYEHLIDDAIAWGKKNGKTQEQQVVAACDKLAVNFGAEILKIVPGRVSTEVDARLSF
                     DKEKSIEKARHLVDLYQQQGVEKSRILIKLASTWEGISAAEELEKEGINCNLTLLFSF
                     AQARACAEAGVFLISPFVGRIYDWYQARKPMAPYVVEEDPGVKSVRNIYDYYKQHHYE
                     TIVMGASFRRTEQILALTGCDRLTIAPNLLKELQEKVSPVVRKLIPPSQTFPRPAPMS
                     EAEFRWEHNQDAMAVEKLSEGIRLFAVDQRKLEDLLAAKL"
     gene            11820..>12908
                     /locus_tag="JN001_002993"
     CDS             11820..>12908
                     /locus_tag="JN001_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HAY9054156.1"
                     /translation="MSRKDLANAIRALSMDAVQKANSGHPGAPMGMADIAEVLWNDFL
                     KHNPTDPTGYDRDRFILSNGHASMLLYSLLHLTGYDLPLEELKNFRQLHSKTPGHPEI
                     GYTPGVETTTGPLGQGLANAVGLAIAERTLAAQFNQPDHEIVDHFTYVFMGDGCLMEG
                     ISHEVCSLAGTLGLGKLIGFYDHNGISIDGETEGWFTDDTAKRFEAYHWHVIHEIDGH
                     DPQAVKEAILEAQSVKDKPSLIICRTVIGFGSPNKAGKEEAHGAPLGEEEVALARQKL
                     GWHHPPFEIPKEIYHAWDAREKGEKAQQSWNEKFAAYKKAHPQLAEEFTRRMSGGLPK
                     DWEKTTQKYINELQANPAKIATRKASQNT"
BASE COUNT         2875 a         3698 c         3356 g         2979 t
ORIGIN      
        1 tcccattgac gccatcacgc tgcgtacaat ttcttcaatc tgtttttgat ccatgatgtg
       61 ttatctccgc gtcatcagaa gaacagtgac ggatcgcccg cccgtttggt caggcgaccg
      121 tttgccataa tgcccatgct ttccagccag cgttcaaact ctggtgacgg gcgcaggttg
      181 agtaactgac gcacagtggc ggtatcgtgg aatgcggtgg tctggtagtt gagcatgatg
      241 tcatcaccca gcggcatccc catgatgtag ttgcagcctg cggtggcgag caggatcatc
      301 aggttttcgt tgaggttctg gtcagcgtca gcgtggttgg tgtagcagca gtcacagccc
      361 atagagatgc cgctcagctt gcccataaag tgatcttcta agccagcacg gataatctgg
      421 cggtcgttgt agagatactc cggcccaata aagccgacca cggtgttgac gataaacgga
      481 tcgtaatgac gcgccagccc atagttacgt gcttccatcg tcacctggtc agcgccgaag
      541 ttagcgccag cggatagcgc agagccttgt ccggtttcga agtagaggca gttttccccg
      601 gcgatacggt tgaactctgc acccactgcg cgcgcttcgt cgagcatcgc cagttccacg
      661 ccaaactctt tcagcccttt ttcgctgcca cagatactct ggaaaatcag tccgccaggc
      721 gcgccgcgac gaatcgcttc gatctgggtg gtgacgtgcg ccagtacgca gccctgagtt
      781 gggatgttga atttgtcgat cacgccataa atggtatcca gcacgcggct taagttttcc
      841 acgtcgtcag ttaccgggtt gacgccgatc accgcatcgc ccaccccgaa ggaaagccct
      901 tcgtagattt gcgcggcgat actttgcacg tcgtcacgag tgtcatttgg ctgcaaacgg
      961 gcgctgaagg tgcccggaat accgatggtg gtattggcct ttttgattac cggcattttc
     1021 ttcgcgccgt agatcaggtc cgcgttggag caaatcttcg ctaccgccgc gaccacttcc
     1081 gaggtcagcc ctttgcgggt aaaggcaatg tcgtccacgc tagtttcatc gctcagcaca
     1141 tactcacgca gttcgctgat gctccagttt ttaatctggt tgtaggccgt ttcgttaaca
     1201 tcgtcctgaa tcagccgcgt cacgcagtca tcttcatagg caatcagcgg caagcgcggt
     1261 tgcagaacgc tggtttctga catctctgcc agcgtgctat ccgggttcgt caccagcaac
     1321 gccacggctt tcgccgcatc cagcaccgag ccgccgccaa atgcgatcac cccatcacag
     1381 cctgactcac gcaactgcgc cacggctgca cacacgtcgg tgatgcacgg ttcgcccacc
     1441 ggacatggcc agagcgtcat ggcgatgcct ttaacagcca ggctgcgcgt cagcccggcg
     1501 gtcatccctg cctgatgcaa aaagctgtct gccatcacga acagatgttt cagcccacgc
     1561 gtttgcgctt gctgtccgca actgctcacc gagcccggac cgcaaagcgt caccggtgga
     1621 acgctaaatg tttttacccg ttgcagattc agggtatcga acgcctgaaa gagcgcggtc
     1681 tgcaattcat tttgcatata gcccctccgc tttctctcgc ccactactgg cgatcgccag
     1741 cggggtcata aacaaactgt gctgcggtaa atgcacctgt aacgccggga attgtttgcg
     1801 aaacagttcc gccacgcccg gttgcataca agagccgccc gccagccata aatcagtaat
     1861 gccctgccct tcaatatgcc gggcgacaat gtccgccatt ttttcgtaca ccggtttcac
     1921 cgtaggccaa atctcttcac cgtgaccgcg cttgtactgc tccgcctctt ccagcgaaat
     1981 acggcgattt ccggcgagag tcagagagat gtgatgtccg ccggttgctt catccgccga
     2041 gtacgtcacc ttgccctttt tcacgatggc aatgccggta gtgccgccgc cgatatccac
     2101 tacaccggcg ttgtccagtt gcagcagctc cgcaactgcg gttggctcat ccagcacatg
     2161 gctcacttcc agtccagcag actccagcac gttgatggaa atacgcgggt ccgtacctgg
     2221 aggaaatgaa gtcgccgcat ggctaaaacg gcgaccgaat tgctgctcga gcgtgtcgag
     2281 atggcgacga acaatggtga cagcgccgaa gaaatcccag acgatgccgt cgcggaccac
     2341 atcggcccag tcgaggcata ccgccaccgg ctgaccgtcg cggtcgacaa ccatcgacac
     2401 cacatcgcag gtgcccagat ccacccccag ccacagcgga gattccgtcg cggcgggcgt
     2461 ctggttacac agcgttgccg ccgtttgcag acgtggggtg agccattgtt cgtcgtgcgc
     2521 catctgttac tccttaaaca atgcgaaacg catcgactaa tacacagcga cgcagacgga
     2581 caaacgtacg cgcgctggtt accccttcac cggttggcgt ggtgatggtc atggtggtcc
     2641 agccttcccc gcccagcccc agcccggcaa tgcacggtcc gttcttaacg aaaatgctgg
     2701 tatcaatagc attcgccatc tggttcatgt tttcgatgtt gcgcgagtgc attgccgccg
     2761 tgtggtggca accgccttcc agtttcaccg ccagcgcaat ggcatccgcc acgttggcga
     2821 cgcgcacgac gggcagcacc ggcatcatca gttcggtcac ggcaaacgga tgttctgcag
     2881 tggtttccac aaacagcaaa cgcgtttctt gcggcacgtt caggccgatt gccgccgcga
     2941 ttttcgccgc atcgcgacca acccagtcac ggctgacggt gccttttccg cgctcgtcga
     3001 tatttttcag caacaccggt tgcagctgct gcgcctgttc tgcggtcagt ttcaccgcgt
     3061 gctggccttc catcagacgc atcagttcat cggctacgct atcaacaaca atcagtacct
     3121 tttcgtcggc acaaatgatg ttgttatcga aagaagcgcc tttgacgatg gactgagcgg
     3181 cacgggcgag gtcggcggtt tcatccacca ctaccggcgg gttgccagcg cctgcggcaa
     3241 tcagacgttt attggtgtgt ttacgcgccg cttctactac cgcttcgccg ccggtcacca
     3301 ccagaaggcc gatgcccgga aacttgaaca aacgctgcgc ggtttcgata tccggatttg
     3361 ccacagtaac cagtaagttt tccggcccgc ctgcggcaac aatcgcctgg ttgagcagcg
     3421 tgatcgcccg ctgggagact tttttcgccg ccggatgcgg ggcaaaaatg acgctgttgc
     3481 ccgcggcaat caggctgatg gcgttattaa ttacggttgc cgccgggtta gtggacggag
     3541 ttaccgaagc caccacgccc cagggcgcgt tttcaattaa agtcaggccg ttgtcgccgg
     3601 tcagcacctg cggagagaga cactcaacgc ctggcgtgcc gcgcgcctga gcgacgtttt
     3661 tggcaaattt atcttcaacg cggcccatgc cggtttcact gacggcaagt tccgctaaat
     3721 ctctggcgtg tttttcgcct gcctcacgaa tggcagcaat ggctaactgg cgcattgcca
     3781 cgctttttaa cccttgctgg gcgactttgg ctgccgcaac ggcgtcatcc agggacgcga
     3841 aaacgcccat ctcatgaacg gcggcgggcg gcgtgtcact gctttgcatt ttcagcagta
     3901 ccgctttcac cacctgttca atatcctgtt gattcatgat gttctgcctt atttgtggaa
     3961 aattacctga ccgccagaca ccacctcatc gacaatgcca atcacgcaca gatcgaccgg
     4021 tgacgtttcg cttttatgcg cctggcgggc ggaactgcca ctcaccagta acacccactc
     4081 cccggttccc gcgccaatat tgtcgatggc gacggcgcat tgcccgtcag gattaccttg
     4141 tggatcaatc atttccacca tcagcaattt gtcatgcgcc agtccgtgat ggcgtacggt
     4201 acaaacaatt tgtccagtga cgactgccag tttcataccc gcctccgtgg cgtatttcag
     4261 gtaaaagctc cccctaccct ccgcagaagg taaaatgaaa aaggagagag cgtaacgccc
     4321 gaatcgacgt cacacagggt gattacaggt tgctgctatc gcctttcagg ccgatcggga
     4381 agacttcttc caggtcgccg tgcggacgcg ggataacgtg tacagatacc agctcgccga
     4441 tacgctgtgc cgctgcggca cctgcatcgg tcgcggcttt acaggctgca acatcaccac
     4501 gaaccatggc agtacacagg ccgccgccaa tctgcttaac accaaccagc ttgacgcgcg
     4561 cagctttcac catcgcgtca gaagcctcaa tcagtgcaac caggccccgg gtttcgatca
     4621 ttcctaatgc ttccattgtg ctttcctctt tatcagggtc cagaacggga ccgttcattc
     4681 aaccagtgtt tgtaaactgc tttcgcggtt cacttctgtc tgacgcggca cagctgccac
     4741 cagcgccagc tcgataattt cctgcacgct acaaccacga gagagatcgt gcatcggcac
     4801 ggcaagtcct tgtatcagtg gcccgacggc acgatatccg ccgagtcgtt gtgcgatgtt
     4861 gtaaccaata tttccggctt ccagcgacgg aaaaaccatc acattggcct tgccctgtag
     4921 cgggctggca ggcgcttttt gcgccgccac ttccggcacg aaggcggcgt caaactgtaa
     4981 ctcgccatcc accaccagct ttggtgcgcg ctcacggacg atttctgtcg cctgctggac
     5041 gttagcaaca caggggtgac gggcgctacc attgctggaa aacgacagca tcgccacgcg
     5101 cggctcttct ccggtgatgg cgcgccaggt ttcggcactg gcaagcgcga tatccgccag
     5161 ctgcgccgcc gtcggctgtg gcaccacgct gcaatcggca aagcccaacg ccgggccgct
     5221 gtactgtggc aacatcagga aaatgaaaga gagcgtttta cagcctggct gcaagccgat
     5281 aatgcgtaat ccggcacgca gcacatttgc cgtggaagag aggttgcctg cgatacagac
     5341 atccgcttta ccggcgctga ccattgctgc ggcgaacatc agagggtcgg taagtttttc
     5401 cagcgcatcc ggcggcgttt tttcgcccgc gcgggccagc cagcgatgag caaattcttc
     5461 ccgcattgcg aggttgccat gcggatcaat cacctgtagc ccgtccatcg ccacgccgtg
     5521 actgagcgca aactgacgaa gttcaaacgg attggcgacc agaatgggcg ttgccagacc
     5581 ttgttgatgt aaatattgcg cggctttcag cacacgttga tctaacgcat ccggaaaaac
     5641 cactctggcg ggcgctcgca acgccagttc acgacaacgt tcaataatca ttgcgttccc
     5701 ccagtcgttg ttggatctgc ttcaccgtta gcggctgctt cgttacgctc aggatcatca
     5761 tcacgtagac cgtgctggaa aggcggttca gcgcctgcaa aatgtccggg cgtaatactt
     5821 caaagctgcg ggtgataaag acctgcgccg ctacggtttc ggtttcccgc actttggtgc
     5881 gtagcagatt gagcaacgca gcatcgcgcc cgtggctggc ttccagcacc agatgatcgt
     5941 ggtcgagata gcgcagcggc tgatgagaaa gccgatgcag atcttcgtca gaaagcccga
     6001 caatcgcctg gcagcccagc ggttccccca gcgcatcggc gcgcataatg ttgccaagac
     6061 gcgaacggat atccgccagc cacggctgcc acggttccgc cagttcaatt tgcagccaca
     6121 ctgccagcgc aatggtgctg tcgagaaccg cgcgaaaacc cagacgcgga tcgcttttgg
     6181 cgaccatttt ttccgccgac aggtgagtca gcgtatccgg cttttttgcc accggctggc
     6241 ggcacagttc gcagcacgcc tgcggatgtt catcgctact ggtcagccca tgaacgggct
     6301 gcggcttctg ctgttcatcg tcaacaaaca ggcggccctg ctcgtcaata aacttgatgc
     6361 gcagatggcg gctttccagc aactcccggg cagagggcgt caggcgactg tccgcaggga
     6421 gatggatctc tgcgccttcg ctgagcgtat ggttcgctct tagccatgct tcggtgatga
     6481 aatctttcat agggattgcc agttagccgg ccaggcgaca tacaggaatt tcacgctgga
     6541 tgtcatacca aattcgatgc tggagccttt cgggataaac atcacgtcgc ctgctttggc
     6601 gatcatggtt tggccttcgt ggcgaacatg cagcccccct tccagcacca tgtcgatttc
     6661 gtcgtagttc agggtccacg ggaagaatgc gttctcccac tgcataaaac cggcggccat
     6721 gctgctgccg tcgtctccgg tcacaagatc agtcaagccc acgcaatgcg gctctgcgcc
     6781 gtcgaaacga ccaaacttga cgctgctgcc atcaatcact ttgatgccgc ctttgccggt
     6841 caccgatttg aagctcggct gcattgcgcc ctgctccagc gactgttttt ccttcatcac
     6901 tttttccatc agctgtgcga ccaggctttc ggtaaactgg ccttccggca gctgggcaat
     6961 gatggtttcg cggatgcgct ggctttcggt tttgtcggct ggcacgctgg cgggcacgga
     7021 cgccgttacc gggatcgatt catcacattc ggtgatggta aaacccagta gatccgccac
     7081 ttcacgggct tccggggtaa taatgctggc gcgcagaacc acggacattg cctgttcgcc
     7141 gcgcgcgtgt gcttcacgaa tatcattcgc tgtgatgagt tttttcacct gcttcctcct
     7201 gtttggtgag agatgccaga taatccacca gttgctgcac gctttgcggg tcgtggctgt
     7261 ttagctcgaa aatcggctct tcgaaacccg tctcaagcaa taactttcgc gttgcggcga
     7321 cgtcagcatc tggcatgtcc gttttactga tgacggcgat ttgccgtttg ctgacgccaa
     7381 tatccagcaa cccggcaggc aaccgacttt ccgggtcatt tgcgccatgg acatagatca
     7441 gcatgtctac atcctgtagc gtggtaatta aggcgtgata ccagcgggga tggctaaaat
     7501 attcacccgg cgtatcaata tcgcccttat cattaaattc cacggcctgt gtttttctgg
     7561 cgagggtata attcccctgc aacgcattaa ataacgttgt ttttcctgcc ccgacactac
     7621 ccacaaacgc aattcgtttc atgaatgcct cgtattaact tttggtcatt tcacaaagcg
     7681 tataatttaa taagcgacct aaaccgctga cggtttgtga taacgcttct tctactgcgc
     7741 ccaccgagcc ataaatcacc aatgcaccgc tgaagcggtc gagaaaaccg atatgcacat
     7801 cagcggcttt cagcgctaaa tcaccggcga tcatcgccgt ttcgccggga gttagcgtca
     7861 taatgccaat tgcgcccgca tccggaacgc cgattttctt cgccagttcc tcaccgggat
     7921 gcgagatgag atgcgccagt gtgacctgtt tgccgggcac aaattcctga atgatgcgtt
     7981 ctttatccat gagtcgccgc ctgtgaaaaa ctttcgtgta tcgtgacaat ttttcgtcag
     8041 agtaaataac aaaattcggc aagcgcgttt aaaaggtgag gtagatcact aagaatggag
     8101 agatattcgc tgtggtgcat aaactttcat atgcaacgca tgaatataaa taaaataata
     8161 tcgagatatt atatagactg cttttttatt attcgcaaac tcagtaataa gctttactaa
     8221 tatattgcag ccaaaccgct taccctgaat attcagggta agcgtgagag ttaaaaaaga
     8281 attacagcgg ttgggtttgc gcttcaacca cggccagcgc caccatgttg acgatacgac
     8341 gcaccgatgc gatcggcgtt aacacgtgaa ccggtttcgc cacgcccatc agcaccggac
     8401 cgacagtcac accttccgag ctggaaacgc gcagtaagtt gtaactaatg cgggcagctt
     8461 ccatgttcgg catcaccaga atattggcag aacctttcaa agggctgtcc ggcatacggt
     8521 cgttgcgaat cgcttccacc agcgctgcat cgccgtgcat ttcaccatca atcatcagat
     8581 ctggcgcacg atccctgacc agttccagcg cctgacgcat tttgctcgac gacgggcagt
     8641 cagaagaacc aaagttggag tgcgacaaca gagcaacgcg cggctcaata ccaaaacgac
     8701 ggacagtttc tgccgccatc aaggtgatct ccgccagctc ttctgcgtct ggttcgtcat
     8761 tgacgtaggt atcggcaata aaggtgttac cactcggcag cagcagcgcg ttcattgcac
     8821 ctgcggtgtg aacgccatcg cgataaccaa agacattttt caccacgcta aaatgttcat
     8881 gataatcgcc caccgtaccg cagatcattg catcggcttc cccacgctga accatgatcg
     8941 cgccgatcac tgtcgggtta ctgatcagcg cccgctgcgc ctgttcctga gtgacaccgc
     9001 gacgcttcat gatctggaag tattcggtcc agtactcttt aaagcgcgga tcggattcgt
     9061 tattgacgat ctcaaaatca acgcccgctt tgatctgcaa gcccagtttc tgaatgcgca
     9121 tttcgatcac gttcggacga ccgataagga tcggtttcgc cagtcccagc gttaccagtt
     9181 cctgagtggc atgcagaacg cgcgcctctt ccccttctgg cagaacaacg cgcttcggcg
     9241 ctttgcgagc ctgggagaaa atcggcttca taaacaggtt ggttttgtaa acgaactcag
     9301 tcagcttgtc gatgtagacg tcgaaatcag caatcggacg cgtcgccacg cccgactcca
     9361 tcgcggcttt agcgaccgca ggagcgatct taacgatcaa gcgcggatca aacggttttg
     9421 gaatgatgta ttccggacca aagctcagat cctgatcgcc atacgctgaa gccaccactt
     9481 cgctctgttc cgcatgggcg agttctgcaa tcgcacgtac cgccgccagt ttcatctctt
     9541 cgttgatggc ggttgcgcca acgtccagcg cgccacggaa gatgaacggg aagcacagga
     9601 cgttgttcac ctggttcgga tagtcagaac gaccggtgca aatgatggca tccggacgca
     9661 cttctttcgc cagcggcggc agaatttccg gttccgggtt cgccagcgcc aggatcattg
     9721 gcgcacgagc cattttcttc accatttcct gggtcagcac tttcgggccg gaacatccga
     9781 ggaaaatatc cgcgccttca atcacatcat cgagggtacg tttgccgtcg tccaccaccg
     9841 catatgcggc tttggtttcc gccatgtttg gctcacggcc ctgatagata acgccttttg
     9901 aatcgcaaac cacgatgtta tgtttttgca gacccagcgc taccagcagg ttcatacagg
     9961 cgattgctgc ggcacccgcg ccggaaacca ccatccgcac gtcggagatg tttttctcca
    10021 ccacgcgcaa gccgttgagg atggcggcag tgctgatgat tgccgtgccg tgctgatcgt
    10081 cgtggaatac cggaatattc atccgctcgc gcagtttctg ttcaatatag aaacattctg
    10141 gcgctttaat gtcttcgagg ttgattccgc cgaaggtcgg ttcgagcgca gcgacaactt
    10201 caataaattt gtccgggtcg agttcatcaa cttcaatgtc aaatacatca atcccggcga
    10261 atttcttaaa cagaacgccc ttgccttcca tcaccggttt gccagccagc gcgccaatgt
    10321 tgcctaaccc cagcaccgcc gtaccgttag agatcaccgc caccaggtta ccgcgcgcgg
    10381 tatatttgta ggcttttaac gggtcttttt cgatttcaag acaaggtgcg gcaacgcctg
    10441 gtgagtaggc cagcgccaga tcgcgctgcg ttgccagagg cttggttgga gaaacctgga
    10501 ttttccctgg aactggaaat tcatggaaat caagtgcact ttgttttaac tggtcatcca
    10561 tttggttgtt cctttcacgt aacgttcaca aataaagtgt gtgggcaaca gcccctgccc
    10621 acaacgtggc gcacattatt accccgccgg agtctacaga ctttgagcaa gtccaaactc
    10681 tcaccattaa tataatgttt tggtaataat cctataacac tgatgttacc tgcttaatcc
    10741 agcaatacca tgcctgtctg ctatgctttt ttgatgcgtt tagcgaaatt tctcagaagt
    10801 gtgaattaac gcactcatct aacactttac ttttcaagga gtatttccta tgaacgagtt
    10861 agacggcatc aaacagttca ccactgtcgt ggcagacagc ggcgatattg agtccattcg
    10921 ccattatcat ccccaggatg ccaccaccaa tccttcgctg ttgctcaagg ctgccggatt
    10981 atcacaatat gagcatttaa tagacgatgc tatcgcctgg ggtaaaaaaa atggcaagac
    11041 ccaggaacaa caggtggtcg cagcgtgtga caaactggcg gtcaatttcg gtgctgaaat
    11101 tctcaaaatc gtacccggtc gcgtgtcaac agaagttgat gcacgcctct cttttgataa
    11161 agaaaagagt attgagaagg cgcgccatct ggtggacttg tatcagcaac aaggcgttga
    11221 gaaatcacgc attctgatca aactggcttc gacctgggaa ggaattagcg cggcagaaga
    11281 gctggaaaaa gaaggtatta actgcaacct gacgctgctg ttttcttttg cccaggcgcg
    11341 ggcctgtgcg gaagcaggcg tttttctgat ttcgccgttt gtcgggcgta tttatgactg
    11401 gtatcaggca cgcaagccga tggccccgta tgtggtggaa gaagatccgg gcgttaaatc
    11461 ggtgcgcaat atctacgact actataagca acaccactat gaaaccattg tgatgggcgc
    11521 gagcttccgt cgcaccgaac aaatcctcgc cttaaccggc tgcgatcgac tgactatcgc
    11581 accgaatttg ctgaaggagc tgcaggaaaa agtttcgcca gtggtacgta aattaatccc
    11641 accttctcag acgttcccac gcccagctcc catgagcgaa gcggagttcc gttgggagca
    11701 caatcaggat gcgatggcgg tagaaaaact gtctgaaggc attcgtctgt tcgccgttga
    11761 tcaacgcaaa ctggaagatc ttcttgccgc caaactataa accagccacg gagtgttata
    11821 tgtcccgaaa agaccttgcc aatgcgattc gcgcactcag tatggatgcg gtacaaaaag
    11881 ccaactctgg tcatcccggc gcgccgatgg gcatggctga tattgccgaa gtgctgtgga
    11941 acgattttct taaacataac cctaccgacc caaccgggta tgatcgcgac cgctttattc
    12001 tttccaacgg tcacgcgtcg atgctgctct acagtttgct gcatctgacc ggttacgacc
    12061 tgccgctgga agagctgaag aacttccgtc agttgcattc gaaaacccca ggccacccgg
    12121 agattggtta tacgcccggt gttgaaacca ccaccggtcc acttggacaa ggtttggcga
    12181 acgccgtcgg actggcgata gcagagcgta cactggcggc gcagtttaat cagccggatc
    12241 atgaaattgt cgatcacttc acctatgtgt ttatgggcga cggctgcctg atggaaggta
    12301 tttcccacga agtctgttcg ctggcgggca cgctaggact gggcaagctg attggttttt
    12361 acgatcacaa cggtatttcg attgatggag aaaccgaagg ctggtttacc gacgatacgg
    12421 caaaacgttt tgaagcctat cactggcatg tgatccatga aatcgacggt cacgatccgc
    12481 aggcggtgaa ggaagcgatc cttgaagcgc aaagcgtgaa agataagccg tcgctgatta
    12541 tctgccgtac ggtgattggc tttggttcgc cgaataaagc aggtaaggaa gaggcgcacg
    12601 gcgcaccact gggggaagaa gaagtggcgc tggcacggca aaaactgggc tggcaccatc
    12661 cgccatttga gatccctaaa gagatttatc acgcctggga tgcccgtgaa aaaggcgaaa
    12721 aagcgcagca gagctggaat gagaagtttg ccgcctataa aaaggctcat ccgcaactgg
    12781 cagaagagtt tacccgacgg atgagcggtg gtttaccgaa ggactgggag aaaacgactc
    12841 agaaatatat caatgagtta caggcaaatc cggcgaaaat cgctacccgt aaggcttcgc
    12901 aaaatacg
//
LOCUS       DADMJE010000121        12895 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.122, whole genome shotgun sequence.
ACCESSION   DADMJE010000121 DADMJE010000000
VERSION     DADMJE010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12895
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.122"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..467
                     /locus_tag="JN001_002994"
     CDS             <1..467
                     /locus_tag="JN001_002994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016233146.1"
                     /note="type IV secretion system coupling protein; similar
                     to F plasmid TraD; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="conjugal transfer protein TraD"
                     /protein_id="HAY9054157.1"
                     /translation="ERPKVAPEFIPRDINPEMENRLSAVLAAREAEGRQMASLFEPDV
                     PEVVSGEDVTQAEQPQQPVSPVINDKKSDSGVNVPAGGIEQELKMKPEEEMEQQLPPG
                     ISESGEVVDMAAYEAWQQENHPDTWQQMQRREEVNINVHRERGEDVEPGDDF"
     gene            complement(476..874)
                     /gene="vapC"
                     /locus_tag="JN001_002995"
     CDS             complement(476..874)
                     /gene="vapC"
                     /locus_tag="JN001_002995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(fMet)-specific endonuclease VapC"
                     /protein_id="HAY9054158.1"
                     /translation="MLKFMLDTNICIFTIKNKPASVRERFNLNQGRMCISSVTLMELI
                     YGAEKSQMPERNLAVIEGFVSRIDVLDYDAAAATHTGQIRAELARQGRPVGPFDQMIA
                     GHARSRGLIIVTNNTREFERVGGLRTEDWS"
     gene            complement(874..1101)
                     /gene="vapB"
                     /locus_tag="JN001_002996"
     CDS             complement(874..1101)
                     /gene="vapB"
                     /locus_tag="JN001_002996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin-antitoxin system antitoxin VapB"
                     /protein_id="HAY9054159.1"
                     /translation="METTVFLSNRSQAVRLPKAVALPENVKRVEVIAVGRTRIITPAG
                     ETWDEWFDGHSVSADFMDNREQPGMQERESF"
     gene            1183..1602
                     /locus_tag="JN001_002997"
     CDS             1183..1602
                     /locus_tag="JN001_002997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative relaxase"
                     /protein_id="HAY9054160.1"
                     /translation="MMSIAQVRSAGSAGNYYTNKDNYYVLGSMGERWAGQGAEQLGLQ
                     GSVDKDVFTRLLEGRLPDGADLSRMQDGSNRHRPGYDLTFSAPKSVSMMAMLGGDKRL
                     IEAHNQAVDFAVRHHPCGGTGLHTDDDGRTVRNGADR"
     gene            1589..6460
                     /gene="traI"
                     /locus_tag="JN001_002998"
     CDS             1589..6460
                     /gene="traI"
                     /locus_tag="JN001_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005079803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugative transfer relaxase/helicase TraI"
                     /protein_id="HAY9054161.1"
                     /translation="MLTGNLVMALFNHDTSRDQEPQLHTHAVVTNVTQHNGEWKTLSS
                     DKVGKTGFIENVYANQIAFGRLYREKLKEQVEALGYETEVVGKHGMWEMPGVPVEAFS
                     GRSQTIREAVGEDASLKSRDVAALDTRKSKQHVDPEVRMAEWMQTLKETGFDIRAYRD
                     AAEQRAYTRTQTPGPASQDGPDVQQAVTQAIAGLSERKVQFMYTDLLARTVGILPPEN
                     GVIERARAGIDEAISREQLIPLDREKGLFTSGIHMLDELSVRALSRDIMKQNRVTVHP
                     EKSVPRTAGYSYAVSVLAQDRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIA
                     ADRRSQMNLKQDERLSGELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGA
                     ARHNVQVLITDSGQRTGTGSALMAMKDAGVNTYRWQGGEQRPATIISEPDRYVRYARL
                     AGDFAASVKAGEESVAQVSGVREQAILTQAIRSELKTQGVLGHPEVTMTALSPVWLDS
                     RSRYLRDMYRPGMVMEQWNPETRSHDRYVTERVTAQSHSLTLRNAQGETQVVRISSLD
                     SSWSLFRPEKMPVADGERLRVTGKIPGLRVSGGDRLQVASVSEDAMTVVVPGRAEPAT
                     LPVSDSPFTALKLENGWVETPGHSVSDSATVFASVTQMAMDNATLNGLARSGRDVRLY
                     SSLDETRTAEKLARHPSFTVVSEQIKARAGETLLETAISLQKAGLHTPAQQAIHLALP
                     VLESKNLAFSMVDLLTEAKSFAAEGTGFADLGGEINAQIKRGDLLYVDVAKGYGTGLL
                     VSRASYEAEKSILRHILEGKEAVTPLMERVPGELMEKLTSGQRAAARMILETSDRFTV
                     VQGYAGVGKTTQFRAVMSAVNMLPESERPRVVGLGPTHRAVGEMRSAGVDAQTLASFL
                     HDTQLQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTDQLQA
                     IAPGQPFRLQQTRSAADVVIMKEIVRQTPELREAVYSLINRDVERALSGLERVKPSQV
                     PRLEGAWAPEHSVTEFSHSQEAKLAEAQQKAMLKGEAFPDVPMTLYAAIVRDYTGRTP
                     EAREQTLIVTHLNEDRRVLNSMIHDAREKAGELGQVQVMVPVLNTANIRDGELRRLST
                     WENNPDALALVDNVYHRIAGISKDDGLITLQDAEGNTRLISPREAVAEGVTLYTPDTI
                     RVGTGDRIRFTKSDRERGYVANSVWTVTAVSGDSVTLSDGQQTRVIRPGQERAEQHID
                     LAYAITAHGAQGASETFAIALEGTEGNRKLMAGFESAYVALSRMKQHVQVYTDNRQGW
                     TDAINNAVQKGTAHDVFEPKPDREVMNAERLFSTARELRDVAAGRAVLRQAGLAGGDS
                     PARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGNGLRGFSGEGRVKGSGDA
                     QFVALQGSRNGESLLADNMQDGVRIARDNPDSGVVVRIAGEGRPWNPGAITGGRVWGD
                     IPDNSVQPGAGNGEPVTAEVLAQRQAEEAIRRETERRADEIVRKMAENKPDLPDGKTE
                     QAVREIAGQERDRAAITEREAALPESVLREPQRVREAVREVARENLLQERLQQMERDM
                     VRDLQKEKTPGGD"
     gene            6480..7226
                     /gene="traX"
                     /locus_tag="JN001_002999"
     CDS             6480..7226
                     /gene="traX"
                     /locus_tag="JN001_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858383.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type-F conjugative transfer system pilin
                     acetylase TraX"
                     /protein_id="HAY9054162.1"
                     /translation="MTTDNTNTTRNDSLAARTDTWLQSFLVWSPGQRDIIKTVALVLM
                     VLDHINLIFQLKQEWMFLAGRGAFPLFALVWGLNLSRHAHIRQPAINRLWGWGIIAQF
                     AYYLAGFPWYEGNILFAFAVAAQVLTWCETRSGWRTAAAILLMALWGPLSGTSYGIAG
                     LLMLAVSNRLYRAEDRAERLALVACLLAVIPALNLATSDAAAVAGLVMTVLTVGLVLC
                     AGKSLPRFWPGDFFPTFYACHLAVLGVLAL"
     gene            7281..7841
                     /locus_tag="JN001_003000"
     CDS             7281..7841
                     /locus_tag="JN001_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fertility inhibition protein FinO"
                     /protein_id="HAY9054163.1"
                     /translation="MTEQKRPVLTLKRKTEGTATVRSRKTIINVTTPPKWKVKKQKLA
                     EKAAREAELAAKKAQARQALSIYLNLPTLDEAVNTLKPWWPGLFDGDTPRLLACGIRD
                     VLLEDVAQRNIPLSHKKLRRALKAITRSESYLCAMKAGACRYDTEGYVTEHISQEEEA
                     YAGARLAKIRRQNRIKAELQAVLDEK"
     gene            7972..8184
                     /locus_tag="JN001_003001"
     CDS             7972..8184
                     /locus_tag="JN001_003001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANR family transcriptional regulator"
                     /protein_id="HAY9054164.1"
                     /translation="MNGFRNSSRNGQVWRYQRAGGRAVILEVSGRWMEAAEAWRRAAC
                     VAPRTDWQQFARKRAEHCHRRCRGRG"
     gene            8368..8889
                     /locus_tag="JN001_003002"
     CDS             8368..8889
                     /locus_tag="JN001_003002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001302180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HAY9054165.1"
                     /translation="MLHYSGGLKYRCHLSDMENNMRKYIPLVLFIFSWPVLSADIHGR
                     VVRVLDGDTIEVMDSLKAVRIRLVNIDAPEKKQDYGRWSTDMMKSLVAGKTVTVTYFQ
                     RDRYGRILGQVYAPDGMNINQFMVRAGAAWVYEQYNTDPVLPVLQNEARQQKRGLWSD
                     ADPVPPWIWRHRK"
     gene            8935..9144
                     /gene="hha"
                     /locus_tag="JN001_003003"
     CDS             8935..9144
                     /gene="hha"
                     /locus_tag="JN001_003003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_958726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin expression modulator Hha"
                     /protein_id="HAY9054166.1"
                     /translation="MAKTKQEWLYQLRRCSSVNTLEKIIHKNRDSLSNSERESFNSAA
                     DHRLAELITGKLYDRIPKEIWKYVR"
     gene            9183..9773
                     /locus_tag="JN001_003004"
     CDS             9183..9773
                     /locus_tag="JN001_003004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2726 domain-containing protein"
                     /protein_id="HAY9054167.1"
                     /translation="MKLIIFILIVLIIAALLIRIILRSVNQHSPLLMQLHAAGIRTGD
                     AERILSSGEYWQRQTTLLTEREVSFMKGLFRIVDMTRWYLCPQVRVADIVQLNGNIRP
                     RSRQWWQLFRMVSQWHVDVVIVELRSFSIVAAVELDDASHLRPERRRRDILLEEVLRQ
                     AGIPLLRSHDARKLLQMTGEWLNTTGADQQSPEHRS"
     gene            10013..10273
                     /locus_tag="JN001_003005"
     CDS             10013..10273
                     /locus_tag="JN001_003005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication regulatory protein RepA"
                     /protein_id="HAY9054168.1"
                     /translation="MSQTENAVTSSLSQKRFVRRGKPMTDSEKQMAAVARKRLTHKEI
                     KVFVKNPLKDLMVEYCEREGITQAQFVEKIIKDELQRLDILK"
     gene            10497..10571
                     /locus_tag="JN001_003006"
     CDS             10497..10571
                     /locus_tag="JN001_003006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RepA leader peptide Tap"
                     /protein_id="HAY9054169.1"
                     /translation="MPGKVQDFFLCSLLLRIVSAGWCD"
     gene            10564..11421
                     /gene="repA"
                     /locus_tag="JN001_003007"
     CDS             10564..11421
                     /gene="repA"
                     /locus_tag="JN001_003007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858393.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="incFII family plasmid replication initiator
                     RepA"
                     /protein_id="HAY9054170.1"
                     /translation="MTDLQQTYYRQVKNPNPVFTPREGARTLPFCGKLMEKAVGFTSR
                     FDFAIHVAHARSLGLRRRMPPVLRRRAIDALLQGLCFHYDPLANRVQCSITTLAIECG
                     LATESAAGKLSITRATRALTFLAELGLITYQTEYDPLIGCYIPTDITFTSALFAALDV
                     SEEAVAAARRSRVEWENRQRKKQGLDTLGMDELMAKAWRFVRERFRSYQTELKSRGMK
                     RARARRDADRQRQDIVTLVKRQLTREISEGRFTASREAVKREVERRVKERMILSRNRN
                     YSRLATASP"
     gene            complement(12473..12736)
                     /locus_tag="JN001_003008"
                     /pseudo
     CDS             complement(12473..12736)
                     /locus_tag="JN001_003008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484486.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
BASE COUNT         3119 a         3258 c         3810 g         2708 t
ORIGIN      
        1 aggaacgacc gaaggtcgct ccggagttta ttccgcgtga catcaacccg gaaatggaga
       61 accgtctgag tgccgtactt gccgcaaggg aagcagaagg tcgtcagatg gccagcctct
      121 tcgaaccgga tgtcccggag gttgtttccg gagaagacgt gactcaggct gaacagccgc
      181 aacagccggt gtctcctgtc atcaacgata agaagtcaga ttcaggtgtg aatgttccgg
      241 caggggggat cgagcaggag ctgaaaatga aaccggaaga agagatggaa cagcaactgc
      301 cacccgggat cagtgaatcc ggtgaagtgg tggatatggc cgcttatgag gcatggcagc
      361 aggaaaatca tccggacacc tggcagcaga tgcagcgtcg tgaagaggtg aacatcaatg
      421 tgcaccggga acgcggggag gatgttgagc cgggagatga tttctgatga acaggtcagc
      481 tccagtcttc agttctcagg ccgcccacac gttcaaattc ccgggtgtta ttagtcacaa
      541 taatcagccc ccgactgcgg gcatgacctg cgatcatttg atcaaatggc ccgacagggc
      601 gtccctgacg ggcaagttct gctcttatct ggccggtgtg tgtggctgca gcagcgtcgt
      661 aatccagaac atcaatgcgg gaaacaaatc cctcgatcac agcgagatta cgttcaggca
      721 tctggctttt ttctgcacca tatatcagct ccatcagggt gaccgaactg atacacattc
      781 tcccctggtt caggttaaaa cgctccctga cgctggcggg tttgttcttt atcgtaaaaa
      841 tgcagatgtt ggtatcgagc ataaacttca gcatcagaat gactcccttt cctgcatgcc
      901 gggctgttcc ctgttatcca taaaatcggc gctgacgctg tgtccgtcga accattcgtc
      961 ccatgtctct ccggctggcg taatgattct ggttcgtccg acagcaatca cttcaacgcg
     1021 ttttacgttt tccggcaatg caaccgcttt tggcagtctg accgcctggc tgcggttgct
     1081 gagaaatacg gtggtttcca ttatttgcct ccttatgtgg atatgtcttg tgtatatcca
     1141 ttgtgggatt gatgccggga tatgtcaaag ggatatacgt ttatgatgag tatcgcgcag
     1201 gtcagatcgg ccggaagtgc cggtaattat tataccaaca aggataatta ctatgtgctg
     1261 ggcagcatgg gagaacgctg ggccggccag ggggctgaac aactggggct gcagggcagt
     1321 gtcgataagg atgtctttac ccgccttctg gagggcaggc tgccggacgg ggcggattta
     1381 agccgcatgc aggatggcag taacaggcat cgtcccggct acgacctgac cttctccgct
     1441 cccaaaagtg tctccatgat ggccatgctc gggggggaca aacgtcttat tgaagcacat
     1501 aaccaggccg tggattttgc tgtccgtcat cacccgtgtg gaggcactgg cctccacacg
     1561 gatgatgacg gacggacagt cagaaacggt gctgaccggt aatctggtga tggcactgtt
     1621 taaccacgac accagtcgcg atcaggaacc acagttacac acgcatgcgg tggtgactaa
     1681 tgttacgcag cataacggcg aatggaagac actgagcagt gacaaagtgg ggaaaacggg
     1741 gttcattgag aatgtgtacg ctaatcagat tgcctttggc aggctctacc gggaaaaact
     1801 gaaagagcag gttgaggcgc tgggctatga aactgaagtg gtcggtaagc acggtatgtg
     1861 ggaaatgccg ggtgtaccgg tggaggcctt ttccggacgc tcacagacta tccgggaggc
     1921 cgtcggggaa gacgcctcgc tgaaatcccg ggatgtggcg gcgctggata cgcgtaaatc
     1981 caaacagcac gtcgatcctg aagtcagaat ggccgagtgg atgcagacgc tgaaggaaac
     2041 cgggttcgac atccgggcat atcgtgacgc agcggaacaa cgggcatata cccgcacgca
     2101 gacacccgga cccgcttcac aggacgggcc ggatgtgcag caggcggtga cacaggccat
     2161 tgccggatta agtgaacgca aagtgcagtt tatgtatacg gacctgctgg ccaggacggt
     2221 cggcatactg ccgccggaaa atggtgtgat tgaacgggca cgcgccggta tcgatgaggc
     2281 catcagccgt gagcagctta tccccctcga tcgtgagaag gggctgttca cgtccgggat
     2341 tcatatgctc gatgagctgt cagtccgggc actcagtcgt gacatcatga aacagaaccg
     2401 ggtgaccgta catccggaga aaagtgtccc ccggacggcc ggttacagct atgccgtcag
     2461 tgttctggca caggaccgtc cgtcgctggc cattgtgtcc gggcagggcg gtgcagccgg
     2521 gcagcgtgag cgggtggctg aactggtcat gatggcccgg gagcaggggc gggaggtgca
     2581 gattatcgct gctgaccgtc gctcgcagat gaacctgaag caggatgaac ggctgtccgg
     2641 tgaactgata accggacgtc gtcagttgct ggaaggcatg gccttcacgc cgggcagtac
     2701 cgttatcgtc gaccagggcg aaaaactctc cctgaaagag acgttaaccc tgctggatgg
     2761 tgccgcacgt cataacgtac aggtcctgat aactgacagc gggcagcgaa ccggtacagg
     2821 cagtgcactg atggccatga aggatgccgg ggtgaacaca tatcgctggc aggggggaga
     2881 acagcgaccg gccaccatca tcagtgaacc ggaccgttat gtccgctatg cccggctggc
     2941 cggagatttt gcggccagcg tgaaagccgg agaagagagc gtggcacagg tcagcggagt
     3001 acgggaacag gccatactga cacaggccat tcgcagtgag ctgaaaacac agggcgtgct
     3061 cggacacccg gaggtaacca tgaccgccct gtcaccggtc tggctggaca gccggagccg
     3121 ttatctgcgg gatatgtacc gcccgggaat ggtgatggag cagtggaacc cggagacacg
     3181 cagtcatgac cgctatgtga cagaacgtgt gacggcgcag agtcacagcc tgaccctgcg
     3241 gaatgcgcag ggcgaaacgc aggtggtgcg tatttcttcc ctggacagca gctggtcgct
     3301 gttccggccg gaaaaaatgc cggtggcaga cggtgagcgt ctgagggtga cagggaaaat
     3361 tcccggactc cgcgtctccg gcggtgaccg cctgcaggtg gcatccgtca gtgaagatgc
     3421 gatgacggtt gttgtgccgg gacgggctga accggccacc ctgcctgtga gcgattcacc
     3481 gttcacggca ctgaagctgg agaacggctg ggtggaaacg cccgggcatt ccgtcagcga
     3541 cagtgcgacg gtttttgcct ccgtcacaca gatggcaatg gacaatgcca ccctgaacgg
     3601 tctggcccgc agtggtcgtg atgtccggct gtattcctca ctggatgaaa cccgtactgc
     3661 ggaaaaactt gcccgccatc cttcctttac ggtggtttct gagcagataa aggcgcgtgc
     3721 cggtgagaca ttgctggaaa ccgctatcag tctgcagaaa gccgggcttc acacgccggc
     3781 acagcaggcc attcatctgg cccttcctgt gctggaaagt aaaaacctgg ccttcagcat
     3841 ggtggacctg ctgacagagg cgaagtcgtt tgctgcagaa ggaaccggtt ttgctgacct
     3901 gggaggggaa atcaatgcgc agataaaacg gggtgattta ctgtatgtgg atgtggcaaa
     3961 aggctatggc acaggcctgc tggtttcccg tgcgtcgtat gaggcagaaa agagcattct
     4021 tcgccatatt ctcgaaggta aggaggcggt cacgccgctg atggagagag tacctggcga
     4081 actcatggag aaactgacat caggacagcg cgccgccgcc cgtatgatac tggaaacgtc
     4141 cgaccgtttc acggtggtgc agggctatgc cggtgtgggt aagaccacac agttccgggc
     4201 ggtgatgtca gccgtgaaca tgctgccgga gagtgaacgt ccccgtgtcg tggggctggg
     4261 gcccacacac cgtgcggtcg gggagatgcg cagcgccggc gtggatgcac agacactggc
     4321 gtcctttctg catgacacgc agctgcagca gcgcagcgga gaaacgccgg atttcagcaa
     4381 cacgctgttc cttctcgatg agagctctat ggtgggcaat accgacatgg cacgggcata
     4441 cgccctgatt gcggccggtg gcggtcgggc tgtggccagc ggtgacacgg accagctgca
     4501 ggccatcgcg cccggtcagc ctttccgtct ccagcagacg cgcagtgctg ccgatgtggt
     4561 catcatgaag gagattgtgc gtcagacgcc ggaactgcgg gaggcggtat acagcctgat
     4621 taaccgggat gtggaaaggg cgctgtccgg gcttgagcgt gtgaaaccgt ctcaggtgcc
     4681 acgtctggag ggcgcatggg caccggagca ctccgtgacg gagttcagtc acagccagga
     4741 agcgaaactg gcagaagcgc agcagaaggc gatgctgaaa ggcgaggctt ttccggatgt
     4801 ccccatgaca ctgtatgcag ccattgtccg cgactatacc ggcaggacac cggaagcacg
     4861 ggagcagacg ctgattgtca cgcacctgaa tgaggaccgg cgcgtactga acagcatgat
     4921 tcatgatgca cgggaaaagg ccggagaact ggggcaggtg caggtcatgg tgcctgtcct
     4981 gaacacagcg aatatacgcg acggggagct gcgtcgtctc tccacctggg agaataaccc
     5041 ggatgccctt gccctggtgg ataatgtgta tcaccggatt gccggtatca gcaaggatga
     5101 cgggctgata accctgcagg atgcggaagg taacacgcgg ctgatttcgc cccgggaggc
     5161 ggtggctgaa ggcgtcacgc tgtacacccc ggacaccatc cgggtgggga ccggtgacag
     5221 gatacgcttc acgaagagtg accgggagcg cggttatgtg gccaacagcg tctggacggt
     5281 gacagcggtt tccggtgaca gtgtcacact ttctgacggt cagcagaccc gtgtgattcg
     5341 ccccggtcag gagcgggcag agcaacatat tgacctggcc tatgccatca ccgcccacgg
     5401 tgcacagggg gcgagtgaaa cctttgccat cgcgcttgaa ggcacggaag gtaaccggaa
     5461 actgatggcc ggctttgagt cagcctacgt ggccctgtcg cgtatgaagc agcatgtgca
     5521 ggtgtacacc gataaccgtc agggctggac ggatgccatc aacaatgccg tacagaaagg
     5581 aactgcccac gatgtgtttg agccgaaacc ggaccgggag gtcatgaatg cagagcggct
     5641 gttcagtacg gcgcgggagc tgcgggacgt ggcggcaggc cgtgccgttc tccgtcaggc
     5701 ggggctggcc gggggagaca gtcctgcacg gtttattgct ccgggacgta aatatccgca
     5761 accgtatgtg gcactgccgg cgtttgaccg taacggcaag tccgccggta tctggctgaa
     5821 cccgctgacc acggatgacg gaaacgggct gcggggattc agcggtgaag gtcgggtaaa
     5881 aggcagcggg gatgcgcagt tcgtggctct gcagggcagc cgtaacggag aaagcctgct
     5941 ggctgataat atgcaggatg gcgtccggat tgcccgtgat aatcctgaca gtggtgtggt
     6001 ggtaagaatc gccggtgaag gccgtccgtg gaatcccggt gccatcaccg gtggccgcgt
     6061 gtggggggat atcccggaca acagcgtcca gccgggagcc ggaaatggcg aaccggtcac
     6121 ggcagaggta ctggcacagc ggcaggctga agaggccatc cgccgtgaaa cggaacgtcg
     6181 cgcagatgaa attgtccgta aaatggcaga gaacaaacct gacctgccgg acggcaaaac
     6241 agagcaggct gtcagggaaa ttgccgggca ggagcgtgac cgggctgcca taactgaacg
     6301 ggaagccgcg ctgccggaga gtgtactgcg tgaaccacaa cgggtgcggg aagcggtccg
     6361 ggaagttgcc cgggaaaatt tgctgcagga gcgtctgcag cagatggagc gggatatggt
     6421 tcgtgacctg cagaaagaga aaaccccggg cggagactga tacaggaaga caaacactga
     6481 tgacaacgga taacacgaac acgacacgta acgattcact ggctgcacgg accgatacct
     6541 ggttgcagtc atttctggtc tggtcacccg gacagcggga tatcatcaaa acggtggcac
     6601 tggtgctgat ggtactggac cacatcaatc tgatattcca gctgaagcag gaatggatgt
     6661 ttctggccgg gcgaggagcc tttccgcttt ttgccctggt gtgggggctg aatctgtccc
     6721 gtcatgcgca tatccggcaa ccggccatta accggctgtg gggatgggga attattgccc
     6781 agttcgcata ttatctggca ggctttccct ggtatgaggg gaatatcctg tttgcctttg
     6841 cagtggcggc acaggtgctg acgtggtgtg aaacgcgcag tgggtggcgt acagcagcgg
     6901 ccatactcct gatggccctg tgggggcctt tgtccggcac cagttacggt attgccgggt
     6961 tgctgatgct ggcagtcagc aaccggctgt accgggcgga agacagagcg gaacgtctgg
     7021 cgctggtcgc ctgcctgctg gctgttattc cggcgcttaa ccttgccacc agtgatgcag
     7081 cggcggtggc cggtcttgtg atgacggtgc tgaccgttgg tctggtgttg tgtgccggaa
     7141 aatcattacc ccgtttctgg cccggagact ttttcccgac gttctatgcc tgtcatctgg
     7201 ctgtgctggg cgttctggcg ctgtgacggg tgtggtatct ttggccgcaa gaggatgatt
     7261 cgtcagaggc agaacacagc atgacagagc agaagcgacc ggtactgaca ctgaagcgga
     7321 agacagaggg aacagcgact gtccgcagcc ggaaaaccat catcaatgtc accacgccac
     7381 caaagtggaa ggtgaaaaag cagaagctgg ccgagaaagc ggcccgtgaa gcagagctgg
     7441 cggcaaaaaa agcgcaggcc agacaggcgc tgtccattta tctgaacctg cccacgctgg
     7501 atgaggctgt gaataccctg aagccctggt ggccgggatt atttgacggt gacacgcccc
     7561 ggcttctggc ctgcggtatc cgggacgtgt tactggaaga cgtggcgcag cggaatatcc
     7621 cgctctcgca taaaaaactg cgcagggcgc tgaaggccat cacccgttca gaaagctatc
     7681 tgtgtgccat gaaagccggt gcctgccggt atgacacgga agggtatgtg acggagcata
     7741 tttctcagga ggaggaagcg tatgcgggag cgcgtctggc gaaaattcgt cgccagaacc
     7801 ggataaaggc agaacttcag gccgtgcttg atgagaaata aaaaaagcct cccccagaga
     7861 gaggaggcag ggaaataagg cttaaaagga aataacttcc gcttccgaaa ggaagccagt
     7921 ccactgaatt atttatcaca ataatactga caactaaagg gggacaagaa aatgaatgga
     7981 ttcagaaaca gttcacggaa cggccaggtc tggcgttacc agcgtgccgg cgggcgggcc
     8041 gttattctgg aagtcagtgg acgctggatg gaagcggcag aagcatggcg acgggctgcc
     8101 tgtgttgcgc ctaggacaga ctggcagcag tttgcccgga aaagggctga acactgccac
     8161 cggcgctgcc ggggaagggg gtaacgaaaa aagcagcctt cattactcca ggagtcagaa
     8221 ggctgaaagg agtttatgag atttgcttct taatatccgg tcgggcagta tgaccggaca
     8281 gttctgagta gcacagagtc ttttccgcat taagtcgatt ttttatattt tgtgattaat
     8341 ttcacaaaat aaggtgttat tcaatgtgtg ctgcactatt caggggggct gaaatacagg
     8401 tgccatttat ctgatatgga gaataacatg aggaaatata ttccactggt attatttatc
     8461 ttttcatggc cggtattgtc tgcagatatt catggacggg ttgttcgtgt actggacggt
     8521 gataccatcg aggtcatgga ctcactgaag gcggtgcgga tcaggctggt aaatattgat
     8581 gcaccggaaa agaaacagga ttatggccgg tggtcaacag acatgatgaa atcactggtt
     8641 gcaggaaaaa cggttaccgt cacatatttt cagcgagatc gttatggtcg tattctcggg
     8701 caggtttatg caccagacgg aatgaatatt aatcagttta tggtccgggc cggggctgcc
     8761 tgggtatatg agcagtacaa cacagatccc gtgctacctg tccttcagaa cgaagccaga
     8821 caacaaaaac gtgggctctg gtcagatgct gatccggttc ccccctggat atggaggcac
     8881 cgtaaataaa gcgatggcaa tcctatcatt catctgttct cagcgggaat aaaaatggca
     8941 aaaacaaaac aggaatggct gtatcagtta cggcgatgtt catcagtcaa tacgctggaa
     9001 aaaattattc ataaaaacag agacagttta tcaaacagtg aacgtgaatc atttaattca
     9061 gcagcagacc accggctagc ggaattaatc accggaaagt tatatgacag gataccaaaa
     9121 gagatatgga aatatgtaag gtaataattc agcaataatt aattgccagg agcagataaa
     9181 taatgaagtt gattattttt attctcattg ttctgattat tgcagcgcta cttatccgga
     9241 ttatcctcag aagtgtaaat cagcattctc ctttgctgat gcaattgcat gcggcaggta
     9301 tacggaccgg tgatgcagag cgaatactgt ccagcggtga atactggcaa cgtcagacga
     9361 cgctgctgac agaaagggaa gtcagtttta tgaaaggact gttcagaatt gtggatatga
     9421 cgcggtggta tctgtgtccg caggtacggg tcgcggatat cgtccagctg aacgggaata
     9481 tccggccacg atcacgccag tggtggcagt tattcaggat ggtgtctcag tggcatgttg
     9541 atgtggttat cgttgagctg cgttcgttca gtattgttgc agcagtagag ctggatgatg
     9601 ccagccattt acgaccggaa cgcagacgcc gggatattct tctggaagag gttctgaggc
     9661 aggctggtat tccgttgctc agaagccacg atgccagaaa actgctgcag atgaccggag
     9721 aatggctgaa tacaacaggg gctgatcagc agtcaccgga acatcgtagc tgacgccttc
     9781 acgttgctca gttgtccaac cccggaaacg ggaaaaagca agttttcctc gctcccggcg
     9841 tttccataac tgaaaaccat actatttcac agtttaaatc acattaaacg acagtaatcc
     9901 ccgttgattt gtgcgccaac acagatcttc gccacaattc tcaagtcgct gatttcaaaa
     9961 aactgtagta tcctctgcga aacgatccct gtttgagtat tgaggaggcg agatgtcgca
    10021 gacagaaaat gcagtgactt cctcattgag tcaaaagcgg tttgtgcgca gaggtaagcc
    10081 tatgactgac tctgagaaac aaatggccgc tgttgcaaga aaacgtctta cacacaaaga
    10141 gataaaagtt tttgtcaaaa atcctctgaa agatctcatg gttgagtact gcgagagaga
    10201 ggggataaca caggctcagt tcgttgagaa aatcatcaaa gatgaactgc agagactgga
    10261 tatactaaag taaagacttt actttgtggc gtagcatgct agattactga tcgtttaagg
    10321 aattttatgg ctggccacgc cataaggtgg cagggaactg gttctgatgt agatgtacag
    10381 gagccagaaa agcaaaaacc ccgataatct tctttaactt tggcgagtca gaaagattac
    10441 cggggcccac ttaaaccgta tagccaacaa tcaagctatg cggggagtat agttatatgc
    10501 ccggaaaagt tcaagacttc tttctgtgct cgctccttct gcgcattgta agtgcaggat
    10561 ggtgtgactg atcttcaaca aacttattac cgccaggtaa agaacccgaa tccggtgttc
    10621 acaccccgtg aaggtgcccg gacgcttccg ttctgcggga aactgatgga aaaggcggtg
    10681 ggcttcacct cccgttttga tttcgccatt catgtggcac atgcccgttc gcttggtctg
    10741 cgtcggcgca tgccaccggt actacgtcgc cgggccattg atgcgctgct gcaggggctg
    10801 tgttttcact atgacccact ggccaaccgc gtccagtgtt ccatcaccac gctggccatt
    10861 gagtgcggac tggcgacgga gtctgctgcc ggaaaactct ccatcacccg ggccacccgg
    10921 gccctgacgt tccttgcaga gctgggactg attacctacc agacggaata tgacccgctt
    10981 atcgggtgct acattccgac cgatatcacg ttcacatctg cactgtttgc tgccctcgat
    11041 gtatcagagg aggcagtggc cgccgcgcgc cgcagtcgtg tggaatggga aaacagacag
    11101 cgcaaaaagc aggggctgga taccctgggt atggatgaac tgatggcgaa agcctggcgt
    11161 tttgttcgtg agcgtttccg cagttaccag acagagctta agtcccgtgg aatgaagcgt
    11221 gcccgtgcgc gtcgtgatgc ggacaggcag cgtcaggata ttgtcaccct ggtgaaacgg
    11281 caactgacgc gtgaaatctc ggaagggcgc ttcactgcca gtcgtgaggc ggtaaaacgt
    11341 gaagtggagc gtcgtgtgaa ggagcgcatg attctgtcac gtaaccgtaa ttacagccgg
    11401 ctggccacag cttccccctg aaagtgacct cctcagaata atccggcacg cgccggaggc
    11461 attcgcacgc ctgaagcccg ccagtgcaca aaaaatcagc gctacataca aaaaacaacc
    11521 tcatcatcca ccttctggtg catccggtcc cccctgtttt tgatacaaaa cacgcctcac
    11581 agacggggaa ttttgcttat ccacattaaa ctgcaaggga cttcaccata aggttacaac
    11641 cgttcacgtc ataaagcgcc agccgtcagc cctacagggt gcaatgtatc ttttaaacac
    11701 ctgtttatat ctcctttaaa ctacttaatt acattcattt aaaaagaaaa cctgttcact
    11761 gcctgtctgt ggacagacag atatgcacct cccaccacaa gcggcgggcc ccgaccgaag
    11821 ccggtttagt tacaacatgc aaacataaac ccctaaaaaa cccaagtccg acgcagaact
    11881 gaaaccacaa agcccctccc tcataactga aaagcggccc cgccccggcc cgaagggccg
    11941 gaacagagtc gcttttaatt atgaatgttg taactatatt atcatcgctg tcagtcctct
    12001 ggctggacgt atcgagtaca cgctcgtaag cggccctcac ggccctcacg gcccgctaac
    12061 gcggagatac gccccgactg cgggtaaacc cttgtcgggc tccgaccgcg cacagaagct
    12121 ctgtcatagc tgaaaacggg tatggcttgg cagctaccat gttctgtcaa gaaaaatcgc
    12181 ttgaactccg acgtacagcc ccctaagtac tgccagcaag ctgtcagcac taagtccccg
    12241 atacagcgcg gcatagccgc gctaacgggg ttaaaagggc ttacctatac ttcatcatcg
    12301 ctgaaagccc gcatggcctc gcagggcaga gatgggatag gtgaaaccta tcaatacgta
    12361 ccggcttacg ccgggcttcg gcggtgttac tcctgtacca tatgtaacta catcatgccg
    12421 ccttacatgc gctacgcgca tatgaagaca aatagcccac atcaaacggt ttttaggtct
    12481 tcagtacgcc atagcaccag tgcacgagtt ttctcatcag cgcaccaatg gcacacattt
    12541 tggccttacc tctcaggcat aatcgctcat acatcgcttt catcaatggg ttaaatctca
    12601 gaccacacaa cgaagccaga tacagtttcg cccggatttc cggcggacca atttttgaca
    12661 gtttcggaca ccctctgacc gaggtgccgg aatatttttc aacgggaacg acacctaaaa
    12721 atgcagccgc ctgttcacgt ataggaaatt gaaaaaccag acgataccgc tgtccacgcc
    12781 ttatgccacg tgagcttttc tgcttttccc tccactccgg tgttttctct ctctgcatgg
    12841 tcgattctta taccgcaaca ggctgttttt tatacttgca ccgattcccg ggcac
//
LOCUS       DADMJE010000122        12730 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.123, whole genome shotgun sequence.
ACCESSION   DADMJE010000122 DADMJE010000000
VERSION     DADMJE010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12730
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.123"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..156
                     /locus_tag="JN001_003009"
     CDS             <1..156
                     /locus_tag="JN001_003009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054171.1"
                     /translation="ILQLCRNDSLMIGRESFSVDRITPDDGGCSYIRLRREGAGNVRA
                     GGYYEGA"
     gene            143..730
                     /locus_tag="JN001_003010"
     CDS             143..730
                     /locus_tag="JN001_003010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001214489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054172.1"
                     /translation="MRGLENAIRNLNSLDTRMVPQASAWAVNRVAAKVVSVATRQVAR
                     NTVAGDNQVKGGPLKLVRQRVRVFKASPAGKMYARIRVNRGNLPAIKLGTTCRRAGDG
                     LKVGKYFFRGAFIQQLANGRWHVLRRLPEACFETGKDSKGRPRKNRLPVEVVKIPLAG
                     PLTQAFEDARDRIIAAEMPKQLGYALKQQLRIHLG"
     gene            727..1128
                     /locus_tag="JN001_003011"
     CDS             727..1128
                     /locus_tag="JN001_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054173.1"
                     /translation="MNRHTQIRQAVLASLKGECGGNVVLFDGLPAFIDAQELPAVAVW
                     LSDAQYTGKMTDEDDWQAVLHIAVFVRAQAPDSELDTWMENTIFPAMKDIPVLSGLID
                     TMIPLGFNYQRDNEMATWAMAEITYQITYTN"
     gene            1139..1879
                     /locus_tag="JN001_003012"
     CDS             1139..1879
                     /locus_tag="JN001_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707740.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054174.1"
                     /translation="MTTPNPLAKTKGAGTTFWMYTGKGDAFANPLSDTDWLRLAMVKD
                     LQPGEMTADAEDDTYLDDEDADWKTTTQGQKSVGDTLATLAWRPGDSGQKKLVQLFDS
                     GEVCAFRIKYPNGTVDVFRGWLSSLGKTITSKEVMTRTVKISGVGRPYLAEEGAETVG
                     VTGLTVAPASVSVKAGATTTLTFTVKPDGASDKAISVHSSDPQTASVTLSGLVATVKG
                     VKQGSVSIVGMTSDGEFVAVAAVTVSAP"
     gene            1938..2324
                     /locus_tag="JN001_003013"
     CDS             1938..2324
                     /locus_tag="JN001_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707739.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein G"
                     /protein_id="HAY9054175.1"
                     /translation="MFLKQDTFNYEKQSVVLSELSGLQRIEYLTFVQQRTAKFDAQEG
                     ELPEAERQIAFLRMGMDINAWLVSRSLWNAEQSQDVETLCASIMTTWSYDALGAGAER
                     VLSLSGMGTIENAGDDDHEALTPEKS"
     gene            2333..2661
                     /locus_tag="JN001_003014"
                     /pseudo
     CDS             2333..2661
                     /locus_tag="JN001_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308863.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly protein T"
     gene            2633..5674
                     /locus_tag="JN001_003015"
     CDS             2633..5674
                     /locus_tag="JN001_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY9054176.1"
                     /translation="MDQIANLVIDLGIDAAEFKNEIPRIKNLLNGAAGDAERSSARMQ
                     RFMERQTQAARQTMHAASSAATAASAHAQTVEKNARAHERMAREVEQTRLRVDALNQK
                     MREEQAQARALAEAQDKAAAAFYRQIDSVKQAGAGLQELQRIQQQIRQARNSGGVGQQ
                     DYLALISEITAKTRALTQAEEQATRQKAAFIRQLKEQATRQNLSSSELLRARAAQLGV
                     SSAAEVYIRKMERAGKATHSLGLKSAAARRELGVLISQMARGNFGALRGSGITLANRA
                     GWTGALMSPKGMMTGGVIGGLVAAVLGLGKAWHDGRKEGEEFNRQLALTGHYAGVTVG
                     QLWKLSRAISGNGITQHAAAGALAQVVGSGAFHGNDIGMVAKAAAQMERSVGQSVSDT
                     INQFKRLKDDPVNAAKALDNALHFLTATQLEQIRVLGEQGRSSDAARIAMSALAEETG
                     KRTSDIDNNLNALGSTLQTLSDWWKQFWDAAMNIGREDSLDAQIDALQEKIQRAKKYP
                     WTNASTQVEYDQQRLNDLQEKKRRKDLQDAKAQAERNYQEQQKRRNAENAALNRMNET
                     EAARHQREIARINAMQYADQAVRDAAIQRENERYEKAIKKNTRATRNDEATRLLLQYS
                     QQQAQVEGQIAAARQSAGIATERMTEAHKQLLALQQRISDLDGKKLTADEKSVLARKN
                     ELIQALTLLDVKQQELQKQTALNDLRKKTVQLTSQLADKERALREQHNLDIATAGMGD
                     KQRQRYQAQLRIRQEYRQQLQQLENDSRQKGTYGTEDYRRAEEVLKGSLKRQLNENKR
                     YWQELEVAQGDWKNGAMRAFQNFTADADNAVGTAEQMFTVAFSSAGNALATFCTTGKL
                     NFKSFTSSLLSDMARIMAQMAMMQAVKGVGSLFGFTTNADGGVYQSADLSRYSGTVVN
                     RPTFFAFAKGAGVMGEAGPEAILPLRRGADGKLGVVADTGGSGMVMFAPQYNIGINND
                     GTNGQIGPAALKVVYDLGKKAAADFMQQQARDGGRLSGAYR"
     gene            5674..6003
                     /locus_tag="JN001_003016"
     CDS             5674..6003
                     /locus_tag="JN001_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054177.1"
                     /translation="METFRWKVRPDMNVVSEPKVVAVKLGDGYEQRRPAGLNNLLSTY
                     SVTIRVRKGEHPPLKAFLERHGGVRAFQWTPPYDWKPIRVACRKWSASVGALWVTVTA
                     DFEQVVN"
     gene            6003..6702
                     /locus_tag="JN001_003017"
                     /pseudo
     CDS             6003..6702
                     /locus_tag="JN001_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706643.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor tail protein L"
     gene            6707..7450
                     /locus_tag="JN001_003018"
     CDS             6707..7450
                     /locus_tag="JN001_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054178.1"
                     /translation="MTQTESAILAHARRCAPAESCGFVVRTPEGERYIPCVNISAEPE
                     AYFRIAPEDWLRAEMQGEIVALVHSHPGGLPWLSEADRRLQVQSDLPWWLVCRGAIHK
                     FRCVPHLTGRRFEHGVTDCYTLFRDAYHLAGIEMPDFHRGDDWWRHGQNLYLDNLEAT
                     GLYQVPLSSAQPGDVLLCCFGSSVPNHAAIYCGDGELLHHIPEQLSKRERYTDKWQRR
                     THSLWRHREWHASAFTGICNDLAAASTFV"
     gene            7387..7989
                     /locus_tag="JN001_003019"
     CDS             7387..7989
                     /locus_tag="JN001_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000090847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail assembly protein"
                     /protein_id="HAY9054179.1"
                     /translation="MARICLYGDLQRFGRRIDLRVKTGAEAIRALATQLPAFRQKLSD
                     GWYQVRIAGRDAGETELSARLNEPLANGAVIHIVPRLVGAKSGGVFQAVLGAAVMAVA
                     IWMPGVGIMASNLLFSLGASMTLGGVAQMLAPKARTPRTQTTDNGKQNTCFSSLDNMV
                     AQGNVLPVLYGEMRVGSRVVSQEISTADEGDGGQVVVIGR"
     gene            8050..11529
                     /locus_tag="JN001_003020"
     CDS             8050..11529
                     /locus_tag="JN001_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="host specificity protein J"
                     /protein_id="HAY9054180.1"
                     /translation="MGKGSSKGHTPREAKDNLKSTQLLSVIDAISEGPVDGPVDGLKS
                     VLLNGTPVLDSEGKTNFSGVTVVFRAGEQEQTPPEGVESSGSETVLGTEVKYDTPITR
                     TITSANIDRLRLTFGVQALVENTSKGDRNPSEVRLLVQIQRNGGWVTEKDITIKGKTT
                     SQYLASVVVGNLPPRPFNIRMRRMTPDSTTDQLQNKTLWSSYTEIIDVKQCYPNTALV
                     GVQVDSEQFGNQQVSRNYHLRGRILQVPSNYNPQTRQYSGIWDGTLKPAYSNNMAWCR
                     WDMLTHPRYGMGKRLGAADVDKWALYVIGQYCDQSVPDGFGGTEPRITCNAYLTTQRK
                     AWDVLSDFCSAMRCMPVWNGQTLTFVQDRPSDKVWTYNRSNVVMPDDGAPFRYSFSAL
                     KDRHNVVEVNWIDPDNGHETATELVEDAQAILRYGRNVTKMDAFGCTSRGQAHRAGLW
                     LIKTELLETQTVDFSVGAEGLRHVPGDVIEICDDDYAGISTGGRVLAVNSQTRTLTLD
                     REITLPSSCTTLISLVDGNGNPVSVEVQSVTDGVKVKVSRVPDGVAEYSVWGLKLPTL
                     RQRLFRCVSIRENDDGTYAITAVQHVPEKEAIVDNGAHFDGDRRGTVNGVTPPAVQHL
                     TAEVTADSGEYQVLARWDTPKVVKGVSFLLRLTVAADDGSERLVSTARTTETTYRFRQ
                     LALGNYSLTVRAVNARGQQGDPASVSFRIAAPAAPVTIELIPGYFQITAVPKLAVYDP
                     TVQFEFWFSEKRIADIRQVETSARYLGTALYWIAASINIRPGHDYYFYVRSVNTVGKS
                     AFVEAVGRASDDAEGYLSFYKGLINNTHLGKELWTQIDNGQLAPDLTEIRTSITNVSN
                     EITQTVNKKLENQSAAIQQIQKVQVDTNNNLNSMWAVKLQQMKDGRLYIAGIGAGIEN
                     TPAGMQSQVLLAADRIAMINPANGNTKPMFVGQGDQIFMNDVFLKRLTAPTITSGGNP
                     PAFSLTPGGRLTAKNADISGNVNANSGTLNNVTINKNCRVLGKLSANQIEGDLVKTVG
                     KPFPRDSRAPERWPSGTITVRVYDDQPFDRQIVIPAVAFRGAKHERKNNNIYSSCSLI
                     VKKNGAEIYNRTTLDNTLIYTGVIDMPAGHGHMTLEFSVSAWLVNGWYPTASISDLLV
                     VVMKKATAGITIS"
     gene            11597..12196
                     /locus_tag="JN001_003021"
     CDS             11597..12196
                     /locus_tag="JN001_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ail/Lom family outer membrane beta-barrel
                     protein"
                     /protein_id="HAY9054181.1"
                     /translation="MRKVCAAILSAAICLAVSGAPAWASEHQSTLSAGYLQPHTDMPG
                     SDDLKGINVKYRYEFTDTLGLVTSFSYANAEDEQKTHYSDTRWHEDSVRNRWFSVMAG
                     PSVRVNEWFSAYAMAGVAYSRVSTFSGDYLRVTDNKGKTHDVLTGSDDNRHSNTSLAW
                     GAGVQFNPTESVAIDLAYEGSGSGDWRTDGFIVGVGYKF"
     gene            12260..>12730
                     /locus_tag="JN001_003022"
     CDS             12260..>12730
                     /locus_tag="JN001_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004981847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054182.1"
                     /translation="MAVKISGVLKDGAGKPVVNCAIELRARRTSPTVVAHVVATCVTD
                     NNGAYVIEAEPGYYEVALHCNGWQPTRVGDIDVAPTDAPGTLNAFLNAPKDGDLRPEV
                     MKRFEEMVVQAQQSAGAAAGNAQQTAQDVAAAATARDDAQRFAENARQDATVTAE"
BASE COUNT         2973 a         3009 c         4097 g         2651 t
ORIGIN      
        1 attttacagc tgtgtcgcaa tgattcgctg atgattggcc gggagtcttt cagcgtggat
       61 cgtattactc ctgatgacgg cggatgtagt tatatccggt tgcggcgtga aggagcagga
      121 aacgtaaggg cagggggata ttatgagggg gcttgagaat gccatccgca atctgaacag
      181 tcttgatacc cgtatggtgc cgcaggccag cgcatgggca gtaaaccggg ttgctgcaaa
      241 agttgtctcg gttgccaccc ggcaggtcgc caggaatacc gttgcgggag ataaccaggt
      301 gaaggggggc cccctgaaac tggtgcgtca gcgcgtccgg gtatttaaag ccagtccggc
      361 aggaaaaatg tatgcccgta tccgtgttaa ccggggcaat ctgcccgcca ttaagcttgg
      421 cacaacatgc cggcgtgccg gtgacggact gaaggtgggg aaatactttt ttcgtggtgc
      481 gtttatccag cagctggcga acggtcgctg gcatgttctc aggcgtcttc ctgaagcgtg
      541 ttttgaaaca ggaaaggaca gtaaggggcg gcccagaaaa aatcgtctgc ccgtggaggt
      601 tgtgaaaatt ccgctggccg gaccgctgac acaggcattt gaggatgccc gcgatcgcat
      661 cattgccgcg gaaatgccga aacagctggg gtatgccctg aaacagcaac tgaggataca
      721 tttgggatga acaggcacac acaaatccgc caggcagtac tggcaagcct gaagggcgaa
      781 tgcgggggga atgtcgtgct ttttgacggg cttccggcat ttattgatgc gcaggaactg
      841 cccgccgtgg cggtgtggct gagtgatgcg cagtacaccg gaaaaatgac ggatgaggac
      901 gactggcagg ctgttctgca tattgccgtt ttcgtccgtg cacaggcgcc ggattctgag
      961 ctggatacgt ggatggagaa caccatattt ccggccatga aggatattcc ggtgctttcc
     1021 ggactcatcg acaccatgat cccactcggt tttaactatc aacgtgataa tgagatggcc
     1081 acctgggcga tggcggaaat cacgtaccag atcacgtaca cgaattaagg aggtggcaat
     1141 gaccacacca aatccactgg caaagacgaa aggtgcggga acgacgttct ggatgtacac
     1201 cggcaagggc gatgcgtttg cgaacccttt gtcggacact gactggctgc gtcttgcgat
     1261 ggtgaaggat ctgcaacctg gcgaaatgac cgctgatgca gaagatgaca cttatctcga
     1321 tgatgaagat gcagactgga aaacgacaac ccaggggcag aaatccgtcg gtgatacttt
     1381 ggcgacgctg gcctggcgtc cgggtgacag cgggcagaaa aaactggttc agttgttcga
     1441 ttccggtgaa gtctgcgcgt ttcgtatcaa ataccccaac ggtacggttg atgttttccg
     1501 tggctggctg agttcactgg gtaaaaccat tacctcaaaa gaggtgatga cccgtactgt
     1561 aaaaatcagc ggtgtggggc gtccgtatct ggcagaggag ggcgctgaaa ccgtgggtgt
     1621 taccggactg acggtggcac cggcatctgt cagtgtcaaa gcgggagcaa ccaccacact
     1681 gacctttaca gtaaaacctg acggggccag tgacaaagcg atcagtgtgc attcgtcaga
     1741 tcctcagact gcttcggtga ccctgagcgg gcttgtggcc acggtgaaag gcgtgaagca
     1801 gggcagtgtc agcatcgtgg gcatgacctc tgacggagag tttgtggcag tggctgcggt
     1861 gaccgtcagc gcaccataac aggacgatac tcatcattgc cccggttatc cggggctttt
     1921 tgcatccgga gaacatgatg tttctgaaac aggatacgtt taattatgaa aaacagtccg
     1981 tggtgctcag tgagctgtcc gggctgcaga gaattgaata tctgacgttt gttcagcagc
     2041 gaacggcaaa gtttgatgca caggagggag aactgccgga ggctgaacga cagattgctt
     2101 ttctgcgtat gggaatggat atcaatgcct ggctggtttc ccgctcactg tggaatgctg
     2161 agcagtctca ggatgttgag acgctttgcg catccattat gacaacatgg tcgtatgatg
     2221 cgctgggcgc gggggcggag agggttctgt cgctgagcgg tatggggacc attgagaatg
     2281 ccggggatga tgatcatgag gcgctgacgc cggaaaagtc ctgacgcggg aaatgcagtt
     2341 tgtcatgcgg cttgcccggg agttccggcg ggcagactgg cggcggatgc tgtcggaaat
     2401 gtcggccact gagcttggtg agggggcgat tatttccgga tgcagagctt cagtgatgtg
     2461 tggatggatg cgcagtttgc ctcgctgaag gcattgatcg tgagaatggt gtccggcagc
     2521 agtgatgctg cggtggctga tttcagcctt ttaccggaag agaacgggat accggagcga
     2581 acggacgaag aactgatgca tcttggggaa ggtatttccg gaggtgtgcg ttatggacca
     2641 gatagccaac ctggtcattg atttggggat tgatgcggca gagtttaaaa atgaaattcc
     2701 ccgtatcaaa aaccttctga atggtgcagc cggtgatgca gaacggtctt ctgcccgtat
     2761 gcagcgtttt atggagcgtc agactcaggc ggcccggcag acaatgcatg cggcttcttc
     2821 ggctgcaaca gcagcatcag cccatgcgca gacggtggag aagaatgcac gggctcatga
     2881 acgcatggcc cgtgaggtgg aacaaacccg tctgcgcgtg gatgccctga atcagaaaat
     2941 gcgcgaggaa caggcgcagg ccagggcact ggcggaggcg caggataaag cggctgccgc
     3001 cttttatcgc cagattgaca gtgtgaaaca ggccggtgcg gggcttcagg aattacagcg
     3061 tattcagcag cagatccgac aggccagaaa cagtggcggg gttggtcagc aggattatct
     3121 ggcgctgatt tcggagatca cggcgaaaac ccgtgccctg acgcaggcag aggaacaggc
     3181 cacccggcag aaagcggcgt ttatccgcca gcttaaagag caggcaaccc gccagaatct
     3241 gtcgtcttct gagttgcttc gcgccagggc ggctcagctg ggggtaagca gtgctgcaga
     3301 agtgtatatc cgcaaaatgg agcgggcagg aaaagccaca cattcgctgg ggctgaaaag
     3361 tgcggcagcc cggcgggagc tgggggtgtt aatcagtcag atggcgcgcg gcaattttgg
     3421 tgcgctgagg ggatccggga taacgctggc taaccgtgcc ggatggacag gcgcactgat
     3481 gtcgccgaaa ggcatgatga ctggcggcgt tattggcgga cttgtcgcgg cggtcctggg
     3541 tctgggtaaa gcctggcatg acggccggaa ggagggcgag gaatttaacc gtcagctggc
     3601 gctgacggga cattatgccg gtgtcactgt cgggcagttg tggaaactca gccgggccat
     3661 atccgggaat ggtatcacgc aacatgcggc agccggtgcg ctggcacagg tggtgggcag
     3721 tggggcattt catggaaacg atattggtat ggtggcgaaa gctgccgcac agatggagcg
     3781 atcggttggc cagtcggtca gcgataccat aaatcagttt aagcggctga aggatgatcc
     3841 tgtaaatgcc gcgaaggcgc tggacaatgc gctgcatttt ttgactgcca ctcagcttga
     3901 gcagatacgc gtccttgggg agcaggggcg gtccagtgat gcggcccgga tcgccatgtc
     3961 tgcgctggca gaggaaaccg gtaaacgcac atctgatatt gataataatc tcaatgcgct
     4021 gggtagtacg ctgcaaacct tgtctgactg gtggaagcag ttctgggatg cggccatgaa
     4081 tattggtcgt gaagactcgc tggatgcgca gattgatgcg ttacaggaaa aaattcagcg
     4141 cgcgaaaaaa tatccgtgga caaacgcctc cacacaggtg gagtacgatc agcagcgtct
     4201 taacgatctt caggagaaaa aacgccggaa ggatttgcag gatgcaaaag cgcaggcaga
     4261 acggaattac caggagcaac agaaacgccg gaatgctgaa aatgccgcgc tgaaccggat
     4321 gaatgaaacg gaagctgcac gacatcagcg ggaaattgcg cgtattaatg ccatgcagta
     4381 cgccgaccag gctgtcaggg atgcggcgat acagcgtgaa aatgaacgtt acgaaaaagc
     4441 cattaagaaa aatacacggg caacccgtaa tgatgaggcc acccggttat tgctgcagta
     4501 cagtcagcag caggcacagg tggaagggca gattgctgct gccagacagt cagcaggcat
     4561 tgccactgaa aggatgactg aagcgcataa acagcttctg gccctgcagc agcgcatcag
     4621 cgacctggac gggaaaaagc tgacggcaga tgaaaagagt gtgctggccc gtaagaatga
     4681 gctgattcag gcgctgacgc tgctggatgt gaaacagcag gagctgcaga aacagacagc
     4741 gcttaacgac ctgagaaaaa aaacggttca gctgaccagc cagctggcag acaaagaacg
     4801 tgcactgcgt gagcagcaca atctggatat tgccactgca ggtatggggg ataagcagcg
     4861 gcagcgctac caggcacagt tgcgcatccg gcaggaatac cggcaacagt tgcaacagct
     4921 tgagaatgac agtcgccaga aaggcactta cgggacggag gactaccgga gggctgagga
     4981 ggtgctgaag gggagcctga agcgacaact gaatgaaaac aaacgctact ggcaggaact
     5041 ggaagtggcg cagggcgact ggaaaaacgg tgccatgcgg gcgtttcaga attttacggc
     5101 ggatgcggat aatgcggtgg gaacggcaga acagatgttt acagtggcat tcagcagtgc
     5161 cggtaatgca ctggcgacat tctgtaccac cggtaagctg aattttaaat ccttcacctc
     5221 ttccctgttg tcagatatgg ccagaattat ggcacagatg gccatgatgc aggcggtaaa
     5281 gggcgtcggc tctttattcg gcttcacgac taatgctgat ggcggtgttt accagtctgc
     5341 tgatttgagt cgctacagtg gcacggtggt taaccgtccg acgttttttg cttttgcaaa
     5401 aggcgcgggt gtgatggggg aagcgggacc tgaagccatt ctgccactgc gtcgcggtgc
     5461 tgatggtaag ctgggggttg tggcggatac tggtggttca ggcatggtga tgtttgcccc
     5521 gcagtacaac atcgggatca ataacgacgg cacgaacggg cagataggtc cggcagcact
     5581 gaaggtggtt tatgacctcg ggaaaaaagc ggccgcggac tttatgcaac agcaggcccg
     5641 tgatggtggc cggttaagtg gagcataccg gtaatggaga cgtttcgctg gaaggtgcgc
     5701 ccggatatga atgtggtatc agagccaaaa gtggtggcag tgaagctggg tgatggttat
     5761 gaacagcgtc gcccggcggg actgaataat ctgctgtcga cttacagcgt gacgatacgt
     5821 gttcgtaaag gtgaacaccc acctttaaaa gcctttctgg aacggcacgg tggcgtccgc
     5881 gcatttcagt ggacgccacc ttatgactgg aaaccgatca gggtggcttg tcgtaaatgg
     5941 tcggcaagcg tgggggcgtt atgggtgact gtaacggccg attttgaaca ggtggtgaac
     6001 tgatgcagga tatccggcag gaaacactga atgaatgcac ccgtgcggag cagtcggcca
     6061 gcgtggtgct ctgggaaatc gacctgacag aggtcggtgg agaacgttat tttttctgta
     6121 atgagcagaa cgaaaaaggt gagccggtca cctggcaggg gcgacagtat cagccgtatc
     6181 ccattcaggg ggagtggttt tgaactgaat ggcaaaggca ccagtacgcg ccccacgctg
     6241 acggtttcta acctgtacgg tatggtcgcc gggatggcgg aagatctgca gagtctggtc
     6301 ggcggaacgg tggtccggcg taaggtttac gcccgttttc tggatgcggt gaacttcgtc
     6361 aacggaaaca gtgacgccga tccggagcag gaggtgatca gccgctggcg catcgagcag
     6421 tgcagcgaac tgagcgcggt cagtgcctct tttgtgctgg ccacaccaac ggagacggat
     6481 ggcgcggttt tcccggggcg tatcatgctg gcgaatacct gtatgtggac ctaccgttct
     6541 gatgagtgtg gttacacggg cagggcagtg gctgacgagt tcgacaaacc aacgacggat
     6601 atccggaagg acaaatgcag caagtgtatg cgcgggtgtg agttgcgcaa caataccggt
     6661 aatttcggcg gtttcctttc catcaataaa ctttctcagt aaatccatga cacagacaga
     6721 atcagcgatt ctggcgcacg cccggcgatg tgcgccagcg gagtcgtgtg gcttcgtggt
     6781 gagaacgccg gagggggagc ggtatatccc ttgtgtgaat atttctgcag agccggaggc
     6841 gtattttcgt atcgcaccgg aagactggct gcgggcagag atgcaggggg agattgtggc
     6901 actggtccac agtcatcccg gtggtctgcc ctggctgagt gaggctgacc ggcggctgca
     6961 ggtgcagagt gatttgccgt ggtggctggt ctgccggggg gcgattcaca agttccgctg
     7021 tgtgccgcat ctcaccgggc ggcgctttga gcacggggtg acggactgtt acacgctgtt
     7081 ccgggatgct tatcatctgg cggggattga gatgccggat tttcatcgcg gggatgactg
     7141 gtggcgtcac ggtcagaatc tctatctgga taatctggag gccacagggc tgtatcaggt
     7201 gccgttgtca tcagcacaac cgggcgatgt gctgctgtgc tgttttggtt catcggtgcc
     7261 gaatcatgcc gccatttact gcggcgacgg tgagctgctg caccatattc ctgaacaact
     7321 gagtaaacga gagaggtata ccgacaaatg gcagcgacgc acacactccc tctggcgtca
     7381 ccgggaatgg cacgcatctg cctttacggg gatttgcaac gatttggccg ccgcatcgac
     7441 cttcgtgtga aaacgggggc tgaagccatc cgcgcactgg ccacacagct cccggcgttt
     7501 cgtcagaaac tgagtgacgg ctggtatcag gtgcgcattg ccgggcgtga tgcaggtgaa
     7561 accgaattgt ctgcccgtct taatgagccg ctggcaaatg gtgcagtgat ccacatagta
     7621 ccgcgtctgg tgggagctaa aagtggcggt gtgtttcagg cggtgctggg ggcagctgtt
     7681 atggcggttg ctatatggat gccgggggta ggaattatgg cgagtaatct gctgttttct
     7741 ctcggtgcca gtatgacgct tggcggtgtt gcacagatgc tggcaccgaa agccagaact
     7801 ccccgtacac agacaacgga taacggcaaa cagaacacct gtttctcctc actggataac
     7861 atggttgccc agggcaatgt tctgcctgtt ctgtacggtg aaatgcgcgt ggggtcgcgg
     7921 gtggtatctc aggagatcag cacggcagac gaaggggatg gtggtcaggt tgtggtgatt
     7981 ggtcgctgat gcaaaatgtt tcatgtgaaa ccgcctgcgg gcggttttgt cgtttatgga
     8041 gcgtgaggaa tgggtaaagg cagcagtaag gggcataccc cgcgcgaagc gaaggacaac
     8101 ctgaaatcca cgcagttgct gagtgtgatt gatgccatca gcgaagggcc ggttgacggt
     8161 ccggtggatg gattaaaaag cgtgctgctg aacggtacgc cagtcctgga cagcgagggg
     8221 aagacaaact tttccggtgt tacggtggtg ttccgcgccg gcgagcagga gcagacaccg
     8281 ccggaggggg ttgaatcttc cggctcagag actgtgctgg gtacggaagt gaaatacgac
     8341 acgccgatca cccggaccat cacgtcggca aacattgatc gtctgcgcct gaccttcggt
     8401 gtgcaggcac tggtggaaaa cacctcaaag ggggaccgga atccgtcgga agtccgcctg
     8461 ctggttcaga tacagcgtaa cggtggctgg gtgacggaaa aagacatcac cattaagggc
     8521 aaaaccactt cgcagtatct ggcctcggtg gtggtgggta acctgccgcc gcgcccgttt
     8581 aatatccgga tgcgcaggat gacaccggac agcaccacag accagctgca gaacaaaacg
     8641 ctctggtcgt cgtacaccga aatcatcgat gtgaaacagt gctacccgaa cacggcgctg
     8701 gtcggcgtgc aggtggattc agagcagttc ggtaaccagc aggtgagtcg caattatcat
     8761 cttcgcgggc gcattctgca ggtgccgtcg aactataacc cgcagacgcg gcaatacagc
     8821 ggtatctggg acggaacgct taagccagca tacagcaaca acatggcctg gtgtcggtgg
     8881 gacatgctca ctcatccgcg ctacggcatg gggaaacgtc ttggtgcggc agatgtggac
     8941 aaatgggcgc tgtatgtcat cggccagtac tgcgaccagt cagtgccgga cggatttggc
     9001 ggcacggagc cgcgcatcac ctgtaacgct tacctgacca cacagcgtaa ggcgtgggat
     9061 gttctcagtg atttctgctc ggcgatgcgc tgtatgccgg tatggaacgg gcagacgctg
     9121 acgttcgtgc aggaccgacc gtcggataaa gtgtggacct ataaccgcag taatgtggtg
     9181 atgccggatg atggcgcgcc gttccgctac agcttcagcg ccctgaagga ccgccataat
     9241 gtcgttgagg tgaactggat tgatccggac aacggtcatg agacggcgac agagcttgtg
     9301 gaggacgcgc aggccattct ccgttacggt cgtaacgtca cgaagatgga tgcctttggc
     9361 tgtaccagcc ggggacaggc gcaccgcgcc gggctgtggc tgattaaaac ggaactgctg
     9421 gaaacgcaga ccgtggactt cagcgtcggc gcagaagggc ttcgccatgt accgggtgat
     9481 gtcattgaaa tctgcgatga tgattatgcc ggtatcagca ccggtggtcg cgtactggcg
     9541 gtgaacagcc agacccggac gctgacgctc gaccgtgaaa tcacgctgcc gtcctcctgt
     9601 accacgctga taagcctggt tgacggaaat ggcaatccgg tcagcgtgga ggttcagtcc
     9661 gtcaccgacg gcgtgaaggt gaaagtgagc cgggttcctg acggcgttgc agaatacagc
     9721 gtgtgggggc tgaagctgcc gacgctgcgc cagcgcctgt tccgctgcgt gagtatccgt
     9781 gagaacgacg acggcacgta tgccatcacc gccgtgcagc atgtgccgga aaaagaggcc
     9841 atcgtggata acggggcaca ctttgacggt gaccggcgcg gcacggtgaa tggtgtcacg
     9901 ccgccagcgg tgcagcatct gaccgccgaa gtcaccgcag acagcgggga atatcaggtg
     9961 ctggcgcgat gggacacgcc gaaggtggtg aagggtgtga gcttcctgct tcgcctgacc
    10021 gtggcagcgg acgacggcag tgagcggctg gtcagcacag ccaggacgac ggaaaccaca
    10081 taccgcttca ggcagctggc gctggggaat tacagtctga cagtccgggc ggtaaatgcc
    10141 cgggggcagc agggcgatcc ggcgtcggta tcgttccgga ttgcggcacc ggcagcgcct
    10201 gtcactattg aactgatacc ggggtatttt cagataacgg cggtcccgaa actggctgta
    10261 tacgacccga cggtgcagtt tgagttctgg ttttcggaaa agcggattgc ggatatcagg
    10321 caggttgaaa ccagcgcccg ctatcttggc acggcgctgt actggatagc cgccagtatc
    10381 aatatcaggc cgggccatga ttattatttt tacgttcgca gtgtgaacac cgttggcaaa
    10441 tcggcatttg tggaggccgt cggtcgggcg agcgatgatg cggaaggtta tctgagtttt
    10501 tataaagggt tgatcaataa cacgcatctc ggcaaggagt tgtggacgca gattgataac
    10561 ggtcagcttg cgccggacct gactgaaatc aggacgtcca ttacgaatgt cagcaatgaa
    10621 atcacgcaaa ccgtcaataa aaaactggaa aatcagagtg ctgcaatcca gcagatacag
    10681 aaagttcagg ttgatacaaa taataacctg aacagcatgt gggctgtgaa gctgcaacag
    10741 atgaaggacg gacgccttta tattgcgggt atcggtgccg gtattgagaa tacgccagca
    10801 ggaatgcaga gtcaggtgct gctggcggca gacaggattg cgatgattaa tcctgcgaat
    10861 ggcaacacaa agccgatgtt tgttggtcag ggcgatcaga tattcatgaa cgacgtgttc
    10921 ctgaaacgcc tgacggctcc gaccattacc agcggcggta atcctccggc attttccctg
    10981 acacctggcg gacggctgac ggcgaaaaat gccgatatca gcggtaacgt gaacgcgaac
    11041 tccgggacgc tcaacaacgt cacgattaat aagaactgtc gggttctggg aaaattgtcc
    11101 gcgaaccaga ttgaaggcga tctcgttaaa acagtgggca aacctttccc acgggactcc
    11161 cgggcaccgg agaggtggcc atcagggacc attaccgtca gggtttatga cgatcagccg
    11221 tttgatcggc aaattgttat tcccgcggtg gcgtttcgcg gtgctaaaca tgagcggaag
    11281 aataacaata tttattcgtc atgcagcctg atagtgaaga aaaacggtgc tgaaatttat
    11341 aaccgaacga ccctggataa tacgctgata tatacgggtg ttattgatat gcctgccggt
    11401 cacggtcaca tgacgctgga gttttctgta tcggcatggc tggtaaatgg ctggtatccc
    11461 acagcaagta tcagcgattt gctggttgtt gtgatgaaga aagccactgc aggcatcacg
    11521 attagctgaa ttttataacc cagatacggg caccagaaat ggtgcctttt ttattgcaga
    11581 aaagcgagag gtaattatgc gtaaagtttg tgcagccatt ttgtccgcag ccatctgtct
    11641 ggctgtatcc ggtgcgcctg catgggcgtc tgaacatcag tccacgctga gcgccgggta
    11701 tcttcagccc catactgata tgccaggcag cgatgacctg aagggcatta acgtgaaata
    11761 ccgttatgag tttacggaca cgttggggct ggtgacgtca ttcagctatg ccaacgctga
    11821 agatgagcaa aaaacgcatt acagcgatac ccgctggcat gaggattccg tgcgtaaccg
    11881 ctggttcagc gtgatggcgg ggccgtctgt gcgcgtgaat gaatggttca gcgcgtatgc
    11941 gatggcgggc gtggcttaca gccgtgtgtc gaccttctcc ggggattatc tccgcgtaac
    12001 tgacaacaag gggaaaacgc acgatgtgct gaccgggagt gatgacaacc gccacagcaa
    12061 cacgtctctg gcgtgggggg ctggcgtgca gtttaacccg accgaatccg tggccattga
    12121 ccttgcttat gaaggttccg gcagtggcga ctggcgcact gacggtttca tcgtgggtgt
    12181 cggttataag ttctgattag ccaggtaaca cagtgttatg acagcccgct ggttcaggcg
    12241 ggctttttgt ggggtgaata tggcagtaaa gatttcaggt gtactgaaag atggggcggg
    12301 taaacctgtc gtaaattgtg cgattgaact gcgggccaga agaaccagtc cgaccgttgt
    12361 ggcacacgtt gttgccactt gcgtgacgga caataacggt gcttatgtga ttgaggctga
    12421 gccggggtat tacgaggttg cgcttcactg taacggctgg cagccaaccc gtgtcgggga
    12481 tattgatgtg gcaccgactg atgcaccggg gacactgaac gcgtttctga atgcaccaaa
    12541 ggatggtgat ttacgtccgg aggtgatgaa gcgctttgag gaaatggtgg tgcaggcgca
    12601 gcagagcgcc ggggccgcag ccggaaacgc acagcagacg gcgcaggatg tggcggcagc
    12661 cgcaacggcc cgtgatgatg cacaacgttt tgcggagaat gccagacagg atgcaaccgt
    12721 cacagctgag
//
LOCUS       DADMJE010000123        12658 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.124, whole genome shotgun sequence.
ACCESSION   DADMJE010000123 DADMJE010000000
VERSION     DADMJE010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12658
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.124"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(4..324)
                     /gene="chbB"
                     /locus_tag="JN001_003023"
     CDS             complement(4..324)
                     /gene="chbB"
                     /locus_tag="JN001_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIB"
                     /protein_id="HAY9054183.1"
                     /translation="MEKKHIYLFCSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLA
                     GEKGQNADVVLLGPQIAYMLPEIQRLLPNKPVEVIDSLLYGKVDGLGVLKAAVAAIKK
                     AAAN"
     gene            complement(622..960)
                     /gene="osmE"
                     /locus_tag="JN001_003024"
     CDS             complement(622..960)
                     /gene="osmE"
                     /locus_tag="JN001_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmotically-inducible lipoprotein OsmE"
                     /protein_id="HAY9054184.1"
                     /translation="MNKNMAGILSAAAVLTMLAGCTAYDRTKDQFVQPVVKDVKKGMS
                     RAQVAQIAGKPSSEVSMIHARGTCQTYILGQRDGKAETYFVALDDTGHVINSGYQTCA
                     EYDTDPQAAK"
     gene            1162..1989
                     /gene="nadE"
                     /locus_tag="JN001_003025"
     CDS             1162..1989
                     /gene="nadE"
                     /locus_tag="JN001_003025"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HAY9054185.1"
                     /translation="MTLQQQIIKALGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLV
                     LGISGGQDSTLAGKLCQMAINELRQETGNESLQFIAVRLPYGVQADEQDCQDAIAFIQ
                     PDRVLTVNIKGAVLASEQALREAGIELSDFVRGNEKARERMKAQYSIAGMTSGVVVGT
                     DHAAEAITGFFTKYGDGGTDINPLYRLNKRQGKQLLAALACPEHLYKKAPTADLEDDR
                     PSLPDEVALGVTYDNIDDYLEGKNVPQQVARTIENWYLKTEHKRRPPITVFDDFWKK"
     gene            2219..3106
                     /gene="cho"
                     /locus_tag="JN001_003026"
     CDS             2219..3106
                     /gene="cho"
                     /locus_tag="JN001_003026"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease Cho"
                     /protein_id="HAY9054186.1"
                     /translation="MVRRLTSPRLEFEAAAIYEYPEHLRSFLNDLPTRPGVYLFHGES
                     DTMPLYIGKSVNIRSRVLSHLRTPDEAAMLRQSRRISWICTAGEIGALLLEARLIKEQ
                     QPLFNKRLRRNRQLCALQLNEKRVDVVYAKEVDFSRAPNLFGLFANRRAALQALQTIA
                     DEQKLCYGLLGLEPLSRGRACFRSALKRCAGACCGKESHEEHALRLRQSLERLRVVCW
                     PWQGAVALKEQHPEMTQYHIIQNWLWLGAVNSLEDATTLIRTPAGFDHDGYKILCKPL
                     LSGNYEITELDPANDQRAS"
     gene            complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JN001_003027"
     CDS             complement(3066..3641)
                     /gene="ves"
                     /locus_tag="JN001_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416256.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="environmental stress-induced protein Ves"
                     /protein_id="HAY9054187.1"
                     /translation="MEYFDMRKMSVNLWRNAAGETREICTFPPAKRDFYWRASIASIA
                     ANGEFSLFPGMERIVTLLEGGEMLLESADRFNHTLKPLQPFAFAADQVVKAKLTEGQM
                     SMDFNIMTRLDVCKAKVRIAERTFTTFGSRGGVVFVINGAWQLGDKLLTTDQGACWFD
                     GRHTLRLLQPQGKLLFSEINWLAGHSPDQVQ"
     gene            complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JN001_003028"
     CDS             complement(3844..4314)
                     /gene="spy"
                     /locus_tag="JN001_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-independent periplasmic protein-refolding
                     chaperone"
                     /protein_id="HAY9054188.1"
                     /translation="MRKLTALFVASTLALGAANLAHAAAPADAKPMMHHKGKFGPHQD
                     MMFKDLNLTDAQKQQIREIMKGQRDQMKRPPLEERRAMHDIIVSDTFDKAKAEAQIAK
                     MEEQRKANMLAHMETQNKIYNILTPEQKKQFNANFEKRLTERPAAKGKMPATAE"
     gene            complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JN001_003029"
     CDS             complement(4644..5612)
                     /gene="astE"
                     /locus_tag="JN001_003029"
                     /EC_number="3.5.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate desuccinylase"
                     /protein_id="HAY9054189.1"
                     /translation="MDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLTPPQG
                     ALVISAGIHGDETAPVEMLDALLGAISHGEIPLRWRLLVILGNPPALKQGKRYCHSDM
                     NRMFGGRWQLFAESGETCRARELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV
                     LPQRDIPWDEKFLTWLGAAGLEALVFHQEPGGTFTHFSARHFGALACTLELGKALPFG
                     QNDLRQFAVTASAIAALLSGESVGIVRTPPLRYRVVSQITRHSPSFEMHMASDTLNFM
                     PFEKGTLLAQDGEERFTVTHDVEYVLFPNPLVALGLRAGLMLEKIS"
     gene            complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JN001_003030"
     CDS             complement(5605..6948)
                     /gene="astB"
                     /locus_tag="JN001_003030"
                     /EC_number="3.5.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-succinylarginine dihydrolase"
                     /protein_id="HAY9054190.1"
                     /translation="MNAWEVNFDGLVGLTHHYAGLSFGNEASTRHRFQVSNPRLAAKQ
                     GLLKMKTLADAGFPQAVIPPHERPFIPVLRQLGFSGSDEQVLEKVARQAPHWLSSVSS
                     ASPMWVANAATIAPSADTLDGKVHLTVANLNNKFHRSLEAPVTESLLKAIFNDEEKFS
                     VHSALPQVALLGDEGAANHNRLGGHYGEPGMQLFVYGREEGNDTRPSRYPARQTREAS
                     EAVARLNQVNPQQVIFAQQNPDVIDQGVFHNDVIAVSNRQVLFCHQQAFARQSQLLAN
                     LRARVNGFMAIEVPATQVSVSDAVSTYLFNSQLLSRDDGSMMLVLPQECREHAGVWGY
                     LNELLAADNPISELKVFDLRESMANGGGPACLRLRVVLTEEERRAVNPAVMMNDTLFN
                     ALNDWVDRYYRDRLTAADLADPQLLREGREALDVLSQLLNLGSVYPFQREGGGNG"
     gene            complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JN001_003031"
     CDS             complement(6945..8423)
                     /gene="astD"
                     /locus_tag="JN001_003031"
                     /EC_number="1.2.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylglutamate-semialdehyde dehydrogenase"
                     /protein_id="HAY9054191.1"
                     /translation="MTLWINGDWITGQGASRVKRNPVSGEVLWQGNDADAAQVEQACR
                     AARAAFPRWARLSLAERQVVVERFAGLLESNKAELTAIIARETGKLRWEAATEVTAMI
                     NKIAISIKAYHVRTGEQRSEMPDGAASLRHRPHGVLAVFGPYNFPGHLPNGHIVPALL
                     AGNTIIFKPSELTPWSGEAVMRLWQQAGLPPGVLNLVQGGRETGQALSALEDLDGLLF
                     TGRANTGYQLHRQLSGQPEKILALEMGGNNPLIIDEVADIDAAVHLTIQSAFVTAGQR
                     CTCARRLLLKSGAQGDAFLARLVAVSQRLTPGNWDDEPQPFIGGLISEQAAQQVVTAW
                     QQLEAMGGRTLLAPRLLQLETSLLTPGIIEMTGVAGVPDEEVFGPLLRVWRYDSFEEA
                     ILMANNTRFGLSCGLVSPEREKFDQLLLEARAGIVNWNKPLTGAASTAPFGGIGASGN
                     HRPSAWYAADYCAWPMASLESDSLTLPATLNPGLDFSDEVVR"
     gene            complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JN001_003032"
     CDS             complement(8420..9454)
                     /gene="astA"
                     /locus_tag="JN001_003032"
                     /EC_number="2.3.1.109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine N-succinyltransferase"
                     /protein_id="HAY9054192.1"
                     /translation="MMVIRPVERSDVSALMQLASKTGGGLTSLPANEATLSARIERAI
                     KTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAVGLNDPWHNYRVGTLVHASKELN
                     VYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFMFMAAFRDKFNDKVV
                     AEMRGVIDEHGYSPFWQSLGKRFFSMDFSRADFLCGTGQKAFIAELMPKHPIYTHFLS
                     QEAQDVIGQVHPQTAPARAVLEKEGFRYRNYIDIFDGGPTLECDIDRVRAIRKSRLVE
                     VAEGQPAQGDFPACLVANENYHHFRVVLARTDPATERLILTAAQLDALKCHAGDRVRL
                     VRLCAVEKTA"
     gene            complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JN001_003033"
     CDS             complement(9451..10671)
                     /gene="astC"
                     /locus_tag="JN001_003033"
                     /EC_number="2.6.1.11"
                     /EC_number="2.6.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinylornithine/acetylornithine transaminase"
                     /protein_id="HAY9054193.1"
                     /translation="MSQPITRENFDEWMIPVYAPAPFIPVRGEGSRLWDQQGKEYIDF
                     AGGIAVNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATFADRVFFC
                     NSGAEANEAALKLARKFAHDRYGSHKSGIMAFKNAFHGRTLFTVSAGGQPAYSQDFAP
                     LPPDIRHAAYNDINSASALIDDATCAVIVEPIQGEGGVVPASNAFLQGLRELCDRHNA
                     LLIFDEVQTGVGRTGELYAYMHYGVTPDLLTTAKALGGDFPVGALLTTEECASVMTVG
                     THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINHRYGLFSEVRG
                     LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAGGNVVRFAPALNVSEEEVTTGLDR
                     FAAACEHFVSRGSS"
     gene            11117..11923
                     /gene="xthA"
                     /locus_tag="JN001_003034"
     CDS             11117..11923
                     /gene="xthA"
                     /locus_tag="JN001_003034"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HAY9054194.1"
                     /translation="MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDDMFPL
                     EEVAKLGYNVFYHGQKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGN
                     VTVINGYFPQGESRDHPIKFPAKAQFYQNLQNYLETELKRDNPVLIMGDMNISPTDLD
                     IGIGEENRKRWLRTGKCSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSK
                     GFDDNRGLRIDLLLASQPLAECCVETGIDYEIRSMEKPSDHAPVWATFRR"
     gene            12090..>12658
                     /locus_tag="JN001_003035"
     CDS             12090..>12658
                     /locus_tag="JN001_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310483.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY9054195.1"
                     /translation="MNAERKFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSG
                     LFGYSLYILLFIIATLFLLPGSILVIAGGIVFGPLLGTLLSLIAATLASSCSFLLARW
                     LGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGLTTIAFWP
                     YTLISALTTLPGIVIYTVMASDLANEGITL"
BASE COUNT         3076 a         3427 c         3098 g         3057 t
ORIGIN      
        1 aaattaattt gctgcggctt ttttaatcgc tgcaaccgca gccttaagca cgcctaaacc
       61 atcgactttg ccataaagca gcgagtcaat tacttcaacc ggtttgttgg gtaacaaacg
      121 ctggatttcg ggcaacatat aagcaatctg cggccctaat aacacgacat cggcattctg
      181 acctttttca ccagccagtg tttccggaaa tgcttcaata atgaccggaa cttcatattt
      241 ttctgcctgt gcgcgcattt ttgataccag taaagaggta gacatgcccg cagaacaaaa
      301 cagataaatg tgtttctttt ccataaaact gccctcatcg acgattatct gtcagccaga
      361 cactccgcaa gccttaacct gcttccatgc tctgggtaac ttgcgaaacc aacatgactt
      421 tttttgtggc tgaaaggagt atacggtata gacctgagca atagtatttc tttgacctta
      481 taaattgtct ctccttgacc tgcggttatg accctcttca catttcgggc aaataattcg
      541 cgaagataat taagaactca ggccaaaaaa accggcgcaa tggccggttt ccgttgttac
      601 tcaagctttc aaacgaagtg attacttcgc agcctgtgga tcagtgtcgt attcagcaca
      661 ggtctgataa ccggagttga tgacatgtcc ggtatcatct aacgcgacaa agtaggtttc
      721 tgctttacca tcacgttgac ccaggatgta ggtctggcaa gtaccacgag catggatcat
      781 gctcacttca gacgaaggtt tacccgcaat ttgtgcaacc tgcgcccggc tcatgccttt
      841 tttgacgtct ttcaccacag gctgtacaaa ctggtctttg gtacgatcat aagccgtaca
      901 acccgccagc atggttaata ccgccgctgc actcagaatt cctgccatat tcttgttcat
      961 attccgtcct cttgtttatc agcgtgttag ataagcctgg aatacattgg gcgctttttc
     1021 aagcccgtga acgaaacgac tccgctttca gaggattcct gtatgacgtt ttatccacca
     1081 ttcaacccgc tgtcgcttgt cgtttcagta gcgacgggtt agctttaagg aagttttgtc
     1141 ttttctgtct ggaggggttc aatgacattg caacaacaaa taataaaggc gctgggcgca
     1201 aaaccgcaga ttaatgctga agaggaaatt cgtcgtagtg tcgattttct gaaaagctac
     1261 ctgcaaactt atccgttcat taaatcactg gtgctcggga tcagcggcgg tcaggactcc
     1321 acgcttgccg gtaagctgtg ccagatggcg attaatgagc tgcgccagga gaccggcaac
     1381 gaatcactgc aatttattgc cgtacgcctg ccctatggtg ttcaggccga cgaacaagat
     1441 tgccaggatg ccattgcctt tattcaaccg gatcgcgtat taaccgttaa tatcaagggc
     1501 gcggtattgg ccagcgaaca ggcgctgcgc gaagcgggca ttgaactgag cgattttgtc
     1561 cgtggcaatg aaaaagcgcg tgagcggatg aaagcacaat atagcattgc gggtatgacc
     1621 agcggtgtcg tggtgggcac cgatcatgca gcagaagcta ttaccggatt cttcactaaa
     1681 tatggtgacg gcggtacgga cattaatccg ctgtatcgtc tcaacaaacg tcagggtaaa
     1741 cagttactgg cggcattagc ttgcccggaa cacctttata agaaagcgcc aacggccgat
     1801 ctggaagatg atcgcccttc tctgccagat gaagtggcac tcggcgtgac ctatgacaat
     1861 atcgacgact atctggaagg gaaaaacgta cctcaacagg tcgccagaac aatagagaac
     1921 tggtatctga aaaccgaaca taaacgccgt ccgccaatta ccgttttcga tgatttctgg
     1981 aaaaagtaat aatttgcaca tattggattg tgcgaaaaag agtaatttgt tcacgccgga
     2041 tgcggcgtga acgccttatt cgacctataa aactatgcaa attcaataca ttgcaggagt
     2101 cgaataggcc tgacaggcgt agcacgtcag acggtgtaac ctttgtcatc gacccgcctc
     2161 ttttttaatc gcttcccgcc tgttacactg gatagataac cagcattcgg agtcaacagt
     2221 ggtacggcgt ttaacttctc cgcggctcga atttgaagct gcggcaattt atgaatatcc
     2281 cgaacattta cgttcattcc ttaatgactt acccacccga ccaggggtgt atctgtttca
     2341 tggtgaaagt gacaccatgc cgctctatat cggcaaaagc gttaacatcc gcagccgcgt
     2401 cctttctcat ttacgtaccc cggatgaagc cgccatgcta cggcaatccc gacggatcag
     2461 ctggatatgt accgccggtg aaatcggcgc tctgctcctt gaagcgcgat taatcaaaga
     2521 acaacagccg ctgtttaata aacggttgcg ccgcaatcgt cagctctgtg ccctgcaatt
     2581 aaatgaaaag cgcgtcgatg tggtgtatgc caaagaggtg gatttttcac gagcccccaa
     2641 cctgtttggc ctgtttgcca ataggcgcgc agctttgcaa gcattgcaga ccatcgctga
     2701 tgaacaaaaa ctttgttatg gcctgctggg actggaaccg ttaagtcgcg gtcgtgcatg
     2761 ttttcgttca gcgctaaaac gttgcgccgg agcatgctgc ggtaaagaga gccatgagga
     2821 acatgcgcta cgcttgcgcc agtctctgga gcgtttgcgg gtggtgtgtt ggccttggca
     2881 aggggcggtg gcgctgaaag aacagcaccc ggaaatgact caatatcata ttattcaaaa
     2941 ctggctgtgg ctgggggcgg ttaattcgct ggaagacgcg acaacgttaa ttcggacacc
     3001 cgccgggttt gatcacgacg gttataaaat tctttgtaag ccgctgcttt ccggtaacta
     3061 tgaaattact gaacttgatc cggcgaatga ccagcgagcc agttgatttc actgaacaac
     3121 agtttacctt gcggttgtaa aagccgcagg gtgtgcctgc catcgaacca gcacgcgccc
     3181 tggtcggtag tgagcaattt atcgcccagt tgccacgccc cgttaatcac aaacaccacc
     3241 ccgccgcgtg agccaaaggt agtaaacgta cgttcggcaa ttctgacttt cgccttacag
     3301 acatccaggc gtgtcatgat gttgaaatcc atcgacatct gcccttccgt cagtttcgct
     3361 tttaccacct ggtccgctgc aaaggcaaaa ggctgtaacg gttttaaggt atggttaaag
     3421 cggtctgcgc tttcaaggag catctcgccg ccttccagca acgtcactat cctttccatg
     3481 ccgggaaaca aagaaaactc cccattcgcc gcgatggatg caatgctggc acgccagtaa
     3541 aaatcacgtt ttgccggtgg gaaagtgcaa atttcgcgcg tttcaccggc agcatttcgc
     3601 cacagattca ccgacatttt acgcatatca aagtattcca tactcgctcc cggcccgttc
     3661 ttttcattgt tatcgttcag gtaaccgtgg atggttatcg gcaactcggg tgatttacgt
     3721 tagtggtgat caggcttttt ttacaactgt ttgagaagag aaaagaaaac cgccgatcct
     3781 gtccaccgca ttactgcaag gtagtggaca agaccggcgg tcttaagttt tttggctgaa
     3841 agattattca gcagttgcag gcattttacc ttttgccgct ggacgttctg tcagacgctt
     3901 ctcaaaatta gcattaaatt gctttttctg ttccggcgtc aggatgttgt aaattttgtt
     3961 ctgggtttcc atgtgcgcca gcatgttagc tttgcgctgt tcttccattt ttgcgatctg
     4021 cgcttcagct tttgctttat cgaaggtatc gctgacaatg atgtcatgca ttgcgcggcg
     4081 ttcttccagc ggcggacgtt tcatctggtc acgctggcct ttcatgattt cgcggatctg
     4141 ctgtttctgc gcgtcggtca ggttcaggtc tttgaacatc atgtcctgat gcggaccgaa
     4201 cttgcctttg tggtgcatca tcggcttcgc gtcagccggt gctgcggcat gggccaggtt
     4261 agccgcgcca agagccaggg tagaggcaac aaacagtgca gttaatttac gcatattcta
     4321 tatccttcct ttcagttatt tattacggct ttcttaagta gcgtgccgtg ttgacaagat
     4381 taactttact gactttagcg tcaattaatc agagcaacgg taaaacaatg aaagtgtaaa
     4441 aaacactttt gcgccaatta tggagaaaaa aagaaaattt gatggagagt gatgagagaa
     4501 tattacaaca caatgatttt gcagagatta tgaagaacta tactggatga ctggtgataa
     4561 ataaagcaaa taaccaggat taatctgtat taatttataa gaaagcaact taatacccgc
     4621 agaatgattt ctgcgggtaa gtattagctt attttttcga gcattaatcc cgcgcgtaat
     4681 cccaacgcta ccaacggatt agggaataac acatactcta catcatgggt tacggtaaaa
     4741 cgttcctctc cgtcctgcgc cagcaatgtt cctttctcaa acggcataaa attcagcgtg
     4801 tcacttgcca tatgcatttc gaaggacggc gagtggcgag taatttgcga aaccacccga
     4861 taacggagcg gcggtgttct cacgataccg acactctcac cagatagcag cgcagcaatt
     4921 gcgctggcag ttactgcaaa ctggcgaaga tcgttttgcc caaagggcaa cgctttgcca
     4981 agttccagcg tacaggccag cgcgccaaaa tgtctggcgc tgaaatgggt aaacgtacca
     5041 ccaggttcct gatggaacac cagcgcctcc agccccgccg cacccagcca cgtcagaaat
     5101 ttctcgtccc agggaatgtc gcgttgcggt aatacaccga actgcggatg caaggagcca
     5161 cgaattgcgg tatgtagatc aaggtgccag cgcacagatt ctttgccctg gtcataaaaa
     5221 tcttccaggc actgttccag ttcgcgcgcc cgacaggttt ctccgctttc agcaaatagc
     5281 tgccaacgac cgccaaacat tcgattcata tcgctatggc aataacgttt cccttgcttc
     5341 agcgcaggag gattcccgag gatcaccagc aaccgccaac gtaacgggat ctcgccgtga
     5401 gatatcgcgc caagcaacgc gtccagcatt tccacaggtg ccgtctcatc accgtggatc
     5461 cccgcagaaa tcaccagcgc gccttgcggt ggcgttaatg gcgtcagttc cagcacacca
     5521 tcgcccagcc agcgccagcg aacgccgttg atttctcgct cggtgataac cggtttttta
     5581 cccgttaagg tcagagcaag aaaattatcc attgccccct ccctcgcgct ggaacggata
     5641 aaccgaaccg agattcagta attggctcaa tacatccagt gcttcccgcc cttcgcgcag
     5701 caattgcggg tcggccagat cggcagcagt aagacgatcg cggtagtaac gatccaccca
     5761 gtcattgagc gcattaaaca aggtatcgtt catcatcacc gccggattca ccgcccggcg
     5821 ttcttcttct gtcaatacca cccgcaaccg caggcacgcc gggccgccgc cattcgccat
     5881 gctttcacgt aagtcaaaga cttttagttc gctaatcggg ttgtcagcgg caaggagttc
     5941 attgagataa ccccatactc cggcgtgttc ccgacactcc tgaggcagca ccaacatcat
     6001 ggaaccatca tcgcggctca acagttggct gttaaacaga taggtagaca ccgcatccga
     6061 cacggaaacc tgagttgccg gaacttctat cgccataaaa ccgttcaccc gcgcccgcag
     6121 gtttgccagt aactgtgact ggcgagcgaa cgcctgttgg tggcaaaaca gcacctggcg
     6181 gttacttacg gcaatcacgt cattatgaaa aacaccctgg tcgataacgt ccgggttttg
     6241 ctgggcgaaa atcacctgtt ggggattcac ctgattaagc cttgccaccg cctcgctggc
     6301 ttcgcgagtc tgtcgcgccg gataacggga aggccgggta tcattgcctt cttctcgccc
     6361 gtagacaaaa agttgcatac ccggctcacc gtaatgaccg ccgagacgat tgtggtttgc
     6421 cgccccctca tcaccgagca acgctacctg cggcaacgcc gaatggacgc taaatttctc
     6481 ttcgtcgtta aaaatagctt ttaacagcga ttcagtgacg ggcgcttcca gcgaacggtg
     6541 aaatttattg ttcaggttgg caacggtgag atgcactttg ccatccagcg tatcggcaga
     6601 tggcgcgatc gttgccgcat tggctaccca cattggcgaa gcggagctga cgctggaaag
     6661 ccagtgcggt gcctggcgtg caactttttc cagtacctgc tcatcgctac cactgaatcc
     6721 caactgacgc agcaccggaa taaacggacg ctcgtgcggc gggatcacgg cctgggggaa
     6781 tcctgcatcg gcaagggttt tcattttcag taagccctgt ttcgccgcca gtcgcgggtt
     6841 agacacctga aaacggtgac gggtagaggc ttcattacca aacgacaggc cagcgtaatg
     6901 atgcgtcagc cctaccagcc cgtcgaaatt aacttcccag gcgttcatcg caccacctca
     6961 tcggaaaaat ccagcccggg gttaagcgtt gcgggcaaag ttaacgagtc cgactccagg
     7021 ctcgccatag gccatgcgca gtaatctgcg gcataccagg cgctggggcg atggttaccg
     7081 gatgcaccaa tgccgccgaa tggcgcggta ctggcagcac cagtaagcgg tttgttccag
     7141 ttaacaatcc ccgcccgcgc ctccagcaac agttgatcga atttttcccg ttcgggggaa
     7201 accagaccgc aagagagtcc gaagcgagtg ttattcgcca ttagaatcgc ttcctcgaaa
     7261 gaatcataac gccagacgcg caataacggt ccgaacacct cttcatctgg tacgccagca
     7321 acgcctgtca tttcaatgat ccccggcgtc agcaacgatg tctctaattg taataagcgc
     7381 ggcgcaagca gggttcgtcc gcccatcgct tccagttgct gccaggcagt aaccacctgc
     7441 tgtgcggcct gttcagaaat cagcccgcca ataaacggct gcggttcgtc atcccagttg
     7501 cccggcgtta atcgctggct gacggcaacc agacgagcaa gaaacgcatc gccctgcgct
     7561 ccgcttttga gcaataaacg gcgggcgcag gtgcagcgtt gcccggctgt gacaaacgcc
     7621 gactgaatgg tcagatggac agccgcgtcg atatccgcca cctcatcgat aattagcgga
     7681 ttattaccgc ccatctcaag ggcgagaatt ttctccggct gaccggagag ctggcgatgc
     7741 agctggtagc cggtattggc gcgaccggta aacagcaaac cgtcgagatc ctccagcgca
     7801 ctcagcgcct gacccgtttc acgcccgccc tgcaccaggt tcagcacgcc cggcggcaag
     7861 ccagcctgct gccataaacg cattaccgct tcgccactcc acggtgtcag ttcgctgggt
     7921 ttaaagataa tggtgttacc tgccagcaat gccggaacga tatgtccgtt cggcaaatga
     7981 ccagggaaat tatacggccc aaacaccgcc agcacgccgt gcgggcgatg tcgcaggctc
     8041 gccgcaccgt ccggcatttc actacgctgc tcgccggtac gaacgtgata cgccttaatt
     8101 gatatcgcga ttttattgat catcgccgtc acttcggttg ccgcttccca gcgcagctta
     8161 cccgtttctc tggcaataat cgcggttaat tcggctttat tgctttccag caatccggca
     8221 aagcgttcga caacgacctg acgttcagcc aatgagagcc gcgcccagcg cggaaacgcc
     8281 gcacgggctg cccgacaagc ctgttcgacc tgagcggcat cggcatcatt gccttgccat
     8341 aacacctcgc ccgataccgg attacgcttc acacgcgatg cgccctggcc cgttatccag
     8401 tcaccgttaa tccataaagt catgctgttt tctccactgc gcacaggcgc accagacgaa
     8461 cgcgatcccc tgcgtggcat ttgagggcat ccagttgtgc ggcggttaaa atcaaacgct
     8521 cggttgccgg atcggtacgc gccagcacca cgcggaaatg gtgataattt tcattggcga
     8581 ccaggcaggc cggaaaatcg ccctgcgcag gctgcccttc tgccacttcc accagccgac
     8641 ttttacggat ggcgcgcacg cggtcgatgt cacactcaag cgttggcccg ccgtcgaaga
     8701 tgtcgatata gttgcggtaa cgaaaacctt ctttctccag caccgcgcgg gcaggcgcgg
     8761 tttgcggatg tacctgaccg atgacgtcct gggcttcctg ggataaaaag tgggtataga
     8821 tcggatgttt cggcatcagt tctgcaataa atgccttttg cccggtgccg cagagaaaat
     8881 cggcgcggct aaaatccatc gaaaagaagc gtttaccgag gctttgccag aacggtgaat
     8941 agccgtgttc gtcaatcacc ccgcgcattt cagcaaccac tttgtcatta aacttgtcgc
     9001 gaaaagccgc cataaacata aagcgcgatt tcgacagcaa atagccgttg ccctctttgc
     9061 gccagtccgg gtcgagaaac agcgtgcaca gctcgctgct gccggtgtga tcgttactaa
     9121 gaaacagcgt cggcaatgcg ttatagacat tcagctcttt tgaggcgtga accaacgtgc
     9181 cgacccgata gttgtgccag ggatcgttca gcccaaccgc cacctcaatg gcgcaaatcc
     9241 ccgccacggt gcctgtctcg ctatcttcca gcacgaacac atagccctgc tcgcttttgg
     9301 gcagttcgcc ttgccaggtt ttgattgccc tttcgatacg cgcggaaagc gtggcttcat
     9361 tagcgggaag cgacgtcagg ccgccgcccg ttttgctggc aagctgcatc agcgccgaga
     9421 catctgagcg ctcaacggga cggatgacca tcatgatgaa cctcggctaa caaaatgttc
     9481 gcaagcagct gcaaagcgat ccagtccggt cgtcacctct tcttcgctga cattgagcgc
     9541 aggcgcaaaa cgcaccacgt tgccacccgc aatcagtacc ataacgcctg ctttcgccgc
     9601 ctcctgagag atctgtttcg cttgtccggc gtaatcggca ttcagtacac agccaatcaa
     9661 caaacctaag ccgcgaactt cactgaacaa accgtagcgg tgattaatgg tattaagacg
     9721 ctcaacaaac cagtcgtgac gctgtttaac gccattaagc atctctggtg tgttgatgag
     9781 ctccagcact ttgcccgcca ccgccgaggc cagcggattg ccgccatagg tggtgccatg
     9841 agtgccaacg gtcatcacgc tggcgcactc ttcggttgtt aacaacgcac cgaccgggaa
     9901 atcgccgccc agcgctttgg cggtagttaa cagatcaggt gtcacgccgt agtgcatata
     9961 ggcatacagt tccccggtgc gcccgacgcc ggtttgtact tcatcaaaaa tcaacagcgc
    10021 attgtggcgg tcacacaatt cacgcagacc ttgtaaaaac gcgttgctgg ctggcaccac
    10081 accgccttcc ccctggatgg gttcgacaat caccgcacag gtggcgtcgt caatcagcgc
    10141 gctggcagag ttaatatcgt tatatgcagc atgacggata tctggtggca gtggcgcaaa
    10201 atcctgtgaa taggctggct gcccacccgc actgacagta aacagcgtgc gaccatgaaa
    10261 cgcattttta aacgccatga taccgctctt atggctgccg tagcggtcgt gagcgaattt
    10321 acgcgccagt tttagcgccg cttcgttggc ttccgcaccg gagttacaaa agaagacgcg
    10381 atcggcaaac gtggcgtcga tcaatttttt cgccagtcgc agtaccggct cgttggtgta
    10441 accgttgccg gtatgccaga acttactcgc ctgttcgttc agcgcttcac gcagttccgg
    10501 atgcgcatgg cccagcgcgt tcaccgcaat gccacccgcg aagtcgatat actctttccc
    10561 ctgctgatcc cacaagcgcg aaccttcgcc acgtaccggt ataaagggtg ccggagcgta
    10621 aacaggtatc atccattcat caaagttttc acgcgtaatt ggctgagaca tagcgacctc
    10681 tacagtaaat aattcgttat ttatatgtta acaataagta atgtttgcgc tgtaaatgta
    10741 gattgcaggg ttcgtgccag ccagtgataa aagtgcataa acggcggagg ctaactggaa
    10801 atcaaggagt tataaccaaa ccatatgcat ttaaagtgca tataaagtga atacgtttgc
    10861 gatgtgggtg aataaaaaga ataaaaaacg caatgttatg cagaagtaaa atataattct
    10921 ggaattgtga tcattgacga aatttactgg aaattactgc gccattctga cgcagcgcgc
    10981 accaaaagcg ggcatttttt gcgccatcgt tgacatcatt aacaaccatc gatcaaatca
    11041 cttaacaaca ggcggtaagc aacgcgaaat tctgctacca tccacgcact ctttatctga
    11101 ataaatggca gcgactatga aatttgtctc ttttaatatc aacggcctgc gcgccagacc
    11161 tcaccagctt gaagccatcg tcgaaaagca ccaaccggat gtgattggcc tgcaggagac
    11221 aaaagttcat gacgatatgt ttccgctcga agaggtggcg aagctcggct acaacgtgtt
    11281 ttatcacggg cagaaaggcc attatggcgt ggcgctgctg accaaagaga cgccgattgc
    11341 cgtgcgtcgc ggctttcccg gtgacgacga agaggcgcag cggcggatta ttatggcgga
    11401 aatcccctca ctgctgggta atgtcaccgt gatcaacggt tacttcccgc agggtgaaag
    11461 ccgcgaccat ccgataaaat tcccggcaaa agcgcagttt tatcagaatc tgcaaaacta
    11521 cctggaaacc gaactcaaac gtgataatcc ggtactgatt atgggcgata tgaatatcag
    11581 ccctacagat ctggatatcg gcattggcga agaaaaccgt aagcgctggc tgcgtaccgg
    11641 taaatgctct ttcctgccgg aagagcgcga atggatggac aggctgatga gctgggggtt
    11701 ggtcgatacc ttccgccatg ctaatccgca aacagcagat cgtttctcat ggtttgatta
    11761 ccgctcaaaa ggttttgacg ataaccgtgg tctgcgcatc gacctgctgc tcgccagcca
    11821 accgctggca gaatgttgcg tagaaaccgg catcgactat gaaattcgca gcatggaaaa
    11881 accgtccgat cacgcccccg tctgggcgac cttccgccgc taatttagca gctctcctgg
    11941 ctcaaactgg gtcaggagaa ttaaccttga gaaaaatcaa caaactgtca gtaatgattt
    12001 gttgcctgcc gtcctttgtt ataccgtcac tgcgttttta gttgtctgac cacttctcta
    12061 ttatcaagtt tgatatagga aactccacga tgaatgctga gcgtaaattt cttttcgcct
    12121 gtcttatttt tgcgctggtc atttacgcta tccacgcttt cggtttattc gatctgctca
    12181 ccgatttacc ccacttacag acactcattc gccagagcgg attgttcggt tatagcctct
    12241 atattctgtt attcatcatt gccaccctct ttctgttacc aggaagcata ctggtgatcg
    12301 ctggaggaat agtttttggc ccgctcttag ggacactact ctcattaatt gccgccacgc
    12361 tggcctcctc gtgctcattc ctgctggcgc ggtggctggg acgtgattta ctgctgaaat
    12421 acgtgggcca tagccatacc ttccaggcca ttgaaaaagg cattgcgcgt aacggtattg
    12481 attttcttat tctgacccgc ttaatcccgt tgtttcctta caatattcaa aattacgctt
    12541 acggattaac caccatcgcc ttctggcctt atacccttat ttcggcactc acgaccctgc
    12601 ccggtattgt tatttatacc gtgatggcaa gcgatctcgc caatgaaggc attacgct
//
LOCUS       DADMJE010000124        12573 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.125, whole genome shotgun sequence.
ACCESSION   DADMJE010000124 DADMJE010000000
VERSION     DADMJE010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12573
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.125"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            214..1311
                     /gene="mltA"
                     /locus_tag="JN001_003036"
     CDS             214..1311
                     /gene="mltA"
                     /locus_tag="JN001_003036"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008785702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase A"
                     /protein_id="HAY9054196.1"
                     /translation="MKGRWVKYLLMGTVVAMLAACSSKSTDRGQQYKDGKFTQPFSLV
                     NQPDAVGAPINAGDFAEQINHIRNSSPRLYGNQSNVYNAVQEWLRAGGDTRNMRQFGI
                     DAWQMEGADNYGNVQFTGYYTPVIQARHTRQGEFQYPIYRMPPKRGRLPSRAEIYAGA
                     LGDKYILAYSNSLMDNFIMDVQGSGYIDFGDGSPLNFFSYAGKNGHAYRSIGKVLIDR
                     GEVKKEDMSMQAIRHWGETHSEAEVRELLEQNPSFVFFKPQSFAPVKGASAVPLVGRA
                     SVASDRSIIPPGTTLLAEVPLLDNNGKFNGQYELRLMVALDVGGAIKGQHFDIYQGIG
                     PEAGHRAGWYNHYGRVWVLKTAPGAGNVFSG"
     gene            1388..2194
                     /gene="tcdA"
                     /locus_tag="JN001_003037"
     CDS             1388..2194
                     /gene="tcdA"
                     /locus_tag="JN001_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA cyclic N6-threonylcarbamoyladenosine(37)
                     synthase TcdA"
                     /protein_id="HAY9054197.1"
                     /translation="MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSW
                     AAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRV
                     TVVDDFVTPDNVAQYMSAGYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQID
                     PTQIQVTDLAKTIQDPLAAKLRERLKSDFGVVKNSIGKLGVDCVFSTEALVYPQSDGT
                     VCAMKATAEGPKRMDCASGFGAATMVTATFGFVAVSHALKKMMAKAARQG"
     gene            complement(2245..2688)
                     /gene="csdE"
                     /locus_tag="JN001_003038"
     CDS             complement(2245..2688)
                     /gene="csdE"
                     /locus_tag="JN001_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase sulfur acceptor subunit
                     CsdE"
                     /protein_id="HAY9054198.1"
                     /translation="MTNPQFAGHPFGTTVTAETLRNTFAPLTQWEDKYRQLIMLGKQL
                     PALPDELKAQAKEIAGCENRVWLGYTVAENGKMHFFGDSEGRIVLGLLAVLLTAVEGK
                     TAAELQAQSPLALFDELGLRGQLSASRSQGLNALSEAIIAAAKQV"
     gene            complement(2688..3893)
                     /gene="csdA"
                     /locus_tag="JN001_003039"
     CDS             complement(2688..3893)
                     /gene="csdA"
                     /locus_tag="JN001_003039"
                     /EC_number="3.13.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase CsdA"
                     /protein_id="HAY9054199.1"
                     /translation="MNVFNPAQFRAQFPALQDAGVYLDSAATALKPEAVVEATRQFYS
                     LSAGNVHRSQFAEAQRLTARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYA
                     RPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQRLPDVDLLPELITPR
                     SRILALSQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADVQQLDIDFYAF
                     SGHKLYGPTGIGVLYGKSELLEAMSPWLGGGKMIHEVSFDGFTTQSAPWKLEAGTPNV
                     AGVIGLSAALEWLADYDINQAENWSHSLATLAEDALAKRPGFRSFRCQDSSLLAFDFA
                     GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAV
                     DRALELLVD"
     gene            4085..4312
                     /locus_tag="JN001_003040"
     CDS             4085..4312
                     /locus_tag="JN001_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417289.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgdI/YgdR family lipoprotein"
                     /protein_id="HAY9054200.1"
                     /translation="MKKTAAIISACMLTFALSACSGSNYVMHTNDGRTIVSDGKPQTD
                     NDTGMISYKDANGNKQQINRTDVKEMVELDQ"
     gene            4663..5580
                     /locus_tag="JN001_003041"
     CDS             4663..5580
                     /locus_tag="JN001_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005130970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GcvA"
                     /protein_id="HAY9054201.1"
                     /translation="MSKRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSL
                     EDFLGLKLFRRRNRSLLLTEEGQSYFLDIKEIFSQLTEATRKLQARSAKGALTVSLLP
                     SFAIHWLVPRLSSFNSAYPGIDVRIQAVDRQEDKLADDVDVAIFYGRGNWPGLRVEKL
                     YAEYLLPVCSPLLLTGEKPLKTPEDLAKHTLLHDASRRDWQTYTRQLGLNHINVQQGP
                     IFSHSAMVLQAAIHGQGVALANNVMAQSEIEAGRLVCPFNDVLVSKNAFYLVCHDSQA
                     ELGKIAAFRQWILAKAAAEQEKFRFRYEQ"
     gene            5599..5994
                     /locus_tag="JN001_003042"
     CDS             5599..5994
                     /locus_tag="JN001_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HAY9054202.1"
                     /translation="MTSRFMLIFAAISGFIFVALGAFGAHVLSKTMGAVEMGWIQTGL
                     EYQAFHTLAILGLAVAMQRRISIWFYWSSVFLALGTVLFSGSLYCLALSHLRLWAFVT
                     PVGGVSFLAGWALMLVGAIRLKRKGVSHE"
     gene            5987..7087
                     /gene="rlmM"
                     /locus_tag="JN001_003043"
     CDS             5987..7087
                     /gene="rlmM"
                     /locus_tag="JN001_003043"
                     /EC_number="2.1.1.186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (cytidine(2498)-2'-O)-methyltransferase
                     RlmM"
                     /protein_id="HAY9054203.1"
                     /translation="MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENSGYVIY
                     ECYQPDDGDKLIRELPFSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGE
                     LRVEVADTNESKELLKFCRKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYT
                     GYSYSNNNSPFYMGIPRLKFPAEAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDL
                     GACPGGWTYQLVKRNMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVC
                     DMVEKPAKVAALMAQWLVNGWCRETIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINA
                     QIQARQLYHDREEVTVHVRRIWAAVGGRRDER"
     gene            complement(7131..7862)
                     /gene="fucR"
                     /locus_tag="JN001_003044"
     CDS             complement(7131..7862)
                     /gene="fucR"
                     /locus_tag="JN001_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose operon activator"
                     /protein_id="HAY9054204.1"
                     /translation="MKAARQQAIVDLLLNHTSLTTEALSEQLKVSKETIRRDLNELQT
                     QGKILRNHGRAKYIHRQNQDSGDPFHIRLKSHYAHKADIAREALAWIEEGMVIALDAS
                     STCWYLARQLPDINIQVFTNSHPICYELGKRERIQLISSGGTLERKYGCYVNPSLISQ
                     LKSLEIDLFIFSCEGIDSSGALWDSNAINADYKSMLLKRAAQSLLLIDKSKFNRSGEA
                     RIGHLDEVTHIISDERQVATSLVTA"
     gene            complement(7920..8342)
                     /gene="fucU"
                     /locus_tag="JN001_003045"
     CDS             complement(7920..8342)
                     /gene="fucU"
                     /locus_tag="JN001_003045"
                     /EC_number="5.1.3.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose mutarotase"
                     /protein_id="HAY9054205.1"
                     /translation="MLKTISPLISPELLKVLAEMGHGDEIIFSDAHFPAHSMGPQVIR
                     ADGLLVSDLLQAIIPLFELDSYAPPLVMMAAVEGDTLDPEVERRYRNALSLQAPCPDI
                     IRINRFAFYERAQKAFAIVITGERAKYGNILLKKGVTP"
     gene            complement(8344..9762)
                     /gene="fucK"
                     /locus_tag="JN001_003046"
     CDS             complement(8344..9762)
                     /gene="fucK"
                     /locus_tag="JN001_003046"
                     /EC_number="2.7.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417283.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fuculokinase"
                     /protein_id="HAY9054206.1"
                     /translation="MKQEVILVLDCGATNVRAIAVNRQGKIVARASTPNASDIAMENN
                     TWHQWSLDAILQRFADCCRQINSELTECHIRGIAVTTFGVDGALVDKQGNLLYPIISW
                     KCPRTAAVMDNIEQLISAQRLQAISGVGAFSFNTLYKLVWLKENHPQLLERTHAWFFI
                     SSLINHRLTGEFTTDITMAGTSQMLDIQQRDFSPQILQATGIPRRLFPRLVEAGEQIG
                     TLQNSAAAMLGLPVGIPVISAGHDTQFALFGAGADQNEPVLSSGTWEILMVRSAQVDT
                     SLLSQYAGSTCELDSQAGLYNPGMQWLASGVLEWVRKLFWTAETPWQMLIEEARLIAP
                     SADGVKMQCDLLSCQNAGWQGVTLNTTRGHFYRAALEGLTAQLQRNLQMLEKIGHFKA
                     SELLLVGGGSRNTLWNQIKANMLDIPVKVLDDAETTVAGAALFGWYGVGEFNSPEEAR
                     AQIHYQYRYFYPQTEPEFIEEV"
     gene            complement(9759..11504)
                     /gene="fucI"
                     /locus_tag="JN001_003047"
     CDS             complement(9759..11504)
                     /gene="fucI"
                     /locus_tag="JN001_003047"
                     /EC_number="5.3.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000724154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose isomerase"
                     /protein_id="HAY9054207.1"
                     /translation="MKKISLPKIGIRPVIDGRRMGVRESLEEQTMNMAKATAALLTEK
                     LRHACGAAVECVISDTCIAGMAEAAACEEKFSSQNVGLTITVTPCWCYGSETIDMDPT
                     RPKAIWGFNGTERPGAVYLAAALAAHSQKGIPAFSIYGHDVQDADDTSIPADVEEKLL
                     RFARAGLAVASMKGKSYLSLGGVSMGIAGSIVDHNFFESWLGMKVQAVDMTELRRRID
                     QKIYDEAELEMALAWADKNFRYGEDENNKQYQRNAEQSRAVLRESLLMAMCIRDMMQG
                     NSKLADIGRVEESLGYNAIAAGFQGQRHWTDQYPNGDTAEAILNSSFDWNGVREPFVV
                     ATENDSLNGVAMLMGHQLTGTAQVFADVRTYWSPEAIERVTGHKLDGLAEHGIIHLIN
                     SGSAALDGSCKQRDSEGNPTMKPHWEISQQEADACLAATEWCPAIHEYFRGGGYSSRF
                     LTEGGVPFTMTRVNIIKGLGPVLQIAEGWSVELPKDVHDILNKRTNSTWPTTWFAPRL
                     TGKGPFTDVYSVMANWGANHGVLTIGHVGADFITLASMLRIPVCMHNVEETKVYRPSA
                     WAAHGMDIEVLQERL"
     gene            complement(11537..>12573)
                     /gene="fucP"
                     /locus_tag="JN001_003048"
     CDS             complement(11537..>12573)
                     /gene="fucP"
                     /locus_tag="JN001_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-fucose:H+ symporter permease"
                     /protein_id="HAY9054208.1"
                     /translation="ITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAA
                     NPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMSPEQ
                     LSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRL
                     ARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGR
                     FTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHVGLIALTLCSAFMSIQYPTIFS
                     LGIKNLGQDTKYGSSFIVMTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF
                     ARFRSQTATN"
BASE COUNT         3010 a         3144 c         3332 g         3087 t
ORIGIN      
        1 ccgcgtccgt ggatgcgcac tatactccgc tcgcgttttc atgcaacctt ttttttaccc
       61 cgatcacgga tttagcatga ttttgaacaa aaacaaacca ctaaagccta ttttttgtgc
      121 aaaatttgcg tcagggagag gctgctcatt tcattaaacg cggcggtttg ttatcttcgt
      181 tgcgccttat tttttaacct gaagaagaga acaatgaaag gacgttgggt aaagtacctt
      241 cttatgggca cggttgtggc aatgcttgcc gcctgctctt ccaaatcaac cgatcgcgga
      301 cagcaatata aagacgggaa atttacccag cctttctctc tggtgaacca gccagatgcc
      361 gttggcgcgc cgattaacgc cggtgatttt gccgagcaaa ttaaccatat ccgtaattcg
      421 tcaccgcgtc tgtatggcaa ccagagtaat gtttataacg cggtgcaaga gtggctgcgc
      481 gcaggcggtg atacccgcaa tatgcgccag ttcggcattg atgcctggca gatggaaggt
      541 gccgacaact atggtaacgt gcagtttaca ggctattaca cgccggtaat tcaggcgcgc
      601 catacccgcc agggcgagtt ccagtatcct atttaccgta tgccgccaaa acgtggtcgt
      661 ctgccgtctc gtgcggagat ctacgcgggg gcattgggcg ataaatacat cctcgcttac
      721 agcaactctc tgatggataa cttcattatg gatgtgcagg gtagtgggta tatcgacttt
      781 ggtgatggca gtccgcttaa ctttttcagc tatgcaggga aaaacggtca tgcctatcgc
      841 agcattggta aggtgctgat cgaccgtggc gaagtgaaaa aagaagatat gtcgatgcag
      901 gcgattcgtc attggggcga aacacacagt gaagccgagg ttcgcgagct gctggaacag
      961 aacccgtctt tcgtcttctt taaaccgcaa tcttttgcac cggtgaaagg ggcaagtgcg
     1021 gtgccgctgg ttggccgtgc ttctgttgcc tccgatcgtt caattattcc gccaggtact
     1081 accttgctgg cagaagtgcc gctgctggat aataacggca aatttaacgg tcagtacgaa
     1141 ttgcgtctga tggtggcgct ggatgtcggt ggcgcaatca aaggccaaca cttcgatatc
     1201 tatcaaggga tcgggccgga agccggacat cgcgcaggtt ggtacaacca ctatggacgt
     1261 gtctgggtgc tgaaaaccgc cccgggcgca ggtaacgtct ttagcggctg atgtgttatt
     1321 ctgtataccg tttttacgga tacgacaggg tgagggataa cctcaccctt tttaattctg
     1381 aggtgctatg tctgtggtaa ttagtgatgc atggcgtcag cgttttggtg gcacagcgcg
     1441 tctgtatggt gaaaaagcgt tgcaactgtt tgctgacgcg catatttgtg tggttggtat
     1501 cggtggtgtc ggttcctggg cggcggaagc gctggcgcgc acggggattg gcgcaatcac
     1561 gcttatcgat atggatgatg tgtgcgtcac caataccaat cggcaaattc acgctctgcg
     1621 cgataacgtc gggctggcaa aagcggaagt catggcggag cgcattcgcc agattaaccc
     1681 ggagtgccgt gtaacggtgg tggatgattt cgtgacgccg gataacgtag cgcaatatat
     1741 gagtgccggt tattcgtacg tgattgatgc cattgatagt gtacgaccca aagcggcgct
     1801 gattgcttat tgtcggcgca ataaaatccc gctggtcacg accggtggcg cgggtgggca
     1861 gattgacccg acgcagattc aggttaccga tctggcgaaa acgattcagg acccgctggc
     1921 ggcgaagttg cgcgagcgcc tgaaaagcga ttttggcgta gtgaaaaaca gtataggtaa
     1981 gctcggcgtg gattgcgtgt tttctactga agcgctggtg tacccgcagt cagacggtac
     2041 ggtgtgtgcg atgaaagcca cggcagaagg gccgaagcgg atggattgtg catctggatt
     2101 tggcgcggca acgatggtga ccgccacctt tgggtttgtt gcggtttctc atgcgctgaa
     2161 gaagatgatg gcgaaagcag cgcgtcaggg ttaaacaatc aggtcggatg cgacgcgaac
     2221 gtcttatccg acctggttct gtgcttaaac ctgcttcgcc gcagcgataa ttgcctcgct
     2281 taacgcattc aacccctggc tgcgtgaggc gctaagctgc ccacgcaatc ccagctcatc
     2341 aaacaatgcc agcggcgact gtgcctgtaa ttcggcggcg gttttcccct caacggcagt
     2401 caacaacacc gccaacaggc cgagcacaat gcgcccttcg ctgtcgccaa agaagtgcat
     2461 tttaccgttt tcagccacgg tatatcccag ccagacgcgg ttttcgcatc cggcaatctc
     2521 tttagcctgc gcttttaact cgtctggcaa agccggaagc tgtttcccca gcatgatcaa
     2581 ctggcgatat ttatcttccc attgcgtcaa cggtgcgaag gtattgcgta acgtttctgc
     2641 ggttacggtt gtgccgaacg gatgtccggc gaattgcggg tttgtcatta atccaccaat
     2701 aattccagcg cgcggtcaac ggcattcacc agcgcatcca catcactctt tgtattatat
     2761 ggcgcaaaag aggcgcgcag tgtgccggtt acgcctaatt ctgccagtag cggctgagca
     2821 caatgttgcc cggcccgcaa ggcaataccg tactccgcca gtagcgtcac catatcgctg
     2881 tgatgaacgc cagcaaaatc aaaggccagc aggctggaat cctggcagcg gaatgaacga
     2941 aagcctggac gtttcgccag cgcatcttcc gccagcgttg ctaagctatg gctccagttt
     3001 tcggcctggt tgatatcgta atctgccagc cattccagcg ccgcgcttaa tcctatgaca
     3061 ccagccacat ttggcgttcc tgcttccagt ttccacggcg cagattgagt cgtgaagccg
     3121 tcaaaactca cttcgtgaat cattttgccg ccacccagcc agggcgacat cgcttccagc
     3181 agttctgatt tgccatacag cacgccgata cccgtcgggc catacagttt gtgaccagag
     3241 aaagcataga aatcgatatc cagttgctga acatccgcgg ggaaatgcac cgccccctga
     3301 gcaccatcaa ccatcaccac catccctgct gaatgagcaa aggtaatcgc tcgcgccaga
     3361 tccgggcaac cgccagtaac gttcgacatc tgactcaacg ccagaatccg actacgggga
     3421 gtaatcagtt ctggcaacaa atcgacatcc ggcagtcgct gcgcattaag cggcaatttc
     3481 accactttgg ctccagtttg ttgggcgacc atcagccagg ggacgaggtt ggcgtggtgt
     3541 tctgccacgc tgacaataat ctcatcgccc ggttgcagac gcggacgcgc atagcattgt
     3601 gccaccatgt tgatggattc agtggtgccg cgcgtccaga cgatagtttt atcatccggt
     3661 gcattcagta attgcgccac tttctctcgt gcagcttcat aacgcgcggt caggcgttgg
     3721 gcttcggcaa actggctgcg atggacgttt ccggcgctca ggctgtaaaa ctgtcgagtg
     3781 gcttcaacca cggcttcagg tttaagcgcg gtcgcggcgc tgtcgagata gacgcccgca
     3841 tcctgtagtg cgggaaactg ggcgcgaaac tgcgcgggat taaaaacgtt catggtactc
     3901 ctcggcttga tgcaccgatc gtgacgcaaa attcactttg atacaaggag agtgctaacc
     3961 atcagaatta tctggatatc ctggcgaagc cgcgtaagta acatatgctg aatagtgtta
     4021 ggcgttaatt ttagcctgtt aatcaatact gttaagattt attaatcgct ttaaggagaa
     4081 gatgatgaaa aagactgccg caattatttc tgcctgtatg ctgacttttg ccctgagcgc
     4141 ctgttccggt tcgaactatg tgatgcacac caatgacgga cgtaccatcg tctctgacgg
     4201 caaaccacag actgataacg ataccggtat gatttcgtat aaagacgcta atggcaacaa
     4261 acagcagatc aaccgtactg acgtgaaaga gatggtcgaa ctggatcagt aattcgcgat
     4321 cgcaaggtaa aaaaaagcac cgcaattagg cggtgctaca ttaatcacta tggacagaca
     4381 gggtaaatgt acaggaagtg aaaaaaggta gctttgctac catggtctga atcgcagacc
     4441 aattgcaaac acaacaacac aacatcacaa ccgtaagcca aaagttcacc agaacacgca
     4501 ttccgataaa acttttcgtt ccggctcagg aagtgccgcc actataggta tttgctggta
     4561 gaagctcaac ggacaattta taatggctca gattaaaaaa actaataggt tacatagtgt
     4621 gatctaattg ttaaattcat ttaacatcaa agtttaatag ccatgtctaa acgattacca
     4681 ccgctaaatg ccttacgagt ttttgatgcc gcagcacgcc atttaagttt cactcgcgca
     4741 gcagaagagc tttttgtgac ccaggccgca gtaagtcatc aaatcaagtc tcttgaggat
     4801 tttttggggc taaaactgtt ccgccgccgt aatcgttcac tcctgctgac cgaggaaggg
     4861 caaagctatt tcctcgatat caaagagata ttttcgcaat taaccgaagc gacgcgtaaa
     4921 ctccaggccc gtagcgccaa gggggcgttg acggtcagtt tactccccag tttcgccatt
     4981 cattggttgg ttccgcgact ttccagcttt aattcagctt atccgggaat tgacgttcga
     5041 atccaggcgg ttgatcgtca ggaagataag ctggcggatg atgttgatgt ggcgatattt
     5101 tatggtcggg gcaactggcc ggggctacgg gtggaaaaac tgtacgccga atatttattg
     5161 ccggtgtgtt cgccgctact gctgactggc gaaaaaccct tgaagacacc ggaagatctg
     5221 gctaaacata cgttattaca tgatgcttcg cgccgtgact ggcagacata tacccgacag
     5281 ttggggttaa atcatatcaa cgttcagcaa gggccaattt ttagccatag cgccatggtg
     5341 ctgcaagcgg ctatccacgg gcagggagtg gcgctggcaa ataacgtgat ggcgcaatct
     5401 gaaatcgagg ccggacgtct tgtttgcccg tttaatgatg ttctggtcag taaaaacgct
     5461 ttttatctgg tttgtcatga cagccaggca gaactgggta aaatagccgc ctttcgccaa
     5521 tggatcctgg cgaaagccgc tgctgaacaa gaaaaattcc gctttcgtta tgaacaataa
     5581 tttacgtagg gtacgaccat gaccagccgt tttatgctga ttttcgccgc cattagcggc
     5641 ttcatttttg tggctctggg cgcttttggc gcgcatgtgt taagtaaaac catgggggcc
     5701 gttgagatgg gctggatcca gaccggcctc gaataccagg cgtttcatac gctggcgatc
     5761 ttaggtctgg cggtggcaat gcagcgtcgc atcagtatct ggttttactg gagtagcgtt
     5821 ttcctcgcgt taggcacggt gttgttcagc ggcagccttt attgcctggc gctgtcccat
     5881 ctgcgtttgt gggcgtttgt cactccggtt ggcggcgtga gcttcctcgc gggctgggcg
     5941 ttaatgttag ttggtgctat ccgtttaaag cgcaagggcg taagtcatga ataaggttgt
     6001 attgctgtgc cgtccgggct ttgaaaaaga gtgcgccgca gaaattaccg ataaagccgg
     6061 ccagcgggaa attttcggtt ttgcccgcgt gaaagagaat tcgggttatg tcatttatga
     6121 atgttatcaa cctgatgatg gcgataagtt aatccgtgag ctgccgttca gttcattaat
     6181 ttttgcccgc cagtggtttg tggtggggga actcctgcag catttgccgc cagaagatcg
     6241 tattaccccc attgtcggca tgttacaggg cgtagtagag aagggcggtg aactgcgtgt
     6301 tgaagttgcc gataccaacg aaagcaaaga gttgctgaaa ttctgccgta aatttactgt
     6361 tccgctacgc gctgccttgc gcgatgccgg ggtgctggcg aactatgaaa cgccgaagcg
     6421 tccggttgtg catgtattct ttattgcacc aggctgctgc tataccggtt actcatacag
     6481 caacaataat tcgccgttct atatgggcat tccgcgcctg aaatttccgg cagaggcgcc
     6541 gagtcgttcc acgctcaaac tggaagaggc atttcatgtg tttattcctg cggatgagtg
     6601 ggatgaacgc ctggcgaacg ggatgtgggc ggtggattta ggcgcttgcc ctggcggctg
     6661 gacctaccaa ctggtgaagc gcaacatgtg ggtttattcc gtcgacaacg gcccgatggc
     6721 gcaaagtctg atggataccg ggcaggtgac gtggctgcgg gaagacggtt tcaaattccg
     6781 tccgacacgc agcaatatct cctggatggt atgcgatatg gttgaaaaac cggctaaagt
     6841 tgcggcattg atggcgcagt ggctggttaa tggctggtgc cgtgaaacca ttttcaatct
     6901 caaactgccg atgaaaaaac gctacgaaga agtatcacac aatctggcgt atattcaggc
     6961 acagcttgat gaacatggca taaatgctca gattcaggcg cggcagttgt atcacgatcg
     7021 cgaagaagtg acggtgcacg tccgccgcat ctgggctgcg gtgggtggtc gtcgcgacga
     7081 gcgataacag gcaaggccgg ggcgtcgtct tcggcctgct accctttccg tcaggctgtt
     7141 accaaagaag ttgcaacctg gcgctcatca gaaataatgt gcgttacctc atccagatgc
     7201 ccgatgcggg cttcccctga acgattaaat ttacttttat caatcaataa caacgattgc
     7261 gcggcacgtt ttaatagcat cgatttgtaa tcagcgttga tcgcattgga gtcccacagt
     7321 gcgccgctgc tatcgatccc ttcacaagaa aaaataaaca gatcgatttc cagcgattta
     7381 agttgggaaa tcagcgaggg attgacgtaa cagccatatt tgcgctcaag tgtgccgccg
     7441 gaactgatca gttgaatgcg ttcgcgttta ccgagttcat agcaaatcgg atggctattg
     7501 gtgaagacct gaatgttgat gtcaggcaac tggcgtgcca gataccagca agttgaactg
     7561 gcgtctaagg ctatcaccat cccttcttca atccacgcga gcgcctcgcg cgcgatatct
     7621 gctttatgcg cataatggct tttcagcctg atgtgaaagg gatcgccact gtcttgattt
     7681 tgacggtgga tatatttagc gcgtccatga ttgcgcagaa ttttaccctg cgtctgtaat
     7741 tcattgagat cgcgacgaat ggtttcttta ctgaccttta gctgttcaga gagagcttcc
     7801 gtggtcaggc tggtatggtt cagcagcagg tcgactatcg cttgctggcg tgccgctttc
     7861 atatttttca ccccatcatt cgataaccgc ccgcgtcatg cgggcgtacc ggtatgagat
     7921 tacggtgtta cccctttttt taaaagaata ttcccgtact tcgctcgttc gcctgtgata
     7981 acgatcgcaa aggctttttg cgcccgttca taaaacgcaa aacgattgat gcggatgatg
     8041 tcaggacacg gggcttgtag tgaaagcgca ttacggtaac gtcgttctac ttcaggatcg
     8101 agagtgtcac cttctaccgc cgccatcatc accagcggcg gtgcataact gtccagttca
     8161 aataacggga taatcgcctg gagcaagtcg ctcaccaaca ggccatcagc gcggatcacc
     8221 tgcggtccca tcgaatgggc gggaaagtga gcatcggaaa aaataatttc atctccatgt
     8281 cccatctctg ccagcacttt caatagttcg ggagaaatta acggcgaaat tgttttcagc
     8341 atttcacact tcctctataa attcaggttc agtttgcggg tagaaataac ggtactgata
     8401 atgaatctgt gcgcgggctt cttcagggct gttaaattcc cctacgccat accaaccgaa
     8461 cagcgcagct cctgcgacgg tcgtttcggc gtcgtcgaga acttttaccg gaatatcaag
     8521 catattggct ttaatctgat tccacaatgt gttgcgactt cctccaccga ctaacaataa
     8581 ttcagaggcc ttaaagtgcc cgattttttc cagcatctgt agattgcgct gtaattgcgc
     8641 agttaaccct tccagcgccg cgcgatagaa atgcccccgc gtggtattaa gcgtcactcc
     8701 ttgccagcca gcgttctgac acgacaataa atcacactgc atttttacgc catccgcgct
     8761 aggcgcgata agacgagctt cttcaatcaa catttgccag ggtgtttcag ccgtccagaa
     8821 cagttttctc acccattcca gcacgccgga tgccagccat tgcatacctg ggttatacaa
     8881 ccctgcctgg ctatccagtt cgcaggtgga accggcgtac tgacttaaca gcgaagtatc
     8941 aacctgggcg ctacggacca ttaaaatttc ccatgtaccg gaagagagca cgggttcatt
     9001 ttggtcggca ccagcgccaa aaagggcgaa ctgggtatcg tgacctgcgg aaatcaccgg
     9061 tatgccaacg ggtaagccga gcattgctgc ggcgctgttc tgtagcgtac caatctgttc
     9121 acccgcttcc accagacgag ggaagagtcg gcgtggaata ccagtggctt gtaaaatttg
     9181 cggactgaaa tcgcgttgct ggatatccag catctggctg gttccggcca tcgtgatatc
     9241 agtagtgaat tcgccggtta aacggtggtt aatcagcgac gaaataaaga accaggcgtg
     9301 cgtgcgttcc agcagttgtg gatgattttc tttcaaccac accaacttat ataacgtatt
     9361 gaaactaaag gctccgacgc cagaaatagc ctgcaaccgc tgtgcggaga tcaactgttc
     9421 aatattgtcc ataaccgctg ctgttcgcgg acatttccag ctaatgatcg gatagagcag
     9481 attgccttgc ttatctacca gagcgccatc cacaccaaag gtggtgacgg cgataccgcg
     9541 gatgtggcat tcagtcagtt cactattgat ttgccgacag caatcagcaa agcgttgcaa
     9601 aatggcgtct aaagaccact ggtgccaggt gttgttttcc atcgcgatat cgctggcatt
     9661 aggcgttgag gcgcgggcaa caatttttcc ctgccgatta accgcgatgg ccctgacatt
     9721 ggtcgcgcca cagtcgagta ccaggataac ttcttgtttc ataatcgctc ctgcaagact
     9781 tcaatatcca tgccgtgcgc agcccaggca gaaggacgat acactttggt ctcttcaacg
     9841 ttgtgcatac ataccgggat acgcagcatg gaggcgagag tgataaagtc agcgccaacg
     9901 tggccgatgg tcagaacccc atggttagcg ccccagttcg ccattaccga gtacacatcc
     9961 gtaaacggcc ctttaccggt gaggcgcggt gcaaaccagg tggttggcca ggttgagttg
    10021 gtgcgtttgt tgaggatgtc atgcacatcc ttcggcaatt ccacgctcca gccttccgcg
    10081 atttgcagta ccggtcccag gcctttgatg atgttgacac gagtcatggt gaacgggacg
    10141 ccgccttcgg taaggaagcg ggaagagtaa ccgccgccac ggaagtattc gtggatcgcc
    10201 gggcaccatt cggtagcggc gaggcaagcg tcagcctctt gctgagagat ttcccagtgc
    10261 ggcttcatcg tcgggttacc ttcgctgtcg cgttgtttac aggaaccgtc cagcgcagca
    10321 gaacctgagt tgatcaaatg gatgatgccg tgttctgcca gtccatcgag tttatgcccc
    10381 gttacacgct caattgcttc tggtgaccag taggtacgca catcggcaaa tacctgagcg
    10441 gtgccggtga gctggtgacc cattagcatt gccacgccgt taagactgtc gttttcggtc
    10501 gccacgacaa agggttcgcg cacgccattc cagtcaaatg aactgttgag gatcgcttcg
    10561 gcggtgtcac cattgggata ttgatcggtc cagtgacgtt gcccctggaa gcccgcagcg
    10621 atggcgttgt agccaagtga ttcttccacg cgaccaatat cggccagttt gctgttgcct
    10681 tgcatcatgt cgcggataca catcgccatc agtaaacttt cgcgcagaac tgcgcggctt
    10741 tgctcggcat tgcgttgata ctgtttgtta ttttcatctt cgccatagcg gaagttttta
    10801 tcagcccagg ccagtgccat ttccagttcg gcttcgtcgt aaatcttctg atcgatacgg
    10861 cgacgcagtt cggtcatatc caccgcctgg actttcattc ccagccagga ttcaaagaag
    10921 ttgtgatcaa cgatggaacc ggcgataccc atcgaaacgc cgcccagcga cagatagctt
    10981 ttacctttca tgctggcgac ggccaaaccg gcgcgggcaa agcgcagcag tttttcttca
    11041 acatcggcag gaatcgatgt gtcatcggca tcctgaacgt catgaccgta aatggagaat
    11101 gccgggatgc ctttctggct gtgagctgcc agagccgctg ccaggtaaac agcgccggga
    11161 cgttcagtgc cgttaaagcc ccaaatggct ttcgggcggg ttggatccat gtcgatggtt
    11221 tcactgccat agcaccagca aggcgttacc gtaatggtga ggcctacatt ctggctgctg
    11281 aatttttctt cgcaagcagc ggcttcagcc atacccgcga tacaggtatc ggaaatgaca
    11341 cactcgacgg cagctccgca ggcatggcgc agtttctcgg tcagcagtgc ggccgtagct
    11401 ttcgccatat tcattgtttg ttcttcaagc gactcacgaa cacccatgcg acgaccgtca
    11461 ataaccgggc ggataccaat tttcggtaag ctgatttttt tcattacaga ttcctcactt
    11521 tattcggaaa atatgttcag ttagttgccg tttgagagcg gaaacgggca aagataaaga
    11581 tgaccgcgaa gcagagtgcg gggatcagtt cagcagtggg gatgttgccc gccgcgtcac
    11641 tgacaaaacc catgaccgga gtgacaatac cgccgccaat aatggtcata acgatgaagg
    11701 acgaaccgta tttggtgtcc tggccgagat tcttaatgcc cagcgagaag attgttgggt
    11761 actgaatcga cataaaggcg ctgcataaag tcagggctat taagcccaca tgaccgccag
    11821 cgaaggctga gatcaggcac agtgccatag cgattaatgc gtaggcggcc aggactttgt
    11881 gtggtgcgaa gcgactgatg agccaggtac cggtgaaacg accaataaag aagcacacca
    11941 tggttccggt taaatagtta gcggcaaagc ctgcagtcat acctggaatt tcttctacag
    12001 cgtagcgaat caaatagctc cagcaggccg tttgtgcgcc aacgtagcag aattgcgcta
    12061 atactgccca gcgccagtgg cgaatacgcg ccaggcgaga aagcgatgcg gagaacgatc
    12121 cttgtttggc gtcactgtga ttatcactct gcaatgccgg gaatttcgtc agcatgatca
    12181 gcagggcgac cagtaacacg atagccacga tgatcatata aggtgtctgt accgataata
    12241 ccaggctgtg tttatacgca ctcaattgct ctggagacat tttatcgaga acgtcttgcg
    12301 attgatgtgg cacgttagac aaaataagac tttgcccaaa gacaaccgcg ataattgcgc
    12361 caaacgagtt aaatgtttgc gcaagattta agcggaagtg accactgctt tccggcccta
    12421 ataccgtaac aaaagggttt gcggcagttt ccagacaacc taatccggct gcaataataa
    12481 ataggccaac taaaaataag gtgtagttca ttatttctgc agcgggccag aataatgcag
    12541 cgcccagggc atataaaaat aacccagtaa taa
//
LOCUS       DADMJE010000125        12518 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.126, whole genome shotgun sequence.
ACCESSION   DADMJE010000125 DADMJE010000000
VERSION     DADMJE010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12518)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12518)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12518
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.126"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(93..1184)
                     /gene="ychF"
                     /locus_tag="JN001_003049"
     CDS             complement(93..1184)
                     /gene="ychF"
                     /locus_tag="JN001_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001538644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HAY9054209.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTKAGIEAANFPFCTIEPNTGVV
                     PMPDPRLDQLAEIVKPQRTLPTTMEFVDIAGLVKGASKGEGLGNQFLTNIRETEAIGH
                     VVRCFENDNIIHVSGKVNPADDIEVINTELALADLDTCERAIHRVQKKAKGGDKDAKA
                     ELAVLEKCLPQLENAGMLRALDLSAEEKAAIRYLSFLTLKPTMYIANVNEDGFENNPY
                     LDQVREIAAKEGSVVVPVCAAVEADIAELDDEERDEFMQELGLEEPGLNRVIRAGYKL
                     LNLQTYFTAGVKEVRAWTIPVGATAPQAAGKIHTDFEKGFIRAQTISFEDFITYKGEQ
                     GAKEAGKMRAEGKDYIVKDGDVMNFLFNV"
     gene            complement(1301..1885)
                     /gene="pth"
                     /locus_tag="JN001_003050"
     CDS             complement(1301..1885)
                     /gene="pth"
                     /locus_tag="JN001_003050"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HAY9054210.1"
                     /translation="MTIKLIVGLANPGAEYAATRHNAGAWFVDLLAERLRAPLREEAK
                     FFGYTSRVTLGGEDVRLLVPTTFMNLSGKAVAAMASFFRINPDEILVAHDELDLPPGV
                     AKFKLGGGHGGHNGLKDIISKLGNNPNFHRLRIGIGHPGDKNKVVGFVLGKPPVSEQK
                     LIDEAIDEAARCTEMWFTDGLTKATNRLHAFKAQ"
     gene            2163..2441
                     /gene="ychH"
                     /locus_tag="JN001_003051"
     CDS             2163..2441
                     /gene="ychH"
                     /locus_tag="JN001_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress-induced protein YchH"
                     /protein_id="HAY9054211.1"
                     /translation="MKRKNASLLGNVLMGLGLVVMVVGVGYSILNQLPQFNMPQYFAH
                     GAVLSIFVGAILWLAGARVGGHEQVCDRYWWVRHYDKRCRRSDNRRHS"
     gene            complement(2496..4175)
                     /gene="dauA"
                     /locus_tag="JN001_003052"
     CDS             complement(2496..4175)
                     /gene="dauA"
                     /locus_tag="JN001_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C4-dicarboxylic acid transporter DauA"
                     /protein_id="HAY9054212.1"
                     /translation="MNKIFSSHVMPFRALIDACWKEKYTAARFTRDLIAGITVGIIAI
                     PLAMALAIGSGVAPQYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVIIYPVSQQFGL
                     AGLLVAALLSGIFLILMGLARFGRLIEYIPVSVTLGFTSGIGITIGTMQIKDFLGLQM
                     AHVPEHYLQKVGALFMALPTINVGDAAIGIVTLGILVFWPRLGIRLPGHLPALLAGCA
                     VMGIVNLLGGHVATIGSQFHYVLADGSQGNGIPQLLPQLVLPWDLPNSEFTLTWDSIR
                     TLLPAAFSMAMLGAIESLLCAVVLDGMTGTKHKANSELVGQGLGNIIAPFFGGITATA
                     AIARSAANVRAGATSPISAVIHSILVILALLVLAPLLSWLPLSAMAALLLMVAWNMSE
                     AHKVVDLLRHAPKDDIIVMLLCMSLTVLFDMVIAISVGIVLASLLFMRRIARMTRLAP
                     VVVDVPDDVLVLRVIGPLFFAAAEGLFTDLESRLEGKRIVILKWDAVPVLDAGGLDAF
                     QRFVKRLPEGCELRVCNVEFQPLRTMARAGIQPISGRLAFFPNRRAAMADL"
     gene            complement(4300..5247)
                     /locus_tag="JN001_003053"
     CDS             complement(4300..5247)
                     /locus_tag="JN001_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HAY9054213.1"
                     /translation="MPDMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQI
                     NENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAGRITAVIPYFGYARQDRRVR
                     SARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLN
                     LDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVL
                     VDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIP
                     LSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMFEH"
     gene            complement(5398..6249)
                     /gene="ispE"
                     /locus_tag="JN001_003054"
     CDS             complement(5398..6249)
                     /gene="ispE"
                     /locus_tag="JN001_003054"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HAY9054214.1"
                     /translation="MRTQWPSPAKLNLFLYITGQRADGYHTLQTLFQFLDYGDTISIE
                     LRDDGDIRLLTPVEGVEHEDNLIVRAARLLMKTAADSGRLPTGSGANISIDKRLPMGG
                     GLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTLGADVPVFVRGHAAFAEGVGEIL
                     TPVDPPEKWYLVAHPGVSIPTPVIFKDPELPRNTPKRSIETLLKCEFSNDCEVIARKR
                     FREVDAVLSWLLEYAPSRLTGTGACVFAEFDTESEARQVLEQAPEWLNGFVAKGVNLS
                     PLHRAML"
     gene            complement(6249..6872)
                     /gene="lolB"
                     /locus_tag="JN001_003055"
     CDS             complement(6249..6872)
                     /gene="lolB"
                     /locus_tag="JN001_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein localization protein LolB"
                     /protein_id="HAY9054215.1"
                     /translation="MPLPDFRLIRLLPLAALVLTACSVTTPKGPGKSPDSPQWRQHQQ
                     DVRNLNQYQTRGAFAYISDQQKVYARFFWQQTGQDRYRLLLTNPLGSTELELNAQPGN
                     VQLVDNKGQRYTADDAEEMIGKLTGMPIPLNSLRQWILGLPGDATDYKLDDQYRLSEI
                     TYSQNGKNWKVVYGGYDTKTHPAMPANMELTDGGQRIKLKMDNWIVK"
     gene            7086..8342
                     /gene="hemA"
                     /locus_tag="JN001_003056"
     CDS             7086..8342
                     /gene="hemA"
                     /locus_tag="JN001_003056"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HAY9054216.1"
                     /translation="MTLLALGINHKTAPVSLRERVSFSPDKLDQALDSLLAQPMVQGG
                     VVLSTCNRTELYLSVEEQDNLQEALIRWLCDYHNLNEEDLRKSLYWHQDNDAVSHLMR
                     VASGLDSLVLGEPQILGQVKKAFADSQKGHMKASELERMFQKSFSVAKRVRTETDIGA
                     SAVSVAFAACTLARQIFESLSTVTVLLVGAGETIELVARHLREHKVQKMIIANRTRER
                     AQILADEVGAEVIALSEIDERLREADIIISSTASPLPIIGKGMVERALKSRRNQPMLL
                     VDIAVPRDVEPEVGKLANAYLYSVDDLQSIISHNLAQRKAAAVEAETIVAQETSEFMA
                     WLRAQSASETIREYRSQAEHVRDELTAKALAALEQGGDAQAIMQDLAWKLTNRLIHAP
                     TKSLQQAARDGDNERLNILRDSLGLE"
     gene            8384..9466
                     /gene="prfA"
                     /locus_tag="JN001_003057"
     CDS             8384..9466
                     /gene="prfA"
                     /locus_tag="JN001_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HAY9054217.1"
                     /translation="MKPSIVAKLEALHERHEEVQALLGDAQTIADQERFRALSREYAQ
                     LSDVSRCFTDWQQVQEDIETAQMMLDDPEMREMAQDELRKAKEKSEQLEQQLQVLLLP
                     KDPDDERNAFLEVRAGTGGDEAALFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYK
                     EIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELPDAELPDIN
                     PADLRIDTFRSSGAGGQHVNTTDSAIRITHLPTGIVVECQDERSQHKNKAKALSVLGA
                     RIHAAEMAKRQQAEASTRRNLLGSGDRSDRNRTYNFPQGRVTDHRINLTLYRLDEVME
                     GKLDMLIEPIIQEHQADQLAALSEQE"
     gene            9466..10299
                     /gene="prmC"
                     /locus_tag="JN001_003058"
     CDS             9466..10299
                     /gene="prmC"
                     /locus_tag="JN001_003058"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HAY9054218.1"
                     /translation="MEYQHWLREAISQLQASESPRRDAEILLEHVTGRGRTFILAFGE
                     TQLTDEQCQQLDALLTRRRDGEPIAHLTGGREFWSLPLFVSPATLIPRPDTECLVEQA
                     LARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKN
                     IHILQSDWFSALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIV
                     HIIEQSRNALVSGGFLLLEHGWQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRYY
                     Q"
     gene            10296..10688
                     /locus_tag="JN001_003059"
     CDS             10296..10688
                     /locus_tag="JN001_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SirB family protein"
                     /protein_id="HAY9054219.1"
                     /translation="MTSFSTLLSVHLISIALSVGLLTLRFWLRYQKHPQAFARWTRIV
                     PPVVDTVLLLSGIALMAKAHILPFSGQAQWLTEKLFGVIIYIVLGFIALDYRRMHSQQ
                     ARIIAFPLALVVLYIIIKLATTKVPLLG"
     gene            10692..11501
                     /locus_tag="JN001_003060"
     CDS             10692..11501
                     /locus_tag="JN001_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat-containing protein"
                     /protein_id="HAY9054220.1"
                     /translation="MRSLADFEFNKAPLCEGMILACEAIRRDFPSQDVYDELERLVSL
                     AKEEISQLLPLEEQLEKLIALFYGDWGFKASRGVYRLSDALWLDPVLKNRQGSAVSLG
                     AVLLWVANRLDLPLLPVIFPTQLILRIECPDGEIWLINPFNGESLSEHMLDVWLKGNI
                     SPSAELFYEDLDEADNIEVIRKLLDTLKASLMEENQMELALRTSEALLQFNPEDPYEI
                     RDRGLIYAQLDCEHVALNDLSYFVEQCPEDPISEMIRAQINNIAHKHIVLH"
     gene            11537..12391
                     /gene="kdsA"
                     /locus_tag="JN001_003061"
     CDS             11537..12391
                     /gene="kdsA"
                     /locus_tag="JN001_003061"
                     /EC_number="2.5.1.55"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-8-phosphooctulonate synthase"
                     /protein_id="HAY9054221.1"
                     /translation="MKQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTV
                     TQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTFGVKIITDVHEPSQA
                     QPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGN
                     EKVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRR
                     AQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
                     FEELDTSK"
BASE COUNT         3117 a         3176 c         3258 g         2967 t
ORIGIN      
        1 ggtgaaatga aaaatccacg caattgcgtg gattttatat acttttgcgc tcttcatgag
       61 atttagcgaa acctcatgag acaataaatt aattagacgt tgaaaaggaa gttcatcaca
      121 tcgccatctt tcacgatgta atctttacct tctgcacgca ttttgcctgc ttctttcgcg
      181 ccttgttcac ctttgtaagt gatgaaatct tcaaacgaga tggtttgtgc acggataaag
      241 cctttttcaa aatcagtatg gattttgccc gctgcctgcg gcgcggttgc tccaaccgga
      301 atggtccatg cacgcacttc tttcacccca gcggtgaagt aagtttgcag gttcagcagc
      361 ttataaccgg cacggatcac acggttcagg cccggctctt ccagcccaag ctcctgcata
      421 aactcgtcac gttcttcgtc gtccagttcg gcaatgtctg cttcaacagc agcacaaacc
      481 ggaaccacaa cagaaccttc tttcgccgcg atttcacgca cctggtcaag atatgggttg
      541 ttttcaaaac cgtcttcgtt gacgttggcg atgtacattg ttggtttcag cgtcaggaag
      601 ctcaggtaac gaatagccgc tttctcttca gcgcttaaat ccagcgcgcg cagcatacct
      661 gcattttcca actggggcag gcatttttcc aggaccgcca gctcagcttt cgcgtcttta
      721 tcgccacctt tggctttctt ctgtacgcga tgaatcgcac gttcgcaggt gtcgaggtct
      781 gccagcgcca gttcggtgtt gataacttca atatcgtcag ccgggttaac tttgccggaa
      841 acgtgaatga tgttgtcatt ttcaaagcag cgaacaacgt gaccgatcgc ttcggtttca
      901 cggatgttgg tcaggaactg gttacccaga ccttcgcctt tcgatgcgcc ttttaccaga
      961 ccggcgatat cgacaaattc catggtcgtg ggaagcgtac gctgcggttt tacgatttca
     1021 gccagttgat ccaggcgagg atcaggcatt ggtacgacgc ctgtgttcgg ctcaatggtg
     1081 cagaatggaa agttggccgc ttcaataccg gctttggtca gcgcgttgaa cagggtagat
     1141 ttcccgacgt tgggcaaacc gacgataccg catttgaatc ccatgattta aatcacctta
     1201 atatcttaat aatcaacctg ttattgctaa cagattgcag aaatggaaat aactttgcct
     1261 attatacacg gcactcggca aaaatgccgc agacaacgac ttattgcgct ttaaaggcgt
     1321 gcaatcggtt cgttgctttg gtcaagccat ctgtaaacca catttcagta caacgcgccg
     1381 cttcgtcaat ggcttcatca attaacttct gttcactaac aggcggtttg cctaacacaa
     1441 aaccgacaac tttattttta tcgcccggat gaccgattcc gatgcgtaaa cggtgaaagt
     1501 tagggttatt acccaattta ctgatgatgt ctttcagtcc attgtgacca ccatggccac
     1561 cgcccaattt aaatttggcg acgccaggag gcagatccag ttcgtcgtgg gccaccagaa
     1621 tttcgtccgg attaatgcgg aaaaaactgg ccatcgccgc aacggctttg ccgctgagat
     1681 tcataaatgt agtcgggact aacaggcgga catcttcgcc tccaagagtg actcgcgaag
     1741 tataaccaaa gaatttagcc tcttcgcgca gcggagcgcg caaacgctct gccagtaagt
     1801 caacgaacca ggcaccagca ttatgtcgcg ttgcggcgta ttcagcaccg gggttcgcca
     1861 ggccgacaat caatttaatc gtcacgtttt tttgtcctga gtgtgtacat aactggcgcg
     1921 tagtttactg gttgcgaccc cgcttgacaa aaaactgcgt atcaaatgca gataacgtaa
     1981 taattgcctg agtgggctat tagaaagtca aggtgttcag gcgtttattt gtaaagtttt
     2041 gttgaaataa gggttgtaat tgtgatcacg cccgcacata acccacaggg tgttgtctat
     2101 actttacaca taaggaagag gggtattccc tgttacaacc cagaaagttc cggaggtgac
     2161 atatgaaacg caaaaacgct tcgttactcg gtaacgtgct catggggttg ggtctggtgg
     2221 taatggtggt cggcgtgggg tattcaatcc tcaaccagtt accacagttt aatatgcccc
     2281 agtatttcgc acatggtgca gtgctaagta ttttcgtcgg tgccattctc tggctggcgg
     2341 gtgcccgtgt tggcgggcat gaacaggtgt gcgaccgtta ctggtgggtt cgccactatg
     2401 acaaacgttg ccgccgtagc gataatcgcc gtcatagcta acaaataatg cagtttgctg
     2461 accagtcagt ttgcgctgac tggtcaatct cgtacttata aatccgccat cgccgcgcga
     2521 cgattcggga agaacgcgag gcgtcccgag attggttgaa tgcctgcgcg agccatagtg
     2581 cgcagtggct ggaattccac gttgcacacg cgcagttcac atccttcggg cagacgcttc
     2641 acaaaacgct ggaacgcatc aagaccacca gcatcaagta ccggaacggc atcccacttc
     2701 agaatcacaa tccgtttgcc ttcaagacgt gactccaggt ccgtgaacaa gccttcagca
     2761 gcagcaaaaa acagcgggcc aataacgcgc agtaccagaa catcgtctgg aacatctacg
     2821 actaccggtg ccaggcgagt catacgtgcg atacgacgca taaacagcag cgatgccagc
     2881 acgatcccca cgctgatggc aataaccata tcaaacagca cggtcagcga catgcacagc
     2941 agcatgacaa tgatgtcatc tttcggtgca tgacgcagca agtcgaccac tttatgcgct
     3001 tcactcatgt tccacgccac catcaacagc agggctgcca tagcggaaag cggcagccag
     3061 gagagcagcg gtgccagtac cagcagggca agaataacca gaatagagtg gatcaccgct
     3121 gagatagggg aagttgcccc ggcacggacg ttagcggcag aacgcgcgat ggcagctgta
     3181 gcggtaatac caccaaagaa tggagcgata atattcccca gtccctgtcc aaccagttcg
     3241 ctgttcgcct tgtgtttcgt cccggtcata ccatccagta ccacggcgca gagcagagat
     3301 tcgattgcgc cgagcattgc cattgagaat gccgcaggca gcagtgtgcg aatagaatcc
     3361 caggttagcg tgaattctga attaggcaga tcccacggca gcaccagttg cggcagcagt
     3421 tgcggaatac cgttaccctg agaaccatcg gccaggacgt agtggaattg cgaaccgatg
     3481 gtagcaacat gtccgccgag caggttaaca atccccatca ccgcgcaacc agccagcaag
     3541 gccggaaggt gaccgggtaa acgaatgccc agacgcggcc aaaaaacaag aatacctagc
     3601 gtcacaatgc caatggcagc atcacccaca ttaatggtcg gcagcgccat aaataatgcg
     3661 ccgacttttt gtagataatg ttccgggaca tgggccattt gcagaccgag aaaatcttta
     3721 atctgcatgg taccgatggt gatcccgata cccgaggtga aacctaaggt gacggaaacc
     3781 ggaatatact caatcaggcg accaaagcgt gccagaccca tcagaatcaa aaagatcccc
     3841 gacagcaagg ccgcaaccag cagtcctgcc agtccaaact gttgcgacac gggatagata
     3901 attaccacaa atgccgcagt cggaccggaa acgctaaagc gtgacccacc cgtcagagca
     3961 atgacaatcc ccgcaacagc tgcggtatat aaaccgtact ggggtgccac accactacca
     4021 atagccaacg ccatcgccag cgggatagca ataatcccga cggttatccc ggcaatcagg
     4081 tcacgggtaa accgtgcggc agtatatttt tctttccagc aagcgtcgat cagagcgcgg
     4141 aaaggcatca catgtgagga aaatattttg ttcacaataa tgtttcatcc gtgagcgcat
     4201 catctgtcaa ctaaatggca ggtgaaggag gcataggtca tacaaatgga tattacagac
     4261 aaaaaaaccc gccgcagcgg gtctttgagc cgggttcgat tagtgttcga acatggcaga
     4321 gatcgattct tcgttgctga tacgacgaat cgcttcggcc agcatacctg acagggtcag
     4381 agtacgcacg ttcggcagtg atttgatttc atcgctcagc ggaatggtat cgcagacaac
     4441 gacttcatca attacagagt tacgcaggtt gttcgccgcg ttgccagaga agatcgggtg
     4501 agtcgcgtac gcaaatacac gtttagcacc acgttctttc agagcttcag cagctttaca
     4561 cagcgtaccg ccagtgtcga tcatatcatc gaccagtacg cagtcacgac ctgcaacgtc
     4621 accgatgata tgcatcacct gggaaacgtt cgcacgcgga cgacgtttgt cgatgattgc
     4681 catatcggta tcgttcagca gcttagcgat agcgcgggca cgcacaacgc cgccgatgtc
     4741 cggagaaacc acaattgggt tatccagatt cagctgcagc atgtcttcca gcaggatcgg
     4801 gctaccaaat acgttatcaa ccggaacgtc gaagaaaccc tgaatctgtt cagcgtgcag
     4861 atccactgtc agcacacggt caacaccgac gctggagagg aagtctgcaa ccactttcgc
     4921 agtgattggt acacgagcgg aacggacgcg acggtcctgg cgcgcatagc caaagtaggg
     4981 gataacagcg gtgatacgac ctgcggaagc acgacgcagg gcatcaacca taacgactaa
     5041 ttccatcagg ttgtcgttag taggggcaca agtggactgg atgatgaaaa tatcaccacc
     5101 gcgtacattt tcattaattt gtacgctgac ttcgccatcg ctaaagcgac ctacagcggc
     5161 gtcgccgagt gaagtgtaca ggcggttggc aatacgttgt gctagttccg gggtggcgtt
     5221 accagcaaaa agcttcatat caggcacgag aagaacctca ggcatgcgtc cattggtgga
     5281 aagaatctgc cgaaaactgt gcgggccagg catgatcctt tccaggcagt gtattaaaga
     5341 gcgcgatgca acgtctggaa caaggtgacg ttgtcaccga aactcagctt gcccggctta
     5401 aagcatggct ctgtgcaatg gggaaagatt aacgcctttc gccacaaagc cattgagcca
     5461 ttccggggct tgctctagca cctggcgggc ttcagactct gtatcaaatt cagcaaagac
     5521 acaggcccct gtcccagtca ggcgcgacgg ggcgtattct aacagccagg aaagcaccgc
     5581 atcaacctcg cgaaaacgtt ttcttgcgat aacctcgcaa tcattgctga attcacattt
     5641 tagcaacgtt tctattgacc tttttggcgt attgcgcggg agttcaggat ctttaaaaat
     5701 caccggagtc ggaatactta caccagggtg cgccaccaga taccacttct ctggcggatc
     5761 caccggcgtt agtatttcac caacgccttc ggcaaacgcg gcatgccccc gaacaaagac
     5821 aggaacatct gcgcccagcg tcagccccat ttccgccagc tcatccatgc ttagcccgca
     5881 ttgccagaga tgatttaatg ccaccaggac cgtcgcggca ttggatgaac caccgccgag
     5941 accgccgccc atcggcaaac gcttgtcaat gctgatattc gcaccgcttc ccgtcggaag
     6001 acgcccgctg tctgccgcag ttttcatcaa caatcgcgct gcgcgaacga tcaggttatc
     6061 ttcatgttcc acgccttcaa cgggcgttaa cagacgaata tccccatcgt cacgaagctc
     6121 aatgctgatg gtgtcgccgt aatcaagaaa ctgaaacagc gtttgcagcg tgtggtaacc
     6181 atccgcacgc tgaccggtaa tgtataaaaa cagattaagt tttgccggag agggccactg
     6241 tgtccgcatt atttcactat ccagttatcc atttttaact tgatgcgttg accaccgtcg
     6301 gtgagttcca tattggctgg catcgcagga tgcgttttgg tgtcataacc accataaaca
     6361 accttccagt ttttgccatt ctggctgtag gtaatttcgc tcaggcggta ctggtcgtcc
     6421 agtttgtagt cggttgcatc acccggtaaa cctaaaatcc actggcgcaa gctgttgagc
     6481 ggaattggca ttccggtcaa tttgccaatc atctcttcgg cgtcatcggc ggtataacgc
     6541 tgacctttat tgtcgactaa ctgcacgtta cccggttgag cattcagctc cagttccgtg
     6601 ctgcccaatg ggttagtgag cagcagacgg tagcgatcct ggccggtttg ctgccagaaa
     6661 aagcgggcgt acactttttg ttggtcagaa atataagcga acgcgccgcg agtctgatac
     6721 tgattaagat tgcgcacgtc ttgctgatgc tgacgccatt gtggcgaatc cgggcttttg
     6781 ccaggacctt tgggcgtggt aacggaacag gcagtgagca caagagcagc cagcggtagc
     6841 aggcggataa gacgaaaatc gggcaggggc atagtgatga caagtccttg agatacgttg
     6901 cagttataac ccttaatgct agcgttaccg tccgctatcg tctatgttca agttgtctta
     6961 attgccagaa tctaacggct ttcggcaatt actccaaaag ggggcgctct cttttattga
     7021 tcttacgcat cctgtatgat gcaagcagac taactctatc aacgttggta ttatttcccg
     7081 cagacatgac ccttttagca ctcggtatca accataaaac ggcacctgta tcgctgcgag
     7141 aacgtgtatc gttttcgccg gataagctcg atcaggcgct tgacagcctg cttgcgcagc
     7201 cgatggtgca gggcggcgtg gtgctgtcga cgtgcaaccg cacggaactt tatcttagcg
     7261 ttgaagagca ggataacctg caagaggcgt taatccgctg gctttgcgat tatcacaatc
     7321 ttaatgaaga agatctgcgt aaaagcctct actggcatca ggataacgac gcggttagcc
     7381 atttaatgcg tgttgccagc ggcctggatt cactggttct tggggagccg cagatcctcg
     7441 gtcaggttaa aaaagcgttt gccgattcgc aaaaaggtca tatgaaggcc agcgaactgg
     7501 aacgcatgtt ccagaaatct ttctctgtag cgaaacgcgt tcgcactgaa acagatatcg
     7561 gtgccagtgc tgtgtctgtc gcttttgcgg cttgtacgct ggcgcggcag atctttgaat
     7621 cgctctctac ggtcacagtg ttgctggtag gcgcgggcga aaccatcgag ctggtagcgc
     7681 gtcatctgcg cgaacataaa gtacagaaga tgattatcgc caaccgcact cgcgaacgtg
     7741 cccaaattct ggcagatgaa gttggcgcgg aagtgattgc cctgagtgag atcgacgaac
     7801 gtctgcgcga agccgatatc atcatcagtt ccaccgccag cccgttaccg attatcggga
     7861 aaggcatggt ggagcgcgca ttaaaaagtc gtcgtaacca accaatgctg ttggtggata
     7921 ttgccgttcc gcgcgatgtt gagccggaag ttggcaaact ggcgaatgct tatctttata
     7981 gtgtggacga tctgcaaagc atcatttcgc acaacctggc gcagcgtaaa gccgcagcgg
     8041 ttgaggcgga aactattgtc gctcaggaaa ccagcgaatt tatggcgtgg ctgcgagcac
     8101 aaagcgccag cgaaaccatt cgcgagtatc gcagccaggc agagcacgtt cgcgatgagt
     8161 taaccgccaa agcgttagcg gcccttgagc agggcggcga cgcgcaagcc attatgcagg
     8221 atctggcatg gaaactgact aaccgcttga tccatgcgcc aacgaaatca cttcaacagg
     8281 ccgcccgtga cggggataac gaacgcctga atattctgcg cgacagcctc gggctggagt
     8341 agcagtacat cattttcttt ttttacaggg tgcatttacg cctatgaagc cttctatcgt
     8401 tgccaaactg gaagccctgc atgaacgcca tgaagaagtt caggcgttgc tgggtgacgc
     8461 gcaaactatc gccgaccagg aacgttttcg cgcattatca cgcgaatatg cgcagttaag
     8521 tgatgtttcg cgctgtttta ccgactggca acaggttcag gaagatatcg aaaccgcaca
     8581 gatgatgctc gatgatcctg aaatgcgtga gatggcgcag gatgaactgc gcaaagctaa
     8641 agaaaaaagc gagcaactgg aacagcaatt acaggttctg ttactgccaa aagatcctga
     8701 tgacgaacgt aacgccttcc tcgaagtccg agccggaacc ggcggcgacg aagcggcgct
     8761 gttcgcaggc gatctgttcc gtatgtacag ccgttacgcc gaagcccgcc gctggcgggt
     8821 agaaatcatg agcgccagcg agggtgaaca tggtggttat aaagagatca tcgccaaaat
     8881 tagcggtgat ggtgtgtatg gtcgtctgaa atttgaatct ggcggtcatc gcgtgcagcg
     8941 tgttcctgct acggaatcgc agggtcgtat tcatacttct gcttgtaccg ttgcggtaat
     9001 gccagaactg cctgacgcag aactgccgga catcaaccca gcagatttac gcattgatac
     9061 tttccgctcg tcaggggcgg gtggtcagca cgttaacacc accgattcgg caattcgtat
     9121 tactcacttg ccgaccggga ttgttgttga atgtcaggat gaacgttcac aacataaaaa
     9181 caaagcgaag gcgctttcag tgctcggtgc tcgcatccac gctgctgaaa tggcaaaacg
     9241 ccaacaggcc gaagcgtcta cccgtcgtaa cctgctgggg agtggcgatc gcagcgaccg
     9301 taaccgtact tacaatttcc cgcaggggcg cgttaccgat caccgcatca acctgacgct
     9361 ctaccgcctg gatgaagtga tggaaggtaa gctggatatg ctgattgaac cgattatcca
     9421 ggaacatcag gccgaccaac tggcggcgtt gtccgagcag gaataatgga atatcaacac
     9481 tggttacgtg aagcaataag ccaacttcag gcgagcgaaa gcccgcggcg tgatgctgaa
     9541 atcctgctgg agcatgttac cggcagaggg cgtactttta ttctcgcctt tggtgaaacg
     9601 cagctgactg acgaacaatg tcagcaactt gatgcgctac tgacacgtcg tcgcgatggt
     9661 gaacccattg ctcatttaac cggggggcga gaattctggt cgttgccgtt atttgtttcg
     9721 ccagcgacct taattccgcg cccggatacg gagtgtctgg tggagcaggc actggcgcgg
     9781 ttgcctgaac aaccttgccg tattcttgat ctcgggacgg gtaccggggc gattgcgctt
     9841 gcgctggcta gcgagcgccc ggactgcgaa attatcgctg tagatcgtat gcctgatgct
     9901 gtctccctgg cacaacgtaa tgcccagcat ctggcgatca aaaatatcca cattctgcaa
     9961 agcgactggt ttagcgcgct agccgggcag cagtttgcga tgattgtcag caatccgccg
    10021 tatattgacg agcaggaccc acatcttcaa caaggcgatg tccgctttga gccgctcact
    10081 gcgctggttg cggcagacag tggaatggca gacatcgtgc atatcatcga acagtcgcgt
    10141 aacgcgctgg tatccggcgg ctttctgctt ctggaacatg gctggcagca gggcgaagcg
    10201 gtgcgacaag catttatcct cgcggggtat catgacgtcg aaacctgccg tgactatggt
    10261 gataacgagc gcgtaacgct cggccgctat tatcaatgac aagtttttct acactgctta
    10321 gtgttcatct tattagtatc gcgctttctg ttgggctatt aaccttacgt ttctggctac
    10381 gttatcagaa gcatccacag gcatttgctc gctggacgcg cattgtgccg ccggttgtcg
    10441 atacggtgtt attgttaagc ggcattgcgt tgatggctaa agcgcacatc ctgccatttt
    10501 ccgggcaggc acagtggctg actgaaaagc tgtttggagt tatcatttat atcgttttgg
    10561 gttttattgc actcgattat cgtcgtatgc acagtcagca ggcgcgcatt attgccttcc
    10621 cgctggcgtt ggtggtgctg tacatcatca ttaaactcgc caccacaaaa gtaccgttac
    10681 tggggtaagt catgagatcg ttagctgatt tcgaatttaa taaagcgcca ttgtgcgaag
    10741 gcatgatcct ggcttgcgaa gcaatccgcc gcgattttcc ctcgcaagat gtttacgacg
    10801 aactggagcg tctcgttagt ctggcgaagg aagaaatcag ccagcttctg cctttagaag
    10861 agcagctgga aaaactgatc gcgctgtttt acggcgactg gggatttaaa gcctcacgcg
    10921 gcgtttatcg tctttccgat gcattatggc tggacccggt gttaaagaat cgacagggca
    10981 gtgcggtatc attaggtgcg gttttattat gggtcgcgaa tcgtctcgat ttgccgctgc
    11041 tgccggtgat tttccctacg cagctgatat tgcgcattga atgtccggat ggcgaaattt
    11101 ggctgattaa tccttttaac ggtgaatcgt taagcgaaca tatgctggac gtatggttaa
    11161 agggaaatat cagcccgtcg gcggaactgt tttatgaaga ccttgatgaa gctgataaca
    11221 ttgaggtaat ccgcaaattg ctggatacac tcaaagcctc gttgatggaa gaaaatcaga
    11281 tggagctggc gttacgcacc agcgaagctt tattacaatt caaccctgaa gatccctatg
    11341 aaattcgcga tcgcgggttg atttatgcgc aactggattg cgaacacgtt gcgttgaacg
    11401 atttaagtta tttcgttgaa cagtgtccgg aagacccgat cagcgaaatg atccgtgcgc
    11461 aaataaataa catcgcgcat aaacatattg tgctgcatta attaatcgac attttactca
    11521 agattaaggc gatcctatga aacaaaaagt ggttagcatt ggcgacatca acgtagcaaa
    11581 tgacctgccg ttcgtactgt ttggcggtat gaacgtgctg gaatctcgcg atctggcgat
    11641 gcgcatttgc gagcactacg taactgtgac ccagaaactg ggtatccctt acgtgttcaa
    11701 agcctctttt gacaaagcca accgctcctc catccactct tatcgtggac cgggcctgga
    11761 agaagggatg aaaatcttcc aagagttgaa gcagactttt ggcgtgaaaa ttatcaccga
    11821 cgttcacgaa ccaagtcagg cacagcccgt tgctgatgtc gtggatgtga ttcagttgcc
    11881 ggcgtttctt gctcgccaga ctgacctggt tgaagccatg gcgaaaaccg gtgcggtaat
    11941 taacgtcaag aaaccacagt ttgtcagccc gggacagatg ggtaatatcg ttgataaatt
    12001 caaagaaggc ggcaacgaaa aagtgattct ttgcgatcgt ggtgctaact tcggctatga
    12061 caacctggtt gtcgatatgc tgggcttcag cattatgaag aaagtgtctg gtaactcgcc
    12121 ggtgattttc gacgtgaccc acgcactgca atgccgcgat ccgtttggcg cagcttccgg
    12181 tggtcgtcgt gctcaggtgg ctgagctggc acgagccggt atggcggtag gtctggcggg
    12241 gctgtttatt gaagcgcatc cggatccgga acatgcgaaa tgtgatggtc catccgcgct
    12301 gccgctggct aaactggaac cgttcctcaa gcagatgaaa gcgattgatg atctggtgaa
    12361 aggtttcgaa gaactggata ccagcaagta atcttttttg cttgaaaaat aaagtcttag
    12421 cgttctgcgt taagactttt ttcatgggtg ccagatacaa aaaaggccgc aggctgttac
    12481 ccctgcggcc ggtttcgggc gcatattgcc atcacggc
//
LOCUS       DADMJE010000126        12054 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.127, whole genome shotgun sequence.
ACCESSION   DADMJE010000126 DADMJE010000000
VERSION     DADMJE010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12054)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12054)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12054
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.127"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            16..192
                     /locus_tag="JN001_003062"
     CDS             16..192
                     /locus_tag="JN001_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001322497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HAY9054222.1"
                     /translation="MSALFFFNAVCIVSDNLLIIESFGEMAYNISYLTRVPGTNTLLA
                     CCCLLRPEEVNSEY"
     gene            182..355
                     /locus_tag="JN001_003063"
     CDS             182..355
                     /locus_tag="JN001_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="addiction module toxin, GnsA/GnsB family"
                     /protein_id="HAY9054223.1"
                     /translation="MNIEELKKQAETEIADFIAQKIAELNKNTGKEVSEIRFTAREKM
                     TGLESYDVKIKIM"
     gene            complement(404..1476)
                     /locus_tag="JN001_003064"
                     /pseudo
     CDS             complement(404..1476)
                     /locus_tag="JN001_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415512.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S binding protein"
     gene            complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JN001_003065"
     CDS             complement(1548..4292)
                     /gene="torS"
                     /locus_tag="JN001_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415513.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system sensor histidine
                     kinase/response regulator TorS"
                     /protein_id="HAY9054224.1"
                     /translation="MNLTLTRRLWMGFALMALLTLTSTLVGWYNLRFISQVEKDNTQA
                     LIPTMNMARQLSEASAWELFAAQNLTSADNEKMWQAQGRMLTAQSLKINALLQALREQ
                     GFDTTAIEQQEQEISRSLRQQGELVGRRLQLRQQQQQLSQQIVAAADEIARLAQGQAN
                     NATTSAGATQAGIYDLIEQDQRQAAESALDRLIDIDLEYVNQMNELRLSALRVQQMVM
                     NLGLEQIQKNAPMLEKQLNNAVKILQRRQIRIEDPGVRAQVATTLTTVSQYSDLLALY
                     QQDSEISNHLQTLAQNNIAQFAQFSSEVSQLVDTIELRNQHGLAHLEKASARGQYSLL
                     LLGMVSLCALILILWRVVYRSVTRPLAEQTQALQRLLDGDIDSPFPETAGVRELDTIG
                     RLMDAFRSTVHALNRHREQLAAQVKARTAELQELVIEHRQARAEAEKASQAKSAFLAA
                     MSHEIRTPLYGILGTAQLLADNPALNAQRDDLRAITDSGESLLTILNDILDYSAIEAG
                     GKNVSVSDEPFEPRPLLESTLQLMSGRVKGRPIRLATAIADDVPTALMGDPRRIRQVI
                     TNLLSNALRFTDEGQIVLRSRTDGEQWLVEVEDSGCGIDPAKLAEIFQPFVQVSGKRG
                     GTGLGLTISSRLAQAMGGELSATSTPEVGSCFCLRLPLRVATAPVPKTVNQAVRLDGL
                     RLLLIEDNPLTQRITVEMLNTSGAQVVAVGNAAQALETLQNSEPFAAALVDFDLPDVD
                     GITLARQLAQQYPSLVLIGFSAHVIDETLRQRTSSLFRGIIPKPVPREVLGQLLAHYL
                     QLQVNNDQSLDVSQLNEDAQLMGTEKIHEWLVLFTQHALPLLDEIDIARASQDSEKIK
                     RAAHQLKSSCSSLGMRIASQLCAQLEQQPLSAPLPHEEITRSVAALEAWLHKKDLNAI
                     "
     gene            4375..5364
                     /gene="torT"
                     /locus_tag="JN001_003066"
     CDS             4375..5364
                     /gene="torT"
                     /locus_tag="JN001_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HAY9054225.1"
                     /translation="MRVLLFLLLSLFMLSAFSADNLLRWHDAQHYTVQASTPLKAKRA
                     WKLCALYPSLKDSYWLSLNYGMQEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSF
                     PDLQKQVANLPVIELVNALDDPLVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMP
                     GPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAG
                     TAIAAEAAMGEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMIWQGELAVEQA
                     IRQLQGQSVSDNVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK"
     gene            complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JN001_003067"
     CDS             complement(5337..6029)
                     /gene="torR"
                     /locus_tag="JN001_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator TorR"
                     /protein_id="HAY9054226.1"
                     /translation="MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQN
                     QPVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTK
                     PLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTR
                     AEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQ
                     HGECYFLAADVC"
     gene            6149..7321
                     /gene="torC"
                     /locus_tag="JN001_003068"
     CDS             6149..7321
                     /gene="torC"
                     /locus_tag="JN001_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentaheme c-type cytochrome TorC"
                     /protein_id="HAY9054227.1"
                     /translation="MRKLWNALRRPSARWSVLALVAIGIVIGIALIVLPHVGIKVTST
                     TEFCVSCHSMQPVYEEYKQSVHFQNASGVRAECHDCHIPPDIPGMVKRKLEASNDIYQ
                     TFIAHSIDTPEKFEAKRAELAEREWARMKENNSATCRSCHNYDAMDHAKQHPEAARQM
                     KVAAKDNQSCIDCHKGIAHQLPDMSSGFRKQFDELRASANDSGDTLYSIDIKPIYAAK
                     GDKEASGSLLPASEVKVLKRDGDWLQIEITGWTESAGRQRVLTQFPGKRIFVASIRGD
                     VQQQVKTLEKTTVADTNTEWSKLQATAWMKKGDMVNDIKPIWAYADSLYNGTCNQCHG
                     APEISHFDANGWIGTLNGMIGFTSLDKREERTLLKYLQMNASDIAGKAHGDKKEEK"
     gene            7321..9893
                     /gene="torA"
                     /locus_tag="JN001_003069"
                     /pseudo
     CDS             7321..9893
                     /gene="torA"
                     /locus_tag="JN001_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415517.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trimethylamine-N-oxide reductase TorA"
     gene            9890..10489
                     /gene="torD"
                     /locus_tag="JN001_003070"
     CDS             9890..10489
                     /gene="torD"
                     /locus_tag="JN001_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD"
                     /protein_id="HAY9054228.1"
                     /translation="MTTLTAQQIACVYAWLAQLFSRELDDEQLTQIASAQMAEWFSLL
                     KSEPPLAAAVNELENCIATLTVRDDARLELAADFCGLFLMTDKQAALPYASAYKQDEQ
                     EIKRLLVEAGMETSGNFNEPADHLAIYLELLSHLHFSLGEGTVPARRIDSLRQKTLTA
                     LWQWLPEFAARCHQYDSFGFYAALSQLLLVLVECDHQNK"
     gene            complement(10582..10887)
                     /gene="cbpM"
                     /locus_tag="JN001_003071"
     CDS             complement(10582..10887)
                     /gene="cbpM"
                     /locus_tag="JN001_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperone modulator CbpM"
                     /protein_id="HAY9054229.1"
                     /translation="MANVTVTFTITEFCLHTGISEEELNEIVGLGVVEPREIQETTWV
                     FDDHAAIVVQRAVRLRHELALDWPGIAVALTLMDDIAHLKQENRLLRQRLSRFVAHP"
     gene            complement(10887..11807)
                     /gene="cbpA"
                     /locus_tag="JN001_003072"
     CDS             complement(10887..11807)
                     /gene="cbpA"
                     /locus_tag="JN001_003072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curved DNA-binding protein"
                     /protein_id="HAY9054230.1"
                     /translation="MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEA
                     RFKEVAEAWEVLSDEQRRAEYDQMWQHRNDPQFNRQFHHGDGQSFNAEDFDDIFSSIF
                     GQHARQSRQRPAARGHDIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTL
                     NVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGQDLEIVVPVS
                     PWEAALGAKVTVPTLKESILLTIPPGSQAGQRLRVKGKGLVSKKQTGDLYAVLKIVMP
                     PKPDENTAALWQQLADAQSSFDPRKDWGKA"
BASE COUNT         2894 a         3094 c         3191 g         2875 t
ORIGIN      
        1 cgtggagcct tttttatatc tgccttattt ttcttcaacg ctgtatgtat agtaagcgat
       61 aacctgttga ttattgaatc tttcggggag atggcttata acatttctta cctgaccagg
      121 gtaccgggaa ccaacacctt actggcgtgt tgctgtcttt taagaccaga agaggttaac
      181 agtgaatatt gaagagttaa aaaaacaagc cgaaacggaa atcgccgact ttatcgcgca
      241 aaaaatcgcc gagctgaaca agaatacagg gaaagaagtc tctgaaattc gcttcaccgc
      301 acgagaaaaa atgaccgggc ttgaaagtta tgatgtcaaa atcaaaataa tgtgattttg
      361 tgaacatcac cccgtgcgag gtgatgttcc gcttgttgct aatttagtga tcaatcattg
      421 gcgcttgtgg aattaagcgt cggtacaatt cctccggcac cgggctttgc catactcccg
      481 catacattgc gtaaccaatc accgcgaaca taatccccag aaccagtagc gtcattaacc
      541 agccagacaa cgcaaaagct tttttatttg ccgcaggttt ttgcagtgaa aaggtcaatg
      601 ttgaggctac cggacatgac tctacgcaag tcatacagcc ggtacattcc actgttcgta
      661 cctgaattaa tttatctacc gggatccgtg atgggcaatt ttttgcgcat ttgccacagc
      721 cgatacaact ttcggcattg cgacgaatct taaacggcga taatagcgaa accacgccca
      781 tcagcgcgcc atatgggcaa agataacgac accaggcatg gcgaataaac aggctggcaa
      841 tcagcaaaac ggtcacgctg attaatgtcg cggtccccat atgacgaaag aaatcgagca
      901 tttttacgtc catcaccacg ctgtagggcg acaacataaa atagtgaatc gcctgagcgg
      961 gcatcaataa cgcgatatag agaaaaaaac tcaacagcaa atacttcacg ccgcgcagag
     1021 gaatatccag ccagcgggga aggacacatt gccgaccaaa cagtttgtta ccgagatcgc
     1081 cgattaattc agaaagcgta ccaaccgggc ataaccatga gcaaaaggcc tttttgagta
     1141 atagactgat gacgataaaa gcgaccaata acagcatcgc ggagcgtgga cggacggtaa
     1201 ctgacctgtt gtaaggctat atttcagatt catcagaccg gcaatcggta gccagccttc
     1261 gatacctccc ggtctggcga caaatgtcgt gctacttgcc gtttcgtaat agcgcaccca
     1321 ataccagaac gtgatggcaa tataaatatt cattgccaac agtaataatt gcgtcgcttt
     1381 acgccaggtc gtggcattgc gccagtcatt ccacggtaat ttgccgcccg tcgtgcctgg
     1441 ccgccgctgc cagcgggttc tttttttctc tgccatgatt ttgtcagtcc gttaagttgc
     1501 ataccaaatg ccactatttt agttgttctt aactggctga tattgattca aatcgcgttc
     1561 aggtctttct tatgcaacca tgcttccaga gcggcaacac tgcgtgtaat ttcttcgtgt
     1621 ggaagggggg cagataatgg ctgctgctcc agttgtgcgc atagctggct ggcgatacgc
     1681 attcccaaac tcgagcaact gctttttagc tgatgcgcgg cacgctttat tttctcgcta
     1741 tcctgactgg cgcgggcaat gtcgatttca tcgagaagcg gcagggcatg ttgtgtaaat
     1801 aataccagcc attcgtggat cttctccgtc cccattaact gagcatcttc attgagttgc
     1861 gatacatcca gcgattgatc gttattgact tgcagttgga gatagtgcgc cagtaactga
     1921 ccgagcactt cacgcggcac cggtttaggg ataatcccgc ggaataatga actggtacgc
     1981 tggcgcagcg tttcgtcaat gacatgggcg ctaaagccaa tcaaaaccag cgacggatat
     2041 tgctgtgcca gttgtcgggc aagcgtaatg ccgtcgacat ccggcagatc aaaatccacc
     2101 agtgcggcag caaacggttc gctattttgc agtgtctcta aagcctgcgc ggcattgcca
     2161 acagcaacaa cctgcgcacc actggtgttc agcatctcaa cggtaattcg ctgggttagc
     2221 gggttatctt caattaacag caaacgtaaa ccgtcaagac gcaccgcctg attgactgtt
     2281 tttggcacgg gtgccgtggc aacacgtaac ggcaagcgta aacaaaaaca gcttccaacc
     2341 tccggcgtgc tggtggcgct cagttcgccg cccatcgcct gggccagacg gctactgata
     2401 gtcagtccca gcccggtgcc gccgcgtttg ccgcttacct gcacaaatgg ctggaagatt
     2461 tctgccagtt tcgcgggatc aataccgcag ccgctgtctt ccacttcgac cagccattgc
     2521 tcgccatcag tgcggctacg taaaacgatc tgcccttcgt cagtaaaacg cagggcgttg
     2581 ctcaacaggt tggttataac ctgacgaata cgtcgcggat cgcccattaa cgcggtcggt
     2641 acatcgtcgg caattgctgt tgccaggcga atcgggcgac ctttcacccg tccgctcatt
     2701 aattgcaggg tactttccag cagcgggcgc ggttcaaagg gctcatcgct gaccgaaaca
     2761 ttcttgccac ctgcttcgat agccgaataa tcgagaatat cgttgaggat ggtcagcaac
     2821 gattcgccag agtcggtaat cgcccgcaaa tcatcacgct gggcgttaag tgcggggtta
     2881 tctgccagca gttgagcagt gccgagaata ccgtacagcg gtgtgcggat ctcatggctc
     2941 atcgccgcca gaaaggccga ttttgcctgg ctggcttttt ctgcttccgc ccgtgcctgt
     3001 cggtgttcta tcaccagttc ctgcaattca gctgtacgcg ctttgacctg cgccgccagc
     3061 tgttcacggt ggcgattcag tgcatgaaca gtgctgcgaa acgcatccat cagccgcccg
     3121 atggtatcca gctcccgtac gccagcggtt tccgggaaag gggagtcaat atcaccgtcc
     3181 agcagccgtt gcagcgcctg cgtttgttcg gcaagtggac gcgtgactga gcgataaacc
     3241 acgcgccaaa ggatcagaat cagtgcgcaa agtgaaacca tccccagcaa taacaggctg
     3301 tattgcccgc gtgcactggc tttttccaga tgcgccagtc cgtgctgatt acgcagctca
     3361 atggtgtcga ccagctgact gacttcgcta ctaaactgcg cgaactgggc gatgttattt
     3421 tgtgcgagag tttgtaggtg attgctgatt tcactgtcct gctgatacag cgccagcaaa
     3481 tcgctatatt ggctaacggt agttaacgtt gttgcgacct gcgcacgaac acccggatct
     3541 tcaatgcgta tttgccgacg ttgcagaatt ttcaccgcat tattgagctg cttttccagc
     3601 attggtgcat ttttctggat ctgctccagc cccagattca tcaccatttg ctgcacccgc
     3661 agagcgctaa ggcgcagttc attcatctgg ttaacatact caagatcgat atcaatcagc
     3721 cgatcgagtg cactttcagc agcctgacgc tgatcttgtt cgatcaaatc gtaaatcccg
     3781 gcctgggtcg ctccagcgga agttgtcgca ttattcgcct gaccttgcgc caggcgtgcg
     3841 atctcatcgg cggcagcgac tatctgctga ctgagttgct gttgttgctg gcgtagttgc
     3901 agacgccgcc ccaccagttc cccttgctga cgtaacgaac gggagatctc ctgctcctgt
     3961 tgttcaatag cggtggtatc aaaaccttgt tcccgtaacg cttgcagcaa cgcattaatc
     4021 ttcaggcttt gtgcggtgag cattcgcccc tgcgcctgcc acatcttttc gttatcggca
     4081 ctggtcaggt tctgcgcggc gaaaagttcc caggcgctgg cttcgctcaa ctggcgcgcc
     4141 atattcatgg taggaatcaa tgcctgagtg ttgtcttttt ccacctggct gataaagcgc
     4201 aggttgtacc atcccaccag ggtactggtc agggttaaca gcgccatcag ggcaaagccc
     4261 atccagagtc ttcgggtcag ggttaaattc acggtcggtg cactttaggt gaaaaaggtt
     4321 gagtcgcaaa gcagaatgca tctagcataa agccttatta ttgattaggc tatcatgcgc
     4381 gtactgctat ttttacttct ttcccttttc atgttatcgg cattttcggc tgataacctg
     4441 ttgcgctggc atgatgcgca gcattacacg gtgcaagcct ctacgccgct taaagccaaa
     4501 cgcgcatgga aactgtgcgc gctttatccc agcctgaaag attcatactg gttatcgttg
     4561 aactatggta tgcaggaggc aggcggctac agccagttgg ctacccagca agcacaaatc
     4621 gaccagtgta aacagtgggg cgcagaggcc attttgctcg gtagtagcac tacgtcattt
     4681 cccgacctgc aaaagcaggt agcaaatctg ccggtgatcg aactggtaaa tgctcttgat
     4741 gatcccctgg tgaaaagccg cgttggtgta ccctggtttc agatgggcta tcaacctggg
     4801 cgatatttgg tgcaatgggc gcacggtaaa ccactgaacg tgctgttgat gcccggaccc
     4861 gataatgccg ggggcagtaa agagatggtc gagggttttc gcgcagccat tgccggaagc
     4921 ccggtgcgta ttgttgatat tgcgcttggt gataacgata ttgaaatcca gcgtaacctg
     4981 ttgcaggaga tgctggaacg ccacccagaa atcgacgtcg ttgccggaac ggccattgcg
     5041 gcagaggcgg caatgggtga agggcgtaac ctgaaaacgc cgcttaccgt ggtgtcgttt
     5101 tatctttcac atcaggtgta tcgcgggctg aagcggggaa gagtgattat ggctgccagc
     5161 gatcaaatga tctggcaggg ggaactggcg gttgagcagg ccatcaggca attacagggg
     5221 caatcggtgt ctgataatgt cagcccaccg attttagttc tgacgccgaa aaatgccgac
     5281 cgtgaacata ttcgccgctc gctgtcacca gggggatttc gtccggtcta tttttatcag
     5341 cacacatcag cggctaagaa ataacattca ccatgttgcg tcaccagtaa atccgcgctg
     5401 agtttatgac gtaaacgacg aattaacaca tcgacggtgc gcaggtcagg gttttccacc
     5461 cgacgcgcag aaagcatacg tagcagacgt tcacggctga gaatttcgcc cggattcgtc
     5521 acaaatgcca ccaacatttc atactctgcg cgggtcagtt taatcggctc gccatcccgc
     5581 tccagcgtat ggcgcgacac attcaggcaa taaccggcaa agcgatagca gttgtcctga
     5641 gtgtgcggtt gagcttgtcg cgcgaggtcg attcgccaga gcagattttt cacccgtact
     5701 accagttcgc gcagttccag cggtttggtg acgtaatcgt ctgcgcccat ttccagccca
     5761 acaatacggt caatccgatc gctgcgtccg gtaaccagaa taatccccac cgttgagcgt
     5821 tctcgcaggg cgcgggttaa catcaggcca ttttcatcgg gtaagttgat atccagcaga
     5881 attaaatcta ccggctgatt ctgcataatt tcccgcagcc cggcaccgct cgctgtaacg
     5941 gaaacggtat acccctcctg agtgaagtaa gattgtaatc gcgcctgggt aaccggctca
     6001 tcttcaacaa taacaatgtg atgtggcatc agagggtttt actcattctg ttcatattct
     6061 gccgtaagcc gttcatcctg accagtgccg ctgttcatat ttgctcatta agatcgcttc
     6121 actaaaccat aattttacag gggctattat gcggaaactc tggaacgcgc tacgccgacc
     6181 cagtgctcgt tggtcggtac tggcgctggt cgcaattggg attgtgattg gcattgcgct
     6241 gattgtattg ccacacgttg ggatcaaagt caccagcaca accgaatttt gtgtcagttg
     6301 ccacagtatg caaccggtgt atgaagaata taaacagtcg gtgcatttcc agaacgcctc
     6361 cggcgtgcga gctgaatgcc atgactgtca tatcccgccg gatattccag gcatggtgaa
     6421 gcgcaaactg gaagcgagca atgatatcta ccagaccttt attgctcact ccattgatac
     6481 acctgaaaaa ttcgaagcca aacgcgcgga acttgccgag cgtgaatggg cgcgaatgaa
     6541 agaaaacaac tcggcaacct gccgctcctg ccataactac gatgcgatgg atcatgcgaa
     6601 gcagcatcct gaagcggcac gtcagatgaa ggtggcagcg aaagataatc aatcctgcat
     6661 cgactgtcat aaaggtattg cccaccagtt accggatatg agtagcggct tccgtaagca
     6721 gttcgatgag ctgcgcgcca gtgctaatga cagtggtgac acgctgtact ctattgatat
     6781 taagccaatt tatgcggcga aaggcgataa agaagcctct ggttctctgc tgcctgcttc
     6841 ggaagtgaaa gtccttaaac gtgacggcga ctggctgcaa attgaaatta ccggctggac
     6901 ggaaagcgcc ggacgtcagc gtgtactcac ccaattccca ggtaaacgca tctttgttgc
     6961 ctcgattcgt ggtgatgtgc agcagcaggt aaaaacgctg gagaaaacca ccgttgccga
     7021 caccaatacc gagtggagca agttgcaggc cactgcgtgg atgaagaaag gtgatatggt
     7081 gaacgatatc aaaccgatct gggcttatgc ggattcgttg tacaacggca cctgtaacca
     7141 gtgccacggc gcaccggaaa tctctcactt tgatgctaac ggctggattg gcacgctcaa
     7201 cggcatgatt ggctttacca gtctcgataa acgtgaagaa cgcaccttgt tgaaatatct
     7261 gcaaatgaat gcgtctgaca tcgcaggtaa ggctcacggc gataagaagg aagaaaaata
     7321 atgaacaata acgatctctt tcaggcatca cgtcggcgtt ttctggcaca actcggcggc
     7381 ttaacagtcg ccgggatgct ggggccgtca ttgttaacgc cgcgcagtgc gactgcggcg
     7441 caagcggcgg atgtcatctc gaaagagggc attcttaccg ggtcgcactg gggggctatc
     7501 cgcgcgacgg tgaaggatgg tcgctttgtg gcggcaaaac cgttcgaact ggataaatat
     7561 ccgtcgaaaa tgattgccgg attgccggat tgccggattg ccggattgcc ggattgccgg
     7621 atcacgtaca caacgcggcg cgtattcgtt atccgatggt acgcgtggac tggctgcgta
     7681 agcgccatct cagcgatacc tcccagcgcg gtgataaccg ttttgtgcgc gtgagctggg
     7741 atgaagccct cgacatgttc tatgaagaac tggaacgcgt gcagaaaact cacgggccga
     7801 gtgccttgct gaccgccagt ggttggcaat cgacggggat gttccataac gcttcgggga
     7861 tgctggcgaa agctattgcc ttgcatggta atagcgttgg tacgggcgga gattactcta
     7921 ccggtgctgc gcaggtgatc ctgccgcgcg tagtcggttc gatggaagtg tatgaacagc
     7981 aaacctcctg gccgctggta ttgcagaaca gcaaaaccat tatgctgtgg ggctccgatt
     8041 tgctgaaaaa ccagcaagcg aactggtggt gcccggatca cgatgtttat gaatattacg
     8101 agcaactaaa agcgaaagtc gccgccggtg aaattgaggt catcagcatc gatccggttg
     8161 tcacatccac ccatgagtat ctggggcgcg agcatgtgaa gcacattgcg gttaacccgc
     8221 aaactgacgt gccgctgcaa ctggcgctgg cgtatacgct gtacagtgaa aacctgtacg
     8281 acaaaaactt cctcgctaac tactgtgtag gttttgagca gttcctgccg tatctgctgg
     8341 gtgagaaaga cggtcagccg aaagatgccg catgggctga aaaactgacc ggcattgatg
     8401 ccgaaaccat tcgtgggctg gcgcggcaga tggcggcgaa cagaacgcaa attattgctg
     8461 gctggtgcgt gcagcgtatg cagcacggtg aacagtgggc gtggatgatt gtggttctgg
     8521 cggcgatgct ggggcaaatt ggcctgccag gtggtggttt tggttttggc tggcactaca
     8581 acggcgcagg cacgccgggg cgtaaaggcg ttattctgag tggtttctcc ggctctacgt
     8641 cgattccgcc tgttcacgac aacagtgact acaaaggcta cagcagcacc attccgattg
     8701 cccgttttat cgatgcgatc ctcgaaccgg ggaaagtgat caactggaac ggtaaatcgg
     8761 taaaactgcc gccactgaaa atgtgtattt ttgccggaac taacccattc catcgccatc
     8821 agcagatcaa ccgcattatt taaggctggc gcaagctgga aacggttatc gccatagata
     8881 accagtggac ctcaacctgc cgctttgccg atatcgtact gcctgcgacc acgcagtttg
     8941 agcgtaacga tctcgaccag tacggcaacc actccaaccg tggcattatc gccatgaaac
     9001 aggtggtgcc gccgcagttc gaggcgcgca acgactttga tattttccgc gagctgtgcc
     9061 gtcgctttaa tcgcgaagaa gcctttaccg aagggctgga cgaaatgggc tggctgaaac
     9121 gcatctggca ggaaggtgta caacaaggca aaggacgcgg cgttcatctg ccagcgtttg
     9181 atgacttctg gaataacaaa gagtacgtcg agtttgacca tccgcagatg tttgttcgcc
     9241 accaggcatt ccgcgaagat ccggatctcg aaccgctggg cacgccgagt ggcctgattg
     9301 agatctactc gaaaaccatc gccgatatga actacgacga ttgtcagggg catccgatgt
     9361 ggtttgagaa aatcgaacgc tcccacggtg ggcccggctc gcagaagtat ccgttgcatc
     9421 tgcaatctgt gcatccggat ttccgacttc actcgcagtt atgtgagtcg gaaactctgc
     9481 gtcagcaata tacggtagcg ggtaaagagc cagtattcat taacccgcag gatgccagcg
     9541 cgcgcggtat tcgtaacggt gatgtggtac gcgtctttaa cgctcgcggt caggtgttgg
     9601 caggggcagt agtttctgac cgctatgcac ccggcgtggc acgaattcac gaaggggcat
     9661 ggtacgatcc agataaaggc ggcgagcctg gtgcgctgtg caaatacggt aaccccaacg
     9721 tgctgaccat cgacatcggt acttcgcagc tggcgcaggc gaccagtgcg cacactacgc
     9781 tggtggaaat tgagaagtac aatggagcag tggagcaggt gacggcgttt aacggccctg
     9841 tggagatagt ggcgcagtgc gaatatgttc ccgcgtcgca ggtgaaatca tgaccacgct
     9901 gacagcacaa cagattgcct gtgtttacgc ctggctggcg cagttgttct cccgtgaact
     9961 ggacgatgaa caactgacgc aaatcgccag tgcgcagatg gcggaatggt tttcgttgct
    10021 gaaaagcgaa ccgccgctgg ctgcggcggt gaatgagctg gaaaactgta ttgccacgct
    10081 gacagtacgt gacgatgccc gtctggaact ggccgctgac ttttgcggcc tgtttttgat
    10141 gactgataag caggcggcgc tgccgtatgc atcggcctac aaacaggacg agcaagagat
    10201 taaacgcttg ttagttgagg cagggatgga aaccagcggc aatttcaacg aaccggcaga
    10261 ccatctggcg atctatctcg agttgttgag tcatctgcat ttttcgctgg gagaggggac
    10321 cgttcctgcg cgaagaatcg acagtttgcg gcaaaaaaca ctgacggcgc tgtggcaatg
    10381 gttaccagag tttgctgcgc gttgccatca gtatgacagc tttggttttt acgcggcact
    10441 aagccagtta ttgctggtgt tagtggagtg cgaccaccaa aacaaataac gtcgtttatg
    10501 cgcctgaaaa gacgcgttta gcgtcgcatc aggcattatg gcgcagttgc cggatgcgtc
    10561 atcacatccg gcaaacacac atcacggatg agctacaaac cgggaaagcc gctggcgtag
    10621 caggcggttt tcctgcttca ggtgtgcaat atcatccatt aacgtcagcg ccaccgcgat
    10681 ccccggccag tccagagcca gttcatgacg caggcgtacc gcgcgttgca ccacaatggc
    10741 ggcatggtcg tcaaataccc aggttgtttc ctggatctca cgcggttcaa ccacccccaa
    10801 accgacaatt tcattcaact cctcttcaga gatgccggta tgcaggcaaa attcggtaat
    10861 agtaaaagtc accgtaacat tagccatcat gctttccccc aatctttacg tggatcaaaa
    10921 gacgactggg cgtctgccag ttgctgccac agcgcggcag tgttttcatc cggtttcggc
    10981 ggcatcacga ttttcagtac cgcatacaga tcgccggtct gttttttgct caccagacct
    11041 ttgcctttaa cgcgcaatcg ttgcccggcc tggctgcctg gcgggatagt cagcaaaatg
    11101 ctttctttca gtgttggaac ggtgacttta gcacccagcg ccgcttccca cgggctaacc
    11161 ggcaccacaa tttccagatc ctggccgaca atatcgaaca gcggatgtgg cgcaatatga
    11221 atcaccagcc acaaatcgcc atttggacca ccgttttcgc ccggcgtccc ctggcctttc
    11281 agacggatgc gttgaccatt gccgacgccc gccgggatct tcacattcag cgttttcggg
    11341 atttcctgtt cgatcatgcc aaaggcgtta taaaccggca ggttatagct gatggtacgc
    11401 ttatgctcag tcagcgtttc ttcgaggaat accgccactt cgatttcaat atcgtggccg
    11461 cgtgcggcgg ggcgttgacg gctctggcgg gcatgctgac cgaaaattga cgagaagata
    11521 tcgtcaaaat cttcggcatt aaaactctga ccgtcgccat gatggaactg acggttaaat
    11581 tgcggatcgt tgcgatgttg ccacatctga tcatactcag cgcgacgttg ttcatcactt
    11641 aacacttccc aggcttcagc gacctctttg aagcgggctt cggcatccgg ttctttgctg
    11701 acatcaggat ggtatttacg ggccagtcga cgataggcgg tcttgattgt cttgagatcg
    11761 tccgtcggtt tcacgcccat gatggcgtaa taatccttta attccatagc gttatctcgc
    11821 gtaaatcaac acaaattgaa ggaacccctg taaggtaact cctataagtg tagggtaatc
    11881 ctcaaaattt catatgccaa cacagaatat gttattgaaa tcatcgtgga gaggaggtcg
    11941 ccatcaatat gggttgctga acatatttta aacaggtgaa aaagggtgag cgatttttga
    12001 tagttgaacc aggcacttta agtttaacta gggcgtcatt atttattaaa tttt
//
LOCUS       DADMJE010000127        12043 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.128, whole genome shotgun sequence.
ACCESSION   DADMJE010000127 DADMJE010000000
VERSION     DADMJE010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 12043)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12043)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12043
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.128"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..413)
                     /locus_tag="JN001_003073"
     CDS             complement(<1..413)
                     /locus_tag="JN001_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
                     /protein_id="HAY9054231.1"
                     /translation="MPRLTAKDFPQELLDYYDYYAHGKISKREFLNLAAKYAVGGMTA
                     LALFDLLKPNYVLTTQVEFTDPEIVAEYITYPSPNGHGEVRGYLVKPAKMSGKTPAVV
                     VVHENRGLNPYIEDVARRVTKAGYIALAPDGLSSVG"
     gene            569..1609
                     /gene="gpr"
                     /locus_tag="JN001_003074"
     CDS             569..1609
                     /gene="gpr"
                     /locus_tag="JN001_003074"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-glyceraldehyde 3-phosphate reductase"
                     /protein_id="HAY9054232.1"
                     /translation="MVWLANPERYGQMQYRYCGKSGLRLPALSLGLWHNFGHVNALES
                     QRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRLLREDFAAYRDELIISTKAGYDM
                     WPGPYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQSG
                     KALYVGISSYSPERTQKMVELLHEWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVG
                     CIAFTPLAQGLLTGKYLNGIPQDSRMHREGNKVRGLTPKMLTEANLNSLRLLNEMAQQ
                     RGQSMAQMALSWLLKDDRVTSVLIGVSRAEQLEENVQALNNLTFSTEELAQIDQHIAD
                     GELNLWQASSDK"
     gene            complement(1649..2143)
                     /locus_tag="JN001_003075"
     CDS             complement(1649..2143)
                     /locus_tag="JN001_003075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00645 family protein"
                     /protein_id="HAY9054233.1"
                     /translation="MERFLENAMYASRWLLAPVYFGLSLALVALALKFFQEIIHVLPN
                     IFSMAESDLILVLLSLVDMTLVGGLLVMVMFSGYENFVSQLDISENKEKLNWLGKMDA
                     TSLKNKVAASIVAISSIHLLRVFMDAKNVPDNKLMWYVIIHLTFVLSAFVMGYLDRLT
                     RHNH"
     gene            2334..3218
                     /gene="yghA"
                     /locus_tag="JN001_003076"
     CDS             2334..3218
                     /gene="yghA"
                     /locus_tag="JN001_003076"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP(+)-dependent aldehyde reductase"
                     /protein_id="HAY9054234.1"
                     /translation="MSHLKDPTTQYYTGEYPKQKQPTPGIQAKMTPVPDCGEKTYVGS
                     GRLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKA
                     VLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAIN
                     VFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGQAKQVA
                     EKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAPVYVYLASQE
                     SSYVTAEVHGVCGGEHLG"
     gene            complement(3490..3915)
                     /gene="exbD"
                     /locus_tag="JN001_003077"
     CDS             complement(3490..3915)
                     /gene="exbD"
                     /locus_tag="JN001_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB system transport protein ExbD"
                     /protein_id="HAY9054235.1"
                     /translation="MAMHLNENLDDNGEMHDINVTPFIDVMLVLLIIFMVAAPLATVD
                     VKVNLPASTSTPQPRPEKPVYLSVKADNSMFIGNDPVTDETMITALNALTEGKKDTTI
                     FFRADKTVDYETLMKVMDTLHQAGYLKIGLVGEETAKAK"
     gene            complement(3922..4656)
                     /gene="exbB"
                     /locus_tag="JN001_003078"
     CDS             complement(3922..4656)
                     /gene="exbB"
                     /locus_tag="JN001_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HAY9054236.1"
                     /translation="MGNNLMQTDLSVWGMYQHADIVVKCVMIGLILASVVTWAIFFSK
                     SVEFFNQKRRLKREQQLLAEARSLNQANDIAADFGSKSLSLHLFNEAQNELELSEGSD
                     DNEGIKERTSFRLERRVAAVGRQMGRGNGYLATIGAISPFVGLFGTVWGIMNSFIGIA
                     QTQTTNLAVVAPGIAEALLATAIGLVAAIPAVVIYNVFARQIGGFKAMLGDVAAQVLL
                     LQSRDLDLEASAAAHPVRVAQKLRAG"
     gene            4908..6095
                     /gene="metC"
                     /locus_tag="JN001_003079"
     CDS             4908..6095
                     /gene="metC"
                     /locus_tag="JN001_003079"
                     /EC_number="4.4.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HAY9054237.1"
                     /translation="MADKKLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFESMEAKKH
                     ATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCALFPCGAAAVANSILAFVEQGD
                     HVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSIT
                     MEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDA
                     MIGTAVCNARCWEQLRENAYLMGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEW
                     LAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLSNEELANYLDNFSLF
                     SMAYSWGGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFA
                     RIV"
     gene            6235..6894
                     /locus_tag="JN001_003080"
     CDS             6235..6894
                     /locus_tag="JN001_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HAY9054238.1"
                     /translation="MAVIQDIIAALWQHDFAALADPHIVSVVYFVMFATLFLENGLLP
                     ASFLPGDSLLILAGALIAQGVMDFLPTIAILTAAASLGCWLSYIQGRWLGNTKTVKGW
                     LAQLPAKYHQRATCMFDRHGLLALLAGRFLAFVRTLLPTMAGISGLPNRRFQFFNWLS
                     GLLWVSVVTSFGYALSMIPFVKRHEDQVMTFLMILPIALLTAGLLGMLFVVIKKKYCN
                     A"
     gene            complement(6934..7833)
                     /locus_tag="JN001_003081"
     CDS             complement(6934..7833)
                     /locus_tag="JN001_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003024513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY9054239.1"
                     /translation="MKREEICRLLADKVNKLKNKENSLSELLPDVRLLYGETPFARTP
                     VMYEPGIIILFSGHKIGYINERVFRYDANEYLLLTVPLPFECETYATSEVPLAGLRLN
                     VDILQLQELLMDIGEDEHFQPSMAASGINSATLSEEILCAAERLLDVMERPLDARILG
                     KQIIREILYYVLTGPCGGALLALVSRQTHFSLISRVLKRIENKYTENLSVEQLAAEAN
                     MSVSAFHHNFKSVTSTSPLQYLKNYRLHKARMMIIHDGMKASAAAMRVGYESASQFSR
                     EFKRYFGVTPGEDAARMRAMQGN"
     gene            8027..9190
                     /gene="yqhD"
                     /locus_tag="JN001_003082"
     CDS             8027..9190
                     /gene="yqhD"
                     /locus_tag="JN001_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase"
                     /protein_id="HAY9054240.1"
                     /translation="MNNFNLHTPTRILFGKGAIAGLREQIPHDARVLITYGGGSVKKT
                     GVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFLLAVGGGSVLDGTK
                     FIAAADNYPENIDPWHILQTGGKEIKSAIPMGCVLTLPATGSESNAGAVISRKTTGDK
                     QAFHSAHVQPVFAVLDPVYTYTLPPRQVANGVVDAFVHTVEQYVTKPVDAKIQDRFAE
                     GILLTLIEDGPKALKEPENYDVRANVMWAATQALNGLIGAGVPQDWATHMLGHELTAM
                     HGLDHAQTLAIVLPALWNEKRDTKRAKLLQYAERVWNITEGSDDERIDAAIAATRNFF
                     EQLGVPTHLSDYGLDGSSIPALLKKLEEHGMTQLGENHDITLDVSRRIYEAAR"
     gene            9295..10122
                     /gene="dkgA"
                     /locus_tag="JN001_003083"
     CDS             9295..10122
                     /gene="dkgA"
                     /locus_tag="JN001_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417485.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgA"
                     /protein_id="HAY9054241.1"
                     /translation="MANPTVIKLQDGNVMPQLGLGVWQASNEEVIIAIQKALEVGYRS
                     IDTAAAYKNEEGVGKALKNASVNREELFITTKLWNDDHKRPREALLDSLKKLQLDYID
                     LYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCNFQIHHLQRLIDETGVTPVINQ
                     IELHPLMQQRQLHAWNATHKIQTESWSPLAQGGKGVFDQKVIRDLADKYGKTPAQIVI
                     RWHLDSGLVVIPKSVTPSRIAENFDVWDFRLDKDELGEIAKLDQGKRLGPDPDQFGG"
     gene            10322..11248
                     /locus_tag="JN001_003084"
     CDS             10322..11248
                     /locus_tag="JN001_003084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708829.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbjP/YqhG family protein"
                     /protein_id="HAY9054242.1"
                     /translation="MKIILLFLAALASFTVHAQPPSQTVEQTVRQIYQNYKSDASTPY
                     FGETGERAITSARIQQALTLNDNLTLPGNIGWLDYDPVCDCQDFGDLVLESVAITQTD
                     ADHADAVVRFRIFKDDKEKTTQTLKMVAENGRWVIDDIVSNHGSVLQAVNSENEKTLA
                     ALASLQKEQPEAFVAELFEHIADYSWPWTWVVSDSYRQAVNAFYKTTFKTANNPDEDM
                     QIERQFIYDNPICFGEESLFSRVDEIRVLEKTADSARIHVRFTLTNGNNEEQELVLQR
                     REGKWEIADFIRPNSGSLLKQIEAKTAARLKQ"
     gene            11299..11556
                     /gene="yqhH"
                     /locus_tag="JN001_003085"
     CDS             11299..11556
                     /gene="yqhH"
                     /locus_tag="JN001_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein YqhH"
                     /protein_id="HAY9054243.1"
                     /translation="MKTIFTVGAVVLATCLLSGCVNEQKVNQLASNVQTLNAKIARLE
                     QDMKALRPQIYAAKSEANRANTRLDAQDYFDCLRCLRMYAE"
     gene            11636..>12043
                     /locus_tag="JN001_003086"
     CDS             11636..>12043
                     /locus_tag="JN001_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001603762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054244.1"
                     /translation="MRRWHTCFFILLFCGFSGNVLCKESINEAIERLYQPLTSNDDIP
                     ITDEFSLDLRSNMSATPGKMTPWLNNNLLCRCVDDAFVSAEIIQSTHLNGGRTHVLLQ
                     LVIKQNRTDIHRLLGLMLVRENDNHRWLIEDIDD"
BASE COUNT         3118 a         3056 c         3002 g         2867 t
ORIGIN      
        1 ccaacggaac ttaagccgtc aggtgccagg gcgatatacc ccgccttcgt cactcgccgt
       61 gccacatctt cgatatacgg attcagtcca cgattctcat gcaccaccac cacggctggc
      121 gttttgccgc tcatttttgc gggtttcacc agataacccc gtacctcgcc gtgaccattt
      181 ggcgaaggat acgtgatgta ctcagcaaca atctccgggt cggtaaactc tacctgagtc
      241 gtcagcacat aatttggctt gagcaaatca aacaacgcta atgccgtcat cccgcccacc
      301 gcatacttcg ccgcaaggtt gaggaactca cgtttcgaaa ttttcccgtg agcgtaatag
      361 tcgtagtaat ccaacaactc ttgtgggaaa tctttggcgg ttaaacgcgg catcgttgca
      421 ttcctcaact ggtgtttttt aagcaaagca taagcgcgtg tttttgccca gtttttcgtc
      481 actctgtgag ccagactacg ggatacgcgc tggcgaatcg ctaaactaga aacattgttt
      541 cgaaattgaa cggtggaaag gagaggtcat ggtctggtta gcgaatcccg aacgttacgg
      601 gcagatgcag taccgctatt gcggaaaaag tggtttacgc ctgcccgcgt tatcgctcgg
      661 tttatggcac aatttcggtc acgttaacgc gctggaatca cagcgtgcaa tcctgcgtaa
      721 agcgtttgat ttaggcatta cgcactttga tttagccaac aattacgggc cgcctccagg
      781 aagcgcagaa gagaactttg gtcgcctgct gcgggaggat tttgccgctt atcgcgatga
      841 actgattatc tctaccaagg ctggctacga tatgtggccc ggcccttacg gctctggcgg
      901 ttcacgtaaa tacctgctcg ccagcctcga ccaaagcctg aagcgtatgg ggcttgagta
      961 tgtcgatatc ttttactctc atcgcgtcga tgaaaatacg ccgatggaag aaaccgcctc
     1021 tgcgctggct catgcggtac aaagcggtaa ggcgctgtat gtcgggatct cctcttactc
     1081 gccagagcgg acgcaaaaaa tggtcgagtt gctgcacgag tggaaaattc cgcttttaat
     1141 tcatcaacct tcgtacaatt tactgaaccg ctgggtggat aaaagcggcc tgctggatac
     1201 cctgcaaaat aacggcgtgg gctgtattgc ctttactcct ctggctcagg gattgctgac
     1261 cggaaaatat ctcaacggca ttccgcaaga ttcacggatg catcgtgaag ggaataaagt
     1321 tcgtggtctg acgccgaaaa tgcttaccga agccaacctc aacagcctgc gcttattgaa
     1381 tgaaatggca cagcagcgtg gacaatcaat ggcgcaaatg gcgttaagct ggttgctgaa
     1441 agatgatcgc gtgacgtcgg tattgattgg tgtcagccgc gcggagcaac tagaggagaa
     1501 cgtgcaggcg ctgaataatc tgacatttag caccgaggag ctggcgcaga ttgatcagca
     1561 tatcgccgat ggcgagctga atctgtggca ggcgtcttcc gataaatgac ctgttaataa
     1621 cgggcgcgcg aaccgcgccc gaatcagatc agtgattatg acgagtcagt cggtcaagat
     1681 agcccatcac aaatgcagag agcacaaacg tcagatggat aatgacgtac cacatcagtt
     1741 tgttatccgg gacatttttc gcatccataa agacgcgcag taagtgaatg gaagaaattg
     1801 ccacaatcga cgctgctact ttgtttttca gcgacgttgc gtccattttc cccagccagt
     1861 tcagcttctc tttgttctcg gagatatcca gctgcgagac gaaattctca taaccggaaa
     1921 acatcaccat caccagcaaa ccgccaacca gcgtcatatc caccagcgac agcaacacga
     1981 ggatcaaatc tgattccgcc atcgagaaga tattcggcag tacgtgaata atctcctgga
     2041 agaacttcag cgccagggca actaacgcca gcgaaaggcc aaagtacacg ggggcaagca
     2101 gccagcgaga agcatacatt gcattttcaa gaaaacgttc catacattcc tgtcgtgtag
     2161 ttaaaacggg caacagtata tcgcaattga gtaaacagca cgcaacagca aatcaacata
     2221 tacgttaaac ctttgtcgca taattctgag gtttagggat cttcctggtt cccttatcaa
     2281 cgcatcgaga gcgtctaccc ttaaaagacg ttgaacctga agggagaaaa acaatgtctc
     2341 atttaaaaga cccgactacg cagtattaca ctggtgaata tcccaaacag aaacaaccga
     2401 cgccaggcat ccaggcgaag atgacaccgg taccggattg cggcgagaaa acctatgttg
     2461 gtagcggtcg cctgaaagat cgtaaagcac tggtgacagg gggcgattcc ggaataggtc
     2521 gcgctgccgc catcgcttac gcgcgtgaag gggctgacgt ggcgatcagt tatcttcccg
     2581 tggaagaaga agacgctcag gatgtgaaaa agatcattga agaatgcgga cgcaaagccg
     2641 ttctgctgcc aggcgattta agcgatgaga aattcgcccg ttcgctggtt cacgaagcgc
     2701 acaaggcgtt aggcgggctg gatattatgg cgctggtcgc cgggaaacag gttgccattc
     2761 cggatattgc agacctcacc agcgaacagt ttcaaaagac ctttgccatt aacgttttcg
     2821 cgctgttctg gctaacccag gaagcgatcc ccctgctacc gaaaggtgca agtatcatca
     2881 ccacttcgtc aatccaggca taccagccaa gtccgcattt actggactat gcggctacga
     2941 aggcggcgat tctgaactac agccgtggcc aggcaaaaca ggtcgcggag aaaggtattc
     3001 gggtgaatat tgtcgcgcca ggccctatct ggacggcact gcaaatttcc ggcggacaaa
     3061 cgcaggataa gatcccgcag tttggtcagc aaacgccgat gaagcgtgcg gggcaaccgg
     3121 cggaactggc ccctgtatat gtttatctgg caagtcagga gtcgagctac gtcaccgcag
     3181 aagtgcacgg tgtgtgcggc ggcgagcatt taggttaaaa aaatgcccgg ttgtgaaaag
     3241 caaccgggca tcattgtgaa ttcactctta cctgatgtgg cgaaaacgcc ttatccgcct
     3301 acaaacgcat gaagattcaa catgttgcaa tagattttgt aggcctgata agcgtagcgc
     3361 atcaggcatt gagcacctaa tgccggatgc ggcgtgaacg ccttatccgg cctacaaacg
     3421 cacgaagatt caacatgttg caatagattt tgtaggcctg atgagcgtag cgcatcaggc
     3481 aattctactt tacttcgctt tggcggtttc ttcgccgacc agacctatct tcaggtaacc
     3541 cgcctgatgc agcgtatcca ttaccttcat caacgtctcg taatcgacgg ttttatccgc
     3601 tcggaagaag atggtggtgt ctttcttgcc ttcggttaac gcattcaacg ccgtaatcat
     3661 tgtttcatcg gtgaccggat cgttaccgat aaacatcgag ttgtctgcct tcaccgacag
     3721 ataaaccggt ttttccgggc gcggctgcgg cgtgctggta gaagcaggca agttcacctt
     3781 cacatctacc gtcgctaacg gtgccgccac cataaagata atcagcagaa ccaacatcac
     3841 gtcgataaac ggcgtcacgt tgatatcatg catttcgccg ttatcgtcga ggttttcgtt
     3901 aagatgcatt gccatcggat attatcctgc gcgtaatttt tgtgcgacac gaaccggatg
     3961 cgcagcggcg ctggcttcca gatccaggtc acggctttgc agcaacaata cctgcgctgc
     4021 aacatcaccc agcatcgctt taaagccgcc aatctggcgt gcaaatacgt tatagataac
     4081 gaccgcagga atcgctgcca cgaggccgat tgccgttgct aacagagctt ctgcgatacc
     4141 cggcgcaacg actgccaggt tagtggtctg cgtttgcgcg ataccaataa agctgttcat
     4201 gatgccccag accgtaccaa acagaccaac gaacggagaa atcgcgccga tggttgccag
     4261 atagccgtta ccgcggccca tttgacgacc cactgcggcg acccgacgct ccagacggaa
     4321 gctggtacgt tctttaatac cttcgttatc gtcgctgcct tctgacagtt ccagctcatt
     4381 ctgcgcttca ttgaacaaat gcaggcttaa gcttttgcta ccaaaatcag cggcgatatc
     4441 gttggcctgg tttaaggaac gcgcttcagc cagcagttgc tgctcgcgct ttaggcgacg
     4501 cttctgattg aagaactcta cgctcttact gaagaagatt gcccaggtga ctacggaggc
     4561 caaaataagc ccaatcatca cgcacttaac gacaatatcg gcgtgctgat acatacccca
     4621 gacggaaagg tctgtctgca ttaaattatt acccactgtg tatctccagg acgcaagtca
     4681 caaaatctgc gcataataat atcaaaacga cgtcgaattg atagtcattc tcattactat
     4741 ttgcatactg ccgtaccttt gctttctttt ccttgcgttt acgcagtaaa aaagtcacca
     4801 gcacgccatt tgcgaaaatt ttctgcttta tgccaattct tcaggatgcg cccgcgaata
     4861 ttcatgctag tttagacatc cagacgtata aaaacaggaa tcccgacatg gcggacaaaa
     4921 agcttgatac tcaactggtg aatgcaggac gcagcaaaaa atacactctt ggcgcggtaa
     4981 atagcgtgat tcagcgcgct tcttcgctgg tatttgagag tatggaagcc aaaaagcacg
     5041 cgacgcgcaa tcgcgccaat ggcgagttgt tctatggacg gcgcggaacg ttaacccatt
     5101 tttccttaca acaagcgatg tgtgaactgg aaggtggcgc aggctgcgcg ctatttccct
     5161 gcggggcggc agcggttgct aattcgattc ttgcttttgt cgaacagggc gatcatgtgt
     5221 tgatgaccaa cactgcctat gaaccgagtc aggatttctg tagcaaaatc ctcagcaaac
     5281 tgggcgtaac gacatcgtgg tttgatccgc tgattggtgc cgatatcgtt aagcatctgc
     5341 agccaaacac taaaatcgtg tttctggaat cgccaggctc catcaccatg gaagtccacg
     5401 acgttccggc gattgttgcc gccgtacgca gtgtggtgcc ggatgccatc attatgatcg
     5461 acaacacctg ggcagccggt gtgctgttta aggcactgga ttttggcatc gatgtttcta
     5521 ttcaagccgc caccaaatat ctggttgggc attcagatgc gatgattggc actgccgtgt
     5581 gcaatgcccg ttgctgggag cagctacggg aaaacgccta tctgatgggc cagatggtcg
     5641 atgccgatac cgcctatata accagccgtg gcctgcgcac attaggtgtg cgtttgcgtc
     5701 aacatcatga aagcagtctg aaagtggctg aatggctggc agaacatccg caagtagcgc
     5761 gagttaacca ccctgctctg cctggcagta aaggacacga attctggaaa cgagacttta
     5821 caggtagcag cgggctgttt tcctttgtgc ttaagaaaaa actcagtaat gaagagctgg
     5881 cgaactatct ggataacttc agtttattca gcatggccta ctcgtggggc gggtatgaat
     5941 cgttgatcct ggcgaatcaa ccagaacata tcgccgccat tcgcccacaa ggcgagatcg
     6001 attttagcgg gaccttgatt cgcctgcata ttggtctgga agatgtcgac gatctgattg
     6061 ccgatctgga cgccggtttt gcgcgaattg tataacattg ccacttttgg acaattttgc
     6121 agacatttaa ttgtgaaaag tcttaaattg ttgcgtccgg gatcaaggcg tcccggacga
     6181 atcaggagta caataggcag ataaaggctt aaacgctgtt ccacaggaaa gtccatggct
     6241 gttattcaag atatcatcgc tgcgctctgg caacacgact ttgccgcgct ggcggatcct
     6301 catattgtta gcgttgttta ctttgtcatg tttgccacgc tgtttttaga aaacggcctg
     6361 ctgcccgcct catttttgcc aggcgacagc ttgttgatac tggcaggcgc attgattgcc
     6421 cagggggtta tggattttct gcctacgatt gcgattctga ccgccgcagc aagtctgggc
     6481 tgctggctaa gttatattca ggggcgctgg ttagggaata ccaaaacggt gaaaggctgg
     6541 ctggcacagc ttcctgctaa atatcaccag cgcgccacct gcatgtttga ccgccacggt
     6601 ctgctggcgc tgctggctgg acgttttctt gcatttgtcc gtacgctgct gccaaccatg
     6661 gcgggaattt ccggtctgcc aaaccgccgc ttccagtttt tcaactggtt aagtggattg
     6721 ctgtgggtca gcgtggtaac cagttttggc tatgccttaa gtatgattcc gttcgttaaa
     6781 cgccatgaag atcaggtaat gacgttcctg atgatcctgc caattgcctt gttaaccgct
     6841 ggcttgttag gcatgctgtt tgtggtgatt aaaaaaaaat actgtaacgc ctgacgattt
     6901 tccccgttcc cggctgctgt accgggaacg tatttaattc ccctgcatcg cccgcattct
     6961 tgccgcatct tcccccggcg tcacaccgaa gtaacgttta aactcacggc taaattgcga
     7021 tgcgctttca tagccgacgc gcatcgctgc tgcgctggcc ttcatgccgt catggatgat
     7081 catcatccgc gccttatgca gacggtaatt cttcaaatac tgcaacggcg aggtgctggt
     7141 gacagactta aaattatggt ggaacgccga tacgctcatg ttggcttctg ccgccagttg
     7201 ctcgacgctc aggttttcgg tgtatttatt ctcaatccgt ttcagcacgc ggctaatcag
     7261 actgaagtga gtctggcgac tgaccagcgc cagtaacgcg ccgccgcaag gtccggtcag
     7321 cacgtagtac agaatttcgc ggatgatctg tttgccgaga atacgcgcat ccagtggtcg
     7381 ctccatcacg tcgagtaacc gctccgccgc gcataaaatc tcttctgata acgtggcgga
     7441 gttaatcccg ctggctgcca tcgacggctg gaaatgctca tcttcgccaa tgtccatcaa
     7501 cagttcctgt aactgcaaaa tatcgacatt gagacgcaac cctgccagcg gcacctctga
     7561 cgtggcatag gtttcgcact caaacggcaa cggcaccgtc agcagcaggt attcattggc
     7621 atcataacga aacacgcgtt cattgatata accgatttta tgcccggaaa agagaattat
     7681 gatgccaggc tcgtacatca ccggtgtacg tgcgaaaggc gtctcaccat acaacaaacg
     7741 cacatcgggc aacagttctg acaaactatt ttctttattt ttcagtttat taactttatc
     7801 cgccagcaag cggcaaatct cttcacgttt catatcgcgt aatttcttag gaataatgcg
     7861 gcaatttgat tgtgcgcaat tttgtagcat ttctccagca ctctggagaa ataggcaaga
     7921 cattggcaga aatgagcatt gagagccagg gcgctggcga tcacaatgaa aaacatcagg
     7981 cagatcgttc tctgccctca tattggccca gcaaagggag caagtaatga acaactttaa
     8041 tctgcacacc ccaacccgca ttctgtttgg taaaggcgca atcgctggtt tacgcgaaca
     8101 aattcctcac gatgctcgcg tattgattac ctacggtggc ggcagcgtga aaaaaaccgg
     8161 cgttctcgat caagttctgg atgccctgaa aggcatggac gtgctggaat ttggcggtat
     8221 tgagccaaac ccggcttatg aaacgctgat gaacgccgtg aaactggttc gcgaacagaa
     8281 agtgactttc ctgctggcgg ttggcggcgg ttctgtactg gacggcacca aatttatcgc
     8341 cgcagcggat aactatccgg aaaatatcga tccgtggcac attctgcaaa cgggcggtaa
     8401 agagattaaa agcgccatcc cgatgggctg tgtgctgacg ctgccagcaa ccggttcaga
     8461 atccaacgca ggcgcggtga tctcccgtaa aaccactggc gacaagcagg cgttccattc
     8521 tgcccatgtt cagccggtat ttgccgtgct cgatccggtt tatacctaca ccctgccgcc
     8581 gcgtcaggtg gctaacggcg tagtggacgc ctttgtacac accgtggaac agtatgttac
     8641 caaaccggtt gatgccaaaa ttcaggaccg tttcgcagaa ggcattttgc tgacgctgat
     8701 cgaagatggt ccgaaagccc tgaaagagcc agaaaactac gatgtgcgcg ccaacgtcat
     8761 gtgggcggcg acgcaggcgc tgaacggttt gattggcgct ggcgtaccgc aggactgggc
     8821 aacgcatatg ctgggccacg aactgactgc gatgcacggt ctggatcacg cgcaaacact
     8881 ggctatcgtc ctgcctgcac tgtggaatga aaaacgcgat accaagcgcg ctaagctgct
     8941 gcaatatgct gaacgcgtct ggaacatcac tgaaggttcc gacgatgagc gtattgacgc
     9001 cgcgattgcc gcaacccgca atttctttga gcaattaggc gtgccgaccc acctctccga
     9061 ctacggtctg gacggcagct ccatcccggc tttgctgaaa aaactggaag agcacggcat
     9121 gacccaactg ggcgaaaatc atgacattac gttggatgtc agccgccgta tatacgaagc
     9181 cgcccgctaa gctttttacg cctcaaactt tcgttttcgg gcatttcgtc cagacttaag
     9241 ttcacaacac ctcaccggag cctgctccgg tgagttcata taaaggagga acgtatggct
     9301 aatccaaccg ttattaagct acaggatggc aatgtcatgc cccagctggg actgggcgtc
     9361 tggcaagcaa gtaatgagga agtaatcatc gccattcaaa aagcgttaga agtgggttat
     9421 cgctcgattg ataccgccgc ggcctacaag aacgaagaag gtgtcggcaa agccctgaaa
     9481 aatgcctcag tcaacagaga agaactgttc atcaccacta agctgtggaa cgacgaccac
     9541 aagcgccccc gcgaagccct gctcgacagc ctgaaaaaac tccagcttga ttatatcgac
     9601 ctctacttaa tgcactggcc cgttcccgct atcgaccatt atgtcgaagc atggaaaggc
     9661 atgatcgaat tgcaaaaaga gggattaatc aaaagcatcg gcgtgtgcaa cttccagatc
     9721 catcacctgc aacgcctgat tgatgaaact ggcgtgacgc ctgtgataaa ccagatcgaa
     9781 cttcatccgc tgatgcaaca acgccagcta cacgcctgga acgcgacaca caaaatccag
     9841 accgaatcct ggagcccatt agcgcaagga gggaaaggcg ttttcgatca gaaagtcatt
     9901 cgcgatctgg cagataaata cggcaaaacc ccggcgcaga ttgttatccg ctggcatctg
     9961 gatagcggcc tggtggtgat cccgaaatcg gtcacacctt cacgtattgc cgaaaacttt
    10021 gatgtctggg atttccgtct cgacaaagac gaactcggcg aaattgcaaa actcgatcag
    10081 ggcaagcgtc tcggtcccga tcctgaccag ttcggcggct aacatgcaaa ttctcccggt
    10141 ggcggtaatg ttccgctacc ggacttttca gaaatcattt attcccctcg cgtcccgccc
    10201 gttgttactc ttccttgttc aggaatgcca aatataagga catcatcatg cagagccgga
    10261 agctcttaaa agaacaactc atctatatcc gggataaacg caacggagag gtgaaaaaca
    10321 gatgaaaata atacttctgt ttttagcagc cctggcaagt tttaccgtac acgcgcagcc
    10381 tccttcacag accgtagaac aaacagtccg gcagatttat cagaactata aatcagatgc
    10441 cagtacgcct tatttcggtg aaaccggaga gcgggcgata acttcagcgc gtattcaaca
    10501 ggcgcttacc ctgaacgaca atcttacgct gccgggcaat attggctggc tggattatga
    10561 tccggtttgt gattgtcagg attttggcga tctggtgcta gaaagcgttg cgataaccca
    10621 aactgacgcc gatcatgccg atgccgttgt gcgctttcgt atctttaaag atgataaaga
    10681 aaagaccacg cagacactga aaatggtggc ggaaaatggt cgttgggtca ttgacgatat
    10741 tgtcagcaat catggcagtg tcttacaagc agttaatagc gagaatgaaa aaacgctggc
    10801 cgctttagct tcgttgcaaa aagaacagcc ggaagccttt gttgccgaac tctttgaaca
    10861 tattgctgat tatagctggc cgtggacgtg ggtggtttcc gactcttacc gccaggcggt
    10921 taatgccttc tataaaacca ccttcaagac ggccaataat cccgatgaag atatgcaaat
    10981 agaacggcaa tttatttacg acaatccgat ctgttttggc gaagagtcgc tattttcacg
    11041 cgttgatgaa attcgagtcc tggagaaaac cgccgattcc gcccgcattc atgttcgttt
    11101 tacgctgacc aatggcaaca acgaagagca agaactggtt ttacagcggc gcgaaggcaa
    11161 gtgggaaatc gctgatttta tccgcccgaa cagcggcagc ctacttaagc agattgaggc
    11221 aaaaactgcc gccagattaa agcaatgagc tgaattaaat aacaattagc cggaacaata
    11281 aataaaaggg aacactatat gaaaacgatt ttcaccgtgg gagctgttgt tctggcaacc
    11341 tgcttgctca gtggctgcgt caatgagcaa aaggtcaatc agctggcgag caatgtgcaa
    11401 acattaaatg ccaaaatcgc ccggcttgag caggatatga aagcactacg cccacaaatc
    11461 tatgctgcca aatccgaagc taacagagcc aatacgcgtc ttgatgcaca ggactatttt
    11521 gattgcctgc gctgcttgcg tatgtacgca gaatgataaa aaaatccccg gcagcatgtc
    11581 agttgccggg ttataggctg tttgctaaaa aaaagccaaa cataaggaca tgattatgcg
    11641 acgctggcac acctgttttt ttattctgct gttctgtggc ttcagcggaa acgtgttgtg
    11701 caaagaatcg attaatgaag cgatagaacg tttgtaccaa ccattgacca gtaatgacga
    11761 tataccaata accgatgaat tcagtctcga tttgcgaagt aatatgagcg ctactcctgg
    11821 caaaatgaca ccctggctga ataataatct tttgtgtcgc tgtgtcgatg acgctttcgt
    11881 ttctgcagaa ataatccaaa gcacacacct aaatggcggc cgaacgcatg tactgttgca
    11941 gctggttatc aaacaaaatc gcacagatat ccaccggtta ctggggctaa tgctggttcg
    12001 tgaaaatgat aatcatcgtt ggctaataga agacatcgat gac
//
LOCUS       DADMJE010000128        11883 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.129, whole genome shotgun sequence.
ACCESSION   DADMJE010000128 DADMJE010000000
VERSION     DADMJE010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11883)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11883)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11883
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.129"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(39..353)
                     /locus_tag="JN001_003087"
                     /pseudo
     CDS             complement(39..353)
                     /locus_tag="JN001_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418152.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IIB family hydrolase"
     gene            complement(468..875)
                     /locus_tag="JN001_003088"
     CDS             complement(468..875)
                     /locus_tag="JN001_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HAY9054245.1"
                     /translation="MIIMGLFDEVVGAFLKGDAGKYQAILSWVEEQGGIQVLLEKLQS
                     GGLGAILSTWLSNQQSNQSVSGEQLESAPGTNAVSDLGQKLGVDTSTASSLLAEQLPK
                     IIDALSPQGEVSSQANNDLLSAGMELLKGKLFR"
     gene            complement(1106..3520)
                     /gene="gyrB"
                     /locus_tag="JN001_003089"
     CDS             complement(1106..3520)
                     /gene="gyrB"
                     /locus_tag="JN001_003089"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HAY9054246.1"
                     /translation="MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVV
                     DNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGG
                     KFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGET
                     EKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHY
                     EGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQR
                     DGGTHLAGFRAAMTRTLNAYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSS
                     QTKDKLVSSEVKSAVEQQMNELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMT
                     RRKGALDLAGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
                     LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDADVDGSHIRT
                     LLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDEAMDQYQISIALDGATL
                     HTNASAPALAGEALEKLVSEYNATQKMINRMERRYPKAMLKELIYQPTLTEADLSDEQ
                     TVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLFEPIVRVRTHGVDTDYPLDHEFI
                     TGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFEQALDWLVKESRRGLSIQRYK
                     GLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADLLFTTLMGDAVEPRRAFIEENALK
                     AANIDI"
     gene            complement(3549..4622)
                     /gene="recF"
                     /locus_tag="JN001_003090"
     CDS             complement(3549..4622)
                     /gene="recF"
                     /locus_tag="JN001_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HAY9054247.1"
                     /translation="MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIY
                     TLGHGRAFRSLQIGRVIRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDG
                     HKVAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWACFHNEPGFFTAWSNLKRLLKQ
                     RNAALRQVTRYEQLRPWDKELIPLVEQISTWRAEYSAGIAADMADTCKQFLPEFSLTF
                     SFQRGWEKETEYAEVLERNFERDRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKL
                     LMCALRLAQGEFLTRESGRRCLYLIDDFASELDDERRGLLASRLKATQSQVFVSAISA
                     EHVIDMSDENSKMFTVEKGKITD"
     gene            complement(4622..5722)
                     /gene="dnaN"
                     /locus_tag="JN001_003091"
     CDS             complement(4622..5722)
                     /gene="dnaN"
                     /locus_tag="JN001_003091"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006177590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HAY9054248.1"
                     /translation="MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSL
                     TGTDLEMEMVARVALVQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGERMLVRSG
                     RSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIEATQFSMAHQDVRYYLNGMLF
                     ETEGEELRTVATDGHRLAVCSMPIGQSLPSHSVIVPRKGVIELMRMLDGGDNPLRVQI
                     GSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPKNPDKHLEAGCDLLKQAFARAAILSNE
                     KFRGVRLYVSENQLKITANNPEQEEAEEILDVTYSGAEMEIGFNVSYVLDVLNALKCE
                     NVRMMLTDSVSSVQIEDAASQSAAYVVMPMRL"
     gene            complement(5727..7130)
                     /gene="dnaA"
                     /locus_tag="JN001_003092"
     CDS             complement(5727..7130)
                     /gene="dnaA"
                     /locus_tag="JN001_003092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HAY9054249.1"
                     /translation="MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPN
                     RFVLDWVRDKYLNNINGLLTSFCGADAPQLRFEVGTKPVTQTPQAAVTSNVAAPAQVA
                     QTQPQRAAPSTRSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADN
                     PGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNA
                     IEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEIN
                     GVEDRLKSRFGWGLTVAIEPPELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVR
                     ELEGALNRVIANANFTGRAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVA
                     DLLSKRRSRSVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREE
                     SHDIKEDFSNLIRTLSS"
     gene            7427..7507
                     /locus_tag="JN001_003093"
     CDS             7427..7507
                     /locus_tag="JN001_003093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054250.1"
                     /translation="MTIDKNWLNRSNKDPGRSLRFTHQPV"
     gene            7737..7877
                     /gene="rpmH"
                     /locus_tag="JN001_003094"
     CDS             7737..7877
                     /gene="rpmH"
                     /locus_tag="JN001_003094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001686914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HAY9054251.1"
                     /translation="MKRTFQPSVLKRNRSHGFRARMATKNGRQVLARRRAKGRARLTV
                     SK"
     gene            7894..8253
                     /gene="rnpA"
                     /locus_tag="JN001_003095"
     CDS             7894..8253
                     /gene="rnpA"
                     /locus_tag="JN001_003095"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014172301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HAY9054252.1"
                     /translation="MVKLAFPRELRLLTPSQFTFVFQQPQRAGTPQITILGRLNSLGH
                     PRIGLTVAKKNVRRAHERNRIKRLTRESFRLRQHELPAMDFVVVAKKGVADLDNRALS
                     EALEKLWRRHCRLARGS"
     gene            8217..8474
                     /gene="yidD"
                     /locus_tag="JN001_003096"
     CDS             8217..8474
                     /gene="yidD"
                     /locus_tag="JN001_003096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_462741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HAY9054253.1"
                     /translation="MAPPLSPGSRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEA
                     LRRFGVIKGSWLTVKRVLKCHPLHPGGDDPVPPGPFDTREH"
     gene            8477..10123
                     /gene="yidC"
                     /locus_tag="JN001_003097"
     CDS             8477..10123
                     /gene="yidC"
                     /locus_tag="JN001_003097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HAY9054254.1"
                     /translation="MDSQRNLLVIALLFVSFMIWQAWEQDKNPQPQAQQTTQTTTTAA
                     GSAADQGVPASGQGKLISVKTDVLDLTINTRGGDVEQALLPAYPKELNSTQPFQLLET
                     SPQFIYQAQSGLTGRDGPDNPANGPRPLYNVEKDAYVLAEGQNELQVPMTYTDAAGNT
                     FTKTFVLKRGDYAVNVNYNVQNAGEKPLEISTFGQLKQSITLPPHLDTGSSNFALHTF
                     RGAAYSTPDEKYEKYKFDTIADNENLNISSKGGWVAMLQQYFATAWIPHNDGTNNFYT
                     ANLGNGIAAIGYKSQPVLVQPGQTGAMNSTLWVGPEIQDKMAAVAPHLDLTVDYGWLW
                     FISQPLFKLLKWIHSFVGNWGFSIIIITFIVRGIMYPLTKTQYTSMAKMRMLQPKIQA
                     MRERLGDDKQRISQEMMALYKAEKVNPLGGCFPLLIQMPIFLALYYMLMGSVELRQAP
                     FALWIHDLSAQDPYYILPILMGVTMFFIQKMSPTTVTDPMQQKIMTFMPVIFTVFFLW
                     FPSGLVLYYIVSNLVTIIQQQLIYRGLEKRGLHSREKKKS"
     gene            10229..11593
                     /gene="mnmE"
                     /locus_tag="JN001_003098"
     CDS             10229..11593
                     /gene="mnmE"
                     /locus_tag="JN001_003098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HAY9054255.1"
                     /translation="MSDNDTIVAQATPPGRGGVGILRISGFKAREVAETVLGKLPKPR
                     YADYLPFKDADGSVLDQGIALWFPGPNSFTGEDVLELQGHGGPVILDLLLKRILTIPG
                     LRIARPGEFSERAFLNDKLDLAQAEAIADLIDASSEQAARSALNSLQGAFSARVNHLV
                     EALTHLRIYVEAAIDFPDEEIDFLSDGKIEAQLNDVIADLDAVRAEARQGSLLREGMK
                     VVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLRE
                     ASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVR
                     NKADITGETLGMSEVNGHALIRLSARTGEGVDVLRNHLKQSMGFDTNMEGGFLARRRH
                     LQALEQAAEHLQQGKAQLLGAWAGELLAEELRLAQQNLSEITGEFTSDDLLGRIFSSF
                     CIGK"
     gene            11836..>11883
                     /gene="tnaC"
                     /locus_tag="JN001_003099"
     CDS             11836..>11883
                     /gene="tnaC"
                     /locus_tag="JN001_003099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase leader peptide"
                     /protein_id="HAY9054256.1"
                     /translation="MNILHICVTSKWFNID"
BASE COUNT         2717 a         3254 c         3070 g         2842 t
ORIGIN      
        1 ggacaggggt atcgcttagt ttttcaattt cctatacgtg aaccgacttc gcgagagagt
       61 ttttccagga aacgatagtc gtcataactg agagcagttt gcgccacggt gctaccatca
      121 gcggccttct gtaccagcgc gccgttataa gtaatgcagt agtcgcccgg ctgttccata
      181 tgcagctctt tcaggtagtt gtgaacgcct gcataagggc gacccgtcgt tagcacgaca
      241 ttcacgccac gggcgcgagc tgcggcaatc gcatttttaa cggcgggtga aatggtgtga
      301 tcgggcagca gaagggtgcc atccatatcg atagcaatga gtttgatagc catgagttcc
      361 ccaggtagat tagttcctga cccatgctaa cgcgattccg ctcaaaaatc agtacaacac
      421 ccgagggaaa agggggatgc aacgcgggtt gcatgctccc catttgctta gcggaagagt
      481 ttccctttca gcagttccat acctgcggaa agcagatcgt tattggcttg tgaagacact
      541 tcaccttgcg gtgagagcgc atcaataatc ttcggcaatt gttctgccag taaactggaa
      601 gccgtactgg tatccacgcc aagtttttgc ccgagatcgg acaccgcatt tgtgccgggc
      661 gccgattcca gttgctcgcc gctaactgat tgattgctct gctgattact caaccaggtt
      721 gagagaatgg cccctaagcc gccactttgc agtttttcca gcagcacctg aatgccgccc
      781 tgctcctcaa cccaacttaa aatagcctga tatttccccg catcgccttt cagaaaggca
      841 ccgacaactt catcaaaaag ccccatgata atcacctgta aagcgttacg tgttgaccca
      901 aaaagtatag atctgcggga tgataattgc ggattgcaga aataaaaagg gcggagatga
      961 tctccgccct ttttttatag cttcttgccg gatgcggcgt taacgtctta cctggcctac
     1021 aaaatcatta aaattcaata cattgcaaga ttttcgtagg cctgataagc gtagcgcatc
     1081 aggcacgctc gcatggttaa cgccattaaa tatcaatatt cgccgctttc agggcgttct
     1141 cttcaataaa cgcacgacgc ggttctacgg cgtcgcccat cagcgtggtg aacaacaggt
     1201 cagcggcaat cgcatcctta acggtaacgc gcagcatacg acgactttcc gggtccatgg
     1261 tggtttccca cagctgttcc gggttcatct cgcccagacc tttataacgc tggatggaga
     1321 gaccgcgacg agactctttc accagccagt ccagcgcctg ctcgaagctg gctaccggct
     1381 gacgacgctc gccacgttcg ataaatgcat cttcttccag caagccacgc agtttctcac
     1441 ccagcgtgca gatacgacga tattcgccac cagtgataaa ttcgtgatcc agcggatagt
     1501 cagtatccac accgtgggta cgcacgcgaa caatcggctc gaacaggttt tgttcggcat
     1561 tggtgtggac atcaaacttc cactggctgc cgtgctgttc tttgtcgttc agttcgctga
     1621 ccagcgcgtt cacccagcgg gtaacggtct gctcatcaga gaggtcggct tccgtcagcg
     1681 tcggctgata gataagctct ttcagcattg ctttcggata acgacgctcc atgcggttga
     1741 tcattttctg cgtcgcgttg tactcagaca ccagtttctc taacgcttcg ccagccaatg
     1801 ccggtgcgct ggcgttggtg tgcagcgttg cgccgtccag cgcgatagag atctggtact
     1861 gatccatcgc ttcgtcgtct ttaatgtact gttcctgctt gcctttcttc actttgtaca
     1921 gcggcggctg agcgatgtag acgtgaccgc gttcaacgat ttccggcatc tgacgataga
     1981 agaaggtcaa cagcagcgta cgaatgtgcg agccgtcgac gtccgcatcg gtcatgatga
     2041 tgatgctgtg ataacgcagt ttgtccgggt tgtactcgtc acgaccgata ccacagccaa
     2101 gcgcggtgat aagcgtcgcc acttcctgag aagagagcat cttatcgaag cgcgctttct
     2161 caacgttgag gattttaccc ttcagcggca gaatcgcctg gttcttgcgg ttacgcccct
     2221 gcttcgcaga gccgcccgcg gagtcccctt ccaccaggta cagttcggaa agcgccggat
     2281 cgcgttcctg gcagtctgcc agtttgcccg gcaggcccgc taagtcgagc gcacctttac
     2341 ggcgggtcat ttcacgcgcg cgacgcgccg cttcacgggc acgggcagca tcgataattt
     2401 tgccaaccac gattttcgcg tcggttgggt tttccagcag gtattctgcc agcagttcgt
     2461 tcatctgctg ttcaaccgcc gatttcacct cagaagaaac cagtttgtct ttggtctggg
     2521 aggagaattt cgggtccggc acttttacgg aaacgaccgc aatcaggcct tcacgcgcat
     2581 cgtcaccggt ggcgctgact ttggcttttt tgctgtagcc ttctttgtcc atgtaggcgt
     2641 tcagggtacg ggtcatcgcc gcacggaagc ctgccaggtg agtaccgccg tcacgctgcg
     2701 gaatgttgtt ggtaaagcag tagatgtttt cctggaagcc atcgttccac tgcaacgcca
     2761 cttcgacgcc aataccgtct ttttcggtgg agaagtagaa gatattcgga tggatcggcg
     2821 ttttgttctt gttcagatat tcaacgaacg ccttgatgcc gccttcatag tggaagtggt
     2881 cttctttgcc gtcacgcttg tcgcgcagac gaatggaaac gccggagttg aggaacgaca
     2941 actcacgcag acgtttcgcc agaatttcat attcgaactc ggtcacattg gtgaaggttt
     3001 cgaggctggg ccagaaacgc accatggtgc cggttttttc agtctcgccg gtaaccgcca
     3061 gcggagcctg cggtacaccg tgttcgtaga tctgacggtg aattttaccc tcgcgctgga
     3121 taaccagctc cagtttttgc gacagggcgt ttactaccga aacaccaacg ccgtgcagac
     3181 cgccggacac tttataggag ttatcgtcaa atttaccgcc tgcgtgcaga acggtcatga
     3241 tcacttccgc cgccgatacg ccctcttccg ggtgaatacc ggtcggaatg ccgcgcccgt
     3301 catcctgtac agagacagag ttatcggcgt gaatggtgac gataatttct ttacagtgac
     3361 ccgcgagcgc ttcgtcgata gcgttatcta ccacctcgaa taccatgtgg tgcagaccgg
     3421 tgccgtcatc cgtgtcgccg atatacatac ccgggcgctt acgcaccgca tccagccctt
     3481 tcaggacttt gatactggag gagtcataag aattcgacat caacgtttct cgctcattta
     3541 tacttgggtt aatccgttat tttacccttt tccacggtaa acatcttcga attttcgtcc
     3601 gacatgtcta taacgtgttc agcactgatc gcgctgacaa agacctgtga ttgcgtcgct
     3661 tttaagcggc tggcaagcag cccgcgacgc tcatcatcaa gctcagaggc aaaatcatct
     3721 atcaggtaga gacaccgccg cccgctttca cgggtgagga actctccttg cgccagacgt
     3781 aaggcgcaca tcaacagctt aagctgccca cgcgataagg tatcttccac cggcgcaccg
     3841 tcggcgcgaa tgcgtaagtc cgctttatgc gggccatgcg cggtgtaggt tagctggcga
     3901 tcgcgttcaa aattacgttc cagcacctca gcatattctg tctctttctc ccagccgcgc
     3961 tggaaagaga aagtcagaga aaactcaggg agaaattgct tacaagtatc ggccatatca
     4021 gccgcgatac cggcgctata ctccgcgcgc caggtgctga tttgctccac cagcgggatc
     4081 agctctttat cccacgggcg tagctgttcg taacgtgtca cctggcgcag cgccgcattg
     4141 cgctgcttga gcaatcgctt gagattgctc caggcggtga aaaatccggg ttcgttgtga
     4201 aagcatgccc agtcgagaaa tgctcttctg tatttggggc cgccgttgag taaagtaaac
     4261 ccttctggcg ttatcagctg catcggcatc aggtgcgcca gctccgcgac tttatgcccg
     4321 tcagtaccgt cgatgcggac tttgctgtcg ccttgtttgt ctttggttaa gccaatcgcc
     4381 gtctcgcgct cttcgccctg taatcgccca tggagaacaa atgcctcctg ctcatggcga
     4441 atgacgcgac caatctgcaa actgcgaaac gcccgaccat ggccgagcgt atagatggct
     4501 tccagcacac tggttttgcc actgccgttg gcacctacca gaaagttaaa gccgggagat
     4561 aaggcgagat ccgcggtttc gatattgcgg aaatcgcgga tcaacaagcg ggtgagggac
     4621 attacagtct cattggcatg acaacataag ccgcgctctg gctggccgca tcttcaatct
     4681 gcacgctgga aaccgaatcg gtcagcatca tgcggacgtt ttcgcatttc agcgcgttca
     4741 gaacatccag cacatagctg acgttgaagc cgatttccat ctccgcaccg ctataggtaa
     4801 cgtcgaggat ctcttccgct tcttcctgtt ccgggttgtt ggcagtgatt ttcagctggt
     4861 tttcgctgac ataaagacgt acgccgcgga atttctcgtt agagagaatt gccgcacggg
     4921 caaacgcctg cttgagcaga tcgcagccag cttccagatg tttgtccggg ttcttcggta
     4981 gaacgcggcg gtaatccggg aagcgaccat ccaccagttt ggaggtgaag ataaagtcgc
     5041 caacgtgggc acgaatgtta ttgctgccaa tctgcacgcg cagcggattg tcgccgccgt
     5101 cgagcatacg catcagttca atcacgcctt tacgcggcac gatcaccgaa tggcttggca
     5161 aagattgacc aattggcatt gaacagactg ccagacggtg accatcggtc gctacggtgc
     5221 gcagttcttc gccttcggtt tcaaacagca taccgtttaa gtaatagcga acatcctgat
     5281 gcgccatcga aaactgggtc gcttcaatca gacgcttcat cgtcgcctgc ggcagggtaa
     5341 attcgacttc gctctgccag tcatcgaggt tcgggaaatc cgccgctggc agggtagaca
     5401 gcgaaaaacg gctacgcccg gagcgcacca gcatccgttc accttccagc tgcacggcaa
     5461 tttccgcgcc ttcaggcaga ccacggcaga tatcaaagaa tttgcgcgcc ggaacggtcg
     5521 ttgctcctgg ctcgtgtggc tgaaccagcg caacacgtgc caccatttcc atctcgagat
     5581 cagtaccggt cagcgacaac gtaccgtcag caacctgtaa cagcagatta ccgagaatcg
     5641 gtagcgtagg acgaccacct aacggaccgc tcacctgttg tagcggtttt aataaatgct
     5701 cacgttctac ggtaaatttc ataggtttac gatgacaatg ttctgattaa atttgaaaaa
     5761 tcttctttga tatcgtggct ctcttcacgc aactgctcga tcttacggca ggcatgaagc
     5821 accgtcgtgt ggtcacgacc accaaacgca tcgccaatct ccggcagact gtggttagtc
     5881 agctctttcg ccagcgccat cgccatctgg cgcggacgcg ccaccgagcg ggatcgacgc
     5941 ttggaaagga gatccgcgac tttgatcttg tagtactccg ccaccgtctt ctgaatattg
     6001 tcgatggtga ccagtttttc ctgcaatgcc agcaagtcgc gcagcgcctc acgcacgaag
     6061 tcgatggtga tcgcccgtcc ggtaaagttg gcattggcaa tgacgcggtt cagcgcccct
     6121 tccagctcac gtacgttaga tcgtagacgc ttggcgataa agaacgccac ttcgcccggc
     6181 aaacgaatgt cgttttcgtc ggcctttttc atcaggatcg ccacacgggt ttccagctct
     6241 ggcggttcga tcgccacagt cagtccccaa ccgaagcggg atttcaaacg atcctcaacg
     6301 ccgttgatct ctttcggata gcgatccgag gtgagaatga tctgttgatt accttccagc
     6361 agggcgttga aggtatggaa aaactcttcc tgagatcgtt ctttattagc aaaaaactga
     6421 atatcgtcga tcagcagtgc atctacggaa cggtagtagc gtttaaactc ttcgatcgcg
     6481 ttgttttgca gggctttaac catgtcctga acaaagcgct cggagtgcat ataaaccact
     6541 ttggcattcg gcttgcgcgc cataatgccg ttacccaccg catgcagcag gtgagtttta
     6601 cccagacccg tgccgccata aaggaacaac gggttatagg caccgccagg gttatccgcc
     6661 acctggcgag ccgccgcgcg cgccagttgg ttagatttac cttcaacgaa gttatcaaac
     6721 gtgtgtttga cgtttacgtt agaacgatag gtcggttctg ccggggccgg gacgttatcc
     6781 caacctgagc gcgtagaagg cgcagcacgt tgcggctgcg tttgcgccac ctgtgcaggg
     6841 gccgcgacgt tgctcgtcac tgccgcttgt ggcgtttgcg tcaccggttt ggtgccgact
     6901 tcaaaacgca gctgtggggc atccgctccg cagaaactgg ttagcagtcc attgatatta
     6961 ttaaggtact tgtcccgtac ccaatcgagg acaaaacggt ttggcgcgta cagggccagc
     7021 gtgttatcgc tcagttccgc ctgcaatggg cgtatccaca tactgaattc tgtggctggt
     7081 aactcatcct gcaatcgggc aagacactgc tgccaaagcg aaagtgacac ggcggactcc
     7141 actcgaacaa aagtcgataa tgactaaggc tgaaacattc atgattgttg acgtacgtcg
     7201 aaaagaccct gcttgagggt gacgcacgaa ccgctgtctg cggttatatg cccgatcaag
     7261 atcctgcaaa acgatcggga ccgcggatca tagcctaaac tgcgcaagag atcttctgtt
     7321 tctcacagat tttcccgatt tatccacagg actttccaga actcgctaag tgtaaacgat
     7381 cctgccgcga ggcgggcacg atttacgccg catattgaaa aatttaatga ccatagacaa
     7441 aaattggctt aatcgatcta ataaagatcc aggacgatcc ttgcgcttta cccatcagcc
     7501 cgtataatcc tccacccggc gcgccatgct ggtttccact ggtgtgaggt cgtacatttt
     7561 ccctgcgaaa aggtgcggaa aagcgcggta aataaggaaa gagaattgac tccggagtgt
     7621 acaattatta caatccggcc tctttaatca cccatggctt cggtgtccat cgtttcattt
     7681 ttcggcggat atccaataaa gccattgaat ttattcaagt ttaggtagaa atcgccatga
     7741 aacgcacttt tcaaccgtct gtactgaagc gcaaccgttc tcacggcttc cgtgctcgta
     7801 tggctactaa aaatggtcgt caggttctgg cacgtcgtcg tgctaaaggc cgcgctcgtc
     7861 tgaccgtttc taagtaataa agctaacccc tgagtggtta agctcgcatt tcccagggag
     7921 ttacgcttgt taactcccag tcaattcaca ttcgtcttcc agcagccaca acgggctggc
     7981 acgccgcaaa ttaccattct cggccgcctg aattcgctgg ggcatccccg tatcggtctt
     8041 acagtcgcca agaaaaacgt tcgacgcgcc catgaacgca atcggattaa acgtctgacg
     8101 cgtgaaagct tccgtctgcg ccaacatgaa ctcccggcta tggatttcgt ggtggtggcg
     8161 aaaaaagggg ttgccgacct cgataaccgt gctctctcgg aagcgttgga aaaattatgg
     8221 cgccgccact gtcgcctggc tcgcgggtcc tgatagccct cattcgggtc tatcaacgcc
     8281 tgattagtcc gctactcggg ccgcattgtc gtttcactcc aacctgttca agctacggaa
     8341 ttgaggcatt gcgcaggttt ggagtgataa aaggcagttg gttgacggtg aaacgcgtat
     8401 taaaatgcca ccctttacac cctggtggtg acgatcccgt cccgcccgga ccatttgata
     8461 ccagagaaca ctaacgatgg attcgcaacg caatctttta gtcatcgctt tgctgttcgt
     8521 gtctttcatg atctggcaag cctgggagca ggataaaaac ccgcaacctc aggcccaaca
     8581 gaccacgcag acaacgacca ccgcagcggg tagcgccgcc gaccagggcg taccggccag
     8641 tggccagggg aaactgatct cggttaagac cgacgtgctt gatctgacca tcaacacccg
     8701 tggtggtgat gttgagcaag ctctgctgcc tgcttacccg aaagagctga actctaccca
     8761 gccgttccag ctgctggaaa cttcaccgca gtttatttat caggcacaga gcggtctgac
     8821 cggtcgtgat ggcccggata acccggctaa cggcccgcgt ccgctgtata acgttgaaaa
     8881 agacgcttat gtgctggctg aaggtcaaaa cgaactgcag gtgccgatga cgtataccga
     8941 cgcggcaggc aacacgttta ccaaaacgtt tgtcctgaaa cgtggtgatt acgctgtcaa
     9001 cgtcaactac aacgtgcaga acgctggcga gaaaccgctg gaaatctcca cctttggtca
     9061 gttgaagcaa tccatcactc tgccaccgca tctcgatacc ggaagcagca acttcgcact
     9121 gcacaccttc cgcggcgcgg cgtactccac gcctgacgag aagtacgaga aatacaagtt
     9181 cgataccatt gccgataacg aaaacctgaa catctcttcg aaaggtggtt gggtggcaat
     9241 gctgcaacag tatttcgcga cggcgtggat cccgcataac gacggtacca acaacttcta
     9301 taccgctaat ctgggtaacg gcatcgccgc tatcggctat aaatctcagc cggtactggt
     9361 tcagcctggt cagactggcg cgatgaacag caccctgtgg gttggcccgg aaatccagga
     9421 caaaatggca gctgttgctc cgcacctgga tctgaccgtt gattacggtt ggttgtggtt
     9481 catctctcag ccgctgttca aactgctgaa atggatccat agctttgtgg gtaactgggg
     9541 cttctccatt atcatcatca cctttatcgt tcgtggcatc atgtacccgc tgaccaaaac
     9601 gcagtacacc tccatggcga agatgcgtat gctgcagccg aagattcagg caatgcgtga
     9661 gcgtctgggc gatgacaaac agcgtatcag ccaggaaatg atggcgctgt acaaagctga
     9721 gaaggttaac ccgctgggcg gctgcttccc gctgctgatc cagatgccaa tcttcctggc
     9781 gttgtactac atgctgatgg gttccgttga actgcgtcag gcaccgtttg cactgtggat
     9841 ccacgacctg tcggcacagg acccgtacta catcctgccg atcctgatgg gcgtaacgat
     9901 gttcttcatt cagaagatgt cgccgaccac agtgaccgac ccgatgcagc agaagatcat
     9961 gacctttatg ccggtcatct tcaccgtgtt cttcctgtgg ttcccgtcag gtctggtgct
    10021 gtactatatc gtcagcaacc tggtaaccat tattcagcag cagctgattt accgtggtct
    10081 ggaaaaacgt ggcctgcata gccgcgagaa gaaaaaatcc tgattcggtg agttttcgct
    10141 aaaataaggg cggtcagttg accgcctttt ttcttttcgt agggcggata agcaccgcgc
    10201 atccgccaca caaagcaaca ggaacatcat gagcgataat gacactatcg tagcccaggc
    10261 cacgcctccg ggacgtggcg gcgttggcat cctgcgcatc tccggcttca aagcccgtga
    10321 agttgccgaa accgtgctgg gtaaactgcc taagccgcgc tacgccgatt atcttccgtt
    10381 taaagacgcc gacggcagcg tgctcgatca ggggattgcg ctatggttcc ctggcccgaa
    10441 ctcgttcacc ggcgaagatg tgctggaact gcaaggtcat ggcggtccgg tgatcctcga
    10501 cctgctgtta aaacgcattc tgaccattcc cggcctgcgg attgctcgcc ctggtgagtt
    10561 ttccgaacgc gcgtttctta acgataaact tgacttagcc caggccgagg cgattgccga
    10621 tcttatcgac gccagttcgg aacaggcggc ccgttcggca cttaactcgc tgcaaggcgc
    10681 attctccgca cgggttaatc atctggtaga agccctcacc cacttgcgca tttacgtcga
    10741 agcggcaatt gatttccccg atgaagagat cgatttcctc tccgacggaa aaattgaagc
    10801 ccagctcaat gacgttattg ccgatcttga tgcagtgcgt gctgaagcac gtcagggtag
    10861 tttgttgcgc gaagggatga aagtggtgat tgccggacgt cctaacgccg gtaaatcgag
    10921 cctgttaaac gcgctggcgg ggcgtgaagc ggcaatcgta accgatatcg ccggaactac
    10981 gcgtgacgtg ctgcgtgagc atatccacat tgacggaatg ccgctgcata tcatcgatac
    11041 cgccgggcta cgtgaagcca gtgacgaagt agaacgtatt ggtatcgagc gcgcgtggca
    11101 ggaaattgaa caggccgacc gcgtgctgtt tatggtcgat ggcaccacaa cagacgccgt
    11161 ggatccggca gagatctggc cggaatttat tgcccgtctg ccagcgaaac tgccgatcac
    11221 cgtggtgcgc aataaagccg atatcaccgg cgaaacgctg ggaatgagtg aagtgaacgg
    11281 tcacgcgtta attcgtctct cggcaaggac tggtgaaggc gtggacgtgc tgcgtaacca
    11341 tctcaaacag agcatgggct ttgacaccaa catggaaggc ggcttcctgg cgcgtcgtcg
    11401 ccacctacag gcgctggaac aggcagcgga acatctacaa cagggcaaag cgcaactgtt
    11461 gggagcctgg gcaggtgaac tgctggcgga agagttgcgt ctggcacagc agaacttaag
    11521 cgaaatcacc ggggaattta cttcagacga cctgctgggg cggattttct ccagcttctg
    11581 tattggtaag taaccgcgct tacgaagccg tattctgact gtcagatgcg gcttcgcttc
    11641 attgttagca ctcctgttat tcctcaaccc tttttttaaa cattaaaatt cttacgtaat
    11701 ttataatctt aaaaaaagca tttaatattg ctccccgaac gattgtgatt cgattcacat
    11761 ttaaacaatt ttagaataga caaaattctt gagtattata ctgtagcctc gtgtctttcg
    11821 aggaataagt gcattatgaa tatcttacat atatgtgtga cctcaaaatg gttcaatatc
    11881 gac
//
LOCUS       DADMJE010000129        11848 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.130, whole genome shotgun sequence.
ACCESSION   DADMJE010000129 DADMJE010000000
VERSION     DADMJE010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11848)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11848)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11848
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.130"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            540..1196
                     /gene="pphA"
                     /locus_tag="JN001_003100"
     CDS             540..1196
                     /gene="pphA"
                     /locus_tag="JN001_003100"
                     /EC_number="3.1.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416352.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-serine/threonine phosphatase"
                     /protein_id="HAY9054257.1"
                     /translation="MKQPAPVYQRIAGHQWRHIWLSGDIHGCLEQLRRKLWHCRFDPW
                     RDLLISVGDVIDRGPQSLRCLQLLEQHWVCAVRGNHEQMAMDALASQQMSLWLMNGGD
                     WFIALADNQQKQAKTALEKCQHLPFILEVHSRTGKHVIAHADYPDDVYEWQKDVDLHQ
                     VLWSRSRLGERQKGQGITGADHFWFGHTPLRHRVDIGNLHYIDTGAVFGGELTLVQLQ
                     "
     gene            complement(1197..1472)
                     /locus_tag="JN001_003101"
     CDS             complement(1197..1472)
                     /locus_tag="JN001_003101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebW family protein"
                     /protein_id="HAY9054258.1"
                     /translation="MAGYLSWLFPRCKISPKLNGTAPHFGDEMFALVLFVCYLDGGCE
                     DIVVDVYNTEQQCLYSMSDQRIRQGGCFPIEDFIDGFWRPAQEYGDF"
     gene            complement(1493..1729)
                     /locus_tag="JN001_003102"
     CDS             complement(1493..1729)
                     /locus_tag="JN001_003102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707284.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1480 family protein"
                     /protein_id="HAY9054259.1"
                     /translation="MKTSVRIGAFEIDDGELHGESPGDRTLTIPCKSDPDLCMQLDAW
                     DAETSIPALLNGEHSVLYRTRYDQQSDAWIMRLA"
     gene            complement(1847..3286)
                     /gene="rsmF"
                     /locus_tag="JN001_003103"
     CDS             complement(1847..3286)
                     /gene="rsmF"
                     /locus_tag="JN001_003103"
                     /EC_number="2.1.1.178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1407)-C(5))-methyltransferase
                     RsmF"
                     /protein_id="HAY9054260.1"
                     /translation="MAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVN
                     TLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEA
                     SSMLPVAALFADGNAPQRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHA
                     NISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESN
                     QEIAATQRELIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKETYPDAVEFLPLGD
                     LFPGANKALTEEGFLHVFPQIYDCEGFFVARLRKTQAIPALPAPKYKVGNFPFSPVKD
                     REAGQIRQAAAGVGLNWDENLRLWQRDKELWLFPVDIEALIGKVRFSRLGIKLAETHN
                     KGYRWQHEAVIALATPDNVNAFELTPQEAEEWYRGRDVYPQAAPVADDVLVTFQHQPI
                     GLAKRIGSRLKNSYPRELVRDGKLFTGNA"
     gene            complement(3366..5999)
                     /gene="yebT"
                     /locus_tag="JN001_003104"
     CDS             complement(3366..5999)
                     /gene="yebT"
                     /locus_tag="JN001_003104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416348.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-binding membrane homeostasis protein YebT"
                     /protein_id="HAY9054261.1"
                     /translation="MSQETPASTTEAQIKNKRRISPFWLLPFIALMIAGWLIWDSYQD
                     RSNTVTIDFMSADGIVPGRTPVRYQGVEVGTVQDISLSDDLRKIEVKVSIKSDMKDAL
                     REETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGTGKEQDHFVALDTQPKYRLNNGD
                     LMIHLQAPDLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKG
                     SRFWNVSGVDANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTFGLYEDLAH
                     SQRGVIIKLELPSGAGLTADSTPLMYQGLEVGQLTKLDLNPGGKVTGEMTVDPSVVTL
                     LRENTRIELRNPKLSLSDANLSALLTGKTFELVPGDGEPRKEFVVVPGEKALLHEPDV
                     LTLTLTAPESYGIDTGQPLILHGVQVGQVIDRKLTSKGVTFTVAIEPQHRELVKGDSK
                     FVVNSRVDVKVGLDGVEFLGASASEWINGGIRILPGDKGEMKASYPLYANLEKALENS
                     LSDLPTTTVSLSAETLPDVQAGSVVLYRKFEVGEVITVRPRANAFDIDLHIKPEYRNL
                     LTSNSVFWAEGGAKVQLNGSGLTVQASPLSRALKGAISFDNLSGASASQRKGDKRILY
                     ASETAARAVSGQITLHAFDAGKLAVGMPIRYLGIDIGQIQTLDLITARNEVQAKAVLY
                     PEYVQTFARGGTRFSVVTPQISATGVEHLDTILQPYINVEPGRGNPRRDFELQEATIT
                     DSRYLDGLSIIVEAPEAGSLGIGTPVLFRGLEVGTVTGMTLGTLSDRVMIAMRISKRY
                     QHLVRNNSVFWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGK
                     HFLLQESEPKEWREWGTALPK"
     gene            complement(5968..7251)
                     /gene="yebS"
                     /locus_tag="JN001_003105"
     CDS             complement(5968..7251)
                     /gene="yebS"
                     /locus_tag="JN001_003105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane integrity lipid transport subunit YebS"
                     /protein_id="HAY9054262.1"
                     /translation="MALNTPQITPTKKITVRSIGEELPRGDYQRCPQCDMLFSLPEIN
                     SHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANV
                     MQGIWQMTKQGDTITGAMVFFCVIGAPLILVSSIAYLWFGNRLGMNLRPVLLMLERLK
                     EWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERYY
                     PQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVL
                     LLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFT
                     LLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAA
                     FYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD"
     gene            7381..7878
                     /locus_tag="JN001_003106"
     CDS             7381..7878
                     /locus_tag="JN001_003106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HAY9054263.1"
                     /translation="MNKTEFYADLNRDFNALMAGETSFLATLANTSALLYERLTDVNW
                     AGFYLLEDDTLVLGPFQGKIACVRIPVGRGVCGTAVARNQVQRIEDVHAFDGHIACDA
                     ASNSEIVLPLVVKNQIIGVLDIDSTVFGRFTDEDEQGLRQLVAQLEKVLATTDYKKFF
                     ASVAG"
     gene            7975..8673
                     /gene="proQ"
                     /locus_tag="JN001_003107"
     CDS             7975..8673
                     /gene="proQ"
                     /locus_tag="JN001_003107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707288.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone ProQ"
                     /protein_id="HAY9054264.1"
                     /translation="MENQPKLNSSKEVIAFLAERFPHCFSAEGEARPLKIGIFQDLVD
                     RVAGEMNLSKTQLRSALRLYTSSWRYLYGVKPGATRVDLDGNPCGELDEQHVEHARKQ
                     LEEAKARVQAQRAEQQAKKREAAAAAGEKEDAPRRERKPRPTTPRRKEGAERKPRAQK
                     PVEKAPKTVKAPREEQHTPVSDISALTVGQALKVKAGQNAMDATVLEITKDGVRVQLN
                     SGMSLIVRAEHLVF"
     gene            8693..10741
                     /gene="prc"
                     /locus_tag="JN001_003108"
     CDS             8693..10741
                     /gene="prc"
                     /locus_tag="JN001_003108"
                     /EC_number="3.4.21.102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy terminal-processing peptidase"
                     /protein_id="HAY9054265.1"
                     /translation="MNMFFRLTALAGLLAIAGQTFAVEDITRADQIPVLKEETQHATV
                     SERVTSRFTRSHYRQFDLDQAFSAKIFDRYLNLLDYSHNVLLASDVEQFAKKKTELGD
                     ELRSGKLDVFYDLYNLAQKRRFERYQYALSVLEKPMDFTGNDTYNLDRSKAPWPKNEA
                     ELNALWDSKVKFDELSLKLAGKTDKEIRETLTRRYKFAIRRLAQTNSEDVFSLAMTAF
                     AREIDPHTNYLSPRNTEQFNTEMSLSLEGIGAVLQMDDDYTVINSMVAGGPAAKSKAI
                     SVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAGKGTKTRTVTLT
                     RERIRLEDRAVKMSVKTVGKEKVGVLDIPGFYVGLTDDVKVQLQKLEKQNVSSVIIDL
                     RSNGGGALTEAVSLSGLFIPAGPIVQVRDNNGKVREDSDTDGQVFYKGPLVVLVDRFS
                     ASASEIFAAAMQDYGRALVVGEPTFGKGTVQQYRSLNRIYDQMLRPEWPALGSVQYTI
                     QKFYRVNGGSTQRKGVTPDIIMPTGNEETETGEKFEDNALPWDSIDAATYVKSGDLTA
                     FGPELLKEHNARIAKDPEFQNIMKDIARFNAMKDKRNIVSLNYAVREKENNEDDATRL
                     ARLNERFKREGKPELKKLDDLPKDYQEPDPYLDETVNIALDLAKLEKARPAEQPAPVK
                     "
     gene            10933..11814
                     /gene="htpX"
                     /locus_tag="JN001_003109"
     CDS             10933..11814
                     /gene="htpX"
                     /locus_tag="JN001_003109"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014229823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease HtpX"
                     /protein_id="HAY9054266.1"
                     /translation="MMRIALFLLTNLAVMVVFGLVLSLTGIQSSSVQGLMIMALLFGF
                     GGSFVSLLMSKWMALRSVGGEVIEQPRNERERWLVNTVATQARQAGIAMPQVAIYHAP
                     DINAFATGARRDASLVAVSTGLLQNMSPDEAEAVIAHEISHIANGDMVTMTLIQGVMN
                     TFVIFISRILAQLAAGFMGGNRDEGEESNGNPLIYFAVATVLELVFGILASIITMWFS
                     RHREFHADAGSAKLVGREKMIAALQRLKTSYEPQEATSMMAFCINGKSKSLSELFMTH
                     PPLDKRIEALRTGEYLK"
BASE COUNT         3051 a         2918 c         3054 g         2825 t
ORIGIN      
        1 ctgcttaaaa aaagaacaaa tggtagtgtc cgctattgcc agtacacctc agtcgcaacc
       61 ccaaatcgta aaggaaaccg tagcacgtcg tatgcaagaa cgtgccacgg ctggctgatg
      121 gatgttcgat agcgcgagtt tgaatgaaaa tcagccggag atgattttac ataattgcta
      181 cggaattatt caatacagga attgcttgcg tctgcatgga ttgacctgaa attttcccga
      241 aaatttctct aaaaaactcg aaaaaaatgg taactggttg aatgtattaa tatgcaatgg
      301 tacgtgtcag ggattaaaag atgaacgtaa atttattcaa cgcattaatt ttaaagggtt
      361 ttattgtttg ttgacgaaaa caggaatcgt gttcggtctc tttttatctg ttaaaagcca
      421 gaagcatttc cttcgctgac tttatagtca accataacac acactctact gtctgagtcc
      481 agcgtttttt aacattcttg ttaagattat gtgatcttta gcacgggagg aaaatattga
      541 tgaaacagcc tgcgcccgtt tatcagagaa ttgcgggtca tcaatggcga catatctggc
      601 tttctggcga tatacacggt tgtcttgagc agttgcgccg caaattatgg cattgtcgtt
      661 ttgatccgtg gcgagattta cttatctcag tgggagacgt tatcgatcgt gggccgcaaa
      721 gtttacgttg tctgcagtta ctggaacaac attgggtttg tgcggtaaga ggcaatcatg
      781 aacagatggc gatggatgcg ctggcatccc agcagatgtc tttgtggttg atgaatggcg
      841 gcgactggtt tattgcgctg gcagataatc aacagaaaca agcgaaaacg gcgctggaaa
      901 aatgtcagca tttgcccttt attcttgaag tacacagtcg caccggcaag catgttattg
      961 ctcatgcgga ttatccagat gatgtttatg aatggcaaaa ggacgttgat ttgcatcagg
     1021 tcttgtggag ccgctcgcga ttaggtgaac gccaaaaagg gcagggaatt acaggtgctg
     1081 atcatttctg gtttggtcat acaccgttgc gacatcgcgt ggatattggc aacctgcatt
     1141 atattgatac cggtgctgtc tttgggggcg aactgactct tgtgcaattg caatgattaa
     1201 aaatcaccgt actcctgtgc aggtcgccag aaaccatcta taaaatcctc aatcggaaaa
     1261 caaccgccct ggcggatccg ttgatcgctc atagaataaa gacactgctg ttccgtgttg
     1321 tagacatcca caacaatatc ttcacaaccg ccatccaggt agcaaacaaa aagtaccagc
     1381 gcgaacattt catccccgaa gtgtggtgcc gtaccgttaa gtttaggaga gattttacaa
     1441 cgggggaata accaggacaa ataacccgcc atgccgacgg gttctttttg gatcaggcaa
     1501 gacgcataat ccaggcatca gattgttgat cgtaacgggt acggtaaagg acagagtgtt
     1561 cgccatttag cagggcaggg atactggttt cagcatccca ggcatcgagt tgcatacata
     1621 aatcggggtc agatttacaa ggaatggtta acgttcgatc acccggcgat tcaccgtgta
     1681 attcgccgtc gtcgatttca aaagcgccta tgcgcacact ggttttcatc ttcgtgctct
     1741 ccatttagct gccggttgtg gtacgaccag tccgatcgca ccatttttca gcctagttga
     1801 ggcagccgaa tgtgccagtc aaaaagtgcg ctttttttgt gcgctgtcag gcgttaccgg
     1861 taaaaagttt cccatcgcgc accagttcac gcggatagct gtttttcaat cgcgaaccaa
     1921 tccgtttggc taaaccaatc ggttgatgct ggaaagtaac caacacgtca tccgccactg
     1981 gcgcggcttg cgggtaaaca tcgcgcccgc gataccactc ctccgcttcc tgcggtgtca
     2041 gttcaaaagc gttcacattg tcgggggtgg caagggcaat aactgcttca tgctgccagc
     2101 gataaccttt gttgtgcgtt tcggcaagtt taatccccaa gcgagaaaat cggactttac
     2161 cgatcagggc ttcaatgtcc accgggaaca accacagttc tttgtcacgc tgccagaggc
     2221 gcaggttttc atcccagttt aagccaacac ctgcagccgc ctggcgaatt tgtccagctt
     2281 cgcgatcttt caccgggctg aacggaaaat taccgacttt gtatttgggg gcgggtaagg
     2341 cgggaatcgc ctgagtttta cgcagacgag caacgaagaa gccttcgcag tcgtaaattt
     2401 gtgggaaaac atgcaaaaag ccttcttcgg tcagcgcttt gtttgcacca gggaagagat
     2461 cgccaagtgg taaaaactct actgcgtcgg ggtaagtctc tttcagccac aggcaaacgg
     2521 cttcgttttc ttcctggttt aaggtacagg tcgagtaaac cagcgtacca ccaggacgta
     2581 atgcatgaaa ggcgctgtcg ataagctccc gttgtgtagc tgcgatttcc tgattgcttt
     2641 ctggtgacca gttttttagc gcatcgggat ctttacgcac cacgccttcg ccggagcagg
     2701 gagcgtccag caaaatggca tcaaacattt ctggcactgc cgcaccaaac acgcggccat
     2761 caaaatgtgt gagcgcaaca ttactgatgc cacagcggct gatattggca tgtaacactt
     2821 ttacccgact ggcggaaaac tcattggcaa ggattgcccc ttcgttattc atccgcgcgg
     2881 caatttgcgt cgtttttgag cctggcgcag cagcgacatc catcacccgc tgtggtgcat
     2941 taccgtcagc aaacaaggcg gcgacgggca acattgaact ggcttcctga atataaaaca
     3001 ggccacttaa atgctcggcg gtactaccca atggcaatgc atcttcattg tcgcgttcaa
     3061 tccagaaacc ttcttcacac cacggaattg gcgtaagcgt ccagccataa ggagcggtta
     3121 attgcaggaa atcagcaacg gagattttca gcgtattaac gcgaatgctg cggcgcaacg
     3181 ggcgctgaca ggcggcaaga aaatcatcaa atgagagcgt cgaaggcata gcttcgcgca
     3241 tttgtgtcag aaacgcgtcc gggaaataaa cggtgtgttg ggccacgagc atgtaccact
     3301 ggcaaaaaaa caggcgcgca gtttagcata aacgctccgg cgcaggcacg ccggagcagt
     3361 gggcattatt tgggaagcgc agttccccat tcacgccact ctttcggttc actttcctgc
     3421 aacaggaagt gtttgccttc ctgggctttc ggtgccagtg gcgtacccgg aggcgtggcg
     3481 aaggcgatgc cgccacggat aaactggtta aaggtgccgg ttttcactac gccgcccgtc
     3541 agaccaaagt ccagactgta acccgatgcc aaccagaaga cggaattgtt acgcaccagg
     3601 tgttgatagc gtttactgat gcgcatcgca atcatcacgc gatctgacaa tgtccccagc
     3661 gtcattccgg taaccgtacc tacttccaga ccacggaaca gcacaggcgt accaatacct
     3721 aacgaaccgg cttccggtgc ttcgacaata atgcttaagc catccaggta acgcgaatca
     3781 gtaatagtag cttcttgcaa ctcaaagtca cggcgaggat taccccgacc tggttcgaca
     3841 ttgatatacg gctggaggat agtatctaga tgctcaacgc ccgtggctga aatttgcggt
     3901 gtgaccaccg agaagcgcgt accgccgcgg gcgaaggtct ggacatactc cggatagagc
     3961 accgcctttg cctgtacttc attgcgcgcg gtaatcagat ccagcgtctg gatttgcccg
     4021 atatcaatac cgagatagcg aattggcatc ccgaccgcca gttttccggc atcgaaagcg
     4081 tgaagcgtaa tctgcccact aaccgcacgg gccgctgttt cggaagcata cagaattcgt
     4141 ttgtcgcctt tacgctgact ggcgctggca ccgctgaggt tatcgaagct aatggctccc
     4201 tttaatgctc tggagagcgg ggatgcctgt acggtcaggc cactaccatt cagctgaact
     4261 ttcgccccgc cttctgccca gaacacgcta ttgctggtca gaaggttgcg atactccggc
     4321 ttaatatgca gatcgatatc aaacgcgtta gctcgcggac gcacggtaat cacttcacca
     4381 acttcaaatt tacggtacag cactaccgat cctgcctgca catccggcag cgtctctgca
     4441 ctcaaactca cggttgtggt gggtaaatcg ctaaggctgt tctccagcgc tttttccaga
     4501 ttggcataca gtggatagct ggctttcatc tcacctttat cgcctggcag aatacgtatc
     4561 ccgccgttaa tccattctga ggcgctggca ccaagaaact caacgccatc cagccccacc
     4621 ttcacgtcga cacggctgtt gacgacaaat ttgctatcgc cttttaccag ttcgcgatgc
     4681 tgaggctcga tggcgacggt aaaggtaacg cctttgctgg tgagtttacg atcaataacc
     4741 tggcctacct gcacgccgtg aagaatgagc ggctgacccg tatcaatacc gtaactttcc
     4801 ggcgcggtca gggtcagcgt cagaacatca ggttcatgca gcagtgcttt ttcgcctggc
     4861 acaacaacga actctttgcg tggctcgcca tcgccgggta ccaactcgaa ggttttgcca
     4921 gtcagcaggg cgctgagatt ggcatcgcta agggataatt tcggattacg taattcgatg
     4981 cgggtatttt cacgaagcag ggtaacgacg ctgggatcaa ctgtcatttc cccagtgact
     5041 ttaccaccag gatttaaatc cagtttagtt agctgtccga cttccagtcc ctgatacatt
     5101 aatggcgtcg agtcggcggt taatccggcc ccactcggca gttccagttt gattattacg
     5161 ccacgctggc tatgggcgag gtcttcatac agaccaaagg tatcttccgc ctcggcaggt
     5221 ttcgactctt ctggtgaatc gaaggcaatc gcaccgttaa ccagtgccgc caggctttcc
     5281 agtttcacct tcgcgccact gatactgaca ttggcatcaa cgccggaaac gttccagaaa
     5341 cggctacctt ttttcaccag atcggtaaaa cgccgctcga tcaggacatc aatcaccacg
     5401 ccttgtttgt tgggattgat ggcatagtcg tagacttttc ccaccgggat cttgcggaaa
     5461 tagaccaatg aaccgctgtt cagcgaaccg agatcggggg cttgcaggtg gatcatcaga
     5521 tcgccattgt tcagccgata tttcggttgg gtatcgagtg cgacaaagtg atcctgctct
     5581 ttacctgtac ccggcatcat gccgatatag ttcccaccga cgagggcgtc cagcccggag
     5641 acacctgcca acgatgcttt tggcgtcacc agccagaatt gagtctcttc gcgcagcgca
     5701 tctttcatat cggacttgat gctgaccttg acttcaatct tacgaagatc gtcgctgagg
     5761 ctgatatcct gcactgttcc gacttcaacg ccctgataac gaacaggcgt acggcccggg
     5821 acaataccat ccgccgacat aaagtcgatg gtgacggtat tacttcggtc ctgataactg
     5881 tcccaaatca gccaaccggc aatcattagc gcgatgaaag gcagcagcca gaaaggtgag
     5941 atacggcgtt tatttttaat ctgcgcttca gtcgtcgaag cgggcgtttc ctgactcatg
     6001 tgcatcccaa agtaagcggc tgtccagcca ttccacagca agaatagtca aaattacggc
     6061 tgcgccaaaa taaaacgcag ccggtcccat agtaaaagcg aggatctgat cgcgattaat
     6121 cagcgacatg gttaaagata tgacaaacag gtcgagcatc gaccagcgtc caatccaggt
     6181 caccatccgc agtaacagaa tgcgtgtgcg taaaccttgc tggcatttaa aatgaatgct
     6241 caacagtaaa gtgaacatga cgatcacttt agtaaacggt accagaatac tggcgataaa
     6301 cacgattccg gcgaccgcaa tgttgctact tgccagcgac ataatcccgg aaagaatcgt
     6361 atcttcctgc cggccaccat tcagataaat gatagaaata ggcaataggt tggctggtaa
     6421 caacaaaacg attgacgcta acagcgccgc ccagcatttt tgcaaactat gacgacgacg
     6481 caggcgtagc gggatatggc aacgcgggca gcgaccacgc tgatcaggat agccggtaaa
     6541 atggcaccca agacagacac gaagtttctc gtccctacgc gtagcggggc gctgcggata
     6601 atatcgctcc cacagctcct caacattaag atgtgacaac gtcaccgtcg ttaaaatcac
     6661 caacgccaca aaagagaaca agccgacacc cgcctggata tgggcataat cctgtacctt
     6721 tatagaagca acgccaatgc cgaccaggta gatatccagc attacccact ctttaagacg
     6781 ctcaagcatc agcagtaccg gacgtaaatt cattcccagt cggttaccaa accataaata
     6841 tgctatggag gacaccagaa tgaggggggc accaataacg cagaaaaaga ccatcgcccc
     6901 cgttatcgta tcgccctgtt tggtcatttg ccagatgcct tgcatgacgt ttgcgtcgat
     6961 acgaatacct aacagccaga tatgcaacag cggttcgccc caggcaaacg gcatcagcaa
     7021 cagcatggtg aaagccattg ccgccaggcg cgttagcgac cagtcgcgcc cgtcgcgaat
     7081 ttttgcctga cagcgcggac aataggcact ctgatgagaa tttatctcgg gcaggctaaa
     7141 cagcatgtca cattgcgggc aacgttggta atcaccacgc ggcagttcct cgccgattga
     7201 cctcactgtt atcttttttg tcggcgtaat ttgtggtgtg ttaagagcca tgacgtgcca
     7261 aatgtaataa gaattaacat taatcttaac ccatgatggg aatgatcttg agcattaacg
     7321 catttaatgc ttattttaat aggctggcag ttccaggtaa gacaaacaag tgattatata
     7381 atgaacaaaa cagaatttta cgcggattta aatcgcgact ttaacgcgct gatggcggga
     7441 gaaaccagtt ttctggcaac gcttgcgaac accagtgcgt tgttatacga gcgtctcact
     7501 gacgtaaact gggcaggttt ttatttgctt gaggacgata cactggtact cggaccattt
     7561 cagggcaaaa ttgcctgtgt ccggataccc gtcgggcgcg gggtgtgcgg cactgcggtt
     7621 gcccgcaatc aagtgcagcg tatcgaggat gttcacgcgt ttgacgggca tattgcctgt
     7681 gatgcggcga gtaattctga aattgttctg ccgctggtgg tgaaaaatca gattattggt
     7741 gttcttgaca tcgatagtac cgtcttcggt cgctttacag acgaggacga gcaaggctta
     7801 cgtcagcttg tggcacagct tgaaaaagtg cttgcaacga cggattacaa aaaattcttt
     7861 gcgagcgtcg caggataatc aacggataac gtagcattta ctggtagcgt cattataatg
     7921 acgcctgttc atgcctgcgc ttgttggcta cgtccgttgt aatcaggaaa tttcatggaa
     7981 aatcaaccta agttgaatag cagtaaagaa gtaatcgcgt ttctggccga acgttttccc
     8041 cactgtttca gtgcggaagg tgaagcgcgt ccgctgaaaa tcggtatttt tcaggatttg
     8101 gtcgatcgtg ttgccgggga aatgaacctg agcaaaacgc aattacgatc cgctttacgt
     8161 ctctacactt cgagctggcg ttatctttac ggtgttaaac ccggcgcaac gcgtgtcgat
     8221 cttgacggca acccatgcgg tgagctggac gagcaacatg tagagcatgc tcgcaagcag
     8281 cttgaagaag cgaaagcgcg tgttcaggca cagcgtgctg aacagcaggc gaaaaaacgc
     8341 gaagctgccg cagctgctgg tgagaaagaa gacgcaccgc gccgcgaacg caagccacgt
     8401 ccgaccacgc cacgccgcaa agaaggcgct gaacgtaaac ctcgtgcgca aaagccggta
     8461 gagaaagcgc caaaaacagt aaaagcacct cgcgaagaac agcacacccc ggtttctgac
     8521 atttcagctc tgactgtcgg acaagctctg aaggtgaaag cgggtcaaaa cgcgatggat
     8581 gccaccgtat tagaaatcac caaagacggc gtccgcgtcc agctgaattc gggtatgtct
     8641 ttgattgtgc gcgcagaaca cctggtgttc tgaaacggag gccgggccag gcatgaacat
     8701 gttttttagg cttaccgcgt tagctggcct gcttgcaata gcaggccaga ccttcgctgt
     8761 agaagatatc acgcgtgctg atcaaattcc ggtattaaag gaagagacgc agcatgcgac
     8821 ggtaagtgag cgcgtaacgt cgcgcttcac ccgttctcat tatcgccagt tcgacctcga
     8881 tcaggcattt tcggccaaaa tctttgaccg ctacctgaat ctgctcgatt acagccacaa
     8941 cgtgctgctg gcaagcgatg ttgaacagtt cgcgaaaaag aaaaccgagt taggcgatga
     9001 actgcgttca ggcaaactcg acgttttcta cgatctctac aatctggcgc aaaagcgccg
     9061 ttttgagcgt taccagtacg ctttgtcggt actggaaaag ccgatggatt tcaccggcaa
     9121 cgacacttat aaccttgacc gcagcaaagc gccctggccg aaaaacgagg ctgagttgaa
     9181 cgcgctgtgg gacagtaaag tcaaattcga cgagttaagc ctgaagctgg caggaaaaac
     9241 ggataaagaa attcgtgaaa ccctgacacg ccgctacaaa tttgccattc gtcgtctggc
     9301 gcaaaccaac agcgaagatg ttttctcgct ggcaatgacg gcgtttgcgc gtgaaatcga
     9361 cccgcatacc aactatcttt ccccgcgtaa taccgaacag ttcaacactg aaatgagttt
     9421 gtcgctggaa ggtattggcg cagtgctgca aatggatgat gactacaccg ttatcaattc
     9481 gatggtggca ggtggtccgg cagcgaagag taaagctatc agcgttggtg acaaaattgt
     9541 cggtgttggt caaacaggca agccgatggt tgacgtgatt ggctggcgtc ttgatgatgt
     9601 ggttgcctta attaaagggc cgaagggcag taaagttcgt ctggaaattt tacctgctgg
     9661 taaagggacc aagacccgca ctgtaacatt gacccgtgaa cgtattcgtc tcgaagaccg
     9721 cgcggttaaa atgtcggtga agaccgtcgg taaagagaaa gtcggcgtgc tggatattcc
     9781 gggcttctat gtgggtttga cagacgatgt caaagttcaa ctgcagaaac tggaaaaaca
     9841 gaatgtcagc agtgtgatca tcgacctgcg tagcaatggc ggtggggcgt tgactgaagc
     9901 ggtatcgctc tcaggtctgt ttattcctgc gggtcccatt gttcaggtcc gcgataacaa
     9961 cggcaaggtt cgtgaagaca gcgataccga cgggcaggtg ttctataaag gcccgctggt
    10021 ggtactggtt gaccgtttca gtgcttcggc ttcagaaatc tttgccgcgg caatgcagga
    10081 ttacggtcgt gcgctggttg tgggtgaacc gacgtttggt aaaggcaccg ttcagcaata
    10141 ccgttcattg aaccgtattt acgatcagat gttacgtcct gaatggccag cgctgggttc
    10201 tgtgcagtac acgatccaga aattctatcg cgttaacggc ggcagtacgc aacgtaaagg
    10261 cgtaacgcca gacatcatca tgccgacggg taatgaagaa acggaaacgg gtgagaaatt
    10321 cgaagataac gcgctgccgt gggatagcat tgatgccgcg acttatgtga aatcaggcga
    10381 tttaacggcc tttgggccgg agctgctgaa ggaacataat gcgcgtatcg cgaaagatcc
    10441 tgagttccag aacatcatga aggatatcgc gcgcttcaac gctatgaagg acaagcgcaa
    10501 tatcgtttct ctgaactacg ctgtgcgtga gaaagagaat aatgaagatg atgcgacgcg
    10561 tctggcgcgt ttgaacgaac gctttaaacg cgaaggtaaa ccggagttga agaagctgga
    10621 tgatctaccg aaagattacc aagagccgga tccttatctg gatgagacgg tgaatatcgc
    10681 actcgatctg gcgaagcttg aaaaagccag acccgcggaa caacccgctc ccgtcaagta
    10741 atatcaatca ggcacaagaa attgtgcctg attttttaac agcggcaaga tgccgtaaat
    10801 cagatgctac aaaatgtaaa gttgtgtctt tctggtgact tacgcactat ccagacttga
    10861 aaatagtcgc gtaacccata cgatgtgggt atcgcatatt gcgttttgtt aaactgaggt
    10921 aaaaagaaaa ttatgatgcg aatcgcgctc ttcctgctaa cgaacctggc cgtaatggtc
    10981 gttttcgggc tggtactgag cctgacaggg atacagtcga gcagcgttca ggggctgatg
    11041 atcatggcct tgctgttcgg ttttggtggt tccttcgttt cgcttctgat gtccaaatgg
    11101 atggcattac gatctgttgg cggggaagtg atcgagcaac cgcgtaacga aagggaacgt
    11161 tggctggtca atactgtagc aacccaggct cgtcaggcag ggatcgctat gccgcaagtg
    11221 gctatctacc atgcgccgga catcaacgct tttgcaaccg gtgcgcgccg tgatgcctct
    11281 ctggttgctg tcagcaccgg tttgctgcag aacatgagcc cggatgaagc cgaggcggta
    11341 attgctcacg aaatcagcca catcgccaat ggtgatatgg tcaccatgac gctgattcag
    11401 ggcgtgatga acaccttcgt tatctttatt tcccgtattc tggcgcagct tgccgcgggt
    11461 tttatgggcg gaaatcgtga tgaaggtgaa gagagcaacg gcaacccgct gatctacttt
    11521 gcggttgcaa cggttctgga actggtgttt ggtattctgg cgagcattat caccatgtgg
    11581 ttctcgcgtc atcgtgaatt ccatgctgat gccggttcgg caaaactggt tggtcgcgag
    11641 aaaatgattg ccgcgctgca gcgcctgaaa accagctatg aaccgcaaga agcaaccagc
    11701 atgatggctt tctgcattaa tggtaagtcg aaatcgctca gtgagttgtt catgactcac
    11761 ccgccgctgg ataaacgaat tgaagctctg cgtacgggtg aatacctgaa gtaatatgaa
    11821 gtaaatacta aaaagtgcgt cctgatcg
//
LOCUS       DADMJE010000130        11825 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.131, whole genome shotgun sequence.
ACCESSION   DADMJE010000130 DADMJE010000000
VERSION     DADMJE010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11825
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.131"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(37..273)
                     /locus_tag="JN001_003110"
     CDS             complement(37..273)
                     /locus_tag="JN001_003110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313355.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1435 domain-containing protein"
                     /protein_id="HAY9054267.1"
                     /translation="MLQRTLGSGWGVLLPGLLIAGLMYADLSPDQWRIVILMGLVLTP
                     VMLYHKQLRHYVLLPSCLALIAAIMLMIMNLNQG"
     gene            414..1202
                     /gene="fhuF"
                     /locus_tag="JN001_003111"
     CDS             414..1202
                     /gene="fhuF"
                     /locus_tag="JN001_003111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-iron reductase FhuF"
                     /protein_id="HAY9054268.1"
                     /translation="MAYRSAPLYEDIIWRTHLQPQDAGLAQAVRATIAKHREHLLEFI
                     RLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGL
                     MVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL
                     ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEK
                     TLTNGEDNPLWRTVVLRDGLLVRRTCCQRYRLPDVQQCGDCTLK"
     gene            complement(1240..1916)
                     /gene="bglJ"
                     /locus_tag="JN001_003112"
                     /pseudo
     CDS             complement(1240..1916)
                     /gene="bglJ"
                     /locus_tag="JN001_003112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418786.4"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional activator BglJ"
     gene            complement(1874..2599)
                     /locus_tag="JN001_003113"
     CDS             complement(1874..2599)
                     /locus_tag="JN001_003113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HAY9054269.1"
                     /translation="MLPGCCKNGIVISKIPVMQAGLKEVMRTHFPEYEIISSASAEDF
                     TLLQLRRSGLVIADLAGESEDPRSVCEHYYSLISQYREIHWVFMVSRSWYSQAVELLM
                     CPTATLLSDVEPIENLVKTVRSGNTHAERISAMLTSPAMNETHDFSYRSVILTLSERK
                     VLRLLGKGWGINQIVSLLKKSNKTISAQKNSAMRRLAIHSNAEMYAWINSAQGARELN
                     LPSVYGDAAEWNTAELRREMSHS"
     gene            3218..3988
                     /locus_tag="JN001_003114"
     CDS             3218..3988
                     /locus_tag="JN001_003114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418784.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HAY9054270.1"
                     /translation="MQTEQQRAVTRLCIQCGLFLLQHGAESALVDELSSRLGRALGMD
                     SVESSISSNAIVLTTIKDGQCLTSTRKNHDRGINMHVVTEVQHIVILAEHHLLDYKGV
                     EKRFSQIQPLRYPRWLVALMVGLSCACFCKLNKGGWDGAIITFFASTAAMYIRQLLAQ
                     RHLHPQINFCLTAFAATTISGLLLQLPTFSNTPTIAMAASVLLLVPGFPLINAVADMF
                     KGHINTGLARWAIASLLTLATCVGVVMALTIWGLRGWV"
     gene            3979..4452
                     /locus_tag="JN001_003115"
     CDS             3979..4452
                     /locus_tag="JN001_003115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418783.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter"
                     /protein_id="HAY9054271.1"
                     /translation="MGVIEFLFALAQDMILAAIPAVGFAMVFNVPVRALRWCALLGAI
                     GHGSRMILMTRGLNIEWSTFMASMLVGTIGIQWSRWYLAHPKVFTVAAVIPMFPGISA
                     YTAMISAVKISQLGYSEPLMITLLTNFLTASSIVGALSIGLSIPGLWLYRKRPRV"
     gene            4560..5099
                     /gene="dnaT"
                     /locus_tag="JN001_003116"
     CDS             4560..5099
                     /gene="dnaT"
                     /locus_tag="JN001_003116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaT"
                     /protein_id="HAY9054272.1"
                     /translation="MSSRVLTPDVVGIDALVHDHQTVLAKAEGGVVAVFANNAPAFYA
                     VTPARLAELLALEEKLARPGSDVALDDQLYQEPQAAPVAVPMGKFAMYPDWQPDADFI
                     RLAALWGVALREPVTTEELASFIAYWQAEGKVFHHVQWQQKLARSLQIGRASNGGLPK
                     RDVNTVSEPDSQIPPGFRG"
     gene            5102..5839
                     /gene="dnaC"
                     /locus_tag="JN001_003117"
     CDS             5102..5839
                     /gene="dnaC"
                     /locus_tag="JN001_003117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001731874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication protein DnaC"
                     /protein_id="HAY9054273.1"
                     /translation="MKNVGDLMQRLQKMMPAHIKPAFKTGEELLAWQKEQGAIRSAAL
                     ERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECEGQMNALSKARQYVEEFDGNIASF
                     IFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTSEEQLLNDL
                     SNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKLLGERVM
                     DRMRLGNSLWVIFNWDSYRSRVTGKEY"
     gene            5888..6382
                     /locus_tag="JN001_003118"
     CDS             5888..6382
                     /locus_tag="JN001_003118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418780.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2501 domain-containing protein"
                     /protein_id="HAY9054274.1"
                     /translation="MMETVKHLLCCAIAASALISTGVHAASWKDALSSAASELGNQNS
                     TTQEGGWSLASLTNLLSSGNQALSADNMNNAAGILQYCAKQKLASVTDAENIKNQVLE
                     KLGLNSEEQKEDTNYLDGIQGLLKTKDGQQLNLDNIGTTPLAEKVKTKACDLVLKQGL
                     NFIS"
     gene            6636..8927
                     /gene="opgB"
                     /locus_tag="JN001_003119"
     CDS             6636..8927
                     /gene="opgB"
                     /locus_tag="JN001_003119"
                     /EC_number="2.7.8.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418779.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerol--membrane-oligosaccharide
                     glycerophosphotransferase"
                     /protein_id="HAY9054275.1"
                     /translation="MSELLSFALFLASVLIYAWKAGRNTWWFAATLTVLGLFVVLNIT
                     LFASDYFTGDGINDAVLYTLTNSLTGAGVSKYILPGIGIVLGLTAVFGALGWILRHRR
                     HHPHHFGYSLLALLLALGSVDASPAFRQITELVKSQSRDGDPDFAAYYKEPSKTIPDP
                     KLNLVYIYGESLERTYFDNEAFPDLTPELGALKNEGLDFSHTQQLPGTDYTIAGMVAS
                     QCGIPLFAPFEGNASASVSSFFPQNICLGDILKNSGYQNYFVQGANLRFAGKDVFLKS
                     HGFDHLYGSEELKSVVADPHYRNDWGFYDDTVLDEAWKKFEELSRSGQRFSLFTLTVD
                     THHPDGFISRTCNRKKYDFDGKPNQSFSAVSCSQENIAAFINKIKASPWFKDTVIVVS
                     SDHLAMNNTAWKYLNKQDRNNLFFVIRGDKPQQETLAVKRNTMDNGATVLDILGGDNY
                     LGLGRSSLSGQSMSEIFLNIKEKTLAWKPDIIRLWKFPKEMKEFTIDQQKNMIAFSGS
                     HFRLPLLLRVSDKRVEPLPESEYSAPLRFQLADFAPRDNFVWVDRCYKMAQLWAPELA
                     LSTDWCVSQGQLGGQQIVQHVDKTTWQGKTAFKDTVIDMARYKGNVDTLKIVDNDIRY
                     KADSFIFNVAGAPEEVKQFSGISRPESWGRWSNAQLGDEVKIEYKHPLPKKFDLVITA
                     KAYGNNASRPIPVRVGNEEQTLVLGNEVTTTTLHFDNPTDADTLVIVPPEPVSTNEGN
                     ILGHSPRKLGIGMVEIKVVEREG"
     gene            complement(9066..10088)
                     /locus_tag="JN001_003120"
     CDS             complement(9066..10088)
                     /locus_tag="JN001_003120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418778.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HAY9054276.1"
                     /translation="MSTMNVLICQQPKELVWKQREIPIPGDNEALIKIKSVGICGTDI
                     HAWGGNQPFFSYPRVLGHEICGEIVRLGKNIADLKNGLQVAVIPYVACQQCPACKSGR
                     TNCCEKISVIGVHQDGGFSEYLSVPVANILPADGIDPQAAALIEPFAISAHAVRRAAI
                     APGEQVLVVGAGPIGLGAAAIAKADGAQVVVADTSPARREHVATRLELPLLDPSAEDF
                     DAQLRAQFGGSLAQKVIDATGNQHAMNNTVNLIRHGGTVVFVGLFKGELQFSDPEFHK
                     KETTMMGSRNATPEDFAKVGRLMAEGKITADMMLTHRYPFATLAETYERDVINNRELI
                     KGVITF"
     gene            10227..11141
                     /locus_tag="JN001_003121"
     CDS             10227..11141
                     /locus_tag="JN001_003121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313344.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY9054277.1"
                     /translation="MSRSQNLRHNVINQVIDDMARGHIPSPLPSQSALAEMYNISRTT
                     VRHILSHLRECGVLTQVGNDYVIARKPDHDDGFACTTASMSEQNKVFEQAFFTLINQR
                     QLRPGETFSELQLARAAGVSPVVVREYLLKFGRYNLIQSEKRGQWSMKQFDQSYAEQL
                     FELREMLETHSLQHFLNLPDHDPRWLQAKTMLERHRLLRDNIGNSFRMFSQLDRDFHS
                     LLLSAADNIFFDQSLEIISVIFHFHYQWDESDLKQRNIIAVDEHMTILSALICRSDLD
                     ATLALRNHLNSAKQSMIRSINENTRYAH"
     gene            11356..>11825
                     /locus_tag="JN001_003122"
     CDS             11356..>11825
                     /locus_tag="JN001_003122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054278.1"
                     /translation="MEKENITIDPRSSFTPSSSADIPVPPDGLVQRSTRIKRIQTTAM
                     LLLFFAAVINYLDRSSLSVANLTIREELGLSATEIGALLSVFSLAYGIAQLPCGPLLD
                     RKGPRLMLGLGMFFWSLFQAMSGMVHNFTQFVLVRIGMGIGEAPMNPCGVKVIN"
BASE COUNT         3070 a         3015 c         2766 g         2974 t
ORIGIN      
        1 tatctttact tcctttcttg tttcttcctt gatttttcat ccctgattca aattcattat
       61 catcagcatg atggcagcaa taagcgccag gcacgatggt agcaaaacgt aatgccgtaa
      121 ctgtttgtga tacagcatca ccggcgtcaa tactaatccc atcagaatga caatccgcca
      181 ctgatccggc gataaatccg catacatcag ccctgcaatc agcaatcccg gcagcaacac
      241 tccccagcca ctgcccagcg tacgttgcaa catggtttca tctctttcat tgataatgat
      301 aactaatatc atatgataat ttttatcatt tgcaagccag agaaatccct tgctatcggg
      361 taaacctatc gctaggatta gcaatcatta tcatttagat tactatcccg attatggcct
      421 atcgttccgc accgctctat gaagatatca tctggcgaac gcatctccag ccgcaggatg
      481 ctgggcttgc acaagccgta cgtgcgacga tcgccaaaca tcgtgaacat ttgctcgagt
      541 ttatccgcct ggatgaaccc gctccgctta acgccatgac gctggcgcaa tggtcatcac
      601 cgaatgcgct aagttctcta ctcgcggtct attccgatca tatctatcgc aaccaaccaa
      661 cgatgatccg cgagaacaaa ccgctgatct cactatgggc acaatggtat atcggcctga
      721 tggtgccacc attaatgctg gcgctactga cgcaggaaaa ggcattagat gtgtcgccgg
      781 aacatttcca tgctgagttt cacgaaaccg gacgcgtcgc ctgtttctgg gtcgatgtgt
      841 gtgaagataa aaacgcaaca ccacattcgc cgcagcagcg aatggaaacg ttaatcagcc
      901 aggctctggt tccggttgtg caggcactag aagcgaccgg agagatcaac ggcaaactta
      961 tctggagtaa taccggttat ttgatcaact ggtatctcac tgagatgaag caactgctcg
     1021 gcgaggcgac ggttgaatcg ctgcgccatg ccctcttttt tgagaaaacg ctcacgaacg
     1081 gtgaagataa tccactctgg cgtaccgtcg tgctgcgcga tggcctgctg gtgcgccgaa
     1141 cctgctgcca gcgttatcgc ttaccggatg tgcagcaatg tggcgattgt acgctgaaat
     1201 gaaagcactg ccggggaagt aaacccggca tcatgcggat taatagggat gcaacacatt
     1261 acttgcttcg caatgccgca tacataacag aatatctgcg gcctccaaca cccctgcatc
     1321 agaactgacg cccagtttcg acatcacatt aaatttatgt gcacggatcg ttttgatatt
     1381 gcgtttaagc tgctcggcaa tttgtgtcat tgagtagcca cgcgacataa agcgcaatat
     1441 ttctctctcc gtcgggctta gcgtccggct ttggttaatg taccactgat tgttcagtcg
     1501 gtcggtcgcc tgacgtacac catttaatga caaaaagagt tcctgatgaa aaatctccag
     1561 cgttgacgct ttacttaata caccgtccag cggtgatggc gacaatgaac caatcagccg
     1621 agcttcaata tcatcatccg caataactaa acgccgggta cgcggaaact taatcgccag
     1681 ttcagtcagg caagataatc cctctctgcg ctcacttctc atggcagaaa aagaaaaatg
     1741 accgccgcaa atgagatccg cgacatggca tcctgaaatg actcctgact ggtataggta
     1801 tggagcttat aagggttacc cgcaaacttt ctgaataaac tctcaatacc gatactgctc
     1861 atgacgcatt tttctatgag tgcgacattt ctcttcttaa ttcggctgtg ttccattctg
     1921 cggcatctcc ataaacagaa ggcaagttaa gttctcttgc accctgcgcg ctatttatcc
     1981 atgcatacat ttcagcgttg ctgtgaattg ccagtcgacg catcgcactg tttttttggg
     2041 cgctgatagt tttattactt ttcttaagca acgaaactat ctggttgatg ccccatcctt
     2101 tacctaatag ccgcagtacc ttgcgctctg aaagagtgag aatgacggag cgatagctaa
     2161 aatcatgagt ttcattcatt gccggagagg tcagcatggc gctgatacgc tctgcgtgcg
     2221 tattgccgga acgtacggtc ttgaccagat tctcaatggg ttcaacatca gacaataacg
     2281 tcgccgtagg gcacatgagc aattctactg cctgggaata ccaggagcgt gacaccatga
     2341 aaacccagtg aatttcccga tattgtgaga ttaaagaata ataatgttca caaacagaac
     2401 gtggatcttc actttcaccg gctaaatcag caatgactaa tccggaacga cgtaattgta
     2461 ataaggtaaa gtcctccgca gaggcgctgg atattatttc atattcaggg aagtgagtcc
     2521 tcatgacctc ttttaaccct gcttgcataa caggtatttt actgataaca attccatttt
     2581 tgcagcatcc tggcaacata tttcctccac atccactgtc taaaaatcat gatggtttat
     2641 tcaggatatt cattccttaa atgtttccag caaattaata gattaagcga ataaattatc
     2701 cttagcattc actttcatat cagcatactc ctgctgcaca acaactccac tgcatgtgtc
     2761 agaaggttag catcaaatga taacctggtg aaatagcctg gagacattta aaatatctac
     2821 attaagttgt taggaatact taatgaaaaa cagaaatcac attcatttaa tttataatta
     2881 aatgatatcc cttcccgcag aatgaaaagt cacacaacca atatttattc aatgaaatct
     2941 gatggtttta acttgttaac attaaaaaac gtgcccggtt atctattatc ctgattcgta
     3001 aaggccaaac aataaattca ttatagtgat aatattcatg tgatagtttg tttgcggcga
     3061 gagataattc gctttttatc accgagcttg tcccgataac caggattaat cagcgcaatt
     3121 ttgatcttaa cctaccgcaa aacaaccgtg cttcatgata caaatggatt ctcattatct
     3181 gaacaatacg cagcacgtct atgacaaagg gcgagttatg caaactgagc aacagcgagc
     3241 cgtaacacgg ctttgtatcc agtgtggatt atttcttttg caacatggtg cggaaagcgc
     3301 gttggttgat gagctttcct cacgactggg tcgggcgttg gggatggaca gcgtcgaaag
     3361 ttctatctct tcgaacgcca tagtgctgac aaccattaaa gatgggcaat gcctgacatc
     3421 gacacgtaaa aatcacgatc gcggcattaa tatgcatgtg gtgactgaag tccagcacat
     3481 tgtgattctg gcggagcacc atctgctgga ttacaaaggc gtagagaaac gatttagcca
     3541 aattcagcca ttacgttacc caagatggct ggtagcctta atggttggcc tttcttgcgc
     3601 ctgtttctgc aaactcaata aaggtggctg ggatggtgcc atcatcacct tctttgccag
     3661 tacggccgcg atgtatatcc gccagctgct ggcacaacgt catcttcatc cgcagatcaa
     3721 cttttgcctc accgctttcg ccgccaccac catttccgga ttgcttttgc aacttcccac
     3781 tttcagcaat acacccacta tcgcgatggc cgccagcgtt ctgctgctgg tgccgggatt
     3841 tccgttgatt aatgccgtcg ccgatatgtt taaaggccac atcaataccg gactggcacg
     3901 ctgggcgatc gccagtctgc tgacactggc tacctgcgtc ggcgtggtga tggcactgac
     3961 gatttggggg ctacgcggat gggtgtgatc gagtttctgt ttgcattggc gcaggatatg
     4021 atcctcgccg ccattccagc ggtcggcttt gcgatggtgt tcaacgttcc cgttcgggca
     4081 ttacgctggt gtgcgctgct tggcgcgatt ggtcatggtt cacgaatgat cttaatgacc
     4141 agagggctga atattgagtg gtcaaccttt atggcctcca tgctggtcgg caccattggt
     4201 attcaatggt cgcgctggta tctggcgcat ccgaaagtgt ttaccgtggc ggctgttatc
     4261 cctatgttcc cgggcatatc ggcttatacc gcaatgattt cggcggtaaa aatcagccag
     4321 ttaggttaca gcgaaccgtt gatgattacc ctgttaacca actttcttac agcttcatcg
     4381 attgttggtg cgttatccat cggtctttcc attcctggat tatggttgta ccgcaagcgc
     4441 cctcgcgtat aaaattgcct cgcttaaagc acacggatga gagacagcct cctctcctcc
     4501 gtgtgttact ataaaagtta tctcccttct cgttcatcgt tccatatttg agaaacagta
     4561 tgtcttccag agttttgacc ccggacgtcg ttggtattga cgccctggta cacgatcacc
     4621 aaaccgttct ggcaaaagct gaaggcggtg tggttgccgt atttgctaac aatgccccgg
     4681 cgttttatgc cgtcacgcct gcacgcctgg ctgaactgct ggcgctggaa gaaaagctgg
     4741 cgcgtccggg aagcgatgtc gctctggacg atcaactcta tcaggaaccg caagccgctc
     4801 ccgttgctgt acccatgggg aaattcgcca tgtatccgga ctggcaaccc gatgccgatt
     4861 ttatccgcct ggcggcgcta tggggtgtgg cactaagaga gccggtgacc accgaagaac
     4921 tggcctcatt cattgcctac tggcaggcgg aaggtaaagt ctttcaccat gtgcagtggc
     4981 aacaaaaact ggcgcgcagc ctgcaaatcg gtcgtgccag caacggcgga ctgccgaaac
     5041 gagatgtgaa tacggtcagc gaacctgaca gtcaaattcc accaggattc agagggtaac
     5101 gatgaaaaac gttggcgacc tgatgcaacg cctgcaaaaa atgatgcctg cccatatcaa
     5161 acctgcattc aaaacgggtg aagaactact ggcctggcag aaagaacaag gagcgatccg
     5221 ctccgccgct ctcgaacgtg aaaatcgggc gatgaaaatg cagcgcacct ttaaccgctc
     5281 cggtattcgg ccactgcatc agaactgctc ctttgagaac tatcgcgttg agtgtgaagg
     5341 gcagatgaat gcgttaagca aagcgcgcca gtacgtcgaa gagtttgacg gcaacatcgc
     5401 cagcttcatc ttttctggta agccaggaac cggcaaaaac catctggcgg cggcaatctg
     5461 caacgagctg ctgctacgcg gtaaatccgt attgatcatc accgtggccg atattatgtc
     5521 ggcgatgaaa gataccttca ggaatagcgg taccagtgaa gaacaactgc ttaacgatct
     5581 gagcaacgtt gatctgctgg tgatcgatga gatcggcgtg cagaccgaat cgaaatacga
     5641 aaaagtgatc atcaaccaga tcgtcgatcg ccgctcttct tccaaacgcc caaccgggat
     5701 gctgaccaac agtaatatgg aagagatgac caagttgctg ggcgaacgcg tgatggaccg
     5761 tatgcgcctg ggtaacagtt tgtgggtgat cttcaactgg gatagctacc gtagccgggt
     5821 aacaggtaaa gagtattaat ccccgtttct ggcggtatac tgcgacacaa ttccaccttg
     5881 agtaatgatg atggaaactg ttaaacatct tctgtgctgt gccattgccg ccagcgcatt
     5941 aatttccacc ggggtgcatg ctgcgtcctg gaaagatgcg ctctccagcg ccgccagcga
     6001 acttggcaac caaaacagca cgacacagga aggcggttgg tcgctcgcgt cattaactaa
     6061 cttgcttagc agcgggaacc aggccttaag cgcagataac atgaacaacg ccgcaggcat
     6121 tctgcaatac tgcgcgaagc aaaagctggc gtcggtaacc gatgccgaaa acatcaagaa
     6181 ccaggtgctg gaaaagctgg gcctgaacag tgaagagcaa aaagaagaca ccaactatct
     6241 ggatggcatt cagggtttgc tgaaaaccaa agatggtcag caactcaatc tggataacat
     6301 cggaacgact ccgctggcag aaaaggtgaa aaccaaagcc tgcgatctgg tgttaaagca
     6361 ggggctgaac ttcatttcct gaaccgcgaa acgccgcgtt ttagctgtta cccggctgac
     6421 gcggctctct cctgcccttt tccctgcttc tggacggttt tccccctgtt acacgggaag
     6481 cgaccgcgat caaaaaagtc tgtttataaa ctaattccta acaacatcgc atttttttga
     6541 cactagaatt gcagcaatat ggcgacgcca ttacattgtt cttctcaaaa agcttaaacg
     6601 ttggctaaac ggcccggttt agtgaggatc gcccgttgtc agaactactc tctttcgccc
     6661 tttttctcgc ctctgtgctg atttacgcat ggaaagcggg acgtaacacc tggtggtttg
     6721 cagccacatt aacggtgctg gggctatttg tcgttttaaa tatcaccctg tttgccagcg
     6781 actattttac tggcgatggt attaacgacg cggttctcta taccttaacc aacagcctga
     6841 ccggtgctgg cgtcagcaaa tacatcctgc cgggtatcgg cattgtgctg gggctgacag
     6901 cggtgttcgg tgcgctgggc tggatcctgc gccatcgtcg ccatcatccg caccattttg
     6961 gttacagcct gctggcgctc ttactggcgc tgggttcggt ggacgccagc ccggcatttc
     7021 gtcagataac ggaactggtg aaatcccagt cacgcgatgg cgacccggac tttgcggctt
     7081 attataaaga gccgtcgaaa actatccctg acccgaaact caacctggtt tatatctacg
     7141 gcgaaagtct cgagcggacc tattttgata acgaagcttt cccggatctc acgcctgaac
     7201 tgggcgcgtt gaaaaatgaa ggcctggatt tcagccacac gcagcagctg ccaggaacgg
     7261 attacacgat tgcgggcatg gtggcttctc agtgcggcat accgctgttt gccccctttg
     7321 aaggcaacgc ctccgcctct gtctccagct tcttcccgca gaacatctgt ctgggcgata
     7381 tcctgaaaaa ctcgggttat cagaactatt tcgtgcaggg cgcgaatctg cgttttgccg
     7441 gtaaagatgt gttcctgaag tcgcatggct tcgaccactt atacggctca gaagagctga
     7501 aaagcgtggt ggccgacccg cactatcgca acgactgggg attctacgac gataccgttc
     7561 tcgatgaagc gtggaaaaag tttgaagagc tttcccgctc aggtcagcga ttctcactgt
     7621 ttaccctgac agtcgatacc catcacccgg atggttttat ctcgcgtacc tgtaaccgca
     7681 aaaaatatga ttttgacggt aagccgaacc agtcattcag cgcggtaagt tgcagccagg
     7741 agaatatcgc ggcgtttatc aacaaaatca aagcgtcacc gtggtttaaa gataccgtca
     7801 tcgtcgtctc ttctgaccat ttagcgatga acaacacggc gtggaaatac ctcaataagc
     7861 aggatcgcaa taacctgttt tttgtcattc gtggcgacaa gccgcagcaa gagacgctgg
     7921 cagtgaagcg taacacgatg gataacggcg cgacggtgct ggacattctc ggtggcgata
     7981 actatctcgg acttggtcgt agcagtttat ccgggcagtc gatgtcggaa atcttcctca
     8041 atatcaaaga gaaaacattg gcgtggaagc cggatatcat ccgcctgtgg aaattcccta
     8101 aagagatgaa agagttcacc atcgaccagc agaaaaacat gattgccttc tcgggtagcc
     8161 atttccgttt gccgctgctg ttgcgggttt cagacaaacg cgtggaaccg ctgccggaaa
     8221 gcgaatactc agcaccgctg cgtttccagc tggccgattt cgctccacgc gacaatttcg
     8281 tctgggttga ccgttgctat aagatggcac aactctgggc tccggaactg gcactctcca
     8341 ccgactggtg tgtctcgcaa gggcagcttg gcggtcagca aattgttcaa catgttgaca
     8401 aaacaacatg gcagggcaaa acggcattta aagatacggt catcgacatg gcgcgttata
     8461 aaggcaatgt cgatacgctg aaaattgttg ataacgatat tcgctacaaa gccgacagtt
     8521 tcatcttcaa cgtcgccggt gcgccagaag aggtgaaaca gtttagtggg atttcccgtc
     8581 cagagtcgtg gggccgctgg tccaacgcgc agctgggcga tgaagtaaaa atcgagtaca
     8641 agcatccgct gccaaagaaa tttgacctgg tgattaccgc caaagcatac ggcaataacg
     8701 ccagccgtcc tattccggta cgcgtaggca atgaagaaca aacccttgtg ctgggcaatg
     8761 aagtgaccac caccacactg catttcgata acccaaccga tgccgacaca ctggtaattg
     8821 tgccgccgga acctgtctca accaacgaag ggaatatcct cggacactcg ccacgtaagc
     8881 tcgggatcgg catggtggaa attaaagtgg tggaacgtga aggataattc ctgactgatg
     8941 tgtaggtcgc ataaggtgcg acctacacac cttctgcggc ctacaaaaca tcattgagaa
     9001 acagaaaaaa acagcgccca acacttcccc ggacgctgca tggcaacttt aataatctcg
     9061 ccttatcaga aagtaattac acccttaatc aactcacgat tgttaatcac atcgcgctcg
     9121 taggtttctg ccagcgtggc gaacggatag cgatgggtta acatcatgtc agcagtgatt
     9181 tttccttccg ccatcagtcg accgacttta gcaaaatctt ccggcgtggc gttgcggcta
     9241 cccatcatcg tcgtttcttt tttatggaat tccggatcgg agaactgcaa ctcaccttta
     9301 aacaggccga caaataccac cgtgccgccg tgacgaatca aattcacggt gttattcatc
     9361 gcatgttgat tacctgtcgc gtcgatcact ttctgcgcca gcgaaccacc aaactgcgcc
     9421 cgtagctgcg cgtcaaaatc ttcggctgac gggtccagta aaggtaattc cagacgcgtt
     9481 gccacatgtt cacggcgcgc cggactggta tccgccacca ccacctgtgc gccatcggct
     9541 ttagcgattg ccgccgcgcc cagaccgatt ggccccgccc cgaccaccag cacctgctcg
     9601 ccgggagcaa tggctgcgcg acgcaccgca tgagcgctaa tagcgaaagg ttcaatcaat
     9661 gctgccgcct gcgggtcaat accgtctgcg ggcaaaatgt tcgccaccgg cacgctcaaa
     9721 tactcactaa aaccgccatc ctgatgcacg ccaatgactg aaattttttc acagcaattg
     9781 gtacgcccgc ttttacacgc cgggcattgc tgacaggcaa cataagggat cacagcaact
     9841 tgcagaccat ttttaagatc agcaatattt ttacccagcc taacaatctc cccacatatt
     9901 tcatggccta aaacacgtgg ataactaaaa aatggttgat ttccacccca ggcatgaata
     9961 tcggtaccgc aaatcccgac agacttaatt tttattaatg cttcattgtc acccggaata
    10021 ggtatctcgc gttgtttcca gactaattct ttcggctgct ggcaaattaa aacattcatc
    10081 gtagacatga ttcggctctc cattttttgt tgccttagat atcaatgaaa atgaaaaatg
    10141 gcagcggaac ggaaaatctg ttttgtgaaa acacacgcat aaaaatgttt taaatcgggt
    10201 tttaatggac tcacaaggag gaaaatatga gtcgttcaca aaatttacgc cacaatgtga
    10261 ttaaccaggt cattgatgat atggcgcggg gtcatatccc ttccccactt ccatcgcaaa
    10321 gtgcgctggc ggaaatgtac aacatcagcc gcaccacagt gcgtcatatt ctcagccatt
    10381 tacgcgaatg cggcgtcttg acgcaggttg gaaacgacta tgttattgcg cgtaaacctg
    10441 accacgatga cggtttcgcc tgtactaccg cttcaatgag tgaacaaaac aaagtgtttg
    10501 agcaggcttt tttcacgctg ataaaccagc gccagttacg cccaggggaa actttttctg
    10561 aactgcaact ggctcgggcc gcgggtgtca gcccggtggt tgtaagagaa tatcttttaa
    10621 aattcggccg ttataatctt attcaaagcg aaaagcgcgg ccagtggagc atgaagcaat
    10681 tcgatcaatc ctacgccgag cagctgtttg agctacgcga aatgctcgaa acacattcac
    10741 ttcagcactt tctcaacctg cctgatcatg atccccgctg gctgcaggcg aaaaccatgc
    10801 tcgaacgtca tcggctactg cgtgacaaca tcggcaatag ctttcgcatg ttctcgcaac
    10861 ttgacagaga ttttcactcc ttactgcttt cagctgccga caatatcttt tttgatcaat
    10921 cgcttgagat catctcagtc atctttcatt ttcactatca atgggacgaa agcgatctta
    10981 aacagcgcaa tatcattgcc gtcgatgagc atatgaccat tctcagcgct ctgatttgcc
    11041 gcagtgacct cgatgccacc cttgcgctcc gtaaccattt gaattcagct aaacaatcaa
    11101 tgattcgatc cattaatgag aacacgcgtt atgctcatta agtacggatt aaaaacagca
    11161 aactattagc gggtgcacgg ttttatcaaa agataaatac cgggaaattc ccgcttacct
    11221 atgctcacaa tcagtcgact aaaaatgttt ttgtgagcgg tagtaaagtc ctaaaacttt
    11281 aacctgccgt taatgtcaac cttgcgtaat gcacaattac gtaaacaatt aaaattataa
    11341 atacaggagt ccggcgtgga aaaagaaaat atcaccatcg atccgcgttc ttcatttact
    11401 ccatcttcgt cggcagatat tcccgtgcca ccagatggat tagttcaacg cagtacccga
    11461 attaaacgca ttcaaaccac cgccatgttg ttattatttt ttgcggcggt aatcaattat
    11521 ctcgaccgca gttcgctgtc ggtagcaaat ttaacgattc gtgaagaatt gggattaagt
    11581 gccactgaaa tcggcgcttt gctctccgtg ttttcactcg cttacgggat tgcgcaactt
    11641 ccttgcggcc cactattgga tcgtaaaggc ccacgcctga tgctgggact ggggatgttc
    11701 ttctggtcac tgttccaggc aatgtctggc atggtgcaca actttacgca gttcgtgttg
    11761 gtgcgtatcg gtatggggat tggtgaagcg ccgatgaacc catgcggtgt aaaagtcatt
    11821 aacga
//
LOCUS       DADMJE010000131        11822 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.132, whole genome shotgun sequence.
ACCESSION   DADMJE010000131 DADMJE010000000
VERSION     DADMJE010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11822)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11822)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11822
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.132"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(884..1372)
                     /locus_tag="JN001_003123"
     CDS             complement(884..1372)
                     /locus_tag="JN001_003123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011161230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HAY9054279.1"
                     /translation="MFCCYNTVHTGDTVTFMAWHTVQETLKLTGKSRSQLYRDMAKGL
                     VSYRTGKNDRREFETSELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKL
                     DALQQTVTLMLEDKMAREAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSG
                     SE"
     gene            1542..1931
                     /locus_tag="JN001_003124"
     CDS             1542..1931
                     /locus_tag="JN001_003124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054280.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            complement(2097..5063)
                     /locus_tag="JN001_003125"
     CDS             complement(2097..5063)
                     /locus_tag="JN001_003125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs1 family transposase"
                     /protein_id="HAY9054281.1"
                     /translation="MPRRLILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRG
                     DANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQAEPASWAKYGERDVTRRE
                     HAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
                     VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKP
                     NSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYA
                     TLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSRIG
                     QALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRY
                     TPALLEVLELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPE
                     GLDRKFYEICALSELKNALRSGDIWVKGSRQFRDFDDYLLPAEKFAALKREQALPLAI
                     NPNSDQYLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDAAVPDRAQALI
                     DQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLT
                     KMAESSPGLTYAKLSWLQAWHIRDETYSAALAELVNHQYRHAFAAHWGDGTTSSSDGQ
                     RFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLY
                     HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQAYPTLRP
                     LIGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRI
                     ERTLFILDWLQSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRASG
                     LNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHINLTGDYVWRQSR
                     RLEDGKFRPLRMPGKP"
     gene            complement(5067..5627)
                     /locus_tag="JN001_003126"
     CDS             complement(5067..5627)
                     /locus_tag="JN001_003126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY9054282.1"
                     /translation="MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQ
                     LEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATA
                     GEPKAQLAREFNISRETLYQYLRTDD"
     gene            5616..5783
                     /locus_tag="JN001_003127"
     CDS             5616..5783
                     /locus_tag="JN001_003127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054283.1"
                     /translation="MPLHDVSLVEGGLSALSVPLCLKAHFCQAEIYNLRGHVSKNGKA
                     DSILTKRRGPA"
     gene            5937..7514
                     /locus_tag="JN001_003128"
     CDS             5937..7514
                     /locus_tag="JN001_003128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HAY9054284.1"
                     /translation="MRQNLPVTGRNLELPKDANILSTTSPQSHITYVNPDFIKISGFT
                     EEELLGQPHNIVRHPDMPPAAFEHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAYVTPI
                     AKNGSIVEYQSVRTKPEPEQVLAAEKLYAQLRSGKAARPKLAASFSVKILLLIWGSII
                     SSAMAAGMLTDTSISSLLLATLMSGSLSSVSVLAILSPLGRLVERARNISNNPLSQSL
                     YTGRTDEFGQIEFALRMMQAETGAIVGRIGDASNRLSEHTRGLLKDIESSNVLTVEQQ
                     AETDQIATAVNQMVASIQEVASNAQHAADAAGRADTETASGQRLVAHTSQSITALEGE
                     IRQATQVIHELEGQSNEISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD
                     EVRSLAARTQQSTTDIQSMISALQERAQSAVTVMEQSSRQAHTSVAHAEEAATALDGI
                     GQRVNEITDMNAQIATAVEQQGAVSEDINRSIINIRDAADTNVQTGQNNLQSAKSVAQ
                     LTSALSELAKQFWEKRG"
     gene            7677..8159
                     /locus_tag="JN001_003129"
     CDS             7677..8159
                     /locus_tag="JN001_003129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001956173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054285.1"
                     /translation="MFSEFCGSPYQIVDEYYPAFAALMAEQGKELPGYVQREFEEFLQ
                     CGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARRMAESAALLVDEVLPEQPMR
                     QWVLSFPFQLRFLFGVVCGKGRNPTLRLWPAIFSGEIDVFPGDRRSRLISSMTSVAPA
                     "
     gene            complement(8131..8967)
                     /locus_tag="JN001_003130"
     CDS             complement(8131..8967)
                     /locus_tag="JN001_003130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HAY9054286.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(8967..9770)
                     /locus_tag="JN001_003131"
                     /note="aph(3'')-Ib"
     CDS             complement(8967..9770)
                     /locus_tag="JN001_003131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HAY9054287.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            complement(9831..10646)
                     /gene="sul2"
                     /locus_tag="JN001_003132"
     CDS             complement(9831..10646)
                     /gene="sul2"
                     /locus_tag="JN001_003132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HAY9054288.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            complement(11306..11710)
                     /locus_tag="JN001_003133"
     CDS             complement(11306..11710)
                     /locus_tag="JN001_003133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012579059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid replication initiation protein"
                     /protein_id="HAY9054289.1"
                     /translation="MLHVAGEKRQHRRVSRICDTGDIPLPRSLTRYARSFGCGERYRL
                     TDGDGNFLEDTRKTLSKEEIRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRR
                     FPLVAPSCALLFLPFGLPVSFRCYGRGFSFHA"
BASE COUNT         2572 a         3220 c         3351 g         2679 t
ORIGIN      
        1 atatgatgaa caactggatt cgactgatac gcagcttccc ggcgaatatg acctttttga
       61 tttaatggcg caggttactg aagagaacct gcatgcccct gtggattttg ggtcgcctgt
      121 cggccgggaa gcgttatagc tttttcgctt gcccgcgtac gtggtaatac tccggtatta
      181 ccttttattt ctttattttc atgtaattac agtggatttt taatacccgg gtattactcg
      241 tgaaaacgaa atattccttt tttttctttt aattcatgca gttgcgatga aaatcgcggc
      301 tgcgttaggt gtatgaccat tttgaggttg aaaaataatc aaccatggcg ggtgatttac
      361 gcaggttaag gggagatcgt gacaaaaaaa gcgttcctca ctgtatcgtt catgcctgca
      421 tgaacgggtt attcttcctg actacagaat tacatcgctc cttcagttca tacatcactt
      481 ttacatcact tttacataac ttttacatca ttccttcagc tcatacgtca ctttcatcct
      541 ctgtgccatt tgtacatcac ccccttcctg aacgtgctga cagcgggttt tccggctgcg
      601 ccggcaacgc ttcacggcca cgcaataaat tgcgtccccg ttcaccgttt tcggatggga
      661 agaacgccgg aaacaggact taccccggct gaatggtgtg aatttccgcg ctatgcactt
      721 gtgcgcatac tcatgcatgc cgtaaaaaca gagcctgcgc gtttctggcg ggttttcggg
      781 tggtttgttg cctgttttac cggtttcccg tcagaaacgc cctgagggcc tctcaggcgg
      841 tgctgataac agatgttatg gtaaatcaga gtcacctgca ctgttactct gaaccggagc
      901 gaaacagccg cgaccagaat ccccgctttt tttcctgtgc cagcgcgtca gccagacggc
      961 taatttcggc ctgtagttgt tccctctcct catttcgcag gcggttttct gcttcccgcg
     1021 ccatcttgtc ttcaagcatt agggtaacag tctgctgcag agcgtccagt ttctgctgaa
     1081 tgacgtctag ctgagcattt tccgcctggc taacgacaga tttggagtgt ccctccttgt
     1141 gcctttttgg tgtctcagaa gtgcgcagct cgccataggc ccgaatcagt tcactggtct
     1201 cgaactcccg gcgatcattt tttcctgtgc gatagctgac aaggccttta gccatgtcac
     1261 gatataattg cgagcgcgac tttcctgtta atttcagtgt ctcttgaact gtgtgccatg
     1321 ccataaaagt gacagtgtct cctgtgtgta ccgtattgta acagcagaac atattactgt
     1381 tttaacacaa aaggtctgag gctgcccgtg aggcgtgaaa aatacacaaa aaacctgttg
     1441 acggtgtggt tttgacgggc gtagtatttc gaacactgta tataaacaca ttgttataaa
     1501 tacagttttt gctgttttta aaagtcaaag aggataattt tatgagtaca gagttaaata
     1561 gcggtactgt cggtggtttt ggtcacatgg gaccaaatga cccctacaat gatggtcata
     1621 gcggctctgg aagttcggga ggtagtttta acggtggtgg taatggtggc catgataata
     1681 gtagtggttc atcttatact gcatcctttg gtctcatcac tggccgacac ccgataactg
     1741 tcccaggtac gaagaatatt aattctgtcg atctttctgc tgtcattaat aacattatac
     1801 atcatgaagg tgcacgcaat aacatgtacc tagatactgc gaacaatgta agagtgggag
     1861 tgacgggcac tggctggcaa tgtctagcaa cggcaggcat ttcggctgag ggtaaaagaa
     1921 ctttccgcta agcgatagac tgtatgtaaa cacagtattg caaggacgcg gaacatgcct
     1981 catgtggcgg ccaggacggc cagccgggat cgggatactg gtcgttacca gagccaccga
     2041 cccgagcaaa cccttctcta tcaggggagc ccgcagaatt cggaaaaaat cgtacgctaa
     2101 ggttttccgg gcatccgtaa gggccgaaac ttcccgtctt ccagtctgcg gctctgccgc
     2161 cagacgtaat cgccggttag gttgatgtgc tcccagccca gcggcgacag gaattgcagc
     2221 agctcgccgt ccaccggctt gccggcctcg accaacccct gggtggcgcg ttccaggtac
     2281 accgtgttcc acagcacgat agccgccgtc accaggttga ggccgctggc ccggtagcgc
     2341 tgctgctcga agctccgatc cctgatttcc ccaaggcggt tgaagaacac cgccctggcc
     2401 agcgagttgc gcgcctcacc tttgttcagg ccggcatgca cgcggcggcg cagttcaaca
     2461 ctttgcagcc agtccaggat gaacagcgtg cgctcgatcc ggcccagctc gcgcagggcc
     2521 acggccagtc cgttctggcg cgggtagctg ccgagcttgc gcagcatcag cgaggcggtg
     2581 acggtgccct gcttgatcga gctggccagg cgcaggatgt cgtcccagtg ggcacgcacg
     2641 tgcttgatgt tcagggtgcc gccgatcagc gggcgcaacg tcgggtaggc ttgcacgccc
     2701 tgcggcacgt acagcttggt ttcgccgagg tcgcggatgc gcggcgcgaa gcggaagcct
     2761 agcaggtgca tcagggcaaa gacgtgatcg gtgaagccgg ccgtgtcggt gtagtgctcc
     2821 tcgatccgca ggtcggactc gtggtacagc aggccgtcga gcacataggt ggaatcgcgg
     2881 acgccgacat tcaccacgcg ggtgctgaac ggcgcgtact ggtcggagat atgggtatag
     2941 aacagccgtc ccggctcgct accgtacttc gggttgacgt gcccggtgct ctcgccccgg
     3001 ccacccgcgc ggaagcgctg gccatcggag gatgaggtcg tgccgtcgcc ccagtgggcg
     3061 gcaaaggcgt ggcgatactg gtggttgacc agctcggcca aggccgccga ataggtttcg
     3121 tcgcggatgt gccaggcttg cagccaggac agcttggcgt aggtcaggcc ggggctcgac
     3181 tcggccatct tggtcagccc gaggttgatc gcatcaccga ggattgcgga cagcagcaac
     3241 gtcctgtctt tggcctcggc cccgtccttc aagtgggtga agtggcggct gaagcccgtc
     3301 cagtcgtcca cgtccatcag cagttcggtg atcttgatgc gcggcagtaa ctggctggtt
     3361 tggtcgatca gcgcctgcgc ccgatccggc accgccgcat ccagcggggt gattttcagc
     3421 cctgactcgg tgaggatggc atcgggcagc tcgttgtcct tggccaggcg ggtgacggtg
     3481 gccaactgct cgtccagcag ctgcaaacgc tcttccaggt actggtcgct gttcgggttg
     3541 atcgccaggg gcagggcctg ctcgcgcttg agtgcggcga acttctcggc cggcagcagg
     3601 tagtcgtcga agtcgcggaa ctgccgcgag cccttgaccc agatgtcgcc ggagcgcagg
     3661 gcgttcttca gctcggacag ggcgcagatt tcgtagaatt tccggtcgag gccttccggg
     3721 gtgatcacca gcggcttcca gcgcggcttg atgaaggccg tgggtgcatc ggccggcacc
     3781 ttgcgcaggt tgtcggcgtt catctcacgc agggtctgca cggctgccag cacgccttgc
     3841 gcggccggcg cggcgcgcag ttccagcacc tccagcaagg ccggcgtgta acggcgcagg
     3901 gtggcgaagt tctcgccgac caggtgcagg tggtcgaagc cttccggccg ggccagcagc
     3961 tcggcctcgc tgacgctctc ggtgaactcg tcccagggaa tcaccgcctc gatggcggca
     4021 taggggtcgc tgccgctttc cttcgcttcc agcagcgcct ggccgatcct ggagtacagg
     4081 cgcaccttgt cgttgatcgc cttgccctgc ttctggaact gctgctgatg cttgtgcttc
     4141 gcgccgctga acagcttgac caggatgcgg tcatgcagat cgaccagctc atcgatcacg
     4201 gtcgcggtgc tctccagcac cacggcggcc agggtcgcgt agcggcgctg cggctcgaac
     4261 ttaccgaggt ctttgggcgt catctgccca ccctcgcggg ccagcttgag caggcggttc
     4321 tggtggatgt gccggcccag gccttcgggc aagtccacca actgaaatgt cttcagccgc
     4381 tcgatgtgtt ccagcatgtg ccgagagttg ggtttcagcg gtgcctggcg cagccaggtc
     4441 aaccaggtga tgctgctgcc ggccttgagc ttcaacagct cgtccagctt ggcccgatgc
     4501 gagtccgtga gtggttcgac cagggcgcgg tagacccgcc gattggctcg cgcaatggct
     4561 tccgagcagg cccggtcaat cacgctcagc gccggcagga tgcgtcgttt ctgccgtagg
     4621 ctctccaggg cctgaccggc cagcagcaag cctttgtcgg tctgctgggc cagctcggtt
     4681 agctcgcgca ccagggcgcg gaagtcggac aggccgaacg gggccagttg caggtaggtg
     4741 cgcagttcct gggcatgctc gcgacgggtc acgtcgcgct cgccgtactt tgcccagctc
     4801 gccggctcgg cctggacttg cttcgccacc cacaggatga ccggctcggg cagctcgctg
     4861 tcggttccca gcgcgtaacc ggggtagcgc agcaggcaga gctgcacggc gaagccgagg
     4921 cggttggcgt cgccgcgtcg ctggcggatc agcgacaggt cggagtcgtt gaaggtgtag
     4981 tagcggatca ggtcatcctg gctttccggc agcgcaagca gggtgtcccg ctccgtggcc
     5041 gagaggatca agcgacgcgg catgtgtcag tcgtccgtgc ggaggtactg gtagagggtt
     5101 tcccggctga tgttgaactc gcgggcaagc tgcgccttgg gctcgccggc cgtcgctcgc
     5161 tgccgcaggg tagcagcctg ctcatcggac agggctttct tgcggccccg gtacgcgcca
     5221 cgctgcttgg ccaaggcgat gccctcacgc tgccgctcgc ggatcagggc gcgctcgaac
     5281 tcagcgaagg cccccatcac cgacagcatc aggttggcca tcggcgagtc ctcgccagtg
     5341 aacaccaggc cctccttcag gaactcgatg cgcacgccgc gctgagtcag cttctgtacc
     5401 aagcgacgca ggtcatcgag gttgcgggcc agccgatcca tgctgtgcac caccactgta
     5461 tcgccttcgc ggacgaagct cagcagcgct tcgagctggg ggcgctgggt gtccttgccc
     5521 gatgccttgt cggtgaacac cttgctcacc tgggtttgtt ccagctggcg ttccgggttc
     5581 tggtcaaagc tgctgacccg gacgtagccg atgcggtgcc cctgcacgat gtctccttgg
     5641 ttgaaggcgg cttaagtgca ctttctgttc cgttgtgcct caaagcccat ttctgtcagg
     5701 ctgaaatcta taaccttcgc gggcatgtgt caaaaaatgg gaaagcagac tctattctga
     5761 cgaagcggcg cggccctgcc tgacatcaag ttagggtata gcctagattg acatgcgcga
     5821 tgcaaccctt aacttgcttg cacctatcgt ttccatgcta gctttatcgt aacgctcaag
     5881 aaattgggct taatgccgaa aacaataaaa taaaacagcc aacccttgag gttcttatgc
     5941 gccagaattt accagtgacg ggtcgaaact tagaactccc aaaagatgcc aatattcttt
     6001 cgactacctc ccctcaaagc catatcacgt acgttaatcc tgacttcatt aaaatcagtg
     6061 gtttcactga ggaagaacta ttaggccagc ctcacaacat cgtaagacac ccagatatgc
     6121 cgcctgctgc atttgagcat atgtggagta cattaaaatc tggccgctca tggatggggc
     6181 tagtaaaaaa tcgctgtaaa aatggcgacc actattgggt aagtgcttat gtaacgccaa
     6241 tagctaagaa tggttcgatt gttgaatacc agtctgtaag gaccaagcct gaacctgagc
     6301 aggttttggc tgcggaaaaa ttatatgctc aattgagaag cgggaaggcc gcgaggccga
     6361 aattggctgc tagcttttcc gtgaaaatac tcttgctcat atggggtagt attatatcaa
     6421 gcgcaatggc tgccggcatg cttactgata catcaataag cagcttattg ttagccactt
     6481 taatgtcagg aagcttaagc tctgttagtg ttttggctat tctctctcct cttggaagac
     6541 tggttgaaag agccaggaat atttccaata acccattaag tcaatccctc tacactgggc
     6601 gcaccgatga gtttggccaa atagagtttg ctttacgaat gatgcaagct gaaacaggcg
     6661 ccatagtagg tcgcataggt gatgcatcaa atcggcttag cgaacacacc cgaggcctac
     6721 taaaggatat tgagtcaagc aatgtactta cagttgagca gcaggcagag acagatcaaa
     6781 tagcaacggc agtaaaccaa atggtggcaa gcattcaaga ggttgcgagc aatgcacagc
     6841 atgctgcaga tgcggccgga agagcagaca ctgagacggc atctggccag cgtctggtag
     6901 cccacacaag ccagtcaatc actgcccttg aaggtgaaat taggcaagcc actcaggtta
     6961 ttcatgagct tgaaggtcaa agtaacgaga tatcaaaagt tcttgacgtt atacgaggga
     7021 tcgccgagca aacgaatttg ttggcactca acgcagcaat tgaggccgcg cgtgctggtg
     7081 agcaggggcg tggttttgct gttgtcgccg atgaggttcg cagtcttgct gctcgcacac
     7141 agcaatcgac aacggatatt caaagcatga tcagcgctct acaagagcga gcgcaatccg
     7201 ctgttacagt catggagcaa agtagtcggc aagcgcacac gagtgtagct cacgcagagg
     7261 aagcagctac agctcttgat ggaattggcc aacgcgttaa cgaaattacc gacatgaacg
     7321 cgcaaatagc gactgcggtc gagcagcagg gagcagtaag tgaagacata aaccgcagta
     7381 ttatcaatat acgcgatgct gctgatacca atgtacagac cgggcagaat aatttgcaaa
     7441 gtgcgaaatc tgtcgctcag ttaactagcg ctctgagcga actggcaaaa cagttttggg
     7501 aaaaacgagg ataacgcttt tcagtatctc gacagggata acttacttta ccatcggtta
     7561 tcccttttag ccgcacaaat tttagccatg gcttttcagg aagtcagggc tatcagaatg
     7621 gccttagaaa gcctagtcaa agagctgtca cgagaacacc gttagcttag cgtacgattt
     7681 tttccgaatt ctgcggttcc ccctatcaga tcgttgacga gtattacccg gcattcgctg
     7741 cgcttatggc agagcaggga aaggaattgc cgggctatgt gcaacgggaa tttgaagaat
     7801 ttctccaatg cgggcggctg gagcatggct ttctacgggt tcgctgcgag tcttgccacg
     7861 ccgagcacct ggtcgctttc agctgtaagc gtcgcggttt ctgcccgagc tgtggggcgc
     7921 ggcggatggc cgaaagtgcc gccttgctgg ttgatgaagt actgcctgaa caacccatgc
     7981 gtcagtgggt gttgagcttc ccgtttcagc tgcgtttcct gtttggggtc gtttgcggga
     8041 aggggcggaa tcctacgcta aggctttggc cagcgatatt ctccggtgag attgatgtgt
     8101 tcccagggga taggagaagt cgcttgatat ctagtatgac gtctgtcgca cctgcttgat
     8161 cgcggccgcg atagctagat cgcgttgctc ctcttctcca tccgcgttcc aagctgcgga
     8221 aaggcaccca taagcgtacg cctggtcgag caggcgacgc ggatcgacgt ccagcgcacg
     8281 agagaatgcg tccgccatct gtgcaatgcg tctaggatcg agacaaaggt cgtctctgtc
     8341 agccggatcg tagaacatat tggcggcgcc aaagcccact tcaccgacca gaccgacggg
     8401 atctatcacc agccagccgc gactggagaa catgatgttt tcatgatgca gatcgccatg
     8461 tagcccacgc agttccgagg cattgctcat catttgatcg gctataatcg ccgcgtggac
     8521 gtagtcagtt tgacaacctg cgttttgatc atcgcgcgcc cgctgaaaca aagctgcaaa
     8581 gcgatcccgg atcgggagaa gggcagaagg caggggttcc tcagatgcgg catacagctt
     8641 cgccattagt tccgctgcaa tttcggtcgc ctggtagtcg ccgtgctcgg caacgatgtg
     8701 agagagcatt cgctccccgg catattcgag caacatcaga ttgttctcac gaccgagcaa
     8761 ccggactgct cccctcccat tgcgccatac cagatagtcg gccccgcgca gttcatcagc
     8821 aatgtcttct ataggtttca atcccttgac gattgcagga gtcccgtctg gcaatgaaac
     8881 tttccaaacg aggctggaaa aggtgtccgc aatgagaaca ggttgcgaaa cgtgccaatg
     8941 agcaggaaaa acaggcggca tgaacatcaa ccccaagtca gagggtccaa tcgcagatag
     9001 aaggcaaggc gttcgcggtc gggggcttcg atccccaata cattgaatag gacagcgaag
     9061 gcgcgctctg cttcatctgg cgctgcccag ttctcttcgg cgttagcaat catgagtgcc
     9121 aaatcggcat agcgatctgc tgttccgagc cgcccaaggt cgatcagacc cgtgcattga
     9181 agagttttag ggtccaccat gaagttcggc atgcagggat caccatggca aacaaccata
     9241 tcggtgcgct cttggtcgag ccgcaccggt agctctcgtt cgacacgagc caaaagatcg
     9301 agctgcggcg tactcttgtc ctcgtccggt aagaagtcgg gattgacggc attgcgggac
     9361 accacatcaa cggcgcgtcc gaacattcgc gacagcctgc gctcaaacgg acattgatca
     9421 accgataggc tgtgaacagc gccaagttgc tgccccattg acggccacgc tttgagcaaa
     9481 tccgctccag acagatcagc cgccggtact cccggaattg ccgttatcac caagcatgca
     9541 ccctcctgtt cctcctgcca gttgatgacc tcggggcaag ccacacctcg acctttgagc
     9601 caaatgaggc ggtcacgctc tccagcgagc tcaccgcggc gggaagcagg tgcgattttc
     9661 gcgaaggcat gcccgtcacc acgtcgaaaa acaaaatcac cagattctcc gcctctgaca
     9721 ggcaaccagt cagaatgcga ttcaccaaaa aaaatattag ttcgattcaa tggaggttcc
     9781 ttcagttttc tgatgaagcg cgaatataga gaaatatccc gaatgtgcag ttaacgaatt
     9841 cttgcggttt ctttcagcgc cgccaatacc gccagcccgt cgcgcaaggg gcgcggctcg
     9901 tgtgtgcgga tgaagtcagc tccacctgcg gcggcggcaa gctctgcagc gagtgtcgcg
     9961 gccccgacat cccccggacc acggcctgtg agcgcgcgca gaaaggattt gcgcgaaaca
    10021 gacagaagca ccggcaaatc gaagcgcagc cgcaattcat cgaaccgcgc cagcaccgag
    10081 agcgaggttt cgggagcagc ccccagaaaa aaccccatgc cgggatcaag gacaaggcgg
    10141 ttgcgtttga taccggcacc cgtcagcgcc gcgatgcgcg cgtcaaagaa cgccgcaatg
    10201 tgatccatga tgtcgccagc gggtgcctcg cgccgatctg cctgcccgtc ttgcaccgaa
    10261 tgcataacga cgagtttggc agatgatttc gccaattgcg gatagaacgc agcgtctgga
    10321 aaaccgcgaa tatcattgag ataggccaca ccacgcgaca aggcataggc ttgcgtcgcg
    10381 ggttgataac tgtcgagcga gacgggaatg ccatctgcct tgagcgcgtc cagcaccggc
    10441 gcgatacgcg cgatttctgt gtcggacgaa acaggcgcgg cgtcgggatt gctggatgcc
    10501 ggaccgaggt cgatcacatc tgccccctcg gccatcagct tacgcgcctg cgcaatggct
    10561 gcgtctggcg ccagataccg gcctccatcg gagaaactgt ccgaggttat gttgacgatg
    10621 ccgaaaatga tgagcgattt attcatgggg gcttctataa taataataat cgagcatgag
    10681 tctcatacgg atgctcgggt cgaaagggaa tccccaggcg agtaacctgt ttgcggtgat
    10741 ccgtttcatg atgatgtatc tgtagcattt tggaaataaa tatatcatct ctcaataagt
    10801 agatatattt atcttttttg cttctttggt gctgcaagtc accaatacga gggaaacctg
    10861 ttacggagcg gtttaaccgt aatcaacagt gactggtgtc atgttcggaa gattaattga
    10921 tagtaatcta caaaggatct tcttgagatc cttttcaatg aatcgtaatc tcttgctctg
    10981 taaacgaaaa aaccgcctgg ggaggcggtt tgttcgaagg ttaagtcagt tggggaactg
    11041 cttaacccgg taacagggtt cacgagaccg ccattaccaa aactgttctt tcagtgtagc
    11101 cgcagtcagg cctctacttc aagacctctt aatctatctt ctcgtgcact cctgttacta
    11161 atggctgctg ccagtggcgt tttgtcgtgt ctttccgggt tggactcaag ttgatagtta
    11221 ccggacaagg cgcagcggtc ggactgaacg gggggttcgt gcatacagtc cagcttggag
    11281 cgaactgcct tcacggaact gagtgtcagg cgtggaatga gaaaccgcgg ccataacagc
    11341 ggaatgacac cggtaaaccg aaaggcagga acaggagagc gcacgaggga gctaccaggg
    11401 ggaaacgcct gggatcttta tagtcctgtc gggtttcgcc accactgatt tgagcgtcag
    11461 attttgcgat gcttgtcagg ggggcggagc ctatggaaaa acggcttcgc cgtggcctta
    11521 tctcttcttt gctaagtgtc ttcctggtat cttccaggaa atttccgtcc ccgtccgtaa
    11581 gccggtaccg ctcgccgcag ccgaacgacc gagcgtagcg agtcagtgag cgaggaagcg
    11641 gaatatctcc tgtatcgcat attctgctga cgcgccggtg ctgccttttt tctcctgcca
    11701 catgaagcac ttcactgatt ttcgcaatcg tggcaacata gtaagccagt atacactccg
    11761 ctagcgttac atgactggtt cagggctgcg ccccgaaacc cgctaacaac ctctcagcta
    11821 ct
//
LOCUS       DADMJE010000132        11784 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.133, whole genome shotgun sequence.
ACCESSION   DADMJE010000132 DADMJE010000000
VERSION     DADMJE010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11784
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.133"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            29..1414
                     /locus_tag="JN001_003134"
     CDS             29..1414
                     /locus_tag="JN001_003134"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000398460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HAY9054290.1"
                     /translation="MEGGWNEGGKGISIADVMTAGAHGVPREVTEGVIDGLNYPNHEA
                     IDFYHRYKTDIQLFAEMGFKCFRTSIAWTRIFPQGDEQEPNEEGLQFYDDLFDECLKQ
                     GMEPVVTLSHFEMPYHLVTKYGGWRNRKLIDFFIRFASTVFTRYKEKVKYWMTFNEIN
                     NQVNFSESLCPFTNSGILYSPEEDINEREQIMYQAVHYELVASALAVQTGKSINPEFN
                     IGCMIAMYPIYPLTCVPNDMMMATKAMHRRYWFTDVHARGYYPQHMLNYFARKGFNLD
                     ITPEDNAILASGCVDFIGFSYYMSFTTQFSPDNPQLDYVEPRDLVSNPYIDTSEWGWQ
                     IDPAGLRYSLNWFWDHFQLPLFIVENGFGAVDQRQADGTVNDHYRIDYFASHIREMKK
                     AVVEDGVDLIGYTPWGCIDLVSAGTGEMKKRYGMIYVDKDNEGKGTLERIRKASFYWY
                     RDLIANNGENI"
     gene            complement(1471..1689)
                     /gene="marB"
                     /locus_tag="JN001_003135"
     CDS             complement(1471..1689)
                     /gene="marB"
                     /locus_tag="JN001_003135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance protein MarB"
                     /protein_id="HAY9054291.1"
                     /translation="MKPLSSAIAAALILFSAQGVAEQTTQPVVTSCANVVVVPPSQEQ
                     PPFDLNHMGTGSDKSDALGVPYYNQHAM"
     gene            complement(1721..2104)
                     /gene="marA"
                     /locus_tag="JN001_003136"
     CDS             complement(1721..2104)
                     /gene="marA"
                     /locus_tag="JN001_003136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707445.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MDR efflux pump AcrAB transcriptional activator
                     MarA"
                     /protein_id="HAY9054292.1"
                     /translation="MSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQR
                     MFKKETGHSLGQYIRSRKMTEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDV
                     PPHKYRMTNMQGESRFLHPLNHYNS"
     gene            complement(2124..2558)
                     /gene="marR"
                     /locus_tag="JN001_003137"
     CDS             complement(2124..2558)
                     /gene="marR"
                     /locus_tag="JN001_003137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multiple antibiotic resistance transcriptional
                     regulator MarR"
                     /protein_id="HAY9054293.1"
                     /translation="MKSTSDLFNEIIPLGRLIHMVNQKKDRLLNEYLSPLDITAAQFK
                     VLCSIRCAACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTT
                     SGAAICEQCHQLVGQDLHQELTKNLTADEVATLEHLLKKVLP"
     gene            2770..3435
                     /gene="marC"
                     /locus_tag="JN001_003138"
     CDS             2770..3435
                     /gene="marC"
                     /locus_tag="JN001_003138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter MarC"
                     /protein_id="HAY9054294.1"
                     /translation="MLDLFKAIGLGLVVLLPLANPLTTVALFLGLAGNMNSAERNRQS
                     LMASVYVFAIMMVAYYAGQLVMDTFGISIPGLRIAGGLIVAFIGFRMLFPQQKAIDSP
                     EAKSKSEELEDEPSANIAFVPLAMPSTAGPGTIAMIISSASTVRQSSTFADWVLMVAP
                     PLIFFLVAVILWGSLRSSGAIMRLVGKGGIEAISRLMGFLLVCMGVQFIINGILEIIK
                     TYH"
     gene            complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="JN001_003139"
     CDS             complement(3460..4650)
                     /gene="ydeA"
                     /locus_tag="JN001_003139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-arabinose MFS transporter"
                     /protein_id="HAY9054295.1"
                     /translation="MTTNTVSRKVAWLRVVTLAVAAFIFNTTEFVPVGLLSDIAQSFH
                     MQTAQVGIMLTIYAWVVALMSLPFMLMTSQVERRKLLICLFVVFIASHVLSFLSWSFT
                     VLVISRIGVAFAHAIFWSITASLAIRMAPAGKRAQALSLIATGTALAMVLGLPLGRIV
                     GQYFGWRMTFFAIGIGALITLLCLIKLLPLLPSEHSGSLKSLPLLFRRPALMSIYLLT
                     VVVVTAHYTAYSYIEPFVQNIAGFSANFATALLLLLGGAGIIGSVIFGKLGNQYASAL
                     VSTAIALLLVCLALLLPAANSEIHLGVLSIFWGIAMMIIGLGMQVKVLALAPDATDVA
                     MALFSGIFNIGIGAGALVGNQVSLHWSMSMIGYVGAVPAFAALIWSIIIFRRWPVTLE
                     EQTQ"
     gene            complement(4800..5506)
                     /gene="yneK"
                     /locus_tag="JN001_003140"
                     /pseudo
     CDS             complement(4800..5506)
                     /gene="yneK"
                     /locus_tag="JN001_003140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379213.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
     gene            complement(5428..5913)
                     /gene="yneK"
                     /locus_tag="JN001_003141"
     CDS             complement(5428..5913)
                     /gene="yneK"
                     /locus_tag="JN001_003141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001598467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative protein YneK"
                     /protein_id="HAY9054296.1"
                     /translation="MVTPVSISNYIFLPDDFPVRNIAPQVKEVLKNFIDALSTIICDE
                     EWRTSLNTNSATKKIFNNLDNLSYIQRTSFRGNDTLYNEKVQFKLTYPVKNGRHKENI
                     EFQVVINLNPIYLDNFRHDGEINIFALPTQSLSLWGAYFTPASSVCSFCFRMILLNNF
                     Q"
     gene            complement(5991..6872)
                     /locus_tag="JN001_003142"
     CDS             complement(5991..6872)
                     /locus_tag="JN001_003142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054297.1"
                     /translation="MDLTQLEMFNAVAEAGSITQAAAIVLRVPSNLTIRLRQLETELG
                     VDLFIRENQRLRLSPAGHNFLRYSQQILALVDEARSVVAGDEPQGLFSLGSLESTAAV
                     RIPATLAEFNHRYPKIQFSLSTGPSGTMLEGVLEGKLNAAFIDGPINHTAIDGIPVYR
                     EELMIVTPQGHAPVIRASQVNGSNIYAFRANCSYRRHFESWFHADGAAPGTIHEMESY
                     HGMLACVVAGAGIALIPRSMLESMPGHHQVEAWPLAEQWRWLTTWLVWRRGAKTRPLE
                     AFIQLLDVPDSAKQGYQ"
     gene            6973..8362
                     /gene="sad"
                     /locus_tag="JN001_003143"
                     /pseudo
     CDS             6973..8362
                     /gene="sad"
                     /locus_tag="JN001_003143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416042.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="succinate-semialdehyde dehydrogenase"
     gene            8426..9352
                     /gene="glsB"
                     /locus_tag="JN001_003144"
     CDS             8426..9352
                     /gene="glsB"
                     /locus_tag="JN001_003144"
                     /EC_number="3.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaminase B"
                     /protein_id="HAY9054298.1"
                     /translation="MAVAMDNAILENILRQVRPLIGQGKVADYIPALATVDGSRLGIA
                     ICTVDGQLFQAGDAQERFSIQSISKVLSLVVAMRHYSEEEIWQRVGKDPSGSPFNSLV
                     QLEMEQGIPRNPFINAGALVVCDMLQGRLSAPRQRMLEVVRGLSGVSDISYDTVVARS
                     EFEHSARNAAIAWLMKSFGNFHHDVTTVLQNYFHYCALKMSCVELARTFVFLANQGKA
                     IHIDEPVVTPMQARQINALMATSGMYQNAGEFAWRVGLPAKSGVGGGIVAIVPHEMAI
                     AVWSPELDDAGNSLAGIAVLEQLTKQLGRSVY"
     gene            9352..9711
                     /locus_tag="JN001_003145"
     CDS             9352..9711
                     /locus_tag="JN001_003145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4186 domain-containing protein"
                     /protein_id="HAY9054299.1"
                     /translation="MQSLDPLFARLSRSKFRSRFRLGMKERQYCLEKGAPVIEQHAAD
                     FVAKRLAPALPANDGKQTPMRGHPVFIAQHATATCCRGCLAKWHNIPQGVSLSEEQQR
                     YIVAVIYHWLVVQMNQP"
     gene            9850..11268
                     /locus_tag="JN001_003146"
     CDS             9850..11268
                     /locus_tag="JN001_003146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY9054300.1"
                     /translation="MHVHPISTFRLFQEGHLLRNSIAIFALTTLFYFIVAELRLVHEL
                     SLFWPLNGVMAGVFARYVWLNRLHYYAISYVVMLVYDAITTEWGLVSLVINFSNMMFI
                     VTVALLVVRDKRLGKNKYEPVSALRLFNYCLIAALLCAIVGAIGSVSIDSLDFWPLLA
                     DWFSEQFSTGVLIVPCMLTLAIPGVLPRFKAEQMMPAIALIVSVIASVVIGGAGSLAF
                     PLPALIWCAVRYTPQVTCLLTFVTGAVEIVLVANSVIDISVGSPFSIPEMFSARLGIA
                     TMAICPIMVSFSVAAINSLMKQVALRADFDFLTQVYSRSGLYEALKSPSLKQTQHLTV
                     MLLDIDYFKSINDNYGHECGDKVLSVFARHIQKIVGDKGLVARMGGEEFAVAVPSVNP
                     VDGLLMAEKIRKGVELQPFTWQQKTLYLTVSIGVGSGRASYRTLTDDFNKLMVEADTC
                     LYRSKKDGRNRTSTMRYGEEVV"
     gene            11495..11734
                     /locus_tag="JN001_003147"
                     /pseudo
     CDS             11495..11734
                     /locus_tag="JN001_003147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310155.1"
                     /note="catalyzes the formation of D-tagaturonate from
                     D-altronate; incomplete; partial in the middle of a
                     contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tagaturonate reductase"
BASE COUNT         2987 a         2661 c         3031 g         3105 t
ORIGIN      
        1 atggggcggc gcggtagccg cgcatcagtt ggaaggtggc tggaatgaag gaggaaaagg
       61 catcagtatc gctgatgtga tgactgctgg cgctcacggg gtgccgcgtg aagtgacaga
      121 aggcgttatc gacgggctta attatcccaa tcatgaagca attgattttt atcatcgcta
      181 taaaacagat attcagttat ttgccgagat gggattcaaa tgctttcgaa cttccattgc
      241 ctggacacga atctttccgc aaggtgacga acaggagccg aatgaagagg gtttacaatt
      301 ttatgatgat ctgttcgatg aatgccttaa gcagggaatg gaacctgtgg tgacgctttc
      361 acattttgag atgccttatc atctggtgac aaaatatggt ggctggcgaa accgtaaact
      421 gatcgacttt tttatccgct tcgcatcaac ggtcttcacg cgctataaag aaaaagtaaa
      481 gtactggatg acgtttaacg aaatcaataa tcaggtgaat ttcagcgaaa gcctgtgtcc
      541 atttactaat tccggtatct tgtattcgcc agaggaagat atcaatgagc gcgaacaaat
      601 aatgtaccag gcggtacatt acgagttagt tgccagtgcc ctggcggtac agactggaaa
      661 atcgatcaat cctgaattta acattggctg tatgatcgcc atgtatccca tctatcctct
      721 gacgtgtgta cccaacgata tgatgatggc cacgaaagca atgcatcgtc gttactggtt
      781 tactgatgtt catgctcgtg gatattatcc gcaacatatg ctgaattact ttgccaggaa
      841 aggattcaac ctcgatatca caccagaaga taacgcgatt cttgccagtg gttgtgtcga
      901 ctttatcggc tttagctact acatgtcttt tacgacacaa ttttcgcccg ataacccgca
      961 actggattat gttgaaccac gagatttggt cagcaaccct tatatcgata catccgaatg
     1021 gggatggcaa attgatccgg cagggctacg ttattcactc aactggttct gggatcattt
     1081 ccagttgccg ctgtttattg tcgaaaatgg atttggtgcg gttgaccaga gacaagctga
     1141 cggcacggtg aacgatcact atcgcattga ttactttgct tcccatattc gggaaatgaa
     1201 aaaagccgta gttgaagatg gtgttgactt aattggctac accccgtggg gctgcattga
     1261 cctggtttct gccggaacag gggaaatgaa aaagcgctac ggaatgattt atgtcgataa
     1321 agacaacgaa gggaagggaa cgctggaacg gatacgtaaa gcgtcgtttt actggtatcg
     1381 ggatctcatc gccaacaatg gcgaaaatat ttgagacttg aggaagatat tacggagatg
     1441 tcaggctctg tgatcagagc ctgacaataa ctacatagcg tgttgattat aatagggcac
     1501 gccgagcgca tccgacttat cactgccagt acccatgtga tttaaatcaa acggtggttg
     1561 ttcctgcgat gggggaacaa ccacgacatt ggcacaagaa gtaacaactg gctgcgtggt
     1621 ttgttccgca acgccctgcg cggaaaagag aataagcgca gctgctattg cggatgaaag
     1681 tggtttcatg attgcctcag tgacgttgtc acgttatcaa ctagctattg taatgattta
     1741 atggatgtaa aaagcgcgat tcgccctgca tattggtcat ccggtattta tgtggcggaa
     1801 catcaaagta atttttgaag gttcgggtca gagtttgttg cgactcgaag ccatatcgtt
     1861 ctgccagata gagtatcggc tcgttacttt ccttcagctt ttgcgcgatt tccgtcatct
     1921 tacggctgcg gatgtattgg cctaatgaat gaccggtttc ttttttaaac atccgttgca
     1981 ggtgccattt agagtaacct gaacgctctg acactttctc cagtgacagt ggcgattcca
     2041 ggttgtcctc gatccagtcc aaaatgctat gaatggtaat agcgtcagta ttgcgtctgg
     2101 acatcgtcat acctcttttt tgtttacggc aggactttct taagcaaatg ctcaagtgtt
     2161 gccacttcgt ccgccgtcag gttttttgtt aattcttgat gcaggtcctg gccaactaat
     2221 tgatggcatt gttcgcatat tgccgcgccg ctggtggtaa gttttaccag tacgccgcgc
     2281 ttatcattcg ggttcggcaa cctttcaacc cagcctttac agaccaggcg atccagcata
     2341 cgggtcagtg ctccaaggtc gacagacaac acttttttca gttcaaccgg agtaatacac
     2401 gccgcgcagc ggatagagca gagcacctta aactgtgccg cggtaatatc cagcggagac
     2461 agatactcgt taagcagacg atctttcttc tgattaacca tatggattaa gcgacccaat
     2521 ggaataattt cattgaacag atcgctggta cttttcacat tagttgccct ggcaagtaat
     2581 tagttgcagg gggtaatatt gcccaggcaa gtataagtca aataaatgaa ttgaccgatg
     2641 ccacgttttg ctaaatcggt tcaagttttg gtcaatgcga tgcaaggtta gctaaagagt
     2701 gacactttat ccttgtttac cccttatact tttcgctgat aacccagata cactggataa
     2761 caaccaccaa tgttagattt gtttaaagca attggcctgg ggctggtggt gttactgccg
     2821 ttagctaacc cattaacaac tgtcgcgtta tttcttggcc tggcaggcaa catgaacagt
     2881 gccgaacgta atcgtcagtc gttgatggcc tcggtgtacg tatttgccat catgatggtg
     2941 gcgtattacg ccgggcaact ggtgatggat acatttggca tttcgattcc cggtctgcga
     3001 attgcaggcg gcttaatcgt cgcgtttatc ggttttcgga tgctctttcc gcaacagaaa
     3061 gcgattgatt caccggaggc gaaaagcaag tcggaagagc tggaagatga acccagtgcc
     3121 aatattgcct ttgtgccgct agcaatgcca agtaccgctg gtccgggaac catagcgatg
     3181 attattagct cggcgtccac agtgcgtcag agttcaacct tcgctgattg ggtactgatg
     3241 gttgcgccgc cgctgatctt tttcctggtg gcggttattt tgtggggaag cctacgcagc
     3301 tccggcgcaa ttatgcggct ggtgggcaag ggtggcattg aagcgatctc ccgtctgatg
     3361 ggattcctgc tggtatgtat gggtgtgcag tttattatta acggcatcct ggaaatcatt
     3421 aaaacgtacc attaaaaaag gcccgaatgg gcctttcaac tattgcgtct gttcttcgag
     3481 tgtcactggc cagcggcgaa atataatgat tgaccatatt aacgcggcaa aagcaggcac
     3541 cgcgcccaca taaccaatca tcgacattga ccagtgcaaa ctcacctgat tacctaccaa
     3601 cgcacccgcc ccgattccaa tattaaatat gccggagaat agcgccatcg cgacgtcggt
     3661 agcatctggt gccagcgcca gcactttaac ctgcatacca agcccgatga tcatcatcgc
     3721 gatcccccag aaaatactca gcaccccgag gtgtatttca ctgttcgccg caggtagcag
     3781 cagtgccaga cacaccagca acagcgcaat cgccgtactc accaacgcag acgcatactg
     3841 attacccagt ttaccgaaaa tcacgctgcc aataatgccc gcaccaccga gtaataacag
     3901 taatgccgtg gcaaagttgg cgctgaatcc cgcaatgttt tgcacaaaag gctcgatata
     3961 gctgtatgcc gtgtaatggg cggtgacaac caccacagtt aacaaataaa tgctcatcaa
     4021 tgccgggcgg cggaacaata gcgggaggct tttcaatgaa ccggaatgct cactgggcag
     4081 taagggaagt aacttaatca ggcacaaaag ggtgataagc gccccaatac caatcgcgaa
     4141 gaaggtcatt cgccaaccga aatactgccc cacaatgcgc ccgagaggta aacctaagac
     4201 catcgccagt gctgtaccgg tggcaattaa actcaaggcc tgtgcccgct tcccggccgg
     4261 agccatacgg atcgccagag acgccgtaat cgaccagaaa atcgcatgtg caaaagccac
     4321 accaatgcga ctgatcacca gaacggtaaa gctccacgat aaaaacgaca gtacgtggct
     4381 ggcaataaac accacaaaca ggcagatcag taatttgcgc cgttcaacct gactggtcat
     4441 taacataaaa ggcaatgaca ttagcgctac tacccatgcg taaatggtca acatgatgcc
     4501 gacctgagcg gtttgcatgt gaaaactttg cgcaatgtca gagagcaggc caacagggac
     4561 aaattcggtg gtgttgaaga tgaaggcggc gactgccagc gtaacgaccc gtagccacgc
     4621 cactttgcgg gaaacagtgt ttgttgtcat aacagattat cgggtgagtt gcgaaaaagt
     4681 gatgaaatga tcttaaaacg gttaatgatg tgaatacaat gcatttgtga tctggatcgc
     4741 gttttccgtt tctctgacgc tgattctgtt ccgcgtcaga gagtcggtaa catcacggtt
     4801 taatgacgtt cagggaggtc tggcgttttg gcggttgcgg gtataggtgg tctgacaggg
     4861 gagcgaggcc tgtttttcac caggtcttcg tgagtaactt ttggcggcgt ttcatttttt
     4921 acaaacagtt tgagggtcct gcgcgccata tgcttgataa ttttatcatc acttaatgat
     4981 gctggcatca acacgtcatt cagatcactt tcattgggat tcataaattg gtgatagtgc
     5041 aataacatat tggcgaaaaa taaaaaaagt cctgaaaatg aggagattct tgttctgcta
     5101 aaagggataa aaagcagatg cagacttcgg gtagtacatg tttgttagaa cctaatgaat
     5161 ccatcaggct ttgcaataaa tcctctttta attcgccgtc tgttatgtcg agaatggcgg
     5221 tgatcaagtt aggatcttta ttgacgaacc atctgtgaac ctcagagtta ctccataatc
     5281 gggggagtat gacaaaatta ccgcgagaga taaaattcag gacaagcaaa tcaaactggc
     5341 gtaagtaatc tgcagcggta tggtgatccg gaggcagggg ttcaatatgt ggtgtatgcg
     5401 cttttttgat ggggacgcca aggtggatca ttggaaattg ttcaataaaa tcattcggaa
     5461 acagaaagag cacacgctcg acgccggtgt gaaatacgcg ccccatagtg acaggctttg
     5521 ggttgggagc gcaaaaatat taatttctcc atcatggcga aaattatcta aataaatagg
     5581 gtttaaattt attactacct gaaattcaat attttctttg tgtcttccat tcttgacggg
     5641 ataagtgagt ttaaactgaa ccttttcatt gtatagtgtg tcgttacccc gaaaagaagt
     5701 cctctgaata tatgataagt tatcaaggtt gttaaatatc ttttttgtgg ctgagttggt
     5761 gtttaaagac gtgcgccact cttcatcaca tattatggta ctgagtgcat caataaaatt
     5821 ctttaaaact tcttttacct gaggtgcaat attacgtacg ggaaaatcat caggaagaaa
     5881 tatgtaatta ctgatgctta ctggcgtaac catatttgcc ccatatagtc ataagtcatc
     5941 ggaacatcac tatatagggc atttgagctg caagaactat caaaaatagc tcattggtaa
     6001 ccctgttttg ccgagtcagg cacatccagt agttgaataa atgcctcaag cggacgcgtt
     6061 ttcgcaccac gacgccagac cagccaggtt gttaaccaac gccattgctc agctaacggc
     6121 cacgcttcaa cctggtgatg ccccggcata ctttccagca tagagcgtgg aataagcgca
     6181 atgcctgctc ctgcgaccac acaggccaac atcccgtgat acgactccat ctcgtgaata
     6241 gttcccggag cggcaccgtc agcatgaaac cagctctcga agtggcgacg atacgaacaa
     6301 ttggcgcgga aggcataaat gttactgccg ttaacctgac tggcgcggat tactggcgca
     6361 tgaccttgtg gcgtgacgat catcagctcc tcgcggtata ccggtatccc gtcaatggca
     6421 gtatggttaa tgggcccatc aataaatgcc gcattcagtt ttccctccag cactccttcc
     6481 agcatagtgc cggaagggcc ggtggaaagt gaaaactgaa ttttgggata acgatggttg
     6541 aattccgcca gcgtggccgg aatgcgcact gctgcggtgc tttccagcga accaagagaa
     6601 aataaacctt gcggctcatc gccagcgaca acgctccgcg cttcatccac taacgcgaga
     6661 atttgttggc tatagcgtaa aaagttatgc ccggcaggag agagacgtaa acgctgattc
     6721 tcgcgaataa acagatctac ccccagttct gtttccagct ggcgtagacg gatagtgaga
     6781 ttcgacggca cgcgaagcac tattgctgct gcctgggtta tgctgccagc ttcggcaacc
     6841 gcgttgaaca tctccagttg ggtcagatcc ataatattct cgattcgtga ataagtggct
     6901 taatattatt cattttaaag caagagtaaa tctgcgtatc ttcataccat gactcataaa
     6961 ggagataccc cgatgaccat tactccggca actcatgcaa tttcgataaa tcctgccacg
     7021 ggtgaacaac tttctgtgct gccgtgggct ggcgctaacg atatcgaaaa cgcacttcag
     7081 ctggcggcag caggctttcg cgactggcgc gagacaaata tagattatcg tgctgaaaaa
     7141 ctgcgtggta tcggtaaggc tctgcgcgcc cgtagcgaag aaatggcgca aatgatcacc
     7201 cgtgaaatgg gcaaaccaat caatcaggcg cgcgctgaag tggcgaaatc ggcgaatttg
     7261 tgtgactggt atgcagaaca tggtccggca atgctgaagg cggaacctac gctggtggaa
     7321 aatcagcagg cagttattga gtatcgaccg ttggggatga ttctggcgat tatgccgtgg
     7381 aactttccgt tatggcaggt gatgcgtggc gcggttccca tcattcttgc aggtaacggc
     7441 tacttactta aacatgcgcc gaatgtgatg ggctgtgctc agctcattgc ccaggtgttt
     7501 aaagatgcgg gaatcccgca aggcgtatat ggctggctga atgccgacaa cgacggtgtc
     7561 agtcaaatga ttaaagattc gcgcattgct gctgtcacgg tgaccggaag tgttcgtgcg
     7621 ggagcggcta ttggcgcaca ggctggagcg gcactgaaaa aatgcgtact ggaactgggc
     7681 ggttcggatc catttattgt gcttaacgat gccgatctgg aactggcggt taaagcggcg
     7741 gtagccggac gttatcagaa taccggacag gtttgtgcag cggcaaaacg ctttattatc
     7801 gaagagggaa ttgcttctgc atttaccgaa cgttttgtgg cagctgcggc agccattgaa
     7861 aatgggcgat ccccgtgatg aagagaacgc tctcggacca atggctcgtt ttgatttacg
     7921 tgatgagctg catcatcagg tggagaaaac cctggcgcag ggtgcgcgtt tgttactggg
     7981 cggggaaaag atggctgggg caggtaacta ctatccgcca acggttctgg cgaatgttac
     8041 cccagaaatg accgcgtttc gggaagaaat gtttggccct gttgcggcaa tcaccgttgc
     8101 gaaagatgca gaacatgcgc tggaactggc taatgatagt gagttcggcc tttcagcgac
     8161 catttttacc accgacgaaa cacaggccag acagatggcg gcacgtctgg aatgcggtgg
     8221 ggtgtttatc aatggttatt gtgccagcga cgcgcgagtg gcctttggtg gcgtgaaaaa
     8281 gagtggcttt ggtcgtgagc tttcccattt cggcttacac gaattctgta atatccagac
     8341 ggtgtggaaa gaccggatct gacgcgacat attcagctct gatatactcg caggtctttt
     8401 cagacctgcg gtccaggagt agaaagtggc agtcgccatg gataatgcaa ttttagaaaa
     8461 catcttgcgg caagtgcggc cgctcattgg tcagggtaaa gtcgcggatt atattccggc
     8521 gctggctaca gtagacggtt cccgattggg cattgctatc tgtaccgttg acggacagct
     8581 ttttcaggcc ggagacgcgc aagaacgttt ttccattcag tctatttcca aagtgctgag
     8641 tctcgttgtc gccatgcgtc attactccga agaggaaatc tggcaacgcg tcggcaaaga
     8701 tccgtctgga tcaccgttca attctttagt gcaactggaa atggagcagg gtattccgcg
     8761 taatccgttt attaatgctg gtgcgctggt ggtctgcgat atgttgcaag ggcgattaag
     8821 cgcaccacgg caacgtatgc tggaagtcgt gcgcggctta agcggtgtgt ctgatatttc
     8881 atacgatacg gtggtagcgc gttccgaatt tgaacattcc gcgcgaaatg cggctatcgc
     8941 ctggctgatg aagtcgtttg gcaatttcca tcatgacgtg acaaccgttc tgcaaaacta
     9001 ctttcattac tgcgctctga aaatgagctg tgtagagctg gcccggacgt ttgtctttct
     9061 ggctaatcag gggaaagcta ttcatattga tgaacctgtg gtgacgccaa tgcaggcgcg
     9121 gcaaattaac gcgctgatgg cgaccagtgg tatgtaccag aacgcggggg agtttgcctg
     9181 gcgggtgggg ctaccggcga aatctggcgt tggtggcggt attgtggcga ttgttccgca
     9241 tgaaatggcc atcgctgtct ggagtccgga actggatgat gcaggtaact cgcttgcggg
     9301 tatcgccgtc cttgaacaat tgacgaaaca gttagggcgt tcggtttatt aatgcagtct
     9361 ctcgatccac tcttcgcgcg tttatcccgt tcaaaatttc gctctcgctt tcgtctgggc
     9421 atgaaagagc gtcagtattg cctggagaaa ggcgcgccag tcatcgaaca acatgcggcg
     9481 gattttgtcg ctaaacgtct tgctccggca ttaccggcta atgacggtaa gcaaacaccc
     9541 atgcgcgggc atccggtgtt tatcgctcag cacgccaccg cgacctgctg tcgcggttgt
     9601 ctggctaagt ggcataacat tccgcagggt gtttcgttaa gcgaagaaca acaacgttat
     9661 atcgtggcgg taatctatca ctggctggtt gtacagatga atcagccatg agaattgcgg
     9721 aaaacgataa aatagcattc ccagggtacc tttatttgcc gccgctgtta gcgaacatgc
     9781 tatcctttat gagaatttac ttattacgtt gagataattg ccacccgcaa ttgtatggac
     9841 agataattaa tgcatgtaca ccccatttca actttccgtt tgttccagga aggtcatctg
     9901 ctacgtaata gcatcgctat ttttgcgcta accacgctgt tctattttat tgttgcagag
     9961 ttacggctgg ttcacgaact ttctcttttc tggccgctga atggcgtaat ggcgggggtg
    10021 tttgcccgct atgtctggct taatcgactg cattactatg cgatcagtta tgtggtgatg
    10081 ctggtttatg atgccataac caccgaatgg ggactggttt cactggttat caatttctcc
    10141 aatatgatgt ttattgttac cgtcgcctta ctggtcgtgc gggataagcg tctggggaaa
    10201 aataagtatg agccagtaag tgccttacgg ctatttaatt actgtctgat tgccgcatta
    10261 ttatgcgcta ttgtcggggc gattggttcg gtcagtattg atagtctgga tttctggcct
    10321 ttgcttgcgg actggttcag tgagcaattc tcaacgggcg tgttgatcgt gccttgtatg
    10381 ctgacgttgg ctattcctgg agtgctgccg cgctttaaag cagaacagat gatgcccgcc
    10441 atcgcgctta ttgtgtcggt tattgcctcg gtagtcattg gcggagcggg gagtctggcg
    10501 ttcccgctgc ctgcattaat ctggtgtgca gtgcgctata cgccgcaggt aacatgtctg
    10561 ttgacctttg tcaccggtgc ggtggaaatc gtactggtgg caaattcggt gattgatatc
    10621 tcggtcggtt cgccgttctc cattccggaa atgttctccg cacgtctcgg tattgccacg
    10681 atggcgatat gcccaattat ggtttctttt agcgtggcag cgatcaattc gctaatgaag
    10741 caagttgcgc tgcgagccga ctttgatttt ctgactcagg tttactcacg gtccggtctt
    10801 tatgaggcgc tgaaaagtcc atcgctgaaa cagacacaac atctgacggt catgctgctt
    10861 gatatcgact atttcaaaag cattaacgat aactatggac atgaatgtgg cgataaagtg
    10921 ttaagcgtgt ttgcccggca tattcagaag attgtcggtg ataaggggct ggtggcgcgc
    10981 atgggcggcg aagaatttgc tgttgcagtg ccgtcggtga atcctgtcga tggtctgcta
    11041 atggcggaaa aaatccgtaa aggcgttgaa ctgcaaccat tcacctggca acaaaaaacg
    11101 ctttatctca cggtaagtat tggcgtcggt agtggtcgcg catcgtaccg aacgctgacc
    11161 gatgatttta ataaattgat ggtcgaagcc gatacgtgtc tgtatcgctc gaagaaagat
    11221 gggcgcaacc gtaccagcac tatgcgttac ggtgaggaag ttgtctgaca tctttattca
    11281 ttccgcgcga tttgaatgca atgtgttcta ccactttatg atccaggaaa aggcgtattt
    11341 cctcgattaa accatgatcc gcgccacact tttctcataa aactgctcat taatcatcag
    11401 gagttgatca aaacaggggt tcggcgtatt aaattttgct aacctgtcgt accaattcaa
    11461 gcgggttgta tgactaatca gaagggaacc cattgtgaaa acactaaatc gtcgcgatat
    11521 tcccggtgca cagtatccag aacgtatcat tcagtttggt gaaggtaact tcctgcgcgc
    11581 ctttgttgac tggcaaatcg atctcctgaa tgagcacacc gatctgaatt ctggcgtggt
    11641 cgttgttcgt ccgattgaaa cttcattccc gccgtcactg agcacgcagg atggtctgta
    11701 caccaccatt atccgtggcc tgaatgagaa ggggtgaagt ggtcaacaaa aactggccac
    11761 cgagttagag tttttccagt atcg
//
LOCUS       DADMJE010000133        11774 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.134, whole genome shotgun sequence.
ACCESSION   DADMJE010000133 DADMJE010000000
VERSION     DADMJE010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11774)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11774)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11774
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.134"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(10..660)
                     /gene="hxpA"
                     /locus_tag="JN001_003148"
     CDS             complement(10..660)
                     /gene="hxpA"
                     /locus_tag="JN001_003148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HpxA"
                     /protein_id="HAY9054301.1"
                     /translation="MRCKGFLFDLDGTLVDSLPAVERAWSNWARRHGLAPEEVLAFIH
                     GKQAITSLRHFMAGKSEADIAAEFTCLEHIEATETEGITALPGAIALLNHLNKAGIPW
                     AIVTSGSMPVARARHKIAGLPAPEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQECVV
                     AEDAPAGVLSGLAAGCHVIAVNAPADTPRLNEVDLVLHSLEQITVTKQLNGDVIIQ"
     gene            complement(671..1165)
                     /locus_tag="JN001_003149"
     CDS             complement(671..1165)
                     /locus_tag="JN001_003149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007371080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfbU family protein"
                     /protein_id="HAY9054302.1"
                     /translation="MEMTNAQRLILSNQYKMMTMLDPANAERYRRLQTIIERGYGLQM
                     RELDREFGELKEETCRTIIDIMEMYHALHVSWSNLQDQQSIDERRVTFLGFDAATEAR
                     YLGYVRFMVNVEGRYTHFDAGTHGFNAQTPMWEKYQRMLNVWHACLRQYHLSANEINQ
                     IINA"
     gene            complement(1249..1704)
                     /locus_tag="JN001_003150"
     CDS             complement(1249..1704)
                     /locus_tag="JN001_003150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF412 domain-containing protein"
                     /protein_id="HAY9054303.1"
                     /translation="MSTPDNRSVNFFSLFRRGQHYSKTWPLEKRLAPVFVENRVIKMT
                     RYAIRFMPPIAVFTLCWQIALGGQLGPAVATALFALSLPMQGLWWLGKRSVTPLPPAI
                     LNWFYEVRGKLQESGQVLAPVEGKPDYQALADTLKRAFKQLDKTFLDDL"
     gene            2042..3244
                     /gene="ackA"
                     /locus_tag="JN001_003151"
     CDS             2042..3244
                     /gene="ackA"
                     /locus_tag="JN001_003151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005129491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HAY9054304.1"
                     /translation="MSSKLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARI
                     KWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSAQLTAIGHRIVHGGEKYTSS
                     VVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEE
                     SYLYALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVS
                     AIRNGKCVDTSMGLTPLEGLVMGTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGL
                     LGLTEVTSDCRYVEDNYATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGI
                     GENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINKEGTRPAVVIPTNEELVIA
                     QDASRLTA"
     gene            3319..5463
                     /gene="pta"
                     /locus_tag="JN001_003152"
     CDS             3319..5463
                     /gene="pta"
                     /locus_tag="JN001_003152"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HAY9054305.1"
                     /translation="MSRIIMLIPTGTSVGLTSVSLGVIRAMERKGVRLSVFKPIAQPR
                     TGGDAPDQTTTIVRANSSTTTAAEPLKMSYVEGLLSSNQKDVLMEEIVANYHANTKDA
                     EVVLVEGLVPTRKHQFAQSLNYEIAKTLNAEIVFVMSQGTDTPEQLKERIELTRNSFG
                     GAKNTNITGVIVNKLNAPVDEQGRTRPDLSEIFDDSSKAKVNNVDPAKLQESSPLPVL
                     GAVPWSFDLIATRAIDMARHLNATIINEGDINTRRVKSVTFCARSIPHMLEHFRAGSL
                     LVTSADRPDVLVAACLAAMNGVEIGALLLTGGYEMDARISKLCERAFATGLPVFMVNT
                     NTWQTSLSLQSFNQEVPVDDHERIEKVQEYVANYINADWIESLTATSERSRRLSPPAF
                     RYQLTELARKAGKRIVLPEGDEPRTVKAAAICAERGIATCVLLGNPAEINRVAASQGV
                     ELGAGIEIVDPEVVRESYVGRLVELRKNKGMTETVAREQLEDNVVLGTLMLEQDEVDG
                     LVSGAVHTTANTIRPPLQLIKTAPGSSLVSSVFFMLLPEQVYVYGDCAINPDPTAEQL
                     AEIAIQSADSAAAFGIEPRVAMLSYSTGTSGAGSDVEKVREATRLAQEKRPDLMIDGP
                     LQYDAAVMADVAKSKAPNSPVAGRATVFIFPDLNTGNTTYKAVQRSADLISIGPMLQG
                     MRKPVNDLSRGALVDDIVYTIALTAIQSAQQQ"
     gene            5653..7173
                     /gene="yfcC"
                     /locus_tag="JN001_003153"
     CDS             5653..7173
                     /gene="yfcC"
                     /locus_tag="JN001_003153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative basic amino acid antiporter YfcC"
                     /protein_id="HAY9054306.1"
                     /translation="MSAITESKPTRRWAMPDTLVIIFFVAILTSLATWVVPVGMFDSQ
                     EVQYQVDGQTKTRKVVEPHSFRILTNEAGEPEYHRVQLFTTGDERPGLMNFPFEGLTS
                     GSKYGTAVGIIMFMLVIGGAFGIVMRTGTIDNGILALIRHTRGNEILFIPALFILFSL
                     GGAVFGMGEEAVAFAIIIAPLMVRLGYDSITTVLVTYIATQIGFASSWMNPFCVVVAQ
                     GIAGVPVLSGSGLRIVVWVIATMIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQAD
                     VEQRPFTFGDWLVLIVLTAVMVWVIWGVIVNAWFIPEIASQFFTMGLVIGIIGVVFRL
                     NGMTVNTMASSFTEGARMMIAPALLVGFAKGILLLVGNGEAGDASVLNTILNSIANAI
                     SGLDNAVAAWFMLLFQAVFNFFVTSGSGQAALTMPLLAPLGDLVGVNRQITVLAFQFG
                     DGFSHIIYPTSASLMATLGVCRVDFRNWLKVGATLLGLLFIMSSVVVIGAQLMGYH"
     gene            complement(7206..7748)
                     /gene="yfcD"
                     /locus_tag="JN001_003154"
     CDS             complement(7206..7748)
                     /gene="yfcD"
                     /locus_tag="JN001_003154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase YfcD"
                     /protein_id="HAY9054307.1"
                     /translation="MEQRRLASTEWVDIVNEENEVIAQASREQMRAQCLRHRATYIVV
                     HDGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVPFAE
                     HGQFYFEDKNCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITARCDEFTPDSLKA
                     LALWMKRNAKNEAVETETAE"
     gene            complement(7806..8357)
                     /gene="yfcE"
                     /locus_tag="JN001_003155"
     CDS             complement(7806..8357)
                     /gene="yfcE"
                     /locus_tag="JN001_003155"
                     /EC_number="3.1.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311211.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphodiesterase"
                     /protein_id="HAY9054308.1"
                     /translation="MKLMFASDIHGSLPATERVLELFAQSGAQWLVILGDVLNHGPRN
                     ALPEGYAPAKVAERLNEVAHKVIAVRGNCDSEVDQMLLHFPITAPWQQVLLEKQRLFL
                     THGHLFGPENLPALNQNDVLVYGHTHLPVAEQRGEIFHFNPGSVSIPKGGNPASYGML
                     DNDVLSVIALNDQSIIAQVAINP"
     gene            complement(8413..9045)
                     /gene="yfcF"
                     /locus_tag="JN001_003156"
     CDS             complement(8413..9045)
                     /gene="yfcF"
                     /locus_tag="JN001_003156"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione transferase"
                     /protein_id="HAY9054309.1"
                     /translation="MSKPAITLWSDAHFFSPYVLSAWVALQEKGLSFHIKTIDLDSGE
                     HLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAPPTWERIYPLDLENRARA
                     RQIQAWLRSDLMPIREERPTDVVFAGAKKAPLTAEGKASVAMAEHLLALGQPNLFGEW
                     CIADTDLALMINRLVLHGDEVPERLVDYATFQWQRASVQRFIALSAKQSG"
     gene            9181..9828
                     /gene="yfcG"
                     /locus_tag="JN001_003157"
     CDS             9181..9828
                     /gene="yfcG"
                     /locus_tag="JN001_003157"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GSH-dependent disulfide bond oxidoreductase"
                     /protein_id="HAY9054310.1"
                     /translation="MIDLYFAPTPNGHKITLFLEEAELDYRLIKVDLGKGGQFRPEFL
                     RISPNNKIPAIVDHSPADGGEPLSLFESGAILLYLAEKTGLFLSHETRERAATLQWLF
                     WQVGELGPMLGQNHHFNHAAPQTIPYAIERYQVETQRLYHVLNKRLENSPWLGGENYS
                     IADIACWPWVNAWTRQRIDLTMYPAVKNWHERIRSRPATGQALLKAQLGDERSDS"
     gene            9885..10247
                     /gene="folX"
                     /locus_tag="JN001_003158"
     CDS             9885..10247
                     /gene="folX"
                     /locus_tag="JN001_003158"
                     /EC_number="5.1.99.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate 2'-epimerase"
                     /protein_id="HAY9054311.1"
                     /translation="MAQPAAIIRIKNLRLRTFIGIKEEEINNRQDIVINVTIHYPADK
                     ARTSEDINDALNYRTVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDK
                     LHALRYADSVSMTLSWQR"
     gene            10268..11161
                     /locus_tag="JN001_003159"
     CDS             10268..11161
                     /locus_tag="JN001_003159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family protein"
                     /protein_id="HAY9054312.1"
                     /translation="MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVLGPR
                     VTLWQGLADQSNLNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS
                     DTPPSVLISGSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCL
                     LRTGVVLAPDGGILGKMLPPFRLGLGGPIDSGRQYLAWIHIDDMVNGILWLLDNELRG
                     PFNMVSPYPVRNEQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRL
                     EEAGFAFRWYDLEEALADVVR"
     gene            complement(11209..>11774)
                     /locus_tag="JN001_003160"
     CDS             complement(11209..>11774)
                     /locus_tag="JN001_003160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="Rpn family recombination-promoting
                     nuclease/putative transposase"
                     /protein_id="HAY9054313.1"
                     /translation="GYKELPLVIPMLFYHGCRSPYPYSLCWLDEFAEPAIARKIYSSA
                     FPLVDITVVPDDEIMQHRKMALLELIQKHIRQRDLLGLVDQIVSLLVTGNTNDRQLKA
                     LFNYVLQTGDAQRFRAFIGEIAERAPQEKEKLMTIADRLREEGAMQGKHEEALRIAQE
                     MLDRGLDRELVMMVTRLSPDDLIAQSH"
BASE COUNT         2818 a         3121 c         2945 g         2890 t
ORIGIN      
        1 tcaggtgttt cactgaataa taacatcgcc atttagctgt ttggtcacag taatttgctc
       61 cagactgtgg aggaccaaat cgacctcatt caggcgcggg gtatctgccg gagcgttaac
      121 cgcaatgaca tggcaacccg ccgccaggcc agaaagcacg ccagcgggag catcttccgc
      181 caccacacac tcctgcggcg caagccccag cagctgcgca cctaacagat acgcatcagg
      241 ttctggtttt ccgcgcttca ctcgctcagc ggttacaaac acctctggtg cgggaagccc
      301 agctatttta tggcgcgctc gcgctaccgg catggagcca gaagtcacaa tggcccacgg
      361 aatacctgct ttattcaaat gattgagtaa ggcgattgcc cccggaagcg cggtaatacc
      421 ttcggtttcc gtggcctcga tgtgctccag acacgtaaac tcggcggcaa tatcagcctc
      481 ggatttgccc gccataaaat ggcgcaaaga ggtgatcgcc tgtttaccgt gaatgaaagc
      541 cagcacctct tccggcgcta acccatgacg tctggcccag ttgctccacg cccgttctac
      601 cgcaggcagg gaatccacca gcgttccatc aagatcaaac agaaaacctt tgcaccgcac
      661 gcgggcctcc tcaggcgttg ataatttgat taatttcgtt ggcgctcaaa tggtactgac
      721 gcaggcaggc atgccacaca ttaagcatgc gctgatattt ttcccacatt ggcgtctggg
      781 cgttaaaacc atgagtccca gcgtcaaaat gggtatagcg cccttccaca ttaaccataa
      841 agcggacata accgaggtaa cgtgcttcag tggcggcgtc aaagccgagg aaggtgacac
      901 gacgttcatc gatggattgc tggtcctgca aattagacca ggaaacatgc aacgcatgat
      961 acatctccat aatgtcgatg atagtgcggc aggtttcttc tttcagctcg ccaaactcgc
     1021 gatccaattc acgcatctgt aatccgtaac cacgctcaat aattgtttgc aggcgacggt
     1081 aacgttcagc atttgccgga tcgagcatag tcatcatctt gtactgatta gacaaaataa
     1141 gacgttgcgc gttggtcatt tccattgttg actcctgtat cactctacta cggtgaaaaa
     1201 aaaagaaggc tgagtatgcc ttcttttata tgcgtaatca ggggtcaatt acaaatcatc
     1261 aaggaaagtt ttatccagtt gtttgaaggc gcgcttaagc gtgtcagcta atgcctggta
     1321 atcaggcttg ccttcaacgg gtgccaacac ctgtccagac tcctgcaatt taccgcgaac
     1381 ttcataaaac cagttgagga tagcaggggg taatggcgtt acagaacgct tgcccagcca
     1441 ccataatccc tgcatgggta aacttaaggc gaacagcgca gtggcaactg ccggcccaag
     1501 ctgaccgccc agggcaatct gccagcagag agtaaatacg gcgatcggcg gcataaaacg
     1561 gatcgcataa cgcgtcatct tgataacgcg attttcgaca aagaccgggg caaggcgttt
     1621 ttccagcggc cacgtctttg agtaatgctg tccccggcga aacaagctaa aaaaattaac
     1681 agaacgatta tccggcgttg acatgcttca cctcaacttc acatataaag attcaaaaat
     1741 ttgtgcaaat tcacaactca gcgggacaac attcaaaaca ttttgtcttc catacccact
     1801 atcaggtatc ctttagcagc ctgaaggcct aagtagtaca tattcattga gtcgtcaaat
     1861 tcatatacat tatgccattg gctgaaaatt acgcaaaatg gcatagactc aagatatttc
     1921 ttccatcatg caaaaaaaat ttgcagtgca tgatgttaat cataaatgtc ggtgtcatca
     1981 tgcgctacgc tctatggctc cctgacgttt ttttagccac gtatcaatta taggtacttc
     2041 catgtcgagt aagttagtac tggttctgaa ctgcggtagt tcttcactga aatttgccat
     2101 catcgatgca gtaaatggtg aagagtacct ttctggttta gccgaatgtt tccacctgcc
     2161 cgaagcacgt atcaaatgga aaatggacgg caataaacag gaagcggctt taggtgcagg
     2221 cgccgctcac agcgaagcgc tcaactttat cgttaatact attctggcac aaaaaccaga
     2281 actgtctgcg cagctgactg ctatcggtca ccgtatcgta cacggcggcg aaaagtatac
     2341 cagctccgta gtgatcgatg agtctgttat tcagggtatc aaagatgcag cttcttttgc
     2401 accgctacac aacccggctc acctgatcgg tatcgaagaa gctctgaaat ctttcccaca
     2461 gctgaaagac aaaaacgttg ctgtatttga caccgcgttc caccagacta tgccggaaga
     2521 gtcttacctc tacgccctgc cttacaacct gtacaaagag cacggcatcc gtcgttacgg
     2581 cgcgcacggc accagccact tctatgtaac ccaggaagcg gcaaaaatgc tgaacaaacc
     2641 ggtagaagaa ctgaacatca tcacctgcca cctgggcaac ggtggttccg tttctgctat
     2701 ccgcaacggt aaatgcgttg acacctctat gggcctgacc ccgctggaag gtctggtcat
     2761 gggtacccgt tctggtgata tcgatccggc gatcatcttc cacctgcacg acaccctggg
     2821 catgagcgtt gacgcaatca acaaactgct gaccaaagag tctggcctgc tgggtctgac
     2881 cgaagtgacc agcgactgcc gctatgttga agacaactac gcgacgaaag aagacgcgaa
     2941 gcgcgcaatg gacgtttact gccaccgcct ggcgaaatac atcggtgcct acactgcgct
     3001 gatggatggt cgtctggacg ctgttgtatt cactggtggt atcggtgaaa atgccgcgat
     3061 ggttcgtgaa ctgtctctgg gcaaactggg cgtgctgggc tttgaagttg atcatgaacg
     3121 caacctggct gcacgtttcg gcaaatctgg tttcatcaac aaagaaggta cccgtcctgc
     3181 ggtggttatc ccaaccaacg aagaactggt tatcgcgcaa gacgcgagcc gcctgactgc
     3241 ctgatttcac accgccagct cagctggcgg tgctgttttg taacccgcca aatcggcggt
     3301 aacgaaagag gataaaccgt gtcccgtatt attatgctga tccctaccgg aaccagcgtc
     3361 ggtctgacca gcgtcagcct tggcgtgatc cgtgcaatgg aacgcaaagg cgttcgtctg
     3421 agcgttttca aacctatcgc tcagccgcgt accggtggcg atgcgcccga tcagactacg
     3481 actatcgtgc gtgcgaactc ttccaccacg acggccgctg aaccgctgaa aatgagctac
     3541 gttgaaggtc tgctttccag caatcagaaa gatgtgctga tggaagagat cgtcgcaaac
     3601 taccacgcta acaccaaaga cgctgaagtc gttctggttg aaggtctggt cccgacacgt
     3661 aagcaccagt ttgcccagtc tctgaactac gaaatcgcta aaacgctgaa tgcggaaatc
     3721 gtcttcgtta tgtctcaggg cactgacacc ccggaacagc tgaaagagcg tatcgaactg
     3781 acccgcaaca gcttcggcgg tgccaaaaac accaacatca ccggcgttat cgttaacaaa
     3841 ctgaacgcac cggttgatga acagggtcgt actcgcccgg atctgtccga gattttcgac
     3901 gactcttcca aagctaaagt aaacaatgtt gatccggcga agctgcaaga atccagcccg
     3961 ctgccggttc tcggcgctgt gccgtggagc tttgacctga tcgcgactcg tgcgatcgat
     4021 atggctcgcc acctgaatgc gaccatcatc aacgaaggcg acatcaatac tcgccgcgtt
     4081 aaatccgtca ctttctgcgc acgcagcatt ccgcacatgc tggagcactt ccgtgccggt
     4141 tctctgctgg tgacttccgc agaccgtcct gacgtgctgg tcgccgcttg cctggcagcc
     4201 atgaacggcg tagaaatcgg tgccctgctg ctgactggcg gctacgaaat ggacgcgcgc
     4261 atttctaaac tgtgcgaacg tgctttcgct accggcctgc cggtatttat ggtgaacacc
     4321 aacacctggc agacctctct gagcctgcag agcttcaacc aggaagttcc ggttgacgat
     4381 cacgaacgta tcgagaaagt tcaggaatac gttgctaact acatcaacgc tgactggatc
     4441 gaatctctga ctgccacttc tgagcgcagc cgtcgtctgt ctccgcctgc gttccgttat
     4501 cagctgactg aacttgcgcg caaagcgggc aaacgtatcg tactgccgga aggtgacgaa
     4561 ccgcgtaccg ttaaagcagc cgctatctgt gctgaacgtg gtatcgcaac ttgcgtactg
     4621 ctgggtaatc cggcagagat caaccgtgtt gcagcgtctc agggtgtaga actgggtgca
     4681 gggattgaaa tcgttgatcc agaagtggtt cgcgaaagct atgttggtcg tctggtcgaa
     4741 ctgcgtaaga acaaaggcat gaccgaaacc gttgcccgcg aacagctgga agacaacgtg
     4801 gtgctcggta cgctgatgct ggaacaggat gaagttgatg gtctggtttc cggtgctgtt
     4861 cacactaccg caaacaccat ccgtccgccg ctgcagctga tcaaaactgc accgggcagc
     4921 tccctggtat cttccgtgtt cttcatgctg ctgccggaac aggtttacgt ttacggtgac
     4981 tgtgcgatca acccggatcc gaccgctgaa cagctggcag aaatcgcgat tcagtccgct
     5041 gattccgctg cggccttcgg tatcgaaccg cgcgttgcta tgctctccta ctccaccggt
     5101 acttctggtg caggtagcga cgtagaaaaa gttcgcgaag caactcgtct ggcgcaggaa
     5161 aaacgtcctg acctgatgat cgacggtccg ctgcagtacg acgctgcggt aatggctgac
     5221 gttgcgaaat ccaaagcgcc gaactctccg gttgcaggtc gcgctaccgt gtttatcttc
     5281 ccggatctga acaccggtaa caccacctac aaagcggtac agcgttctgc cgacctgatc
     5341 tccatcgggc cgatgctgca gggtatgcgc aagccggtta acgacctgtc ccgtggcgca
     5401 ctggttgacg atatcgtcta caccatcgcg ctgactgcga ttcagtctgc acagcagcag
     5461 taatctcgtc atcatccgca gctttgcgct gcggatatct gaaccggaaa taatcactat
     5521 ttccggtttt ttattctctt aatctgcatt aatcctttct gattatcttg cttaactgcg
     5581 ctgcatcaat gaattgcgcc atttcacttt gcatacttac cactttgttt tgtgcaaggg
     5641 aatatttgcg ctatgtccgc aatcactgaa tccaaaccaa caagaagatg ggcaatgccc
     5701 gatacgttgg tgattatctt ttttgttgct attttaacca gccttgccac ctgggtagtt
     5761 ccggtgggga tgtttgacag tcaggaagtg cagtatcagg ttgatggtca aacaaaaaca
     5821 cgcaaagtcg tagagccaca ctcatttcgc attctgacta acgaagcagg cgaacctgag
     5881 tatcaccgcg tacagctgtt cacgacgggc gatgaacgcc cgggcctgat gaacttcccg
     5941 tttgaaggat taacctcagg atcgaaatac gggacagctg ttggcatcat catgtttatg
     6001 ctggtgattg gcggcgcgtt tggcattgtg atgcgtacag gaaccattga taacggtatc
     6061 ctggcgctta ttcgccatac ccgcgggaat gaaattctct ttattcctgc gctgtttatt
     6121 ctgttttcac ttggcggcgc ggtatttggt atgggagaag aggccgtcgc ctttgccatt
     6181 atcatcgcac cgctaatggt ccggctgggc tatgacagta ttaccaccgt cctggtgacc
     6241 tatattgcca cgcaaatcgg ttttgccagt tcgtggatga acccgttttg tgtggtcgtt
     6301 gctcagggga ttgccggcgt tccggtgctt tctggctccg ggttgcgcat cgtggtgtgg
     6361 gttatcgcca ctatgattgg cctgatcttt accatggtgt acgcctcacg agtgaaaaag
     6421 aatcctcttc tgtcacgcgt gcatgagtcc gaccgcttct ttcgtgaaaa gcaggcggat
     6481 gttgaacaac gtccgtttac ctttggtgac tggctggtat tgattgtcct gaccgccgta
     6541 atggtctggg tgatttgggg cgtgatcgtt aatgcctggt ttattccaga aattgccagc
     6601 cagttcttca ccatgggtct ggtgattggc atcatcggcg ttgttttccg ccttaacggc
     6661 atgacggtta ataccatggc ttcatccttt accgaagggg cgcgaatgat gatcgcccct
     6721 gccctgctgg tgggtttcgc caaagggatt ttgctgctgg tcggtaatgg tgaagcgggt
     6781 gatgccagcg tgttaaatac catcctcaac agcattgcca atgccattag cggtctggac
     6841 aacgcggtcg cggcctggtt tatgttgctc ttccaggcgg tatttaattt cttcgtgacg
     6901 tccggttctg gtcaggcggc gttaaccatg ccgttactgg caccgcttgg cgatctggtc
     6961 ggtgttaacc gtcagattac cgtgctggca ttccagtttg gtgatggctt cagtcacatc
     7021 atttacccaa cctcagcttc gttaatggca actctcggtg tgtgcagggt ggacttccgt
     7081 aactggctga aggtgggcgc gaccctactt ggactgctgt ttattatgtc cagcgtcgta
     7141 gtgatcggcg ctcagttgat gggctaccac taaaaatgtt aagagccgca attgcggctc
     7201 ttttttcatt ctgccgtttc agtctctacg gcttcatttt tggcattgcg cttcatccac
     7261 aacgccagcg ctttcagcga gtctggagtg aactcatcgc agcgtgcggt gatttcttcc
     7321 ggcgtcagcc agcaaacttc actgacttca tcttcctgta gggcgaaggg accgtgagag
     7381 acgcagctga acaacgcgcc ccagacacgg caatttttat cttcgaaata gaactgcccg
     7441 tgctcggcaa aggggacacc ggcaatgccc aactcttctt ccgcttcgcg acgcgcggat
     7501 tccagcagtt gctcatcggc ctgaaccaca ccgcctgcgg tcgcatctaa catgccgggt
     7561 aaaaagtctt ttgtctcggt acgacgctgg accagaattt tgcccatgcc atcatgcacg
     7621 acgatgtaag ttgcacgatg acgcagacac tgtgcccgca tttgttcccg gctggcttgt
     7681 gcaatgactt cgttctcttc attgacaata tccacccatt cagtacttgc caaacgacgc
     7741 tgttccatta tcaggaaacc ttctttttct ggcgctctta cggcgcattt tgagttgtgg
     7801 gtaaattacg gattaatcgc gacctgcgca atgatacttt gatcattgag tgcgattaca
     7861 ctaagtacgt cattatccag catgccataa ctcgccggat taccgccttt cggaatactc
     7921 accgagccgg ggttgaagtg gaaaatctcc ccccgctgtt ctgccactgg cagatgggta
     7981 tgaccgtaca ccagcacatc gttctggttt aaagcaggta gattttccgg gccaaaaaga
     8041 tgaccatgcg tcaaaaacag acgttgtttt tccagtaata cctgttgcca cggcgcggtt
     8101 atcgggaaat gcagcagcat ttgatccact tcgctgtcgc agttgccgcg cacagcgata
     8161 accttatgtg ccacttcatt aagccgttca gcgactttgg ctggcgcgta accctccggt
     8221 aaagcattac gcgggccgtg attcaacacg tcgccaagga tcaccagcca ctgggcaccg
     8281 ctttgggcaa acaactccag aacacgttcc gtcgccggta acgacccatg aatgtccgat
     8341 gcaaacatca gtttcatcac tcactcctcg tcgaaaaaac gtaagctatg atactggatt
     8401 ctgtcgttgc tatcagccag attgcttcgc cgaaagtgca ataaaacgct ggacagacgc
     8461 tcgctgccac tggaatgtcg cataatccac caggcgttct ggcacctcat cgccatgtag
     8521 taccaggcgg ttaatcatta gcgccagatc agtatcagca atgcaccatt caccaaataa
     8581 attcggctga cccagtgcta acaaatgttc tgccatcgcg acactggctt ttccctcggc
     8641 cgttagtggc gcttttttcg cccccgcaaa gacaacatcc gtcggacgct cttcgcggat
     8701 gggcatcaga tcgctgcgca gccaggcctg aatctgtcgt gcacgcgcac gattttctaa
     8761 atcaagcgga taaatacgtt cccaggtcgg tggcgcaaat cgatcttcca gatactccgc
     8821 aatggcagaa gattcactca actcaaaatc atcgatttgt aataacggca cacggcgtgt
     8881 ctgaccgtaa ccttgccacg tcggctgcaa atgttcaccg ctgtcgaggt cgatggtctt
     8941 gatatgaaac gacaggcctt tttcctgcaa cgccacccaa gcggataaca cataagggga
     9001 gaaaaagtgg gcatctgacc aaagcgtgat agcgggttta ctcattatgt cctcggcaat
     9061 aaaggaggct ggctatcaaa ctatagagcc tttttgtcac tgtcacgtga cgaatactca
     9121 cgtaagtcgc cgcgctttct atacttgtgg tgttcagatg attaaacaac cggagctgca
     9181 atgatcgatc tctatttcgc cccgacaccc aatggtcaca aaattacgct gtttctcgaa
     9241 gaagcagagc ttgattatcg cttgattaag gtagacctgg ggaaaggcgg tcagtttcgt
     9301 ccggaatttt tgcgcatttc gcccaacaac aaaattccgg caattgttga tcattctcct
     9361 gccgatggcg gcgaaccgct aagcctcttt gaatctggtg ccattttgtt gtatctggct
     9421 gagaaaacgg ggctcttttt gagtcatgaa acgcgtgaac gcgccgccac attacagtgg
     9481 ttattctggc aggtaggcga actggggccg atgcttgggc aaaatcatca ttttaatcac
     9541 gcagcccccc aaaccattcc ttacgctatt gaacgttatc aggttgaaac tcagcgtctt
     9601 taccatgtac taaacaagcg gctggaaaac tcgccctggc tgggaggcga gaactacagc
     9661 attgcggata ttgcctgctg gccgtgggtt aatgcctgga ctcgccagcg aattgacctc
     9721 acaatgtatc cggcagtcaa gaactggcat gagcggatcc gttcgcgccc tgccaccggg
     9781 caggcactgc taaaagcaca actcggtgat gagcgttcgg atagttaaca gaaacaggtt
     9841 ctcgtgtatt atttcatcct aagtaaaaca acggagaacc tgcaatggca caacctgccg
     9901 ctattattcg tataaagaac cttcgtttac gtacgtttat cggaattaag gaagaagaaa
     9961 ttaacaaccg tcaggatatt gttatcaatg tgacgatcca ctaccccgcc gataaagcgc
    10021 gcactagcga agatatcaac gatgcgctga attatcgcac cgtaacgaaa aacattattc
    10081 agcatgtaga gaataaccgt ttctctttgt tggaaaaatt aactcaggat gtgctcgata
    10141 tcgcacgtga acatcactgg gtgacgtatg ctgaagtgga gatcgataaa ctgcacgcgc
    10201 tgcgctacgc cgattcggta tccatgacct taagctggca gcgttaaccg ccatatcggg
    10261 aggctgcatg aacatagtga tcaccggagg gacgggatta attggtcgcc atttgattcc
    10321 gcgtttgctg gagctgggcc atcaaatcac ggtagtgacg cgtaacccac agaaagccag
    10381 ttccgttctc ggccctcggg tgacgctatg gcaagggcta gccgatcaaa gcaacctcaa
    10441 cggcgttgat gcggtaatca acctggccgg agaaccgatt gctgataaac gctggactca
    10501 cgagcaaaaa gagcgtctct gccaaagccg ctggaatatc acgcaaaaac tggtcgattt
    10561 gattaatgcc agcgacacgc cgccgtcggt actcatttcc ggctcggcaa cgggctatta
    10621 tggcgactta ggtgaagtgg tggttaccga agaggaaccg ccgcataacg aatttactca
    10681 taaactctgc gcccgctggg aagagattgc ctgccgggcg caaagtgaca aaacgcgagt
    10741 gtgcctgctg cgaaccggcg tggtactggc accggacggc ggtattctcg gtaaaatgct
    10801 gccaccgttt cgtcttggcc tgggcgggcc gattgactct ggtcggcagt atctggcctg
    10861 gattcatatt gatgatatgg tcaacggtat tctctggctg ctggataacg agctgcgcgg
    10921 gccatttaat atggtttcgc cctacccggt acgcaatgaa caatttgccc atgcgctcgg
    10981 tcacgcgctg catcgcccgg ccattttgcg cgtccccgcg accgccattc gactgttaat
    11041 gggcgaatct tcagtactgg tattaggtgg acaacgcgcg ctgcctaaac ggctggaaga
    11101 agcgggtttt gcgtttcgct ggtacgattt agaagaggcg ctggcggatg tcgttcgctg
    11161 atgtggttta cagcaaacat ccgccagtta actcccggtg ttacaggatt agtggctttg
    11221 cgcgataaga tcgtctggtg aaagtcgggt caccatcata actaactctc tgtctaaacc
    11281 tctatccagc atctcctgag caatacgcag ggcttcttcg tgtttgccct gcattgcgcc
    11341 ttcttcacgt aatctgtcag caatggtcat cagtttctcc ttttcttgtg gtgcgcgttc
    11401 cgctatctca ccaataaatg cacgaaaacg ctgggcatcc cctgtttgta atacgtaatt
    11461 aaacagggct tttagctgtc tgtcattagt gttccctgta actagcagcg aaacaatttg
    11521 gtcgactaat cccaacagat cgcgctgacg aatatgtttc tgaattaact ccaacagcgc
    11581 cattttgcgg tgttgcataa tctcgtcatc cggcaccacg gtaatatcca ccaacggaaa
    11641 cgctgatgaa tatattttgc gggctatagc aggctcggca aattcatcaa gccagcagag
    11701 tgaataagga taaggacttc tgcaaccatg ataaaacagc atcgggatca ccaatggaag
    11761 ctctttatag cccg
//
LOCUS       DADMJE010000134        11688 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.135, whole genome shotgun sequence.
ACCESSION   DADMJE010000134 DADMJE010000000
VERSION     DADMJE010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11688)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11688)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11688
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.135"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(67..714)
                     /gene="ychE"
                     /locus_tag="JN001_003161"
     CDS             complement(67..714)
                     /gene="ychE"
                     /locus_tag="JN001_003161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAAT family transporter YchE"
                     /protein_id="HAY9054314.1"
                     /translation="MIQTFFDFPVYFKFFIGLFALVNPVGIIPVFISMTSYQTAAARN
                     KTNLTANLSVAIILWISLFLGDTILQLFGISIDSFRIAGGILVVTIAMSMISGKLGED
                     KQNKQEKSETAVRESIGVVPLALPLMAGPGAISSTIVWGTRYHSISYLFGFFVAIALF
                     ALCCWGLFRMAPWLVRVLRQTGINVITRIMGLLLMALGIEFIVTGIKGIFPGLLN"
     gene            1192..3867
                     /gene="adhE"
                     /locus_tag="JN001_003162"
                     /gene_synonym="adhC"
     CDS             1192..3867
                     /gene="adhE"
                     /locus_tag="JN001_003162"
                     /gene_synonym="adhC"
                     /EC_number="1.1.1.1"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional acetaldehyde-CoA/alcohol
                     dehydrogenase"
                     /protein_id="HAY9054315.1"
                     /translation="MAVTNVAELNALVERVKKAQREYASFTQEQVDKIFRAAALAAAD
                     ARIPLAKMAVAESGMGIVEDKVIKNHFASEYIYNAYKDEKTCGILSEDDTFGTITIAE
                     PIGIICGIVPTTNPTSTAIFKSLISLKTRNAIIFSPHPRAKDATNKAADIVLQAAIAA
                     GAPKDLIGWIDQPSVELSNALMHHPDINLILATGGPGMVKAAYSSGKPAIGVGAGNTP
                     VVIDETADIKRAVASVLMSKTFDNGVICASEQSVVVVDSVYDAVRERFATHGGYLLQG
                     KELKAVQDVILKNGALNAAIVGQPAYKIAELAGFSVPENTKILIGEVTVVDESEPFAH
                     EKLSPTLAMYRAKDFEDAVEKAEKLVAMGGIGHTSCLYTDQDNQPARVSYFGQKMKTA
                     RILINTPASQGGIGDLYNFKLAPSLTLGCGSWGGNSISENVGPKHLINKKTVAKRAEN
                     MLWHKLPKSIYFRRGSLPIALDEVITDGHKRALIVTDRFLFNNGYADQITSVLKAAGV
                     ETEVFFEVEADPTLSIVRKGAELANSFKPDVIIALGGGSPMDAAKIMWVMYEHPETHF
                     EELALRFMDIRKRIYKFPKMGVKAKMIAVTTTSGTGSEVTPFAVVTDDATGQKYPLAD
                     YALTPDMAIVDANLVMDMPKSLCAFGGLDAVTHAMEAYVSVLASEFSDGQALQALKLL
                     KEYLPASYHEGSKNPVARERVHSAATIAGIAFANAFLGVCHSMAHKLGSQFHIPHGLA
                     NALLICNVIRYNANDNPTKQTAFSQYDRPQARRRYAEIADHLGLSAPGDRTAAKIEKL
                     LAWLETLKAELGIPKSIREAGVQEADFLANVDKLSEDAFDDQCTGANPRYPLISELKQ
                     ILLDTYYGRDYVEGETAAKKEAAPAKAEKKAKKSA"
     gene            3991..4887
                     /locus_tag="JN001_003163"
                     /pseudo
     CDS             3991..4887
                     /locus_tag="JN001_003163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904641.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS4 family transposase"
     gene            complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JN001_003164"
     CDS             complement(5169..5786)
                     /gene="tdk"
                     /locus_tag="JN001_003164"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HAY9054316.1"
                     /translation="MAQLYFYYSAMNAGKSTALLQSSYNYQERGMRTVVYTAEIDDRF
                     GAGKVSSRIGLSSPAKLFNQNSSLFDEIRAEHEQQAIHCVLVDECQFLTRQQVYELSE
                     VVDQLDIPVLCYGLRTDFRGELFIGSQYLLAWSDKLVELKTICFCGRKASMVLRLDQA
                     GRPYNEGEQVVIGGNERYVSVCRKHYKEALQVGSLTAIQERHRHD"
     gene            6391..6804
                     /gene="hns"
                     /locus_tag="JN001_003165"
     CDS             6391..6804
                     /gene="hns"
                     /locus_tag="JN001_003165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator H-NS"
                     /protein_id="HAY9054317.1"
                     /translation="MSEALKILNNIRTLRAQARECTLETLEEMLEKLEVVVNERREEE
                     SAAAAEVEERTRKLQQYREMLIADGIDPNELLNSLAAVKSGTKARRAQRPAKYSYVDE
                     NGETKTWTGQGRTPAVIKKAMDEQGKSLDDFLIKQ"
     gene            complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JN001_003166"
     CDS             complement(6948..7856)
                     /gene="galU"
                     /locus_tag="JN001_003166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HAY9054318.1"
                     /translation="MAAINTKVKKAVIPVAGLGTRMLPATKAIPKEMLPLVDKPLIQY
                     VVNECIAAGITEIVLVTHSSKNSIENHFDTSFELEAMLEKRVKRQLLDEVQSICPPHV
                     TIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFD
                     ETGHSQIMVEQVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRY
                     VLSADIWPLLAKTPPGAGDEIQLTDAIDMLIEKETVEAYHMKGKSHDCGNKLGYMQAF
                     VEYGIRHNTLGTEFKAWLEEEMGIKK"
     gene            complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JN001_003167"
     CDS             complement(8058..9071)
                     /gene="rssB"
                     /locus_tag="JN001_003167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator RssB"
                     /protein_id="HAY9054319.1"
                     /translation="MTQPLVGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDAL
                     ELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATENMADIAKALRLGV
                     EDVLLKPVKDLNRLREMVFACLYPSMFNSRVEEEERLFRDWDATVDNPAAAAKLLQEL
                     QPPVQQVISHCRVNYRQLVAADKPGLVLDIAALSENDLAFYCLDVTRAGHNGVLAALL
                     LRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANLPGQFPLLVGYYHRELKNLI
                     LVSAGLNATLNTGEHQVQISNGVPLGTLGNAYLNQLSQRCDAWQCQIWGTGGRLRLML
                     SAE"
     gene            complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JN001_003168"
     CDS             complement(9163..10068)
                     /gene="rssA"
                     /locus_tag="JN001_003168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707140.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase RssA"
                     /protein_id="HAY9054320.1"
                     /translation="MRKIKIGLALGSGAARGWSHIGVINALKKVGIEIDIVAGCSIGS
                     LVGAAYACDRLSALEDWVTSFSYWDVLRLMDLSWQRGGLLRGERVFNQCREIMPETEI
                     ENCSRRFAAVATNLSTGRELWFTEGDLHLAIRASCSIPGLMAPVAHNGYWLVDGAVVN
                     PIPISLTRALGADIVIAVDLQHDAHLMQQDLLSFNVSEENSENGESLPWHARLKERLG
                     SITTRRAVTAPTATEIMTTSIQVLENRLKRNRMAGDPPDILIQPVCPQISTLDFHRAH
                     AAIAAGQLAVERKMDELLPLVRTNI"
     gene            10181..10639
                     /locus_tag="JN001_003169"
     CDS             10181..10639
                     /locus_tag="JN001_003169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YchJ family protein"
                     /protein_id="HAY9054321.1"
                     /translation="MSQLCPCGSAVEYSLCCHPYVSGEKVAPDPEHLMRSRYCAFVMQ
                     DADYLIKTWHPSCGAAALRAELMAGFAHTEWLGLTVFEHCWQDADNIGFVSFVARFTE
                     GGKTGAIIERSRFLKENGQWYYIDGTRPQFGRNDPCPCGSGKKFKKCCGQ"
     gene            10689..11531
                     /gene="purU"
                     /locus_tag="JN001_003170"
     CDS             10689..11531
                     /gene="purU"
                     /locus_tag="JN001_003170"
                     /EC_number="3.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008784958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formyltetrahydrofolate deformylase"
                     /protein_id="HAY9054322.1"
                     /translation="MHSLQRKVLRTICPDQKGLIARITNICYKHELNIVQNNEFVDHR
                     TGRFFMRTELEGIFNDSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLL
                     MKANYGGLDVEIAAVIGNHDTLRSLVERFDIPFELVNHEGLSRNEHDQKMADAIDAYK
                     PDYVVLAKYMRVLTPEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAH
                     YVNDNLDEGPIIMQDVIHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYGNR
                     TIIL"
BASE COUNT         3159 a         2916 c         2650 g         2963 t
ORIGIN      
        1 cgggaacaaa gtaaaaataa tgacgaagta aacggagcat ggcagctccg tttcatttga
       61 aaggaattaa ttaagcaggc cggggaaaat ccccttaata ccagtaacga taaattcaat
      121 ccccaatgcc atcagcaata gccccataat acgcgtaatc acgttgatgc cggtctggcg
      181 taaaacccgt accagccaag gtgccatgcg gaacaatccc cagcaacata aagcgaacaa
      241 tgcaatagcc acaaagaaac caaacagata gctaatgctg tgataacgcg taccccagac
      301 gatggtagaa ctgatcgccc ctggccccgc catcaacggc aacgccaatg gcaccacacc
      361 aatgctttca cgtaccgcgg tttctgattt ttcttgcttg ttctgtttat cctcgccaag
      421 cttgccgctg atcatcgaca tcgctatcgt caccaccagg atgcccccgg cgatacggaa
      481 cgaatcaatt gatataccaa aaagttgcag aatcgtgtcg ccgagaaaaa gcgagatcca
      541 caagataatg gccacagaca ggttggctgt aaggttagtt ttgtttcgcg ctgccgctgt
      601 ctgataactg gtcatgctga taaagacggg aataatccct accgggttga ccagcgcaaa
      661 taacccgatg aaaaatttga agtaaacggg aaaatcaaaa aaggtctgaa tcacggttag
      721 ctccgaagca aaagccggat aatgttagcc ataaataagg ttgaaaagac gcgctgacaa
      781 tacgcctttt gacagcattt ttcacctcct aactacttaa aattgctatc attcgttatt
      841 gttatctagt tgtgcaaaac atgctaatgt agccaccaaa tcatactaca atttattaac
      901 tgttagctat aatggcgaaa agcgatgctg aaaggtgtca gctttgcaaa aaatttgatt
      961 tggatcacgt aatcagtacc cagaagtgag taatcttgct tacgccacct ggaagtgacg
     1021 cattagagat aataactcta atgtttaaac tcttttagta aatcacagtg agtgtgagcg
     1081 cgagtaagct tttgattttc ataggttaag caaatcatca ccgcactgac tatactctcg
     1141 tattcgagca gatgatttac taaaaaagtt taacattatc aggagagcat tatggctgtt
     1201 actaatgtcg ctgaacttaa cgcactcgta gagcgtgtaa agaaagccca gcgtgaatat
     1261 gccagtttca ctcaagagca agtagacaaa atcttccgcg ccgccgctct ggctgctgca
     1321 gatgctcgaa tcccactcgc gaaaatggcc gttgccgaat ccggcatggg tatcgtcgaa
     1381 gataaagtga tcaaaaacca ctttgcttct gaatatatct acaacgccta taaagatgaa
     1441 aaaacctgtg gtattctgtc tgaagacgac acttttggta ccatcactat cgctgaacca
     1501 atcggtatta tttgcggtat cgttccgacc actaacccga cttcaactgc tatcttcaaa
     1561 tcgctgatca gtctgaagac ccgtaacgcc attatcttct ccccgcaccc gcgtgcaaaa
     1621 gatgccacca acaaagcggc tgatatcgtt ctgcaggctg ctatcgctgc cggtgctccg
     1681 aaagatctga tcggctggat cgatcaacct tctgttgaac tgtctaacgc actgatgcac
     1741 cacccagaca tcaacctgat cctcgcgact ggtggtccgg gcatggttaa agccgcatac
     1801 agctccggta aaccagctat cggtgtaggc gcgggcaaca ctccagttgt tatcgatgaa
     1861 actgctgata tcaaacgtgc agttgcatct gtactgatgt ccaaaacctt cgacaacggc
     1921 gtaatctgtg cttctgaaca gtctgttgtt gttgttgact ctgtttatga cgctgtacgt
     1981 gaacgttttg caacccacgg cggctatctg ttgcagggta aagagctgaa agctgttcag
     2041 gatgttatcc tgaaaaacgg tgcgctgaac gcggctatcg ttggtcagcc agcctataaa
     2101 attgctgaac tggcaggctt ctctgtacca gaaaacacca agattctgat cggtgaagtg
     2161 accgttgttg atgaaagcga accgttcgca catgaaaaac tgtccccgac tctggcaatg
     2221 taccgcgcta aagatttcga agacgcggta gaaaaagcag agaaactggt tgctatgggc
     2281 ggtatcggtc atacctcttg cctgtacact gaccaggata accaaccggc tcgcgtttct
     2341 tacttcggtc agaaaatgaa aacggctcgt atcctgatta acaccccagc gtctcagggt
     2401 ggtatcggtg acctgtataa cttcaaactc gcaccttccc tgactctggg ttgtggttct
     2461 tggggtggta actccatctc tgaaaacgtt ggtccgaaac acctgatcaa caagaaaacc
     2521 gttgctaagc gagctgaaaa catgttgtgg cacaaacttc cgaaatctat ctacttccgc
     2581 cgtggctccc tgccaatcgc gctggatgaa gtgattactg atggccacaa acgtgcgctc
     2641 atcgtgactg accgcttcct gttcaacaat ggttatgctg atcagatcac ttccgtactg
     2701 aaagcagcag gcgttgaaac tgaagtcttc ttcgaagtag aagcggaccc gaccctgagc
     2761 atcgttcgta aaggtgcaga actggcaaac tccttcaaac cagacgtgat tatcgcgctg
     2821 ggtggtggtt ccccgatgga cgccgcgaag atcatgtggg ttatgtacga acatccggaa
     2881 actcacttcg aagagctggc gctgcgcttt atggatatcc gtaaacgtat ctacaagttc
     2941 ccgaaaatgg gcgtgaaagc gaaaatgatc gctgtcacca ccacttctgg tacaggttct
     3001 gaagtcactc cgtttgcggt tgtaactgac gacgctactg gtcagaaata tccgctggca
     3061 gactatgcgc tgactccgga tatggcgatt gtcgacgcca acctggttat ggacatgccg
     3121 aagtccctgt gtgctttcgg tggtctggac gcagtaactc acgccatgga agcttatgtt
     3181 tctgtactgg catctgagtt ctctgatggt caggctctgc aggcactgaa actgctgaaa
     3241 gaatatctgc cagcgtccta ccacgaaggg tctaaaaatc cggtagcgcg tgaacgtgtt
     3301 cacagtgcag cgactatcgc gggtatcgcg tttgcgaacg ccttcctggg tgtatgtcac
     3361 tcaatggcgc acaaactggg ttcccagttc catattccgc acggtctggc aaacgccctg
     3421 ctgatttgta acgttattcg ctacaacgcg aacgacaacc cgaccaagca gactgcattc
     3481 agccagtatg accgtccgca ggctcgccgt cgttatgctg aaattgctga ccacctgggt
     3541 ctgagcgcac cgggcgaccg tactgctgct aagatcgaga aactgctggc atggctggaa
     3601 acgctgaaag ctgaactggg tattccgaaa tctatccgtg aagctggcgt tcaggaagca
     3661 gacttcctgg cgaacgtgga taaactgtct gaagatgcat tcgatgacca gtgcaccggc
     3721 gctaacccgc gttacccgct gatctccgag ctgaaacaga ttctgctgga tacctactac
     3781 ggtcgtgatt atgtagaagg tgaaactgca gcgaagaaag aagctgctcc ggctaaagct
     3841 gagaaaaaag cgaaaaaatc cgcttaatca gtagcgctgt ctggcaacat aaacggcccc
     3901 ttctgggcaa tgccgatcag ttaaggatta gttgaccgat ccttaaactg aggcactata
     3961 acggcttcca caacagggag ccgttttctt atgccacttc tcaatgatct gctcgatttc
     4021 agtgaccatc cgcttatgcc tccgccctct gcacaactat ttgcagaaca ccttcccacc
     4081 gagtggatac aacactgcct gacgctttct gctcatgcga ccgttcgccg ccgtcgttta
     4141 ccgggggaca tggttatctg gatggtggtg caatgagcca attaccgatg ttgttcgccg
     4201 tctgaacctg agcgcggatg gcgaagcggg gatgaacctg ctggcccgca gcgctgtcac
     4261 ccaagcgcgt cagcgcgtgg gggccgcccc agtggaatgg ctcttccgcc agaccgcaca
     4321 gacaggggcg cggaacgtta cctgaaggat gactggcacg gcctgcaact ttttgccatt
     4381 gatggcgcac agttcaggac acctgataaa cccgagctgc gtgaatatta tgggtctgcc
     4441 aacacatcca ctaagcggca gaacgcctac ccggttatgc gtctggtggc cttaatgaac
     4501 ctgggaagtc acattctgct gaatgccgtg accgcacctt accggcagag cgaaactgtg
     4561 ctggcccact ccatgctcgc caccatcccg gataactcta ttacgttgtt tgataagctt
     4621 ttttacagcg aagacctgct gctaacgctg aaccagaagg gttgtaaccg ccactggcta
     4681 ctgcctgcgt ggaagaatat cgcatcagaa atgatagagc tgggaaacac ggcgtcacca
     4741 gggaccatcc cgaaacgact ggagcatctt cggggtgctc tggaagtggt gttcataaca
     4801 aaacgccccc gaccatcaag gccgaggtcg gttaagatat caaaaacccg ttatcctgtg
     4861 aaacatagtg ccgctcctct taagtgaacg gcattgccct tctggggccg tattttttgt
     4921 ttacccaaag caacttttcc ataaaccgac agcattagcc ttcatcatat ttgcgacgat
     4981 gtataacgcc taaacacagg gatattgtac tttacaggtc acaagtcaac gtcggtgctt
     5041 aagagccctg tgaggcgtat agcggcgtta aaaaactgcc gagaagggta tatagcccgg
     5101 aagaagtgcg taaaacgaac tgacaggata aaagtgccct gctcaccctg tcagtaaaga
     5161 aattcttatt aatcgtggcg atgcctttcc tgaatagccg ttaatgagcc gacttgtaac
     5221 gcctctttat agtgtttacg gcatacagaa acgtatcgtt cattaccacc aattaccacc
     5281 tgctcacctt cgttataagg tctgcctgct tgatcaagac gcagcaccat gcttgcttta
     5341 cggccacaaa aacagatggt ttttaattca accagtttgt cggaccatgc cagtaagtat
     5401 tggctgccaa taaataattc acctcgaaaa tcggtacgta aaccataaca aagtacgggt
     5461 atatcgagtt gatcgacaac ctccgataat tcatatactt gttgtctggt taaaaactgg
     5521 cattcatcaa ccagtacgca atgaattgcc tgctgttcat gttccgcacg aatctcatca
     5581 aataatgatg aattttggtt aaataatttt gcaggcgatg acaaacctat acgcgaactg
     5641 actttcccgg caccaaagcg atcatcaatt tctgccgtat atacgacagt gcgcatgccg
     5701 cgttcttggt aattgtatga agattgcaac aatgctgtag acttacccgc attcattgcg
     5761 gaatagtaga aatatagctg tgccatcagc cacaggccct caatgatatg aaataaagtt
     5821 ggctggagtt tatcataatt cgtcagtttt tcagctcaac agtatgcaca gaagtgggta
     5881 tatgcgttct cccttacgaa gccttgcata atccttctga gctatcatta caactgcctc
     5941 gcttgttata agcgggtaaa tgactgctgg taactattca caatctttaa cctgttgcgc
     6001 aagtaatagc cctctgttga cctccaggag atagtgcaat actaagtcca tgctcttatt
     6061 gcgactgttc tacttttcat cattcgctta atagggaatt ctcgtaaaca caactaatac
     6121 agaagactga aaggccgtca gcctacgata atctccccat aaaatgtgac atgaatcagg
     6181 aagttttaac ctcacgtgct gcgaaatcat cggtgtaaat agggctatat gccgcgtctt
     6241 ttctggctaa ttttatgaaa agatatttat tggcggcaca aaataaagaa caattttgaa
     6301 ttccttacat tcctggctat tgcacaactg aatttaaggc tctattatta cctcaacaaa
     6361 ccaccccaat ataagtttga gattactaca atgagcgaag cacttaaaat tctgaacaac
     6421 atccgtactc ttcgtgcgca ggcaagagaa tgtacacttg aaacgctgga agaaatgctg
     6481 gaaaaattag aagttgttgt taacgaacgt cgcgaagaag aaagcgcggc tgctgctgaa
     6541 gttgaagagc gcactcgtaa actgcagcaa tatcgcgaaa tgctgatcgc tgacggtatt
     6601 gacccgaacg aactgctgaa tagccttgct gccgttaaat ccggcaccaa agctagacgt
     6661 gctcagcgtc cggcaaaata tagctatgtt gacgaaaacg gcgaaactaa aacctggact
     6721 ggccagggcc gtactccagc tgtaatcaaa aaagcaatgg atgagcaagg taaatccctc
     6781 gacgatttcc tgatcaagca ataatctttt gtagattgca attgctaaaa atcccgccat
     6841 cggcgggatt ttttattgtc cggtttaaga caatttaata agaataagct ataaaaaaac
     6901 ggcgtcgatt gttcaacgcc gtttcgtgga taacaccgat atggatgtta cttcttaatg
     6961 cccatctctt cttcaagcca ggctttaaat tccgtgccaa gggtgttatg acgaataccg
     7021 tattcaacga aggcctgcat gtaacctaat ttattaccgc agtcatggct cttccctttc
     7081 atatgatagg cttccaccgt ttctttttcg atcagcatat caattgcgtc ggtgagctga
     7141 atttcatcac cagctcccgg aggggttttt gccagcaacg gccaaatatc cgcgctaagt
     7201 acgtaacgac ccacaatagc gagattagac ggcgcaacat ccgctttcgg tttttctacc
     7261 acaccaacca tcggtacact ttcacccggc gctaattcaa cgcctttgca atccacaacg
     7321 ccatatgcgg tcacatcagc aacctgttca accatgatct ggctatgacc cgtttcatca
     7381 aagcggcgga tcatctctgc caggttatcc tgtgacaaat cggattcata ttcatccaga
     7441 ataacatcag gcaaaataac agctaccggt tcatcaccca ctaccgggtg agcacacaat
     7501 accgcgtgtc ccaggccttt cgccagcccc tgacgaactt gcataatagt cacgtgcggc
     7561 ggacaaatag actgcacttc atcaagcagt tgacgtttta cacgtttttc cagcattgct
     7621 tccagttcaa aactggtatc aaagtggttt tcaatcgagt ttttagatga gtgcgtaacc
     7681 agcacaattt cagtaatgcc agccgcaata cattcattca cgacgtattg aattaatggc
     7741 ttatcgacaa gtggcagcat ctctttcggg atggctttcg tcgccggcaa catcctggtt
     7801 cctaatcccg caacggggat aacggctttt ttgactttcg tattaatggc agccatttaa
     7861 attctcctgg actgttcgtg ttttgaacgt gttcatattt ctgtatcgca tcccagtata
     7921 tcagcacccc gaaggggcta agttctgaaa aggaggcgag ttagcataat taagacaatt
     7981 acttatacga atggcgacga tagtaccacc agccgacatt agcaggtaat gcaaatttag
     8041 tccgcgttat cgtttgctca ttctgcagac aacatcaagc gcagtcgacc accggttccc
     8101 catatttggc attgccaggc atcgcatcgc tggctcaatt gattcaaata agcgttacct
     8161 aaagtgccta acggaacacc attactgatt tgcacctggt gttcgccggt atttaacgtc
     8221 gcattcagac ccgcagaaac cagaatgaga tttttcagtt cgcgatgata atagccaact
     8281 aatagcggaa actgccccgg cagattggcc tgacggagta aatggtttac ctgcttcaat
     8341 aacgcgccca gctctggcaa ccgttgattt tggtgtgcaa gctgttcctg taataatccg
     8401 ttaaacaatg cgcgtaataa caaggcagca agtacgccat tatgtccagc tcgggtgaca
     8461 tcaaggcaat aaaatgccag atcgttttcc gaaagtgcgg caatatcaag caccaggccg
     8521 ggtttgtccg cggcaaccaa ttgacgataa ttaacccggc aatgggaaat cacctgctga
     8581 accggcggtt gtagttcctg taataatttc gccgctgcgg cagggttatc aaccgttgca
     8641 tcccaatcgc gaaaaagcct ttcctcttcc tcaacgcgcg aattaaacat gctgggatag
     8701 agacaggcaa aaaccatctc gcgcaagcga ttcagatctt taactggttt cagcaaaaca
     8761 tcttcaacgc ccagacgtaa cgctttggca atatctgcca tattttcagt ggcagatatc
     8821 accagaactg gggtctggtc gcctctgtta cgtatatgct ccagcagttt aagcccgttc
     8881 attcgtggca tcgcgatatc acatatcatc aggtctggag tgaaacctcc cagcaactca
     8941 agggcatcca ccccatcagc cgccagtacc gttgtcgctc ccaatgagga aaaccatgaa
     9001 tccagaagcg agcgaaatac ctgctcatct tcaacaatga gaatctgttt tccgaccaat
     9061 ggctgcgtca tgttctctcc cctgactggc tttactcaat agtggcatgc tattgccacc
     9121 tgcgcctgtc agaattaact taagtgtaga taaaaattct ggtcaaatgt tggtgcgtac
     9181 caacggcaaa agttcgtcca ttttcctttc cactgccagc tgtccggccg caatggcagc
     9241 gtgcgcgcga tggaaatcaa gcgtagatat ttgcgggcaa acaggttgaa tcagaatatc
     9301 gggcggatca cctgccatgc ggttcctttt aaggcggttc tccagcacct ggatagaagt
     9361 ggtcataatc tctgttgccg ttggcgctgt caccgcccga cgtgttgtta tactgcctaa
     9421 cctttctttc agacgcgcat gccacggcaa agattcacca ttctcgctat tttcttcact
     9481 gacattaaag gagagcaaat cttgttgcat caaatgagca tcgtgctgca ggtcgaccgc
     9541 tatcacaata tcagccccca atgcacgcgt gagggaaata ggaattgggt taactactgc
     9601 tccatcaacc agccagtagc cgttatgtgc aacaggtgcc atgagtcctg gaatactgca
     9661 tgatgcgcga atagcaagat ggagatcgcc ttcagtaaac cataattcac gtcccgtact
     9721 taaattggtg gcaacagccg caaagcgacg ggaacaattt tcgatctctg tttccggcat
     9781 tatttcgcgg cattgattga agacacgctc gccgcgcagt aacccaccgc gctgccagga
     9841 gagatccatc aggcgtaaaa catcccaata actgaaagag gtcacccaat cttccagcgc
     9901 agataatcga tcgcatgcat aggcagcgcc caccagcgaa ccaattgaac atcctgcaac
     9961 gatatcaatt tcaataccca ctttttttag cgcattaata acgccaatat gcgaccaacc
    10021 tctcgccgcg ccagatccca gcgccagccc tatttttatc tttctcatta ttcccgcaag
    10081 attcccctgg aatgcaatcg tagccacatc gctactgctc ggttaacata gtgctactca
    10141 ggcggttaat acgccgttat tgtttccagg gagattattt gtgtctcagc tttgtccctg
    10201 tggtagtgct gtcgagtata gcctatgttg ccacccttat gtgtctggtg aaaaggttgc
    10261 acctgatcca gaacatctca tgcgttcgcg ttactgcgct tttgtgatgc aagacgcaga
    10321 ttatttaata aagacctggc atccctcttg tggagcagcg gcgttacgtg ccgaattgat
    10381 ggccggattt gcgcatactg aatggttggg attgaccgta tttgaacatt gttggcagga
    10441 cgccgacaat atcggatttg tcagttttgt tgctcgattt accgaaggtg gcaaaacagg
    10501 tgcaataatt gaacgttcgc gatttttgaa agaaaacggt caatggtact atattgacgg
    10561 tacacgtccg cagtttggtc gcaacgatcc ctgcccttgt ggttcaggta aaaaatttaa
    10621 aaagtgctgc ggccaataat ggttgacggt acggtttagc aaacactctc aacaaggttt
    10681 ttccagcaat gcattcactc caacgtaaag ttctgcgtac tatttgtccg gaccaaaaag
    10741 gtctgatcgc acgtattacc aatatttgct acaagcacga gttaaatatc gtacagaaca
    10801 atgaatttgt tgatcaccgt accgggcgct tttttatgcg cacggaactg gaagggattt
    10861 ttaatgattc caccctgctg gcggatctcg atagcgcatt gccagaaggc tccgtgcgtg
    10921 agctgaatcc tgccggtcgt cgccggatag tgattctggt cactaaagaa gcgcattgcc
    10981 ttggcgattt gttgatgaaa gccaattacg gcggcctgga tgtcgaaatc gcggcagtta
    11041 ttggtaacca cgatacttta cgttctctgg ttgagcgttt tgatattccg tttgagctgg
    11101 taaaccatga agggttaagc cgcaacgagc acgatcaaaa gatggcagac gccattgatg
    11161 cttataaacc tgactatgtg gtgctggcga agtatatgcg ggtattaacg ccggaatttg
    11221 tggcacgctt cccgaataaa atcatcaata ttcaccattc attcctgcct gcgtttatcg
    11281 gcgcacgtcc ttatcaccag gcctatgaac gtggtgtgaa gattattggc gcaaccgctc
    11341 actatgtgaa tgacaatctg gacgaaggcc caatcatcat gcaggacgtt attcatgtcg
    11401 atcataccta cacagctgaa gatatgatgc gcgcaggtcg tgacgtcgag aaaaacgtct
    11461 taagtcgtgc gctatacaaa gtactggcac agcgcgtctt tgtttacggt aatcggacga
    11521 ttattcttta atcgccagca aaaataactg gttaccttta atccgttacg gatgaaaatt
    11581 acgcaaccag ttcatttttc tcaacgtaac actttacagc ggcgcgtcat ttgatatgat
    11641 gcgccccgct tcccgataag ggagcaggcc agtaaaaagc attacccc
//
LOCUS       DADMJE010000135        11627 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.136, whole genome shotgun sequence.
ACCESSION   DADMJE010000135 DADMJE010000000
VERSION     DADMJE010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11627)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11627)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11627
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.136"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(50..1036)
                     /locus_tag="JN001_003171"
                     /pseudo
     CDS             complement(50..1036)
                     /locus_tag="JN001_003171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310582.1"
                     /note="PtrB; oligopeptidase that cleaves peptide bonds
                     following arginine and lysine residues; incomplete;
                     partial in the middle of a contig; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oligopeptidase B"
     gene            complement(1245..1904)
                     /locus_tag="JN001_003172"
     CDS             complement(1245..1904)
                     /locus_tag="JN001_003172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance TerB family protein"
                     /protein_id="HAY9054323.1"
                     /translation="MANWLNQLQSLLGQSSSSISSSADQGLGKLLVPGALGGLAGLLV
                     ANKSARKLLTKYGTNALLVGGGAVAGTVLWNKYKDKIRAAHQDEPQFGAQSTPLDERT
                     ERLILALVFAAKSDGHIDAKERAAIDQQLREAGVEEQGRVLIEQAIEQPLDPQRLATG
                     VRNEEEALEIYFLSCAAIDIDHFMERSYLNALGDALKIPQDVRDGIERDLEQQKRTLA
                     E"
     gene            complement(2231..2587)
                     /gene="yebF"
                     /locus_tag="JN001_003173"
     CDS             complement(2231..2587)
                     /gene="yebF"
                     /locus_tag="JN001_003173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310584.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YebF"
                     /protein_id="HAY9054324.1"
                     /translation="MKKRGAFLGLLLVSACASVFAANNETSKSVTFPKCEGLDAAGIA
                     ASVKRDYQQNRVARWADDQKIVGQADPVAWVSLQDIQGKDDKWSVPLTVRGKSADIHY
                     QVSVDCKAGMAEYQRR"
     gene            complement(2654..2948)
                     /gene="yebG"
                     /locus_tag="JN001_003174"
                     /pseudo
     CDS             complement(2654..2948)
                     /gene="yebG"
                     /locus_tag="JN001_003174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310585.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein YebG"
     gene            3082..4260
                     /gene="purT"
                     /locus_tag="JN001_003175"
     CDS             3082..4260
                     /gene="purT"
                     /locus_tag="JN001_003175"
                     /EC_number="2.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate-dependent phosphoribosylglycinamide
                     formyltransferase"
                     /protein_id="HAY9054325.1"
                     /translation="MTLLGTALRPAATRVMLLGSGELGKEVAIECQRLGVEVIAVDRY
                     ADAPAMHVAHRSHVINMLDGDALRRVVELEKPHYIVPEIEAIATDMLIQLEEERLNVV
                     PCARATKLTMNREGIRRLAAEELQLPTSTYRFADSESLFREAVADIGYPCIVKPVMSS
                     SGKGQTFIRSAEQLAQAWKYAQQGGRAGAGRVIVEGVVKFDFEITLLTVSAVDGVHFC
                     APVGHRQEDGDYRESWQPQQMSPLALERAQEIARKVVLALGGYGLFGVELFVCSDEVI
                     FSEVSPRPHDTGMVTLISQDLSEFALHVRAFLGLPVGGIRQYGPAASAVILPQLTSQN
                     VTFDNVQNAVGADLQIRLFGKPEIDGSRRLGVALATAESVVDAIERAKHAAGQVKVQG
                     "
     gene            complement(4316..4957)
                     /locus_tag="JN001_003176"
     CDS             complement(4316..4957)
                     /locus_tag="JN001_003176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 4-hydroxy-2-oxoglutarate
                     aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase"
                     /protein_id="HAY9054326.1"
                     /translation="MKNWKTSAESILTTGPVVPVIVVKKLEHAVPMAKALVAGGVRVL
                     EVTLRTECAVDAIRAIAKEVPEAIVGAGTVLNPQQLAEVTEAGAQFAISPGLTEPLLK
                     AATEGTIPLIPGISTVSELMLGMDYGLKEFKFFPAEANGGVKALQAIAGPFSQVRFCP
                     TGGISPANYRDYLALKSVLCIGGSWLVPADALEAGDYDRITKLAREAVEGAKL"
     gene            complement(4994..6805)
                     /gene="edd"
                     /locus_tag="JN001_003177"
     CDS             complement(4994..6805)
                     /gene="edd"
                     /locus_tag="JN001_003177"
                     /EC_number="4.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020244583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphogluconate dehydratase"
                     /protein_id="HAY9054327.1"
                     /translation="MNPQLLRVTNRIIERSRETRSAYLARIEQAKTSTVHRSQLACGN
                     LAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPEIIRKALHEANAVG
                     QVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPG
                     LTMAALSFGHLPAVFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAP
                     GTCTFYGTANTNQMVVEFMGMQSPGSSFVHPDSPLRDALTAAAARQVTRMTGNGNEWM
                     PIGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGIQINWDDFSDLSDVVPLMA
                     RLYPNGPADINHFQAAGGVPVLVRELLKAGLLHEDVNTVAGFGLSRYTLEPWLNNGEL
                     DWREGAEKSLDSNVIASFEQPFSHHGGTKVLSGNLGRAVMKTSAVPVENQVIEAPAVV
                     FESQHDVMPAFEAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRCFKIALVT
                     DGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARE
                     PHIPDLSASRVGTGRELFSALREKLSGAEQGATCITF"
     gene            complement(7040..8515)
                     /gene="zwf"
                     /locus_tag="JN001_003178"
     CDS             complement(7040..8515)
                     /gene="zwf"
                     /locus_tag="JN001_003178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HAY9054328.1"
                     /translation="MAVTQTAQACDLVIFGAKGDLARRKLLPSLYQLEKAGQLNPDTR
                     IIGVGRADWDKAAYTKVVREALETFMKETIDEGLWDTLSARLDFCNLDVNDTAAFNRL
                     GAMLDQKNRITINYFAMPPSTFGAICKGLGEAKLNAKPARVVMEKPLGTSLATSQEIN
                     DQVGEYFEECQVYRIDHYLGKETVLNLLALRFANSLFVNNWDNRTIDHVEITVAEEVG
                     IEGRWGYFDKAGQMRDMIQNHLLQILCMIAMSPPSDLSADSIRDEKVKVLKSLRRIDR
                     SNVREKTVRGQYTAGFAQGKKVPGYLEEEGANKSSNTETFVAIRVDIDNWRWAGVPFY
                     LRTGKRLPTKCSEVVVYFKTPELNLFKESWQDLPQNKLTIRLQPDEGVDIQVLNKVPG
                     LDHKHNLQITKLDLSYSETFNQTHLADAYERLLLETMRGIQALFVRRDEVEEAWKWVD
                     SITEAWAMDNDAPKPYQAGTWGPVASVAMITRDGRSWNEFE"
     gene            8853..9722
                     /locus_tag="JN001_003179"
     CDS             8853..9722
                     /locus_tag="JN001_003179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HAY9054329.1"
                     /translation="MNMLEKIQSQLEHLSKSERKVAEVILASPDNAIHSSIAAMALEA
                     NVSEPTVNRFCRSMDTRGFPDFKLHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESA
                     MATLDHVRHSLDKSAINRAVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS
                     DDIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTSAGTPLARE
                     ATLAITLDVPEDTDIYMPMVSRLAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKES
                     RFDKQLLNLSDDR"
     gene            9850..11292
                     /gene="pyk"
                     /locus_tag="JN001_003180"
     CDS             9850..11292
                     /gene="pyk"
                     /locus_tag="JN001_003180"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HAY9054330.1"
                     /translation="MSRRLRRTKIVTTLGPATDRDNNLEKVIAAGANVVRMNFSHGSP
                     EDHKMRADKVREIAAKLGRHVAILGDLQGPKIRVSTFKEGKVFLNIGDKFLLDANLGK
                     GEGDKEKVGIDYKGLPADVVPGDILLLDDGRVQLKVLEVQGMKVFTEVTVGGPLSNNK
                     GINKLGGGLSAEALTEKDKADIKTAALIGVDYLAVSFPRCGEDLNYARRLARDAGCDA
                     KIVAKVERAEAVCSQDAMDDIILASNVVMVARGDLGVEIGDPELVGIQKALIRRARQL
                     NRAVITATQMMESMITNPMPTRAEVMDVANAVLDGTDAVMLSAETAAGQYPSETVAAM
                     ARVCLGAEKIPSINVSKHRLDVQFDNVEEAIAMSAMYAANHLKGVTAIITMTESGRTA
                     LMTSRISSGLPIFAMSRHERTLNLTALYRGVTPVHFDSANDGVAAASEAVNLLRDKGY
                     LMSGDLVIVTQGDVMSTVGSTNTTRILTVE"
     gene            complement(11352..11570)
                     /locus_tag="JN001_003181"
     CDS             complement(11352..11570)
                     /locus_tag="JN001_003181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001499009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054331.1"
                     /translation="MEYQADYYITINDSIKTWVQTQYSKDSGLPMAVIGHSVAEEAGM
                     RRLASYLDLHSGYPCIHFTGGCDYDWIE"
BASE COUNT         2824 a         2993 c         2899 g         2911 t
ORIGIN      
        1 ctgctcaaaa aagaacaaat ggtagtgtcc gctattgcca gtacacctca accagccagt
       61 cggtaaacag cgtaaaccct tccagcatga tgttttcgcg tggcggaatt aactcttccc
      121 actgttgctc atcacgcagg cgggtacggt ataagccaaa gtttttgccg tggcggttgg
      181 aacgcagata aaaccgatgc tggtagtgat caaggctgta ttcgtgatct ttgcggcgcg
      241 gcagaaaaac aaacggctcg gcatcggcca tttccgcgtc cagcaggcga acttcactgg
      301 tggtggcgct ggccaaatga atgactacat agtgcttcga ggtcgtttta tgcaggctga
      361 cgtaataggt atcgtctttt tcttcgtaga tcagtttatc ttgcgatgct ggcgtaccga
      421 tggcgtgacg ccagacctga taaggcagca gcgtcaccgg atgcttgcga acatagtaga
      481 aagtccagga gtcatttgcc cagacaaagc tgggttcaac gttatccagc agttccgggt
      541 accagttacc agtttccaga ttacgaaaac gaatgccgta ctggcgtcgg gaaagaaaat
      601 cttctgccag cgccataatg gtgttatcgg gcgtaatcgc cattccgccc atcgaataaa
      661 actcactatg agctgcgcgc ttattggcat cgagcaatgt ttcccactca tcccactctt
      721 cactgaatgc cgattgacgc tggtagatag catattcaca gcctggttca taaatatgcc
      781 gatagcggta gccatttttg atgtagggcg cagaaacttc tcgttgcgga atgcggtcga
      841 tgatttcttt taagatgcga tcctgcaagg cttgttgtga ggccatcacc cgatgaccgt
      901 aactattttc ttgttgcagg tagtccagga cttctggctg agaacgcgta tcgtcccgca
      961 gccagtagta attatcgatg cgcgtatcgc catgaagcgt catggcgtgg ggaatgcggg
     1021 cggcttttgg tagcatgtta ttgttctttc tggttgaaac atcttataag ggtggcaaaa
     1081 ctcaccgggg atgcaagcga aacaggggag tcattgctta gatgatgaca ggtaatggcg
     1141 cggatatcga atgttatgca gacagagaaa atcagcctgt tcaaatggct gtgcgattct
     1201 ggatagcccg aaatagtcaa cttcaggcta tccagagagc ggaattattc cgccaaagtg
     1261 cgtttttgct gttcgagatc gcgttcaatg ccgtcacgaa catcctgggg gattttcagc
     1321 gcgtcaccca gtgcattcag gtaactgcgt tccataaaat ggtcaatatc aatagccgcg
     1381 caactcagga aatagatttc cagcgcctct tcttcattgc ggaccccggt agccaagcgt
     1441 tgtggatcca gcggttgttc gattgcctgc tcaatgagta cacgcccctg ctcttccacg
     1501 ccggcttcac gcaattgctg gtcgattgcc gcacgttctt tggcatcaat atgaccatca
     1561 cttttagcgg caaagaccag cgcaaggatc aaacgttctg tacgctcatc cagcggcgta
     1621 ctttgcgcgc caaactgcgg ttcgtcctga tgcgccgcgc gaattttatc tttgtattta
     1681 ttccacagca ccgtacccgc taccgctccg ccgccaacca gtaacgcgtt ggtgccatat
     1741 ttcgtaagaa gtttacgtgc tgatttattt gcgaccagca gcccagccag tccgcctaat
     1801 gcgcctggca ctaacagttt gcccaatccc tgatccgcag acgaggagat agaagaactg
     1861 ctttgcccaa gcagggattg cagttgattt aaccagttag ccatatttgc tcctcaataa
     1921 ccatttttag tgcctgtagc atagcggatg aggatgtcag aaaatgtata tcgagacaaa
     1981 agatgcgcaa ataagcgggg cggtaggccg ttattcaaag aaattcgcgc caggtaaggt
     2041 atttactgta tatcaggtga taagggtatt ttaggtgaaa gtagtttgtc gttttgagtg
     2101 gcattgtttg atgctgattg cccgatgcga cgctgttgcg tcttctcagg cctacgattg
     2161 tggtgcgttc tggggcggac aaggcactcg cgccgcatcc gccaacggtc aatcgaatta
     2221 tcagaagcca ttaacgccgc tgatattccg ccattcccgc tttgcagtcc acgctgacct
     2281 ggtaatgaat atcggcactt ttaccacgca cggttagcgg tactgaccat ttatcatctt
     2341 taccctgaat gtcctgcaaa ctgacccaag ccacgggatc ggcctgaccg acaatttttt
     2401 gatcatctgc ccaacgcgcc acgcgatttt gttgataatc acgttttacg ctcgcggcaa
     2461 ttccggcagc atccagacct tcacactttg ggaaagtgac cgacttgctg gtttcattat
     2521 tggcagcgaa aactgatgcg caggcagaaa ccaacaacag ccctaaaaac gcccctcttt
     2581 ttttcatgtt tttctccata gcacaatgat tcaggagaaa gcatggtaca aattgtcagg
     2641 agcgcaagtt gcttcaggcc gcgtgtgagg catcttcctc ttcggattca gcaccgacga
     2701 cctgtgggtg gggacggtaa tttgccggtt ttcagaatgg tgctcagcac atctttttgt
     2761 tctgccagcc atagcgaaag ggcttcacgt tgctcgtctt ccatttgcac tggagaatta
     2821 gtcagccagg tgtcaagcag atccgccgta tcaagcattt tgtcataagc atcggcttcc
     2881 tttttgctgg taaacgacat tttctcttcg ccctcacgaa tgactacgta tttaacttca
     2941 accgccattt gcagcctctc ataataactg tgattttata cagtatattt cttttcggtt
     3001 gagaaatcaa aatcaacaat aaagacacac gcaaacgttt tcgtttatac tgcgcgcgga
     3061 attaatcagg ggatattcgt tatgacgtta ttaggcactg cgctgcgtcc ggcagcaact
     3121 cgcgtgatgt tattaggctc cggtgaactg ggtaaagaag tggcaatcga gtgtcagcgt
     3181 ctcggcgtag aggtgattgc cgtcgatcgc tatgccgacg caccagccat gcatgtcgcg
     3241 catcgctccc atgtcattaa tatgcttgat ggtgatgcat tacgccgtgt ggttgaactg
     3301 gaaaaaccac attatatcgt gccggagatc gaagctattg ccaccgatat gctgatccaa
     3361 cttgaagagg aaagactgaa tgttgtcccc tgcgctcgcg caacgaaatt aacgatgaat
     3421 cgcgagggta tccgtcgcct agcggcagaa gagctgcagc tgcccacttc cacttatcgt
     3481 tttgccgata gcgaaagcct tttccgcgag gcggttgctg acattggcta tccctgcatt
     3541 gtaaaaccgg tgatgagctc ttccggcaag gggcagacgt ttattcgttc tgcagagcaa
     3601 cttgctcagg catggaagta cgctcagcaa ggcggtcgcg ccggagcggg ccgcgtaatt
     3661 gttgaaggcg tcgttaagtt tgacttcgaa attaccttgc taaccgtcag cgcggtggat
     3721 ggcgtccatt tctgtgcacc ggtaggtcat cgccaggaag atggcgacta ccgtgaatcc
     3781 tggcaaccac agcaaatgag cccgcttgcc cttgaacgtg cgcaggagat tgcccgtaaa
     3841 gtggtgctgg cactgggcgg ttatggtctg tttggtgtcg agctgtttgt ctgtagtgat
     3901 gaggtgattt tcagtgaggt ctcccctcgt ccacatgata ccgggatggt gacgttaatt
     3961 tctcaagatc tttcagagtt tgccctgcat gtacgtgcct tcctcggact tccggttggc
     4021 gggatccgtc agtatggtcc tgcagcttct gccgttattc tgccacaact gaccagtcag
     4081 aatgtcacgt ttgataatgt gcagaatgcc gtaggcgcag atttgcagat tcgtttattt
     4141 ggtaagccgg aaattgatgg cagccgtcgt ctgggtgttg cgctggcgac cgctgagagt
     4201 gttgttgacg ccattgaacg cgcgaagcac gccgccggac aggtaaaagt acagggttaa
     4261 acccggcaaa aaaacgctac aaaaatgccc gatcgtagat cgggcgtttt gacttttaca
     4321 gcttagcgcc ttctacagct tcacgcgcca gcttagtaat gcggtcgtaa tcgcccgctt
     4381 ccagcgcatc tgccggaacc agccaggaac caccgatgca cagcacgctt ttcagcgcca
     4441 ggtagtcacg gtagttagcc ggagaaatac cacccgtcgg gcagaaacgg acctgggaga
     4501 acggacccgc gatcgcctgc agggctttca cgccgccgtt agcttcagcc gggaagaatt
     4561 tgaactcttt caaaccgtag tccataccca gcatcagttc ggaaacagtg ctgatccccg
     4621 gaattagagg aatagtccct tcggtagcag ctttcagcag cggctcggtc agacccgggc
     4681 taattgcgaa ctgtgcaccc gcttcagtga cttctgccag ctgctgtgga ttcagcaccg
     4741 taccggcacc cacaatcgct tcaggcactt ctttggcgat agcacggata gcgtcaactg
     4801 cacactcggt acgcagagtc acttccagaa cgcgcacccc accagcaacc aacgcttttg
     4861 ccatcggcac tgcgtgttcc agttttttta ccacgataac cggtacaacc gggccggtgg
     4921 tcaggattga ttctgcactt gttttccagt ttttcatcag agttttctct cgcctgatta
     4981 caaatttgtc gtcttaaaaa gtgatacagg ttgcgccctg ttcggcaccg gacagttttt
     5041 cacgcaaggc gctgaataat tcacgtcctg tccccacgcg tgacgcgctc aggtcaggaa
     5101 tgtgcggttc gcgagcagcc agttccgctt cgtctaccag cagcgtcagt tcgcctgtct
     5161 gtccattcac acgaatgatg tccccgtcgc gcacttttgc cagcagcccg ccatcgtagg
     5221 cttctggtgt tacgtggata gctgacggca ctttacctga agcgccggag agtcgtccat
     5281 cggtaactaa cgcaattttg aaacaccggt ccaataatac accaagtggc ggcatgagtt
     5341 tatgtaattc tggcattccg ttcgcttttg gcccctgatg acggacaaca acgacacaat
     5401 cgcggtccag caaacccgct tcaaaggccg gcataacgtc atgctggctt tcaaaaacaa
     5461 ccgctggcgc ttcaatcacc tggttctcaa ccggcacggc agaggttttc ataaccgcac
     5521 ggcccaggtt accgcttaac acttttgtcc caccatgatg agagaaaggt tgttcgaagg
     5581 aagcgatcac attgctgtcg agtgattttt ccgccccttc ccgccagtcc agttcaccat
     5641 tattcagcca tggttcaagg gtataacgag acagaccaaa gcctgccacc gtattgacat
     5701 cttcatgcag caggcctgct ttgagcagtt cacgcaccag aaccggtacg ccacctgccg
     5761 cctggaagtg gttaatatcg gccggaccgt tcgggtagag acgtgccatc agcggtacaa
     5821 catcagaaag gtcagagaag tcatcccagt taatctgaat accggccgcg cgcgccatcg
     5881 ccaccaggtg catggtgtgg ttagtggaac caccggtcgc cagcagtgca acgataccgt
     5941 tcaccaccac tttctcatcg atcatcttac cgatcggcat ccattcatta ccattaccgg
     6001 tcatgcgtgt aacctgacgc gcagcggcag cggtcaaagc atcgcgcagc ggagaatccg
     6061 gatgaacaaa agaagagcct ggcgactgca tccccataaa ttccaccacc atctggttgg
     6121 tgttggcagt accgtagaaa gtacatgttc ccggcgcatg gtaagacgcg gcttctgact
     6181 ccagtaaggc catgcggtcc actttacctt cggcataaag ctggcgaata cgcacttttt
     6241 ctttatttgg caaaccgctt gccatcggtc cagacggcac aaacaccgca ggcaaatgac
     6301 caaacgacag ggctgccatc gtcagacccg ggacaatctt gtcgcacaca ccgaggaaca
     6361 gagcaccatc aaacatgtta tgggacagcc ccaccgccgc agacatcgct atcacttcgc
     6421 ggcttagcag cgacaattcc attccatcct gcccctgggt gacaccatca cacatcgccg
     6481 gaacaccgcc cgcaacctga ccaaccgcat tcgcttcatg cagggcttta cgaatgattt
     6541 ctggatagtg ttcataaggc tggtgcgcgg agagcatgtc gttataggag gtgatgatgg
     6601 cgatattgtt acgcaacatg cttttcaaag aggctttgtc ttctggctgg caggcagcga
     6661 aaccgtgtgc caggttaccg catgccaact gcgaacgatg aacggtcgac gttttcgctt
     6721 gttctatccg ggcgagataa gcagagcgag tctcgcgcga acgttcaatg attcgatttg
     6781 ttacgcgtaa caattgtgga ttcataaagg ctcctgaaat tgagttgtca gagcaggatg
     6841 attcacaacg cgtttcattc agaggattta tgagtgaaac gcctgtaacc ggagctcata
     6901 gggcaaaaac gtttcagtca gtgtaataaa aaaagcctcg tgggtgaatc cgcacgaggc
     6961 ctgaaagtgt aaaaattgtt ctacaatctg tgcaagatca tgttaccggt aaaataacca
     7021 taaaggataa gcgcagatat tactcaaact cattccagga acgaccatca cgggtaatca
     7081 tcgccaccga ggcaacgggt ccccaggttc cggcctgata cggtttcggc gcatcattgt
     7141 ccatcgccca cgcctcagta atggagtcta cccatttcca ggcttcttcc acttcatcac
     7201 gacgtacaaa cagtgcctga ataccacgca tggtttccag cagcagacgt tcataggcat
     7261 ccgccagatg cgtctgatta aaggtttctg aatagctcag atccagcttg gtgatttgca
     7321 ggttatgttt gtggtcaagg ccaggaactt tattcagtac ctggatatcc acgccttcat
     7381 caggttgcag acggatagtc agtttattct gcggcagatc ctgccacgac tctttaaaca
     7441 gattcagttc aggtgttttg aaatagacca cgacttcaga acatttggtc ggcagacgtt
     7501 taccagtacg caggtagaat ggcacaccgg cccagcgcca gttatcaatg tcgacgcgga
     7561 tcgccacgaa ggtttctgta ttgctgctct tgttcgcacc ctcttcttcc agatatcccg
     7621 gcactttttt gccctgggcg aagcccgcag tatattgccc acgtacggtt ttttcgcgta
     7681 cgttggagcg gtcgatgcgg cgcagggact tcagtacttt cactttttca tcgcggatgc
     7741 tgtctgcgct caggtcagat ggcggagaca tcgcaatcat gcagagaatt tgtagcaggt
     7801 ggttctgaat catgtcacgc atctgaccgg ctttatcaaa atagccccag cgcccttcga
     7861 tccccacttc ttctgccacg gtaatctcaa catgatcaat ggtgcgattg tcccagttat
     7921 tcacaaacag ggagttagca aaacgcagcg ccaacaggtt cagcaccgtt tctttaccaa
     7981 gatagtggtc gatacggtaa acctggcact cctcgaagta ttcgccaacc tgatcattga
     8041 tttcctgcga ggtcgccagc gacgtcccca gcggtttctc catgactacg cgtgccggtt
     8101 tagcattcag ttttgcctcg ccaagccctt tgcaaattgc gccaaaagtg ctgggcggca
     8161 tggcaaagta gttaatggtg atacgatttt tttgatccag catcgcgccg agacggttga
     8221 atgcagcagt gtcattgaca tcgagattac aaaaatccag acgtgcactc agggtgtccc
     8281 ataaaccttc atcaatggtt tctttcatga aagtttcgag cgcctcgcgg acaactttgg
     8341 tatatgccgc tttatcccag tcagcacgcc ctacgccgat aatccgggtg tccgggttga
     8401 gctgaccggc tttttccagt tgatacaggg aaggcagcaa tttacgacgc gcaaggtcgc
     8461 ctttcgcgcc gaaaatgacc aggtcacagg cctgggctgt ttgcgttacc gccatgtcat
     8521 tctccttaag ttaactaacc cggtacttaa gccagggtat acttgtaatt ttcttacggt
     8581 gcactgtact gcttttacga gcttgcgaaa actgtaaacg cttatccacc cgtgcgatta
     8641 cgggaaaagc gcgcaaagcg cggcaaaact gataaaaaaa tcatcgtttt ccattcggta
     8701 aaaatctgac actgatcatg ttatgaaaaa aaataacaac ttttttatct gcttttgtca
     8761 ttaacacggc acacaggcgt aatatctgac aaaactgcat ttcgatttct ttcagtgcgg
     8821 aaatcgtcat tacccgtgag tctctttaca tcatgaatat gctggaaaaa atccagtctc
     8881 agctggaaca tttgagcaaa tcagagcgca aagttgccga ggtcattctg gcttcgcccg
     8941 ataacgcgat ccattcgagt attgctgcta tggcactgga agccaatgtt agcgaaccga
     9001 cggtgaatcg tttctgtcgc agcatggaca cgcgcggttt tcctgatttt aaacttcatc
     9061 tggcacagag tctggcgaat ggcactccct atgttaatcg caatgtcaat gaagatgaca
     9121 gcgttgaatc atacacaggg aaaatatttg agtccgcaat ggcaacgctt gatcatgtcc
     9181 gtcattcact ggataaatct gccatcaacc gcgccgtcga cttgctcact caggcaaaaa
     9241 aaatcgcctt tttcggatta ggctcttcag ccgccgttgc ccacgatgcg atgaataagt
     9301 tctttcgttt taatgttccg gtggtgtact ccgatgatat cgtgctgcaa cgcatgagtt
     9361 gtatgaattg tagcgacgga gacgtggtgg tgctgatttc tcacactgga agaacaaaaa
     9421 atctggtcga gctggcgcag ctggctcgcg aaaacgacgc aatggtgatt gccctcacct
     9481 ctgcgggtac cccgctcgcc cgggaagcaa cgctggcaat taccctcgac gtaccggaag
     9541 atactgacat ttatatgccc atggtttctc gacttgcaca gctgaccgtg atagatgtgc
     9601 tggcgacagg atttactttg cgacgcggtg caaaattcag agataacttg aagcgggtca
     9661 aggaagcgct gaaggaatcg cgttttgata agcagttact taatttaagt gacgatcgct
     9721 aaaaacgact gtcactgtcc taatcttata cgacatccga atgagattaa tttatcgcca
     9781 tcgcggcgtt atttcattcg gatttcatgt tcaagcaaca cctggttgtt tcagtcaacg
     9841 gagtattaca tgtccagaag gcttcgcaga acaaaaatcg ttaccacgtt aggcccagca
     9901 acagatcgcg ataataatct tgaaaaagtt atcgcggcgg gtgccaacgt tgtacgtatg
     9961 aacttttctc acggctcgcc tgaagatcac aaaatgcgcg cggataaagt tcgtgagatt
    10021 gccgcaaaac tggggcgtca tgtggctatt ctgggtgacc tccaggggcc caaaatccgt
    10081 gtatccacct ttaaagaagg caaagttttc ctcaatattg gggataaatt cctgctcgac
    10141 gccaacctgg gtaaaggtga aggcgacaaa gaaaaagtcg gtatcgacta caaaggcctg
    10201 cctgctgacg tcgtgcctgg tgacatcctg ctgctggacg atggtcgcgt ccagttaaaa
    10261 gtactggaag ttcagggcat gaaagtgttc accgaagtca ccgtcggtgg tcccctctcc
    10321 aacaataaag gtatcaacaa acttggcggc ggtttgtcgg ctgaagcgct gaccgaaaaa
    10381 gacaaagcag acattaagac tgcggcgttg attggcgtag attacctggc tgtctccttc
    10441 ccacgctgtg gcgaagatct gaactatgcc cgtcgcctgg cacgcgatgc aggatgtgat
    10501 gcgaaaattg ttgccaaggt tgaacgtgcg gaagccgttt gcagccagga tgcaatggat
    10561 gacatcatcc tcgcctctaa cgtggtaatg gttgcacgtg gcgacctcgg tgtggaaatt
    10621 ggcgacccgg aactggtcgg cattcagaaa gcgttgatcc gtcgtgcgcg tcagctaaac
    10681 cgagcggtaa tcacggcgac ccagatgatg gagtcaatga ttactaaccc gatgccgacg
    10741 cgtgcagaag tcatggacgt agcaaacgcc gttctggatg gtactgacgc tgtgatgctg
    10801 tctgcagaaa ctgccgcagg gcagtatccg tcagaaactg ttgcagccat ggcgcgcgtt
    10861 tgcctgggtg cggaaaaaat cccgagcatc aacgtttcta aacaccgtct ggacgttcag
    10921 ttcgacaatg tggaagaagc tattgccatg tcagcaatgt acgcagctaa ccacctgaaa
    10981 ggcgttacgg cgattattac catgaccgaa tcgggtcgta ccgcgctgat gacctcccgt
    11041 atcagctctg gtctaccaat tttcgccatg tcgcgccatg aacgtacgct gaacctgact
    11101 gctctctatc gtggcgttac gccggtgcac tttgatagcg ctaatgacgg cgtagcagct
    11161 gccagcgaag cggttaatct gctgcgcgat aaaggttact tgatgtctgg tgacctggtg
    11221 attgtcaccc agggtgacgt gatgagtacc gtgggttcta ctaataccac gcgtatttta
    11281 acggtagagt aatctcacct gccccggccg ctgatggccg gggtatttag caacacataa
    11341 attaggacta cttattcaat ccaatcataa tcacagcccc ctgtaaaatg aatacaggga
    11401 tagcctgaat ggagatctaa atagcttgca agacgtcgca tacccgcttc ctctgcaaca
    11461 ctatgtccaa taactgccat cggtaagcca ctatctttgg agtattgtgt ctgcacccat
    11521 gttttaattg aatcgttaat cgtaatataa taatcagcct gatattccat atattgtatt
    11581 ggatcacaaa aacagcctgc cccaatgcca acagttctga ctactct
//
LOCUS       DADMJE010000136        11405 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.137, whole genome shotgun sequence.
ACCESSION   DADMJE010000136 DADMJE010000000
VERSION     DADMJE010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11405)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11405)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11405
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.137"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..921
                     /gene="gap"
                     /locus_tag="JN001_003182"
     CDS             <1..921
                     /gene="gap"
                     /locus_tag="JN001_003182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY9054332.1"
                     /translation="DVVAINDLTSPKILAYLLKHDSNYGPFPWSVDFTEDSLIVDGKS
                     IAVYAEKEAKNIPWKAKGAEIIVECTGFYTSAEKSQAHLDAGAKKVLISAPAGEMKTI
                     VYNVNDDTLDGNDTIVSVASCTTNCLAPMAKALHDSFGIEVGTMTTIHAYTGTQSLVD
                     GPRGKDLRASRAAAENIIPHTTGAAKAIGLEIPELSGKLKGHAQRVPVKTGSVTELVS
                     ILGKKATAEEVNNALKQATTNNESFGYTDEEIVSSDIIGSHFGSVFDATQTEITAVGD
                     LQLVKTVAWYDNEYGFVTQLIRTLEKFAKL"
     gene            complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JN001_003183"
                     /pseudo
     CDS             complement(963..2403)
                     /gene="aldA"
                     /locus_tag="JN001_003183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310048.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
     gene            complement(2558..3400)
                     /locus_tag="JN001_003184"
     CDS             complement(2558..3400)
                     /locus_tag="JN001_003184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001027928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HAY9054333.1"
                     /translation="MNITPFPTLSPATIDAINVIGQWLAQDDFSGEVPYQADCVILAG
                     NAVMPTIDAACKIARDQQIPLLISGGIGHSTTFLYSAIAQHPHYNTIRTTGRAEATIL
                     ADIAHQFWHIPHEKIWIEDQSTNCGENARFSIALFNQAVERVHTAIVVQDPTMQRSTM
                     ATFRRMTGDNPDAPRWLSYPGFVPQLGNNADSVIFINQLQGLWPVERYLSLLTGELPR
                     LRDDSDGYGPRGRDFIVHVDFPAEVIHAWQTLKHDAVLIEAMESRSLRQKLPVCEPLV
                     CKRA"
     gene            complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JN001_003185"
     CDS             complement(3672..7574)
                     /gene="hrpA"
                     /locus_tag="JN001_003185"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310042.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase HrpA"
                     /protein_id="HAY9054334.1"
                     /translation="MTEQQKLTFTALQQRLDSLMLRDRLRFSRRLHGVKKVKNPDAQQ
                     AIFQEMAKEIDQAAGKVLLREAARPEITYPDNLPVSQKKQDILEAIRDHQVVIVAGET
                     GSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELKTEPGGCIGYKVRF
                     SDHVSDNTMVKLMTDGILLAEIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLP
                     RRPDLKIIITSGTIDPERFSRHFNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQ
                     AIFDAVDELSQESPGDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNR
                     VFQSHSGRRIVLATNVAETSLTVLGIKYVIDPGTARISRYSYRTKVQRLPIEPISQAS
                     ANQRKGRCGRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
                     FPFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLE
                     AQKHGCVREAMIITSALSIQDPRERPMDKQQASDEKHRRFHDKESDFLAFVNLWNYLG
                     EQQKALSSNAFRRLCRTDYLNYLRVREWQDIYTQLRQVVKELGIPVNSEPAEYREIHI
                     ALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGLFKKPPKWVMVAELVETSRLWGR
                     IAARIDPEWVEPVAQHLIKRTYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQI
                     DPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDETLFEF
                     YDQRISHDVISARHFDSWWKKVSRETPDLLNFEKSMLIKEGAEKISKLDYPNFWHQGN
                     LKLRLSYQFEPGADADGVTVHIPLPLLNQVEESGFEWQIPGLRRELVIALIKSLPKPV
                     RRNFVPAPNYAEAFLGRVTPLELPLLDSLERELRRMTGVTVDREDWHWDQVPDHLKIT
                     FRVVDDKNKKLKEGRSLQDLKDALKGKVQETLSAVADDGIEQSGLHIWSFGQLPESYE
                     QKRGNYKVKAWPALVDERDSVAIKLFDNPLEQKQAMWNGLRRLLLLNIPSPIKYLHEK
                     LPNKAKLGLYFNPYGKVLELIDDCISCGVDQLIDANGGPVWTEEGFAALHEKVRAELN
                     DTVVDIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMGGLVYRGFVTGNGFK
                     RLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVENVQQAWQQWINKLPPARREDEDVK
                     EIRWMIEELRVSYFAQQLGTPYPISDKRILQAMEQISG"
     gene            7775..8380
                     /gene="azoR"
                     /locus_tag="JN001_003186"
     CDS             7775..8380
                     /gene="azoR"
                     /locus_tag="JN001_003186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HAY9054335.1"
                     /translation="MSKVLVLKSSILAGYSQSNQLSDYFVEQWREKHSADEITVRDLA
                     ANPIPVLDGELVGALRPSDAPLTPRQQEALALSDELIAELKAHDVIVIAAPMYNFNIS
                     TQLKNYFDLVARAGVTFRYTENGPEGLVTGKKAIVITSRGGIHKDGPTDLVTPYLSTF
                     LGFIGITDVKFVFAEGIAYGPEMAAKAQSDAKAAIDSIVAA"
     gene            complement(8431..9747)
                     /locus_tag="JN001_003187"
     CDS             complement(8431..9747)
                     /locus_tag="JN001_003187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310040.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2/dual specificity phosphatase
                     family protein"
                     /protein_id="HAY9054336.1"
                     /translation="MITERRNVLLQGAGWLLLLAPFFFFTYGSLNQFTAVQDLNSHDI
                     PSQVFGWETAIPFLPWTIVPYWSLDLLYGFSLFVCSTTFEQRRLVHRLILATVMACCG
                     FLLYPLKFSFIRPEVSGVTGWPFSQLELFDLPYNQSPSLHIILCWLLWRHFRQHLAER
                     WRKVCGGWFLLIAISTLTTWQHHFIDVITGLAVGMLIDWMVPVDRRWNYQKPDQRRIK
                     IALPYVVGAGSCIVLMELMVMIQLWWPVWLCWPVLSLLIIGRGYGGLGAITTGKDSQG
                     KLPPAVYWLTLPWRIGMWLSMRWFCRRLEPVSKITAGVYLGAFPRHIPAQNAVLDVTF
                     EFPRGRATKDRLYFCVPMLDLVVPEEGELRQAVAMLETLREEQGSVLVHCALGLSRSA
                     LVVAAWLLCYGHCKTVDEAISYIRARRSHIVLKEDHKAMLKLWENR"
     gene            complement(9737..11405)
                     /locus_tag="JN001_003188"
                     /pseudo
     CDS             complement(9737..11405)
                     /locus_tag="JN001_003188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415928.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional alpha/beta hydrolase/class I
                     SAM-dependent methyltransferase"
BASE COUNT         2844 a         3097 c         2711 g         2753 t
ORIGIN      
        1 gacgttgtcg ctattaatga tctcacttcc ccaaaaattc tcgcctacct gctgaaacat
       61 gattcaaact acggaccatt cccctggagc gttgatttta cggaagattc acttatcgtt
      121 gatgggaaaa gtatcgcggt ttacgccgaa aaagaggcta aaaatattcc gtggaaagcg
      181 aaaggtgcag aaatcattgt cgaatgtact ggcttttata cctccgccga gaaatcgcag
      241 gcgcatcttg atgctggtgc gaagaaggtg ttgatttccg cccctgccgg tgaaatgaaa
      301 actatcgttt ataacgtcaa tgacgacact ctggatggca acgacaccat tgtttccgtg
      361 gcgtcatgca ccactaactg tcttgcgccg atggccaaag ccttgcatga cagtttcggg
      421 atagaagtcg gcacgatgac gaccattcat gcctatactg gcacccagtc actggtggat
      481 ggcccacgtg gtaaagattt acgtgcttca cgcgcagcgg cagaaaatat cattccccac
      541 actacggggg cggcaaaagc cattggtctg gagatcccgg aactgagcgg caaactgaaa
      601 ggtcatgcgc aacgcgtgcc ggtgaaaaca ggttcggtca ctgaactggt atcgattctc
      661 ggaaaaaaag cgactgccga agaggtgaat aacgcactta aacaagcaac caccaataac
      721 gagtcatttg gttataccga tgaagaaata gtctcttccg atatcattgg cagccatttc
      781 ggttcggtgt ttgatgccac gcaaacggaa attaccgccg tgggcgattt acaactggtg
      841 aaaacggtcg cctggtacga taacgaatat ggcttcgtca cgcagcttat tcgcaccctc
      901 gaaaaattcg ctaaactctg acgcgcacag gcggaggaaa aaacctccgc ctcttttact
      961 cattacgact gtaaataaac cacctgggtc tgcagatatt catgcaggcc atgtttacca
     1021 tctgcgccgc caataccgga tttacgccat ccggcgtgga agccttgcat agcttcgaag
     1081 ttttcacggt tgatgtaagt ttcaccaaac ttcagccctt taatggcttt catcgcgacg
     1141 ttcagatttt gggtatagat ttgatgaggt caggccgtaa tcactgtcat tagccattga
     1201 gatagcctct tccagcgtgt caaatgcgac caccggcaga accgggccaa aggtttcctc
     1261 atgcataatc gacatttcct ggcgaacatc cagcagcaat gtcggcggat aataatatcc
     1321 tttcccctct accgctttgc cacccaacgc cactctcgcc ccttcttcta ctgcgcgcgc
     1381 cactttttgc tcaacccttt ccaacgccgc ggcgttaatc aacggcccca tcgcaatgtc
     1441 gttgcgttca gcggggttac caaattgaac cgcctgcatc gcttcaccca gccgattgac
     1501 gaactgatca taaatgcctt tctgtacata aacacgttct gcacagttac acacttgccc
     1561 actattaatg acgcgtgaat caacgatggc tttgactgcc agttcaagat cggcatcgtc
     1621 cattacgata gctggtgctt taccccccaa ttccagacac actttggtga tgtttttcgc
     1681 cgcagtcgcc atgatcttct cacctgcaga gacgctgcct gtcatactga ccattgcgac
     1741 ctttgggtta cccgccagtt cttgcccaac ggtttcacca cgccccagta caaggttaaa
     1801 cacgccgcgc ggaaggccta tttcatcgac gattttggcg aatgcaatcg cattgtttgg
     1861 cgtaaattca ctaggtttaa tgacgatggt attaccggtc aaaagagcgg gagccatttt
     1921 gcgggcaatg aggaagaacg ggaagttcca cggcagaatg ccggtagtca caccaagcgc
     1981 acgtttaaac aaaagaatat tttctcctgg acgatcgctt tgaataatct cgccctcgta
     2041 acgccgtgcc cactccgcca tgtaatcgat atagtcggca gtaaaagcca cttcgacttc
     2101 agccagctgc tggatcttgc ccccttcttc aacaatcagc gcactgattt cactggcgcg
     2161 ttcgcggatc ccggcggaga ttttgcgcaa ccaactggcg cgttcaatag caggcaacgc
     2221 ttcccattct ggttgtgcac gttctgctgc atcgattgcc ttacgggcat cctcggcctg
     2281 accatcgggt atgcgggaaa tgacagcctc tgtagcaggg tttaccacat caatccatgc
     2341 gtctccacgc caggtaacaa actgtccatc gatatacata ggatgttgaa cgggtactga
     2401 catgggcgac tcctgtgatt tatatgtttg ttcttggtaa atacattgtt aattaacatc
     2461 aatcatcata gagacggcat cgtgaaagga caattctgtg aagggcttca taaaaacaag
     2521 tgtaaaagga ataaaaggca gaaataaaag tcaggagtca tgcccgtttg caaacaagtg
     2581 gttcacaaac gggcaatttt tgacgtaacg agcgactttc catcgcctcg atgagcaccg
     2641 catcgtgttt aagcgtttgc catgcatgga tgacttctgc cggaaaatca acgtgaacga
     2701 taaaatctcg cccgcgggga ccgtagccat cgctatcatc gcgtaaacgc ggcagctcgc
     2761 cagtgagtag tgagagataa cgctcaaccg gccataatcc ttgtaactga ttaataaaga
     2821 ttacactgtc tgcgttattt cctaactgag gaacgaatcc gggataactt aaccagcgtg
     2881 gtgcatcggg attgtcccca gtcatacggc ggaacgtcgc catcgtgctc cgctgcatgg
     2941 tggggtcctg aacaacgata gccgtatgaa ctcgttctac ggcctgatta aatagcgcga
     3001 tgctaaagcg tgcgttttca ccgcagtttg ttgactggtc ttcaatccag attttttcat
     3061 gcggaatgtg ccagaactga tgagcgatat ccgccaggat ggtcgcttct gctctgccag
     3121 tggtgcggat agtgttgtag tgcggatgct gtgcgatggc gctatacaaa aaagttgtcg
     3181 agtgaccgat accaccacta atcagtaaag gaatttgctg atcgcgagca atcttacatg
     3241 ccgcgtcgat agtcggcata accgcattgc ctgcaaggat cacgcaatcg gcctgatacg
     3301 gcacctcacc ggagaaatca tcctgcgcca gccactgtcc gataacattt atggcatcta
     3361 tagttgccgg cgaaagcgtc ggaaacgggg taatgttcat ggttcctcct tatcgttccc
     3421 ttaagaatac tgcgtgagat aatagtgaga agctgagcac tctgaaagga ggaagtcgta
     3481 tgtccttaac cgccactccg caagcctgac atatctttta aggaaatgct gtagataaac
     3541 attattcatc ttgcagcaga gaattgtatt tttctgaatt cctgaatttt tacccttacc
     3601 gttttagaat taataaaaaa cccggcgcta aatgcttacc gggttttaga tttattaggc
     3661 aaatagcagg gttaaccgct aatctgctcc atcgcctgca aaatacgctt atctgaaatc
     3721 ggataaggcg taccaagttg ttgagcgaag taactaacgc gcagctcttc tatcatccaa
     3781 cggatctctt tcacgtcttc atcctcacga cgtgcaggcg gcagtttgtt gatccattgc
     3841 tgccacgcct gctggacgtt ttcgactttc agcatctgtg cacgatcgcg atgtggatca
     3901 accgccagtt tttccagtcg tttttcaatc gcctgcaaat atcgcagcgt gtcgcccagc
     3961 cgtttgaagc cgttaccagt gacaaaaccg cgatatacca acccgcccat ctgcgcttta
     4021 atgtcagaaa gccccagtgc catggtcata tccacccgcc ctttcagacg tttgttgata
     4081 ttgaacactg ccgtaagaat ttgctcgacc tgcttcgcaa tatctaccac cgtgtcgttc
     4141 agttcggcac gcactttctc atgcagcgca gcaaagcctt cttccgtcca gaccgggcca
     4201 ccattggcgt cgatcagttg atccacaccg caggagatac agtcgtcgat cagctccagc
     4261 actttgccat acgggttgaa gtacagtccc agcttggctt tgttcggtaa cttttcatgt
     4321 aaatacttga tcggcgaggg aatatttagc agcagtagac ggcgaagacc attccacatt
     4381 gcctgttttt gctccagcgg gttatcaaac agtttgatcg ccacgctgtc gcgttcatcc
     4441 accagcgccg gccacgcctt cactttatag ttgccacgct tctgttcgta actttccggc
     4501 agctgaccaa aactccagat atgtaagccg ctctgctcga taccgtcatc cgccaccgcg
     4561 gacagcgttt cctgcacttt gcctttcagc gcatctttca gatcttgtag cgagcgccct
     4621 tcttttagct tcttgttttt gtcatccacc acgcggaagg tgattttcag gtgatcgggc
     4681 acctgatccc agtgccagtc ttcgcggtca acggtaacgc cggtcatccg ccgtaactcg
     4741 cgctcaaggc tgtcgagcaa cggtaactcc agcggtgtga cgcggcctaa aaacgcttcg
     4801 gcgtagtttg gtgcaggcac aaaattacgg cgtaccggtt tcggcaacga tttaatcaga
     4861 gcaatcacca attcgcggcg cagaccgggg atctgccatt caaacccgct ttcctcaacc
     4921 tggttaagta acggcagcgg aatatgtacg gtcacaccgt ccgcgtctgc gcctggctca
     4981 aactgatagc tcaaacgcag cttgagattg ccctgatgcc agaagttcgg gtaatccagc
     5041 ttgctgattt tttccgcccc ttctttgatc aacatgctct tttcaaagtt gagcaaatca
     5101 ggcgtttcgc ggctgacttt tttccaccag ctatcgaagt gacgagcgga gattacatcg
     5161 tggctgatgc gctggtcgta gaactcaaac agcgtttcgt catcaaccag aatatcgcgg
     5221 cgacgtgatt tgtgttccag ctcttccact tcggcccgca gtttcaggtt ttcacggaag
     5281 aatgcgtgac gcgtctgcca gtcaccttcc accagcgcat ggcgaataaa gagttcacga
     5341 cataacgccg gatcgatctg gctgtagttg accttgcgcg cggcaacaat cggcaaacca
     5401 taaacagtga ctttttccgt tgccatcacc gcgccctgcg cccgttccca gtgcggttcg
     5461 ctgtaggtac gtttaatcaa atgctgagcg acaggctcca cccattccgg gtcgatacgc
     5521 gcagcaatgc gcccccacag gcggctggtt tctaccagtt ccgccaccat tacccatttc
     5581 ggcggttttt tgaataaacc agaaccgggg aagatggaga aacgcgcgtt acgtgcgccg
     5641 gtatattctt gtttatcggc atctttcatg ccgatatggg aaagtaaacc cgtcagcaac
     5701 gcaatgtgaa tttcgcgata ctccgccggt tcgctgttaa ccggaatgcc aagttctttc
     5761 accacctgac gcaactgggt gtagatatcc tgccattcgc gcacgcgcag atagttgaga
     5821 taatcggtac gacacaggcg acggaaggcg tttgaagaaa gcgccttttg ctgctcgcca
     5881 agataattcc acagatttac aaacgcgagg aagtcggatt ctttgtcgtg gaagcgacga
     5941 tgtttttcgt ccgatgcctg ctgtttgtcc atcggccgct cacgcgggtc ctgaatggag
     6001 agcgcggacg tgataatcat cgcctcacgc acgcagccat gtttctgcgc ttccagcacc
     6061 atacgcgcca gacgaggatc gaccggcagt tgcgagagct ggcgaccgag cggcgtcagt
     6121 ttataggcgc tggcctgttc atccgtggtg atcgcgccca gttcttcgag cagacgcacg
     6181 ccatcctgga tattgcgttt atccggtgct tcgacaaacg ggaacgcagc gatatcgccc
     6241 agccccagcg cggtcatctg caaaataacc gaggccaggt tggtacgcag aatctccgga
     6301 tcggtaaact ccgggcgcga gaggaaatcg tcttcggaat agagacgaat acagatccct
     6361 tcggacacac gaccacaacg gcctttacgc tgattggcag acgcctgtga aatgggttca
     6421 atcggcaaac gctgcacttt ggtgcgatag ctgtagcggc tgatacgcgc cgtaccgggg
     6481 tcgataacgt atttaatccc cagtacagtc agcgaggttt ccgcgacgtt ggtcgccagc
     6541 acaatgcgtc gcccgctgtg cgactggaac acgcggttct gttcgctatt cgaaagccgc
     6601 gcataaagcg gcaagatttc ggtatggcgt aagttcagct tgttcagcgc atcggcggta
     6661 tcgcgaattt cccgctcgcc gctcataaag atcagaatgt cgccagggct ttcctggctc
     6721 agttcgtcta cggcgtcaaa aatcgcctgc aactgatcgc gctcggtgtc atcggcttct
     6781 tcaacaatcg ggcgatagcg cacttccacc ggataggtcc gaccggagac ttcgataatc
     6841 ggcgcattat taaagtggcg agaaaagcgt tccgggtcga tagtcccgga agtgataatg
     6901 atttttaggt caggacgccg cggcagcaac tctttcaaat agccgagcag aaaatcgata
     6961 ttcaggctgc gttcgtgtgc ttcgtcaata atgatggtgt cgtactgcat cagcaggcgg
     7021 tcttgctgga tctccgccag caggataccg tcggtcatca gcttgaccat cgtgttatca
     7081 cttacgtgat cgctgaaacg cactttgtaa ccgatgcaac cgcctggctc cgttttcagc
     7141 tcttccgcaa tacggttcgc caccgttctt gccgccagac gacgcggctg ggtatggccg
     7201 atcagtcctt taatcccgcg ccccagctcc atacagattt tcggtagctg ggtcgtttta
     7261 ccggaaccgg tttccccggc gacgatcacc acctggtgat cacgaatcgc ttcgagaata
     7321 tcctgttttt tctgactaac tggcaaattg tccggataag tgatttccgg tcgtgccgct
     7381 tcacgcagca ggactttccc tgccgcctgg tcaatctctt tcgccatctc ctggaaaatg
     7441 gcctgttgtg catcaggatt tttaaccttc ttaacaccat gcagacggcg agaaaaacgc
     7501 agtctgtcgc gcagcatcaa cgaatccagc cgctgctgca aagcagtaaa ggtcaatttt
     7561 tgttgttctg tcataacgtt agtgggcagt agtctgcctg attaattttc ttttaaatga
     7621 tagatataga gtaccacatc gcggctttct atgcgttgtt caataaattc gaacataggc
     7681 ttcgatttat tgcgctatct ctgtggcagg attgtgaata aagtgtcagc aagcaacggg
     7741 gcatcgccaa ttcaaacatc tataaggaaa caccatgagc aaggtattag ttcttaaatc
     7801 cagcatcctg gcagggtact ctcagtctaa tcagttgtcc gattattttg ttgaacaatg
     7861 gcgcgaaaag cactccgctg atgaaatcac cgttcgcgac ctggctgcaa atccgattcc
     7921 ggtactggat ggcgaactgg ttggcgctct gcgtccgagc gatgcgccgc tgactccgcg
     7981 tcagcaggaa gctctggcgc tttccgatga gctgattgcc gagctgaaag cccacgacgt
     8041 tatcgttatt gcggcaccga tgtataactt caacatctca actcagttga aaaactattt
     8101 tgacctggtt gcacgcgcag gcgttacttt ccgctatacc gagaacggtc cggaaggtct
     8161 ggtaacgggt aaaaaagcca tcgttattac cagccgcggt gggatccaca aagatggacc
     8221 aacggacctg gtgacgccgt atctgtccac gttcctcggc tttatcggca ttaccgatgt
     8281 gaaatttgtc ttcgccgaag ggatcgcata cggtccggaa atggcagcga aagcgcagtc
     8341 tgacgcgaaa gcggccatcg acagcattgt tgctgcataa ccggacacga tcttgatgtg
     8401 gactgtagtt cagtccacat ctcaatccac ttacctgttt tcccataatt tcagcatcgc
     8461 tttgtgatct tccttaagca caatatgcga acgtctggct cgaatataac taatcgcttc
     8521 atcaacggtt ttacagtgtc cgtaacataa caaccatgcc gccactacca gcgcactgcg
     8581 cgataatccc aacgcgcaat ggaccagaac gctgccttgc tcttcgcgta atgtttccag
     8641 catcgccacg gcctgtcgga gctccccctc ttccggaacc accagatcca gcatcggtac
     8701 acagaaatag agtcgatctt ttgtcgctcg tccccgaggg aattcaaagg tgacgtccag
     8761 aaccgcattc tgtgccggaa tatgtcgtgg aaacgcccct aaataaacac cagcagtaat
     8821 tttgctcacc ggctccaggc gacgacaaaa ccaacgcata gacagccaca tcccgatgcg
     8881 ccagggcaat gtcagccagt aaacggcggg cgggagtttc ccctgactat ctttccctgt
     8941 tgttatcgcg ccaagcccac cgtacccacg gccaataatg agtagcgata atactggcca
     9001 acataaccag actggccacc ataactgaat catcaccatt agctccatca acacaatgca
     9061 cgagcccgcg cctacgacat atggcagtgc tattttgatt cgacgttgat caggtttctg
     9121 ataattccaa cgacgatcga cgggcaccat ccagtcaatc aacataccta ccgccagccc
     9181 tgtgatgaca tcaataaaat gatgctgcca ggtcgtcaga gtagaaatag cgatgagtaa
     9241 aaaccatccg ccacagactt tacgccacct ctcagccaga tgctgacgaa agtgacgcca
     9301 aagtagccag cagagaataa tatgcagcga aggagactgg ttataaggca gatcaaacag
     9361 ttcaagttgc gaaaatggcc atcccgtcac cccactcact tcaggacgga taaaactaaa
     9421 cttcagcgga tagagcaaaa aaccgcagca ggccattacc gttgccagaa taagccggtg
     9481 gacaagtcgg cgctgttcga atgtcgtgct acaaacgaac agcgaaaatc catataaaag
     9541 atccagactc cagtaaggaa caatagtcca gggaagaaaa gggatcgccg tttcccaacc
     9601 gaatacctga ctggggatat catggctgtt aaggtcctga accgcggtga actgattaag
     9661 agatccatag gtgaagaaaa aaaacggggc cagcaacaat aaccagccag cgccttgtag
     9721 caatacgttc cgacgttcag ttatcacgac gcaccgccat cgaaaccgta aaaatacccc
     9781 actcatcaat ccgttgtgtg catttatcaa atccggcatc acgcacgagt gaatccatct
     9841 ccccttgcga acgcacgcgc attacccacg gtttaccatc tttatgactg gttaacaccc
     9901 cggcaatcat ctccagttga gggtgccacg gctgcccggt gtagatgaga atgccgaccg
     9961 gttcgatggc attggcaaga cctgcgagtg agttttttac ctgctcattt tcgggaaaaa
    10021 gctcatacag tccagagaca attgccagcg taggccgcgg agttaacgcg ctgagttcct
    10081 ccgggttaaa cgcatcgccc tgttcaaaac gcacccgccc agacattccc cgttgggcaa
    10141 tcatctcttg cccctgtgca acatttaact cgctgtaatc acgtaacaaa atatcgctta
    10201 cggcaggctc gtttgccagc gcatccagta catagcgccc atgccctgcg gcaatgtcaa
    10261 ccacgcggac ggctaaacct ttggcgtgga gatcggcaac ggcttgttta atcagtattt
    10321 gtaaatgggt tttgcgctgg cgaataccgc gccagccaac actgttcagg tagattttgt
    10381 cgattaagcg cccgaatgcg ttactacctt gcggttgatt ttgatagaca taatccagcg
    10441 aactgcctga atcaaagccg gtgctcattc cgagatgcag gcccgcagag tgcgtcccga
    10501 acaatttcat cgcctttcgc ataaagcgat acgctaaatc aaccggcgat aatagcacgg
    10561 gtccaccaga aagtagccgc cattgatccg ctgatggtcc tgtgcagtct tcatgctgat
    10621 aatcaaattt ttgcgatttg ttagcatata aacgactaat aaagctttgc attttttcaa
    10681 atgccagcgc cctgttctct tcacccaacg tgtcgtgata aaagcctggc agcagatgca
    10741 gctctttcag agggctacgt aatctctgat aaaaatcaat ctgcggttgg cgatgcacca
    10801 catagtcatc acctgatatc agaagttgcg tggggagcgt aatcgccgcc gcatctctaa
    10861 taatacgttc agacgtttta tagagatcga gcaagatatt gacggcaatc gcccgtgtga
    10921 tcagcggatc attattgaaa ctcgccaccc gttgccgatc gtgggtcaaa tagcgtcctt
    10981 tcacatagga attaataaaa aacagaccac gcagacgatg ccataacgcc agcgcaggac
    11041 gtgccagcgg cacatacaat ttaaccttaa aggccggaga agccagcacc agcccgcgaa
    11101 ttgcaggcgc ataatcatga acctatgtgg caaccagcac tgcgccgacg ctttgcgcga
    11161 tcacaaccac ctcttccagt ccaacctagc tgtcgctggc agcaaaacgg acaaattcat
    11221 cgacatcctg cactgaacgc gcaagagatg ggctataacc acgcggcccc gaagtttttc
    11281 catgcccccg agcatcccat gcataaaaag cagtatctgg catcgccagt tcatcaacga
    11341 tatgttgtag acgaccagaa tgttcatggc cacgatgaaa taagacaatg acctttttcg
    11401 cccct
//
LOCUS       DADMJE010000137        11330 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.138, whole genome shotgun sequence.
ACCESSION   DADMJE010000137 DADMJE010000000
VERSION     DADMJE010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11330
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.138"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            86..523
                     /locus_tag="JN001_003189"
     CDS             86..523
                     /locus_tag="JN001_003189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001524956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HAY9054337.1"
                     /translation="MKTIKPESIALFCLLSGDVDLAKHLADILPITCFVGEDWQQDFQ
                     PLDGGPVQSLSDSYSDYSVLLLIAAESEISVPEWLAHSEGTTVILIAEHNARLLTGPA
                     GGAVALIHYLNEICHSRETAVNDAFCRTLTRGSLAIPQCHLLS"
     gene            657..1201
                     /gene="cobU"
                     /locus_tag="JN001_003190"
                     /pseudo
     CDS             657..1201
                     /gene="cobU"
                     /locus_tag="JN001_003190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416497.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
     gene            1198..1941
                     /gene="cobS"
                     /locus_tag="JN001_003191"
     CDS             1198..1941
                     /gene="cobS"
                     /locus_tag="JN001_003191"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HAY9054338.1"
                     /translation="MSKLFWAMLSFITRLPVPRRWSQGLDFEHYSRGIITFPLIGLLL
                     GAISGLVFMVLQAWCGVPLAALFSVLVLALMTGGFHLDGLADTCDGVFSARSRDRMLE
                     IMRDSRLGTHGGLALIFVVLAKILVLSELALRGEPILALLAAACAVSRGTAALLMYRH
                     RYAREEGLGNVFIGKIDGRQTCVTLGLAAIFAAVLLPGMHGVAAMVVTMVAIFILGQL
                     LKRTLGGQTGDTLGAAIELGELVFLLALL"
     gene            1953..3032
                     /gene="cobT"
                     /locus_tag="JN001_003192"
     CDS             1953..3032
                     /gene="cobT"
                     /locus_tag="JN001_003192"
                     /EC_number="2.4.2.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide--dimethylbenzimidazole
                     phosphoribosyltransferase"
                     /protein_id="HAY9054339.1"
                     /translation="MQTLADLLNTIPAIDPAAMSRAQRHIDGLLKPVGSLGRLEALAI
                     QLAGMPGLNGVPHVGKKAVLVMCADHGVWEEGGAISPKEVTAIQAENMTRGTTGVCVL
                     AAQAGANVYVIDVGIDTAEPIPGLINMRVARGSGNIASAPAMSRHQAEKLLLDVICYT
                     RELAKNGVTLFGVGELGMANTTPAAAIVSTITGRAPEEVVGIGANLPTDKLANKIDVV
                     RRAITLNQPNPQDGVDVLAKVGGFDLVGMAGVMLGAASCGLPVLLDGFLSYAAALAAC
                     QMSPAIKPYLIPSHLSAEKGARIALSHLGLEPYLNMEMRLGEGSGAALAMPIIEAACA
                     IYNNMGELAASNIVLPGNTTSDLNS"
     gene            3094..4029
                     /gene="ldtA"
                     /locus_tag="JN001_003193"
     CDS             3094..4029
                     /gene="ldtA"
                     /locus_tag="JN001_003193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310812.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HAY9054340.1"
                     /translation="MMRRVNIFCSFALLFASHTSLAVTYPLPPEGSRLVGQSYTVTVP
                     DHNTQPLETFAAQNGQGLSNMLEANPGADVFLPKSGSQLTIPQQLILPATVRKGIVVN
                     VAEMRLYYYPPDSNTVEVFPIGIGQAGRETPRNWVTTVERKQEAPTWTPTPNTRREYA
                     KRGESLPAFVPAGPDNPMGLYAIYIGRLYAIHGTNANFGIGLRVSQGCIRLRNDDIKY
                     LFDNVPVGTRVQIIDQPVKYTTEPDGSNWLEVHEPLSRNRAEYEFDRKVPLPVTPSLR
                     AFISGQEVDVNRANAALQRRSGMPVPISSGSRQMF"
     gene            complement(4085..4160)
                     /locus_tag="JN001_003194"
     tRNA            complement(4085..4160)
                     /locus_tag="JN001_003194"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(4125..4127),aa:Asn,seq:gtt)
     gene            4487..4858
                     /locus_tag="JN001_003195"
                     /pseudo
     CDS             4487..4858
                     /locus_tag="JN001_003195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416493.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            4857..5291
                     /locus_tag="JN001_003196"
                     /pseudo
     CDS             4857..5291
                     /locus_tag="JN001_003196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310806.1"
                     /note="Catalyzes the hydrolysis of AMP to form adenine and
                     ribose 5-phosphate using water as the nucleophile;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP nucleosidase"
     gene            5634..6350
                     /locus_tag="JN001_003197"
     CDS             5634..6350
                     /locus_tag="JN001_003197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY9054341.1"
                     /translation="MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELN
                     TSLKFVIERAKQAQVPKHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSN
                     VNRTIANVRTIFNKKGGNIGAAGSVSYMFDNTGVIVFKGSDPDHIFEILLEAEVDVRD
                     VTEEEGNIVIYTEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGL
                     VDALEDDDDVQKVYHNVANL"
     gene            complement(6806..6881)
                     /locus_tag="JN001_003198"
     tRNA            complement(6806..6881)
                     /locus_tag="JN001_003198"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(6846..6848),aa:Asn,seq:gtt)
     gene            complement(6982..8625)
                     /gene="yeeO"
                     /locus_tag="JN001_003199"
     CDS             complement(6982..8625)
                     /gene="yeeO"
                     /locus_tag="JN001_003199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416491.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic metabolite efflux MATE transporter YeeO"
                     /protein_id="HAY9054342.1"
                     /translation="MLRHILTAKNLLSNPIFKFPNCLPFLSTVCCICRQFVGENLCSF
                     ADSPSLFEMWFHFLQLRSALNISSALRQVVHGTRWHAKRKSYKVLFWREITPLAVPIF
                     MENACVLLMGVLSTFLVSWLGKDAMAGVGLADSFNMVIMAFFAAIDLGTTVVVAFSLG
                     KRDRRRARVATRQSLVIMTLFAVLLATLIHHFGEQIIDFVAGDATTEVKVLALTYLEL
                     TVLSYPAAAITLIGSGALRGAGNTKIPLLINGSLNILNIIISGILIYGLFSWPGLGFV
                     GAGLGLTISRYIGAVAILWVLAIGFNPALRISLKSYFKPLNFSIIWEVMGIGIPASVE
                     SVLFTSGRLLTQMFVAGMGTSVIAGNFIAFSIAALINLPGSALGSASTIITGRRLGVG
                     QIAQAEIQLRHVFWLSTLGLTAIAWLTAPFAGVMASFYTQDPQVKHVVVILIWLNALF
                     MPIWSASWGLPAGFKGARDARYAMWVSMLSMWGCRVVVGYVLGIMLGWGVVGVWMGMF
                     ADWAVRAVLFYWRMVTGRWLWKYPRSEPQKCEKKPVVSE"
     gene            8630..8705
                     /locus_tag="JN001_003200"
     tRNA            8630..8705
                     /locus_tag="JN001_003200"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:8663..8665,aa:Asn,seq:gtt)
     gene            8867..10129
                     /locus_tag="JN001_003201"
     CDS             8867..10129
                     /locus_tag="JN001_003201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000055676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY9054343.1"
                     /translation="MSLNDSKIRNLKPSSKPVKLSDSHGLYLLVNQGGSRIWYLKYRF
                     SGKESRVSLGAYPLVSLAEARQRRDDIRKLLTQNINPAHQRMSDKAAASPEKYFKAVA
                     LAWHKTNKKWSPDYAARILASMENHIFPAIGHLPVTTLKTQNFTALLRVIEDKGFLEV
                     ASRTRQQLCNIMRYAVQQGFTENNLAQHLEGVTAPPVKNHYPALPLERLPELFERIGD
                     YQQGRQLTRLAVVLTLHLFIRSSELRFARWGEIDFRNKIWTIPATREAIEKVRFSGRG
                     AKMRTPYIVPLSRQAIAILKQIKEISGHLELVFPGDHNPYKPMSENTVNRALRLMGYD
                     TKTDVCGHGFRTMACSALVETELWSRDTVERQMSHQERNSVRAAYIHRAEHLDARTAM
                     MQWWSDYLDVSREGYVAPYIYARRHKAA"
     gene            complement(10848..>11330)
                     /locus_tag="JN001_003202"
     CDS             complement(10848..>11330)
                     /locus_tag="JN001_003202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY9054344.1"
                     /translation="MAAALELSRLMGLRSQEVVQSAQSLRTWKQSLERGEPRLTVVFG
                     TKGGRPRETVILDAVAIRKALDNALVVAEDRHGRLIDKPDLKSAMKYWHSQASRLGLT
                     GTYSPHSLRYAWAQDAIRHYLAQGFSEKEALAMTAMDLGHGDGRGRYVAQVYGRKDTD
                     "
BASE COUNT         3010 a         2646 c         2760 g         2914 t
ORIGIN      
        1 gggctgcatt caaggtgtgg caatattgtt tcatggctta tcaaccagag cgccattaca
       61 ggaaattaag tggagggcga gaggcatgaa aacgataaaa cccgaatcga tagctctttt
      121 ttgcctctta tctggagatg tggatctggc gaaacatctg gctgatatat tgccaataac
      181 ctgttttgtt ggtgaggact ggcagcaaga tttccagcct cttgatggtg ggcctgtgca
      241 atcgttatca gattcgtata gcgattattc agtgctgcta ttgatagcag ctgaaagcga
      301 gatatccgta ccagaatggc tcgctcattc tgagggaacg acggtaattt tgattgcaga
      361 acacaatgcc cgtttgctga ctggtccggc tggtggggct gtagcattaa tccattatct
      421 gaatgaaatc tgtcattcca gagaaaccgc tgtcaatgac gcattttgtc ggacgttaac
      481 acgaggaagt ctggctattc cgcaatgcca tcttctttcg taatggattg agaatgctgg
      541 atttttaatt atattacgcg cagtattaat cgcgtaaatg ttttgcggtc agcaacggtg
      601 ggggatccat tgttctgttc aatgaatacc atcatacaat tgaatcagga gtcggtatga
      661 tgatttcggt gacggggggc gtacggagcg ggaagagtcg ccacgcagag gcgcttattg
      721 gggactcttc acaggttctg tatacgccac ctcgcaaatc cttgatgatg agatggctgc
      781 acggatagaa catcatcggc aaggccgccc gacgcactgg cacacagtgg agcgctggca
      841 acatcttgat gaattaattc atgcagacat taacccgcat gaggctgtat tgctggaatg
      901 cgttaccacc atggtgacta atctgttgtt tgattatggc ggcgataaag accctgatga
      961 atgggattat caggcgatgg aacaggcgat taatgctgag attcagtcgt tgattgctgc
     1021 ctgccaacgt tgtcccgcaa aggttgtatt agtgactaac gaagtgggaa tggggattgt
     1081 gccggagagt cgtctggcac gacattttcg tgatattgcc gggcgggtaa atcagcagct
     1141 ggccgctgcg gcaaatgaag tatggttggt ggtttcgggt attggagtaa aaatcaaatg
     1201 agtaaattat tttgggcgat gctctctttt attacgcgtc tgcctgtacc gcgtcgctgg
     1261 tcccagggac tggatttcga gcattattct cgcggtatta ttacttttcc tttaattgga
     1321 ttattgcttg gcgcgattag cgggctggtc ttcatggtgc tgcaggcatg gtgtggcgta
     1381 ccactggcgg cactgtttag cgtacttgtg ctggcgctga tgaccggggg attccacctg
     1441 gacggcctcg ccgatacctg tgatggcgta ttttctgcac gtagccgcga tcgcatgttg
     1501 gaaatcatgc gtgatagccg tttaggcacc cacggcggtc tggcattgat ttttgttgta
     1561 ctggcaaaga ttctggtatt aagcgagttg gctctgcgtg gcgaaccgat ccttgcattg
     1621 ctggcggcag catgtgcggt cagccgcggg actgccgcat tattgatgta tcgtcatcgt
     1681 tatgcccggg aagaaggact tggcaatgtg ttcattggca aaattgatgg gcgacaaacc
     1741 tgcgtcacac tcggcttagc cgctattttt gctgccgtat tattgccggg tatgcatggt
     1801 gtggctgcta tggtggtgac gatggtggcg attttcatcc tcggtcagct tctcaaacgt
     1861 acgctgggcg ggcaaaccgg cgatacgctg ggagctgcta tagagcttgg tgaactggtc
     1921 ttcctgctgg cactgctata aagagacgtg acattcaaac acttgccgat ttactgaata
     1981 cgatccctgc tatcgatcct gccgctatgt cgcgtgcaca acggcatatc gacgggttac
     2041 tcaaacctgt tggtagcctg ggaaggctgg aggcgcttgc catacaactg gcaggaatgc
     2101 cggggttgaa tggcgttccg catgtgggca aaaaagcggt actggtcatg tgtgccgatc
     2161 acggcgtctg ggaggaaggg ggcgctattt ccccaaaaga agtgacagcc attcaggctg
     2221 aaaatatgac ccgcggaaca accggcgtgt gtgtgctggc agcacaagcg ggcgctaacg
     2281 tctacgtaat tgatgttggt attgatactg ctgagcctat ccccgggctt atcaacatgc
     2341 gtgttgctcg aggtagtggc aatattgctt cagctccggc aatgagtcgc catcaggcag
     2401 aaaagttgct tttggacgtc atatgttata cgcgggagct ggcaaaaaac ggtgttacgc
     2461 tgtttggtgt aggtgaactg gggatggcaa acacgacacc ggcagcggca atagtcagca
     2521 caatcactgg ccgggctcct gaagaagtgg ttgggattgg cgcaaacctg ccgacagata
     2581 aactggctaa taaaattgat gttgtgcgcc gggcgattac gttgaatcaa ccaaatccgc
     2641 aggatggcgt tgatgtcctg gcaaaagtgg gtggatttga tttggtcgga atggctggcg
     2701 tgatgttagg cgctgcgtcc tgcggtttac ccgtgttgct ggatggattt ctttcttatg
     2761 ctgctgcgct cgcagcctgt cagatgtctc ctgcaatcaa accgtatctc attccttctc
     2821 acctgtcggc agaaaaagga gcgcgtatag cgctgtcgca tttggggctg gagccttatc
     2881 tcaatatgga gatgcgttta ggtgagggga gtggcgcagc tctggcgatg cccatcatcg
     2941 aagctgcctg tgcgatatat aacaacatgg gcgaacttgc tgccagtaat attgttctac
     3001 cggggaatac gacttctgat ttgaacagtt aaaaacgaaa agtctgataa aagctatact
     3061 taacggatag ctttcgcgac ttaggaaagg gacatgatgc gtcgtgtaaa tattttttgc
     3121 tcatttgctc tgctttttgc cagccatact agcctggcgg taacttaccc attacctcca
     3181 gagggtagcc gtttagtggg gcagtcgtat actgtaactg ttcctgatca caatacccag
     3241 ccgctggaga cttttgccgc acaaaacggg caagggttaa gtaacatgct ggaagcgaac
     3301 ccgggtgctg atgttttctt gccgaagtcc ggctcgcaac tcaccattcc gcagcaactg
     3361 attttgcccg ccactgttcg taaagggatt gtggttaacg tcgctgagat gcgtctttat
     3421 tactacccac cagacagtaa tactgtggaa gtctttccta ttggtatcgg ccaggctggg
     3481 cgagaaaccc cgcgtaactg ggtgactacc gttgaacgta aacaagaagc tccaacctgg
     3541 acgccaacgc cgaacactcg gcgcgaatat gcgaaacgag gggagagttt gcccgcattt
     3601 gttcctgcgg gccccgataa tcccatgggg ctgtacgcga tttatattgg caggttgtat
     3661 gccatccatg gtaccaatgc caattttggt attgggctcc gggtaagtca gggctgtatt
     3721 cgtctgcgca atgacgatat caaatatctg tttgataatg ttcctgttgg gacgcgtgtg
     3781 caaattatcg accagccagt aaaatacacc actgaaccag atggctcgaa ctggctggaa
     3841 gttcatgagc cgttgtcgcg caatcgtgca gaatatgagt ttgaccgaaa agtgccattg
     3901 ccggtaaccc catctttgcg ggcgtttatc agcgggcaag aagttgatgt aaatcgcgca
     3961 aatgctgcgt tgcaacgtcg atcgggaatg cctgtgccaa ttagttctgg ttcaagacag
     4021 atgttttaag agcgttggta attagaaagc aaaaagcctg ctagaaagca ggcttttttg
     4081 aatttggctc ctctgactgg actcgaacca gtgacatacg gattaacagt ccgccgttct
     4141 accgactgaa ctacagagga atcgtgtgaa cggggcgcat attaatggca gtgcatggtg
     4201 atgtcaaagg gtgaaatgca tttttttgtt tgtttgctgt caatttcaac aaagtggtga
     4261 gctttcaatc ttattgggta atgaaccatc gtggtgcata ccctcctttt atagggcagg
     4321 ggaacgcgac agctgattaa aggagcaaat gacgaatcta tcataatctc ttatttgaca
     4381 gttggttagc ttgtacatca acgccaaaat aaaactggca agcatcttgc aatctggttg
     4441 taagtaatgg cggcacttgg gccgattctt aaaaaccgga ggcaacatga acttcagacg
     4501 cctgaaatac ttcgtaaaaa ttgtagatat tggtagcctg acccaggctg ctgaagtatt
     4561 gcatatcgca caaccagcgc tcagccagca ggttgccaca ctggaaggtg agttaaatca
     4621 acaacttttg atccgtacaa agcggggcgt tacgccaaca gacgccggaa aaattctcta
     4681 tacccatgcg cgggccattt tacgtcagtg tgaacaggcc caactggcgg tgcataacgt
     4741 tggtcaggca ttatcggggc aagtctcgat tggctttgca ccaggaaccg ctgcgtcatc
     4801 catcaccatg cccttattac aggcggttcg cgctgaattt ccggagatcg ttatctatcc
     4861 cgagcattgc tgaagtgcaa cgtgcgcttt atgacgccac caagctggtg agcggcaggc
     4921 ccggtgagga agtcaaacag cggctacgta ctggtactgt ggtaaccaca gatgacagga
     4981 actgggaatt acgttactca gcttctgcac ttcgttttaa cttaagccgg gccgtagcaa
     5041 ttgatatgga aagtgcaacc attgccgcgc aaggatatcg tttccgcgtg ccatacggga
     5101 cactactgtg tgtttcagat aaaccgttgc atggcgagat taaacttccc ggccaggcta
     5161 accgttttta tgaaggcgct atttccgaac atctgcaaat tggcattcgg gcgatcgatt
     5221 tgctgcgcgc agaaggcgac cgactgcatt cgcgtaaatt acgaaccttt aatgagccgc
     5281 cgttccgata ataagttctg aaccttctta tcagaaatag atgtgaagga gtaagtaaga
     5341 cacctggcaa atagcctgca ataatcgtgg gctgtttgct tccttgggcg gatacgtgtt
     5401 ttattatcgt cttaatgatt tccacatatt aaaagcaagt atgctttcaa aacacaatta
     5461 taaaaaatcc cgccaacaat ataagttttt ataaaattaa atataagatt atggctttag
     5521 aatattttta tttctaatag acgagatttt tcctgttatg atataatatg ccgaattaac
     5581 acatgttaac gatttaccag taatgtaaat aaattttcga ggagatcatt ccagtgggac
     5641 gtaaatgggc caatattgtt gctaaaaaaa cggctaaaga cggtgcaacg tctaaaattt
     5701 atgcaaaatt cggtgtagaa atctatgctg ctgctaaaca aggtgaaccc gatccagaat
     5761 taaacacatc tttaaaattc gttattgaac gtgcaaagca ggcacaagtt ccaaagcacg
     5821 ttattgataa agcaattgat aaagccaaag gcggcggaga tgaaacgttc gtgcagggac
     5881 gttatgaagg ctttggtcct aatggctcaa tgattatcgc cgagacattg acttcaaatg
     5941 ttaaccgtac gattgctaac gttcgcacaa ttttcaataa aaaaggcggc aatatcggag
     6001 cggcaggttc tgtcagctat atgtttgaca atactggtgt gattgtattt aaaggatcag
     6061 accctgacca tatttttgaa attttacttg aagctgaagt tgatgttcgt gatgtgactg
     6121 aagaagaagg taacattgtt atttataccg aacctactga ccttcataaa ggaatcgcgg
     6181 ctctaaaagc agctggaatc actgagttct caacaacaga attagaaatg attgctcaat
     6241 ctgaagttga gctttcccca gaagatttag aaatctttga agggcttgtt gatgcccttg
     6301 aagatgacga cgatgtacaa aaagtttatc ataacgtcgc aaatctctaa ttatatatta
     6361 aagaaatctg tctttatggc agatttcttt aatctcatat aatccttata aaaaatataa
     6421 tgttcaactc gtcatattgc ttataaaaaa tcctcgttcc cagagaaata atatttatta
     6481 taattccagt tcttcttttt ctgattacag aaggcaaagt gacaattacg catagtttcc
     6541 cgataaagac gcgacagcta catcccgcat aaggcatttt tctctttatc cttgtacggt
     6601 acttcatgga acagagtttt tgaccttgcg aatcgtgatg tctgttgggg aggggcaatt
     6661 tgctcactga agcgtgagac tcgattaagc gcacgaaaca cagaaatcaa aaaacccggg
     6721 cactttttta caaggtaacc gggtaaaaat aatttttatt ttttaactgt tttgagactc
     6781 atagagatgt ctcaaaacta aaatttggct cctctgactg gacttgaacc agtgacatac
     6841 ggattaacag tccgccgttc taccgactga actacagagg aatcgtgaga acgaggcgaa
     6901 tattagcgat gcccacccac aatgtcaaag cctgttattt aaatttgaaa tcgtttgctg
     6961 aaataatctg cattttgtcg tttattccga cacaactggc tttttttcac acttttgcgg
     7021 ttcggatcga gggtatttcc acagccaacg tccagtaacc attcgccagt aaaacagcac
     7081 ggcccgcaca gcccagtcgg caaacattcc catccagaca ccaaccacac cccagccaag
     7141 catgatgccc agcacataac cgacgacaac ccggcaaccc cacatgctca acatagaaac
     7201 ccacatggcg taacgggcat cgcgagcacc tttaaatcca gcgggtagcc cccatgaggc
     7261 ggaccaaata ggcataaata aagcatttag ccaaatcaga atcacaacga catgtttaac
     7321 ctgtggatcc tgggtgtaaa acgatgccat aaccccggca aagggagccg ttagccaggc
     7381 gatggccgtt aatccaagag tggaaagcca gaacacatgc cgcaactgaa tctctgcttg
     7441 cgctatctgc cctaccccca accttcggcc tgtaatgatc gtagaagcag agccgagcgc
     7501 acttccgggt aagttgataa gagccgcaat tgaaaacgcg ataaaatttc cggcaataac
     7561 actggtcccc atcccggcaa cgaacatttg ggttaataac cgaccactgg taaataacac
     7621 tgattcgaca ctcgcgggaa taccaatccc catgacttcc cagataatgc taaaattcag
     7681 cggtttaaaa tagctcttta acgaaatcct tagcgcagga ttaaaaccaa tcgccagcac
     7741 ccacaaaatt gcaactgcgc caatataacg agaaatggtt aaacccagcc ctgccccgac
     7801 aaatcccagt cccggccagg agaaaaggcc gtaaatcaat atgccgctaa taataatatt
     7861 aagaatattc aggctaccgt taatcaatag cggtattttc gtattccctg caccacgaag
     7921 tgccccgcta ccaataagag tgatggcagc tgctggataa ctgagtaccg tcagctccag
     7981 ataagtcaac gccagtactt taacttctgt cgtggcatca cccgcgacga aatcaataat
     8041 ttgttcgcca aaatgatgaa taagcgttgc caacagtacg gcaaacaacg tcatgatcac
     8101 caatgactgc cgcgtcgcca ccctcgctcg tcgtcgatcc cgcttaccga gactaaatgc
     8161 cacaacgaca gtagtaccaa gatcgatagc agcaaaaaaa gccataatga ccatattgaa
     8221 gctgtccgcc aatcccacgc cggccatcgc atcttttccc agccagctga ccagaaaagt
     8281 gctcagaacc cccatcaaca ggacacaggc attctccatg aagataggaa cagcaagcgg
     8341 ggttatctcg cgccagaaca acactttgta gctcttgcgt ttagcgtgcc agcgagtgcc
     8401 gtgaacaacc tggcgtaaag cagaggagat attcaaagcc gaccttaatt gcagaaagtg
     8461 aaaccacatt tcaaataatg agggagaatc agcaaagctg caaagatttt cgccaacaaa
     8521 ttgtctgcaa atgcaacaaa ctgttgatag aaacggcaaa cagttgggga atttaaaaat
     8581 cgggtttgac aaaagatttt tcgccgttaa gatgtgcctc aacagcgatt cctctgtagt
     8641 tcagtcggta gaacggcgga ctgttaatcc gtatgtcact ggttcgagtc cagtcagagg
     8701 agccaaattc cgattcttac gctatcttat tagtccttat ttgatattga ttcaataagt
     8761 tagcgtgaaa atctttccag atgtgtattc agttttccct ccgcatccgg ttaatttggt
     8821 ggtcagattt gggggcaggt tggttcgatt ctggagtgac ccccaaatgt ctttaaacga
     8881 ttcaaaaatc cgtaacttaa aaccctcttc aaaacccgta aaactgtctg attcgcacgg
     8941 tctgtatctg ctggtcaatc agggcggttc gcgtatctgg tatctcaagt atcgcttcag
     9001 tggtaaagag tcccgcgtca gtctgggcgc atatcctctg gtttcacttg ctgaagcaag
     9061 acaacgacgt gacgatatcc gtaagctact gacgcagaat attaaccccg cccaccagcg
     9121 catgtctgat aaagccgcag cgtcaccgga aaagtatttt aaagccgtgg cgcttgcatg
     9181 gcacaaaacc aacaaaaaat ggtcgcctga ttatgccgcg cgcatcctcg ccagcatgga
     9241 aaatcatatc tttccggcga ttggtcatct gcctgtcact acgctgaaaa cgcagaattt
     9301 cactgcgtta ctgcgggtta ttgaggataa aggttttctg gaagtcgcgt cccgaacccg
     9361 gcagcaactc tgcaacatca tgcgttacgc cgtacagcag ggattcaccg aaaacaacct
     9421 ggcgcagcat ctggaaggcg tcaccgcgcc gccggttaag aatcactatc ccgccctgcc
     9481 gctggagcgg ttgcccgaat tgtttgagcg cattggcgac tatcagcagg gacggcagct
     9541 tacgaggctg gcggtggtgt tgactctcca cctgtttatc cgttccagcg agctgcgctt
     9601 tgcccgctgg ggtgagatag atttcagaaa caaaatctgg accatccccg ccacaaggga
     9661 agcgattgag aaagtccgtt tctctggccg tggcgcaaaa atgcgtactc catatatagt
     9721 gccgctttct cgtcaggcta tcgccattct gaagcagata aaggaaatct ccggccatct
     9781 ggaactggtg ttccccggcg accataaccc gtataagccg atgagcgaaa acactgtcaa
     9841 ccgggcgttg cgtcttatgg gctatgatac caaaactgat gtctgtgggc atggattccg
     9901 gacaatggcg tgtagcgcat tagtggaaac tgaactctgg tcacgggata ccgtggagcg
     9961 gcagatgagt catcaggagc gcaacagcgt tcgggcagcg tatatccacc gggctgaaca
    10021 tctcgacgcc cgtacagcca tgatgcagtg gtggtcggat tatctggatg taagtcgcga
    10081 ggggtacgtt gcgccgtata tttatgcgcg gcggcataag gcggcctgag acagtggcta
    10141 tataatttgt taaaaatgaa aaagcagatc ctgattgaat ccggatctgc tttttacatt
    10201 aggcaatcgc tgccagacaa tctgcaccag aaacgccata actgcaccag ttcagtacca
    10261 ccgcttacct gcgccagtct gccgtcgcct gtctgtgtca ggactgcgcc agatcttatc
    10321 gaataaacat caaactgcgc cagtgttacg gccctttcag ccctttggcc ttttccggtc
    10381 tggcgctgtt acccttagcc gccccttacc ctttccggcc tttttccttt gctggcgcaa
    10441 tcgccagaaa aatcgtcaag ctgcaccaga agcctgccaa taggtcatac cgttcagaag
    10501 catcgttatt gagaggaaac cgtacaaaaa atttctacgt agaaattttt tcggtggata
    10561 acgatgaata aagagtattt tataatgtga tggctatcaa aaatcgacca tccaaaaata
    10621 attcattgtt cattgattta taatgaataa ccatgaattt aatagtcgat gattattgtt
    10681 tttatcagta ttgataggaa agtatacaaa aaattttggc cccaaaattt tttgtacgaa
    10741 aaccgatgaa taacgcgaaa ttaataggaa accatccaaa attatttggg gcaaataatt
    10801 ttgcccgaaa accgatggat aactcgatct tttcaaagca acggctatca atcagtatcc
    10861 tttcttccgt aaacctgcgc cacataccgc ccgcgcccgt cgccgtgtcc caaatccatc
    10921 gccgtcattg ccagcgcttc tttctcactg aatccctgcg ccagataatg acgaatggca
    10981 tcctgcgccc acgcatagcg caacgagtgc ggggaatatg tgccagttaa cccgagacgt
    11041 gacgcctggc tgtgccagta tttcatcgcg cttttcaggt cgggtttatc tatcagcctg
    11101 ccgtggcgat cttctgccac aaccaacgca ttatccagcg cttttctgat agcgacagca
    11161 tccagaataa cggtttctcg cggacgcccg cctttggtgc cgaacaccac ggttaaacgg
    11221 ggctcacccc gctccagcga ttgcttccac gttcttaatg actgcgcact ttgcaccacc
    11281 tcctgcgaac gtaatcccat cagccttgag agttccagcg ccgctgccat
//
LOCUS       DADMJE010000138        11237 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.139, whole genome shotgun sequence.
ACCESSION   DADMJE010000138 DADMJE010000000
VERSION     DADMJE010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11237)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11237)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11237
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.139"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            63..662
                     /locus_tag="JN001_003203"
     CDS             63..662
                     /locus_tag="JN001_003203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000905087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY9054345.1"
                     /translation="MLIGYVRVSTNDQNTDLQRNALVCAGCEQIFEDKLSGTKTDRPG
                     LKRALKRLQKGDTLVVWKLDRLGRSMKHLISLVGELRERGINFRSLTDSIDTSSPMGR
                     FFFHVMGALAEMERELIVERTLAGLAAARARGRTGGRRPKLTKEQHEQIARLIKNGHD
                     RKQLAIIYGIGTSTIYRYHPVGDIQTEETTGQTQENENR"
     gene            complement(691..1179)
                     /locus_tag="JN001_003204"
     CDS             complement(691..1179)
                     /locus_tag="JN001_003204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001761054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054346.1"
                     /translation="MMMIYGMFVFELRTLPHQQLQQNKSWRHVKNERVNRSASWQYIG
                     AGDDRIVLSGVLYPEITGGEVSLSLLTTQAYTGRPWPLIDGVGQIYGMYVLTETNTTR
                     SEFDRYGKAKKIEFSLTLERCDEDLRERLQSSSFSDMLSGFKDKVTSSLNSAASSVKG
                     LF"
     gene            complement(1192..3999)
                     /locus_tag="JN001_003205"
     CDS             complement(1192..3999)
                     /locus_tag="JN001_003205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000853438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HAY9054347.1"
                     /translation="MKTLDIRVAFSAVDRLTRPAENARRLMGQFGDSIQRTQGAIKNL
                     ERQARSFERARDAVSKADAGIVKARRQLNALNQLQRTGTVLSEKQQKLMQQLSTRLER
                     LNESRTREIQKMRELGGELKRHGISLTGSDNTIQQAIRRTEQYNNQLERERQALARVT
                     RARERYSRAQETAGKLKTGGALAIGAAAAGGYAAGRFLQPAIGFGKEMSRVQALTRID
                     QNSPQFKALREQALKLGSETQFTAGDAASGQAFLAMAGFTPQAIQAALPGVLSMATAG
                     GMDLGETADIGSNILTQFGLSADQMDRVGDTLTAAFTRTNTDLRALGETMKYAGPVAG
                     KLGISLEQAAAMAGVLANMGIRGSDAGTAMRASLARLASPPKAAAEALKELGVSVSDA
                     GGKMRPMEDVLADLYKATRKYGEVDRVSFFKDIAGEEAFTSFMALVDAAGDGSLPKLR
                     KELEGARGEAERTAKVMANNLDGDLKSLSSAWEGLRIRIADLIDGPLRSVTQWLTRVV
                     SKVTALAQAHPALTRQLLIAGGALLAMTATVGSLSLAIGVLAGPLAKLRLGFSLLTGS
                     MNAVRVLPALWGMVTGSVSLLGGAIGALFSPVGLIVAALAGAAVLIWKYWDPIRAFFA
                     GVFSGIMERLTPLRETFERFGPVFDAIGSGISQVFNWFKSLLSPMESSKETLDKCTSA
                     GEIFGNVLGGALQLVLTPAKMLLDTLAWILEKLGVLPDEAERARKKIEDAQRAAILQD
                     KVALLQGDLAKINPPKPVENGNGTGGDNPKDNKPLTDSNTGTLRRLSKIADNTGKLVE
                     ETKKRIGPGDIVFKNLPRALAVRGEWQERKIAQVSKPAPAINITPVVPAPLPPALVPV
                     VAASSRPVAEAIRSPVASVPVTSRNREPVAFGFGGEIHVHLHNVVTQNPRELAKLVGE
                     MVRAEMERRARAGRGCFYDKD"
     gene            complement(4037..4141)
                     /locus_tag="JN001_003206"
     CDS             complement(4037..4141)
                     /locus_tag="JN001_003206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000333494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GpE family phage tail protein"
                     /protein_id="HAY9054348.1"
                     /translation="MCFEHIEDLVADIAAIFNWSPAEIFMMTPGEVVS"
     gene            complement(4150..4524)
                     /locus_tag="JN001_003207"
     CDS             complement(4150..4524)
                     /locus_tag="JN001_003207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000651574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9054349.1"
                     /translation="MKDIDTETRNNTVADNVTAVEDMAVERGVKLTRPIERGGEKITY
                     VEITGAIEQAGSLRGLSLSDVLNLKADTMFTLLPRVTSPRLDEVMIKKMSSRDFIQLC
                     AVAVNFMSEPDSGAKSVQETAA"
     gene            complement(4580..5090)
                     /locus_tag="JN001_003208"
                     /pseudo
     CDS             complement(4580..5090)
                     /locus_tag="JN001_003208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310671.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail tube protein"
     gene            complement(5090..6274)
                     /locus_tag="JN001_003209"
     CDS             complement(5090..6274)
                     /locus_tag="JN001_003209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail sheath family protein"
                     /protein_id="HAY9054350.1"
                     /translation="MSETRFHGARVTENTDLVTAINDVDSSVIGIVATADDADAKLFP
                     LNKPTLLTRVNDVLGKCGTTGTLYRALKAIADQVSTKVIVVRVAEHKEEDGKTQDQLV
                     IGGSEDDGSYTGMYALLVAEQDESIGYRPRILAAPELDTEAVTKSLCVIADKLRAFVY
                     ASCHGCNTMAEAITYRQKFNEREVMLLWPDFIAYNPKNGKNETFPAPAYACGLRAYID
                     HEQGWHKSLSNVPVKNVLGMSRHVFWSLQAEDSDANSLNNKEITTIIRRNGFRFWGNR
                     TPETNAYIFEVYTRTAQVLADSIAEAQFETIDSPLTPANVKDVISAIRAKLDSLVTAG
                     KLIGAECWYDVVDNSTTDLRQGRVRIRYKYTPVPPLEDMELYQTFTDEYFEPAFAVLG
                     GA"
     gene            6432..7541
                     /locus_tag="JN001_003210"
                     /pseudo
     CDS             6432..7541
                     /locus_tag="JN001_003210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494339.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage late control D family protein"
     gene            7790..10909
                     /locus_tag="JN001_003211"
     CDS             7790..10909
                     /locus_tag="JN001_003211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000580159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054351.1"
                     /translation="MIGQFLSATEILAKNYVRNKMVKNPFYSNLKWNFIEKNIIRLTS
                     SPVKSVLCISAFSFVLLYVGYLNELFIKNNLLHYFPFRHSLTEWQTTILSGQLTIIGI
                     VYPLVIGLVSVLFQKKADRKIAQTAYQRYSGFMLAGLSGLFLSGFILLSVLIKTVFGS
                     YLYGIACLISILWLLINIVLSIWFFIVSLEILDDVKRQIIIKRYIAFEIVMPHICNKI
                     SAKLRLYPIYQKHNYSNLEITQADYKGEYISVASSYSKEDELSLYHRPFQLTLNLINY
                     QLKKKNHFASFVIGDNRTKETESTGKILFSVKNIKPDSLLIKILKQCFYRAPIKGGDF
                     SVSLTMQAITADTYMYLRDSDLISFDNAISALINNFNNLCDLYFFQDDNTNNNFLLIT
                     TELFERSFQYEFSDEVYKISNNSMDKINLSERFFELCLWSGVRIINNRKHLISNELCI
                     YMGITRSQWSILTEWFRNNQSLLNASLRSRYNRILRTYITVWEQYQESINFRFCNTEN
                     SDLFELFCKTQLQELPSMIIDATQTRDPSTIDTAVDLINRWQHSMNIDSHSVEKYSYK
                     GQLFNPGFFISKKLNFNSDREWFNIAIINALTDMRICTCLYLTSRINTSDKLMTHYIK
                     LILEGKLIDQTGGYETPTEEIDNASQLIKILIRICLWTWSENMEHNGWMNSLARRLRD
                     YDKTDMVMGRVYSNVFDCGFIDMEQSWVQLLLIFSKKNDSVSKEIKEAIENNYITYRE
                     KQRLIGVLSKICNSIEYTKIKLTLTLDDLQTKKENLRKLLQEHINMLKKDLDMRLQDA
                     AIDVHRLDSTARKTSEHLRKRIKKTLPLSLFKSIDFKQASDCFTKHKISIKIDKEPYA
                     EGIESIPYINEGDIQADLILKDIQRIILSNLFSTGCSQHTVIEDFNMLIDHIKSSADL
                     AGKLVLVMSKEIFQQYNRMLFDNPNLRELMRKNDDGSMNITTESGTRKVYFLPFVNQP
                     FSLVVKDNYFTKLIIREYDNNKLVNVTSENIKSDSDKFKLTLNYELNIVFEGNADLKI
                     AHSQRVTSE"
     gene            11045..>11237
                     /locus_tag="JN001_003212"
     CDS             11045..>11237
                     /locus_tag="JN001_003212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001512982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ogr/Delta-like zinc finger family protein"
                     /protein_id="HAY9054352.1"
                     /translation="MFRCPLCGASARIRTSRPENDSNTVRQKYYQCNNLECGVCFSTL
                     EAFHKFTSKHASPIHSSEGI"
BASE COUNT         3076 a         2817 c         2516 g         2828 t
ORIGIN      
        1 ttaaataatg gccgtttctg gcctgcatgg catgatttgc gcttttggac gggagattca
       61 gtgtgctgat tggctatgta agggtatcaa caaatgacca gaatacagac ctgcaacgaa
      121 acgctcttgt ttgtgcagga tgtgaacaaa tatttgaaga taaattaagc gggacaaaga
      181 cagaccgacc gggattaaaa cgcgctttaa agcgccttca aaaaggtgac acgctggttg
      241 tctggaaact ggatcgcctc gggcgaagca tgaaacatct gatttctctc gtcggggaac
      301 tacgggagcg agggattaat tttcgcagtc tgaccgacag catagacaca tcttctccaa
      361 tggggcgttt tttcttccac gtgatgggtg ccctggctga aatggaacgt gaattaattg
      421 ttgaacgtac actggccggg ctggcggcag cgcgcgcaag ggggcgcaca ggcggacgtc
      481 gaccgaagct gacaaaagaa cagcatgagc aaatagcaag gctaatcaaa aacgggcacg
      541 acagaaaaca actggcaata atttacggca ttggcacatc gacgatttat cgttatcacc
      601 ctgtaggcga tatacagact gaagaaacaa ccgggcagac tcaggaaaat gaaaaccgct
      661 aatctgacca ttagcggttt ttgtgttaaa tcagaacagc cctttaactg aactggccgc
      721 gctgttaaga gatgatgtca ccttatcttt gaagccggac agcatatcac tgaacgatga
      781 ggattgcagg cgctcccgca aatcctcatc acagcgttca agagtcagtg aaaattctat
      841 ctttttcgcc ttaccgtagc gatcaaactc ggagcgggtc gtattcgttt cagtcaggac
      901 atacatgccg taaatctgcc cgacgccatc aatcaaaggc cagggtcgtc ctgtatacgc
      961 ctgcgtagtc agcagcgaca gcgacacttc gccacctgta atttcaggat aaagcacacc
     1021 agaaagaacg atgcgatcat cacctgcacc gatatactgc cagcttgctg aacggttaac
     1081 gcgttcattt ttcacatgcc gccagctttt gttttgctgt aactgctgat gcggcagcgt
     1141 gcgcagctca aaaacaaaca tgccgtagat catcatcatg gccatgactc ctcaatcttt
     1201 atcgtaaaaa cagccacgcc cggcacgggc gcgccgttcc atttctgccc tgaccatttc
     1261 accgaccagt ttcgccagtt cgcggggatt ctgcgtaaca acgttatgca gatgaacatg
     1321 aatttcacca ccaaatccga aggcaacagg ctcccggtta cgggaagtta caggaactga
     1381 tgccactgga gatcgtatag cctccgccac cgggcgggag ctggccgcaa caacagggac
     1441 cagcgccgga ggcagcggag ccggaaccac gggtgtgata ttaattgcgg gggcaggctt
     1501 actgacctgc gcaatcttcc gctcctgcca ctccccacga acagcaagtg ctcggggcag
     1561 gtttttaaag acaatatcgc cggggccaat gcgttttttc gtctcctcaa ccagcttacc
     1621 tgtgttatca gcaattttgc tgagtctgcg cagcgtaccg gtattgctgt ctgtgagcgg
     1681 tttattgtct ttggggttat cacctccggt gccattgcca ttttccacag gcttcggcgg
     1741 attgattttc gccagatccc cctgaagcaa ggcaaccttg tcctgaagaa tggccgcacg
     1801 ctgtgcgtct tcgattttct tgcgcgccct ttccgcttca tccggaagca caccaagctt
     1861 ttcaagtatc cacgccagcg tatccagcaa catttttgca ggtgtcagaa caagttgtaa
     1921 cgcaccgcca agaacgttac cgaatatctc gccagcactg gtacatttat ccagagtttc
     1981 cttgctggac tccatcggtg acagcagcga tttaaaccag ttaaacacct ggctgatccc
     2041 actcccgatt gcgtcaaaaa caggaccaaa ccgttcaaag gtttcgcgca acggggtcag
     2101 cctttccata atcccgctga acaccccggc aaaaaatgcc ctgatgggat cccagtattt
     2161 ccagataaga acggcagctc cggcaagcgc agccacgata agaccaaccg gactgaacaa
     2221 cgccccgata gcgcctccca gtaaagaaac ggaacccgtc accattcccc atagtgctgg
     2281 cagaaccctg acagcattca ttgatccggt caggagggaa aaaccaagac gcagttttgc
     2341 cagcgggcca gcaagcacac caatagccag cgacaacgag ccaaccgttg cagtcattgc
     2401 cagcaatgca ccgcctgcaa tcagtagctg gcgcgtcagt gcgggatggg cctgcgccag
     2461 cgccgtcacc tttgatacca cacgcgtgag ccactgcgtg acagaacgca gcggaccgtc
     2521 aatcagatct gcaatgcgga tgcgcaaccc ttcccatgca ctgctgagtg atttcagatc
     2581 gccgtcaagg ttgttggcca taacctttgc cgtgcgttca gcctcaccgc gcgcgccttc
     2641 aagttctttt ctcagtttgg gtaaggagcc gtcacctgcc gcatcaacga gggccataaa
     2701 tgatgtgaaa gcctcttctc cggcaatgtc cttaaagaac gatacccggt caacttcccc
     2761 gtatttgcgg gtagctttat aaaggtcagc cagcacatcc tccatcgggc gcattttgcc
     2821 cccggcatcc gagacagaca cgccaagctc tttcagcgcc tctgctgccg cctttggcgg
     2881 tgatgccaga cgagccaggc tggcacgcat tgccgtacca gcatcactcc ccctgatacc
     2941 catattcgcc agcacgcccg ccatcgctgc ggcctgctcc agagatattc ccagcttacc
     3001 cgccaccgga cctgcatatt tcatggtttc acccagtgcg cgaaggtcag tgttggtacg
     3061 ggtaaacgct gcggtgagtg tgtcgccgac ccggtccatc tggtcagcag aaagaccgaa
     3121 ctgcgtcaga atatttgagc caatatccgc cgtctcaccg aggtccatac cgccagccgt
     3181 tgccatgctc agtacgccag ggagcgcagc ctgaatggcc tgtggtgtaa agccagccat
     3241 tgcaagaaat gcctgtccac tggcggcatc gcctgcggtg aactgcgttt cagagccaag
     3301 ttttaacgcc tgctcacgca gcgccttaaa ctgcgggctg ttctggtcga ttcgcgtcag
     3361 tgcctgaacg cgggacatct ctttgccgaa cccgatcgca ggctgcaaaa aacgcccggc
     3421 agcatagccg cccgccgctg ccgcaccaat tgccagcgca ccacctgttt tcagttttcc
     3481 cgctgtttcc tgcgcgcgcg aataccgctc acgcgcccgt gttacacgcg caagcgcctg
     3541 ccgttcgcgt tcaagctggt tgttgtactg ttcggtgcgt ctgatggcct gctggatggt
     3601 gttatcgctg cctgtcaggg aaatgccgtg gcgtttcagc tctccgccaa gctcccgcat
     3661 tttctgaatt tcccgtgtgc gcgattcatt caggcgttca agccgggtgc ttaactgctg
     3721 catcagcttt tgttgttttt cgctgagcac tgtacccgtg cgttgtaact gattaagggc
     3781 gttaagctgg cgtcgtgctt tcacgatgcc agcatccgct ttactgacag cgtcacgggc
     3841 gcgctcaaat gatcgcgcct gacgctcgag atttttgatc gccccctgcg ttcgctggat
     3901 ggagtcacca aactgcccca tcaggcggcg ggcgttttcg gcaggccggg tcagcctgtc
     3961 aacggcgctg aaagcgaccc ggatatcaag agtcttcatt gtctgcattc ccgctacgaa
     4021 gtgccgcccg ctcacgtcag ctaaccactt cgccgggcgt catcatgaag atttcggcgg
     4081 gcgaccagtt aaaaatggcg gcaatatccg ccaccagatc ttcgatgtgc tcaaagcaca
     4141 ccagggtgat tacgctgccg tctcctgcac gctcttcgcg ccagagtctg gctcgctcat
     4201 aaaatttaca gccacagcgc acaactgaat aaaatcgcgt gacgacattt ttttaatcat
     4261 cacttcatcc agtcgtggcg aggtcacgcg aggcaacagc gtgaacatgg tatccgcttt
     4321 cagattcagc acatcagaca gcgacagacc acgcagggat ccagcctgct caatagcccc
     4381 ggtgatctcc acatacgtga ttttttcgcc accacgctca attggtcggg tcagttttac
     4441 gccacgttcg acagccatat cctcaactgc cgtcacatta tccgccacgg tgttattccg
     4501 ggtttcagta tcgatgtctt tcatctgttg tctccttttc agtcagaggc gacgcactgc
     4561 gccgccagca tattacttat cagccaagcc caagcgcgga acggatgcga tcgggcacaa
     4621 tgtccttgcc gtccttccgg taaatgaagt tcagcaggtc aatctcccac aacgggcgat
     4681 cgttaacact cagcttgtag taggtgtttt aatggcgtaa gtgtgtgatg tggcttcgcc
     4741 ctgtttggct tcccccatat caatttccgt cacacgtccg cgcatttcga cttcatacag
     4801 gtcgctttct gcatcggtgt agtattcacc cgcaaaacgc agcagcgtgc cgtcaatcgt
     4861 gccgccatac ttaaggaaca gctcacgaac tgcgccccca tgacaaagct cgcatcaagc
     4921 gcggagtcgt ccagaccgag atcaatactt accgcaccca tcatgccacc accccggtag
     4981 ctgtcggttt tgcgcgtcag cttaggcaga gtgacggacg tcacattacc cacttcgttt
     5041 tcaccatcca caaacagcgt aaaaaagcga agatgttttg gcacagccat caggcacctc
     5101 ccagcaccgc aaatgcgggt tcaaagtatt catcagtaaa cgtctggtaa agctccatgt
     5161 cttccagtgg cggaacgggc gtatatttgt agcgaatacg cacacgtccc tgacgtaaat
     5221 ccgtggtgct gttatccacc acgtcatacc agcactccgc gccaatcagt ttcccggcag
     5281 tcaccagtga atccagtttt gccctgatgg cactgataac atccttcaca ttcgcaggcg
     5341 tcagtggact gtcgatggtt tcaaactgcg cttccgcaat tgaatcagcc agcacctgtg
     5401 cggttcgggt atacacctca aagatgtagg cgttcgtttc cggtgtgcgg ttaccccaga
     5461 agcggaaccc gttgcgacga ataatggtcg tgatttcttt gttgttgagg ctgttggcat
     5521 cgctgtcttc ggcctgcaac gaccagaaca catgcctcga catccccagc acatttttaa
     5581 ccggaacgtt ggacagcgat ttgtgccatc cctgttcatg gtcaatgtac gcacgaaggc
     5641 cgcacgcata ggcaggcgcg gggaacgttt cgtttttgcc atttttcggg ttgtaggcga
     5701 tgaagtccgg ccataagagc atcacctcac gttcgttgaa tttctggcgg taggtaattg
     5761 cctcggccat cgtgttacag ccatgacatg aggcatacac aaacgcgcgc agtttatctg
     5821 caatcacgca cagggatttt gttaccgcct ccgtgtccag ctccggcgcg gccagaatac
     5881 gcggacggta tccgatgctt tcatcctgct ctgcaacaag cagcgcatac atccccgtat
     5941 agctgccgtc atcctcagaa ccaccgataa ccagttgatc ctgcgtcttt ccgtcttctt
     6001 ctttgtgttc agccacgcga acgacgatca cctttgtgct cacctggtct gcgatggcct
     6061 taagcgcacg ataaagcgtc cccgttgtcc cgcattttcc cagcacgtca ttgacgcggg
     6121 tcagcagtgt gggcttgttc agcgggaaca gcttcgcgtc cgcatcatcc gccgttgcca
     6181 cgataccgat aacgctggaa tcaacatcgt taatcgctgt taccaggtcg gtattctccg
     6241 taacacgggc accatgaaaa cgagtttcac tcatagcttc agccccttgt atccgttaaa
     6301 tgattcagca acaatcatca cccaccacgc gcgtaatctc acccctgcgc cgttctcccg
     6361 ccacggcgac aacaaaaagc agtaaccccc tccgcacgca catgcgacca tgccgcacag
     6421 ggagggagca gatgaccgac accaccatgc aattgctcag tcagggcacg gcccccgtga
     6481 aaatgccgga ttttgatatt ctctcggagg gtaaaacgct gtcaggcgtg gcggagcgcc
     6541 tgatgagcct gtaactgacc gacaaccggg gatttgaggc ggaccagctc accatcacgc
     6601 tggatgatgc ggatggtcag ttgcagctac cgccacgggg cgcgcgtctg acggttctca
     6661 ttggctggaa aggggaaccg ctgacagaaa aaggcactta cattgttgat gaaatcgctc
     6721 acgaaggacc gccggacagg ctgactgttt cagccagaag cgcagatttt cgggatgaat
     6781 ttaacgttaa acgtgaggtg tcctggcatg atgtgaccgt tgagcgtgtg gtatccgcca
     6841 tcactcatcg gtacggtctg aaaccgcaaa tcagcgaaat gctgatggat atcgaaatcg
     6901 accacgccga ccagaccgaa gaaagcgaca tgtcctttct tacgcgcatg gcggaaatgc
     6961 tgggagcaat cgccacggta aaaagcggca atctgttatt catcatgcca ggtggtggcg
     7021 tgaacgcaca ggggcagccg ttgccctcgt tcgccattac acgcagcagc ggcgatcgcc
     7081 atcagttccg cattgctgac cgcgaggcgt atacgggggt acgcgcctac tggcttgatc
     7141 ttaattacgg gaaaaagaaa aaagtcagcg tgaaacgccg caaaccgcca aaacccaaaa
     7201 aggagaaaag cagcagtcgg gaaggcgact atatggaagg tgcggaaggc aacgtgtttg
     7261 tgttacgcaa gacttatcag aacgagcagg cagcaagacg cgcagcggcg gcaaagtggc
     7321 agcagctaca acgcggagcc gcatcattct ccatcacgct ggcgcgtggt cgtgcagaac
     7381 tctatcccga aatgcatggc acagtgacag gctttaaaag cgagattgat tatcaggact
     7441 ggactattgc aaaagccgag cacaccattg ataacagcgg ctttaccacg cagcttgaac
     7501 ttgaagcaaa aatcccggaa tggatagcag aaacagaata aatctcttaa aaatattatt
     7561 tttgagatgt gcttctacac tgacagtaag aacaaaagat aatgtatcag cccactagat
     7621 gtcagaggtt ggggcatcaa ccagatgcta acaataatac ggatgttttt cccacatgac
     7681 agaggaagtc aagtataatc ttcacagtcc atcccgtcca agggaatatg actcaatagt
     7741 aaaagttcca gtttagttag tagacccaca ctttatagaa gagtaattca tgattggaca
     7801 atttttaagt gcaacagaga ttttagcaaa gaactatgtt cgtaataaaa tggttaaaaa
     7861 tccattttat tcgaatttaa aatggaattt tattgaaaaa aacatcataa gattaacatc
     7921 ctcaccggtt aaatcagtac tttgcatatc agctttttca tttgtactac tttatgttgg
     7981 atatttaaac gaattattta taaaaaataa tcttttacat tatttcccgt ttaggcattc
     8041 attaaccgaa tggcaaacaa ccattttaag tggccaattg acaattattg gtattgtata
     8101 cccccttgtt ataggtttag taagtgtctt attccaaaaa aaggcagata gaaaaatagc
     8161 ccaaactgct tatcagcgtt actcaggatt catgcttgct ggactcagcg ggcttttctt
     8221 atcaggattt atacttctca gtgtactaat taaaactgtc tttggaagtt atctttatgg
     8281 tatagcttgt ctaatcagca tattatggct tttgataaac atagttcttt ctatttggtt
     8341 ctttatcgtg agtcttgaaa ttcttgatga tgtaaaacgg caaataatta taaagcgata
     8401 cattgccttc gaaatagtaa tgccccatat ttgtaacaaa atctcagcca agcttaggtt
     8461 ataccctatc tatcaaaaac ataactattc aaatttagaa atcacgcaag ccgattacaa
     8521 aggagaatac atatctgtgg ctagcagtta ttctaaggaa gatgagttaa gtttatatca
     8581 ccgtcctttt caacttactc ttaatcttat taattaccaa ctaaaaaaga agaatcattt
     8641 tgcgtcattt gtcattggtg ataatcgtac aaaagaaaca gaatccacgg gtaagatact
     8701 ttttagcgtt aaaaatatca aaccagacag cttattaata aaaatactta agcaatgttt
     8761 ttatagggct ccgattaaag gaggagattt ttccgtaagt cttacaatgc aggctataac
     8821 agcagatacg tatatgtatc tgcgggattc tgatctcatt agttttgaca atgctatctc
     8881 tgcattaatt aataacttta ataatctctg cgatttgtat ttttttcaag atgataatac
     8941 caacaataac ttcttactga tcactacaga attatttgaa cggagttttc aatatgagtt
     9001 ttcagatgaa gtttataaaa tatcaaataa ttccatggat aaaattaatc tttctgaaag
     9061 attttttgaa ttatgtcttt ggagcggagt gcgtattatc aataatagaa aacatcttat
     9121 cagcaatgaa ctttgtatct atatgggaat tactcgttca caatggtcaa tattaacaga
     9181 atggttccga aacaaccaat cactcttaaa tgcctcgctt cgttcacgtt ataatcgtat
     9241 attaagaacc tatatcactg tttgggagca atatcaagaa agcataaact ttcgtttctg
     9301 caatacagag aattcagatt tatttgaatt attttgcaaa acgcaactac aagaacttcc
     9361 atcgatgatt attgatgcaa cacagactcg cgatccttct actattgata cagccgtcga
     9421 tcttattaac cgatggcagc actcaatgaa tattgacagc cattcggtag aaaaatacag
     9481 ttacaaaggc cagcttttta acccgggttt tttcatatcc aaaaaactaa acttcaattc
     9541 agacagagag tggttcaata ttgccatcat aaatgcgttg actgacatgc gtatatgcac
     9601 atgtctttat ctgacatcaa gaatcaatac ttctgacaaa ctaatgacac attacattaa
     9661 acttatttta gagggtaaac ttattgacca aaccggtgga tatgaaactc ccactgaaga
     9721 aattgataat gcaagccaac taatcaagat attaattaga atctgcctgt ggacatggtc
     9781 tgaaaatatg gagcacaatg ggtggatgaa tagtttagca aggcgtttac gtgactatga
     9841 taaaacagac atggtgatgg gcagagttta cagtaatgtt tttgactgtg gatttattga
     9901 tatggaacaa tcatgggttc agctattatt aattttttct aaaaagaacg atagcgtatc
     9961 aaaagaaata aaagaagcaa tagaaaacaa ctatataaca tatcgtgaga agcaacgact
    10021 cattggagta ttatcaaaaa tttgtaactc catcgaatac actaaaatca agctgacttt
    10081 aacattggac gatctccaaa caaaaaaaga aaacttaaga aagttgcttc aagagcatat
    10141 taacatgcta aagaaagatc ttgatatgag acttcaggat gctgccatag atgtacatcg
    10201 actagatagc actgcacgta aaacatcaga acatcttcgt aaacgcatca agaaaacgct
    10261 ccctctttca cttttcaaat ctattgattt taagcaggct agcgattgtt tcacaaaaca
    10321 taagatatct attaagatag ataaagaacc gtatgccgaa ggaatagaat ccatccctta
    10381 tatcaatgaa ggtgatattc aagcagactt aattctcaag gacatccaga gaataatact
    10441 ttcaaattta tttagcactg gctgttcgca acataccgta atagaagatt tcaatatgtt
    10501 gattgatcac ataaaatcat ctgctgactt ggctggcaaa ctggttcttg tgatgagtaa
    10561 agagatcttt cagcaatata atcgtatgct tttcgataat cccaacctca gagaactaat
    10621 gagaaaaaat gatgatggct ctatgaacat aactactgaa tccggtaccc gtaaggttta
    10681 cttcttacca tttgttaatc aaccattttc tcttgtggta aaggataact acttcactaa
    10741 attaattatt agagaatatg ataataataa gttagtaaat gtcacttcag agaatatcaa
    10801 aagtgactca gataaattca agctaactct taactatgag ttgaatatag tatttgaagg
    10861 aaacgctgat ttaaaaatag ctcactcgca aagagtgaca tcagaataat atctttgacg
    10921 gcgctcctta gagtgccgtt cgtttattaa ctaatgctaa aaatcattat atagagaaag
    10981 tcatgtttaa atcttagaga atacaaccta gaatagtgta agcactacaa taagagaggt
    11041 cgctatgttc cgttgtccgc tttgtggcgc atctgcccgt atccgcacca gtcgtccgga
    11101 aaatgattca aacaccgtga gacaaaagta ttatcagtgt aacaatctag aatgcggcgt
    11161 atgtttctca acactggaag ccttccacaa attcacttca aagcacgcct cccccattca
    11221 ctcatcagag ggcatcc
//
LOCUS       DADMJE010000139        11009 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.142, whole genome shotgun sequence.
ACCESSION   DADMJE010000139 DADMJE010000000
VERSION     DADMJE010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.142"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..121)
                     /locus_tag="JN001_003213"
                     /pseudo
     CDS             complement(1..121)
                     /locus_tag="JN001_003213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858395.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            398..1273
                     /locus_tag="JN001_003214"
     CDS             398..1273
                     /locus_tag="JN001_003214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001224622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-regulated protein"
                     /protein_id="HAY9054353.1"
                     /translation="MRKFILISMITLASVSLGACRQNATIKQDAPGQKAFLIDGQIYD
                     LHSGKIISSSELLADLATARHLIIGEKHDNAEHHQIELWLIQNLLIQRPQGSVLLEML
                     TSDQQPRVNQVKCWLKDNPVVRDSRVQELLNWQKGWSWEMYGDIVMQLLRGPYPLLNA
                     NIGREQMLALYKKNEFPKGKKSTAPVVQEALRETIIAMHEGNLESQQLTSMLSVQQQR
                     DRYMARQLLSAPVPSLLIAGGYHASKNMGVPLHMEDLATGTHPVVLMLAEKGMNITVD
                     HADYVWFVAPDTTKR"
     gene            1281..2057
                     /locus_tag="JN001_003215"
     CDS             1281..2057
                     /locus_tag="JN001_003215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004095468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy transducer TonB"
                     /protein_id="HAY9054354.1"
                     /translation="MMNILHFPQSVKWSSWFICSLLLHGLIFLTFIWRFSEVQPAMSP
                     APAIMLQWAEIIEAPSSPLSLPVGIAQQESAVTEEKQQTEDRQQRPVTEDSDATIEIT
                     RKKKSSDGEKKKTRPPRKIKAQTSDSNPTAVSSNAAPQALVESSRIAAPFNSDSTKRD
                     NSEASWESRVKGHLNRYKRYPGDARKRARTGTAVVTFTVNTEGTIVSSFLEISSGTLS
                     LDREAIAVLERAQPLPKPPPEILEGGLFKVKMPITFKLKE"
     gene            2226..4487
                     /locus_tag="JN001_003216"
     CDS             2226..4487
                     /locus_tag="JN001_003216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016536327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY9054355.1"
                     /translation="MNVIKLAIGSGILLLSCGAYSQSISEKTNSDKKGAAEFSPLSVS
                     VGKTTSEQEALEKTGATSSRTTDKNLQSLDATVRSMPGTYTQIDPGQGAISVNIRGMS
                     GFGRVNTMVDGITQSFYGTSTSGTTAHGSTNNMAGVLIDPNLLVAVDVTRGDSSGSEG
                     INALAGSANMRTIGVDDVIFNGNTYGLRSRFSVGSNGLGRSGMIALGGKSDAFTDTGS
                     IGVMAAVSGSSVYSNFSNGSGINSKEFGYDKYMKQNPKSQLYKMDIRPDEFNSFELSA
                     RTYENKFTRRDITSDDYYIKYHYTPFSELIDFNVTASTSRGNQKYRDGSLYTFYKTSA
                     QNRSDALDINNTSRFTVADNELEFMLGSKLMRTRYDRTIHSAAGDPKANQESIENNPF
                     APSGQQDISALYTGLKVTRGIWEADFNLNYTRNRITGYKPACDSRVICVPQGSYDIDD
                     KEGGFNPSVQLSAQVTPWLQPFIGYSKSMRAPNIQEMFFSNSGGASMNPFLKPERAET
                     WQAGFNIDTRDLLVEQDALRFKALAYRSRIQNYIYSESYLVCSGGRKCSMAEVIGNDW
                     EGISDEYSDNMYIYVNSASDVIAKGFELEMDYDAGFAFGRLSFSQQQTDQPTSIASTY
                     FGAGDMTELPRKYMTLDTGVRFFDNALTLGTIIKYTGKARRLSPDFEQDEHTGAIIKQ
                     DLPQIPTIIDLYGTYEYNRNLTLKLSVQNLMNRDYSEALNKLNMMPGLGDESHPANSA
                     RGRTWIFGGDIRF"
     gene            4556..5731
                     /gene="senB"
                     /locus_tag="JN001_003217"
     CDS             4556..5731
                     /gene="senB"
                     /locus_tag="JN001_003217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001020413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enterotoxin production-related protein TieB"
                     /protein_id="HAY9054356.1"
                     /translation="MNIFTLSKAPLYLLISLFLPTMAMAIDPPERELSRFALKTNYLQ
                     SPDEGVYELAFDNASKKVFAAVTDRVNREANKGYLYSFNSDSLKVENKYTMPYRAFSL
                     AINQDKHQLYIGHTQSASLRISMFDTPTGKLVRTSDRLSFKAANAADSRFEHLRHMVY
                     SQDSDTLFVSYSNMLKTAEGMKPLHKLLMLDGTTLALKGEVKDAYKGTAYGLTMDEKT
                     QKIYVGGRDYINEIDAKNQTLLRTIPLKDPRPQITSVQNLAVDSASDRAFVVVFDHDD
                     RSGTKDGLYIFDLRDGKQLGYVHTGAGANAVKYNPKYNELYVTNFTSGTISVVDATKY
                     SITREFNMPVYPNQMVLSDDMDTLYIGIKEGFNRDWDPDVFVEGAKERILSIDLKKS"
     gene            complement(6104..6292)
                     /locus_tag="JN001_003218"
                     /pseudo
     CDS             complement(6104..6292)
                     /locus_tag="JN001_003218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000198547.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            6256..6540
                     /locus_tag="JN001_003219"
     CDS             6256..6540
                     /locus_tag="JN001_003219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HAY9054357.1"
                     /translation="MHSTLSPLVPVYPVFITVIADHDKPQPSGCLLESQGSLCPICRQ
                     RITHETGWNVHHKVKKVMGGGEELSNLVLLHPNCHRQLHSCEAGSLKKGL"
     gene            6683..6904
                     /locus_tag="JN001_003220"
                     /pseudo
     CDS             6683..6904
                     /locus_tag="JN001_003220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(6925..6987)
                     /locus_tag="JN001_003221"
                     /pseudo
     CDS             complement(6925..6987)
                     /locus_tag="JN001_003221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
     gene            7438..8850
                     /gene="ospC1"
                     /locus_tag="JN001_003222"
     CDS             7438..8850
                     /gene="ospC1"
                     /locus_tag="JN001_003222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC1"
                     /protein_id="HAY9054358.1"
                     /translation="MNISETLNSANTQCNIDSMDNRLHTLFPKVTSVRNAAQQTMPDE
                     KNLKDSANIIKDFFRKTIAAQSYSRMFSQGSNFKSLNIAIDAPSDAKASFKAIEHLDR
                     LSKHYISEIREKLHPLSAEELNLLSLIINSDLIFRHQSNSDLSDKILNIKSFNKIQSE
                     GICTKRNTYADDIKKIANHDFVFFGVEISSHQKKHPLNTKHHTVDFGANAYIIDHDSP
                     YGYMTLTDHFDNAIPPVFYHEHQSFLDKFSEVNKEVSRYVHGSKGIIDVPIFNTKDMK
                     LGLGLYLIDFIRKSEDQSFKEFCYGKNLAPVDLDRIINFVFQPEYHIPRMVSTENFKK
                     VKIREISLEEAVTASNYEEINKQVTNKKIALQTLFLSITNQKEDVALYILSNFEITRQ
                     DVISIKHELYDIEYLLSAHNSSCKVLEYFINKGLVDVNTKFKKTNSGDCMLDNAIKYE
                     NAEMIKLLLKYGATSDNKYI"
     gene            complement(8954..9102)
                     /locus_tag="JN001_003223"
                     /pseudo
     CDS             complement(8954..9102)
                     /locus_tag="JN001_003223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            9178..10875
                     /gene="ospD3"
                     /locus_tag="JN001_003224"
     CDS             9178..10875
                     /gene="ospD3"
                     /locus_tag="JN001_003224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector OspD3"
                     /protein_id="HAY9054359.1"
                     /translation="MPSVNLIPSRKICLQNMINKDNVSVETIQSLLHSKQLPYFSDKR
                     SFLLNLNCQVTDHSGKLIVCRHLASYWIAQFNKSSGHVDYHHFAFPDEIKNYVSVSEE
                     EKAINVPAIIYFVENGSWGDIIFYIFNEMIFHSEKSRALEISTSNHNMALGLKIKETK
                     NGGDFVIQLYDPNHTATHLRAEFNKFNLAKIKKLTVDNFLDEKHQKCYGLISDGMSIF
                     VDRHTPTSMSSIIRWPNNLLHPKVIYHAMRMGLTELIQKVTRVVQLSDLSDNTLELLL
                     AAKNDDGLSGLLLALQNGHSDTILAYGELLETSGLNLDKTVELLTAEGMGGRISGLSQ
                     ALQNGHAETIKTYGRLLKKRAINIEYNKLKNLLTAYYYDEVHRQIPGLMFALQNGHAD
                     AIRAYGELILSPPLLNSEDIVNLLASRRYDNVPGLLLALNNGQADAILAYGDILNEAK
                     LNLDKKAELLEAKDSNGLSGLFVALHNGCVETIIAYGKILHTADLTPHQASKLLAAEG
                     PNGVSGLIIAFQNRNFEAIKTYMGIIKNENITPEEIAEHLDKKNGSDFLEIMKNIKS"
BASE COUNT         3403 a         2337 c         2335 g         2934 t
ORIGIN      
        1 tcaggctcgc ccctccgttg taatgtgcca gccgggaggc cgctatcggc ggcttcttca
       61 gataacgacc caggtagcgc gccgtattcc tcccgccggc cattttcttc gacatgtaca
      121 tcaggcgcgg aactcatcgg ggcgcgggaa tgaaatccca ttcagactcc ggatagattc
      181 aagcaagccc acttatcgtc aaaatcggtg ttgcaaaaac gggagtgacc atagatccgt
      241 tttccaagcg gaccccataa tatcggctgg taaacatcac tcgctagtgc attctttttg
      301 ttggtaatga taattattta catttattct ttgatgtttt atcataatta atgttttatc
      361 aataaatata tggaaatata ttgtttcaga tgggaatatg agaaagttca tccttatttc
      421 tatgataacg ttagctagtg ttagtctggg agcctgcaga cagaatgcca ccataaagca
      481 ggatgcgcca gggcagaaag ctttcctgat tgacgggcag atttacgatt tgcacagtgg
      541 caaaattatt tctagcagcg agcttttggc ggatcttgct accgctcgac atcttattat
      601 tggtgaaaaa cacgataatg ccgagcatca tcagattgag ctttggctta ttcaaaatct
      661 gctcatccag cgaccacagg ggagtgtgtt gcttgagatg ttgacgtcag accaacagcc
      721 ccgagttaac caagttaaat gttggctgaa agataatcct gtggttcgag atagccgtgt
      781 tcaggaacta cttaactggc aaaaagggtg gtcctgggag atgtatggcg acatcgtcat
      841 gcagctatta cgtgggcctt acccgctgct caatgccaac attggccggg agcagatgtt
      901 ggcactgtac aaaaaaaacg aatttcctaa aggaaaaaaa tccactgcac ctgtggtaca
      961 agaagctctg cgtgaaacca tcatagctat gcatgaaggc aaccttgaaa gccagcaact
     1021 gacgtcaatg ctctctgttc agcagcagcg ggatcgctac atggcccgcc agcttctgag
     1081 tgccccggta ccgtcgttgt tgattgcagg tggttatcac gcgtcaaaaa acatgggcgt
     1141 accgttacac atggaagatc ttgccaccgg cacccatcca gtggtgttga tgcttgcaga
     1201 aaaaggaatg aacatcacag tagatcatgc tgactacgtg tggtttgtag cgccagatac
     1261 aacaaaaagg taaaccatgg atgatgaata ttctccactt cccacagtcg gtaaaatgga
     1321 gcagctggtt tatctgttct ctactgcttc atggactgat tttccttacg tttatctggc
     1381 gtttttccga agttcagccc gctatgtctc ctgcaccggc gatcatgctg caatgggcag
     1441 aaattataga ggctccttct tctccacttt cgcttccggt gggaatcgct caacaggagt
     1501 ccgcagtgac agaagaaaag caacaaactg aggacagaca acaacgtcct gtcactgaag
     1561 acagtgatgc aaccattgaa ataactagga agaaaaagtc atccgatgga gaaaagaaaa
     1621 agacacgtcc acctcgtaag ataaaggctc aaaccagcga cagcaacccc acagccgttt
     1681 ccagtaatgc tgcacctcag gctctggtcg aatcgtcccg tattgctgcg ccttttaaca
     1741 gtgactcaac aaagcgagat aattctgagg catcttggga aagcagagta aaaggccacc
     1801 ttaaccgtta taaacgttac cctggcgatg ccagaaaacg tgcacgaacc ggcacagccg
     1861 ttgtgacttt taccgtaaac acggaaggca ctattgtcag tagtttcttg gaaatctcgt
     1921 caggaaccct ttctcttgac cgcgaagcta ttgctgtttt agaacgcgct caaccacttc
     1981 ccaaaccacc gcctgaaata ttggagggag gattatttaa agtaaaaatg ccgattacct
     2041 ttaagttgaa ggagtaaagg gataattggc cgttcaagtt catttaactg aaatttaatt
     2101 ttcattttta tgctgaacat tttatcaaac ttttccactg tcgaaaaaat caaaaagaca
     2161 gtagatcata attaataaat aaatagttat acttatcttt attaatatta tatccaagga
     2221 aatttatgaa cgttataaaa ctggctatcg gctcaggcat attattgctc agctgcggtg
     2281 cttactcaca atccatcagt gaaaaaacta attccgacaa aaaaggagcg gcagaattca
     2341 gtccgctcag cgtttctgtc gggaagacga ccagtgagca ggaagctctc gagaaaacag
     2401 gcgcgaccag ttcccggaca acggacaaaa acctgcaatc acttgacgca acagtgcgta
     2461 gtatgcctgg tacttatact caaatagatc ctggtcaggg agcaatcagt gtgaatattc
     2521 gaggcatgag cggatttggt cgtgtaaaca ctatggtcga tggtattacc cagagttttt
     2581 acggaacctc tacctccgga acaacggcgc atggttcaac taacaatatg gctggcgtac
     2641 ttatagatcc taacttactg gtagcagttg atgttacacg cggtgacagc agtggctctg
     2701 aagggatcaa cgcccttgcc ggtagtgcaa atatgcgtac tattggcgtt gacgatgtaa
     2761 tatttaacgg taatacatat ggccttcgtt cacgtttctc tgtcggtagt aatgggctgg
     2821 gacgcagcgg aatgatcgcc cttggtggaa aaagcgacgc ttttacggat acgggaagca
     2881 ttggcgttat ggctgctgtg agtggcagtt ctgtgtactc taatttctca aatggttctg
     2941 gaattaacag caaagagttt ggttatgata aatatatgaa gcagaacccc aaatcccaac
     3001 tgtataaaat ggatatcaga ccagacgaat ttaacagctt cgaactttcc gctcgaacct
     3061 atgaaaataa atttacacgt cgtgatataa ccagtgacga ctattacatt aaatatcatt
     3121 acaccccttt ttctgaatta attgacttta acgtaacggc cagtaccagt cgcggtaatc
     3181 aaaagtatcg tgatggctcg ctgtatactt tctacaaaac ctcagcgcaa aatcgttctg
     3241 acgcgctgga tatcaacaat accagccggt tcactgtcgc ggacaatgaa ctggagttta
     3301 tgctgggcag caaactgatg cgtacccgct atgaccggac cattcactca gcggcgggcg
     3361 acccgaaagc gaatcaggaa tcgatcgaga acaatccgtt cgcaccctcc ggccagcagg
     3421 atatttcagc gctgtatacc gggctgaagg ttacgcgcgg catctgggag gcagatttca
     3481 atctcaacta cacacgtaac aggatcacag ggtacaagcc cgcctgcgat tcacgcgtta
     3541 tctgcgtgcc acagggtagc tacgatattg acgataaaga gggtggcttc aacccttcag
     3601 ttcagctttc tgctcaggta acaccatggc ttcagccgtt cattggctac agcaaatcca
     3661 tgcgcgcccc gaacatccag gagatgttct tctctaattc aggaggcgca tccatgaacc
     3721 cattcctgaa gcctgaacgt gcagaaacct ggcaggcggg ttttaacatt gataccagag
     3781 atttactggt cgaacaggat gccctgcgct ttaaggctct ggcgtaccgc agcaggatcc
     3841 agaactacat ctacagcgag tcttatctgg tttgttctgg aggtcgtaaa tgcagtatgg
     3901 ctgaggtgat tggcaatgac tgggagggca ttagcgatga atacagcgac aatatgtaca
     3961 tctacgttaa ctcggcaagc gacgttattg caaagggctt cgaactggag atggattatg
     4021 atgcaggttt tgcttttggc cgactctctt tcagccagca gcaaacagac cagccaacct
     4081 ccatcgccag cacctacttt ggcgcagggg atatgaccga actgcccaga aaatacatga
     4141 cgctggatac tggtgttcgc ttcttcgata acgcgttgac cctgggcact atcataaaat
     4201 acacaggcaa ggctcgtcgc ctgtcgcctg attttgagca ggacgaacat accggcgcaa
     4261 taatcaaaca ggatttgccg cagatcccaa cgattatcga tctctatggt acttacgagt
     4321 acaaccgcaa cctgacactg aaactttcgg tacaaaacct gatgaacaga gattattcgg
     4381 aggcgctgaa taagctcaac atgatgccag gtcttggtga cgagagccac ccagccaatt
     4441 ccgcgcgtgg cagaacatgg atatttggcg gggacattcg tttctgatga caatttccgc
     4501 caggttcaga caatacgttt tctctcttat gtcaatttta ttgcaggaac gaaaaatgaa
     4561 tattttcact ttatccaaag caccgctata cttgttaatt tcactatttt tacccacgat
     4621 ggccatggct atcgatccac ctgaacgcga actttcgcga tttgccctga aaacgaatta
     4681 ccttcagtcc cctgatgaag gcgtctatga actggcgttt gataatgcca gtaaaaaggt
     4741 gtttgcagca gtcaccgatc gtgtaaatcg tgaagccaat aaaggctatc tgtattcgtt
     4801 taattcagat tcgctgaaag tcgaaaataa atacacgatg ccataccggg cattttcgct
     4861 ggcgataaat caggataaac atcagctcta tatcggacac acccagtcag cgtccctgcg
     4921 tatcagtatg tttgacaccc caaccggtaa actggtaaga accagcgaca ggttaagttt
     4981 taaagcggca aacgctgcag attcgcgttt tgagcatttg cgccatatgg tttacagcca
     5041 ggattccgat accctgtttg tgagttatag caatatgctg aaaacggccg agggcatgaa
     5101 gcctctgcat aagctgttaa tgctcgacgg gacgacgctt gccttaaaag gcgaggttaa
     5161 ggatgcttac aaaggtacag cgtatggtct gacgatggat gaaaaaacac agaaaatcta
     5221 cgttggcgga agagattaca tcaacgaaat tgatgcgaaa aatcagacgc tgctgcgtac
     5281 catcccgttg aaagatccga gaccacaaat cacaagtgtg cagaatctgg cggtggactc
     5341 cgcttctgac cgtgcctttg tggtggtatt cgaccatgac gatcgttccg gtacaaaaga
     5401 tggcctctat atttttgact tacgcgacgg taaacagctt ggctatgtgc acacaggagc
     5461 cggagctaac gcggtgaaat acaatccgaa atataacgaa ctgtatgtca ccaacttcac
     5521 tagcggcacc atcagcgtag tggatgccac caaatacagc atcacccgtg aatttaacat
     5581 gccggtctac ccaaaccaga tggtgttgtc ggacgatatg gatacccttt acattggcat
     5641 caaagaaggc tttaaccgcg attgggatcc tgatgtgttt gtggaaggag ctaaagaacg
     5701 tattctgagc attgatttga aaaagtcgtg atcgggggaa aaaacatggg ataaaaactc
     5761 cgttattcca ctaaactggc cggactagga aaagcaaaca tctctgtcct gccggtacgc
     5821 ctgttacgcc gctccatgag gctgaggaat ctccagaaaa cgagacaggc acagcattgt
     5881 acgatcaact gatttgtgcc aataattcaa tgaaatcaca gctatgcctg ttcacgtata
     5941 ggaaattgaa aaactaagcg ataccactgt ccgcgtctta tgcctcgtgc ggtaagctgt
     6001 ttttcacatc acgccggtgt ttttttcttt ctgtggacgg ttttaatact gtaatcggcc
     6061 gttttttata cttaccccga ttcccgggcg cacttatcct gcatcacccc gggatatacc
     6121 tcagcagact gatatcccgc gcgtttttct tcagcccctc cacattcagt cccgcgatgg
     6181 cccggcggta taccatccgg ccgccacaca gcacgcattc gaacgggtca cgactcagga
     6241 actgtttcac catttgtgca tagcacactt tcgccactgg ttccggttta tcctgttttt
     6301 ataacggtaa ttgcagacca tgacaaaccg cagccgtcag gctgcctact cgagtcacaa
     6361 ggctctctgt gtccgatatg ccggcagcgc attacccatg aaactggctg gaacgtacac
     6421 cataaggtga agaaagttat ggggggcggt gaagaattat ctaaccttgt cttgttacat
     6481 ccaaattgcc atcgacagtt acacagttgt gaagccggct ctctcaaaaa gggcttataa
     6541 aggcttgagc ggtgtaccgg gaaaccggta tgcaccgttc ttaggggagg gcagtccagc
     6601 aatgaactgt ccttacccga caaacatcca aaacgaacgg aacgtgctgg aatccgcata
     6661 taacccgttg taaagtgagg aaatggacac ctcacttgct catgagaacg cccgcctgcg
     6721 ggcactgttg cagacgcaac aggacactat ccaccagatg gctgaataca accgcctgct
     6781 ctcacagcgg atggcggctt atgcttccga aatcaaccga ctgaaggcgc tggttgcgaa
     6841 actgcagcgt atgcagttcg gtaaaagccc agaaaaactt cgcgcaaaaa ccgaacggca
     6901 gattccattt tcacgggcga tctacgccac acaggctctg ggttgcagtg actgctccat
     6961 taaggcgatt ttgaactcat aagggaagta acaaaaaaac tgcaaaagta caataattat
     7021 atatggccaa actaacctct attaaaaaaa catcagtttt tcacacttag ttgagcttca
     7081 tgaaaaaatc atcgaggatt tcattgcaga atacacattc cactaactgg aagcactcca
     7141 taagaggaat cagagaaagt atcgtttttt tatagtaaaa ttcattgctg ttcaataaaa
     7201 ttgatataat tattaaatta tggaaataat ttcacaaaaa agattaactt gagttcttaa
     7261 gcatcggatt ttagatattt tgaaatatct ggcatcacat aacatcaaaa gtatataata
     7321 cccttatcta attacatgca gtatattgta tatatactca aaaattgtaa ttcataccct
     7381 actatatctt gtggggaaag atattaatta aaactgtttt catataaggt tcattttatg
     7441 aatatatcag aaacactgaa ctcagcaaat acccaatgca atatagattc tatggataac
     7501 agattacata cattgtttcc aaaagtgaca tcagtgcgaa acgctgcaca acaaactatg
     7561 ccagatgaaa aaaatttaaa agatagtgca aatattatta aagatttctt taggaaaact
     7621 atagcagcac aaagttatag tagaatgttc tctcaaggct ctaactttaa atctttaaat
     7681 atagcaattg atgcaccatc agacgctaaa gcctcattta aggctattga gcaccttgac
     7741 agattatcga agcattatat atctgaaata agggaaaaac ttcatcctct ttctgcagag
     7801 gaactcaatt tgctttcgct aattattaat tctgatttaa tcttcagaca tcaaagtaat
     7861 tctgatttgt ctgataaaat tttaaacatt aagtcattca ataaaattca gtctgaagga
     7921 atatgcacaa aacgaaacac atacgctgat gatataaaaa aaatagctaa tcatgacttt
     7981 gtgttttttg gcgttgaaat ctctagccat cagaaaaaac accccctgaa tacaaaacat
     8041 cacactgttg attttggtgc aaatgcgtat atcattgatc atgactctcc atatggatat
     8101 atgacattaa ccgatcactt tgataatgct attccacctg ttttttacca tgagcaccaa
     8161 tcatttttag ataaattttc agaggttaat aaagaagtta gtcgatacgt acatggaagt
     8221 aaaggaatta tagatgtacc aatattcaat actaaagata tgaagttagg gctcggatta
     8281 tacctgattg actttattag aaaaagtgaa gaccaaagct tcaaggagtt ttgctatgga
     8341 aaaaatcttg cccctgtgga tctggataga atcataaact ttgtttttca gccagagtac
     8401 catataccta ggatggtaag tacagaaaac ttcaaaaaag ttaagattag agaaatatcc
     8461 ttagaggagg ctgttacagc atctaattac gaagaaatta acaagcaggt cactaacaaa
     8521 aaaattgctc tccagactct ttttctttcg attactaatc aaaaagagga tgtcgcctta
     8581 tatatattat ctaattttga gataactaga caagatgtta tttccataaa gcatgagttg
     8641 tatgatattg agtatctact tagcgctcat aattcaagct gtaaagtact tgagtatttt
     8701 atcaataagg ggttggttga tgtaaacaca aagttcaaaa aaactaatag tggggattgt
     8761 atgttggata acgcaataaa atatgagaat gcagaaatga taaaactatt attgaaatat
     8821 ggtgcaacat ctgacaataa atatatttaa tcaaaattga atatcgttta gcaaaaggca
     8881 gtatttgcac aaaatatcga tatattgttt attgtcagta tggctcaatg tgataatagt
     8941 tggaaagttt gatgggtttc gccccgttgt agcggtagtc gagctggaag gtcttcaggc
     9001 actgcttaca gcgatagagc agcccccctg aactggaatg gccgttccgg ataccccctg
     9061 agtttcagag taacggggac aaaccacatc aatctttgcc atcaatcatc caaagggcaa
     9121 agagtacaac aacactaagt ctgcgtcaca acccatcaat gaaaggaata tatacatatg
     9181 ccatcagtaa atttaatccc atcaaggaaa atatgtttgc aaaatatgat aaataaagac
     9241 aacgtctctg ttgagacaat ccagtctcta ttgcactcaa aacaattgcc atatttttct
     9301 gacaagagga gttttttatt aaatctaaat tgccaagtta ccgatcactc tggaaaactt
     9361 attgtctgtc gacacttagc ttcctactgg atagcacagt ttaacaaaag tagtggtcac
     9421 gtggattatc atcactttgc ttttccggat gaaattaaaa attatgtttc agtgagtgaa
     9481 gaagaaaagg ctattaatgt gcctgctatt atttattttg ttgaaaacgg ttcatgggga
     9541 gatattattt tttatatttt caatgaaatg atttttcatt ccgaaaaaag cagagcacta
     9601 gaaataagta catcaaatca caatatggca ttaggcttga agattaaaga aactaaaaat
     9661 gggggggatt ttgtcattca gctttatgat cccaaccata cagcaactca tttacgagca
     9721 gagtttaaca aatttaactt agctaaaata aaaaaactga ctgtagataa ttttcttgat
     9781 gaaaaacatc agaaatgtta tggtcttata tccgacggta tgtctatatt tgtggacaga
     9841 catactccaa caagcatgtc ctccataatc agatggccta ataatttact tcaccccaaa
     9901 gttatttatc acgcgatgcg tatgggattg actgagctaa tccaaaaagt aacaagagtc
     9961 gtacaactat ctgacctttc agacaatacg ttagaattac ttttggcagc caaaaatgac
    10021 gatggtttgt caggattgct tttagcttta caaaatgggc attcagatac aatcttagca
    10081 tacggagaac tcctggaaac ttctggactt aaccttgata aaacggtaga actactaact
    10141 gcggaaggaa tgggaggacg aatatcgggt ttatcccaag cacttcaaaa tgggcatgca
    10201 gaaactatca aaacatacgg aaggcttctc aagaagagag caataaatat cgaatacaat
    10261 aagctgaaaa atttgctgac cgcttattat tatgatgaag tacacagaca gatacccgga
    10321 ctaatgtttg ctcttcaaaa tggacatgca gatgctatac gcgcatacgg tgagctcatt
    10381 cttagccccc ctctcctcaa ctcagaggat attgtaaatt tgctggcctc aaggagatat
    10441 gacaatgttc ccggacttct gttagcattg aataatggac aggctgatgc aatcttagct
    10501 tatggtgata tcttgaatga ggcaaaactt aacttggata aaaaagcaga gctgttagaa
    10561 gcgaaagatt ctaatggttt atctggattg tttgtagcct tgcataatgg atgtgtagaa
    10621 acaattattg cttatgggaa aatacttcac actgcagacc ttactccaca tcaggcatca
    10681 aaattactgg cggcagaagg cccaaatggg gtatctggat taattatagc ttttcaaaat
    10741 aggaattttg aggcaataaa aacttatatg ggaataataa aaaatgaaaa tattacacct
    10801 gaagaaatag cagaacactt ggacaaaaaa aatggaagtg attttctaga aattatgaag
    10861 aatataaaaa gctgaatatt atctcgtggt gatacactga atttgaggta accggctcat
    10921 ttaaaccgtc tggtctgtta cctccggttc cacaaaaata atgtccatca ttttgaagtg
    10981 gacactatcg tatggaatac cggacctgg
//
LOCUS       DADMJE010000140        10927 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.143, whole genome shotgun sequence.
ACCESSION   DADMJE010000140 DADMJE010000000
VERSION     DADMJE010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10927
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.143"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            260..747
                     /locus_tag="JN001_003225"
                     /pseudo
     CDS             260..747
                     /locus_tag="JN001_003225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rtcB domain protein"
     gene            744..1358
                     /locus_tag="JN001_003226"
     CDS             744..1358
                     /locus_tag="JN001_003226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY9054360.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1415..2872)
                     /gene="pepD"
                     /locus_tag="JN001_003227"
     CDS             complement(1415..2872)
                     /gene="pepD"
                     /locus_tag="JN001_003227"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY9054361.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3133..3591
                     /gene="gpt"
                     /locus_tag="JN001_003228"
     CDS             3133..3591
                     /gene="gpt"
                     /locus_tag="JN001_003228"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY9054362.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVPPISGR"
     gene            3683..4927
                     /gene="frsA"
                     /locus_tag="JN001_003229"
     CDS             3683..4927
                     /gene="frsA"
                     /locus_tag="JN001_003229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase FrsA"
                     /protein_id="HAY9054363.1"
                     /translation="MTQANLSETLFKPRFKHPETSTLVRRFNHGAQPPVQSALDGKTI
                     PHWYRMINRLMWIWRGIDPREILDVQARIVMSDAERTDDDLYDTVIGYRGGNWIYEWA
                     TQAMVWQQKACAEEDPQLSGRHWLHAATLYNIAAYPHLKGDDLAEQAQALSNRAYEEA
                     AQRLPGTMRQMEFTVPGGAPITGFLHMPKGDGPFPTVLMCGGLDAMQTDYYSLYERYF
                     APRGIVMLTIDMPSVGFSSKWKLTQDSSLLHQHVLKALPNVPWVDHTRVAAFGFRFGA
                     NVAVRLAYLESPRLKAVACLGPVVHTLLSDFKCQQQVPEMYLDVLASRLGMHDASDEA
                     LRVELNRYSLKVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLITSSSADGKLLEIPFN
                     PVYRNFDKGLQEITGWIEKRLC"
     gene            4985..5386
                     /locus_tag="JN001_003230"
     CDS             4985..5386
                     /locus_tag="JN001_003230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma factor-binding protein Crl"
                     /protein_id="HAY9054364.1"
                     /translation="MTLPSGHPKSRLIKKFTALGPYIREGKCEDNRFFFDCLAVCVNV
                     KPAPEVREFWGWWMELEAQESRFTYSYQFGLFDKAGDWKSVPVKDTEVVERLEHTLRE
                     FHEKLRELLTTLNLKLEPADDFRDEPVKLTA"
     gene            complement(5425..6480)
                     /gene="phoE"
                     /locus_tag="JN001_003231"
     CDS             complement(5425..6480)
                     /gene="phoE"
                     /locus_tag="JN001_003231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoporin PhoE"
                     /protein_id="HAY9054365.1"
                     /translation="MKKSTLALVVMGIVASASVQAAEIYNKDGNKLDVYGKVKAMHYM
                     SDNDSKDGDQSYIRFGFKGETQINDQLTGYGRWEAEFAGNKAESDTAQQKTRLAFAGL
                     KYKDLGSFDYGRNLGALYDVEAWTDMFPEFGGDSSAQTDNFMTKRASGLATYRNTDFF
                     GVIDGLNLTLQYQGKNENRDVKKQNGDGFGTSLTYDFGGSDFAISGAYTNSDRTNEQN
                     LQSRGTGKRAEAWATGLKYDANNIYLATFYSETRKMTPITGGFANKTQNFEAVAQYQF
                     DFGLRPSLGYVLSKGKDIEGIGGEDLVNYIDVGATYYFNKNMSAFVDYKINQLDSDNK
                     LNINNDDIVAIGMTYQF"
     gene            6768..7871
                     /gene="proB"
                     /locus_tag="JN001_003232"
     CDS             6768..7871
                     /gene="proB"
                     /locus_tag="JN001_003232"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HAY9054366.1"
                     /translation="MSDSQTLVVKLGTSVLTGGSRRLNRAHIVELVRQCAQLHAAGHR
                     IVIVTSGAIAAGREHLGYPELPATIASKQLLAAVGQSRLIQLWEQLFSIYGIHVGQML
                     LTRADMEDRERFLNARDTLRALLDNNIVPVINENDAVATAEIKVGDNDNLSALAAILA
                     GADKLLLLTDQKGLYTADPRSNPQAELIKDVYGIDDALRAIAGDSVSGLGTGGMSTKL
                     QAADVACRAGIDTIIAAGSKPGVIGDVMEGISVGTLFHAQATPLENRKRWIFGAPPAG
                     EITVDEGATAAILERGSSLLPKGIKSVTGNFSRGEVIRICNLEGRDIAHGVSRYNSDA
                     LRRIAGHHSQEIDAILGYEYGPVAVHRDDMITR"
     gene            7883..9136
                     /gene="proA"
                     /locus_tag="JN001_003233"
     CDS             7883..9136
                     /gene="proA"
                     /locus_tag="JN001_003233"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HAY9054367.1"
                     /translation="MLEQMGIAAKQASYKLAQLSSREKNRVLEKIADELEAQSEIILN
                     ANAQDVADARANGLSEAMLDRLALTPARLKGIADDVRQVCNLADPVGQVIDGGVLDSG
                     LRLERRRVPLGVIGVIYEARPNVTVDVASLCLKTGNAVILRGGKETCRTNAATVAVIQ
                     DALKSCGLPAGAVQAIDNPDRALVSEMLRMDKYIDMLIPRGGAGLHKLCREQSTIPVI
                     TGGIGVCHIYVDESVEIAEALKVIVNAKTQRPSTCNTVETLLVNKNIADSFLPALSKQ
                     MAESGVTLHADAAALAQLQAGPAKVVAVKAEEYDDEFLSLDLNVKIVSDLDDAIAHIR
                     EHGTQHSDAILTCDMRNAQRFVNEVDSSAVYVNASTRFTDGGQFGLGAEVAVSTQKLH
                     ARGPMGLEALTTYKWIGIGDYTIRA"
     gene            9251..9326
                     /locus_tag="JN001_003234"
     tRNA            9251..9326
                     /locus_tag="JN001_003234"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:9284..9286,aa:Thr,seq:cgt)
     gene            complement(9341..10504)
                     /locus_tag="JN001_003235"
     CDS             complement(9341..10504)
                     /locus_tag="JN001_003235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HAY9054368.1"
                     /translation="MSLFRRGEIWYASFTLPNGKRFKQSLGTKDKRQATELHDKLKAE
                     AWRVSKLGEIPDITFEEACVRWLEEKAHKKSLDDDKSRIGFWLQHFAGMQLRDITESK
                     IYSAMQKMTNRRHEENWKLRAEACRKKGKPVPEYTPKPASVATKATHLSFIKALLRAA
                     EREWKMLDKAPIIKVPQPKNKRIRWLEPHEAQRLIDECPEPLKSVVEFALATGLRRSN
                     IINLEWQQIDMQRRVAWINPEESKSNRAIGVALNDTACRVLKKQIGNHHRWVFVYKES
                     CTKPDGTKAPTVRKMRYDANTAWKAALRRAGIDDFRFHDLRHTWASWLVQAGVPLSVL
                     QEMGGWESIEMVRRYAHLAPNHLTEHARQIDSILNPSVPNLSQSRNKERTNDV"
     gene            complement(10381..10815)
                     /locus_tag="JN001_003236"
     CDS             complement(10381..10815)
                     /locus_tag="JN001_003236"
                     /inference="COORDINATES: protein motif:HMM:NF024139.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009518805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9054369.1"
                     /translation="MGYDSRLDRLATTSWHSFFNNITARGEIMEPYSLTLDEACHFLK
                     ISRPTAINWIRTGRLQATRKDPTKNKSPYLTTRQACIAALQSPLHTVQVSAGDGITEE
                     RKCHSSAEVKYGTPVSHCRTVKDLNSLLEQRTKGRRQNSMTS"
     gene            complement(10731..>10927)
                     /locus_tag="JN001_003237"
     CDS             complement(10731..>10927)
                     /locus_tag="JN001_003237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000206055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054370.1"
                     /translation="LEVEPDERESYELFMEKHFGGLVDSRRAKNGDNEYMAWDMTLGW
                     IVWQQRAGIHFSTISQQEVK"
BASE COUNT         2598 a         2699 c         2824 g         2806 t
ORIGIN      
        1 ctattagcgg ttaccagcgc cccaccagac ccggtgacat caccccccgg atcatggacg
       61 actgggggca gtaatcatgc cgggtctggc tggctaacac cccattataa ggggtacgaa
      121 taaagtaacg gggcagtcta ttttacagcg gcatattgcc tcgttctcgc atcatggttt
      181 gcctcaaggc agtgacgacg cgctacggta tattgcggaa catgacgatg cgctggcgtt
      241 tgcgtgtatt aatcgccaga tgatcgcttt gcgcataatg caacaagtta aggccacggg
      301 aagtccggtt ctggatgtgg cgcataactt tgttagcgcg tgtcaaatcg gcgtcaacag
      361 ggctggttgc atcgtaaagg tgccacgccg gatgacaacg gtctggtgat tattcccggt
      421 tcacgtggtg attactcctg gattgtacag cctgttgcga acgaaaaaac gctccactcg
      481 ctggcgcatg gggcagggcg taaatggggg cgcaccgagt gtaaatggcg tctggcagcg
      541 aaatacacgg tgacgcaact ctcgcggact gaacttggca gtcggataat ttgtcgcgat
      601 aaacaactca tctttgaaga agcgccacaa gcctataaat cggctgaaag cgtggtgcaa
      661 tgtctggtgc aggccggttt aattattcct gtcgcgcggc tgcgtccggt gctaacgctc
      721 aaaaacagtg gagggaaaaa aggatgatct tgctacaact ctcctcagcg caggggccgg
      781 aagaatgttg tctcgcagtg aaaaaggcgc tggacaggct aattaaagaa gctgcccgac
      841 aagacgtcgc ggtaacggtg ttggaaacag aaacgggccg ctactctgac acgctgcgtt
      901 cagctctggt ttctctggat ggcgataacg catgggcatt aagcgaaagc tggtgtggca
      961 ctattcagtg gatttgtccg agtccgtatc ggcctcatca tgggcgcaaa aactggtttc
     1021 tgggcattgg gcgttttacc gctgatgagc aggagcaatc cgatgcgatc cggtatgaga
     1081 cgctgcgttc gtcggggccg ggcggtcaac atgtcaataa aaccgactcg gcggtacgcg
     1141 ccacgcattt ggcatccggt attagcgtga aggttcagtc agagcgtagt cagcatgcta
     1201 acaagcggct ggcacgattg ctgattgcct ggaagctgga gcagcagcaa caggaaaata
     1261 gcgcggtgct gaaatcgcag cggcgaatgt tccatcacca gattgaacgt ggcaacccga
     1321 gacggacatt tacagggatg gcttttatcg aaggataatg aaggatgaaa ctgccggaag
     1381 gcgattaaac gccatccggc agcaaatcaa ataattactt cgccggaatt tctttcagca
     1441 gttcagtcag cagtgtccag taatgaccta cgctttcgat gtgaacttgc tcatccggag
     1501 agtgtggacc ggtgatagtt ggcccgatag aaaccatgtc catttccgga tacggttttt
     1561 tgaacagacc acattccagg cccgcgtgga taatctggat gttcggcgtc ttgttgaaca
     1621 ggcgctgata ggtttcacgt accagatgca tcaccggaga attagcgtcc ggctgccagc
     1681 caggatatgc gcctttcgct tcggttttcg cgccagccag tttacccagc gaatccagca
     1741 tgctcaccac gtagtcttta ccgctgtcga tcagtgaacg gatcaggcag tgaatttcta
     1801 cgttattgtc agtcatggtc accacaccga cgttcaggga ggtttcaacc acacctttgg
     1861 ctacatcgga gttgcggatc acaccgttcg gggtggcgtt cagcagacga ataaaggtat
     1921 cgcgagattt cgcaatcagg gcagctttat cgttcgctac agagtccagc aacaaggcca
     1981 gatttttctc tttctctgcc agctcgtttt tcaggatctc ctgataggta ttcaccagag
     2041 atttcagtgc gtcgacttta tcagctgcga cagcaatggt cgcaaaggct tcacgcggga
     2101 tggcgttacg cagtgtgccg ccgttgaaat cgataaggcg caggtccagt tcttctgcat
     2161 gacccgccag gaagcgcacc agcagtttgt tggcattacc caggccaacg tggatttcac
     2221 cgccggagtg accgcctttc agacctttta aggttaactt gaaggtttca aaaccagctg
     2281 gaaccgcttc acgatctaaa tgcaggttgg aggtgaagtc gatacccccc gcacaaccca
     2341 tgtagatttc accttcttct tcggagtcgg tgttaatcag aatatcagcc tgcaaccagt
     2401 tgctctgtaa gccaaaagca ccgtccatac cggcttcttc ggtcatggtc agcagcactt
     2461 ccagcggacc gtgaaccacg ttttcgtcag ccagaaccgc cagtgcagag gccataccaa
     2521 tgccgttatc cgcacccagc gtggtgccgc gcgctttaac ccattcgcca tcaatataag
     2581 gctggatagg atctttcgtg aagtcatgca cggtgtcgtt atttttctgc ggcaccatat
     2641 cgaggtgggc ctgtaagacg accggtttac gattttccat acctgcggta gcaggtttac
     2701 gaatcaggat attacctacc tgatcgcgtt cgacatggaa acctttctct tttgcccaac
     2761 caacaatgta ttcagcgagt tgctcttcat gataggacgg gtgcggaata gaacagattt
     2821 tggcaaaaat atcccacagc ggctgtggag ataattgaga cagttcagac acgttaagtc
     2881 tccttgtcga tcacccgcaa aacagtattg caggtcacag ggttagcaga aaatgttgtc
     2941 aacacaagac aggcttgcga gatatgtttg agaataccac tttatcccgc gtcagggaga
     3001 ggcagtgcgt aaaaagacgc ggactcatgt gaaatactgg tttttagtgc gccagatctc
     3061 tataatctcg cgcaacctat tttcccctcg aacacttttt aagccgtaga taaacaggct
     3121 gggacacttc acatgagcga aaaatacatc gtcacctggg acatgttgca gatccatgca
     3181 cgtaaactcg caagccgact gatgccttct gaacaatgga aaggcattat tgccgtaagc
     3241 cgtggcggtc tggtaccggg tgcgttactg gcgcgtgaac tgggtattcg tcatgtcgat
     3301 accgtttgta tttccagcta cgatcacgac aaccagcgag agcttaaagt gctgaaacgc
     3361 gcagaaggcg atggcgaagg cttcatagtt attgatgacc tggtggatac cggtggtact
     3421 gctgttgcga ttcgtgaaat gtatccaaaa gcgcactttg tcaccatctt cgcaaaaccg
     3481 gctggtcgtc cgctggttga tgactatgtt gttgatattc cgcaagatac ctggatcgaa
     3541 cagccgtggg atatgggcgt cgtattcgtc ccgccaatct ccggtcgcta atcttttcaa
     3601 cgcctggcac tgccgggcgt tgttcttttt aacttcaggc aggttacaat agtttccagt
     3661 aagtattctg gaggctgcat ccatgacaca ggcaaacctg agcgaaaccc tgttcaaacc
     3721 ccgctttaaa catcctgaaa cctcgacgct agtccgccgc tttaatcacg gcgcacaacc
     3781 gcctgtgcag tcggctcttg atggtaaaac catccctcac tggtatcgca tgattaaccg
     3841 tctgatgtgg atctggcgcg gtattgaccc acgtgaaatc ctcgacgtcc aggcacgtat
     3901 tgtgatgagc gatgctgaac gtaccgacga tgatttatac gatactgtga ttggctaccg
     3961 tggtggcaac tggatttatg agtgggccac ccaggcgatg gtgtggcaac aaaaagcctg
     4021 tgcggaagaa gatccgcaac tcagtggtcg acactggctg catgcggcta cgttgtacaa
     4081 cattgccgcc tatcctcatc tgaaaggaga tgacctggcc gagcaagcgc aggctttatc
     4141 aaaccgcgcc tatgaagagg ccgcccagcg tctgccgggc acgatgcggc agatggagtt
     4201 taccgtaccc ggcggtgcgc ccatcaccgg ctttttgcat atgccgaaag gcgatggccc
     4261 gttcccgaca gtattaatgt gtggtggtct ggatgcgatg cagacggact attacagcct
     4321 gtatgaacgt tattttgcgc cgcgcggcat tgtgatgctg actattgata tgccgtcggt
     4381 gggcttttct tcaaaatgga agctcaccca ggactccagc ctgttgcatc agcacgtctt
     4441 aaaggcgctg cctaacgtac cgtgggtgga tcacactcgc gtcgcggcct ttggtttccg
     4501 tttcggcgct aacgttgccg tgcgtctggc atatcttgaa tcgccgcgtc tgaaagcggt
     4561 tgcctgtctt ggtccggtag ttcataccct gttgagtgat tttaagtgcc agcaacaggt
     4621 gccggaaatg tatcttgacg ttctggcgag tcgtttgggg atgcatgatg cttccgacga
     4681 agcgttacgc gtggagctga atcgctattc attaaaagtg caaggattgc tgggacgtcg
     4741 ctgcccaacg ccaatgttat caggctactg gaagaacgat ccgttcagcc cggaagagga
     4801 ctcacgctta atcacctcat catctgctga cggtaaatta ttagagatcc catttaaccc
     4861 ggtgtatcgg aattttgaca aaggtcttca ggaaatcacc ggctggatcg aaaaacgctt
     4921 gtgttaaaaa tttgctaaat tttgccaatt tggtaaaaca gttgcatcac aacaggagat
     4981 agcaatgacg ttaccgagtg gacacccgaa gagcagattg atcaaaaaat ttaccgcact
     5041 aggcccgtat attcgtgaag gtaagtgcga agataatcga ttctttttcg attgtctggc
     5101 tgtatgcgtc aacgtgaaac cggcaccgga agtgcgtgaa ttctggggct ggtggatgga
     5161 gctggaagcg caggaatccc gttttaccta cagctaccag tttggtctgt tcgataaagc
     5221 aggcgactgg aagagtgttc cggtaaaaga tactgaagtg gttgaacgac tggagcacac
     5281 cctgcgtgag tttcacgaga agctgcgtga actgctgacg acgctgaatc tgaagctgga
     5341 accggcggat gattttcgtg acgagccggt gaagttaacg gcgtgagtga aatgtgccgg
     5401 atgcatcaca tccggcaata tctattaaaa ctgatacgtc atcccaatcg cgacaatatc
     5461 atcattatta atattcaatt tgttatcgct atccagttgg ttgattttat aatcaacaaa
     5521 tgctgacata tttttgttga aataatacgt agcaccgacg tcgatataat taaccagatc
     5581 ttcaccaccg atgccctcaa tatctttccc tttcgataag acataaccca gcgatggacg
     5641 cagaccaaag tcaaactggt attgagcgac cgcttcaaag ttctgtgtct tattggcaaa
     5701 gccgccagtt attggcgtca ttttgcgagt ttcagaatag aaagttgcca gataaatatt
     5761 attggcatcg tatttcagac ctgttgccca tgcttctgca cgcttgcctg tgccacggct
     5821 ttgcaggttc tgctcgttgg tgcgatctga gttggtatag gccccactaa tggcgaaatc
     5881 gctgccgcca aagtcatatg tcaatgacgt gccgaagcca tcgccgtttt gctttttaac
     5941 gtcgcggttt tcgtttttcc cttgatattg cagggttaag ttcaggccat cgataacgcc
     6001 gaagaagtcg gtgttccgat acgtcgccag accgctggcg cgtttggtca taaagttgtc
     6061 ggtctgcgcc gaggagtcgc caccaaattc cggaaacata tcggtccagg cttccacgtc
     6121 atacaacgcg cccaggttac gaccataatc gaaagaaccc aaatctttat atttcaaccc
     6181 ggcaaaagcg agacgcgttt tttgctgtgc agtatcactc tctgctttat taccggcaaa
     6241 ctctgcttcc caacgaccat aaccagtcag ttgatcgtta atttgtgttt cgcctttaaa
     6301 accaaaacgg atataactct ggtcgccatc tttactgtcg ttatcactca tataatgcat
     6361 ggctttaact ttgccataga catccagttt attaccgtct ttgttatata tttctgcggc
     6421 ctgtacggat gcagatgcca caatgcccat caccactaat gccagagtgc tctttttcat
     6481 tttcattcct gattttaatt aacgcgcgaa tattcagcgg gagagccccg ttgaaaacag
     6541 gaaagttttt aacctgagat tgttaaagat atattacaga ttaataatat tcttaaaatg
     6601 tggtaattta ttaaatctgt aataaaagcg taaacaactg ccgctaggct tgctgatccc
     6661 gcgcaacaaa acgccatgct ttgctcgcag atggttggca accgacgaca gtcctgctaa
     6721 aacgttcgtt tgatatcatt tttcctaaaa ttgaatggca gagaatcatg agtgacagcc
     6781 agacgctggt ggtaaaactc ggcaccagtg tgctaacagg cggatcgcgc cgtctgaacc
     6841 gtgcccatat cgttgaactt gttcgccagt gcgcgcagtt acatgccgcc gggcatcgga
     6901 ttgttattgt gacgtcgggc gcgatcgccg ccggacgtga gcacttgggt tacccggaac
     6961 tgccagcgac tatcgcctcg aaacaactgc tggcagcggt agggcagagt cgactgattc
     7021 aactgtggga acagctgttt tcgatttatg gcattcacgt cgggcaaatg ctgctgaccc
     7081 gtgctgatat ggaagaccgt gaacgcttcc tgaacgcccg cgacaccctg cgtgcgttgc
     7141 tcgataacaa tatcgttccg gtaatcaatg agaacgatgc tgtcgctacg gcagagatta
     7201 aagtcggcga taacgataac ctttctgcgc tggcggcgat tctggcgggt gccgataaac
     7261 tgttgctgct gaccgatcaa aaaggtttgt ataccgctga cccgcgcagc aatccgcagg
     7321 cagaactgat taaagatgtt tacggcattg atgacgcact gcgcgcgatt gccggtgaca
     7381 gcgtttcagg cctcggaact ggcggcatga gtaccaaatt gcaggccgct gacgtggctt
     7441 gccgtgcggg tatcgacacc attattgccg cgggcagcaa gccgggcgtt attggtgatg
     7501 tgatggaagg catttccgtc ggtacgctgt tccatgccca ggcgactccg cttgaaaacc
     7561 gtaaacgctg gattttcggt gcgccgccgg cgggtgaaat cacggtagat gaaggggcaa
     7621 ctgccgccat tctggaacgc ggcagctccc tgttgccgaa aggcattaaa agcgtgactg
     7681 gcaatttctc gcgtggtgaa gtcatccgca tttgcaacct cgaaggtcgc gatatcgccc
     7741 acggtgtcag tcgttacaac agcgatgcat tacgccgtat tgccggacac cactcgcaag
     7801 aaattgatgc aatactggga tatgaatacg gcccggttgc cgttcaccgt gatgacatga
     7861 ttacccgtta aggagctggc cgatgctgga acaaatgggc attgccgcga agcaagcctc
     7921 gtataaatta gcgcaactct ccagccgcga aaaaaatcgc gtgctggaaa aaatcgccga
     7981 tgaactggaa gcacaaagcg aaatcattct caacgctaac gcccaggatg ttgctgacgc
     8041 gcgagccaat ggccttagcg aagcgatgct tgaccgtctg gcactgacgc ccgcacggct
     8101 gaaaggcatt gccgacgatg tacgtcaggt gtgcaacctc gccgatccgg tggggcaggt
     8161 aatcgatggc ggcgtactgg acagcggcct gcgtcttgag cgtcgtcgcg taccgctggg
     8221 agttattggc gtgatttatg aagcgcgccc gaacgtgacg gttgatgtcg cttcgctgtg
     8281 cctgaaaacc ggtaatgcgg tgatcctgcg cggtggcaaa gaaacgtgtc gcactaacgc
     8341 tgcaacggtg gcggtgattc aggacgccct gaaatcctgc ggcttaccgg cgggtgccgt
     8401 gcaggcgatt gataatcctg accgtgcgct ggtcagtgaa atgctgcgta tggataaata
     8461 catcgacatg ctgatcccgc gtggtggcgc tggtttgcat aaactgtgcc gtgaacagtc
     8521 gacaatcccg gtgatcacag gtggtatagg cgtatgccat atttacgttg atgaaagtgt
     8581 agagatcgct gaagcattaa aagtgatcgt caacgcgaaa actcagcgtc cgagcacatg
     8641 taatacggtt gaaacgttgc tggtgaataa aaacatcgcc gatagcttcc tgcccgcatt
     8701 aagcaaacaa atggcggaaa gcggcgtgac attacacgca gatgcagctg cactggcgca
     8761 gttgcaggca ggccctgcga aggtggttgc tgttaaagcc gaagagtatg acgatgagtt
     8821 tctgtcatta gatttgaacg tcaaaatcgt cagcgatctt gacgatgcca tcgcccatat
     8881 tcgtgaacac ggcacacaac actccgatgc gatcctgacc tgcgatatgc gcaacgccca
     8941 gcgttttgtt aacgaagtgg attcgtccgc tgtttacgtt aacgcctcta cgcgttttac
     9001 cgacggcggc cagtttggtc tgggtgcgga agtggcggta agcacacaaa aactccacgc
     9061 gcgtggccca atggggctgg aagcactgac cacttacaag tggatcggca ttggtgatta
     9121 caccattcgt gcgtaaataa aaccgggtga tgcaaaagta gccatttgat tcacaaggcc
     9181 attgacgcat cgcccggtta gttttaacct tgtccaccgt gattcacgtt cgtgaacatg
     9241 tcctttcagg gccgatatag ctcagttggt agagcagcgc attcgtaatg cgaaggtcgt
     9301 aggttcgact cctattatcg gcaccattta aatcaataag ttacacatca ttagtacgtt
     9361 ccttatttct tgactgggac aaatttggga ccgatgggtt cagaatcgag tctatttgcc
     9421 gtgcgtgttc ggtaaggtga ttaggtgcga ggtgagcata tcgacgaacc atttcgatag
     9481 actcccagcc tcccatttcc tgtaacactg ataacgggac tccggcttga accagccaac
     9541 ttgcccaggt gtgtctcaag tcgtgaaatc tgaaatcatc aatacctgct cgtctcagcg
     9601 ccgctttcca ggctgtgttt gcgtcatacc gcatcttcct gactgttggc gctttcgttc
     9661 cgtctggttt ggtacagctt tccttataca caaataccca acggtgatga ttcccgattt
     9721 gttttttcaa tacgcgacat gcagtatcat tcagcgcaac gccaattgcg cggtttgatt
     9781 tactctcttc cgggtttatc catgccaccc ggcgctgcat gtctatttgt tgccattcaa
     9841 ggttgatgat gttcgagcgt cttaagcctg ttgcaagtgc aaattcaaca acagacttta
     9901 atggctccgg acattcatca atcagccttt gtgcttcatg aggctccagc cagcggatcc
     9961 gtttattctt tggttgaggc actttaataa ttggtgcctt atccagcatt ttccattcac
    10021 gctctgcggc tcttagcagg gcctttataa atgaaagatg cgtagccttc gttgcaacgg
    10081 acgctggttt tggcgtgtat tctggaacag gtttcccttt ttttctgcat gcttctgccc
    10141 tgagtttcca gttttcctca tgacgccggt tcgtcatttt ctgcattgct gaataaattt
    10201 ttgattcagt aatgtctctt agttgcattc ctgcgaaatg ttgaagccag aatccgatcc
    10261 ggcttttgtc atcgtccagt gattttttat gtgctttctc ttcaagccac ctgacacacg
    10321 cttcctcgaa cgttatatca ggaatttcac caagtttgct gacccgccat gcttcagcct
    10381 ttagcttgtc atggagttct gtcgcctgcc ttttgtcctt tgttccaaga gactgtttaa
    10441 atcttttacc gttcggcaat gtgaaactgg cgtaccatat ttcacctctg cggaagagtg
    10501 acattttctt tcctctgtta tgccatcacc cgcgctcacc tggacagtat gcagcggaga
    10561 ctgaagcgcc gcaatgcagg cttgtcgtgt tgtgaggtaa ggagatttat tcttagtggg
    10621 atctttgcgt gttgcctgca gacgccctgt gcgtatccag ttaatggcag tcggtctgga
    10681 tatcttgaga aaatgacagg cctcatctag cgtgaggctg tatggttcca ttatttcacc
    10741 tcttgctgtg atattgttga aaaatgaatg ccagctcgtt gttgccagac gatccaaccg
    10801 agagtcatat cccatgccat gtattcgtta tcgccgtttt ttgctctccg actatctact
    10861 aagccaccga aatgtttttc cataaataat tcataggatt cgcgttcatc tggctctact
    10921 tccagag
//
LOCUS       DADMJE010000141        10903 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.144, whole genome shotgun sequence.
ACCESSION   DADMJE010000141 DADMJE010000000
VERSION     DADMJE010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10903
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.144"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            14..184
                     /locus_tag="JN001_003238"
     CDS             14..184
                     /locus_tag="JN001_003238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001429095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lycopene biosynthesis protein"
                     /protein_id="HAY9054371.1"
                     /translation="MLQEKEYPITIYNIAPFNKNLWSLLKSSQECPPGESKITNKCLH
                     NSCIIKICSICY"
     gene            complement(252..1502)
                     /gene="icd"
                     /locus_tag="JN001_003239"
     CDS             complement(252..1502)
                     /gene="icd"
                     /locus_tag="JN001_003239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000444467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HAY9054372.1"
                     /translation="MESKVVVPAQGKKITLQNGKLNVPENPIIPYIEGDGIGVDVTPA
                     MLKVVDAAVEKAYKGERKISWMEIYTGEKSTQVYGQDVWLPAETLDLIREYRVAIKGP
                     LTTPVGGGIRSLNVALRQELDLYICLRPVRYYQGTPSPVKHPELTDMVIFRENSEDIY
                     AGIEWKADSADAEKVIKFLREEMGVKKIRFPEHCGIGIKPCSEEGTKRLVRAAIEYAI
                     ANDRDSVTLVHKGNIMKFTEGAFKDWGYQLAREEFGGELIDGGPWLKVKNPNTGKEIV
                     IKDVIADAFLQQILLRPAEYDVIACMNLNGDYISDALAAQVGGIGIAPGANIGDECAL
                     FEATHGTAPKYAGQDKVNPGSIILSAEMMLRHMGWTEAADLIVKGMEGAINAKTVTYD
                     FERLMEGAKLLKCSEFGEAIIENM"
     gene            1674..2327
                     /gene="rluE"
                     /locus_tag="JN001_003240"
     CDS             1674..2327
                     /gene="rluE"
                     /locus_tag="JN001_003240"
                     /EC_number="5.4.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309634.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(2457) synthase RluE"
                     /protein_id="HAY9054373.1"
                     /translation="MRQFIISENTMQKTSFRNHLVKRFSSQRSTRRKPENQPTRVILF
                     NKPYDVLPQFTDEAGRKTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPG
                     KRTGKIYYVQVEGIPTQDALEALRNGVTLNDGPTLPAGAELVDEPAWLWPRNPPIRER
                     KSIPTSWLKITLYEGRNRQVRRMTAHVGFPTLRLIRYAMGDYTLDNLANGEWREATE"
     gene            2337..2798
                     /gene="nudJ"
                     /locus_tag="JN001_003241"
     CDS             2337..2798
                     /gene="nudJ"
                     /locus_tag="JN001_003241"
                     /EC_number="3.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase NudJ"
                     /protein_id="HAY9054374.1"
                     /translation="MFKPHVTVACVVHAEGKFLVVEETINGKALWNQPAGHLEADETL
                     VEAAARELWEETGISAQPQHFIRMHQWIAPDKTPFLRFLFAIELEQICPTQPHDSDID
                     CCRWVSAEEILKASNLRSPLVAESIRCYQSGQRYPLEMIGDFNWPFTKGVI"
     gene            2852..3958
                     /gene="mnmA"
                     /locus_tag="JN001_003242"
     CDS             2852..3958
                     /gene="mnmA"
                     /locus_tag="JN001_003242"
                     /EC_number="2.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415651.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HAY9054375.1"
                     /translation="MSETAKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDD
                     GEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILC
                     NKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSH
                     EQIAQSLFPVGELEKPQVRKIAEDLGLVTAKKKDSTGICFIGERKFREFLGRYLPAQP
                     GKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQG
                     HEHPRLMSVGLIAQQLHWVDREPFTGTMRCSVKTRYRQTDIPCTVKALDDDRIEVIFD
                     EPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV"
     gene            3994..4635
                     /gene="hflD"
                     /locus_tag="JN001_003243"
     CDS             3994..4635
                     /gene="hflD"
                     /locus_tag="JN001_003243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="high frequency lysogenization protein HflD"
                     /protein_id="HAY9054376.1"
                     /translation="MAKNYYDITLALAGICQSARLVQQLAHQGHCDADALHVSLNSII
                     DMNPSSTLAVFGGSEANLRVGLETLLGVLNASSRQGLNAELTRYTLSLMVLERKLSSA
                     KGALDTLGNRINGLQRQLEHFDLQSETLMSAMAAIYVDVISPLGPRIQVTGSPAVLQS
                     PQVPAKVRATLLAGIRAAVLWHQVGGGRLQLMFSRNRLTTQAKQILAHLTPEL"
     gene            4639..6009
                     /gene="purB"
                     /locus_tag="JN001_003244"
     CDS             4639..6009
                     /gene="purB"
                     /locus_tag="JN001_003244"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006819529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HAY9054377.1"
                     /translation="MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWL
                     QKLAAHAAIKEVPAFAADAIGYLDAIVANFSEEDAARIKTIERTTNHDVKAVEYFLKE
                     KVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGIKDLAVQ
                     YRDIPLLSRTHGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNYNAHI
                     AAYPEVDWHQFSEEFVTSLGIQWNPYTTQIEPHDYIAELFDCVARFNTILIDFDRDVW
                     GYIALNHFKQKTIAGEIGSSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQ
                     RDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTV
                     MRRYGIEKPYEKLKELTRGKRVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAIT
                     MVDELK"
     gene            6177..6848
                     /gene="phoP"
                     /locus_tag="JN001_003245"
     CDS             6177..6848
                     /gene="phoP"
                     /locus_tag="JN001_003245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator PhoP"
                     /protein_id="HAY9054378.1"
                     /translation="MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHL
                     PDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTARESWQDKVEVLSAGADDYVTKP
                     FHIEEVMARMQALMRRNSGLASQVISLPPFQVDLSRRELSINDEVIKLTAFEYTIMET
                     LIRNNGKVVSKDSLMLQLYPDAELRESHTIDVLMGRLRKKIQAQYPQEVITTVRGQGY
                     LFELR"
     gene            6848..8308
                     /gene="phoQ"
                     /locus_tag="JN001_003246"
     CDS             6848..8308
                     /gene="phoQ"
                     /locus_tag="JN001_003246"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     PhoQ"
                     /protein_id="HAY9054379.1"
                     /translation="MKKLLRLFFPLSLRVRFLLATAAVVLVLSLAYGMVALIGYSVSF
                     DKTTFRLLRGESNLFYTLAKWENNKLHVELPENIDKQSPTMTLIYDENGQLLWAQRDV
                     PWLMKMIQPDWLKSNGFHEIEADVNDTSLLLSGDHSIQQQLQEVREDDDDAEMTHSVA
                     VNVYPATSRMPKLTIVVVDTIPVELKSSYMVWSWFIYVLSANLLLVIPLLWVAAWWSL
                     RPIEALAKEVRELEEHNRELLNPATTRELTSLVRNLNRLLKSERERYDKYRTTLTDLT
                     HSLKTPLAVLQSTLRSLRSEKMSVSDAEPVMLEQISRISQQIGYYLHRASMRGGTLLS
                     RELHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACK
                     YCLEFVEISARQTDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDTLRPGQGVGLAVAR
                     EITEQYEGKIVAGESMLGGARMEVIFGRQHSAPKDE"
     gene            8384..9505
                     /locus_tag="JN001_003247"
     CDS             8384..9505
                     /locus_tag="JN001_003247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309600.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HAY9054380.1"
                     /translation="MEYQLTLNWPDFLERHWQKRPVVLKRGFNNFIDPISPDELAGLA
                     MESEVDSRLVSHQDGKWQVSHGPFESYDHLGETNWSLLVQAVNHWHEPTAALMRPFRE
                     LPDWRIDDLMISFSVPGGGVGPHLDQYDVFIIQGTGRRRWRVGEKLQMKQHCPHPDLL
                     QVDPFEAIIDEELEPGDILYIPPGFPHEGYALENAMNYSVGFRAPNTRELISGFADYV
                     LQRELGGNYYSDPDVPPRAHPADVLPQEMDKLREMMLELINQPEHFKQWFGEFISQSR
                     HELDIAPPEPPYQPDEIYDALKQGDVLVRLGGLRVLRIGDDVYANGEKIDSPHRPALD
                     ALASNIALTAENFGDALEDPSFLAMLAALVNSGYWFFEG"
     gene            complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="JN001_003248"
     CDS             complement(9554..10780)
                     /gene="pepT"
                     /locus_tag="JN001_003248"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HAY9054381.1"
                     /translation="MDKLLERFLNYVSLDTQSKAGVRQVPSTEGQWKLLHLLKEQLEE
                     MGLINVTLSEKGTLMATLPANVPGDIPAIGFISHVDTSPDCSGKNVNPQIVENYRGGD
                     IALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGIAEIMTALAVLQQKNI
                     PHGDIRVAFTPDEEVGKGAKHFDVDAFDARWAYTVDGGGVGELEFENFNAASVNIKIV
                     GNNVHPGTAKGVMVNALSLAARIHAEVPADESPEMTEGYEGFYHLAGMKGTVERADMH
                     YIIRDFDRKQFEARKCKMMEIAKKVGKGLHPDCYIELVIEDSYYNMREKVVEHPHILD
                     IAQQAMRDCDIEPELKPIRGGTDGAQLSFMGLPCPNLFTGGYNYHGKHEFVTLEGMEK
                     AVQVIVRIAELTAQRK"
BASE COUNT         2696 a         2788 c         2726 g         2693 t
ORIGIN      
        1 taagcttggt attatccttc aggaaaaaga atatcctatt actatttata acattgcacc
       61 attcaacaag aatttatgga gtttactcaa aagcagtcaa gagtgtcctc caggagaaag
      121 caaaataaca aataaatgtt tacataatag ttgcattata aaaatatgct cgatatgcta
      181 ttaataatat ccacataaat aaaacaacgg gcgtgttata cgcccgtttc aatatttaac
      241 tcatggagag attacatgtt ttcgatgatc gcttcaccaa actctgaaca tttcagcagc
      301 ttagcgcctt ccatcagacg ttcaaagtca taagttacgg ttttcgcgtt gatagcacct
      361 tccatacctt taacaattaa atcagccgct tcagtccacc ccatatggcg cagcatcatc
      421 tcagcggaga ggatgataga gcctggattt actttgtcct gaccggcgta tttcggcgca
      481 gtaccgtggg tggcttcaaa cagggcgcat tcgtcaccga tgtttgctcc aggagcgata
      541 ccgataccgc caacctgcgc tgccagggcg tcagaaatgt agtcaccgtt caggttcata
      601 caggcgataa catcatattc agccggacgc agcaggatct gttgcaggaa tgcatcagca
      661 atcacgtctt taatgacgat ctctttgccg gtgttcgggt ttttaacttt cagccacggg
      721 ccgccgtcga tcagttcacc gccaaactct tcacgcgcca gctggtagcc ccagtcttta
      781 aacgcgcctt cggtgaactt catgatgttg cctttgtgca ccagagtcac agagtcacga
      841 tcgttagcaa ttgcgtattc gatcgctgca cgaaccagac gtttggtgcc ttcttccgaa
      901 cacggcttaa taccgatacc acaatgttcc gggaagcgaa ttttcttcac ccccatctct
      961 tcacgcagga atttaatcac tttctcggcg tcggcagagt ctgctttcca ttcgataccc
     1021 gcataaatgt cttccgagtt ttcacggaag ataaccatat cggtcagttc agggtgttta
     1081 accgggcttg gagtgccctg atagtaacgt accggacgca ggcagatgta gagatccagt
     1141 tcctggcgca gggcaacgtt cagagagcga ataccgccac caacaggagt ggtcagcgga
     1201 cctttaatgg caacgcgata ttcacgaatc agatcaaggg tttcagcagg cagccagaca
     1261 tcctgaccat aaacctgtgt ggatttttca ccggtgtaaa tttccatcca ggagatttta
     1321 cgctcgcctt tataggcttt ctcgactgca gcgtcgacca ctttcagcat ggctggggtt
     1381 acatctacac cgattccatc accttcaatg taagggataa tcggattttc aggaacgttg
     1441 agtttgccgt tttgcagggt gatcttcttg ccttgtgccg gaacaactac tttactttcc
     1501 attcacctct ccttcgagcg ctactggttt gctcgtctgc caccacgttg catatgcgtt
     1561 tgcgtcctgc gatacggatg ctttagagca attttttgtt aatgatttgt aattggcttg
     1621 tcaatactac cctattgttt gccgtcatga aagatgcgcg ttattaggct ataatgcggc
     1681 aattcataat ctctgaaaat accatgcaaa aaacttcttt tagaaatcac ctggttaagc
     1741 gattcagctc gcaacgttct accaggcgta aacctgaaaa ccagcccacg cgtgtgatcc
     1801 tgttcaataa accctacgat gttcttccgc agttcaccga tgaagccgga cgcaaaacat
     1861 taaaagaatt catcccggtt cagggcgttt atgcagcagg tcgtcttgac cgcgatagcg
     1921 aagggttact ggtgctgacc aataacggcg cgttgcaggc gcgtttaacc cagccgggca
     1981 aacgcaccgg gaaaatctat tatgtgcagg tggaaggtat tcccacacaa gacgcacttg
     2041 aagccttgcg caatggcgta accttaaatg atggccctac cctgcccgcc ggcgcggagc
     2101 tggttgacga accagcgtgg ttatggccgc ggaatccacc aattcgtgaa cgcaaaagta
     2161 ttcccaccag ctggctgaag atcaccttat atgaaggacg taatcgccag gtgcgccgca
     2221 tgaccgccca tgttggtttc cccacgctgc gactgattcg ttatgcgatg ggtgattaca
     2281 ctttggataa ccttgccaat ggcgaatggc gagaagcaac agaataagga tgcacaatgt
     2341 ttaaaccaca cgttaccgtt gcttgcgtag tgcacgcaga gggtaaattt ttagtcgttg
     2401 aagagacgat taatggtaaa gcgttatgga accaacctgc cgggcatctg gaagccgatg
     2461 aaaccttagt ggaagctgcc gcccgtgagc tatgggaaga aaccggcatc agcgcgcaac
     2521 cgcaacactt tattcgtatg catcagtgga ttgcgccaga taaaacgccg tttttgcgtt
     2581 tcctctttgc cattgagctt gagcaaatat gcccgaccca gcctcatgac agcgatatcg
     2641 actgctgtcg ttgggtcagc gccgaagaaa ttttaaaggc gtcaaatctt cgttcgccgc
     2701 tggtggcgga aagtatccgt tgttatcaaa gcgggcaacg ctatccgctg gagatgattg
     2761 gcgattttaa ctggcctttt acaaagggtg tcatctaaaa ggctgcgtga tagaatacgc
     2821 cgccttgaag ttcaatgtcg tgagtgatcc aatgtctgaa accgcaaaaa aagtaatcgt
     2881 cggcatgtcc ggcggtgtcg attcctccgt ttctgcctgg ctgttgcaac aacagggata
     2941 tcaggttgaa ggcctgttta tgaagaactg ggaagaagac gacggtgagg aatattgcac
     3001 agcggcagcg gatctggctg atgcccaagc tgtctgcgac aagctcggca ttgaactgca
     3061 caccgttaac tttgctgccg agtactggga caacgtcttc gaactgttcc ttgccgaata
     3121 taaagccggt cgcacgccga atccggatat tctgtgcaac aaagagatca aatttaaagc
     3181 tttcctcgaa tttgccgccg aagatttagg tgccgattat atcgctaccg gtcattacgt
     3241 acgtcgggcc gatgtcgatg gcaagagccg cctgctgcgt ggtctggaca gcaataaaga
     3301 ccagagctac ttcctttata cgctcagcca tgagcagatt gcgcaaagcc tgttcccggt
     3361 cggcgaactg gaaaaaccgc aggtgcgtaa gattgctgaa gatcttggtc tggtcaccgc
     3421 gaagaaaaaa gactctaccg gcatttgctt cattggcgaa cgtaaattcc gcgagttcct
     3481 gggccgttat ctcccggcgc aaccgggcaa aatcattacc gtcgatggcg atgaaattgg
     3541 tgagcaccag gggctgatgt atcacactct cggtcagcgt aaaggtctgg gtatcggtgg
     3601 caccaaagaa ggcaccgaag aaccgtggta tgtggtggac aaagacgtcg aaaacaacat
     3661 tctggttgtt gcgcagggcc atgaacaccc gcggctgatg tctgtcgggt tgattgccca
     3721 gcagttgcac tgggtcgatc gcgaaccatt caccggtact atgcgttgct cggtaaaaac
     3781 ccgctatcgc cagaccgata tcccttgcac cgtcaaggcg ctggacgatg atcgcattga
     3841 agtgattttc gatgaaccgg ttgccgccgt gacgccgggc cagtctgccg tcttctataa
     3901 cggtgaagtg tgcctcggtg gcggtattat tgagcagcgt ctgccgctgc cggtctgatt
     3961 attatcttta cttaaaacaa ggaagcagtg aacgtggcaa agaattacta tgacatcacc
     4021 ctcgccctgg ccggtatttg tcagtcggca cgcctggtgc aacaactcgc tcaccagggg
     4081 cattgtgatg ccgatgcgct acacgtctca ctcaacagta ttattgatat gaaccccagc
     4141 tcgacgctgg cggtttttgg cggtagcgaa gccaacctgc gcgtcgggct ggaaaccctg
     4201 ctcggcgtgc tcaatgccag cagtcgccag ggcttaaacg ccgaattaac ccgctacaca
     4261 ctcagcttga tggtgcttga gcgcaaactc tcctcagcga aaggcgcgct cgacactctg
     4321 ggcaaccgga tcaacggcct gcaacgccag ctcgaacact tcgatttaca gtccgaaacg
     4381 ctgatgagcg cgatggctgc tatctatgtt gatgtgatca gcccgcttgg cccgcgcatt
     4441 caggtcaccg gttcccctgc tgtactgcaa agcccacaag tgccggcgaa agttcgcgca
     4501 accctgctgg caggcattcg cgccgccgtg ctctggcacc aggtcggcgg cggacgtctg
     4561 caactgatgt tttctcgtaa tcgcctgacc actcaggcaa aacaaattct tgctcattta
     4621 accccggagt tgtgatctat ggaattatcc tcactgaccg ccgtttcccc tgtcgatgga
     4681 cgctacggcg ataaagtcag cgcgctgcgc gggattttca gcgaatatgg tttgctgaaa
     4741 ttccgtgtac aagttgaagt acgttggctg caaaaactgg ccgcgcacgc agcgatcaag
     4801 gaagttcctg cttttgctgc cgacgcaatc ggttaccttg atgcaattgt cgccaatttc
     4861 agcgaagaag atgccgcacg catcaaaacc atcgagcgta ccactaacca cgacgttaaa
     4921 gcggttgagt atttcctgaa agaaaaagtg gcggagatcc cggaactgca cgcggtttct
     4981 gaattcatcc actttgcctg tacttcggaa gatatcaata acctctccca cgcattaatg
     5041 ctgaaaaccg cgcgtgatga agtgatcctg ccgtactggc gtcaactgat tgatggcatt
     5101 aaagatctcg ccgttcagta ccgcgatatc ccgctgctgt ctcgtaccca cggtcagcca
     5161 gccacgccgt caaccatcgg taaagagatg gcaaacgtcg cctaccgtat ggagcgccag
     5221 taccgccagc ttaaccaggt ggagatcctc ggcaaaatca acggcgcggt cggtaactat
     5281 aacgcccaca tcgccgctta cccggaagtt gactggcatc agttcagcga agagttcgtc
     5341 acctcgctgg gtattcagtg gaacccgtac actacccaga ttgaaccgca cgactacatt
     5401 gccgaactgt ttgattgcgt tgcgcgcttc aacaccattc tgatcgactt tgaccgtgac
     5461 gtctggggtt atatcgccct taaccacttc aaacagaaaa ccattgctgg tgagattggt
     5521 tcttccacca tgccgcataa agttaacccg atcgacttcg agaactccga agggaatctg
     5581 ggcctttcca acgcggtatt acagcatctg gcaagcaaac tgccggtttc ccgctggcag
     5641 cgtgacctga ccgactccac cgtgctgcgt aacctcggcg tgggtatcgg ttatgcgctg
     5701 attgcgtatc aatccaccct gaaaggcgtg agcaaactgg aagtgaaccg tgaccatctg
     5761 ctggatgagc tggatcacaa ctgggaagtg ctggctgagc caatccagac agttatgcgt
     5821 cgctatggca tcgaaaaacc gtacgagaag ctgaaagagc tgactcgtgg taagcgcgtt
     5881 gacgccgaag gcatgaagca gtttatcgac ggtctggcgt tgccagaaga agagaaagcc
     5941 cgcctgaaag cgatgacgcc ggcaaactac attggtcgcg ccatcaccat ggttgatgag
     6001 ctgaaataaa ctcgtatcag tgccggatgg cgatgctgtc cggcctgctt attaagatta
     6061 tccgcttttt attttttcac tttacctccc ctccccgctg gtttatttaa tgtttacccc
     6121 cataaccaca taatcgcgtt acactatttt aataattaag acagggagaa ataaaaatgc
     6181 gcgtactggt tgttgaagac aatgcgttgt tacgtcacca ccttaaagtt cagattcagg
     6241 atgctggtca tcaggtcgat gatgcagaag atgccaaaga agccgattat tatctcaatg
     6301 aacatttacc ggatattgcg attgtcgatc tcggattgcc agacgaggac ggtctgtcac
     6361 tgattcgccg ctggcgtagc aatgatgttt cactgccgat tctggtatta accgcccgtg
     6421 aaagctggca ggacaaagtc gaagtattaa gtgctggtgc tgatgattac gtgactaaac
     6481 catttcatat tgaagaggtg atggcgcgaa tgcaggcatt aatgcggcgt aatagcggtc
     6541 tggcttcaca ggtcatttcg ctaccaccgt ttcaggttga tctctctcgc cgtgaattat
     6601 ctattaatga cgaagtgatc aaactgaccg cgttcgaata caccattatg gaaacgttga
     6661 tacgcaataa tggcaaagtg gtgagcaaag attcgttaat gctccaactc tatccggatg
     6721 cggagctgcg ggaaagccat accattgatg tactgatggg acgtctgcgc aaaaaaattc
     6781 aggcacaata tccgcaagaa gtgattacta ccgttcgcgg ccagggctat ttgttcgaat
     6841 tgcgctgatg aaaaaattac tgcgtctttt tttcccgctc tcgctgcggg tacgttttct
     6901 gttggcaacg gctgcggtag tactggtgct ttcgcttgcc tacggaatgg tcgcgctgat
     6961 cggttatagc gtcagtttcg ataaaactac gtttcggctg ttacgtggcg agagcaatct
     7021 gttctatacc cttgcgaagt gggaaaacaa taagttgcat gtcgagttac ccgaaaatat
     7081 cgacaagcaa agccccacca tgacgctaat ttatgatgag aacgggcagc ttttatgggc
     7141 gcaacgtgac gtgccctggc tgatgaagat gatccagcct gactggctga aatcgaatgg
     7201 ttttcatgaa attgaagcgg atgttaacga taccagcctc ttgctgagtg gagatcattc
     7261 gatacagcaa cagttgcagg aagtgcgaga agatgatgac gacgcggaga tgacccactc
     7321 ggtggcagta aacgtctacc cggcaacatc gcggatgcca aaattaacca ttgtggtggt
     7381 ggataccatt ccggtggagc taaaaagttc ctatatggtc tggagctggt ttatctatgt
     7441 gctctcagcc aatctgctgt tagtgatccc gctgctgtgg gtcgccgcct ggtggagttt
     7501 acgccccatc gaagccctgg caaaagaagt ccgcgaactg gaagaacata accgcgaatt
     7561 gctcaatcca gccacaacgc gagaactgac cagtctggta cgaaacctga accgattgtt
     7621 aaaaagtgaa cgcgaacgtt acgacaaata ccgtacgacg ctcaccgacc tgacccatag
     7681 tctgaaaacg ccactggcgg tgctgcaaag tacgctgcgt tctctgcgta gtgaaaagat
     7741 gagcgtcagt gatgctgagc cggtaatgct ggagcaaatc agccgcattt cacagcaaat
     7801 tggctactac ctgcatcgtg ccagtatgcg cggcgggaca ttgctcagcc gcgagctgca
     7861 tccggtcgcc ccactgctgg acaatctcac ctcagcgctg aacaaagtgt atcaacgcaa
     7921 aggggtcaat atctctctcg atatttcgcc agagatcagc tttgtcggtg agcagaacga
     7981 ttttgtcgag gtgatgggca acgtgctgga taatgcctgt aaatattgcc tcgagtttgt
     8041 cgaaatttct gcaaggcaaa ccgacgagca tctctatatt gtggtcgagg atgatggccc
     8101 cggtattcca ttaagcaagc gagaggtcat tttcgaccgt ggtcaacggg ttgatacttt
     8161 acgccctggg caaggtgtag ggctggcggt agcccgcgaa atcaccgagc aatatgaggg
     8221 taaaatcgtc gccggagaga gcatgctggg cggtgcgcgg atggaggtga tttttggtcg
     8281 ccagcattct gcgccgaaag atgaataaat atgtccatac ttcacgcatt acgttaagca
     8341 tccgttataa tcggttgcag ataccagcct gtggatgctt aacatggaat accaactcac
     8401 tcttaactgg cccgattttc ttgaacgtca ctggcagaaa cgcccggtgg tgttaaaacg
     8461 cggctttaat aattttattg acccgatctc tccagacgag ttggcgggtc tggcgatgga
     8521 aagcgaagtt gacagtcgac tggtcagtca ccaggatggc aaatggcagg tcagccacgg
     8581 cccgttcgaa agctacgatc atctcggtga aaccaactgg tcattactgg tacaggcagt
     8641 gaaccactgg catgagccga ccgccgcgct gatgcgaccg ttccgtgaac taccggactg
     8701 gcgtattgat gatctgatga tttctttttc tgtacctggc ggcggcgtcg gcccgcatct
     8761 cgatcagtac gacgtgttta tcattcaggg taccggacgt cgtcgctggc gagtgggcga
     8821 aaagctgcaa atgaaacagc actgcccaca tccggatctg ttacaggtcg atccgttcga
     8881 agccatcatc gatgaagagc tggagcctgg tgatattctt tatattccgc caggattccc
     8941 gcatgaaggc tacgcgctgg aaaatgcgat gaactattcc gtgggctttc gcgcgccaaa
     9001 tacgcgggaa ctgattagtg gatttgccga ttatgtgctg caacgtgaac tgggcggcaa
     9061 ctactacagc gatcctgatg ttccacctcg cgctcatcct gcggatgttc tgcctcaaga
     9121 gatggataaa ctgcgtgaga tgatgctcga attgatcaac cagccggaac actttaagca
     9181 atggtttggc gagtttatat cccagtcacg tcatgaactg gatatcgcgc cgccggaacc
     9241 gccttatcag ccagatgaaa tctacgatgc gctgaaacaa ggtgatgtgc tggtgcgcct
     9301 gggtggtctg cgcgtattgc gcattggcga cgacgtgtat gccaatggtg agaagatcga
     9361 ttccccgcac cgtccggcac tggatgcact cgccagcaac attgcgctga ctgcggagaa
     9421 ttttggcgat gcgctggaag atccgtcatt cctcgcgatg ctcgcggcgc tggtcaatag
     9481 cgggtattgg ttcttcgaag ggtaagtttg gatttaagcc ggatgcggca tcacatgccg
     9541 catccctttt cgcttacttc cgttgcgccg ttaactcggc aatacggacg atcacctgca
     9601 ccgctttttc cataccttcc agagtcacaa actcatgctt accatgatag ttgtaaccgc
     9661 cagtgaacaa gttcgggcac ggtaatccca taaacgacaa ctgcgcgccg tcggtaccgc
     9721 cgcggatcgg tttcagttcc ggttcaatat cgcagtcacg cattgcctgc tgggcgatat
     9781 cgagaatatg cggatgctca accactttct cgcgcatatt gtagtaactg tcttcaatca
     9841 ccagttcaat gtagcaatca ggatgtaacc ctttgcccac ttttttggcg atctccatca
     9901 ttttacattt acgcgcttca aactgtttac ggtcgaaatc acggatgatg tagtgcatat
     9961 cggcccgttc aacggtgcct ttcatgcccg ccaggtgata gaaaccttca tagccttctg
    10021 tcatttccgg gctttcatcc gccggaactt ccgcatgaat acgtgccgcc agcgacagcg
    10081 catttaccat cactcctttc gccgtgcccg gatgaacatt gttaccgaca attttgatat
    10141 tgaccgatgc ggcgttgaag ttttcaaact ccagttcgcc tacgccacca ccgtcaacag
    10201 tgtaagccca gcgggcatcg aaggcatcaa catcaaaatg tttcgcccct ttgcccactt
    10261 cttcatccgg ggtaaaggcg acgcgaatat caccatgcgg aatgtttttc tgttgcaata
    10321 ccgccagcgc ggtcatgatt tctgcaatac ctgctttgtc atcggcacct aacaaggttt
    10381 taccatcggt ggtaatcaat gtctgaccca gtagctgatg cagcaccggg aacataaccg
    10441 gtgataaaac ttcatcgccg atacccagcg caatatcgcc accgcgatag ttttcaacaa
    10501 tttgcggatt aacatttttg ccgctgcaat ccggtgaggt atccacatga gaaataaagc
    10561 caatcgccgg gatatcgcca gggacgttag ccggtaacgt cgccatcaaa gtgcccttct
    10621 cacttaaggt cacattgata agccccattt cttcgagctg ctctttcagc agatgcaata
    10681 acttccattg gccttccgtg ctgggaacct gtctcacccc tgcttttgat tgggtatcca
    10741 gagacacgta gttcaaaaat cgctcaagta gtttatccat gtagtcaccc tcactttttg
    10801 tgacaacatt attaagaagc aagaaaagac aaatattgcg tcaggtcact tttacccctg
    10861 caagcgggaa tatttatcag cattacctta atgaatataa agc
//
LOCUS       DADMJE010000142        10897 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.145, whole genome shotgun sequence.
ACCESSION   DADMJE010000142 DADMJE010000000
VERSION     DADMJE010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10897
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.145"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(228..2087)
                     /gene="gss"
                     /locus_tag="JN001_003249"
     CDS             complement(228..2087)
                     /gene="gss"
                     /locus_tag="JN001_003249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutathionylspermidine
                     amidase/synthase"
                     /protein_id="HAY9054382.1"
                     /translation="MSKGTTSQDAPFGTLLGYAPGGVAIYSSDYSSLDPQEYEDDAVF
                     RSYIDDEYMGHKWQCVEFARRFLFLNYGVVFTDVGMAWEIFSLRFLREVVNDNILPLQ
                     AFPNGSPRAPVAGALLIWDKGGEFKDTGHVAIITQLHGNKVRIAEQNVIHSPLPQGQQ
                     WTRELEMVVENGCYTLKDTFDDTTILGWMIQTEDTEYSLPQPEIAGELLKISGARLEN
                     KGQFDGKWLDEKDPLQNAYVQANGQVINQDPYHYYTITESAEQELIKATNELHLMYLH
                     ATDKVLKDDNLLALFDIPKILWPRLRLSWQRRRHHMITGRMDFCMDERGLKVYEYNAD
                     SASCHTEAGLILERWAEQGYKGNGFNPAEGLINELAGAWKHSRARPFVHIMQDKDIEE
                     NYHAQFMEQALHQAGFETRILRGLDELGWDAAGQLIDGEGRLVNCVWKTWAWETAFDQ
                     IREVSDREFAAVPIRTGHPQNEVRLIDVLLRPEVLVFEPLWTVIPGNKAILPILWSLF
                     PHHRYLLDTDFTVNDELVKTGYAVKPIAGRCGSNIDLVSHHEEVLDKTSGKFAEQKNI
                     YQQLWCLPKVDGKYIQVCTFTVGGNYGGTCLRGDESLVIKKESDIEPLIVVKK"
     gene            2292..3158
                     /gene="yghU"
                     /locus_tag="JN001_003250"
     CDS             2292..3158
                     /gene="yghU"
                     /locus_tag="JN001_003250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311901.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-dependent disulfide-bond
                     oxidoreductase"
                     /protein_id="HAY9054383.1"
                     /translation="MTDNTYQPAKVWTWDKSAGGAFANINRPVSGPTHEKTLPVGKHP
                     LQLYSLGTPNGQKVTIMLEELLALGVTGAEYDAWLIRIGDGDQFSSGFVEVNPNSKIP
                     ALRDHTHNPPICVFESGSILLYLAEKFGYFLPQDLAKRTETMNWLFWLQGAAPFLGGG
                     FGHFYHYAPVKIEYAINRFTMEAKRLLDVLDKQLAQHKFVAGDEYTIADMAIWPWFGN
                     VVLGGVYDAAEFLDAGSYKHVQRWAKEVGERPAVKRGRIVNRTNGPLNEQLHERHDAS
                     DFETNTEDKRQG"
     gene            complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JN001_003251"
     CDS             complement(3281..3529)
                     /gene="hybG"
                     /locus_tag="JN001_003251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation factor HybG"
                     /protein_id="HAY9054384.1"
                     /translation="MCIGVPGQVLAVGEDIHQLAQVEVCGIKRDVNIALICEGNPADL
                     LGQWVLVHVGFAMSIIDEDEAKATLDALRQMDYDITSA"
     gene            complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JN001_003252"
     CDS             complement(3542..3883)
                     /gene="hypA"
                     /locus_tag="JN001_003252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase maturation nickel metallochaperone
                     HypA"
                     /protein_id="HAY9054385.1"
                     /translation="MHELSLCQSAVEIIQRQAEQHDVKRVTAVWLEIGALSCVEESAV
                     RFSFEIVCHGTVAQGCDLHIVYKPAQAWCWDCSQVVEIHQHDAQCPLCHGERLRVDTG
                     DSLIVKSIEVE"
     gene            complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JN001_003253"
     CDS             complement(3876..4364)
                     /gene="hybE"
                     /locus_tag="JN001_003253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-2 assembly chaperone"
                     /protein_id="HAY9054386.1"
                     /translation="MTEEIAGFQTSPKAQVQAAFEEIARRSMHDLSFLHPSMPVYVSD
                     FTLFEGQWTGCVITPWMLSAVIFPGPDQLWPLRKVSEKIGLQLPYGTMTFTVGELDGV
                     SQYLSCSLMSPLSHSMSIEEGQRLTDDCARMILSLPVTNPDVPHAGRRALLFGRRSGE
                     NA"
     gene            complement(4357..4851)
                     /locus_tag="JN001_003254"
     CDS             complement(4357..4851)
                     /locus_tag="JN001_003254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HyaD/HybD family hydrogenase maturation
                     endopeptidase"
                     /protein_id="HAY9054387.1"
                     /translation="MRILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTA
                     GMELLGDMANRDHLIIADAIVSKKNTPGTMMILRDEEVPALFTNKISPHQLGLADVLS
                     ALRFTGEFPKKLTLVGVIPESLEPHIGLTPTVEAMIEPALEQVLAALRESGVEAIPRE
                     AIHD"
     gene            complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JN001_003255"
     CDS             complement(4851..6554)
                     /gene="hybC"
                     /locus_tag="JN001_003255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 large subunit"
                     /protein_id="HAY9054388.1"
                     /translation="MSQRITIDPVTRIEGHLRIDCEIENGVVSKAWASGTMWRGMEEI
                     VKNRDPRDAWMIVQRICGVCTTTHALSSVRAAESALNIDVPVNAQYIRNIILAAHTTH
                     DHIVHFYQLSALDWVDITSALQADPTKASEMLKGVSTWHLNSPEEFTKVQNKIKDLVA
                     SGQLGIFANGYWGHPAMKLPPEVNLIAVAHYLQALECQRDANRVVALLGGKTPHIQNL
                     AVGGVANPINLDGLGVLNLERLMYIKSFIDKLSDFVEQVYKVDTAVIAAFYPEWLTRG
                     KGAVNYLSVPEFPTDSKNGSFLFPGGYIENADLSSYRPITSHSDEYLIKGIQESAKHS
                     WYKDEAPQAPWEGTTIPAYDGWSDDGKYSWVKSPTFYGKTVEVGPLANMLVKLAAGRE
                     STQNKLNEIVAIYQKLTGNTLEVAQLHSTLGRIIGRTVHCCELQDILQNQYSALITNI
                     GKGDHTTFVKPNIPATGEFKGVGFLEAPRGMLSHWMVIKDGIISNYQAVVPSTWNSGP
                     RNFNDDVGPYEQSLVGTPVADPNKPLEVVRTIHSFDPCMACAVHVVDADGNEVVSVKV
                     L"
     gene            complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JN001_003256"
     CDS             complement(6551..7729)
                     /gene="hybB"
                     /locus_tag="JN001_003256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ni/Fe-hydrogenase cytochrome b subunit"
                     /protein_id="HAY9054389.1"
                     /translation="MSHDPQPLGGKIISKPVMIFGPLIVICMLLIVKRLVFGLGSVSD
                     LNGGFPWGVWIAFDLLIGTGFACGGWALAWAVYVFNRGQYHPLVRPALLASLFGYSLG
                     GLSITIDVGRYWNLPYFYIPGHFNVNSVLFETAVCMTIYIGVMALEFAPALFERLGWK
                     VSLKRLNKVMFFIIALGALLPTMHQSSMGSLMISAGYKVHPLWQSYEMLPLFSLLTAF
                     IMGFSIVIFEGSLVQAGLRGNGPDEKSLFVKLTNTISVLLAIFIVLRFGELIYRDKLS
                     LAFAGDFYSVMFWIEVLLMLFPLVVLRVAKLRNDSRMLFLSALSALLGCATWRLTYSL
                     VAFNPGGGYAYFPTREELLISIGFVAIEICAYIVLIRLLPILPPLKQNDHNRHEASKA
                     "
     gene            complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JN001_003257"
     CDS             complement(7719..8705)
                     /gene="hybA"
                     /locus_tag="JN001_003257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 operon protein HybA"
                     /protein_id="HAY9054390.1"
                     /translation="MNRRNFIKAASCGALLTGALPSVSHAAAENRPPIPGSLGMLYDS
                     TLCVGCQACVTKCQDINFPERNPQGEQTWSNNDKLSPYTNNIIQVWTSGTGVNKDQEE
                     NGYAYIKKQCMHCVDPNCVSVCPVSALKKDPKTGIVHYDKDVCTGCRYCMVACPYNVP
                     KYDYNNPFGALHKCELCNQKGVERLDKGGLPGCVEVCPAGAVIFGTREELMAEAKKRL
                     ALKPGSEYHYPRQTLKSGDTYLHTVPKYYPHLYGEKEGGGTQVLVLTGVPYENLDLPK
                     LDDLSTGARSENIQHTLYKGMMLPLAVLAGLTVLVRRNTKNDHHDGGDDHES"
     gene            complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JN001_003258"
     CDS             complement(8708..9826)
                     /gene="hybO"
                     /locus_tag="JN001_003258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 2 small subunit"
                     /protein_id="HAY9054391.1"
                     /translation="MTGDNTLIHSHGINRRDFMKLCAALAATMGLSSKAAAEMAESVT
                     NPQRPPVIWIGAQECTGCTESLLRATHPTVENLVLETISLEYHEVLSAAFGHQVEENK
                     HNALEKYKGQYVLVVDGSIPLKDNGIYCMVAGEPIVDHIRKAAEGAAAIIAIGSCSAW
                     GGVAAAGVNPTGAVSLQEVLPGKTVINIPGCPPNPHNFLATVAHIITYGKPPKLDDKN
                     RPTFAYGRLIHEHCERRPHFDAGRFAKEFGDEGHREGWCLYHLGCKGPETYGNCSTLQ
                     FCDVGGVWPVAIGHPCYGCNEEGIGFHKGIHQLANVENQTPRSQKPDVNAKEGGNVSA
                     GAIGLLGGVVGLVAGVSVMAVRELGRQQKKDNADSRGE"
     gene            complement(10015..10302)
                     /locus_tag="JN001_003259"
     CDS             complement(10015..10302)
                     /locus_tag="JN001_003259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2623 domain-containing protein"
                     /protein_id="HAY9054392.1"
                     /translation="MNNHFGKGLMAGLKATHADSAVNVTKFCADYKRGFVLGYSHRMY
                     EKTGDRQLSAWEAGILTRRYGLDKEMVMDFFRENNSCSTLRFFMAGYRLEN"
     gene            complement(10421..10897)
                     /locus_tag="JN001_003260"
                     /pseudo
     CDS             complement(10421..10897)
                     /locus_tag="JN001_003260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311911.3"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="dienelactone hydrolase family protein"
BASE COUNT         2660 a         2988 c         2692 g         2557 t
ORIGIN      
        1 caaagtgaaa tatcattttt taacgataaa aagagtgtta tttcttgtgt atcagacaat
       61 aagcattcat tcaaaacctt tagaaataat caaaacacag gtattccact ggttaatata
      121 ttcacatatg aaatgaataa atattagaac atataaatat tgaatatttt gattaatccc
      181 cgtactgatt attcttcata atcagtacgg ggttgctaca acatgtatta ctttttcacc
      241 acaattaacg gttcaatatc actctctttt ttgatgacca gtgattcatc accgcgcaaa
      301 cacgtcccac cgtagttgcc gcccacggtg aaggtacata cctgaatgta tttaccgtcc
      361 actttcggca aacaccacag ttgctgatag atgtttttct gctcggcaaa tttaccgctg
      421 gttttgtcca gcacctcttc atgatggctg accaggtcga tattgctacc acagcgaccg
      481 gcaatcggtt tcactgcgta acctgttttc accaattcat cattaacagt gaaatcggta
      541 tccagcaggt aacgatggtg cgggaacagc gaccagagga tcggcagaat cgctttgttg
      601 ccggggatca ccgtccacag cggctcaaag actagcactt ccgggcgcag caatacgtcg
      661 ataagacgca cttcgttttg cggatgaccg gtacggattg gcaccgcagc aaactcacgg
      721 tcgctaactt cacgaatctg atcaaacgcg gtttcccacg cccaggtttt ccacacgcag
      781 ttaaccagtc gcccttcccc atcaatcagt tgcccggcag catcccagcc cagttcatcc
      841 aatccacgca agatacgcgt ttcaaagccc gcctggtgca gcgcctgctc cataaactgc
      901 gcgtgatagt tttcctcgat atctttgtcc tgcatgatat ggacaaacgg acgtgcacga
      961 ctgtgtttcc aggcaccagc caattcgtta atcagccctt ccgccggatt gaagccgttg
     1021 cctttatagc cctgctccgc ccaacgttcg aggatcaagc ccgcttcggt atgacaggag
     1081 gcggagtcgg cgttgtactc gtaaaccttc aggccacgct catccatgca gaaatccata
     1141 cgaccagtga tcatatggtg acggcgacgc tgccaggaga gacgcaaacg tggccagagg
     1201 attttcggaa tgtcgaacag cgccagcagg ttgtcatctt tcagtacctt gtcggttgcg
     1261 tgaagataca tcaggtgcag ctcgttggtg gctttaatta gctcctgctc ggcactctcg
     1321 gtaatggtgt agtaatgata aggatcctga ttgatcacct gaccgttggc ctgcacatag
     1381 gcgttttgca gcggatcttt ttcatccagc catttaccgt caaactggcc tttgttttcc
     1441 aggcgcgctc cgctgatttt cagcagctcg cctgcaattt ccggctgcgg taagctgtat
     1501 tcagtatctt ccgtctggat catccagccc agaatggtgg tgtcatcaaa agtgtctttc
     1561 agggtatagc agccgttttc gaccaccatc tccagctcac gcgtccactg ttgcccttgc
     1621 ggcaacgggg aatgaatcac gttctgttcc gcaatacgga ctttgttgcc atgcaattgg
     1681 gtaatgatgg cgacatggcc agtgtcttta aattcaccgc ctttatccca gataagaagc
     1741 gcacccgcga ccggcgcacg cggcgagccg ttaggaaatg cctgcaatgg caggatgttg
     1801 tcattaacca cttctcgcag gaagcgcagc gagaaaatct cccacgccat acccacgtca
     1861 gtaaagacca caccgtaatt cagaaagaga aaacggcgag caaattcaac gcattgccac
     1921 ttgtggccca tatattcgtc gtcgatatag ctacggaata cggcgtcatc ttcgtattcc
     1981 tgcggatcga gagaactgta atctgaagag tagattgcta ccccacctgg ggcgtagccc
     2041 aataatgtcc cgaacggggc atcctggctg gtcgttcctt tgctcatcac tttaccttta
     2101 acaatacaac ctaagcagtt ggcgtaattg ttgtgctctg attacctgct cagcgacatt
     2161 aaccggacag aggtcagact aatcatacac ctcatcgcag cggctggcgc aaagggttaa
     2221 aaaattcaca ttctgtacag caagtgacct gccacactgc ttcaacacta ccactcagaa
     2281 ggcaactcac tatgacagac aatacttatc agcccgcgaa agtctggacg tgggataaat
     2341 ccgctggcgg cgcgttcgcc aatattaatc gcccggtttc tggtccgacg catgaaaaaa
     2401 cgctgcccgt tggcaaacac ccattgcaac tttattcgct gggaacgccg aacggtcaga
     2461 aagtaacgat tatgcttgag gagctgctgg cgctgggcgt tactggtgca gagtacgacg
     2521 cctggctgat tcgtattggc gatggcgatc aattctccag cggctttgtc gaagtgaacc
     2581 caaactcgaa gatcccggcg ctgcgcgatc atacgcataa tccgccgatc tgtgtgtttg
     2641 aatctggttc gatcctgctt tatctggcgg agaaatttgg ctacttcctg ccgcaggatt
     2701 tggcaaagcg tactgaaacg atgaactggc tgttctggtt acagggcgcg gcaccgttcc
     2761 tcggcggtgg ttttggtcac ttttaccatt acgcaccggt aaagattgag tacgccatca
     2821 accgctttac catggaagcc aaacgtctgc tcgacgtgct ggataagcaa ctggcgcagc
     2881 ataagtttgt tgcgggcgat gagtacacca ttgcggatat ggcgatttgg ccgtggtttg
     2941 gcaacgtggt gttaggtggt gtgtatgatg ccgctgagtt tcttgatgcg ggcagttata
     3001 agcatgtaca acgctgggcg aaagaagtag gcgaacgtcc ggcggtgaaa cgtgggcgta
     3061 ttgttaaccg caccaacgga ccgctgaatg agcagttgca tgagcgccat gacgccagtg
     3121 atttcgagac gaatacggaa gataagcgtc aggggtaagg gttggtgttc gtcgcagcaa
     3181 gccatccagg ccggataagg cgttcacgcc gcatccggca atcgtgcaca atgcctgatg
     3241 cgacgctgcc gcgtcttatc aggcctacga aagctaatca tcacgcgctg gtaatgtcgt
     3301 aatccatttg gcgcagtgcg tctaatgtgg ctttggcttc atcttcgtcg atgatgctca
     3361 tggcaaatcc gacgtgtacc agcacccact ggcccagtag atcggcaggg ttaccttcac
     3421 aaatcagggc gatattcacg tcgcgcttga taccacatac ttcaacctgc gcaagctggt
     3481 gaatatcttc accgacagcc agcacctggc ctggaacgcc aatacacatt attaactccg
     3541 gttattcaac ttcaatactt ttgacgatca gcgaatcgcc ggtatcgaca cgcaaccgct
     3601 cgccgtgaca gagcggacac tgcgcatcgt gctgatgaat ctccaccacc tggctgcaat
     3661 cccagcacca ggcctgggcg ggtttataga cgatatgtaa atcgcaccct tgagccaccg
     3721 ttccgtggca gacaatttca aaactaaaac ggacggcgct ctcctcaacg caggagagcg
     3781 cgccaatttc cagccacacg gcggtgacgc gcttaacatc gtgctgctcc gcctgccgtt
     3841 ggataatttc aacggcgctc tggcaaagcg acaactcatg cattttcgcc actcctgcga
     3901 ccaaacagca gggcgcgacg ccctgcgtgt ggtacatccg gattcgtgac tggcagcgaa
     3961 aggatcattc gtgcgcagtc atccgtcagg cgttggccct cttcaatcga catactgtgc
     4021 gaaagcggtg acatcagcga acaggagagg tattgcgaaa caccgtccag ttcgccaacg
     4081 gtaaaggtca tggtgccata cggcagttgc agaccaattt tttcactcac tttgcgcagc
     4141 ggccagagtt gatccgggcc ggggaagata actgcactca gcatccacgg ggtgatcaca
     4201 caccccgtcc actgaccttc gaacagcgta aaatcagaaa catacaccgg cattgaagga
     4261 tgcagaaaag agagatcgtg catcgaacgc cgggcaattt cttcaaacgc tgcctgtact
     4321 tgcgccttcg gggaggtctg gaaacctgct atctcttcag tcatgaatcg cctcccgtgg
     4381 gatggcttcc acgcctgatt cgcgcagcgc agccagaacc tgctcaagcg caggttcaat
     4441 cattgcttca accgtcggcg ttaagccgat gtgtggctcc agcgattccg ggatcacgcc
     4501 gaccagggtc agctttttcg gaaactcacc ggtgaagcgc agggccgaca atacgtcggc
     4561 caggccaagc tgatgcggag agattttgtt ggtaaacaac gccggaactt cttcatcccg
     4621 caggatcatc atcgttcccg gcgtgttctt tttcgacaca atggcatccg caataatcag
     4681 atgatcgcga tttgccatgt cgccaagcag ctccattccc gccgtgccgc catcgaggat
     4741 ctcaacataa tccggcagaa tgtatcgttg ctctaacgct tcgacaatcc gcacaccgat
     4801 ggcttcatcg gtcagcaaaa tattgccgac ccctaagact aaaatacgca ttacagaacc
     4861 ttcactgaaa ccacttcgtt gccgtcggca tccactacgt gtaccgcaca ggccatgcac
     4921 gggtcgaagg agtgaatggt acgcaccact tccagcggtt tattcggatc agcaaccggt
     4981 gtacccacca gcgactgctc gtaaggaccg acgtcatcat tgaagttacg cggaccagag
     5041 ttccaggttg atggaacaac tgcctggtag ttactgataa taccgtcttt aataaccatc
     5101 cagtgagaga gcataccgcg cggcgcttcg aggaagccaa cacctttgaa ctcacccgtt
     5161 gccggaatgt tcggtttcac aaaggtggtg tgatcgcctt tgccgatatt ggtgatcagt
     5221 gcactgtatt gattttgcag gatatcctgc aattcgcagc agtgaacggt acgaccaata
     5281 atacggccca gcgtggagtg cagctgcgcc acttccagcg tgttgccagt cagtttctga
     5341 taaatcgcaa cgatttcatt cagtttgttc tgggtagatt cgcgacctgc cgccagtttc
     5401 accagcatat tagccagcgg acccacttct accgttttgc cgtagaaagt cggtgatttc
     5461 acccaggaat atttcccgtc gtcagaccaa ccatcataag ccggaatggt ggtaccttcc
     5521 cacggtgcct gcggcgcttc gtctttatac caggagtgct tcgcgctttc ctgaatgcct
     5581 ttgatcaggt attcatcgga atgagaagtg atcggacgat acgaggacag atccgcattc
     5641 tcaatgtagc cgcccgggaa caggaagctg ccgtttttac tgtcggtcgg gaattccggc
     5701 acgctcaggt agttcaccgc acctttaccg cgcgtcagcc attccgggta gaacgcggca
     5761 ataactgcgg tatcaacctt ataaacctgt tcaacaaagt cgctcagctt gtcgatgaaa
     5821 gacttgatgt acatcaggcg ctcaaggttc agcacgccca aaccgtcgag gttgatcggg
     5881 ttcgcgacac cacctaccgc caggttctga atgtgcggcg ttttaccgcc cagcagcgcc
     5941 acgacgcggt tagcgtcacg ctggcactcc agcgcctgca ggtagtgcgc taccgcaatc
     6001 aggttcactt ccggcggcag tttcatcgcc gggtgacccc agtagccatt ggcgaaaata
     6061 cccaactgac cgctggcaac cagatctttg atcttgttct gaactttagt gaactcttcc
     6121 ggactgttca gatgccaggt cgaaacgcct ttcagcattt cggaggcttt ggttgggtca
     6181 gcttgcagtg cagaagtgat gtccacccag tccagcgccg aaagctgata gaaatgaacg
     6241 atatggtcat gcgtggtgtg cgcagccaga atgatgttac ggatgtattg cgcgttaacc
     6301 ggaacgtcga tattcagcgc actttctgcc gcacgaacgg aagacagcgc gtgagtggta
     6361 gtacatacgc cacagatacg ttgcacaatc atccatgcat cgcgcggatc gcggtttttc
     6421 acgatctctt ccatgccgcg ccacatggta ccggaagccc atgctttcga aacgacgcca
     6481 ttttcgattt cgcaatcgat gcgtaaatgc ccctcaatac gggttaccgg atcaatagta
     6541 attctctggc tcatgctttg ctcgcctcat gacgattatg atcgttttgt tttaaaggag
     6601 gaagtatcgg cagtagacga atgagtacga tgtaagcgca aatctcaata gccacaaaac
     6661 caatagaaat caacagttct tccctggtcg ggaagtaggc gtaaccgccg cccgggttga
     6721 atgccaccag cgaataggtc agacgccagg ttgcacaacc taacagtgcg ctcagtgctg
     6781 acaggaacag catgcgggaa tcattacgca gcttcgccac acgcagaacg accagcggga
     6841 agagcatcag caggacttca atccagaaca tcacggagta gaagtcaccg gcaaacgcta
     6901 acgacagctt gtcgcgatag ataagctcgc caaagcgcag cacgataaaa atcgccagca
     6961 acacactgat ggtgttggtc agcttgacga acagactctt ttcatccgga ccgttgccac
     7021 gcagacccgc ctgcaccagc gaaccttcaa agatgacaat cgagaagccc atgatgaacg
     7081 ccgtcagcag cgagaacagc ggcaacattt catagctctg ccacaacgga tgcaccttgt
     7141 agcccgccga gatcatcagt gaccccattg aagactggtg catggtcggc aacagcgcgc
     7201 caagtgcaat gatgaagaac atcaccttgt tcagacgctt gagagaaacc ttccagccca
     7261 gacgttcaaa cagtgccgga gcaaactcca gtgccatcac gccgatatag atggtcatac
     7321 agaccgccgt ctcgaacagt accgagttca cgttgaagtg acccggaatg tagaagtacg
     7381 gcaggttcca gtagcgaccc acgtcgatag tgatcgacaa gccacccagt gagtaaccaa
     7441 acagactcgc caacagcgcc ggacgcacca gcggatggta ttgcccacgg ttaaagacgt
     7501 ataccgccca cgccagcgcc cagccgccac aggcaaagcc ggtaccaatc agcaggtcaa
     7561 acgcgatcca cacgccccac gggaagccgc cgttcaggtc agagacagag cccagaccga
     7621 acaccagacg cttcacaatc aggagcatac agatgacgat taacggtcca aaaatcatga
     7681 ccggtttact gatgattttg ccgcccagcg gttgtggatc atgactcatg atcgtctcct
     7741 ccgtcgtgat ggtcgttttt ggtgttgcga cgaaccagca cggttaagcc cgccagcaca
     7801 gccagtggta gcatcatgcc tttatacagg gtgtgttgaa tattttcgga acgcgcaccg
     7861 gtagaaagat cgtccagttt cggcaggtcg agattttcat aaggcacacc cgtcagtacc
     7921 agaacctgag taccgccgcc ctctttctcg ccgtacagat gcggataata tttcggcacc
     7981 gtatgcaggt aagtgtcgcc agatttcagc gtctgacgcg gatagtggta ttcgctgcca
     8041 ggcttcagcg ccagacgttt tttcgcctcc gccatcagct cttcacgcgt accgaaaatc
     8101 accgcgcccg ccgggcacac ttctacgcag ccaggcagac cgcctttatc gagacgttcc
     8161 acacctttct ggttgcacag ctcgcactta tgcagcgcac caaacgggtt gttgtagtcg
     8221 tacttcggca cgttgtacgg acaggcgacc atgcagtaac ggcaaccggt gcacacgtct
     8281 ttgtcgtaat ggacaatgcc ggttttcgga tcttttttca gtgcagagac cgggcacaca
     8341 gagacacagt tcggatcgac gcagtgcata cactgtttct taatgtacgc gtagccgttc
     8401 tcctcctggt ctttgttgac ccctgtgccg ctggtccaca cctgaatgat gttattggta
     8461 tacggcgaca gtttgtcgtt gttcgaccag gtctgttccc cttgcgggtt acgttcaggg
     8521 aagttgatat cctgacactt ggtgacgcaa gcctggcagc ctacgcacaa ggtcgagtcg
     8581 tacaacatcc ccagcgatcc cggaattggc gggcggtttt cagcagccgc atgactgaca
     8641 gacggcagcg cgcccgtcag caatgccccg caggaggctg ctttaataaa attacgtctg
     8701 ttcacggtta ttctccccgt gagtcagcgt tatctttctt ttgctgacga cccagttcac
     8761 gcaccgccat cacgctgaca ccggcaacca gcccaaccac accgccgagc aaaccaatag
     8821 cgcctgcaga gacgttaccg ccctctttag cgttaacatc cggtttctgt gaacgcggag
     8881 tctgattttc gacgttggca agctgatgga tgcctttatg gaagccgata ccttcttcgt
     8941 tacagccata gcatgggtga ccaatcgcta ccggccacac gccgccaaca tcgcagaatt
     9001 gcagcgttga gcagttgccg taagtttctg gccctttaca gccgaggtgg tacaggcacc
     9061 agccttcacg gtggccttca tcaccgaact ctttggcaaa acgaccagca tcgaagtgcg
     9121 ggcgacgttc gcagtgttcg tgaatcagac ggccataggc gaaggtcgga cgatttttgt
     9181 catccagttt cggcggtttg ccgtaagtga tgatgtgcgc aacggtcgcg aggaagttgt
     9241 gcgggttcgg cgggcagccc ggaatattga taacggtttt gcctggcaga acttcttgca
     9301 ggctgactgc gccagttggg ttaactccag ctgcggcaac accgccccac gcagagcagg
     9361 aaccgatagc gataatcgct gctgcgcctt ctgccgcttt gcggatgtga tccacaatcg
     9421 gctcaccagc aaccatgcaa taaataccgt tatcttttaa tgggatggaa ccatccacaa
     9481 ccaacacata ctgccctttg tacttctcaa gtgcgttatg tttgttctct tcgacctgat
     9541 gaccgaaggc ggcggaaagc acttcgtgat actccagaga gatagtctcc agcacgaggt
     9601 tttctaccgt tggatgcgtt gcacgaagca gagattccgt acaaccggtg cactcctgcg
     9661 cgccaatcca gataactggc ggacgctgcg ggttagtaac cgattcggcc atctctgcag
     9721 cggctttgct acttaacccc atggtggcgg ctaatgctgc acaaagcttc atgaaatcac
     9781 gacggttaat gccgtgagaa tggatgaggg tgttatctcc agtcatttat agttattccg
     9841 ttgcgaagac ctggcatata ttttgcctca atcgcaaaat caataatgcg atcgatgcgc
     9901 catttaccac acatttatta tggttatcga tatcatgata ctgcggcggg gcgctaaaac
     9961 gaagggaaga agcattagtg taattaatta aagcaagata atacgtatgt ttgatcaatt
    10021 ttcgaggcga taaccggcca taaaaaagcg caacgtagaa caggaattat tctcacgaaa
    10081 gaaatccatt accatctctt tatccagtcc atagcggcgc gtcagaatac ccgcttccca
    10141 ggcgctaagc tggcgatctc cggtcttttc gtacatccgg tgtgagtagc ctaatacaaa
    10201 accgcgttta taatcggcac agaattttgt cacattaacc gcactgtcgg catgcgttgc
    10261 ttttaatccc gccattaagc ctttaccaaa atggttattc atcgttcacc tcattcgcta
    10321 tatattatca tatatagcaa tattttaggc aaagaacgac ttttgcgcac gctatttttt
    10381 catgcttgtt taagacgtaa tcccgtaaga gataaaccca tcaggagaga tatttatcga
    10441 accatttcag cgtcctttgc caggcaagat cggcggcaga tttgtcataa cgaggcgtgg
    10501 aatcattatg gaatccgtga ttaacccccg gatagatata cgcctcatag accttattat
    10561 tggctttcaa cgccgcctca taagcgggcc agccctcgtt gattcgggtg tccagttccg
    10621 cgaagtggag tagtaaaggc gcttcaatct tcgccacatc ggcagtgggt gcctgacgac
    10681 cataaaacgg caccgcgcag gccagttccg gatacgcgac agccgccgcg ttcgatacac
    10741 caccgccata gcaaaatccg gtaataccca cttatgcctg tcgcttgcgg atagcgttgc
    10801 ataaactcaa ttgcggcaaa gaaatcattc atcagtttgg ttggatcaac ctgctgttgc
    10861 agctcacgac ctttatcatc atttcccgga taacctc
//
LOCUS       DADMJE010000143        10856 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.146, whole genome shotgun sequence.
ACCESSION   DADMJE010000143 DADMJE010000000
VERSION     DADMJE010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10856)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10856)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10856
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.146"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            83..424
                     /locus_tag="JN001_003261"
     CDS             83..424
                     /locus_tag="JN001_003261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flxA-like family protein"
                     /protein_id="HAY9054393.1"
                     /translation="MATISSTSIPSIQTQSSNRASQGSDVASQIARISQQIIKLTQQI
                     KEIVDTSGSAEDKQKQAELIQQQITLLETQLAQLQKQQAEKAQEKEQRLSLDVSLLNP
                     VEKTTHIDIYI"
     gene            complement(415..1341)
                     /locus_tag="JN001_003262"
     CDS             complement(415..1341)
                     /locus_tag="JN001_003262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054394.1"
                     /translation="MNYSLKQLKVFVTVAQEKSFSRAGERIGLSQSAVSHSVKELENH
                     TGVRLLDRTTREVVLTDAGQQLALRLERLLDELNSTLRDTGRMGQQLSGKVRVAASQT
                     ISAHLIPQCIAESHRRYPDIQFVLHDRPQQWVMESIRQGDVDFGIVIDPGPVGDLQCE
                     AILSEPFFLLCHRDSALAVEDYVPWQALQGAKLVLQDYASGSRPLIDAALARNGIQAN
                     IVQEIGHPATLFPMVAAGIGISILPALALPLPEGSPLVVKRITPVVERQLMLVRRKNR
                     SLSTAAEALWDVVRDQGNALMAGREGDPLYQI"
     gene            1431..2429
                     /locus_tag="JN001_003263"
     CDS             1431..2429
                     /locus_tag="JN001_003263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bile acid:sodium symporter"
                     /protein_id="HAY9054395.1"
                     /translation="MKLFRILDPFTLTLITVVLLASFFPARGDFVPFFENLTTAAIAL
                     LFFMHGAKLSREAIIAGGGHWRLHLWVMCSTFVLFPILGVLFAWWKPVNVDPMLYSGF
                     LYLCTLPATVQSAIAFTSMAGGNVAAAVCSASASSLLGIFLSPLLVGLVMNVHGAGGS
                     LEQVGKIMLQLLLPFVLGHLSRPWIGDWVSRNKKWIAKTDQTSILLVVYTAFSEAVVN
                     GIWHKVGWGSLLFIVVVSCVLLAIVIVVNVFMARRLGFNKADEITIVFCGSKKSLANG
                     IPMANILFPTSVIGMMVLPLMIFHQIQLMVCAVLARRYKRQTEQLQAQQESSADKA"
     gene            complement(2426..2644)
                     /locus_tag="JN001_003264"
     CDS             complement(2426..2644)
                     /locus_tag="JN001_003264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054396.1"
                     /translation="MEKEQLIEIANTIMPFGKYKGRRLIDLPEEYLLWFARKDEFPAG
                     KLGELMQITLLIKTEGLTQLVQPLKRPL"
     gene            complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JN001_003265"
     CDS             complement(2646..4661)
                     /gene="ligA"
                     /locus_tag="JN001_003265"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HAY9054397.1"
                     /translation="MESIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRE
                     LETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLDNVFDEESFLAFNKRVQDRL
                     KNNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLH
                     GENIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKR
                     PLTFFCYGVGVLEGGELPDTHLGRLLQFKKWGLPVSDRVTLCESAEEVLAFYHKVEED
                     RPTLGFDIDGVVIKVNSLEQQEQLGFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRT
                     GAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVL
                     SERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGGLICGAQRKESLKHFVSRRAMD
                     VDGMGDKIIDQLVEKEYVHTPADLFKLTAGKLTGLERMGPKSAQNVVNALEKAKETTF
                     ARFLYALGIREVGEATAAGLAAYFGTLEALEAASIEELQKVPDVGIVVASHVHNFFAE
                     ESNRNVISELLAEGVHWPAPIVINAEEIDSPFAGKTVVLTGSLSQMSRDDAKARLVEL
                     GAKVAGSVSKKTDLVIAGEAAGSKLAKAQELGIEVIDEAEMLRLLGS"
     gene            complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JN001_003266"
     CDS             complement(4732..5718)
                     /gene="zipA"
                     /locus_tag="JN001_003266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZipA"
                     /protein_id="HAY9054398.1"
                     /translation="MMQDLRLILIIVGAIAIIALLVHGFWTSRKERSSMFRDRPLKRM
                     KSKRDDDSYDEDVEDDEGVGEVRVHRVNHAPANAQEHEAARPSPQHQYQPPYASAQPR
                     QPVQQPPEAQVPPQHAPRPAQPVQQPVYQPQPEQPLQQPVSPQVAPAPQPVHSAPQPA
                     QQAFQPAEPVAAPQPEPVAEPAPVMDKPKRKEAVIIMNVAAHHGSELNGELLLNSIQQ
                     AGFIFGDMNIYHRHLSPDGSGPALFSLANMVKPGTFDPEMKDFTTPGVTIFMQVPSYG
                     DELQNFKLMLQSAQHIADEVGGVVLDDQRRMMTPQKLREYQDIIREVKDANA"
     gene            5948..6709
                     /gene="cysZ"
                     /locus_tag="JN001_003267"
     CDS             5948..6709
                     /gene="cysZ"
                     /locus_tag="JN001_003267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate transporter CysZ"
                     /protein_id="HAY9054399.1"
                     /translation="MVSSFTSAPRSGFYYFAQGWKLVSQPGIRRFVILPLLVNILLMG
                     GAFWWLFTQLDVWIPTLMSYVPDWLQWLSYLLWPLAVISVLLVFGYFFSTIANWIAAP
                     FNGLLAEQLEARLTGATPPDTGIFGIMKDVPRIMKREWQKFAWYLPRAIVLLILYFIP
                     GIGQTVAPVLWFLFSAWMLAIQYCDYPFDNHKVPFKEMRTALRTRKITNMQFGALTSL
                     FTMIPLLNLFIMPVAVCGATAMWVDCYRDKHAMWR"
     gene            6894..7865
                     /gene="cysK"
                     /locus_tag="JN001_003268"
     CDS             6894..7865
                     /gene="cysK"
                     /locus_tag="JN001_003268"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000034402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HAY9054400.1"
                     /translation="MSKIFEDNSLTIGHTPLVRLNRIGNGRILAKVESRNPSFSVKCR
                     IGANMIWDAEKRGVLKPGVELVEPTSGNTGIALAYVAAARGYKLTLTMPETMSIERRK
                     LLKALGANLVLTEGAKGMKGAIQKAEEIVASNPEKYLLLQQFSNPANPEIHEKTTGPE
                     IWEDTDGQVDVFIAGVGTGGTLTGVSRYIKGTKGKTDLISVAVEPTDSPVIAQALAGE
                     EIKPGPHKIQGIGAGFIPANLDLKLVDKVIGITNEEAISTARRLMEEEGILAGISSGA
                     AVAAALKLQEDESFTNKNIVVILPSSGERYLSTALFADLFTEKELQQ"
     gene            8249..8506
                     /gene="ptsH"
                     /locus_tag="JN001_003269"
     CDS             8249..8506
                     /gene="ptsH"
                     /locus_tag="JN001_003269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003038086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein Hpr"
                     /protein_id="HAY9054401.1"
                     /translation="MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASA
                     KSLFKLQTLGLTQGTVVTISAEGEDEQKAVEHLVKLMAELE"
     gene            8551..10278
                     /gene="ptsI"
                     /locus_tag="JN001_003270"
     CDS             8551..10278
                     /gene="ptsI"
                     /locus_tag="JN001_003270"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate-protein phosphotransferase
                     PtsI"
                     /protein_id="HAY9054402.1"
                     /translation="MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFL
                     SGRAKASAQLETIKTKAGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADA
                     AAHEVIEGQASALEELDDEYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVA
                     ADLTPSETAQLNLKKVLGFITDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYL
                     ILDAVNNQVYVNPTNEVIDKMRAVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIG
                     TVRDVEGAERNGAEGVGLYRTEFLFMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTM
                     DIGGDKELPYMNFPKEENPFLGWRAIRIAMDRKEILRDQLRAILRASAFGKLRIMFPM
                     IISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS
                     IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGD
                     ERATLLLLGMGLDEFSMSAISIPRIKKIIRNTNFEDAKVLAEQALAQPTTDELMTLVN
                     KFIEEKTIC"
     gene            10319..10828
                     /gene="crr"
                     /locus_tag="JN001_003271"
     CDS             10319..10828
                     /gene="crr"
                     /locus_tag="JN001_003271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015833547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HAY9054403.1"
                     /translation="MGLFDKLKSLVSDDKKDTGTIEIIAPLSGEIVNIEDVPDVVFAE
                     KIVGDGIAIKPTGNKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE
                     GFKRIAEEGQRVKVGDTVIEFDLPLLEEKAKSTLTPVVISNMDEIKELIKLPGSVTVG
                     ETPVIRIKK"
BASE COUNT         2649 a         2802 c         2687 g         2718 t
ORIGIN      
        1 tgcgatttgt aagattgatt tttcttctca agttccttgt tcttctaccg atattacctc
       61 gtacagtgac gaggactgaa caatggccac tatctcttca acttcaattc cttccataca
      121 aacacagagt agtaacaggg catcacaagg tagcgatgtt gcttcacaaa tcgcgcggat
      181 aagtcagcaa atcatcaaac tcactcaaca aattaaagag attgtagaca ctagcggcag
      241 tgctgaagac aagcaaaaac aggccgaatt gattcaacag caaatcaccc tactggaaac
      301 acaactggcg cagttgcaga aacagcaggc agaaaaggcg caggagaaag agcagcgttt
      361 gtctctggat gtatcccttc taaatcctgt tgaaaaaacg actcatatcg atatctatat
      421 ctgatacaac ggatcccctt cccgaccagc cattagcgca ttgccctggt ctcgtaccac
      481 gtcccataac gcttcagcgg cggtggaaag tgaacggttc ttcctgcgca ccagcatcaa
      541 ctggcgttca acaaccggcg taatgcgctt taccaccagt gggctacctt caggcaatgg
      601 tagcgccagt gcgggaagaa tactgatgcc gatgcctgcg gctaccatcg ggaacagcgt
      661 cgccggatgt ccaatctcct gcacaatatt cgcctgaata ccattgcgcg ccagcgctgc
      721 gtcaatcagc ggtcggctgc ctgacgcgta atcctgcaac accaatttcg ctccctgtaa
      781 tgcctgccag ggtacataat cttccacggc caaagcgcta tcgcgatggc aaagcagaaa
      841 gaaaggctcg gaaagaatcg cttcacattg cagatcgccc actgggcctg gatcgatgac
      901 gatgccaaag tcgacatctc cctggcgaat actttccatc acccactgct gcggacgatc
      961 gtgcaggaca aactgaatat ctggatagcg gcgatggctt tcagcaatgc attgcggaat
     1021 aagatgcgcg gaaatggtct ggctggcagc gacccgaact tttccgctca gttgttgccc
     1081 catacgcccg gtatcgcgca acgtgctgtt aagttcatcc agcagtcgct caagacgcaa
     1141 agccaactgc tgccctgcat ctgtaagcac cacttcacgc gtggttctgt ccagcaggcg
     1201 aacaccagta tgattttcca gctccttcac actgtgactt actgccgact ggctcaagcc
     1261 gatacgctct cctgcacgac taaaactttt ctcctgcgct actgtgacga aaacctttaa
     1321 ttgttttaaa gaataattca tctgttttct tcatgaatgg atgcaataaa tcaattttat
     1381 ttctcaaact ggaagaagca caatagaacc atcgatcatc tggagtcttt atgaaacttt
     1441 ttcgtatcct cgatcctttc accttaaccc tgatcacggt ggtgttgctg gcctctttct
     1501 ttccggccag aggcgatttc gtccccttct ttgaaaatct gaccaccgca gctattgccc
     1561 tgctgttctt tatgcacggc gcgaagttgt cgcgtgaggc gattattgct ggcggtggtc
     1621 actggcgact gcatttgtgg gtaatgtgca gcaccttcgt gctgtttccg attctgggtg
     1681 tactgtttgc ctggtggaaa ccggtaaatg tcgacccgat gctctactcc ggttttctct
     1741 acttgtgcac tctcccggct accgtgcagt ctgcaatcgc cttcacgtca atggcgggcg
     1801 gtaacgtcgc ggcggcggtt tgttctgcgt cagcatccag cctgctggga attttccttt
     1861 caccattgct ggttggtctg gtgatgaatg ttcacggtgc agggggcagc cttgagcagg
     1921 tcggtaaaat tatgctgcaa ctgctgctgc cgtttgtgtt ggggcatctt tcccggccgt
     1981 ggattggtga ctgggtgtcg cgcaataaaa aatggattgc gaaaactgac cagacgtcca
     2041 ttctgttggt ggtttataca gcgttcagcg aagccgtcgt taatggtatc tggcataaag
     2101 ttggctgggg atcattgctg tttatcgtgg tggtcagctg cgttcttctg gctatcgtga
     2161 ttgtagttaa cgtctttatg gcacgccgac tgggcttcaa taaggcagat gaaattacta
     2221 tcgtcttttg tggttcgaaa aagagtctgg caaatggcat cccgatggca aacattctgt
     2281 tccccacatc ggtgatcggt atgatggtgc tgcccctgat gattttccat cagatccaat
     2341 tgatggtctg tgcggtgctg gcgcgtcgat acaaacgcca gaccgaacag ttacaggcgc
     2401 agcaggaaag cagcgccgat aaagcttaaa gcggacgctt caggggctgg accagttgcg
     2461 tcagcccctc ggttttaatc agcagcgtga tttgcattag ctcaccgagc ttccctgccg
     2521 ggaactcatc tttgcgggca aaccacagca gatactcctc cggcaggtcg attaagcgac
     2581 gccctttgta tttgccaaac ggcattatcg tattggctat ttcaatcagc tgctcttttt
     2641 ccatctcagc tacccagcaa acgcagcatt tccgcttcgt cgatgacttc aatgcccagt
     2701 tcctgcgcct tcgccagttt agatcctgca gcttcacccg caatcaccag atcggttttc
     2761 ttcgacacgc tgcccgcgac tttcgcgccc agttcgacca gtcgagcttt agcgtcatca
     2821 cgcgacatct ggcttaagct gcccgtaagc accacggttt taccagcaaa cgggctgtca
     2881 atctcttccg cgttgataac gatcggcgca ggccagtgaa caccttccgc caacagctcg
     2941 ctgatgacat tgcggttgct ttcttcggca aagaagttgt gaacgtggga tgcaacgaca
     3001 atgccaacat caggcacctt ttgcagctct tcaatcgaag cggcttccag cgcttccagc
     3061 gtgccgaaat atgccgccag acctgctgcg gtggcctcgc cgacttcacg gatgccaagt
     3121 gcatagagga agcgagcaaa ggtggtttct ttcgcttttt ccagcgcgtt aaccacgttt
     3181 tgtgccgatt ttggccccat acgctccagt ccggtcagtt tgcctgcggt gagtttgaac
     3241 agatctgccg gagtgtggac atattctttt tcaaccagct gatcgatgat tttgtcgccc
     3301 attccgtcaa catccatcgc acggcgggaa acaaagtgtt tcagcgactc tttacgctgc
     3361 gcaccgcaaa tcaggccacc ggtacagcgg gcaaccgctt caccttccac acgctcaacg
     3421 tcagaaccac ataccggaca atgcgtcggg aatacaacct cacgggtatc ttccgggcgt
     3481 tcagaaagca cgacgttaac cacctgcggg atcacgtcgc cagcgcggcg aatcaccact
     3541 ttatcgccaa tgcgtaaacc aagacgttcg atttcatccg cattgtgtaa ggttgcgtta
     3601 ctcaccagca cgccagcaac atggacaggt tccagacgcg caacaggcgt aatcgcgcca
     3661 gtacgcccaa cctgaaactc gacgtcacgc acaaaggtca tctgctcctg cgccgggaat
     3721 ttaaacgcta ccgcccagcg cggggcacgc gcgacaaagc caagctgctc ctgctgttcc
     3781 agtgagttga ccttaatcac cacgccgtcg atatcaaagc ccagcgtcgg gcggtcttct
     3841 tccactttgt gatagaacgc cagcacttct tccgccgatt cacaaagcgt tacccgatcg
     3901 ctgaccggca acccccactt tttaaattgc agtaaacggc caagatgagt atccggcagc
     3961 tcgccacctt ccagaacacc aacgccatag cagaaaaaag tgagcggtcg cttcgctgta
     4021 atacgcggat caagctgacg cagtgaacca gctgccgcat tacgtgggtt agcaaaaact
     4081 ttcccgcccg tgcgtcgcgc atcttcgtta atcttttcga accccgcctg cggcaggaac
     4141 acttcaccac gcacttccag acgcgccggg atattctctc catgcagctt cagcggaatg
     4201 gcgcgaatag tacgcacatt agacgtgata tcttccccgg tggtgccatc gccacgggtc
     4261 gcggcactga ctaaaacgcc attttcatac agaatactga cggcaaggcc atccagcttc
     4321 agctcacagc accaggtgac tttctcgttg tttttcagac ggtcctgcac acgtttgttg
     4381 aaagcaagaa agctttcttc atcaaaaacg ttatccagtg acagcattgg tacttcatgg
     4441 cgtatctggc tgaaagccgc cagcggcgca gcacctacac gttgggtagg cgaatcaggc
     4501 gtaatcagtt ctggatgttt agtttccagc tcgcgcagtt cgcgcatcag cctgtcgtat
     4561 tcagcgtcgg gaatttccgg cgcatccatc acatgataaa gatattcatg atggcgaagc
     4621 gtcgttcgca gttctgtcag ttgttgttcg attgattcca tatcgcacca tcaatgctaa
     4681 aaacccccga caagcggggg ttcgaagaag agttaatttg ccttaagtgt atcaggcgtt
     4741 ggcgtctttg acttcgcgga tgatgtcctg gtactcgcgc aatttctgcg gagtcatcat
     4801 acggcgctga tcgtcaagca cgacaccgcc cacttcatcg gcaatatgct gcgcagattg
     4861 cagcatcagc ttgaagttct gcagctcgtc accgtaagac ggtacctgca taaagatagt
     4921 gacacccgga gtagtgaaat ccttcatttc aggatcaaag gttcccggtt tcaccatatt
     4981 cgccaggctg aataacgccg ggccgctgcc atccgggcta agatgacgat ggtaaatatt
     5041 catatcgcca aaaatgaagc ccgcttgttg aatgctgtta agaagcagtt caccgtttag
     5101 ctcgctaccg tgatgcgccg cgacgttcat gataatcacc gcttctttgc gcttcggttt
     5161 atccataact ggagccggtt ccgctacagg ctcaggctgt ggtgccgcta cgggttctgc
     5221 aggctggaaa gcctgttgtg ccggttgcgg tgctgaatgc acaggctgcg gcgctggcgc
     5281 gacctgtggc gaaactggct gctgcaacgg ctgttcaggc tgcggctgat agacaggctg
     5341 ctgcaccggc tgcgctggac gcggagcatg ttgcggcggt acctgcgctt caggcggctg
     5401 ctggaccggt tgacgcggct gcgcagacgc ataaggcggt tggtactggt gttgcggcga
     5461 cggacgagca gcctcatgct cctgagcgtt agccggggca tgattcacgc ggtgaacacg
     5521 aacctcacca acgccctcat catcttcgac atcctcgtca taagaatcgt cgtcacgttt
     5581 tgacttcatt cgttttaatg gccgatcgcg gaacatagaa gatcgttctt tacggctggt
     5641 ccagaaacca tgtaccagta aagcgattat ggcgatcgcg ccaacaatga ttaatatcag
     5701 acgcaaatcc tgcatcatta tattctctgt tgttctaaca ccttgccaca acggcaaaca
     5761 tttactcact aagagtattt gccgattacc tcaagtgcaa gtgcactatt aactttcaca
     5821 gcacaaagat agatgaaatc gtgctttttg ctgttttttc gaacatatcc taactgtcca
     5881 ttgcgcaatt acccggtaaa atacgcagaa ttttcctagg attggtcaaa aggagctcat
     5941 cctgattatg gtttcatcat tcacatctgc cccacgcagc ggtttttact attttgcgca
     6001 aggctggaag ctcgtctcgc aacctgggat tcggcgtttc gttattttac cgctgctggt
     6061 caatattttg ttgatggggg gcgcattctg gtggctcttt acacagctcg atgtctggat
     6121 cccgactctc atgagttacg ttccggactg gctacaatgg ctgagttatc tgttgtggcc
     6181 tctggctgtc atctctgtgc tgttagtgtt tggctatttc ttctccacga ttgctaactg
     6241 gattgccgct ccgtttaacg gtttattggc tgaacaactg gaagcacgat tgactggcgc
     6301 tacaccgcca gataccggga ttttcggtat catgaaagat gtgccgcgaa tcatgaaacg
     6361 cgaatggcaa aaatttgcct ggtatctgcc gcgcgcaatt gtattactaa ttctttactt
     6421 catccctggt attgggcaaa ccgtcgcgcc ggtactgtgg ttcctgttta gcgcctggat
     6481 gttagccatc cagtattgcg attacccctt cgataaccac aaagtgccgt ttaaagagat
     6541 gcgcaccgcc ctgcgcacac gcaaaatcac caatatgcag tttggtgctt taaccagcct
     6601 gtttacgatg atcccgctgc ttaatctgtt catcatgccc gttgccgttt gtggcgcgac
     6661 ggcgatgtgg gtcgattgct atcgcgataa acacgcgatg tggcggtaac aatctaccgg
     6721 ttattttgta aaccgtttgt gtgaaacagg ggtggcttat gccgcccctt attccatctt
     6781 gcatgtcatt atttcccttc tgtatataga tatgctaaat ccttacttcc gcatattctc
     6841 tgagcgggta tgctacctgt tgtatcccaa tttcatacag ttaaggacag gccatgagta
     6901 agatttttga agataactcg ctgactatcg gtcacacgcc gctggttcgc ctgaatcgca
     6961 tcggtaacgg acgcattctg gcgaaggtgg aatctcgtaa ccccagcttc agcgttaagt
     7021 gccgtatcgg tgccaacatg atttgggatg ccgaaaagcg cggcgtgctg aaaccaggcg
     7081 ttgaactggt tgaaccgacc agcggtaata ccgggattgc actggcctat gtagctgccg
     7141 ctcgcggtta caaactcacc ctgaccatgc cagaaaccat gagtattgaa cgccgcaagc
     7201 tgctgaaagc gttaggtgca aacctggtgc tgacggaagg tgctaaaggc atgaaaggcg
     7261 caatccaaaa agcagaagaa attgtcgcca gcaatccaga gaaatacctg ctgctgcaac
     7321 aattcagcaa tccggcaaac cctgaaattc acgaaaaaac caccggtccg gagatctggg
     7381 aagataccga cggtcaggtt gatgtattta ttgctggcgt tgggactggc ggtacgctga
     7441 ctggcgtcag ccgctacatt aaaggcacca aaggcaagac cgatcttatc tctgtcgccg
     7501 ttgagccaac cgattctcca gttatcgccc aggcgctggc aggtgaagag attaaacctg
     7561 gcccgcataa aattcagggt attggcgctg gttttatccc ggctaacctc gatctcaagc
     7621 tggtcgataa agtcattggc atcaccaatg aagaagccat ttctaccgcc cgtcgtctaa
     7681 tggaagaaga aggtattctt gcaggtatct cttctggagc agctgttgcc gcggcgttga
     7741 aactacaaga agatgaaagc tttaccaaca agaatattgt ggttattcta ccatcatcgg
     7801 gtgagcgtta tttaagcacc gcattgtttg ccgatctctt cactgagaaa gaattgcaac
     7861 agtaatgcca gcttgttaaa aatgcgtaaa aaagcacctt tttaggtgct tttttgtggc
     7921 ctgcttcaaa ctttcgcccc tcctggcatt gattcagcct gtcggaactg gtatttaacc
     7981 agactaatta ttttgatgcg cgaaattaat cgttacagga aaagccaaag ctgaatcgat
     8041 tttatgattt ggttcaattc ttcctttagc ggcataatgt ttaatgacgt acgaaacgtc
     8101 agcggtcaac acccgccagc aatggactgt attgcgctct tcgtgcgtcg cgtctattaa
     8161 aaactggcgc taacaataca ggctaaagtc gaaccgccag gctagacttt agttccacaa
     8221 cactaaacct ataagttggg gaaatacaat gttccagcaa gaagttacca ttacagctcc
     8281 gaacggtctg cacacccgcc ctgctgccca gtttgtaaaa gaagctaagg gcttcacttc
     8341 tgaaattact gtgacttcca acggcaaaag cgccagcgcg aaaagcctgt ttaaactgca
     8401 gactctgggc ctgactcaag gtaccgttgt gactatctcc gcagaaggcg aagacgagca
     8461 aaaagcggtt gaacatctgg ttaaactgat ggcggaactc gagtaatttc ccgggttctt
     8521 ttaaaaatca gtcacaagta aggtagggtt atgatttcag gcattttagc atccccgggt
     8581 atcgctttcg gtaaagctct gcttctgaaa gaagacgaaa ttgtcattga ccggaaaaaa
     8641 atttctgccg accaggttga tcaggaagtt gaacgttttc tgagcggtcg tgccaaggca
     8701 tcagcccagc tggaaacgat caaaacgaaa gctggtgaaa cgttcggtga agaaaaagaa
     8761 gccatctttg aagggcatat tatgctgctc gaagatgagg agctggagca ggaaatcata
     8821 gccctgatta aagataaaca catgacagct gacgcagctg ctcatgaagt tatcgaaggt
     8881 caggcttctg ccctggaaga gctggatgat gaatacctga aagaacgtgc ggctgacgta
     8941 cgtgatatcg gtaagcgcct gctgcgcaac atcctgggcc tgaagattat cgacctgagc
     9001 gccattcagg atgaagtcat tctggttgcc gctgacctga cgccgtccga aaccgcacag
     9061 ctgaacctga agaaggtgct gggtttcatc accgacgcgg gtggccgtac ttcccacacc
     9121 tctatcatgg cgcgttctct ggaactgcct gctatcgtgg gtaccggtag cgtcacctct
     9181 caggtgaaaa atgacgacta tctgattctg gatgccgtaa ataatcaggt ttacgtcaat
     9241 ccaaccaacg aagttattga taaaatgcgt gctgttcagg agcaagtggc ttctgaaaaa
     9301 gcagagcttg ctaaactgaa agatctgcca gctattacgc tggacggtca ccaggtagaa
     9361 gtatgcgcta acattggtac ggttcgtgac gttgaaggtg cagagcgtaa cggcgctgaa
     9421 ggcgttggtc tgtatcgtac tgagttccta ttcatggacc gcgacgcgct gcccactgaa
     9481 gaagaacagt ttgctgctta caaagcagtg gctgaagcgt gtggctcgca ggcggttatc
     9541 gttcgtacca tggacatcgg cggcgacaaa gagctgccat acatgaactt cccgaaagaa
     9601 gagaacccgt tcctcggctg gcgcgctatc cgtatcgcga tggatcgtaa agagatcctg
     9661 cgcgatcaac tccgcgctat cctgcgtgcc tcggctttcg gtaaattgcg cattatgttc
     9721 ccgatgatca tctctgttga agaagtgcgt gcactgcgca aagagatcga aatctacaaa
     9781 caggaactgc gcgacgaagg taaagcgttt gacgagtcaa ttgaaatcgg cgtaatggtg
     9841 gaaacaccgg ctgccgcaac aattgcacgt catttagcca aagaagttga tttctttagt
     9901 atcggcacca atgatttaac gcagtacact ctggcagttg accgtggtaa tgatatgatt
     9961 tcacaccttt accagccaat gtcaccgtcc gtgctgaact tgatcaagca agttattgat
    10021 gcttctcatg ctgaaggcaa atggactggc atgtgtggtg agcttgctgg cgatgaacgt
    10081 gctacacttc tgttgctggg gatgggtctg gacgaattct ctatgagcgc catttctatc
    10141 ccgcgcatta agaagattat ccgtaacacg aacttcgaag atgcgaaggt gttagcagag
    10201 caggctcttg ctcaaccgac aacggacgag ttaatgacgc tggttaacaa gttcattgaa
    10261 gaaaaaacaa tctgctaatc cacgagatgc ggcccaattt actgcttagg agaagatcat
    10321 gggtttgttc gataaactga aatctctggt ttccgacgac aagaaggata ccggaactat
    10381 tgagatcatt gctccgctct ctggcgagat cgtcaatatc gaagacgtgc cggatgtcgt
    10441 ttttgcggaa aaaatcgttg gtgatggtat tgctatcaaa ccaacgggta acaaaatggt
    10501 cgcgcctgta gacggtacca ttggtaaaat ctttgaaacc aatcacgcgt tctctatcga
    10561 atctgatagc ggcgttgaac tgttcgtcca cttcggtatc gacaccgttg aactgaaagg
    10621 cgaaggcttc aagcgtattg cagaagaagg tcagcgcgtg aaagttggcg atactgtcat
    10681 tgaatttgat ctgccgctgc tggaagagaa agccaagtct accctgactc cggttgttat
    10741 ctccaacatg gacgaaatca aagaactgat caaactgccc ggtagcgtaa ccgtgggtga
    10801 aaccccggtt atccgcatca agaagtaatt cttgccgcag tgaaaaatgg cgccca
//
LOCUS       DADMJE010000144        10693 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.147, whole genome shotgun sequence.
ACCESSION   DADMJE010000144 DADMJE010000000
VERSION     DADMJE010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10693)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10693)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10693
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.147"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(88..237)
                     /gene="hokB"
                     /locus_tag="JN001_003272"
     CDS             complement(88..237)
                     /gene="hokB"
                     /locus_tag="JN001_003272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_025301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokB"
                     /protein_id="HAY9054404.1"
                     /translation="MKHNPLVVCLLIICITILTFTLLTRQTLYELRFRDGDKEVAALM
                     ACTSR"
     gene            636..2249
                     /gene="trg"
                     /locus_tag="JN001_003273"
                     /pseudo
     CDS             636..2249
                     /gene="trg"
                     /locus_tag="JN001_003273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415938.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein Trg"
     gene            complement(2287..3209)
                     /locus_tag="JN001_003274"
                     /pseudo
     CDS             complement(2287..3209)
                     /locus_tag="JN001_003274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310054.2"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            3426..4769
                     /locus_tag="JN001_003275"
     CDS             3426..4769
                     /locus_tag="JN001_003275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HAY9054405.1"
                     /translation="MANSITADEIREQFSQAMSAMYQQEVPQYGTLLELVADVNLAVL
                     ENNPQLHEKMVNADELARLNVERHGAIRVGTAQELATLRRMFAIMGMYPVSYYDLSQA
                     GGPVHSTAFRPIDDASLARNPFRVFTSLLRLELIENEILRQKAAEILRQRDIFTPRCR
                     QLLEEYEQQGGFNETQAQEFVQEALETFRWHQSATVDEETYRALHNEYRLIADVVCFP
                     GCHINHLTPRTLDIDRVQSMMPECGIEPKILIEGPPRREVPILLRQTSFKALEETVLF
                     AGQKQGTHTARFGEIEQRGVALTPKGRQLYDDLLRNAGTGQDNLTHQMHLQETFRTFP
                     DSEFLMRQQGLAWFRYRLTPSGEAHRQAIHLGDDPQPLIERGWVVAQPITYEDFLPVS
                     AAGIFQSNLGNETQTRSHGNASREAFEQALGCPVLDEFQLYQEAEERSKRRCGLL"
     gene            4994..6649
                     /locus_tag="JN001_003276"
     CDS             4994..6649
                     /locus_tag="JN001_003276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucan biosynthesis protein"
                     /protein_id="HAY9054406.1"
                     /translation="MDRRRFIKGSMAMAAVCGTSGIASLFSQAAFAADSDIADGQTQR
                     FDFSILQSMAHDLAQTAWRGAPRPLPDTLATMTPQAYNSIQYDAEKSLWHNVENRQLD
                     AQFFHMGMGFRRRVRMFSVDPATHLAREIHFRPELFKYNDAGVDTKQLEGQSDLGFAG
                     FRVFKAPELARRDVVSFLGASYFRAVDDTYQYGLSARGLAIDTYTDSKEEFPDFTAFW
                     FDTVKPGATTFTVYALLDSASITGAYKFTIHCEKSQVIMDVENHLYARKDIKQLGIAP
                     MTSMFSCGTNERRMCDTIHPQIHDSDRLSMWRGNGEWICRPLNNPQKLQFNAYTDNNP
                     KGFGLLQLDRDFSHYQDIMGWYNKRPSLWVEPRNKWGKGTIGLMEIPTTGETLDNIVC
                     FWQPEKAVKAGDEFAFQYRLYWSAQPPVHCPLARVMATRTGMGGFPEGWAPGEHYPEK
                     WARRFAVDFVGGDLKAAAPKGIEPVITLSSGEAKQIEILYIEPIDGYRIQFDWYPTSD
                     STDPVDMRMYLRCQGDAISETWLYQYFPPAPDKRQYVDDRVMS"
     gene            6789..7013
                     /locus_tag="JN001_003277"
     CDS             6789..7013
                     /locus_tag="JN001_003277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415943.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcH family protein"
                     /protein_id="HAY9054407.1"
                     /translation="MFPEYRDLISRLKNENPRFMSLFDKHNKLDHEIARKEGFDGRGY
                     NAEVVRMKKQKLQLKDEMLKILQQESVKGV"
     gene            7076..7612
                     /gene="rimL"
                     /locus_tag="JN001_003278"
     CDS             7076..7612
                     /gene="rimL"
                     /locus_tag="JN001_003278"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707645.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12-serine
                     acetyltransferase"
                     /protein_id="HAY9054408.1"
                     /translation="MTETIKVSESLELHAVAESHVTPLYQLICKNKTWLQQSLNWPQF
                     VQSEEDTRKTVQGNVMLHQRGYAKMFMIFKEDELIGVISFNRIEPLNKTAEIGYWLDE
                     SHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPQSNQVALRNGFILEGCLKQAE
                     FLNDAYDDVNLYARIIDS"
     gene            complement(7607..8587)
                     /locus_tag="JN001_003279"
                     /pseudo
     CDS             complement(7607..8587)
                     /locus_tag="JN001_003279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707644.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LbetaH domain-containing protein"
     gene            8711..9703
                     /gene="tehA"
                     /locus_tag="JN001_003280"
     CDS             8711..9703
                     /gene="tehA"
                     /locus_tag="JN001_003280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dicarboxylate transporter/tellurite-resistance
                     protein TehA"
                     /protein_id="HAY9054409.1"
                     /translation="MQSDKVLNLPAGYFGIVLGTIGMGFAWRYASQVWQVSHWLGDGL
                     VILAMIIWGLLTSAFITRLIRFPHSVLAEVRHPVLSSFVSLFPATTMLVAIGFVPWFR
                     PLAVCLFSFGVVVQLAYAAWQTAGLWRGSHPEEATMPGLYLPTVANNFISAMACGALG
                     YTDAGLVFLGAGVFSWLSLEPVILQRLRSSGELPTALRTSLGIQLAPALVACSAWLSV
                     NGGEGDTLAKMLFGYGLLQLLFMLRLMPWYLSQPFNASFWSFSFGVSALATTGLHLGS
                     GSENGFFHTLAVPLFIFTNFIIAILLIRTFALLMQGKLLVRTERAVLMKAEDKE"
     gene            9700..10293
                     /gene="tehB"
                     /locus_tag="JN001_003281"
     CDS             9700..10293
                     /gene="tehB"
                     /locus_tag="JN001_003281"
                     /EC_number="2.1.1.265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tellurite resistance methyltransferase TehB"
                     /protein_id="HAY9054410.1"
                     /translation="MIIRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRN
                     SLYLAANGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILST
                     VVLMFLEAKTIPGLIANMQRCTKLGGYNLIVAAMDTADYPCTVGFPFAFKEGELRRYY
                     EGWERVKYNEDVGELHRTDANGNRIKLRFATMLARKK"
     gene            10596..>10693
                     /locus_tag="JN001_003282"
     CDS             10596..>10693
                     /locus_tag="JN001_003282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3313 domain-containing protein"
                     /protein_id="HAY9054411.1"
                     /translation="MRTTSFAKVAALCGLLALSGCASKITQPDKYSG"
BASE COUNT         2736 a         2496 c         2712 g         2749 t
ORIGIN      
        1 aacatgcact aactgaagtg taaaaggggt gccatgagaa aatgaatctg ctagtcagat
       61 gcgcggggaa aatccccgcg cttgccctta cctggacgtg caggccatga gcgcagcaac
      121 ctccttatca ccgtcccgga accgcagttc gtagagcgtt tgtcgggtca ggagtgtgaa
      181 tgtcagaatc gtaatgcaga taatgagcag acacaccacc agagggttgt gcttcatagc
      241 ctttctcctt gccggatggc gggtaagagg ctaagatctg aattgctagg ttcattcgtt
      301 ggcctcggtt gatagaaata tcggtcgggg ccttcgtctt tctgattccc ggttagcctg
      361 aaaacagaaa gtctcaggca cccgcaggca tcctatgagg tttccttagg gacgaaaata
      421 atcacttcac gaaattgcgt gctgttttcc agaatttttc gtcattcgga ttagccagtt
      481 tagccattcg ttactctctt cattccaata gcattaattt tctctgcaat aattgttgta
      541 aaaatgtgac gcaaagaggt ttttggtcat aagtaattac cgtcaagtgc cgatgacttt
      601 ctatcaggag taaacctgga cgagagacaa cggtaatgaa tacaactccc tcacagcgat
      661 taggtttttt gcatcacatc aggctggttc cgttatttgc ctgcattctt ggcggtatct
      721 tagttctatt cgcattaagt tctgctctgg caggccgatc gcgatcagcg tgatgttact
      781 gcggagattg agattcggac cgggttagcg aacagttcag attttttgcg ttcagcccgg
      841 atcaatatga ttcaggccgg ggctgcgagt cgtattgcgg aaatggaagc aatgaagcga
      901 aatattgcgc aagccgaatc ggagattaaa cagtcgcagc aaggttatcg tgcttatcag
      961 aatcgaccgg tgaaaacacc tgctgatgaa gccctcgaca ctgaattaaa tcaacgcttt
     1021 caggcttata tcacgggtat gcaacctatg ttgaaatatg ccaaaaatgg catgtttgaa
     1081 gcgattatca atcatgaaag tgagcagatc cgaccgctgg ataatgctta taccgatatt
     1141 ttgaacaaag ccgttaagat acgtagcacc agagccaacc aactggcgga actggcccat
     1201 cagcgcaccc gcctgggtgg gatgttcatg attggcgcgt ttgtgcgtgc cctggtcatg
     1261 acgctgataa catttatggt gctacgtcgg atcgtcattc gtccactgca acatgccgca
     1321 caacggattg aaaaaatcgc cagtggcgat ctgacgatga atgatgaatc ggcgggtcgt
     1381 aatgaaatcg gtcgcttaag tcgtcattta cagcaaatgc agcattcact ggggatgaca
     1441 gtagggactg ttcgacaggg cgcggaagag atttatcgtg gcaccagcga aatttcagct
     1501 ggcaatgcgg acctgtcatc tcgcaccgaa gaacaagcgg cggctatcga acaaactgcc
     1561 gccagcatgg agcaactcac tgcgacggtg aaacagaatg cggataacgc gcatcatgcc
     1621 agcaaactgg cgcaagaggc ttctattaaa gccagcgatg gcgggcagac ggagtaaaaa
     1681 cgatgggcgc tatctccacg agttcgaaga aaatttctga gatcaccgcc gtcatcaaca
     1741 gtattgcttt ccagacgaat attctggcac tgaatgctgc cgttgaagcc gcgcgagcgg
     1801 gtgagcaagg gcgtggattt gccgttgtcg ccagcgaagt acggacactc gcaagtcgca
     1861 gcgctcaggc ggcgaaagag attgaaggct tgatcagtga atcagtcagg ttaattgacc
     1921 tggggtcgga tgaggtggca acggccggga aaaccatgag cactattgtt gatgccgtcg
     1981 cgagtgtcac acatatcatg caggaaatcg ccgccgcctc ggatgaacaa agtagaggca
     2041 taacgcaggt tagccaggcg atttctgaaa tggataaggt gacgcaacag aatgcttctc
     2101 tggtagaaga ggcctcagcg gcggcggtgt cccttgaaga acaggcggca cgattaactg
     2161 aggcggtgga tgtattccgt ctgaacaaac attctgtgtc ggcagaacct cgcggagcgg
     2221 gtgaaccagt tagtttcgct acggtgtgaa aatgttcaag gagggatcga cagatccctt
     2281 cacctttcag aacggcattg attttcgaat agcgttaatc atcaactggc aaccagaaga
     2341 gaacatcgca tctacgcggg tcagtattcc aatcggttcg cctgcaccat gtcccggaac
     2401 aggctgggcc accagcgtgg catgacgcag gtcgtctttt accgcgccag aagggacaaa
     2461 ccacacgtag tcgtattcaa ccgtaagttg acgagatagc gaagcagaca gcgtttcgat
     2521 acaacccgaa ggaattttac atccctggct ctgtactaat gcatctgaat gctggcgtgg
     2581 cgcagtgcct tctggtgata caacgaccgg ccatttcagc actcggctta gcgttacgtt
     2641 ctcctgaagt agcgggtgat tagggcggac aaccagcttc agcgattcaa gaaacagcag
     2701 ttcgtaatta agcccggtca tcagttcagg atctgacatc cgaccaatgc cgatatcgat
     2761 ttccccggtt ttcaaacccg ccagaatcat agggttactc attgtcgcaa cttgcaaggt
     2821 cgtctctttt tgttgctgat gaaactgacc tataaccgaa ggtaatatcc ccagtgccgc
     2881 agtaggtagt gcaccaatcc tgacgacatc attattaaga ccttctttac gatgaagcga
     2941 ctgtccggca gtgttgatgg cgtcaagaac tctgactgca tgcgttaaaa attgttcgcc
     3001 gggtaaggta agttgcgccc cctgacgacc acgctcaaac aagcgagcgc ccgtcagctg
     3061 ctacagttca ttcaatgtct tagagagcgc aggttgactc aaattaaggg tttcagccgc
     3121 gcccccaaag ttccttgttg tgcgacagct acgaatgtat gaaggtggcg caaacggatg
     3181 cgctgactaa acagactatt tttttccata agcgatgtta aaaacgaagc ggtgtcgctg
     3241 acaagtgaag ttgtttgatt atgataactt gattgcaaaa tataattaac aattaaagca
     3301 attgtgttac agcaaaatgg ataatattga tgttttcgcg gcgagatcac agtttgtaaa
     3361 ttcttcccgc cagagtgaat gcggttacct acactccaga ttactgacca ctggaggcag
     3421 acactatggc gaacagcatc acggcggatg agattcggga acagttttcg caggcaatgt
     3481 cagccatgta ccagcaagaa gttccgcagt acggcacgct gctggaactg gtagctgatg
     3541 tgaatctggc tgtgctggaa aacaatcctc aactgcacga aaaaatggta aatgcagatg
     3601 agctggcgcg actgaatgtt gaacgtcatg gggcgattcg cgttgggact gcacaagagc
     3661 ttgctactct tcggcggatg tttgccatta tggggatgta cccggtgagc tattacgatc
     3721 tctcgcaggc aggggggccg gtacattcga cagcatttcg gcccattgat gatgcttctc
     3781 tggcgcgtaa tcccttccgc gtttttacct ccttactccg ccttgagctt atcgagaacg
     3841 aaattttgcg ccagaaagcg gcggagattc tgcgtcagcg cgatatcttc accccacgtt
     3901 gtcgacaact gttagaggaa tatgagcagc agggcggttt taacgaaaca caggcacagg
     3961 aatttgtgca agaggccctg gaaacgtttc gctggcacca gtcagcaacg gtagatgaag
     4021 aaacctatcg cgccttgcac aacgaatatc ggttgattgc tgatgtggtc tgttttcctg
     4081 gatgccatat caaccacctg acgccacgta cgctggatat tgaccgggtg cagtcgatga
     4141 tgcctgaatg cggaattgaa cccaaaattc tcatcgaggg gccgccgcgc cgcgaggtac
     4201 cgattttact acgccagacc agctttaaag cactggaaga gacggtgttg tttgcggggc
     4261 agaaacaggg cacgcatacc gcgcgctttg gtgaaattga gcagcgtggc gtggcattaa
     4321 cgccgaaagg gcgacaactg tatgatgatc ttctgcgtaa cgctggaacc gggcaggata
     4381 atctcactca ccaaatgcat ttacaggaaa ccttccgcac ttttcctgac agtgagtttt
     4441 taatgcgtca gcaagggttg gcatggttcc ggtaccgtct gacgccttcg ggtgaggcgc
     4501 atcgtcaggc gattcatctt ggagatgatc cacagccttt aattgaacgt ggttgggtag
     4561 tggcgcaacc catcacctat gaagatttct tgcccgttag cgcggcgggg atcttccagt
     4621 caaatctggg taatgaaacg cagacacgca gtcacggtaa tgccagtcgc gaagcatttg
     4681 agcaggcgtt gggttgtccg gttttggatg agttccagct ttaccaggaa gcggaagaac
     4741 gcagtaaacg tcgctgtggt ttgctttaaa ttctgaccat ccgcctttgc aaaaatttgc
     4801 ctgattttac aaacgaatca ggctcatccc atcgacataa aaaaaatgcc gatttatgca
     4861 tattctctca gttcaacaat tggattatta ataaatattg tctagagtga gcggtcataa
     4921 ataagcactt tcttgccgct gaaaacgacc agcgcgggac cattcacaac accagaagga
     4981 ctcactttca ggtatggatc gtagacgatt tattaaaggt tcaatggcta tggccgccgt
     5041 gtgcggtacc agcggcattg cttctctttt ttctcaggcg gcattcgcgg cagattctga
     5101 tattgccgac gggcaaaccc agcgttttga cttctccatt ctacagtcaa tggcgcacga
     5161 cttagcgcaa acagcgtggc gtggtgcgcc tcgtccgtta cctgacacgc tggcgacaat
     5221 gacgccgcag gcttataaca gtattcaata cgacgccgaa aaatcgctct ggcataacgt
     5281 tgagaaccgt caactggacg ctcagttctt ccatatggga atgggattcc gtcgccgcgt
     5341 tcgtatgttt tctgtagatc cagcaacaca tctggcgcgt gaaattcact ttcgcccgga
     5401 gttgttcaaa tacaacgatg cgggtgttga tacaaaacaa ttagaagggc aaagcgatct
     5461 cggctttgcc ggttttcgcg tgtttaaagc ccccgaactg gcgcgccgtg atgtagtatc
     5521 atttctcggc gcgagttatt tccgcgccgt tgatgataca tatcaatacg gtttgtcggc
     5581 ccgcggcctg gcgatcgaca cttacaccga cagtaaagaa gagttccccg actttaccgc
     5641 cttctggttt gatacggtaa aaccgggggc aactaccttt accgtttatg cgttgctcga
     5701 tagcgccagc attactggtg cctataagtt cactatccat tgtgagaaaa gtcaggtgat
     5761 tatggatgtg gaaaatcacc tgtatgcgcg caaagacatt aaacagctgg gcattgcgcc
     5821 gatgaccagt atgttcagct gcggtactaa tgaacgtcgg atgtgcgata caattcatcc
     5881 gcaaattcat gactctgatc gtctgtccat gtggcggggc aacggcgagt ggatttgccg
     5941 tccgctgaat aatccgcaaa aattgcagtt caatgcttac accgacaaca acccgaaagg
     6001 gtttggttta ttgcaactgg atcgtgactt ctcccattat caggacatta tgggctggta
     6061 taacaaacgc ccaagtctgt gggtggaacc gcgtaacaag tggggtaagg gcaccatcgg
     6121 cctgatggaa atcccaacaa cgggcgaaac gctggataac attgtctgtt tctggcagcc
     6181 agaaaaagct gtaaaagcag gtgatgagtt tgcattccag tatcgtctgt actggagtgc
     6241 gcaaccgcct gttcattgcc cattagcgcg cgttatggcg acgcgtaccg gcatgggcgg
     6301 tttcccggaa ggttgggcgc caggtgaaca ctatcccgaa aaatgggcgc gtcgttttgc
     6361 cgtcgatttc gttggtggtg atctgaaagc tgccgcgcca aaaggcattg agccggtgat
     6421 tacgctttcc agtggggaag cgaagcaaat cgaaattctc tatattgaac ccatcgatgg
     6481 ttatcgtatt cagtttgact ggtatccgac ttcggactcc actgatccgg tcgatatgcg
     6541 gatgtatcta cgttgtcagg gggacgctat cagtgaaaca tggctgtatc agtatttccc
     6601 gccagcgccg gataaacgtc agtatgttga cgaccgcgtg atgagttaat cgttttttct
     6661 tcggcacctt cttcgggagg tgccgtctgg ttaaacacga tcccgctcgc atttttccct
     6721 aagttaaatg agtaatctga tggtgtgtat ttcagataca ccttgtcagc cactaacagg
     6781 gagtgcgtat gtttccagaa taccgagatt taatatcccg tctgaaaaac gaaaatcctc
     6841 gctttatgtc cttgttcgat aaacacaata aacttgatca tgaaattgcc agaaaggaag
     6901 gtttcgacgg tcgagggtac aatgcggaag tggtccgcat gaaaaaacaa aagctacagt
     6961 taaaagatga gatgctcaaa atcctgcagc aggagagcgt caaaggggtg taaactttcc
     7021 taagccgcca gccaggcggc ttttttaaca acagcatgga ttgactggag ataagatgac
     7081 tgaaacgata aaagtaagcg aatcacttga attacatgct gttgcggaaa gtcacgtcac
     7141 acctctttat cagttaatct gtaaaaataa aacctggtta cagcagtcgc taaactggcc
     7201 gcagttcgtt cagagtgaag aggacacgcg aaaaacggtg cagggtaatg tgatgttgca
     7261 tcaacgcggc tatgccaaaa tgttcatgat tttcaaagaa gatgaactta tcggcgttat
     7321 ctcgtttaat cgtattgaac cactgaataa aactgctgaa atcggctact ggctggacga
     7381 atctcatcag gggcagggga tcatttctca ggcgctgcag gcattgattc atcattacgc
     7441 tcagtctggt gaacttagac gcttcgtgat caaatgtcgg gtggacaatc cgcaaagcaa
     7501 ccaggtcgct ttgcgcaatg gttttatcct tgaaggttgc ctgaaacagg ctgagttcct
     7561 gaatgatgcc tatgatgatg tgaacttata cgcgcgtatt atcgattcat aataaccctg
     7621 ccagcggcgt tcgcgtaatg cgctcctcgc cgttaatgac ttttggacca cggacatgaa
     7681 ccgtgtcgcc atcaaaggct tcaacgacgg cgtggtcggt taactccaca tggttttcaa
     7741 ttatcaccgc acctgaaata cggctctcac cttgtattac aacgtgctcg tcgagcagaa
     7801 tcggttcacc acgtaccacg gcatttccgc caatcaagac atgatgtttt aacacacaat
     7861 taccttccac aatggcatat tccgccacct gcgaactgta atgaatcgtc ggaatggcat
     7921 cttcttctat gccagctttc acctgcgcgt gaccgtagac tttagcgcaa tcgcatagcc
     7981 agacgttgtt ctcttcatta ccttcaacac tggcaaaatc aaaaacttcg gcgcgatgtt
     8041 caataaaagc ataccggacg acggcatcgc cataaatttg tgcctggtgg acaatacgcg
     8101 aggcgctaac ccttgcgcga tcataaattt ggagcaggag ttgatggtcg ggcgttaagc
     8161 cttgtgcggc gacgatcata gaatgttgat caattaaggc gtgaccaaat attctacatt
     8221 gcccgtaaac taatgagtca tgaatggtga cactgtcact tatatatgca ccctgactga
     8281 tttcactatt atcgatccag acgttatccg ttgcgtaaac ctctccccac agcacgctgg
     8341 tgccggtgat acgcgtatta ccagaaatca ccgttccgcc gaacgcaata gcattctggt
     8401 cgtaaatcca gcaatttcct tcctatgcta acaccgtttc gcgatcgatc cagccgccag
     8461 cggttcctgc tatcacatcg ttaaaatcgc taatggcgat aatctgccgt aataacacac
     8521 tttttttagt gccatcttcc tgataactaa aggctcgctg ttcttcactt agacgatatt
     8581 tgcgcatagc gttttctcac aggtgactta ctatgaccgt agcaaattct gcggctctgg
     8641 ctatgctcga gaaaattcca taaaatgcat ttcaaatata ctttataaat taaacaaaat
     8701 gagtaagaag atgcagagcg ataaagtgct caatttgccg gcaggctact ttggtattgt
     8761 gttggggacg atagggatgg gatttgcctg gcgctatgcc agccaggttt ggcaggtcag
     8821 ccactggtta ggggatgggc tggtgattct ggcgatgatc atctggggat tattaactag
     8881 cgcatttatt acccgactca tacgctttcc gcatagcgtg ctggcggaag ttcgccatcc
     8941 agtgctgagc agttttgtga gtttgtttcc ggcaacgacg atgctggtgg cgattggttt
     9001 tgttccgtgg tttcgcccac tggcggtgtg cctgttcagt tttggtgtcg tggttcagtt
     9061 ggcttatgcc gcctggcaaa ctgcgggatt atggcgcgga tctcaccctg aagaagctac
     9121 catgcctgga ctgtatctgc cgacagttgc caacaacttt atcagcgcaa tggcctgtgg
     9181 tgcgttgggc tacaccgacg ccggtctggt gtttttaggc gcaggcgttt tctcatggct
     9241 aagccttgaa ccggtgatct tgcagcgtct gcgcagttcg ggagaattac ccacggcact
     9301 gcggacatca ctcggcattc agctcgctcc tgcgctggtg gcctgtagtg cctggttgag
     9361 cgtcaacggc ggcgagggtg atacgctggc gaaaatgctt tttggttatg gactgctgca
     9421 actgctgttt atgctacgtc tgatgccatg gtatctctcc cagccattta atgcttcatt
     9481 ctggagtttc tcgttcggcg tatctgcact ggcaaccacc ggtttgcatc tggggagtgg
     9541 cagcgaaaat ggatttttcc atacgctggc ggtaccgctg tttatcttta ccaattttat
     9601 tattgcaata ctgctcatcc gtacttttgc gcttctgatg cagggaaaat tgttagtcag
     9661 aaccgagcgc gctgttttaa tgaaagcaga ggacaaagaa tgatcattcg tgacgaaaac
     9721 tattttactg ataaatatga attaacccgc acacactctg aagtactgga agcggtgaaa
     9781 gtggttaaac cgggtaaaac gctggatctg ggctgtggca atggtcgtaa cagtctttac
     9841 ctggcagcca atggttatga tgttgacgca tgggataaaa atgccatgag tatcgccaat
     9901 gtagagcgca ttaaatccat tgaaaatctg gataatttac acacccgagt cgttgatctg
     9961 aataacctca catttgatag acagtacgat tttattcttt cgactgtggt actgatgttc
    10021 cttgaggcta aaaccatccc agggctgatt gccaatatgc aacgttgcac taaacttggt
    10081 ggttacaacc tgattgtggc ggcgatggat accgctgatt atccatgtac cgtcggcttc
    10141 ccgtttgcct tcaaagaggg agaattacgt cgatattacg aaggctggga gagggtgaaa
    10201 tacaatgaag acgtcggcga gctgcaccgc accgacgcca acggtaatcg tattaaactg
    10261 cgtttcgcca cgatgctggc acgtaaaaaa tgacccgcta agaataaggc gcgtgaaaat
    10321 tccccacgct gagatgattt actgttcttc ttttcggtaa gcatattttt tatcgaaggg
    10381 atgtgaaatt aatcacagta gtcgaagttt tttagcagct taacttactg aaatttaact
    10441 actgatgatt gacttagccc ctttttcggc attgactatg tcgtctgaaa aggggctgaa
    10501 aaatttattt tcaccaacac tttttttgcc acaacacgaa gcggcgcttt ttgctataac
    10561 ttaaaaagta atataatcat ctcaggaaac tattcatgcg taccacatca tttgcgaaag
    10621 ttgcagcttt atgcggcttg ttggctctgt ctggttgtgc ctctaaaatc acccagccag
    10681 ataaatattc tgg
//
LOCUS       DADMJE010000145        10663 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.148, whole genome shotgun sequence.
ACCESSION   DADMJE010000145 DADMJE010000000
VERSION     DADMJE010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10663
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.148"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            311..1609
                     /gene="kgtP"
                     /locus_tag="JN001_003283"
     CDS             311..1609
                     /gene="kgtP"
                     /locus_tag="JN001_003283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate permease"
                     /protein_id="HAY9054412.1"
                     /translation="MAESTVTADSKLTSSDTRRRIWAIVGASSGNLVEWFDFYVYSFC
                     SLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLLSVCM
                     MCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGF
                     YASFQYVTLIGGQLLALLVVVVLQHTMEDAALREWGWRIPFALGAVLAVVALWLRRQL
                     DETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGM
                     HANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAAIFTVPILSALQNVS
                     SPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANAIFGGSAEYV
                     ALSLKSIGMETAFFWYVTLMAVVAFLVSLMLHRKGKGMRL"
     gene            complement(1606..1950)
                     /locus_tag="JN001_003284"
     CDS             complement(1606..1950)
                     /locus_tag="JN001_003284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708437.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiM family lipoprotein"
                     /protein_id="HAY9054413.1"
                     /translation="MFFGGHVLRILFVCSLLLLSGCSHMANDSWSGQDKAQHFIASAM
                     LSAAGNEYSQHQGMSRDRSAMFGLMFSVSLGASKELWDSRPEGSGWSWKDLAWDVAGA
                     STGYTVWQLTRH"
     gene            complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JN001_003285"
     CDS             complement(1975..3330)
                     /gene="pssA"
                     /locus_tag="JN001_003285"
                     /EC_number="2.7.8.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--serine
                     O-phosphatidyltransferase"
                     /protein_id="HAY9054414.1"
                     /translation="MLSKFKRNKHQQHLAQLPKISQSVDDVDFFYAPADFRETLLEKI
                     ASAKQRICIVALYLEQDDGGKGILNALYKAKRQRPELDVRVLVDWHRAQRGRIGAAAS
                     NTNADWYCRMAQENSGVDVPVYGVPINTREALGVLHFKGFIIDDSVLYSGASLNDVYL
                     HQHDKYRYDRYHLIRNRKMSDIMFEWVTQNIMNGRGVNRLDDVNRPKSPEIKNDIRLF
                     RQELRDAAYHFQGDADNDQLSVTPLVGLGKSSLLNKTIFHLMPCAEQKLTICTPYFNL
                     PAILVRNIIQLLREGKKVEIIVGDKTANDFYIPEDEPFKIIGALPYLYEINLRLFLSR
                     LQYYVNTDQLVVRLWKDDDNTYHLKGMWVDDKWMLITGNNLNPRAWRLDLENAILIHD
                     PQLELAPQREKELELIREHTTIVKHYRDLQSIADYPVKVRKLIRRLRRIRIDRLISRI
                     L"
     gene            complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JN001_003286"
     CDS             complement(3444..6104)
                     /gene="pat"
                     /locus_tag="JN001_003286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein lysine acetyltransferase"
                     /protein_id="HAY9054415.1"
                     /translation="MSQRGLEALLRPKSIAVIGASMKPNRAGYLMMRNLLAGGFNGPV
                     LPVTPAWKAVLGVLAWPDIASLPFTPDLAVLCTNASRNLALLEELGEKGCKTCIILSA
                     PASQHEDLRACALRHNMRLLGPNSLGLLAPWPGLNASFSPVPIKRGKLAFISQSAAVS
                     NTILDWAQQRKMGFSYFIALGDSLDIDVDELLDYLARDSKTSAILLYLEQLSDARRFV
                     SAARSASRNKPILVIKSGRSPAAQRLLNTTAGMDPAWDAAIQRAGLLRVQDTHELFSA
                     VETLSHMRPLRGDRLMIISNGAAPSALALDALWSRNGKLATLSEETCQKLRDALPEHV
                     AISNPLDLRDDASSEHYIKTLDILLHSQDFDALMVIHSPSAAAPATESAQVLIEAVKH
                     HPRSKYVSLLTNWCGEHSSQEARRLFSEAGLPTYRTPEGTITAFMHMVEYRRNQKQLR
                     ETPALPSNLTSNTAEAHLLLQQAIAEGATSLDTHEVQPILQAYGMNTLPTWIASDSTE
                     AVHIAEQIGYPVALKLRSPDIPHKSEVQGVMLYLRTANEVQQAANAIFDRVKMAWPQA
                     RIHGLLVQSMANRAGAQELRVVVGHDPVFGPLIMLGEGGVEWRPEDQAVVALPPLNMN
                     LARYLVIQGIKSKKIRARSALRPLDVAGLSQLLVQVSNLIVDCPEIQRLDIHPLLASG
                     SEFTALDVTLDISPFEGDNESRLAVRPYPHQLEEWVELKNGERCLFRPILPEDEPQLQ
                     QFISRVTKEDLYYRYFSEINEFTHEDLANMTQIDYDREMAFVAVRRIDQTEEILGVTR
                     AISDPDNIDAEFAVLVRSDLKGLGLGRRLMEKLITYTRDHGLQRLNGITMPNNRGMVA
                     LARKLGFNVDIQLEEGIVGLTLNLAQREES"
     gene            complement(6136..6834)
                     /locus_tag="JN001_003287"
     CDS             complement(6136..6834)
                     /locus_tag="JN001_003287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311476.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DTW domain-containing protein"
                     /protein_id="HAY9054416.1"
                     /translation="MTENTVLQLRAERIARATRPFLARGNRVRRCQRCLLPEKLCLCS
                     TITPAQAKSRFCLLMFDTEPMKPSNTGRLIADILPDTVAFQWSRTEPSQDLLDLVQNP
                     DYQPMVVFPASYADEQREVIFTPPAGKPPLFIMLDGTWPEARKMFRKSPYLDNLPVIS
                     VDLSRLSAYRLREALAEGQYCTAEVAIALLDMAGDTGAAAGLGEHFTRFKTRYLAGKT
                     QHLGSITAEQLESV"
     gene            complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JN001_003288"
     CDS             complement(6903..7322)
                     /gene="trxC"
                     /locus_tag="JN001_003288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin TrxC"
                     /protein_id="HAY9054417.1"
                     /translation="MNTVCTHCQSINRIPDDRIEDAAKCGRCGHDLFDGEVINATGET
                     LDKLLKDDLPVVIDFWAPWCGPCRNFAPIFEDVAQERSGKVRFVKVNTEAERELSSRF
                     GIRSIPTIMIFKNGQVVDMLNGAVPKAPFDSWLNESL"
     gene            7529..8566
                     /locus_tag="JN001_003289"
     CDS             7529..8566
                     /locus_tag="JN001_003289"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA/rRNA methyltransferase"
                     /protein_id="HAY9054418.1"
                     /translation="MNDEMKGKSGKVKVMYVRSDDDSDKRTHNPRTGKGGGRPGKSRA
                     DGGRRPARDDKQSQPRDRKWEDSPWRTVSRAPGDETPEKADHGGISGKSFIDPEVLRR
                     QRAEETRVYGENACQALFQSRPEAIVRAWFIQSVTPRFKEALRWMAANRKAYHVVDEA
                     ELTKASGTEHHGGVCFLIKKRNGTTVQQWVSQAGAQDCVLALENESNPHNLGGMMRSC
                     AHFGVKGVVVQDASLLESGAAIRTAEGGAELVQSITGDNIVNVLDDFRQAGYTVVTTS
                     SEQGKPLFKTSLPAKMVLVLGQEYEGLPDAARDPNDLRVKIDGTGNVAGLNISVATGV
                     LLGEWWRQNKA"
     gene            complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JN001_003290"
     CDS             complement(8614..9303)
                     /gene="ung"
                     /locus_tag="JN001_003290"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HAY9054419.1"
                     /translation="MANELTWHDVLAEEKQQPYFLNTLQTVASERQSGVTIYPPQKDV
                     FNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPG
                     FTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVV
                     FLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQRGETPI
                     DWMPVLPAESE"
     gene            9608..9991
                     /gene="grcA"
                     /locus_tag="JN001_003291"
     CDS             9608..9991
                     /gene="grcA"
                     /locus_tag="JN001_003291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autonomous glycyl radical cofactor GrcA"
                     /protein_id="HAY9054420.1"
                     /translation="MITGIQITKAANDDLLNSFWLLDSEKGEARCIVAKAGYAEDEVV
                     AVSKLGDIEYREVPVEVKPEVRVEGGQHLNVNVLRRETLEDAVKHPEKYPQLTIRVSG
                     YAVRFNSLTPEQQRDVIARTFTESL"
     gene            complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JN001_003292"
     CDS             complement(10047..10634)
                     /gene="eamB"
                     /locus_tag="JN001_003292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine/O-acetylserine transporter"
                     /protein_id="HAY9054421.1"
                     /translation="MTPTLLSAFWTYTLITAMTPRPNNILALSSATSHGFRQSTRVLA
                     GMSLGFLIVMLLCAGISFSLAVIDPAAVHLLSWAGAAYIVWLAWKIATSPTKEDGLQA
                     KPISFWASFALQFVNVKIILYGVTALSTFVLPQTQALSWVVGVSVLLAMIGTFGNVCW
                     ALAGHLFQRLFRQYGRQLNIVLALLLVYCAVRIFY"
BASE COUNT         2655 a         2704 c         2740 g         2564 t
ORIGIN      
        1 aaaggccatc cgtcaggatg gcctttttgc attggcgcag aaaaaatgac tgatgcgacg
       61 ctgcgcgtct tatactccca catatgccag attcagcaac ggatgcggtt tccccaactt
      121 gcctacttcc atacgtgtcc tccttaccag aatttatcct taagctcctc aataaccatt
      181 ttcctgctaa ctaaattcat ggttaatgtt gcataataat acgtaacaaa tgcataacat
      241 tttctttacc aaaagaaata aacaaaagtg accaacaaaa gcatcggatt acggcaggag
      301 acataatggc atggctgaaa gtactgtaac ggcagacagc aaactgacaa gtagtgatac
      361 tcgtcgccgc atttgggcga ttgtgggggc ctcttcaggt aatctggtcg agtggttcga
      421 tttctatgtc tactcgttct gttcactcta cttcgcccac attttcttcc cttccgggaa
      481 cacgacgact caactactac aaacagcagg tgtttttgct gcgggattcc tgatgcgccc
      541 aataggcggt tggctatttg gccgcatagc cgataaacat ggtcgcaaaa aatcgatgct
      601 gttatcggtg tgtatgatgt gtttcggatc gctggttatc gcctgcctcc caggttatga
      661 aactataggt acgtgggctc cggcattatt gcttctcgcg cgtttatttc agggattatc
      721 cgttggcgga gaatatggca ccagcgccac ctatatgagt gaagttgccg ttgaagggcg
      781 caaaggtttt tacgcatcat ttcagtatgt gacgttgatc ggcggacaac tgctagccct
      841 actggttgtc gtggttttac aacacaccat ggaagacgct gcactcagag agtggggatg
      901 gcgtattcct ttcgcgttag gagctgtgtt agctgttgtg gcgttgtggt tacgtcgtca
      961 attagatgaa acttcgcaac aagaaacgcg cgctttaaaa gaagctggat ctctgaaagg
     1021 attatggcgc aatcgccgtg cattcatcat ggttctcggt tttaccgctg cgggctccct
     1081 ttgtttctat accttcacca cttatatgca gaagtatctg gtaaatactg cgggaatgca
     1141 tgccaacgtg gcgagtggca ttatgactgc cgcattgttt gtattcatgc ttattcaacc
     1201 actcattggc gcgctgtcgg ataagattgg tcgccgtacc tcaatgttat gtttcggttc
     1261 gctggcagcc atttttaccg ttcctattct ctcagcattg caaaacgttt cctcgcctta
     1321 tgccgctttt ggtctggtga tgtgtgccct gctgatagtg agtttttata catcaatcag
     1381 tggaatactg aaggctgaga tgttcccggc acaggttcgc gcattaggcg ttggtctgtc
     1441 atatgcggtc gctaatgcta tatttggtgg ttcggcggag tacgtagcgt tgtcgctgaa
     1501 atcaatagga atggaaacag ccttcttctg gtatgtgacc ttgatggccg tggtggcgtt
     1561 tctggtttct ttgatgctac atcgcaaagg gaaggggatg cgtctttagt gacgggtcag
     1621 ttgccagacg gtatagccgg tgcttgcacc ggcgacatcc caggccaaat ccttccagct
     1681 ccagccgctc ccttcggggc ggctatccca aagctctttt gacgccccca aactgacaga
     1741 gaacatcaat ccaaacatgg cactgcgatc ccggctcatc ccctgatgct gtgaatattc
     1801 atttccggcg gcggaaagca tcgccgaggc gataaagtgt tgagctttat cctgcccgct
     1861 ccagctatcg ttagccatat ggctgcatcc agaaagtaac aatagcgaac agacaaaaag
     1921 aatacgcaaa acgtggcctc caaaaaacaa accccgtaca ggacggggtt gtgattacag
     1981 gatgcggcta attaatcggt cgatgcggat acggcgcaaa cggcggatga gtttacgaac
     2041 cttcaccgga taatcggcaa tactttgcag atcgcgatag tgcttaacga tggtggtatg
     2101 ctcgcggatc agctccagtt ctttctctcg ctgcggcgca agctccagtt gtggatcgtg
     2161 gatcaaaatg gcgttttcca gatccagacg ccaggcgcgc gggttcaggt tattaccggt
     2221 gatcaacatc cacttatcat caacccacat ccctttcagg tgataggtgt tgtcgtcatc
     2281 tttccataac cgaaccacta gctggtcagt attgacgtaa tactgcaaac ggctcaggaa
     2341 aagacgcaga ttgatctcat agagataagg caatgcgcca attatcttga aaggttcatc
     2401 ttccggaatg tagaagtcgt tcgcggtttt atcaccaaca ataatttcga cctttttccc
     2461 ttcgcgcagc aactggataa tattgcgcac aaggattgct ggcaggttga agtatggcgt
     2521 acagatggtt agtttctgct cggcacaagg cataagatgg aaaatggtct tgttcaacag
     2581 actcgatttc cccagcccca ctagcggcgt tacggaaagc tgatcgttgt cggcatcgcc
     2641 ctggaaatga taagcggcat cacgcagctc ctggcggaac agacgaatat cgttcttgat
     2701 ttccgggctt tttggccgat taacatcatc cagacgatta acgccgcggc cattcataat
     2761 attctgtgta acccattcaa acataatgtc tgacatctta cggttacgga taagatgata
     2821 acggtcgtag cgatatttat cgtgctgatg caggtaaaca tcgttcaggc tggcaccgct
     2881 ataaagtacg ctatcgtcga tgataaagcc tttaaagtgc agaacaccaa gggcttcacg
     2941 ggtattgatt ggaacgccat aaaccggaac atctacgccc gaattttcct gcgccatgcg
     3001 gcagtaccag tcagcgttag tgttagatgc cgcagcgcca atgcgtccac gttgtgcacg
     3061 atgccagtcg accagcaccc gcacatccag ttccggacgc tgccttttag ctttatacaa
     3121 cgcgttcaga atgcctttgc caccgtcatc ctgttcgaga tacagggcga caatgcaaat
     3181 gcgctgcttc gcgctggcta ttttttccag cagcgtctcc cggaagtcgg cgggagcgta
     3241 aaagaaatcg acatcatcaa ctgattgaga aatcttgggt agttgggcaa ggtgttgttg
     3301 atgtttatta cgcttaaatt ttgacaacat cacagtgcat ttcttctctg ttcattgaag
     3361 gatcctctgt gcaatgcaga cgacataagc gggcaataat aacaccagtc ccgattaagt
     3421 agtcaacatt tccagtacct tactcatgat tcctcgcgtt gggcaagatt tagcgtaagc
     3481 ccaacgatcc cctcttcgag ctggatatca acgttaaacc cgagcttgcg ggctagcgcc
     3541 accatgccac gattgtttgg catcgtaata ccattcagac gttgtagtcc gtgatctcgc
     3601 gtataggtaa tcaacttttc cattaagcgt cgacctaagc ctaacccttt gagatccgag
     3661 cgaaccagca cagcaaattc ggcatcgatg ttatcaggat cggaaatcgc acgcgtgacg
     3721 ccgaggatct cttccgtttg atcaatacgt cgtaccgcta caaacgccat ttcccgatcg
     3781 tagtcgatct gtgtcatgtt ggctaaatct tcatgggtaa attcgttgat ctcgctaaag
     3841 tagcggtaat aaagatcttc tttggtgact cgcgaaatga attgctgaag ttgtggctca
     3901 tcttctggca aaatcgggcg gaacaagcag cgttcaccgt ttttcaattc tacccattct
     3961 tccagctgat gcggataagg gcgcactgcc agccgactct cgttatcgcc ttcaaacggc
     4021 gagatatcca gcgtgacatc cagcgcggta aattcactgc cagaagccag caaaggatga
     4081 atatccagac gctgaatttc cgggcaatcg acaatcaagt tggaaacctg caccagaagc
     4141 tggctcaagc ctgcaacatc caatgggcgt agcgcactgc gcgcacgaat ctttttactt
     4201 ttgatcccct gaataaccag atagcgggcc aggttcatgt tcagcggcgg cagtgcgacg
     4261 acggcttgat cttcaggacg ccactccaca ccgccttcac ccagcatgat caacggcccg
     4321 aaaaccggat cgtgcccaac cacaacccgc aactcctgag cgccagcacg gttagccata
     4381 ctttgcacca acaggccgtg gatccgcgcc tgcggccagg ccatttttac gcgatcgaaa
     4441 atggcgtttg ccgcttgctg gacttcattg gctgtacgca agtacagcat gacgccctga
     4501 acttccgatt tatgtggaat atccggcgaa cgcaatttca gcgccaccgg ataaccaatc
     4561 tgttcggcaa tatgcaccgc ttcggtgcta tcgctggcaa tccaggtagg gagcgtgttc
     4621 atgccatacg cttgcaggat gggctgaact tcatgggtat cgagcgacgt agccccttcg
     4681 gcaatcgcct gttgcaacag aagatgcgct tctgcggtat tggaagtcag attgctgggc
     4741 aacgccggcg tttcgcgtag ttgcttctga ttacgccggt actccaccat atgcataaaa
     4801 gcagtgatgg ttccttccgg ggtacggtag gtcggcagcc cggcttcgct gaataaacgt
     4861 cgtgcctctt gcgaggagtg ctcgccgcac cagttcgtca gcaaagagac atatttgctg
     4921 cggggatgat gctttaccgc ttcaattaat acttgcgcgc tttctgttgc gggagcagcg
     4981 gcgctgggcg aatgaataac catcagcgcg tcaaaatcct ggctgtggag cagaatatcc
     5041 agcgttttaa tatagtgctc actgctggcg tcatcgcgta gatcgagcgg gttagatatt
     5101 gccacatgtt ctggcagtgc atcgcgcagt ttctggcagg tttcttcgct tagcgttgcc
     5161 agcttgccat tgcgtgacca taaggcatcc agcgccagcg cggaaggcgc agcaccgttg
     5221 ctgataatca tcagccggtc gccacgtagc gggcgcatat ggctaagggt ttccaccgcc
     5281 gaaaacagct cgtgggtgtc ctgtacccgc aacaaaccgg cacgctgaat agccgcatcc
     5341 catgccgggt ccattcctgc cgtggtgttg agcagtcgct gtgccgccgg gctacgtccg
     5401 cttttaatca ccagaatcgg tttattacgc gaggcactac gggccgccga aacaaagcgt
     5461 cgcgcgtcgc ttaactgttc gagatagagc aggatggcgc tggttttact gtcgcgtgcc
     5521 agatagtcaa gcaattcatc aacgtcgata tccaggctgt cgccgagcgc aataaagtag
     5581 gaaaagccca tcttacgctg ttgcgcccag tcgaggatgg tgttggagac ggcagccgat
     5641 tgcgaaataa acgccagctt gccgcgttta atcggcacag gcgaaaagct ggcattcaga
     5701 cctggccagg gagccagtaa acccagactg tttggtccaa gcaggcgcat gttatggcgc
     5761 agggcgcagg cgcggagatc ttcgtgttgc gatgccgggg cggaaagaat aatgcaggtt
     5821 ttacagcctt tctcgccgag ctcttccaga agagcaagat tacggctggc attggtacat
     5881 aaaaccgcaa ggtcgggtgt aaagggcaag ctggcaatat ccggccaggc caacacaccc
     5941 aacaccgctt tccaggctgg cgtcaccggg agtaccggtc cgttaaagcc tcccgccagc
     6001 aggttacgca tcatcaggta acctgcgcga ttgggtttca tcgacgcgcc aattaccgct
     6061 atcgattttg gtcgcagtag tgcttccagt cctcgctgac tcataccggt ctcccgcaga
     6121 agtgaccgaa tgattttaaa cgctttctaa ctgttctgct gtgatgctac ccagatgttg
     6181 cgttttccct gccagatagc gtgttttaaa gcgggtaaaa tgctcgccta accctgctgc
     6241 cgccccggta tcgccggcca tatctaacag tgcgatggct acctcggcag tacaatattg
     6301 gccttcagcc agggcttcac gcaggcgata ggcagaaagc cgggaaagat cgacggaaat
     6361 gacgggaaga ttatccagat acggactttt acgaaacatc ttgcgagctt ccggccaggt
     6421 accatcgagc atgataaaca gcggtggctt accggcaggt ggtgtgaaga tcacttcccg
     6481 ttgctcatca gcatacgagg cgggaaagac caccattggc tgataatccg ggttttgtac
     6541 cagatccagc aaatcctgcg agggttcggt acgcgaccat tgaaacgcaa cggtatcagg
     6601 caaaatatca gcaatcagac gcccggtatt actgggcttc attggctcgg tgtcgaacat
     6661 cagcaaacag aagcgacttt ttgcttgtgc tggggtaatt gtcgaacaga gacataattt
     6721 ctctggcaaa agacagcgtt ggcagcgacg aacgcgatta ccgcgggcaa gaaaaggacg
     6781 tgttgcgcgc gcaatacgct cggcgcgtaa ctggagaaca gtgttttcgg tcataagaga
     6841 gcgtcgaaaa aacgccattg tcgcagagga gaaaacgggg cacaagatgc gccccggtaa
     6901 gattaaagag attcgttcag ccagctatcg aacggagctt tcggtactgc gccattaagc
     6961 atgtcgacaa cctgaccgtt tttgaaaatc atgatcgtcg gtatactacg aattccaaag
     7021 cgactgctca attcacgttc agcttcggta ttcactttca caaagcgcac tttaccgcta
     7081 cgctcttgcg cgacatcttc aaaaattggt gcgaaattac ggcaggggcc gcaccacggt
     7141 gcccagaagt cgatcaccac aggtagatca tccttcagca atttgtcgag tgtttcaccg
     7201 gtcgcattaa tcacctctcc gtcaaacaag tcgtgaccgc agcgtccgca ttttgccgca
     7261 tcttcgatcc gatcgtcggg aatgcgattg atggactgac aatgggtaca aacggtattc
     7321 ataactaacc tcgggatgag taaggagact tatcggcaac gacgccggta tgtttctaat
     7381 atgttacata ttatcgggga cattgttcca gacaacaatc tgttttattc aataggtatg
     7441 atagtcgcag gctttggtac gaaatcatgg agaaccgcgc ggacttcggg taatctgcgc
     7501 gcttcgcgca gcgctggtgg agaaaagcat gaacgatgaa atgaaaggta aaagcggcaa
     7561 ggtcaaagtg atgtatgtcc gcagtgatga tgattctgat aaacgtaccc acaacccgcg
     7621 taccgggaaa gggggcgggc gtccaggaaa atctcgtgct gacggtggcc gtcgccccgc
     7681 ccgcgatgac aaacagagtc agccccgtga ccgcaagtgg gaagattcgc cgtggcgcac
     7741 ggtttcccgc gcgccgggtg atgagacgcc ggaaaaggcc gatcacggtg gcatcagtgg
     7801 taaaagtttt attgatccgg aagtgttgcg tcgtcagcgt gcggaagaaa cccgcgtcta
     7861 cggcgaaaac gcctgtcagg cactgttcca gagccgtccg gaagcaattg ttcgcgcctg
     7921 gtttatccag agcgtaacgc cacgttttaa agaagccttg cgctggatgg cggcaaaccg
     7981 caaagcgtac catgtggtgg atgaagctga attgacaaaa gcgtcaggca cggaacatca
     8041 cggcggcgtt tgcttcctga tcaaaaagcg taacggtaca accgtgcagc agtgggtaag
     8101 ccaggcaggc gcgcaggatt gcgttctggc actggaaaac gaatctaacc cgcataacct
     8161 gggtggcatg atgcgcagct gcgcgcactt cggcgtgaaa ggtgtcgtgg tgcaggatgc
     8221 gtcactgctg gagtcggggg cggctatccg taccgcagaa ggcggcgcag agctcgttca
     8281 gtcgattact ggcgacaaca ttgttaacgt gctggatgat ttccgtcagg caggttacac
     8341 cgtagtgacc acttccagcg agcagggtaa accgctgttc aaaactagtc tgccagcgaa
     8401 aatggtactg gtgctgggtc aggaatatga agggttaccg gatgccgcac gcgatccgaa
     8461 cgatctgcgc gtgaagattg acggtacggg caacgttgcc gggctgaata tctctgtcgc
     8521 aaccggcgtt ttgcttggtg aatggtggcg tcagaataaa gcctgataaa tcagccgggt
     8581 ggcaactctg ccatccggca tttccccgca aatttactca ctctctgccg gtaatactgg
     8641 catccagtca atcggcgtct cgccacgttg ttccagccac tgatttgcca gcacaaaatg
     8701 gttgcagcca aagaatccac gatgcgccga aagcggcgac ggatgcggtg ctttcagtac
     8761 atgatggcgt tgcttatcta taatcgcccc tttcttttgc gcatgtgatc cccacaacaa
     8821 aaacaccacg ccttcgcggt gctggttaat caggctgatg actttatcag taaacgtctc
     8881 ccaaccgagg ctggcgtggg aatgcgcctg acctgcgcga accgtcaaca cagtattgag
     8941 cagcagaacg ccctgacgcg cccagctttc gagatagcca tgattagggc gggtgaagcc
     9001 cggaatagta ttttccagct ctttatacat attcaataat gacggaggaa tggcaatgcc
     9061 gggacgaacg gaaaatgcca gaccatgcgc ctgtcccggt ccgtgataag gatcctggcc
     9121 gagaatcacc actttaacgt cacccaactc ggtaaagcgg aacgcgttaa agacatcttt
     9181 ttgtggtgga tagatagtga cgccggactg ccgctcgctg gcgacggtct gaagggtatt
     9241 aagaaaataa ggttgttgct tctcttcagc cagcacgtca tgccaggtta attcgttagc
     9301 catctcgctc tcctgcgaat cttcaatccg cctagcttaa ctgcttcttt ctacagaaca
     9361 aaatcatgct cattttttag acttaaacga gtgcaaaaaa atgtaaattg gtaaaatttc
     9421 acacccgcat aagttgatgt aaaacaataa aatccattta cgaccacaat cgatgtgtgg
     9481 tttttattga tttaaatcaa agaatcaagg gtggttgagg agtatatata cactcaagca
     9541 acaatggttt taccaattag ccgcgacagg ctgaacaaat caaataattt tgccggggag
     9601 gcatcacatg attacaggta tccagattac taaagccgct aacgacgatc tgctgaactc
     9661 tttctggctg ctggacagcg aaaaaggcga agcacgttgc atcgttgcaa aagcaggtta
     9721 tgcagaagat gaagtggttg cagtaagcaa actgggtgac attgaatacc gtgaagttcc
     9781 agtagaagtg aaaccagaag ttcgcgttga aggtggtcaa cacctgaacg ttaacgttct
     9841 gcgtcgtgaa actctggaag atgcagttaa gcatccggaa aaatatccgc agctgaccat
     9901 ccgtgtatcc ggttatgcag ttcgctttaa ctctctgact ccggaacagc agcgcgacgt
     9961 tatcgctcgt acctttactg aaagcctgta aggcttaagt agcaagttac taagcggaag
    10021 agggcgacct cttccgcttt ttttcgttaa tagaaaatgc gtaccgcgca atagaccagc
    10081 aacagggcaa gcacgatatt taactggcga ccatactggc gaaacaatcg ctgaaacaga
    10141 tgccccgcca gcgcccagca cacattgcca aacgtcccaa tcatcgccag caaaacgctg
    10201 acgccaacta cccagcttag cgcctgtgtt tgcggcagaa caaacgtcga cagtgccgta
    10261 acaccgtaca aaatgatttt gacgttcaca aactgcaaag caaagctggc ccaaaagctg
    10321 attggttttg cctgaagtcc gtcttccttt gttgggctgg tggcgatttt ccacgccagc
    10381 cagacaatat atgccgcccc cgcccaactc aaaaggtgta ccgctgccgg gtcaatcact
    10441 gccagtgaaa atgaaatgcc cgcacacagt aacatcacaa tcaaaaatcc cagactcatc
    10501 cctgccagca cgcgggtact ttgacgaaat ccatgcgacg tagcagagct aagggcgaga
    10561 atattgttcg gtcttggcgt catagcggta atcagggtgt aagtccaaaa agcacttaaa
    10621 agggtcggtg tcacttgtta tctcctctgt tttggtagac agt
//
LOCUS       DADMJE010000146        10521 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.149, whole genome shotgun sequence.
ACCESSION   DADMJE010000146 DADMJE010000000
VERSION     DADMJE010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10521
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.149"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            143..2011
                     /gene="kup"
                     /locus_tag="JN001_003293"
     CDS             143..2011
                     /gene="kup"
                     /locus_tag="JN001_003293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity potassium transporter Kup"
                     /protein_id="HAY9054422.1"
                     /translation="MSTDNKQSLPAITLAAIGVVYGDIGTSPLYTLRECLSGQFGFGV
                     ERDAVFGFLSLIFWLLIFVVSIKYLTFVMRADNAGEGGILTLMSLAGRNTSARTTSML
                     VIMGLIGGSFFYGEVVITPAISVMSAIEGLEIVAPQLDTWIVPLSIIVLTLLFMIQKH
                     GTAMVGKLFAPIMLTWFLILAGLGLRSIIANPEVLHALNPMWAVHFFLEYKTVSFIAL
                     GAVVLSITGVEALYADMGHFGKFPIRLAWFTVVLPSLTLNYFGQGALLLKNPEAIKNP
                     FFLLAPDWALIPLLIIAALATVIASQAVISGVFSLTRQAVRLGYLSPMRIIHTSEMES
                     GQIYIPFVNWMLYVAVVIVIVSFEHSSNLAAAYGIAVTGTMVLTSILSTTVARQNWHW
                     NKYFVALILIAFLCVDIPLFTANLDKLLSGGWLPLSLGTVMFIVMTTWKSERFRLLRR
                     MHEHGNSLEAMIASLEKSPPVRVPGTAVYMSRAINVIPFALMHNLKHNKVLHERVILL
                     TLRTEDAPYVHNVRRVQIEQLSLTFWRVVASYGWRETPNVEEVFHRCGLEGLSCRMME
                     TSFFMSHESLILGKRPWYLRLRGKLYLLLQRNALRAPDQFEIPPNRVIELGTQVEI"
     gene            2178..2597
                     /gene="rbsD"
                     /locus_tag="JN001_003294"
     CDS             2178..2597
                     /gene="rbsD"
                     /locus_tag="JN001_003294"
                     /EC_number="5.4.99.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709562.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-ribose pyranase"
                     /protein_id="HAY9054423.1"
                     /translation="MKKGTVLNSDISSVISRLGHTDTLVVCDAGLPIPKSTTRIDMAL
                     TQGVPSFMQVLGVVTNEMQVEAAIIAEEIKQHNPQLHETLLTHLEQLQKHQGNTIEIR
                     YTTHEQFKQQTAESQAVIRSGECSPYANIILCAGVTF"
     gene            2605..4074
                     /gene="rbsA"
                     /locus_tag="JN001_003295"
                     /pseudo
     CDS             2605..4074
                     /gene="rbsA"
                     /locus_tag="JN001_003295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418205.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter ATP-binding protein RbsA"
     gene            4079..5044
                     /gene="rbsC"
                     /locus_tag="JN001_003296"
     CDS             4079..5044
                     /gene="rbsC"
                     /locus_tag="JN001_003296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002882531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter permease"
                     /protein_id="HAY9054424.1"
                     /translation="MTTQTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTIN
                     NLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLALTGAVAASIVGIEVNALVAVA
                     AALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADL
                     FGWFGIGRPLGVPTPVWIMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNK
                     IKIIVYSLCGLLASLAGTIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIV
                     GTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ"
     gene            5069..5955
                     /gene="rbsB"
                     /locus_tag="JN001_003297"
                     /pseudo
     CDS             5069..5955
                     /gene="rbsB"
                     /locus_tag="JN001_003297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312720.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ribose ABC transporter substrate-binding protein
                     RbsB"
     gene            6081..7010
                     /gene="rbsK"
                     /locus_tag="JN001_003298"
     CDS             6081..7010
                     /gene="rbsK"
                     /locus_tag="JN001_003298"
                     /EC_number="2.7.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribokinase"
                     /protein_id="HAY9054425.1"
                     /translation="MQNAGSLVVLGSINADHILNLQSFPTPGETVTGNHYQVAFGGKG
                     ANQAVAAGRSGANIAFIACTGDDSIGESVRQQLATDNIDITPVSVIKGESTGVALIFV
                     NGEGENVIGIHAGANAALSPALVEAQRERIANASALLMQLESPLESVMAAAKIAHQNK
                     TIVALNPAPARELPDELLALVDIITPNETEAEKLTGIRVENDEDAAKAAQVLHEKGIR
                     TVLITLGSRGVWASVNGEGQRVPGFRVQAVDTIAAGDTFNGALITALLEEKPLPEAIR
                     FAHAAAAIAVTRKGAQPSVPWREEIDAFLDRQR"
     gene            7014..8006
                     /gene="rbsR"
                     /locus_tag="JN001_003299"
     CDS             7014..8006
                     /gene="rbsR"
                     /locus_tag="JN001_003299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose operon transcriptional repressor RbsR"
                     /protein_id="HAY9054426.1"
                     /translation="MATMKDVARLAGVSTSTVSHVINKDRFVSEAITAKVEAAIKELN
                     YAPSALARSLKLNQTHTIGMLITASTNPFYSELVRGVERSCFERGYSLVLCNTEGDEQ
                     RMNRNLETLMQKRVDGLLLLCTETHQPSREIMQRYPTVPTVMMDWAPFDGDSDLIQDN
                     SLLGGDLATQYLIDKGHTRIACITGPLDKTPARLRLEGYRAAMKRAGLNIPDGYEVTG
                     DFEFNGGFDAMRQLLSHPLRPQAVFTGNDAMAVGVYQALYQAELQVPQDIAVIGYDDI
                     ELASFMTPPLTTIHQPKDELGELAIDVLIHRITQPTLQQQRLQLTPILMERGSA"
     gene            complement(7972..9399)
                     /locus_tag="JN001_003300"
     CDS             complement(7972..9399)
                     /locus_tag="JN001_003300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HAY9054427.1"
                     /translation="MSDKKKRSMAGLPWIAAMAFFMQALDATILNTALPAIAHSLNRS
                     PLAMQSAIISYTLTVAMFIPVSGWLADRFGTRRIFTLAVSLFTLGSLACALSNSLPQL
                     VVFRVIQGIGGAMMMPVARLALLRAYPRNELLPVLNFVAMPGLVGPILGPVLGGVLVT
                     RATWHWIFLINIPIGIAGLLYARKHMPNFTTARRRFDITGFLLFGLSLVLFSSGIELF
                     GEKIVASWIALTVIVTSIGLLLLYILHARHTPNPLISLDLFKTRTFSIGIVGNIATRL
                     GTGSVPFLMPLMLQVGFGYQAFIAGCMMAPTALGSIIAKSMVTQVLRRLGYRHTLVGI
                     TVIIGLMIAQFSLQSPAMAIWMLILPLFILGMAMSTQFTAMNTITLADLTDDNASSGN
                     SVLAVTQQLSISLGVAVSAAVLRVYEGMEGTTTVEQFHYTFITMGIITVASAAMFMLL
                     KTTDGNNLIKRQRKSKPNRVPSESE"
     gene            complement(9422..10114)
                     /locus_tag="JN001_003301"
     CDS             complement(9422..10114)
                     /locus_tag="JN001_003301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312724.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HAY9054428.1"
                     /translation="MPLSAQQLAAQKNLSYVLAEKLAQRILKGEYEPGTILPGEIELG
                     EQFGVSRTAVREAVKTLTAKGMVLPRPRIGTRVMPQSNWNFLDQELLTWWMTEENFHQ
                     VIDHFLVMRICLEPQACLLAATVGTAEQKAHLNTLMAEMAALKKNFRRERWIEVDMAW
                     HEHIYEMSANPFLTSFASLFHSVYHTYFTSITSDTVIKLDLHQAIVDAIIQSDGDAAF
                     KTCQALLRSPDK"
BASE COUNT         2579 a         2536 c         2775 g         2631 t
ORIGIN      
        1 caaagggggg tatttttctt tgagccaggt taatgtggcc gcatttagga gtacgatttt
       61 gccgttaatc gtgcatactg tgcgcttttt tgtgggccaa gggactaagc acacatttca
      121 tatttcaacg aaagactagt ctatgagcac tgataataag caatcattgc ccgcgattac
      181 cctcgcggcg attggagttg tctacggcga tattggtacc agcccgttat atacacttcg
      241 tgaatgtttg tccggccagt ttggttttgg cgttgaacgc gatgccgtgt ttggcttttt
      301 atcgctgatc ttctggctgc taatctttgt ggtttccatt aaatatctca ccttcgtgat
      361 gcgggcagat aacgccggtg agggggggat cctgacgttg atgtcgcttg ccgggcgtaa
      421 tacgtcggcg cgaaccacat caatgctggt gattatgggg ctaatcggcg gcagcttttt
      481 ctatggtgaa gtcgtcataa cacccgctat ttcggtgatg tcagccattg aaggtctgga
      541 aatcgtcgcc ccgcagctgg atacctggat agttcccctc tcaattatcg ttctcacttt
      601 attatttatg attcaaaaac atggcacggc tatggtcggt aagctgtttg cgccgatcat
      661 gctgacctgg tttttgattc tggcaggact ggggttacgt agcattattg ctaacccgga
      721 agtgctgcat gcgctgaatc caatgtgggc ggtgcatttc ttccttgaat acaaaacggt
      781 ttcttttatt gcattagggg cagtggtgtt gtcgattacg ggggtcgagg cgctgtatgc
      841 tgatatgggg cactttggta agttccctat tcgcctggcg tggttcaccg tcgtattacc
      901 ttccttgacc cttaattact tcggtcaggg agcgctgttg ttaaagaacc cggaagcgat
      961 taagaacccg ttcttcctgt tggcaccgga ctgggcgctg atcccgctgc tgatcatcgc
     1021 cgcactggcg acggtaattg cctcgcaggc ggttatctct ggcgtcttct cattgacgcg
     1081 tcaggcggta cgtctgggat atttgtcgcc gatgcgcatt attcacacct ccgaaatgga
     1141 gtcagggcaa atctatattc cgtttgtgaa ctggatgctc tatgtcgcgg tcgtgattgt
     1201 gattgtcagc tttgagcact ccagcaacct ggcggcggcg tacgggattg cggtgaccgg
     1261 aaccatggtg ctgacgtcta ttctctcgac taccgtggca cgtcagaact ggcactggaa
     1321 taagtatttt gttgcgctga tcctgattgc tttcctttgt gtcgatattc cattgttcac
     1381 cgctaacctc gataaactgc tctccggcgg ttggttgcca ttgagcctcg gtacggtgat
     1441 gtttatcgtg atgaccacct ggaagagcga gcgtttccgc ttgctgcggc ggatgcatga
     1501 acatggtaac tctctggaag cgatgattgc ttcgctggag aaatcaccgc ctgttcgcgt
     1561 gcccgggacc gcggtgtata tgtcgcgtgc aatcaacgtc attccctttg cgctgatgca
     1621 taaccttaaa cataacaagg tattgcatga gcgggtgatt ctgttaactc tgcgtaccga
     1681 agacgcgcca tatgtccata atgtccgtcg ggtacagatt gaacaactgt cgctcacttt
     1741 ctggcgcgtg gtggcaagtt atggttggcg agaaacgcca aacgtggaag aagttttcca
     1801 ccgctgcggt ctggaaggat taagttgccg gatgatggaa acctccttct ttatgtcgca
     1861 tgagtcgttg atcctcggca aacgcccgtg gtatttgcgt ctgcgcggca agctgtactt
     1921 gctgctgcaa cgtaatgcgc tgcgtgcacc agatcaattt gaaatcccgc caaacagggt
     1981 tatcgaactg ggtactcagg tcgaaatcta acgccagacg cctcctttct ccataagggg
     2041 gcgtttttgt tttcatggtt aatcaccatg taaaacgttt cgaggttgat cacatttccg
     2101 taacgtcacg atggttttcc caactcagtc aggattaaac tgcgggtcag cgaaacgttt
     2161 cgctgatgga gaaaaaaatg aaaaaaggca ccgttcttaa ttctgatatt tcatcggtga
     2221 tctcccgtct gggacatacc gatacgctgg tggtgtgtga tgctggttta cccatcccca
     2281 aaagtacaac gcgtatcgat atggcattaa cccagggtgt accttctttt atgcaggtgc
     2341 tgggcgtcgt tacaaatgaa atgcaggtcg aggctgccat tatcgcggaa gagatcaaac
     2401 aacataatcc gcaactccac gaaacgttgc tcactcacct tgagcagctg caaaaacacc
     2461 agggaaatac cattgaaatt cgttacacca cgcatgaaca attcaaacaa caaaccgcag
     2521 aaagtcaggc ggtaattcgc agcggagaat gttctccgta tgcgaatatc attctctgtg
     2581 ctggcgtgac gttctgaggc cgtcatggaa gcattacttc agcttaaagg catcgataaa
     2641 gccttcccgg gcgtaaaagc cctctcgggc gctgcgttaa atgtctatcc gggccgcgtg
     2701 atggcgctgg tgggcgaaaa cggcgcgggt aaatccacca tgatgaaagt gcttactggt
     2761 atctatgctc gcgatgccgg cacgctttta tggctgggga aagaaacgac atttaccggg
     2821 ccgaaatctt cccaggaagc cgggattggg attatccatc aggaactgaa cctgatcccg
     2881 cagttgacca ttgccgaaaa cattttcctc ggtcgtgagt ttgttaatcg ctttggcaaa
     2941 attgactgga aaaccatgta tgccgaagcg gataaattgc tggctaaact taacctgcgc
     3001 tttaaaagcg acaagctggt gggcgatctt tccatcggtg accagcaaat ggttgaaatc
     3061 gccaaagtgc tgagctttga gtcgaaagtc atcattatgg atgaaccgac cgatgcgctg
     3121 accgataccg aaaccgaatc cctgttccgc gtcatccgcg aactaaaatc gcaaggccgc
     3181 ggtattgtct atatctccca ccgcatgaaa gaaatcttcg agatttgcga tgccgttacc
     3241 gtttttcgtg acgggcaatt tattgctgag cgcgaagtgg catcactgac cgaagattcg
     3301 ctgattgaga tgatggtggg tcgcaagctg gaagatcaat atccacacct ggacaaagcg
     3361 ccgggagata tccgcctgaa agtcgataat ctctgcggac ctggcgttaa cgatgtctct
     3421 tttactttac gcaaaggcga aattcttggc gtctctggtt tgatgggcgc aggtcgtacc
     3481 gaactgatga aagtgctcta cggcgcacta ccgcgcacca gcggttacgt caccctggat
     3541 gggcatgaag tcgttacccg ttcaccgcag gatggcctgg caaacggcat tgtgtatatc
     3601 tccgaagacc gtaaacgtga cggtttagtg ttgggcatgt cagtaaaaga gaacatgtcg
     3661 ctgacagcgc tgcgctactt cagccgcgct ggcggcagtt tgaagcatgc cgatgaacag
     3721 taggctgtga gtgatttcat tcgtctgttt aatgtgaaaa caccgtcgat ggaacaggca
     3781 attggtctgc tttccggtgg caatcagcaa aaagtgttga tccttgatga acctacccgt
     3841 ggcgtagatg tcggcgcgaa aaaagagatc tatcaactga ttaaccagtt caaagccgat
     3901 ggcttgagca tcattctggt gtcatcggag atgccagaag tattaggcat gagcgatcgc
     3961 atcatcgtca tgcatgaagg gcatctcagc ggggaattta ctcgtgagca ggccacccag
     4021 gaagtgttaa tggctgccgc tgtgggcaag cttaatcgcg tgaatcagga gtaaaaaaat
     4081 gacaacccag actgtctctg gtcgccgtta tttcacgaaa gcgtggctga tggagcagaa
     4141 atcgcttatc gctctgctgg tgctgatcgc gattgtctcg acgttaagcc cgaacttttt
     4201 caccatcaat aacttattca atattctcca gcaaacctcg gtgaacgcca ttatggcggt
     4261 cgggatgacg ctggtgatcc tgacttcggg catcgacttg tctgtaggtt ctctgttggc
     4321 gctaaccggc gcagttgctg catctatcgt cggcattgaa gtcaatgcgc tggtggctgt
     4381 cgctgctgct ctcgcgttag gtgccgcaat tggtgcggta accggggtga ttgtagcgaa
     4441 aggtcgcgtt caggcgttta tcgctacgct ggttatgatg cttttactgc gcggcgtgac
     4501 catggtttat accaacggta gcccagtgaa taccggcttt actgagaacg ccgatctgtt
     4561 tggctggttt ggtattggtc gtccgctggg cgtaccgacg ccagtctgga tcatggggat
     4621 tgtcttcctc gcggcctggt acatgctgca tcacacgcgt ctggggcgtt acatctacgc
     4681 gctgggcggc aacgaagcgg caacgcgtct ttctggtatc aacgtcaata aaatcaaaat
     4741 catcgtctat tctctttgtg gtctgctggc atcgctggcc gggaccattg aagtggcgcg
     4801 tctctcctcc gcacaaccca cggcggggac tggctatgag ctggatgcta ttgctgcggt
     4861 ggttctgggc ggtacgagtc tggcgggcgg aaaaggtcgc attgttggga cgttgatcgg
     4921 cgcattaatt cttggcttcc ttaataatgg attgaatttg ttaggtgttt cctcctatta
     4981 ccagatgatc gtcaaagcgg tggtgatttt gctggcggtg ctggtagaca acaaaaagca
     5041 gtaataacga ctacaggaca tcttgaatat gaacatgaaa aaactggcta ccctggtttc
     5101 cgctgttgcg ctaagcgcca ccgtcagtgc gaatgcgatg gcaaaagaca ccatcgcgct
     5161 ggtggtctcc acgcttaaca acccgttctt tgtatcgctg aaagatggcg cgcagaaaga
     5221 ggcggataag cttggctata acctggtggt gctggactcc cagaacaacc cggcgaaaga
     5281 gctggcgaac gtgcaggact taaccgttcg cggcaccaaa attctgctga ttaacccgac
     5341 cgactccgac gcagtaggta atgctgtgaa gatggctaac caggcgaaca tcccggttat
     5401 cactcttgac cgccaggcaa cgaaaggtga agtggtgagc cacattgctt ctgataacgt
     5461 actgggtggc aaaatcgccg gtgattacat cgcgaagaaa gcgggtgaag gtgccaaagt
     5521 tatcgagctg caaggcattg ctggtacatc cgcagcccgt gaacgtggcg aaggcttcca
     5581 gcaggccgtt gctgctcaca agtttaatgt tcttgccagc cagcagattt tgatcgcact
     5641 aaaggtttga acgtaatgca gaacctgttg accgctcatc cggatgttca ggctgtattc
     5701 gcgcagaatg atgaaatggc gctgggcgcg ctgcgcgcac tgcaaactgc cggtaaatcg
     5761 gatgtgatgg tcgtcggatt tgacggtaca ccggatggcg aaaaagcggt gaatgatggc
     5821 aaactagcag cgactatcgc tcagctaccc gatcagattg gcgcgaaagg cgtcgaaacc
     5881 gcagataaag tgctgaaagg cgagaaagtt caggctaagt atccggttga tctgaaactg
     5941 gttgttaagc agtagtttta atcaggttgt atgacctgat ggtgacataa atacgtcatc
     6001 gacagatgaa cgtgtaatat aaagaaaagc agggcacgcg ccaccctaac acggtggcgc
     6061 attttatgga catcccgaat atgcaaaacg caggcagcct cgttgttctt ggcagcatta
     6121 atgctgacca cattcttaat cttcaatctt ttcctactcc aggcgaaacc gtaaccggta
     6181 accactatca ggttgcattt ggcggcaaag gcgcgaatca ggctgtggct gctgggcgta
     6241 gcggtgcgaa tatcgcgttt attgcctgta cgggtgatga cagcattggt gagagcgttc
     6301 gccagcagct cgccactgat aacattgata ttactccggt cagcgtgatc aaaggcgaat
     6361 caacaggtgt ggcgctgatt tttgttaatg gcgaaggtga gaatgtcatc ggtattcatg
     6421 ccggcgctaa tgctgccctt tccccggcgc tggtggaagc gcaacgtgag cgtattgcca
     6481 acgcgtcagc attattaatg cagctggaat caccactcga aagtgtgatg gcagcggcga
     6541 aaatcgccca tcaaaataag actatcgttg cgcttaaccc ggctccggct cgcgaacttc
     6601 ctgacgaact gctggcgctg gtggacatta ttacgccaaa cgaaacggaa gcagaaaagc
     6661 tcaccggtat tcgtgttgaa aatgatgaag atgcagcgaa ggcggcgcag gtactgcatg
     6721 aaaaaggtat ccgtactgta ctgattactt taggaagtcg tggtgtatgg gctagcgtga
     6781 atggtgaagg tcagcgcgtt cctggattcc gggtgcaggc tgtcgatacc attgctgccg
     6841 gagatacctt taacggcgcg ttaatcacgg cgttgctgga agaaaaacca ttgccagagg
     6901 cgattcggtt tgcccatgct gcagctgcga ttgccgtaac acgtaaaggc gcacaacctt
     6961 ccgtaccgtg gcgtgaagag atcgacgcat ttttagacag gcagaggtga cgcttggcta
     7021 caatgaaaga tgttgcccgc ctggcgggcg tttctacctc aacagtttct cacgttatca
     7081 ataaagatcg cttcgtcagt gaagcgatta ccgccaaagt tgaagcggcg attaaagaac
     7141 tcaattacgc gccatcagcc ctggcgcgta gcctcaaact caatcaaaca cataccattg
     7201 gcatgttgat cactgccagt accaatcctt tctattcaga actggtgcgt ggcgttgaac
     7261 gcagctgctt cgaacgcggt tatagtctcg tcctttgcaa taccgaaggc gatgaacagc
     7321 ggatgaatcg caatctggaa acgctgatgc aaaaacgcgt tgatggcttg ctgttactgt
     7381 gcaccgaaac gcatcaacct tcgcgtgaaa tcatgcaacg ttatccgaca gtgcctactg
     7441 tgatgatgga ctgggctccg ttcgatggcg acagcgatct tattcaggat aactcgttgc
     7501 tgggcggaga cttagcaacg caatatctga tcgataaagg tcatacccgt atcgcctgta
     7561 ttaccggtcc gctggataaa actccggcgc gcctgcggtt ggaaggttat cgggcggcga
     7621 tgaaacgtgc gggtctcaac attcctgatg gctatgaagt cactggtgat tttgaattta
     7681 acggcgggtt tgacgccatg cgccaactgt tatcacatcc gctgcgtcct caggccgtct
     7741 ttaccggaaa tgacgctatg gctgttggcg tttaccaggc gttatatcag gcagagttac
     7801 aggttccgca ggatatcgcg gtgattggct atgacgatat cgaactggca agctttatga
     7861 cgccaccatt aaccactatc caccaaccga aagatgaact gggggagctg gcgattgatg
     7921 tactcatcca tcggataacc cagccgaccc ttcagcaaca acgattacaa cttactccga
     7981 ttctgatgga acgcggttcg gcttagattt acgctgtctt ttgatcaaat tattaccatc
     8041 ggttgttttc agaagcatga acattgctgc tgaagcaaca gtaataatgc ccatcgtgat
     8101 aaacgtatag tggaattgtt cgacagtcgt tgtgccttcc atcccttcat aaacgcgaag
     8161 gacggccgca cttacagcaa cgcctaaact aatcgacagt tgctgcgtga ccgccagaac
     8221 actgttaccg ctgctggcgt tgtcatcggt cagatcggca agtgtgatgg tattcatcgc
     8281 ggtaaattgc gtcgacatag ccatccctaa tataaacaac ggcaagatca gcatccatat
     8341 cgccattgcc ggtgattgca aagagaactg agcgatcatt agcccaataa tcaccgtgat
     8401 ccccactaac gtatggcgat agcccagacg acgtaagact tgggtaacca tcgattttgc
     8461 aataatggaa cctaacgctg tcggtgccat catacagccg gcaataaacg cctgataacc
     8521 aaatcctacc tgtaacatca atggcataag gaacggtaca ctaccggtcc ccagacgggt
     8581 tgcaatattg cctacgatac cgatcgagaa agtgcgggtt ttaaataaat ctaatgaaat
     8641 taatgggttt ggcgtgtgtc gcgcatggag aatatagaga agcagtaacc cgatgctggt
     8701 gacaattacc gtcaaggcaa tccagctggc gacaatcttt tccccgaata gctctattcc
     8761 gcttgagaag agaacaaggc tgaggccaaa cagcaaaaag ccagtgatat cgaatctgcg
     8821 tcgtgcggtg gtgaaattgg gcatatgttt gcgcgcgtaa agaaggcccg caatacctat
     8881 ggggatattg attaaaaata tccagtgcca ggttgccctg gtgaccagca cgccgccaag
     8941 aacggggcct aaaattggcc ccaccagacc cggcatggcg acaaaattca atacaggaag
     9001 aagttcatta cgaggataag cacgcagtaa ggccagccga gcaacaggca tcatcattgc
     9061 gccgcctatc ccctgaataa cccggaagac aaccagctgt ggtagcgaat tagaaagtgc
     9121 gcaggccaga gaacccaacg tgaacagact cacggcaagg gtaaaaatgc gacgcgtacc
     9181 gaagcgatcg gctagccatc cgcttaccgg aataaacatc gccaccgtca gcgtataact
     9241 gatgatggct gattgcatcg cgagaggaga acgattaagg ctatgagcga ttgcgggtaa
     9301 ggcggtattc agaatagtgg catcaagtgc ctgcatgaag aaggccatcg ccgcgatcca
     9361 cggcaaaccc gccatactac gcttcttttt atcgctcatt caatgtcctg ttatcgggtt
     9421 atcacttatc aggtgagcgt agcagcgcct gacaagtttt aaatgccgcg tcgccatcgc
     9481 tttggataat cgcatcgaca atcgcctggt gcagatccag ctttatcact gtgtcgctgg
     9541 taattgacgt gaagtaagtg tgataaaccg aatggaatag cgaggcgaat gaggtcaaaa
     9601 acggattggc gctcatttca tagatatgct catgccaggc catatcgact tcgatccagc
     9661 gttcacggcg aaagttcttt tttaatgccg ccatttcggc cattaacgta ttgagatgcg
     9721 ccttctgttc cgcggtgcca accgttgctg ccagtaggca ggcttgcggc tccagacaga
     9781 tacgcataac cagaaagtga tcgatgacct gatgaaagtt ctcttctgtc atccaccagg
     9841 taagcaattc ctgatcaaga aaattccagt ttgattgtgg catgacccgg gtaccaattc
     9901 gcggtcgcgg taaaaccatc ccttttgccg ttaacgtttt gaccgcttcg cgtaccgctg
     9961 tacgactcac tccaaattgc tcgcccagct caatctcacc aggcaaaatg gtgccgggtt
    10021 catattcacc ttttaagatg cgttgcgcca gcttctcagc cagaacatac gaaaggtttt
    10081 tctgtgcagc taactgttgt gcgcttaaag gcattactaa tcttcctttt tctttttatt
    10141 cctccttagt atgccaccag gaagtgtgat tacggttgca aaaacggcaa attgcttgtt
    10201 ttatggcaca ttaacggggc ttttgctgaa aaagtgcgcg gtcagaaaat tattttaaat
    10261 ttcctcttgt caggccggaa taactcccta taatgcgcca ccactgacac ggaacaacgg
    10321 caaacacgcc gccgggtcag cggggttctc ctgagaattc cgacagagaa agcaaaaata
    10381 aatgcttgac tctgtagcgg gaaagcgtat tatgcacacc ccgcgccgct gagaaaaagc
    10441 gaagcggcac tgctctttaa caatttatca gacaatctgt gtgggtactc gaagatacgg
    10501 attcttaacg tcgcaagacg a
//
LOCUS       DADMJE010000147        10445 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.150, whole genome shotgun sequence.
ACCESSION   DADMJE010000147 DADMJE010000000
VERSION     DADMJE010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10445)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10445)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10445
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.150"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(9..1907)
                     /locus_tag="JN001_003302"
     CDS             complement(9..1907)
                     /locus_tag="JN001_003302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY9054429.1"
                     /translation="MSQNDIIIRTHYKSPHRLHIDSDIPTPSSELINQFARQLITLLD
                     TSDLSSMLSYCITQEFTANCRKISQNCYSTALFIINFATSPIHAENILITLHYKKEII
                     PLFLETTPIKANHLRSILDYIEQEQLTAEDRNHCMKLSKKIHREKTIQPTVNLNGSAC
                     FLQSPSDAIFCRHLSLQYALDSLRNGKGKVNLIKHYSSVESIQQHVPLVRDAEFRALL
                     RHPPAGSRVIASKDFGFALDIFFCRMMANNVSHMSAILYIDNHTLSVRLRIKQLVYGQ
                     LNYVVSVYDPNDTNVAVRGTHRTARGFLSLDKFISSGPDAQTWADRYVRNCAIAILPL
                     LPVGVPGAIFAGIASRMPFAPIHPSAMLLIMATGQTQQLITLFKQLPILPEKEIIEII
                     TAQNSVGTPALFLAMMNGHTDNVKIFMQEIQSLIYNHIIHEDNLVKLLQTKSANETPG
                     LYISMLYGFDETIDIFLNALTTPIAQELLNKKIVMDILAMKTRDGELGLFAAMENNHP
                     LCVTRFLSKINGIAFKYKLSKANIMDLLKGATAHGTPVLYIAMSKGNEDVVLSYISTL
                     NIFAKKYSFSQRQLFTLLAAKNHDNMSAVHIAIHHNHYKTVETYYAAINVISQSLSFS
                     ADELKTYL"
     gene            2429..4357
                     /gene="thrS"
                     /locus_tag="JN001_003303"
     CDS             2429..4357
                     /gene="thrS"
                     /locus_tag="JN001_003303"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010245687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HAY9054430.1"
                     /translation="MPVITLPDGSQRHYDHAVSPMDVALDIGPGLAKACIAGRVNGEL
                     VDACDLIENDAQLSIITAKDEEGLEIIRHSCAHLLGHAIKQLWPHTKMAIGPVIDNGF
                     YYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHAARETFANRGESYKVSIL
                     DENIAHDDKPGLYFHEEYVDMCRGPHVPNMRFCHHFKLMKTAGAYWRGDSNNKMLQRI
                     YGTAWADKKALNAYLQRLEEAAKRDHRKIGKQLDLYHMQEEAPGMVFWHNDGWTIFRE
                     LEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSENREYCIKPMNC
                     PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQ
                     IRDEVNGCIRLVYDMYSTFGFEKIVVKLSTRPEKRIGSDEMWDRAEADLAVALEENNI
                     PFEYQLGEGAFYGPKIEFTLYDCLDRAWQCGTVQLDFSLPSRLSASYVGEDNERKVPV
                     MIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNITDSQSEYVNELTQKLSNAG
                     IRVKADLRNEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEV
                     IEKLQQEIRSRSLKQLEE"
     gene            4361..4903
                     /gene="infC"
                     /locus_tag="JN001_003304"
     CDS             4361..4903
                     /gene="infC"
                     /locus_tag="JN001_003304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HAY9054431.1"
                     /translation="MKGGKRVQTARPNRINGEIRAQEVRLTGLEGEQLGIVSLREALE
                     KAEEAGVDLVEISPNAEPPVCRIMDYGKFLYEKSKSSKEQKKKQRVIQVKEIKFRPGT
                     DEGDYQVKLRSLIRFLEEGDKAKITLRFRGREMAHQQIGMEVLNRVKDDLQELAVVES
                     FPTKIEGRQMIMVLAPKKKQ"
     gene            5000..5197
                     /gene="rpmI"
                     /locus_tag="JN001_003305"
     CDS             5000..5197
                     /gene="rpmI"
                     /locus_tag="JN001_003305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006708231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HAY9054432.1"
                     /translation="MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHL
                     RPKAMVSKGDLGLVIACLPYA"
     gene            5250..5606
                     /gene="rplT"
                     /locus_tag="JN001_003306"
     CDS             5250..5606
                     /gene="rplT"
                     /locus_tag="JN001_003306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016169860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HAY9054433.1"
                     /translation="MARVKRGVIARARHKKILKQAKGYYGARSRVYRVAFQAVIKAGQ
                     YAYRDRRQRKRQFRQLWIARINAAARQNGISYSKFINGLKKASVEIDRKILADIAVFD
                     KVAFTALVEKAKAALA"
     gene            5729..5773
                     /locus_tag="JN001_003307"
     CDS             5729..5773
                     /locus_tag="JN001_003307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanyl--tRNA ligase operon leader peptide"
                     /protein_id="HAY9054434.1"
                     /translation="MNAAIFRFFFYFST"
     gene            6056..7039
                     /gene="pheS"
                     /locus_tag="JN001_003308"
     CDS             6056..7039
                     /gene="pheS"
                     /locus_tag="JN001_003308"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004851795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HAY9054435.1"
                     /translation="MSHLAELVASAKAAISQASDVAALDNVRVEYLGKKGHLTLQMTT
                     LRELPPEERPAAGAVINEAKEQVQQALNARKAELESAALNARLAAETIDVSLPGRRIE
                     NGGLHPVTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWF
                     DTTRLLRTQTSGVQIRTMKAQQPPIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVDTNI
                     SFTNLKGTLHDFLRNFFEEDLQIRFRPSYFPFTEPSAEVDVMGKNGKWLEVLGCGMVH
                     PNVLRNVGIDPEVYSGFAFGMGMERLTMLRYGVTDLRSFFENDLRFLKQFK"
     gene            7054..9441
                     /gene="pheT"
                     /locus_tag="JN001_003309"
     CDS             7054..9441
                     /gene="pheT"
                     /locus_tag="JN001_003309"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012905611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HAY9054436.1"
                     /translation="MKFSELWLREWVNPAIDSDALANQITMAGLEVDGVEPVAGSFHG
                     VVVGEVVECAQHPNADKLRVTKVNVGGDRLLDIVCGAPNCRQGLRVAVATIGAVLPGD
                     FKIKAAKLRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDIREYLKLDDNTIEI
                     SVTPNRADCLGIIGVARDVAVLNQLPLVEPEIVPVGATIDDTLPITVEAPEACPRYLG
                     RVVKGINVKAPTPLWMKEKLRRCGIRSIDAVVDVTNYVLLELGQPMHAFDKDRIEGGI
                     VVRMAKEGETLVLLDGTEAKLNADTLVIADHNKALAMGGIFGGEHSGVNDETQNVLLE
                     CAFFSPLSITGRARRHGLHTDASHRYERGVDPALQHKAMERATRLLIDICGGEAGPVI
                     DITNEATLPKRATITLRRSKLDCLIGHHIADEQVTDILRRLGCEVTEGKDEWQAVAPS
                     WRFDMEIEEDLVEEVARVYGYNNIPDEPVQASLIMGTHREADLSLKRVKTLLNDKGYQ
                     EVITYSFVDPKVQQMIHPGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNR
                     VRIFESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESV
                     LDLTGKLNEVEFRAEANPALHPGQSAAIYLKGERIGFVGVVHPELERKLDLNGRTLVF
                     ELEWNKLADRVVPQAREISRFPANRRDIAVVVAENVPAADILSECKKVGVNQVVGVNL
                     FDVYRGKGVAEGYKSLAISLILQDTSRTLEEEEIAATVAKCVEALKERFQASLRD"
     gene            9446..9745
                     /gene="ihfA"
                     /locus_tag="JN001_003310"
     CDS             9446..9745
                     /gene="ihfA"
                     /locus_tag="JN001_003310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HAY9054437.1"
                     /translation="MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQV
                     KLSGFGNFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKDE"
     gene            complement(10049..10189)
                     /locus_tag="JN001_003311"
     CDS             complement(10049..10189)
                     /locus_tag="JN001_003311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000078918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hok/Gef family protein"
                     /protein_id="HAY9054438.1"
                     /translation="MSQKSLTAITFCVTAILIIWMLHGSLCEIRMSFWGAEFAAFLQC
                     KQ"
BASE COUNT         2744 a         2364 c         2664 g         2673 t
ORIGIN      
        1 atagttggtt ataaatacgt ctttagttca tcagcactaa aactcaggct ttggctgatt
       61 acatttatag cagcataata tgtttctaca gttttataat gattatgatg aatggctata
      121 tgaacagctg acatgttgtc atgattttta gcggccaaca gtgtgaataa ctgacgttga
      181 ctaaaagaat atttttttgc aaaaatattc agcgtcgata tataagataa cacgacgtct
      241 tcattaccct tgctcatggc gatgtataat acaggggttc catgtgctgt agcgcctttt
      301 aataaatcca tgatgttagc tttgctcaac ttgtatttaa aggcgatgcc attaatttta
      361 gagaggaacc gtgtgacaca caaagggtga ttattttcca ttgcagcaaa caaccctagt
      421 tcaccatcac gtgttttcat tgctaaaata tccatcacta tttttttgtt taaaagctct
      481 tgtgctattg gagtggttaa tgcattcaga aagatatcga ttgtttcatc gaacccatac
      541 aacatggaga tatagagccc aggtgtttcg ttagcacttt tagtttgcag taatttaacc
      601 agattatctt catgaatgat atgattgtat atcagtgact gaatttcttg cataaatatt
      661 tttacgttgt cagtatgtcc gttcatcata gccagaaata aagcaggtgt accaacgcta
      721 ttctgcgcag ttattatttc aatgatttct ttttcaggga gtatgggcaa ctgtttgaat
      781 aatgtaataa gctgttgagt ctggcctgtg gccattatta acaacattgc cgatggatgt
      841 ataggggcaa atggcattcg tgatgcaata cccgcgaaaa tagcccctgg aactcccaca
      901 ggtaataggg gcagaatagc aattgcacag ttgcgaacat acctatcagc ccaggtctga
      961 gcatcgggac ctgaactgat gaacttatca agcgaaagaa agccccgtgc tgtcctgtgg
     1021 gtgcctctga cggcaacgtt ggtatcgttc gggtcgtaga cggacactac atagtttaat
     1081 tgtccataca ctaactgctt tattcgtagc cttactgaca aagtatgatt gtctatatat
     1141 aaaatcgcgg acatatgact gacattgttt gccatcattc gacaaaagaa aatatctaaa
     1201 gcgaagccaa aatccttact cgcgataacg cgactccctg caggaggatg gcgaagtaat
     1261 gctctgaact ccgcatcccg gactaagggg acatgctgct gtatggattc aacggaggag
     1321 taatgtttaa tcaggttgac tttgcctttt ccatttctca atgaatcaag ggcgtattgc
     1381 aatgacagat ggcgacaaaa aatagcgtca gaaggagatt gcaaaaaaca tgcactacca
     1441 ttgagattta ctgttggttg tatagttttt tctctatgga tttttttaga cagtttcata
     1501 caatggttac gatcttcggc agttaactgt tcctgctcaa tataatccag tatgcttcgc
     1561 aaatggttag ccttaatagg cgtggtttcc agaaataagg gaatgatttc ttttttatag
     1621 tgtaatgtaa taagtatatt ttctgcatgg atgggtgaag tggcaaagtt aatgataaaa
     1681 agggcagtgg agtaacaatt ttgtgatatt tttcgacagt ttgcggtaaa ttcctgagta
     1741 atacagtatg acagcatcga acttaagtca gaggtatcaa gtagggtgat gagttggcgc
     1801 gcaaattgat taataagctc tgatgaaggc gttggtatgt cgctatcgat gtgcaatcta
     1861 tgaggagact tataatgagt tctgataatg atatcgtttt gactcataat ctattcacct
     1921 tatatatact ggaggttttg aggatgatga ttaattatta tcgccagaac gaaatgtgca
     1981 cgaaaaattg ctataagaat tgtgtcactt ttatcattgt gatatgacca cttcgtcatt
     2041 aatctcatga tcgtttaaat actaccgcca aatcacgcaa cgaactttgc tggattcagt
     2101 ttatgctgct gtaaatccgc tcgcagtaaa cctttcagac gcaccgtgat gttatcagtg
     2161 gttctttaag cgttttgctg gtgtactcac tacaaacgaa ttgcgaatcg aatcaatgtg
     2221 aaacggaaag gtacaatctc ccttttttta gtgttaacat cgttcaaccg ggtggaaggt
     2281 gagaggttaa tgtctttcat ttgtgtacct gattgcgaac caatttagca tttgttggct
     2341 agatggtttc gcaatgaact gttaataaac aaatttttct ttgtatgtga tctttcgtgt
     2401 gggtcaccac tgcaaataag gatataaaat gcctgttata actcttcctg atggcagcca
     2461 acgccattac gaccacgctg taagccccat ggatgttgcg ctggacattg gtccaggtct
     2521 ggcgaaagcc tgtatcgcag ggcgcgttaa tggcgaactg gttgatgctt gcgatctgat
     2581 tgaaaacgac gcacaactgt cgatcattac cgccaaagac gaagaaggtc tggagatcat
     2641 tcgtcactcc tgtgcgcacc tgttagggca tgcgattaaa caactttggc cgcataccaa
     2701 aatggcaatc ggcccggtta ttgacaacgg tttttattac gacgttgatc ttgaccgcac
     2761 gttaacccag gaagatgtcg aagcactcga gaagcggatg catgagcttg ctgagaaaaa
     2821 ctacgacgtc attaagaaga aagtcagctg gcacgcagcg cgtgaaactt tcgccaaccg
     2881 tggggagagc tacaaagtct ccattcttga cgaaaacatc gcccatgatg acaagccagg
     2941 tctgtacttc catgaagaat atgtcgatat gtgccgcggt ccgcacgtac cgaacatgcg
     3001 tttctgccat catttcaaac taatgaaaac ggcaggggct tactggcgtg gcgacagcaa
     3061 caacaaaatg ttgcaacgta tttacggtac ggcgtgggca gacaaaaaag cacttaacgc
     3121 ttacctgcag cgcctggaag aagccgcgaa acgcgaccac cgtaaaatcg gtaaacagct
     3181 cgacctgtac catatgcagg aagaagcgcc gggtatggta ttctggcaca acgacggctg
     3241 gaccatcttc cgtgaactgg aagtgtttgt tcgttctaaa ctgaaagagt accagtatca
     3301 ggaagttaaa ggtccgttca tgatggaccg tgtcctgtgg gaaaaaaccg gtcactggga
     3361 caactacaaa gatgcaatgt tcaccacatc ttctgagaac cgtgaatact gcattaagcc
     3421 gatgaactgc ccgggtcacg tacaaatttt caaccagggg ctgaagtctt atcgcgatct
     3481 gccgctgcgt atggccgagt ttggtagctg ccaccgtaac gagccgtcag gttcgctgca
     3541 tggcctgatg cgcgtgcgtg gatttaccca agatgacgcg catatcttct gtactgaaga
     3601 acaaattcgc gatgaagtta acggatgtat ccgtttagtc tatgatatgt acagcacttt
     3661 tggcttcgag aagatcgtcg tcaaactctc cactcgtcct gaaaaacgta ttggcagcga
     3721 cgaaatgtgg gatcgtgctg aggcggacct ggcggttgcg ctggaagaaa acaacatccc
     3781 gtttgaatat caactgggtg aaggcgcttt ctacggtccg aaaattgaat ttaccctgta
     3841 tgactgcctc gatcgtgcat ggcagtgcgg tacagtacag ctggacttct ccttgccgtc
     3901 tcgtctgagc gcctcctatg tgggcgaaga caacgagcgt aaggtaccgg taatgattca
     3961 ccgcgcaatt ctggggtcga tggaacgttt catcggtatc ctgaccgaag aattcgctgg
     4021 tttcttcccg acctggcttg cgccagttca ggttgttatc atgaatatta ccgattcaca
     4081 gtctgaatac gttaacgaat tgacgcaaaa actatcaaat gcgggcattc gtgttaaagc
     4141 agacttgaga aatgagaaga ttggctttaa aatccgcgag cacactttgc gtcgcgtccc
     4201 atatatgctg gtctgtggtg ataaagaggt ggaatcaggc aaagttgccg ttcgcacccg
     4261 ccgtggtaaa gacctgggaa gcatggacgt aaatgaagtg atcgagaagt tgcaacaaga
     4321 gattcgcagc cgcagtctta aacaattgga ggaataaggt attaaaggcg gaaaacgagt
     4381 tcaaacggcg cgccctaacc gtatcaatgg cgaaattcgc gcccaggaag ttcgcttaac
     4441 aggtctggaa ggcgagcagc ttggtattgt gagtctgaga gaagctctgg agaaagcaga
     4501 agaagccgga gtagacttag tcgagatcag ccctaacgcc gagccgccgg tttgtcgtat
     4561 aatggattac ggcaaattcc tctatgaaaa gagcaagtct tctaaggaac agaagaaaaa
     4621 gcaaagagtt atccaggtta aggaaattaa attccgtcct ggtacagatg aaggcgacta
     4681 tcaggtaaaa ctccgcagcc tgattcgctt tctcgaagag ggtgataaag ccaaaatcac
     4741 gctgcgtttc cgcggtcgtg agatggcgca ccagcaaatc ggtatggaag tgcttaatcg
     4801 cgtgaaagac gatttgcaag aactggcagt ggtcgaatcc ttcccaacga agatcgaagg
     4861 ccgccagatg atcatggtgc tcgctcctaa gaagaaacag taaggccttc aagtagcact
     4921 gtctgtggag ccttcgggct tcacaggctt tgttcgcctt tgtttcgttt attaacaatg
     4981 cgaagtggaa gttattaaaa tgccaaaaat taagaccgta cgcggtgctg ctaagcgctt
     5041 caaaaaaacc ggtaaaggtg gttttaagca caagcacgct aacctgcgtc acattctgac
     5101 caaaaaagcg accaaacgta aacgtcacct gcgtccgaaa gccatggttt ccaaaggcga
     5161 tctgggcctg gtaatcgcgt gcctgccgta cgcataagcc gttaacgttt ttaacttttt
     5221 aattagaata tagatacagg agagcacata tggctcgcgt aaaacgtggt gttattgcac
     5281 gcgcacgtca caagaaaatt ttgaaacaag ctaaaggcta ctacggtgcg cgttctcgcg
     5341 tataccgcgt tgccttccag gctgttatca aagctggtca gtatgcttac cgtgaccgtc
     5401 gtcaacgtaa gcgtcagttc cgtcaactgt ggattgcacg tatcaacgca gcagcacgtc
     5461 agaacggtat ttcttacagc aaattcatca atggcctgaa aaaagcctct gttgaaatcg
     5521 accgtaagat cctggctgat atcgcagtat tcgacaaagt agcgttcacc gctctggttg
     5581 aaaaagcgaa agcagctctg gcataagcca gttgaaagag ggagctagtc tccctctttt
     5641 cgtttcaacg ccatcaaaac attgactttt atcgccgtag ccttttcaat aaaggtcttt
     5701 tgaagagtac caaaaggtaa cgcaagcaat gaatgctgct attttccgct tcttttttta
     5761 ctttagcacc tgaatccagg aggctagcgc gtgagaagag aaacggaaaa cagcgcctga
     5821 aagcctccca gtggaggctt tttttgtatg cgcgttttga aaaataaaaa gccagtctat
     5881 caggcgtaat tgtcgcagcc agtctggata cggccagcgc ggagaaaccg gagcgtattt
     5941 aagtacgtga gaatttcgag cactgcccgg gaccaaaatg gcaagtaaaa tagcctgatg
     6001 ggataggctc taagtccaac gaaccagtgt caccactgac acaatgagga aaaccatgtc
     6061 acatctcgca gaactggttg ccagtgcgaa ggcggccatt agccaggcgt cagatgttgc
     6121 cgcgttagat aatgtgcgcg tcgaatattt gggtaaaaaa gggcacttaa cccttcagat
     6181 gacgaccctg cgtgagctgc cgccagaaga gcgtccggca gctggtgcgg ttatcaacga
     6241 agcgaaagag caggttcagc aggcgctgaa tgcgcgtaaa gcggaactgg aaagcgcagc
     6301 gctgaatgcg cgtctggcgg cggaaacgat tgatgtctcc ctgccaggtc gtcgcattga
     6361 aaacggcggt ctgcatccgg ttacccgtac catcgaccgt atcgaaagtt tcttcggtga
     6421 gcttggcttt accgtggcaa ccgggccgga aatcgaagac gattatcata acttcgatgc
     6481 tctgaacatt cctggtcacc acccggcgcg cgctgaccac gacactttct ggtttgacac
     6541 tacccgcctg ctgcgtaccc agacctctgg cgtacagatc cgcaccatga aagcccagca
     6601 gccaccgatt cgtatcatcg cgcctggccg cgtttatcgt aacgactacg accagactca
     6661 cacgccgatg ttccatcaga tggaaggtct gattgttgat accaacatca gctttaccaa
     6721 cctgaaaggc actctgcacg atttcctgcg taacttcttt gaggaagatt tgcagattcg
     6781 cttccgtcct tcctacttcc cgttcaccga gccttctgca gaagttgacg tcatgggtaa
     6841 aaacggtaaa tggctggaag tgctgggttg cgggatggtg catccgaacg tgctgcgtaa
     6901 cgttggcatc gacccggaag tttactctgg tttcgccttc gggatgggga tggagcgtct
     6961 gactatgttg cgttacggcg tcaccgacct gcgttcattc ttcgaaaacg atctgcgttt
     7021 cctcaaacag tttaaataag gcaggaatag attatgaaat tcagtgaact gtggttacgc
     7081 gaatgggtga acccggcgat tgatagcgat gcgctggcga atcaaatcac tatggcgggc
     7141 ctggaagttg acggtgtaga accggttgcc ggtagcttcc acggcgtggt cgttggtgaa
     7201 gtggttgagt gtgcgcagca tccgaacgct gacaaactgc gtgtgacaaa agtgaatgtc
     7261 ggcggcgatc gcctgctgga catcgtctgt ggtgcgccaa actgccgtca gggcctgcgt
     7321 gtggcggtag ctaccattgg tgctgttctg ccgggtgatt tcaaaattaa agcggcgaaa
     7381 ctgcgtggcg aaccgtctga agggatgctg tgctccttct ctgaactggg aatttctgac
     7441 gatcacagcg gcattatcga actgcctgca gatgcgccga ttggcactga catccgcgaa
     7501 tacctgaaac tcgatgacaa caccatcgaa atcagcgtaa cgccaaaccg tgccgactgc
     7561 ttaggtatca ttggtgttgc gcgtgacgtt gccgtgctga atcagctgcc gctggttgaa
     7621 ccggaaatcg ttccggttgg tgcgaccatc gacgacacgt tgccgattac agtcgaagcg
     7681 cctgaagcct gcccgcgcta tcttggccgt gtggtaaaag gcattaacgt taaagcgcca
     7741 actccgctgt ggatgaaaga aaaactgcgt cgttgcggga tccgttctat cgatgcagtt
     7801 gttgacgtca ccaactatgt actgctcgaa ctgggccagc cgatgcacgc tttcgataaa
     7861 gatcgcattg aaggcggcat tgtggtgcgg atggcaaaag agggcgaaac gctggtgctg
     7921 cttgatggca ctgaagcgaa gctgaatgct gacactctgg tcatcgccga ccacaacaag
     7981 gcgctggcga tgggcggcat ctttggtggc gaacactctg gcgtgaatga cgaaacgcaa
     8041 aacgtcttgc tggaatgcgc tttcttcagc ccgctgtcta tcaccggtcg tgctcgtcgt
     8101 catggcctgc atactgatgc gtctcaccgt tatgagcgtg gcgttgatcc ggcactgcag
     8161 cacaaagcga tggaacgtgc gacccgtctg ctgatcgaca tctgcggtgg tgaggctggt
     8221 ccggtaattg atatcaccaa cgaagcaacg ctgccgaagc gtgcaaccat cactttacgt
     8281 cgtagcaaac tggattgcct gatcggccat catattgctg atgaacaggt aactgacatt
     8341 ctgcgtcgtc tcggctgcga agtgaccgaa ggcaaagacg agtggcaggc agttgcgccg
     8401 agctggcgtt tcgatatgga gattgaagaa gatctggtcg aagaagtcgc gcgtgtttac
     8461 ggctacaaca acatcccgga tgagccggta caggcaagcc tgattatggg tactcaccgt
     8521 gaagctgacc tgtcgctcaa gcgcgtgaaa acgctgctca acgacaaagg ctatcaggaa
     8581 gtgatcacct acagcttcgt tgatccgaaa gtgcagcaga tgatccatcc aggcgttgaa
     8641 gccttactgc tgccaagccc gatctctgtt gaaatgtcag caatgcgtct ttctctgtgg
     8701 accggcctgc tggcaaccgt ggtgtacaac cagaaccgtc agcagaaccg tgtgcgcatt
     8761 ttcgaaagcg gtctgcgttt cgtaccagat actcaggcac cgttgggcat tcgtcaggat
     8821 ctgatgttag ccggtgtgat ttgcggtaac cgttacgaag agcactggaa cctggcaaaa
     8881 gagaccgttg atttctatga tttgaaaggc gatcttgaat ccgttctcga cctgaccggt
     8941 aaactgaatg aggttgagtt ccgtgcagaa gcgaatccgg cactgcatcc ggggcaatcc
     9001 gcagcgattt atctgaaagg ggaacgtatt ggttttgttg gagttgttca tcctgaactg
     9061 gaacgtaaac tggatcttaa cggtcgcact ctggtgttcg aactggagtg gaacaagctc
     9121 gcagaccgcg tggtgcctca ggcgcgcgag atttctcgct tcccggcgaa ccgtcgtgac
     9181 atcgcggtgg tggtcgcaga aaacgttccc gcagcggata ttttatccga atgtaagaaa
     9241 gttggcgtaa atcaggtagt tggcgtaaac ttatttgacg tgtaccgcgg taagggtgtt
     9301 gcggaggggt ataagagcct cgccataagc ctgatcctgc aagataccag ccgtacactc
     9361 gaagaagagg agattgccgc taccgtcgcc aaatgtgtag aggcattaaa agagcgattc
     9421 caggcatcat tgagggattg aacctatggc gcttacaaaa gctgaaatgt cagaatatct
     9481 gtttgataag cttgggctta gcaagcggga tgccaaagaa ctggttgaac tgtttttcga
     9541 agagatccgt cgcgctctgg aaaacggcga acaggtgaaa ctctctggtt ttggtaactt
     9601 cgatctgcgt gataagaatc aacgcccggg acgtaacccg aaaacgggcg aggatattcc
     9661 cattacagca cggcgcgtgg tgaccttcag acccgggcag aagttaaaaa gccgggtcga
     9721 aaacgcttcg cccaaagacg agtaatctga tctaactaaa aaggccgctc tgcggccttt
     9781 tttctttcaa taactaattg atttataatg ttttatatct cttcgttcca cgatgcgtcc
     9841 acatttagtg gggggagggg agtaagcccg ctacattgtg ggctttgtct tatagtctga
     9901 tcactgtttc aagtcggtga ggacaccaaa aagaaccccc gcagttttta cgctgcgggt
     9961 ttgttgttca tgtctgtgag atagggtgcc ttatcgacct taccctggca accgattgac
    10021 gggggattgc tcccccgtcg cggtttcctt actgcttaca ctgtaagaac gccgcaaact
    10081 ccgctcccca gaagctcatc cgtatttcgc acagcgaacc gtgcagcatc cagatgatga
    10141 ggattgccgt cacgcagaac gtgatggccg taagcgattt ttgcgacata gcgcttgctc
    10201 ctttttcggg gaggcgctaa cctatcactt gcttagggta gacggttagg gcctcggtta
    10261 aacaaaaatg ttttccgggg cctttccaca tctggccttc aggtattccc tccgaccatc
    10321 agccgaaagg cacccgcgcg taatctatcg cttttttgtt actccggcaa ttctgctcgt
    10381 taattctgag gtaagggcaa actcatctga ttgtttcctc tgtgtgaagt tggcagttca
    10441 tgcca
//
LOCUS       DADMJE010000148        10370 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.151, whole genome shotgun sequence.
ACCESSION   DADMJE010000148 DADMJE010000000
VERSION     DADMJE010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10370
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.151"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(37..1032)
                     /gene="gapA"
                     /locus_tag="JN001_003312"
     CDS             complement(37..1032)
                     /gene="gapA"
                     /locus_tag="JN001_003312"
                     /EC_number="1.2.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HAY9054439.1"
                     /translation="MTIKVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYM
                     LKYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLT
                     DETARKHITAGAKKVVMTGPSKDNTPMFVKGANFDKYAGQDIVSNASCTTNCLAPLAK
                     VINDNFGIIEGLMTTVHATTATQKTVDGPSHKDWRGGRGASQNIIPSSTGAAKAVGKV
                     LPELNGKLTGMAFRVPTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEMKGVLGYTE
                     DDVVSTDFNGEVCTSVFDAKAGIALNDNFVKLVSWYDNETGYSNKVLDLIAHISK"
     gene            1374..1787
                     /gene="msrB"
                     /locus_tag="JN001_003313"
     CDS             1374..1787
                     /gene="msrB"
                     /locus_tag="JN001_003313"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HAY9054440.1"
                     /translation="MANKPSAEELKKNLSEMQFYVTQNHGTEPPFTGRLLHNKRDGVY
                     HCLICDAPLFHSETKYDSGCGWPSFYEPVSEESIRYIKDLSHGMQRIEIRCGNCDAHL
                     GHVFPDGPQPTGERYCVNSASLRFTDGENGEEING"
     gene            1829..2101
                     /locus_tag="JN001_003314"
     CDS             1829..2101
                     /locus_tag="JN001_003314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707337.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaC family protein"
                     /protein_id="HAY9054441.1"
                     /translation="MNLDDIINSMTPEVYQRLSTAVELGKWPDGVALTEEQKENCLQL
                     VMLWQARHNTEAQHMTIDTNGQMVMKSKQQLKEDFGISAKPIAMFK"
     gene            complement(2262..2903)
                     /gene="pncA"
                     /locus_tag="JN001_003315"
     CDS             complement(2262..2903)
                     /gene="pncA"
                     /locus_tag="JN001_003315"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310502.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HAY9054442.1"
                     /translation="MPHRALLLVDLQNDFCAGGALAVPEGDSTVEVANRLIDWCQSRG
                     EAVIASQDWHPANHGSFASQHGVEPYTPGQLDGLPQTFWPDHCVQNSEGAQLHPLLNQ
                     KAIAAVFHKGENPLVDSYSAFFDNGRRQKTSLDDWLRDHEIDELIVMGLATDYCVKFT
                     VLDALQLGYKVNVITDGCRGVNIQPQDSAHAFMEMSAAGATLYTLADWEETQG"
     gene            complement(2914..3930)
                     /gene="ansA"
                     /locus_tag="JN001_003316"
     CDS             complement(2914..3930)
                     /gene="ansA"
                     /locus_tag="JN001_003316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HAY9054443.1"
                     /translation="MQKKSIYVAYTGGTIGMQRSEQGYIPVSGHLQRQLALMPEFHRP
                     EMPDFTIHEYTPLMDSSDMTPDDWQHIAEDIKAHYDDYDGFVILHGTDTMAYTASALS
                     FMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYPINEVTLFFNNRLYRGNR
                     TTKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIY
                     PGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEASDRGIVVVNLTQCMSG
                     KVNMGGYATGNALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQNLRGEL
                     TPDD"
     gene            complement(4097..5953)
                     /gene="sppA"
                     /locus_tag="JN001_003317"
     CDS             complement(4097..5953)
                     /gene="sppA"
                     /locus_tag="JN001_003317"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707347.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HAY9054444.1"
                     /translation="MRTLWRFIAGFFKWTWRLLNFVREMVLNLFFIFLVLVGVGIWMQ
                     VSGGDSKETASRGALLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVN
                     TIRQAKDDHNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPVYAVGENYSQGQY
                     YLASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRD
                     DMSPAAREADSRWIGELWQNYLNTVAANRQIPAQQVFPSAQGLLEGLTKTGGDTAKYA
                     LENKLVDALASSAEIEKALTKEFGWSKTDKNYRAISYYDYALKTPADTGDSIGVVFAN
                     GAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGSVTASEVIRAELAAA
                     RAAGKPVVVSMGGMAASGGYWISTPANYIVANPSTLTGSIGIFGVITTVENSLDSIGV
                     HTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLVADARHSTPEQIDKIAQ
                     GHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYYVDEPTFFDKVMDNMSG
                     SVRAMLPDAFQAMLPAPLASVASTVKSESDKLAAFNDPQNRYAFCLTCANVR"
     gene            6114..6665
                     /locus_tag="JN001_003318"
     CDS             6114..6665
                     /locus_tag="JN001_003318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H nitroreductase"
                     /protein_id="HAY9054445.1"
                     /translation="MDALELLINRRSASRLAEPAPTGEQLQNILRAGMRAPDHKSMQP
                     WHFFVIEGEGRERFSAVLEQGAIAAGSDDKAIDKARNAPFRAPLIITVVAKCEENHKV
                     PRWEQEMSAGCAVMAMQMAAVAQGFGGIWRSGALTESPVVREAFGCREQDKIVGFLYL
                     GTPQLKASTSINVPDPTPFVTYF"
     gene            6782..7825
                     /gene="selD"
                     /locus_tag="JN001_003319"
     CDS             6782..7825
                     /gene="selD"
                     /locus_tag="JN001_003319"
                     /EC_number="2.7.9.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenide, water dikinase SelD"
                     /protein_id="HAY9054446.1"
                     /translation="MSENSIRLTQYSHGAGCGCKISPKVLETILHSEQAKFVDPNLLV
                     GNETRDDAAVYDLGNGTSVISTTDFFMPIVDNPFDFGRIAATNAISDIFAMGGKPIMA
                     IAILGWPINKLSPEIAREVTEGGRYACRQAGIALAGGHSIDAPEPIFGLAVTGIVPTE
                     RVKKNSTAQAGCKLFLTKPLGIGVLTTAEKKSLLKPEHQGLATEVMCRMNIAGASFAN
                     IEGVKAMTDVTGFGLLGHLSEMCQGAGVQARVDYDAIPKLPGVEEYIKLGAVPGGTER
                     NFASYGHLMGEMPREVRDLLCDPQTSGGLLLAVMPEAENEVKATAAEFGIELTAIGEL
                     VPARGGRAMVEIR"
     gene            7830..9791
                     /locus_tag="JN001_003320"
     CDS             7830..9791
                     /locus_tag="JN001_003320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HAY9054447.1"
                     /translation="MRLFIAEKPSLARAIADVLPKPHRKGDGFIECGNGQVVTWCIGH
                     LLEQAQPDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHEASEIVHAG
                     DPDREGQLLVDEVLDYLQLAPEKRQQVQRCLINDLNPQAVERAIDRLRSNSEFVPLCV
                     SALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQTPVLGLVVRRDEEIENFVA
                     KDFFEVKAHIVTPADERFTAIWQPSEACEPYQDEEGRLLHRPLAEHVVNRISGQPAIV
                     TSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYETHKLITYPRSDCR
                     YLPEEHFAGRHAVMNAISVHAPDLLPQPVVDPDIRNRCWDDKKVDAHHAIIPTARSSA
                     INLTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFLAEAGWRTLL
                     GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ
                     DKDLKKILRATDGLGTEATRAGIIELLFKRGFLTKKGRYIHSTDAGKALFHSLPEMAT
                     RPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLYQLIDQAKRTPVRQFRGIVAPGSGG
                     SADKKKAAPRKRSAKKSPPADEVGSGAIA"
     gene            9918..>10370
                     /locus_tag="JN001_003321"
     CDS             9918..>10370
                     /locus_tag="JN001_003321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416276.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054448.1"
                     /translation="MKKVLLQNHPGSEKYSFNGWEIFNSNFERMIKENKAMLLCKWGF
                     YLTCVVAVMFVFAAITSNGLNERGLITAGCSFLYLLIMMGLIVRAGFKAKKEQLHYYQ
                     AKGIEPLSIEKLQALQLITPYRFYHKQWSETLEFWPRKPEPGKDTFQYH"
BASE COUNT         2611 a         2533 c         2736 g         2490 t
ORIGIN      
        1 gaagtcgctc tttttagatc acagtttcat ctcaacttat ttggagatgt gagcgatcag
       61 gtccagaact ttgttggagt aaccggtttc gttgtcgtac caggatacca gtttcacgaa
      121 gttgtcgttc agagcgatac cagctttagc atcgaacacg gaagtgcaaa cttcgccgtt
      181 gaaatcggta gatactacgt catcttcggt gtagcccaga acgcctttca tttcgccttc
      241 agcagcggct ttaacggcag ctttgatctg ctcgtaagtt gcagcttttt ccagacgaac
      301 ggtcaggtca actacggata cgttcggggt cggaacgcgg aacgccatac cagtcagttt
      361 gccattcagt tctggcagta ctttacctac agctttagca gcaccggtag aggacgggat
      421 gatgttctgg gaagcgccgc ggccgccgcg ccagtctttg tgagacgggc catcaacggt
      481 tttctgagta gcggtagtag cgtgaacggt ggtcatcaga ccttcgatga tgccgaagtt
      541 atcgttgata actttagcca gcggagccag gcagttggtg gtgcaggaag cgttggaaac
      601 gatgtcctgg ccagcatatt tgtcgaagtt agcgccttta acgaacatcg gagtgttgtc
      661 tttagacgga ccagtcataa ccactttctt cgcaccagcg gtgatgtgtt tacgagcagt
      721 ttcgtcagtc aggaacagac cagttgcttc agcgacaacg tcaacaccaa cttcgtccca
      781 tttcaggtta gccggatcac gttcagcggt aacacggatt tttttaccgt taacgatcag
      841 atgaccgtct ttcacttcaa cggtaccgtc gaaacggccg tgagtggagt catatttcag
      901 catgtatgcc atgtaatcag cgtctaacag gtcgttgatt gcaacgatct cgatgtcaga
      961 acgtttctga gcagcacgga aaacaatgcg accgatacgg ccaaaaccgt tgatacctac
     1021 tttgatagtc atatattcca ccagctattt gttagtgaat aaaaggttgc ctgtaaaatt
     1081 acaaaaacct tacgcagcgt caagcggaat cgtgtcaatc attgcgacaa atcaatcctg
     1141 tgcctaagca ttatgcgact gactcgcctc actcttcctt tgggcttgaa accacatggg
     1201 gtcggcgccc cgaattttaa agggcaatta cgataaaaat gtgattttca tcacgattta
     1261 ggtgcagcca tttcgtcgag atcaagttta ggacaaaatt ttgccagttg gtgttaatgt
     1321 tttgttagaa tcagtcacgt aatgtgagca cgattaaagt gagatgtgag caaatggcta
     1381 ataaaccttc ggcagaagaa ctgaaaaaaa atttgtccga gatgcagttt tacgtgacgc
     1441 agaatcatgg gacagagccg ccatttacgg ggcgtttact gcataacaag cgtgacggcg
     1501 tatatcactg tttgatctgc gatgccccgc tgtttcattc cgaaaccaag tatgattccg
     1561 gctgtggctg gcccagtttc tacgaaccgg tgagtgaaga atccattcgt tatatcaaag
     1621 acttgtcaca tggaatgcag cgcatagaaa ttcgttgcgg taactgtgat gcccatctgg
     1681 ggcatgtctt tcccgacggg ccgcaaccaa caggcgaacg ttattgtgtt aactctgctt
     1741 ctttacgctt cactgatggc gaaaacggcg aagaaatcaa cggttgaaaa aacgattcag
     1801 caacttattc cacaggagcg gaaaaattat gaatcttgat gacattatca acagcatgac
     1861 gcctgaggta taccagcgtt tgtcgaccgc cgttgaactg gggaaatggc ctgatggcgt
     1921 tgcgttgacc gaggaacaaa aagagaattg cctgcaactg gtgatgctgt ggcaagcccg
     1981 ccataatacc gaagcacagc atatgacaat tgacacaaat ggtcagatgg tcatgaagag
     2041 caaacagcag ttaaaagaag attttggtat ctcagcaaag cctattgcta tgtttaagtg
     2101 aatgagttat ctagtattta agcctgttat taagggaggg caaatatact tgttcggacg
     2161 tcgtgtttta gctgcaagta ggttaaatgc aacactgaca agtattatct ggcctacaat
     2221 gtcattgagg aaatgtaggc cagagatgaa ttcaactaat attacccctg tgtctcttcc
     2281 cagtctgcca gcgtatatag cgttgcccca gctgctgaca tctccataaa cgcgtgtgca
     2341 ctgtcctggg gctggatatt cacgccacga caaccatcgg taatcacgtt caccttataa
     2401 cctaactgta acgcgtccag cacggtaaac ttcacgcaat agtcagtagc caggcccata
     2461 acgatcaatt catcgatttc atgatcgcgt aaccagtcat cgagagaggt tttctgccga
     2521 cggccgttat caaaaaaggc actgtaactg tcaactaaag gattttcgcc tttatggaac
     2581 accgctgcga tcgctttttg gttcagtaac ggatgtaatt gtgcgccttc actgttctgc
     2641 acacagtgat ctggccagaa ggtttgtggc aaaccgtcga gttggcctgg cgtataaggc
     2701 tctacaccgt gctgactggc aaaactgccg tgattcgccg gatgccagtc ctggctggcg
     2761 ataaccgctt ctccgcgcga ctggcaccag tcaataaggc ggttagcaac ctccaccgta
     2821 ctgtcacctt ccggtacggc gagcgcgcca ccagcacaga aatcattttg taaatcgacc
     2881 agtaacaggg cgcgatgggg cattgcagtc tccttaatca tccggcgtca gttcgccgcg
     2941 caggttttgg ctcatggcct tgcgaatggt ttcagtatcc agttcctggc tcagcaggta
     3001 atgcagtttg gttagcgtgg cttctacagt catatctgca ccgccaataa cgccggcatg
     3061 ggcgagggcg ttaccggtgg cataaccacc catattcact ttaccggaca tacattgtgt
     3121 caggttgacc accacaatac cgcgatcgct ggcttcttgt aattcctgca ggaaggcttt
     3181 gttttgtggc gcattaccca cgccatagga gcgcagaatc aatgctttca ctggttggcg
     3241 cagaaaattg cgcacgacat cagcagaaat ccccggataa atcgtcacta cgccaattgg
     3301 ttgtggcgtg attggatgaa cgattaattc cccttcaccg tgcggggcgg gtggcgtatt
     3361 caaacgacga atatggatac cagcttccag taacggagga aggtttggag aggcaaacgc
     3421 atcaaaacca tcggcatggg ctttggtagt gcggttgccg cgatacaatc ggttattgaa
     3481 aaagagcgtt acttcgttga tcggataatt cgccgcaacg tacaacgcat tcagcagatt
     3541 aatttgtccg tcagagcgta actcagccag cgggatttgt gaccctgtca caatgaccgg
     3601 tttaccgaga ttctcgagca tgaacgacag cgcagaggcg gtatacgcca tcgtgtcggt
     3661 accgtgtaga atgacaaaac catcatagtc gtcatagtgc gctttaatat cttcagcaat
     3721 atgctgccag tcatccggcg tcatatcaga agaatccatc aacggcgtat attcatgaat
     3781 ggtgaaatct ggcatctccg ggcgatggaa ttccggcatc agcgccagtt ggcgttgtag
     3841 atgacctgac accggaatat aaccctgctc ggaacgctgc atcccgatgg tcccgcccgt
     3901 gtaggcgacg taaattgatt tcttttgcat gatattgata tgaatgatat cgaaagagca
     3961 aaagtatata cgtgaggcag gaggagcgca cctgatacta tgcggataag gaaatatggg
     4021 gcgagacagc gggaagagga ttcgtcgagg taaaaaataa tgtggccgac gatctgtcgg
     4081 ccactcagta caagacttaa cgcacgttgg cgcaggtcag gcaaaacgca taacggtttt
     4141 gtgggtcgtt aaacgcggcc agcttgtcgc tttcactttt aacggtagag gctaccgagg
     4201 caagcggtgc aggtaacatg gcctggaacg catctggcaa cattgcccgg acagaaccag
     4261 acatgttgtc catcactttg tcgaagaagg tcggttcatc aacgtagtat tccagatgcc
     4321 actgtttcac ttttgcgagc tctgctgctt tggcaaccgc atcatcgaaa tccccgagac
     4381 tatcgaccag cccgttagct tttgcatcct gaccggtcca gacgtggccc tgggcgattt
     4441 tatcaatttg ctccggcgtc gaatgacgcg catcagcaac cagcgtgata aagcgtttat
     4501 agccattctc aatgcttaat tgcatcatct gctgcgcttc cggcggcagt gccctggtga
     4561 tagaaacatc cgccagcggt gaagttgaga caccatcagt atgaacacca atcgaatcca
     4621 gactattttc tacggtggtg atcacgccga agataccgat agaaccggtc agggtgctgg
     4681 ggttagccac aatgtaatta gctggcgtgg aaatccagta accaccagat gccgccatgc
     4741 cgcccatcga tacaaccaca ggcttacccg ctgcccgggc tgctgccagt tcagcgcgaa
     4801 tcacttcaga cgcggtaacg ctgccgcctg ggctattaac acgcaggaca atcgctttca
     4861 ctttcgggtc aaggcgagcg tcgcggattt gtgccgcagt ggtatcaccg ccaacattcc
     4921 cctgagtttc ctcgccatcc ataattgcgc cattagcgaa gacgacaccg atgctgtcac
     4981 cggtatctgc cggcgttttc aatgcgtaat cgtaataact gatggcgcga taatttttat
     5041 cagtcttact ccagccgaac tctttggtca gagctttttc gatttcggca ctcgatgcca
     5101 gtgcatcgac cagcttgttt tccagtgcat atttcgcggt atcgccaccg gttttggtta
     5161 aaccctcaag caacccttgc gcgctaggga atacctgctg agcagggatc tgccggttag
     5221 cggcaacagt attcagatag ttttgccaca gctcaccaat ccagcggctg tcagcttcgc
     5281 gggctgccgg tgacatatca tcacgaataa acggttcaac ggcagattta tacgtaccca
     5341 cgcggaacac atgggtggaa actttcagct tatccagcaa cgatttgtag tacagaccgt
     5401 tggtagcaaa accgtgcaga tcaaccacgc cttgcggtga cagccaaatt ttattggcga
     5461 aactggcgag ataatattgc ccctggctgt agttctcgcc aacggcataa accggtttcc
     5521 cgctgtcacg aaactctttc agggctttgc cgatgtactg catagacggc tggtcgccgc
     5581 ctgcgaagtt tttcagatcc atcacgatac cggtgatatt gtggtcgtcc ttcgcctggc
     5641 gaatggtgtt gacgatatca aacagtgagt tttcctgcag acgatcggaa ctggcaccaa
     5701 gcagctggcg gcttaattta ctaaaccgct gagaactgtc gggtttatcg acgatcacac
     5761 cggaaatgtc cagcagcagt gcgccacgac tggccgtttc tttcgaatca ccaccactga
     5821 cctgcatcca gatccccaca ccaaccagta cgaggaaaat aaagaacagg ttaagtacca
     5881 tttcacggac gaaattcagc agacgccacg tccatttaaa aaatccggca ataaatcgcc
     5941 aaagggttcg catgtattct cccaacttaa ggtcacacct gtcacaggcg caatagatgt
     6001 ggttatcgta atgacccaac cgacacttgt cagcaggaat tgcggactgt gctgtaacaa
     6061 aatccactct cgtgttaatt ttgtgaataa atatcacgac aggagttaat caaatggatg
     6121 cactcgaact attgatcaat cgccgtagcg cctcccgcct ggctgaaccc gcgccaacgg
     6181 gtgaacaact gcaaaacatc ctgcgtgcgg gtatgcgtgc gccggaccat aagtccatgc
     6241 aaccgtggca tttttttgtg attgaagggg aagggcgcga gcgtttcagc gccgtactgg
     6301 aacagggggc gattgctgcc ggtagtgatg acaaagctat cgacaaagcc cgtaatgcgc
     6361 cgttccgcgc accgctcatc atcacggtgg tggcgaaatg cgaagaaaat cataaagtcc
     6421 cgcgatggga acaggaaatg tctgccggat gcgcggtcat ggcgatgcaa atggcagccg
     6481 ttgcccaggg atttggcggc atctggcgca gtggcgcatt aactgaaagt ccggtagtgc
     6541 gtgaagcatt cggttgccgt gagcaggata aaattgtcgg ttttctctac ctcggcacgc
     6601 cgcagttgaa agcatctacg tcgattaacg tcccggaccc gacgccgttt gtaacttatt
     6661 tctgataatt gtcgcgaaac tgtctggatt gtgagcaaag gcgcaggaat tcagacactc
     6721 tcacttatca cttcacggaa tgagggttac catacccgga ttgcattgac aggagatgtc
     6781 catgagcgag aactcgattc gtttgaccca atacagccac ggagctggtt gcggctgtaa
     6841 aatttcccca aaagtgttgg aaaccatcct gcacagtgag caggcgaagt ttgttgatcc
     6901 gaatttgctt gtgggtaatg agacccgcga cgatgcggcg gtgtacgatc tgggcaatgg
     6961 caccagcgtt atcagtacca ccgacttctt tatgccgatc gttgataatc ctttcgattt
     7021 tggccgcatt gcggcgacta acgccatcag cgatatcttc gcgatggggg gcaaaccgat
     7081 tatggcgatt gcgatcctcg gctggccgat taacaaactt tccccggaaa ttgcccgcga
     7141 agtaaccgaa ggtggacgct atgcatgccg tcaggcgggt attgcgctgg ctggcggtca
     7201 ctccatcgat gcgccggagc cgatttttgg tctggcggta acggggatcg taccgaccga
     7261 gcgggtgaag aaaaacagca ccgcacaagc cggatgcaaa ctgttcctga cgaaaccgct
     7321 ggggatcggc gttcttacca cggctgagaa aaaatcattg ctgaaaccag aacatcaggg
     7381 actagcgacg gaagtgatgt gccggatgaa catcgcaggc gcgtcctttg ccaacatcga
     7441 aggcgtaaaa gcgatgaccg acgttacggg ctttggtctg ctgggccatt tgagcgaaat
     7501 gtgtcagggc gcaggtgtgc aggcgcgcgt tgactatgac gcgatcccaa aattgccggg
     7561 ggttgaagag tacattaagt tgggcgcagt gcctggcggc accgaacgta actttgccag
     7621 ctacggtcat ctgatgggtg aaatgccgcg tgaagtgcgc gatttgctgt gcgatccgca
     7681 aacttctggc ggtttgctgc tggcggtcat gccggaagca gaaaatgagg tcaaagctac
     7741 agccgccgag tttggcattg aactgacggc aattggcgaa ctggtgccag cgcgcggcgg
     7801 tcgtgccatg gttgagattc gttaattcaa tgcggttgtt tattgccgaa aaaccgagtc
     7861 tggcgcgcgc cattgctgat gtcctgccca aaccgcaccg gaaaggcgat ggctttatcg
     7921 agtgcggtaa tggtcaggtg gtgacctggt gtatcggtca cctgcttgag caggcgcagc
     7981 cagacgccta cgacagccgc tatgcgcgct ggaatcttgc ggatttgccg attgtcccgg
     8041 aaaagtggca attacagccc cgaccctccg tgaccaaaca acttaacgtc atcaaacgct
     8101 tcctgcatga agccagcgaa atcgttcacg ccggggaccc ggatcgtgaa gggcaactgc
     8161 tggtggatga agtgctggac tatctgcaac tggcaccgga aaagcgccag caggtgcagc
     8221 gttgcttgat aaacgacctg aacccgcagg cggttgagcg ggcgatcgac cgtcttcggt
     8281 ccaacagtga gtttgtgcca ttgtgcgttt ctgcgctggc gcgagcgcgt gccgactggc
     8341 tgtacggcat caatatgacc cgtgcgtata ccattctcgg tcgcaatgcc ggttatcagg
     8401 gcgtactttc cgtgggacgc gtgcagacac ccgtgctcgg gctggtggtg cgccgcgatg
     8461 aagagattga aaacttcgtg gcgaaagact tctttgaagt caaagcacat atcgtgacac
     8521 ctgccgatga gcggtttacc gctatctggc aaccgagcga agcgtgtgaa ccgtaccagg
     8581 atgaagaagg gcgcttgtta catcgtccac tggcggagca tgtggttaac cgcattagtg
     8641 gtcaaccagc aattgtcacc agctataacg ataaacggga atcagaatcc gcgccgctgc
     8701 ctttttcgct ttcggcgttg cagattgaag cggcaaaacg ctttggtctg agcgcgcaga
     8761 acgtgcttga tatctgccag aagctgtacg aaacgcacaa gctaatcact tatccgcgtt
     8821 ccgattgtcg ctatttgcca gaagaacatt ttgccggacg ccacgcggtg atgaatgcca
     8881 tcagcgttca tgcaccagat ctgttgccgc aaccagtggt agatccagat atacgcaacc
     8941 gctgttggga tgacaaaaag gtcgatgcac accacgccat catcccgacc gcacggagtt
     9001 ctgcgatcaa cctgacggag aacgaagcga aggtctataa cctgattgcc cgtcagtact
     9061 tgatgcagtt ctgcccggat gcggtgttcc gcaagtgtgt tatcgaactg gacattgcca
     9121 aaggcaaatt tgtcgctaaa gcgcgttttc ttgctgaagc aggctggcgc acgctgttag
     9181 gcagcaaaga gcgcgatgaa gaaaacgacg gtacgccatt gcctgtggtg gcgaaaggcg
     9241 atgagttgct gtgtgaaaaa ggtgaagtgg tagagcggca aacccagccg ccgcgccatt
     9301 ttaccgatgc aacactgctt tcggcgatga ccgggatcgc gcgctttgtg caggacaaag
     9361 atctgaaaaa gatccttcgt gcgaccgatg gtctggggac agaagcaacc cgtgccggga
     9421 ttattgaact gctgttcaag cgtggttttc tgaccaaaaa agggcgctat atccactcta
     9481 ccgacgccgg aaaagcgtta ttccattcgc tgccagaaat ggcgacgcga ccggacatga
     9541 ccgcgcactg ggaatcggtg ctgacgcaaa tcagcgaaaa gcagtgtcgc tatcaggact
     9601 ttatgcagcc gctggtgggg acgctatatc agcttattga tcaagccaaa cgtacgccgg
     9661 tgcggcagtt tcgcggcatt gtggctccgg gcagtggtgg cagtgctgat aagaaaaagg
     9721 ctgcaccgcg taaacgtagt gcgaaaaaaa gtccgccagc agatgaagtc ggaagcgggg
     9781 cgatagcgta agcgagtgaa tctttcgtgc tattcgagtc atattctgaa atatccagcg
     9841 aatcaagaaa attcgttgga tatttttttg catggataaa attatcgcct ctaaagtatg
     9901 taataacagg gaatgtgatg aaaaaagttt tattacaaaa ccatcctggg agcgagaagt
     9961 attcttttaa tggctgggaa atatttaata gtaattttga acggatgatt aaagaaaata
    10021 aggccatgct gctttgtaag tgggggtttt atttaacatg tgttgtcgct gtaatgtttg
    10081 tgttcgcagc gataacatcc aacggtttga atgaaagagg cctgattacc gcgggatgct
    10141 cttttcttta tctattaatt atgatggggc ttattgttcg ggccggtttt aaagcaaaaa
    10201 aagaacaact gcattattat caggctaaag gtattgagcc gctcagtatc gagaagttac
    10261 aggcgctaca attgatcaca ccttatcgat tctatcataa gcaatggtct gaaacgctgg
    10321 agttctggcc gcgaaagcct gaacctggca aagatacctt ccaatatcat
//
LOCUS       DADMJE010000149        10330 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.152, whole genome shotgun sequence.
ACCESSION   DADMJE010000149 DADMJE010000000
VERSION     DADMJE010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10330)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10330)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10330
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.152"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            121..987
                     /gene="folD"
                     /locus_tag="JN001_003322"
     CDS             121..987
                     /gene="folD"
                     /locus_tag="JN001_003322"
                     /EC_number="1.5.1.5"
                     /EC_number="3.5.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HAY9054449.1"
                     /translation="MAAKIIDGKTIAQQVRSEVAQKVQARIAAGLRAPGLAVVLVGSN
                     PASQIYVASKRKACEEVGFVSRSYDLPETTSEAELLELIDALNADNTIDGILVQLPLP
                     AGIDNVKVLERIHPDKDVDGFHPYNVGRLCQRAPRLRPCTPRGIVTLLERYNIDTFGL
                     NAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLIVAVGKPGFIPG
                     DWIKEGAIVIDVGINRLENGKVVGDVVFEDAAKRASYITPVPGGVGPMTVATLIENTL
                     QACVEYHDPQGE"
     gene            989..1201
                     /gene="ybcJ"
                     /locus_tag="JN001_003323"
     CDS             989..1201
                     /gene="ybcJ"
                     /locus_tag="JN001_003323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308617.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated protein YbcJ"
                     /protein_id="HAY9054450.1"
                     /translation="MATFSLGKHPHVELCDLLKLEGWSESGAQAKIAIAEGQVKVDGA
                     VETRKRCKIVAGQTVSFAGHSVQVVA"
     gene            1309..1830
                     /locus_tag="JN001_003324"
     CDS             1309..1830
                     /locus_tag="JN001_003324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY9054451.1"
                     /translation="MPTVITHAAVPLCIGLGLGSKVIPPRLLFAGIILAMLPDADVLS
                     FKFGVAYGNVFGHRGFTHSLVFAFVVPLLCVLIGRRWFRAGLIRCWLFLTVSLLSHSL
                     LDSVTTGGKGVGWLWPWSDERFFAPWQVIKVAPFALSRYTTPYGHQVIISELMWVWLP
                     GMVLMGMLWWRRR"
     gene            complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JN001_003325"
     CDS             complement(1866..3251)
                     /gene="cysS"
                     /locus_tag="JN001_003325"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005125243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HAY9054452.1"
                     /translation="MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTF
                     VAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHKDFDA
                     LNILRPDMEPRATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDL
                     DQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLG
                     NHFDIHGGGSDLMFPHHENEIAQSTCAHDGQYVNYWMHSGMVMVDREKMSKSLGNFFT
                     VRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAG
                     GEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLG
                     LLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKDWAAADAARDRLNEMGIVLE
                     DGPQGTTWRRK"
     gene            3425..3919
                     /gene="ppiB"
                     /locus_tag="JN001_003326"
     CDS             3425..3919
                     /gene="ppiB"
                     /locus_tag="JN001_003326"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase B"
                     /protein_id="HAY9054453.1"
                     /translation="MVTFHTNHGDIVIKTFDDKAPETVKNFLDYCREGFYNNTIFHRV
                     INGFMIQGGGFEPGMKQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINV
                     VDNDFLNFSGESLQGWGYCVFAEVVEGMDVVDKIKGVATGRSGMHQDVPKEDVIIESV
                     TVSE"
     gene            3922..4644
                     /gene="lpxH"
                     /locus_tag="JN001_003327"
     CDS             3922..4644
                     /gene="lpxH"
                     /locus_tag="JN001_003327"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HAY9054454.1"
                     /translation="MATLFIADLHLCVEEPAITAGFLRFLAGEARKADALYILGDLFE
                     AWIGDDDPNPLHRQMAAAIKAVSDSGVPCYFIHGNRDFLLGKRFARESGMTLLPEEKV
                     LELYGRRVLIMHGDTLCTDDAGYQAFRAKVHKPWLQMLFLALPLFVRKRIVARMRANS
                     KEANSSKSLAIMDVNQNAVVSAMEKHQVQWLIHGHTHRPAVHELIANQQPAFRVVLGA
                     WHTEGSMVKVTADDVELIHFPF"
     gene            4762..5271
                     /gene="purE"
                     /locus_tag="JN001_003328"
     CDS             4762..5271
                     /gene="purE"
                     /locus_tag="JN001_003328"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HAY9054455.1"
                     /translation="MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSA
                     HRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVD
                     SLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVL
                     ENPDPRGAA"
     gene            5268..6335
                     /gene="purK"
                     /locus_tag="JN001_003329"
     CDS             5268..6335
                     /gene="purK"
                     /locus_tag="JN001_003329"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HAY9054456.1"
                     /translation="MKQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPAAVPFQQS
                     VITAEIERWPETVLTRELARHPAFVNRDVFPIIADRLTQKQLFDKLHLPTAPWQLLAD
                     RSEWPAVFDRLGELAIVKRRTGGYDGRGQWRLRANETEQLPAECYGECIVEQGINFSG
                     EVSLVGARGFDGSTVFYPLTHNLHQDGILRTSVAFPQANAQQQAQAEEMLSAIMQELG
                     YMGVMAMECFVTPQGLLINELAPRVHNSGHWTQNGASISQFELHLRAITDLPLPQPVV
                     NNPSVMINLIGSDANYDWLKLPLVHLHWYDKEVRPGRKVGHLNLTDSDTSRLTATLEA
                     LIPLLPPEYASGVIWAQSKFS"
     gene            complement(6472..7363)
                     /locus_tag="JN001_003330"
                     /pseudo
     CDS             complement(6472..7363)
                     /locus_tag="JN001_003330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706399.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
     gene            complement(7360..8175)
                     /locus_tag="JN001_003331"
     CDS             complement(7360..8175)
                     /locus_tag="JN001_003331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2877 domain-containing protein"
                     /protein_id="HAY9054457.1"
                     /translation="MTIIHPLLASSSAPNYRQSWRLAGVWRRAINLMTESGELLTLHR
                     QGSGFGPGGWVLRRAQFDALCGGLCGNERPQVVAQGIRLGRFTVKQPQRYCLLRITPP
                     SHPQPLAAAWMQRAEETGLFGPLAMAASDPLTAELRQFRHCFQAALNGVKTDWRHWLG
                     KGPGLTPSHDDTLSGMLLAAWYYGALDARAGRPFFACSDNLQLVTTAVSVSYLRYAAQ
                     GYFASPLLHFVHALSCPKRTAVAIDSLLALGHTSGADTLLGFWLGQQLLQGKP"
     gene            complement(8186..9445)
                     /locus_tag="JN001_003332"
     CDS             complement(8186..9445)
                     /locus_tag="JN001_003332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009029994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1116 domain-containing protein"
                     /protein_id="HAY9054458.1"
                     /translation="MFTSVAQANAAVIEQIRRARPHWLDVQPAFSLISELNEGKTLLH
                     AGPPMRWQEMTGPMKGACVGGCLFEGWAKDEAQALAMLEQGEVNFIPCHHVNAVGPMG
                     GITSASMPMLVVENVTDGNRAYCNLNEGIGKVMRFGAYGEDVLTRHRWMRDVLMPVLS
                     AALGRMEHGIDLTAMMAQGITMGDEFHQRNIASSALLMRTLAPQIARLDHDKQHIAEV
                     IDFLSVTDQFFLNLAMAYCKAAMDAGAMIRAGSIVTAMTRNGNMFGIRVSGLGERWFT
                     APVNTPQGLFFTGFSQEQANPDMGDSAITETFGIGGAAMIAAPGVTRFVGAGGMEAAR
                     AVSEEMAEIYLERNMQLQIPGWDFQGACLGLDIRRVVETGITPLINTGIAHKEAGIGQ
                     IGAGTVRAPLACFEQALEALAESMGIG"
     gene            complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JN001_003333"
                     /pseudo
     CDS             complement(9455..10279)
                     /gene="fdrA"
                     /locus_tag="JN001_003333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314544.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT         2271 a         2936 c         2775 g         2348 t
ORIGIN      
        1 aaccttcgca agaggtcgct tcacgcgata aatctgaaac gaaacctgac agcgcgcccc
       61 gcttctgaca aaataggcgc atccccttcg acctacgtaa cagatggaat cctctctctg
      121 atggcagcaa agattattga cggtaaaacg attgcgcagc aggtgcgctc tgaagttgct
      181 caaaaagttc aggcgcgtat tgcagccgga ctgcgggcac caggactggc cgttgtgctg
      241 gtgggtagta accctgcatc gcaaatttat gtcgcaagca aacgcaaggc ttgtgaagaa
      301 gtcgggttcg tctcccgctc ttatgacctc ccggaaacca ccagcgaagc ggagctgttg
      361 gagcttatcg atgcgctgaa tgccgacaac accatcgatg gcattctggt tcaactgccg
      421 ttaccggcgg gtattgataa cgtcaaagtg ctggaacgta ttcatccgga caaagacgtg
      481 gacggtttcc atccttataa cgtcggtcgt ctgtgccagc gcgcgccgcg tctgcgtccc
      541 tgcaccccgc gcggtatcgt cacgctgctt gagcgttaca acattgatac cttcggcctt
      601 aacgccgtgg tgattggcgc atcgaatatc gtcggtcgtc caatgagcat ggaactgttg
      661 ctcgcaggtt gcaccactac cgtgactcac cgtttcacta aaaatctgcg tcaccacgta
      721 gaaaatgccg atctgttgat cgttgccgtc ggcaagccgg gctttattcc tggtgactgg
      781 atcaaagaag gcgcaattgt gattgatgtc ggcatcaacc gtctggaaaa tggcaaagtt
      841 gtgggcgacg tcgtgtttga agacgcggct aaacgcgcct catacattac gcctgttccg
      901 ggcggcgttg gcccgatgac ggttgccacg ctgattgaaa acacgcttca ggcgtgcgtt
      961 gaatatcatg atccacaggg tgagtaacat ggcgacattt tctttaggta aacatccgca
     1021 cgttgagctg tgcgatttgc tgaaactgga aggctggagc gaaagcggcg cgcaggcgaa
     1081 aatcgcgatt gccgaaggcc aggtgaaagt cgacggtgcg gttgaaacgc gcaaacgctg
     1141 caaaatcgtc gccggtcaga cagtgagttt tgcaggtcac agcgtacagg ttgttgcctg
     1201 atccctttcc cggcctgtat caacaggccg gttctctttt cagacttttg ccctctacgc
     1261 cccgttcatc catgctgata gcatcgacat tttgccgaag cgaccatcat gccaaccgtt
     1321 attacgcacg ccgccgttcc cctatgcatt ggtttagggt tgggttcgaa agtcatccct
     1381 ccgcgtctgt tatttgccgg aatcatcctg gcgatgctgc ccgacgccga cgtattgtcg
     1441 tttaaatttg gcgttgctta cggcaatgtt tttggtcatc gcgggtttac ccattcgctg
     1501 gtgtttgcgt ttgttgtccc gctgttatgt gtgctgattg gacgccgatg gttcagggct
     1561 gggcttattc gctgctggct gtttttaacc gtctcgttgc tatcgcacag cttgctggat
     1621 tcggtaacca ctggcggtaa gggcgttggc tggctgtggc cgtggtcaga tgaacgcttt
     1681 ttcgctccct ggcaggtgat taaagtcgcg ccgtttgcat tgtctcgtta caccacgccg
     1741 tacgggcatc aggtgataat ttctgaattg atgtgggtgt ggttgccggg gatggtgctt
     1801 atgggaatgt tgtggtggcg caggcgataa ccggatgcga aaactcgcat ccggcaacag
     1861 cgcaattact tacgacgcca ggtggtccct tgcgggccat cttccagcac gatccccatc
     1921 tcgttaagac ggtcacgcgc cgcatctgcc gccgcccagt ctttcgcttt acgggcatcc
     1981 agacgctgtt gaattaacgc ttcaatctca gccacttcgc tgtcgtctgc ctgcgcgccg
     2041 ctttgcagga acgcttccgg ttcttgctcc agcaggccca atacagcgga aagtttacgc
     2101 aggtgagatg ccattgcatt cgccgctgcc atatcttctg ctttcagacg gtttacttca
     2161 cgcgccatat caaacagtac ggaataggct tccggggtgt tgaaatcgtc gtccatcgct
     2221 tcaataaagc gcgcttcaaa cgcttcgcca ccggcaggcg caacggtttt atctgtgccg
     2281 cgcagcgcag tgtagagacg ctccagcgcc gcacgcgtct gcttcaggtt ctcttcgctg
     2341 tagttcaact ggctgcgata gtggcccgac atcaggaagt aacgcacggt ttccgcgtcg
     2401 tagtatttca gcacatcgcg cacggtaaag aagttaccca gcgatttgga catcttctcg
     2461 cggtcaacca tcaccattcc ggagtgcatc cagtagttca catactgacc atcatgggca
     2521 caggtggact gcgcgatttc gttctcgtgg tgcgggaaca tcaggtctga accgccgccg
     2581 tggatatcaa agtggttacc cagctgcttg cagttcatgg ccgaacattc aatgtgccag
     2641 ccaggacgac ccgcgcccca cggagacggc cagctcggtt cgccctcttt cgacatcttc
     2701 cacagaacga agtccatcgg gttgcgtttg tcatcaacca cgtcaacgcg cgcgccagcc
     2761 tgcagctggt cgagatcctg acgcgacagc acgccataag tcggatcggt cgggacgtcg
     2821 aacatcacgt cgccgttgtc agccacataa gcgtgacctt tggcgatcag ttgttcagtg
     2881 agttcaataa tttctgcgat atggtgcgtc gcgcgcggct ccatatccgg gcgcagaatg
     2941 ttcaaagcat caaaatcttt gtgcatttcg gcgatcatgc gatccaccag cgccacaaag
     3001 ctttcgccat tttcattggc gcgtttgatg attttgtcgt cgatatcggt aatgttgcgc
     3061 acatacttca gcttatagcc gaggaaacgc agatagcgcg caaccacgtc aaaagcaaca
     3121 aaggtacgcc cgtgaccgat atgacagaga tcgtaaacgg tgattccaca cacgtacatg
     3181 ccgacttccc cggcgtgaat aggcttaaat tcctcttttt ggcgtgtcag agtattgaag
     3241 atttttagca tcgaagattc cgtttagaca tgtgtgggta attgagttgc gtataatacc
     3301 catatttccc gcgcgaatca gcatacattg cgtgatgatc cgatcgtgcg gttatgctat
     3361 aacaccaccc tatatatgac ccgaaccggg ttgaagcacc aatcaaacgg aacaggatgc
     3421 aaaaatggtt actttccaca ccaatcacgg cgatattgtc atcaaaactt ttgacgataa
     3481 agcacctgaa acagttaaaa acttcctgga ctactgccgc gaaggttttt acaacaacac
     3541 cattttccac cgtgttatca acggctttat gattcagggc ggcggttttg aaccgggcat
     3601 gaaacaaaaa gccaccaaag aaccgatcaa aaacgaagcc aacaacggtc tgaaaaatac
     3661 ccgtggtacg ctggcaatgg cccgtactca ggctccgcac tctgcaactg cacagttctt
     3721 catcaacgtg gttgataacg acttcctgaa cttctctggc gaaagcctgc aaggttgggg
     3781 ctactgcgtg tttgctgaag tggttgaagg catggacgtg gtagacaaaa tcaaaggtgt
     3841 tgcaaccggt cgtagcggta tgcaccagga cgtgccaaaa gaagacgtta tcattgaaag
     3901 cgtgaccgtt agcgagtaat cgtggcgaca ctctttattg cagatcttca tctctgcgtg
     3961 gaagaaccgg cgatcaccgc cggttttctg cgttttttag cgggggaagc tcgcaaggcc
     4021 gacgcgctgt atattcttgg cgatctgttt gaagcgtgga ttggcgacga cgatcccaat
     4081 ccactccatc gccagatggc ggcagcgatc aaagcggtgt ccgattccgg cgttccctgt
     4141 tatttcattc atggcaaccg tgattttctg ctcggcaaac gctttgcccg tgaaagtggc
     4201 atgacgttat tgccggaaga aaaggtgctc gaactttatg gccgccgggt gttgattatg
     4261 catggcgaca cgctgtgcac cgatgacgcg ggttatcagg cttttcgcgc caaagtccac
     4321 aaaccctggc tgcaaatgct attcctcgcc ctgccgttgt ttgtgcgcaa acgcattgtc
     4381 gcgcgaatgc gcgcgaacag caaagaagcc aacagcagta aatcgctggc gatcatggac
     4441 gttaaccaaa acgcagtggt cagtgcgatg gaaaaacatc aggtgcaatg gctgatccac
     4501 gggcataccc atcgcccggc ggtgcatgaa cttatcgcca accagcaacc tgcttttcgc
     4561 gtggtactgg gtgcctggca tacggaaggt tcgatggtga aagtcacggc ggatgacgtt
     4621 gagctgattc attttccgtt ttaaaaaaac cacaactttg ctgatttcac agccacgcaa
     4681 ccgttttcct tgctctcttt ccgtgctatt ctctgtgccc tctaaagccg agagttgtgc
     4741 accacaggag ttttaagacg catgtcttcc cgcaataatc cggcgcgtgt cgccatcgtg
     4801 atggggtcca aaagcgactg ggctaccatg cagttcgccg ccgaaatctt cgaaatcctg
     4861 aatgtcccgc accacgttga agtggtttct gctcaccgca cccccgataa actgttcagc
     4921 ttcgccgaaa gcgccgaaga gaacggttat caggtgatta ttgcgggcgc aggtggcgca
     4981 gcgcacctgc caggcatgat tgccgccaaa acgctggtgc cggtgctggg cgtgccagta
     5041 cagagcgccg cactgagcgg tgtcgatagc ctctactcca tcgtacaaat gccgcgcggc
     5101 attccggtgg gtacgctggc gattggtaaa gctggcgcgg caaacgcggc attactggca
     5161 gcacaaattc tcgcgactca cgataaagag ctacaccagc gtctgaatga ctggcgcaaa
     5221 gcccagaccg acgaagtgct ggaaaatccg gacccgcgag gtgcggcatg aaacaggttt
     5281 gcgtcctcgg taacgggcag ttaggccgta tgctgcgtca ggcaggcgaa ccgttaggca
     5341 ttgctgtctg gccggtcggg ctggacgctg aaccggcggc ggtgcctttt caacaaagcg
     5401 tgattaccgc tgagatcgaa cgctggccgg aaaccgtatt aacccgcgag ctggcgcgtc
     5461 atccggcctt tgtgaaccgc gatgtgttcc cgattattgc tgaccgtctg actcagaagc
     5521 agcttttcga taagctccac ctgccgaccg cgccgtggca gttacttgcc gatcgcagcg
     5581 agtggcctgc ggtgtttgat cgtttaggtg aactggcgat tgttaagcgt cgcactggtg
     5641 gctatgacgg tcgcggtcaa tggcgtttac gcgccaatga aaccgaacag ttaccggcag
     5701 agtgttacgg cgaatgtatt gtcgagcagg gcattaactt ctctggtgaa gtgtcgctgg
     5761 ttggcgcgcg cggctttgat ggcagcaccg tgttttatcc gctgacgcat aacctgcatc
     5821 aggacggtat tttgcgcacc agcgtcgctt ttccgcaggc caacgcacag cagcaggcgc
     5881 aagccgaaga gatgctgtcg gcgattatgc aggagctggg ctatatgggc gtgatggcga
     5941 tggagtgttt tgtcaccccg caaggtctgc tgatcaacga actggctccg cgtgtgcata
     6001 acagcggtca ctggacacaa aacggtgcca gcatcagcca gtttgagctg catctgcggg
     6061 cgattaccga tctgccgtta ccgcaaccag tagtgaataa tccgtcggtg atgatcaatc
     6121 tgattggtag cgatgcgaat tatgactggc tgaaattgcc gctggtgcat ctgcactggt
     6181 acgacaaaga agtccgtccg gggcgtaaag tggggcatct gaatttgacc gacagcgaca
     6241 catcgcgtct gactgcgacg ctggaagcct taatcccgct gctgccgcca gagtatgcca
     6301 gcggcgtgat ttgggcgcag agtaagttca gttaagcagg tgctcatttg attgccggat
     6361 gcggcgtaaa cgccttatcc ggcttaccgc tccggtaccc attgtaggcc tgataagacg
     6421 cgtcaagcgt cgaatcaggc atggtgcacc gattgccgga tgctctcatc actacagcga
     6481 aatacaggtc cccgcttcgc ccgccagcgt ctcttcaatt cgcgataacg ccccaatcca
     6541 cgcgggttta ctacggcttc tgacataacc actcaccgcc gttaccttcg gccccatcga
     6601 accatcggct ttggcaaatg gcgctaactc atccggtgtg gcatggcgaa tggcacgttg
     6661 ctgcggcgtt ccccagtttt catataccgc atcagcatcg gtgaggatca ccagtccatc
     6721 ggcattaatc tgctcggcga gcaacgcagt ggcgagatct ttatcaatca ccgcttcact
     6781 ccctgcccca tcttccgtca caggcacacc gccgccgcca ctgcaaatca ccacatgccc
     6841 ctctttgagc aacaactcga tggcttcgct gtcgagaatt ttacgcggtt gcggagacgc
     6901 caccacccgg cgcaaatatt taccatcacg tttcatctgc cagccgtaag ccgcttccag
     6961 tgcctcttgt tcttctggct gataaaccgg accaataaat ttctctggct gcaaaaacgc
     7021 cggatcatca ggcgaaacct caatgcgcgt cagcaccgtc gtaacaggcg gtatctgcgg
     7081 ctgtgcgctc aagctctgcg ccagcatata gcctcatccc ctggctttcc gccaccagca
     7141 catccagcgg atacggttct acctctttcc acgccagatt ctgtaacgcc agcagcccca
     7201 cctgcggccc gttgccgtga acaatcgcca gccgataaga acgggccagg cgtgccagcg
     7261 cgggtacagc actggcgata ttgcgatatt gattttccgc cgtcagcgcc tcaccgcgct
     7321 ggagtaaggc gttgccccca agagctacaa ccagtgtttt catggttttc cttgtaataa
     7381 ttgttggcca agccagaacc ccagcagcgt atctgcccct gacgtatgcc ccagcgccag
     7441 cagcgaatca atcgcaacag cggtacgttt cgggcaactc agagcatgga caaagtgcag
     7501 gagtggcgag gcgaaatatc cttgcgcggc ataacgtaag taactgacgc tcaccgctgt
     7561 ggtaacgagt tgaagattgt cggaacaggc aaaaaacggg cgaccggcgc gcgcatctaa
     7621 agcgccataa taccaagccg ccagcagcat tccgctcaac gtgtcatcat gacttggcgt
     7681 taatccgggg cctttaccca gccagtgccg ccagtcggtc ttaacgccat tgagcgcggc
     7741 ctgaaaacag tgacgaaact ggcgtaattc agcggtcagc ggatcgcttg ccgccatcgc
     7801 cagtggtccg aaaagtccgg tttcctccgc gcgttgcatc catgcagctg caagcggttg
     7861 aggatgcgaa ggcggcgtaa tacgcagcaa acaataacgc tgtggctgtt taaccgtgaa
     7921 acgcccgagg cgaatccctt gagccacaac ctgtggtcgt tcattgccgc ataatccacc
     7981 gcataacgca tcgaattgcg cgcggcgaag cacccatcct ccggggccga aaccactacc
     8041 ctgacgatgc agcgttaaca gttcgccgct ttccgtcatc aggttaatcg cccgccgcca
     8101 cactcccgct aaccgccagg actggcgata attcggtgcg ctactgctgg caagcagagg
     8161 atggatgatc gtcattgcgc gttcctcaac caatccccat gctttcagcc agtgcttcca
     8221 gcgcctgttc aaagcacgcc agcggtgccc gcacggtgcc tgcgccaatc tgcccgatcc
     8281 ccgcctcttt atgggcgata ccggtattga tgagtggcgt aatgccggtt tctaccacgc
     8341 gacgaatatc cagccccagg cacgcgccct gaaaatccca gcctgggatc tgcaactgca
     8401 tattgcgttc aaggtaaatt tccgccatct cttcagatac cgccctggcc gcttccatgc
     8461 cacccgcacc gacaaagcgc gttacgccag gcgctgcgat cattgccgca cctccgatac
     8521 caaaggtttc ggtaatcgcg ctatcgccca tatccgggtt cgcctgctcc tgcgagaagc
     8581 cggtgaaaaa cagaccttgc ggagtgttta caggcgcagt aaaccagcgt tcacccagcc
     8641 cgcttacccg aatcccgaac atattgccgt tgcgggtcat agccgtaacg atgctgcctg
     8701 cgcggatcat cgcgccagca tccatcgccg ccttgcagta ggccatcgcg aggttgagga
     8761 agaactgatc ggtcacgctg aggaaatcga tcacttccgc aatgtgctgt ttatcatgat
     8821 cgaggcgagc aatttgtggg gccagcgtac gcattaacag tgctgaggaa gcaatattgc
     8881 gttgatggaa ctcatcgccc atcgtaatgc cctgcgccat catcgccgtg agatcgatac
     8941 cgtgctccat gcgccccagc gccgcgctta atactggcat taacacatcg cgcatccagc
     9001 gatggcgagt caggacatct tcgccgtaag cgccaaaacg catcactttg ccgatacctt
     9061 cgttgaggtt gcagtacgcc cggttgccgt cggtcacgtt ctcgaccacc agcatcggca
     9121 tactggcaga agtaatgccg cccattggcc cgacggcatt cacatggtga caaggaatga
     9181 agttcacttc cccctgctcc agcatcgcca gtgcctgcgc ttcatctttc gcccagcctt
     9241 cgaacagaca tccgcccacg cacgcccctt tcatgggtcc ggtcatctcc tgccagcgca
     9301 ttggcggccc ggcgtgaagc agtgttttgc cctcgtttag ttcgctgata agtgaaaaag
     9361 ccggttgcac atccagccag tgtggacgag cacgacgaat ttgttcgata accgcagcat
     9421 tggcttgcgc cactgatgta aacatgggaa ccccttattg caaacgttct aataaacgag
     9481 ccagtttttt attgccgccg gcgactggcg accattggta atgcacaacc ggtttgctgg
     9541 cgctttgtag ctccagcgca aagctgcgta atccgatgtt aatcacggcg acgttttcca
     9601 gtaatgacgg tgtatgttgc tgtgcggcag gcgagagcgg ataaattaac gctgccgcca
     9661 gcaaggtggc ttccggcagc gaactcacta ccgcgatccc cgcatcttcc agcgtggcga
     9721 tttgctgcga gcggcattgc gggtcacgtt cagtgcctgt caccgtggca atggcataca
     9781 gtggttgatt atctgaacgc gcggcacagg ctttttgcta ggcgcttacc agcgaggcgg
     9841 caggatcggc agtcgcaccg aagccaatca cgacatcaag tagcaatacg cgcacttgtg
     9901 gtttagcgcc gagatcggca attaactggt tgcgtaaggc tgggtcgatc atcggatggg
     9961 gacgcccgac ggtgtagaaa tcatcgccga ggtcaataat ctggtgacca tcggcgtcga
    10021 gcatcatgcc gtgatgatgg gtatcgtcgg cttccacgcc aaggtgtcca gcaagtaatc
    10081 ccgccgcttc ggcagccagc gtaccgccgg tatacaaacc gcaaataaat ccgctgctga
    10141 caggcgctat tgcgttacgt cgcgccgtga cgcgtgaaag caggcaagcc aggcgtgcgg
    10201 cctcatccag cgaggaggca aaccagacat tctcgtcgcg ggccaccgcc ggggtataac
    10261 ctaaaaacag cgccaccatc ggtttgccgg ttgctttcat ggcattaaca attttcagac
    10321 gcacagcttc
//
LOCUS       DADMJE010000150        10205 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.153, whole genome shotgun sequence.
ACCESSION   DADMJE010000150 DADMJE010000000
VERSION     DADMJE010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10205)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10205)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10205
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.153"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JN001_003334"
     CDS             complement(265..1296)
                     /gene="rsmC"
                     /locus_tag="JN001_003334"
                     /EC_number="2.1.1.172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(1207)-N(2))-methyltransferase
                     RsmC"
                     /protein_id="HAY9054459.1"
                     /translation="MSAFTPASEVLLRHSDDFEQSRILFAGDLQDDLPARLDTAASRA
                     HTQQFHHWQVLSRQMGDNARFSLVATVDDVADCDTLIYYWPKNKPEAQFQLMNLLSLL
                     PVGTDIFVVGENRSGVRSAEQMLADYAPLNKVDSARRCGLYFGRLEKQPVFDADKFWG
                     EYSVDGLTVKTLPGVFSRDGLDVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS
                     PKIRLTLCDVSAPAVEASRATLAANCVEGEVFASNVFSEVKGRFDMIISNPPFHDGMQ
                     TSLDAAQTLIRGAVRHLNSGGELRIVANAFLPYPDVLDETFGFHEVIAQTGRFKVYRA
                     IMTRQAKKG"
     gene            1399..1812
                     /gene="holD"
                     /locus_tag="JN001_003335"
     CDS             1399..1812
                     /gene="holD"
                     /locus_tag="JN001_003335"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit psi"
                     /protein_id="HAY9054460.1"
                     /translation="MTSRRDWQLQQLGITQWSLRRPGALQGEIAIAIPAHVRLVMVAN
                     DLPALTDPLVSDVLRALTVSPDQVLQLTPEKIAMLPQGSRCNSWRLGTDEPLSLEGAQ
                     VASPALTELRANPTARAALWQQICTYEHDFFPRND"
     gene            1781..2227
                     /gene="rimI"
                     /locus_tag="JN001_003336"
     CDS             1781..2227
                     /gene="rimI"
                     /locus_tag="JN001_003336"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HAY9054461.1"
                     /translation="MNTISSLETTDLPAAYHIEQRAHAFPWSEKNFASNQGERYLNFQ
                     LTQNGKMAAFAITQVVLDEATLFNIVVDPDYQRQGLGRVLLKHLIDELEKRGVATLWL
                     EVRASNAAAIALYESLGFNEATIRRNYYPTTDGREDAIIMALPISM"
     gene            2242..2919
                     /gene="yjjG"
                     /locus_tag="JN001_003337"
     CDS             2242..2919
                     /gene="yjjG"
                     /locus_tag="JN001_003337"
                     /EC_number="3.1.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine 5'-nucleotidase"
                     /protein_id="HAY9054462.1"
                     /translation="MKWDWIFFDADETLFTFDSFTGLQRMFLDYSVTFTAEDFQDYQA
                     VNKPLWVDYQNGAITSLQLQHGRFESWAERLKVEAGLLNDAFINAMAEICTPLPGAVS
                     LLNAIRGNAKIGIITNGFSALQQVRLERTGLRDYFDLLVISEEVGIAKPNKKIFDYAL
                     ELAGNPDRSRVLMVGDTAESDILGGINAGLATCWLNAHHLEQPEGIAPTWTVSSLHEL
                     EQLLCKH"
     gene            3010..4599
                     /gene="prfC"
                     /locus_tag="JN001_003338"
     CDS             3010..4599
                     /gene="prfC"
                     /locus_tag="JN001_003338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HAY9054463.1"
                     /translation="MTLSPYLQEVAKRRTFAIISHPDAGKTTITEKVLLFGQAIQTAG
                     TVKGRGSNQHAKSDWMEMEKQRGISITTSVMQFPYHDCLVNLLDTPGHEDFSEDTYRT
                     LTAVDCCLMVIDAAKGVEDRTRKLMEVTRLRDTPILTFMNKLDRDIRDPMELLDEVEN
                     ELKIGCAPITWPIGCGKLFKGVYHLYKDETYLYQSGKGHTIQEVRIVKGLNNPDLDAA
                     VGEDLAQQLRDELELVKGASNEFDKELFLAGEITPVFFGTALGNFGVDHMLDGLVEWA
                     PAPMPRQTDTRTVEASEDKLTGFVFKIQANMDPKHRDRVAFMRVVSGKYEKGMKLRQV
                     RTAKDVVISDALTFMAGDRSHVEEAYPGDILGLHNHGTIQIGDTFTQGEMMKFTGIPN
                     FAPELFRRIRLKDPLKQKQLLKGLVQLSEEGAVQVFRPISNNDLIVGAVGVLQFDVVV
                     SRLKSEYNVEAVYESVNVATARWVECADAKKFEEFKRKNESQLALDGGDNLAYIATSM
                     VNLRLAQERYPDVQFHQTREH"
     gene            4992..5597
                     /gene="osmY"
                     /locus_tag="JN001_003339"
                     /pseudo
     CDS             4992..5597
                     /gene="osmY"
                     /locus_tag="JN001_003339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418793.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone OsmY"
     gene            5724..5885
                     /locus_tag="JN001_003340"
     CDS             5724..5885
                     /locus_tag="JN001_003340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002887716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1328 domain-containing protein"
                     /protein_id="HAY9054464.1"
                     /translation="MFRWGIIFLVIALIAAALGFGGLAGTAAGAAKIVFVVGIILFLV
                     SLFMGRKRP"
     gene            6007..7080
                     /locus_tag="JN001_003341"
     CDS             6007..7080
                     /locus_tag="JN001_003341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin family protein"
                     /protein_id="HAY9054465.1"
                     /translation="MGQRIPVTLGNIAPLSLRPFQPGRIALVCEGGGQRGIFTAGVLD
                     EFMRAQFNPFDLYLGTSAGAQNLSAFICNQPGYARKVIMRYTTKREFFDPLRFVRGGN
                     LIDLDWLVEATASQMPLQMDTAARLFDSGKSFYMCACRQDDYAPNYFLPTKQNWLDVI
                     RASSAIPGFYRSGVSLEGINYLDGGISDAIPVKEAARQGAKTLVVIRTVPSQMYYTPQ
                     WFKRMERWLGDSSLQPLVNLVQHHETSYRDIQQFIEKPPGKLRIFEIYPPKPLHSIAL
                     GSRIPALREDYKLGRLCGCYFLATVGKLLTEKAPLTRHLVPVVTPESIVIPPAPVAND
                     TLVAEVIDAPQANDPTFNNEDLA"
     gene            7077..7859
                     /locus_tag="JN001_003342"
     CDS             7077..7859
                     /locus_tag="JN001_003342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313363.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY9054466.1"
                     /translation="MICRFIDTHCHFDFLPFSGDEEASLQRAAQAGVGKIIVPATEAE
                     NFARVQALAEKYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEVGLDL
                     FGDDPQLERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFS
                     GSLQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQG
                     QPNRPEQAVRVFDVLCELRPEPEDEIAEVLLNNTYALFSVSG"
     gene            complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JN001_003343"
     CDS             complement(8073..8936)
                     /gene="yjjW"
                     /locus_tag="JN001_003343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjjW family glycine radical enzyme activase"
                     /protein_id="HAY9054467.1"
                     /translation="MNSRCALVSKIIPFSCVDGPGSRLALFLQGCNLRCKNCHNPWTM
                     GRCNDCGECVPQCPHQALQIVDGKVLWNAVVCEQCDTCLKMCPQHATPMAQSMSVDEV
                     LSHVRKAVLFIEGITVSGGEATTQLPFVVALFTAIKNDPQLRHLTCLVDSNGMLSETG
                     WEKLLPVCDGAMLDLKAWGSECHQHLTGRDNQQIKRSICLLAERGKLAELRLLVIPDQ
                     VDYLHHIDELATFIKRLGDVPVRLNAFHAHGVYGEAQSWASATPEDVEPLADALKVRG
                     VSRLIFPALYL"
     gene            complement(8908..>10205)
                     /locus_tag="JN001_003344"
     CDS             complement(8908..>10205)
                     /locus_tag="JN001_003344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YjjI family glycine radical enzyme"
                     /protein_id="HAY9054468.1"
                     /translation="WLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPY
                     VRILTQDEIDVRIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNL
                     TFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGG
                     GSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLV
                     KEGLINPERFVPMFGMYGLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVA
                     NTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGI
                     SDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYR
                     AEGSRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ"
BASE COUNT         2410 a         2664 c         2749 g         2382 t
ORIGIN      
        1 ccatcaattc ttaaaaagaa ttgctaccac ggaggcgcat tctagtggtt ttcagctttt
       61 cgtcaatagt taattatcgc cggaggtgta attgctggaa aaatgtccat caggaaacta
      121 gcgtgcaggt ttggtaggca tgcgggggca gatgccagat gcgacgctgg cgcgtcttat
      181 ctggcctacg aagggctaac gtgcaggttt tgtaggtcgg ataaggcgtt tacgccgcat
      241 ccggcaaggc ttgcggcggg atacttaacc ttttttcgcc tggcgggtca taatggcgcg
      301 atataccttg aaacgcccgg tttgcgcaat cacttcatgg aagccaaatg tttcatccag
      361 cacgtccgga taaggcagga aggcgttcgc tacaattcgc agctcgccgc cactattaag
      421 atgacgcacc gcgccgcgaa tcagcgtttg cgccgcatcc aggctggttt gcatcccatc
      481 gtggaacggc gggttggaga tgatcatatc aaaacgacct ttcacctcgg aaaagacgtt
      541 gctggcaaag acttcacctt caacacagtt ggccgcaagt gttgcgcggc tggcttctac
      601 cgctggcgca gagacatcgc acaaggtgag acgaattttc ggcgaatggc gcgcaaaggc
      661 aactgaaagc acccccgcgc cacagccgac atccagcact ttacctttcg tgtgcggagt
      721 taacgtcgag agcagcaact ggctaccgac atccagaccg tcgcggctaa acacgccagg
      781 cagcgttttg actgtcaggc catcgacgct gtattcgccc cagaatttat cggcatcaaa
      841 taccggctgt ttttccagac gaccaaaata gaggccacag cgacgagcgc tgtcgacttt
      901 attcaacggc gcataatctg ccagcatctg ctcggcgctg cgcacgccgc tgcggttctc
      961 gccaacgaca aaaatatctg tccccactgg cagcagagaa agtaaattca tcaactggaa
     1021 ctgggcttcc ggtttgttct tcggccagta gtaaatcagc gtatcgcaat ctgcgacgtc
     1081 atccaccgtg gcgaccagac tgaaacgggc gttatccccc atctggcggc ttaatacctg
     1141 ccagtggtgg aattgctggg tatgagcacg gctggccgcg gtatctaaac gcgcgggcag
     1201 gtcatcctgt aagtctccgg caaacagaat acggctttgt tcgaaatcat cactgtgacg
     1261 cagcaagact tcacttgccg gggtaaatgc agacatggaa tgctcctcaa ttgatactgg
     1321 cggcgattat agccatatgt tggcgcggta tcgacgaatt tgctatattt gcgcccctga
     1381 caacaggagc gattcgctat gacatcccga cgagactggc agttacagca actgggcatt
     1441 acccagtggt cgctgcgtcg ccctggcgcg ttgcaggggg agattgccat tgcgatcccg
     1501 gcacacgtcc gtctggtgat ggtggcaaac gatcttcccg ccctgaccga tcctttagtg
     1561 agcgatgttc tgcgcgcatt aaccgtcagc cccgatcaag tgctgcaact gacgccagaa
     1621 aaaatcgcga tgctgccgca aggcagtcgc tgcaacagct ggcggttggg tactgacgaa
     1681 ccgctatcac tggaaggcgc tcaggtggca tcaccggcgc tcaccgaatt acgggcaaac
     1741 ccaacggcac gcgccgcgtt atggcaacag atttgcacat atgaacacga tttcttccct
     1801 cgaaacgact gatttaccag cggcttacca cattgaacaa cgcgcccacg cctttccgtg
     1861 gagtgaaaaa aactttgcca gcaaccaggg cgagcgttat ctcaactttc agttaacgca
     1921 aaacggcaaa atggcggcgt ttgctattac gcaagtggtg ctggatgaag ctacattgtt
     1981 caatattgtg gtcgatcctg actatcagcg tcagggattg ggaagggtgc tgctgaaaca
     2041 tctgatcgac gaactggaaa aacgcggcgt ggcgacacta tggctggaag tccgtgcttc
     2101 aaacgctgcc gccattgccc tgtacgaaag tttaggcttt aacgaggcga cgattcgccg
     2161 caattactac cccaccacgg acggtcgcga agacgccatc atcatggcgt tgccaatcag
     2221 tatgtaagac aaggtggaat aatgaagtgg gactggattt tctttgatgc cgatgaaacg
     2281 ctgtttacct ttgactcatt caccggcctg cagcggatgt ttcttgatta cagcgtcacc
     2341 tttaccgctg aagattttca ggactatcag gccgttaaca agccactgtg ggtggattat
     2401 caaaacggcg cgatcacttc attacagctt cagcacgggc gtttcgagag ctgggccgaa
     2461 cggctgaaag ttgaagcagg cttgcttaac gatgccttta ttaatgcgat ggcggaaatc
     2521 tgcacgccgc tgccgggcgc ggtttctctg cttaacgcca ttcgtggcaa cgctaaaatc
     2581 ggcatcatca ccaacggttt tagcgccttg cagcaagtgc gtctggaacg gacgggcctg
     2641 cgtgattact ttgatttgct ggtgatttcc gaagaagttg gcattgccaa accgaataag
     2701 aaaattttcg attatgcgct ggaactggcg ggcaatcctg accgttcacg cgtgctgatg
     2761 gttggcgaca ctgccgagtc cgatattctc ggtggcatca acgccgggct tgcgacttgc
     2821 tggctgaatg cgcaccatct cgagcaacca gaaggcatcg cgcccacctg gaccgtttca
     2881 tcgttgcacg aactggagca gctcctgtgt aaacactgat tgcctccccc ccgttgatgg
     2941 gtaaaatagc cgcaattttt cgttttcaac aagcgcggcg cgatgccgct tactcaagaa
     3001 gaaagaatta tgacgttgtc tccttatttg caagaggtgg cgaagcgccg cacttttgcc
     3061 attatttctc acccggacgc cggtaaaact accatcaccg agaaggtgct gctgttcgga
     3121 caggccattc agaccgctgg tacagtaaaa ggccgtggtt ccaaccagca cgctaagtcg
     3181 gactggatgg agatggaaaa gcagcgtggg atctccatta ctacgtctgt gatgcagttt
     3241 ccgtatcacg attgcctggt taacctgcta gacaccccgg ggcacgaaga cttctcggaa
     3301 gatacctatc gtaccctgac agcggtggac tgctgcctga tggttatcga cgctgcaaaa
     3361 ggtgttgaag atcgtacccg taagctgatg gaagttaccc gtctgcgcga cacgccgatc
     3421 ctcaccttta tgaacaaact tgaccgtgat atccgcgacc cgatggaact gctcgatgaa
     3481 gttgagaacg agctgaaaat tggctgcgca ccgatcacct ggccgattgg ctgcggcaag
     3541 ctgtttaaag gcgtttacca cctttataaa gacgaaacct atctttatca gagcggtaaa
     3601 ggccacacga ttcaggaagt ccgtattgtt aaagggctga ataacccgga tctcgacgct
     3661 gcggttggtg aagatctggc acagcagcta cgtgacgaac tggaactggt gaaaggcgcg
     3721 tctaacgagt tcgacaaaga actgttcctt gcgggcgaaa tcactccggt attcttcggt
     3781 actgcgctgg gtaacttcgg cgttgatcat atgctggatg gcctggtgga gtgggcccct
     3841 gcgccgatgc cgcgtcagac tgatacccgt accgtagagg cgagcgaaga caaattaacc
     3901 ggcttcgtat ttaaaattca ggccaatatg gacccgaaac atcgcgaccg cgtggcgttt
     3961 atgcgcgtag tatccggtaa atatgaaaaa ggcatgaagc tgcgccaggt gcgtactgcg
     4021 aaagatgtgg ttatctccga cgcgctgacc tttatggcgg gcgaccgttc gcacgttgaa
     4081 gaagcgtatc cgggcgatat cctcggcctg cacaaccacg gcactattca gatcggcgac
     4141 acctttaccc agggtgagat gatgaagttc accggtattc cgaacttcgc accagaactg
     4201 ttccgtcgta tccgcctgaa agatccgctg aagcaaaaac agctgctcaa agggctggta
     4261 cagctttccg aagagggcgc ggtgcaggtg ttccgtccga tctccaacaa cgatttgatc
     4321 gttggtgctg ttggtgtgct gcagtttgat gtggtggtat cgcgcctgaa gagcgaatac
     4381 aacgttgaag cagtatatga atcagtcaac gttgccactg cccgctgggt agaatgtgcg
     4441 gacgcgaaga aattcgaaga gttcaagcgt aagaacgaaa gccaactggc gcttgatggc
     4501 ggcgataacc tcgcttacat cgctaccagc atggtcaacc tgcgcctggc gcaggaacgt
     4561 tatcccgacg ttcagttcca ccagacccgc gagcattaat tcttgcctcc agggcgcggt
     4621 agccgctgcg ccctgtcaat ttcccttcct tattagccgc ttacggaatg ttcttaaaac
     4681 attcactttt gcttatgttt tcgctgatat cacgagcggt ttcaaaattg tgatctatat
     4741 ttaacaaagt aatgacattt ctgacggcgt taaataccgt tcaatgcgta gatatcagta
     4801 tctaaagccg tcgattgtca ttctaccgat attaataact gattcagagg ctgtaatggt
     4861 cgttattcat cacccatcgc ttttgtgatg gcggccattg acttctgtag agggtgaagt
     4921 ctctccctat tcagcaatgc aacctcgtgt tgccaggctc aaattacgag caaacataca
     4981 ggaataaatc gatgactatg acaagactga agatttcgaa aactctgctg gctgtaatgt
     5041 tgacctctgc cgtcgcgacc ggctctgcct acgcggaaaa caacgcacag actaccaatg
     5101 aaagcgcagg gcaaaaagtc gatagctcta tgaataaagt cggtaatttc atggatgaca
     5161 gcgccatcac cgcgaaagtg aaggcggcgc tggtggatca tgacaacatc aagagcaccg
     5221 atatctctgt caaaaccgag caaaaagtcg tgaccctgag cggtttcgtt gaaagctagg
     5281 ctcaggccga agaggcagtg aaagtggcga aaggcgttga aggggtgacc tctgtcagcg
     5341 acaaactgca cgttcgcgac gctaaagaag gctcggtgaa gggctacgcg ggtgacaccg
     5401 ccaccaccag tgaaatcaaa gccaaactgc tggcggacga tatcgtccct tcccgtcatg
     5461 tgaaagttga aaccaccgac ggcgtggttc agctctccgg taccgtagat tctcaggcac
     5521 aaagtgaccg tgctgaaagt atcgccaaag cggtagatgg tgtgaaaagc gttaaaaatg
     5581 atctgaaaac taagtaattc gtcgtaattc gtcctcccga actttgtcgg gaggcgcgat
     5641 gtgcaccaca ctaaaaatat cgcattgagt gattttcacg ctcatatcaa gcggtgacat
     5701 taactatggt aaaggagacg cttatgtttc gttggggcat catatttctg gttatcgcgt
     5761 taatcgccgc cgcacttggg tttggtggtt tggccggtac cgctgcaggc gcagctaaaa
     5821 ttgtctttgt cgtcgggatt attctgttcc tggtgagttt gttcatgggc cgaaaacgac
     5881 cctagatttc agaccattaa gaaaatttta tccaaagcca gtccagcgga ctggcttttg
     5941 cggttttagc gaataataaa ttgcgttact ttgtcattct ttcacaacaa aaacaggaag
     6001 gcagaggtgg ggcagcgaat acctgtaacg cttggtaata ttgcgccgtt gtcgctaagg
     6061 ccgttccagc ctggacgaat agctctggtg tgcgaaggcg gcggacagcg tggaattttc
     6121 acggctggcg tgctggatga gtttatgcgc gcgcagttta atcctttcga tctttatctc
     6181 ggcacatctg ccggggcgca gaacctctcg gcgtttatct gcaatcagcc cggttacgcg
     6241 cgtaaagtca tcatgcgcta taccacaaaa cgcgaatttt tcgatccatt gcgctttgtc
     6301 cgtggaggaa atcttatcga tctcgactgg ctggtggagg ccaccgcaag ccagatgccg
     6361 ttgcaaatgg ataccgccgc gcggttgttt gacagcggca aatcgtttta tatgtgcgcc
     6421 tgtcgtcagg atgactacgc gcctaattac tttttaccaa ccaaacaaaa ctggctggat
     6481 gtgattcgcg cctccagtgc gatacctggc ttttatcgta gcggagtgtc gctggaaggc
     6541 attaactacc tggatggcgg gatcagtgat gcgattccgg ttaaagaggc ggcaaggcag
     6601 ggcgctaaaa cgttggtcgt cattcgcact gtgccgtcac aaatgtacta cacgccgcag
     6661 tggttcaaac gcatggaacg ctggctgggt gacagtagcc tgcagccgct ggtcaatctg
     6721 gtgcagcatc atgaaaccag ctatcgtgac attcagcaat ttattgagaa accaccgggc
     6781 aagctgcgga tattcgaaat ttatccgccg aagccattac atagtatcgc gcttggcagt
     6841 cggattccgg cgctgcgtga agactataaa cttgggcgtt tatgcggttg ttatttcctc
     6901 gccacggttg gcaagctatt aactgaaaaa gcgccgctta cccgccatct ggtgccagtg
     6961 gtgacgccgg aatcgatcgt tattccgcct gcgccagtcg ccaacgatac gctggttgcc
     7021 gaagtgattg acgctccgca ggcgaacgac ccgacattta acaatgagga tctggcttga
     7081 tttgccgttt tatcgacacc cactgccatt ttgatttcct gccgtttagt ggcgatgaag
     7141 aggccagcct gcaacgcgcg gcacaagcgg gcgtaggcaa gatcattgtt ccggcgacag
     7201 aggcggaaaa ttttgcccgt gtgcaggcgt tagcggaaaa atatcaaccg ctgtatgccg
     7261 cattgggctt gcatccaggt atgttggaaa aacatagcga tgtgtctctt gagcagctac
     7321 agcaggcgct ggaaaggcgt ccggcgaagg tggtggcagt gggggaggtc ggtctggatc
     7381 tcttcggcga cgatccgcaa cttgagaggc agcagtggtt actcgacgaa cagctgaaac
     7441 tggcgaaacg ctacgatctg ccggtgatcc tgcattcacg gcgcacacac gacaaactgg
     7501 cgatgcatct taaacgccac gatttatcgc gcactggcgt ggttcacggt ttttccggca
     7561 gcctgcaaca ggccgagcgg tttgtacagc tgggctacaa aatcggcgta ggcggtacta
     7621 tcacctatcc acgcgccagt aaaacccgcg atgtcatcgc aaaattaccg ctggcatcgt
     7681 tgttgctgga aaccgacgcg ccggatatgc cgctcaacgg ctttcagggg cagcctaacc
     7741 gaccggaaca ggctgtgcgg gtgtttgacg tgctttgcga gttgcgcccg gaaccagaag
     7801 atgagattgc cgaagtgttg cttaataata cgtatgcgtt gtttagcgtt agtgggtagt
     7861 ttacccttcg taggcagtat ccggcagtcg gcgcataatg cctgatgcga cgcttgtcgc
     7921 gtcttatcat gcctacaggt ttgtgccgaa ccgtaggccg gataaggcgt tcacgccgca
     7981 tccggcagtt ggcgcacaat gcctgatgcg acgcttgtcg cgtcttatca tgcctacaag
     8041 tctgtgccga accgtaggcc gtatccggca tgtcacaaat agagcgccgg aaatatcaac
     8101 cggctcaccc cgcgcacctt taacgcatca gccaacggct caacgtcttc cggcgtggcg
     8161 ctcgcccagc tttgcgcctc gccatacacg ccgtgggcat gaaacgcatt caggcgaacc
     8221 ggaacatcgc caagtctctt gataaacgtc gccagctcat cgatgtgatg caaataatcc
     8281 acctggtctg gaattaccag caaacgcagt tccgccagct tgccgcgctc tgcaagcaaa
     8341 cagatgctgc gcttaatctg ctgattatcg cgtccggtta agtgttgatg acattcgctc
     8401 ccccacgctt tgagatcgag cattgcgccg tcacacaccg ggagtaattt ttcccagccg
     8461 gtttcgctca acatgccgtt actgtccacc aggcaggtga ggtggcgcag ttgcggatcg
     8521 tttttgatag cagtaaacag cgccactaca aacggcagtt gggtcgtggc ttcgccgccg
     8581 cttaccgtta tcccttcaat aaacagcacc gctttgcgga catggctaag cacttcgtcc
     8641 acgctcatgg attgcgccat tggcgtggca tgttgcggac acatcttcag gcaggtatca
     8701 cactgctcgc agaccacagc gttccacagc actttgccgt caacaatctg caacgcctga
     8761 tgcggacact gtggcacgca ctctccgcaa tcattgcagc gtcccatcgt ccacggattg
     8821 tgacagtttt tgcagcgcag attgcagccc tgcagaaaca gagccagacg actgcctggc
     8881 ccgtcaacgc aggagaaggg gataatctta ctgactaaag cgcatctgct gttcatggct
     8941 tatcacgcgc ggctggcgtt ccagaatacg agtgttgcgt gtggcttctt cgcccagcca
     9001 ggtggtgttg gtgcgtgaac cttcggcgcg atatttttct aaatccgaca aacgcaccat
     9061 ataaccggta acgcgaacca gatcgttacc gctgacattg gcggtaaatt cacgcattcc
     9121 ggctttaaag gcaccgaggc aaagctgtac cagcgcctgc ggattacgtt tgatggtttc
     9181 gtcgagcgtc agaatgtcgc tgatgccgga ataataataa gcatgatgcg gggcgacagt
     9241 ttgcagatgg atgatcggat ctggctcatc gccatacggc aaacgcgcgc ccggcgtggt
     9301 gccgatatcg gaactgatcc ccgactgtgc gtgtaacatg gcgcgttttt gccagccata
     9361 tttcacgggg gtattggcga caaactccgc cagttgcgcg ctgatgcgat aacccacttc
     9421 atttgcggcg gcttctttac cgtagcgcgc ggcaatccct tctttctcac acagcaagtt
     9481 aaccgcttcc gccagcccat acatgccaaa cattggcaca aaacgttcag ggttaatcag
     9541 cccttctttc accaggaagc tattctcaaa gaagtgtgat tgttgataga ggaattcaca
     9601 ccgcgcatcg atgatggcga tctgctgctg gcagtagtgc ggtagagtgc gcgtaaagaa
     9661 gtcatccagc gattcgctgc gctcggcaat ggctttcagg ttaaggcgta ccagcgtgct
     9721 gccaccaccc gccagcggca gtgagttgta acagctcaca atcccgtagc ccccttttgt
     9781 gaaaatttta tcatgcaccg gaccgttggc gatgtgcggt ttgctacatt cacagatgtt
     9841 cttcgccact tccagcagca ggtcatcagg ggggatttca ggatcgtaga taaaggtcag
     9901 gttcggtgaa acctgcttca actctgcgtc tgcacgtaag atcgcgcggg taatgggcga
     9961 atcagacggg ccgatattgg cgtgcataaa ggcgtctggc agggttccgt cgaggtaacg
    10021 ccagaaacgt tttattcgaa catcgatctc gtcttgtgtt agaattctaa catacggttg
    10081 caacaacgca tccagttgcc ctaggtagac cggcatcgat gtgaccgacg gtacgtggtg
    10141 gtaaagaatg gtcagcagag agagtgcgtc atcaagatct ttcgcgcctt ccagctccag
    10201 ccatt
//
LOCUS       DADMJE010000151        10180 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.154, whole genome shotgun sequence.
ACCESSION   DADMJE010000151 DADMJE010000000
VERSION     DADMJE010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10180)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10180)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10180
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.154"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(497..859)
                     /locus_tag="JN001_003345"
     CDS             complement(497..859)
                     /locus_tag="JN001_003345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YibL family ribosome-associated protein"
                     /protein_id="HAY9054469.1"
                     /translation="MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKAT
                     LEAEIARLREVHSQKLSKEAQKLMKMPFQRAITKKEQADMGKLKKSVRGLVVVHPMTA
                     LGREMGLQEMTGFSKTAF"
     gene            1144..1353
                     /locus_tag="JN001_003346"
     CDS             1144..1353
                     /locus_tag="JN001_003346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054470.1"
                     /translation="MGKLGENVPLLIDKAVDFMASSQAFREYLKKLPPRNAIPSGIPD
                     ESVPLYLQRLEYYRRLYRPKQVEGQ"
     gene            complement(1365..1952)
                     /gene="mtlR"
                     /locus_tag="JN001_003347"
     CDS             complement(1365..1952)
                     /gene="mtlR"
                     /locus_tag="JN001_003347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor MtlR"
                     /protein_id="HAY9054471.1"
                     /translation="MVDQAQDTLRPNNRLSDMQATMEQTQAFENRVLERLNAGKTVRS
                     FLITAVELLTEAVNLLVLQVFRKDDYAVKYAVEPLLDGDGPLGDLSVRLKLIYGLGVI
                     NRQEYEDAELLMALREELNHDGNEYAFTDDEILGPFGELHCVAALPPPPQFEPADSSL
                     YAMQIQRYQQAVRSTMVLSLTELISKISLKKAFQK"
     gene            complement(1952..3100)
                     /gene="mtlD"
                     /locus_tag="JN001_003348"
     CDS             complement(1952..3100)
                     /gene="mtlD"
                     /locus_tag="JN001_003348"
                     /EC_number="1.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709374.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HAY9054472.1"
                     /translation="MKALHFGAGNIGRGFIGKLLADAGIQLTFADVNQVVLDALNARH
                     SYQVHVVGETEQVDTVSGVNAVSSIGDDVVDLIAQVDLVTTAVGPVVLERIAPAIAKG
                     LVKRKEQGNESPLNIIACENMVRGTTQLKGHVMNALPEDAKAWVEEHVGFVDSAVDRI
                     VPPSASATNDPLEVTVETFSEWIVDKTQFKGALPNIPSMELTDNLMAFVERKLFTLNT
                     GHAITAYLGKLAGHQTIRDAILDEKIRAVVKGAMEESGAVLIKRYGFDADKHAAYIQK
                     ILGRFENPYLKDDVERVGRQPLRKLSAGDRLIKPLLGTLEYSLPHKNLIQGIAGAMHF
                     RSEDDPQAQELAALIADKGPQAALAQISGLDANSEVVSEAVTAYKAMQ"
     gene            complement(3330..5243)
                     /locus_tag="JN001_003349"
     CDS             complement(3330..5243)
                     /locus_tag="JN001_003349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICBA"
                     /protein_id="HAY9054473.1"
                     /translation="MSSDIKIKVQSFGRFLSNMVMPNIGAFIAWGIITALFIPTGWLT
                     NETLAKLVGPMITYLLPLLIGYTGGKLVGGERGGVVGAITTMGVIVGADMPMFLGSMI
                     AGPLGGWCIKHFDRWVDGKIKSGFEMLVNNFSAGIIGMILAILAFLGIGPIVEALSKM
                     LAAGVNFMVVHDMLPLASIFVEPAKILFLNNAINHGIFSPLGIQQSHELGKSIFFLIE
                     ANPGPGMGVLLAYMFFGRGSAKQSAGGAAIIHFLGGIHEIYFPYVLMNPRLILAVILG
                     GMTGVFTLTILGGGLVSPASPGSILAVLAMTPKGAYFANIAGVCAAMAVSFVVSAILL
                     KTSKVKEEDDIEAATRRMQDMKAESKGTSPLSAGDVTNDLSHVRKIIVACDAGMGSSA
                     MGAGVLRKKIQDAGLSQISVTNSAINNLPPDVDLVITHRDLTERAMRQVPQAQHISLT
                     NFLDSGLYTSLTERLVAAQRHTENEVKVKDSLKDSFDDSSANLFKLGAENIFLGRKAA
                     TKEEAIRFAGEQLVKGGYVEPEYVQAMLDREKLTPTYLGESIAVPHGTVEAKDRVLKT
                     GVVFCQYPEGVRFGEEEDDIARLVIGIAARNNEHIQVITSLTNALDDESVIERLAHTT
                     SVDEVLELLAGRK"
     gene            5780..6142
                     /locus_tag="JN001_003350"
     CDS             5780..6142
                     /locus_tag="JN001_003350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3302 domain-containing protein"
                     /protein_id="HAY9054474.1"
                     /translation="MFLNYFALGVLIFVFLVIFYGIIAIHDIPYLIAKKRNHPHADAI
                     HTAGWVSLFTLHVIWPFLWIWATLYQPERGWGMQSHVASQEKATDPEIASLSDRISRL
                     EHQLAAEKKTDYSTFPEI"
     gene            6145..7281
                     /locus_tag="JN001_003351"
     CDS             6145..7281
                     /locus_tag="JN001_003351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HAY9054475.1"
                     /translation="MDLLIVLTYVALAWAVFKIFRIPVNQWTLATAALGGVFLVSGLI
                     LLMNYNHPYTFTAQKAVIAIPITPQVTGIVTEVTDKNNQLIQKGEVLFKLDPVRYQAR
                     VDRLQADLMTATHNIKTLRAQLTEAQANTTQVSAERDRLFKNYQRYLKGSQAAVNPFS
                     ERDIDDARQNFLAQDALVKGSVAEQAQIQSQLDSMVNGEQSQIVSLRAQLTEAKYNLE
                     QTVIRAPSNGYVTQVLIRPGTYAAALPLRPVMVFIPEQKRQIVAQFRQNSLLRLKPGD
                     DAEVVFNALPGQVFHGKLTSILPVVPGGSYQAQGGLQSLTVVPGTDGVQGTIELDPND
                     DIDALPDGIYAQVAVYSDHFSHVSVMRKVLLRMTSWMHYLYLDH"
     gene            complement(7741..8178)
                     /locus_tag="JN001_003352"
     CDS             complement(7741..8178)
                     /locus_tag="JN001_003352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000763815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054476.1"
                     /translation="MADKAILWALISASTKEERKACSLSYFACKAAEAELGLAYMAAN
                     DNKEFLTSLSNIMRYKIDAGLSESYTCYLLSKGKIIRPYLKNLNPLQLAADCIETVNK
                     IKDKNKKIIDINSVNICSDDKNIKLRVNSTIMAIDDSIKCIDE"
     gene            complement(8886..9347)
                     /locus_tag="JN001_003353"
     CDS             complement(8886..9347)
                     /locus_tag="JN001_003353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sel1 repeat family protein"
                     /protein_id="HAY9054477.1"
                     /translation="MKACLLLFFYFSLIDQLHGADVKIKENESVMGSTAMTYDLSEEK
                     LMKLKYKSQHGDSEASFRLYQYYCFTKNNIDKQLRFLERSASQGNVTAQFNYGVFLSD
                     TNPTLSEYYNLNRAIYWMEFAVNNGNIDAKSKLQELKKLKRMDRRKNKENP"
     gene            complement(9359..10156)
                     /locus_tag="JN001_003354"
     CDS             complement(9359..10156)
                     /locus_tag="JN001_003354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001582091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY9054478.1"
                     /translation="MYHCDHRGLPLALISTEGATAWCAEYDEWSNLLSDENPHHLQQL
                     IRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNPVINVDPQG
                     LVDINLYPESDLIHSVADEINIPGVFTIGGHGTPTSIESATRSIMTAKDLAYLIKFDG
                     NYKDGMTVWLFSCNTSKGQNSFASQLAKELHTNVIGPDTLWTWWGRGTNGKLKMDTVL
                     TAPTNLNSNKDLMAITTKDLGNWITYGPSGHPISNMQGTPEKPSDIR"
BASE COUNT         2608 a         2410 c         2318 g         2844 t
ORIGIN      
        1 tgtccattgt attattggtg atttatgttg ctttacatta atgacagtga tgtgtgtcga
       61 ttaaatattg ttttaagcat tcatcataaa aatgtatcat tcgtttcaaa agatgtctgt
      121 gtttgtatga atatattatt ttcgtggatt ctaatgatga ttattaataa atgtcaaata
      181 tgaaagaaac catgtctggg aaaaaattta cagataattt attgtatgaa tatgatgatt
      241 aaaatttcac aattaaatcc gaaaaaaaga gacgtaactg cttgttaatt aataaatgat
      301 atcttctata tatttttatt gtttataggt ggctatttcg gtaaaaatgc attttcagaa
      361 tatcaaccag cggtaaatcg acgtaaaggg agtgaattgt ttggtaatta ggcgagtaga
      421 caggagagtc cccgcattga ccagctaagg caagccagat gcgggttgat atgatcgaac
      481 cagtcgtctg aggcgcttaa aacgcagtct tagagaatcc agtcatctcc tgcaggccca
      541 tttcacggcc cagcgcggtc attgggtgca caaccaccag tccgcgaaca cttttcttca
      601 gcttgcccat atcagcctgc tcttttttgg taattgcgcg ctgaaacggc atcttcatca
      661 gcttctgtgc ttctttactc agtttttggc tatgaacctc acgcaggcga gcaatttctg
      721 cttccagcgt ggctttctct ttttccagct cggcatattt gtctgcggct tcaaccagcg
      781 acagatcggc ctgctggtgg cggatggcgt ccaggcgatc gctgagacgt ttgatttcgt
      841 ttttttcgac ttctttcatg tgatggcttc tgataaagat aaatttatag cccctagtat
      901 gcgcgaccag gtgctttgtt cacaactgat gacattgtaa tagttctgca acgtaatcat
      961 taacatgctc aaaaactacg caattcgttg attaattaag aaatctatag aaaaaagata
     1021 ataaacagca gcggatgatt attgaggatt cagcacgttt tccttaatgt catctttacc
     1081 gggaacctaa actaaaattg gtggccgcgc attcccggcg cggggtaata cggagatatc
     1141 atcatgggca aattaggtga aaacgttccg cttcttatcg ataaagccgt agatttcatg
     1201 gcatcaagcc aggcgttccg ggagtatctg aaaaaacttc ctccccgtaa cgcgattccg
     1261 tccggaatac ccgatgaaag cgtgccgtta tatctacaac gtctggagta ttatcgtcgg
     1321 ctttatcggc cgaagcaggt agaggggcag taagcagacg ttgcttactt ttgaaaggct
     1381 ttttttaagc tgattttgga aatcagctca gtcagtgaaa ggaccattgt tgatcgcaca
     1441 gcctgttgat agcgctgaat ttgcattgca tacaaactgg agtctgctgg ttcaaactgt
     1501 ggcggcggtg gtaacgccgc cacgcagtgc agttcaccaa agggtccaag gatttcgtcg
     1561 tcggtaaagg cgtactcgtt gccgtcgtga tttagctctt cacgcaatgc catcagcagt
     1621 tccgcatctt cgtattcctg gcggttaatg acgcccaacc cgtaaatgag ttttaaacgc
     1681 acagaaagat cgcccagcgg accgtcgccg tcgagtaacg gttctacagc atacttcacc
     1741 gcgtaatcgt ctttgcggaa tacctgaagc accagaagat ttaccgcctc ggtcaaaagc
     1801 tcgacggcgg tgatcagaaa gcttcgcacg gttttgccag cattcagacg ctcaagcaca
     1861 cggttttcaa aggcctgggt ttgttccatt gttgcctgca tatctgacaa tctgttattc
     1921 gggcgcaggg tgtcctgcgc ctggtccacc attattgcat tgctttataa gcggttaccg
     1981 cctcggatac aacctcactg ttggcatcaa gaccggaaat ctgtgccagc gccgcctgcg
     2041 gacctttgtc agcgatcagt gctgccagtt cctgagcctg cggatcatct tcactgcgga
     2101 agtgcattgc accagcaatc ccctgaatca gattcttgtg cggaaggctg tattccagcg
     2161 taccgagcag tggcttgatc agacggtcgc cagcactcag tttacgcagc ggctgacggc
     2221 ctacgcgctc tacatcatct ttcagatacg ggttctcaaa acgaccgagg attttctgga
     2281 tgtacgccgc atgtttgtct gcgtcaaagc cgtagcgctt gatcagtacc gcaccacttt
     2341 cttccatcgc accttttacc accgcgcgga ttttctcgtc gagaatagcg tcacgaatgg
     2401 tctgatgacc ggccagtttt ccgaggtacg cggttatagc atgacccgtg ttcagggtga
     2461 agagtttacg ttcgacaaat gccatcaggt tgtcggttaa ctccatgctt gggatgttcg
     2521 gcagtgcgcc tttgaactgc gttttatcga caatccattc gctgaaagtt tctaccgtca
     2581 cttccagcgg atcgttagtt gccgaagccg aaggcggtac gatgcggtca acggcggaat
     2641 cgacaaagcc aacgtgttct tctacccacg ctttggcgtc ttccggcagg gcgttcatca
     2701 catggccttt cagctgcgtg gtaccgcgta ccatgttttc acaggcgatg atgttcagcg
     2761 gggattcatt accttgttct ttgcgtttca ccagcccttt ggcgatagcc ggagcaatac
     2821 gttccagcac aaccgggcca acggcggtag tgactaaatc gacctgagca atcagatcaa
     2881 cgacatcatc accaatgctg ctgacagcat tgacgccgga aacggtatct acctgctcgg
     2941 tttcaccaac cacatgaacc tgatagctat gacgggcatt cagggcatca agtaccacct
     3001 gattgacatc ggcaaacgtc agttggatac ccgcgtctgc cagcagttta ccgataaagc
     3061 cacgaccgat attacctgcg ccaaaatgta atgctttcat agtattaacc ttcatcaatg
     3121 tttttacccg agagggctgg ggtgaggctt ttccctcacc caaaccctct ccgtgaggag
     3181 aggggcagcg ccggatgcgg cgtaagcgcc ttatccggcc tacaagaacg tgcaaattca
     3241 acaaatcgtg atgcatcctg taggcctgat aagcgtagcg catcaggcaa ttaaccccac
     3301 cttctccatg tggagagggt gggattggat tacttacgac ctgccaacag ttccagcact
     3361 tcatccacgc tggtggtgtg tgccagacgc tcgatgacgg actcatcatc cagtgcattg
     3421 gtcaggctgg tgataacctg aatgtgctcg ttgttacggg ctgcaatacc aatcaccaga
     3481 cgggcaatgt catcttcctc ttcaccgaag cgcacgcctt ccgggtactg gcagaacacc
     3541 acgcccgttt tcagtacgcg atctttcgct tcaaccgtac cgtgtggcac cgcgatagac
     3601 tcacccagat aagtcggggt cagtttttca cgatccagca tcgcctgaac gtattccggc
     3661 tcaacgtaac cgcctttcac cagctgctcg ccagcaaaac gaatcgcttc ttctttggtt
     3721 gctgctttgc gaccgaggaa gatgttctcc gcgcccagtt tgaacaggtt agcactggaa
     3781 tcgtcaaagc tgtctttcag actgtctttc actttcactt cgttttcagt atggcgctgg
     3841 gcagcaacca gacgttcggt taggctggtg tacaggccgc tgtcgaggaa gttggtcagc
     3901 gaaatatgct gtgcctgcgg aacctggcgc atagcgcgtt cggtcaggtc acggtgagtg
     3961 atgacgaggt ccacatctgg cggcaggttg ttgatcgcgc tgttagtgac cgaaatctgc
     4021 gacagacctg catcctgaat tttcttacgc agcacgcctg cgcccatcgc acttgaaccc
     4081 ataccggcat cacaggcaac gatgatttta cgtacgtggc tcaggtcgtt agtcacatcg
     4141 cccgcagaca gcggagatgt gcctttagac tcagctttca tgtcctgcat acgacgagtt
     4201 gctgcttcaa tatcatcttc ttctttcact ttgctggttt tcagcaaaat agcagagaca
     4261 acgaaggaga cagccatcgc cgcacacaca cccgcgatgt tagcgaaata agcccctttt
     4321 ggtgtcatcg ccagtacagc aaggatagaa cccggagatg ccggagaaac cagaccaccg
     4381 cccaggatag tcagcgtgaa cacgccagtc ataccgccga ggatgactgc gaggatcaga
     4441 cgcggattca tcagcacata cgggaagtag atttcgtgga taccacccag gaagtggatg
     4501 attgccgcac cgcccgcaga ctgtttagcg ctaccacgac caaagaacat gtacgccagc
     4561 agcacgccca tacctggacc tgggttagct tcaatcagga agaagattga tttacccagt
     4621 tcatgggact gctgaatacc cagcggcgag aagataccgt ggttaatggc gttgttgagg
     4681 aacaggattt tcgccggttc aacaaagata gacgccagcg gcagcatgtc atggacaacc
     4741 atgaagttaa cgcccgcagc cagcattttg gacagggctt caacaatcgg gccaatgccg
     4801 aggaatgcca gaatagcgag gatcatcccg atgatgcctg cggagaagtt attcaccagc
     4861 atctcaaaac cggatttgat cttaccgtct acccagcggt cgaagtgctt aatgcaccag
     4921 ccgcccagcg gacctgcaat catagaaccg aggaacatcg gcatgtctgc gccgacgata
     4981 acgcccatgg tggtgatggc accgactacg ccgccacgtt cgccgcctac cagcttacca
     5041 ccggtataac cgatcagcag cggcaggaga taagtgatca tcggcccgac cagcttcgcc
     5101 agcgtctcgt tcgttaacca ccctgttgga ataaataacg cggtgatgat accccacgcg
     5161 ataaacgcgc cgatatttgg catcaccatg ttgctgagga aacgaccaaa gctttgcact
     5221 ttgatcttaa tatcggatga cataaaaaca ccccttctta tgtttgctgt cgcgcaggct
     5281 ggaagcccga ggttttttgt taatgtggcg gcagaggtag ccggaccttg tagatactgc
     5341 gaaatctggc actgaatcgg ttaactgtcc agtcgacggc cttttgtgtg atattaatca
     5401 cataaatata ggaggtagag aggtaattga cgtgacgttc atcacaaaac gcttgtgtaa
     5461 aaaagcaaca aggcggcgat tttcgctaaa aatggcattt aaatgtgagt agtatcacat
     5521 ttttgttttg atggtttgtt gaatctttgt gatctgaatc acaagatatt ttcttacggc
     5581 gttcacctga tgtgatctac agcatgttat gccttcgtca tacaatcgtt atgtaactaa
     5641 gcaactcatc acctctaaaa attattcttt ggtgttatgg cgagaatcgc gaacccggat
     5701 tattgtcaaa atatcagcct gactcccttc tggctgccag cccaaaaaca acactgataa
     5761 acgtgaatcc gaggcagata tgtttctaaa ctatttcgcg ttgggagtgc tgatcttcgt
     5821 ctttctggtg attttttatg gaatcatcgc gatacatgac atcccttatc tgattgccaa
     5881 aaagcgcaat cacccccatg ccgacgctat tcatacggcg ggctgggtga gcctgtttac
     5941 tctgcatgtt atctggccgt ttctgtggat ctgggcgacg ctctatcaac cggagcgtgg
     6001 ctggggtatg cagtcacatg ttgcgtcgca ggagaaagcg actgacccgg aaatcgcctc
     6061 actttctgac cgaatttccc ggctggagca tcaactcgcc gccgagaaaa agactgacta
     6121 ttccacgttc ccggagatct aattatggat ctattgattg ttttaactta cgtggcgctg
     6181 gcgtgggcgg tctttaaaat cttccgcatt ccggtaaatc agtggacgct ggcgacggcg
     6241 gcgctgggag gcgtgtttct ggtgagtggt ttgattttgt tgatgaacta caaccaccct
     6301 tacactttta ccgcgcaaaa ggcagtgata gcgatcccta tcacgccaca ggtgacggga
     6361 attgttactg aagtcactga caagaataat cagcttattc aaaagggcga ggtgcttttt
     6421 aagctcgacc cggttcgtta ccaggcgcga gttgacagac ttcaggctga cctgatgacg
     6481 gcgacgcata atataaagac gctgcgtgcg cagctcactg aagcgcaggc caacaccacc
     6541 caggtttcag cggagcgcga ccgtctgttt aaaaattatc aacgttactt gaaaggcagc
     6601 caggcggcgg tgaatccgtt ctcggaacgt gacatcgacg atgcgcggca aaatttcctc
     6661 gcgcaggatg cgctggtgaa aggctcggtg gcggagcagg cgcagatcca gagccagctc
     6721 gacagtatgg ttaacggcga gcaatcgcag attgtgagct taagagcgca acttactgaa
     6781 gcaaaatata accttgagca gactgtcatt cgcgcgccga gcaatggcta cgttactcag
     6841 gtactgatcc gcccaggtac atacgcagct gccttgccgc tgcgtccggt gatggtcttc
     6901 atccccgagc aaaaacggca aattgtcgcc caatttcggc aaaactcgct gttacgtctg
     6961 aaacccggcg atgatgcgga agtggtgttt aacgcgctac ctgggcaggt gtttcacggc
     7021 aaactgacta gtattttacc tgtcgtgcca ggcggttctt atcaggcgca ggggggattg
     7081 caatcattaa cggtcgtgcc cggcacggac ggtgtgcagg gaaccattga actggaccct
     7141 aacgatgata tcgatgcctt acccgacggc atctacgccc aggtggcggt ttactccgac
     7201 catttcagcc atgtttcggt gatgcggaaa gtgctgctaa gaatgaccag ctggatgcat
     7261 tatctttatt tggatcattg agggggaggg gggagattat ggaactttgc tccttgtaag
     7321 gactaattat ttttgcatat tacttcatta gctgcgatga tttttcttta atattcatta
     7381 tgttaataag ttctggatga gtgtgctctc attggatttt ttatccgtct tgttctgccg
     7441 caggatgaga ctatacatcg tcgagatcgc aatgatgata tgagttgttc ctcctgcgac
     7501 ggctctaatc aaaaaagagc aggagtgctt ttccatctat tgcgatgatg gctttattat
     7561 ctgaaggatg acagtcacat ttaaaaaata tttaatctat agatcacaat gtagggtcat
     7621 ggaatatatg tatacaacta ttttcttctt cacttttaat tatcgtattc attataaaac
     7681 taagttaaaa aaactcctgg agagtgagtt attaatatat ttttaaataa aattaagtta
     7741 tcattcatcg atgcatttta tagaatcatc aatggccata atagtactat taactctcaa
     7801 ttttatattt ttatcatcac tacaaatatt aactgaattt atatcaatga tttttttatt
     7861 cttatctttt attttattta ctgtttcaat gcaatcagcg gcaagttgga gtggatttag
     7921 atttttcaga tatggtctta tgatctttcc cttacttaat aaatagcatg tataggattc
     7981 ggaaagtcca gcatctattt tgtacctcat tatattagat aaggatgtga gaaattcctt
     8041 gttatcattc gcagccatat atgccagtcc gagttcagcc tctgcggcct tacaggcaaa
     8101 atagcttagt gaacacgctt ttcgttcctc tttagtactg gctgatatta gtgcccataa
     8161 tattgctttg tctgccaaat ctaactctct ctgaaattgt cttgcagtaa ctgcactcgc
     8221 agaaatagag aaaaaaatac aattgttaat aaccttgcca tattttttta gtccgtaact
     8281 gttaatgtgc tatctggctc tgaaaatatt aactcattta atttttgcat gtcattagat
     8341 aaaccagtta tacaaccctc ggaacagaat cgaggtccta aagacggacc aaaagcgttt
     8401 aaacaactat gtattgaaaa tccattgcga ttataagttc ctgtattaac tgacggtact
     8461 aatcgtatgc cgtcaggttt tctattgctt gctcccgggt cattaacatt ccaactccat
     8521 aggccttgag gtattggcca tctatttata aatgtgtaca acggggatta tttttacatt
     8581 gcatattatt accagaagcg actggaatac taagcacatc ataaaaatta tcatcacatg
     8641 gtatatctga aacacacgaa agcataccta aagttatgct gtataaacag gtggctaatc
     8701 ccaaggggat cgattccaga aatcgggttc aacggatact gataaaaatt ccacctacct
     8761 tccagcccaa tcggagcctg agtgttatac cgcccctgct gcggttaatg ttaccgataa
     8821 tagttatagt acagccctga ttcatcatca tactactgct gcggcagtct gatgaactat
     8881 tgcttttacg gattctcctt attcttcctt ctatccattc gctttagctt tttgagctct
     8941 tgaagtttgc tctttgcatc aatattaccg ttatttacag cgaattccat ccaataaata
     9001 gctctattca aattataata ttctgataat gttggatttg tatctgataa aaagacccca
     9061 taattaaact gcgctgtaac attcccctga gatgctgatc tttccaagaa tcgcaattgt
     9121 ttatcaatat tatttttagt aaagcagtaa tattgatata gtcgaaatga tgcctctgaa
     9181 tcaccatgtt gtgatttata cttcagtttc atcagctttt cttcacttaa atcataggtc
     9241 attgctgtag atcccatcac actttcgttt tcttttattt tcacatcagc accatgcaat
     9301 tgatcaataa gagaaaaata aaaaaatagt aacaagcatg ctttcataca tctacaacct
     9361 atcttatatc actgggtttt tctggcgtac cttgcatatt agaaatgggg tgcccagatg
     9421 gcccatatgt tatccaatta ccaaggtctt ttgttgttat agccattaga tccttatttg
     9481 aattaaggtt cgttggtgct gttagcactg tatccatttt taacttacca ttagttcctc
     9541 gcccccacca cgtccatagc gtgtcaggtc ctattacatt tgtatgtaac tctttagcta
     9601 attggctagc aaatgaattt tgtcctttac ttgtattaca agaaaataac caaactgtca
     9661 tcccatcttt ataattccca tcaaatttaa ttagatatgc tagatcttta gctgtcatga
     9721 tactgcgcgt tgcggattca atagatgtgg gggtaccatg ccccccgatt gtgaaaacgc
     9781 ctgggatatt aatctcatca gctacagaat ggataagatc actttcgggg tataaattta
     9841 tatcaaccaa accttgcgga tctacattta tgaccggatt caacggatac tgataaaaat
     9901 tccatccccc cttcagccca atcggatcct gagtgatata ccgcccctgc agcgggtcat
     9961 aatagcggtg gcggttgtaa tacaggccgg actcctcatc atactgctga cccggcaggc
    10021 gaatgagctg ctgcagatga tgcgggttct catcactcag caggttgctc cattcatcat
    10081 attctgcgca ccacgctgtt gccccttccg tgctgatgag cgccagcggc aggccgcgat
    10141 ggtcgcagtg gtacaggtgg atttttcgcg ccggcgtgta
//
LOCUS       DADMJE010000152        10156 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.155, whole genome shotgun sequence.
ACCESSION   DADMJE010000152 DADMJE010000000
VERSION     DADMJE010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10156)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10156)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10156
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.155"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..236
                     /locus_tag="JN001_003355"
     CDS             <1..236
                     /locus_tag="JN001_003355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415244.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9054479.1"
                     /translation="TLVEEDKALLIGNGLKLRLLDENASPYTFNKYAEYADFTSDMLV
                     YEKTYTAELSSIAGTPIEAGPFDTVVLFKINYN"
     gene            343..1434
                     /locus_tag="JN001_003356"
     CDS             343..1434
                     /locus_tag="JN001_003356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706518.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HAY9054480.1"
                     /translation="MLYRYTKEKIMRERRMPVLQWGMLCVLSLLLSIGFLAVHLPAAL
                     LLGPMIAGIIFSMRGITLQLPRSAFLAAQAILGCMIAQNLTGSILTTLAANWPIVLAI
                     LLVTLLSSAIVGWLLVRYSSLPGNTGAWGSSPGGAAAMVAMAQDYGADIRLVAFMQYL
                     RVLFVAGAAVLVTCMMLGDNAEAVNQQIVWFPPVSINLLLTILLAVVAGTAGCMLRLP
                     SGTMLIPMLAGAVLQSGQLITIELPEWLLAMAYMAIGWRIGLGFDKQILLRALRPLPQ
                     ILLSIFALLAICAGMAWGLTRFMHIDFMTAYLATSPDGLDTVAVIAAGSNADMALIMA
                     MQTLRLFSILLTGPAIARFISTYAPKRSA"
     gene            complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JN001_003357"
     CDS             complement(1431..2222)
                     /gene="nei"
                     /locus_tag="JN001_003357"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease VIII"
                     /protein_id="HAY9054481.1"
                     /translation="MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQH
                     VTHVGTRGKALLTHFSNDLTLYSHNQLYGVWRVVDTGEEPQTTRVLRVKLQTADKTIL
                     LYSASDIEMLRPEQLTTHPFLQRVGPDVLDPNLTPEVVKERLLSPRFRNRQFAGLLLD
                     QAFLAGLGNYLRVEILWQVGLTGNHKAKDLNAAQLDALAHALLEIPRFSYATRGQVDE
                     NKHHGALFRFKVFHRDGELCERCGGIIEKTTLSSRPFYWCPGCQH"
     gene            complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JN001_003358"
     CDS             complement(2258..2992)
                     /gene="pxpA"
                     /locus_tag="JN001_003358"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HAY9054482.1"
                     /translation="MKIDLNADLGEGCASDAELLTLVSSANIACGFHAGDAQTMQACV
                     REAIKNGVAIGAHPSFPDRENFGRSAMQLPPETVYAQTLYQIGALATIARAQGGVMRH
                     VKPHGMLYNQAAKEAQLADAIARAVYACDPALVLVGLAGSELIRAGKQYGLTTREEVF
                     ADRGYQADGSLVPRSQPGALIENEEQALAQTLEMVQHGRVKSITGEWATVTAQTVCLH
                     GDGEHALAFARRLRSTFAEKEIVVAA"
     gene            complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JN001_003359"
     CDS             complement(2982..3914)
                     /gene="pxpC"
                     /locus_tag="JN001_003359"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpC"
                     /protein_id="HAY9054483.1"
                     /translation="MLKIIRAGMYTTVQDGGRHGFRQSGISHCGALDMPALRIANLLV
                     GNDANAPALEITLGQLTVEFETDGWFALTGAGCEARLDDNAVWTGWRLPMKAGQRLTL
                     KRPQHGMRSYLAVAGGIDVPPVMGSCSTDLNVGIGGLEGRLLKDGDRLPIGKSKRDFM
                     EAQGVKQLLWGNRIRALPGPEYHEFDRASQDAFWRSPWQLSPQSNRMGYRLQGQILKR
                     TTDRELLSHGLLPGVVQVPHNGQPIVLMNDAQTTGGYPRIACIIEADMYHLAQIPLGQ
                     PIHFVQCSLEEALKARQDQQRYFEQLAWRLHNEN"
     gene            complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JN001_003360"
     CDS             complement(3908..4564)
                     /gene="pxpB"
                     /locus_tag="JN001_003360"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpB"
                     /protein_id="HAY9054484.1"
                     /translation="MQRARCYLIGETAVVLELEPPVTLASQKRIWRLAQRLVDMPNVV
                     EAIPGMNNITVILRNPESLALDAIELLQRWWEESEALEPESRFIEIPVVYGGAGGPDL
                     AVVAAHCGLSEKQVVELHSSVEYVVWFLGFQPGFPYLGSLPEQLHTPRRAEPRLLVPA
                     GSVGIGGPQTGVYPLATPGGWQLIGHTSLSLFDPARDEPILLRPGDSVRFVPQKEGVC
                     "
     gene            complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JN001_003361"
     CDS             complement(4587..5330)
                     /gene="ybgI"
                     /locus_tag="JN001_003361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000798886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="radiation resistance protein YbgI"
                     /protein_id="HAY9054485.1"
                     /translation="MKNTELEQLINEKLNSAAISDYAPNGLQVEGKETVQKIVTGVTA
                     SQALLDEAVRLGADAVIVHHGYFWKGESPVIRGMKRNRLKTLLANDINLYGWHLPLDA
                     HPELGNNAQLAALLGITVMGEIEPLVPWGELTMPVPGLELASWIEARLGRKPLWCGDT
                     GPEVVQRVAWCTGGGQSFIDSAARFGVDAFITGEVSEQTIHSAREQGLHFYAAGHHAT
                     ERGGIRALSEWLNENTDLDVTFIDIPNPA"
     gene            5601..7082
                     /gene="dtpD"
                     /locus_tag="JN001_003362"
     CDS             5601..7082
                     /gene="dtpD"
                     /locus_tag="JN001_003362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptide permease DtpD"
                     /protein_id="HAY9054486.1"
                     /translation="MNKHASQPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYND
                     THAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSF
                     LYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGSFSLMYAAGNVGSIIAPIACGY
                     AQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTRGVNKKVLRATNFLLPNWGWLLV
                     LLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF
                     SMLFWAFAQQGGSSISLYIDRFVNRDMFGYTVPTAMFQSINAFAVMLCGVFLAWVVKE
                     SVAGNRTVRIWGKFALGLGLMSAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAEL
                     FIDPVAMSQITRIEIPGVTGVLTGIYMLLSGTIANYLAGVIADQTSQASFDASGAINY
                     SINAYIEVFDQITWGALACVGLVLMIWLYQALKFRNRALALES"
     gene            complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JN001_003363"
     CDS             complement(7124..8542)
                     /gene="phrB"
                     /locus_tag="JN001_003363"
                     /EC_number="4.1.99.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001740284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HAY9054487.1"
                     /translation="MTTHLVWFRQDLRLHDNLALAAACSNSSARVLALYIATPRQWAT
                     HNMSPRQAELINAQLNGLQIALAEKGIPLLFREVDDFVASVEIVKQVCAENSVTHLFY
                     NYQYEVNERARDVEVERALRNVVCEGFDDSVILPPGAVMTGNHEMYKVFTPFKNAWLK
                     RLREGMPECVAAPKVRSSGSIEPSPSITLNYPRQSFDTAHFPVEEKAAIAQLRQFCQN
                     GAGEYEQQRDFPAVEGTSRLSASLATGGLSPRQCLHRLLAEQPQALDGGAGSVWLSEL
                     IWREFYRHLMTYYPSLCKHCPFIAWTDRVQWQSNPAHLQAWQEGKTGYPIVDAAMRQL
                     NSTGWMHNRLRMITASFLVKDLLIDWREGERYFMSQLIDGDLAANNGGWQWAASTGTD
                     AAPYFRIFNPTTQGEKFDREGEFIRRWLPELRDVPGKAVHEPWKWAQKAGVMLDYPQP
                     IVDHKEARLRTLAAYEEARKGA"
     gene            complement(8539..9048)
                     /locus_tag="JN001_003364"
     CDS             complement(8539..9048)
                     /locus_tag="JN001_003364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbgA family protein"
                     /protein_id="HAY9054488.1"
                     /translation="MNLQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVF
                     LAHSQPEYRKLGPFVADIHQWQNLDDYYNQYRQRVVVLLSHPANPRDHTNVLMHVQGY
                     FRPHIDSTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPDAWLSGQRYFELWPRV
                     INLRHSGVL"
     gene            complement(9333..9719)
                     /locus_tag="JN001_003365"
     CDS             complement(9333..9719)
                     /locus_tag="JN001_003365"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054489.1"
                     /translation="MWNDIFTKLSIAILLAFSAYVHAETSAPIFFEDVGSIDSWFSIK
                     YQKYENVKDEQYPEILIYYGVKGSGINRVDGWFFSCAKAGRTCSLIFMADFGESRYFK
                     PAKIAMNKNNLIIRTSDVEIAFKITK"
     gene            complement(9692..>10156)
                     /locus_tag="JN001_003366"
     CDS             complement(9692..>10156)
                     /locus_tag="JN001_003366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY9054490.1"
                     /translation="ITDPLGLIDKPAPVFNRDLNSDPYYLAVNNCYSYALNRYGNPGS
                     RIFGGGGLQPGELSGKEFSKLTCGSIFEASKNDGAKDLDNGSCPSGYHKAQLFIRPHN
                     FIGMGGDYHWYRQDANGEWSDKQGVGAIRFRGKDPFPPIDYPEKCGTIFLPN"
BASE COUNT         2371 a         2754 c         2439 g         2592 t
ORIGIN      
        1 aaacgttggt tgaagaagat aaagcattgt tgattggtaa tggtctgaag ctacgtttgc
       61 tggatgaaaa cgcctcgcct tataccttca ataaatatgc tgaatacgcc gatttcacca
      121 gcgacatgtt ggtctacgaa aaaacctata cagctgaact ttcgtccatt gcaggtaccc
      181 ccatcgaggc tgggcccttc gatacagtgg tgctttttaa aattaactat aactgatttg
      241 ccatgatgcc ctttgcagcc ggaaagggca tctctttcag aaaattgctg attttcctct
      301 tttccttgat tactgttatt ttttcctggc ccggctttct ttatgctgta tcgatacacc
      361 aaagagaaaa taatgaggga gcgaaggatg ccagttttgc agtggggaat gttatgtgtg
      421 ctatcacttc tcctttctat tggtttcctc gcggtacatc tcccggcggc gctattactt
      481 gggccgatga tcgccgggat catcttcagt atgcgcggaa ttactctgca acttccccgc
      541 tccgcttttc tcgccgcgca ggccattctt ggctgcatga ttgcgcaaaa cctcactggt
      601 tcgattctca ccacgctggc cgccaactgg ccgatcgtgc ttgctatttt actggtgacg
      661 ctgctttcca gcgccatcgt gggttggtta ttggtgcgct atagctcact gcctggaaat
      721 accggtgcct ggggttcttc tccaggcggc gcagcggcaa tggtcgctat ggcgcaagat
      781 tacggcgcag atattcgcct ggtggcgttt atgcaatatc tgcgagtgct gttcgtcgcg
      841 ggggccgctg ttctggtcac ctgcatgatg ctgggtgata acgctgaagc ggttaaccag
      901 caaatcgtct ggttcccgcc agtgagcatt aatctcctgc ttacgatttt gctcgcagtc
      961 gttgccggta cggcgggatg catgctgcgt cttccttccg gcacgatgct catcccgatg
     1021 ctggcgggcg cagtgctcca gtctggtcag ctcatcacca tcgaactacc ggaatggctg
     1081 ctggcgatgg cgtatatggc aattggctgg cggattggtc ttggtttcga taaacaaatc
     1141 ttactgcggg cactacgccc actaccgcaa atcctgctgt cgatttttgc tctgctggct
     1201 atttgtgcag gtatggcgtg gggactgacc cggtttatgc atattgattt tatgactgcc
     1261 tacctcgcca ccagtcccga cgggcttgat accgtggcgg tcatcgccgc agggagcaat
     1321 gccgatatgg cgcttattat ggcgatgcaa accctgcgcc tgttcagtat tttgctgacg
     1381 gggccagcca ttgcgcggtt tatttcaacc tatgcgccga agcggtcggc ctagtgctgg
     1441 cagcctggac accagtaaaa cgggcgcgag gacaacgtgg ttttctcaat gatgccgcca
     1501 cagcgttcgc acagttcgcc atcacgatga aaaaccttaa agcgaaacag cgccccatga
     1561 tgcttattct catccacctg cccccgcgta gcgtaagaaa accgaggaat ctccagtaac
     1621 gcgtgtgcga gtgcatccag ttgcgccgca ttgagatctt tcgctttatg atttccagtc
     1681 aacccaacct gccagaggat ctccacccgc aaataattgc caagcccagc cagaaacgcc
     1741 tgatcgagca gtaatcctgc aaactgacgg ttacgaaagc gcggtgacaa taaccgttcc
     1801 tttaccacct ccggcgtcag attcggatcc agcacatcgg gaccaacgcg ttgtaaaaac
     1861 ggatgcgtgg tcagttgttc cggcctcaac atctcaatat ccgaggcgct ataaagcaga
     1921 atggttttgt cagccgtttg cagttttacc cgcaatactc gcgtggtctg cggctcttcg
     1981 ccggtatcaa ccacgcgcca gacgccgtaa agctgattat ggctgtagag cgttaagtcg
     2041 ttggaaaaat gagttaacaa cgccttacca cgcgttccca catgggtaac gtgttgaccg
     2101 ataagttgtg attgataagt ttttaactgc gggaaggcaa accagacatc agttagtggt
     2161 ttgcctttga tcgccgcctc caggttatcc gctgcacggc ggatctccgg gccttcaggc
     2221 atggtgatat ccttttttca ttctttatta atcggggtta tgctgcgaca acaatctcct
     2281 tttcggcaaa tgtagagcgt agtcggcggg cgaacgccag tgcgtgctcg ccgtcgccat
     2341 gcaggcagac tgtttgcgcc gtgaccgttg cccattcgcc ggtgatactt ttgactctgc
     2401 cgtgttgcac catctctagc gtttgcgcca gcgcctgttc ttcgttttca atcaacgcgc
     2461 ctggctgact tcgcggcacc agcgagccgt cagcctgata accgcgatcg gcaaacactt
     2521 cctcgcgcgt tgtcaggcca tattgcttgc ctgcacgaat cagctcgctt cctgccagcc
     2581 caacgagaac caatgctgga tcgcaagcgt ataccgctct ggcgatggcg tctgccagtt
     2641 gtgcttcttt cgccgcctgg ttgtacaaca tgccgtgcgg tttgacatga cgcattacgc
     2701 cgccttgcgc acgggcaatc gttgccagcg cgccaatttg atacagcgtc tgggcgtaaa
     2761 cggtttctgg cggcagctgc atggcgctgc gaccaaaatt ttccctgtcg ggaaaactcg
     2821 ggtgagcgcc aatcgcgaca ccatttttta ttgcttcacg cacgcaagcc tgcatggttt
     2881 gggcatcgcc tgcatgaaat ccacaagcaa tattggcaga ggaaaccagc gttaatagct
     2941 ctgcgtcgct ggcgcagcct tcgcccagat cggcgttcag gtcaattttc attgtgtagc
     3001 cgccacgcta attgttcgaa ataacgttgt tgatcttgcc gcgctttcag tgcctcttcc
     3061 agtgaacact ggacaaaatg aatcggctga ccgagcggaa tttgcgccag atggtacata
     3121 tcagcctcaa tgatacaggc aatacgcggg taaccaccgg tggtctgtgc gtcgttcatc
     3181 aacacaatcg gctgcccgtt atgcggcacc tgcaccacac ccggtaacaa accgtgagat
     3241 aacagttcgc gatcggtggt gcgttttaaa atttgcccct gtaagcgata gcccatgcgg
     3301 ttactttgcg ggctaagctg ccagggcgaa cgccagaatg catcctgcga ggcgcgatcg
     3361 aactcatgat attccggccc cggcaaggcg cgaatgcggt tgccccacag cagctgttta
     3421 acgccctgcg cttccataaa atcacgcttc gatttgccaa tcgggagtcg atcaccatcc
     3481 ttcagtaaac ggccttccag cccgccaatc cccacgttga gatcggtgct gcatgacccc
     3541 attaccggcg gaacatcaat accacccgcg accgccagat aactgcgcat gccgtgctgc
     3601 gggcgtttaa gcgttaaacg ctggcctgct ttcatcggca agcgccagcc ggtccagacg
     3661 gcgttatcat ccagccgcgc ttcgcaaccg gcacccgtca gagcaaacca cccatcagtt
     3721 tcgaactcaa ccgttaactg accgagcgtg atctccagcg cgggggcatt ggcgtcatta
     3781 cccaccagca ggttagcaat gcgtaacgca ggcatatcca gtgcgccgca gtggctgata
     3841 cccgactggc gaaaaccgtg acgaccgcca tcctgcacag tggtatacat gcccgcacga
     3901 ataatcttca gcatactccc tccttctgcg gtacaaagcg cacgctgtct cccggacgta
     3961 ataagatggg ttcgtcacgc gccggatcaa acaggctgag tgaggtatga ccaatcaact
     4021 gccagccacc cggcgttgcc agcggataaa caccagtctg cggcccgccg atcccgacag
     4081 aacctgccgg aacgagcaag cgcggttcag cgcgccgtgg cgtgtgtagt tgttccggca
     4141 aactcccgag atacgggaag cccggttgaa aacctaaaaa ccagaccacg tattccacgg
     4201 aggagtgcaa ttcaacaacc tgtttttcgc tcaacccgca atgcgccgcg accaccgcca
     4261 aatccggtcc gcctgcacca ccgtaaacca ccggaatttc aataaagcga gactcaggtt
     4321 ccagggcctc gctctcctcc caccagcgtt gcaaaagctc tatggcatcc agcgccagcg
     4381 actcaggatt acgcaaaatc accgtgatat tgttcatgcc gggaatggct tcaaccacat
     4441 tcggcatatc caccagacgc tgcgccagtc gccagatccg tttctggcta gccagcgtca
     4501 ccggcggttc cagttccagc actaccgccg tttcacctat cagataacaa cgcgctcgtt
     4561 gcactttcga tccctctgat tattcgttat gcaggattag gaatatcaat aaaggtcaca
     4621 tcaagatcgg tattttcatt cagccactcg ctcaatgcgc gaataccacc acgttcagtg
     4681 gcatggtgac ctgcagcata aaaatgcaat ccctgctcgc gggctgaatg aatggtctgt
     4741 tcagaaactt cgccagtaat aaaagcatcc acgccaaaac gcgcggcgct atcgataaaa
     4801 ctttgcccgc cgcccgtgca ccaggcgacg cgctggacca cctcaggtcc ggtatcgcca
     4861 caccataacg gcttacgtcc cagacgcgct tcaatccagg aggctagttc cagtcccggc
     4921 acaggcatgg tcagctctcc ccacggcacc aacggctcaa tttcgcccat gaccgtgatc
     4981 cccagtaacg ccgccagctg tgcgttattg cccagctcag gatgtgcgtc aagcggcaaa
     5041 tgccagccat acaggttgat atcattcgcc agcaacgttt ttaaacggtt acgcttcatt
     5101 ccgcgaatga ccggagactc tcctttccag aagtagccat gatgcacaat gaccgcatcc
     5161 gcgcccagac gcactgcctc atcgagcaaa gcctggctgg cggtgacacc ggtaacaatt
     5221 ttttgcaccg tctctttgcc ttccacctgc aaaccattcg gcgcgtaatc actaatcgcc
     5281 gcgctgttca gtttttcgtt aatcagttgt tccagttcgg tgtttttcat cttcgcgcct
     5341 tccgtattct gatagctaca ccgttaacat agcgttacct cgcctgttcg tcgatagcca
     5401 atcttttgac atattaagaa acaaacccga cgccaaaaga cgcaaattgt ttatatcatc
     5461 acgcttcagc taatgtatat ttatgcaatc agacagcata ttgcataaat aatcagatct
     5521 gtatcaaagt tttaacttta aggaaacaca agcacgccgc gcaactatta cgtgacgttg
     5581 ccgtcaattg tggaattatt atgaataaac acgcatcaca gccgcgcgct atttactatg
     5641 tcgttgcgct gcaaatctgg gaatatttta gcttttacgg catgcgtgcc ctgctgattc
     5701 tctatctcac caatcaacta aaatacaacg atactcacgc ctacgagtta tttagcgcct
     5761 actgttcgct ggtgtatgtc acgccaatcc tcggtggctt tttggcggat aaagttctcg
     5821 gcaatcgcat ggcggtgatg ctgggggcgt tattgatggc gatcggtcat gtggtgttgg
     5881 gtgccagtga gatccatccg tcattcctct atctgtccct ggcgataatt gtttgtggct
     5941 atggtctgtt taaatccaat gtcagttgcc tgctcggcga gctgtatgag ccaaccgatc
     6001 cgcgtcgtga tggcagtttc tcgctgatgt atgcagcggg taacgtgggg tctattatcg
     6061 cacctattgc ctgtggctac gcccaggaag agtacagctg ggcgatgggc tttggcctgg
     6121 cggcggtggg tatgatcgcg ggtctggtca ttttcttatg tggcaatcgt catttcacac
     6181 atacccgcgg cgttaataaa aaagtactgc gtgcgacaaa ctttctcctg cctaactggg
     6241 gatggctgct ggttctgctg gtggcaacgc ctgcgctgat taccgtattg ttctggaaag
     6301 agtggtcggt atacgcctta attgtcgcga ctattattgg cctgggtgta ctggcaaaaa
     6361 tttatcgcaa agcagaaaac cagaaacagc gtaaggagct ggggctgatt gtgacgctca
     6421 ccttcttcag tatgttgttc tgggccttcg cacaacaggg cggcagctcg attagccttt
     6481 atatcgaccg cttcgttaac cgcgatatgt ttggttatac cgttccgact gctatgttcc
     6541 agtcgattaa tgccttcgca gttatgctgt gcggtgtgtt cctggcgtgg gtggttaaag
     6601 aaagcgtcgc aggtaatcgt accgtgcgca tctggggaaa atttgctctt ggtctcggcc
     6661 tgatgagcgc cgggttctgc attctgacct taagcgcccg ctggtccgca atgtatggtc
     6721 actcttctct gccactgatg gtattaggcc tggcggtgat gggctttgcg gaactgttta
     6781 tcgacccggt tgccatgtcg caaattacgc gcattgaaat ccccggtgtg accggcgtat
     6841 taaccggcat ttatatgctg ctttccggca cgattgcgaa ctatctcgcg ggcgtgattg
     6901 ccgatcagac atcgcaggct tcgtttgatg cttccggggc gatcaactac tccatcaatg
     6961 catatattga agtatttgat caaattacct ggggcgcact ggcgtgtgta ggactggtac
     7021 tgatgatttg gctgtatcag gcgctgaaat tcagaaaccg cgcgctggcg ctggagtcat
     7081 aataggccag caccatacct gataaaacgc tcgctgcgtt ttatcaggct cctttcctcg
     7141 cttcttcgta cgctgccagc gttcgcagcc ttgcctcttt gtgatcaact atcggttgcg
     7201 gataatccag catcacacct gctttctgcg cccacttcca cggctcatgc accgctttcc
     7261 ctggtacatc gcgcagctcc ggtaaccatc gacgaataaa ctcgccctca cggtcaaatt
     7321 tctcgccctg ggttgtcggg ttgaaaatac gaaaatacgg cgctgcatcg gttccggttg
     7381 aagcggccca ctgccagcca ccgttattgg ctgccaaatc accatcaatc agctgcgaca
     7441 tgaaatatcg ctcgccttcg cgccagtcga tcaacaaatc tttcaccaga aaactggctg
     7501 taatcatccg tagccggtta tgcatccagc cagtgctgtt aagctgacgc atggcagcat
     7561 cgacaatcgg gtatcccgtt ttgccttcct gccaggcctg taaatgtgcg ggattgctct
     7621 gccactgcac acgatccgtc caggcaataa acggacaatg tttacacaac gaggggtaat
     7681 acgtcatcag atgacggtag aactcgcgcc agatcagctc actaagccag acactaccgg
     7741 ccccaccgtc cagcgcctgc ggctgttccg ccaacaagcg atgcaaacac tggcgaggcg
     7801 ataacccgcc cgttgccagg ctggcggaca aacgactggt gccttccact gccggaaaat
     7861 ctcgttgttg ctcatattct ccggcaccgt tctggcaaaa ctggcgtaat tgcgcaatcg
     7921 ccgctttttc ttccaccggg aaatgcgcag tatcgaaaga ctgacgagga taattcagcg
     7981 taatggatgg cgagggctct atcgatccgc tactacgaac ttttggcgca gcgacgcact
     8041 ccggcatccc ttcccgcagc cgtttcagcc aggcattctt aaaaggcgta aagactttgt
     8101 acatctcgtg attaccggtc atcaccgcgc caggcggcag gatcacgctg tcatcaaatc
     8161 cttcacacac cacgttacgc agcgctcttt caacttccac atcccgcgcc cgctcattca
     8221 cttcatactg atagttataa aacaggtggg taacgctgtt ttccgcgcac acctgtttaa
     8281 ctatttcgac actggcgaca aagtcatcca cttcacggaa caataaagga ataccttttt
     8341 ccgcaagcgc tatttgtagc ccattcagtt gagcattgat aagttcagcc tgacgcggcg
     8401 acatgttatg cgtcgcccac tggcgtggtg tagcgatata caacgccagc acgcgtgcag
     8461 acgaattgct gcaggcggca gccagtgcga gattatcgtg caaacgtaaa tcctggcgaa
     8521 accagaccag atgggtagtc ataaaactcc tgaatggcgc aagttaatca cacgcggcca
     8581 aagttcgaaa taacgctgcc ctgaaagcca ggcgtcagga taaagcgcca tatagtgttt
     8641 gatacgcatc agcggcgcaa gaagtggttg ctcgccacgg cgataactgt cgataagcgc
     8701 agccagctgc tggcgttctg tggaatcaat atgcgggcga aaataaccct gaacgtgcat
     8761 caaaacattg gtgtgatcgc gcgggttggc ggggtgagaa agcaaaacaa ctacgcgttg
     8821 gcggtactgg ttgtaatagt catccagatt ttgccactgg tgaatatcag ccacgaacgg
     8881 gccaagtttg cggtactccg gctgagaatg cgccagaaag acgagtttat agcggctgtg
     8941 ataatcgaga agcgccccgc gcgttaagcc atgttctttc agtcgatgta actcatgaag
     9001 ggcaaagata cggattaggg tgctgtcatc aaatcgttgt agattcatta ctgctcctga
     9061 acggtataaa ggagtaagtg tagacgatgg taaatgaatt ttatggggca gagtttttgc
     9121 ggggaagtat tttgttggta aaaatattat caacttcatc tgagcgagaa ttattctact
     9181 atttcccgag ctgcattcat tttttgtatt ttttattttt agaaaataac agttctcaaa
     9241 gcttaattac ctcactatta attgtatttc aaactaacaa tcgcactcca ttttctctct
     9301 ttaaaaaaca taaacattgt taaaacaaat atttatttcg ttatcttaaa tgctatttct
     9361 acatcactcg tccttataat caaattattc ttattcatag ctatttttgc aggtttaaaa
     9421 tagcggcttt caccaaagtc agccatgaaa attagactac aagttctccc agcctttgca
     9481 catgagaaaa accacccatc aactctattt attcctgaac ctttaacacc ataataaatc
     9541 agaatttctg ggtattgttc atccttcacg ttttcatatt tttggtattt aattgaaaac
     9601 caagagtcta tactgccaac atcttcaaaa aatattggag ctgatgtttc cgcatgaaca
     9661 tatgcagaaa atgctaacaa aatggcaata cttagtttgg taaaaatatc gttccacact
     9721 tttcaggata atctattggg gggaagggat cttttcctct aaatctaatt gctcccactc
     9781 cttgtttgtc agaccattcg ccatttgcat cctgacgata ccagtgataa tcccctccca
     9841 tgcctataaa attgtgagga cgaataaaca attgagcttt atggtaacca gatggacaac
     9901 tcccattatc taaatccttg gcaccatcat tttttgacgc ttcaaaaata ctaccgcaag
     9961 tgagtttaga aaactctttt ccagataatt ctccaggttg taatcctccg ccgccaaaaa
    10021 tcctactccc agggtttcca tacctattta gagcatatga ataacaatta tttacggcaa
    10081 gataatacgg atctgaattt aggtctcgat tgaatactgg agcaggttta tcaattaagc
    10141 ccagcggatc ggtaat
//
LOCUS       DADMJE010000153        10118 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.156, whole genome shotgun sequence.
ACCESSION   DADMJE010000153 DADMJE010000000
VERSION     DADMJE010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 10118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10118
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.156"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            206..358
                     /gene="hokA"
                     /locus_tag="JN001_003367"
     CDS             206..358
                     /gene="hokA"
                     /locus_tag="JN001_003367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001135724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin HokA"
                     /protein_id="HAY9054491.1"
                     /translation="MPQKYGLLSLIVICFTLLFFTWMVRDSLCELHIKQGRYELAAFL
                     ACNLKE"
     gene            complement(546..758)
                     /gene="cspA"
                     /locus_tag="JN001_003368"
     CDS             complement(546..758)
                     /gene="cspA"
                     /locus_tag="JN001_003368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone/antiterminator CspA"
                     /protein_id="HAY9054492.1"
                     /translation="MSGKMTGIVKWFNADKGFGFITPDDGSKDVFVHFSAIQNDGYKS
                     LDEGQKVSFTIESGAKGPAAGNVTSL"
     gene            complement(1039..1329)
                     /locus_tag="JN001_003369"
     CDS             complement(1039..1329)
                     /locus_tag="JN001_003369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator"
                     /protein_id="HAY9054493.1"
                     /translation="MEYKDPMHELLSSLEQIVFKDETQKITLTHRTTSCTEIEQLRKG
                     TGLKIDDFARVLGISVAMVKEWESRRVKPSSAELKLMRLIQANPALSKQLME"
     gene            1762..2472
                     /locus_tag="JN001_003370"
     CDS             1762..2472
                     /locus_tag="JN001_003370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3053 domain-containing protein"
                     /protein_id="HAY9054494.1"
                     /translation="MATGKSCSRWFAPLAALLMVVSLSGCFDKEGDQRKAFIDFLQNT
                     VMRSGERLPTLTADQKKQFGPFVSDYAILYGYSQQVNQAMDSGLRPVVDSVNAIRVPQ
                     DYVTQSGPLREMNGSLGVLAQQLQNAKLQADAAHSALKQTDDLKPVFDQAFTKVVTTP
                     ADALQPLIPVAQTFTQQLVMVGDYIAQQGTQVSFVANGIQFPTSQQASEYNKLIAPLP
                     AQHQAFNQAWTTAVTATQ"
     gene            complement(2522..3496)
                     /gene="ghrB"
                     /locus_tag="JN001_003371"
     CDS             complement(2522..3496)
                     /gene="ghrB"
                     /locus_tag="JN001_003371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312465.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxylate/hydroxypyruvate reductase GhrB"
                     /protein_id="HAY9054495.1"
                     /translation="MKPSVILYKALPDDLLQRLQEHFTVHQVANLSPQTVEQNAAIFA
                     EAEGLLGSNENVDAALLEKMPKLRATSTISVGYDNFDVDALTARKILLMHTPTVLTET
                     VADTLMALVLSTARRVVEVAERVKAGEWTASIGPDWYGTDVHHKTLGIVGMGRIGMAL
                     AQRAHFGFNMPILYNARRHHKEAEERFNARYCDLDTLLQESDFVCLILPLTDETHHLF
                     GAEQFAKMKPSAIFINAGRGPVVDENALIAALQKGEIHAAGLDVFEQEPLSVDSPLLS
                     MANVVAVPHIGSATHETRYGMAACAVDNLIDALQGKVEKNCVNPHVAD"
     gene            complement(3600..4259)
                     /locus_tag="JN001_003372"
     CDS             complement(3600..4259)
                     /locus_tag="JN001_003372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OmpA family lipoprotein"
                     /protein_id="HAY9054496.1"
                     /translation="MKKRVYLIAAVVSGALAVSGCTTNPYTGEREAGKSAIGAGLDSL
                     VGAGIGALSSSKKDRGKGALIGAAAGAALGGGVGYYMDVQEAKLRDKMRGTGVSVTRS
                     GDNIILNMPNNVTFDSSSATLKPAGANTLTGVAMVLKEYPKTAVNVIGYTDSTGGHDL
                     NMRLSQQRADSVASALITQGVDASRIRTQGLGPANPIASNSTAEGKAQNRRVEITLSP
                     L"
     gene            4412..6745
                     /locus_tag="JN001_003373"
     CDS             4412..6745
                     /locus_tag="JN001_003373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418007.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin guanine dinucleotide-containing
                     S/N-oxide reductase"
                     /protein_id="HAY9054497.1"
                     /translation="MANSSSRYSVLTAAHWGPMLVETDGETVFSSRGALATGMENSLQ
                     SAVRDQVHSNTRVRFPMVRKGFLASPENPQGIRGQDEFVHVSWDEALDLIHQQHKRIR
                     EAYGPASIFAGSYGWRSNGVLHKASTLLQRYMALAGGYTGHLGDYSTGAAQAIMPYVV
                     GGSEVYQQQTSWPLVLEHSDVVVLWSANPLNTLKIAWNASDEQGLSYFSALRDSGKKL
                     ICIDPMRSETVDFFGDKMEWVAPHMGTDVALMLGIAHTLVENGWHDEAFLARCTTGYA
                     VFASYLLGESDGIAKTAEWAAGICGVHAAKIRELAALFHQNTTMLMAGWGMQRQQLGE
                     QKHWMIVTLAAMLGQIGTPGGGFGLSYHFANGGNPTRCSAVLSSMQGSLPGGSDAVDK
                     IPVARIVEALENPGCAYQHNGMNRLFPDIRFIWWAGGANFTHHQDTNRLIRAWQKPEL
                     VVISECFWTAAAKHADIVLPATTSFERNDLTMTGDYSNQHLVPMKQVVPPRYEARNDF
                     DVFAELSERWEKGGYARFTEGKSELQWLETFYNVARQRGASQQVELPPFAEFWQANQL
                     IEMPENPDSERFIRFADFCRDPQAHPLKTASGKIEIFSQRIADYAYPDCPGHPMWLEP
                     DEWQGNAEPEQLQVLSAHPAHRLHSQLNYSSLRELYAVANREPVTIHPDDALARGIQD
                     GDTVRLWNARGQILAGVVISEGIKPGVICIHEGAWPDLDLTADGICKNGAVNVLTKDL
                     PSSRLGNGCAGNTALAWLEKYNGPELTLTAFEPPASS"
     gene            complement(6714..7154)
                     /locus_tag="JN001_003374"
     CDS             complement(6714..7154)
                     /locus_tag="JN001_003374"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY9054498.1"
                     /translation="MIREAQRSELPAILELWLESTTWGHPFIKANYWRDCIPLVRDAY
                     LANAQNWVWEEDSKLLGFVSIMEGRFLAAMFVAPKAVRRGIGKALMQYVQQRHPHLML
                     EVYQKNQPAINFYQAQGFHIVDCAWQDETQLPTWIMSWPVVQTL"
     gene            complement(7151..7714)
                     /gene="tag"
                     /locus_tag="JN001_003375"
     CDS             complement(7151..7714)
                     /gene="tag"
                     /locus_tag="JN001_003375"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HAY9054499.1"
                     /translation="MERCGWVSQDPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGL
                     SWITVLKKRENYRACFHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAY
                     LQMEQNGEPFADFVWSFVNHQPQVTQATTLSEIPTSTPASDALSKALKKRGFKFVGTT
                     ICYSFMQACGLVNDHVVGCCCYPGNKP"
     gene            7872..8570
                     /locus_tag="JN001_003376"
     CDS             7872..8570
                     /locus_tag="JN001_003376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709326.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
                     /protein_id="HAY9054500.1"
                     /translation="MIIKKSGGRWQLSLLASVVISAFFLNTAYAWQQEYIVDTQPGHS
                     TERYTWDSDHQPDYNDILSQRIQSSQRALGLEVNLAEETPVDVTSSMSMGWNFPLYEQ
                     VTTGPVAALHYDGTTTSMYNEFGDSTTTLTDPLWHASVSSLGWRVDSRLGDLRPWAQI
                     SYNQQFGENIWKAQSGLSRMTATNQNGNWLDVTVGADMLLNQNIAAYAALTQAENTTN
                     NSDYLYTMGVSARF"
     gene            8798..10000
                     /locus_tag="JN001_003377"
     CDS             8798..10000
                     /locus_tag="JN001_003377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054501.1"
                     /translation="MTPSNYQRTRWLTLIGTIITQFALGSVYTWSLFNGALSAKLDAP
                     VSQVAFSFGLLSLGLAISSSVAGKLQERFGVKRVTMASGILLGLGFFLTAHSDNLMML
                     WLSAGVLVGLADGAGYLLTLSNCVKWFPERKGLISAFAIGSYGLGSLGFKFIDTQLLE
                     TVGLEKTFVIWGAIALVMIVFGATLMKDAPKQEVKTSNGVVEKDYTLAESMRKPQYWM
                     LAVMFLTACMSGLYVIGVAKDIAQSLAHLDVVSAANAVTVISIANLSGRLVLGILSDK
                     IARIRVITIGQVISLVGMAALLFAPLNAVTFFAAIACVAFNFGGTITVFPSLVSEFFG
                     LNNLAKNYGVIYLGFGIGSIFGSIIASLFGGFYVTFYVIFALLILSLALSTTIRQPEQ
                     KMLREAHI"
BASE COUNT         2427 a         2434 c         2591 g         2666 t
ORIGIN      
        1 tttttttagg attatatcaa ggagaagaaa caaacttatt aagctagaat agctacgggt
       61 gcttgagact gtttgtctca ggtattcacc gaaaggcaga cagagaaaag ccccacctga
      121 ctataaatca aagtgaggct accctatgcc tgaacaccat aaggttagcc tcttactcgt
      181 tggaaatcaa cacagggggc tgggaatgcc gcaaaaatac ggattacttt cattaatagt
      241 gatttgtttc acgcttttat ttttcacctg gatggtaaga gattcactgt gtgaattgca
      301 tattaaacag gggcgttatg agctggcggc atttttagcc tgcaatttaa aagagtaaga
      361 gtcttcggcg ggaaattatt cccgcctttc ttacggcgtt gcgcattctc attgcaccca
      421 catttattct tcacaaaaat aataatagat tttactacgc gatcgattat ttatttcctg
      481 aaaaaaaata aaaaaaatcc ccgccaaatg gcagggatct tagattctgt gcttttaagc
      541 agagattaca ggctggttac gttaccagct gccgggcctt tagcgccgct ttcgatggtg
      601 aaggacactt tctgaccttc gtccagagat ttgtaaccat cgttctggat agcagagaag
      661 tgtacgaaca catctttaga gccatcgtca ggagtgatga agccgaagcc tttgtcagcg
      721 ttgaaccatt ttacgatacc agtcatttta ccggacatag tgtattacct ttaataatta
      781 agtgtgcctt tcggcgatat ggcgtgcttt acagattttg aagcgttaaa ggaatgtgca
      841 ctacgagggg tatcaacgat aactcttgaa gggacttgcc ttactacact gctttaatgg
      901 tctgtacgtc aaaccgttga tgtgcattaa gccacgcatt ggcgggtgat gcaacaatta
      961 tttttcatat ttatgattaa tcggttggaa aacggtcctg tcatcaggac cgtaaacagc
     1021 aataaagtgg ataaaagtct attccatcaa ctgcttactt aatgccgggt tggcttgaat
     1081 caaacgcatc aattttagtt cggcacttga aggcttcacg cgtctggatt cccattcctt
     1141 taccatggcg actgatatgc ccaaaacccg ggcgaaatca tcgattttta accctgtccc
     1201 ttttcgtaac tgctcaattt cggtacagga cgttgttctg tgcgtcaggg taattttctg
     1261 cgtttcatct ttaaaaacaa tctgttccag gctgctcaac agctcatgca ttggatcttt
     1321 atattccatt gaaaactcct caaatcacac tgcgggatcg tgaattgcat cgaagctcat
     1381 taagaatagt cgggaaaagc agacacagcg gggtgaagtc agggcatgct ctggctatga
     1441 ttcgattcag ccagtcattt agcgtgactt atagccacct aacgatctga taaatgccga
     1501 tatatctctt accactcctg ttttgtaaag atttcgaaaa tctaaagttc tgcgaaggcg
     1561 taaatctcgg gctacaaaaa agcaacggca atatcatttt ttaacaatga aacaacaaat
     1621 taaccttgtt tcattttctc catgatttta ccaggaagat tacgtagaaa gggtatcctg
     1681 caagcctgtc ctggactatc cttgtcacgt cagacacgcg tgtgtcgttg tgcgcttttt
     1741 ttgggtgaaa ggagtaagaa aatggcgaca ggaaagtcct gctctcgctg gtttgcgcct
     1801 cttgcggcgt tattaatggt agttagcctg agtgggtgtt ttgataaaga aggcgatcag
     1861 cgtaaagcgt ttatcgactt cctgcagaat acagtgatgc gtagcggtga acgtctacca
     1921 accctgactg ccgatcagaa aaaacagttt ggtccttttg tctctgatta cgcgattctg
     1981 tatggttatt ctcagcaggt gaatcaggcg atggattccg gtctgcgccc ggtcgtagac
     2041 agcgttaacg caattcgcgt accgcaggat tacgttacgc aaagcggtcc gctgcgtgaa
     2101 atgaacggtt cgctgggtgt gctggcgcaa caactgcaaa atgcgaagtt gcaggccgat
     2161 gctgcgcact ctgcgctaaa acagaccgat gatttgaaac cggtctttga tcaggcattc
     2221 accaaagtgg taacgacgcc agctgatgca ttgcaaccgt tgattccggt tgcacaaact
     2281 ttcacgcaac aactggtgat ggttggagac tacattgctc aacaaggtac tcaggtgagc
     2341 tttgtagcaa atggtatcca gttcccgact tcgcagcagg caagtgaata taacaaactg
     2401 attgcgccgt taccggcaca acatcaggcg tttaatcagg cctggactac agcagttact
     2461 gcaacccaat aaagagtaaa agcccgagcg attatcgggc tttacttcac gcagtcgcgg
     2521 cttagtccgc gacgtgcgga ttcacacagt tcttctcaac ctttccttgt aacgcatcaa
     2581 tcaaattatc cacggcacag gcggccatgc cataacgcgt ctcatgggtg gcagatccaa
     2641 tatgcggtac tgcgacgacg ttggccattg agagcaacgg cgaatctacg gacagtggct
     2701 cttgttcgaa gacatccagc ccggcggcgt gaatttcgcc tttctgcaat gctgcgatca
     2761 gtgcattttc gtcaaccacc gggccacgtc cggcattaat gaaaatggcg gagggtttca
     2821 ttttggcgaa ttgttctgcg ccaaacagat gatgcgtctc atcagttaac ggcaggatca
     2881 ggcaaacgaa atctgactct tgtaacagag tatccaaatc gcagtagcgg gcgttgaagc
     2941 gttcttctgc ttctttatgg tggcggcgcg cgttatagag gatgggcatg ttgaagccaa
     3001 agtgcgcacg ttgtgccagc gccatgccga tccgtcccat cccgacaatg cccagtgttt
     3061 tatggtgaac gtcagtgccg taccagtccg ggcctatgct cgcggtccat tcgcctgctt
     3121 ttacccgttc tgctacctcc acaacccgac gagcggtaga caacaccagc gccatcagcg
     3181 tatcggcgac ggtttctgtt aatacggttg gcgtgtgcat cagcagaatt tttcgggcgg
     3241 taagcgcatc gacatcaaaa ttgtcatagc cgacggagat cgttgatgtg gcacgcagtt
     3301 tcggcatttt ttccagcaat gcggcatcta cattctcgtt tgaacccagt aaaccttcag
     3361 cttcggcaaa aattgctgca ttttgttcga cggtttgtgg gctgaggttt gccacctggt
     3421 gaacggtgaa atgctcttgc aggcgttgca gtaaatcatc aggtaaggct ttgtagagga
     3481 taacggacgg cttcatgctt ctctccattc actgataagg cgctcacctt agcctgaaat
     3541 atgatgaagg aaaactgaag aatgccaggt gatttctgca tcacctggca tgaaagggat
     3601 tacagcgggc ttaaggtaat ttctacacgg cggttttgcg ccttaccttc tgcggtgctg
     3661 ttgctggcga ttgggttagc cgggccaagg ccctgagtac ggatgcggct ggcgtccacg
     3721 ccctgggtga tcaacgcgct ggcaacggaa tccgcacgct gctgggagag acgcatgttc
     3781 aggtcgtgac cccccgtgct gtcggtataa ccaatcacgt taaccgccgt tttcggatac
     3841 tctttcagca ccattgccac gccggtcagg gtgttagcgc ctgccggttt cagggtcgcg
     3901 ctgctgctgt cgaaggtcac attgttcggc atattgagga taatgttatc cccgctgcgg
     3961 gttacgctaa caccagtgcc gcgcattttg tcacgcagct tcgcttcctg cacatccatg
     4021 taataaccca cgccgccgcc cagagctgcg cctgctgctg cgccaatcag cgcgccttta
     4081 ccgcgatctt tcttcgaaga agagagcgca ccaatacccg cgcccacgag agagtccaga
     4141 cctgcgccga tagcagattt gcctgcttcg cgttcgccgg tgtaagggtt agttgtgcag
     4201 ccagataccg ccagagcgcc actcactacg gcggcaataa gataaacacg tttcttcatt
     4261 gttaatcctt aataaccttt ttattctttg ccacgggttc cgtggcggga gattatgccg
     4321 cgtgaacatg aagattattc ctgggaatac tcggaaattt gtaagtaata tttaactgct
     4381 caatacatct aacctttcag gagtcttcgg tttggccaac tcatcctcac gatattccgt
     4441 tctgactgcc gcccactggg ggcccatgct ggttgaaacc gacggcgaaa ccgtgtttag
     4501 ctcgcgtggc gcgttagcca caggaatgga aaactccttg cagagcgcgg ttcgcgacca
     4561 ggttcacagc aatacgcggg tacgatttcc aatggtgcgc aaaggctttc tcgcgtcacc
     4621 ggaaaacccg caaggcattc gtgggcagga tgaatttgtt cacgtgagtt gggatgaggc
     4681 gctggatctt attcaccaac aacataaacg cattcgtgag gcttatggtc cggcatcgat
     4741 ttttgctggt tcctacggct ggcgttcaaa cggcgtgctg cataaggcct cgacattatt
     4801 acaacgctat atggcgctgg caggcggtta taccgggcat ctgggggatt attcgaccgg
     4861 tgcggcacag gcgatcatgc cgtatgtcgt gggtggcagc gaagtttatc aacagcaaac
     4921 cagttggccg ctggtgctgg aacatagcga tgtcgtggtg ttgtggagtg ctaacccact
     4981 caatacgctg aaaattgcgt ggaatgcatc tgatgagcag gggctttctt acttttccgc
     5041 actgcgtgac agcgggaaaa agctgatctg tattgatcca atgcgatcgg aaaccgtcga
     5101 tttctttggc gataaaatgg agtgggtggc accgcacatg ggcaccgatg ttgcgctgat
     5161 gctggggatc gcccatacgc tggtggaaaa tggttggcac gacgaagcgt ttctggcgcg
     5221 ttgcaccaca ggttatgccg tcttcgcctc ttatttgctg ggcgagagtg acggaatagc
     5281 caaaaccgcc gaatgggcgg cagggatttg tggggttcac gcagcgaaaa ttcgcgagtt
     5341 ggcggctctt ttccaccaaa acacgaccat gctgatggct ggctggggaa tgcagcgcca
     5401 acagcttggt gagcaaaaac actggatgat cgtcacgctg gcggcaatgt tggggcaaat
     5461 cggcacaccc ggcggcggtt ttggtctttc ttatcatttt gccaatggtg gtaatcccac
     5521 gcggtgttct gcggtgctct cttccatgca gggtagcttg ccgggtggca gcgatgcggt
     5581 agataaaatc cctgttgccc gtattgttga agcactggaa aaccctggct gcgcatacca
     5641 acacaatggc atgaatcgcc tcttcccgga tattcgcttt atctggtggg cgggtggcgc
     5701 caacttcacc catcatcagg acactaatcg cctgatacga gcttggcaaa aaccggagct
     5761 ggtagttatc tccgaatgct tctggacggc ggcggcaaaa cacgcggata tcgttctgcc
     5821 tgcgactacc tcttttgagc gtaatgatct caccatgacc ggcgattaca gtaatcagca
     5881 tctggtgccg atgaagcaag tggtgccgcc acgctatgaa gcgcgtaatg attttgatgt
     5941 ttttgccgag ttaagtgaac gctgggagaa gggcggttat gcacgtttta cggaaggaaa
     6001 aagtgagttg caatggctgg aaacgtttta taacgttgcc cgacagcgcg gggcaagcca
     6061 gcaggttgaa ttgccgccat ttgctgagtt ctggcaagcc aatcagttaa ttgagatgcc
     6121 ggaaaacccg gacagcgagc ggtttattcg cttcgctgat ttttgccgcg atccgcaggc
     6181 gcatccatta aaaaccgcca gcggtaagat tgaaatcttc tcgcagcgta ttgccgatta
     6241 cgcttatccg gattgcccgg ggcatccaat gtggctggag ccggacgaat ggcagggcaa
     6301 tgccgaaccg gaacagttac aggtactttc tgctcatccg gcgcatcgtc tgcacagcca
     6361 gctgaattac agttctctgc gcgaattgta tgcggtggca aatcgtgagc ctgtcaccat
     6421 tcatcctgac gatgccctgg cgcgcggcat tcaagatggc gatactgttc ggctgtggaa
     6481 cgcacgcggg caaattcttg ccggagtggt cattagcgag ggaattaaac ctggcgtgat
     6541 ttgtattcac gaaggggcat ggccggattt ggatttaacc gctgacggta tttgtaaaaa
     6601 cggcgcagtc aacgtgctga ccaaagatct ccccagctcg cggctgggga atggctgtgc
     6661 gggtaatacg gcgctggcat ggctggaaaa atacaacggt ccggaactga cacttacagc
     6721 gtttgaacca ccggccagct cataatccag gtgggtagtt gggtttcatc ctgccatgcg
     6781 caatcgacaa tgtgaaaacc ctgcgcttgg taaaaattta tcgccggttg atttttttga
     6841 taaacctcca gcatcaggtg gggatggcgc tgctgcacat attgcatcag cgccttacca
     6901 ataccgcgcc tgacggcctt cggtgcgaca aacatcgctg ccagaaatcg gccttccata
     6961 atgctgacaa aaccgagaag cttactgtct tcttcccaga cccagttttg cgcattggca
     7021 agatacgcat cccgcaccag cggaatgcaa tcacgccagt aattcgcttt tataaaggga
     7081 tgtccccagg ttgtactttc cagccacagt tcgaggatcg cggggagttc tgaacgttgc
     7141 gcttcccgaa tcatggttta tttcccggat agcaacagca gccaaccaca tgatcattca
     7201 ccagcccaca tgcctgcata aaggagtaac agattgtggt accgacaaac ttaaaaccac
     7261 gttttttcag tgctttagat agggcgtcgg aggcgggcgt agatgtgggg atttcgctca
     7321 acgttgtggc ttgtgtcacc tgtggctgat gatttacaaa cgaccagaca aagtcggcaa
     7381 acggttcgcc gttctgttcc atttgcaggt acgcccgcgc attaccaata attgcctgaa
     7441 ttttcccgcg atggcggata atcccggcgt cctgtaccag tctttcgaca tcctcttcct
     7501 gcattgctgc gaccttcacc ggatcgaact gatgaaagca ggcgcgatag ttttcgcgtt
     7561 ttttgaggac ggtgatccac gataacccag cctgctgccc ttcaaggcag atcatttcga
     7621 acagtttttt actgtcagtt tcaggcacgc cccactcatt atcatggtag gcaatataaa
     7681 gcgggtcctg actcacccag ccgcaacgtt ccatactttc cctcgctatg tacccgatcg
     7741 taaaaatttc agccgctttt cttgacgcat cggtgaaaaa gtcaatattt aatacagggc
     7801 tactatgccc gatatccttc atacaatgac aataatattg ccgaattcgg ctcttccctg
     7861 gagtcgtgtt aatgatcata aaaaaaagcg gtggtcgctg gcagctaagc ctgctggcga
     7921 gcgtggtaat cagcgccttt tttctcaaca cagcttacgc ctggcaacaa gaatatatcg
     7981 ttgatacgca acccggacat tccacagagc gttacacctg ggatagtgat catcaacctg
     8041 attacaacga tattttgtcg caacgtattc aaagtagcca aagggcgctg ggactggaag
     8101 tcaatctggc ggaagaaact cctgtggatg tgaccagcag tatgagtatg ggctggaatt
     8161 ttcctttata tgaacaggtt acaaccggcc cggtcgcggc attacattac gatggcacaa
     8221 ccacctcgat gtataacgag tttggcgaca gtactaccac gctgaccgat ccgttatggc
     8281 atgccagcgt gagtagctta ggctggcgtg ttgactcccg gcttggcgat ctccgaccct
     8341 gggcgcaaat cagctataac cagcaatttg gcgagaatat ctggaaggcg caatcaggcc
     8401 tgagccggat gacggcgaca aaccagaacg gcaactggct ggatgtcacc gtaggcgctg
     8461 atatgttgct caatcaaaat attgccgcct atgccgcgct aactcaggca gaaaatacca
     8521 ctaataatag cgactatctg tatacgatgg gggttagcgc cagattttaa cgtaacagtc
     8581 acaattgaaa ccattgaata acaatagttg tggtgatagt gggtgctaac ttacaaataa
     8641 taaatttggt gaataattgt cgcgtcattc attcctgaac taaggcattt cattccgttc
     8701 tgatggcatt tcatgccgtt tttccccagg cataaaatgc acttcgttat ggttgtcggc
     8761 agagattttt cctttttatt actgcaggaa tactgccatg acaccttcaa attatcagcg
     8821 tacccgctgg ctgacactca tcggtactat cattacccag tttgcgctgg ggtcggttta
     8881 tacctggagc ctgtttaatg gcgcgctttc tgccaagctg gatgcgccgg taagccaggt
     8941 cgctttctct ttcggcttgt taagtctggg gctggcaatt tcatcttctg ttgcggggaa
     9001 attacaggaa cgttttggcg ttaaacgcgt cactatggct tccggcattt tgctaggatt
     9061 aggcttcttc ctgacagcgc attctgacaa cctgatgatg ctgtggttaa gcgccggtgt
     9121 gctggtcggt ctggcggatg gcgcgggtta cctgctgacg ctctctaact gcgtgaagtg
     9181 gttcccggag cgtaaaggtc tgatctccgc gttcgctatc ggttcttatg gtcttggtag
     9241 cctgggtttc aaatttatcg acacgcagct gctggaaacg gtgggtctgg aaaaaacatt
     9301 tgtgatttgg ggagcgattg cgctggtgat gattgttttc ggcgcaacgt taatgaaaga
     9361 cgcaccaaaa caggaagtga aaaccagcaa tggtgtggtg gagaaagatt acacgctggc
     9421 agagtcgatg cgtaaaccgc agtactggat gttagcggta atgttcctga ctgcctgcat
     9481 gagcggcctg tacgtgattg gggtagcgaa agatatcgcc caaagtctgg cacaccttga
     9541 tgtggtttcc gcagccaatg cagtaacggt tatttccatc gctaaccttt caggtcgtct
     9601 ggtgctgggc attctgtctg acaaaattgc ccgtatccgt gttatcacca ttggtcaggt
     9661 gatttcgctg gtgggtatgg cggccctgct gtttgcacca ttaaatgcag tgacgttctt
     9721 tgcagcgatt gcctgcgtgg catttaactt tggcggcact attaccgtct ttccatcact
     9781 ggtcagtgag ttcttcggcc tcaataacct ggcgaaaaac tacggtgtga tttacctcgg
     9841 tttcggtatc ggtagcattt ttggttcgat tatcgcctca ctgtttggcg gtttctatgt
     9901 gaccttctac gtgattttcg ccctgctgat tctgtcattg gcgctttcta cgacgattcg
     9961 tcagccagag cagaaaatgt tgcgtgaggc gcatatttag aaatatgttg ctactgaaat
    10021 aaatacgagg agggagactt caaagtctcc cttttttatg gacgcatatt aaaagaacaa
    10081 taatattcat accacaaata tattttattt atatatta
//
LOCUS       DADMJE010000154         9999 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.157, whole genome shotgun sequence.
ACCESSION   DADMJE010000154 DADMJE010000000
VERSION     DADMJE010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9999
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.157"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(264..1607)
                     /gene="gdhA"
                     /locus_tag="JN001_003378"
     CDS             complement(264..1607)
                     /gene="gdhA"
                     /locus_tag="JN001_003378"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013366584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HAY9054502.1"
                     /translation="MDQTYSLESFLNHVQKRDPNQTEFAQAVREVMTTLWPFLEQNPK
                     YRQMSLLERLVEPERVIQFRVVWVDDRNQVQVNRAWRVQFSSAIGPYKGGMRFHPSVN
                     LSILKFLGFEQTFKNALTTLPMGGGKGGSDFDPKGKSESEVMRFCQALMTELYRHLGA
                     DTDVPAGDIGVGGREVGFMAGMMKKLSNNTACVFTGKGLSFGGSLIRPEATGYGLVYF
                     TEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTK
                     EKLARLIEIKASRDGRVADYAKEFGLVYLEGQQPWSVPVDIALPCATQNELDVGAAHQ
                     LIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLG
                     WKAEKVDARLHHIMLDIHHACVEHGGEGEQTNYVQGANIAGFVKVADAMLAQGVI"
     gene            1843..2115
                     /locus_tag="JN001_003379"
     CDS             1843..2115
                     /locus_tag="JN001_003379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnjH family protein"
                     /protein_id="HAY9054503.1"
                     /translation="MSRALFAVVLAFPLIALANPHYRPDVEVNVPPEVFSSGGQSAQP
                     CTQCCVYQDQNYSEGAVIKAEGILLQCQRDDKTLSTNPLLWRRVKP"
     gene            complement(2081..2488)
                     /gene="nudG"
                     /locus_tag="JN001_003380"
     CDS             complement(2081..2488)
                     /gene="nudG"
                     /locus_tag="JN001_003380"
                     /EC_number="3.6.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP pyrophosphohydrolase"
                     /protein_id="HAY9054504.1"
                     /translation="MKMIEVVAAIIERDGKILLAQRPAQSDQAGLWEFAGGKVELDES
                     QQQALVRELNEELGIEATVGEYVASHQREVSGRIIHLHAWHVPDFHGTLQAHEHQALV
                     WCSPEEALQYPLAPTDIPLLEAFMALRAARAAD"
     gene            2575..3186
                     /locus_tag="JN001_003381"
     CDS             2575..3186
                     /locus_tag="JN001_003381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416272.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY9054505.1"
                     /translation="MLDRHLHPRIKPLLHQCVRVLDKPGITPDGLTLVGFAIGVLALP
                     FLALGWYLAALVVILLNRLLDGLDGALARRRELTDAGGFLDISLDFLFYALVPFGFIL
                     AAPEQNALAGGWLLFAFISTGSSFLAFAALAAKHQIDNPGYAHKSFYYLGGLTEGTET
                     ILLFVLGCLFPAWFAWIFGALCWMTTFTRVWSGYLTLKSLQRQ"
     gene            complement(3195..4502)
                     /locus_tag="JN001_003382"
     CDS             complement(3195..4502)
                     /locus_tag="JN001_003382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416271.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase"
                     /protein_id="HAY9054506.1"
                     /translation="MKRVSQMTALAMALGLACASSWAAELAKPLTLDQLQQQNGKAID
                     TRPSAFYNGWPQTLNGPSGHEPAALNLSASWLDKMSTEQLNAWIKQHNLKADAPVALY
                     GNDKDVDAVKTRLQKAGFTHISILSDALSEPSRLQKLPHFEQLVYPQWLHDLQQGKEV
                     TAKPAGDWKVIEAAWGAPKLYLISHIPGADYIDTNEVESEPLWNKVSDEQLKAMLAKH
                     GIRHDTTVILYGRDVYAGARVAQIMLYAGVKDVRLLDGGWQTWSDAGLPVERGTPPKV
                     KAEPDFGVKIPAQPQLMLDMEQARGLLHRQDASLVSIRSWPEFIGTTSGYSYIKPKGE
                     IAGARWGHAGSDSTHMEDFHNPDGTMRSADDITAMWKAWNIKPEQQVSFYCGTGWRAS
                     ETFMYARAMGWKNVSVYDGGWYEWSSDPKNPVATGERGPDSSK"
     gene            complement(4569..5222)
                     /locus_tag="JN001_003383"
     CDS             complement(4569..5222)
                     /locus_tag="JN001_003383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HAY9054507.1"
                     /translation="MLCVKNVSLRLPESRLLTNVNFTVDKGDIVTLMGPSGCGKSTLF
                     SWMIGALAGQFSCTGELWLNEQRIDMLPTAQRQIGILFQDALLFDQFSVGQNLLLALP
                     STLKGTARRNAVKDALDRAGLAETYHQDPATLSGGQRARVALLRALLAQPKALLLDEP
                     FSRLDVALRDNFRQWVFSEVRELAIPVVQVTHDLQDVPADSSVLDMAQWSENYNKLR"
     gene            complement(5222..6757)
                     /locus_tag="JN001_003384"
                     /pseudo
     CDS             complement(5222..6757)
                     /locus_tag="JN001_003384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416269.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
     gene            complement(6730..7896)
                     /locus_tag="JN001_003385"
     CDS             complement(6730..7896)
                     /locus_tag="JN001_003385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416268.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HAY9054508.1"
                     /translation="MRHCGWLLGLLSLFSLATHASDWQEIKNEAKGQTVWFNAWGGDT
                     AINRYLDWVSGEMKTHYAINLKIVRLADAADAVKRIQTEAAAGRKTGGSVDLLWVNGE
                     NFRTLKEANLLQTGWAETLPNWRYVDTQLPVREDFSVPTQGAESPWGGAQLTFIARRD
                     VTPQPPQTPQALLEFAKANPGTVTYPRPPDFTGTAFLEQLLIMLTPDPAALKEAPDDA
                     TFARVTAPLWQYLDALHPYLWREGKDFPPSPARMDALLKAGTLRLSLTFNPAHAQQKI
                     ASGDLPASSYSFGFREGMIGNVHFVTIPANANASAAAKVVANFLLSPDAQLRKADPVV
                     WDDPSVLDPQKLPDGQREILQSRMPQDLPPVLAEPHAGWVNALEQEWLRRYGTH"
     gene            complement(7906..8454)
                     /locus_tag="JN001_003386"
     CDS             complement(7906..8454)
                     /locus_tag="JN001_003386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HAY9054509.1"
                     /translation="MGLPPLSKIPFILRPQAWLHRRHYGEVLSPIRWWGRIPFIFYLV
                     SMFVGWLERKRSPLDPVVRSLVSARIAQMCLCEFCVDITSMKVAERTGSTDKLLAVAD
                     WRQSPLFSDEERLALEYAEAASVTPPTVDDALRTRLAAHFDAQALTELTALIGLQNLS
                     ARFNSAMDIPAQGLCRIPEKRS"
     gene            complement(8454..9161)
                     /locus_tag="JN001_003387"
     CDS             complement(8454..9161)
                     /locus_tag="JN001_003387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001697152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY9054510.1"
                     /translation="MMKMQSRKIWYYCITLIILLFAMLLAWALLPGVHEFINRSVAAF
                     AAVDQQGIERFIQSYGALAAVVSFLLMILQAIAAPLPAFLITFANASLFGAFWGGLLS
                     WTSSMAGAALCFFIARVMGREVVEKLTGKTVLDSMDGFFTRYGKHTILVCRLLPFVPF
                     DPISYAAGLTSIRFRSFFISTGLGQLPATIVYSWAGSMLTGGTFWFVTGLFILFALTV
                     VIFMAKKIWLERQKRND"
     gene            complement(9176..9853)
                     /gene="ydjY"
                     /locus_tag="JN001_003388"
                     /pseudo
     CDS             complement(9176..9853)
                     /gene="ydjY"
                     /locus_tag="JN001_003388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416265.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="protein YdjY"
     gene            complement(9858..>9999)
                     /locus_tag="JN001_003389"
     CDS             complement(9858..>9999)
                     /locus_tag="JN001_003389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HAY9054511.1"
                     /translation="RFILQLCLAGLALFILVQLAKLYARHKHVDLSASRRSPLTHPKN
                     EG"
BASE COUNT         2385 a         2723 c         2583 g         2308 t
ORIGIN      
        1 atctgctgct atcgcagaaa gttaacggat gctgaacttg aagcgtgtta tcgttacgac
       61 aagcagtttt gggagcacta cagtaagaaa tgccgttggc ccataagaaa tgttccctgg
      121 ggagcatcat ccgttaaata ctcataaacg cctgaaattt tgccgggggc gctgcgcttg
      181 cccggcctac attagagcgt aactgcaatg aattgtgccc atttgtaggc ctgataagcg
      241 tagcgccatc aggcatttac aacttaaatc acaccctgcg ccagcatcgc atcggcaacc
      301 ttcacaaaac cggcaatgtt cgcgccctgc acgtagttgg tttgctcacc ttcaccacca
      361 tgctcaacac aggcatggtg gatatccagc atgatgtgat gcaaacgtgc gtcaactttc
      421 tcggctttcc agcccaggcg cgcagcgttt tgcgccattt caaggcctga cgttgctaca
      481 ccgccagcat tagccgcttt acccggtgca aacagtacgc ctgcctgctg gaacagttca
      541 gtcgcttcga tggtggtcgg catatttgcc ccttcggcga cggctttaac gccattggcg
      601 ataagctgat gcgcggcgcc aacatccagt tcgttctggg tggcgcaagg cagggcgata
      661 tcaaccggta cagaccacgg ctgttggcct tcgagataga ccagaccaaa ttctttggcg
      721 taatctgcca ctcgaccatc gcggctggct ttgatttcga taagacgtgc cagtttctct
      781 ttcgtgaatc cgctttcatc aactacagtg ccgctggagt ctgacgcagt gatcacacga
      841 gcaccaaatt ccatcgcttt ttcgatagcg tactgggcga cgttgccgga gccagaaacg
      901 gaaacgcgca tcccttcaaa acccataccg tggcgtttta acattgcttc tgtgaaataa
      961 accagaccgt agccggtagc ttccgggcga ataagactac cgccaaatga aaggccctta
     1021 ccggtgaaga cgcaggcggt attgttggag agctttttca tcatccccgc cataaagccg
     1081 acttcacgac caccaacgcc gatatcacct gccggaacgt cagtatccgc gcccagatga
     1141 cgataaagct cggtcatcag cgcctggcag aaacgcatca cttcgctttc gcttttacct
     1201 ttcgggtcaa aatcgctacc gcctttacca ccgcccatcg gcagggtagt cagggcattt
     1261 ttgaaggttt gttcgaagcc gaggaatttg agaatggaga ggttaactga cggatggaag
     1321 cgcataccgc ctttgtacgg gccgatggct gagctgaact gcacacgcca tgcacggttg
     1381 acctgtacct ggttgcgatc atcaacccat accacgcgaa actggatcac gcgctccggt
     1441 tcaaccagac gctccagtaa tgacatctgg cgatattttg gattttgttc aagaaaaggc
     1501 cagagtgtgg tcattacttc acgaacggct tgcgcgaact cggtttgatt cgggtcgcgc
     1561 ttttggacat ggttgaggaa tgactccaga gaatatgtct gatccataga tataaaaccc
     1621 ttatatatta atacgattgt gcttatgttg tttatgtcat gtgcttttgc agttttcgac
     1681 tataccatca agaatgtgac ggtaagcaag aaaaaaatga cccaggaaag caaattaata
     1741 acgagagtaa tctcataacc aaatgcgata actcagacgc taaagttttg ccacccggct
     1801 accgttatca gttacagaga caataacgtt aaggagttcc ctgtgagtcg agcattgttc
     1861 gccgtagtat tagcatttcc attaattgca ctggctaacc cgcattatcg tccggacgtg
     1921 gaggtaaacg taccgccaga agtgttcagt tcaggcgggc agtcagcgca gccctgtact
     1981 cagtgctgcg tttatcagga tcaaaattat tctgaagggg cggtaattaa agccgaagga
     2041 atactgctgc aatgccagcg ggatgacaaa acccttagca ctaatccgct gctctggcgg
     2101 cgcgtaaagc cataaacgcc tctaatagtg gaatgtcagt aggggccagc ggatattgca
     2161 gcgcctcttc aggtgagcac cagaccagcg cctgatgttc atgtgcctgt aacgtcccgt
     2221 ggaagtcggg tacgtgccag gcatgaagat ggataatccg gcccgaaact tctcgctgat
     2281 ggctggcaac atactcaccc acagttgctt cgatgcccaa ttcttcgttt aactcacgca
     2341 ccagtgcctg ctgctggctt tcatccagct cgactttacc accggcaaac tcccataatc
     2401 ccgcctgatc gctctgggcg gggcgttgcg cgagtaaaat tttgccatca cgttcaatga
     2461 tggcggcaac aacttcaatc attttcataa attacacacg ggcagataag cgaaaaatgc
     2521 cataatatcc gcactgttgc tcaatcagaa aggctttata tttaaggagt gcctgtgcta
     2581 gaccgccatc ttcatccccg gattaaaccg ttgttgcatc agtgcgtgcg ggttcttgat
     2641 aaaccgggca ttacgccaga tggtttaaca ttagtgggat ttgccatcgg cgtgctggct
     2701 ctgccgtttc tggcgctggg ctggtatctg gcggcgctag tcgtcatttt gttgaacagg
     2761 ctgcttgatg gtctggacgg tgcgctggcg cggcgcagag agcttaccga cgcgggcggc
     2821 tttcttgata tttctctcga ttttctcttt tacgcgctgg tgccgtttgg ctttattctt
     2881 gctgcaccgg agcaaaatgc gctggcaggc ggctggttgt tgtttgcgtt tatcagcacg
     2941 ggcagcagtt ttctcgcctt tgctgcactg gcagcaaaac atcagattga taaccccggt
     3001 tatgcacata agtcgtttta ctatctgggg ggattaaccg aaggcacaga aacgatctta
     3061 ctgtttgtgc tgggatgttt attccctgca tggtttgcgt ggatcttcgg tgcgttgtgc
     3121 tggatgacga cctttacgcg ggtgtggagt gggtatctga cgctgaagtc gctccagcgt
     3181 cagtaattgc aatgttattt gctactgtcc gggccgcgtt caccggttgc taccggattt
     3241 tttggatcgc tgctccattc gtaccagccg ccgtcataca cggaaacatt cttccaaccc
     3301 atggcgcgtg cgtacataaa ggtttcggac gcgcgccagc cggtgccgca gtagaatgaa
     3361 acttgctgct ctggtttgat attccacgct ttccacatag cggtaatatc atcggcgctg
     3421 cgcatggtgc catccgggtt atgaaaatct tccatatgcg tcgagtcgct accagcgtgt
     3481 ccccaacgtg ctccggctat ttcacctttt ggtttaatat agctgtaacc gctggtcgta
     3541 ccgataaatt ctggccatga acgaatgctc accagcgatg catcctggcg atgcagcagt
     3601 ccacgggcct gttccatatc gagcatcaac tgcggttgtg ccgggatctt cacgccgaaa
     3661 tccggttccg ctttcacttt cggtggcgtt cctcgctcaa caggcagtcc cgcgtcggac
     3721 caggtttgcc agccgccatc cagcagacgc acatctttca cgcctgcgta gagcataatt
     3781 tgcgccacac gcgctccagc gtatacgtca cgcccgtaca gaatgaccgt ggtgtcatgg
     3841 cgaatgccgt gttttgccag catcgctttt agttgttcat cagaaacttt gttccacagc
     3901 ggttcgcttt ccacttcgtt ggtatcgatg tagtcagcac cgggaatatg gctgataagg
     3961 taaagcttag gagcgcccca ggccgcttca atgactttcc agtcaccggc aggtttcgcc
     4021 gtaacctctt taccttgttg caggtcgtgc agccattgcg gataaaccag ctgctcaaag
     4081 tgcggcagtt tttgtagacg ggaaggttcg cttagcgcgt cactcagaat ggagatatgc
     4141 gtaaaacctg ctttttgcag tcgcgttttg acggcgtcga catctttgtc attaccgtac
     4201 agcgccaccg gggcatcggc tttcaggtta tgttgcttga tccacgcgtt gagctgttcg
     4261 gtgctcattt tgtcgagcca gctggcagag aggtttaagg cggcaggttc atgaccagaa
     4321 gggccattta aggtttgtgg ccagccgtta taaaacgcgc tggggcgagt atctatcgct
     4381 ttgccatttt gttgttgaag ctggtcaagt gtaagaggct tcgccagttc agcggcccac
     4441 gaagaagcgc aagccagccc taaagccatt gccagcgcgg tcatttgaga aacacgtttc
     4501 atcgaaaatc ccgacattgt agttttgagt gcgccattct gaactgacgc attgagaaaa
     4561 actttgcgtt atcgcagttt gttgtaattt tctgaccact gcgccatatc cagaacagaa
     4621 ctatcagcag gaacatcctg gagatcgtgc gttacctgaa cgacggggat cgccagttcg
     4681 cgaacttcgc tgaacaccca ctggcgaaaa ttatcgcgca gagccacatc aagacggctg
     4741 aatggctcat ccaggagtaa cgcttttggc tgagcgagaa gggcgcgcag cagggccacc
     4801 cgcgctcgct gaccgcctga taatgtcgca gggtcctggt gataagtttc agccagtccc
     4861 gctcgatcaa gcgcgtcttt cacggcattg cgcctggcag tccccttgag cgtcgacggt
     4921 agcgccagca gtaaattttg cccgacgctg aactggtcaa ataacagtgc atcctggaaa
     4981 agaatgccaa tctgacgctg tgcggtgggt agcatgtcaa tccgttgctc attgagccat
     5041 agctcacctg tacaagaaaa ctgtccagcc agtgcaccaa tcatccatga aaacagagtg
     5101 gattttccac agccagacgg ccccattaac gtgacgatgt cacctttatc aaccgtaaag
     5161 ttaacgtttg tcagcaagcg gctttctggt aaacgtagcg aaacattttt cacgcagagc
     5221 attagcggag tccttgtctg acataaccta cccattttgc gactaacgcg gtcagggcaa
     5281 aaataataag cggtaacaac agttgccata aagcctgggc ggcgagaata ccgttgctgc
     5341 cgccgctgct taatgccacc gcctcagtgg tgagcgtcgg aaaacgcccc gcgcccagcc
     5401 acagcgtcgg catatactgc gcaatactga ctgaaaatcc caccgcgaag gcaatcagca
     5461 cagggcgcaa catgagtgtg catttcacgt aaaagaagat tttggcccgc taccagccca
     5521 gtgtttgtgc aatcaaaatt aaccgtgaat caatgcgctg ccaggcgggt tgcaggataa
     5581 acagcatcca cggcattacc cacagcagat gcccccagac caccgccgtc cagcttccat
     5641 ccaggttcag ccatagcgcc agcgtgtact ggcccgccac cagtggcaga gcgggcaata
     5701 gaatgggcaa ccatagccac aactggcgac gctgtggccc ccattccagc cacagcagta
     5761 acaggagcaa agcgatgaat gttgctacca gccccattgt cagactgttg atgagtgctt
     5821 cactattgat cgtcgactga tccgcgagga tcgccagcag aaccacacac agcacaccgg
     5881 ttaagggtaa aaaactcgcc agcgtagtgc ctggtaataa aggtgtggca ggcttgcgaa
     5941 tgccatctac gcggggaata gtgcgccgcc agctgcgcca tagcagatag ctcagcaaaa
     6001 cgtaggcggc gagtaacagc atcagcagca gactggcgag tgcgcctttc gtttgttgat
     6061 ccgcgtcgcc ctgagttaac cactgccagc taattactgc cagcgtcggt ggattacctg
     6121 gcccaagaat aatcgccaca tccacgaccg aaagcgacca ggcaacaatc gccagcatcg
     6181 ccattgccag cgaaggcgcg acggagggca acagcagcca gttcaggcat tgccagcggc
     6241 tgtagcccag cgaatccagc acaatgacct gctgcaacag ccgtttttcg ctcaatactg
     6301 ccgctaagat ccacagcaga aatgcgcttt ctttcactgc aagggtgagg cccagaccga
     6361 tgccaaatcg gtccattggc ggagtgaaat acgggaaata gtcatatagc agccctccgt
     6421 cagcaaagag cagcagggcg ctggtggcaa aagccacatg gggaatggcg agcagccacg
     6481 gcagacgggc gcacatacgc tgccatttcg gcccaggcca tagcgccaca atcaccagca
     6541 gggcaatcaa caatgccccg accgccgcga tggttgtcga caccagcgtt gccagtaatg
     6601 catgcggtaa ctgtggatcg gcaaataacg cctgccagtg tgtcaacgac aacgcaggcg
     6661 atatcagcgt gagagctgcc gggatcagcg gtgcataaat caccgccacc atcgcccaca
     6721 gcaaaaagat taatgcgtac cgtaacggcg taaccattct tgttccagtg cattcaccca
     6781 tcctgcgtgc ggttcagcca gtaccggcgg cagatcctgc ggcattcttg attgcaatat
     6841 ttcgcgctgc ccgtcaggca gtttttgcgg atcgagaaca gaaggatcgt cccagacaac
     6901 gggatctgct ttacgcagtt gcgcatcggg tgagagcaga aaattggcaa ctaccttcgc
     6961 cgcagcactg gcattcgcgt tggctggaat ggtgacgaaa tgcacgttgc caatcatccc
     7021 ctcgcgaaag ccaaaactgt aactgcttgc cggcaaatcg ccgctggcga ttttttgctg
     7081 cgcatgcgcg gggttaaagg tcagcgacag gcgcaatgtg ccggctttca gcagagcatc
     7141 catccgcgcg ggcgaaggcg ggaaatcctt tccttcgcgc cacaaatacg gatgcagtgc
     7201 atcaagatat tgccacaagg gcgcagtgac acgggcgaaa gtcgcatcgt ccggcgcttc
     7261 ttttaatgcg gcgggatctg gcgtcagcat aatcagcaac tgttcaagaa acgccgtgcc
     7321 ggtaaagtcc ggtgggcgcg gataagtaac cgtgccggga ttggctttag caaactccag
     7381 taaggcttgc ggcgtttgtg gtggctgtgg cgtaacatcg cggcgggcga taaacgtcag
     7441 ttgtgcgccg ccccagggcg attccgcacc ttgtgtcggc actgaaaaat cttcccgcac
     7501 cggcagctgt gtgtcgacat agcgccagtt gggcagagtc tccgcccagc ccgtttgtaa
     7561 taaattggcc tcttttaagg tgcggaagtt ttcgccgttc acccagagca gatccaccga
     7621 gccgcccgtt ttacgaccgg cagcagcttc ggtctgaatg cgcttcaccg cgtctgcggc
     7681 atccgcgaga cgaacaatct tcaggtttat agcgtaatgg gttttcatct cgccgctaac
     7741 ccagtcgaga tagcggttaa ttgcggtatc gccgccccag gcgttaaacc agacggtttg
     7801 ccctttggcc tcatttttaa tttcctgcca gtcactggca tgtgttgcca aagaaaacag
     7861 cgataacaat cccagcaacc acccacaatg gcgcatcttc tctccttaag aacgtttttc
     7921 cggaatacgg cacagcccct gagcgggaat gtccatggca gaattaaaac gagccgacag
     7981 gttttgcagg ccgatcaatg ccgtcagttc ggtgagcgcc tgagcgtcaa aatgcgcagc
     8041 cagtcgggta cgcagggcat catcgactgt tggcggtgtg acgcttgcgg cttcggcgta
     8101 ctccagcgcc agccgttctt catcgctaaa gagcgggctt tgccgccagt cagccactgc
     8161 cagcagttta tcggtgctgc cggtacgctc ggcgactttc atactggtga tatccacaca
     8221 aaactcacac aggcacattt gcgcaatgcg cgcgctgaca agcgatcgca ctaccggatc
     8281 gagcggtgag cgtttgcgct ccagccaccc aacaaacatt gacaccaaat aaaagataaa
     8341 cgggatccgc ccccaccagc gaatcgggct tagcacctcg ccgtaatggc gacgatgcag
     8401 ccacgcctgc ggacgtaaaa tgaaaggaat tttgctaagc ggcggtaaac ccatcagtca
     8461 ttcctcttct ggcgctcaag ccatattttc ttcgccataa aaatcaccac ggtcagggca
     8521 aacagaataa acagtccggt gacaaaccag aaagtaccgc ctgttaacat gctgcccgcc
     8581 caggaataaa caatagtcgc cggtaattga ccaagcccgg tggagataaa aaacgagcga
     8641 aaacgtattg aagtcagacc ggcagcatag ctgattggat cgaaagggac aaaaggcaat
     8701 aaccgacaga ccaggatggt gtgtttgccg tagcgagtga aaaagccgtc catactgtca
     8761 agcacggttt tgccggttaa tttttccacc acttcgcggc ccatcactct ggcgataaaa
     8821 aagcacagcg ccgcgccggc catcgaactg gtccacgaca gcaagccgcc ccagaacgcg
     8881 ccaaacagcg acgcattggc aaaggtgatc aaaaacgcag gtagcggtgc agcaatggcc
     8941 tgtaaaatca tcaacaagaa cgagacaact gccgccagtg cgccgtaaga ctgaataaag
     9001 cgttctatac cctgttggtc cacggcggca aacgccgcaa cgctgcgatt gataaactca
     9061 tggacgccgg gaagcagcgc ccatgcgagc agcatagcga acaacaggat gatgagggtt
     9121 atacagtagt accagatttt acgcgattgc atcttcatca tcctttatcc tggctttatt
     9181 cggtgatttt aaaggtaacc gttgccagcg tgttatccgc cgggagaact gaggcattgc
     9241 ctttgaattt cacttcgccg cgtttttcca ccgcaccata agtgtatgtt gcattgctga
     9301 cgatgccgac cgggcagcta tccagacaca ccagtcaacc cgttttcttc tcttctgctg
     9361 ccgttaaatt accgccaaag cgcatgtcca gtttcttgcc attactgtca acaatcactt
     9421 catcgaagga atacgctttt gccgcccctt gccagttgac cgaaatatcc agtttgctgc
     9481 ctgtgacatg agtcgtttct ttattatcca tcgtcatgtt ttcgcccggc gtaccacctg
     9541 cctctttcag ggcttcataa aatgctttcg gggtcgcata agccataaac agcgatttat
     9601 gtccgttgga gccatcttta aacacaatac cgtgacgagt gtcgtcggtg aggaaacgac
     9661 cattaatttg caccagcatg gttaccgtat ggttattggc atcgacgcgc agcggttggc
     9721 tgttcgaaag tccgtcgtat tccacttttg ccgccgaatt ctctttttga tcgcagccgc
     9781 taagcccggc aacagccagt aagcagagtg cagccagtcc ttttttccat gacactgaat
     9841 aatgttgcga catcgttcta tccttcattt tttgggtgag taagcgggct gcggcgcgaa
     9901 gcagacagat ccacatgttt gtgtcgggcg tagagttttg cgagctggac gagaataaac
     9961 agcgccaggc ccgccagaca gagttgtaaa ataaagcgc
//
LOCUS       DADMJE010000155         9985 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.158, whole genome shotgun sequence.
ACCESSION   DADMJE010000155 DADMJE010000000
VERSION     DADMJE010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9985
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.158"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            289..486
                     /locus_tag="JN001_003390"
     CDS             289..486
                     /locus_tag="JN001_003390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054512.1"
                     /translation="MEITPQQLVEFTIPDGRGQQARTLPDMLSSDAGPLSYPLIYSSK
                     VMIISLFDSTVMPDKYRHNGK"
     gene            complement(436..1629)
                     /locus_tag="JN001_003391"
     CDS             complement(436..1629)
                     /locus_tag="JN001_003391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054513.1"
                     /translation="MSPGIEDTPQKTLSCWPLAFSAGLLGIGQNGLLVVLPVLVIQTN
                     LSLSVWAALLMLGSMLFLPSSPWWGKQISRTGSKPVVLWALGGYGISFTLLGLGSVLM
                     ATSAITTAVGLGILIIARIAYGLTVSAMVPACQVWALQRAGEGNRMAALATISSGLSC
                     GRLFGPLCAAAMLAIHPLAPLGLLMAAPVLALLMLLRLPGTPPQPTPECKSVSLKRDC
                     LPYLLCAILLAAAVSMMQLGLSPALTRQFVTDTTAISQQVAWLLGLSAVAALIAQFGV
                     VRPQRLTPVALLLSAGVLMSGGLAIMLSEQLWLFYPGCAVLSFGAALATPAYQLLLND
                     KLADGAGAGWLATSHTLGYGLCALLVPLVSKTGVAIALIMAALFATILFTIVSVFIWH
                     YRTIK"
     gene            1765..3489
                     /gene="iucA"
                     /locus_tag="JN001_003392"
     CDS             1765..3489
                     /gene="iucA"
                     /locus_tag="JN001_003392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001314127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucA"
                     /protein_id="HAY9054514.1"
                     /translation="MTLPSEKPATDVAAQCFLNALIRETTDWKLTEYPPDELLIPLDE
                     QKSLHFRVAYFSPTQHHRFAFPARLVTASGSYPVDFTTLSRLIIDKLRHQLFLPVPLC
                     ETFHQRVLESHVHTQQAIDARHDWAALREKALNFGEAEQALLTGHAFHPAPKSHEPFN
                     RREAERYLPDMAPHFPLRWFSVDKTQIAGESLHLNLQQRLTRFAAENAPQLLNELSDN
                     QWLFPLHPWQGEYLLQQGWCQALVAKGLIKDLGEAGTSWLPTTSSRSLYCATSRDMIK
                     FSLSVRLTNSIRTLSVKEVKRGMRLARLAQTDGWQMLQVRFPTFRVMQEDGWAGLLDL
                     NGNIMQESLFALRENLLVDQPKSQTNVLVSLTQAAPDGGDSLLVSAVKRLSDRLGITV
                     QQAAHAWVDAYCQQVLKPLFTAEADYGLVLLAHQQNILVQMLGDLPVGFIYRDCQGSA
                     FMPHATDWLDSIGEAQAENIFTHEQLLRYFPYYLLVNSTFAVTAALGAAGLDSESNLM
                     ARVRASLAEVRDQVTHKTCLNYVLESPYWNVKGNFFCYLNDHNENTIVDPSVIYFDFA
                     NPLQAQEV"
     gene            3490..4437
                     /gene="iucB"
                     /locus_tag="JN001_003393"
     CDS             3490..4437
                     /gene="iucB"
                     /locus_tag="JN001_003393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N(6)-hydroxylysine O-acetyltransferase"
                     /protein_id="HAY9054515.1"
                     /translation="MSEANIIHSRYGLRCEKLDKPLNLGWGLDNSAVLHCPGELPTGW
                     LCDALDQIFIAAPQLSAVALPWAEWREEPQALTLFGQVKSDIIHRTAFWQLPLWLSSP
                     ANRASGEMVFDAEREIYFPQRPPRPQGEVYRRYDPRIRRMLSFRIADPVSDAERFTRW
                     MNDPRVEYFWEQSGSLEVQTAYLERQLTGKHAFPLIGCFDDRPFSYFEIYWAAEDRIG
                     RHYSWQPFDRGLHLLVGEQQWRGAHYVQSWLRGLTHYLLLDEPRTQRTVLEPRTDNQR
                     LFRHLEPAGYRTIKEFDFPHKRSRMVMADRHHFFTEVGL"
     gene            4437..6179
                     /gene="iucC"
                     /locus_tag="JN001_003394"
     CDS             4437..6179
                     /gene="iucC"
                     /locus_tag="JN001_003394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobactin synthase IucC"
                     /protein_id="HAY9054516.1"
                     /translation="MNHKDWDFVNRRLVAKMLSEMEYEQVFHAESQGDDHYCINLPGA
                     QWRFIAERGIWGWLWIDAQTLRCTDEPVLAQTLLMQLKPVLSMSDATVAEHMQDLYAT
                     LLGDLQLLKARRGLSASDLINLDADRLQCLLSGHPKFVFNKGRRGWGKEALERYAPEY
                     TNTFRLHWLAVKREHMIWRCDNDLDIQQLLTAAMDPQEFTRFSQVWQENGLDHNWLPL
                     PVHPWQWQQKIATDFIADFVEGRMVSLGEFGDQWLAQQSLRTLTNASRRGGLDIKLPL
                     TIYNTSCYRGIPGRYIAAGPLASRWLQQVFATDATLVQSGAVILGEPAAGYVSHEGYA
                     ALARAPYRYQEMLGVIWRENPCRWLKPDESPVLMATLMECDENNQPLAGAYIDRSGLD
                     AETWLTQLFRVVVVPLYHLLCRYGVALIAHGQNITLAMKEGVPQRVLLKDFQGDMRLV
                     KEAFPEMDSLPQEVRDATSRLSADYLIHDLQTGHFVTVLRFISPLMVRLGVPERRFYQ
                     LLAAVLSDYMNKHPQMAERFALFSLFRPQIIRVVLNPVKLTWPDLDGGSRMLPNYLEN
                     LQNPLWLVTQEYES"
     gene            6176..7513
                     /gene="iucD"
                     /locus_tag="JN001_003395"
     CDS             6176..7513
                     /gene="iucD"
                     /locus_tag="JN001_003395"
                     /EC_number="1.14.13.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent L-lysine N(6)-monooxygenase"
                     /protein_id="HAY9054517.1"
                     /translation="MKKSVDFIGVGTGPFNLSIAALSHQIEELNCLFFDEHPHFSWHP
                     GMLVPDCHMQTVFLKDLVSAVAPTNPYSFVNYLVKHKKFYRFLTSRLRTVSREEFSDY
                     LRWAAEDMNNLYFSHTVENIDFDKKSRLFLVQTSRGEYFARNICLGTGKQPYLPPCVK
                     HVTQSCFHASEMNLRRPDLSGKRITVVGGGQSGADLFLNALRGEWGEAAEINWVSRRN
                     NFNALDEAAFADEYFTPEYISGFSGLKEDIRHQLLDEQKMTSDGITADSLLTIYRELY
                     HRFEVLRKPRNIRLLPSRSVITLESSGPGWRLLMEHHLDQGRESLESDVVIFATGYRS
                     ALPQILPSLMPLITMHDKNTFKVRDDFTLEWSGPKENNIFAVNASMQTHGIAEPQLSL
                     MAWRSARILNRVLGRDLFDLSMPPALIQWRSGSRKKPQPEAASLTHYTANIQE"
     gene            7519..9714
                     /gene="iutA"
                     /locus_tag="JN001_003396"
     CDS             7519..9714
                     /gene="iutA"
                     /locus_tag="JN001_003396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709458.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric aerobactin receptor IutA"
                     /protein_id="HAY9054518.1"
                     /translation="MRKKYMPRALGPLLLVVLSPAVAQQNDDNEIIVSASRSNRTVAE
                     MAQTTWVIENAELEQQIQGGKELKDALAQLIPGLDVSSQSRTNYGMNMRGRPLVVLID
                     GVRLNSSRSDSRQLDSVDPFNIDHIEVISGATALYGGGSTGGLINIVTKKGQPETMME
                     FEAGTKSGFNSSKDHDERIAGAVSGGNDHISGRLSVAYQKFGGWFDGNGDATLLDNTQ
                     TGLQHSNRLDIMGTGTLNIDESRQLQLITQYYKSQGDDNYGLNLGKGFSAISGSSTPY
                     VSKGLNSDRIPGTERHLISLQYSDSDFLGQELVGQVYYRDESLRYYPFPTVNANKQAT
                     AFSSSQQDTDQYGMKLTLNSQLMDGWQITWGLDAEHERFTSNQMFFDLAQASASGGLN
                     NHKIYTTGRYPSYDITNLAAFLQSSYDINDIFTVSGGVRYQYTENRVDDFIDYTQQQK
                     IAAGKAISADAIPGGSVDYDNFLFNAGLLMHITERQQAWFNFSQGVALPDPGKYYGRG
                     IYGAAVNGHLSLTKSVNVSDSKLEGVKVDSYELGWRFTGDNLRTQIAAYYSLSNKSVE
                     RNKDLTISVKDDRRRIYGVEGAVDYLIPDTDWSTGVNFNVLKTESKVNGQWQKYDVKE
                     SSPSKATAYINWAPEPWSLRVQSTTSFDVSDAEGNDINGYTTVDFISSWQLPVGTLSF
                     SVENLFDRDYTTVWGQRAPLYYSPGYGPASLYDYKGRGRTFGLNYSVLF"
BASE COUNT         2400 a         2570 c         2655 g         2360 t
ORIGIN      
        1 tgtctggaga ttcagggggc cagtctactt cataaaaaac atgtcagtga aaaagaaacc
       61 tggcgttggg ttgaaggata taataaagca acagaactgg ctcgccaatg ccctgatacc
      121 catgtattgt caatttctga tcgtgaaggc gatttttatg acctgtttga acgcgcagag
      181 cagactcccg gaataaaagc tgactggctt gtcagaatga aatttaataa cagagcaacg
      241 ctgaatatta atggtaaacg ggatcatagg ttgttgcacg aaagaatcat ggagattaca
      301 ccgcagcaac tggttgaatt cactatacct gatgggcggg ggcagcaagc cagaacactg
      361 cctgacatgc tttcatcaga cgcaggtcct ctctcatatc ctctgattta ctccagtaag
      421 gtgatgatca tatctttatt tgatagtacg gtaatgccag ataaatacag acacaatggt
      481 aaataatata gttgcaaata atgctgccat aatcagcgcg attgcgacac ctgttttcga
      541 taccagcggc accagcaaag cgcacagtcc atagccaagt gtgtgactgg tagcgagcca
      601 gcccgcgcct gcgccatcag ccagcttatc attcagtaga agttgataag cgggtgttgc
      661 cagagctgct ccaaatgaca gcactgcaca gcccgggtaa aacaaccata gctgttcgga
      721 gagcatgata gccagaccac cactcatcaa cactccggca ctcaggagca gggccaccgg
      781 agtcaggcgc tgcggacgga ctaccccgaa ctgcgcgata agcgcagcta ctgcggacag
      841 acccaacagc caggccacct gttggctaat ggcggtggta tccgtgacga actggcgagt
      901 aagggcaggc gaaagtccaa gctgcatcat gctcaccgcc gcagccagta atattgcgca
      961 aagcagataa ggcagacaat cccgcttcag actgacgctc ttgcactccg gtgtgggctg
     1021 tggtggtgtg ccgggcaacc gcagcagcat cagcagcgcc agcactggtg ctgccatcag
     1081 tagccccagt ggcgccagag gatgaatggc cagcattgct gccgcgcaca gcggcccgaa
     1141 tagcctgccg caactcaggc cggagctgat ggttgccaga gcggccatgc gattcccttc
     1201 tccagctctc tgcaatgccc agacctgaca ggctggcacc attgccgaca cggtcagccc
     1261 gtaggcgatc cgggcgatga ttaatattcc cagtcccacc gctgttgtta tggcgctggt
     1321 agccatcagc acgcttccca gccctagcag ggtaaagctt atgccatatc ctcccagagc
     1381 ccacaacacc acaggtttac tgccagtacg ggaaatttgc tttccccacc acggggacga
     1441 tggcagaaac agcattgagc caagcatcag cagggcagcc catacagaca gactcagatt
     1501 tgtctgtatg accagaacag ggagcacaac cagcagaccg ttctgtccga taccgagaag
     1561 cccggcactg aacgcaagtg gccagcagga cagtgttttt tggggcgtat cttcgatccc
     1621 tggtgacatt ataatgcttc aactccatgt attaattgtg tttatttgta aaattaattt
     1681 atctgacaat aacatttatt gttgataatg agaatcatta tcgacataat tgttattatt
     1741 ttactgtgtg ggagctgttt gactatgacc ctgccctctg aaaaaccagc cacagatgtg
     1801 gctgcgcagt gcttcctgaa tgcactgatt cgtgaaacca cagactggaa actgacagaa
     1861 tacccgccag acgaattgct catcccgctg gatgagcaga aatcgctcca tttcagagtg
     1921 gcttatttct ccccaaccca gcatcaccgc tttgcatttc ctgcacgtct ggtcacggca
     1981 tcaggcagtt atcctgtcga ctttaccact ctctcccggc ttattattga taagctacgc
     2041 catcaactgt ttctgcccgt tcccctctgc gaaactttcc accagcgcgt gctggaaagc
     2101 catgtccata cgcaacaggc aattgatgcc cgtcatgact gggccgctct gcgtgaaaaa
     2161 gcgttgaatt ttggcgaggc tgagcaggcg ctgctgacag gacacgcttt ccaccctgcg
     2221 cctaagtctc atgaaccgtt taaccggcgg gaggctgaac gctacctgcc tgatatggca
     2281 ccccacttcc cactgcggtg gttttcggtg gataaaacgc aaatcgccgg tgaaagtttg
     2341 catctcaacc ttcaacagcg gctgacgcga tttgccgcag agaatgcgcc tcagttactc
     2401 aacgaattaa gtgacaacca atggctgttc ccgttgcacc cgtggcaggg ggaatatctt
     2461 ttgcagcagg ggtggtgcca ggcacttgtt gctaaagggc tgattaaaga cttaggtgag
     2521 gccggcacgt cgtggctgcc gaccacctct tcccgttccc tctactgtgc caccagccgc
     2581 gatatgatca agttctccct gagcgtacgg ctgaccaact ccatccgtac tctgtccgtg
     2641 aaagaagtga agcgtgggat gcgcctggca cgcctggctc aaaccgacgg ctggcagatg
     2701 ctacaggtcc gcttcccgac tttccgggta atgcaggagg atggctgggc cgggctgctc
     2761 gatcttaacg gcaacatcat gcaggaaagt ctgtttgccc tgcgtgaaaa tctgctggtg
     2821 gatcagccga aaagccagac taacgtactg gtctccctga ctcaggccgc acctgatggc
     2881 ggtgattcgc tgctggtttc ggcggtaaaa cgcctgagcg atcgcctcgg tatcactgtg
     2941 caacaggccg cccatgcatg ggtcgatgca tactgtcagc aagtgctaaa gccgctgttt
     3001 acggctgaag cggattacgg cctggtgctg ctggcgcatc agcaaaatat tcttgtccag
     3061 atgcttgggg atctgccggt cggatttatt taccgtgact gtcagggcag cgcttttatg
     3121 cctcacgcga cagactggct cgattctatt ggcgaggcgc aggcggaaaa tattttcacc
     3181 catgagcagt tgctgcgcta tttcccttat tacctgctgg ttaactccac ttttgctgtg
     3241 accgctgcgc tgggggctgc cgggctggac agcgaatcga atctgatggc tcgtgtacga
     3301 gcatcgctgg ctgaagtgcg tgatcaggtg actcataaaa cctgtctcaa ctacgtgctg
     3361 gaaagtccgt actggaacgt aaaaggtaac tttttctgtt atctgaacga tcataacgag
     3421 aacaccattg ttgacccttc ggtgatctat ttcgatttcg ctaacccgct gcaggctcag
     3481 gaggtctgaa tgtctgaggc aaacattatt cacagcagat atggactgcg ctgtgaaaaa
     3541 ctcgacaagc ccctgaatct tggctgggga ctggacaata gcgcggtgtt gcactgtccc
     3601 ggggagctgc cgacagggtg gctgtgcgat gcgctggatc agatatttat cgccgcacca
     3661 caactgtcag cagtggctct cccctgggcc gaatggcgtg aggagccaca ggcgctgacg
     3721 ctttttgggc aggtaaaaag cgacattatc catcgtactg ccttctggca gttaccgtta
     3781 tggttgagtt caccggcaaa ccgggcctcc ggtgaaatgg tttttgatgc agagcgtgag
     3841 atttatttcc cgcagcgccc accccgtcca cagggtgagg tttaccgccg ttacgatcca
     3901 cgtattcgca ggatgctgag tttccgcatt gccgatcccg tttctgatgc agaacgtttc
     3961 acccgctgga tgaatgatcc gcgcgttgag tatttctggg agcaaagtgg ctcactggag
     4021 gtacagaccg cctatctgga gcgccagctc accggtaaac atgcattccc gctgattggg
     4081 tgcttcgacg atcggccatt cagctatttc gaaatctact gggcggcgga agaccgcatt
     4141 ggtcgtcact attcgtggca gccctttgac cgtggcctgc atctgctggt tggtgaacag
     4201 caatggcgcg gggcccacta tgtgcaaagc tggctgcgcg ggctgacaca ttacctgctg
     4261 ctggatgagc cccgtacgca gcgcacagta ctggagccac gcaccgataa ccagcgcctg
     4321 ttccgccatc ttgagcctgc gggataccgg acaattaaag agttcgactt cccacataag
     4381 cgctcgcgca tggtgatggc ggatcgtcat cacttcttca cggaggtcgg tctgtaatga
     4441 atcacaagga ctgggatttt gttaaccgtc ggctggtggc aaaaatgttg tctgagatgg
     4501 agtatgagca ggttttccac gcggaatctc agggcgatga ccactactgc attaacctgc
     4561 cgggagcaca atggcgcttc atcgctgaac gtggtatctg gggctggctg tggattgatg
     4621 cccaaacgtt gcgctgcacg gacgaaccag tactggcgca gacgctgctg atgcagctaa
     4681 agccggtgct gtcaatgagt gatgccactg ttgcagagca tatgcaggat ttgtatgcca
     4741 cgctactggg cgacctgcaa ctgctgaagg cccgtcgcgg actgagtgcc agtgacctga
     4801 ttaatcttga tgccgatcgt ctgcaatgcc tgctgagcgg tcatcctaaa ttcgttttta
     4861 ataaaggtcg ccgtggctgg ggcaaagagg cgctggaacg atatgcgcca gagtatacca
     4921 acaccttcag actgcactgg ctggcggtaa aacgtgaaca tatgatctgg cgctgcgata
     4981 acgatctgga tattcagcag ttgttgactg ccgcaatgga tccgcaggag tttacacgct
     5041 tcagtcaggt ctggcaggaa aacgggctgg atcacaactg gctaccgctg ccggtacatc
     5101 cgtggcagtg gcagcaaaaa atcgccacag acttcatcgc tgattttgtc gaaggcagga
     5161 tggtgtctct cggcgagttt ggcgaccagt ggctcgccca gcagtcgctg cgtaccctga
     5221 ccaacgccag ccgccgggga gggctggata tcaagctgcc gctgaccatc tacaacacct
     5281 catgctaccg ggggatccct ggcagatata tcgctgccgg accactggct tcacgctggc
     5341 tgcaacaggt ttttgcgacc gacgccaccc tggtgcaaag cggcgcagtg atccttggtg
     5401 aaccggcggc aggctatgtg tcccatgaag gctatgccgc gcttgcccgg gctccctatc
     5461 gctaccagga aatgcttggt gttatctggc gggagaatcc gtgccgctgg ctgaaaccgg
     5521 atgaaagtcc tgttctgatg gcaacactga tggagtgcga cgaaaacaat cagccgctgg
     5581 caggcgcata tatcgaccgc tccggactgg acgctgaaac ctggcttacg caattgttcc
     5641 gggtggttgt ggttccgctg tatcacctgc tttgccgcta cggtgtcgcg cttattgcac
     5701 acggacaaaa tataacgctc gccatgaaag agggggtacc acagcgtgtt ctgctgaaag
     5761 acttccaggg cgatatgcgg ctggtgaaag aagcgtttcc cgaaatggat tctttgcctc
     5821 aggaggtgcg tgatgccaca tcccgtctga gtgcggacta cttaatccat gatttgcaga
     5881 cgggtcactt cgtgacagta ctgcgtttta tttcgccact gatggttcgt cttggcgtac
     5941 ctgaaaggcg attttatcaa ctgctggcag cagtgttgag tgattacatg aacaaacatc
     6001 cacaaatggc agagcgtttt gcgcttttct cactcttcag gccacaaatc attcgcgtgg
     6061 tgctgaaccc ggtaaaactg acctggccgg acctggatgg cggcagtcgc atgctgccga
     6121 attaccttga gaatctgcaa aatccgctgt ggctggtaac tcaggaatat gaatcatgaa
     6181 aaaaagtgtc gattttattg gtgtcgggac agggccattt aatctcagca ttgctgcatt
     6241 gtcacatcag atcgaagaac tgaactgtct cttctttgac gaacatcctc atttttcctg
     6301 gcatccgggt atgctggtac cggattgtca tatgcagacc gtctttctga aagatctggt
     6361 cagtgcagtt gcacctacaa atccctacag ctttgttaac tatctggtga agcacaaaaa
     6421 gttctatcgc ttccttacaa gcaggctacg tacagtatcc cgtgaagagt tttctgacta
     6481 tctccgctgg gctgctgaag atatgaataa cctgtatttc agtcataccg ttgaaaatat
     6541 tgatttcgac aaaaaaagtc gattgtttct ggttcagacc agtcggggag aatattttgc
     6601 ccgcaatatc tgccttggta caggaaaaca accttattta ccaccctgtg tgaagcatgt
     6661 gacacaatcc tgtttccatg ccagtgaaat gaatcttcgt cggccggacc tgagtggaaa
     6721 acggataacc gtggttggtg gaggacagag tggtgcagac ctgttcctta atgcattacg
     6781 cggggaatgg ggagaagcgg cggaaataaa ctgggtctca cggcgtaata attttaacgc
     6841 actggatgag gctgcttttg ctgatgagta ttttacacct gaatatattt caggcttctc
     6901 cggactgaag gaagatattc gccatcagtt actggatgag cagaaaatga catcggatgg
     6961 catcactgcc gattctttac tgaccattta tcgtgagttg taccaccgtt ttgaagttct
     7021 gagaaaacca agaaatatcc gtctgctacc cagtcgctcg gtaataactc tggaaagtag
     7081 tggtccgggc tggaggttat tgatggaaca tcatctggat cagggcagag agagcctgga
     7141 aagtgatgtg gtgattttcg ccacaggtta ccgttctgca ttgccacaaa tacttccctc
     7201 actgatgccc ttgatcacca tgcacgataa gaacaccttt aaagtgcgtg atgacttcac
     7261 tctggaatgg agtggcccga aagaaaataa catctttgcg gtcaacgcca gcatgcaaac
     7321 tcatggcatc gccgaacccc agctcagcct gatggcctgg cgatctgcac gtattcttaa
     7381 tcgcgtactg gggcgtgatt tattcgatct cagtatgccg cccgcactga ttcagtggcg
     7441 cagcggcagc cggaaaaaac cgcagccgga ggctgcttct ttaactcact atacagcaaa
     7501 tattcaggaa taacgatgat gcgcaaaaag tatatgcccc gggctcttgg tccgctgctt
     7561 cttgtcgtgc tgtcaccagc tgtcgcccag caaaacgatg ataatgagat catagtgtct
     7621 gccagccgca gcaatcgaac tgtagcggag atggcgcaaa ccacttgggt tatcgaaaat
     7681 gccgaactgg agcagcagat tcagggcggt aaagagctga aagacgcact ggctcagtta
     7741 atccccggcc ttgatgtcag cagccagagt cgaaccaact acggtatgaa catgcgtggc
     7801 cgcccgctgg ttgtcctgat tgacggtgtg cgcctcaact cttcacgttc cgacagccga
     7861 caactggact ctgtcgatcc ttttaatatc gaccatattg aagtgatctc cggcgcgacg
     7921 gccctgtacg gtggcgggag taccggaggg ttgatcaaca tcgtgaccaa aaaaggtcag
     7981 ccggaaacca tgatggagtt tgaggctggc acaaaaagtg gctttaacag cagtaaagat
     8041 cacgatgagc gcattgccgg tgctgtctcc ggcggaaatg accatatctc cggacgtctt
     8101 tccgtggcat atcagaaatt tggcggctgg tttgacggta acggcgatgc caccctgctt
     8161 gataacaccc agaccggcct gcagcactcc aatcggctgg acatcatggg aaccggtacg
     8221 ctgaacatcg atgaatcccg gcagcttcaa ctgataacgc agtactataa aagtcaggga
     8281 gacgacaatt acgggcttaa tctcgggaaa ggcttttccg ccatcagcgg gagcagcaca
     8341 ccatacgtca gtaaggggct gaattctgac cgcattcccg gcactgagcg gcatttgatc
     8401 agcctgcagt actctgacag tgatttcctg ggacaggaac tggtcggtca ggtttactac
     8461 cgcgatgagt cgttgcggta ctacccgttc ccgacggtaa atgcgaataa acaggcgacg
     8521 gctttctcct cgtcacagca ggataccgac cagtacggca tgaaactgac tctgaacagc
     8581 caactgatgg acggctggca aatcacctgg gggctggatg ctgagcatga gcgctttacc
     8641 tccaaccaga tgttcttcga tctggctcag gcaagtgctt ccggagggct gaacaaccat
     8701 aagatttaca ccaccgggcg ctatccgtca tatgacatca ccaatctggc ggccttcctg
     8761 caatccagct atgacattaa tgatattttt accgttagcg gtggcgtacg ctatcagtat
     8821 actgagaaca gggtagatga tttcatcgac tacacgcagc aacagaagat tgctgccggg
     8881 aaggcgatat ctgccgacgc cattcctggt ggttcggtag attacgataa ctttctgttc
     8941 aatgctggtc tgctgatgca catcaccgaa cgtcagcagg catggttcaa tttttcccag
     9001 ggggtggcat tgccggatcc ggggaaatat tatggtcgcg gcatctatgg tgcagcagtg
     9061 aacggccatc tttccctgac aaagagcgtg aacgtcagcg acagtaagct ggaaggcgtg
     9121 aaagtcgatt cttatgaact gggctggcgc tttaccggtg acaacctgcg gactcaaatc
     9181 gcggcatatt actcgctttc caataagagc gtggaaagga ataaagatct gaccatcagt
     9241 gtgaaggacg acaggcgccg tatttacggc gtggaaggtg cggtggacta cctgatcccg
     9301 gatactgact ggagtaccgg tgtgaacttc aatgtgctga aaaccgagtc gaaagtgaac
     9361 ggtcaatggc aaaaatatga cgtgaaggaa tcaagtccat cgaaagcgac agcttacatt
     9421 aactgggcgc cggaaccgtg gagtctgcgt gtacagagca ccacttcttt cgacgtaagc
     9481 gatgcagagg gtaacgatat taatggttac actaccgtcg attttatcag tagttggcag
     9541 cttccggtgg gaacactcag cttcagcgtt gagaacctct tcgaccgtga ctataccact
     9601 gtctggggac agcgtgcacc tctgtactac agcccgggtt acggccctgc ttcactgtac
     9661 gactacaaag gccggggccg aacctttggt ctgaactact cagtgctgtt ctgacgggga
     9721 tgcttttgca acaagggtat gctgtaaaca acatggtcct tggtggccat gttgtttaca
     9781 gccagtataa tatacagcct taacaagata ttccgtctcc ggaatggact gttcaccact
     9841 gaataacatt atttctgttt tatggatctt tgactgaaat ttatcgcata tcctcatttc
     9901 attgtccgtc tgaaaactaa ccttacaagt aagcgtcgtc tcagcaccgt ctggcagatc
     9961 ctgaaattcc tgagaggatg atctg
//
LOCUS       DADMJE010000156         9895 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.159, whole genome shotgun sequence.
ACCESSION   DADMJE010000156 DADMJE010000000
VERSION     DADMJE010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9895)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9895)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9895
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.159"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JN001_003397"
     CDS             complement(55..1338)
                     /gene="aroA"
                     /locus_tag="JN001_003397"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HAY9054519.1"
                     /translation="MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNL
                     LDSDDVRHMLNALTALGVSYTLSADRTRCEIIGNGGPLHAEGALELFLGNAGTAMRPL
                     AAALCLGSNDIVLTGEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGG
                     NVDVDGSVSSQFLTALLMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQ
                     HYQQFVVKGGQSYQSPGTYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRF
                     ADVLEKMGATICWGDDYISCTRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNI
                     YNWRVKETDRLFAMATELRKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFS
                     LVALSDTPVTILDPKCTAKTFPDYFEQLARISQAA"
     gene            complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JN001_003398"
     CDS             complement(1409..2497)
                     /gene="serC"
                     /locus_tag="JN001_003398"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000057138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HAY9054520.1"
                     /translation="MAQIFNFSSGPAMLPAEVLKQAQQELRDWNGLGTSVMEVSHRGK
                     EFIQVAEEAEKDFRDLLNVPSNYKVLFCHGGGRGQFAAVPLNILGDKTTADYVDAGYW
                     AASAIKEAKKYCTPNVFDAKVTVDGLRAVKPMREWQLSDNAAYMHYCPNETIDGIAID
                     ETPDFGKDVVVAADFSSTILSRPIDVSRYGVIYAGAQKNIGPAGLTIVIVREDLLGKA
                     NIACPSILDYSIFNDNGSMFNTPPTFAWYLSGLVFKWLKANGGVAEMDKINQQKAELL
                     YGVIDNSDFYRNDVAKANRSRMNVPFQLADSALDKLFLEESFAAGLHALKGHRVVGGM
                     RASIYNAMPLEGVKALTDFMVEFERRHG"
     gene            complement(2696..3388)
                     /locus_tag="JN001_003399"
     CDS             complement(2696..3388)
                     /locus_tag="JN001_003399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF421 domain-containing protein"
                     /protein_id="HAY9054521.1"
                     /translation="MKAFDLHRMAFDKVPFDFLGEVALRSLYTFVLVFLFLKMTGRRG
                     VRQMSLFEVLIILTLGSAAGDVAFYDDVPMVPVLIVFITLALLYRLVMWLMAHSEKLE
                     DLLEGKPVVIIEDGELAWSKLNNSNMTEFEFFMELRLRGVEQLGQVRLAILETNGQIS
                     VYFFEDDKVKPGLLILPSDCTQRYKVVPESADYACIRCSEIIHMKAGEKQLCPRCANP
                     EWTKASRAKRVT"
     gene            3518..5278
                     /locus_tag="JN001_003400"
     CDS             3518..5278
                     /locus_tag="JN001_003400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415425.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     accessory protein YcaO"
                     /protein_id="HAY9054522.1"
                     /translation="MTQTFIPGKDAALEDSIARFQQKLSDLGFQIEEASWLNPVPNVW
                     SVHIRDKECALCFTNGKGATKKAALASALGEYFERLSTNYFFADFWLGETIANGPFVH
                     YPNEKWFPLTENDDVPEGLLDDRLRAFYDPENELTGSMLIDLQSGNEDRGICGLPFTR
                     QSDNQTVYIPMNIIGNLYVSNGMSAGNTRNEARVQGLSEVFERYVKNRIIAESISLPE
                     IPADVLARYPAVVEAIETLEAEGFPIFAYDGSLGGQYPVICVVLFNPANGTCFASFGA
                     HPDFGVALERTVTELLQGRGLKDLDVFTPPTFDDEEVAEHTNLETHFIDSSGLISWDL
                     FKQDADYPFVDWNFSGTTEEEFATLMAIFNKEDKEVYIADYEHLGVYACRIIVPGMSD
                     IYPAEDLWLANNSMGSHLRETILSLPGSEWEKEDYLNLIEQLDEEGFDDFTRVRELLG
                     LATGSDNGWYTLRIGELKAMLALAGGDLEQALVWTEWTMEFNSSVFSPERANYYRCLQ
                     TLLLLAQEEDRQPLQYLNAFVRMYGADAVEAASAAMSGEAAFYGLQPVDSDLHAFAAH
                     QSLLKAYEKLQRAKAAFWAK"
     gene            5684..6541
                     /gene="focA"
                     /locus_tag="JN001_003401"
     CDS             5684..6541
                     /gene="focA"
                     /locus_tag="JN001_003401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate transporter FocA"
                     /protein_id="HAY9054523.1"
                     /translation="MKADNPFDLLLPAAMAKVAEEAGVYKATKHPLKTFYLAITAGVF
                     ISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTSTVLIVVAKAS
                     GRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHT
                     FIEAVCLGILANLMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIP
                     MGIVIRDFASPEFWTAVGSAPENFSHLTVMNFITDNLIPVTIGNIIGGGLLVGLTYWV
                     IYLRENDHH"
     gene            6596..8878
                     /gene="pflB"
                     /locus_tag="JN001_003402"
     CDS             6596..8878
                     /gene="pflB"
                     /locus_tag="JN001_003402"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_459948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HAY9054524.1"
                     /translation="MSELNEKLATAWEGFTKGDWQNEVNVRDFIQKNYTPYEGDESFL
                     AGATEATTTLWDKVMEGVKLENRTHAPVDFDTAVASTITSHDAGYINKQLEKIVGLQT
                     EAPLKRALIPFGGIKMIEGSCKAYNRELDPMIKKIFTEYRKTHNQGVFDVYTPDILRC
                     RKSGVLTGLPDAYGRGRIIGDYRRVALYGIDYLMKDKLAQFTSLQADLENGVNLEQTI
                     RLREEIAEQHRALGQMKEMAAKYGYDISGPATNAQEAIQWTYFGYLAAVKSQNGAAMS
                     FGRTSTFLDVYIERDLKAGKITEQEAQEMVDHLVMKLRMVRFLRTPEYDELFSGDPIW
                     ATESIGGMGLDGRTLVTKNSFRFLNTLYTMGPSPEPNMTILWSEKLPLNFKKFAAKVS
                     IDTSSLQYENDDLMRPDFNNDDYAIACCVSPMIVGKQMQFFGARANLAKTMLYAINGG
                     VDEKLKMQVGPKSEPIKGDLLNYDEVMERMDHFMDWLAKQYITALNIIHYMHDKYSYE
                     ASLMALHDRDVIRTMACGIAGLSVAADSLSAIKYAKVKPIRDEDGLAIDFEIEGEYPQ
                     FGNNDPRVDDLAVDLVERFMKKIQKLHTYRDAIPTQSVLTITSNVVYGKKTGNTPDGR
                     RAGAPFGPGANPMHGRDQKGAVASLTSVAKLPFAYAKDGISYTFSIVPNALGKDDEVR
                     KTNLAGLMDGYFHHEASIEGGQHLNVNVMNREMLLDAMENPEKYPQLTIRVSGYAVRF
                     NSLTKEQQQDVITRTFTQSM"
     gene            9070..9810
                     /gene="pflA"
                     /locus_tag="JN001_003403"
     CDS             9070..9810
                     /gene="pflA"
                     /locus_tag="JN001_003403"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase 1-activating protein"
                     /protein_id="HAY9054525.1"
                     /translation="MSVIGRIHSFESCGTVDGPGIRFITFFQGCLMRCLYCHNRDTWD
                     THGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAILQAEFVRDWFRACKKEGIHT
                     CLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGVSNHRTLEFAKYLANK
                     NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKHKWVAMGEEYK
                     LDGVKPPKKETMERVKGILEQYGHKVMF"
BASE COUNT         2534 a         2488 c         2355 g         2518 t
ORIGIN      
        1 atgtgccgac gttttgataa agaaagattt ggctatttat tgcccgttgt tcattcaggc
       61 tgcctggcta atccgcgcca actgctcgaa ataatccgga aatgttttgg ccgtacattt
      121 gggatcaaga atcgtcactg gtgtatctga caacgccacc agcgagaaac acatcgccat
      181 ccggtgatca ttgtatgtcg cgatctcggc aaagttcagt ttttccggtg gagtgatacg
      241 aatgtaatcg tgcccctctt ctacttccgc accgacttta cgcagttctg ttgccatcgc
      301 aaacaggcga tcggtttctt taacacgcca gttatagata ttgcgcagcg tggtggtgcc
      361 ttttgcaaat aacgccgccg tggcaatggt catcgccgca tcgggaatat ggttcatatc
      421 catatcaata gcgttcagtt caccacgcgt gcaggaaata taatcatcgc cccagcaaat
      481 ggtcgcgccc attttttcca gcacatcagc aaagcgaata tcaccctgca tactgttacg
      541 tccaataccg gtcactttta cagtgccgcc tttgattgct gctgctgcca gaaagtaaga
      601 agccgaagat gcatcgcctt cgaccaaata agtacccgga gactgataag actgtccgcc
      661 ttttacgaca aattgttgat agtgctgatt ttcaatttca acaccaaacg tcttcatcag
      721 attgagtgtg atgtcgatat aaggtttaga aaccagatcg cctttaatac gaatcaccgt
      781 atcttccggc gcaagaggcg cagtcattaa cagtgcggtg aggaattggc tggaaacgga
      841 gccatcaacg tcaacgttgc cgccagtaaa gccgccctgt aaacgcaacg gcggataatt
      901 ttcttgttcc aggtaagtga tcttcgcccc gcccaggcgc agcgcatcca ccagatgacc
      961 aatcgggcgt tctttcatac gcggctcacc ggtcagcaca atatcattgc tacccagaca
     1021 aagagctgcc gccagcggac gcattgccgt tccggcgtta ccgaggaaca actccagggc
     1081 accttctgcg tgtaatggac cgccgttacc gataatttcg caacgcgtac gatcggctga
     1141 aagcgtatag cttaccccta acgctgttaa tgcattcagc atatggcgca cgtcatcgct
     1201 atccagcaga ttggttaata ctgttttgcc gtgtgctaat gccgccagca ataaagcgcg
     1261 gttagaaacg ctcttggaac cgggcagatt aatagtgcca tcgacacgag cgatgggttg
     1321 taacgtcagg gattccatga actcaactct ctacaacaga aataaaaacc ccacaggctg
     1381 gctgtgggga ttaagcaaaa tttcggcatt aaccgtgacg gcgttcgaac tcaaccatga
     1441 agtctgtcag cgctttaacg ccttccagcg gcatggcgtt ataaatagaa gcgcgcattc
     1501 cgccgaccac acggtgacct ttcagtgcat gaaggccagc agcaaaagac tcttcaagga
     1561 acaatttgtc aagcgcactg tccgccaact ggaacggcac gttcatccgc gaacggttag
     1621 ctttcgccac gtcattgcgg tagaaatcgc tgttatcaat caccccatat agcagttctg
     1681 ctttttgctg attgatttta tccatttcag ctacaccgcc gttcgctttc agccatttaa
     1741 agaccagacc agatagatac caggcaaatg tcggcggcgt gttaaacatg gagccgttat
     1801 cgttgaagat ggaataatcc agtatcgacg gacacgcgat attcgctttg cccagcaaat
     1861 cttcacgaac gatgacgatt gtcaggccag ccgggccgat atttttctgc gcgccagcgt
     1921 aaatcacgcc ataacggctg acgtcaatcg gacgggaaag aatggttgaa gagaagtcgg
     1981 cggcgaccac cacatctttg ccgaagtctg gcgtttcgtc gatggcgata ccgtcgatgg
     2041 tttcattcgg gcagtaatgc atataagcag cattatcaga gagttgccat tcacgcattg
     2101 gcttaaccgc gcgcagacca tcaacagtca ctttggcgtc aaagacatta ggcgtgcagt
     2161 attttttcgc ttctttaatg gcacttgccg cccagtaacc ggcatcaaca taatctgcgg
     2221 tggttttatc accgagaata ttcagcggta ccgcagcaaa ctgaccgcga ccaccgccat
     2281 ggcagaataa taccttgtag ttggagggga cattaagaag atcgcgaaaa tccttctcgg
     2341 cttcctctgc aacctgaatg aactctttgc cacggtgact cacttccatc accgacgtac
     2401 caagaccgtt ccagtcgcgc agttcctgtt gagcctgttt aagcacctct gccggtagca
     2461 ttgccggacc agaactaaaa ttgaagattt gagccatttc ccctcaccac gttgcgttgc
     2521 tattaacccg cggtcaatcg attgcgacca caggtaatac attattcctg tggctatcgg
     2581 ttttatcatt cagtgacaca catcgcaatg agtaaaaccg ttgagggcaa aaatgaggct
     2641 tgcatcacac aaaagaatct ctcggattat tagcaaaaag ccgatgtttt tactgtcagg
     2701 tcacccgttt tgcccgactt gccttcgtcc attctggatt tgcacagcgc ggacataatt
     2761 gtttttcccc cgctttcata tgaatgattt cactacaacg aatacaggca tagtccgccg
     2821 actccggcac cactttgtaa cgctgcgtac aatcactggg taaaataagt aaacccggtt
     2881 tcaccttgtc atcttcaaag aaatagacac tgatttgccc gttggtttcg agaatcgcca
     2941 gacgtacctg ccccagctgc tccacgccac gcaatcgtag ctccataaag aactcaaatt
     3001 ccgtcatgtt ggagttattg agtttcgacc aggccagctc gccatcttca ataataacaa
     3061 ccggcttacc ttccagtaga tcttccagtt tttcactgtg cgccatcaac cacattacca
     3121 ggcggtataa caacgccaga gtgataaaga cgataagtac cggcaccatc ggcacatcat
     3181 cataaaacgc cacatctccc gccgctgaac ccagcgtgag aatgattaac acttcaaaca
     3241 gcgacatctg tcgcacaccg cgtcttccgg tcattttgag gaacaaaaaa accagtacaa
     3301 aggtataaag actacgtagt gcaacttcgc caaggaaatc aaaaggcact ttatcaaatg
     3361 ccatacggtg gagatcgaac gccttcattt ttatgctctt atcgtggttt attcgctaaa
     3421 agcatagtca acagttcatc ggcatggcgg cggtgatagc gcctttgaga taaaacccgt
     3481 attattgcgc gctttccgta cgactaaagt gattttcatg acgcaaacat ttatccccgg
     3541 caaagatgcc gctctggaag attccatcgc tcgcttccag caaaaacttt cagacctcgg
     3601 ctttcagatt gaagaggcct cctggctgaa tcctgtgcct aacgtctggt ctgtacatat
     3661 tcgcgacaaa gagtgcgcac tgtgttttac caacggtaaa ggcgcaacca aaaaagcggc
     3721 gctggcttct gcacttggtg aatatttcga gcgtctctca accaactact tttttgctga
     3781 tttctggctg ggcgaaacca tcgccaacgg tccgttcgtg cattatccca acgaaaaatg
     3841 gttcccactg accgaaaatg acgatgtgcc agaaggacta ctcgatgacc gtctgcgcgc
     3901 gttttatgat ccggagaatg aactgaccgg cagcatgctg attgacctac aatccggtaa
     3961 cgaagatcgt ggtatttgcg gcctgccgtt tacgcgtcag tccgacaatc agaccgttta
     4021 tattccgatg aatatcattg gtaacctgta cgtctccaac ggtatgtccg caggtaatac
     4081 ccgcaacgaa gcacgcgttc agggattgtc tgaagttttc gaacgctacg tgaaaaaccg
     4141 cattattgct gaaagcatca gcctgccaga gatcccggca gacgtgctgg cgcgttaccc
     4201 agcggtggtt gaagcgatcg aaacactgga agcagaaggt ttcccgatct tcgcatatga
     4261 tggttccctt ggcggccagt atccggtgat ttgcgtggta ctgttcaatc ctgctaacgg
     4321 tacctgcttt gcctctttcg gtgcgcatcc tgattttggc gtagcactgg aacgtaccgt
     4381 gaccgagctg ctgcaaggtc gtggcctgaa agatttggat gtgtttactc cgccaacctt
     4441 cgatgatgaa gaagtcgctg aacataccaa cctcgaaacg cactttatcg attccagcgg
     4501 tttaatctcc tgggacctgt tcaagcagga tgccgattat ccgtttgtgg actggaattt
     4561 ctccggcacc acggaagaag agtttgctac gctgatggct atcttcaaca aagaagataa
     4621 agaagtttat attgccgatt acgagcatct gggcgtttat gcttgccgta ttatcgtgcc
     4681 tggcatgtcc gatatttatc cggctgaaga tctgtggctc gcgaataaca gtatgggcag
     4741 ccatttacgt gaaacgattc tttcgctacc aggcagcgag tgggaaaaag aagattacct
     4801 gaacctcatc gagcaactgg atgaagaagg ttttgatgac tttacccgcg tgcgtgagct
     4861 gttgggtctg gcgaccgggt cggataacgg ttggtacacc ctgcgtatcg gtgaattaaa
     4921 agccatgctg gcgctggctg gtggcgatct ggaacaggct ctggtctgga ccgaatggac
     4981 gatggagttt aactcatcag tatttagtcc ggaacgcgcc aactattatc gctgcctgca
     5041 aacgttgtta ttactggcac aggaagaaga tcgccagccg ctgcaatatc tgaatgcgtt
     5101 tgttcgcatg tacggcgcag atgccgtgga agccgccagt gcggcaatga gcggcgaagc
     5161 ggcgttttac ggcctgcaac cggtagatag cgatctgcac gcgtttgctg cacatcagtc
     5221 gttgttgaag gcctacgaaa agctgcagcg cgccaaagca gcattctggg caaaataaaa
     5281 tcaaatagcc tacgcaatgt aggcttaatg attagtctga gttatattac ggggcgtttt
     5341 tttaatgccc cgctttacat atatttgcat taataaaata attgtaatta taaggttaaa
     5401 tatcggtaat ttgtatttaa taaatacgat cgatattgtt actttattcg cctaatgctc
     5461 ccttttaatt aactatttta gcggaggatg cggaaaaaat tcaactcatt tgttaatttt
     5521 taaaatttat ttttatttgg ataatcaaat atttactccg tatttgcata aaaaccatgc
     5581 gagttacgga cctataagcc aggcgagata tgatctatat caatttctca tctataatgc
     5641 tttgttagta tctcgtcgcc gacttaataa agagagagtt agtgtgaaag ctgacaaccc
     5701 ttttgatctt ttacttcctg ctgcaatggc caaagtggcc gaagaggcgg gtgtctataa
     5761 agcaacgaaa catccgctta agactttcta tctggcgatt accgccggtg ttttcatctc
     5821 aatcgcattc gtcttctata tcacagcaac cactggcaca ggcacaatgc ccttcggcat
     5881 ggcaaaactg gttggcggca tttgcttctc tctggggctg attctttgtg ttgtctgcgg
     5941 agctgatctc tttacttcca ccgtgttgat tgttgttgct aaggcgagtg ggcgcatcac
     6001 ctggggtcag ttggcgaaaa actggctaaa tgtctatttt ggcaacctgg tcggcgcact
     6061 gctgtttgta cttttaatgt ggctttccgg cgagtatatg accgcaaatg gtcaatgggg
     6121 actaaacgtc ctacaaaccg ccgaccacaa agtgcaccat acttttattg aggccgtctg
     6181 tcttggtatc ctggcaaacc tgatggtatg tctggcagta tggatgagtt attctggccg
     6241 cagcctgatg gacaaagcgt tcattatggt gctgccggtc gcgatgtttg ttgccagcgg
     6301 ttttgagcac agtatcgcaa acatgtttat gatcccgatg ggtattgtaa tccgcgactt
     6361 cgcatctccg gaattctgga ccgctgtcgg ttctgcaccg gaaaattttt ctcacctgac
     6421 cgtgatgaac ttcatcactg ataacctgat cccggttacg atcggtaata ttatcggcgg
     6481 tggtttgttg gttgggttga catactgggt catttacctg cgtgaaaacg atcaccatta
     6541 atggttgtcg aagtacgcag taaataaaaa atccacttaa gaaggtaggt gttacatgtc
     6601 cgagcttaat gaaaagttag ccacagcctg ggaaggtttt accaaaggtg actggcagaa
     6661 tgaagtaaac gtccgtgact tcattcagaa aaactacact ccgtacgagg gtgacgagtc
     6721 cttcctagct ggcgctactg aagcgaccac caccctgtgg gacaaagtaa tggaaggcgt
     6781 taaactggaa aaccgcactc acgcgccagt tgactttgac accgctgttg cttccaccat
     6841 cacctctcac gacgctggct acatcaacaa gcagcttgag aaaatcgttg gtctgcagac
     6901 tgaagctccg ctgaaacgtg ctcttatccc gttcggtggt atcaaaatga tcgaaggttc
     6961 ctgcaaagcg tacaaccgcg aactggatcc gatgatcaaa aaaatcttca ctgaataccg
     7021 taaaactcac aaccagggcg tgttcgacgt ttacactccg gacatcctgc gttgccgtaa
     7081 atctggtgtt ctgaccggtc tgccagatgc atatggccgt ggccgtatca tcggtgacta
     7141 ccgtcgcgtt gcgctgtacg gtatcgacta cctgatgaaa gacaaactgg cacagttcac
     7201 ttctctgcag gctgatctgg aaaacggcgt aaacctggaa cagactatcc gtctgcgcga
     7261 agaaatcgct gaacagcacc gcgctctggg tcagatgaaa gaaatggctg cgaaatacgg
     7321 ctacgacatc tctggtccgg ctaccaacgc tcaggaagct atccagtgga cttacttcgg
     7381 ctacctggct gctgttaagt ctcagaacgg tgctgcaatg tccttcggtc gtacctccac
     7441 cttcctggat gtgtacatcg aacgtgacct gaaagctggc aagatcaccg aacaagaagc
     7501 gcaggaaatg gttgaccacc tggtcatgaa actgcgtatg gttcgcttcc tgcgtactcc
     7561 ggaatacgat gaactgttct ctggcgaccc gatctgggca accgaatcta tcggtggtat
     7621 gggcctcgac ggtcgtaccc tggttaccaa aaacagcttc cgtttcctga acaccctgta
     7681 caccatgggt ccgtctccgg aaccgaacat gaccattctg tggtctgaaa aactgccgct
     7741 gaacttcaag aaattcgccg ctaaagtgtc catcgacacc tcttctctgc agtatgagaa
     7801 cgatgacctg atgcgtccgg acttcaacaa cgatgactat gctatcgctt gctgcgtaag
     7861 cccgatgatc gttggtaaac aaatgcagtt cttcggtgcg cgtgcaaacc tggcgaaaac
     7921 catgctgtac gcaatcaacg gcggcgttga cgaaaaactg aaaatgcagg ttggtccgaa
     7981 gtctgaaccg atcaaaggcg atctcctgaa ctacgatgaa gtgatggagc gcatggatca
     8041 cttcatggac tggctggcta aacagtacat cactgcactg aacatcatcc actacatgca
     8101 cgacaagtac agctacgaag cctctctgat ggcgctgcac gaccgtgacg ttatccgcac
     8161 catggcgtgt ggtatcgctg gtctgtccgt tgctgctgac tccctgtctg caatcaaata
     8221 tgcgaaagtt aaaccgattc gtgacgaaga cggtctggct atcgacttcg aaatcgaagg
     8281 cgaatacccg cagtttggta acaatgatcc gcgtgtagat gacctggctg ttgacctggt
     8341 agaacgtttc atgaagaaaa ttcagaaact gcacacctac cgtgacgcta tcccgactca
     8401 gtctgttctg accatcactt ctaacgttgt gtatggtaag aaaactggta acaccccaga
     8461 cggtcgtcgt gctggcgcgc cgttcggacc gggtgctaac ccgatgcacg gtcgtgacca
     8521 gaaaggtgct gtagcgtctc tgacttccgt tgctaaactg ccgtttgctt acgctaaaga
     8581 tggtatctcc tacaccttct ctatcgttcc gaacgcactg ggtaaagacg acgaagttcg
     8641 taagaccaac ctggctggtc tgatggatgg ttacttccac cacgaagcat ccatcgaagg
     8701 tggtcagcac ctgaacgtta acgtgatgaa ccgtgaaatg ctgctcgacg cgatggaaaa
     8761 cccggaaaaa tatccgcagc tgaccatccg tgtatctggc tacgcagtac gtttcaactc
     8821 gctgactaaa gaacagcagc aggacgttat tactcgtacc ttcactcaat ctatgtaatt
     8881 agatttgact gaaatcgtac agtaaaaagc gtacaataaa ggctccacga aagtggggcc
     8941 ttttttagca cgagagcctt ttttgtcagc tatctatact ttaaggtgac tgccaaaaca
     9001 gactcgacgt agccttcgag ctgcgcacca acacggcctc agatgggcca catctggaga
     9061 aacaccgcaa tgtcagttat tggtcgcatt cactcctttg aatcctgtgg aaccgtagac
     9121 ggcccgggta ttcgctttat cacctttttc cagggctgcc tgatgcgctg cctgtattgt
     9181 cataaccgcg acacctggga cacgcatggc ggtaaagaag ttaccgttga agatttgatg
     9241 aaggaagtgg tgacctatcg ccactttatg aacgcttccg gcggcggcgt taccgcatcc
     9301 ggcggtgaag caatcctgca agctgagttt gttcgtgact ggttccgcgc ctgcaaaaaa
     9361 gaaggcattc atacctgtct ggacaccaac ggttttgttc gtcgttacga tccggtgatt
     9421 gatgaactgc tggaagtaac cgacctggta atgctcgatc tcaaacagat gaacgacgag
     9481 atccaccaaa atctggttgg agtttccaac caccgcacgc tggagttcgc caaatatctg
     9541 gcgaacaaaa atgtgaaggt gtggatccgc tacgttgttg tcccaggctg gtctgacgat
     9601 gacgattcag cgcatcgcct cggtgaattt acccgtgata tgggcaacgt tgagaaaatc
     9661 gaactcctcc cctaccacga gctgggcaaa cacaaatggg tggcaatggg tgaagagtac
     9721 aaactcgacg gtgttaaacc acctaagaaa gagaccatgg aacgcgtgaa aggcattctt
     9781 gagcagtacg gtcataaggt aatgttctaa tttccccgta aagcggcaac tttattgagt
     9841 tgccgctttt ttattccgcg cttcattctg ctacagtgtt tttaacacat tttat
//
LOCUS       DADMJE010000157         9656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.160, whole genome shotgun sequence.
ACCESSION   DADMJE010000157 DADMJE010000000
VERSION     DADMJE010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.160"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..1093)
                     /gene="fdeC"
                     /locus_tag="JN001_003404"
                     /pseudo
     CDS             complement(1..1093)
                     /gene="fdeC"
                     /locus_tag="JN001_003404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308363.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="intimin-like adhesin FdeC"
     gene            1646..1735
                     /locus_tag="JN001_003405"
                     /pseudo
     CDS             1646..1735
                     /locus_tag="JN001_003405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308358.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
     gene            2209..2310
                     /locus_tag="JN001_003406"
     CDS             2209..2310
                     /locus_tag="JN001_003406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054526.1"
                     /translation="MKENKVQQISHKLINIVVFVAIVEYAYLFLHFY"
     gene            2671..2937
                     /locus_tag="JN001_003407"
     CDS             2671..2937
                     /locus_tag="JN001_003407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308354.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HAY9054527.1"
                     /translation="MMKPNIHPEYRTVVFHDTSVDEYFKIGSTIKTDREIELDGVTYP
                     YVTIDVSSKSHPFYTGKLRTVASEGNVARFTQRFGRFVSTKKGS"
     gene            2937..3077
                     /gene="rpmJ"
                     /locus_tag="JN001_003408"
     CDS             2937..3077
                     /gene="rpmJ"
                     /locus_tag="JN001_003408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HAY9054528.1"
                     /translation="MKVLNSLRTAKERHPDCQIVKRKGRLYVICKSNPRFKAVQGRKK
                     KR"
     gene            complement(3112..3339)
                     /locus_tag="JN001_003409"
                     /pseudo
     CDS             complement(3112..3339)
                     /locus_tag="JN001_003409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414829.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4163..4705
                     /gene="ecpR"
                     /locus_tag="JN001_003410"
                     /gene_synonym="matA"
     CDS             4163..4705
                     /gene="ecpR"
                     /locus_tag="JN001_003410"
                     /gene_synonym="matA"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308351.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECP biosynthesis operon DNA-binding
                     transcriptional regulator EcpR"
                     /protein_id="HAY9054529.1"
                     /translation="MECQNRSDKYIWSPHDAYFYKGLSELIVDIDRLIYLSLEKIRKD
                     FVFINLNTDSLSEFINRDNEWLSAVKGKQVVLIAARKSEALANYWYYNSNIRGVVYAG
                     LSRDIRKELAYVINGRFLRKDIKKDKITDREMEIIRMTAQGMQPKSIARIENCSVKTV
                     YTHRRNAEAKLYSKIYKLVQ"
     gene            4731..5366
                     /gene="ecpA"
                     /locus_tag="JN001_003411"
                     /gene_synonym="matB"
     CDS             4731..5366
                     /gene="ecpA"
                     /locus_tag="JN001_003411"
                     /gene_synonym="matB"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000150122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="common pilus major fimbrillin subunit EcpA"
                     /protein_id="HAY9054530.1"
                     /translation="MTHWDITSSIQLGKKCNEKKVLAIALVTVFTGMGVAQAADVTAQ
                     AVATWSATAKKDTTSNLVVTSLGSLAFQYAEGIKGFNSQKGLFDVAIEGDSTATAFKL
                     TSRLITNTLTQLDTSGSTLNVGVDYNGAAVEKTGDTVMIDTANGVLGGNLSPLANGYN
                     ASNRTTAQDGFTFTIISGTTNGTTAVTDYSTLPEGIWSGDVSVQFDATWTS"
     gene            5424..6092
                     /locus_tag="JN001_003412"
     CDS             5424..6092
                     /locus_tag="JN001_003412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone EcpB"
                     /protein_id="HAY9054531.1"
                     /translation="MKKHLLPLALLFSGISPAQALDVGDISSFMNSDSSTLSKTIKNS
                     TDSGRLINIRLERLSSPLDDGQVISMDKPDELLLTPASLLLPAQASEVIRFFYKGPAD
                     EKERYYRIVWFDQALSDAQRDNANRSAVATASARIGTILVVAPRQANYHFQYANGSLT
                     NTGNATLRILAYGPCLKAANGKECKENYYLMPGKSRRFTRVDTADNKGRVALWQGDKF
                     IPVK"
     gene            6118..8642
                     /locus_tag="JN001_003413"
                     /pseudo
     CDS             6118..8642
                     /locus_tag="JN001_003413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414825.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            8632..>9656
                     /gene="ecpD"
                     /locus_tag="JN001_003414"
     CDS             8632..>9656
                     /gene="ecpD"
                     /locus_tag="JN001_003414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial adhesin EcpD"
                     /protein_id="HAY9054532.1"
                     /translation="MRVNLLITMIIFALIWPVTALRAAVSKTTWADAPAREFVFVENN
                     SDDNFFVTPGGALDPRLTGANRWTGLKYTGSGTIYQQSLGYIDNGYNTGLYTNWKFDM
                     WLENSPVSSPLTGLRCINWYAGCNMTTSLILPQTTDASGFYGATVTSGGAKWMHGMLS
                     DAFYQYMQQMPVGSSFTMTINACQTSVNYDASSGARCKDQASGNWYVRNVTHTKAANL
                     RLINTHSLAEVFINSDGVPTLGEGNADCRTQTIGSLSGLSCKMVNYTLQTNGLSNTSI
                     HIFPAIANSSLASAVGAYDMQFSLNGSSWKPVSNTAYYYTFNEMKSADSIYVFFSSNF
                     FKQMVNLG"
BASE COUNT         2629 a         2369 c         2256 g         2402 t
ORIGIN      
        1 caatacggat cacttcagat ttgcggtact caagaacgat gttgttatta cgctcaacca
       61 ggtcatagcg gctgcctgcc agcattcgac gctcgcgaat gctgtctgta tcgagttgtt
      121 tctccagagg ttcgccaatc cgataattaa cttccaggcc aaagcgagtg tcattctcac
      181 cactcttgcc ctgcttatgc ccggcactca gggtcagaag aggcacaggc gtgtaattca
      241 cttcagcgga aatcgcatgt ggatctttct ggcgtttatc tttgccaaac agcccaactt
      301 catcgccata atactgctca tacatcaggc ttgcgccaag ctgcggtcag gcgggtaaat
      361 agccctcagc acgaatatcc cagccattcg ccgggcgttc ctgataatcc tcaatatccg
      421 gcgatttttt ccagccagaa gcccgaatat aaccattggc gctcagtttc agataatcgc
      481 gccagtattc cgcaccaaca ccaatgcggg tatgactacg ggataaatca tggtcgataa
      541 aggtgttcac cccccccatt cagtcatttc ctgaaaaatg acgccagcca aaaccaatat
      601 ttgactgagt acgatcgtct gtacgatgta ttgccccctg agtgaacaac atatttgtcg
      661 gcgtatcata aatcggataa agcatttcca gcgaagaatc cttcagcgag aaatctttat
      721 cgacattcag tttgacgcgc gctgtaccat atttcccgag ccactcctgt atttcctggt
      781 tagctttagc ggtggccatt ccggtaataa aattacgtgt cgcatcgcta tctggctgac
      841 tgcttaaaaa tgtcccggca tttgcggcaa acgacgcgac atttttctcc acgttattat
      901 cagcagttac cgtagtattt cccatgctca accgtggctg aaccgcatgc tgcgcacgtg
      961 ccgccattac tggggtaaag gtgacagcga gtggaaaaag aacctgaaca gagatatttg
     1021 cccacgccac gcagcgggcc agaactgaat aacgaaatcg tggttgttta tgacctgttt
     1081 tataacgtga cattgagata atttcctgat gaacgaatta acgaacatag gcagacacaa
     1141 ataatggcgt ctgcttgtca gaaaaaccgg ggatttcccg gtttcctttt ccgcagaaaa
     1201 ggaaatacct ttatgtaaga aagtgcaccg ccacctgata tatccagtgt ctgtagccac
     1261 tcatcaggtg gttgggcgcg ggattatatt tttatttatg ggtaaaaatt tagctttttg
     1321 tgcaagtcat taaatagata cctaagttat atttcttact ctgcggacag tgaataattc
     1381 attattcaga ctgaataata atgacctgcc tttaattagc aactattgga aatacgtcga
     1441 agtaggtata tacgccagga taaaccgata tatttattat ggatattcat tttccttcat
     1501 cggactgtaa attgcgggga tatcgaactt acactactca tcgcaacact caaacagatt
     1561 tatgaatttc gttcataacc cctgacaaat cctgccgtct aatcgagctt ttccctttac
     1621 gttatgcttc tcatgaacga gaacacaact tattcatgaa ttaaccattc cggataaact
     1681 atggaatcaa attcaggcat cgaaaggaac tggctggttt ccgttaatag attaaatatc
     1741 tattactctc ccgagagtaa aactatcaaa tcaatgagta accgatacag cctcacaaat
     1801 tctttcagat aattaacccg tcactgcggc acgttctctc gtaaggcgtg cctgcagtgt
     1861 aatccagtat gtatccggca tagttgacgg tttaatagaa ctcaattcct ctccctggtc
     1921 accaacaacg atatcttgta taacacccca ggagatacga cattatgatg agatgcgata
     1981 tgctcctcag caccaatcaa cgccaggact gggccagtct tgagatcaga ctcattcccg
     2041 ggactgactt cagtcgacat atatcaatga cgttggtgca ataaaagata gccgatgtaa
     2101 tacatctatt caaatttgtg atacatgtca aaaaactggt tgaccaaact cgttatttat
     2161 ataagggcac ttacgaagtg cgctcttttt taaagcgagg aagtaccaat gaaagagaat
     2221 aaagtacaac aaatcagtca taaactaatt aatatcgttg tttttgtcgc aattgtagaa
     2281 tacgcctatt tatttctcca tttctattaa taacggcaat aaactgttca cttcagtgat
     2341 atttaaaata tgcattctct ccctttttgt aagtaattat tatatccgtg ggagaggaat
     2401 acacgctgtc aggtaatcaa tcatactgcg ataaatcatc ggccagtaaa gtggagataa
     2461 cctccattgt cgaaaaatcc atactctcag cgaaaccatc atcaatcact catccaggcg
     2521 tttatgggag cgtcgccaac ggctgttaac aatgccagac ttccccgttg cggaaattcc
     2581 acataccact aatggtcaca gggattgggt gttgaaatga tccggatgag catgtatctt
     2641 tatggttatg ctataacata acaggtaaaa atgatgaagc ccaatatcca tcctgagtat
     2701 cgtactgtgg tgttccacga caccagtgtt gatgagtact ttaaaatcgg ctcgactatc
     2761 aaaacagacc gtgagattga gctggatggc gtaacgtatc cgtacgtgac aattgatgtc
     2821 tcttctaaat cgcacccgtt ctatacaggg aagctgagaa cagtggcatc agaaggaaat
     2881 gttgcacgat tcacccaacg ttttggtcgt tttgttagca cgaaaaaggg gtcgtgatga
     2941 aagttcttaa ctctctgcgt accgcaaaag aacgccatcc agactgtcag attgtgaagc
     3001 gaaaaggacg gctatatgtg atttgtaaat ctaatccacg ttttaaggcc gttcaggggc
     3061 gtaagaaaaa acgttgattc aaaattcgac ggattaacga tatttgtctg attaataatc
     3121 agatcggatt aatgttggtg tgtttataac accaacatta attttcctgg ggatatattc
     3181 ttcctgttca tttgaggcca actgcctgac gtttctctac gaatattcca ttatcttaat
     3241 gttgacttgt tgaccagctt cgcccctgta tgctggcatc aactctcttt tagactgaac
     3301 acgccactca gtctcctccc tttgcggcgc agcctgcatt ttcactcaaa ctgttaagat
     3361 gataaatgtg gtaaatctgt tggtactaac ataaaaacgt ttacgccaca ggaacagtct
     3421 gatccaccgg taaccccgtc gccgacgttc gagtgccagt tagagtaacg cgcacagata
     3481 actgcactca gtgccctgac aaagaggcca tcgttcctgt gacagctggc agccttcgtt
     3541 taacttcact taatctggct cttgagggct taccgaacag atgacgtaca tacgcccgtt
     3601 caattttcca tcacttattg taatgaacac ctataaccat tttgtgcggc atgttaatcc
     3661 attaaaattt cttactgatt ggcaaatcat cttcaatgac agctcattat agttttatat
     3721 tctatccctt acccttaaaa cttgtttttt tactagtcca tcacacagcg cattaagact
     3781 attcctaaca cttcagggca aagttcctga ccaatataaa atgcaagtaa gaattgaacg
     3841 ttatattgcc aataacctta tgaaaccaaa tgtctttttc ttcttatcaa aaaagcaata
     3901 ttttcagttt ttctaaatat tgacttaacc attgaattcc ttttccgttc acatattgac
     3961 actcatcgaa aaaaaaaaca taaatttaag cccaatcgaa aataattaaa cttaatctcg
     4021 tttaaccttt attgatatgt actacgtatc ttatttactt ccggtttact aaggaaactg
     4081 aatgcacctg taaaaattac aggtttggaa agtagtgaca tggcaaagtg attacagtag
     4141 ggactatgag gttaaaaacc atatggaatg tcaaaaccgt tctgataaat acatctggtc
     4201 tccccatgac gcctacttct ataaaggact atctgaactg attgtggata tcgacagatt
     4261 aatttatctg tcgttggaga aaattagaaa agatttcgtg tttatcaatc tcaatacgga
     4321 ttctttatct gaatttataa accgtgataa tgaatggtta tccgcggtaa aggggaaaca
     4381 ggtcgtattg attgcggcca gaaagtcaga agccttagca aattattggt actacaacag
     4441 caatattagg ggcgtggtat acgctggact gagtcgtgat attagaaaag aactggccta
     4501 tgtgattaat ggcaggttcc tgagaaaaga tattaagaaa gataaaatca cggaccggga
     4561 aatggaaatt atccgcatga cggcccaggg aatgcaacct aaatcgattg ccagaattga
     4621 aaattgtagt gtgaagacag tgtataccca tcggcgtaat gctgaggcca agctgtactc
     4681 aaaaatatat aagttggttc agtaaactcc aggcaagtta gttttaaaaa atgactcact
     4741 gggacatcac gtcctcaatt caactcggga agaaatgcaa tgaaaaaaag gttctggcaa
     4801 tagctctggt aacggtgttt accggcatgg gtgtggcgca ggctgctgac gtaacagctc
     4861 aggctgtagc gacctggtcg gcaacagcca aaaaagacac caccagtaat ctggttgtga
     4921 cgtcactcgg tagcttggcg ttccagtatg ccgaaggcat taaaggtttt aactcacaga
     4981 aaggtctatt tgacgtggct atcgagggtg actcaacggc taccgccttt aaactgacct
     5041 cacgtcttat caccaacaca ttaactcagt tggatacctc aggttccaca ctgaatgtgg
     5101 gcgtggatta taacggcgcg gcagtcgaaa aaactggcga taccgtgatg atcgataccg
     5161 ccaacggcgt actgggcggc aaccttagcc cgctggctaa cggttacaat gccagcaatc
     5221 gtaccaccgc acaggatggt ttcaccttca ccatcatcag cggcaccacc aatggtacca
     5281 ccgcagtaac cgattacagc actctaccgg aaggcatctg gagcggcgac gttagcgtac
     5341 agttcgacgc gacctggacc agttaatctc tctgatgtac cagcaggggt agcccccctg
     5401 ctttattcct ggacggaatt gttatgaaaa agcaccttct gcctctcgct ctgctgtttt
     5461 ccggaatatc tccggcccag gcgctggatg tcggcgatat atcatcgttt atgaacagtg
     5521 acagcagcac gctgagcaaa acgatcaaaa acagtaccga cagtggtcgc cttatcaata
     5581 tccgtctcga acggctctct tcaccgcttg acgacgggca ggttatctca atggacaagc
     5641 cggatgagtt gctactcact cccgccagct tgctgctacc cgcccaagcc agcgaagtga
     5701 tccgcttctt ctataaggga cccgcagatg aaaaagagcg ctactaccgc attgtctggt
     5761 ttgatcaggc cctcagtgat gcgcagcgcg ataatgccaa ccgcagcgct gtggccactg
     5821 cttccgcccg catcggcacc attctggtcg tcgcccctcg tcaggcgaac taccactttc
     5881 agtacgccaa cggctccctg acaaatacag gaaatgcgac gctgcggatc ctcgcctacg
     5941 gcccctgcct gaaagccgcc aacggtaagg agtgtaaaga gaattactac ctgatgccgg
     6001 gcaagtcgcg tcgttttacc cgcgtggaca ctgcggataa caaaggacgg gttgcacttt
     6061 ggcagggtga taagttcatt cccgtgaaat agatagctgt gcagatggat aacgacaatg
     6121 cctttacgac ggttctcccc aggactgaaa gcccagtttg ccttcggcat ggtctttttg
     6181 ttcgttcagc ccgatgccag cgctgctgac ataagtgcgc agcaaatagg tggggtgatt
     6241 attccgcagg ccttcagtca ggcgcttcag gacggcatga gcgtcccgct ctatattcat
     6301 ctcgccggta gtcagggtcg ccaggacgat cagcgaatcg gcagcgcttt tatctggctg
     6361 gatgatggac agctacgcat ccggaaaata cagctggaag agagtgaaga taacgccagt
     6421 gtcagcgaac aaactcgaca gcagctgatg gctctggcga acgccccgtt caatgaggcc
     6481 cttaccatcc cctgactgac aacgcgcagt tggatctcag cttgcgccaa ctgctgctgc
     6541 agctggtggt caagcgcgaa gcgctgggca ccgtactacg ctcacgtagc gaagacatcg
     6601 ggcagtccag tgttaacacc ctcagcagta atctgagcta taacttgggc gtctataaca
     6661 accagttgcg taacggcggg agcaacacat ccagctatct gtcgctgaat aacgttactg
     6721 cgctgcgcga acatcatgtg gtgctcgacg gctcgctgta cgggatcggt agcggtcaac
     6781 aggacagtga attatataaa gcgatgtatg aacgcgattt tgccggtcac cgatttgccg
     6841 gtggaatgct cgacacctgg aacttgcagt cattagggcc gatgaccgcc atttcagcag
     6901 ggaagattta cggcctttcc tggggaaacc aggccagctc caccatcttc gacagcagcc
     6961 agtcagccac gccagtgatc gcctttttac cggcggcggg cgaagtacat ctcacccgtg
     7021 atgggcggct actaagcgtt cagaacttca ctatgggcaa tcatgaagtg gatacccggg
     7081 gtctaccgta cggtatttac gatgtggaag ttgaggtgat cgttaacggt cgcgtgatca
     7141 gcaaacgcac tcaacgggtc aataagctgt ttagccgggg cgcggcgtcg gtgcaccact
     7201 ggcgtggcag gtatggggcg gtagctttca tatggatcgc tggtcggaaa acgggaaaaa
     7261 gacgcgacca gctaaagaga gttggctagc aggtgcctcg acctccggct cattgagtac
     7321 gcttagctgg gcggcaacgg gatatggata cgataatcag gcggtgggtg aaacccgtct
     7381 gacgctgccg cttggggggg cgatcaacgt taacctgcaa aatatgctgg ccagtgacag
     7441 ctcatggagc agcatcggca gcatcagcgc tactctaccg ggaggcttta gttcgctgtg
     7501 ggttaaccag gaaaaaaccc gtattggcaa tcaattgcga cgtagcgatg ccgacaaccg
     7561 tgcaatcggc ggcacactca acctgaactc actgtggtcg aagctgggca cattcagcat
     7621 cagctacaat gatgaccgcc gttacaacag ccattattac acggcagatt actatcaaaa
     7681 tgtctacagc ggtacctttg gttcgcttgg cctgcgggcc ggtattcagc gctataacaa
     7741 cggcgacagc aacgccaata cagggaaata tatcgctctc gatctctcgc taccactggg
     7801 caactggttt agcgcaggga tgacccatca aaacggctac accatggcaa acctgtcagc
     7861 acgcaaacag tttgatgaag ggaccattcg cactgttggt gccaatctgt cacgtgccat
     7921 ctccggcgat accggtgatg acaaaaccct cagcggtggg gcgtatgcac agttcgacgc
     7981 tcgttacgcc agcggaacgc tgaacgtcaa tagcgcggcg gacggctacg tcaataccaa
     8041 cttgaccgcc aatggcagcg tcggctggca gggtaaaaac attgctgcca gcgggcggac
     8101 tgatggcaac gctggggtga tattcaacac cgggctggag gacgacggtc agatcagcgc
     8161 caaaatcaac gggcggattt tcccgcttaa cggcaagcgt aactatctcc cgctctctcc
     8221 ctatggaaga tatgaggtgg agttacagaa cagcaaaaac tcactcgaca gttacgatat
     8281 cgtcagcggc cgcaaaagtc gtctgactct ctatccaggc aatgtcgctg tcattgagcc
     8341 agaggtgaag cagatggtta ccgtctccgg tcgtatccgt gcggaagacg gcacactgct
     8401 ggctaacgca cggattaaca atccatatcg gccgaacccg aaccgatgaa aacggcgagt
     8461 ttgtcatgga cgtggataag aaatacccca ctatcgattt tcgctacagt ggcaataaaa
     8521 cctgcgaagt ggctctggaa ctcaaccaag cgcgcggtgc cgtctgggtc ggtgatgtgg
     8581 tctgcagcgg cctctcatcg tgggcggcgg tgacgcagac aggagaagag aatgagagtt
     8641 aacctactaa taacgatgat aattttcgcg ctaatctggc cagtaactgc gctcagagcg
     8701 gcagtgagca aaacaacctg ggcggatgca ccggcacgcg agtttgtgtt tgtcgaaaac
     8761 aactcagacg acaacttttt cgtcactcct ggcggggcgc tggatccgcg cctgaccggt
     8821 gccaaccgct ggaccggttt aaaatacact ggttcaggaa ccatctatca gcaaagcctc
     8881 ggctacattg ataacggtta caacaccggc ctttatacca actggaagtt tgatatgtgg
     8941 ctggaaaatt cgccggtttc atctccttta actggcttac gctgcatcaa ctggtacgca
     9001 gggtgtaata tgaccaccag tcttatcctg ccgcaaacca ccgacgccag tggattttat
     9061 ggcgcgacgg tgaccagcgg cggcgcgaag tggatgcacg gcatgttgtc agacgcgttt
     9121 taccagtata tgcaacaaat gcccgtcggc agcagcttta caatgaccat caatgcctgt
     9181 cagacctctg tgaactatga cgccagcagc ggcgcgcgtt gtaaggatca ggcctccggc
     9241 aactggtatg ttcgcaatgt cacccatacg aaagcagcaa atcttcggtt aataaatacc
     9301 cactcgctgg cggaggtatt tatcaacagc gacggggtgc cgaccctggg cgaagggaac
     9361 gccgactgcc ggacacagac catcggcagc ctttcaggat taagttgtaa gatggtcaac
     9421 tataccctgc aaacaaacgg actcagcaac acctcaatcc atatattccc ggcgatcgcc
     9481 aactcgtcgt tagcctcggc cgtcggggcg tacgatatgc agttcagtct gaatggcagt
     9541 tcatggaaac cggtgagcaa taccgcctat tactacacct tcaacgagat gaagagcgca
     9601 gactcgatct atgttttctt ctcgagcaac ttctttaagc agatggtgaa cctcgg
//
LOCUS       DADMJE010000158         9498 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.161, whole genome shotgun sequence.
ACCESSION   DADMJE010000158 DADMJE010000000
VERSION     DADMJE010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9498)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9498)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9498
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.161"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..191
                     /locus_tag="JN001_003415"
     CDS             <1..191
                     /locus_tag="JN001_003415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054533.1"
                     /translation="AHFMMSGGNILALQKILGHHDIKMTMRYAHLAPDHLETALRFNP
                     LATLPSGDKVAAAVGITP"
     gene            complement(296..832)
                     /locus_tag="JN001_003416"
     CDS             complement(296..832)
                     /locus_tag="JN001_003416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HAY9054534.1"
                     /translation="MRRANDPQRREKIIQATLEAVKLYGIHAVTHRKIATLAGVPLGS
                     MTYYFSGIDELLLEAFSSFTEIMSRQYQAFFSDVSDAQGACQAITDMIYSSQVATPDN
                     MELMYQLYALASRKPLLKTVMQNWMQRSQQTLEQWFEPGTARALDAFIEGMTLHFVTD
                     RKPLSREEILRMVERVAG"
     gene            916..2124
                     /locus_tag="JN001_003417"
     CDS             916..2124
                     /locus_tag="JN001_003417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054535.1"
                     /translation="MTVNSSRNALKRRTWALFMFFFLPGLLMASWATRTPAIRDILSV
                     SIAEMGGVLFGLSIGSMSGILCSAWLVKRFGTRNVILVTMSCALIGMMILSLALWLTS
                     PLLFAVGLGVFGASFGSAEVAINVEGAAVEREMNKTVLPMMHGFYSLGTLAGAGVGMA
                     LTAFGVPATVHILLAALVGIAPIYIAIQAIPDGTGKNAADGTQHGEKGIPFYRDIQLL
                     LIGVVVLAMAFAEGSANDWLPLLMVDGHGFSPTSGSLIYAGFTLGMTVGRFTGGWFID
                     RYSRVAVVRASALMGALGIGLIIFVDSAWVAGVSVVLWGLGASLGFPLTISAASDTGP
                     DAPTRVSVVATTGYLAFLVGPPLLGYLGEHYGLRSAMLVVLALVILAAIVAKAVAKPD
                     TKTQTAMENS"
     gene            2124..2939
                     /gene="ybjI"
                     /locus_tag="JN001_003418"
     CDS             2124..2939
                     /gene="ybjI"
                     /locus_tag="JN001_003418"
                     /EC_number="3.1.3.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415365.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(5-phospho-D-ribitylamino)uracil
                     phosphatase"
                     /protein_id="HAY9054536.1"
                     /translation="MSIKLIAVDMDGTFLSDQKTYNRERFMAQYQQMKAQGIRFVVAS
                     GNQYYQLISFFPEIANEIAFVAENGGWVVSEGKDVFNGELSKDAFTTVVEHLLTRPEV
                     EIIACGKNSAYTLKKYDDAMKTVAEMYYHRLEYVDNFDNLEDIFFKFGLNLSDELIPQ
                     VQKALHEAIGDIMVPVHTGNGSIDLIIPGVHKANGLRQLQKLWGIDDSEVVVFGNGGN
                     DIEMLRQAGFSFAMENAGSAVVAAAKYRAGSNNREGVLDVIDKVLKHEAPFDQ"
     gene            3025..3309
                     /locus_tag="JN001_003419"
     CDS             3025..3309
                     /locus_tag="JN001_003419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054537.1"
                     /translation="MIMKNCLLLGALLMGFTGVAMAQSVTVDVPSGYKVVVVPDSVSV
                     PQAVSVATVPQTVYVAPAPAPAYRPHPYARHLASVGEGMVIEHQIDDHHH"
     gene            complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JN001_003420"
                     /pseudo
     CDS             complement(3350..4580)
                     /gene="mdfA"
                     /locus_tag="JN001_003420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308949.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdfA"
     gene            4865..5461
                     /gene="ybjG"
                     /locus_tag="JN001_003421"
     CDS             4865..5461
                     /gene="ybjG"
                     /locus_tag="JN001_003421"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HAY9054538.1"
                     /translation="MLENLNLSLFSLINATPDSAPWMISLAIFIAKDLITVVPLLAAV
                     LWLWGLTAQRQLVIKIAIALAVSLFVSWTMGHLFPHDRPFVENIGYNFLHHAADDSFP
                     SDHGTVIFTFALAFLCWHRLWSGSLLMVLAVVIAWSRVYLGVHWPLDMLGGLLAGMIG
                     CLSAQIIWQAMGHKLYQRLQSWYRFCFALPIRKGWVRD"
     gene            5519..6277
                     /gene="deoR"
                     /locus_tag="JN001_003422"
     CDS             5519..6277
                     /gene="deoR"
                     /locus_tag="JN001_003422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional repressor DeoR"
                     /protein_id="HAY9054539.1"
                     /translation="METRREERIGQLLQELKRSDKLHLKDAAALLGVSEMTIRRDLNN
                     HSAPVVLLGGYIVLEPHSASHYLLSDQKSRLVEEKRRAAKLAATLVEPDQTLFFDCGT
                     TTPWIIEAIDNEIPFTAVCYSLNTFLALKEKPHCRAFLCGGEFHASNAIFKPIDFQQT
                     LNNFCPDIAFYSAAGVHVSKGATCFNLEELPVKHWAMSMAQKHVLVVDHSKFGKVRPA
                     RMGDLKRFDIVVSDCCPEDEYVKYAQTHRIKLMY"
     gene            complement(6324..7515)
                     /gene="dacC"
                     /locus_tag="JN001_003423"
                     /pseudo
     CDS             complement(6324..7515)
                     /gene="dacC"
                     /locus_tag="JN001_003423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308946.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="serine-type D-Ala-D-Ala carboxypeptidase"
     gene            7809..8387
                     /locus_tag="JN001_003424"
     CDS             7809..8387
                     /locus_tag="JN001_003424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY9054540.1"
                     /translation="MLTLEELELPYEQILAGREFGINHDADFLAMNPNGLVPLLRDDE
                     SDLILWESNAIVRYLAAQYGQKRLWIDSPARRAEAEKWMDWANQTLSNAHRGILMGLV
                     RTPPEERDQAAIDASCKECDALFALLDAELAKVKWFSGDEFGVGDIAIAPFIYNLFNV
                     GLTWTPRPNLQRWYQQLTERPAVRKVVMIPVS"
     gene            complement(8384..9475)
                     /locus_tag="JN001_003425"
     CDS             complement(8384..9475)
                     /locus_tag="JN001_003425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001450075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HAY9054541.1"
                     /translation="MPLICLSSALWAAPATVNVEVLQDKLDHPWALAFLPDNHGMLIT
                     LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD
                     GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENN
                     QRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGARAEIWSYGIRNPQGMAMNPWSN
                     ALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYW
                     KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI
                     RDVRTGPDGYLYVLTDESSGELLKVSPRN"
BASE COUNT         2296 a         2456 c         2342 g         2404 t
ORIGIN      
        1 cggcgcactt catgatgtcg ggtggaaaca ttctggcctt acaaaaaatt ctcggacacc
       61 acgatataaa aatgactatg cgttacgcac atctggcacc ggatcatctg gaaacggcgc
      121 tccgtttcaa tcctctggca acgctgccaa gtggcgacaa agtggcggca gcggttggca
      181 ttaccccgta ataaccacca ctgaccacca acctaactta ttgtttttaa tctaacttat
      241 tgttttcatt aacccgttta cataaatggg ttttttgtta tctaaaattt atctactacc
      301 ctgcaaccct ctcaaccatc ctcaaaatct cctcgcgcga tagcggctta cggtcggtga
      361 caaaatgcag cgtcatcccc tcaataaacg catcaagcgc gcgggcggtt ccgggttcaa
      421 accattgttc gagcgtttgc tgactgcgct gcatccagtt ttgcattacc gtttttaata
      481 gcggttttcg gctagccagc gcgtagagct ggtacatcag ctccatatta tccggcgttg
      541 caacctgtga gctgtagatc atatcggtga tagcctggca tgcgccttga gcatcactaa
      601 catcgctaaa aaatgcctga tattgccggg acataatctc agtaaaactg ctgaacgcct
      661 ccagcaacaa ctcatcaatt cctgaaaaat agtaggtcat cgatcccaac ggtaccccgg
      721 caagggtagc aattttgcgg tgcgtaacag catgtattcc gtaaagtttc accgcctcca
      781 gcgtggcctg gataattttt tctcgccgtt gcggatcgtt agcgcgacgc atgtcatttc
      841 ctctgtctgc aattgtgtac aaatgtacac aaccttgcta atgttgtctt ccctcttctt
      901 attttgacgt gatctatgac cgtaaattct tcacgtaatg cattgaaacg ccgaacctgg
      961 gcgctgttta tgttcttctt tttgccaggc ctgttaatgg cgtcctgggc aacccgtacg
     1021 cctgctatcc gcgatattct ctctgtctcg atcgctgaaa tgggcggtgt tctctttggt
     1081 ctgtcgatcg gttcgatgag cggtattctc tgctcggcgt ggttagtgaa acgctttggg
     1141 acacgtaatg tcatcctggt cacgatgtcc tgcgcattga tcgggatgat gatattaagt
     1201 ctggcactct ggctgacatc gcccctgctc tttgccgttg gtctcggcgt ctttggggca
     1261 agttttggtt ctgcggaagt ggcgataaac gttgaaggtg ccgccgttga gcgagaaatg
     1321 aataaaacgg ttttgccgat gatgcacggt ttttatagcc tgggcacgct ggcaggcgct
     1381 ggtgtcggga tggcactgac ggcctttggc gttccggcaa cggtgcacat tttattggcg
     1441 gcgctggtag gtatcgcgcc tatttatatc gccattcagg caatccctga cggtacgggc
     1501 aaaaatgctg ccgatggcac ccagcatggc gaaaaaggca ttccttttta tcgcgatatc
     1561 cagttgctgt tgattggtgt tgtagtgctg gcgatggcct ttgccgaagg ttctgccaac
     1621 gactggttac ccttattaat ggttgacggt cacggtttta gccctacttc cggctcgctg
     1681 atttatgccg gttttaccct ggggatgacc gttggacgct tcactggcgg ttggttcatc
     1741 gaccgttaca gtcgcgttgc cgtggttcgg gccagtgcac taatgggggc gttgggtatt
     1801 gggctgatta tttttgtcga tagcgcctgg gtcgctgggg tgtctgttgt actctgggga
     1861 ctgggtgcct cgctgggctt cccgctgacc atttctgccg ccagcgatac cggccccgat
     1921 gcaccaaccc gcgtcagtgt ggtagcaacg accggttatc tggctttcct cgtcgggccg
     1981 ccgctgctgg gctatctcgg cgaacattat ggattacgta gtgcaatgct ggttgtactg
     2041 gcgctggtta ttctcgcggc tattgtcgcg aaagccgtcg ccaaacccga taccaaaacg
     2101 cagacggcga tggagaatag ttgatgagca ttaaattaat tgcggtagac atggatggta
     2161 ctttcttaag cgatcaaaaa acctataacc gtgagcggtt tatggctcag tatcagcaaa
     2221 tgaaagcaca aggcattcgc tttgtggtcg ccagcgggaa tcaatattat cagttgatct
     2281 ctttcttccc tgaaattgct aatgaaattg cctttgtggc tgaaaacggc ggctgggtag
     2341 tgagtgaagg caaagatgtt tttaatggcg agctgtcgaa ggatgccttt actactgtcg
     2401 tggaacattt gctgacgcgc ccggaagtgg aaattattgc ctgcggaaaa aatagcgcct
     2461 atacgctcaa aaaatatgac gatgccatga aaacggtggc ggaaatgtat tatcaccgtc
     2521 tggaatacgt tgataacttt gacaacttag aagatatttt ctttaagttt ggcctgaatc
     2581 tttccgatga actgattcca caagtacaaa aagcattaca tgaggccatc ggcgatatta
     2641 tggtgccagt ccacaccggc aacggcagca tcgatctgat tatccccggc gtacataaag
     2701 ccaatggcct tcgccaactg cagaaattat ggggaataga cgacagcgaa gtggtggtct
     2761 ttggcaatgg cggtaacgat attgagatgc tgcgtcaggc aggctttagt tttgcaatgg
     2821 aaaatgccgg cagcgcggtc gtcgcagcgg caaaataccg ggcaggctcc aataaccgtg
     2881 aaggcgtact ggatgtgatc gataaagtgc ttaaacacga agcgccattt gaccaataaa
     2941 aacggcagca cgcccggcaa cacaatacct gaatgaaggc tgcataattc gcggaaatta
     3001 acccgctgca ttatttcagg cgaaatgatt atgaaaaatt gtctactgtt gggcgcgctt
     3061 ttaatgggct ttactggtgt ggcgatggcg caaagtgtca ccgtcgatgt gccgagtgga
     3121 tacaaagtgg ttgtagttcc tgattcagtc agcgttccac aagcggtcag cgtcgcgact
     3181 gtgccgcaaa ccgtctatgt ggctcctgcg ccagctccgg cttaccgccc gcatccttat
     3241 gctcgccatc ttgccagcgt aggtgaaggg atggttatcg aacaccagat tgacgaccat
     3301 caccattaat tcgagaattc ctgatcgcac aaagcagtca ggcatttttt tacccttcgt
     3361 gagaatttcc catctgttta tcttttaaaa agataaccat cagcgacagc cacaaaattc
     3421 cgttgacaag gttgaagaga ttaaactgtc cgttgccccc gttcagccag gcatgtttgc
     3481 tgatttcaat accaacggta aagatcagca tttgcagcat tcccatcgcc gcagaaaccg
     3541 tacctttact catatcgctg gcaaacaggg ttaatcgcac cagtcccgca ttcgccagac
     3601 caataccgaa agcataaata cttaacccgg cagtcatcca taaatacgcg tgcgatgaga
     3661 taaccgttgc cgcagcagcg accaacagac caatcataat cggccagccg cccataatta
     3721 tcagcgaacg tacggtgcgg cgcgaggtca gacgcgctaa cagcaagtta cccgcaatta
     3781 acgccccgaa aataggcact tgcagcaagc catattcata gctgctcaac tgctcgccgg
     3841 taatgatgat aatcggcgac tgggcgatcc acgccagcaa tggcaggcta acgaatccca
     3901 gcgccagcgc ccccgccaca aagcggccgt tcttcagcac cagcttatag tcacgaccga
     3961 gttctttcag tgacagtttc tcgcctatac gcgtggcggt ttcaggcata gctcgttgca
     4021 gaccgaaaaa ggagatcgct gccaatgcgg caaacaaaac aaacatcccc tcccagggca
     4081 gcacatggat ccacgccgcg cccaccagcg gaccaagtag cggagcaatc agcgccacgt
     4141 tcgccatcag cgcggtgatc ttgatacaaa ccgcctcttc gaaagattcc tgaattgcgg
     4201 cgtatcccac agcgccaatg aaacagaggc ttatgccctg caagaagcgc aacagagtga
     4261 attgttcaat gttttgcgcc agtaatattg ccagacaggt gatgataaac cacaccaccc
     4321 ccgccagcat caccggacgg cgaccaatac gatccgacag cggccccagg agccattgta
     4381 aaaacatccc gcccgccaga tatgcggtca ttgaagtagg aacccaatca atgcccgcct
     4441 gatattgttc caccacggcc aacataccgg gttgaatcat atctgccgat ataggttgaa
     4501 aattcgtaaa gcaccagaca gagagggaaa agtaacgcct gacgtccaag cctggcaccg
     4561 gaagctaatt tattttgcat gcaatttctt cgccaataat aatcgcgcag agtttaataa
     4621 aagcgcagct aacgagaaag cgaattttgt agctgaaacc acggttaagc acattcttac
     4681 attattgcga gtatagctac gctttcttta agttttattt aacctatgcc cgttacaatc
     4741 acccaccgta aacaggccgc ttgagggaaa taagacgatg ccgctttacc cagtttaacc
     4801 tgcactttat tctcaacgac ttgcctgtat tggctccctt ttaatcactt tgcgtcggga
     4861 agttatgctg gaaaatttga atctctctct attctctctt attaacgcga cgccagactc
     4921 ggctccgtgg atgatctcgt tggcgatttt tattgctaaa gatttgatta ccgtggtgcc
     4981 gctgctggcc gcggtgcttt ggttgtgggg gcttacagca caacggcaac tggtgataaa
     5041 aatcgctatc gcgctggcgg tcagcctgtt tgtgtcctgg acgatgggac atctttttcc
     5101 gcacgaccga ccctttgtcg aaaatatcgg ctataacttc ctgcatcatg cggcggatga
     5161 ctcattccca agcgaccacg gtacggtgat tttcaccttt gcactggcat ttttatgctg
     5221 gcatcgcctg tggtccggct cacttttaat ggtgctggcc gtcgtcattg cctggtcgcg
     5281 cgtttatctt ggcgtccact ggccgctgga tatgctcggt ggattgctgg caggtatgat
     5341 tggctgcctt agtgcccaga ttatctggca agcgatgggg cataaactct atcaacgtct
     5401 gcaatcgtgg tatcgcttct gttttgcatt accgatccgc aaaggctggg tgcgtgactg
     5461 atctctgcta aaaagtgtag tattgagcgg ctcgcttcaa taactattca gagggattat
     5521 ggaaacacgt cgcgaagagc gtatcgggca gctgctgcaa gaattaaaac gcagcgataa
     5581 gttacatctt aaagacgccg ccgccctgct tggggtttcg gagatgacga ttcgtcgcga
     5641 tctgaacaac cacagtgcgc ccgtcgtttt gctcggcggc tatattgttc tggaaccgca
     5701 tagtgccagc cattacctgt taagcgatca aaaatcccgc ctggtggaag aaaaacgccg
     5761 ggcggcaaaa ctggctgcga cactggtaga acccgatcag accctctttt ttgactgtgg
     5821 caccaccacg ccgtggatta ttgaagcgat tgataatgaa atccctttta ccgccgtttg
     5881 ttattcgcta aatacctttc tggcgctgaa agagaaaccc cattgccgcg catttctgtg
     5941 cggtggtgaa tttcacgcca gcaacgccat tttcaaaccc atcgattttc agcaaacgtt
     6001 gaataatttt tgcccggata tcgcttttta ttccgcggcg ggcgtgcatg tcagtaaagg
     6061 cgctacctgt tttaatcttg aagagttgcc ggtaaaacac tgggccatgt cgatggcgca
     6121 aaagcatgtg ctggttgtcg accacagtaa atttggcaag gtccgtccgg cgcgcatggg
     6181 tgacctgaaa cgctttgata ttgtggtgag tgattgttgc ccggaagatg agtatgtgaa
     6241 gtacgcgcag acgcaccgta ttaagttgat gtattaatga cgtataaccg gatgacgttt
     6301 cgcgccatcc ggttatcaga agattaagag aaccagctgc cgaaccactg atggaatttc
     6361 atcatcacga aatcccacat cctaccaaag aatccgccct cttccacatt ttccatcacg
     6421 atcagcggac gctgctcaat ggatttaccg ttaagctgga aatcaatggt cccgacaacc
     6481 tgaccttttt tcagcggtgc ggtaagctgc ggttccgtta acgtgtagct cgccttcagg
     6541 tttttcagct gcccacgcgg tatggtcact gagcccgctt cgcctgcccc gagattcact
     6601 tcgctcttat caccaaacca gacgcgctga gtcacaaagg tggcatcagg tttaattggc
     6661 gtcacggttt caaagaagcg gaaaccccag gtcaataatt tctcagactc atcggtcagt
     6721 tttcgccccc aacactacgg agattaaacg catatcgccc tgggtagccg aagcaaccag
     6781 attatatccc gcgcctgccg tggttcctgt cttcatgcca tcaacattca gattgctgct
     6841 ccacagcaga cggttacggt taggctgacg aattttgttg aaggtgaact ctttctcttt
     6901 atgaatggcg tactcttccg gcacatcgtg gatcaatgct ttacccagca atgccatatc
     6961 gcgcgcggta ctgaactgcc ccggcgcatc caggccgtgc accgtctgga aggtagtgtt
     7021 ggtcagaccc agttttttgg cataaccatt catcagacca ataaatgact cctggctccc
     7081 ggcaacgtaa tcggccagcg caatacaggc gtcattaccg gactggataa tcacatcttt
     7141 gttcaagtct gccaccgaaa cctgatcgcc cggtttgagg aacattaccg atgaaccacg
     7201 cagtgccgga tttcccgtcg cccaggcatc tttaccgacc gtcaccatat cggtgagttt
     7261 aatcttatcg gccttaagcg cctgcccaac cacatagctg gtcatgattt tagtcaggct
     7321 cgcgggatcc agtttctcat ccgcattgcc ttctgccagc actttaccgc tggcgtaatc
     7381 cattaaaatc catgcacgcg catccacgct cggcgcttca acggtttgtt cggccgcgaa
     7441 tgccgttggg gcaaaaagga ataaaaatgc agaacccgct gcaagaccac gaaggagaga
     7501 ggagtattgc gtcataaatg ccacccgagt atccattcaa aaaaaatacg ttatatcgcc
     7561 gtatgataag ttcggtgatt aataacgcac acacaaactt aaagaaaccg taagttggta
     7621 aagtttttaa agtttatgca atatcctgcc gcttcgctgc ttctggtgtc atttttttgc
     7681 cagctgttgc ttaaaagtta actttacttc accatcggag tcctgttcag cctgtggctg
     7741 cctgtcggaa aaggggtgag tatgattacg ctgtggggtc ggaataattc aaccaacgta
     7801 aaaaagtatt gctgacgctc gaagaactgg aactacctta tgagcaaatt ctcgcgggcc
     7861 gtgagtttgg gataaatcac gatgctgatt ttctggcgat gaaccctaac gggctggtgc
     7921 cgttgttgcg tgacgacgaa agtgatctca ttctttggga atcaaacgcc attgtccgct
     7981 atctggcggc acagtacggg caaaaacgcc tgtggatcga ctcaccggca cgtcgtgcgg
     8041 aagcggaaaa atggatggac tgggcaaacc agacgctcag taatgcccat cgagggatcc
     8101 tgatgggatt agtcagaaca ccaccggaag agcgcgatca ggccgccatt gatgccagtt
     8161 gcaaagagtg cgacgccctg tttgccctgc tcgatgcgga actggcaaaa gtaaaatggt
     8221 tctctggcga cgagtttggt gtgggcgata tcgctatcgc accgttcatc tacaatttgt
     8281 ttaacgttgg cctgacctgg acaccgcgtc caaatctgca acgctggtat cagcaactca
     8341 ctgaacgccc cgcagtgcgc aaagtggtga tgattcccgt tagctaattg cgtgggctaa
     8401 ctttaagtaa ttccccactg gactcgtcgg tgagaacgta taaataaccg tcgggtccag
     8461 tgcgaacatc acgaattcgc tgccctctgt ccgttaaaat acggccatct tctgtcactt
     8521 tgtcgccgtt gacgctcatc acaatgacat ctttatcttt cagcgcgcca ataaataatt
     8581 tttgctgcca ctgggggaat ttatcgctgt tatagaaggc catgccgctc acagcgggcg
     8641 aatctttcca gtaaaaaaca ggttgctcgg tcccggcgac gatctcccct ttcgcttccg
     8701 gtatcttaaa gcctgaatag ttgattcccc aggttgccag cggccagccg tagtttttgc
     8761 ctttttgcgg gatattaatt tcatcaccac cgcgcgggcc atgttcattc agccacagtg
     8821 cattactcca cggattcatc gccattcctt gcggattacg aatgccataa gaccagatct
     8881 cggcgcgcgc accggattcc tttataaaag gattatcatc cgggatttcg ccctgatcgg
     8941 tcagacgcac cagtttgccc tgtaatttat ccagatcctg cgccgtcggg cgctgattgt
     9001 tttcgcccag agcaataaaa agataacctt taccgtcgaa taccagccgc ccgccaaaat
     9061 ggttgccggt agacagtttt ggcatctggc ggaagacggt gcggaagtcg gtcacttttg
     9121 agagatcatc acttaagcgg ccataaccca cagcagttcc ggctttgcca tcatcgccaa
     9181 cttcggaata acttaaccag atgcggcgag actgagcaaa atcaggcgct aaaaccacgt
     9241 ccagcaggcc gccctgcccg tgcgcccaaa cgtccggaac tccggaaagc ggcgcagata
     9301 atccttttcc tgcttgccag tgacgcaact cgccgccgcg cagagtgatt aacataccgt
     9361 gattatcggg taaaaaggcc agtgcccagg gatggtcgag tttgtcttgc agtacttcga
     9421 catttaccgt tgcaggagcc gcccagagag cggaagaaag acaaataagg ggcacaagga
     9481 aaaaggattg tcgatgca
//
LOCUS       DADMJE010000159         9089 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.162, whole genome shotgun sequence.
ACCESSION   DADMJE010000159 DADMJE010000000
VERSION     DADMJE010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9089)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9089)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9089
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.162"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            52..936
                     /locus_tag="JN001_003426"
     CDS             52..936
                     /locus_tag="JN001_003426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707334.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-hexose-6-phosphate mutarotase"
                     /protein_id="HAY9054542.1"
                     /translation="MIKKIFALPVIEQISPVLSRRKLDELDLIVVDHPQVKASFALQG
                     AHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLP
                     WTLKSHHEDADGVALTFELTQSEETKKFCPHDFTLLAHFRVGKTCEIDLESHGEFETT
                     SALHTYFNVGDIAKVSVSGLGDRFIDKVNDAKEDVLTDGIQTFPDRTDRVYLNPQDCS
                     VINDEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETAYASETQK
                     VTKEKPAHLAQSIRVAKR"
     gene            complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JN001_003427"
     CDS             complement(987..1841)
                     /gene="yeaE"
                     /locus_tag="JN001_003427"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal reductase YeaE"
                     /protein_id="HAY9054543.1"
                     /translation="MQQKMIQFSGDVSLPAIGQGTWYMGEDASQRKTEVAALRAGIEL
                     GLTLIDTAEMYADGGAEKVVGEALTGLRDNVFLVSKVYPWNAGRQKAINACEASLRRL
                     NTDYLDLYLLHWSGSFAFEETVAAMEKLIAQGKIRRWGVSNLDYADMQELWQLPGGNQ
                     CATNQVLYHLGSRGIEYDLLPWCQQQQMPVMAYSPLAQAGRLRNGLLKNAVVNEIAHA
                     HNISSAQVLLARVISHQGVMAIPKAATIAHVQQNAAVLEVELSSAELTMLDKAYPAPK
                     GKTALDMV"
     gene            complement(1931..2677)
                     /locus_tag="JN001_003428"
     CDS             complement(1931..2677)
                     /locus_tag="JN001_003428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MltA-interacting protein"
                     /protein_id="HAY9054544.1"
                     /translation="MTKLKLLALGVLIATSAGVAHAEGKFSLGAGVGVVEHPYKDYDT
                     DVYPVPVINYEGDNFWFRGLGGGYYLWNDATDKLSITAYWSPLYFKAKDSGDHQMRHL
                     DDRKSTMMAGLSYAHFTQYGYLRTTLAGDTLDNSNGIVWDMAWLYRYTNGGLTVTPGI
                     GVQWNSENQNEYYYGVSRKESARSGLRGYNPNDSWSPYLELSASYNFLGDWSVYGTAR
                     YTRLSDEVTDSPMVDKSWTGLISTGITYKF"
     gene            3113..5047
                     /gene="yeaG"
                     /locus_tag="JN001_003429"
     CDS             3113..5047
                     /gene="yeaG"
                     /locus_tag="JN001_003429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein kinase YeaG"
                     /protein_id="HAY9054545.1"
                     /translation="MNIFDHYRQRYEAAKDEEFTLQEFLTTCRQDRSAYANAAERLLM
                     AIGEPVMVDTAQEPRLSRLFSNRVIARYPAFEEFYGMEDAIEQIVSYLKHAAQGLEEK
                     KQILYLLGPVGGGKSSLAERLKSLMQLVPIYVLSANGERSPVNDHPFCLFNPQEDAQI
                     LEKEYGIPRRYLGTIMSPWAAKRLHEFGGDITKFRVVKVWPSILQQIAIAKTEPGDEN
                     NQDISALVGKVDIRKLEHYAQNDPDAYGYSGALCRANQGIMEFVEMFKAPIKVLHPLL
                     TATQEGNYNGTEGISALPFNGIILAHSNESEWVTFRNNKNNEAFLDRVYIVKVPYCLR
                     ISEEIKIYEKLLNHSELTHAPCAPGTLETLSRFSILSRLKEPENSSIYSKMRVYDGES
                     LKDTDPKAKSYQEYRDYAGVDEGMNGLSTRFAFKILSRVFNFDHVEVAANPVHLFYVL
                     EQQIEREQFPQEQAERYLEFLKGYLIPKYAEFIGKEIQTAYLESYSEYGQNIFDRYVT
                     YADFWIQDQEYRDPDTGQLFDRESLNAELEKIEKPAGISNPKDFRNEIVNFVLRARAN
                     NSGRNPNWTSYEKLRTVIEKKMFSNTEELLPVISFNAKTSTDEQKKHDDFVDRMMEKG
                     YTRKQVRLLCEWYLRVRKSS"
     gene            5160..6443
                     /locus_tag="JN001_003430"
     CDS             5160..6443
                     /locus_tag="JN001_003430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeaH/YhbH family protein"
                     /protein_id="HAY9054546.1"
                     /translation="MTWFIDRRLNGKNKSMVNRQRFLRRYKAQIKQSISEAMNKRSVT
                     DVDSGESISIPTEDISEPMFHQGRGGLRHRVHPGNDHFVQNDRIERPQGGGGGSGSGQ
                     GQASQDGEGQDEFVFQISKDEYLDLLFEDLALPNLKQNQQRQLTEYKTHRAGYTANGV
                     PANISVVRSLQNSLARRTAMTAGKRRELHALEENLAIISNSEPAQLLEEERLRKEIAE
                     LRAKIERVPFIDTFDLRYKNYEKRPDPSSQAVMFCLMDVSGSMDQSTKDMAKRFYILL
                     YLFLSRTYKNVEVVYIRHHTQAKEVDEHEFFYSQETGGTIVSSALKLMDEVVKERYNP
                     AQWNIYAAQASDGDNWADDSPLCHEILAKKLLPVVRYYSYIEITRRAHQTLWREYEHL
                     QSTFDNFAMQHIRDQDDIYPVFRELFHKQNATAKD"
     gene            6590..8065
                     /locus_tag="JN001_003431"
     CDS             6590..8065
                     /locus_tag="JN001_003431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HAY9054547.1"
                     /translation="MIQSTRISMGLFFKYFLSLTKIDPGQNYISLPSIKSSTHIALLF
                     MVSMGTQKLKAQSFFIFSLLLTLILFCITTLYNENTNVKLIPQMNYLMVVVALFFLNA
                     VIFLFMLMKYFTNKQILPTLILSLAFLSGLIYLVETIVIIHKPINGSTLIQTKSNDVS
                     IFYIFRQLSFICLTSLALFCYGKDNILDNNKKKTGILLLALIPFLVFPLLAHNLSSYN
                     ADYSLYVVDYCPDNHTATRGINYTKILVCLWAFLLFFIIMRTRLASELWPLIALLCLA
                     SLCCNLLLLTLDEYNYTIWYISRGIEVSSKLFVVSFLIYNIFQELQLSSKLAVHDVLT
                     NIYNRRYFFNSVESLLSRPVVKDFCVMLVDINQFKRINAQWGHRVGDKVLVSIVDIIQ
                     QSIRPDDILARLEGEVFGLLFTELNSAQAKIIADRIRKNVELLTGFSNRYDVPEQMTI
                     SIGTVFSTGDTRNISLVMTEADKALREAKSEGGNKVIIHHI"
     gene            8159..8245
                     /locus_tag="JN001_003432"
                     /pseudo
     CDS             8159..8245
                     /locus_tag="JN001_003432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001459804.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            8246..>9089
                     /locus_tag="JN001_003433"
     CDS             8246..>9089
                     /locus_tag="JN001_003433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY9054548.1"
                     /translation="MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQ
                     KADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHK
                     YPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDL
                     NDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQN
                     VMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGREVAK
                     FSVPL"
BASE COUNT         2392 a         2181 c         2108 g         2408 t
ORIGIN      
        1 cttcggtcgc tctttttttt acctgataaa atgaagttaa aggactgcgt catgattaag
       61 aaaatttttg cccttccggt catcgaacaa atctcccctg tcctctcccg tcgtaaactg
      121 gatgaactgg acctcattgt ggtcgatcat ccccaggtaa aagcctcttt tgcattacag
      181 ggcgcacacc ttctctcgtg gaaacctgcg ggtgaagaag aagttctgtg gttgagcaac
      241 aacacaccgt tcaaaaatgg cgtcgctatt cgcggtggcg taccggtttg ctggccgtgg
      301 tttggtccgg cggcacaaca aggtctgcct gcgcacggtt ttgcccgcaa cctgccgtgg
      361 acgctgaaat cacatcatga agatgctgat ggcgtagcgc tgacttttga attgacgcaa
      421 agcgaagaga cgaaaaaatt ctgtccgcac gactttacgc tgttagcgca tttccgcgtg
      481 ggtaaaacct gtgaaatcga tcttgaatca catggcgaat ttgaaaccac ctctgccctg
      541 catacctact ttaacgtggg tgatatcgct aaggtaagcg tcagtgggct gggcgatcgc
      601 ttcattgata aagtgaatga cgcgaaagaa gatgtactga ccgacggtat tcagaccttc
      661 cctgaccgta ccgatcgcgt gtatctgaat ccgcaagatt gcagcgtgat taatgatgaa
      721 gcgctgaatc gtattatcgc cgtaggccac cagcatcatc tgaacgttgt aggctggaac
      781 ccgggaccgg cgctttcaat tagcatgggc gatatgccgg atgatggcta caaaacattt
      841 gtttgtgtag aaacggctta cgcttcagaa acgcaaaaag tcaccaaaga gaaacctgca
      901 catctggcgc aatccattcg cgttgcgaaa cgttaatttg cgttaatgtt gtgtgccggg
      961 tgcgatgcat ccggcacgta tcaacatcac accatatcca gcgcagtttt tccttttggt
     1021 gccggatacg ctttatccag catggttaat tccgctgacg aaagttcgac ctcaagcaca
     1081 gccgcattct gttgaacatg ggcaatcgtg gccgcttttg gaatcgccat cacaccctga
     1141 tggctgatta ccctcgccaa caatacttgt gccgagctga tattgtgagc atgtgcaatt
     1201 tcgttgacta ccgcgttttt taacagtcca ttgcgcaacc gcccggcctg ggctaatgga
     1261 ctgtaagcca tcaccggcat ctgctgttgc tggcaccagg ggagtagatc gtactcaatc
     1321 cctcgtgaac cgagatggta aagcacctga ttagtggcac actgatttcc ccccggcagc
     1381 tgccagagtt cctgcatatc agcataatca aggttagaaa cgccccagcg gcggattttt
     1441 ccctgggcga tcaatttttc catcgctgca acagtctctt caaaagcgaa actgccagac
     1501 cagtgtaata agtagagatc gagataatca gtattgagac ggcgtaaact ggcttcgcat
     1561 gcatttatcg ctttttgcct gccagcattc cacggataga ctttagagac gagaaagacg
     1621 ttatcacgca gaccggttaa tgcttcccca accacctttt cggcaccgcc atcggcatac
     1681 atttcggcgg tatcaatgag ggttaaaccg agctcaatgc ccgcgcgtag tgcagcaact
     1741 tctgttttgc gctgactggc atcttcgccc atataccatg ttccctgccc tatggctggc
     1801 agtgagacat cgccactaaa ttgaatcatt ttttgttgca ttgtttcctc ccaggtattg
     1861 caccaccgta atgcaaaaca gggcgtgacg ccctgttttt atgcacaaaa tgccctggaa
     1921 agatgcatta tcagaatttg taggtgatcc cggtagaaat caggccagtc caggatttat
     1981 ccaccatcgg gctgtcagta acttcatcag acagacgggt atagcgcgcg gtaccgtaaa
     2041 cactccagtc gccgaggaag ttgtagctgg cgctcagctc caggtaaggg ctccagctgt
     2101 cgttcgggtt atagccacgc agaccgctgc gagcggactc tttgcgcgat acgccataat
     2161 agtattcgtt ctggttttcg ctgttccact gcacaccaat acccggagtc acggtcaggc
     2221 caccgttggt gtaacgatac aaccaggcca tatcccagac aatgccgttg ctgttatcca
     2281 gggtatcgcc agccagggtg gtacgcaggt aaccgtactg ggtaaagtga gcataagaca
     2341 gaccagccat catggtgctc ttacggtcat ccaggtgacg catttggtga tcgccactgt
     2401 ctttcgcttt gaagtaaagc ggcgaccagt aagcggtaat tgaaagttta tccgttgcgt
     2461 cattccacag gtagtaacca ccacctaagc cacggaacca gaagttatcg ccttcatagt
     2521 tgattaccgg tactgggtaa acatcggtat cgtaatcttt atatgggtgc tcaacgacac
     2581 ctacgcctgc gcccaaggaa aatttacctt cagcgtgcgc tacgcctgca gacgttgcga
     2641 taagcactcc aagtgccaga agtttgagtt tggtcacaat taatcattcc ttaaacaaat
     2701 gtttagcggg cgacaaagtt tacccgtcaa tacatcgaaa cccaaccttt ttacgttttc
     2761 attttttaaa gtaactgttt aattttcctg ccgcggatga caccgcgctt acagccaaat
     2821 gaatttagcg ttactggcga gcctggtctt tacattaatt atgcaaaatt tatggatgag
     2881 ttgttgatat gccattgaaa ttaagaaagc cgtgcaggca agttttccat ttgccatcta
     2941 cgcttaattt tgaaggtgta tcaccgggca cgttgttctc atcgtcgata aaatggcatg
     3001 agagttgctg tgttttagca agagacgtcg ttcagtttac ctcttccggg aggctctact
     3061 attcatatga acggctctta acctgtgcta aaaaacgaaa ggacggcata ccatgaatat
     3121 attcgatcac tatcgccagc gatatgaagc tgccaaggac gaagagttca cactgcagga
     3181 gtttcttacc acttgtcggc aagatcgcag tgcttatgcc aacgcggctg agcggctatt
     3241 gatggctatc ggtgagcctg tcatggtcga tacagcccag gaacccagac tttctcgact
     3301 cttttctaac cgggtcattg cacgttatcc ggcgtttgaa gagttttacg gcatggaaga
     3361 cgcgattgaa cagattgtct cttatctgaa acacgcggct caggggctgg aagagaagaa
     3421 acaaatcctg tatctgctgg ggcctgtggg tgggggtaaa tcatcgcttg ctgagcgact
     3481 gaaatcatta atgcagctcg taccgattta tgtattgagc gccaacggtg agcgtagccc
     3541 ggtcaacgat catccgttct gtcttttcaa tccgcaggaa gatgcgcaga ttctggaaaa
     3601 agagtatggc attcctcgcc gttatctcgg caccatcatg tcgccgtggg cggcaaaacg
     3661 cctgcatgaa tttggtggcg atatcactaa gttccgggta gtgaaggtct ggccgtcaat
     3721 tctgcaacaa attgctatcg ccaaaacgga acccggcgat gagaacaacc aggacatctc
     3781 cgcgctggtt gggaaagtcg atattcgtaa actcgaacac tacgcgcaga atgacccgga
     3841 cgcctacggc tattccggtg cgctgtgccg cgccaatcag gggatcatgg aattcgttga
     3901 gatgtttaaa gcaccgataa aagtgctgca tcccttgtta accgccactc aggaaggtaa
     3961 ctacaacggg acggaaggta tctccgccct gccgttcaac gggattattc tcgcccactc
     4021 gaacgagtcc gaatgggtca ctttccgtaa taacaaaaac aacgaagcct tcctcgaccg
     4081 tgtttacatc gtgaaggtgc cgtattgctt gcgcatttcc gaagagatca aaatctacga
     4141 gaaattgctt aatcacagtg aattgactca cgccccatgc gcccctggca cgctggaaac
     4201 actgtcacgt ttttccattc tttcgcgcct gaaagagcca gaaaactcca gcatttattc
     4261 aaagatgcgg gtttatgatg gcgaaagtct gaaagacacc gatcccaaag ccaagtcgta
     4321 tcaggaatat cgtgactacg ccggtgtcga tgaagggatg aacggtctgt cgacgcgttt
     4381 tgcgtttaag atcctctccc gcgtgttcaa cttcgatcat gtagaagtgg cggcaaaccc
     4441 ggtccatctg ttctacgtcc tggaacagca gatcgagcgc gagcagttcc cgcaagagca
     4501 ggcagaacgc tatctggagt tcctgaaagg ttatctgatc ccgaaatatg ccgagtttat
     4561 cggcaaagag atccagacgg cctaccttga atcctattcc gaatatgggc aaaacatttt
     4621 cgaccgttat gttacctacg cggatttctg gattcaggat caggagtatc gcgatccgga
     4681 taccgggcag ctgtttgacc gcgagtctct taacgccgag ctggagaaaa tcgagaaacc
     4741 ggcggggatc agtaatccaa aagatttccg caacgagatt gttaacttcg tactgcgcgc
     4801 cagagcgaat aacagcggac gcaatccgaa ctggaccagc tatgaaaaac tgcgcacggt
     4861 tatcgagaag aaaatgttct ccaataccga ggagctgttg ccggttatct cgtttaacgc
     4921 caaaacgtca accgacgagc agaagaaaca cgacgacttt gtcgaccgta tgatggaaaa
     4981 aggctacacc cgtaaacagg tgcgtttact gtgcgaatgg tatttgcgcg tacgtaaatc
     5041 gtcttaacaa ccctggcccg gtacacatgc taccgggcct acaacgacag cgaaccgtgg
     5101 gccagagaaa tggcaacaca ggcgtagcat acagttggca aatgtagtac ggggggcata
     5161 tgacctggtt tattgaccgg cgtctgaacg gcaaaaacaa aagcatggtg aatcgccagc
     5221 gttttttacg ccgttataaa gcgcaaatta aacagtcgat ctccgaggcc atgaataagc
     5281 gttcggtgac tgacgtcgac agcggcgaat ccatatccat tcccacggaa gatattagcg
     5341 aaccgatgtt tcatcagggg cgtggcggcc tgcgccaccg cgtacatccg ggcaatgacc
     5401 atttcgtcca gaacgaccga attgaacgtc cccagggtgg cggcggaggt tccggcagtg
     5461 gtcagggcca ggccagccag gatggtgaag gtcaggatga atttgtcttt cagatttcga
     5521 aagatgagta tcttgatctg ctctttgaag atttggcctt accgaatctg aaacaaaacc
     5581 aacaacgcca gctgaccgaa tataaaacgc atcgggcggg ttataccgct aacggcgttc
     5641 cagccaatat cagcgttgtg cgttccttgc agaactcact ggcgcgacgc acagccatga
     5701 cggcgggcaa gcgacgggaa cttcatgcgc tggaagagaa tttggccatc atcagcaaca
     5761 gtgaacctgc gcaactgctg gaagaggaac gtctgcgcaa agaaattgca gaattacgtg
     5821 ccaaaattga acgcgtccct tttattgaca ccttcgattt acgttacaag aactacgaga
     5881 agcggcccga tccctccagc caagcagtga tgttttgcct gatggacgtt tccggttcaa
     5941 tggatcaatc cactaaagat atggctaagc gtttttatat tctgctgtat ctgttcctca
     6001 gcagaacgta taagaacgtg gaagtcgtat acatccgcca tcatacccaa gcgaaagaag
     6061 tcgatgaaca tgagtttttc tactcgcagg aaacaggcgg caccattgtt tccagcgccc
     6121 tgaaactgat ggatgaggta gtgaaagagc gttataaccc ggcacagtgg aatatttacg
     6181 ctgcacaagc atcggacggc gataactggg ccgatgactc tccgctttgc catgaaatcc
     6241 tggcgaaaaa attattacct gttgttcgtt attacagcta tatcgaaatt acccgtcgtg
     6301 cacatcagac attgtggcga gaatatgagc atctgcaatc tactttcgac aactttgcga
     6361 tgcagcacat ccgcgaccag gatgatattt atccggtgtt ccgtgaactg tttcataaac
     6421 aaaatgcaac agctaaagac taaaactatc agccaggtca ttatcgcctg gctgattttt
     6481 agcttactgt aaattatctc atttattaca tacattagct tacaatcgct ttaaatatga
     6541 cagcataacc tttacataat ttagttccag aaaacaatca ttcggaaaaa tgattcagtc
     6601 aacacgtatt tccatggggt tattctttaa atatttttta tcgttaacga aaattgatcc
     6661 tggtcaaaac tatatatctc tgccatcaat aaaatccagc actcacattg ctctcctttt
     6721 tatggtttct atgggtacac aaaaattaaa agctcaaagc ttttttattt tcagtttatt
     6781 gctgacatta attttatttt gcattactac cttatataac gaaaacacaa atgtaaaact
     6841 catcccacag atgaattacc tgatggttgt tgtggctttg tttttcctta acgccgtcat
     6901 ttttcttttc atgttaatga aatatttcac taacaaacaa attttaccaa cactcatttt
     6961 aagccttgca ttcttaagtg gccttatcta tttagttgaa accattgtaa ttatccataa
     7021 accaattaac ggcagtacac tgatccagac aaagtcgaat gatgtttcta ttttctatat
     7081 tttccgccaa ctcagtttta tttgtttaac ctcgctggca ctcttttgtt atggaaaaga
     7141 caacatcctt gacaacaata agaaaaaaac gggaatcctg ttgctggcgt tgattccttt
     7201 tttagttttt ccccttctgg cacacaatct gagcagttat aacgctgact attctttgta
     7261 tgtcgtcgac tactgtccgg acaaccatac tgcgaccagg ggaatcaact atacaaaaat
     7321 attggtttgt ctgtgggcat ttttactgtt ctttattatc atgcgtacac gattagccag
     7381 cgaactatgg ccgttaatag cattattatg tctggcatcg ctatgctgca acttacttct
     7441 actgactctg gatgagtata attacaccat ctggtatatc agtcgcggga ttgaagtttc
     7501 cagtaaactg tttgttgtgt cttttctgat ttataacatt tttcaggagc tgcaactctc
     7561 cagcaaactg gcagttcatg atgtgctgac caatatttat aatcggcgct actttttcaa
     7621 cagcgtagag tcattattgt cgcgacctgt tgttaaggac ttctgtgtca tgctggttga
     7681 tattaatcag ttcaaacgca tcaatgccca atggggacat cgtgtgggtg ataaagtgct
     7741 ggtttcaatt gtcgatatta tccagcaaag catccgccct gatgatattt tagcgcgact
     7801 ggagggtgag gtgtttggct tgctatttac cgaactcaat agtgcccagg caaaaatcat
     7861 tgcggatcgt atacgtaaaa atgtcgaact cctgaccggc tttagtaaca gatatgatgt
     7921 tcctgaacaa atgaccatca gtattggcac ggttttttca acgggtgaca cgcgtaatat
     7981 ctcgcttgtc atgacggaag cagataaagc cttacgcgaa gcgaaaagcg aggggggcaa
     8041 caaagtgatt attcatcata tttaagtgca aaaatattca gagccatgct ttttgcgtgg
     8101 cttttgcata caatttatta ctattacccc taaatttccc ctccccagcg gcgcagagat
     8161 gagtataatt agcgcccctg tgccaggccg caatcgaact ttatctggtt ttctcgtttc
     8221 actaactgaa ggagtgccat ttatcatgaa attgcaccat agaatgctcc ggcattttat
     8281 cgccgcaagt gtcattgtgc tgacatcttc cttccttatt tttgaacttg tcgccagcga
     8341 cagagcaatg agtgcctatc tgcgctatat cgtgcagaaa gcagactcct cctttcttta
     8401 tgataagtat cagaatcaga gtattgccgc gcatgtgatg cgcgctctcg ctgctgagca
     8461 gtcggaagtg tcgccagaac agcggcgcgc catctgcgag gcttttgagt ctgccaataa
     8521 tacccatggc ttaaacctga ctgctcataa atacccgggc ttacgcggca cactacaaac
     8581 cgcatccact gactgcgaca caattgtgga agctgcagca ctattacccg cttttgatca
     8641 ggcagtggaa ggcaaccgcc accaggatga ttacggttca ggtcttggga tggccgaaga
     8701 gaaatttcac tattatctcg atctcaatga ccgctatgtc tatttttatg agccggttaa
     8761 tgttgaatac tttgcgatga ataactggtc cttcctgcag tcaggaagta ttggtatcga
     8821 tcgcaaagat attgaaaagg tatttaccgg gcgtaccgta ttgtcgagca tttaccagga
     8881 tcagcgtact aaacagaacg tgatgagttt gctgacgccg gtgtatgttg cagggcagct
     8941 aaaagggatt gtgctgctgg atattaacaa aaacaatttg cggaatatct tttacactca
     9001 tgaccgccct ctcctctggc gttttctcaa tgtcacgcta accgataccg attcggggcg
     9061 tgaagtggcc aaattcagtg tgccacttc
//
LOCUS       DADMJE010000160         9067 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.163, whole genome shotgun sequence.
ACCESSION   DADMJE010000160 DADMJE010000000
VERSION     DADMJE010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9067
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.163"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            247..768
                     /locus_tag="JN001_003434"
     CDS             247..768
                     /locus_tag="JN001_003434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HAY9054549.1"
                     /translation="MSDRATTTASLTFESLYGTHHGWLKSWLTRKLQSAFDADDIAQD
                     TFLRVMVSETLSTIRDPRSFLCTIAKRVMVDLFRRNALEKAYLEMLALMPEGGAPSPE
                     ERESQLETLQLLDSMLDGLNGKTREAFLLSQLDGLTYSEIAHKLGVSISSVKKYVAKA
                     VEHCLLFRLEYGL"
     gene            765..1718
                     /gene="fecR"
                     /locus_tag="JN001_003435"
     CDS             765..1718
                     /gene="fecR"
                     /locus_tag="JN001_003435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fec operon regulator FecR"
                     /protein_id="HAY9054550.1"
                     /translation="MNPLLTDSRRQALRSASHWYAVLSGERVSPQQEARWQQWYEQDQ
                     DNQWAWQQVENLRNQLGGVPGDVASRALHDTRLTRRHVMKGLLLLLGAGGGWQLWQSE
                     TGEGLRADYRTAKGTVSRQQLEDGSLLTLNTQSAADVRFDAHQRTVRLWYGEIAITTA
                     KDALQRPFRVLTRQGQLTALGTEFTVRQQDNFTQLDVQQHAVEVLLASAPAQKRIVNA
                     GESLQFSASEFGAVKPLDDESTSWTKDILSFSDKPLGEVIATLTRYRNGVLRCDPAVA
                     GLRLSGTFPLKNTDAILNVIAQTLPVKIQSITRYWINISPL"
     gene            1805..4129
                     /gene="fecA"
                     /locus_tag="JN001_003436"
     CDS             1805..4129
                     /gene="fecA"
                     /locus_tag="JN001_003436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate transport protein FecA"
                     /protein_id="HAY9054551.1"
                     /translation="MTPLRVFRKTTPLVNTIRLSLLPLAGLSFSAFAAQVNIAPGSLD
                     KALNQYAAHSGFTLSVDASLTRGKQSNGLHGDYDVESGLQQLLDGSGLQVKPLGNNSW
                     TLEPAPAPKEDALTVVGDWLGDARENDVFEHAGARDVIRREDFAKTGATTMREVLNRI
                     PGVSAPENNGTGSHDLAMNFGIRGLSPRLASRSTVLMDGIPVPFAPYGQPQLSLAPVS
                     LGNMDAIDVVRGGGAVRYGPQSVGGVVNFVTRAIPQDFGIEAGVEGQLSPTSSQNNPK
                     ETHNLMVGGTADNGFGTALLYSGTRGSDWREHSATRIDDLMLKSKYAPDEVHTFNSLL
                     QYYDGEADMPGGLSRADYDADRWQSTRPYDRFWGRRKLASLGYQFQPDSQHKFNIQGF
                     YTQTLRSGYLEQGKRITLSPRNYWVRGIEPRYSQIFMIGPSAHEVGVGYRYLNESTHE
                     MRYYTATSSGQLPSGSSPYDRDTRSGTEAHAWYLDDKIDIGNWTITPGMRFEHIESYQ
                     NNAITGTHEEVSYNAPLPALNVLYHLTDSWNLYANTEGSFGTVQYSQIGKAVQSGNVE
                     PEKARTWELGTRYDDGALTAEIGLFLINFNNQYDSNQTNDTVTARGKTRHTGLETQAR
                     YDLGTLTPTLDNVSIYASYAYVNAEIREKGDTYGNLVPFSPKHKGTLGVDYKPGNWTF
                     NLNSDFQSSQFADNANTVKESADGSTGRIPGFMLWGARVAYDFGPQMADLNLAFGVKN
                     IFDQDYFIRSYDDNNKGIYAGQPRTLYMQGSLKF"
     gene            4174..5076
                     /gene="fecB"
                     /locus_tag="JN001_003437"
     CDS             4174..5076
                     /gene="fecB"
                     /locus_tag="JN001_003437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418710.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter
                     substrate-binding protein FecB"
                     /protein_id="HAY9054552.1"
                     /translation="MLAFIRFLFAGLLLVISHAFAAMVQDEHGTFTLEKTPQRIVVLE
                     LSFADALAAVDVSPIGIADDNDAKRILPEVRAHLKPWQSVGTRAQPSLEAIAALKPDL
                     IIADSSRHAGVYIALQQIAPVLLLKSRNETYAENLQSAAIIGEMVGKKREMQARLEQH
                     KERMAQWASQLPKGTRVAFGTSREQQFNLHTQETWTGSVLASLGLNVPAAMVGASMPS
                     IGLEQLLAVNPAWLLVAHYREESIVKRWQQDPLWQMLTAAQKQQVASVDSNTWARMRG
                     IFAAERIAADTVKIFHHQPLTVVK"
     gene            5073..6071
                     /gene="fecC"
                     /locus_tag="JN001_003438"
     CDS             5073..6071
                     /gene="fecC"
                     /locus_tag="JN001_003438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-dicitrate ABC transporter permease FecC"
                     /protein_id="HAY9054553.1"
                     /translation="MTAIKHPVLLWGLPIAALIIIFWLSLFCYSAIPVSGADATRALL
                     PGHTPTLPEALVQNLRLPRSLVAVLIGASLALAGTLLQTLTHNPMASPSLLGINSGAA
                     LAMALTSALSPTPIAGYSLSFIAACGGGVSWLLVMTAGGGFRHTHDRNKLILAGIALS
                     AFCMGLTRITLLLAEDHAYGIFYWLAGGVSHARWQDVWQLLPVVVTAVPVVLLLANQL
                     NLLNLSDSTAHTLGVNLTRLRLVINMLVLLLVGACVSVAGPVAFIGLLVPHLARFWAG
                     FDQRNVLPVSMLLGATLMLLADVLARALAFPGDLPAGAVLALIGSPCFVWLVRRRG"
     gene            6068..7024
                     /gene="fecD"
                     /locus_tag="JN001_003439"
     CDS             6068..7024
                     /gene="fecD"
                     /locus_tag="JN001_003439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter permease
                     subunit FecD"
                     /protein_id="HAY9054554.1"
                     /translation="MKIALVIFITLALAGCALLSLHMGVIPVPWRALLTDWQAGREHY
                     YVLMEYRLPRLLLALFVGAALAVAGVLIQGIVRNPLASPDILGVNHAASLASVGALLL
                     MPSLPVMVLPLLAFAGGMAGLILLKMLAKTHQPMKLALTGVALSACWASLTDYLMLSR
                     PQDVNNALLWLTGSLWGRDWSFVKIAIPLMILFLPLSLSFCRDLDLLALGDARATTLG
                     VSVPHTRFWALLLAVAMTSTGVAACGPISFIGLVVPHMMRSITGGRHRRLLPVSALTG
                     ALLLVVADLLARIIHPPLELPVGVLTAIIGAPWFVWLLVRMR"
     gene            7025..7792
                     /gene="fecE"
                     /locus_tag="JN001_003440"
     CDS             7025..7792
                     /gene="fecE"
                     /locus_tag="JN001_003440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe(3+) dicitrate ABC transporter ATP-binding
                     protein FecE"
                     /protein_id="HAY9054555.1"
                     /translation="MTLRTENLTVSYGTDKVLNDVSLSLPTGKITALIGPNGCGKSTL
                     LNCFSRLLMPQSGTVFLGDNPINMLSSRQLARRLSLLPQHHLTPEGITVQELVSYGRN
                     PWLSLWGRLSAEDNARVNVAMNQTRINHLAVRRLTELSGGQRQRAFLAMVLAQNTPVV
                     LLDEPTTYLDINHQVDLMRLMGELRTQGKTVVAVLHDLNQASRYCDQLVVMANGHVMA
                     QGTPEEVMTPGLLRTVFSVEAEIHPEPVSGRPMCLMR"
     gene            complement(8351..8608)
                     /locus_tag="JN001_003441"
     CDS             complement(8351..8608)
                     /locus_tag="JN001_003441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000177060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054556.1"
                     /translation="MTLVNDTGFDPVFSGSIAESWRQQPCTPSYCCDWEAATMLRAFP
                     LAKKGEGRARLPSLYASFGKLGETPTHEDIIDNNRSINWPV"
     gene            complement(8691..9067)
                     /locus_tag="JN001_003442"
                     /pseudo
     CDS             complement(8691..9067)
                     /locus_tag="JN001_003442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611482.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT         1968 a         2591 c         2501 g         2007 t
ORIGIN      
        1 cagcattacc gaaatcccca tcctttaggg cagtgaggat gtcaataata gcagaccaca
       61 tcatgagtca ttctgaccga cacatgccag aagcagatgc tccatcccat tttataccta
      121 ccttataaca cttagaaaaa caacatgtta aaaatgtcta ttggaaacaa ttttatttcc
      181 aattgtaatg ataaccattc tcatattaat atggctacgt gataattaac ttttgatgca
      241 ctccgcatgt ctgaccgcgc cactaccaca gcttccttaa cgttcgagtc gctttatggc
      301 acacatcacg gctggttgaa aagctggctg acgcgcaaac tccagtctgc ttttgatgca
      361 gatgacattg cccaggacac ttttttgcgg gtaatggtca gcgaaacgct ctcgacgatc
      421 cgcgatcctc gctccttcct gtgcactatc gccaaacgcg tgatggtgga cctgtttcgc
      481 cgaaacgcgc tggaaaaagc gtatctggag atgctggcgc ttatgccgga ggggggagcg
      541 ccttcacctg aggaacgcga aagccaactc gagaccctac aactcctcga cagcatgctg
      601 gacgggctaa acggcaaaac acgtgaagcg tttctgcttt cgcaactgga tggtctgaca
      661 tacagcgaga ttgcgcacaa actcggtgtt tccatcagct ccgtgaaaaa atacgtggcg
      721 aaagccgtcg agcactgcct gctgttccgt ctggagtatg ggttatgaat cctttgttaa
      781 ccgattcccg ccgtcaggcg ctgcgttcag cttcccactg gtatgccgtt ctaagcggcg
      841 agcgcgtcag cccacaacag gaagcgcgct ggcaacagtg gtatgaacag gatcaggata
      901 accagtgggc ctggcagcag gttgaaaacc tgcgcaacca gcttggcggt gtgcctggcg
      961 acgttgccag ccgggcgttg cacgataccc gcctcacccg ccgtcacgtg atgaaaggat
     1021 tactgctgtt gctcggcgct ggcggaggct ggcagctctg gcagtcggaa accggcgaag
     1081 gtctgcgggc agattaccgc accgccaaag gcacagtcag ccgtcagcaa ctggaagatg
     1141 gctccctgct cacgctgaat acccaaagcg cggcggatgt gcgttttgat gcgcatcaac
     1201 gcaccgtccg gctctggtac ggtgaaatcg ccattactac cgcgaaagat gccctgcaac
     1261 gccccttccg tgtcctgacc cgtcagggcc agctcactgc tttagggaca gaatttaccg
     1321 tccgccagca ggataatttc acgcagcttg acgtgcagca gcacgctgtg gaagtgcttc
     1381 tcgccagtgc ccccgcgcaa aaacgcatcg tgaacgctgg tgaaagcctg cagttcagcg
     1441 cctctgagtt tggcgcagtg aaaccgctgg atgacgagag tacaagctgg acgaaggaca
     1501 tcctgagctt cagcgataaa ccgctgggtg aggtgatagc cacgctaacc cgttaccgca
     1561 acggcgtgct gcgctgcgat cccgccgttg ccgggctgcg cctgagcggg acgttcccgc
     1621 tgaaaaatac cgatgcgatc ctgaacgtta tcgcgcaaac gcttcccgtt aaaattcagt
     1681 ctattacgcg gtactggata aacatttcac cactgtaagg aaaataattc ttatttcgat
     1741 tgtccttttt acccttctcg ttcgactcat agctgaacac aacaaaaatg atgatgggga
     1801 aggtatgacg ccgttacgcg tttttcgtaa aacaacacct ttggttaaca ccattcgcct
     1861 gagcctgctg ccgctggccg gtctctcgtt ttccgctttt gctgcacagg ttaatatcgc
     1921 accgggatcg ctcgataaag cgctcaatca gtatgccgca cacagcggat ttaccctctc
     1981 ggttgacgcc agcctgacgc gcggcaagca gagcaacggc ctgcacggcg attacgacgt
     2041 cgagagcggc ctgcaacaac tgctggacgg cagcggactg caggtaaaac cgctgggaaa
     2101 taacagctgg acgctggagc ccgcgcccgc accaaaagaa gatgccctga ccgtggtcgg
     2161 cgactggctg ggtgatgcgc gtgaaaacga cgtatttgaa catgctggcg cgcgtgacgt
     2221 gatccgccgt gaggatttcg ccaaaaccgg cgcaaccacc atgcgtgagg tacttaaccg
     2281 catccctggc gtcagcgcgc cggaaaacaa cggcaccggc agccacgacc tggcgatgaa
     2341 ctttggcatc cggggcctga gcccgcgcct cgccagccgc tcgaccgtcc tgatggacgg
     2401 catccccgtc cccttcgccc cttacggtca gccgcagctt tcactggctc ccgtttcgct
     2461 cggcaacatg gatgccattg acgtggtacg cggtggtggt gcggtgcgtt acggaccgca
     2521 gagcgtgggc ggcgtggtga actttgttac ccgtgccatt ccgcaggact ttggtatcga
     2581 ggcgggcgtg gaaggtcagc tcagcccaac ctcttcacaa aacaacccga aagagacgca
     2641 caacctgatg gtgggcggca cagcggacaa cggttttggc accgcgctgc tctactccgg
     2701 cacgcgcggc agtgactggc gcgagcacag cgccacccgc atcgacgacc tgatgctgaa
     2761 aagcaaatat gcgccggatg aggtgcacac cttcaacagc ctgctgcaat attacgacgg
     2821 tgaagccgac atgcccggtg gcctgtctcg cgcggattac gacgccgatc gctggcaatc
     2881 cacccgcccg tatgaccgct tctggggtcg tcgcaagctg gcgagcctgg gctaccagtt
     2941 ccagccagac agccagcata aattcaacat tcaggggttc tacacccaaa ccctgcgcag
     3001 cggctacctg gagcaaggca aacgcatcac cctctcgccg cgtaactact gggtgcgcgg
     3061 tattgagcca cgctacagcc agatctttat gatcggccct tccgcgcacg aagtgggcgt
     3121 gggctatcgc tatttgaatg aatcaacgca tgaaatgcgt tactacaccg ccaccagcag
     3181 cgggcagttg ccgtccggct caagccctta cgaccgcgat acgcgttccg gcaccgaggc
     3241 gcacgcctgg tatctggatg acaaaatcga catcggcaac tggaccatca cgccgggtat
     3301 gcgtttcgaa catatcgagt cataccagaa caacgccatc acaggcacgc acgaagaagt
     3361 gagctataac gcaccgcttc cggcgttgaa cgtgctctat cacctgactg acagctggaa
     3421 tctttatgca aacactgaag gctcgttcgg caccgtacag tacagccaga ttggcaaggc
     3481 tgtgcaaagc ggcaatgtgg aaccggaaaa agcgcgaacc tgggaactcg gtacccgcta
     3541 cgacgacggc gcgctgacgg cggaaatagg gctgttcctg attaacttta acaatcagta
     3601 cgactccaac cagaccaacg acaccgtcac tgcacgtggc aaaacgcgcc ataccgggct
     3661 ggaaacgcag gcacgttacg atctgggtac gctaacgcca acgcttgata acgtttccat
     3721 ctacgccagc tatgcgtatg tgaacgcgga aatccgcgag aaaggcgaca cctacggcaa
     3781 tctggtacca ttctccccga aacataaagg cacgctgggc gtggactaca agccaggaaa
     3841 ctggacgttc aatctgaaca gcgatttcca gtccagccag tttgcggata acgccaatac
     3901 ggtgaaagag agcgccgacg gcagtaccgg ccgcattccc ggcttcatgc tctggggcgc
     3961 acgcgtggcg tatgactttg gcccgcagat ggcagatctg aacctggcat tcggtgtgaa
     4021 aaacatcttc gaccaggact acttcatccg ctcttatgac gacaacaaca aaggcatcta
     4081 tgcaggccag ccgcgcacgc tgtatatgca ggggtcgttg aagttctgat gtgttaacgc
     4141 ccggcttgcc gggcttttag ctggaatgtg attatgttgg catttatccg ttttcttttt
     4201 gcaggcctgc tgctggtgat cagccacgcc tttgccgcca tggttcagga cgaacacggc
     4261 acgtttacac tcgaaaaaac gccacaacgg attgtggtgc tggaactctc gttcgccgat
     4321 gcgctggccg ccgtggacgt cagcccgatc ggtattgccg acgataacga tgcaaaacgc
     4381 atcctgcccg aagtgcgtgc gcacctgaaa ccgtggcagt ccgtcggaac gcgcgcgcag
     4441 ccgagcctgg aagccattgc cgctctgaaa ccagacctga tcattgccga cagcagtcgc
     4501 catgcggggg tttacatcgc cttgcagcaa atcgcgccgg tactgctgct taagtcccgc
     4561 aacgaaacct acgctgaaaa tttgcaatct gcggctatca tcggcgaaat ggtgggtaaa
     4621 aagcgagaga tgcaggcacg tctggaacaa cataaagaga ggatggcgca gtgggccagc
     4681 cagcttccca aagggacacg cgtggccttt ggcacatcac gcgaacagca attcaacctg
     4741 catactcagg agacctggac cggcagcgtg ctggcctctc tggggctgaa cgttcccgct
     4801 gcgatggtgg gtgcgtccat gccgtccatc ggcctggagc aactgctggc ggtcaatcct
     4861 gcctggctgc tggttgccca ctatcgcgaa gagagcattg ttaaacgctg gcaacaagat
     4921 ccgctctggc agatgttaac cgccgcgcag aagcagcagg ttgcttcggt cgacagtaac
     4981 acctgggcgc ggatgcgcgg tatttttgct gcagagcgta ttgccgctga cacggtaaaa
     5041 atcttccacc atcagccgct taccgttgtg aaatgaccgc gataaaacac ccggtgctgc
     5101 tgtgggggct tcccattgca gcacttatta ttattttctg gctgagtctg ttttgctact
     5161 cggccattcc tgtttccgga gcagatgcaa cccgcgccct gctgcctgga cacacgccaa
     5221 cgctaccaga agcgctggtg caaaaccttc gtttgccacg aagcctggtc gccgttctga
     5281 tcggcgcaag cctggcgctc gcgggcacgc tgctgcaaac cctgacccac aacccaatgg
     5341 cctctccttc actgctcggc attaacagcg gcgcggcgct ggctatggcg cttaccagcg
     5401 cgctaagtcc gacgccgatt gcaggctatt ctctgtcgtt catcgcggca tgcgggggcg
     5461 gcgtgagctg gctgctggtc atgaccgcag gaggcggatt tcgtcatacc catgacagaa
     5521 acaaactgat cctcgcgggt atcgcgctgt cggccttttg tatgggcctt acccgcatca
     5581 ccctgctgct ggccgaagat catgcttacg gcatctttta ctggctggca ggcggagtgt
     5641 cccacgcccg ctggcaggat gtctggcagc tcttgccggt ggtggtcact gcagtccctg
     5701 tcgtgttgct gctggcgaat caactgaacc tgctcaacct cagcgacagc accgcccata
     5761 cgctgggagt gaacctgacg aggctacgtt tggtcatcaa tatgttagtg ctgcttctgg
     5821 ttggtgcgtg cgtcagcgtg gcaggtccgg tggcgtttat cggtctgctg gtgccacatc
     5881 tggcgcgctt ctgggcaggc ttcgatcagc gcaacgtact gccagtgagc atgctgctgg
     5941 gggccacgct gatgctgctg gcagatgtac tcgcacgcgc gctggccttc cccggagatc
     6001 tgcccgcagg cgcagtgctg gcgctgattg gcagcccttg ctttgtctgg cttgtgagga
     6061 ggcgaggatg aaaattgcgc tggttatttt catcaccctt gccctggcgg gctgtgcgct
     6121 gttatcactc catatgggag tgatccccgt gccgtggcgc gcgctgctga ccgactggca
     6181 ggccggacgc gagcattatt atgtattgat ggagtaccga ctgccgcgct tgctgctggc
     6241 actgtttgtc ggtgcagccc tcgccgtggc gggcgtgctg atacagggga ttgtgcgcaa
     6301 ccctctggca tcaccggata ttctcggcgt taaccatgcc gccagcctgg cctctgtggg
     6361 ggctctactt cttatgccgt cactgcccgt gatggtgctg ccgctgctgg cctttgcggg
     6421 cggcatggcg gggttgatat tactgaagat gctggcaaag acccaccagc cgatgaagct
     6481 ggcgctcacc ggcgtggcgc tttctgcatg ctgggccagc ctgacggatt atctgatgct
     6541 ctcgcgccca caggatgtga acaacgccct gctgtggctg accggcagct tatggggccg
     6601 tgactggagc tttgtgaaga ttgccatccc gctgatgatt ttatttctgc cgctgagcct
     6661 gagtttttgc cgcgatctcg acctccttgc actcggcgat gcgcgcgcca ccacgctcgg
     6721 tgtgtcggtg ccccataccc gattctgggc tttgttacta gctgtcgcca tgacatctac
     6781 cggcgtggcc gcctgcggcc cgattagctt tattggtctc gtggtgccgc atatgatgcg
     6841 tagcatcacc ggtggacgtc accgcagact gctgcctgtt tcagccctga caggtgcgtt
     6901 gctgttggtg gttgccgatc tgctggcgag aattattcat cccccactgg agctcccggt
     6961 tggcgtgctg accgccatta tcggtgcgcc gtggtttgtc tggttgcttg tgagaatgcg
     7021 ataaatgact ttacgaactg aaaatctgac ggtcagttac gggacagaca aggtacttaa
     7081 cgacgtttca ctctcactgc caacggggaa gatcaccgcc ctgatcggtc ctaacggttg
     7141 cgggaaatcg acgctgttaa actgtttttc gcggctttta atgccgcagt ctggcaccgt
     7201 atttctcggc gataatccca taaatatgct ctcatcgcgc cagttggccc gcaggctttc
     7261 gctgctgcct cagcaccatt taacgccaga ggggatcaca gtccaggagc tggtttcgta
     7321 tggtcgtaat ccctggctgt cactctgggg gcgtctctcc gctgaagaca atgcacgagt
     7381 taatgtcgcc atgaaccaga cccggatcaa tcatcttgcc gttcgtcggt taaccgagct
     7441 ttccggcggt cagcgccagc gcgcatttct ggcgatggtc ctggcccaga atacgcccgt
     7501 tgtattactt gatgagccaa ccacctatct tgatatcaat caccaggtgg acctgatgcg
     7561 gttgatgggc gaactccgga ctcaggggaa aacggtggtc gctgtgctgc acgaccttaa
     7621 tcaggctagc cggtactgcg atcaactggt ggtaatggca aacggacatg ttatggcgca
     7681 aggcacacca gaagaggtga tgaccccagg attgctgaga acagtattca gcgtggaagc
     7741 ggaaatacac cccgagccgg tatctggcag gccgatgtgc ctaatgaggt agattgcaca
     7801 ggccgtaaga accaaaccac gactgaatga aactggactg gcgccagcaa gcctgttcag
     7861 actggggctg aacttttccg gactctgaaa gattaccaat actcatcgtc catccgcttg
     7921 ctttaggctg acaggttcat aattaacgca aaccagagct gtacaggctt gggcgcggct
     7981 ttcaaaccaa tcgtgatcac ggcaatcaat tttgaactct gcttaacgga catttctgta
     8041 taacccttac ggcaacgaaa aacgcgaagt taaaatttta gaaacccaaa aacgtgacat
     8101 gactaagttt agatttcagg ggggggagat caaaaaattt cgctctgtgc cagagcggac
     8161 attcacggag ctggttcatt accaatgagg ttgggctttt gaggataaat caatgatcag
     8221 acgccaacgt aaatcaaaag caaccctgga acggaattgc taatccagtt tctgaccatc
     8281 gatttttcta aaaagtgtgc gtttgctact acttaggtag gtgcagcttt cttaatcacc
     8341 ggcagccacg ttatacaggc cagttgatgg atcgattgtt atcaatgata tcttcatgag
     8401 tcggtgtctc acccagctta ccgaagctgg cataaagtga aggcagacgg gcccgtcctt
     8461 ctcccttttt cgccagaggg aaagcgcgaa gcatggtggc agcctcccag tcacaacaat
     8521 aggatggtgt gcacggctgc tgacgccatg attcagcgat agagccggaa aatacggggt
     8581 caaagccggt atcattaacc agagtcatcg tgacctgtac tgcggctgga tgatctcctg
     8641 ctactgcaac tgctaggcga ccgcggctcc cttcaggtag tctgttgtgg tcaactaaaa
     8701 ctggcctccg cgttagagtt tttccagtat cggttttctg attcgtttgg tggtaaccca
     8761 ccattatatt cgtgcggtct tagtgcgctg taatatccaa cgatatagtc cgttattgcg
     8821 tgagctgcat cgctgaagct tacatagccc gtcgctggca cccattcgtt cttcagactc
     8881 ctgaagaagc gctccattgg gctgttatcc cagcagtttc cacgccgact catactctgc
     8941 ctgatccggt atcgccacag taactgccgg aactgcctgc tcgtataatg actgccttga
     9001 tcgcctggaa catcaccccg acgggcttac cacgggtttc ccatgccatt tccagtgctt
     9061 tcatggt
//
LOCUS       DADMJE010000161         9045 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.164, whole genome shotgun sequence.
ACCESSION   DADMJE010000161 DADMJE010000000
VERSION     DADMJE010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 9045)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9045)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9045
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.164"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            195..1028
                     /gene="ppsR"
                     /locus_tag="JN001_003443"
     CDS             195..1028
                     /gene="ppsR"
                     /locus_tag="JN001_003443"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="posphoenolpyruvate synthetase regulatory
                     kinase/phosphorylase PpsR"
                     /protein_id="HAY9054557.1"
                     /translation="MDNAVDRHVFYISDGTAITAEVLGHAVMSQFPVTISSITLPFVE
                     NESRARAVKDQIDAIYHQTGVRPLVFYSIVLPEIRAIILQSEGFCQDIVQALVAPLQQ
                     EMKLDPTPIAHRTHGLNPNNLNKYDARIAAIDYTLAHDDGISLRNLDQAQVILLGVSR
                     CGKTPTSLYLAMQFGIRTANYPFIADDMDNLVLPASLKPLQHKLFGLTIDPERLAAIR
                     EERRENSRYASLRQCRMEVAEVEALYRKNQIPWINSTNYSVEEIATKILDIMGLSRRM
                     Y"
     gene            1184..2230
                     /gene="aroH"
                     /locus_tag="JN001_003444"
     CDS             1184..2230
                     /gene="aroH"
                     /locus_tag="JN001_003444"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroH"
                     /protein_id="HAY9054558.1"
                     /translation="MNRTDELRTARIESLVTPAELALRYPVTPGVATHVTDSRRRIEK
                     ILNGEDKRLLVIIGPCSIHDLTAAMEYATRLQSLRNQYQSRLEIVMRTYFEKPRTVVG
                     WKGLISDPDLNGSYRVNHGLELARKLLLQVNELGVPTATEFLDMVTGQFIADLISWGA
                     IGARTTESQIHREMASALSCPVGFKNGTDGNTRIAVDAIRAARASHMFLSPDKNGQMT
                     IYQTSGNPYGHIIMRGGKKPNYHADDIAAACDTLHEFDLPEHLVVDFSHGNCQKQHRR
                     QLEVCEDICQQIRNGSTAIAGIMAESFLREGTQKIVGGQPLTYGQSITDPCLGWEDTE
                     RLVEKLASAVDTRF"
     gene            2362..2553
                     /gene="hemP"
                     /locus_tag="JN001_003445"
     CDS             2362..2553
                     /gene="hemP"
                     /locus_tag="JN001_003445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin uptake protein HemP"
                     /protein_id="HAY9054559.1"
                     /translation="MRYTDSRKLTPETDANHKTASPQPIRRITSQTLLGPDGKLIIDH
                     DGQEYLLRKTQAGKLLLTK"
     gene            complement(2557..3993)
                     /locus_tag="JN001_003446"
     CDS             complement(2557..3993)
                     /locus_tag="JN001_003446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiU family protein"
                     /protein_id="HAY9054560.1"
                     /translation="MTLSFVTRWRDELPETYTALSPTPLNNARLIWHNIELANTLSIP
                     SSLFKNGAGVWGGEALLPGMSPLAQVYSGHQFGVWAGQLGDGRGILLGEQLLADGTTM
                     DWHLKGAGLTPYSRMGDGRAVLRSTIRESLASEAMHYLGIPTTRALSIVTSDSPVYRE
                     TAEPGAMLMRVAPSHLRFGHFEHFYYRRESEKVRQLADFAIRHYWSHLEDDEDKYRLW
                     FSDVVARTASLIAQWQTVGFAHGVMNTDNMSLLGLTLDYGPFGFLDDYEPGFICNHSD
                     HQGRYSFDNQPAVALWNLQRLAQTLSPFVAVDALNEALDSYQQVLLTHYGQRMRQKLG
                     FMTEQKEDNALLNELFSLMARERSDYTRTFRMLSLTEQHSAASPLRDEFIDRAAFDDW
                     FARYRGRLQQDEVSDSERQQLIQSVNPALVLRNWLAQRAIEAAEKGDMMELHRLHEAL
                     RNPFSDRDDDYVSRPPDWGKRLEVSCSS"
     gene            complement(4056..4769)
                     /gene="ydiV"
                     /locus_tag="JN001_003447"
     CDS             complement(4056..4769)
                     /gene="ydiV"
                     /locus_tag="JN001_003447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-FlhDC factor"
                     /protein_id="HAY9054561.1"
                     /translation="MKIFLENLYHSDCYFLPIRDNQQVLVGVELITHFSSEDGTVRIP
                     TSRVIAQLTEEQHWQLFSEQLELLKSCQHFFIQHKLFAWLNLTPQVATLLLERDNYAG
                     ELLKYPFIELLINENYPHLNEGKDNRGLLSLSQVYPLVLGNLGAGNSTMKAVFDGLFT
                     RVMLDKSFIQQQITHRSFEPFIRAIQAQISPCCNCIIAGGIDTAEILAQITPFDFHAL
                     QGCLWPAVPINQITTLVQR"
     gene            complement(5015..5479)
                     /locus_tag="JN001_003448"
     CDS             complement(5015..5479)
                     /locus_tag="JN001_003448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
                     /protein_id="HAY9054562.1"
                     /translation="MRFCLILITALFLAGCSHHKAPPPNARLSDSITVIAGLNDQLQS
                     WHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDKLLPGDL
                     VFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI"
     gene            complement(5557..6306)
                     /gene="btuD"
                     /locus_tag="JN001_003449"
     CDS             complement(5557..6306)
                     /gene="btuD"
                     /locus_tag="JN001_003449"
                     /EC_number="7.6.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter ATP-binding protein
                     BtuD"
                     /protein_id="HAY9054563.1"
                     /translation="MSIVMQLQDVAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLA
                     RMAGMTSGKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFAMPVWHYLTLHQHDKT
                     RTELLNDVAGALALDDKLGRSTNQLSGGEWQRVGLAAVVLQITPQANPAGQLLLLDEP
                     MNSLDVAQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRRE
                     EVLTPPNLAQAYGMNFRRLDIEGHRMLILTI"
     gene            complement(6306..6857)
                     /gene="btuE"
                     /locus_tag="JN001_003450"
     CDS             complement(6306..6857)
                     /gene="btuE"
                     /locus_tag="JN001_003450"
                     /EC_number="1.11.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional thioredoxin/glutathione peroxidase"
                     /protein_id="HAY9054564.1"
                     /translation="MQDSILTTVVKDIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYE
                     QLENIQKAWADRGFVVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGE
                     GRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGLVIQ
                     RFSPDMTPEDPIVMESIKLALAK"
     gene            complement(6920..7900)
                     /gene="btuC"
                     /locus_tag="JN001_003451"
     CDS             complement(6920..7900)
                     /gene="btuC"
                     /locus_tag="JN001_003451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="vitamin B12 ABC transporter permease BtuC"
                     /protein_id="HAY9054565.1"
                     /translation="MLTLARQQQRQNIRWLLCLSVLMLLALLLSLCAGEQWISLGDWF
                     TPRGELFVWQIRLPRTLAVLLVGAALAISGAVMQALFENPLAEPGLLGVSNGAGVGLI
                     AAVLLGQGQLPNWALGLCAIAGALIITLILLRFARRHLSTSRLLLAGVALGIICSALM
                     TWAIYFSTSVDLRQLMYWMMGGFGGVDWRQSWLMLALIPVLLWICCQSRPMNMLALGE
                     ISARQLGLPLWFWRNVLVAATGWMVGVSVALAGAIGFIGLVIPHILRLCGLTDHRVLL
                     PGCALAGASALLLADIVARLALAAAELLIGVVTATLGAPVFIWLLLKARR"
     gene            complement(8109..8438)
                     /locus_tag="JN001_003452"
     CDS             complement(8109..8438)
                     /locus_tag="JN001_003452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000997174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054566.1"
                     /translation="MNDDLERRVSCLESDVTEIKNNLITLTTRSESFATKSDVLEIRE
                     GLRLEMAESRQSLKSEMADLRQSLKVEMAEHRTELQKSFANQTWLLTGIVLSAMAVLV
                     AVVTVIK"
     gene            complement(8546..8908)
                     /locus_tag="JN001_003453"
     CDS             complement(8546..8908)
                     /locus_tag="JN001_003453"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054567.1"
                     /translation="MKFHLDELKRMATLDNFARFLNESSTNEKCLSCGDTDMYMYLTN
                     IVEVGPEPKTAEECDLGTFVMLDYIGPFTGYPGYEGHDRENIHNYEFRLTCNRCGFVH
                     RYSARAFMNWVGKQGDEK"
BASE COUNT         2389 a         2395 c         2051 g         2210 t
ORIGIN      
        1 gttgcgcaaa cctgctctat tcgacaattt ccacataaac catcggtata aacgaaacca
       61 taaaaatgaa atgctgtttt cataaaaaat aaaattgaag gttcatttta taaaccagac
      121 attacctcct acgcttctgt gcgtttttaa tttatgcttt catagaatta tgtctgcatc
      181 acgggaagaa caaaatggat aatgctgttg atcgccacgt tttttatatt tctgatggta
      241 cggcaataac tgcggaggta ttaggacacg cagtaatgtc acaatttccc gtcactatca
      301 gcagcattac gctgccgttt gtcgaaaatg agagccgtgc acgggcagtg aaggatcaga
      361 ttgacgcaat ttatcaccag acaggtgtgc gcccgctggt cttctactcc atcgtgttgc
      421 cggagattcg cgccatcatc ttgcaaagtg aaggcttttg ccaggatatc gttcaggcgc
      481 tggttgcccc gctacaacaa gagatgaaac tggatccaac gccgattgct catcgtaccc
      541 atggccttaa ccctaataat ctcaataaat atgatgcgcg cattgcggcg attgattaca
      601 cccttgccca cgatgacggc atttcgttgc gcaatctgga tcaggctcag gtgatcctgc
      661 tcggtgtttc tcgctgtggt aaaaccccca ccagtctgta tctggcaatg caatttggta
      721 tccgcacggc aaactacccc tttattgccg acgatatgga taatctggtg ctacccgcgt
      781 cgctcaaacc gcttcagcat aaattgttcg gcctgactat cgacccggaa cgtctggcgg
      841 cgattcgcga ggaacgtcgg gagaacagtc gctatgcctc gcttcgtcag tgcagaatgg
      901 aagtcgcgga agtggaagcc ttgtaccgta aaaatcagat cccgtggatt aacagtacca
      961 attattcggt agaagagatt gccaccaaga tcctcgatat catgggcctt agtcgccgaa
     1021 tgtactagag aactagtgcg ctggtttgtt ttttgttatc atgctaacca cccggcgagg
     1081 tgtgacacac ctcgcacttg aaatcagctg cgattggttt atcgtgatgc gcatcacttc
     1141 ccggtagtcc tgccgtagaa gcaacaaatt tctgagactt gtaatgaaca gaactgacga
     1201 actccgtact gcgcgtattg agagcctggt aacgcccgcc gaactcgcgc tacggtatcc
     1261 cgtaacgcct ggcgtcgcca cccatgtcac cgactcccgc cgcagaattg aaaaaatact
     1321 gaatggtgaa gataagcgac tgttggtcat tattggcccc tgctcgatcc acgatctcac
     1381 cgctgcaatg gagtacgcca cccgtctgca gtcgctgcgc aaccagtacc agtcacggct
     1441 ggaaatcgta atgcgcacct attttgaaaa accacgaact gttgtcggct ggaaagggct
     1501 aatctccgat ccggatttaa acggcagcta tcgggtaaat cacggtctgg agctggcgcg
     1561 caaattactt ttacaggtaa atgagctggg tgtccctacc gcgactgagt ttctcgatat
     1621 ggtgaccggt cagtttattg ctgatttaat cagttggggc gcgattggcg ctcgtactac
     1681 cgaaagtcag atccaccgcg aaatggcttc agcactctcc tgtccggtag gttttaaaaa
     1741 tggtaccgat ggcaacacgc ggattgccgt ggatgctatc cgcgcagccc gcgccagcca
     1801 tatgttcctc tcgccagaca aaaatggtca gatgaccatc tatcagacca gcggcaaccc
     1861 gtatggccac attattatgc gtggcggcaa aaaaccgaat tatcatgccg atgatatcgc
     1921 cgcagcctgc gatacgctgc acgagtttga tttacctgaa catctggtgg tggatttcag
     1981 ccacggtaac tgccagaagc agcaccgtcg ccagttagaa gtttgtgagg atatttgtca
     2041 gcaaatccgc aatggctcta cggcgattgc tggaattatg gcggaaagtt tcctgcgcga
     2101 aggaacgcaa aaaatcgtcg gcggtcagcc gctcacttac ggtcaatcca ttaccgaccc
     2161 gtgtctgggc tgggaagata ccgaacgcct ggtcgaaaaa ctcgcctctg cggtagatac
     2221 ccgcttctga atgcgtgccc attcctgatg ggatgggcat ttctgcgcaa cttgttgtct
     2281 tctcaacaca ttactgcttg ctctggcctg ccataatatt gataataaga atcattgtta
     2341 tatcaattat tattaatttt tatgcgttat acggatagca gaaaactcac gcctgaaacg
     2401 gatgccaatc acaagaccgc ttccccgcag cccatccggc gaattaccag ccagacactg
     2461 ttaggtccgg atggcaaact gattatcgat catgacgggc aagaatatct gctccgtaaa
     2521 actcaggctg gcaagctgct gttaactaag tagcctttaa ctcgagcagc tgacttccag
     2581 ccgtttaccc cagtcaggtg gacgactgac atagtcatca tctctgtcgc tgaaaggatt
     2641 tcgcaacgcc tcatgcaggc ggtgcaattc catcatatca cccttttctg ccgcttcaat
     2701 cgcccgttgc gccaaccagt tgcgcaatac cagagctggg ttaacgcttt gtatcagttg
     2761 ctgacgctca ctatcgctaa cctcgtcttg ttgcaaacgc ccccgataac gggcaaacca
     2821 gtcatcaaat gccgcacgat caataaactc atcacgtagc ggtgacgccg cgctgtgctg
     2881 ctcggtcaga ctcagcatgc ggaatgtgcg ggtataatcg ctgcgctctc gcgccatcag
     2941 actgaataat tcattcagta gcgcgttatc ctctttttgc tccgtcatga agcccagttt
     3001 ctgccgcatc cgttgtccat aatgcgtcaa caaaacctgc tgatagctgt ccagggcctc
     3061 attcagggca tctacggcaa caaatggtga caatgtctgc gccagacgct gtaaattcca
     3121 caacgcgaca gcaggttgat tatcaaagct ataacgccct tgatgatccg agtgattaca
     3181 aataaaaccg ggttcgtaat catcaagaaa accaaacggc ccgtaatcaa gcgtcagtcc
     3241 cagcagcgac atgttgtcgg tattcatcac cccatgtgca aagccgaccg tctgccattg
     3301 ggcaattaac gacgcggtac gtgcgacaac atcgctaaac cagagacggt atttgtcctc
     3361 atcatcttca agatgtgacc agtaatgacg aatagcaaag tcagctaact gacgaacctt
     3421 ttccgactcg cggcggtagt aaaaatgttc gaaatgacca aagcgcagat gacttggtgc
     3481 cacacgcatc agcatcgcgc ctggctccgc cgtttcccga tacactggcg aatcgctggt
     3541 gacgatactt aacgcgcggg tcgtcggaat gcccagataa tgcatcgcct cactggcgag
     3601 actttctcgt atcgtcgaac gtaaaaccgc ccgtccatca cccattcgcg aataaggcgt
     3661 caggccagca cctttcagat gccagtccat tgtagtgcca tcagcaagca gttgttcgcc
     3721 gagtaaaatg ccgcgcccat cacccagttg gcccgcccag acgccgaact gatgaccact
     3781 gtaaacctgc gccagtggtg acataccagg cagtagggct tcgccgcccc agacacctgc
     3841 gccattttta aacagcgacg atggaatact cagcgtgtta gccagttcga tattatgcca
     3901 aatcagccgg gcattattta aaggcgtagg ggaaagtgct gtataggttt ctggcaattc
     3961 atcgcgccag cgggtaacaa aagacagggt catagatcct cctgtttgat agtgtagacg
     4021 gttactctcg tcttaaacac cagcaaacag aagggttatc gctgaaccaa cgtcgttatc
     4081 tgatttatgg gaacggcagg ccacaggcat ccctggagag catggaaatc gaagggggta
     4141 atctgtgcca atatttctgc cgtatcaatg cctcccgcaa tgatgcaatt gcaacaaggg
     4201 gaaatttgcg cctggatcgc acgaataaac ggttcgaagg agcggtgcgt gatttgttgc
     4261 tgaataaaac ttttatccag catgacgcgg gtgaaaagac catcaaaaac cgctttcatt
     4321 gtgctattgc ctgctcccaa attacctaac acaaggggat acacttgcga taaggataaa
     4381 agaccgcgat tatcttttcc ttcattgaga tgcgggtaat tctcattaat caacagttca
     4441 ataaacggat attttaatag ttcgcctgcg taattatccc tctctaataa taatgtagcc
     4501 acttgtggcg ttaaattaag ccaggcaaag agtttatgtt gaataaaaaa atgttggcat
     4561 gattttagta attccaactg ctctgaaaat aattgccaat gttgctcctc ggtaagttgc
     4621 gctataaccc gactcgtcgg gatacgcacc gtgccatctt cactggagaa atgggtaatt
     4681 aactcaacgc cgacaaggac ttgctggtta tctcttatcg gcaggaaata gcaatcagaa
     4741 tgataaagat tctccaaaaa aatcttcatg gtaaccgtcc ctctcgaagg atgtttttca
     4801 gtatccggct aaaagggatg aggccataag acataacaat tacagaagga gtaactttca
     4861 tttgttccat gttaaccact ttttcagggg tcttttttta gattatcctg attataaacg
     4921 aataatccat ttacggaatt tttgtctgca aaatactact gtattcagga gtaaatggac
     4981 ggcgatgtat catcgccgtc catttttcga catactagat tcgtctcgcc tgccagaaat
     5041 ttttctgcca atagacatta tcaagtgagg aacgcatcac tcccttgctg gtagaggcgt
     5101 ggataaattg gttgttggta tcgtaaatac ctacatgcaa accattttgt ccggaccccg
     5161 ttttgaaaaa gaccaggtca cctggcagca acttgtcttt atcaatttgc gtgccaatag
     5221 aggcttgttg tttggtttca cggggcagct gcaaatcgaa acgatcgcgc atcgtcacaa
     5281 ccacaaatcc cgaacagtcc acaccgcgcc gcgtcatgcc accataacga tacggcgtgc
     5341 catgccagct ttgtagctgg tcgttcaaac cggcaataac ggtaatcgaa tcagaaagtc
     5401 tggcatttgg cggcggtgct ttatggtggc tacacccggc cagaaacagt gctgtgatca
     5461 aaataaggca gaaacgcatt ccgtacggtt cctctgtttt ttattcttgc attaatttag
     5521 cgtcgtaatt acccgatttt caagatacta atgaaatcag atggtcaaaa tcagcattct
     5581 gtgaccttcg atatccagac ggcgaaaatt catcccatag gcctgcgcca gatttggcgg
     5641 cgtgagcacc tcttctctgc gtccactggc cagcattttt ccacctttta gcaaccacgc
     5701 ccgatgcgca tgacgcaacg tgtggttgag atcgtgactg ctcatcacaa tcgccagtcc
     5761 ttgctgacac agcgcgctca gaattttgtc taacgcactt tgttgcgcaa catcaagact
     5821 gttcatcggc tcatcaagaa gcagcaattg gcctgcggga ttggcttgtg gtgtgatttg
     5881 caacaccacc gcagcaagac ctacgcgttg ccattcaccg ccggaaagtt gattggtgct
     5941 acgaccgagt ttgtcatcaa gagccagcgc ccctgcgaca tcattcagta gttcggtacg
     6001 cgttttatcg tgctgatgca gtgtcaggta gtgccagacc ggcattgcaa acggcggcgt
     6061 ctgctgttgt gaaagatagg cgcgatgcag cgcgagtttt gttgcggacc atgcttccag
     6121 gggttgcccc gcgaactgaa tgcttccctt accgctggtc attccggcca ttcgtgcaag
     6181 caaggtactc ttacccgcgc cattcggccc caccaggtgc aggatctccc cagcccgaac
     6241 ctcgccagaa agtggcccta ggcgggtaga ttccgcaaca tcctgtaact gcatcacaat
     6301 agacattatt ttgccaacgc cagtttaatg ctttccatca caatggggtc ttccggcgtc
     6361 atatccgggg aaaaacgctg gatgaccaat ccgtccctgc caactaaaaa tttctcaaaa
     6421 ttccataaaa tatcatcagg gtacagcggt gcacgacctt tgctgaccat acgggcatag
     6481 aatccgctct cttccggcgc gactgcggtc ggcgctgcgg caatcaattt ttgatacagc
     6541 ggatggcgtc cttcgccgtt aacttcaatc ttactgaaca tcgggaacgt caccccccat
     6601 gtggtggtac agtaagtttt aatctcttca tcgctgcccg gttcttgttc cagaaactgg
     6661 ttgcacggga atcccagcac cacaaaacct cgatcggccc aggctttctg aatattctcc
     6721 aactgctcat attgcggcgt taagccacac tttgaggcga cattgacaat caacagcaca
     6781 ttaccggcgt acttctccag cgtggtcact tcaccgtcga tatctttcac tacggtcgtc
     6841 agaatggaat cttgcatcgt ttctcctggg tgtggtcagt aaaaatctta gcttttaatc
     6901 atagaccgtc tttttgcggc taacgtcttg cttttaacaa taaccagata aacaccggcg
     6961 cacccaacgt tgcggtgacc acgccaataa gcagctctgc ggcagctaat gccaggcgcg
     7021 ctacaatatc ggccagcagc aatgcgctcg cccctgccag cgcgcagccg ggaagtaata
     7081 cgcgatgatc ggttaaacca cacaaccgaa gaatatgtgg gatcaccaga ccaataaagc
     7141 cgatagcacc cgccagcgcc acactgacgc caaccatcca gccggtcgcg gccaccagca
     7201 cattgcgcca gaaccacagg ggtaaaccca gttgccgcgc cgagatctcg ccaagtgcta
     7261 acatattcat cggcctggac tgacaacaga tccacaacaa cacggggatc aatgccagca
     7321 tcagccagct ttgccgccag tctacgccgc caaaaccgcc catcatccag tacatcagct
     7381 gacgtaaatc aacagaggtg gaaaagtaga tagcccacgt cattagtgcg ctacagataa
     7441 tccctaatgc aacgccagcc agcaataacc gactggtcga aagatgacga cgggcgaaac
     7501 gtaagagtat taaagtaatg ataagcgcgc cagcaatcgc acacagccct agcgcccagt
     7561 tggggagttg cccttgccca agcaataccg cggcgataag ccccacgcct gcgccgttag
     7621 agacgccaag tagtccaggt tctgccagag gattttcaaa caacgcctgc attacagcgc
     7681 cggatatagc cagcgccgca ccaaccaaca atacagccag cgtacgtggc aggcgaattt
     7741 gccagacgaa cagttcgcca cgaggagtaa accagtcacc tagcgagatc cattgttcac
     7801 cggcgcaaag gcttaaaaga agcgccagca gcatcaaaac tgacaggcat aataaccagc
     7861 gaatattttg tcgctgttgt tggcgggcaa gtgtcagcat ggtatccgtt ctgctgaagt
     7921 gtcatggcgt tgattttacg gtgactcttc gacagtgaaa agaaaaaagg ccgcagagcg
     7981 gccataaaca caagtaaaaa tcaacaagtt agataattat caaagactta cagacacaca
     8041 aaaacacagc caaccacaac aaataacagg gatgtggtca ctttgtggat catatcgccg
     8101 ccataaattt acttaataac agtaaccaca gccacaagca cggccatcgc agacaggaca
     8161 atacctgtga gtaaccaagt ctgatttgca aatgatttct gaagttcagt acgatgctca
     8221 gccatctcaa ctttcagaga ctggcgtaaa tcagccatct cagacttcag ggattggcgc
     8281 gattctgcca tctcaagcct caacccttcg cgaatctcca gtacatcaga tttggtagca
     8341 aaggattcgc ttcttgtggt gagagtaatc aggttgtttt tgatttcagt cacatcactt
     8401 tccaggcaac tgacccgccg ttcaaggtcg tcattcatgc catcacctcc atcattacca
     8461 cttcctgtta cttggttgtt ggatacatta taggcattct ctttcttttt tctgaaccgc
     8521 gaaatatgtg caacattctc tgccatcact tctcatcacc ctgcttgcct acccagttca
     8581 taaaggcccg ggccgagtaa cgatgaacaa acccacatct gttacaggta agtcggaatt
     8641 catagttatg gatattttcc cgatcatgtc cctcatatcc cggataccca gtaaatggac
     8701 cgatgtaatc aagcataaca aaagtgccta aatcacactc ctcagcagtt ttcggctcag
     8761 gccccacctc aacaatattc gtcaaataca tgtacatatc cgtatcgcca cacgacaaac
     8821 atttttcatt cgtagacgac tcattgagaa aacgcgcaaa attatcgagc gttgccattc
     8881 ttttaagttc atctaaatga aacttcactc ttaagcacct cctagtggat taaacctcac
     8941 cgcatcctgc aggtaatccg gcgcaagatg ggcataaatc atcgttgtct gaatctttgc
     9001 gtgccccaga attttctgga gcgtcagaat attgccgccg ttcat
//
LOCUS       DADMJE010000162         8849 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.165, whole genome shotgun sequence.
ACCESSION   DADMJE010000162 DADMJE010000000
VERSION     DADMJE010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8849)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8849)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8849
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.165"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1005
                     /locus_tag="JN001_003454"
     CDS             <1..1005
                     /locus_tag="JN001_003454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418144.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3748 domain-containing protein"
                     /protein_id="HAY9054568.1"
                     /translation="PKSEKYVFIHGPENPDETWYYDFHHRRGVIAEGGKVSNLDAMDI
                     TAPYTPGALRGGSHVHVFSPNGERVSFTYNDHVMHELDPALDLRNVGVAAPFGPVNVQ
                     KQHPREYSGSHWCVLVSKTTPTPQPGSDEINRAYEEGWVGNHALAFIGDTLSPKGEKV
                     PELFIVELPQDEAGWKAAGDAPLSGTETTLPAPPRGVVQRRLTFTHHRAYPGLVNVPR
                     HWVRCNPQGTQIAFLMRDDNGIVQLWLISPQGGEPRQLTHNKTDIQSAFNWHPSGEWL
                     GFVLDNRIACAHAQSGEVEYLTESHANPPSADAVVFSPDGQWLAWMEGGQLWITETDR
                     "
     gene            complement(1007..1339)
                     /locus_tag="JN001_003455"
     CDS             complement(1007..1339)
                     /locus_tag="JN001_003455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418143.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY9054569.1"
                     /translation="MIRNVLLAFMICSGMTLLGGCSSVMSHTGGKEGTYPGTRASATM
                     IGDDETNWGTKSLAILDMPFTAVMDTLLLPWDVFRKDSSVRSHVEKSEANAQATNAVI
                     PPARMPDN"
     gene            1645..2058
                     /gene="ibpA"
                     /locus_tag="JN001_003456"
     CDS             1645..2058
                     /gene="ibpA"
                     /locus_tag="JN001_003456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006687722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpA"
                     /protein_id="HAY9054570.1"
                     /translation="MRNFDLSPLYRSAIGFDRLFNHLENNQSQSNGGYPPYNVELVDE
                     NHYRIAIAVAGFAESELEITAQDNLLVVKGAHADEQKERTYLYQGIAERNFERKFQLA
                     ENIHVRGANLVNGLLYIDLERVIPEAKKPRRIEIN"
     gene            2170..2598
                     /gene="ibpB"
                     /locus_tag="JN001_003457"
     CDS             2170..2598
                     /gene="ibpB"
                     /locus_tag="JN001_003457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709512.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock chaperone IbpB"
                     /protein_id="HAY9054571.1"
                     /translation="MRNFDLSPLMRQWIGFDKLANALQNAGESQSFPPYNIEKSDDNH
                     YRITLALAGFRQEDLEIQLEGTRLSVKGTPEQPKEEKKWLHQGLMNQPFSLSFTLAEN
                     MEVSGATFVNGLLHIDLIRNEPEPIAAQRIAISERPALNS"
     gene            2794..4455
                     /locus_tag="JN001_003458"
     CDS             2794..4455
                     /locus_tag="JN001_003458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312652.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative transporter"
                     /protein_id="HAY9054572.1"
                     /translation="MSDIALTVSILALVAVVGLFIGNVKFRGIGLGIGGVLFGGIIVG
                     HFVSQAGMTLSSDMLHVIQEFGLILFVYTIGIQVGPGFFASLRVSGLRLNLFAVLIVI
                     IGGLVTAILHKLFDIPLPVVLGIFSGAVTNTPALGAGQQILRDLGTPMEMVDQMGMSY
                     AMAYPFGICGILFTMWMLRVIFRVNVETEAQQHESSRTNGGALIKTINIRVENPNLHD
                     LAIKDVPILNGDKIICSRLKREETLKVPSPDTIIQLGDLLHLVGQPADLHNAQLVIGQ
                     EVDTSLSTKGTDLRVERVVVTNENVLGKRIRDLHFKERYDVVISRLNRAGVELVASGD
                     ISLQFGDILNLVGRPSAIDAVANVLGNAQQKLQQVQMLPVFIGIGLGVLLGSIPVFVP
                     GFPAALKLGLAGGPLIMALILGRIGSIGKLYWFMPPSANLALRELGIVLFLSVVGLKS
                     GGDFVNTLVNGEGLSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPP
                     ALAFANNLHPTSGAPALSYATVYPLVMFLRIITPQLLAVLFWSIG"
     gene            complement(4452..5168)
                     /locus_tag="JN001_003459"
     CDS             complement(4452..5168)
                     /locus_tag="JN001_003459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY9054573.1"
                     /translation="MIYKSIAERLRIRLNSADFTLNSLLPGEKKLAEEFAVSRMTIRK
                     AIDLLVAWGLVVRRHGSGTYLVRKDVLHQTASLTGLVEVLKRQGKTVTSQVLIFEIMP
                     APPAIASQLRIQINEQIYFSRRVRFVEGKPLMLEDSYMPVKLFRNLSLQHLEGSKFEY
                     IEQECGILIGGNYESLTPVLADRLLARQMKVAEHTPLLRITSLSYSESGEFLNYSVMF
                     RNASEYQVEYHLRRLHPEKS"
     gene            5463..7079
                     /locus_tag="JN001_003460"
     CDS             5463..7079
                     /locus_tag="JN001_003460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312650.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HAY9054574.1"
                     /translation="MLSQIQRFGGAMFTPVLLFPFAGIVVGLAILLQNPMFVGESLTD
                     PNSLFAQIVHIIEEGGWTVFRNMPLIFAVGLPIGLAKQAQGRACLAVMVSFLTWNYFI
                     NAMGMIWGSYFGVDFTQDAVAGSGLTMMAGIKTLDTSIIGAIIISGIVTALHNRLFDK
                     KLPVFLGIFQGTSYVVIIAFLVMIPCAWLTLLGWPKVQMGIESLQAFLRSAGALGGWV
                     YTFLERILIPTGLHHFIYGQFIFGPAAVEGGIQMYWAQHLQEFSLSAEPLKSLFPEGG
                     FALHGNSKIFGAVGISLAMYFTAAPENRVKVAGLLIPATLTAMLVGITEPLEFTFLFI
                     SPLLFAVHALLAASMSTVMYLFGVVGNMGGGLIDQVLPQNWIPMFSNHADMMLTQIAI
                     GLCFTLLYFVVFRTLILQFNMCTPGREDAEVKLYSKAEYKASRGQTTAAEPKKELDQA
                     AGILQALGGVGNISSINNCATRLRIALHDMSQTLDDEVFKKLGAHGVFRSGDAIQVII
                     GLHVSQLREQLDSLINSHQSAENVAITEAV"
     gene            7079..8402
                     /locus_tag="JN001_003461"
                     /pseudo
     CDS             7079..8402
                     /locus_tag="JN001_003461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312649.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-alpha-glucosidase"
     gene            complement(8399..8473)
                     /locus_tag="JN001_003462"
                     /pseudo
     CDS             complement(8399..8473)
                     /locus_tag="JN001_003462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709516.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
     gene            complement(8533..8849)
                     /gene="tnpA"
                     /locus_tag="JN001_003463"
                     /pseudo
     CDS             complement(8533..8849)
                     /gene="tnpA"
                     /locus_tag="JN001_003463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313209.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
BASE COUNT         2040 a         2217 c         2336 g         2256 t
ORIGIN      
        1 ccgaagtcag agaaatatgt tttcatccat ggcccggaaa atcctgatga aacatggtat
       61 tacgatttcc atcatcgacg cggagtcatt gctgaaggcg gcaaggtgag caatctcgat
      121 gcaatggata ttaccgcgcc gtatacgcca ggagcgctgc gcggcggcag ccatgtgcat
      181 gtctttagcc cgaacggtga aagggtgagc tttacctata acgaccatgt aatgcatgaa
      241 ctcgatccgg cgctggattt gcgaaacgtc ggtgttgctg cgccgtttgg cccggtcaac
      301 gtacaaaagc agcatccgcg tgaatacagc ggtagccact ggtgcgtgct ggtgagtaaa
      361 accacgccca cgccgcagcc tggcagcgat gaaatcaatc gtgcttatga agaaggatgg
      421 gtaggaaatc acgcgctggc gtttattggc gacacacttt cgccaaaggg cgagaaagtg
      481 ccggagctgt ttatcgttga gttaccgcaa gatgaagctg gctggaaagc ggcaggtgat
      541 gcgccgttaa gtggaacgga aaccaccctg cccgcgccac cgcgcggcgt cgtgcagcga
      601 cgtttaacct ttacccacca tcgggcttat ccggggttag tcaacgtccc gcgccactgg
      661 gtgcgctgta atccgcaggg tacgcaaatc gcgtttttaa tgcgtgatga taacggcatt
      721 gtgcaactgt ggcttatctc gccacagggc ggcgagccgc gccagttaac ccataacaaa
      781 acggatattc agtctgcatt taactggcat ccgtcaggag aatggttggg ctttgtgctg
      841 gataatcgaa ttgcttgtgc ccatgcgcaa agtggcgagg ttgagtattt aaccgaaagc
      901 cacgccaatc caccttctgc ggacgccgtg gtcttctcgc cggatggtca atggctggcg
      961 tggatggaag gcggccagct gtggatcacc gaaactgatc gctaaatcag ttatcaggca
     1021 ttctggccgg tggaataacc gcattggtgg cttgcgcgtt ggcttcgctt ttttcaacgt
     1081 gtgagcgcac cgagctgtct ttgcggaaca catcccacgg cagtaaaagc gtgtccatca
     1141 cagcggtaaa cggcatatcg agaatcgcca gcgacttagt gccccagttg gtttcatcgt
     1201 cgccaatcat ggttgcgctg gcgcgggtgc cgggatacgt tccttctttc cctccggtat
     1261 gggacatcac gctggagcat cctccgagta atgtcattcc gctgcatatc atgaacgcta
     1321 acaacacatt tcttatcata ataaattcat ctgttgatcg tgggtgttgg cctgatgagt
     1381 tatagcgatc ccttgctgaa aataacatca tcattacgtc gcactgtggc ggctatcgca
     1441 ctttaacgtt tcgtgctgcc ccctcagtct atgcaataga ccataaactg caaaaaaaag
     1501 tccgctgata aggcttgaaa agttcatttc cagacccatt tttacatcgt agccgatgag
     1561 gacgcgcctg atgggtgttc tggctacctg acctgtccat tgtggaaggt attacattct
     1621 cgctgatttc aggagctatt gattatgcgt aactttgatt tatccccgct ttaccgttct
     1681 gctattggat ttgaccgttt gtttaaccac ttagaaaaca accagagcca gagtaatggc
     1741 ggctaccctc cgtataacgt tgaactggta gacgaaaacc attaccgcat tgctatcgct
     1801 gtggctggtt ttgctgagag cgaactggaa attaccgccc aggataatct gctggtggtg
     1861 aaaggtgctc acgccgacga acaaaaagag cgcacctatc tgtaccaggg catcgctgaa
     1921 cgcaactttg aacgcaaatt ccagttagct gagaacattc atgttcgtgg ggctaacctg
     1981 gtaaatggtt tgctgtatat cgatctcgaa cgcgtgattc cggaagcgaa aaaaccgcgc
     2041 cgtatcgaaa tcaactaatt ccctaaggcc gcctgacgcg gcctgacatc tccatgctcg
     2101 ccgtcaggga gcatatgcga atcttcggat ttgcaggtac ttactcgctt cttagaagga
     2161 gaaatgacta tgcgtaactt cgatttatcc ccactgatgc gtcaatggat cggttttgac
     2221 aaactggcca acgcactgca aaacgccggt gaaagccaga gcttcccgcc gtacaacatt
     2281 gagaaaagcg acgataacca ctaccgcatt acccttgcgc tggcaggttt ccgtcaggaa
     2341 gatttagaga ttcaactgga aggtacgcgc ctgagcgtaa aaggcacgcc ggagcagcca
     2401 aaagaagaga aaaaatggct gcatcaaggg cttatgaatc agccatttag cctgagcttt
     2461 acgctggctg aaaatatgga agtctctggc gcaaccttcg taaacggttt actgcatatt
     2521 gatttaattc gtaatgagcc tgaacccatc gcagcgcagc gtatcgctat cagcgaacgt
     2581 cccgcgttaa atagctaact agctattctc tttgccccgc cattctggtg gggctttttt
     2641 tgtctttctt cttcaacaat gcgttaaatt tcgactgttt aagatatttc ggcacgttct
     2701 ttcccgtgat aatgtgcgct ataaggcaaa tctgcttcac cgattcagcc ataatccgta
     2761 gcaattaaaa tgttatctca agagaaatgg acgatgagtg atatagcatt aacggtcagt
     2821 attctggctt tggtggcagt cgtcggtttg tttatcggca acgtcaaatt tcgcggcata
     2881 ggattaggta ttggcggcgt gctgtttggt gggatcatcg tcggccattt tgtttctcag
     2941 gcggggatga cattaagtag cgatatgctg catgttattc aggaatttgg cctgatcctg
     3001 ttcgtttata ccatcgggat tcaagtaggg ccgggcttct ttgcctcatt gcgcgtctcc
     3061 ggcttacgcc tcaacctgtt tgctgttctg atcgtcatca tcggtggtct ggttaccgcc
     3121 atcctgcata aactgtttga tattccactg ccggtagtgc tggggatttt ctccggtgcg
     3181 gttaccaata cgccagcgct gggggcaggg cagcagatct tgcgcgacct gggtacacca
     3241 atggaaatgg tcgatcagat ggggatgagt tacgcgatgg cgtatccatt cggcatttgc
     3301 gggattttgt tcaccatgtg gatgttgcgg gttattttcc gcgtcaatgt cgagacagaa
     3361 gctcagcagc acgagtcttc acgcaccaat ggcggcgcgc tgatcaagac tatcaatatt
     3421 cgcgttgaga accctaacct gcatgattta gctattaaag atgtaccgat tctcaacggc
     3481 gacaaaatta tctgctcgcg tctgaaacgc gaagaaaccc taaaagttcc ttcgccagat
     3541 accattatcc aactgggcga tttgctgcat ctggtggggc agccagcgga tttacataat
     3601 gcgcaactgg tgattggtca ggaggtcgat acttcgctgt ccacgaaagg cactgatttg
     3661 cgcgtcgagc gtgtggtggt caccaatgaa aacgtgctcg gaaaacgtat tcgcgacctg
     3721 cactttaaag aacgctatga cgttgttatc tcgcgcctga accgtgccgg ggtcgaactg
     3781 gtcgccagtg gcgatatcag cctgcagttc ggcgatatcc tcaatctggt ggggcgtccg
     3841 tccgcaattg atgccgttgc caatgtgctg gggaatgcgc agcaaaaact gcaacaggtt
     3901 cagatgctgc cagtgtttat tggcatcggg cttggcgtat tgttaggttc tattcccgtc
     3961 tttgtgcctg ggttcccggc cgcgttgaaa ctggggctgg cgggcggtcc gctgattatg
     4021 gcgttgatcc tcgggcgtat cggcagtatc ggcaagctgt actggtttat gccgccaagt
     4081 gccaacctcg cgctgcggga gctggggatc gtgctgttcc tctcggtcgt tggtctgaaa
     4141 tctggtgggg attttgtgaa taccctggtc aatggcgaag ggctaagctg gattggttat
     4201 ggtgccctga tcaccgccgt tccgctgatt actgttggca ttctggcgcg gatgttagcc
     4261 aaaatgaatt acctgaccat gtgcgggatg ctggcaggtt ccatgaccga tcctccggcg
     4321 ctggcgtttg ctaataatct tcatccaacc agtggtgcgc cggcgctctc ttacgccact
     4381 gtctatccgt tagtgatgtt tctgcgaatt atcacccccc aattactggc ggtgctcttc
     4441 tggagtatcg gttaactctt ttccgggtgg agtcgccgta aatggtactc cacctggtat
     4501 tcgctggcat ttctgaacat cactgaataa ttcaaaaact ccccgctctc gctatatgac
     4561 aacgaggtga tccgcagcag tggcgtgtgt tccgctacct tcatttgccg cgccagcagt
     4621 ctatcggcga gcaccggcgt caggctttca taattaccgc caatcaaaat cccacactct
     4681 tgttcaatat attcaaactt cgacccttcc agatgttgca gcgaaagatt acggaacagt
     4741 ttaaccggca tatagctgtc ttccagcatc agcggtttcc cttccacaaa acgaacgcga
     4801 cgggagaagt agatctgctc gttgatttga atccgtaact ggctggcaat ggccggaggc
     4861 gcaggcatga tttcaaaaat cagcacctgg ctggtgaccg tttttccctg ccgttttaac
     4921 acctccacca gtccggtcag gctggcggtt tgatgcagca catctttgcg caccaggtaa
     4981 gtgccgctgc cgtggcggcg gaccaccagc ccccacgcta ccagcaggtc aatcgcttta
     5041 cggatggtca tccgggatac tgcaaattct tccgccaact ttttttcacc gggaagaagg
     5101 ctgtttagcg tgaaatccgc ggaattaagt cgaattctta accgctccgc aatgcttttg
     5161 tagatcatct ctagatctct tttttgcctg caagcccggg taatgcgccc acaagttctg
     5221 cttaatcgat tgaaaaaaca tcttttttta aagatgtgtt cgatgctgtg taccagtgct
     5281 cacagatgtc tactttttcg cgaaaacgta gatctctacc gcccaacgaa aagcatgaaa
     5341 gcgatcacga atcccattgg gtcgtcatgt tctgccgatc gcatcttcct atcctcgctc
     5401 caggcctgcc gcataaccaa tcaggcttcc tacttacaga attgagaaaa gaggatgtgg
     5461 aaatgctcag tcaaattcaa cgctttggcg gcgcgatgtt cacgccagtg ctgctgtttc
     5521 ccttcgccgg gattgtggtg ggtcttgcca tcttgctgca aaacccgatg tttgtcgggg
     5581 aatcactgac cgatccgaac agtttattcg cgcaaatcgt acacattatt gaagagggcg
     5641 gttggacggt attccgtaat atgccgctga tttttgctgt cggtttaccc attggccttg
     5701 ctaagcaagc gcaggggcgt gcttgtctgg cggtgatggt gagtttcctg acctggaact
     5761 atttcatcaa cgcgatggga atgatctggg gaagctactt cggcgtcgat ttcactcagg
     5821 acgcggtggc aggtagcggt ctgacaatga tggccgggat taaaaccctc gataccagca
     5881 ttatcggcgc aattatcatt tccggcattg tgacggcgct gcataaccgt ctgttcgata
     5941 aaaaactgcc ggtttttctc ggcattttcc aggggacgtc ttatgtggtg attatcgcct
     6001 tcctggtgat gatcccctgt gcctggctga cgttgctcgg ttggccaaaa gtacaaatgg
     6061 ggattgaatc tctgcaagcg ttcctgcgtt cggcgggtgc gcttgggggg tgggtttaca
     6121 ccttcctcga acgtattctg atcccaaccg gtttacacca cttcatctac ggacagttta
     6181 tctttggtcc ggcagctgtt gaaggcggca ttcagatgta ctgggcgcag catctgcaag
     6241 agttcagtct gagcgccgag ccgctgaaat cgttgttccc ggaaggcggt tttgccctgc
     6301 acggtaactc aaaaatcttt ggtgccgtgg gcatttcttt agcgatgtac ttcactgccg
     6361 caccggaaaa tcgggtaaaa gtggcgggct tgctgattcc cgcaacctta accgccatgc
     6421 tggtgggaat taccgaaccg ctggaattta ccttcctgtt catttcaccg ttgctgtttg
     6481 cggtacacgc cttgctggcg gcctcaatgt cgaccgtgat gtatctcttt ggtgtggtgg
     6541 gcaacatggg cggaggtctg attgaccagg ttttaccgca aaactggatc ccgatgttca
     6601 gcaaccacgc ggatatgatg ctgacccaaa tcgccattgg gttgtgcttt accctgctgt
     6661 acttcgtggt tttccgcaca ctgattctgc aattcaacat gtgcacgccg ggacgtgaag
     6721 atgcggaagt gaaactctac tcaaaagccg aatacaaagc ctcgcgaggc caaaccaccg
     6781 ctgcagagcc aaaaaaagag ctggatcagg ctgccggtat cctgcaagcc ctgggcgggg
     6841 tcggcaatat ctccagcatt aacaattgcg cgacgcgttt acgtattgca ctgcatgaca
     6901 tgtcacaaac gctggatgac gaagtcttta aaaagctggg agcgcacggc gtcttccgta
     6961 gtggcgatgc cattcaggtg atcattggtc tgcatgtatc ccagctgcgt gaacagctcg
     7021 atagcttaat taattctcat caatcagcag aaaatgttgc cattacggag gcagtataat
     7081 gaccaaattc tcagtggttg tcgcaggcgg tggaagcacc tttacgccag gcatcgtgtt
     7141 gatgctcctg gcgaatcagg accgtttccc gcttcgtgca ctgaaatttt atgataacga
     7201 tggtgcgcgg caggaagtga ttgccgaagc ctgtaaagtc atccttaaag agaaagcgcc
     7261 ggacattgcg tttagttaca ccaccgatcc tgaagtggca ttcagcgacg ttgattttgt
     7321 catggcgcac atccgcgtcg gcaaataccc gatgcgcgaa ctggatgaaa aaatcccgct
     7381 gcgccacggc gttgttggtc aggaaacttg cggacccggc ggaatagcgt acggcatgcg
     7441 ttccattggc ggcgtcctgg aactggtgga ttatatggaa aaatattcac caaatgcctg
     7501 gatgctcaac tactccaacc cggcagcaat tgtcgcagaa gccacgcgtc gtctgcgccc
     7561 gaatgcgaaa atcctcaaca tctgtgacat gccaatcggt attgaaagcc ggatggcgca
     7621 aattgttggg ctgcaagatc gcaaacagat gcgcgtgcgc tactacggcc tgaaccactt
     7681 tggctggtgg acatcaattg aagatttgca gggcaacgac ctgatgcccc agctgcggca
     7741 atatgtctct aagcacggtt atgttccacc gcagcaagat acacatactg aagcgagctg
     7801 gaacgacacc tatgcaaaag cgcgggatgt ccaggcactg gacccggata cattgccgaa
     7861 cacctatctg aaatattatc tcttcccgga ttatgttgtt cagcattcca accctgaaca
     7921 tacccgcgcg aatgaggtga atggaacatc gcgagaaaca ggttttcgat gcttgccgcg
     7981 ccattacagc ggcaggaaat tcagcggcgg ccaagctgga gattgacgaa catgcgtcat
     8041 acatcgtcga tctggcggcg gcaattgcct tcaacactca ggagcggatg ttgctgattg
     8101 tgcctaacaa cggggcaatc cataactttg atgatgaagc gatggtcgag atcccgtgtc
     8161 tggtcgggca caacggacca gaaccactgg tggtcggcga tatcccgcag tttcagaaag
     8221 ggttaatgag tcagcaagtg gcggtggaaa aactggtcgt ggacgcctgg gaacagcgtt
     8281 catatcagca cctgtggcag gcgattacgt tatcgaaaac ggtaccgagc gcctcggtcg
     8341 ccaaagctat tctggatgag ttgctggagg ccaacaaagc gtactggcca gagttacgtt
     8401 aattgtgtgg actggcatcc gttgggtgct ggtccgtatt ctttagcacg gctgacggcg
     8461 cataaccaaa tttatccggt gcgccgtaaa accccgtcct tcagggcggg gatataaggc
     8521 gcggttttcc acctaaccag gtgtttgctg ttgttcaatg tattggcgga tgacggatat
     8581 tggcgcacct ccgcagctat tggcaaaata gccaggactc cacaaaacgc ctttgtagta
     8641 atacctgact gcaatatctg gtcgatctcg tcgcagtaac ctacccgata cgcctttgag
     8701 gctgtttacc agactggata tcgccagttt gggaggatag ttaattaaca aatggacgtg
     8761 atctggttcg ccatccattt aaaccagttc agcttcaaaa tcagcacata catttgaaaa
     8821 gtaagtgcgt agtttttctg tcgcgtcat
//
LOCUS       DADMJE010000163         8734 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.166, whole genome shotgun sequence.
ACCESSION   DADMJE010000163 DADMJE010000000
VERSION     DADMJE010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8734
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.166"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            244..1155
                     /gene="ttdA"
                     /locus_tag="JN001_003464"
     CDS             244..1155
                     /gene="ttdA"
                     /locus_tag="JN001_003464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit alpha"
                     /protein_id="HAY9054575.1"
                     /translation="MMSESNKQQAVNKLTEIVANFTAMISTRMPDDVVDKLKQLKDAE
                     TSSMGKIIYHTMFDNMQKAIDLNRPACQDTGEIMFFVKVGSRFPLLGELQSILKQAVE
                     EATVKAPLRHNAVEIFDEVNTGKNTGSGVPWVTWDIIPDNDDAEIEVYMAGGGCTLPG
                     RSKVLMPSEGYEGVVKFVFENISTLAVNACPPVLVGVGIATSVETAAVLSRKAILRPI
                     GSRHPNPKAAELELRLEEGLNRLGIGPQGLTGNSSVMGVHIESAARHPSTIGVAVSTG
                     CWAHRRGTLLVHADLTFENLSHTRSAL"
     gene            1152..1757
                     /gene="ttdB"
                     /locus_tag="JN001_003465"
     CDS             1152..1757
                     /gene="ttdB"
                     /locus_tag="JN001_003465"
                     /EC_number="4.2.1.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L(+)-tartrate dehydratase subunit beta"
                     /protein_id="HAY9054576.1"
                     /translation="MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELK
                     RPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGK
                     GGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRGKEF
                     GPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK"
     gene            1806..3269
                     /locus_tag="JN001_003466"
     CDS             1806..3269
                     /locus_tag="JN001_003466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-tartrate/succinate antiporter"
                     /protein_id="HAY9054577.1"
                     /translation="MKPSTEWWRYLAPLAVIAIIALIPVPAGLESHTWLYFAVFTGVI
                     VGLILEPVPGAVVAMVGISIIAILSPWLLFSPEQLAQPGFKFTAKSLSWAVFGFSNSV
                     IWLIFAAFMFGTGYEKTGLGRRIALILVKKMGHRTLFLGYAVMFSELILAPVTPSNSA
                     RGAGIIYPIIRNLPPLYQSQPNDSSSRSIGSYIMWMGIVADCVTSAIFLTAMAPNLLL
                     IGLMKSASHATLSWGDWFLGMLPLSILLVLLVPWLAYVLYPPVLKSGDQVPRWAETEL
                     QAMGPLCSREKRMLGLMVGALVLWIFGGDYIDAAMVGYSVVALMLLLRIISWDDIVSN
                     KAAWNVFFWLASLITLATGLNNTGFISWFGKLLAGSLSGYSPTMVMVALIVVFYLLRY
                     FFASATAYTSALAPMMIAAALAMPEIPLPVFCLMVGAAIGLGSILTPYATGPSPIYYG
                     SGYLPTADYWRLGAIFGLIFLVLLVITGLLWMPVVLL"
     gene            complement(3312..4325)
                     /gene="tsaD"
                     /locus_tag="JN001_003467"
     CDS             complement(3312..4325)
                     /gene="tsaD"
                     /locus_tag="JN001_003467"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001264383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HAY9054578.1"
                     /translation="MRVLGIETSCDETGIAIYDDEKGLLANQLYSQVKLHADYGGVVP
                     ELASRDHVRKTVPLIQAALKESGLTAKDIDAVAYTAGPGLVGALLVGATVGRSLAFAW
                     NVPAIPVHHMEGHLLAPMLEDNPPEFPFVALLVSGGHTQLISVTGIGQYELLGESIDD
                     AAGEAFDKTAKLLGLDYPGGPLLSKMAAQGTAGRFVFPRPMTDRPGLDFSFSGLKTFA
                     ANTIRDNGTDDQTRADIARAFEDAVVDTLMIKCKRALDQTGFKRLVMAGGVSANRTLR
                     AKLAEMMKKRRGEVFYARPEFCTDNGAMIAYAGMVRFKAGATADLGVSVRPRWPLAEL
                     PAA"
     gene            4562..4777
                     /gene="rpsU"
                     /locus_tag="JN001_003468"
     CDS             4562..4777
                     /gene="rpsU"
                     /locus_tag="JN001_003468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HAY9054579.1"
                     /translation="MPVIKVRENEPFDVALRRFKRSCEKAGVLAEVRRREFYEKPTTE
                     RKRAKASAVKRHAKKLARENARRTRLY"
     gene            4888..6633
                     /gene="dnaG"
                     /locus_tag="JN001_003469"
     CDS             4888..6633
                     /gene="dnaG"
                     /locus_tag="JN001_003469"
                     /EC_number="2.7.7.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY9054580.1"
                     /translation="MAGRIPRVFINDLLARTDIVDLIDARVKLKKQGKNFHACCPFHN
                     EKTPSFTVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEVPFEAG
                     SGPSQIERHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGF
                     APPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQGRSYDRFRERVMFPIRDKRGRVIGF
                     GGRVLGNDTPKYLNSPETDIFHKGRQLYGLYEAQQDNAEPNRLLVVEGYMDVVALAQY
                     GINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQ
                     LRFMFLPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLS
                     TLALPLISQVPGETLRIYLRQELGNKLGILDDSQLERLMPKAAESGVSRPVPQLKRTT
                     MRILIGLLVQNPELATLVPPLENLDENKLPGLGLFRELVNTCLSQPGLTTGQLLEHYR
                     GTNNAATLEKLSMWDDIADKNIAEQTFTDSLNHMFDSLLELRQEELIARERTHGLSNE
                     ERLELWTLNQELAKK"
     gene            6828..8669
                     /gene="rpoD"
                     /locus_tag="JN001_003470"
     CDS             6828..8669
                     /gene="rpoD"
                     /locus_tag="JN001_003470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HAY9054581.1"
                     /translation="MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDI
                     IQMINDMGIQVMEEAPDADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYM
                     REMGTVELLTREGEIDIAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSD
                     LITGFVDPNAEEDLAPTATHVGSELSQEDLDDDEDEDEEDGDDDSADDDNSIDPELAR
                     EKFAELRAQYVVTRDTIKAKGRSHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRVM
                     MDRVRTQERLIMKLCVEQCKMPKKNFITLFTGNETSDTWFNAAIAMNKPWSEKLHDVS
                     EEVHRALQKLQQIEEETGLTIEQVKDINRRMSIGEAKARRAKKEMVEANLRLVISIAK
                     KYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTI
                     RIPVHMIETINKLNRISRQMLQEMGREPTPEELAERMLMPEDKIRKVLKIAKEPISME
                     TPIGDDEDSHLGDFIEDTTLELPLDSATTESLRAATHDVLAGLTAREAKVLRMRFGID
                     MNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD"
BASE COUNT         2109 a         2330 c         2334 g         1961 t
ORIGIN      
        1 cctgcaagtc tttggctaaa ggccagctat tcagcatcgt taattatccg cagttgtgat
       61 aagcgcagtg tatttcgcaa aacattgcca ttccctgctc tggcgcaata ttcattctta
      121 ttttcgcgtt gattcacgaa ctgttaatta catattcacg gtggcaaaaa atataaaacc
      181 acatttttag tggtagttta tggcggtgaa tttttccaga caaatacaaa aactggagtt
      241 gccatgatga gcgaaagtaa taagcaacag gcagtgaata agttgacaga gattgtcgct
      301 aactttaccg ccatgatttc tacccgaatg cctgatgacg tggtggataa actaaaacag
      361 ctaaaggatg ccgaaacgtc gtcgatgggg aaaattatct accatacgat gttcgacaac
      421 atgcaaaaag cgattgacct gaatcgtcct gcctgtcagg acaccgggga gattatgttc
      481 ttcgttaaag tcggttcccg cttcccactg cttggcgagc tgcaaagcat actcaaacaa
      541 gccgtggaag aggcaaccgt caaagcgcca ctacgtcaca atgcggtaga aatttttgac
      601 gaagtaaaca ccggcaaaaa taccggtagc ggcgtaccgt gggtcacctg ggacatcatc
      661 cccgacaatg acgatgcgga aatcgaagtt tacatggcag gtggcggctg cacgctacct
      721 ggccgctcga aagtgttaat gccgtcagaa ggctacgaag gcgtggtgaa attcgtcttc
      781 gaaaatatct ccaccctcgc cgtaaacgcc tgtccaccgg tactggtggg cgtgggcatc
      841 gccacctcgg tggaaaccgc cgccgtactc tcgcgtaaag ccattttgcg cccgattggc
      901 agccgccatc ccaatccaaa agcggcagaa ctggagctac gcctggaaga aggactcaac
      961 cgtctgggga ttggtccaca agggctgact ggcaacagtt cagtgatggg cgtacatatc
     1021 gaatctgccg cccgccatcc gtcaaccatc ggcgttgctg tctctaccgg ctgctgggcg
     1081 catcgtcgcg gcacactgct ggttcatgcc gatctcacct ttgaaaatct gtctcacacc
     1141 cggagcgcgt tatgaaaaag atcctgacaa ccccgatcaa agctgaagat ctgcaagata
     1201 ttcgcgtcgg cgatgtgatc tacctgaccg gtacgctggt gacctgccgt gacgtttgtc
     1261 accgccgctt gatcgaactg aaacgtccga tcccttacga tctcaacggc aaagcgattt
     1321 tccacgctgg ccccatcgtg cgcaaaaacg gcgataaatg ggagatggtt tccgttggcc
     1381 cgacaaccag tatgcgtatg gaaagttttg aacgtgaatt tatcgagcag accggcgtga
     1441 aactggtggt tggcaaaggc ggaatggggc cgctgaccga agaaggctgc cagaaattca
     1501 aggcgctaca tgtgattttc ccggcaggct gcgcggtgct ggcggcaacc caggtggaag
     1561 agattgaaga agtgcactgg acagagctcg gaatgccgga gtcgctgtgg gtctgccggg
     1621 gcaaagagtt cggcccgctg attgtctcta ttgataccca cggcaacaat ctgatagccg
     1681 aaaacaaaaa gctgttcgcc gaacgccgcg atcccatcgt ggaagagatc tgcgagcacg
     1741 tccattacat caaataaccc tcccggagag gctcgccccc tctccttttt cgcaggcata
     1801 acacgatgaa accttccact gaatggtggc gataccttgc gccgctggcg gtcatcgcca
     1861 ttattgctct aattccggtt cccgcagggc tggagagtca tacctggctc tactttgccg
     1921 tttttactgg cgtgatcgtt ggactgatcc tcgaacccgt gccgggtgcc gtggtggcga
     1981 tggtgggtat ctccatcatc gccatactct ctccctggct gctgttcagc cccgaacagc
     2041 tcgcccagcc aggctttaag ttcaccgcca aatccctctc ctgggcagtt tttggttttt
     2101 ctaattcggt tatctggctc attttcgccg cctttatgtt tggcacaggc tatgaaaaaa
     2161 ccgggcttgg acgccgcatt gcgctgattc tggtgaaaaa gatgggacat cgcacgctgt
     2221 ttctcggcta tgcggtgatg ttctccgagc tgatcctcgc acctgtaaca ccgtccaact
     2281 cggcgcgtgg tgcggggatt atctatccca tcatccgtaa cctgccaccg ctctatcaat
     2341 cacaaccaaa cgacagcagt tcgcgcagca ttggctcgta catcatgtgg atggggattg
     2401 ttgccgactg cgtgaccagc gccattttct tgacggcgat ggcaccaaac ttgctgttaa
     2461 ttggactgat gaaaagcgca tctcacgcca cgctgagttg gggcgactgg ttcctcggga
     2521 tgttgccgct cagtattttg ctggtgctgc tggttccctg gctggcttat gtgctgtacc
     2581 cgccggtact gaagtctggc gatcaggtgc cgcgctgggc agagacggaa ctgcaggcaa
     2641 tgggcccgct ctgttcgcgt gaaaaacgga tgctggggct gatggtaggc gcgctggtgc
     2701 tgtggatttt cggcggtgat tatatcgatg ccgcgatggt cggttacagc gtggtggcac
     2761 tgatgctgct tctgcgcatt atcagttggg acgacattgt cagtaataaa gcggcgtgga
     2821 acgttttctt ctggctggcc tcgcttatca ccctcgctac cggactcaac aacactggtt
     2881 ttattagctg gtttggcaaa ctgttagcag gcagcttaag cggttattcg ccaacgatgg
     2941 tgatggtggc gttgattgtg gtgttttatc tgctgcgcta ctttttcgcc agcgccacgg
     3001 cgtatacctc cgccctcgca ccgatgatga ttgccgctgc gctggcgatg ccggaaatcc
     3061 cgctgccggt gttctgccta atggttggcg cggcaattgg tctggggagc attcttacac
     3121 catacgccac cggacccagt ccgatttact acggtagtgg ttatctgcca acggcggatt
     3181 actggcgact gggggcgatt tttgggctga tattcctcgt gttgctggtg attaccggct
     3241 tactgtggat gcccgtggtg ttgctttaag tgaggacggt gccggaaatt gctctccggc
     3301 acccaatagt tttacgcagc cggtaactcc gccagcggcc agcgcggacg cacgctaacg
     3361 ccgagatccg ccgtcgcgcc tgctttaaac cgcaccattc cggcataggc gatcatcgcg
     3421 ccgttatcag tacaaaactc cggacgcgcg tagaacactt cgccgcggcg ttttttcatc
     3481 atttccgcca gcttcgcccg taacgtgcgg ttagcactca cgccgcccgc catgaccagt
     3541 cgcttaaagc ccgtctgatc caacgctcgc ttacacttaa tcatcaacgt atcgaccacc
     3601 gcatcttcaa aggcgcgggc gatatcagca cgcgtctggt cgtcggtgcc gttgtcacga
     3661 atcgtgttcg ccgcaaaggt tttcagacca gaaaagctga aatccagccc cggacggtcg
     3721 gtcatcggac gcgggaaaac aaagcgcccg gcagtaccct gagccgccat tttcgacagt
     3781 aacggtccgc caggataatc cagccccagc agcttcgcgg ttttatcaaa cgcttcaccg
     3841 gcggcatcat cgatagactc gccgagcagc tcgtactgac caatgccagt cacgctgatt
     3901 aactgcgtat gaccgccgga caccagcagc gcgacaaacg gaaattccgg cgggttatct
     3961 tccagcatcg gcgctaacag atgcccttcc atatggtgta ccgggattgc cggaacgttc
     4021 caggcaaacg ccagagaacg ccccacggtt gcgccaacca gcagtgcgcc gactaatcca
     4081 gggcctgcgg tataggccac agcatcaatg tcttttgccg ttaagccaga ctcctttagc
     4141 gccgcctgga tcaacggtac ggttttgcgc acgtgatcgc gggaggccag ttcaggcacg
     4201 acgccgccgt agtcagcgtg caatttcacc tgactataca attggttggc taacaaacct
     4261 ttttcatcgt cgtaaatggc gatgccggtt tcatcgcagg aagtttcaat acccagtaca
     4321 cgcatgactt gttttacctc gctttattac cgcgcagtgt aggaccaatg cgggttgatg
     4381 taaaactttg ttcgcccctg gagaaagcct cgtgtatact cctcaccctt ataaaagtcc
     4441 ctttcaaaaa ggccgcggtg ctttacaaag cagcagcaat tgcagtaaaa ttccgcacca
     4501 ttttgaaata agctggcgtt gatgccagcg gcaaaccgaa ttaatcaaag gtgagaggca
     4561 catgccggta attaaagtac gtgaaaacga gccgttcgac gtagctctgc gtcgcttcaa
     4621 gcgttcctgc gaaaaagcag gtgttctggc ggaagttcgt cgtcgtgagt tctatgaaaa
     4681 accgactacc gaacgtaagc gcgctaaagc ttctgcagtg aaacgtcacg cgaagaaact
     4741 ggctcgcgaa aacgcacgcc gcactcgtct gtactaattc cccgagagcg ttgctctccg
     4801 atcagaccga gttgtagttg taaggccgtg cttccgaaag gaatgcgcgg cttattttcg
     4861 tttatgaatt gctaaaaatc ggggcctatg gctggacgaa tcccacgcgt attcattaat
     4921 gatctactgg cacgcactga catcgtcgat ctgatcgatg cccgtgtgaa gctgaaaaag
     4981 cagggcaaga atttccacgc gtgttgtcca ttccacaacg agaaaacccc gtcattcacc
     5041 gttaacggtg agaaacagtt ttaccactgc tttggatgtg gcgcgcacgg caacgcgatc
     5101 gacttcctga tgaactacga caagcttgag ttcgtcgaaa cggtcgaaga gctggcagca
     5161 atgcacaatc ttgaagtgcc atttgaagca ggcagcggcc ccagccagat cgagcgccat
     5221 cagaggcaaa cgctttatca gttgatggac ggtctgaata cgttttacca acaatcttta
     5281 caacaacctg ttgccacgtc tgcgcgccag tatctggaaa aacgcggatt aagccacgag
     5341 gttatcgctc gctttgcgat tggttttgcg ccccccggct gggacaacgt cctgaagcgg
     5401 tttggcggca atccagaaaa tcgccagtca ttgattgatg cggggatgtt ggtcactaac
     5461 gatcagggac gcagttacga tcgtttccgc gagcgggtga tgttccccat tcgcgataaa
     5521 cgcggtcggg tgattggttt tggcgggcgc gtgctgggca acgatacccc caaatacctg
     5581 aactcgccgg aaacagacat tttccataaa ggccgccagc tttacggtct ttatgaagcg
     5641 cagcaggata acgctgaacc caatcgtctg cttgtggtcg aaggctatat ggacgtggtg
     5701 gcgctggcgc aatacggcat taattacgcc gttgcgtcgt taggtacgtc aaccaccgcc
     5761 gatcacatac aactgttgtt ccgcgcgacc aacaatgtca tttgctgtta tgacggcgac
     5821 cgtgcaggcc gtgatgccgc atggcgagcg ctggaaacgg cgctgcctta catgacagac
     5881 ggccgtcagc tacgctttat gtttttgccg gatggcgaag accctgacac gctggtacga
     5941 aaagaaggta aagaagcgtt tgaagcgcgg atggagcagg cgatgccact ctccgcattt
     6001 ctgtttaaca gcctgatgcc gcaagttgat ctgagtaccc ctgacgggcg cgcacgtttg
     6061 agtacgctgg cactgccatt gatatcgcaa gtgccgggcg aaacgctgcg aatatatctt
     6121 cgtcaggaat taggcaacaa attaggcata cttgatgaca gccagcttga acgattaatg
     6181 ccaaaagcgg cagagagcgg cgtttctcgc cctgttccgc agctaaaacg cacgaccatg
     6241 cgtatactta tagggttgct ggtgcaaaat ccagaattag cgacgttggt cccgccgctt
     6301 gagaatctgg atgaaaataa gctccctgga cttggcttat tcagagaact ggtcaacact
     6361 tgtctctccc agccaggtct gaccaccggg caacttttag agcactatcg tggtacaaat
     6421 aatgctgcca cccttgaaaa actgtcgatg tgggacgata tagcagataa gaatattgct
     6481 gagcaaacct tcaccgactc actcaaccat atgtttgatt cgctgcttga actgcgccag
     6541 gaagagttaa tcgctcgtga gcgcacgcat ggtttaagca acgaagaacg cctggagctc
     6601 tggacattaa accaggagct ggcgaaaaag tgatttaacg gcttaagtgc cgaagagcga
     6661 tcgggaagcc cccgacagcc gcactgagag gcagcggcaa atatataagt acgccctcgt
     6721 aattatcgtt ggcggtaaac aaccgttgga tttcagcgtt aacggctgaa ggacatcggg
     6781 tcaatcgccc aacaccaacc tcatgaaata agtgtggata ccgtcttatg gagcaaaacc
     6841 cgcagtcaca gctgaaactt cttgtcaccc gtggtaagga gcaaggctat ctgacctatg
     6901 ccgaggtcaa tgaccatctg ccggaagata tcgtcgattc agatcagatc gaagacatca
     6961 tccaaatgat caacgacatg ggcattcagg tgatggaaga agcaccggat gccgatgatc
     7021 tgatgctggc tgaaaacacc gcggacgaag atgctgccga agccgccgcg caggtgcttt
     7081 ccagcgtgga atctgaaatc gggcgcacga ctgacccggt acgcatgtac atgcgtgaaa
     7141 tgggcaccgt tgaactgttg acccgcgaag gcgaaattga catcgctaag cgtattgaag
     7201 acgggatcaa ccaggttcaa tgctccgttg ctgaatatcc ggaagcgatc acctatctgc
     7261 tggaacagta cgatcgtgtt gaagcagaag aagcgcgtct gtccgatctg atcaccggct
     7321 ttgttgaccc gaacgcagaa gaagatctgg cacctaccgc cactcacgtc ggttctgagc
     7381 tttcccagga agatctggac gatgacgaag atgaagacga agaagatggc gatgacgaca
     7441 gcgccgatga tgacaacagc atcgacccgg aactggctcg cgaaaaattt gcggaactac
     7501 gcgctcagta cgttgtaacg cgtgacacca tcaaagcgaa aggtcgcagt cacgctgccg
     7561 ctcaggaaga gatcctgaaa ctgtctgaag tattcaaaca gttccgcctg gtgccgaagc
     7621 agtttgacta cctggtcaac agcatgcgcg tcatgatgga ccgcgttcgt acgcaagaac
     7681 gtctgatcat gaagctctgc gttgagcagt gcaaaatgcc gaagaaaaac ttcattaccc
     7741 tgtttaccgg caacgaaacc agcgatacct ggttcaacgc ggcaattgcg atgaacaagc
     7801 cgtggtcgga aaaactgcac gatgtctctg aagaagtgca tcgcgccctg cagaaactgc
     7861 agcagattga agaagaaacc ggcctgacca tcgagcaggt taaagatatc aaccgtcgta
     7921 tgtccatcgg tgaagcgaaa gcccgccgtg cgaagaaaga gatggttgaa gcgaacttac
     7981 gtctggttat ttctatcgcc aagaaataca ccaaccgtgg cttgcagttc cttgacctga
     8041 ttcaggaagg caacatcggt ctgatgaaag cggttgataa attcgaatac cgccgtggtt
     8101 acaagttctc cacctacgca acctggtgga tccgtcaggc gatcacccgt tctatcgcgg
     8161 atcaggcgcg caccatccgt attccggtgc atatgattga gactatcaac aaactcaacc
     8221 gtatttctcg ccagatgctg caagagatgg gccgtgaacc gacgccggaa gaactggctg
     8281 aacgtatgct gatgccggaa gacaagatcc gcaaagtgct gaagatcgcc aaagagccaa
     8341 tctccatgga aacgccgatc ggtgatgatg aagattcgca tctgggggat ttcatcgagg
     8401 ataccaccct cgagctgccg ctggattctg cgaccaccga aagcctgcgt gcggcaacgc
     8461 acgacgtgct ggctggcctg accgcgcgtg aagcgaaagt tctgcgtatg cgtttcggta
     8521 tcgatatgaa caccgaccac acgctggaag aagtgggtaa acagttcgac gttacccgcg
     8581 aacgtatccg tcagatcgaa gcgaaggcgc tgcgcaaact gcgtcacccg agccgttctg
     8641 aagtgttgcg tagcttcctg gacgattaat cggtaggccg gatcaggcgt tacgccgcac
     8701 ccggcactag tccctctgca caaacgccac cttt
//
LOCUS       DADMJE010000164         8722 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.167, whole genome shotgun sequence.
ACCESSION   DADMJE010000164 DADMJE010000000
VERSION     DADMJE010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8722)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8722)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8722
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.167"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            132..197
                     /locus_tag="JN001_003471"
     CDS             132..197
                     /locus_tag="JN001_003471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054582.1"
                     /translation="MYIFITHFFTEYVIFKYLLPI"
     gene            336..947
                     /gene="ruvA"
                     /locus_tag="JN001_003472"
     CDS             336..947
                     /gene="ruvA"
                     /locus_tag="JN001_003472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012131997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HAY9054583.1"
                     /translation="MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQE
                     AIVFTHFVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAV
                     EREEVGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAE
                     QEAVAALVALGYKPQEASRMVSKIARPDASSETLIREALRAAL"
     gene            956..1966
                     /gene="ruvB"
                     /locus_tag="JN001_003473"
     CDS             956..1966
                     /gene="ruvB"
                     /locus_tag="JN001_003473"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017441950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HAY9054584.1"
                     /translation="MIEADRLISAGTTLPEDVADRAIRPKLLEEYVGQPQVRSQMEIF
                     IKAAKLRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLT
                     NLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGA
                     TTRAGSLTSPLRDRFGIVQRLEFYQVPDLQYIVSRSARFMGLEMSDDGALEVARRARG
                     TPRIANRLLRRVRDFAEVKHDGTISADIAAQALDMLNVDAEGFDYMDRKLLLAVIDKF
                     FGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATTRAWNHFGITPPE
                     MP"
     gene            complement(2016..2801)
                     /gene="znuB"
                     /locus_tag="JN001_003474"
     CDS             complement(2016..2801)
                     /gene="znuB"
                     /locus_tag="JN001_003474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease subunit ZnuB"
                     /protein_id="HAY9054585.1"
                     /translation="MIELLFPGWLAGIMLACAAGPLGSFVVWRRMSYFGDTLAHASLL
                     GVAFGLLLDVNPFYAVIAVTLLLAGGLVWLEKRPQLALDTLLGIMAHSALSLGLVVVS
                     LMSNIRVDLMAYLFGDLLAVTPEDLIAIAIGVVIVVAILFWQWRNLLSMTISPDLAFV
                     DGVKLQRVKLLLMLVTALTIGVAMKFVGALIITSLLIIPAATARRFARTPEQMAGVAV
                     LVGMVAVTGGLTFSAFYDTPAGPSVVLCAALLFIISMMKKQAS"
     gene            complement(2798..3553)
                     /gene="znuC"
                     /locus_tag="JN001_003475"
     CDS             complement(2798..3553)
                     /gene="znuC"
                     /locus_tag="JN001_003475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZnuC"
                     /protein_id="HAY9054586.1"
                     /translation="MTSLVSLENVSVSFGQRRVLSDVSLELKPGKILTLLGPNGAGKS
                     TLVRVVLGLVTPDEGVIKRNGKLRIGYVPQKLYLDTTLPLTVNRFLRLRPGTHKEDIL
                     PALKRVQAGHLINAPMQKLSGGETQRVLLARALLNRPQLLVLDEPTQGVDVNGQVALY
                     DLIDQLRRELDCGVLMVSHDLHLVMAKTDEVLCLNHHICCSGTPEVVSLHPEFISMFG
                     PRGAEQLGIYRHHHNHRHDLQGRIVLRRGNDRS"
     gene            3632..4564
                     /gene="znuA"
                     /locus_tag="JN001_003476"
     CDS             3632..4564
                     /gene="znuA"
                     /locus_tag="JN001_003476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein
                     ZnuA"
                     /protein_id="HAY9054587.1"
                     /translation="MLHKKTLLFAALSAALWGGATQAADAAVVASLKPVGFIASAIAD
                     GVTETEVLLPDGASEHDYSLRPSDVKRLQNADLVVWVGPEMEAFMQKPVSKLLGAKQV
                     TIAQLEDVKLLLMKSIHGDDDDHDHAEKSEEDHHHGDFNMHLWLSPEIARATAVAIHG
                     KLVELMPQSRAKLDANLKDFEAQLASTETQVGNELAPLKGKGYFVFHDAYGYFEKQFG
                     LTPLGHFTVNPEIQPGAQRLHEIRTQLVEQKATCVFAEPQFRPAVVESVARGTSVRMG
                     TLDPLGTNIKLGKTSYSEFLSQLANQYASCLKGD"
     gene            4580..5902
                     /gene="mepM"
                     /locus_tag="JN001_003477"
     CDS             4580..5902
                     /gene="mepM"
                     /locus_tag="JN001_003477"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein DD-endopeptidase MepM"
                     /protein_id="HAY9054588.1"
                     /translation="MQQIARSVALAFNNLPRPHRVMLGSLTVLTLAVAVWRPYVYHRD
                     ATPIVKTIELEQNEIRSLLPEASEPIDQAAQEDEAIPQDELDDKIAGEAGVHEYVVST
                     GDTLSSILNQYGIDMGDITQLAAADKELRNLKIGQQLSWTLTADGELQRLTWEVSRRE
                     TRTYDRTAANGFKMTSEMQQGEWVNNLLKGTVGGSFVASARNAGLTSAEVSAVIKAMQ
                     WQMDFRKLKKGDEFAVLMSREMLDGKREQSQLLGVRLRSEGKDYYAIRAEDGKFYDRN
                     GTGLAKGFLRFPTAKQFRISSNFNPRRTNPVTGRVAPHRGVDFAMPQGTPVLSVGDGE
                     VVVAKRSGAAGYYVAIRHGRSYTTRYMHLRKILVKPGQKVKRGDRIALSGNTGRSTGP
                     HLHYEVWINQQAVNPLTAKLPRTEGLTGSDRREFLAQAKEIVPQLRFD"
     gene            6022..6993
                     /gene="lpxM"
                     /locus_tag="JN001_003478"
                     /gene_synonym="msbB"
     CDS             6022..6993
                     /gene="lpxM"
                     /locus_tag="JN001_003478"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416369.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY9054589.1"
                     /translation="METKKNNSEYIPEFDKSFRHPRYWGAWLGVAAMVGIALTPPKFR
                     DPILARLGRFAGRLGKSSRRRALINLSLCFPERSEAEREAIVDEMFATAPQAMAMMAE
                     LAIRGPEKIQPRVDWQGLQIIEEMRRNNEKVIFLVPHGWAVDIPAMLMASQGQKMAAM
                     FHNQGNPVFDYVWNTVRRRFGGRLHARNDGIKPFIQSVRQGYWGYYLPDQDHGPEHSE
                     FVDFFATYKATLPAIGRLMKVCRARVVPLFPIYDGKTHRLTIQVRPPMDDLLEADDHT
                     IARRMNEEVEIFVGPRPEQYTWILKLLKTRRPGEIQPYKRKDLYPIK"
     gene            complement(7082..>8722)
                     /locus_tag="JN001_003479"
     CDS             complement(7082..>8722)
                     /locus_tag="JN001_003479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000281525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HAY9054590.1"
                     /translation="IDGLPHVDFSRVDKFFTYADAFRESLPIISGELYFEAHQGCFTS
                     ESATKAHNRNMENKLHDAEFFTTITNNMTSILRSEFDEIWKEMLTLQFHDILPGSCIS
                     RVYLETEKEYIKLEAKTEKIISDTQSTLLSKIDTSSYKDPHILFNTTCFARNEWININ
                     NNWLKARVNSYGYAVIDPKNKIVNGLKAESRSIENNYIKLLFSENGDLISLYDKRYGK
                     EYITENMHSEIRAYHEDAGFFAAWDFASNYRDGESYVLLAEKMTTVISGPKTTMTLIY
                     HYNSSYLRFAFTLTQDSPRVDVQTFIDWHEPNVSLKVKFPVSVQTSLAQCQIQFGVID
                     RPTHSDDSFAFAKDEIPAHHWVDLSDRETGIALIAKNKYGYRVKDQTLELTLLRSQHK
                     PGEIVKTDNYDNFLINNFADIGKQKFIFSLFPHHGDYRVGGVINQAYIMNHPLQVVPV
                     KPHPGELPPSLSFFAIDTNSVIIETIKLAEDGDGIIVRLYESHGLEISAMLSWVCNYH
                     YVQYVDLQENKLDDSFYCNQYCNLEFKPFEIITLRLTQ"
BASE COUNT         2375 a         2012 c         2127 g         2208 t
ORIGIN      
        1 cacctataca tgtaaagacg atatctccaa tttcatattc agcagggtaa ttaatattca
       61 cgttgtcatt ccattgaaat agatacgaat atacgtaata gcataaaaaa attatttttt
      121 caggaggtgc aatgtatatt tttattacgc atttcttcac tgaatacgta atatttaaat
      181 atttgcttcc aatataacct gtagaataaa tcatactgcg ccatttttca gttcatcgag
      241 acacctcgca agttttcttc atccttcgct ggatatctat ccagcatttt tttatcatac
      301 agcattatct ttgattcatt acgcaggagc gtcatgtgat aggcagactc agaggcatca
      361 tcattgaaaa acaacccccg ctggtgttaa ttgaagtggg cggcgtaggc tatgaagtgc
      421 atatgccgat gacctgtttt tatgaactcc ctgaagcggg tcaggaagcg atcgttttca
      481 cccactttgt ggtgcgtgaa gacgcgcaac tgctgtacgg ttttaacaat aaacaagagc
      541 gcacattgtt caaagagttg atcaaaacca acggcgtcgg cccgaagttg gcgctggcga
      601 tcctctccgg aatgtcagcg cagcagttcg ttaatgccgt tgaacgtgaa gaagtggggg
      661 cactggtgaa actgccgggt attggcaaaa aaaccgccga acgcttgatt gttgaaatga
      721 aagaccgatt taaaggtttg catggcgatc tgtttacccc tgccgccgac ctggtactca
      781 catcacctgc cagcccggcg accgacgatg ctgaacagga agcggttgcc gcgctggtgg
      841 cgctgggcta taaaccacaa gaagcaagcc gcatggtgag caaaatcgct cgccctgacg
      901 ccagcagtga aacattaatt cgcgaagccc tacgcgccgc gttatgaggt aaaggatgat
      961 tgaagcagac cgtctgattt ctgccggtac cactttgccg gaagatgtag cagatcgcgc
     1021 cattcgccct aaattactgg aagagtatgt tggtcagccg caggttcgtt cacagatgga
     1081 gattttcatc aaagcagcga aactgcgcgg cgatgccctc gatcatttgt tgatttttgg
     1141 tcctccgggg ttgggtaaaa ctacgcttgc caacattgtc gccaatgaaa tgggcgttaa
     1201 tttacgcacg acttctggtc cggtgctgga aaaggcgggc gatctggcag cgatgctcac
     1261 taaccttgaa ccgcatgacg tgctgtttat tgatgagatc caccgtttat cgccagttgt
     1321 tgaagaagtg ctgtacccgg caatggaaga ctaccaactg gatatcatga ttggtgaagg
     1381 tccggcggca cgctccatta aaattgattt gccgccgttt accctgattg gcgcaaccac
     1441 gcgcgcaggt tcgctgacat caccgttgcg cgaccgtttt ggtattgtgc aacgtctgga
     1501 gttttatcag gtgccggatc tgcaatatat cgttagtcgc agtgcacgct ttatggggct
     1561 tgagatgagt gatgacggcg cgctggaagt tgctcgtcgc gctcgcggta cgccacgtat
     1621 tgccaaccgt ctgctgcgtc gagtgcgtga tttcgccgaa gtgaagcacg atggcaccat
     1681 ctcggcagat atcgctgctc aggcgctgga catgttgaat gtcgatgctg aaggtttcga
     1741 ttatatggac cgcaaattgt tgctggcggt aatcgataag ttctttggtg ggccggtagg
     1801 tctggataac ctggcggcgg ctattggcga agaacgtgaa accattgagg atgtgctgga
     1861 accttatttg attcagcaag gctttttgca gcgtacaccg cgtgggcgta tggcgacgac
     1921 gcgggcgtgg aatcactttg gcataacgcc gccagaaatg ccgtaagtcg gattggtcgc
     1981 tcgcgccgca tccgacaaat gtgttcagcg atagattagc tggcctgctt tttcatcata
     2041 ctgataataa ataacagtgc tgcacatagc accaccgacg gacccgccgg cgtatcgtaa
     2101 aatgcggaaa aggttaaacc gcccgttacg gcaaccatcc ccaccaacac agcgacacct
     2161 gccatctgtt ccggcgtgcg ggcaaagcga cgtgcagtag cagcaggaat aatcagcagt
     2221 gaagtaataa tcaacgcgcc aacaaatttc atcgctacac caatcgtcaa tgccgtcacc
     2281 agcatcaaca acaatttcac gcgctgtaat ttcacaccat caacaaacgc cagatccggg
     2341 ctaatcgtca tcgacagcaa attgcgccat tgccagaaca aaatagccac cacgatgacc
     2401 acgccaatcg caatagcgat gagatcttct ggcgtcactg ccagcaaatc accgaacagg
     2461 taagccatca aatcaacacg aatgttagac atcagactaa cgaccaccag gcccagcgac
     2521 agggcactgt gcgccataat ccctaataac gtgtcaagcg ccagctgtgg acgtttctcc
     2581 agccatacca gaccgcccgc caggagcagc gtaacggcaa ttaccgcata gaatggattc
     2641 acgtccagca acaaaccaaa cgcgacgcca agtaatgagg catgagccag cgtatcaccg
     2701 aaataagaca tacgacgcca gactacaaac gaacccagcg gacccgcggc acaggcgagc
     2761 atgatcccgg ctaaccaacc gggaaataat aattcaatca tgagcgatca tttccccgac
     2821 gcaaaacaat tcgtccctgt aaatcgtgac gatgattatg atgatggcga tagataccca
     2881 gttgttcagc accacgagga ccaaacatag aaataaactc cggatgtagg gaaacaactt
     2941 ccggtgtgcc ggaacaacaa atgtggtgat tcagacacag cacttcatcg gtttttgcca
     3001 ttaccagatg cagatcgtga gagaccatta aaacgccaca atccagttcg cgacgcaact
     3061 ggtcaataag gtcatataac gccacctggc catttacatc cacgccttga gtgggttcat
     3121 ccagcactaa taattgcggt cgatttaaca atgctcgcgc taacagtaca cgctgtgttt
     3181 cgccaccaga gagcttttgc atcggtgcgt taatcagatg cccggcctgg acacgtttca
     3241 gtgcaggcaa aatatcttct ttatgtgtgc cagggcgtaa gcgtaaaaaa cggtttacgg
     3301 tcagtggcaa cgtggtgtcg agatacagct tctgcggtac atagccgatg cgtagttttc
     3361 cgttgcgctt gataacccct tcatcgggtg ttaccagccc gagcactacc cgtaccagtg
     3421 tcgacttacc tgcgccattt ggcccaagta aagtcaaaat ttttccaggt ttaagttcca
     3481 gcgacacatc agagaggacg cggcgttggc caaaagaaac tgagacattt tccagggaaa
     3541 ccagacttgt catgttaatt ttagtcttgc agtagtcatg agatgttata atatcacact
     3601 tctcatattc attacgatga ttggtcgcat tatgttacat aaaaaaacgc ttcttttcgc
     3661 agcattatcc gccgctctct ggggaggtgc aacacaggcc gcagatgccg ccgttgtcgc
     3721 ttcgcttaaa cccgttgggt tcatcgcttc tgccattgct gatggtgtaa cagaaacgga
     3781 ggttttactg cctgacggcg cttcagaaca tgattattca ctgcgtccat cggatgtaaa
     3841 acgcttacag aacgcggact tagtcgtttg ggttggcccg gagatggaag cgtttatgca
     3901 aaaaccggta agcaaattac taggagcgaa gcaggtaacg attgcgcagc ttgaagatgt
     3961 gaaactgcta ctgatgaaaa gtattcacgg cgatgatgat gatcacgacc acgcggaaaa
     4021 aagtgaagaa gatcaccatc acggcgattt caacatgcat ctttggcttt ccccagagat
     4081 agcgcgggct acagcggttg caatccatgg aaaattagtg gaacttatgc cgcaaagtcg
     4141 agccaaactt gacgccaacc tgaaggattt tgaggcacaa ttagcctcaa ccgaaacgca
     4201 ggttggtaac gagctcgcgc cgctcaaggg gaaaggttat ttcgtttttc acgatgctta
     4261 cggctatttc gaaaaacagt tcggactgac accgcttggt cattttaccg ttaaccctga
     4321 gattcaacct ggcgcgcagc gtttacatga aataagaaca cagttggttg agcaaaaagc
     4381 aacctgcgtt tttgctgagc cacagttcag gccagcggtc gttgagagcg tcgcacgagg
     4441 gacatccgtt cgtatgggaa cgttggatcc cttggggacg aatatcaaac tgggtaaaac
     4501 aagctattca gaattcctga gtcaattagc caaccagtat gcgagctgcc tgaaaggaga
     4561 ttaatgagga agtgattacg tgcaacagat agcccgctct gtcgccctgg cgtttaataa
     4621 tttaccgcga ccacaccgcg ttatgttggg gtcgctcacc gttcttactc tggccgtcgc
     4681 tgtctggcgg ccctatgttt atcaccgcga tgccacgcca attgtcaaaa ccattgagct
     4741 ggaacagaac gaaattcgtt cgctcttacc tgaagccagt gagccgattg atcaagctgc
     4801 acaagaagat gaagccattc cccaggacga actggatgac aaaatcgccg gtgaagcggg
     4861 cgtgcatgaa tatgttgttt ccactggcga tacgctaagc agcattctca atcagtatgg
     4921 tattgatatg ggtgatatca cccaactggc tgcggccgac aaagaattgc gtaacctgaa
     4981 aatcggtcaa caactctcct ggacattaac cgcggacggc gaactgcagc gcctcacctg
     5041 ggaagtgtct cgtcgtgaaa cccgaaccta tgaccgtact gccgctaacg gttttaaaat
     5101 gaccagcgaa atgcagcaag gagagtgggt taacaatctg ctgaaaggta ccgtcggagg
     5161 gagctttgtt gccagcgcca gaaacgccgg tttaaccagc gccgaagtga gcgcagtgat
     5221 taaagccatg cagtggcaaa tggatttccg caaactgaaa aaaggcgatg aatttgcggt
     5281 gttaatgtct cgagagatgc ttgatggtaa acgtgagcaa agccagctgc tgggcgtacg
     5341 tttgcgttca gaaggtaaag attattacgc aatccgcgct gaggatggca aattctacga
     5401 ccgtaacggt actggtctgg cgaaaggatt cttgcgattc ccgacggcga aacagttccg
     5461 tatctcgtct aactttaacc cgcgtcgtac taatccggtg accggtcgcg ttgcaccaca
     5521 cagaggtgtt gatttcgcca tgccgcaggg tacgccagtg ctttcagtgg gtgacggtga
     5581 agtggtggtt gccaaacgca gtggcgcagc aggttattat gtggctattc gtcatggtcg
     5641 cagctacacc acgcgttata tgcacttgcg caagattctg gtgaaaccgg gacagaaggt
     5701 gaaacgtggc gaccgtatcg cgctttccgg taataccgga cgttcaaccg ggccgcatct
     5761 gcactatgaa gtatggataa accagcaggc cgtaaacccg ctgacggcaa aactgccgcg
     5821 taccgaaggg ctgaccggct ccgatcgtcg cgaattcctg gcgcaggcca aagagattgt
     5881 gccgcagcta cggtttgatt aattaacatc cattcgcagc cggtacgcag tcagtaccgg
     5941 ctttttttat ttggtgcggg gcaagttgcg ccgctacact atcaccagat tgatttttgc
     6001 cttatccgaa actggaaaag catggaaacg aaaaaaaata atagcgaata cattcctgag
     6061 tttgataaat cctttcgcca cccgcgctac tggggagcat ggctgggcgt agcagcgatg
     6121 gtgggtatcg ctttaacgcc gccaaagttc cgtgatccca ttctggcacg gctgggacgt
     6181 tttgccggac gactgggaaa aagctcacgc cgtcgtgcgt taatcaatct gtcgctctgc
     6241 tttccagaac gtagtgaagc tgaacgcgaa gcgattgttg atgagatgtt tgccaccgcg
     6301 ccgcaagcga tggcaatgat ggctgagttg gcaatacgcg gaccggagaa aattcagccg
     6361 cgcgttgact ggcaagggct gcagatcatc gaagagatga ggcgtaataa cgagaaagtt
     6421 atctttctgg tgccgcacgg ttgggccgtc gatattcctg ccatgctgat ggcctcgcaa
     6481 gggcagaaaa tggcagcgat gttccataat cagggcaacc cggtttttga ttatgtctgg
     6541 aacacggtgc gtcgtcgctt tggcggtcgt ctgcatgcga gaaatgacgg tattaaacca
     6601 ttcatccagt cggtacgtca ggggtactgg ggatattatt tacccgatca ggatcatggc
     6661 ccagagcaca gcgaatttgt ggatttcttt gccacctata aagcgacgtt gcccgcgatt
     6721 ggtcgtttga tgaaagtgtg ccgtgcgcgc gttgtaccgc tgtttccgat ttatgatggc
     6781 aagacgcatc gtctgacgat tcaggtgcgc ccaccgatgg atgatctgtt agaggcggat
     6841 gatcatacga ttgcgcggcg gatgaatgaa gaagtcgaga tttttgttgg tccgcgacca
     6901 gaacaataca cctggatact aaaattgctg aaaactcgca gaccgggcga aatccaaccg
     6961 tataagcgta aagatcttta tcctatcaaa taaaaaaaag cctctcaaat tattgagagg
     7021 ctgtactcga taaaaaatct caatgagtgt tcccactatt ttgagttttt aggttagtac
     7081 gctattgagt taatcgtagc gtgataattt caaaaggttt gaactcaaga ttgcaatatt
     7141 gattgcaata aaaactgtca tctaacttat tttcttgaag atcgacatat tgaacgtagt
     7201 gataattaca tacccacgaa agcatggctg aaatttctaa tccatgactc tcatataatc
     7261 ttacgattat accgtcgccg tcttcagcta attttattgt ttcgatgata acgctgttag
     7321 tatcgatagc aaaaaatgat agtgaagggg gtaattcacc cgggtgcggt ttgacaggga
     7381 cgacctgtaa gggatgattc attatatagg cttgattaat aacaccaccc acacggtaat
     7441 ctccatgatg aggaaataag gagaatatga atttttgttt accaatatct gcaaaattat
     7501 taatcaggaa attatcataa ttgtctgtct taacaatttc cccaggttta tgctgcgaac
     7561 gcagcaaagt taattcaagc gtctggtctt tgacacgata gccatatttg ttttttgcta
     7621 ttaaagctat gccagtttct cgatcagaaa ggtcgaccca gtgatgtgct ggtatttcat
     7681 ctttggcaaa agcgaacgaa tcatcgctat gcgttggtct gtcaattaca ccgaactgaa
     7741 tttgacattg tgcaagagat gtttgtactg acaccgggaa tttgactttg agagaaacat
     7801 taggttcgtg ccaatcaata aaagtttgga catcaacgcg tggactgtcc tgtgtcaggg
     7861 taaatgcgaa gcgaagataa gaggaattgt agtgataaat cagcgtcatc gtagttttag
     7921 gcccgctgat tacagttgtc attttttcag cgagtaaaac atatgattcc ccatcacgat
     7981 aatttgaagc aaaatcccag gccgcgaaaa aacctgcatc ttcgtggtat gcacggatct
     8041 cactgtgcat attttcagta atgtattctt taccatatct tttatcatat agcgaaatta
     8101 aatcaccgtt ttctgaaaaa agaagtttaa tgtaattatt ttcaatactt cgagattctg
     8161 ccttcagacc atttacgatc ttattctttg gatcaatcac agcataacca taagagttta
     8221 ctcgtgcttt gagccagttg ttgtttatat tgatccattc gttacgagca aaacaggtgg
     8281 tattaaataa aatgtgcgga tctttataag aagaagtatc aattttactt aataaagtag
     8341 actgcgtatc agaaataatt ttctcggttt ttgcttctag tttaatatat tccttttcag
     8401 tttcaagata aactcttgaa atacatgatc cgggaaggat gtcatggaat tgcaaggtca
     8461 gcatctcttt ccatatttca tcaaactcac tgcgaagaat tgatgtcata ttattagtaa
     8521 tagttgtaaa aaattcagca tcatgtaatt tattttccat atttcgatta tgagctttag
     8581 ttgctgactc tgatgtaaag cacccttgat gagcctcgaa ataaagttca cctgaaataa
     8641 tgggcaagct ttcgcgaaaa gcgtcggcgt aagtgaagaa cttatcaaca cggctgaaat
     8701 caacatgagg taagccatca at
//
LOCUS       DADMJE010000165         8597 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.168, whole genome shotgun sequence.
ACCESSION   DADMJE010000165 DADMJE010000000
VERSION     DADMJE010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8597)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8597)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8597
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.168"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..183
                     /locus_tag="JN001_003480"
     CDS             <1..183
                     /locus_tag="JN001_003480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312842.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
                     /protein_id="HAY9054591.1"
                     /translation="EAIKRLNKLRGWRKVSRSAILREAVEQYLERQQFPVRKAKGGRQ
                     KGEVVGVDDQCKEHKE"
     gene            402..644
                     /locus_tag="JN001_003481"
     CDS             402..644
                     /locus_tag="JN001_003481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709694.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054592.1"
                     /translation="MNSLAGIDMGRILLDLSNEVIKQLDDLEVQRNLPRADLLREAVD
                     QYLINQSQTARTSVPGIWQGCEEDGVEYQRKLREEW"
     gene            complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JN001_003482"
     CDS             complement(974..1903)
                     /gene="fdhE"
                     /locus_tag="JN001_003482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory protein FdhE"
                     /protein_id="HAY9054593.1"
                     /translation="MSIRIIPQDELGSSEKRTADMIPPLLFPRLKNLYNRRAERLREL
                     AENNPLDDYLRFAALIAHAQEVVLYDHPLEMDLTARIKEASAQGKPPLDIHVLPRDKH
                     WQKLLMALIAELKPEMSGPALAVIENLEKASTQELEDMASALFASDFSSVSSDKAPFI
                     WAALSLYWAQMANLIPGKARAEYGEQRQYCPVCGSMPVSSMVQIGTTQGLRYLHCNLC
                     ETEWHVVRVKCSNCEQSGKLHYWSLDDEQAAIKAESCDDCGTYLKILYQEKEPKVEAV
                     ADDLASLVLDARMEQEGYARSSINPFLFPGEGE"
     gene            complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JN001_003483"
     CDS             complement(1900..2535)
                     /gene="fdoI"
                     /locus_tag="JN001_003483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase cytochrome b556 subunit"
                     /protein_id="HAY9054594.1"
                     /translation="MKRRDTIVRYTAPERINHWITAFCFILAAVSGLGFLFPSFNWLM
                     QIMGTPQLARILHPFVGVVMFASFIIMFFRYWHHNLINRDDIFWAKNIRKIVVNEEVG
                     DTGRYNFGQKCVFWAAIIFLVLLLVSGVIIWRPYFAPAFSIPVIRFALMLHSFAAVAL
                     IVVIMVHIYAALWVKGTITAMVEGWVTSAWAKKHHPRWYREVRKTTEKKAE"
     gene            complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JN001_003484"
     CDS             complement(2532..3434)
                     /gene="fdxH"
                     /locus_tag="JN001_003484"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit beta"
                     /protein_id="HAY9054595.1"
                     /translation="MAYQSQDIIRRSATNGLTPAPQARDFQEEVAKLIDVTTCIGCKA
                     CQVACSEWNDIRDTVGNNIGVYDNPNDLSAKSWTVMRFSEVEQNDKLEWLIRKDGCMH
                     CSDPGCLKACPAEGAIIQYANGIVDFQSEQCIGCGYCIAGCPFDIPRLNPEDNRVYKC
                     TLCVDRVVVGQEPACVKTCPTGAIHFGTKESMKTLASERVAELKTRGYDNAGLYDPAG
                     VGGTHVMYVLHHADKPNLYHGLPENPEISETVKFWKGIWKPLAAVGFAATFAASIFHY
                     VGVGPNRADEEENNLHEEKDEERK"
     gene            complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JN001_003485"
     CDS             complement(3447..6497)
                     /gene="fdnG"
                     /locus_tag="JN001_003485"
                     /EC_number="1.17.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_except=(pos:complement(5910..5912),aa:Sec)
                     /transl_table=11
                     /product="formate dehydrogenase-N subunit alpha"
                     /protein_id="HAY9054596.1"
                     /translation="MQVSRRQFFKICAGGMAGTTAAALGFAPSVALAETRQYKLLRTR
                     ETRNTCTYCSVGCGLLMYSLGDGAKNAKASIFHIEGDPDHPVNRGALCPKGAGLVDFI
                     HSESRLKFPEYRAPGSDKWQQISWEEAFDRIAKLMKEDRDANYIAQNAEGVTVNRWLS
                     TGMLCASASSNETGYLTQKFSRALGMLAVDNQARVUHGPTVASLAPTFGRGAMTNHWV
                     DIKNANLVVVMGGNAAEAHPVGFRWAMEAKIHNGAKLIVIDPRFTRTAAVANYYAPIR
                     SGTDIAFLSGVLLYLLNNEKFNREYTEAYTNASLIVREDYGFEDGLFTGYDAEKRKYD
                     KSSWTYELDENGFAKRDTTLQHPRCVWNLLKQHVSRYTPDVVENICGTPKDAFLKVCE
                     YIAETSAHDKTASFLYALGWTQHSVGAQNIRTMAMIQLLLGNMGMAGGGVNALRGHSN
                     IQGLTDLGLLSQSLPGYMTLPSEKQTDLQTYLTANTPKPLLEGQVNYWGNYPKFFVSM
                     MKAFFGDKATAENSWGFDWLPKWDKGYDVLQYFEMMKEGKVNGYICQGFNPVASFPNK
                     NKVIGCLSKLKFLVTIDPLNTETSNFWQNHGELNEVDSSKIQTEVFRLPSTCFAEENG
                     SIVNSGRWLQWHWKGADAPGIALTDGEILSGIFLRLRKMYAEQGGANPDQVLNMTWNY
                     AIPHEPKSEEVAMESNGKALADITDPATGAVIVKKGQQLSSFAQLRDDGTTSCGCWIF
                     AGSWTPEGNQMARRDNADPSGLGNTLGWAWAWPLNRRILYNRASADPQGNPWDPKRQL
                     LKWDGTKWTGWDIPDYSAAPPGSGVGPFIMQQEGMGRLFALDKMAEGPFPEHYEPFET
                     PLGTNPLHPNVISNPAARIFKDDAEALGKADKFPYVGTTYRLTEHFHYWTKHALLNAI
                     LQPEQFVEIGESLANKLGIAQGDTVKVSSNRGYIKAKAVVTKRIRTLKANGKDIDTIG
                     IPIHWGYEGVAKKGFIANTLTPFVGDANTQTPEFKSFLVNVEKV"
     gene            6691..7524
                     /gene="fdhD"
                     /locus_tag="JN001_003486"
     CDS             6691..7524
                     /gene="fdhD"
                     /locus_tag="JN001_003486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HAY9054597.1"
                     /translation="MKKTQRKEIENVTNITGVRQIELWRRDDLQHPRLDEVAEEVPVA
                     LVYNGISHVVMMASPKDLEYFALGFSLSEGIIESPRDIFGMDVVPSCNGLEVQIELSS
                     RRFMGLKERRRALAGRTGCGVCGVEQLNDIGKPVQPLPFTQTFDLNKLDDALRHLNDF
                     QPVGQLTGCTHAAAWMLPSGELVGGHEDVGRHVALDKLLGRRSQEGESWQQGAVLVSS
                     RASYEMVQKSAMCGVEILFAVSAATTLAVEVAERCNLTLVGFCKPGRATVYTHPQRLS
                     N"
     gene            7677..>8597
                     /locus_tag="JN001_003487"
     CDS             7677..>8597
                     /locus_tag="JN001_003487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY9054598.1"
                     /translation="MKRNLLSSAIIVAIMALGLTGCDDKKAETETPPPANSQPAAPAP
                     EAPVAKAEAKPETPAQPVVDEQAVFDEKMDVYIKCYNKLQIPVQRSLARYVDWLKDFK
                     QGPTGEERTVYGIYGISESNLAECEKGVKSAVALTPALQPIDGVAVSYIDAAVALGNT
                     INEMDKYYTQENYKDDAFAKGKTLHQTFLKNLEAFEPVAESYHAAIQEINDKRQLAEL
                     KNIEEREGKIFHYYSLAVMISAKQINNLISQEKFDVDAAMKKVSELETLVAQAKEADK
                     GGMNFSFINSAGQYQLEAKKYVRRIRDKVPY"
BASE COUNT         2047 a         2176 c         2275 g         2099 t
ORIGIN      
        1 gaggcaatta aacggctgaa caagcttcgg ggctggcgta aggtttcacg atctgcaatt
       61 ttacgcgaag cggttgagca atatctggag cggcagcaat ttccggtgcg taaagcaaag
      121 ggaggcaggc aaaaggggga ggtagttggt gttgatgatc agtgtaagga gcataaggaa
      181 tgaaaaaaat ttttcattct tgaatataaa aaaacagatg cccttattct ggtattaata
      241 caaggctgtt ttacttgaac ttataataac tgcaactgtt acatcgtatc tggaaaacgc
      301 ctcgcaaaaa taaaaaatga tgcgtaaatg agctttcttt aaagattcgg caagggtact
      361 tttctctcca tagattcaaa aatgatattg gcgagatatt tatgaactct ctggcaggta
      421 tagatatggg cagaatttta ctcgatttat cgaatgaggt gattaagcaa cttgatgatc
      481 tcgaggtgca gcgtaatctt cctcgtgcgg acctattaag ggaagcggta gatcaatacc
      541 tgataaatca atcgcaaaca gcaagaacca gtgttcctgg catctggcaa gggtgtgagg
      601 aagatggtgt cgaatatcag cgtaagctgc gcgaggaatg gtaatgggaa aaaatgatgt
      661 caatcagatt gctgacaacg tgcgcgttgt tcatgccgga tgcggcgtga acgccttatc
      721 cggcctacaa agtcatgcaa attcaatata ttgaagttta ttggtaggcc tgataagcgc
      781 agcgcatcag gcaatcatac gcttgtcatc agtgacatac ccataacctt atcgatgtgt
      841 tggagggaag aacgaggcaa acagacaatt gcggcatgat cttgaatggg taacgcggaa
      901 tacgagagat ggtgtcgtca caccctatga gctgtaatcc gggcgaccag cgccacccgg
      961 aaaacgtcag agattactcc ccttcacccg gaaacaggaa cgggttgatg gaactgcggg
     1021 catagccttc ttgctccatt cgcgcgtcca gtaccagaga agcgaggtca tctgccacgg
     1081 cttcaacttt cggttctttt tcctgataaa gaatcttcag gtaagtgccg cagtcatcgc
     1141 agctttcggc tttaatcgcg gcctgttcgt catccagcga ccagtaatgc agtttgccgc
     1201 tctgttcaca gttgctgcat tttacgcgca ctacgtgcca ttcggtttca cacaggttgc
     1261 agtgcaggta acgcagaccc tgagtggtgc caatttgcac catgctggac accggcatag
     1321 aaccacaaac cgggcaatat tgacgttgct cgccgtattc agcgcgggct ttgccgggga
     1381 tcagattggc catctgcgcc cagtagagcg acagtgcagc ccagataaac ggcgctttat
     1441 cgctgctgac ggatgagaaa tcagaggcaa acagtgcgct ggccatatct tccagctcct
     1501 gagtcgatgc cttctccaga ttctcaatca ctgccagcgc cgggccgctc atttcaggtt
     1561 tcagctcagc aatcagcgcc atcagcagct tttgccagtg cttatcacgc ggcagaacgt
     1621 gaatatccag cgggggcttg ccctgtgcgc tggcttcttt aatgcgcgcg gtcagatcca
     1681 tctccagcgg atggtcgtac agcaccactt cctgggcgtg ggcgataagc gcagcaaagc
     1741 gcaggtaatc atccagcgga ttattttctg ccagctcgcg cagacgctcg gcgcggcggt
     1801 tgtataaatt cttgagccga gggaacaata acggcggaat catatccgcc gtacgtttct
     1861 cgctcgaacc cagctcatct tgcgggatta tgcgaatact cattcagctt tcttttccgt
     1921 tgtcttgcgg acctcacggt accagcgcgg gtgatgtttc ttcgcccagg cgctggtaac
     1981 ccatccttcc accatggcgg taatcgtgcc tttcacccaa agggcggcgt agatatgcac
     2041 catgataacc acaattaacg ccactgcggc aaatgaatgc agcattaacg cgaatcggat
     2101 caccgggatt gagaaagcag gcgcaaaata aggacgccag ataatcacgc cgctcaccag
     2161 cagcagaacc aggaaaataa tcgccgccca gaaaacgcat ttctgaccga agttataacg
     2221 cccggtgtca cctacttcct cgttgacgac gatcttacga atattcttcg cccaaaagat
     2281 atcatcccga ttgattaggt tgtgatgcca gtaacggaaa aacatgatga tgaacgaggc
     2341 aaacataacc acgccgacaa acgggtgcag aattcgcgcc agctgcggtg tgcccatgat
     2401 ttgcatcaac cagttgaagg acgggaacaa aaagcccagc ccgctcaccg ccgctaggat
     2461 gaagcagaag gcggtgatcc agtggttgat acgttccggc gcggtgtagc gcacgatggt
     2521 gtcacgtcgt ttcatttgcg ctcctcgtct ttctcttcgt gcagattatt ctcttcctca
     2581 tccgcacggt tcggaccgac acccacgtag tggaagatac tggctgcgaa ggtagccgca
     2641 aagccaacag ctgcgagcgg tttccagatg cctttccaga atttcacggt ttcgctgatt
     2701 tccgggttct ccggcaagcc atgatacaga tttggcttgt cagcatggtg cagcacgtac
     2761 ataacgtgtg taccaccgac gcctgccgga tcgtacaggc ccgcattgtc gtaaccgcgg
     2821 gttttcagct ccgccacgcg ctcgctcgcc agcgttttca tcgactcttt cgtaccgaag
     2881 tgaatcgcgc ccgttgggca ggtcttcacg caggctggtt cttgcccaac caccacgcgg
     2941 tcaacgcaca gcgtacattt gtagacgcgg ttgtcttccg ggttgaggcg cggaatgtcg
     3001 aacggacagc ccgcaatgca ataaccgcag ccaatgcact gctcggactg gaagtcgacg
     3061 ataccgttgg catactgaat aattgcacct tccgccgggc acgctttcag acagcctgga
     3121 tcggaacagt gcatacagcc gtctttgcgg atcagccatt ccagtttgtc gttctgctcc
     3181 acttccgaga agcgcatcac cgtccacgat ttggcactta aatcattggg gttgtcgtac
     3241 accccaatgt tattgccgac ggtatcgcga atgtcgttcc actctgaaca cgccacctga
     3301 caggctttac agccgataca ggtggtgacg tcgatgagtt tcgccacttc ttcctggaag
     3361 tcccgcgcct gaggcgcggg ggtcagaccg ttagtcgcgg aacgacgaat gatatcttga
     3421 gattgataag ccatatgtcg tctccgttac accttttcca cattcacaag gaaggactta
     3481 aactccggcg tctgcgtgtt cgcatcacca acgaatggcg ttaaagtatt ggcaataaag
     3541 ccttttttag ctacgccttc atagccccag tgaatcggaa taccgatggt atcgatatct
     3601 ttgccgttcg ctttcagcgt gcgaatacgt ttggtcacca ccgctttggc tttgatatag
     3661 ccacggttgg aggagacttt cacggtatcg ccctgggcaa tgccaagttt attcgccagc
     3721 gactccccga tttccacaaa ctgctctggc tgcaaaatcg cgttcaacag cgcgtgtttg
     3781 gtccagtagt ggaagtgctc ggtcagacga taggtggttc cgacatacgg gaacttatcg
     3841 gctttaccca atgcttcggc gtcgtcttta aagatacgtg cagccgggtt cgagataacg
     3901 tttggatgca gcgggttagt tcccagcggc gtttcaaacg gctcgtagtg ttccgggaac
     3961 ggaccttccg ccatcttatc gagggcaaac agacgcccca tgccttcctg ctgcatgata
     4021 aacggcccga cgccgctacc cggaggcgct gcgctgtagt ccggaatatc ccagccggtc
     4081 cacttagtgc cgtcccattt cagcaactga cgcttcggat cccacgggtt accctgcgga
     4141 tctgcggagg cgcggttata cagaatgcgg cggttaagcg gccatgccca tgcccagccc
     4201 agcgtgttac cgaggccaga cggatcggcg ttatcacgac gcgccatctg gttgccttcc
     4261 ggcgtccagc taccggcgaa aatccagcag ccacaggagg ttgtaccgtc atcgcgcaat
     4321 tgggcgaacg agctaagttg ttggcctttc ttgacgataa ccgcaccggt tgccggatcg
     4381 gtaatatcgg ccagcgcctt accgttgctc tccatcgcta cttcttccga cttcggctca
     4441 tgcggaatgg cgtagttcca ggtcatgttc agcacctgat ccgggttcgc gccaccctgt
     4501 tcggcataca tcttgcgcaa gcgcaggaag ataccggaga ggatctcacc gtcagtcagc
     4561 gcaatccccg gggcgtccgc acctttccag tgccactgca accagcgacc tgagttaacg
     4621 attgaaccgt tctcttctgc gaagcaggtc gatggcagac ggaacacttc ggtctggatc
     4681 ttcgacgagt caacttcgtt cagctcaccg tggttctgcc agaagttaga ggtttcagtg
     4741 ttcagcgggt cgatggtgac gaggaacttc agtttcgaca gacaaccgat cactttgttt
     4801 ttgttcggga atgaggcaac agggttaaaa ccctggcaga tatagccatt gaccttgccc
     4861 tctttcatca tctcgaagta ttgcaggacg tcgtagcctt tatcccactt cggcaaccag
     4921 tcaaagcccc agctattttc cgccgtcgct ttatcaccaa agaaggcctt catcatagag
     4981 acgaagaatt tcgggtagtt gccccagtag tttacctggc cttccagcag cggttttggc
     5041 gtgttggcgg taaggtaggt ttgcagatcg gtctgcttct cgcttggcag cgtcatgtaa
     5101 cctggcaggc tctgcgacag cagccccagg tccgtcagcc cctgaatatt ggagtgaccg
     5161 cgcagggcgt taacgccgcc gcctgccatc cccatattgc cgagcagcag ctggatcatc
     5221 gccatcgtac gaatgttttg cgcaccaacg gagtgttgcg tccagccgag ggcatacagg
     5281 aacgaggcag ttttatcgtg agcactggtt tctgcgatgt attcgcagac tttcaggaac
     5341 gcgtcttttg gcgtaccaca gatgttttca accacatctg gcgtgtagcg ggaaacgtgc
     5401 tgtttcagca agttccacac gcagcgcgga tgttgcagcg tggtatcgcg tttggcgaag
     5461 ccgttttcgt ccagttcgta agtccaggag gatttatcgt acttgcgttt ttccgcgtca
     5521 tagccggtga aaaggccatc ttcaaagccg taatcctcac gcacgatcag gctggcgttg
     5581 gtataggctt cggtgtattc gcggttgaat ttttcattgt tcagcaggta cagcaatacg
     5641 cctgacagga aagcaatgtc agtaccggaa cgaatagggg catagtagtt agctaccgcc
     5701 gccgtacgcg taaagcgagg atcgatcaca atcagcttcg cgccgttgtg aattttggct
     5761 tccatcgccc agcggaaccc gaccgggtga gcttcagcgg cgttaccgcc catcaccacg
     5821 acgaggttgg cgttcttgat gtcgacccag tggttggtca tcgcaccgcg accaaatgtt
     5881 ggagcaagac ttgctaccgt tggtccgtgt cagacacgcg cctggttgtc gaccgcgagc
     5941 atacccagcg cgcgggagaa tttttgcgtt aaatagccgg tttcgttact cgacgcggaa
     6001 gcacacagca tcccggtgga gagccagcgg ttaacagtca cgccttcggc gttttgcgca
     6061 atgtagttag catcgcggtc ttctttcatc agtttggcga tgcgatcaaa cgcctcttcc
     6121 caactgattt gctgccattt atcagaacct ggcgcacggt attccggaaa cttcagacgg
     6181 ctttcggagt ggatgaaatc caccaggcca gcgcctttcg gacaaagtgc accgcggttg
     6241 accgggtgat ccggatcgcc ttcgatatgg aagatagatg ctttggcgtt ttttgctccg
     6301 tcaccgaggc tgtacatcaa cagcccacag cctacggaac aataggtgca ggtattacgg
     6361 gtttcgcggg tgcgcagcag tttatactgc cgggtttccg cgagtgctac gctgggtgca
     6421 aaacctagtg ccgctgccgt ggtgcctgcc ataccgccag cgcagatctt aaagaactgc
     6481 cttctgctga cctgcatgga ttgctccttg tttcgacatt gtcacgtccc atttacattc
     6541 gcttgctgcg tgtgcaggga gtgggagtta tttttctttg cggaaggggc cgcaaaggtc
     6601 cagaattggc tcgatttccc tccatccagg aagggtttgt aacagaatac cataatgttg
     6661 gtgtgtgtgt tcttatctgg ttaagagaaa gtgaaaaaaa cacagcgaaa agaaatcgaa
     6721 aatgtgacaa atatcacagg tgttcgtcaa attgagttat ggcggcgtga tgatttacaa
     6781 cacccacggt tagatgaggt cgcggaagaa gttcccgttg cgctggtcta caacggcatt
     6841 tcgcatgtgg tgatgatggc gtcgcccaaa gaccttgagt actttgcgct cggtttttcg
     6901 ctttccgagg ggattatcga aagtccgcgc gatatcttcg gcatggatgt cgttccttcc
     6961 tgtaatggtc ttgaagtaca aattgagctt tccagccgcc gctttatggg gttgaaggag
     7021 cgccgccggg cgctggcggg acgtacgggc tgtggcgtat gcggcgtgga gcaacttaat
     7081 gacatcggaa aaccggtgca gccgctaccg ttcacccaga cgtttgatct caacaaactg
     7141 gatgatgcat tacgtcatct caacgatttt cagccagtgg ggcaactgac tggttgtact
     7201 cacgccgctg cctggatgtt gccatctggc gaactggtcg gcgggcatga agacgtgggg
     7261 cgccatgtgg cgctggacaa actgttaggc cgccggtcac aagaagggga aagctggcag
     7321 caaggtgcgg tactggtttc cagtcgtgcc agttatgaaa tggtgcaaaa gtcggcgatg
     7381 tgcggcgtag agattttgtt tgcggtgtct gccgcgacca cgcttgctgt agaagtggct
     7441 gagcgctgta atctgacact ggtaggtttt tgtaaaccgg gtcgggcaac ggtttatacc
     7501 catccgcagc gtttgagcaa ttaattaaaa taagtcctgc gatatatatt aaattgcagg
     7561 acttattcat ttcgtgaatt ttattatttt tatttataaa taaacgcgtg tagtggcgtt
     7621 ttcttttttc atttattatg ttcactctct tatctatata tttataaggc aattaaatga
     7681 aaaggaattt attatcttcc gctattatag tcgccatcat ggccctcggt ctgacgggtt
     7741 gtgatgataa aaaagccgaa acagaaacgc ccccgcctgc caatagtcaa cctgccgcac
     7801 cagctcctga agctcccgtt gcaaaagcag aagctaaacc tgaaacacct gcgcaaccgg
     7861 tggtcgatga acaagcggtt ttcgacgaaa aaatggatgt ctatatcaag tgctataaca
     7921 agttacagat ccctgtacag cgcagtctgg cgcgttatgt tgactggctg aaagatttta
     7981 aacaggggcc taccggtgaa gagcgtactg tttatggcat ctacggcatt agtgaatcca
     8041 acctcgctga gtgtgaaaaa ggcgtaaaaa gtgctgtggc gttaacgcct gcgctgcaac
     8101 caattgatgg cgtggcggtg agttatatcg atgctgccgt ggcgttgggt aataccatta
     8161 acgaaatgga taaatattac acccaggaaa attataaaga cgatgcgttt gcgaaaggga
     8221 aaacgctgca ccagacattc ttaaaaaatc tggaagcctt tgaacctgta gcagaatctt
     8281 atcatgcggc gattcaggaa attaacgata agcgccagct tgcggaactg aaaaatattg
     8341 aagaaagaga agggaaaata ttccactact attctctggc agtcatgatt tcagcgaaac
     8401 aaattaataa cctgatatcg caagagaagt ttgatgttga tgcggcaatg aagaaagtgt
     8461 ctgaactgga aacgctggtg gcgcaggcca aagaagcgga taaaggcggc atgaatttct
     8521 cgtttattaa ttcggcaggc cagtatcaac tcgaggctaa aaaatacgtt cgccgcatca
     8581 gagataaagt cccgtac
//
LOCUS       DADMJE010000166         8486 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.169, whole genome shotgun sequence.
ACCESSION   DADMJE010000166 DADMJE010000000
VERSION     DADMJE010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8486
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.169"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(311..889)
                     /gene="mocA"
                     /locus_tag="JN001_003488"
     CDS             complement(311..889)
                     /gene="mocA"
                     /locus_tag="JN001_003488"
                     /EC_number="2.7.7.76"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor cytidylyltransferase"
                     /protein_id="HAY9054599.1"
                     /translation="MSAIDCIITAAGLSSRMGQWKMMLPWQQGTILDTSIKNALQFCS
                     RIILVTGYRGNELHERYVNQSNITIIHNPDYAQGLLTSVKAAVPAVQTEHCFLTHGDM
                     PTLTIDIFRKIWSLRNDGAILPLHNGIPGHPILVSKPCLMQAIKRPNITNMRQALLMG
                     AHYSVEVENAEIILDIDTPDDFITVQKRYTKI"
     gene            992..1762
                     /gene="yqeC"
                     /locus_tag="JN001_003489"
     CDS             992..1762
                     /gene="yqeC"
                     /locus_tag="JN001_003489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311776.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium-dependent hydroxylase
                     accessory protein YqeC"
                     /protein_id="HAY9054600.1"
                     /translation="MKSIVDPSALFIDLGAQKRPTVISVVGAGGKTSLLFWLAELLQA
                     SGRRVLITTTTHMFMPTSHWPVVFCRDPAMLPHASLTSPISFCFHSWKANQGKVQGFT
                     PEAIDALVQRPECDVILIEADGSRAMPLKAPDEHEPCIPKSSCCVIAVMGGHILGAKV
                     STENVHRWSQFADITGLTPDATLQLSDLVALVRHPQGAFKNVPQGCRRVWFINRFSQC
                     ENAIAQSELLQPLQQHDVEAIWLGDIQEHPAIARRFVN"
     gene            1810..3435
                     /locus_tag="JN001_003490"
     CDS             1810..3435
                     /locus_tag="JN001_003490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF2563 family selenium-dependent molybdenum
                     hydroxylase system protein"
                     /protein_id="HAY9054601.1"
                     /translation="MNIFTEAAKLEEQNCPFAMAQIVDSRGSTPRHSAQMLVRADGSI
                     VGTIGGGMVERKVIEESLQALQERKPRLFHGRMARNGADAVGSDCGGAMSVFISVHGM
                     RPRLVLIGAGHVNRAIAQSAALLGFDIAVADIYRESLNPELFPPSTTLLHAESFGAAV
                     EALDIRPDNFVLIATNNQDREALDKLIEQPIAWLGLLASRRKVQLFLRQLREKGVAEE
                     HIARLHAPVGYNIGAETPQEIAISVLAEILQVKNNAPGGLMMKPSHPSGHQLVVIRGA
                     GDIASGVALRLYHAGFKVIMLEVEKPTVIRCTVAFAQAVFDGEMTVEGVTARLATSSA
                     EAMKLTERGFIPVMVDPACSLLDELKPLCVVDAILAKQNLGTRADMAPVTIALGPGFT
                     AGKDCHAVIETNRGHWLGQVIYSGCAQENTGVPGNIMGHTTRRVIRAPAAGIMRSNVK
                     LGDLVKEGDVIAWIGEHEIKAPLTGMVRGLLNDGLAVVGGFKIGDIDPRGETADFTSV
                     SDKARAIGGGVLEALMMLMHQGVKATKEVLEVA"
     gene            complement(3476..4408)
                     /gene="arcC"
                     /locus_tag="JN001_003491"
     CDS             complement(3476..4408)
                     /gene="arcC"
                     /locus_tag="JN001_003491"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HAY9054602.1"
                     /translation="MSKKIVLALGGNALGDDLAGQMKAVKITSQAIVDLIAQGHEVIV
                     THGNGPQVGMINQAFEAAAKTEAHSPMLPMSVCVALSQGYIGYDLQNVLREELLSRGI
                     NKPVATLVTQVEVDANDPAFLNPTKPIGSFFTEQEAEQLTKQGYTLKEDAGRGYRRVV
                     ASPKPVDIIEKETVKALVDAGQVVITVGGGGIPVIREGNHLRGASAVIDKDWASARLA
                     EMIDADMLIILTAVEKVAINFGKENEQWLDRLSLSDAERFIEEGHFAKGSMLPKVEAA
                     ASFARSRAGREALITVLSKAKEGIEGKTGTVICQ"
     gene            complement(4456..5841)
                     /locus_tag="JN001_003492"
     CDS             complement(4456..5841)
                     /locus_tag="JN001_003492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311773.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-phenylhydantoinase"
                     /protein_id="HAY9054603.1"
                     /translation="MRVLIKNGTVVNADGQAKQDLLIESGIVRQLGNNISPQLPYEEI
                     DATGCYVFPGGVDVHTHFNIDVGIARSCDDFFTGTRAAACGGTTTIIDHMGFGPNGCR
                     LRHQLEVYRGYAAHKAVIDYSFHGVIQHINHAILDEIPMMVEEGLSSFKLYLTYQYKL
                     NDDEVLQALRRLHESGALTTVHPENDAAIASKRAEFIAAGLTAPRYHALSRPLECEAE
                     AIARMINLAQIAGNAPLYIVHLSNGLGLDYLRLARANHQPVWVETCPQYLLLDERSYD
                     TEDGMKFILSPPLRNVREQDKLWCGISDGAIDVVATDHCTFSMAQRLQISKGDFSRCP
                     NGLPGVENRMQLLFSSGVMTGRITPERFVELTSAMPARLFGLWPQKGLLAPGSDGDVV
                     IIDPRQSQQIQHRHLHDNADYSPWEGFTCQGAIVRTLSRGETIFCDGTFTGKAGRGRF
                     LRRKPFVPPVL"
     gene            complement(5894..7105)
                     /locus_tag="JN001_003493"
     CDS             complement(5894..7105)
                     /locus_tag="JN001_003493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YgeY family selenium metabolism-linked
                     hydrolase"
                     /protein_id="HAY9054604.1"
                     /translation="MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHR
                     IKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGME
                     TDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYII
                     EQSGIRPEFVVSTEPTDCQIYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPIL
                     GELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGAL
                     DEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEG
                     LFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMY
                     AAIPLSWLATE"
     gene            complement(7163..8359)
                     /gene="dpaL"
                     /locus_tag="JN001_003494"
     CDS             complement(7163..8359)
                     /gene="dpaL"
                     /locus_tag="JN001_003494"
                     /EC_number="4.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopropionate ammonia-lyase"
                     /protein_id="HAY9054605.1"
                     /translation="MSVFSLKIDIADNKFFNGETSPLFSQSQAKLARQFHQKIAGYRP
                     TPLCALDDLANLFGVKKILVKDESKRFGLNAFKMLGGAYAIAQLLCEKYHLDIETLSF
                     EHLKNAIGEKMTFATTTDGNHGRGVAWAAQQLGQNAVIYMPKGSAQERVDAILNLGAE
                     CIVTDMNYDDTVRLTMQHAQQHGWEVVQDTAWEGYTKIPTWIMQGYATLADEAVEQMR
                     EMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDKADCIYRSGVKGDIV
                     NVGGDMATIMAGLACGEPNPLGWEILRNCATQFISCQDSVAALGMRVLGNPYGNDPRI
                     ISGESGAVGLGVLAAVHYHPQRQSLMEKLALNKDAVVLVISTEGDTDVKHYREVVWEG
                     KHAVAP"
BASE COUNT         1999 a         2061 c         2221 g         2205 t
ORIGIN      
        1 tagcttatac agatatcatt gagtgaccgg tgttgagaaa tccggtggtt tagggggata
       61 gagcaacaat cgcaccactc ttgccaggtt tggcgggaaa tataaaaaaa tgtgaggcgg
      121 ctcgaaactt aagggctttt tgtgaatgaa ctcacaggtg ctaaatgaga attaaaatca
      181 ctcctgaaaa ttattattgc cagcccatat atcacttttt ctcttttctc aaaatcagtg
      241 attccttatc attatgataa agagtgctgg agggattaaa tatttgaacg caatcgttta
      301 actacgtttt ttaaatttta gtataccttt tttgcactgt aataaagtcg tccggagtat
      361 caatatctaa aattatttct gcattttcta cttcgacgga ataatgagct cccataagga
      421 gtgcctgacg catattggtg atattggggc gcttgattgc ctgcatcagg catggttttg
      481 acactaaaat cggatggccg gggatgccat tatggagtgg cagtattgcg ccatcatttc
      541 gtaacgacca gatttttctg aaaatatcga tggtgagggt tggcatgtca ccgtgggtga
      601 gaaaacaatg ttctgtttgc actgcgggta ctgcggcctt tactgatgtt agtaaaccct
      661 gcgcataatc tgggttgtgg ataatagtga tattgctctg gttcacataa cgttcgtgca
      721 gttcattacc acgatagccg gtgactaaaa taattcggct acaaaactgc aacgcatttt
      781 tgatacttgt atcaagaatt gtcccctgtt gccagggtaa catcattttc cattgcccca
      841 ttcttgatga taatccggca gcggtaatta tacagtcgat ggctgacata gtggttccat
      901 tatttatagg ggctaataac gcctgataat tgcgttactt cctgatggat taagttgggg
      961 ataatttatc ccagagaggt cataaagact cgtgaaaagt atagttgacc catcggcatt
     1021 attcattgat ttaggtgcgc agaaacgtcc cactgtgatt tctgttgttg gtgctggggg
     1081 gaaaaccagc ttgctttttt ggctggcaga actgctccag gctagcggca ggcgtgtgtt
     1141 aatcacgacg acaacacata tgtttatgcc aacgtctcac tggcccgtgg ttttctgtcg
     1201 tgatcccgcc atgcttcctc atgcgtctct tacatccccc atttcatttt gttttcacag
     1261 ctggaaagcg aaccagggaa aagtgcaggg atttacgcca gaagcgattg atgcactggt
     1321 gcaacgacca gagtgtgacg taattctcat tgaagcagat ggctcgcgtg caatgccgtt
     1381 aaaagcgcct gatgagcacg aaccttgcat acccaaaagc agttgctgcg tgattgctgt
     1441 gatgggagga catattttgg gcgcgaaagt gagcacagaa aatgtccatc gctggtcgca
     1501 gtttgctgat attactgggt taacacctga tgcaaccttg caactgagcg atctcgttgc
     1561 gctggttcgc caccctcagg gggcgtttaa aaacgtaccg caaggttgtc ggcgagtctg
     1621 gttcattaac cgtttttctc aatgtgagaa tgcgattgca caaagcgagc tccttcaacc
     1681 gctgcaacaa cacgacgtag aggcaatctg gctaggcgat atacaagaac atcctgcaat
     1741 cgcgcgcaga tttgtgaatt agcggcccgg gtattccggg ttactgaaag gatatccatt
     1801 gaggttggta tgaatatttt cacagaggct gcaaaactcg aagagcaaaa ttgtccgttt
     1861 gcgatggcgc aaattgttga tagccgaggc tcgactcccc gccattctgc acaaatgtta
     1921 gtgcgcgccg atggttctat cgtcggtaca attggtggcg gaatggttga gcggaaggtg
     1981 attgaagagt cacttcaggc attgcaggaa cgtaagccgc gattattcca tggacgtatg
     2041 gctcgtaacg gtgcggatgc tgtcgggtca gattgtggag gtgcaatgtc agtatttatc
     2101 agcgtccatg gtatgcgtcc acgtctggtg ttgattggcg cggggcatgt caaccgggcg
     2161 atagcccaga gtgccgcgct attaggattt gatattgccg ttgccgatat ttatcgcgaa
     2221 agcctcaatc ctgaactatt cccaccatca accacgcttc tccatgctga gtcgtttggt
     2281 gcggcagtgg aagcactgga tattcgccct gataattttg tcctgattgc cacgaataat
     2341 caggatcgtg aagccctcga caaactcatt gaacagccca ttgcatggtt ggggttgctg
     2401 gcaagtcgcc gcaaggttca gcttttcctg cgtcaattgc gtgagaaagg cgtggctgaa
     2461 gaacatattg cccgtttaca tgcgcccgtt ggttacaaca taggtgcgga aacgccgcag
     2521 gagatcgcca tcagcgtgct ggcagaaata ttacaggtga aaaataacgc gccgggtggg
     2581 ctgatgatga aaccttctca tccttccgga caccagctgg tggtgattcg cggtgcggga
     2641 gatatcgcca gtggtgtggc gctacgtctg tatcatgcgg gttttaaagt gatcatgctg
     2701 gaagtggaaa aaccgacagt gattcgttgt accgtggcgt ttgcccaggc cgtgttcgat
     2761 ggcgaaatga cggtcgaagg cgtcactgct cgcctggcaa ccagctctgc ggaagcgatg
     2821 aaacttaccg aacgcggatt catccctgtg atggtagatc ccgcctgttc attgcttgat
     2881 gaactgaaac cgctttgcgt ggtggacgct attctggcga aacagaattt gggaacgcgg
     2941 gcagatatgg caccagtaac aatcgcgctt gggccgggct ttactgcagg gaaggattgt
     3001 catgcggtaa ttgaaacaaa tcgcgggcac tggctcggtc aggtgattta ctctggttgt
     3061 gcgcaggaga ataccggtgt tcctggcaat attatggggc ataccacccg acgggtgatc
     3121 cgtgctcctg ctgcaggcat tatgcgatcc aacgtgaaat taggcgatct ggtgaaagag
     3181 ggcgatgtga ttgcctggat tggtgagcat gaaattaaag caccgttgac ggggatggtg
     3241 cgtggcttgt tgaacgacgg cctggcagtg gttggtggtt ttaaaattgg tgatatcgat
     3301 cctcgtggtg aaaccgctga tttcaccagc gtttctgata aagcccgggc gattggcggc
     3361 ggcgtacttg aggcgttaat gatgttgatg catcagggcg tgaaagcgac aaaagaagtg
     3421 ctggaagtgg cttaaatgaa aatggccgga tggtattacc cacccggcct taaaattact
     3481 gacaaatcac cgttccggtt ttgccttcaa tcccttcttt cgctttgctc aatacggtaa
     3541 tcagtgcttc acgacctgcg cgagagcgag caaacgaggc ggcagcttcc actttaggca
     3601 gcatagaacc tttcgcaaaa tgaccttctt cgataaagcg ttcagcatca cttaatgaca
     3661 ggcgatcgag ccactgttca ttctctttac cgaagttaat ggccactttt tctaccgcag
     3721 tcagaatgat cagcatatcg gcatcaatca tttctgctaa acgggcgctg gcccagtctt
     3781 tatcgataac cgcgctggca ccacgcagat ggttaccttc acgaataaca gggataccac
     3841 caccgccaac ggtgatcacc acctggcctg catctaccag agctttaaca gtttcttttt
     3901 caatgatatc aaccggtttt ggcgaggcaa caacacggcg atagccgcga ccagcatctt
     3961 ctttcagagt gtaaccctgt tttgtcagtt gctctgcttc ttgctcggta aagaacgaac
     4021 cgatcggctt ggtcgggttg aggaatgccg gatcgttagc gtcgacttcg acctgagtaa
     4081 ccagcgttgc tacaggttta ttaatgcccc gagaaagcag ttcttctctt aacacgtttt
     4141 gtagatcgta accaatataa ccctggctta aggcaacaca gacagacatc ggcagcattg
     4201 gcgagtgtgc ttcagttttt gcggcagctt caaaggcctg gttaatcatg cccacctgcg
     4261 gcccgttacc atgagtgacg ataacttcat gtccttgggc aattaaatca acaattgcct
     4321 gagaagtaat ttttaccgct ttcatttgtc cggccaggtc atcgcccagc gcattcccgc
     4381 ccagggcgag aacaattttc ttactcattt ttcctcactc atcattcttg attgtgtata
     4441 gatccctgac agtggttaga gcacgggagg gacaaacggt ttgcgtcgca ggaaacgacc
     4501 tcgcccggct ttgcctgtaa aggtgccgtc acagaaaatc gtttcaccac gggataaggt
     4561 tctgacaatc gcgccctgac aggtaaaacc ctcccatggc gagtagtcgg cgttgtcgtg
     4621 gagatggcga tgctgaattt gttggctctg acgtgggtcg ataatcacca cgtcgccatc
     4681 ggaaccgggc gctaataatc ctttttgcgg ccacaggcca aacagcctgg cgggcattgc
     4741 gctggttaat tcaacaaagc gttccggtgt tatacgtccc gtcatcacgc cactggaaaa
     4801 cagtaactgc atgcggtttt ccacaccggg taagccattt gggcagcgac tgaaatcgcc
     4861 tttagaaatt tgcaggcgtt gagccatcga gaaggtgcag tgatcggtcg ccaccacgtc
     4921 aatcgcacca tcgctgatgc cacaccacag tttgtcctgc tcgcgtacgt tacgcagcgg
     4981 tgggctaaga atgaacttca tgccatcttc tgtatcgtaa ctgcgttcgt ccaacaggag
     5041 atattgtggg caggtttcaa cccagactgg ctggtgattc gcacgggcaa gacgcagata
     5101 atccagacct aagccgttag acaggtgcac gatatagagc ggggcgttac cggcaatttg
     5161 tgccaggtta atcatgcggg cgatggcttc cgcttcgcat tccagagggc gactcaaggc
     5221 atgatagcgc ggcgcggtta accctgcggc gataaattcc gcccgcttgc tggcgatagc
     5281 cgcatcattt tccgggtgca cggtggtcag cgcgccggat tcatgcaagc ggcgtaatgc
     5341 ctgcaaaacc tcgtcatcgt tgagtttgta ttgataggtt aaatagagtt taaaactgct
     5401 cagtccttcc tcgaccatca tcgggatttc gtcgaggatt gcgtgattaa tgtgctggat
     5461 cacaccgtga aagctgtaat cgatgaccgc tttatgggcg gcataaccac gataaacctc
     5521 cagttgatgg cgtaaccgac agccgtttgg gccaaatccc atatggtcaa taatggttgt
     5581 tgtaccgcca cacgcagctg cgcgggtacc ggtaaaaaaa tcatcacaac tgcgcgcgat
     5641 gccgacatca atattgaaat gcgtatggac atccacgccg cctgggaaaa cgtaacagcc
     5701 agtggcatca atttcttcat acgggagctg cggcgaaata ttgttgccca actggcgaac
     5761 aatcccgctt tcaatcagca aatcctgttt ggcttgtcca tctgcgttaa cgacagtgcc
     5821 gtttttgatc aatacgcgca tagcaaactc caaaaaccct ccggcgaacc ggaggggaat
     5881 aagtgaagag taattactct gttgccagcc agcttaacgg gattgcagcg tacatcgcgg
     5941 cacaggtcac caggtgagat ttccaggttt tttcgttagg tgcatgcgct tcaggttctt
     6001 tacccgggcc aaagccgatc accggaatgc cgtgacggcc catgatagat acgccgttag
     6061 ttgagaaggt ccacttatca acaaccggcg ctttgccaaa cagcccttcg taggcattca
     6121 ccagtgcttt aacggtgaag tgatcttctt ccactttcca ggtcgggaag tagcattcgg
     6181 ttgggtaaac caggccagtc caggacggac ggtcgtagtt gtacatagaa acaaccgcgt
     6241 tagctttctg tactgcaggc agggcgcgga tttcgtccag cgcgccttcc caggtttcgc
     6301 cccaggtcag acggcggtca atagagacgg cgcagctatc tgctacagcg caacggcttg
     6361 gggatgtgaa gaagatttca gaaacggtga gggtgccttt gccgaggaat tcgtcataac
     6421 ccagacgttg ggagagttct tgtaattcgc caagaatcgg acccattttg aaaatggcgt
     6481 tgtcaccgcg ttctggcgca gaaccgtggc agctaacacc ctgaacatca atacgaattt
     6541 ccatacgacc gcgctgacca cggtatatct ggcagtcggt tggttcggta ctgaccacaa
     6601 attccgggcg aatgccggat tgttcaataa tgtactgcca gcacagaccg tcgcagtctt
     6661 cttcctgcac agtaccggta accagcaggg tatattcatc ttccagaccg aggtctttaa
     6721 tgattttacc ggcataaacc atagatgcca tgccgccttc ctggtcggaa gtaccgcgac
     6781 caccgattag ctcatcagtt tccatgcctt cgtacggatc gaagtcccag tttttgatgt
     6841 tgccaatgcc gacggtatcg atatgagcgt ccattgccac cagacgcggg ccgtggccga
     6901 tataaccgag aacgttgccc atcgggtcga tttcaacttt atcgaagccg actttttcca
     6961 tctcttcttt aatacgatgt actacgcgtt tttcgtcgca gctttcactg ggaatagcaa
     7021 ccatgtcgcg caggaagcga gtcatgtccg cctggtaatc ttttgctttt tcaagaatca
     7081 gtttgaatgg aatattctta gccattattt ttctccagat tttttactcc ccgttttgca
     7141 gggagtagtt ccaatagggt gattaaggtg ctacagcgtg tttgccttcc cagacaactt
     7201 cgcggtagtg cttcacgtcg gtgtcgcctt cagtactgat aaccagcact acggcatctt
     7261 tgttcagcgc cagtttttcc atcaggcttt gacgttgcgg gtgataatga accgctgcga
     7321 gaacgcccaa accgacagcg ccggattcac cggagatgat gcgcgggtcg ttgccgtacg
     7381 gattacccag cacgcgcata cctaatgcgg caacgctgtc ctggcaggag atgaattggg
     7441 tggcgcagtt acgtaggatt tcccagccca gcgggttagg ttcgccacag gccaggcccg
     7501 ccatgatggt ggccatatca ccgccaacgt tgacgatgtc gcctttgacg ccggagcgat
     7561 aaatacagtc agctttgtca ggttcaacaa taatgctgtg cagattttgc gggctgtaga
     7621 cgtcgaccag ataacccagc acaccaccgg ccattgctcc gacaccggct tgcagcagaa
     7681 cgtgcgtcgg ggttacgccc atttcacgca tttgctcgac ggcttcatct gccagggttg
     7741 cgtagccttg catgatccag gttgggattt tggtgtaacc ttcccatgcc gtgtcctgta
     7801 ccacttccca gccgtgctgc tgcgcgtgtt gcatggtcag gcgaacggta tcgtcatagt
     7861 tcatatccgt gacgatgcac tcggcaccga ggttcagaat ggcgtcaacg cgttcctgag
     7921 cagaaccttt cggcatgtaa atcaccgcat tctgtccgag ttgctgtgct gcccacgcca
     7981 caccgcgccc gtggttgccg tcggtggtgg tcgcgaaagt cattttttcg ccgatggcat
     8041 ttttcaggtg ctcaaatgac agcgtttcga tatcaagatg atatttttca cacaataatt
     8101 gagcgatggc gtacgcaccg ccaagcattt tgaaggcgtt cagaccgaat cgttttgatt
     8161 cgtctttgac gagaattttc ttcacaccaa aaaggtttgc gagatcgtcc agcgcacaaa
     8221 gcggtgttgg gcgataacca gctattttct ggtggaactg gcgcgccagt ttggcctggc
     8281 tttgcgaaaa gagcggtgat gtttcgccgt tgaaaaattt gttatcggcg atatcaatct
     8341 tcaatgagaa aacggacata tcctatcctt ttggcctctg gaaatagagg gccgaccagc
     8401 tgatcggccc gaggggttat ttcacgcgtt cttgcgcttc tttcagcagt tgctcgagca
     8461 gtgcacctgg tttggcgtat ttacgg
//
LOCUS       DADMJE010000167         8456 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.170, whole genome shotgun sequence.
ACCESSION   DADMJE010000167 DADMJE010000000
VERSION     DADMJE010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8456)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8456)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8456
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.170"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..202
                     /gene="csgC"
                     /locus_tag="JN001_003495"
     CDS             <1..202
                     /gene="csgC"
                     /locus_tag="JN001_003495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706954.2"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HAY9054606.1"
                     /translation="SLREGGSGQSQTKQEKTLSLPANQPIALTKLSLNISPEDRVKIV
                     VTVSDGQALHLSQQWPPSSEKS"
     gene            323..634
                     /locus_tag="JN001_003496"
     CDS             323..634
                     /locus_tag="JN001_003496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 fimbrial protein"
                     /protein_id="HAY9054607.1"
                     /translation="MFRPFLNSLMLGSLFFPFIAIAGSTAQGGVIHFYGQIVEPACDV
                     STQSSPVEMNCPQNGSVPGKTYSSKALMSGNVKNAQVASVKVQYIDKQKKLAVMNIEY
                     N"
     gene            730..1263
                     /gene="ymdB"
                     /locus_tag="JN001_003497"
     CDS             730..1263
                     /gene="ymdB"
                     /locus_tag="JN001_003497"
                     /EC_number="3.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HAY9054608.1"
                     /translation="MKTRIHVVQGDITKLAVDVIVNAANPSLMGGGGVDGAIHRAAGP
                     ALLDACLKVRQQQGDCPTGHAVITLAGDLPAKAVVHTVGPVWRGGEQNEDQLLQDAYL
                     NSLRLVAANSYTSVAFPAISTGVYGYPRAAAAEIAVKTVSEFITRHALPEQVYFVCYD
                     EENAHLYERLLTQQGDE"
     gene            1205..2686
                     /locus_tag="JN001_003498"
     CDS             1205..2686
                     /locus_tag="JN001_003498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706957.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D family protein"
                     /protein_id="HAY9054609.1"
                     /translation="MMKKTPTSTKDSLPNKEMNDLPRLASAVLPLCSQHPGQCGLFPL
                     EKSLDAFAARYRLAEMAEHTLDVQYYIWQDDMSGRLLFSALLAAAKRGVRVRLLLDDN
                     NTPGLDDILRLLDSHPRIEVRLFNPFSFRLLRPLGYITDFSRLNRRMHNKSFTVDGVV
                     TLVGGRNIGDAYFGAGEEPLFSDLDVMAIGPVVEDVADDFARYWYCKSVSPLQQVLDV
                     PEGEMADRIELPASWHNDAMTHRYLRQMESSPFINHLVDGTLPLIWAKTRLLSDDPAK
                     GEGKAKRHSLLPQRLFDIMGSPSERIDIISSYFVPTRAGVAQLLRMVRKGVKIAILTN
                     SLAANDVAVVHAGYARWRKKLLRYGVELYELKPTREQSSTLHDRGITGNSGASLHAKT
                     FSIDGKTVFIGSFNFDPRSTLLNTEMGFVIESETLAQLIDKRFIQSQYDAAWQLRLDR
                     WGRINWVDRHAKKEIILKKEPATSFWKRVMVRLASILPVEWLL"
     gene            complement(2694..3851)
                     /gene="mdoC"
                     /locus_tag="JN001_003499"
     CDS             complement(2694..3851)
                     /gene="mdoC"
                     /locus_tag="JN001_003499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706958.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoC"
                     /protein_id="HAY9054610.1"
                     /translation="MNPVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEP
                     SLWLTLFNDFIHSFRMLVFFVISGYFSYMLFLRYPLKKWWKVRVERVGIPMLTAIPLL
                     TLPQFIMLQYVKGKAESWPGLSLYDKYNTLAWELISHLWFLLVLVVMTTLCVWIFKRI
                     RNNLENSDKTNKKFSMVKLSVIFLCLGIGYAVIRRTIFIVYPPILSNGMFNFIVMQTL
                     FYLPFFILGALAFIFPHLKALFTTPSRGCTLAAALAFVAYLLNQRYGSGDAWMYETES
                     VITMVLGLWMVNVVFSFGHRLLNFQSARVTYFVNASLFIYLVHHPLTLFFGAYITPHI
                     TSNWLGFLCGLIFVVGIAIILYEIHLRIPLLKFLFSGKPVVKRENDKAPAR"
     gene            4245..5780
                     /gene="mdoG"
                     /locus_tag="JN001_003500"
     CDS             4245..5780
                     /gene="mdoG"
                     /locus_tag="JN001_003500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis protein MdoG"
                     /protein_id="HAY9054611.1"
                     /translation="MMKMRWLSAAVMLTLYTSSSWAFSIDDVAKQAQSLAGKGYEAPK
                     SNLPSVFRDMKYADYQQIQFNHDKAYWNNLKTPFKLEFYHQGMYFDTPVKINEVTATA
                     VKRIKYSPDYFTFGDVQHDKDTVKDLGFAGFKVLYPINSKDKNDEIVSMLGASYFRVI
                     GAGQVYGLSARGLAIDTALPSGEEFPRFKEFWIERPKPTDKRLTIYALLDSPRATGAY
                     KFVVMPGRDTVVDVQSKIYLRDKVGKLGGAPLTSMFLFGPNQPSPANNYRPELHDSNG
                     LSIHAGNGEWIWRPLNNPKHLAVSSFSMENPQGFGLLQRGRDFSRFEDLDDRYDLRPS
                     AWVTPKGEWGKGSVELVEIPTNDETNDNIVAYWTPDQLPEPGKEMNFKYTITFSRDED
                     KLHAPDNAWVQQTRRSTGDVKQSNLIRQPDGTIAFVVDFTGAEMKKLPEDTPVTAQTS
                     IGDNGEIVESTVRYNPVTKGWRLVMRVKVKDAKKTTEMRAALVNADQTLSETWSYQLP
                     ANE"
     gene            5773..8316
                     /gene="mdoH"
                     /locus_tag="JN001_003501"
     CDS             5773..8316
                     /gene="mdoH"
                     /locus_tag="JN001_003501"
                     /EC_number="2.4.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucans biosynthesis glucosyltransferase MdoH"
                     /protein_id="HAY9054612.1"
                     /translation="MNKTTEYIDAMPIAASEKAALPKTDIRAVHQALDAEHRTWARED
                     DSPQGSVKARLEQAWPDSLADGQLIKDDEGRDQLKAMPEAKRSSMFPDPWRTNPVGRF
                     WDRLRGRDVTPRYLARLTKEEQESEQKWRTVGTIRRYILLILTLAQTVVATWYMKTIL
                     PYQGWALINPMDMVGQDLWVSFMQLLPYMLQTGILILFAVLFCWVSAGFWTALMGFLQ
                     LLIGRDKYSISASTVGDEPLNPEHRTALIMPICNEDVNRVFAGLRATWESVKATGNAK
                     HFDVYILSDSYNPDICVAEQKAWMELIAEVGGEGQIFYRRRRRRVKRKSGNIDDFCRR
                     WGSQYSYMVVLDADSVMTGDCLCGLVRLMEANPNAGIIQSSPKASGMDTLYARCQQFA
                     TRVYGPLFTAGLHFWQLGESHYWGHNAIIRVKPFIEHCALAPLPGEGSFAGSILSHDF
                     VEAALMRRAGWGVWIAYDLPGSYEELPPNLLDELKRDRRWCHGNLMNFRLFLVKGMHP
                     VHRAVFLTGVMSYLSAPLWFMFLALSTALQVVHALTEPQYFLQPRQLFPVWPQWRPEL
                     AIALFASTMVLLFLPKLLSILLIWCKGTKEYGGFWRVTLSLLLEVLFSVLLAPVRMLF
                     HTVFVVSAFLGWEVVWNSPQRDDDSTSWGEAFKRHGSQLLLGLVWAVGMAWLDLRFLF
                     WLAPIVFSLILSPFVSVISSRATVGLRTKHWKLFLIPEEYSPPQVLVDTDRFLEMNRQ
                     RSLDDGFMHAVFNPSFNALATAMATARHRASKVLEIARDRHVEQALNETPEKLNRDRR
                     LVLLSDPVTMARLHFRVWNSPERYSSWVSYYEGIKLNPLALRKPDAASQ"
BASE COUNT         2135 a         2005 c         2211 g         2105 t
ORIGIN      
        1 gtccctgcgc gaaggcggtt cagggcaaag tcagacgaag caagaaaaga ccctctcatt
       61 gcctgctaat caacctattg ctttgacgaa gttgagttta aatatttccc cggaagatcg
      121 ggtgaaaata gttgttactg tttctgatgg acaggcactt catttatcac aacaatggcc
      181 gccctcttca gaaaagtctt aatttgttga aatgtcgagc ataagatgaa tctggagaga
      241 atggtctgct gcgaatcagc caacctgaaa gtatggataa cacaaccctc aaggatgact
      301 aatcattgag gaaatagaat aaatgttcag acctttttta aactctctta tgctcggcag
      361 tttgtttttt ccttttattg ccatcgcagg aagcaccgcg caagggggcg tgatccattt
      421 ttatggccaa attgtggaac cggcatgtga cgtcagcacc cagtcatcac ccgtagaaat
      481 gaactgccca cagaatggtt ctgttccggg aaaaacctat tccagcaaag cgttaatgag
      541 cggcaatgtc aaaaacgcgc aagtagcctc agtaaaagtg cagtatattg ataaacagaa
      601 aaagctggct gtaatgaaca tcgaatataa ctaagtttct gaacaacgca cgttgctgag
      661 tagaaaaatg cgatttaacc aaaaagcctg ctgtacactt aagaaacaag aaggtgttaa
      721 ggaggcgtta tgaaaacgcg tattcatgtt gtgcagggtg atattaccaa actggccgtt
      781 gatgtgattg tgaatgcggc taatccgtca ttaatgggag gcggcggcgt cgatggggcc
      841 attcatcgcg cagcgggtcc ggccctgctg gatgcctgtt taaaagtcag gcaacagcag
      901 ggcgattgcc ctacggggca tgccgttatt acgcttgcag gcgatcttcc cgctaaagcc
      961 gtagtacaca ccgtcgggcc agtctggcgt ggtggtgaac aaaacgaaga ccagcttttg
     1021 caggatgcct atctcaatag tctgcgactg gtggcggcaa acagctatac gtcagtggca
     1081 tttcctgcaa tcagtactgg ggtttatggt taccctcgtg cggcagcggc tgaaatcgca
     1141 gtaaaaaccg tttcagaatt tattacccgt cacgctttac ccgaacaggt atactttgtc
     1201 tgttatgatg aagaaaacgc ccacctctac gaaagactcc ttacccaaca aggagatgaa
     1261 tgatttgccc cggctggcga gcgcggtgct gccactgtgt tcgcaacatc ccggtcagtg
     1321 tggtcttttc cctctggaga aaagtctgga tgcgtttgcc gcccggtatc gtctggccga
     1381 aatggcagag catacgctgg atgttcagta ttacatctgg caggacgata tgtcgggtcg
     1441 gttactgttt tccgccctgt tagccgcagc aaagcgtggc gttcgcgtcc gtttgttgct
     1501 ggacgacaac aatacgcccg gacttgacga tattttacgc ttgcttgaca gccatccccg
     1561 cattgaagtc cggcttttta atcctttctc gtttcgcttg ctgcgtccgc ttggttatat
     1621 caccgacttt tcccgtctca atcgccgtat gcacaataaa agtttcactg tcgatggcgt
     1681 ggttaccttg gtgggaggac gaaatattgg tgatgcctat tttggggcag gggaagagcc
     1741 acttttttcg gatttagatg ttatggcaat aggacccgtg gtagaggacg ttgccgatga
     1801 tttcgcccgc tactggtatt gcaaatcggt ttcaccctta cagcaggtgc tggatgtccc
     1861 ggaaggtgaa atggcggatc gcatcgagtt acccgcctcc tggcataacg atgccatgac
     1921 gcatcgttac ttacgccaaa tggaatccag tccgtttata aatcatctgg ttgatggaac
     1981 gttgccgctt atctgggcga aaacacgttt attaagtgat gatccggcga aaggggaggg
     2041 caaggcaaaa cggcattcac tgttaccgca gcgcctgttc gatatcatgg gctcacccag
     2101 tgaacgcatc gatattatct cttcctattt tgtaccgaca cgcgcaggtg tggcgcaact
     2161 cttacggatg gtgagaaaag gggtaaagat tgcgatccta accaattctc ttgccgctaa
     2221 cgatgttgct gtcgtccatg ccggatacgc gcgctggcgc aaaaaattgc tccgctatgg
     2281 cgtggaatta tatgaactca agccgacgcg tgaacaaagt agtacgttac acgatcgcgg
     2341 cataaccggt aattccggtg ccagcctgca tgctaaaacc tttagcatcg atggtaaaac
     2401 ggtgtttatc ggctctttca atttcgatcc acgttcgaca ttgctcaata ctgaaatggg
     2461 cttcgtgata gagagcgaaa cgctggcaca gttaattgat aaacgcttta tacagagcca
     2521 gtatgatgcg gcctggcagc tccgtctgga caggtgggga cggatcaact gggttgatcg
     2581 tcatgcaaag aaagagatta ttctcaaaaa agaacccgcc accagtttct ggaagcgggt
     2641 tatggtcaga ctggcgtcga tattgcccgt ggaatggtta ttgtaaatgt ggcttaacgg
     2701 gctggtgctt tatcgttctc acgcttaaca accggtttac cagaaaacaa aaacttcagt
     2761 aacgggatgc gtaaatgaat ttcatacaga attatcgcaa tccctactac gaatatcagg
     2821 ccacagagaa aaccaagcca gttggaggtg atgtgcggtg taatgtatgc gccgaaaaac
     2881 agcgttaacg ggtggtgaac cagatagata aatagcgatg cgttaacaaa gtaagtcacc
     2941 cgcgctgact ggaagttaag caaacggtgg ccaaaggaga agaccacatt caccatccac
     3001 agaccgagga ccatggtgat caccgactcg gtttcgtaca tccaggcatc gccactgcca
     3061 tagcgttggt tgagtaaata agcgacaaat gccaatgctg ctgcaagggt acagccacga
     3121 gacggcgtgg taaacaaggc tttaagatga gggaaaatga aagccagtgc accgaggata
     3181 aagaacggca aataaaatag cgtttgcatg acaataaaat tgaacatgcc attactcaga
     3241 atgggcggat acacaataaa aatcgttctt cttattaccg catagccgat gccgaggcat
     3301 aaaaaaatca ccgatagttt taccatcgag aattttttat tcgttttatc agaattttct
     3361 aaattatttc tgatgcgttt aaatatccat acgcacagcg tcgtcatgac tactaacacc
     3421 agtaaaaacc acaggtgtga tattaattcc caggccaacg tattatattt gtcatacaat
     3481 gacagcccag gccaactttc cgctttccct ttgacgtatt gcagcataat aaattgcggc
     3541 aatgtcagta aggggatggc tgttaacatc gggataccta cacgttcgac acgtactttc
     3601 caccattttt tcaagggata gcgtaaaaaa agcatgtagg aaaagtagcc ggatataacg
     3661 aaaaatacca gcatgcggaa cgagtggatg aagtcattaa aaagggtcag ccacaatgac
     3721 ggttcggcgc tattcacatg ccatgtatgg ctcgaataga ttaaagaaat atgaaaaggg
     3781 atccctaaca acatcagcca ggcgcggatg gagtcgagga aatattcacg ttgcgcgggt
     3841 actggattca tatatggtta actaatctcg gatttttcgt cttatccctg tcgggttatg
     3901 cctttaggct tgttgccata gcgacaccga cctgaccgcg ccagacgcag gcttcaaggt
     3961 ttttatgcat agcataatcg ctaccactaa ccagaatgga agcgtctgta agacggttga
     4021 taaataaaat tgctggcaaa ccctacacga agtcgatgct tctgtcttta ggagaagcac
     4081 ggaaagtgaa aacggttgca atcaggtgct taatccatga gccagcgtgc tgaacgatac
     4141 cgggattctg ttgtcggaat ggctggttat ccattaaaat agatcggatc gatataagca
     4201 cacaaagggg gaagtgctta ctaattatga aacataaact acaaatgatg aaaatgcgtt
     4261 ggttgagtgc tgcagtaatg ttaaccctgt atacatcttc aagctgggct ttcagtattg
     4321 atgatgtcgc aaagcaagct caatccttag ccgggaaagg ctatgaggcg cccaaaagca
     4381 acttgccctc cgttttccgc gatatgaaat acgcggacta tcagcagatc cagtttaatc
     4441 atgacaaagc gtactggaac aatctgaaga ccccattcaa actcgagttc taccatcagg
     4501 gtatgtactt cgataccccg gtcaaaataa atgaagtgac tgccaccgca gtcaaacgaa
     4561 tcaaatacag cccggattat ttcactttcg gcgatgttca gcatgacaaa gacacggtaa
     4621 aagaccttgg ttttgccggt tttaaagtgc tttacccgat caacagcaaa gataaaaacg
     4681 atgaaatcgt cagcatgctc ggggccagct atttccgcgt gattggtgca ggtcaggttt
     4741 atggcctttc tgcccgcggc ctggcaattg ataccgcctt gccatcgggt gaagaatttc
     4801 cacgcttcaa agagttctgg atcgagcgtc caaaaccgac tgataaacgt ttaaccattt
     4861 atgcattgct tgactcgccg cgcgcgacag gtgcttacaa attcgtggtt atgccagggc
     4921 gtgacacggt tgtggatgtg cagtcgaaaa tctatctgcg cgataaagtc ggcaaactgg
     4981 ggggtgcacc gttaaccagt atgttcctgt ttgggccgaa ccaaccgtcg cctgcaaata
     5041 actatcgtcc ggagttgcac gactctaacg gtctctctat ccatgccggt aatggcgaat
     5101 ggatctggcg tccgttgaat aacccgaaac atttagcggt tagcagcttc tcgatggaga
     5161 acccgcaagg cttcggtctg ttgcagcgcg gtcgtgattt ctcccgcttt gaagatctcg
     5221 atgatcgtta cgatcttcgt ccaagcgcat gggtgactcc gaaaggggag tggggtaaag
     5281 gcagcgttga gctggtggaa attccaacca acgatgaaac caacgataac atcgtcgctt
     5341 actggacgcc ggatcagctg ccggagccgg gtaaagagat gaactttaaa tacaccatca
     5401 ccttcagccg tgatgaagac aaactgcatg cgccagataa cgcatgggtg caacaaacgc
     5461 gtcgttcaac gggggatgtg aagcagtcga acctgattcg ccagcctgac ggtactatcg
     5521 cctttgtggt cgattttacc ggcgcagaga tgaaaaaact gccagaggat accccggtca
     5581 cagcgcaaac cagcattggt gataatggtg agatagttga aagcacggtg cgctataacc
     5641 cggttaccaa aggctggcgt ctggtgatgc gtgtgaaagt gaaagatgcc aagaaaacca
     5701 ctgaaatgcg tgctgcgctg gtgaatgccg atcagacgtt gagtgaaacc tggagctacc
     5761 agttacctgc caatgaataa gacaactgag tacattgacg caatgcccat cgccgcaagc
     5821 gagaaagcgg cattgccgaa gactgatatc cgcgccgtac atcaggcgct ggatgccgaa
     5881 caccgcacct gggcgcggga ggatgattcc ccgcaaggct cggtaaaggc gcgtctggaa
     5941 caagcctggc cagattcact tgctgatgga cagttaatta aagacgacga agggcgcgat
     6001 cagctgaagg cgatgccaga agcaaaacgc tcctcgatgt ttcccgaccc gtggcgtacc
     6061 aacccggtag gccgtttctg ggatcgcctg cgtggacgcg atgtcacgcc gcgctatctg
     6121 gctcgtttga ccaaagaaga gcaggagagc gagcaaaagt ggcgtaccgt cggtaccatc
     6181 cgccgttaca ttctgttgat cctgacgctc gcgcaaactg tcgtcgcgac ctggtatatg
     6241 aagaccattc ttccttatca gggttgggcg ctgattaatc ctatggatat ggttggtcag
     6301 gatttgtggg tttcctttat gcagcttctg ccttatatgc tgcaaaccgg tatcctgatc
     6361 ctctttgcgg tactgttctg ttgggtgtcc gccggattct ggacggcgtt aatgggcttc
     6421 ctgcaactgc ttattggtcg cgataaatac agtatatctg cgtcaacagt tggcgatgaa
     6481 ccattaaacc cggagcatcg cacggcgttg atcatgccta tctgtaacga agacgtgaac
     6541 cgtgtttttg ctggcctgcg tgcaacgtgg gaatcagtaa aagccaccgg gaatgccaaa
     6601 cactttgatg tctacattct tagtgacagt tataacccgg atatctgcgt cgcagagcaa
     6661 aaagcctgga tggagcttat cgctgaagtc ggtggcgaag gtcagatttt ctatcgccgc
     6721 cgccgtcgcc gcgtgaagcg taaaagcggt aatatcgatg acttctgccg tcgctggggc
     6781 agccagtaca gctacatggt ggtgctggat gctgactcgg taatgaccgg tgattgtttg
     6841 tgcgggctgg tgcgcctgat ggaagccaac ccgaacgccg ggatcattca gtcgtcgccg
     6901 aaagcgtccg gtatggatac gctgtatgcg cgctgtcagc agttcgcgac ccgcgtgtat
     6961 gggccactgt ttacagccgg tttgcacttc tggcaacttg gcgagtcgca ctactgggga
     7021 cataacgcga ttatccgcgt gaaaccgttt atcgagcact gcgcactggc tccgctgccg
     7081 ggcgaaggtt cctttgccgg ttcaatcctg tcacatgact ttgtagaagc ggcgttgatg
     7141 cgccgtgcag gttggggggt ctggattgct tacgatctcc cgggttctta tgaagaatta
     7201 ccgcctaact tgcttgatga gctaaaacgt gaccgccgct ggtgccacgg taacctgatg
     7261 aacttccgtc tgttcctggt gaagggtatg cacccggttc accgtgcggt gttcctgacg
     7321 ggcgtgatgt cttatctctc cgctccgctg tggtttatgt tcctcgcgct ctctactgca
     7381 ttgcaggtag tacatgcgtt gaccgaaccg caatacttcc tgcaaccacg gcagttgttc
     7441 ccggtgtggc cgcagtggcg tcctgagctg gcgattgcac tttttgcttc gactatggtg
     7501 ctgttgttcc tgccgaagtt attgagcatt ttgcttatct ggtgcaaagg aacgaaagaa
     7561 tacggcggct tctggcgcgt tacattatcg ttgctactgg aagtgctttt ttccgtgctg
     7621 ctggctccgg tacgcatgct gttccatacg gtcttcgttg tcagcgcgtt ccttggctgg
     7681 gaagtggtgt ggaattcacc gcagcgtgat gatgactcca cttcctgggg tgaagcgttc
     7741 aaacgccacg gctcacagct gctgttaggg ttagtgtggg ctgttgggat ggcgtggctg
     7801 gatctgcgtt tcctgttctg gctggcaccg attgtcttct cgttgatcct gtcaccgttt
     7861 gtttcggtga tttccagccg tgccaccgtt ggtctgcgaa ccaaacactg gaaactgttc
     7921 ctgatcccgg aagagtattc accgccgcag gtgctggttg ataccgatcg cttccttgag
     7981 atgaatcgtc aacgctccct tgatgatggt tttatgcacg cggtgtttaa cccgtcattt
     8041 aacgctctgg caaccgcaat ggcgaccgcg cgtcaccgcg ccagtaaggt gctggaaatc
     8101 gcccgtgacc gccacgttga acaggcgctt aacgagacgc cagagaagct gaatcgcgat
     8161 cgtcgcctgg tgctgctaag cgatccggtg acgatggccc gtctgcattt ccgtgtctgg
     8221 aattccccgg agagatattc ttcatgggtg agttattacg aagggataaa gctcaatcca
     8281 ctggcattgc gtaaaccgga tgcggcttcg caataaaaac gtagttgcct gatgcgctac
     8341 gcttatcagg cctacatcgt tcctgcaatt tattgatttt gcaagatttt gtaggttggg
     8401 taaggcgttc acgccgcatc cggcaaaaac aacgagccaa taaaaatacc ggcgtt
//
LOCUS       DADMJE010000168         8312 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.171, whole genome shotgun sequence.
ACCESSION   DADMJE010000168 DADMJE010000000
VERSION     DADMJE010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8312)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8312)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8312
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.171"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(95..1765)
                     /locus_tag="JN001_003502"
     CDS             complement(95..1765)
                     /locus_tag="JN001_003502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HscC"
                     /protein_id="HAY9054613.1"
                     /translation="MDNAELTIGIDLGTTNSLIAVWKDGAAQLIPNKFGEYLTPSIIS
                     MDENNHILVGKPAVSRRTSHPDKTAALFKRAMGSNTNWRLGSDTFNAPELSSLVLRSL
                     KEDAEEFLQRPIKDVVISVPAYFSDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYGL
                     HTQQNTRSLVFDLGGGTFDVTVLEYATPVIEIHASAGDSFLGGEDFTHMLVDEVLKRA
                     EVARTTLNESELAALYACVEAAKCSNQSPLHIRWQYQEETRECEFYENELEDLWLPLL
                     NRLRVPIEQALRDARLKPSQIDSLVLVGGASQMPLVQRIAVRLFGKLPYQSYDPSTIV
                     ALGAAIQAACRLRSEDIEEVILTDICPYSLGVEVNRQGVSGIFSPIIERNTTVPVSRV
                     ETYSTMHPEQDSITVNVYQGENHKVKNNILVESFDVPLKKTGAYQSIDIRFSYDINGL
                     LEVDVLLEDGSVKSRVINHSPVTLSTQQIEESRTRLSALKIYPRDMLINRTFKAKLEE
                     LWARALGDEREEIGRVITDFDAALQSNDMARVDEVRRRASDYLAIEIP"
     gene            complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JN001_003503"
     CDS             complement(1849..2784)
                     /gene="rihA"
                     /locus_tag="JN001_003503"
                     /EC_number="3.2.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-specific ribonucleoside hydrolase
                     RihA"
                     /protein_id="HAY9054614.1"
                     /translation="MALPILLDCDPGHDDAIAIVLALASPELDVKAITSSAGNQTPEK
                     TLRNVLRMLTLLNRTDIPVAGGAVKPLMRELIIADNVHGESGLDGPALPEPTFAPQNC
                     TAVELMAKTLRESAEPVTIVSTGPQTNVALLLNSHPELHSKIARIVIMGGAMGLGNWT
                     PAAEFNIYVDPEAAEIVFQSGIPVVMAGLDVTHKAQIHIEDTERFRAIGNPVSTIVAE
                     LLDFFLEYHKDEKWGFVGAPLHDPCTIAWLLKPELFTTVERWVGVETQGKYTQGMTVV
                     DYYYLTDNKPNATVMVDVDRQGFVDLLADRLKFYA"
     gene            complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JN001_003504"
     CDS             complement(2902..3627)
                     /gene="gltL"
                     /locus_tag="JN001_003504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020457015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter ATP binding
                     protein GltL"
                     /protein_id="HAY9054615.1"
                     /translation="MITLKNVSKWYGHFQVLTDCSTEVKKGEVVVVCGPSGSGKSTLI
                     KTVNGLEPVQQGEITVDGIVVNDKKTDLAKLRSRVGMVFQHFELFPHLSIIENLTLAQ
                     VKVLKRDKAPAREKALKLLERVGLSAHANKFPAQLSGGQQQRVAIARALCMDPIAMLF
                     DEPTSALDPEMINEVLDVMVELANEGMTMMVVTHEMGFARKVANRVIFMDEGKIVEDS
                     PKDAFFDDPKSDRAKDFLAKILH"
     gene            complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JN001_003505"
     CDS             complement(3627..4301)
                     /gene="gltK"
                     /locus_tag="JN001_003505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltK"
                     /protein_id="HAY9054616.1"
                     /translation="MYEFDWSSIVPSLPYLLDGLVITLKITVTAVVIGILWGTMLAVM
                     RLSSFAPVAWFAKAYVNIFRSIPLVMVLLWFYLIVPGFLQNVLGLSPKNDIRLISAMV
                     AFSMFEAAYYSEIIRAGIQSISRGQSSAALALGMTHWQSMKLIILPQAFRAMVPLLLT
                     QGIVLFQDTSLVYVLSLADFFRTASTIGERDGTQVEMILFAGFVYFVISLSASLLVSY
                     LKRRTA"
     gene            complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JN001_003506"
     CDS             complement(4301..5041)
                     /gene="gltJ"
                     /locus_tag="JN001_003506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter permease
                     GltJ"
                     /protein_id="HAY9054617.1"
                     /translation="MSIDWNWGIFLQQAPFGNTTYLGWIWSGFQVTIALSICAWIIAF
                     LVGSFFGILRTVPNRFLSGLGTLYVELFRNVPLIVQFFTWYLVIPELLPEKIGMWFKA
                     ELDPNIQFFLSSMLCLGLFTAARVCEQVRAAIQSLPRGQKNAALAMGLTLPQAYRYVL
                     LPNAYRVIVPPMTSEMMNLVKNSAIASTIGLVDMAAQAGKLLDYSAHAWESFTAITLA
                     YVLINAIIMLVMTLVERKVRLPGNMGGK"
     gene            complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JN001_003507"
     CDS             complement(5211..6119)
                     /gene="gltI"
                     /locus_tag="JN001_003507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate/aspartate ABC transporter
                     substrate-binding protein GltI"
                     /protein_id="HAY9054618.1"
                     /translation="MQLRKPATAILALALSAGLAQADDAAPAAGSTLDKIAKNGVIVV
                     GHRESSVPFSYYDNQQKVVGYSQDYSNAIVEAVKKKLNKPDLQVKLIPITSQNRIPLL
                     QNGTFDFECGSTTNNVERQKQAAFSDTIFVVGTRLLTKKGGDIKDFADLKDKAVVVTS
                     GTTSEVLLNKLNEEQKMNMRIISAKDHGDSFRTLESGRAVAFMMDDALLAGERAKAKK
                     PDNWDIVGKPQSQEAYGCMLRKDDPQFKKLMDDTIAQVQTSGEAEKWFDKWFKNPIPP
                     KNLNMNFELSDEMKALFKEPNDKALN"
     gene            6574..>8312
                     /locus_tag="JN001_003508"
     CDS             6574..>8312
                     /locus_tag="JN001_003508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HAY9054619.1"
                     /translation="MSASSVKPLNVQLPAITLILFALCIGIFCYLAQWMSYEEVDQSA
                     LIHLGANVAPLTLSGEPWRLLSSIFLHSSVSHLLMNMFAFLVVGGVAEQILGKWRLLI
                     TWLFSGVFGGLISACYALRDSDQIVISVGASGAIMGIAGAAIATQLASGAGTYHKNQR
                     RVFSLLGMVALTLLYGARQTGIDNACHIGGLIAGGALGWLSARLSGQNRLVTEGGIIV
                     AGSLLLTGAIWLAQQQMDESVLQVRQSLREAFYPQEIEQERRQKKQQLAEERNALRET
                     LSAPVSREQASGDLLAEIADIHDMAISRDGNMLYAAIENTNSIVVFDLGQKKILHTFT
                     APIAKEKSVKHCGGCKDQGVRSLALSPDEKLIYATSFEANALSVINVATGEIIQSITT
                     GAHPDSLILSRDGTKAWVMNRTSNSVSAIDLVTYQHVADIPLEKYDGAGTSGKPGAWV
                     MALSPDERTLLVPGAGRGNIVRINTITHQKEDFPAGDARGTISAMRFRPENGEVIFAD
                     SQGISRISVGDQQASIMTQWCSRSVYSVEGISPDGQYLALVSYGLQGYVILLNINAGQ
                     IIGVYPASYVNHLR"
BASE COUNT         2074 a         2053 c         2078 g         2107 t
ORIGIN      
        1 atgctctcgg caaaatcgcg atgttgttta gttgacgatg tgttttttgc gccgatgccg
       61 gatgcagcgt ttacgccgca tccggcagcc gtgtttatgg gatctcaatg gctaaataat
      121 cgctcgcccg ccgccgaact tcatccacgc gggccatgtc gtttgactgt agcgccgcat
      181 caaaatcggt gatcacccgg ccaatctctt ctcgctcgtc acccagcgct cgcgcccaca
      241 actcttccag tttggcttta aaggtgcgat tgatgagcat atcgcgcgga taaattttca
      301 atgcggataa ccgcgtccga ctctcttcaa tctgctgcgt gctcaatgtt accgggctgt
      361 ggttaatcac tctggactta acgctgccgt cttccagaag cacgtcaact tcaagcaacc
      421 cgttgatatc ataactaaag cgaatatcaa tcgactgata agccccggtt ttcttcaacg
      481 gcacatcgaa ggattcaacc agaatgttat ttttaacttt gtggttttct ccctgataga
      541 cgttaaccgt aattgaatcc tgctccgggt gcatggtcga gtaagtttct acacgcgaca
      601 ccggtactgt ggtgtttcgt tcaataatcg gcgagaaaat gccggaaacg ccctggcggt
      661 taacttcaac gcccaacgag taagggcaaa tatcagtgag gattacctct tcaatatctt
      721 cactgcgtaa gcggcaggcg gcctggattg ctgcgcccag cgcgacaatg gtgctcggat
      781 cgtaactttg atacggtaat ttgccaaaca gacgcacggc gattcgctgc accagcggca
      841 tttgtgacgc gccgccaacc agcaccagac tgtcgatttg actcggcttc agacgcgcat
      901 cgcgcaacgc ctgttcaatc ggcactcgca agcgattgag cagcggcaac cacaaatctt
      961 ccagttcgtt ctcgtaaaat tcgcattccc gcgtttcttc ctgatactgc cagcgaatgt
     1021 gcaatggcga ttgattgcta cattttgccg cttccacaca ggcgtacaag gctgccagtt
     1081 cactctcgtt aagcgtggtc ctggcaactt ccgcgcgttt taaaacctca tcgaccagca
     1141 tatgggtaaa atcttcgcca ccgaggaagc tatcgccagc ggaggcgtga atttcaatca
     1201 ccggcgtggc gtactcaagc accgtaacgt caaacgtgcc gccaccgaga tcaaaaacca
     1261 gcgagcgggt attttgttgc gtatgcaggc catatgccat cgcagctgct gtgggttcat
     1321 taattaagcg taccgcattt aacccggcta actccgcagc taaacgggta tgcttgcgtt
     1381 gttcatcgct gaaataagcc ggaacggaga tcaccacatc tttaatcgga cgttgcagaa
     1441 attcttcggc atcttctttt aatgagcgta ataccaaaga ggacagttct ggcgcgttaa
     1501 atgtgtcgct gcctaaccgc cagttggtat tactgcccat tgcgcgttta aataacgctg
     1561 ccgttttatc cggatgcgaa gtacgccgtg atacagccgg ttttccgact aaaatatgat
     1621 tattttcatc catgctaatt atggatggtg ttaaatattc accgaactta tttggaatta
     1681 attgcgcggc accgtctttc cagacggcaa ttaaactatt ggtagtgccg agatcgatac
     1741 caatggtgag ttctgcatta tccattgcat ttatatcttg aaagaaaaag agataaacag
     1801 attaagacca cccaggtaac gcgtggtgat cttaatcaat gacgtgtgtt aagcgtaaaa
     1861 tttcagacga tcagccagta aatcaacaaa gccctgacga tcaacatcga ccattacagt
     1921 ggcattcggt ttattgtcag tcagataata ataatcaaca accgtcatac cctgggtata
     1981 tttcccctgt gtttccacgc caacccagcg ctcaacagtg gtaaacaact cgggtttcaa
     2041 cagccaggcg atggtgcatg ggtcatgcag cggtgcaccg acaaagcccc atttttcgtc
     2101 tttatgatat tcgaggaaga aatccagcag ttcggcaaca atggttgaaa cagggttgcc
     2161 aatcgcgcgg aaacgctcgg tgtcttcaat gtggatttgc gctttatgag taacatccag
     2221 accggccatc accactggga tccctgactg gaagacaatt tctgccgctt ccgggtcaac
     2281 gtaaatatta aattcagccg caggcgtcca gttaccaagc cccattgcgc cgcccataat
     2341 cacgatacgg gcaattttgc tatgcagttc cggatggcta ttgagcagca aggcaacgtt
     2401 agtttgcggt ccggtagaca caatcgtgac aggttccgca ctttcgcgca gcgttttcgc
     2461 catcagctct accgccgtac agttttgcgg tgcgaacgtc ggttccggta atgccgggcc
     2521 atccagaccg ctttcgccgt gcacattgtc cgcgataatc aactcacgca ttaacggttt
     2581 taccgcgccg cctgctaccg gaatatcggt gcgattaagc aaggtcagca tacgcagaac
     2641 attgcgtaag gttttttctg gtgtctggtt tccggcggaa gacgtaattg ctttgacatc
     2701 aagctctggt gaggcgaggg cgagaactat tgcgatagcg tcgtcatgac ctgggtcgca
     2761 atctaacaga attggcagtg ccattgttgc tccttgttgt gtgcttcttt gcgacaaggg
     2821 taacgccagg atgtaacaga tacgaggggc gaaacgataa agcgtgagat ggcgcgcact
     2881 tgggtatgcg cgccagagtg attaatgcag gattttcgcg aggaagtctt tcgcgcggtc
     2941 cgatttcgga tcatcgaaga aagcgtcttt cggcgagtct tcgacaattt taccctcgtc
     3001 cataaagatc acccgattcg ccactttgcg ggcaaagccc atttcgtggg tcaccaccat
     3061 catggtcatt ccttcgttcg ccagttccac catcacgtcc agcacttcgt tgatcatctc
     3121 cggatccagc gccgatgtcg gttcgtcgaa cagcatcgca ataggatcca tacacaacgc
     3181 gcgagcgatt gccacacgct gctgctgacc gccggaaagc tgcgccggaa atttattggc
     3241 atgtgcggaa agtcccacgc gctccagcaa tttcaatgct ttttcacgag cgggcgcttt
     3301 atcgcgttta agcactttca cctgcgccag agtcaggttt tcaataatcg acaaatgggg
     3361 gaacaactca aaatgctgga acaccatccc gacgcgggaa cgcagctttg ccagatcggt
     3421 tttcttgtca ttaaccacga taccatcgac ggtgatttca ccttgctgca ctggttcgag
     3481 gccgttgacg gttttaatca gcgttgattt gccggaacca gacgggccgc aaaccaccac
     3541 cacttcgcct tttttcactt cggttgagca gtcggtcagc acctgaaagt gaccatacca
     3601 ttttgaaaca tttttcaggg taatcattat gctgtccttc ttttcaagta gctgaccaac
     3661 aacgacgcgc taagactaat aacgaaataa acaaatccgg caaacaggat catctcaacc
     3721 tgcgtaccat cacgctcacc aatggttgag gcggtacgga agaaatcggc cagagataac
     3781 acatacacca gtgaggtatc ctggaacagt acgatgccct gagtgagcag aagcggcacc
     3841 atcgcgcgga acgcctgcgg cagaataatc agtttcatcg actgccagtg agtcattccc
     3901 aacgccagcg cggcgctcga ctgaccacga gaaatacttt gaataccagc acggataatc
     3961 tctgaatagt aggccgcttc aaacatcgaa aacgccacca tcgccgaaat taaacggata
     4021 tcattttttg gtgataatcc cagcacgttt tgcagaaaac ctggcacgat caggtaaaac
     4081 cacagcaaaa ccataactaa aggaatcgag cggaatatgt taacgtaggc tttggcaaac
     4141 cacgctacgg gcgcaaagct ggacaagcgc atcaccgcca gcatggtgcc ccacaaaata
     4201 ccaatcacga ctgccgtgac ggtgattttc agcgtgatca ccagcccgtc gagcagatat
     4261 ggcagggaag ggacaatgga actccagtca aactcgtaca ttatttgccc cccatgttgc
     4321 caggcaggcg aactttacgt tcaaccagcg tcattaccag catgataatc gcgttaatca
     4381 acacatacgc cagcgtaata gcggtaaacg actcccaggc gtgggctgag taatcaagca
     4441 atttacccgc ctgcgccgcc atatccacca gaccaatagt cgaggcgatg gcggagtttt
     4501 tcaccaggtt catcatctcg gaagtcatcg gcgggacgat aacgcgataa gcattaggca
     4561 gcagtacgta tcgataagcc tgcggtagcg tcaggcccat cgccagcgcg gcattttttt
     4621 gcccacgcgg caacgactga atggcggcgc gtacctgttc gcaaacacgg gcggcggtaa
     4681 acagccccag gcagagcatg gatgaaagga aaaactgaat attgggatcc agctcggcct
     4741 taaaccacat gccgattttc tccggcaaca gctccgggat caccagatac caggtaaaga
     4801 attgcacaat caacggcacg ttgcggaaca gttcgacata caacgtaccc agaccggaga
     4861 gaaaacggtt tggaacggta cgtaaaatgc cgaaaaatga accgacgagg aaagcgataa
     4921 tccaggcgca gatcgacaaa gcgatcgtca cctgaaaacc actccagatc caaccaagat
     4981 aggtggtgtt gccgaacggg gcttgttgta aaaaaatacc ccagttccag tctatagaca
     5041 taaatctact ccagaaaaaa gagggtagca gcgttaactg ctaccctcga agattgttac
     5101 ccagcgtatt gcggttttca ggcccgatgg ggaacgacca tcaggcgtat agtctgtccg
     5161 tgctacgtaa caatcgagag ggctggaatt tccgcccctg gttcttgtaa ttagttcagt
     5221 gctttgtcat tcggttcttt gaacagtgct ttcatttcgt ctgacagttc gaaattcatg
     5281 ttcaggtttt tcggcggaat tggatttttg aaccatttat caaaccattt ttccgcttca
     5341 ccggaagtct gcacctgagc gatagtgtca tccatcagct ttttgaactg cggatcatct
     5401 ttacgcaaca tgcaaccgta ggcttcctga gactgcggct tgccgacgat atcccagttg
     5461 tctggtttct tcgctttcgc acgttcaccg gccagcaggg catcatccat cataaaggca
     5521 acggcacgac cgctttccag ggtgcggaaa gagtcaccgt gatctttggc gctgatgatg
     5581 cgcatattca ttttttgctc ttcattcagt ttgttgagca aaacttcaga ggtagtgccg
     5641 gaagtgacga ctacggcttt gtctttcagg tcggcaaaat ctttgatatc gccgcccttt
     5701 ttggtcagca ggcgcgtacc gaccacgaaa atagtatcag agaaagccgc ctgtttttgg
     5761 cgttcgacgt tgttggtggt agaaccacat tcaaaatcga aagtgccgtt ttgcagcagt
     5821 ggaatacggt tttgtgaggt aatcggaatc agttttacct gcaagtccgg tttgttgagt
     5881 ttctttttca ctgcttcaac aatggcgttg gagtaatcct gcgagtaacc caccactttt
     5941 tgctgattgt cgtaataaga gaaaggtact gaagattcac ggtgaccgac gacaatcaca
     6001 ccgtttttgg cgattttgtc cagcgtactg cctgctgccg gggcggcgtc atctgcctgt
     6061 gccagtcctg cggaaagcgc cagggcgagg attgctgtgg caggtttacg taattgcata
     6121 tccaactcct ttatcttctg cgttaagaac gcatggatac ccgttgtgag tgtttgtgtt
     6181 gttatcgtct gcaactttat tgtgcagtgt tgtgcctgtt aggtaacatt tagtttggct
     6241 aaatgtaaag atattgctgt tttattgttt gtttttgcga gatgcgccgc accattccga
     6301 agcaaaattc ttaaaccgca cctttttggt gctaccgctg atttgtggtg gtgcaacctg
     6361 gttgcgtcgc ggctgatttc atcgcttaca cagtaaataa agcaacttac atgccaaaaa
     6421 atacttaggg gcaaattaat tacgattgta attttaggct gaaaaagtca tatttcggac
     6481 agaattatct tttcggcatg ggacgtttgc cgggatgata actgcacacg ggaaaaatgc
     6541 tttttacctg tcttttcaag gaagaaacac cttatgtctg catcttcggt taagccgtta
     6601 aatgttcaat tacccgcaat aacccttatc ctttttgcac tctgtattgg gatattttgt
     6661 tatctcgcac aatggatgag ttatgaagag gtcgatcaat ccgcacttat ccatctcggc
     6721 gcaaacgttg cgcctcttac tttgtcgggt gaaccctggc gcttattgag cagtatcttt
     6781 ctgcacagta gtgtttctca tctgctgatg aatatgtttg cattcctggt cgtgggaggc
     6841 gtggcggaac agattctggg gaaatggcga ctcctgatta cctggttatt ctccggcgtc
     6901 tttggtgggc tcatcagcgc ctgttatgcg ttacgcgata gtgatcagat agtcatcagc
     6961 gttggggcat ccggggcaat tatgggaata gctggcgctg cgatagcaac acagcttgct
     7021 tcaggtgcgg gcacatacca taaaaaccag cggcgagtat tttctctgtt gggtatggtg
     7081 gcgctgacac tgttgtatgg tgcccggcaa acaggaatag ataatgcttg tcacattggc
     7141 ggcctgattg cgggtggcgc gttggggtgg ctgagcgcgc gtttatctgg gcaaaaccga
     7201 ctcgttacgg aaggcgggat tattgttgcg ggcagtcttc ttctgaccgg ggctatctgg
     7261 cttgcgcagc agcagatgga tgagtcagtt ttacaagtca ggcaaagcct gcgtgaagcg
     7321 ttttatccac aggagattga acaagagcga cggcaaaaaa agcagcagtt agcggaggaa
     7381 cgcaacgccc tcagggaaac attatccgct ccggtaagtc gtgaacaggc cagtggtgat
     7441 ttgctcgctg agattgccga tatccatgat atggcgatca gtcgggatgg taatatgttg
     7501 tatgccgcaa ttgaaaacac gaacagcatt gttgttttcg acctcggaca aaagaaaatc
     7561 ctgcatacct ttacagcgcc catagcgaaa gaaaagtcag tcaaacattg tggtggctgt
     7621 aaagatcagg gcgtcagatc gctggcatta agcccggatg aaaagttgat ttatgcgact
     7681 tcatttgaag cgaatgcgtt atcggtcatt aacgtggcga caggggagat tattcagtcg
     7741 attaccaccg gtgcacatcc tgacagcctt atcctctcgc gtgatggcac aaaagcctgg
     7801 gtgatgaatc gcaccagtaa tagtgtgtca gcgattgatc tggtgactta tcagcatgtg
     7861 gcggatatcc cgctggagaa atacgacggg gcggggacga gcggtaaacc aggcgcctgg
     7921 gttatggcac tttccccgga tgaaagaaca ttactggttc cgggagcagg cagaggtaac
     7981 atcgtgcgga tcaataccat cacgcatcag aaagaagact ttcccgcagg tgatgcgcgt
     8041 ggaacgatat cggcgatgcg ttttcgacct gaaaacggcg aggttatttt tgcagatagt
     8101 caggggattt cacgtataag cgtaggggat caacaagcca gcattatgac gcaatggtgt
     8161 agcaggagcg tttattccgt tgagggtatt agcccggacg gtcaatattt agcgttggtg
     8221 tcatatggcc tgcaaggtta tgtcatcctg ctcaatatta atgccgggca gattattggc
     8281 gtttatcctg ccagctacgt taatcacctt cg
//
LOCUS       DADMJE010000169         8193 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.172, whole genome shotgun sequence.
ACCESSION   DADMJE010000169 DADMJE010000000
VERSION     DADMJE010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8193
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.172"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..815)
                     /locus_tag="JN001_003509"
     CDS             complement(<1..815)
                     /locus_tag="JN001_003509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY9054620.1"
                     /translation="MKPAHNPSFFRSFCGLGCISRLSVEEQNITDYHRIWDNWAKEGA
                     ATEDRTQAVRLLKICLAFQEPALNLSLLRLRSLPYLPPHIQELNISSNELRSLPELPP
                     SLTVLKASDNRLSRLPALPPHLVALDVSLNRVLTCLPSLPSSLQSLSALLNSLETLPD
                     LPPALQKLSVGNNQLTALPELPCELQELSAFDNRLQELPPLPQNLRLLNVGENQLHRL
                     PELPQRLQSLYIPNNQLNTLPDSIMNLHIYADVNIYNNPLSTRTLQALQRLTSS"
     gene            907..993
                     /locus_tag="JN001_003510"
                     /pseudo
     CDS             907..993
                     /locus_tag="JN001_003510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015869530.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1003..1083)
                     /locus_tag="JN001_003511"
                     /pseudo
     CDS             complement(1003..1083)
                     /locus_tag="JN001_003511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416850.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
     gene            1294..1383
                     /locus_tag="JN001_003512"
                     /pseudo
     CDS             1294..1383
                     /locus_tag="JN001_003512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311139.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1175 family protein"
     gene            1407..5921
                     /locus_tag="JN001_003513"
                     /pseudo
     CDS             1407..5921
                     /locus_tag="JN001_003513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000536590.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-2-macroglobulin family protein"
     gene            5922..7571
                     /locus_tag="JN001_003514"
     CDS             5922..7571
                     /locus_tag="JN001_003514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2300 domain-containing protein"
                     /protein_id="HAY9054621.1"
                     /translation="MNWRRIVWLLALVTQPTLAEETPLQLALRGAQHDQLYQLSSSGV
                     TTVSALPDSLTTPLGSLWKLYVYAWLEDTHQPEQPYQCRGNSPEEVYCCQAGESITRD
                     TALVRSCGLYFAPQRLHIGADVWGQYWQQRQAPAWLASLTTLKPETSVTVKSLLDSLA
                     TLPAQNKAQEVLLDVVLDEAKIGVASMLGSRVRVKTWSWFADDKQEIRQGGFAGWLTD
                     GTPLWVTGSGTSKTVLTRYATVLNRVLPVPTQVASGQCVEVELFARYPLKKITAEKST
                     TAVKPGVLNGRYRVTFTNGNHITFVSHGETTLLSEKGKLKLQSHLDREEYVARVLDRE
                     AKSTPPEAAKAMTVAIHTFLQQNANREGDCLTIPDSSATQRVSASPATTGARTMTAWT
                     QDLIYAGDPVHYHGSRATEGTLSWRQATAQAGQGERYDQILAFAYPDNSLSRWGAPRS
                     TCQLLPKAKAWLAKKMPQWRRILQGETGYNEPDVFAVCRLVSGFPYTDRQQKRLFIRN
                     FFTLQDRLDLTHEYLHLAFDGYPTGLDENYIETLTRQLLMD"
     gene            7576..>8193
                     /locus_tag="JN001_003515"
     CDS             7576..>8193
                     /locus_tag="JN001_003515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054622.1"
                     /translation="MRKIFLPLLLVALSPVAHSEGVQEVEIDAPLSGWHPAEGEDASF
                     SQSINYPASSVNMADDQNISAQIRGKIKNYAAAGKIQQGRLVVNGASMPQRVESDGSF
                     ARPYIFTEGSNSVQVISPDGQSRQKMQFYSTPGTGTIRARLRLVLSWDTDNTDLDLHV
                     VTPDGEHAWYGNTVLKNSGALDMDVTTGYGPEIFAMPAPVHGRYQV"
BASE COUNT         2002 a         1968 c         2300 g         1923 t
ORIGIN      
        1 gaagaggtta atctttgcag ggcttgcaga gtgcgagtcg acaatggatt gttataaata
       61 ttaacatctg cataaatgtg cagattcatg atactgtctg gcaatgtgtt cagctgattg
      121 ttagggatat atagtgattg cagacgttgt ggaagttcgg gcagtctgtg tagttggttt
      181 tccccaacgt ttaaaagcct cagattttga ggaaggggcg gtagctcttg taatctgtta
      241 tcaaaagcac ttagttcctg tagttcacat ggtaattctg gtaaggcagt aagctggttg
      301 ttgccaacag aaagtttttg tagagccggg ggaagatcag gtagcgtctc caggctattg
      361 agaagggctg agagtgactg caaggaagat ggaagagaag gtaaacatgt taaaactctg
      421 ttaagtgaaa catcaagagc gaccaggtga ggcggaagag ccgggagcct gctcagtctg
      481 ttatcgctgg ctttaagtac agttaaggac ggagggagtt ctggcagaga gcgtagctca
      541 ttgctagaga tgttaagttc ttgtatgtgc gggggcaggt atgggagaga gcgtaatctg
      601 agtaaactta aattgagggc tggctcttga aaagccagac atattttcag taatcgaact
      661 gcctgtgttc ggtcttctgt tgcagcacct tccttggccc agttatccca gatgcggtga
      721 taatccgtga tattttgctc ttctacggat aaacgggata tacatcctaa accacaaaag
      781 gagcggaaaa aagaaggatt gtgggcaggt ttcatttatt attgatcctc attgtttata
      841 tattaatatg ttcgtgcaaa tggagtgagg attctttaaa aaaacgctcc tgtaaatagt
      901 taagaacagg aagaactgtt ggggatgtgg ctggccgaaa atgaaggggt gaagttctgg
      961 ctcaatgtgc tgactgaact gaaaaaacgc ggttggtcgc cctacctttt catcaagcca
     1021 gtagtctgcc caccactgca tcatttctct gcgcttatcg agatactgag catggttgta
     1081 aattcaacta acccagtgcg ttgacaaaaa attagcgcaa gaagacaaaa aatcaccttg
     1141 cgctaatgct ctgtatcagg tcactaatac cagctaagta gttgattcat agtgactgta
     1201 tatgttgtgc tttgtcgcat tttgtagtct attatttaat ctgtaacaac gataatacaa
     1261 tgaattttaa ttggtttttg tgattttgtc cttcttctga catggaagga cacccgatgg
     1321 atacccaacg attccaatcc caatttcatt ggcatttatc gtttaaattt tctggcgcga
     1381 tagcagcgtg cttgtctctg tctcttgtgg gaacagggct tgctaatgct gatgattcgc
     1441 ttccttccag taactatgcg ccgcccgccg ggggaacatt ctttttgctt gctgacagca
     1501 gttttagcag cagtgaagag gcgaaagtgc gactggaagc gccggggcgt gattatcggc
     1561 gctatcagat ggaagagtac ggcggcgtgg acgttcgcct gtatcgtatt cctgacccga
     1621 tggcattttt gcgccagcag aaaaacctgc atcgcattgt ggtgcaaccg caatatctgg
     1681 gcgacgggct gaacaatacg ctgacctggc tgtgggataa ctggtacggc aaatctcgcc
     1741 gcgtaatgca gcgtactttc tcttctcagt cacggcagaa tgtgactcag gcattacccg
     1801 aattacatct cggcaatgcc attattaaac cttcccgtta tgtacagaac aaccagtttt
     1861 ccccgctgaa aaaatatccc ttggtggaac agttccgtta tccactatgg caggctaaac
     1921 cggtcgagcc gcagcaaggg gtaaaactgg aaggcgcatc cagcaatttc atctcgccgc
     1981 agccgggtaa catttatatt cctctcggcc aacaagagcc gggactgtac ctcgtcgagg
     2041 cgatggttgg tgggtatcgg gcgacgacgg tggtgtttgt ttccgatacc gtggctctta
     2101 gcaaagtgtc aggcaacgag cttctggtgt ggaccgcggg taaaaaacag ggtgaagcga
     2161 agcccggctc agagatcttg tggactgacg gtcttggcgt gatgacccgc ggtgtgaccg
     2221 atgacagcgg taccttgcag ttacaacata tatcgccaga acgttcatac attctgggta
     2281 aggatgctga aggcggcgtt tttgtctccg agaacttctt ctacgaaagc gaaatctaca
     2341 acacccgctt gtatattttt accgatcgcc cgctatatcg cgcaggcgat cgtgtcgatg
     2401 ttaaagtgat gggccgcgag ttccacgatc cgttgcattc atcccccatc gtcagcgccc
     2461 cggcgaagct ttcggtgctg gacgctaacg gcagtctgtt gcaaaccgtc gatgtcacgc
     2521 tggatgcgcg caatggcggg cagggaagtt tccgcctgcc agaaaatgcc gttgccggag
     2581 gttatgagtt acgtcttgct taccgcaatc aggtctatag cagcagtttt cgcgtggcaa
     2641 actacatcaa gccacatttc gagattggtt tagctctcga caaaaaagag ttcaaaactg
     2701 gcgaagcggt cagcggcaaa ctgcaactgc tctacccgga tggcgagccg gtaaaaaatg
     2761 cccgcgtgca gttaagtttg cgcgctcagc aattatcaat ggtcggtaac gatttgcgtt
     2821 atgccggacg tttccccgtg tcgctggaag gcagcgaaac ggtgtccgac gccagcggtc
     2881 atgtggcgtt aaatctcccc gccgccgata aaccgagccg ttatttgtta accgtctccg
     2941 ccagtgacgg cgcggcgtat cgtgtcacca ccaccaaaga gatcctcatt gaacgcggtc
     3001 tggcgcatta ctcattaagt actgccgcac aatacagtaa tagcggcgag tcggttgtgt
     3061 tccgttatgc cgcgctggaa tcttcaaaac aggttcctgt tacgtatgaa tggttgcgtc
     3121 tcgaagaccg cacgagccat agcggagagc taccgtcagg cggcaaatcc tttaccgtca
     3181 atttcgctaa acctggcaac tacaatctga cattacgcga taaagacggc ttaattctcg
     3241 ctgggttaag ttatgccgtc agcggtaagg gcagcacggc gcatacgggt acggtagata
     3301 tcgtggcgga taaaacgctg taccagccag gcgaaaccgc gaagatgctg attacctttc
     3361 cggagccaat tgatgaagca ttattgacgc tggaacgcga tcgcgtggaa cagcagtcgc
     3421 tgctttcgca tccggcaaac tggctaacgc tacaacgttt aaacgatacc cagtatgaag
     3481 cccgggttcc agtgagcaat tcctttgcgc ctaacatcac tttttcggtg ctgtataccc
     3541 gtaatggtca gtacagtttt cagaacgccg ggatcaaagt tgccgttcct cagcttgata
     3601 tccgggtgaa aacggacaaa acccattacc agccaggtga actggtcaat gtcgaattaa
     3661 cctcgtcgct gaaaggtaaa cctgtttctg cgcagctaac ggtaggcgtg gtcgatgaaa
     3721 tgatctacgc gctgcaacca gaaatcgcgc cgaatatcgg caaatttttc tatccgctgg
     3781 ggcgtaacaa tgtgcgtacc agctccagtc tgtcgtttat cagctacgac caggcgctct
     3841 ccagcgagcc ggttgcgcct ggcgcaacta accgcagcga gcggcgagta aaaatgcttg
     3901 aacgtccacg gcgtgaagag gtggataccg cggcatggat gccgtcactc acaaccgata
     3961 aacaaggcaa agcgtatttc acgttcctga tgcctgattc gttaacccgc tggcgtatca
     4021 ccgcgcgtgg gatgaacggc gacgggctgg tcgggcaggg gcgtgcttat ctgcgttcgg
     4081 aaaaaaatct ctacatgaag tggagtatgc caacggtgta tcgcgtgggc gacaaaccgg
     4141 cggcaggact gtttatcttc agtcagcagg ataacgaacc ggtggcgctg gtgactaaat
     4201 ttgcaggcgc tgagatgcgc cagacgctga cgctgcacaa aggggcgaat tatatttcgc
     4261 tggcgcagaa tattcagcaa tctggcttgt taagtgcaga actgcaacaa aatgggcaag
     4321 tgcaggacag cattagcaca aaactgtctt ttgtggacaa cagcaggccc gttgaacagc
     4381 agaaaaatgt catgctcggc ggtggcgaga acgcgctgat gttgcccgag caggcgagta
     4441 atatccggct acaaagtagt gaaacgccgc aggagatttt ccgcaacaat cttgatgcgt
     4501 tagtcgatga accgtggggt ggggtgatca acaccggtag ccgtctgatc ccgctcagtc
     4561 tcgcctggcg ttcgcttgcc gatcatcaaa gtgccgccgc taacgacatt cgtcagatga
     4621 ttcaggataa ccgtctgcgg ctgatgcaac tggcggggcc cggagcgcgc tttacctggt
     4681 ggggtgaaga tggcaatggt gacgccttcc ttacggcatg ggcatggtac gccgactggc
     4741 aggccagcta ggcgctcggc gtaacgcaac aaccggaata ctggcagcat atgctcgaca
     4801 gttatgccga gcaggcggat aacatgccgt tattgcatcg ggcgctggtg ctggcgtggg
     4861 cacaggagat gaatctgccg tgcaaaacgt tgttgaaagg gttggatgaa gctatcgccc
     4921 ggcgcggaac taaagatgaa gatttctctg aggaagacat ccgcgatatc aatgacagcc
     4981 tgatcctcga tacaccggaa tctccactgg cagatgcggt ggcaaacgtc ttaaccatga
     5041 cgttgctgaa aaaagcgcag ttgaagtcca cggtgatgcc acaggttcag caatatgcgt
     5101 gggataaagc ggcaaacagc aatcagccgc tggcgcacac ggttgtgctg ctcaatagcg
     5161 gtggtgacgc tacccagacg gccgctattt taagtggttt gaccgctgag caatccacta
     5221 ttgagcgcgc gctggccatg aactggctgg cgaaatatat ggcgacaatg cctccagttg
     5281 ttttgcctgc gcctgcgggc gcatgggcta aacataagtt aactggaggg ggcgaatact
     5341 ggcgttgggt tggtcagggc gtgccggaca ttctctcttt tggtgacgaa ttatcgccgc
     5401 aaaatgtgca ggtccgctgg cgtgagccgg caaaaatggc tcaacaaagt aacattccgg
     5461 tgaccgttga acgccagttg tatcggctta tccctggtga agaagagatg agctttattc
     5521 tgcaaccggt gaccagcaat gagattgaca gcgatgcgct gtatctcgat gacatcacgc
     5581 ttaccagcga gcaggatgca gttctgcgct acggtcaggt ggaagtaccg ctgccaccgg
     5641 gagccgacgt tgagcgcaca acatggggca tttcggtcaa taaacccaac gccgcgaaac
     5701 agcaggggca attgctggaa aaagcgcgaa atgaaatggg cgaactggcc tatatggtgc
     5761 cggtgaaaga actgacggga acggtcactt tccgccattt gctgcgcttc tcgcaaaaag
     5821 ggcaattcgt tctgcctcct gctcgttatg tgcgttccta tgcacctgca cagcaaagtg
     5881 ttgcggcagg gagtgaatgg accgggatgc aggtgaaata agtgaactgg cgcagaatcg
     5941 tctggctatt ggcgttggtt actcagccaa cgcttgcgga ggagacgccg ttacaactgg
     6001 cactgcgtgg tgcgcagcac gatcaactgt atcagctgtc gtcatcaggc gtgaccacag
     6061 tctcagcatt acctgactcg ctcaccacgc cgttagggag tttgtggaaa ctgtatgttt
     6121 acgcctggct ggaggatacc catcaaccgg agcagcccta ccagtgtcgc ggaaactccc
     6181 cggaagaggt ttattgttgt caggctgggg agagcataac gcgcgatacc gcgctggtac
     6241 gttcctgtgg gctctatttt gcgccgcagc ggttgcatat tggcgcagat gtgtgggggc
     6301 aatactggca acagcgtcag gcgcctgcgt ggttagcgtc tcttactacg ctgaagccag
     6361 aaacctcggt aacggttaaa tcgctgcttg attcattagc gacgttacct gcgcaaaaca
     6421 aagctcagga agtcttactg gatgtggtgc tggacgaggc gaaaatcggt gtcgcatcca
     6481 tgctcggtag tcgggtacgg gtgaaaacct ggagctggtt tgccgatgat aaacaggaaa
     6541 tccgtcaggg tggttttgcc ggctggttaa ccgatggtac accgctgtgg gttactggca
     6601 gtggcaccag caaaacggta ctaacccgtt atgcgacagt gcttaatcgg gttttgccag
     6661 tgccgacgca ggttgccagt gggcaatgtg tagaggtgga gctgtttgcc cgctatccgc
     6721 tgaagaaaat cacagcggaa aagagtacga cggcagtaaa acccggcgta cttaatgggc
     6781 gctatcgtgt gacgtttact aatggtaacc acattacgtt tgtcagccac ggtgagacga
     6841 ccttactgag cgaaaagggc aaactgaaat tgcagtcgca tctcgatcgt gaagagtacg
     6901 ttgccagagt tctggatcgc gaggcgaaaa gtacgccccc tgaggcagcg aaagccatga
     6961 ccgtggcgat tcacactttt ttacagcaaa acgccaatcg ggaaggcgat tgcctgacca
     7021 tccccgacag cagcgccacg cagcgtgttt ctgcttcgcc agcgaccacg ggggcgcgaa
     7081 cgatgaccgc ctggacgcag gatctcatct atgcaggcga tccggttcat tatcatggca
     7141 gtcgagctac cgaagggaca ctttcctggc ggcaagccac ggcccaggcg gggcagggag
     7201 agcgttacga ccagatactc gcgtttgctt atcccgacaa cagccttagc cgctggggag
     7261 cgccacgctc aacctgccag ttattaccca aagcgaaagc ctggctggcg aaaaaaatgc
     7321 cgcagtggcg gcgtatatta caaggcgaga cggggtacaa cgaaccagac gtgtttgcgg
     7381 tctgtcgttt agtctcaggt ttcccctata ccgatcggca gcagaaacgg ctgtttattc
     7441 gtaacttctt tacgcttcag gatcggctgg atttaaccca tgagtatctg cacctggcct
     7501 ttgatggtta tcccaccggg cttgatgaga actatatcga aacgctgacc cgacaattat
     7561 taatggacta atgctatgcg aaagattttt cttccgttgt tactggtggc actttcgcct
     7621 gtcgctcaca gtgaaggtgt gcaggaagtc gagattgacg caccgctctc tggctggcat
     7681 ccggcagagg gcgaagatgc cagtttttca caatcgatca attacccggc gtcgtccgtc
     7741 aacatggcag atgatcaaaa tatctcagcg cagatccgcg gcaaaataaa gaattatgct
     7801 gcggcgggta aaattcagca gggccggctg gtggtcaacg gtgccagtat gccgcagaga
     7861 gttgaatccg atggttcatt tgcacgccct tatattttca ctgaaggcag caacagcgtg
     7921 caggtcatca gcccggatgg gcaaagccga caaaaaatgc agttttactc aacgccgggt
     7981 acaggaacga ttcgtgcacg tttacggctg gttctctcgt gggatacgga caataccgat
     8041 ctcgatctcc atgttgtcac gcccgatggc gaacacgcct ggtacggtaa caccgtgctg
     8101 aaaaacagtg gtgcactgga tatggatgtc acgacggggt acggacccga gattttcgcc
     8161 atgccagcgc cagttcacgg acgctatcag gtg
//
LOCUS       DADMJE010000170         8154 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.173, whole genome shotgun sequence.
ACCESSION   DADMJE010000170 DADMJE010000000
VERSION     DADMJE010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8154)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8154)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8154
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.173"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(133..209)
                     /locus_tag="JN001_003516"
     tRNA            complement(133..209)
                     /locus_tag="JN001_003516"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(173..175),aa:Asp,seq:gtc)
     gene            complement(342..1073)
                     /gene="dnaQ"
                     /locus_tag="JN001_003517"
     CDS             complement(342..1073)
                     /gene="dnaQ"
                     /locus_tag="JN001_003517"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706156.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HAY9054623.1"
                     /translation="MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVVNRRLT
                     GNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPTFAEVADEFMDYIRGAELVIHNAAF
                     DIGFMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKRT
                     LHGALLDAQILAEVYLAMTGGQTSMAFAMEGETQQQQGEATIQRIVRQASKLRVVFAT
                     DEELAAHEARLDLVEKKGGSCLWRA"
     gene            1138..1605
                     /gene="rnhA"
                     /locus_tag="JN001_003518"
     CDS             1138..1605
                     /gene="rnhA"
                     /locus_tag="JN001_003518"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HAY9054624.1"
                     /translation="MLKQVEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYTRTTN
                     NRMELMAAIVALEALKEHCEVILSTDSQYVRQGITQWIHNWKKRGWKTADKKPVKNVD
                     LWQRLDAALGQHQIKWEWVKGHAGHPENERCDELARAAAMNPTLEDTGYQVEV"
     gene            complement(1602..2324)
                     /locus_tag="JN001_003519"
     CDS             complement(1602..2324)
                     /locus_tag="JN001_003519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308236.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY9054625.1"
                     /translation="MKPARVPQTVVAPDRWGDLPWGELYRKALERQLNPWFTKMYGFH
                     LLKIGNLSAEINCEACAVSHQVNVSAQGMPVQVQADPLHLPFADKSVDVCLLAHTLPW
                     CTDPHRLLRETDRVLIDDGWLVISGFNPISLMGLRKLVPVLRKTSPYNSRMFTLMRQL
                     DWLSLLNFEVLHASRFHVLPWNKHGGKLLNAHIPALGCLQLIVARKRTIPLTLNPMKQ
                     SKNKPRIRQAVGATRQCRKPQA"
     gene            2358..3113
                     /gene="gloB"
                     /locus_tag="JN001_003520"
     CDS             2358..3113
                     /gene="gloB"
                     /locus_tag="JN001_003520"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HAY9054626.1"
                     /translation="MNLNSIPAFDDNYIWVLNDEAGRCLIVDPGDAEPVLNAIAANNW
                     QPEAIFLTHHHHDHVGGVKELVEKFPQIVVYGPQETQDKGTTQVVKDGETAFVLGHEF
                     SVIATPGHTLGHICYFSKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTL
                     VCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLR
                     TEDIDLINVINEETLLQQPEERFAWLRSKKDRF"
     gene            3185..4543
                     /gene="mltD"
                     /locus_tag="JN001_003521"
     CDS             3185..4543
                     /gene="mltD"
                     /locus_tag="JN001_003521"
                     /EC_number="4.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein transglycosylase D"
                     /protein_id="HAY9054627.1"
                     /translation="MKAKAILLASVLLVGCQSTGNVQQHAQSLSAAGQGEAAKFTSQA
                     RWMDDGTSIAPDGDLWAFIGDELKMGIPENDRIREQKQKYLRNKSYLHDVTLRAEPYM
                     YWIAGQVKKRNMPMELVLLPIVESAFDPHATSGANAAGIWQIIPSTGRNYGLKQTRNY
                     DARRDVVASTTAALNMMQRLNKMFDGDWLLTVAAYNSGEGRVMKAIKTNKARGKSTDF
                     WSLPLPQETKQYVPKMLALSDILKNSKRYGVRLPTTDESRALARVHLSSPVEMAKVAD
                     MAGISVSKLKTFNAGVKGSTLGASGPQYVMVPKKHADQLRDSLASGEIAAVQSTLVAD
                     NTPLNSRVYTVRSGDTLSSIASRLGVSTKDLQQWNKLRGSKLKPGQSLTIGAGSSAQR
                     LANNSDSITYRVRKGDSLSSIAKRHGVNIKDVMRWNSDTANLQPGDKLTLFVKNNNMP
                     DS"
     gene            complement(4592..5215)
                     /locus_tag="JN001_003522"
     CDS             complement(4592..5215)
                     /locus_tag="JN001_003522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HAY9054628.1"
                     /translation="MSGLPQGRPTFGAAQNVSAVVAYDLSAHMLDVVAQAAEARQLKN
                     ITTRQGYAASLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSP
                     GHPVRDIWLQAVEALRDTSHVRNYASGAWLTLINEANLIVDNLITDKLPLEFSSWVVR
                     MRTPEALVDAIRIYQQSASTEVRTYFSLQTDGSFTSDIIMVEAHKAA"
     gene            complement(5219..6019)
                     /locus_tag="JN001_003523"
     CDS             complement(5219..6019)
                     /locus_tag="JN001_003523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HAY9054629.1"
                     /translation="MRKNTYAMRYVAGQPAERILPPGSFASIGQALPLGEPLSTEERI
                     RILVWNIYKQQRAEWLSVLKNYGKDAHLVLLQEAQTTPELVQFATANYLAADQVPAFV
                     LPQHPSGVMTLSAAHPVYCCPLREREPILRLAKSALVTVYPLPDTRLLMVVNIHAVNF
                     SLGVDVYSKQLLPIGDQIAHHSGPVIMAGDFNAWSRRRMNALYRFAREMSLRQVRFTD
                     DQRRRAFGRPLDFVFYRGLNVSEASVLVTRASDHNPLLVEFSPGKPDK"
     gene            6260..7174
                     /locus_tag="JN001_003524"
     CDS             6260..7174
                     /locus_tag="JN001_003524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054630.1"
                     /translation="MKATSEELAIFVSVVESGSFSRAAEQLGQANSAVSRAVKKLEMK
                     LGVSLLNRTTRQLSLTEEGERYFRRVQSILQEMAAAESEIMETRNTPRGLLRIDAATP
                     VVLHFLMPLIKPFRERYPEVTLSLVSSETIINLIERKVDVAIRAGTLTDSSLRAKPLF
                     NSYRKIIASPDYISRYGKPETIDDLKQHVCLGFTEPASLNTWPIACSDGQLHEVKYGL
                     SSNSGETLKQLCLSGNGIACLSDYMIDREIARGELVELMADKVLPVEMPFSAVYYSDR
                     AVSTRIRAFIDFLSEHVKTAPGGAVREA"
     gene            complement(7171..7938)
                     /gene="dkgB"
                     /locus_tag="JN001_003525"
     CDS             complement(7171..7938)
                     /gene="dkgB"
                     /locus_tag="JN001_003525"
                     /EC_number="1.1.1.346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,5-didehydrogluconate reductase DkgB"
                     /protein_id="HAY9054631.1"
                     /translation="MKDYVVISSVKTALELGYRAIDTAQIYDNEAAVGQAIAESGVPR
                     HELYITTKIWIENLSKDKLIPSLKESLQKLRTDYVDLTLIHWPSPNDEVSVEGVMQAL
                     LEAKKQGLTREIGISNFTIPLMEKAIAAVGAENIATNQIELSPYLQNRKVVAWAKQHG
                     IHITSYMTLAYGKALKDEVIARIAAKHNATPAQVILAWAMGEGYSVIPSSTKRKNLES
                     NLKAQNLQLDAEDKKAIAALDCNDRLVSPEGLAPEWD"
BASE COUNT         2185 a         1960 c         1978 g         2031 t
ORIGIN      
        1 gtctaccata tgtgattaac acatttacag cataacaaaa ccatagaccg aagaaatagc
       61 gggatttaaa tgcaaaaaaa ccgcaaaatt aaaaatcttg cggttctctg aactcatttt
      121 catgagtgaa tttggcggaa cggacgggac tcgaacccgc gaccccctgc gtgacaggca
      181 ggtattctaa ccgactgaac taccgctccg cgttgtgttc cgttgggaac gaggcgaata
      241 ttacggattg cctcaccctt cgtcaacggt ttttctcatc ttttgaatcg tttgctgcaa
      301 aaatcgccca agccgctatt tttagcgcct tttacaggta tttatgcccg ccagaggcag
      361 cttccgccct tcttctccac cagatcaaga cgggcttcat gagctgcaag ctcttcatct
      421 gtcgcaaaaa caacgcgtaa cttacttgcc tgacgtacaa tgcgctgaat tgttgcttca
      481 ccttgttgct gctgtgtctc tccttccatc gcaaaagcca tcgacgtttg accaccggtc
      541 atcgccagat aaacttccgc aaggatctgt gcatcgagta atgccccgtg tagcgttcgt
      601 ttactgttat ctatttcgta gcgggcacat aacgcatcga ggctgttgcg cttaccagga
      661 aacattttcc tcgccaccgc aaggctatcg gtgaccttac agaaggtatt ggtcttcgga
      721 atatcgcgct taagcaacga aaactcgtag tccataaagc cgatatcgaa cgctgcgtta
      781 tggatcacca actccgcgcc gcggatatag tccatgaact catcggctac ttcggcaaac
      841 gtgggcttat cgagcaaaaa ttcatcggca ataccatgta cgccaaaggc ttccggatcc
      901 accagccgat cgggtttgag ataaacatgg aagttattgc ccgtcaggcg acggttcacc
      961 acttcaacgg caccaatctc aatgatcttg tggccttcat agtgcgcacc aatctggttc
     1021 ataccggtgg tttcggtatc gagaacgatc tggcgtgtaa ttgcagtgct catagcggtc
     1081 atttatgtca gacttatcgt tttacagttc gattcaatta caggaagtct accagagatg
     1141 cttaaacagg tagaaatttt caccgatggt tcgtgtctgg gcaatccagg acctgggggt
     1201 tacggcgcta ttttacgcta tcgcggacgc gagaaaacct ttagcgcagg ctacacccgc
     1261 accaccaaca accgtatgga gttgatggcc gctattgtcg cgctggaggc gttaaaagaa
     1321 cattgcgaag tcattttgag taccgacagc cagtatgtcc gccagggtat cacccagtgg
     1381 atccataact ggaaaaaacg tggctggaaa accgcagaca aaaaaccagt aaaaaatgtc
     1441 gatctctggc aacgtcttga tgctgcccta gggcaacatc aaatcaaatg ggaatgggtt
     1501 aaaggccatg ccggacaccc ggaaaacgaa cgctgtgatg aactggctcg tgctgcggca
     1561 atgaatccca cactggaaga tacgggctac caagtcgaag tttaagcttg tggtttacga
     1621 cattgccggg tggctccaac cgcttggcga attcgtggct tgtttttact ctgtttcatc
     1681 gggtttagcg ttaaaggaat agtccgtttc cgggcaacaa taagttgtaa gcaaccaagc
     1741 gcaggaatat gcgcattcaa tagttttcct ccgtgtttgt tccacgggag aacgtggaaa
     1801 cggctggcgt gcagcacttc aaaattcaac aaagagagcc agtccagttg ccgcatcaga
     1861 gtaaacatcc ggctgttata gggcgaggtt tttcgcaata ccggcacaag tttgcgtaat
     1921 cccattaaac taatgggatt gaagccacta atcaccagcc agccatcatc aatcaatacc
     1981 cgatcggttt cacgcaataa acgatgcgga tcggtgcacc acggcaatgt atgtgccagt
     2041 agacaaacat caacggattt atcggcaaaa ggaagatgaa gtggatccgc ctgcacctgg
     2101 acgggcattc cttgcgcaga aacattcact tgatgagaaa ccgcgcacgc ttcgcaattg
     2161 atttctgcgc ttaaattgcc aatcttaagc agatgaaaac catacatttt agtgaaccac
     2221 gggttgagct ggcgctccag cgccttgcga taaagctctc cccagggcaa atcgccccag
     2281 cgatcaggag ccacgacagt ttgagggact cttgccggtt tcatcacaac cttccgtttc
     2341 acactaagag gtaatctatg aatcttaaca gtattcccgc ctttgatgac aattacatct
     2401 gggttttgaa tgatgaagca ggtcgctgcc tgattgtcga tcccggagac gcagagccag
     2461 tattaaacgc cattgccgcc aataactggc aaccggaggc catatttctc acccaccatc
     2521 atcacgatca cgttggcggc gtaaaagaac tggtggaaaa gtttccgcaa attgtggtgt
     2581 atggtccaca agagacacaa gataagggaa caacacaggt agtcaaagat ggcgaaactg
     2641 ccttcgtttt ggggcatgaa tttagtgtaa ttgccacacc gggtcacact ttaggacata
     2701 tctgttactt cagtaaacct tatctatttt gcggcgacac gctgttttct ggtgggtgtg
     2761 gtaggttgtt tgaagggaca gcatcacaaa tgtatcaatc acttaataag ttaagtgcgt
     2821 tacctgacga tacattggta tgttgtgctc atgaatatac gttatcaaat atgaagtttg
     2881 ctttgagtat tcttccgcac gatttgtcca taaatgatta ttatcgtaaa gttaaggagt
     2941 tacgggcaaa aaatcaaata acactacccg taattctgaa aaatgagcgg caaattaatg
     3001 tttttttaag aacggaagat attgatttaa ttaatgtaat taatgaagaa acattattgc
     3061 aacaacctga agagcgtttt gcatggttaa ggtcaaagaa agataggttc tgataaaact
     3121 ttcttgtcat cggctccgtt cgccgttatg atcggtcgtc ttttaagcaa ctattgacac
     3181 acacatgaag gcaaaagcga tattactcgc ctctgtcctg ctcgtgggtt gccagagtac
     3241 cggcaacgtt caacagcacg cacagagcct ttctgcagct ggtcaagggg aagcagcaaa
     3301 gtttacaagt caggcacgat ggatggacga tgggacgtct atcgcgccag atggtgactt
     3361 gtgggctttc attggcgacg agctaaagat gggaattccg gaaaatgacc ggattcgcga
     3421 acagaaacag aaatatttac gcaataagag ctatctccac gatgtaactt tacgggcaga
     3481 gccgtatatg tactggatag cagggcaagt taaaaaacgt aacatgccta tggaactggt
     3541 actactaccc atagtggaga gcgcttttga tcctcacgca acgtctggcg ccaatgccgc
     3601 aggcatctgg cagatcattc cgagcacggg gcgcaattat ggtttgaaac agacccgcaa
     3661 ttatgacgcg cgtcgcgatg ttgttgcttc aacaactgcc gcgctgaaca tgatgcagcg
     3721 tctgaacaag atgtttgacg gcgactggct tctgaccgta gcggcttata acagcggcga
     3781 aggtcgggtc atgaaggcaa ttaaaacgaa caaagcgcgt gggaaatcca cggacttctg
     3841 gtcgttaccg ttgccgcagg aaacgaagca gtacgtgcct aaaatgctgg cattgagtga
     3901 tattctcaaa aacagcaagc gttatggcgt acgtctgcca acgaccgatg aaagccgtgc
     3961 tctggcgcgt gtgcacctga gcagcccggt tgaaatggcg aaggttgcag atatggcggg
     4021 gatttccgtc agcaagctga agacattcaa cgctggcgta aaaggctcca cgctgggcgc
     4081 aagtggcccg cagtacgtga tggtgccaaa gaagcatgca gatcaactgc gtgattctct
     4141 cgcttcaggc gaaattgctg ctgtacagtc gacgctggtt gccgacaata cgccgcttaa
     4201 cagccgtgtt tacaccgtac gctctggcga cacgctttca agcatcgctt cacgtctcgg
     4261 cgtaagcacc aaagatttgc agcagtggaa caaactgcgc ggatctaagc tgaagccagg
     4321 ccaaagtttg acgattggtg caggcagtag cgcacagcgg ttggcaaaca acagcgatag
     4381 cattacgtat cgtgtgcgca aaggcgattc gctttcaagc attgctaaac gccacggcgt
     4441 gaacatcaaa gatgtgatgc gctggaacag tgacactgcg aatctgcaac caggcgataa
     4501 gctgacgttg tttgtgaaaa acaacaacat gccagattcc tgacaaacca gataataaaa
     4561 aaggcaccga ttcccccggt gcctttttta tttatgccgc tttatgcgct tctaccatga
     4621 tgatatcact ggtgaaagag ccatcagtct gcaaggaaaa atacgttctc acctctgtcg
     4681 atgcgctctg ttggtaaatg cgaatagcgt ctactaacgc ttctggcgta cgcattctca
     4741 cgacccatga agaaaattcc agcggtaact tatctgtaat taaattatca actataagat
     4801 tggcttcatt gattaacgtc aaccacgcac cgctggcgta gtttcgtacg tgagaggtat
     4861 cgcgtaatgc ttctaccgcc tgtaaccaga tgtcgcgcac tgggtgaccc ggagacatta
     4921 catccatcac aatcagccta ccgccaggtt tcaatatcct attcacttct cgcagtgctg
     4981 caccaacatc atgccagtga tgggcagaat aacggctgat aacaatatca aatgcgttat
     5041 cggcaaatgg cagacttgcg gcatatccct ggcgggtggt gatatttttc agttgccggg
     5101 cttcggcagc ttgtgccacg acatccagca tgtgggccga taagtcatac gccaccaccg
     5161 cgctcacgtt ttgcgcagcg ccaaacgttg gtctgccctg tggcagacct gacatacctt
     5221 atttatcagg cttgccggga ctgaattcaa cgagtagcgg attgtgatcg gaagcgcgcg
     5281 taaccagtac agaagcttca ctgacgttca gaccacggta gaaaacaaaa tcgagcggac
     5341 gaccaaacgc ccgacggcgc tgatcatcgg taaaacgcac ctggcgcagc gacatttccc
     5401 gcgcaaagcg atataacgcg ttcatccttc tacggctcca ggcattgaaa tctcccgcca
     5461 taatgaccgg gccgctgtgg tgagctatct gatcaccaat aggaagtaac tgcttactat
     5521 agacatccac gcccagactg aagttgacgg cgtgtatatt aaccaccatc aacaggcggg
     5581 tgtcaggtaa tggatagacc gtcaccagtg ccgacttcgc cagacgcaaa atgggttctc
     5641 gttcacgtaa cgggcagcaa tacactggat gtgccgccga aagggtcatt acgccagaag
     5701 gatgttgtgg cagcacgaaa gcgggtacct gatcggcggc aagatagtta gcggtcgcaa
     5761 actgtactaa ctctggcgtt gtctgcgctt cctgcaataa caccaggtgt gcatctttgc
     5821 cgtagttctt taataccgac aaccattcag cgcgttgctg tttgtatatg ttccacacca
     5881 ggatccgaat acgctcttcg gtacttaacg gttccccaag tggtaatgcc tggccgatgc
     5941 tcgcaaaaga ccccggcggt aagatccttt ccgcaggttg tccggcaaca tagcgcatgg
     6001 cataggtgtt ttttcgcact tttgactttg aaacctctat tacgtcaacc cttccgcact
     6061 cgggagggtt ctactattat agggatttta gctcactctt tcaacgagca attgtatatt
     6121 gttatgtaag caagtgctta caccggtcag aattttgctc attatggaga acattaaatc
     6181 gcatgacata tcacgcatcc tgatggttta atgacaaata aattcaaaat atctcttcta
     6241 ttttgcaaca ggagcaaaaa tgaaagccac gtcggaagaa ctcgccattt ttgtttcggt
     6301 cgtcgaaagc ggcagcttta gccgggcagc ggaacaatta gggcaagcaa actcagcggt
     6361 aagccgggcg gtgaaaaagc tggagatgaa acttggcgtt agcctgctta atcggaccac
     6421 gcgacaactt agcctgacgg aagaaggcga gcgttatttt cgtcgcgtac agtcaatttt
     6481 gcaggagatg gcagcggcag aatcagaaat tatggagacg cgtaatacac cgcgtggact
     6541 gttacggatc gatgccgcaa ctccagtggt gctgcacttt ctgatgccgt taattaagcc
     6601 tttccgtgaa cgctatccgg aagtcacttt gtcgctagtc tcctccgaaa cgattattaa
     6661 tttgatcgaa agaaaagtgg atgtcgcgat acgcgctggt acgttaacgg attccagctt
     6721 acgtgccaag ccgttattta acagttatcg aaaaattatc gcctcccccg attatatttc
     6781 ccgctacggg aagccagaaa cgatcgacga tttaaagcaa catgtttgcc tgggattcac
     6841 tgaacccgct tccctcaata cctggccgat agcctgtagt gatggacaat tacatgaggt
     6901 gaaatacggt ttgtcatcca atagtgggga aacactgaaa cagctttgcc tgagtggcaa
     6961 cgggattgcg tgtttgtccg actacatgat cgacagagaa atcgctcgcg gagaattggt
     7021 ggagttaatg gcagataaag tgttgccagt ggaaatgcca ttcagtgccg tctattacag
     7081 cgaccgtgcg gtaagtacgc gcatccgggc ttttatcgat ttccttagcg agcatgtaaa
     7141 aacagctccc ggaggagctg tcagagaggc ttaatcccat tcaggagcca gaccttccgg
     7201 gctaaccagg cggtcgttgc aatccagtgc ggcgatcgct tttttatctt cggcatcaag
     7261 ctgtaaattt tgtgccttaa gattactttc caggttttta cgtttagtag aagaaggaat
     7321 tactgagtaa ccttccccca tagcccacgc cagaatcact tgtgccggag tcgcattgtg
     7381 tttagctgcg atacgagcaa taacctcatc tttcagggcc ttaccatacg ccagcgtcat
     7441 ataggaagta atatggatgc cgtgctgttt agcccaggca accactttac ggttttgcag
     7501 ataaggagag agttcaatct ggttagtagc gatgttttca gcgccaacag cagcaatcgc
     7561 cttttccatc aatgggatcg tgaagttgga aataccgatc tcacgcgtca gcccttgttt
     7621 tttggcttcc agcagcgcct gcataacccc ttcaacagag acttcatcgt ttggtgacgg
     7681 ccagtggatt agcgtcagat caacataatc ggtacgcaat ttttgcaggc tctctttcag
     7741 acttgggatc aatttgtctt tgctgagatt ttcaatccag attttagtgg tgatgtagag
     7801 ttcatgacgt ggcacgccac tttctgcaat cgcctgacct actgcggctt cgttatcata
     7861 gatttgtgcg gtatcaattg cgcgataacc aagttcaagc gccgttttca cagatgaaat
     7921 aacaacgtag tctttcaacc taaaccaaat gcagggatag ccataatatg cctcttttaa
     7981 tgctattttc gttaactgag gtgattatgg gcttcagact gttgaggaaa aaagcgtaaa
     8041 atgcagagga tttttgcgat tctggcaata atagatatac agacgaaaaa aaacctcgag
     8101 cgttaactcg aggcttctta ataagtggcg gaacggacgg gactcgaacc cgcg
//
LOCUS       DADMJE010000171         8146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.174, whole genome shotgun sequence.
ACCESSION   DADMJE010000171 DADMJE010000000
VERSION     DADMJE010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.174"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            66..260
                     /locus_tag="JN001_003526"
     CDS             66..260
                     /locus_tag="JN001_003526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005009814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="melibiose carrier protein"
                     /protein_id="HAY9054632.1"
                     /translation="MQFIMIALPTLFFMVTLILYFRFYRLNGDTLRRIQIHLLDKYRK
                     VPPEPVHADIPVGAVSDVKA"
     gene            complement(399..1028)
                     /locus_tag="JN001_003527"
     CDS             complement(399..1028)
                     /locus_tag="JN001_003527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2238 domain-containing protein"
                     /protein_id="HAY9054633.1"
                     /translation="MTRTLKPLILNTGALALTLILIYTGISAHDKLTWLMEVTPVIIV
                     VPLLLATARRYPLTPLLYTLIFLHAIILMVGGQYTYAKVPVGFEVQEWLGLSRNPYDK
                     LGHFFQGLVPALVAREILVRGMYVRGRKMVAFLVCCVALAISAMYELIEWWAALAMGQ
                     GADDFLGTQGDQWDTQSDMFCALLGALTTVIFLARFHCRQLRRFGLITG"
     gene            complement(1151..2797)
                     /locus_tag="JN001_003528"
     CDS             complement(1151..2797)
                     /locus_tag="JN001_003528"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I fumarate hydratase"
                     /protein_id="HAY9054634.1"
                     /translation="MSNKPFIYQAPFPMGKDNTEYYLLTSDYVSVADFDGETILKVEP
                     EALTLLAQQAFHDASFMLRPAHQKQVAAILHDPEASENDKYVALQFLRNSEIAAKGVL
                     PTCQDTGIAIIVGKKGQRVWTGGGDEEALSKGVYNTYIEDNLRYSQNAALDMYKEVNT
                     GTNLPAQIDLYAVDGDEYKFLCVAKGGGSANKTYLYQETKALLTPGKLKNFLVEKMRT
                     LGTAACPPYHIAFVIGGTSAETNLKTVKLASAHYYDELPTEGNEHGQAFRDVQLEQEL
                     LEEAQKLGLGAQFGGKYFAHDIRVIRLPRHGASCPVGMGVSCSADRNIKAKINREGIW
                     IEKLEHNPGQYIPQELRQAGEGEAVKVDLNRPMKEILAQLSQYPVSTRLSLTGTIIVG
                     RDIAHAKLKELIDAGKELPQYIKDHPIYYAGPAKTPAGYPSGSLGPTTAGRMDSYVDL
                     LQSHGGSMIMLAKGNRSQQVTDTCHKHGGFYLGSIGGPAAVLAQQSIKHLECVAYPEL
                     GMEAIWKIEVEDFPAFILVDDKGNDFFQQIVNKQCANCTK"
     gene            complement(2875..4215)
                     /locus_tag="JN001_003529"
     CDS             complement(2875..4215)
                     /locus_tag="JN001_003529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic C4-dicarboxylate transporter"
                     /protein_id="HAY9054635.1"
                     /translation="MLFTIQLIIILICLFYGARKGGIALGLLGGIGLVILVFVFHLQP
                     GKPPVDVMLVIIAVVAASATLQASGGLDVMLQIAEKLLRRNPKYVSIVAPFVTCTLTI
                     LCGTGHVVYTILPIIYDVAIKNNIRPERPMAASSIGAQMGIIASPVSVAVVSLVAMLG
                     NVTFDGRHLEFLDLLAITIPSTLIGILAIGIFSWFRGKDLDKDEEFQKFISVPENREY
                     VYGDTATLLDKKLPKSNWLAMWIFLGAIAVVALLGADSDLRPSFGGKPLSMVLVIQMF
                     MLLTGALIIILTKTNPASISKNEVFRSGMIAIVAVYGIAWMAETMFGAHMSEIQGVLG
                     EMVKEYPWAYAIVLLLVSKFVNSQAAALAAIVPVALAIGVDPAYIVASAPACYGYYIL
                     PTYPSDLAAIQFDRSGTTHIGRFVINHSFILPGLIGVSVSCVFGWIFAAMYGFL"
     gene            complement(4786..5505)
                     /gene="dcuR"
                     /locus_tag="JN001_003530"
     CDS             complement(4786..5505)
                     /gene="dcuR"
                     /locus_tag="JN001_003530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DcuR"
                     /protein_id="HAY9054636.1"
                     /translation="MSNVLIIDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIF
                     NSDTPIDLILLDIYMQKENGLDLLPVLHNARCKSDVIVISSAADAATIKDSLHYGVVD
                     YLIKPFQASRFEEALTGWRQKKMALEKHQYYDQAELDQLIHGSSSNEQDPRRLPKGLT
                     PQTLRTLCQWIDAHQDYEFSTDELANEVNISRVSCRKYLIWLVNCHILFTSIHYGVTG
                     RPVYRYRIQAEHYSLLKQYCQ"
     gene            complement(5502..7133)
                     /gene="dcuS"
                     /locus_tag="JN001_003531"
     CDS             complement(5502..7133)
                     /gene="dcuS"
                     /locus_tag="JN001_003531"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system sensor histidine kinase
                     DcuS"
                     /protein_id="HAY9054637.1"
                     /translation="MRHSLPYRMLLKRPMKLSTTVILMVSAVQFSVLLVVHLIYFSQI
                     SDMTRDGLANKALAVARTLADSPEIRQGLQKKPQESGIQAIAEAVRKRNDLLFIVVTD
                     MQSLRYSHPEAQRIGQPFKGDDILKALNGKENVAINRGFLAQALRVFTPIYDENHKQI
                     GVVVSGLELSRVTQQINDSRWSIIWSVLFGMLVGLIGTCILVKVLKKILFGLEPYEIS
                     TLFEQRQAMLQSIKEGVVAVDDRGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQV
                     VDVSEVLRDGTPRRDEEITIKDRLLLINTVPVRSNGVIIGAISTFRDKTEVRKLMQRL
                     DGLVNYADALRERSHEFMNKLHVILGLLHLKSYKQLEDYSLKTANNYKEEIGSLLGKI
                     KSPVIAGFLISKINRATDLGHTLILNSESLLPDSGSEDQVATLITTLGNLIENALEAL
                     GPEPGGEISVTLHYRHGWLHCEVNDDGPGIAPDKIDHIFDKGVSTKGSERGVGLALVK
                     QQVENLGGSIAVESEPGIFTQFFVQIPWDGERSNR"
     gene            7314..7544
                     /gene="yjdI"
                     /locus_tag="JN001_003532"
     CDS             7314..7544
                     /gene="yjdI"
                     /locus_tag="JN001_003532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S mono-cluster protein YjdI"
                     /protein_id="HAY9054638.1"
                     /translation="MDQALLDEGYRCYTGEKIDVYFNTAICQHSGNCVRGNGKLFNLK
                     RKPWIMPDEVDVVTVVKVIDTCPSGALKYRHK"
     gene            7556..7828
                     /locus_tag="JN001_003533"
     CDS             7556..7828
                     /locus_tag="JN001_003533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HAY9054639.1"
                     /translation="MEIREGHNKFYINDEQGKQIAEIVFVPTGENLAIIEHTDVDESL
                     KGQGIGKQLVAKVVEKMRREKRKIIPLCPFAKHEFDKTREYDDIRS"
     gene            8055..>8146
                     /gene="ghoS"
                     /locus_tag="JN001_003534"
     CDS             8055..>8146
                     /gene="ghoS"
                     /locus_tag="JN001_003534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY9054640.1"
                     /translation="MEGKNKFNTYVVSFDYPSSYSSVFLRLRSL"
BASE COUNT         2021 a         1969 c         2084 g         2072 t
ORIGIN      
        1 cggttgtgtt agggatgatt ggctatgtac cgaatgttga acagtctacg caagccctat
       61 taggtatgca gtttattatg attgctctac caactctgtt tttcatggta acgctgattc
      121 tctacttccg tttctatcgc ctcaatggtg acacgctgcg caggatccag atccatctgc
      181 tggataaata tcgcaaagta ccgcccgagc ctgttcatgc tgatattccg gtcggtgcag
      241 tgagtgatgt gaaagcctga cgtggacaat agctaacgaa aatggcctga tgcgatatgt
      301 ttatcaggcc acgtcttaat gtaatgcttt ggatttgcaa attttgtaga ccggataagg
      361 aattcacgct gcatccggca tcaacaaagc gcacgttgtt atccggttat caagccaaag
      421 cgccgtagct ggcggcaatg aaagcgagcg aggaatatca ccgtcgttaa tgcgccaagc
      481 agcgcgcaga acatatcgga ttgcgtgtcc cactggtcgc cctgggtgcc gagaaaatca
      541 tccgctccct gacccattgc cagcgccgcc caccactcga ttaattcata cattgcgctt
      601 atcgccagcg ccacgcagca gactaggaac gccaccattt tacgtccgcg cacgtacatc
      661 ccgcgaacga gaatttctcg tgccaccagt gcaggcacca gcccctggaa aaagtgcccc
      721 agcttgtcat acggattacg gctcaacccc agccattcct gcacctcaaa accaacgggg
      781 actttcgcgt aggtgtattg tccgccgacc atcaggatga tggcgtgaag gaaaatgagc
      841 gtatagagca gcggcgttaa cggataacgt ctggcggtgg caagcagtag cggcacgaca
      901 ataatcaccg gtgtcacttc catcagccag gtgagtttgt catgggccga aatgccggta
      961 taaatcagga ttaatgttag cgccagtgcg ccggtgttaa gaattaacgg cttgagtgtg
     1021 cgggtcatgg tgagttcgca aatcagggaa aatactgact attcaccagc aagcgtgaaa
     1081 ttacaatcgc aaaagaggtg gcccaggggg atcacctggc agcatgctgc caggcgctgg
     1141 gccgaagagg ttacttagtg cagttcgcgc actgtttgtt gacgatttgc tggaagaagt
     1201 cgttaccttt gtcatcgacc aagataaacg ccgggaaatc ttctacttcg attttccaga
     1261 tagcttccat acccagctcc ggataagcga cgcattccag atgcttgatg ctctgctgcg
     1321 ccagtaccgc cgccggaccg ccgatgctac cgaggtagaa gccgccgtgt ttatgacacg
     1381 tgtcggtaac ctgctgactg cggttacctt tcgccagcat gatcatgctg ccgccgtggg
     1441 attgcagcag atccacgtag gagtccatac ggcctgcggt ggttgggcca agtgaacctg
     1501 atggataacc ggcaggggtt ttcgccggac ccgcgtagta gatcgggtga tctttgatgt
     1561 actgcggaag ttctttaccg gcgtcaatca gctctttcag cttggcgtgt gcaatatctc
     1621 ggcccacgat aatggtgccg gtgagcgaca aacgagtgga taccgggtat tgcgaaagct
     1681 gggcgaggat ctctttcatc gggcggttaa ggtcaacttt caccgcttcg ccttcaccgg
     1741 cctggcgcag ttcttgtgga atgtactggc ctgggttgtg ttccagtttt tcgatccaga
     1801 taccttcgcg gttgattttc gctttaatgt tacggtcagc ggagcaggag acgcccatgc
     1861 cgaccgggca ggatgcgccg tgacgtggca gacggataac gcgaatgtcg tgcgcgaagt
     1921 atttaccgcc aaactgtgcg ccaagaccga gtttctgggc ctcttccagc agttcctgtt
     1981 ccagctggac atcgcggaac gcctgaccat gttcgttccc ttccgtcggc agttcatcgt
     2041 aatagtgagc gcttgctaac ttgacggttt tcaggttggt ttccgcagac gtaccgccaa
     2101 tcacaaacgc gatatggtac ggcgggcagg ctgcagtacc gagggtacgc attttctcga
     2161 cgaggaagtt tttcagtttg ccgggagtca gcagggcttt ggtttcctgg tagagatacg
     2221 ttttgttggc agagccgccg cctttcgcaa cgcaaaggaa tttgtactca tcgccatcta
     2281 ccgcgtacag gtcgatttgc gcaggcaggt tagtgccggt gttgacctct ttgtacatgt
     2341 ccagcgccgc attctgtgaa tagcgcaggt tatcttcgat ataggtgtta tagacgcctt
     2401 tcgacagcgc ttcttcatca ccgccgccgg tccacacgcg ctggcctttt ttaccgacga
     2461 tgatcgcgat gccggtatcc tggcaggtcg gcagcacgcc tttggcggcg atttcggaat
     2521 ttcttaagaa ttgcagcgcc acgtacttgt cgttttcgct ggcttctgga tcgtgaagaa
     2581 tagccgcaac ctgtttctgg tgtgccgggc ggagcataaa agaagcgtcg tgaaaggctt
     2641 gctgcgccag cagggtcagg gcttctggtt ccactttcag gatggtttcg ccgtcgaagt
     2701 cggcaacgct aacgtaatcg gaagtgagta gatagtattc ggtattgtct ttccccatcg
     2761 ggaaaggtgc ctggtagata aagggtttgt ttgacatagc ttccagcctg taactctgta
     2821 tttgttattc gaaaatggcg tgccgcgtag tcacgggcgg cacgcaaagt gcatttataa
     2881 gaacccgtac atcgcggcga agatccagcc gaagacgcac gatacgctca caccaatcaa
     2941 ccccggcaga ataaagctgt ggttgatgac gaagcgaccg atgtgggtgg tgccggaacg
     3001 gtcaaactga atcgctgcca gatcgctcgg ataagtcggc aggatgtaat aaccgtagca
     3061 agccggtgct gaagccacga tgtatgccgg atcaacgccg atcgccaacg cgaccggaac
     3121 aatcgccgcc agcgccgcag cctgagagtt tacaaacttg gaaaccagca gcagaacaat
     3181 ggcataggcc cacggatact ctttcaccat ttcacccagt acgccctgaa tttcagacat
     3241 atgcgcaccg aacatggttt ctgccatcca tgcgataccg tacaccgcca cgatggcgat
     3301 cataccggaa cggaagactt cgttttttga gatagacgcg ggattggttt tggtcaggat
     3361 aataatcagc gccccggtca gcagcataaa catctgaata accagtacca tcgacagcgg
     3421 tttgccgccg aaggatggac gcaggtccga atcagcacca agaagggcga ctacagcgat
     3481 tgccccgagg aaaatccaca ttgccagcca gttgcttttc ggcagttttt tatccagcag
     3541 cgtcgcggta tcaccgtaaa catactcacg gttttccggt acggagatga atttctggaa
     3601 ctcttcgtct ttatccagat ctttaccacg gaaccagctg aagataccga tcgccaggat
     3661 accgattaac gtcgatggaa tggtgattgc cagcaggtcg aggaactcaa gatggcgacc
     3721 atcaaaggtg acattaccca gcatcgcaac cagagacacg accgcaaccg acaccggact
     3781 ggcgataatc cccatctgtg caccgataga acttgccgcc atcggacgtt ccggacggat
     3841 gttgttctta atggcgacgt cgtagatgat cggcagaatg gtgtaaacca catgacccgt
     3901 accgcaaaga atggtcagcg tacaggtcac aaacggcgcg acaattgaga catatttcgg
     3961 gttgcggcgc agcaacttct cggcaatttg cagcatgaca tcaagaccgc ccgaagcttg
     4021 caaggtcgcc gatgccgcca ccaccgcaat gataaccagc atgacatcaa ccggtggttt
     4081 acctggctga aggtggaaga cgaagaccag aatgaccaga ccgataccgc ctaataaacc
     4141 cagcgcgata ccaccctttc tggcaccata aaacagacat atcagtatta tgataagttg
     4201 gatagtaaat aacatgtgtg aaccctcgcg ataatcctat ttaaattttt gctgaataga
     4261 tcacagtcac gttctgtttt gtatgaactg ttttcagagc ctgactaaat atccgtttgg
     4321 tcgttaccgg ctttagcaaa tacctcacag taaatattgg ctgattaaag cagcggcaaa
     4381 tttatgcact gtgataagcg gctttttcag agagaaaaac tctctggcga tgggtttata
     4441 gtttgtactg cgcagatgtt aatgttttgt ttgctgttat cttattgata tttatcggtc
     4501 tattttttgt tctcagggca gatatcatta ggtttaaaga ttaatcttat ctacccattt
     4561 gtgggtgaaa atacacataa tgcgggtgac ataatagtta attaactttt gttagcgttt
     4621 tgaaattaaa aacaccgttc acctgaagag atattaattt ttagcgatga tggagggata
     4681 attatatttg atctggcaca agttttactg atgaaggatg taacttgtgc caggggtatt
     4741 ttgcattacg gtaataatta ttacttacag ataaccagcg atccgttatt ggcaatattg
     4801 tttcagtagt gagtagtgtt ctgcctgaat acggtaacgg taaaccggac gccccgtgac
     4861 gccataatgg atactggtga acaagatgtg gcagttgacc agccagatga ggtatttacg
     4921 gcaggaaaca cgcgagatgt taacctcgtt agccagctcg tcggttgaaa actcatagtc
     4981 ctgatgcgcg tcaatccact ggcacagcgt gcgtaacgtc tgcggcgtta agccttttgg
     5041 caagcgacga ggatcctgtt cgttggagct gctgccgtgg attagctgat caagctcggc
     5101 ctggtcataa tactgatgtt tttccagcgc cattttcttt tgccgccagc cggtgagcgc
     5161 ctcttcaaag cgggaagcct ggaagggttt gatcaggtaa tccacgacac cgtaatgcag
     5221 cgaatcttta atggttgccg catcggctgc ggaggagatg acaatcacat cacttttgca
     5281 acgcgcgtta tgcaggacag gcagtaaatc gagcccgttc tctttttgca tatagatatc
     5341 gagcaatatc aggtcgatag gcgtatcgct attgaagata atctctttgg ctttctccag
     5401 cgtcgaggct gttccacagc attgaaagcc tgggatttgt gctacgtatc ggcgattcag
     5461 ctccgcgacc attgcgtcgt catcgataat taatacattg ctcatctgtt tgacctctcc
     5521 ccgtcccagg gtatctggac aaaaaattgt gtgaaaatcc cgggttccga ttccacggcg
     5581 atgctgccgc cgagattttc tacctgttgt ttgacaagtg ctaaaccgac gcctcgctcg
     5641 cttccttttg tcgagacacc tttgtcaaaa atgtgatcga ttttgtcggg tgcgatcccc
     5701 ggtccatcat cgttaacttc gcagtgcagc cagccgtgac ggtagtgcaa tgttacgcta
     5761 atttcgccac cgggttccgg ccctaatgct tccagcgcgt tttctatcag atttcccaat
     5821 gtggtaatca gcgtcgcgac ctggtcctca ctgccgctgt ctggcagcag gctttcactg
     5881 tttaaaatca gcgtatggcc taaatcggtc gcgcggttaa tcttgctgat taaaaaacca
     5941 gcgataaccg gagatttgat cttacccagc agagagccaa tctcttcctt atagttattg
     6001 gctgttttga gactgtaatc ttccaactgc ttataactct tcagatgcaa taatccgaga
     6061 atcacatgca atttattcat aaattcgtgg gatcgttcac gaagtgcatc agcatagttg
     6121 accagaccgt cgagtcgctg catcagttta cgaacttcag ttttgtccct gaaggttgaa
     6181 atggcaccga tgataacgcc attactgcgc accggaacgg tgttgatcag taatagccgg
     6241 tctttaatcg taatctcttc gtcgcggcgc ggcgtaccgt cgcgtaacac ttccgagaca
     6301 tctaccacct gtgaccatga gtggcttagc gtcgacagtt tctcatcgtc ctgcgactta
     6361 cggtaattca gcaattcttg tgcggcatcg ttgatcagcg tgacctcgcc gcgatcgtcc
     6421 acggcaacga cgccttcttt gatagactgc aacatggcct ggcgctgctc aaacagcgtg
     6481 gagatttcgt agggttccag gccgaaaagg atttttttca gtaccttaac cagaatgcag
     6541 gtgccaatca gtccgaccag catgccaaat aataccgacc agataatgct ccagcgactg
     6601 tcattgattt gttgggtcac gcggcttaac tcaaggccgc tcaccaccac gccaatttgt
     6661 ttatgatttt catcgtagat gggggtaaat acgcgtaaag cctgcgccag aaaaccgcga
     6721 ttgatagcga cattttcttt gccattcagc gctttaagga tgtcatcacc tttaaatggc
     6781 tgaccaatac gctgggcttc aggatgcgag tagcgaagac tttgcatatc cgtaacgaca
     6841 ataaacagca gatcgttgcg tttgcgcacg gcttccgcga tggcctggat tccgctctcc
     6901 tgcggttttt tctgcaagcc ctgacggatt tccggcgagt cggcgagggt acgcgccact
     6961 gccagtgcct tgttggccag cccgtctcgt gtcatatcac tgatttgcga gaagtaaatc
     7021 agatgcacca ccaatagcac cgagaactgt accgcgctga ccattaagat cactgtggta
     7081 ctcaatttca tcggacgttt gagtaacatg cggtagggca atgaatgtct catcagcttc
     7141 cttgtgtgac aaatttctta agcattatct ctgatgaggc gggtaattca aagggcgtaa
     7201 gaatgattgg ctatataggg gaagagactc tggcaacgga aactgccagt gctgtatgaa
     7261 gattccaggg ctatgcttat agcgataatc atactgatga gagagggaaa gtcatggatc
     7321 aggcgctact ggacgagggt tatcgctgtt ataccggcga aaagatcgat gtctatttca
     7381 acactgcgat atgtcagcat tctggcaatt gcgtacgtgg caacggcaag ttatttaatc
     7441 tcaaacgaaa gccgtggatc atgccggatg aagtcgacgt cgtcactgtg gttaaagtga
     7501 ttgatacgtg cccgagcggc gcgctgaaat accgtcataa ataagcgagg gtaaaatgga
     7561 aatacgcgaa ggccacaata aattttacat taatgacgaa cagggcaagc aaatcgctga
     7621 aattgtcttt gtgccgaccg gagagaattt agcgattatc gaacataccg atgtcgatga
     7681 aagcctgaaa gggcagggga ttggtaaaca gctggttgcg aaagtcgtgg aaaaaatgcg
     7741 tcgggaaaaa cgaaaaatta tcccactatg cccatttgcg aaacacgaat ttgataaaac
     7801 gcgggagtat gatgatattc gcagttgatg ggagagtaca gagtcacgat atttttcatg
     7861 ctctccgcgg agtgatgcag gagagcatct gaagggtagg gggatgcaca aagaatgggc
     7921 agagagcgcg tttttttgtc ccacgtcatc ccctttactg agcaaaaaaa agaatatctc
     7981 ctatatgaga atcatcaatc ggggttaata agttttgcgt ccccagagca ttcaatattg
     8041 ataggagtca tattatggaa ggtaaaaaca agttcaatac ttatgttgtt tcttttgatt
     8101 atccatcatc ttattcctca gtgttcttaa ggttaagatc attgat
//
LOCUS       DADMJE010000172         8083 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.175, whole genome shotgun sequence.
ACCESSION   DADMJE010000172 DADMJE010000000
VERSION     DADMJE010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 8083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8083
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.175"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(72..137)
                     /locus_tag="JN001_003535"
                     /pseudo
     CDS             complement(72..137)
                     /locus_tag="JN001_003535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000280980.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease"
     gene            370..474
                     /locus_tag="JN001_003536"
                     /pseudo
     CDS             370..474
                     /locus_tag="JN001_003536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            814..1071
                     /locus_tag="JN001_003537"
     CDS             814..1071
                     /locus_tag="JN001_003537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016230781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm development YmgB/AriR family protein"
                     /protein_id="HAY9054641.1"
                     /translation="MHSDYYNMVFGEKLANILYEANSQFFYERNVIEEAVNALFCERE
                     IINNKNIIKKLMFFLSDVNHTKKDVVQSALNIIIDITSGDI"
     gene            complement(1234..1443)
                     /locus_tag="JN001_003538"
     CDS             complement(1234..1443)
                     /locus_tag="JN001_003538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000937735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054642.1"
                     /translation="MLPSETMIWQPEFTDKTLSRKPGAVHLAACPLLLDKIITIHRVK
                     QVVTASLKLRDYDAQVAEAMPMIPK"
     gene            complement(1409..1540)
                     /locus_tag="JN001_003539"
                     /pseudo
     CDS             complement(1409..1540)
                     /locus_tag="JN001_003539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            1822..3180
                     /locus_tag="JN001_003540"
     CDS             1822..3180
                     /locus_tag="JN001_003540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000823236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase-like activity of phytase family
                     protein"
                     /protein_id="HAY9054643.1"
                     /translation="MKRKIIPVLIGCTLSFSALAAQPTAERYVVSFPEGTHVNYAGAF
                     ASAFPNGLPVGIGSGLLFTGKQGDALTFATITDRGPNADSPKEGKNETKIFVTPDFAP
                     LLMTIRVQNGKAEAIDPRPLHDDKGAINGLPLASDVIGSTNEVAFSDTLHRLKGDNHG
                     LDTEGITPDGKGGYWLCDEYGPFLINIDSKGKILAIHGPQAAEGEKAIAGGLPNILKW
                     RQANRGFEGLTRMPDGRIIVAVQSTLDIDAKSKKKALFTRLVSFDPASGKTAMYGYPI
                     DSAAYSKNSDAKIGDIVALDNQHILLIEQGRDKNNRMRNLIYEVDLNKASDLSGFDKP
                     GEYPEFDDEKTLSQRGITLAQKTQVVDLRSLGWQQEKAEGLALIDSKTLAVANDNDFG
                     VKVAMQHPVEGKTFKDYRVNAEGKLTLDDKQVETTLRVKPLEKPESDSELWIVTLPEA
                     LK"
     gene            complement(3419..4804)
                     /locus_tag="JN001_003541"
                     /pseudo
     CDS             complement(3419..4804)
                     /locus_tag="JN001_003541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            complement(4854..5201)
                     /gene="tnpB"
                     /locus_tag="JN001_003542"
     CDS             complement(4854..5201)
                     /gene="tnpB"
                     /locus_tag="JN001_003542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019104956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY9054644.1"
                     /translation="MIPLPSGTKIWLVAGITDMRNGFNGLAAKAQTALKDDPMSGHVF
                     IFRGRSGSQVKLLWSTGDGLCLLTKRLERGRFAWPSARDGKVFLTQAQLAMLLEGIDW
                     RQPKRLLTSLTML"
     gene            complement(5198..5578)
                     /locus_tag="JN001_003543"
     CDS             complement(5198..5578)
                     /locus_tag="JN001_003543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000603938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence hypothetical
                     protein"
                     /protein_id="HAY9054645.1"
                     /translation="MQKNVTPGRRKGCPNYPPEFKQQLVAATCEPGISISKLALENGI
                     NANLLFKWRQQWREGKLLLPSSESPQLLPVTLDAAAEQPESLAEDPETLSISCEVTFR
                     HGTLRFNGNVSEKLLTLLIQELKR"
     gene            complement(5933..6367)
                     /locus_tag="JN001_003544"
     CDS             complement(5933..6367)
                     /locus_tag="JN001_003544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001556209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054646.1"
                     /translation="MRILNCYMANDSKGHFVTAKEAAKHNRQDVLCCVSCGCPLTLQR
                     GNDGQPPWFEHDQMTVAEKILLRCTWLDPAEKEARRLHLQGMTVPDYTVKVRKWFCVM
                     CDENYEGEKCCPRCGTGVYSRAWGRQEVPSEDARADNPLQRL"
     gene            complement(6355..6756)
                     /locus_tag="JN001_003545"
     CDS             complement(6355..6756)
                     /locus_tag="JN001_003545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004020115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054647.1"
                     /translation="MYAKSFIALDGNGRLTGARTAQAAPYANYTCHLCGSALRYHPQY
                     DTELPWFEHTDDRLTEHGQQCPYVRPERREIQLIKRLQQFVPDALPVVRKASWHCRQC
                     HHDYYGEQYCTHCQTGGFSIPRTTQEEICEF"
     gene            complement(7016..7585)
                     /locus_tag="JN001_003546"
     CDS             complement(7016..7585)
                     /locus_tag="JN001_003546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000221568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inovirus Gp2 family protein"
                     /protein_id="HAY9054648.1"
                     /translation="MTYKYNPFWQQRIRETVRHALDVHPRLTALRVDLRLPDVPAATD
                     AAVISRFINALKARIDAYQKRKHREGKRVHPTTLHYVWAREFGECKGKKHYHLMLLVN
                     RDTWCRAGDYRAPESLAGMIKQAWCSALGVDVGCHATLVHFPAWPAVWLARNDDTGFQ
                     QVLERADYLAKEHTKAHCTGERNFGCSRS"
BASE COUNT         1993 a         2067 c         2059 g         1964 t
ORIGIN      
        1 gctgcatgac aaggtcatcg ggcattatct gaacataaaa cactatcagt aagttggagt
       61 cattacctcc tcccgaactc aaagctatca tacagataat tactggttaa ccctatatag
      121 ggcattttaa agtgttgtga tcttacccag caatagtgga cacgcggcta agtgagtaaa
      181 ctctcagtca gaggtgactc acaagacaaa acagtttcaa ccagtaaaaa aacgtaaaca
      241 ccattcgcat gaatttcgta gttaagatct gaagcttgca gaatgcatcg gtgttactgc
      301 cggagtccgt gaacttagtc tgcatgaatc accacagctt tacatctgtc gcagtaaaca
      361 gcaaaatcag caaacttact taattatatc gagtgcgatt acaatcgctg gcgatggtac
      421 agttggtgtg gcggtctcag tccggaacaa tttgaaaatc agaatctcac ttaaaacggc
      481 atccatttta caaaagatgg ccgtctgtgt atttgtaatg aataccttct acatgtttag
      541 agtgcataat ccacgacaag gcgatatcct aaaaattagc tagcaggcaa ctttgatggc
      601 atagataatg tttttagtaa aaaagagttg actgaatata atacagcctc ttcctacata
      661 agaaggaatg tgctcacaaa aaaaaaacat tagtctgctt cctgttctta caataatcag
      721 tattatgtat tttatttata tagcaaaata tgcttattac acctgtcata attaggcatg
      781 gtaaaattat tgactgaacc ctgggggaga aagatgcaca gtgattatta taatatggtt
      841 tttggtgaaa aattggccaa tattttatat gaagctaact ctcaattttt ttacgagaga
      901 aatgtcatag aagaggcagt caacgcttta ttctgtgagc gtgaaataat aaacaacaag
      961 aacataataa agaagctgat gttctttttg tcagatgtta atcacaccaa gaaagatgtt
     1021 gttcagagcg cacttaatat tatcattgac attacatcag gtgatatttg agattttaca
     1081 taaaagataa tctctcaagg agtcttatct gaaaacgaaa tatatagtcc ctctcgtttt
     1141 gtaatatcga ttggctttgt tgaatcggtt acgtaccccg gagctggtca tattttcagg
     1201 taatacacac gctttcagac atttcggctt tcgtcatttt ggtatcatgg gcatagcttc
     1261 tgctacctga gcatcataat cacgcagctt cagtgaagca gtgaccacct gtttaacccg
     1321 gtgtatcgtt atgatcttat ccagcaataa tggacacgcg gctaagtgaa ccgccccggg
     1381 tttcctggag agtgttttat ctgtgaattc aggctgccag atcatcgttt ccgatggaag
     1441 cataataagc tttttctgct tctgccggtg ggatatggcc ctgcctttcc agcaatcgtc
     1501 gattgttata ccagtccacc cacgtgagtg tggtcagctc atcatactga cacgtgcatt
     1561 acccctaccg cgataatgca accgtacaat atagggcgtt tcctaaacgc agccctcatc
     1621 actccaatcc aacaagacac agcatttttg atcacgaaga aagacaaata atttccgtaa
     1681 atgtttccgt tgttacaaat aacaacagtg ttttacattt ctttggcctc aggcccgcgc
     1741 atgttgccat tcgatgttat tttcctgact cgtttcttct ttatggtgta gtgtgatctt
     1801 cactttatgg atgctaacaa tatgaaaaga aaaattattc ccgtgctaat cggttgtacg
     1861 ctctctttct ctgccctggc ggcacaacct acggctgagc gctatgtcgt cagttttcca
     1921 gaaggcacgc acgtgaacta cgccggcgca tttgccagtg cattcccgaa cggccttccg
     1981 gttgggatag gttctggcct gctgttcacc ggtaaacagg gcgatgccct gacattcgca
     2041 accattaccg atcgcggtcc gaacgcggat tcaccgaaag aggggaaaaa cgaaactaaa
     2101 attttcgtta cgccagattt cgcgccgctg ctgatgacga ttcgtgtaca aaacggcaaa
     2161 gcggaggcca tcgatccccg tcctctgcat gacgataaag gtgcgatcaa cggtctgccg
     2221 ctggcaagcg acgtgattgg ctccaccaat gaagtggcct tcagcgacac gttacataga
     2281 ctgaaggggg ataatcacgg gctggatacg gaagggatca ctccggatgg taaaggaggt
     2341 tactggctgt gcgatgagta tggcccgttc ctgattaaca tcgacagtaa agggaaaatc
     2401 ctggcaatcc acggtccgca ggcggcggaa ggggaaaaag cgattgcggg cggtttgcca
     2461 aatatcctca aatggcgtca ggcgaaccgc ggctttgaag gcctcacccg tatgccggac
     2521 gggcgtatta ttgtcgccgt gcaaagtacg ctggatatcg acgctaagag caagaaaaag
     2581 gcgctgttta cgcgtctggt gagcttcgat ccggcaagcg gaaaaaccgc gatgtacggt
     2641 tatcctatcg acagcgcggc ctacagcaaa aacagcgacg ctaaaatcgg agacatcgtg
     2701 gcgctcgata accagcacat cctgctgatc gaacagggaa gagataaaaa caacagaatg
     2761 cgtaacctga tttacgaggt cgatctcaat aaggcgagcg acctgtcagg cttcgacaag
     2821 ccgggtgagt atccggagtt tgatgatgag aaaaccctgt cacagcgcgg cattaccctt
     2881 gcgcagaaaa cgcaggttgt tgatctgcgc tccttgggct ggcagcagga gaaggctgaa
     2941 gggttggcgc tgatcgacag caaaacgctg gcggtggcga acgataacga ctttggcgtg
     3001 aaggtggcga tgcaacatcc ggtcgagggc aagacattca aggattatcg ggtgaacgcg
     3061 gaaggaaagc tgacgcttga cgacaagcag gttgaaacga ccctcagagt gaagccactg
     3121 gagaaaccgg agtctgacag tgaactgtgg attgtgacgc tgccggaagc gttgaaataa
     3181 gtttataagg tacggacagc agtatcgctt agtttttcaa attcatgtat gtgaacaata
     3241 ttggggttcc ggcgtagacc ctcaatgaaa gcgtcaccac gtgaaaacat gcctgcacgg
     3301 tttacacgtc atcccatggt ggcagccggt taactttcct gctacaccag tggaaaaagg
     3361 ccataagcag tccgaacaaa agtaagcgta cagcgagggc cgtattgacg gggatgtgtt
     3421 attcagctgg cagtgctatg cgccacggaa gcagttcgct gacccggttg accggccagt
     3481 ctgctatgac gccaagcaca tggcgaaggt agctttctgg atccacgtca ttcagtttgc
     3541 acgtcccgat caggctgtac agtagcgctc cccgctcacc accatggcca gagccgaaga
     3601 acagggtctt catcttttca cgcaaccagc tttccaggga tttcaacagc ggtttcgttt
     3661 ttcgctgacg ttcagcaagc cgctgctctg ccggcattcc ccttatatcc gcctctatgg
     3721 cgtacaactg accgatctgc tccagggctt cttccgtcag tgctgacggg atgcggacgt
     3781 gcacatcgtg gatctttcag cgggcatgag cccagcaggc agcttccgtt atcccaccat
     3841 tgcgatacag ctcgttgaac ccggcgtacg catccgcttg cagcacaccg ctgaagcaag
     3901 caagatgagt ctgcggatgg atgccttttc tgtccgggct gtaagcgaac ctcactgcag
     3961 gtgccaacgc tgacccggca ttgcggtcat cacgaacata cgcccacaac cgcccggtct
     4021 tcgtcttctt attacccggc agcagtacct ggaccggggt atcatcggca tggagtttgc
     4081 cgtcagtcat gacatagcca tgaagcgcct cttccagcgg agacagcagc cggcagcatg
     4141 catccaccca gcccgacagc agtgaacggc tcagctccac accttgccgg ccgtatattt
     4201 ctgactggcg atacagcggg gtgtgctctg catacttcga ggtcagcacg cgggccagca
     4261 gccccggtcc ggcgataccc cgctcgatgg gccgcgaagg tgcaggtgcc tgcacgatgg
     4321 tatcgcactg agtacaggca tgtttttcct gtaccgtccg gataacccgg aaggcgctac
     4381 gcatcaactc cagctgttcg gcggtatcct cgcccagata gctcagtgaa ccgccgcagt
     4441 tcgggcagca cggcgccgca ggcaacagtc gcttttcgtc acggggtagt gattcaggga
     4501 acggcttacg ggtgcgggtc tgacgcaacg gacgctgtac tgccgggtca tacaccctac
     4561 cagtcagcgt atcgctctct ttctgaagtc ggttcagatc ggcttccatt tgtgcgatac
     4621 ggcgggagac tttttcggaa cgactgccga agttcatccg gcggagttta tccagctgcg
     4681 cctgcagatg gtctatttcg cgctcccggt tgctcagctt ttcctgcagg gcgtggatca
     4741 gcgcttcctg ttcggccagg cgctgtttca gcaggaagat gtcgtcagaa gagatgtcgt
     4801 tcataagccc gtattttacc gggcttattc tgtgacaacc aggataaaga gatttacagc
     4861 atggtcaggg aggtcagcag ccgcttaggc tgtcgccagt cgataccttc cagcagcatc
     4921 gccagctgcg cctgcgtaag gaacactttg ccatcacggg ctgacggcca ggcgaagcgc
     4981 ccacgctcca gccgtttggt caggaggcac agtccgtcac cggtggacca cagcagttta
     5041 acctgactgc cgctgcggcc ccggaaaatg aaaacatggc cggacatggg atcgtctttc
     5101 agcgccgttt gtgctttcgc agccaggccg ttgaagccat ttctcatatc ggtgataccg
     5161 gcaaccagcc aaattttggt cccggaaggt aacgggatca tcgcttcagt tcctgtatca
     5221 gtagagtcag gagcttttcg ctgacattgc cattgaagcg gagcgtcccg tgccggaacg
     5281 ttacctcaca gctgatactg agggtttccg ggtcctctgc gagcgattct ggctgttcgg
     5341 cagcggcatc gagagtcaca ggaagtagct gggggctctc tgaagaaggt aatagcagct
     5401 ttccctcgcg ccattgttgt cgccatttga acaacagatt ggcgttaatg ccattttcaa
     5461 gagcaagttt tgagatggat atcccgggtt cacaggtggc agcaacgagc tgctgtttaa
     5521 attcgggagg ataattaggg cagccttttc gcctgccggg agtcacattt ttctgcatat
     5581 ctgatacttt ggttcccact acttatttgg tggacaccac tttgtctaat tcgtcagatt
     5641 ctgaccagac ggttcaggct gtacgcttac cactatttta tccctgttga atttggttaa
     5701 gccggtgcag acgcgccggg aaacgcacac ctgaaccggc acaataaaat acaatacaac
     5761 cccctgttac tggagatacg aatggaatga cgaggcagcc tgtcagtcac agggggctgt
     5821 tggcataaaa tcaacggaaa ggccaccaac accggaatta agctccacag tccccgcact
     5881 ggcaatccat tcccgggaaa ggcatcaccg caaactgctc cggaggcaac cattacagcc
     5941 tctgtaacgg attatcagcc ctggcatctt ccgacggcac ctcctgccgc ccccacgccc
     6001 tgctgtatac cccggtaccg cagcgtgggc agcacttttc cccctcataa ttttcgtcac
     6061 acatcacaca aaaccacttt ctcaccttca ccgtataatc cggaaccgtc atgccctgca
     6121 gatgcaaacg acgggcctct ttctctgccg ggtcaagcca ggtacatcgc agcaggattt
     6181 tttcagcgac agtcatctgg tcatgttcaa accacggtgg ttgtccgtca ttgccccgct
     6241 gaagtgttaa cgggcatcca caggacacac agcacaaaac gtcctgtcgg ttgtgcttcg
     6301 cagcttcttt cgccgtaaca aaatggcctt tgctgtcatt cgccatataa cagttcagaa
     6361 ttcgcatatt tcctcctgag ttgtccgggg aatactgaat cctccggtct ggcagtgtgt
     6421 gcagtactgc tccccataat aatcgtggtg acattgtctg cagtgccagc tggctttacg
     6481 caccacgggt aaggcatccg gtacgaattg ctgcagacgt ttaatcaact gtatttctct
     6541 gcgctccggc ctgacataag ggcactgttg accgtgctct gtcagcctgt cgtcagtgtg
     6601 ttcaaaccag ggaagttcag tgtcgtattg cggatggtat ctgagtgcac tgccacacaa
     6661 gtggcaggtg tagttagcat aaggtgcggc ctgtgcagta cgggcgcccg tcagacgtcc
     6721 gttgccatca agagcgataa aggattttgc gtacatagtc atatacctca gccgccagac
     6781 gacacgcagg caacagccgt cccggtacgg gcagcgtggt cagggtgtga atggcggttc
     6841 agttaaaatc tggactggag tttgggtaaa gcaggctggt tgctgttaca gcactgtggt
     6901 tgtcacacaa tggaacactg acgtaaaaaa cagtcagtgg gcgagtggat acatcgttgc
     6961 cgccagacaa caacccatac ttttggtttg ccggatattg gcgcgccagt cgtgctcaac
     7021 tccggctaca gccaaaattg cgctcaccgg tgcagtgagc tttggtatgc tccttcgcca
     7081 gatagtcagc acgttccagc acttgctgaa agccggtgtc atcattacgc gccagccaca
     7141 ccgccggcca ggccggaaaa tgcaccagcg tggcatggca cccgacatcc actcccaggg
     7201 cactgcacca cgcctgttta atcatcccgg cgagagactc cggagcgcgg taatcaccgg
     7261 cacgacacca ggtatcccgg ttgaccagca gcatcaggtg atagtgtttt ttacctttgc
     7321 actccccaaa ctcccgggcc cagacgtaat gcagggttgt gggatgcacg cgtttacctt
     7381 cccgatgctt acgtttctgg taagcgtcga ttcgggcttt cagggcattg atgaagcggg
     7441 atatcacagc tgcgtccgtt gctgccggca catccgggag acgcagatca acccgaagtg
     7501 ccgtcaggcg gggatgaaca tccagtgcgt gccgcaccgt ctcacgaata cgttgctgcc
     7561 agaaggggtt gtatttgtag gtcatggtta aatctccgta tggttcatac ggaatagcca
     7621 cgtcgtaaaa aatacgcaga gtccctgaag tgacctccgg taggacactg tctcaggcac
     7681 tctgtgataa cccgaacggt cgtctccgga ctgacggttg aattttcagc gttgtttttt
     7741 aatgtaaaaa accggttacg ggtaaggctg tgaggaggga gtgatggtga tacgcaaaaa
     7801 gaagtgcagg gactgtggaa acgcgattac tcataataca gtgtgttgcc cgtattgtgg
     7861 tcctgctgac tactgtcagc gtcagtgtgt gtatactgtg tagctggtga gataacggtt
     7921 catgtatccc ctgagctgac aatgtaccgt gtatattaag cgtaaccgac aggttctcct
     7981 tcataccata ttaaattttc caggtattgc cgctgcctta tttcgtccca tacaggaaaa
     8041 ctcatctggg tttctgacaa atacgcgaaa ctcacagccc ctc
//
LOCUS       DADMJE010000173         7982 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.176, whole genome shotgun sequence.
ACCESSION   DADMJE010000173 DADMJE010000000
VERSION     DADMJE010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7982)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7982)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7982
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.176"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(11..268)
                     /locus_tag="JN001_003547"
     CDS             complement(11..268)
                     /locus_tag="JN001_003547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010921692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
                     /protein_id="HAY9054649.1"
                     /translation="MLPPNIRGYAPQITGIAETNARVVVSQQGRAIYDSTVPAGTFSI
                     QDLSSSVRGILDVEIFEQNGKRKHFQVEMCRCAFLIQTWSE"
     gene            complement(454..3762)
                     /gene="icsA"
                     /locus_tag="JN001_003548"
                     /gene_synonym="virG"
     CDS             complement(454..3762)
                     /gene="icsA"
                     /locus_tag="JN001_003548"
                     /gene_synonym="virG"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane autotransporter IcsA"
                     /protein_id="HAY9054650.1"
                     /translation="MNQIHKFFCNMTQCSQGGAGELPTVKEKTCKLSFSPFVVGASLL
                     LGGPIAFAIPLSGTQELHFSEDNYEKLLTPVDGLSPLGAGEDGMDAWYITSSNPSHAS
                     RTKLRINSDIMISAGHGGAGDNNDGNSCGGNGGDSITGSDLSIINQGMILGGSGGSGA
                     DHNGDGGEAVTGDNLFIINGEIISGGHGGDSYSDSDGGNGGDAVTGVNLPIINKGTIS
                     GGNGGNNYGEGDGGNGGDAITGSSLSVINKGTFAGGNGGAAYGYGYDGYGGNAITGDN
                     LSIINNGAILGGNGGHWGDAINGSNMTIANSGYIISGKEDDGTQNVAGNAIHITGGNN
                     SLILHEGSVITGDVQVNNSSILKIINNDYTGTTPTIEGDLCAGDCTTVSLSGNKFTVS
                     GDVSFGENSSLNLAGISSLEASGNMSFGNNVKVEAIINNWAQKDYKLLSADKGITGFS
                     VSNISIINPLLTTGAIDYTKSYISDQNKLIYGLSWNDTDGDSHGEFNLKENAELTVST
                     ILADNLSHHNINSWDGKSLTKSGEGTLILAEKNTYSGFTNINAGILKMGTVEAMTRTA
                     GVIVNKGATLNFSGMNQTVNTLLNSGTVLINNINAPFLPDPVIVTGNMTLEKNGHVIL
                     NNSSSNVGQTYVQKGNWHGKGGILSLGAVLGNDNSKTDRLEITGHASGITYVAVTNEG
                     GSGDKTLEGVQIISTDSSDKNAFIQKGRIVAGSYDYRLKQGTVSGLNTNKWYLTSQMD
                     NQESKQMSNQESTQMSSRRASSQLVSSLNLGEGSIHTWRPEAGSYIANLIAMNTMFSP
                     SLYDRHGSTIVDPTTGQLSETTMWIRTVGGHNEHNLADRQLKTTANRMVYQIGGDILK
                     TNFTDHDGLHVGIMGAYGYQDSKTHNKYTSYSSRGTVSGYTAGLYSSWFQDEKERTGL
                     YMDAWLQYGWFNNTVKGDGFTGEKYSSKGITGALEAGYIYPTIRWTTHNNIDNALYLN
                     PQVQITRHGVKANDYIEHNGTMVTSSGVNNIQAKLGLRTSLISHSCIDKETLRKFEPF
                     LEVNWKWSSKQYGVIMNGMSNHQIGNRNVIELKTGVGGRLADNLSIWGNVSQQLGNNS
                     YRDTQGILGVKYTF"
     gene            4291..5493
                     /gene="virA"
                     /locus_tag="JN001_003549"
     CDS             4291..5493
                     /gene="virA"
                     /locus_tag="JN001_003549"
                     /EC_number="3.4.22.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858314.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-tubulin-specific protease"
                     /protein_id="HAY9054651.1"
                     /translation="MQTSNITNHERNDSSWMSTVKSTTEVSWNKLSFCDVLLKIITFG
                     IYSPHETLAEKYSEKKLMDSFSPSLSQDKMDGEFAHANIDGISIRLCLNKGICSVFYL
                     DGDKIQSTQLSSKEYNNLLSSLPPKQFNLGKVHTITAPVSGNFKTHKPAPEVIETAIN
                     CCTSIIPNDDYFPVKDTDFNSVWHDIYRDIRASDSNSTKIYFNNIEIPLKLIADLINE
                     LGINEFIDSKKELQMLSYNQLNKIINSNFPQQDLCFQTEKLLFTSLFQDPAFISALTS
                     AFWQSLHITSSSVEHIYAQIMSENIENRLNFMPEQRVINNCGHIIKINAVVPKNDTAI
                     SASGGRAYEVSSSILPSHITCNGVGINKIETSYLVHAGTLPSSEGLRNAIPPESRQVS
                     FAIISPDV"
     gene            5672..6359
                     /locus_tag="JN001_003550"
                     /pseudo
     CDS             5672..6359
                     /locus_tag="JN001_003550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            6370..6727
                     /locus_tag="JN001_003551"
                     /pseudo
     CDS             6370..6727
                     /locus_tag="JN001_003551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            6922..7161
                     /locus_tag="JN001_003552"
     CDS             6922..7161
                     /locus_tag="JN001_003552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858310.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="reverse transcriptase"
                     /protein_id="HAY9054652.1"
                     /translation="MPQGGVISPLLSNIILNEFDQYLNKRYLSGKARKDRWYWNHSIQ
                     RGRSTAVKENWQWKPAVAYCCYADDCVPRRRVLGT"
BASE COUNT         2360 a         1829 c         1590 g         2203 t
ORIGIN      
        1 taatttatac ctactctgac caagtctgga taagaaaggc acacctgcac atttctactt
       61 ggaaatgttt tcttttacca ttttgctcaa aaatttcaac atccaatatt cctcgtacag
      121 aactactcaa gtcctgaata gaaaaagttc cagctggtac agtagagtca tatattgctc
      181 gaccttgttg agatacaaca acacgtgcat tagtttctgc aataccagta atctgaggcg
      241 cataaccacg aatatttggc ggtagcattc gttcatcgct ttctaatgca attcctgtgt
      301 aacgccaagc aacagcgcat tctggcgcat gatctggtaa acacgtttgg cattgatcgc
      361 aggcatacca tcatgtgcac aaaaacccac cgagctttta cacggtgggt cccagagaaa
      421 tgcaggacat caacacgccc tgcattttta ttatcagaag gtatatttca cacccaaaat
      481 accttgggtg tctctgtaac tgttattacc caattgctga gatacgtttc cccagatgct
      541 taggttatct gcaagacgcc cccccacacc agttttgagt tcaatcacat tacggttgcc
      601 tatctggtga tttgacatgc cattcataat tacaccatat tgctttgagc tccatttcca
      661 attcacttcc aaaaatggtt cgaacttacg aagagtctcc ttatcgatac aactatgact
      721 aattaaggat gtacgcaatc ccaattttgc ttgaatatta ttgaccccag aggatgtgac
      781 catagtgcca ttgtgttcaa tatagtcgtt tgcttttacc ccatgcctag ttatctggac
      841 ttgtggattg agatacaatg cgttgtcaat attattatga gtagtccagc gtatggttgg
      901 gtagatatag ccagcttcca aagctcctgt tattcctttg ctggaatatt tctcaccagt
      961 aaacccatct cctttgactg tattattaaa ccaaccgtac tgcaaccaag catccatata
     1021 tagacctgtt cgttcttttt catcctgaaa ccaagaactg tacaaaccgg cagtataacc
     1081 gctcacagtt cctcgtgaac tataactagt atacttatta tgagttttgc tatcctgata
     1141 tccataagct cccataatac ccacatgcaa gccatcatga tcagtgaagt ttgtcttcaa
     1201 aatatctcca ccaatctgat aaaccatcct gttagctgtg gtttttaatt gtctatcagc
     1261 taaattatgc tcattatgtc caccaacagt acgaatccac atggtggttt cgctgagctg
     1321 acctgtagta ggatcaacaa tagtgctacc gtgtcggtca tagagagaag gactaaacat
     1381 cgtgttcatt gctatcaggt tagcaatata actgccagct tcagggcgcc atgtgtgaat
     1441 actaccttca cccaaattaa gtgaagatac aagctgtgaa ctagctcggc gactactcat
     1501 ttgagtagac tcttgattgc tcatctgttt tgattcttga ttatccatct gactagttag
     1561 ataccactta ttggtattca gtccagatac agtgccctgt ttcaggcgat agtcataact
     1621 accagcaaca atacggcctt tctgaataaa agcattctta tcagaagaat ctgtcgaaat
     1681 aatttgaaca ccttcaagag ttttatctcc agagcctccc tcatttgtca ctgcaacata
     1741 ggtaatacca gacgcatggc ctgtaatttc cagccggtca gttttactgt tgtcattgcc
     1801 gagaaccgcg cccaaagata atattccgcc ctttccatgc caattacctt tctgaacata
     1861 ggtctgaccg acatttgacg aactattatt gagaataaca tgaccgtttt tctccagagt
     1921 catgttacct gtgacaatga cggggtcagg caaaaaaggg gcattaatat tattgattag
     1981 cacagtccca ctatttaata aagtgttaac agtttggttc atgcctgaaa aattcaaggt
     2041 agcaccttta ttaacaataa caccagcggt acgtgtcata gcttcaactg tccccatttt
     2101 tagaatgcct gcattgatgt tggtgaaacc agagtaggta tttttttccg ccaaaatgag
     2161 agttccctcc cctgattttg ttagggattt tccgtcccag ctatttatat tatgatggct
     2221 gagattatct gccagaatag tactaacagt aagttcagcg ttttctttca gattgaactc
     2281 tccatgactg tcgccatctg tatcattcca gctcaaaccg tagatcaatt tattctggtc
     2341 actgatatag ctttttgtat agtcaatagc accagtagtg agtaacggat tgatgataga
     2401 tatattagaa acactgaaac ctgttatccc tttatctgca cttagcagtt tatagtcctt
     2461 ctgcgcccag ttatttataa tagcttccac ttttacattg ttgccaaatg acatatttcc
     2521 agaagcttcc agactactga ttccagctaa atttaaagaa ctgttctcac caaaagaaac
     2581 gtcacctgaa acagtgaatt tgttacctga tagtgaaaca gttgtacaat caccagcaca
     2641 taaatcacct tcaatagttg gtgtggtccc agtgtaatca ttgttgataa ttttcagaat
     2701 ggatgaattg ttaacctgta catcaccagt aatgacagaa ccttcatgga gtattaatga
     2761 attgtttcca ccagtgatgt ggatagcatt acctgctaca ttttgtgttc catcatcttc
     2821 tttacctgaa attatatatc cgctattagc aatggtcata ttgctaccat ttatagcatc
     2881 cccccaatgt ccaccattac cgcctaaaat agctccattg ttgattatag acaggttatc
     2941 tcctgtgata gcattaccac cgtagccatc ataaccataa ccgtaagcag cacctccgtt
     3001 gcctccagcg aacgtgccct tattgattac agagaggctg cttcctgtga tggcatcacc
     3061 tccattaccg ccatcaccct caccataatt gttacctcca ttaccaccgg aaatagtccc
     3121 tttgttgatt atgggtagat tgactcctgt gacggcatca cctccattcc ccccatcact
     3181 atcactataa ctatcgccac catgtccacc tgaaataatt tctccattta ttataaacag
     3241 attgtctcct gtaacagcct caccaccatc accgttatgg tcagcaccgc taccgccgct
     3301 accaccaaga atcatgcctt gattgattat agacaagtca gatccggtaa tagagtcacc
     3361 accattaccg ccacaactat taccatcatt attatcacca gcaccaccat gacctgcgct
     3421 aatcataata tcagagttaa tccgtagctt agttctagat gcatgagagg ggttggaaga
     3481 agttatatac cacgcatcca ttccatcttc accagctccc aagggagaaa gtccatcaac
     3541 aggtgttaat aatttttcat aattgtcctc tgaaaaatga agttcttgag tacccgaaag
     3601 aggaatagca aaagctattg gccccccgag caacagggat gcaccaacaa caaaaggaga
     3661 aaaagacaat ttgcatgttt tttcctttac cgtaggtaat tctccggccc ccccctgtga
     3721 acattgggtc atattacaaa aaaatttgtg aatttgattc atgcactata ttatcagtaa
     3781 gtggttgata aacccctaaa aagattccgt tttatccgga ataaagggac gatatatgca
     3841 aaaacatatt aaacaaagcc tcaaccaaaa catgagagct gtgttatata tcaatgcaac
     3901 gggagaaatt tacctgtgtc ttgctttgaa aaaaagaggg ggaaagctat atgttcgata
     3961 ataaattaat aattttacta tgatagtctg cttcagaccg caacttttca gttctttctg
     4021 tacgcttgcc caaagtttaa ccactttgtt tttctataca cccaatggtt ctatctgccc
     4081 cttgatgtta atccccaaag ccaataacat gaatgtattc atatcacaac tttcctacca
     4141 gactctccaa tgcaataact gcataattgt ttttagtgga aatgtatcgt tttcttaaag
     4201 agaagaataa cattccattt tattatgttc ccaatttaat tatattaata tatattggca
     4261 tcaataggaa aatacatcag gagaaatcaa atgcagacat caaacataac taaccatgaa
     4321 agaaatgact catcatggat gtcaactgtc aaatcaacta cagaagtaag ttggaataaa
     4381 ttgagttttt gtgacgtttt actgaaaata ataactttcg gaatatattc tccacacgaa
     4441 actctagccg aaaaatatag cgaaaaaaaa ctaatggata gtttctcacc atcactatca
     4501 caagataaaa tggacggaga gtttgcccac gcaaacatag atggcatttc aatacggcta
     4561 tgccttaaca aaggcatatg ttcggttttt tatcttgatg gagataaaat acaatccact
     4621 caactttcat caaaagaata taataacttg ttaagttcac tcccccccaa acaattcaac
     4681 ttaggaaaag tacatactat tacagctccg gtatcaggga attttaaaac tcacaagcct
     4741 gcaccagaag ttattgaaac agccattaat tgctgtacat cgataatacc aaacgatgat
     4801 tacttccccg ttaaagacac tgattttaat agtgtttggc atgatattta cagagatatt
     4861 cgagcatctg acagcaatag tacaaaaata tatttcaaca atattgaaat accactaaaa
     4921 ttaattgcag atctaattaa tgagttagga attaatgaat tcattgatag caaaaaagag
     4981 cttcaaatgc taagttacaa ccaattaaat aaaataatca attcaaactt cccccaacaa
     5041 gacctatgtt ttcaaacaga aaaacttttg tttacttcac tctttcaaga ccctgcattt
     5101 atatccgcac taacatctgc attctggcaa tctcttcaca tcacgtcttc ctctgtggaa
     5161 cacatatatg cccaaattat gtccgaaaac atagaaaaca ggcttaattt catgcctgaa
     5221 caacgagtta ttaacaattg tggacatatt ataaaaatca acgcagttgt ccctaaaaac
     5281 gacactgcaa tctctgcctc tggggggagg gcttacgaag ttagctcatc aatattacca
     5341 tcgcacataa catgtaatgg tgttggtatt aataaaatag aaacaagcta tctcgttcat
     5401 gctggaacac ttccaagcag tgaagggctt cgcaatgcta tccctccaga aagtcgtcaa
     5461 gtatcatttg ccatcatatc tcctgatgtt taagccaata ttatattggc tgccagactg
     5521 taaaaaaacg ttcttcagaa cagctctata aactattaaa ccaaagctaa aaggatgggg
     5581 accaatagaa tctcagccca tcctttttat atcattatga accgccccgg aaatcctgga
     5641 gactaaactc cctgagaaag aggtaaacag gatgactaaa aatacacgtt tttcccctga
     5701 agtccgtcaa cgggcagttc gtatggttct ggaaagtcag ggcgaatatg actcacaatg
     5761 ggcagcgatt tgttccattg ctccaaagat tggctgtata ctggagactc tgcgtgtctg
     5821 ggtacgccag catgagcggg ataccggggg cggtgaggtg ggctcaccac cgctgaacgt
     5881 cagcgtctga aagagccgga acgtgaaaat cgtgaactgc gccgcagtaa caatatcctt
     5941 cgcctggctt ccgcttattt tgcaaaggcg gagttcgacc gcctctggaa aaaataatgc
     6001 cactgctgga taagctgcgt gagcagtacg gggtcggacc ggtatgcagt gaactgcata
     6061 ttgccccgtc aacgtattac cactgtcagc aacagcgaca tcatcatgat aaacgcagtg
     6121 cccgtgcgca gcgcgatgac tggctgaaga aagagatact gcgcgtatac gatgagaatc
     6181 atcaggtata cgctgtgcgt aaagtcaggc atcagttgtt acgggaaggt atcagagtgg
     6241 ccagatgcac tgtggcacgt ctcatggcgg ttatggggct tgccggtgtt ctccggggta
     6301 aaaaggtcca cactaccgtc agccggaaag ccgttgccgc aggcgaccgc gtaaaccgtc
     6361 atcaaggcaa tgtgccgcgt actccgggtg gcccgcagcg gctggtatac gtggtgtcag
     6421 cggcggacaa ggataaacac acgtcagcag ttccgtcagc actgcgacag cgttgtccgc
     6481 aaggctttta cccagtccag cgttacggtg ccccacgcct gacggatgaa ctgtgtgctc
     6541 tggttaccac tttaacgtaa aaaccgtggc agccagtctg cgccgtcagg aactgagcgc
     6601 aaaagcctcc cagaagttca gcccgatcag ttaccgtgca cacggcctgc ctgtatcaga
     6661 aaatctgctg acgcaggatt tttacgccag tggcccgaac cagaagtggg cgggagacat
     6721 cacgtactat tacagctcac cgactgcggg gaaacacggg gcgccgggtt attgaaggtg
     6781 acctgtccag ctacttcgac acagtacatc accggctgct gatgaaagcc gtctgccgca
     6841 ggatcagtga tgcacgtttt atgagactgc tgtggaaaac gccgtgttga tgttggtctc
     6901 ttccgggcgg tcagtgaaag tatgccacag ggcggtgtga tctcgccgtt gctgtcgaac
     6961 atcatactga atgagttcga ccagtatctg aataaacgct acctgagtgg aaaagccaga
     7021 aaggatcgct ggtactggaa tcacagtatc cagcgaggcc gaagtactgc tgtcaaagaa
     7081 aactggcaat ggaaacctgc cgttgcttac tgttgctatg ccgatgactg tgtgccacga
     7141 aggcgcgtcc tggggacgtg agtccctgtg cagccatgcg gcacaagaga tgagggaagg
     7201 cccctcggtg tcggcgtgca ggcgcaggca ccaaaccatc cactgctgct gcatttaaga
     7261 gatgtggtgg tgagcgagat gggaaaaggt cggacgtgag ccgatcaggt atggttcgaa
     7321 gagacgaacg aaagtgaacc gctgatgatg tgtcgaaagc atatagatga tgtcaaaaca
     7381 atggtggagt cgttcctgtg ggatatgttt actgcctgcg cggcatccgg cataaaagcg
     7441 gcgtgaagtc gattcaggct cttgtgggga acgtggacct gtcaccccga tgtgaaggga
     7501 gaagcgcaag tggaagcccc atgagcgcca gagtaccaat gcggggtaca gggacggagc
     7561 accaagcgat tgcgcagtaa acatgcttga caacttaatt ggggccccct cttcctttta
     7621 tggtgtaatt gtttgattga atacttccgg ggatttcagt atgaaatgaa gtatatttaa
     7681 tatactttac aaaaagtttg tattagtgga ataaggacaa tagtttatcc aaactgccaa
     7741 gcccctttat tataagtaag atctggtact aaataagcgt tctaaaccga cccgagtagg
     7801 cggcctgacg gctgcggctt gtcatggcct gtgattaccg ttataaaaac agacaatatc
     7861 attgtctttc aggtagttat atggcccgtt cagctaaacc acgcaaacga aaacctgcac
     7921 ctcaaagaag caaactcctc cactatgtcg taaaacttca cgaagatgat tttttttgac
     7981 ga
//
LOCUS       DADMJE010000174         7818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.177, whole genome shotgun sequence.
ACCESSION   DADMJE010000174 DADMJE010000000
VERSION     DADMJE010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.177"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            268..411
                     /locus_tag="JN001_003553"
     CDS             268..411
                     /locus_tag="JN001_003553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobF family protein"
                     /protein_id="HAY9054653.1"
                     /translation="MCGIFSKEVLSKHVDVEYRFSAEPYIGASCSNVSVLSMLCLRAK
                     KTI"
     gene            424..633
                     /gene="cspE"
                     /locus_tag="JN001_003554"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
     CDS             424..633
                     /gene="cspE"
                     /locus_tag="JN001_003554"
                     /gene_synonym="gicA"
                     /gene_synonym="msmC"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator/RNA stability
                     regulator CspE"
                     /protein_id="HAY9054654.1"
                     /translation="MAKIKGQVKWFNESKGFGFITPADGSKDVFVHFSAIQGNGFKTL
                     AEGQNVEFEIQDGQKGPAAVNVTAI"
     gene            799..1608
                     /gene="rlmA"
                     /locus_tag="JN001_003555"
     CDS             799..1608
                     /gene="rlmA"
                     /locus_tag="JN001_003555"
                     /EC_number="2.1.1.187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (guanine(745)-N(1))-methyltransferase"
                     /protein_id="HAY9054655.1"
                     /translation="MSFSCPLCHQPLSREKNSYICPQRHQFDMAKEGYVNLLPVQHKR
                     SRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHA
                     FADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIRIYAPCK
                     AEELARVVKPGGWVITATPGPRHLMELKGLIYNEVHLHAPHAEQLEGFTLQQSAELCY
                     PMRLRGDEAVALLQMTPFAWRAKPEVWQTLAAKEVFDCQTDFNIHLWQRSY"
     gene            complement(1605..2171)
                     /gene="mntP"
                     /locus_tag="JN001_003556"
     CDS             complement(1605..2171)
                     /gene="mntP"
                     /locus_tag="JN001_003556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese efflux pump MntP"
                     /protein_id="HAY9054656.1"
                     /translation="MNITATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFG
                     AVETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMIIEGFRGADDEDEEPRRR
                     HGFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMVGRFIGS
                     IIGKKAEILGGLVLIGIGVQILWTHFHG"
     gene            complement(2599..3057)
                     /locus_tag="JN001_003557"
     CDS             complement(2599..3057)
                     /locus_tag="JN001_003557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF986 domain-containing protein"
                     /protein_id="HAY9054657.1"
                     /translation="MTITDLVLILFIAALLAFAIYDQFIMPRRNGPTLLAIPLLRRGR
                     IDSVIFVGLIVILIYNNVTNHGALITTWLLSALALMGFYIFWIRVPKIIFKQKGFFFA
                     NVWIEYSRIKAMNLSEDGVLVMQLEQRRLLIRVRNIDNLERIYKLIVLTQ"
     gene            complement(3112..3963)
                     /locus_tag="JN001_003558"
     CDS             complement(3112..3963)
                     /locus_tag="JN001_003558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020804907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HAY9054658.1"
                     /translation="MVDTTQTTTEKKLTQSDIRGVFLRSNLFQGSWNFERMQALGFCF
                     SMVPAIRRLYPENNEARKQAIRRHLEFFNTQPFVAAPILGVTLALEEQRANGAEIDDG
                     AINGIKVGLMGPLAGVGDPIFWGTVRPVFAALGAGIAMSGSLLGPLLFFILFNLVRLA
                     TRYYGVAYGYSKGIDIVKDMGGGFLQKLTEGASILGLFVMGALVNKWTHVNIPLVVSR
                     ITDQTGKEHVTTVQTILDQLMPGLVPLLLTFACMWLLRKKVNPLWIIVGFFVIGIAGY
                     ACGLLGL"
     gene            complement(3976..4776)
                     /locus_tag="JN001_003559"
     CDS             complement(3976..4776)
                     /locus_tag="JN001_003559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002910918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HAY9054659.1"
                     /translation="MEITTLQIVLVFIVACIAGMGSILDEFQFHRPLIACTLVGIVLG
                     DMKTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVIAGHQSIGAGIALAIPL
                     AAAGQVLTIIVRTITVAFQHAADKAADNGNLTAISWIHVSSLFLQAMRVAIPAVIVAL
                     SVGTSEVQNMLNAIPEVVTNGLNIAGGMIVVVGYAMVINMMRAGYLMPFFYLGFVTAA
                     FTNFNLVALGVIGTVMAVLYIQLSPKYNRVAGAPAQAAGNNDLDNELD"
     gene            complement(4839..5810)
                     /gene="manX"
                     /locus_tag="JN001_003560"
     CDS             complement(4839..5810)
                     /gene="manX"
                     /locus_tag="JN001_003560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HAY9054660.1"
                     /translation="MTIAIVIGTHGWAAEQLLKTAEMLLGEQENVGWIDFVPGENAET
                     LIEKYNAQLAKLDTTKGVLFLVDTWGGSPFNAASRIVVDKEHYEVIAGVNIPMLVETL
                     MARDDDPSFDELVALAVETGREGVKALKAKPVEKAAPAPAAAAPKAAPTPAKPMGPND
                     YMVIGLARIDDRLIHGQVATRWTKETNVSRIIVVSDEVAADTVRKTLLTQVAPPGVTA
                     HVVDVAKMIRVYNNPKYAGERVMLLFTNPTDVERLVEGGVKITSVNVGGMAFRQGKTQ
                     VNNAVSVDEKDIEAFKKLNARGIELEVRKVSTDPKLKMMDLISKIDK"
     gene            6273..>7818
                     /gene="yoaE"
                     /locus_tag="JN001_003561"
     CDS             6273..>7818
                     /gene="yoaE"
                     /locus_tag="JN001_003561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family cation transport protein YoaE"
                     /protein_id="HAY9054661.1"
                     /translation="MEFLMDPSIWAGLLTLVVLEIVLGIDNLVFIAILADKLPPKQRD
                     KARLLGLSLALIMRLGLLSLISWMVTLTKPLFTVMDFSFSGRDLIMLFGGIFLLFKAT
                     TELHERLENRDHDSGHGKGYASFWVVVTQIVILDAVFSLDAVITAVGMVNHLPVMMAA
                     VVIAMAVMLLASKPLTRFVNQHPTVVVLCLSFLLMIGLSLVAEGFGFHIPKGYLYAAI
                     GFSIIIEVFNQIARRNFIRHQSTLPLRARTADAILRLMGGKRQANVQHDADNPMPIPE
                     GAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPV
                     CRGELDEIIGIVRAKELLVALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS
                     FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDADETPEIITDGDGWLVKGGTDLHALQQG
                     LDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKE
                     QPAHDED"
BASE COUNT         1986 a         1911 c         1942 g         1979 t
ORIGIN      
        1 gcactatgta ataacttctc ccactggcct ggaacaactg aacttattga actatgttag
       61 aaaatacgcc agtttaagta tctgcctgaa ctggcaaggt taagcacaat gatatatcgg
      121 cgcgtattcc gttgcataag tgtgcaaaaa aagtggaaga cgtatcgaga tttgtgcgtc
      181 tgatcgagac atgtttaaaa atggcttgcc ataattaacg ttgtatgtga taacagattt
      241 cgggttaaac gaggtacagt tctgtttatg tgtggcattt tcagtaaaga agtcctgagt
      301 aaacacgttg atgttgaata ccgcttctct gccgagcctt atattggtgc ctcatgcagt
      361 aatgtgtcag ttttatctat gttatgcctg cgggcgaaga aaacaatcta aggaattttt
      421 caaatggcaa agattaaagg tcaggttaag tggttcaacg agtctaaagg ttttggcttc
      481 attactccgg ctgatggcag caaagacgtg ttcgtacact tctccgctat ccagggtaat
      541 ggcttcaaaa ctctggctga aggtcagaac gttgagttcg aaattcagga cggccagaaa
      601 ggtccggcag ctgttaacgt aacagctatc tgatcgaatc cactgatctg aagtgtgaat
      661 acgcttcaat ctcgctataa agcctcgtcg aatgcgaggc tttttactat gctttatctt
      721 cgctcctggc gttcggatat ttgcccgccg cgtgattcgc gttacacttg cggcctttag
      781 tatcctgccg gagttgtcat gtctttttcc tgtccacttt gccatcagcc tctttcgcgt
      841 gaaaaaaaca gctatatctg tccccagcga catcagtttg atatggcgaa agaagggtat
      901 gtcaatctgc tgcccgttca gcataaacgg tctcgtgatc cgggcgacag cgcggaaatg
      961 atgcaagcac gccgcgcatt cttagatgcc ggacattatc agccgctgcg tgatgcaatt
     1021 gtcgcccaac tgagggaacg gcttgatgat aaggccacgg cggtgctgga tattggctgt
     1081 ggtgaagggt attacacaca cgcatttgcc gatgcgttgc ccgaaatcac cacgtttggt
     1141 ctggatgttt cgaaggtagc gataaaagcg gcggcgaaac gctatccgca ggtcactttt
     1201 tgtgtcgctt ccagccaccg tttgccgttt tccgatacca gtatggacgc cataatacgt
     1261 atttacgcgc cgtgtaaagc agaagaatta gcacgagtag tgaagcccgg cggctgggtc
     1321 attactgcca cgccgggacc gcgacatttg atggagctga aggggctgat ttacaatgaa
     1381 gtacatcttc atgcacctca tgcagaacaa ctggaaggtt ttacattaca gcagagtgcg
     1441 gagttgtgtt atccgatgcg tcttcgcggt gatgaagctg tcgcattatt gcagatgacg
     1501 ccgtttgcct ggcgtgcgaa gccagaagtc tggcaaacac tggcagcaaa agaagtgttc
     1561 gactgccaga cggactttaa tattcacctc tggcagcgtt cttattaacc gtggaagtgc
     1621 gtccagagga tctggacgcc gatgccgatc agtaccagcc cgccgagaat ttccgctttt
     1681 ttcccaataa ttgagccgat aaagcgacca accatcatcc ctaatgttga cataatcaag
     1741 gttgcacaac caatggccaa tgcggtcgcg ataatgttga cctgcaggaa agcaagacca
     1801 acacccacag ccatggcatc caggctggtg gcaatcgcgg tggttaccag tagccagaaa
     1861 ccgtgtcgac ggcgcggctc ttcatcttca tcatctgcgc cacgaaaacc ctcaataatc
     1921 attcgcccgc cgaggaatat cagcagcaca aacgcaatcc agtggttcca ttcaaggaca
     1981 aaccggctgg ctaacatgcc cattccccag ccgatcagcg gcgtcagggt ttcgacggca
     2041 ccaaaaataa ggccggttcg caatgcttca gaaaatttcg gtttatggag ggtggcacct
     2101 ttaccgattg atgcagcaaa tgcatccatc gacataccaa acgcaagaag aacagtagca
     2161 gtgatattca tgacaatgtc ctgaccgggg tatccataaa acacatcatc gcccccagca
     2221 aacatgcata catgaacaac aagccgtgat ggtttttgcg ttcatgcagg catagcgatt
     2281 gatgtgcata tggtctcgcc tgactgaaag tattcagtcc gtacgtgcca cgttttgcaa
     2341 cgagtatgtt gacacgtaca tttccggaat ctggaaatcg gctactcccc aaatgagggc
     2401 gcaaccttaa catattttga gaatataaaa caactgttgg aatatattat ttcattgctt
     2461 tattgataac gaattcattt agatttatat atcaatgaaa cgttaaaata aataacaaat
     2521 aagggaagag gtaatatagc ctaagctatg tctgattatt aaaaatacac taaacatagc
     2581 tttggctaaa ttcataactt attgagttaa aacgataagc ttataaattc tttccagatt
     2641 gtcgatattt cgaacgcgga ttaacagccg acgctgttct aattgcatca ccaacacgcc
     2701 atcttccgac aagttcatcg ctttgattcg gctatattca atccagacat tggcgaagaa
     2761 aaaacctttt tgtttaaaga tgatcttcgg aacgcggatc cagaatatat aaaaacccat
     2821 cagagccagt gcgcttaata accatgtcgt tattaatgca ccatgattcg tgacgttgtt
     2881 atagataaga atgacaatca atccgacgaa gataacgcta tcgatgcgac cacgccggag
     2941 caaaggaatt gccagcaggg tggggccgtt acggcggggc atgatgaact gatcgtagat
     3001 cgcgaaggcc aggagtgcgg cgatgaaaag aatcagtacc aggtccgtga ttgtcattaa
     3061 tcctccagat aaaaaaacgg ggccaaaagg ccccggtagt gtacaacagt cttacagtcc
     3121 cagcaggccg caagcgtaac cagcgatacc gatgacgaag aagccaacga tgatccacag
     3181 cgggttaact tttttgcgca gtagccacat acaagcaaag gtcagcagca gtggtaccag
     3241 gcctggcatt aactggtcca gaatagtctg gacagtagta acgtgttctt tgcccgtctg
     3301 gtcagtaatg cgagagacaa ccagcgggat gttgacatgt gtccacttgt taaccaatgc
     3361 ccccatgaca aacaggccga ggatagacgc cccttccgtc agtttttgca ggaagccacc
     3421 acccatatct ttaacgatat cgataccttt ggagtaacca tacgctacgc cgtagtaacg
     3481 ggttgccaga cgcaccaggt taaacaggat gaagaacagc agcggaccta acaggctgcc
     3541 gctcatcgcg ataccggcac ccagtgctgc aaataccgga cgtacggttc cccagaagat
     3601 cgggtcgcct acaccagcca gcggccccat caaaccgact ttgataccgt tgatagcacc
     3661 gtcgtcgatc tctgcgccat tagcacgctg ttcttccagc gccagggtta cgccgagaat
     3721 cggcgcagcc acgaacggct gggtgttaaa gaactccagg tgacggcgaa tagcttgttt
     3781 acgagcttcg ttgttctcag ggtagaggcg acgaattgcc ggtaccatag agaagcagaa
     3841 acccagtgcc tgcatacgtt cgaagttcca tgaaccctgg aagaggttag aacgcaggaa
     3901 gacgccacga atatcacttt gagtgagttt tttctcggtg gtagtttgag ttgtatcaac
     3961 catttcgctc acctgttagt ccagttcgtt atcgagatcg ttgttaccag cagcctgagc
     4021 aggcgcaccg gctacgcggt tgtatttcgg gctaagttgg atgtagagca ctgccataac
     4081 agtaccgatc acacccagag caaccaggtt aaagttggtg aatgctgcgg ttacgaagcc
     4141 gaggtagaag aacggcatca ggtagccagc acgcatcatg ttgataacca tcgcataacc
     4201 aaccaccacg atcatgccac cggcgatatt cagaccattg gtcaccactt ccggaatcgc
     4261 attcagcatg ttctgtactt cgctggtacc aacagacagc gcaacgatga cggccggaat
     4321 agccacacgc attgcttgca ggaacagaga agaaacgtgg atccaggaaa tcgctgtcag
     4381 gttgccgtta tcagcagcct tatccgcagc gtgctggaaa gcaacggtaa tagtacgaac
     4441 gatgatggtc agtacctggc ccgcagcggc cagagggatt gccagtgcga tacctgcacc
     4501 aatgctctga tgacctgcga taaccagaat ggtagaaatg atagaagcca gagcggcgtc
     4561 aggcgcaact gcagcaccga tgttcatcca gcccagcgcg atcatttcca gcgtaccacc
     4621 gataataata ccggttttca tatccccaag aacgataccc accagggtac acgcgattag
     4681 cggacggtga aactgaaatt catcgaggat tgatcccata cctgcgatac aggctacgat
     4741 aaataccagc acaatttgaa gagtggtaat ctccattgta cttctcctgt ttacgtaaga
     4801 cttaagtgtg aaaactgagt gataatcaac acaatacgtt acttatcgat tttgctgatc
     4861 agatccatca ttttcagttt cggatcggtg gaaaccttac ggacttccag ctcaataccg
     4921 cgcgcattca gtttcttgaa cgcctcgata tctttttcat caaccgaaac cgcgttattc
     4981 acctgggttt taccctgacg gaatgccata ccaccgacgt taacagaggt gattttcacg
     5041 ccgccttcaa cgagacgctc tacatctgtt gggttggtaa ataacagcat tacgcgttcg
     5101 ccagcatatt tcgggttgtt gtagacgcga atcattttgg caacatcaac tacgtgtgct
     5161 gttacgcccg gaggtgcaac ctgggtgagc agtgtcttac gaacggtatc cgcagccact
     5221 tcatcactaa caacaataat acgggagaca ttggtttctt tggtccagcg ggtggcgacc
     5281 tgaccgtgaa tcagacggtc gtcgatacgc gcaaggccaa taaccatgta gtcgtttggc
     5341 cccattggtt ttgccggagt tggagccgct tttggtgctg cggcagcggg tgctggcgcg
     5401 gctttttcaa ccggtttggc tttcagtgct ttcacgcctt cacggcctgt ttctactgcc
     5461 agcgcaacca gttcatcaaa gcttgggtca tcatcacgag ccattaacgt ttccacgagc
     5521 attggaatgt taacgcctgc aatgacttca taatgctctt tgtcgacgac aatgcggctg
     5581 gcagcattga acgggctgcc tccccatgta tcaacgagaa acagcacgcc tttagtggtg
     5641 tcgagttttg ccaactgagc gttgtacttt tcaatcagcg tttcggcatt ttcacctgga
     5701 acgaaatcga tccagccgac gttttcctgc tcgcctaaca gcatttctgc cgttttaagc
     5761 aactgctctg cagcccaacc atgtgtgcct ataacaatag caatggtcac ttgctacctc
     5821 ctttattatc gttaacacct caacgtgcca gatgtatttt tgaatcgtcg tccacaatcg
     5881 aatcgattca gataagggct acaaccaaaa acccctgcgt ttcgcgattt attttagata
     5941 tcgaaaaaat tattttatgt gatgaagatc cgtaatttaa ctttcgatta gcagaaattt
     6001 cgaaaggtaa aatatccttg tcacattcgt ttgcaaagga aggtaaatct ttgccaaatc
     6061 agaggcgtct ctgatatgtt taactcccgt ttaacaacca tggagtatag ggcagtagcc
     6121 cgcagtatgg atcgtcaccg acgtcatttc agcatcaggc cttttaacgc ctgcctttct
     6181 ggcactctat gccgcacctt tcgtttgcat tttgtcgtta cgcctgcatt atttctggcg
     6241 tcgaatagct attccttaag caggagcttg tcatggaatt cttaatggac ccctcaattt
     6301 gggcggggct actcacgctt gttgttctcg aaattgtgct gggtatcgat aacctggtct
     6361 tcatcgccat tcttgctgac aaactgccgc caaaacaacg cgataaagcg cgtttgctgg
     6421 ggttatcact ggcgctgatt atgcgtctgg ggctgctgtc gctgatttca tggatggtca
     6481 cgctgaccaa accgctattt accgtcatgg atttctcctt ctccggacgc gacctgatta
     6541 tgttgttcgg ggggatattc ttgctgttca aagcaacaac cgaactgcat gaacggctgg
     6601 aaaaccgcga tcatgattcc ggccacggta aaggctacgc cagtttctgg gtggtcgtca
     6661 cacagattgt catccttgac gccgtcttct cgttggatgc ggtaattact gcagtaggga
     6721 tggttaacca tctgccggtg atgatggcgg cggtagtgat tgcgatggcg gttatgttgc
     6781 tggcatccaa accgctgacg cgattcgtta accagcaccc cacggtggtg gtgctctgtc
     6841 tgagcttcct gttaatgatt ggtcttagtc tggtggcaga aggtttcggt ttccacattc
     6901 cgaaaggtta cctgtatgcc gcgattggct tctcgatcat catcgaagtg tttaaccaga
     6961 ttgcgcgtcg caactttatt cgccaccagt cgactttgcc gctgcgagcg cgtactgccg
     7021 atgccatcct gcgtttgatg ggcgggaaac gtcaggccaa tgttcagcac gatgccgata
     7081 acccgatgcc gatcccggaa ggtgcatttg ccgaagaaga acgttacatg attaacggcg
     7141 tactgacgct ggcgtcgcgt tctctgcgcg ggatcatgac gccgcgcggt gaaataagct
     7201 gggttgacgc taatctcggg gtcgatgaaa tccgcgagca actgctctct tcaccgcaca
     7261 gtctgttccc ggtatgtcgc ggtgaactgg atgaaatcat cggtattgta cgtgctaaag
     7321 aactgctggt ggcgctggaa gagggcgttg atgtggcggc gattgcttcg gcgtctccgg
     7381 cgattatcgt cccggaaacc ctcgatccga tcaacctgtt gggcgtgctg cgtcgtgctc
     7441 gcgggagctt tgttatcgtg accaacgagt ttggtgtggt acaaggtctg gtcacgccgc
     7501 tggatgtgct ggaagccatt gcgggtgaat tcccggacgc tgacgaaacg ccggaaatca
     7561 ttactgatgg tgacggctgg ctggtaaaag gcggtacaga tttgcatgcc ttgcagcagg
     7621 ggcttgatgt tgagcacctt gccgatgacg atgatatcgc gacggtcgcg ggcctcgtga
     7681 tctcggcaaa tggtcacatt ccccgtgtgg gcgatgtgat tgatgtaggg ccactgcata
     7741 tcaccatcat tgaagccaat gattatcgtg ttgatctggt tcgcattgtt aaagagcaac
     7801 cggcgcacga tgaagatg
//
LOCUS       DADMJE010000175         7660 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.178, whole genome shotgun sequence.
ACCESSION   DADMJE010000175 DADMJE010000000
VERSION     DADMJE010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7660)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7660)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7660
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.178"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            380..988
                     /locus_tag="JN001_003562"
     CDS             380..988
                     /locus_tag="JN001_003562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HAY9054662.1"
                     /translation="MKLVGSYTSPFVRKLSILLLEKGITFEFINELPYNADNGVAQFN
                     PLGKVPVLVTEEGECWFDSPIIAEYIELMNVAPAMLPRDPLESLRVRKIEALADGIMD
                     AGLVSVREQARPAAQQSEDELLRQREKINRSLDVLEGYLVDGTLKTDTVNLATIAIAC
                     AVGYLNFRRVAPGWCVDRPHLVKLVENLFSHESFARTEPPKA"
     gene            1086..2477
                     /gene="selA"
                     /locus_tag="JN001_003563"
     CDS             1086..2477
                     /gene="selA"
                     /locus_tag="JN001_003563"
                     /EC_number="2.9.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-seryl-tRNA(Sec) selenium transferase"
                     /protein_id="HAY9054663.1"
                     /translation="MTTETRSLYSQLPAIDRLLHDSSFLSLRDTYGHTRVVELLRQML
                     DEAREVIRDSQTLPAWCENWAQEVDARLTKEAQSALRPVINLTGTVLHTNLGRALQAE
                     AAVEAVAQAMRSPVTLEYDLDDAGRGHRDRALAQLLCRITGAEDACIVNNNAAAVLLM
                     LAATASGKEVVVSRGELVEIGGAFRIPDVMRQAGCTLHEVGTTNRTHANDYRQAVNEN
                     TALLMKVHTSNYSIQGFTKAIDEAELVALGKELDVPVVTDLGSGSLVDLSQYGLPKEP
                     MPQELIAAGVSLVSFSGDKLLGGPQAGIIVGKKEMIARLQSHPLKRALRADKMTLAAL
                     EATLRLYLHPEALSEKLPTLRLLTRSAEVIQIQAQRLQAPLAAHYGAEFAVQVMPCLS
                     QIGSGSLPVDRLPSAALTFTPHDGRGSHLESLAARWRELPVPVIGRIYDGRLWLDLRC
                     LEDEQRFLEMLLK"
     gene            2474..4318
                     /gene="selB"
                     /locus_tag="JN001_003564"
     CDS             2474..4318
                     /gene="selB"
                     /locus_tag="JN001_003564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="selenocysteine-specific translation elongation
                     factor"
                     /protein_id="HAY9054664.1"
                     /translation="MIIATAGHVDHGKTTLLQAITGVNADRLPEEKKRGMTIDLGYAY
                     WPQPDGRVPSFIDVPGHEKFLSNMLAGVGGIDHALLVVACDDGVMAQTREHLAILQLT
                     GNPMLTVALTKADRVDEARVDEVERQVKEVLREYGFAEAKLFITAATEGRGIDALREH
                     LLQLPGREHASQHSFRLAIDRAFTVKGAGLVVTGTALSGEVKVGDSLWLTGVNKPMRV
                     RALHAQNQPTETAHAGQRIALNIAGDAEKEQINRGDWLLADAPPEPFTRVIVELQTHT
                     PLTQWQPLHIHHAASHVTGRVSLLEDNLAELVFDTPLWLADNDRLVLRDISARNTLAG
                     ARVVMLNPPRRGKRKPEYLQWLASLARAQNDSEALAVHLQRGAVNLPDFAWARQLNGE
                     GMRELLQQPGYIQAGYSLLNAPVAARWQRKILDTLATYHEQHRDEPGPGRERLRRMAL
                     PMEDEALVLLLIEKMRESGDILSHHGWLHLPDHKAGFSEEQQAIWQKAEPLFSDEPWW
                     VRDLAKETGTDEQAMRLTLSQAAQQGIITAIVKDRYYRNDRIVEFANMIRDLDQECGS
                     TCAADFRDRLGVGRKLAIQILEYFDRIGFTRRRGNDHLLRDALLFPEK"
     gene            4508..5659
                     /gene="yiaY"
                     /locus_tag="JN001_003565"
     CDS             4508..5659
                     /gene="yiaY"
                     /locus_tag="JN001_003565"
                     /EC_number="1.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonine dehydrogenase"
                     /protein_id="HAY9054665.1"
                     /translation="MASSTFFIPSVNVIGADSLTDAMNMMADYGFTRTLIVTDSMLTK
                     LGMAGDVQKALEERNIFSVIYDGTQPNPTTENVAAGLKLLKENNCDSVISLGGGSPHD
                     CAKGIALVAANGGDIRDYEGVDRSAKPQLPMIAINTTAGTASEMTRFCIITDEARHIK
                     MAIVDKHVTPLLSVNDSSLMIGMPKSLTAATGMDALTHAIEAYVSIAATPITDACALK
                     AVTMIAENLPLAVEDGSNAKAREAMAYAQFLAGMAFNNASLGYVHAMAYQLGGFYNLP
                     HGVCNAVLLPHVQVFNSKVAAARLRDCAAAMGVNVTGKNDAEGAEACINAIRELAKKV
                     DIPAGLRDLNVKEEDFAVLATNSLKDACGFTNPIQATHEEIVAIYRAAM"
     gene            5824..7362
                     /locus_tag="JN001_003566"
     CDS             5824..7362
                     /locus_tag="JN001_003566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001551836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY9054666.1"
                     /translation="MTNNPPSAQIKPGEYGFPLKLKARYDNFIGGEWVAPADGEYYQN
                     LTPVTGQLLCEVASSGKRDIDLALDAAHKVKDKWAHTSVQDRAAILFKIADRMEQNLE
                     LLATAETWDNGKPIRETSAADVPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP
                     LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEIVGDLLPPGV
                     VNVVNGAGGEIGEYLATSKRIAKVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNI
                     FFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIYERFMERAIRRVESI
                     RSGNPLDSVTQMGAQVSHGQLETILNYIDIGKKEGADVLTGGRRKLLEGELKDGYYLE
                     PTILFGQNNMRVFQEEIFGPVLAVTTFKTMEEALELANDTQYGLGAGVWSRNGNLAYK
                     MGRGIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMMLEHYQQTKCLLVSYSDKP
                     LGLF"
BASE COUNT         1814 a         1918 c         2136 g         1792 t
ORIGIN      
        1 ggattgaccg gatggccgga cgtcactccg ccggggcaca ccgaacaggc cacgccggtg
       61 ggggtaccaa tgcgcacccc ggctgaaccc tgaacaatgc taccgccata ctgcgtcatg
      121 tcgccctgac gcgctgccgg ttttccgctc atttctcatc cttgttttat cgggttattt
      181 gtctgctgac aggcaaaacc ctacagattt ataagaaagc ctgaagtgag atatccatca
      241 gagtgaaata attaggaaaa tatttatatc accatgataa atatgtgatt tatttggaag
      301 taacaaacca tcaacatttt ctgccctttt tcccatcacc aggccatact gatatttttc
      361 ctcgcacaaa ggactcggca tgaaactcgt cggtagctac accagcccgt ttgtacgcaa
      421 actttctatt ctgttgttag aaaagggcat aactttcgaa tttattaatg aactgcccta
      481 taacgcggac aacggcgtgg cgcaatttaa cccgttagga aaagtgccgg tgctggtgac
      541 cgaagagggc gaatgctggt ttgattcgcc gatcatcgct gaatatattg agttaatgaa
      601 tgtcgctccg gcgatgttgc cgcgcgatcc gctggagtcg ttgcgggtgc gcaaaattga
      661 ggcgctggcg gatggcatta tggatgccgg gctggtatcg gtgcgtgaac aggcgcgtcc
      721 ggcggcgcag cagtctgaag atgaattgtt acgccagcgg gagaaaatca accgcagtct
      781 ggatgtgctg gaaggatatc tggtcgatgg cacactcaaa accgatacgg tcaatctggc
      841 gactatcgcc attgcctgtg ctgtcggata tctcaatttc cgccgcgttg cgccaggttg
      901 gtgtgtcgac cgcccacact tagtcaaact ggtcgaaaac ctgtttagcc acgaaagttt
      961 tgctcgcacc gaaccgccaa aggcttgatg cgcgatatgt cctcctgacc catctcacgt
     1021 tacaatccgt ggttatgtta aacgcccttc tccatgtgag agggccttga ttagccaggt
     1081 ttcctatgac aaccgaaacg cgttccctct atagtcaact tccggctatt gatcgcttat
     1141 tgcacgatag ctccttcctt tctttgcgtg atacttatgg tcacacccgc gtggtggaat
     1201 tgttgcgtca gatgctcgac gaagcgcgag aagtgattcg tgacagccag acgcttcctg
     1261 cgtggtgtga aaactgggcg caagaagtcg atgcccggtt gacgaaagag gcgcagagcg
     1321 cgctgcgtcc ggtgatcaac ctgacgggaa ccgtgctgca taccaacctt ggacgagctt
     1381 tacaggcgga agccgcggtg gaagccgttg cgcaggctat gcgttcgcca gtgaccctcg
     1441 agtacgatct ggacgacgct ggacgcggac atcgcgatcg ggcgctggcg caactgctgt
     1501 gccgtattac gggggcggaa gatgcctgta tcgtcaataa caatgcggcg gcggtgttat
     1561 tgatgttggc ggccactgcc agcgggaaag aggtggtagt atctcgcggc gaattggtgg
     1621 agattggcgg cgcgtttcgt attcccgatg ttatgcgtca ggcaggctgc accctacacg
     1681 aagtagggac caccaaccgc acgcacgcga atgattatcg tcaggcggtg aatgaaaata
     1741 ccgcactgtt gatgaaagta cataccagta actacagcat tcaggggttc accaaagcga
     1801 tagatgaagc ggaactggtg gcgctcggca aagagctgga tgttcccgta gtgactgatt
     1861 taggcagtgg ctcgctggtc gatcttagcc agtacggttt gccgaaagag ccaatgccgc
     1921 aggagttgat tgcggcgggc gtcagtctgg tgagcttctc cggcgacaag ttgttaggcg
     1981 ggccgcaggc agggattatc gttggtaaaa aagagatgat cgcccgcctg caaagccacc
     2041 cgctgaagcg tgcattacgc gcggataaaa tgaccctcgc ggcgctggaa gccacgttgc
     2101 gtctttattt acaccctgaa gctctgagtg aaaaattacc gaccctgcgc ctgcttaccc
     2161 gcagcgcaga ggtcattcaa atccaggcac aacgtttaca ggctcccctt gccgcacatt
     2221 acggcgcgga gtttgcggta caggttatgc catgtctttc gcagattggc agtggttcgc
     2281 tgccggttga tcgcctgccg agcgcggcat taacgtttac accccatgat ggacgcggta
     2341 gccaccttga gtcattagcc gcccgctggc gtgaattgcc agtgccggtg attggtcgta
     2401 tttatgacgg acgattgtgg ctggatttac gctgccttga agatgagcaa cggtttttgg
     2461 agatgttgtt gaaatgatta ttgcgactgc cggacacgtt gaccacggca aaacaacctt
     2521 attgcaggcg attactggcg taaatgctga ccgtctgccg gaagaaaaaa agcgcggcat
     2581 gaccatcgat ctcggctatg cctactggcc gcagccggat ggtcgcgtgc ctagttttat
     2641 cgacgtaccc ggtcatgaaa agtttctttc caacatgctg gcgggcgttg gtggtatcga
     2701 tcacgcgctg ttggtggtgg cgtgcgatga cggcgtgatg gcgcagaccc gtgagcatct
     2761 ggcgattttg cagctgaccg gtaacccgat gctgacagtg gcgctgacca aggccgatcg
     2821 cgtggacgaa gcgcgtgttg atgaggttga acgccaggta aaggaggtgc tgcgggaata
     2881 cggttttgct gaggcaaaac tgtttatcac cgcagcaacc gaaggtcggg gaattgatgc
     2941 cctgcgcgag catctgcttc agttaccagg acgtgaacac gccagccaac atagtttccg
     3001 cctcgcgatc gaccgcgcat ttaccgtaaa aggtgccggg ctggtcgtca ccggtacggc
     3061 gttaagcggg gaagtgaagg taggcgattc actctggctg actggtgtaa ataaaccgat
     3121 gcgtgtacgt gcgctgcatg cacaaaacca gccaacagaa accgcccatg ccgggcagcg
     3181 tatcgcgctt aacatcgcgg gtgatgcgga aaaagagcag attaaccgtg gcgactggct
     3241 gcttgccgat gcgccgccag agccgttcac acgggtgatt gtcgagcttc aaacccatac
     3301 accgctgacc cagtggcagc cgctgcatat tcaccacgcc gccagccacg tcacgggacg
     3361 cgtttcactg ctggaagata accttgctga actggtcttc gacaccccgt tatggctggc
     3421 agataacgac cgcctggtat tgcgcgatat ctctgcccgc aacacgctgg ccggagcgcg
     3481 cgtcgtgatg cttaacccgc cgcgtcgcgg taaacgtaaa ccagagtatc tgcaatggct
     3541 ggcttccctc gccagggcac agaatgatag cgaagcgtta gccgttcacc tgcaacgcgg
     3601 cgcggttaat cttcctgatt tcgcctgggc gcgccagctc aacggcgaag ggatgcgcga
     3661 actgctgcaa cagcctggct atattcaggc tggttatagc ttgttgaatg cgccggttgc
     3721 cgctcgctgg caacggaaaa ttctcgacac attagcgact tatcatgagc aacatcgcga
     3781 tgaacctggg cctgggcgcg aacgtctgcg acgtatggcg ttgccaatgg aagatgaagc
     3841 gctagtactg ttgctgattg aaaagatgcg cgaaagcggc gacatcctca gtcatcacgg
     3901 ttggctgcat ctgccggatc acaaagcggg cttcagcgaa gagcagcagg ccatctggca
     3961 aaaagcagag ccgctgttta gtgacgagcc gtggtgggtg cgtgatctgg caaaagagac
     4021 gggtaccgac gagcaggcaa tgcgcttgac gctaagccag gcggcgcagc aaggaataat
     4081 taccgcgatc gtcaaagatc gttattaccg taacgatcgg attgtcgaat ttgccaatat
     4141 gatccgcgat ctcgatcagg agtgtggttc aacctgcgcg gcggatttcc gcgatcgctt
     4201 aggcgtaggc cgaaagctgg caattcagat tctggaatat tttgaccgca ttggctttac
     4261 gcgtcgtcgt ggaaatgatc atttattgcg cgacgcatta ttatttccgg aaaaataagg
     4321 aaatgattaa ttaattttta aaataaatta atacaaattt cttatgattt taaaaaaagc
     4381 acattgttta atgaatacaa tgtgcttttt attagattaa ttttgataat taataataat
     4441 gatcatgttt tcgaatgaaa atcctcagta agcttcccac ccttttttac actttcagga
     4501 gtgtgttatg gcatcttcaa ctttctttat tccttctgtg aatgtcatcg gcgctgattc
     4561 attgactgat gcaatgaata tgatggcaga ttatggattt acccgtacct taattgtcac
     4621 tgacagtatg ttaacgaaat taggtatggc gggcgatgtg caaaaagcac tggaagaacg
     4681 caatattttt agcgttattt atgatggcac ccaacctaac cccaccacgg aaaacgtcgc
     4741 cgcaggtttg aaattactta aagagaataa ttgcgatagc gtgatctcct taggcggtgg
     4801 ttctccacac gactgcgcaa aaggtattgc gctggtggca gccaatggcg gcgatattcg
     4861 cgattacgaa ggcgttgacc gctctgcaaa accgcagctg ccgatgatcg ccatcaacac
     4921 cactgcgggt acggcctctg aaatgacccg tttctgcatc atcactgacg aagcgcgtca
     4981 tatcaaaatg gcgattgttg ataaacatgt cactccgctg ctttctgtca atgactcctc
     5041 tctgatgatt ggtatgccga agtcactgac cgccgcaacg ggtatggatg ccttaacgca
     5101 cgctatcgaa gcatatgttt ctattgccgc cacgccgatc actgacgctt gtgcactgaa
     5161 agccgtgacc atgattgccg aaaacctgcc gttagccgtt gaagatggca gtaatgcgaa
     5221 agcgcgtgaa gcaatggctt atgcccagtt ccttgccggt atggcgttca ataatgcttc
     5281 tctgggttat gttcatgcga tggcgtacca gctgggcggt ttctacaacc tgccacacgg
     5341 tgtatgtaac gccgttctgc tgccccatgt tcaggtattc aacagcaaag tcgccgctgc
     5401 acgtctgcgt gactgtgccg ctgcaatggg cgtgaacgtg acaggtaaaa acgacgcgga
     5461 aggtgctgaa gcctgcatta acgccatccg tgaactggcg aagaaagtgg atatcccggc
     5521 aggcctacgc gacctgaacg tgaaagaaga agatttcgcg gttctggcga ctaattccct
     5581 gaaagatgcc tgtggtttta ctaacccgat ccaggcaact cacgaagaaa ttgtggcgat
     5641 ttatcgcgca gcgatgtaat catcatttcc acaacggctg gcaaattgtc agccgctttt
     5701 tcaactatct ctgtaaccct tgcccgtaaa ttcgtgatag ccgtcgtaaa gctgttaccg
     5761 actggcgaag atttcgccag tcacgtctac ccttgttata cctcacaccg caaggagacg
     5821 atcatgacca ataatccccc ttcagcacag attaagcccg gcgagtatgg tttccccctc
     5881 aagttaaaag cccgctatga caactttatt ggcggcgaat gggtagcccc tgccgatggt
     5941 gagtattacc agaacctgac gccggtgact gggcagctgc tgtgcgaagt ggcgtcttcg
     6001 ggcaaacgag acatcgatct ggcgctagat gctgcgcaca aagtgaaaga taaatgggcg
     6061 cacacctcgg tgcaggatcg cgcggcgatt ctgtttaaga ttgccgatcg aatggaacaa
     6121 aacctcgagc tgttagcgac agctgaaacc tgggataacg gcaaacccat tcgcgaaacc
     6181 agtgctgccg acgtgccgct ggcgattgat cattttcgct atttcgcctc gtgtattcgg
     6241 gcgcaggaag gtgggatcag tgaagttgat agcgaaaccg tggcctatca tttccatgaa
     6301 ccgttaggcg tggtggggca gattatcccg tggaacttcc cgctgctgat ggcgagctgg
     6361 aaaatggctc ccgcgctggc ggcgggcaac tgtgtggtgc tgaaacccgc acgtcttacc
     6421 ccgctttctg tactgctgct aatggaaatt gtcggtgatt tactgccgcc gggcgtggtg
     6481 aacgtggtca atggcgcagg tggggaaatt ggcgaatatc tggcgacctc gaaacgcatc
     6541 gccaaagtgg cgtttaccgg ctcaacggaa gtgggccaac aaattatgca atacgcaacg
     6601 caaaacatta ttccggtgac gctggagttg ggcggtaagt cgccaaatat cttctttgct
     6661 gatgtgatgg atgaagaaga tgcctttttc gataaagcgc tggaaggctt tgcactgttt
     6721 gcctttaacc agggcgaagt ttgcacctgt ccgagtcgtg ctttagtgca ggaatctatc
     6781 tacgaacgct ttatggaacg cgccatccgc cgtgtcgaaa gcattcgtag cggtaacccg
     6841 ctcgacagcg tgacgcaaat gggcgcgcag gtttctcacg ggcaactgga aaccatcctc
     6901 aactacattg atatcggtaa aaaagagggc gctgacgtgc tcacaggcgg gcggcgcaag
     6961 ctgctggaag gtgaactgaa agacggctac tacctcgaac cgacgattct gtttggtcag
     7021 aacaatatgc gggtgttcca ggaggagatt tttggcccgg tgctggcggt gaccaccttc
     7081 aaaacgatgg aagaagcgct ggagctggcg aacgatacgc aatatggcct gggcgcgggc
     7141 gtctggagcc gcaacggtaa tctggcctat aagatggggc gcggcataca ggctgggcgc
     7201 gtgtggacca actgttatca cgcttacccg gcacatgcgg cgtttggtgg ctacaaacaa
     7261 tcaggtatcg gtcgcgaaac ccacaagatg atgctggagc attaccagca aaccaagtgc
     7321 ctgctggtga gctactcgga taaaccgttg gggctgttct gatataagaa gctggtcgca
     7381 ttgggtattc attgcctgat gtgacgctta cgcgtcttat catgcctacg ggaacctgac
     7441 cgtaggccgg ataaggcgta cacgccgcat ccggcataaa caaagcgcac gttgttacaa
     7501 tttacgtttt aaacctacgt gcgcaataat ccagactacg ccaacagaag tgcgtttctg
     7561 gggcgtgttt tgtcaggagt ttaatctcgc gtttcgatgg tgagcgggcg aactaggccg
     7621 taaatcacca ttggtgatcc gaggccaatc agcaataaac
//
LOCUS       DADMJE010000176         7640 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.179, whole genome shotgun sequence.
ACCESSION   DADMJE010000176 DADMJE010000000
VERSION     DADMJE010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7640)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7640)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7640
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.179"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            565..3978
                     /locus_tag="JN001_003567"
     CDS             565..3978
                     /locus_tag="JN001_003567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000438152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HAY9054667.1"
                     /translation="MEQSLNFEMLRSQWPELAELACMAERYVHSDPESCLVKLRNYTE
                     LMVRWLYRQERLPEGIKANLYDLMNADVFTSMMPEAIIMKMDALRIHGNRAAHGGRIK
                     AKDTYWLLKEAYLLGIWLYVRYAHGNVDDCPKFTLPPLTQSSGRADEKRLEDAIKAQD
                     ESRERELALQRALQQEQEKAEHLTQRLNEARARNQHVADILSIDEAETRRRLIDSRLL
                     AADWNVGEELKNTDQVTQEHPVKEQPTTSGDGYADYVLWDEAHKPLAVVEAKKTSVNA
                     EQGRIQARLYADWLEKEYGQRPVIFYTNGYDIWLWDDHKTHGYPPRRVFGFYSKESLQ
                     YLIQQRETRLPLNRVPHVKDNEGKAVAGRLYQLETIARVSERFTNKYRQSLIVQATGT
                     GKTRVAIALSKLMIDARWVKRVLFLCDRKELRKQAANAFNQFTNEPLYVVGKSKKADR
                     QNARIYIATYPGMMKIMDHFDVGYFDLIIADESHRSIYNVYGDLFKYFDALQIGLTAT
                     PIDMVSKTTFGLFGCEGRIPTANYSLEDAIADNNLVPYEVVTHTTEFLREGIKREKLS
                     DAQIRELEEQGIDPNTLEFDGKALDEAIYNKDTNRYILRNLMENGLKDRDGQLPGKTI
                     IFARNHKHALLLNELFDDMYPQFAGRFCQVIDNYDPRAEQLIDDFKGLDESTNKELTI
                     AISVDMLDTGIDVPEIVNLVFAKPVKSKVKFWQMIGRGTRLCPGLYGYDDNGKPLDKQ
                     KFRIFDHWGNFEYHELHTEEAEVTATKSLAQKRFEAWVMLGAAAQRKFDKQAVDLVAH
                     QLREQINALDEKSIAVQEKWQQKAQYSDEKVLRQLSPKTQQDLLSVLAPLMQWLDVRG
                     QSDAIRFDMDILAAQTARYTNPEELDVLWPIIVEKVERLPPHLAQVQQQGQRINQLRN
                     LSWWKQASLEELEDIRIHLRGIMHLMEKDATPKFGSIQVDITEDANLIQTETRKTNIR
                     SIDFKLYRQQVQGALEPLFQQNPVLKKIRNGEPVTQNELDELAKLVLIQNPNVDIRAL
                     KEFYPQATASLDKLLRTIIGMDSDAVEVRFAQFAADNSLTSQQLRFLSLLKNHIRDYG
                     TIEMRQLFEQPFTHIHNEGVTGVFPDIAQIARLQKIVEELGVVTDAATV"
     gene            4042..5676
                     /locus_tag="JN001_003568"
     CDS             4042..5676
                     /locus_tag="JN001_003568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-6 DNA methylase"
                     /protein_id="HAY9054668.1"
                     /translation="MITGDLKSKIDGLWEDFWVGGITNPLTVIEQITYLMYSRMLDTQ
                     EQRDEKRKQIAGIDFKPRFAPEQQEFRFSHYSNLGSDEMMEVVRDGVFQHFRQLGQAD
                     ASKVTLLGNFMKDARLEIVKPSLLTKAVEVIKNLPLDRGDTKGDLYEYLLSKLTTAGI
                     NGQFRTPRHIIRTMVEMMEPNPARGETICDPACGTGGFLATSYEYLLEKYSSLESIHT
                     EIGTNERGELEEQKIFTGDLLTPWRNHVDNNMFHGYDFDTTMLRIAAMNLIMHGVDAP
                     DIHYQDTMSQSFSTNFPQASKNAFNLILANPPFTGSLDEEDIDSTLSAMVKTKKTELL
                     FLARILQMLKVGGRSATIVPQGVLFGSSKAHQSLRKTLVEDNQLETVINLPSGVFKPY
                     AGVATAILIFTKGGQTDEVWFYDLQNDGYSLDDKRNPIKDNDLPHLLASWKHYRTLRG
                     LPVDNFMGKKLASLLKQQYPEGINAGVDFKDRTQAAFVVPKADIAAQKYDLSINRYKE
                     VVYQAEEYEDPKVILKRLKDLEKEILADLDELEGML"
     gene            5685..6755
                     /locus_tag="JN001_003569"
     CDS             5685..6755
                     /locus_tag="JN001_003569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001438891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="restriction endonuclease subunit S"
                     /protein_id="HAY9054669.1"
                     /translation="MVKLGDVINVHYGKALKADQRVSNGSVHVFGSSGIVGNHDKTLC
                     SYPTIIIGRKGSVGAITWAPSGGWIIDTAYYVEIKDNNKLDLRYLFYILSGIDLTKKT
                     ITTSIPGLNRDDLYDTFIKLPPFEEQKRIVDLLDKAEGIRQKREQSIKLADDFLRATF
                     ATMYGNPITNPKKWPVHLMGEIIEFKGGNQPPKSDFIFEPKQGYIRLVQIRDFKSDKY
                     ATYIPQEKAKRIFEVDDVMIARYGPPVFQILRGLSGSYNVALMKASPKENIRKGFIFY
                     LLQLPEYHDVVVKNSERTAGQTGVNLELLNKFNVPLPPIYYQDEILDRLARIEKFKEK
                     IEISLNHLEIQFLSLQKRLIGF"
     gene            complement(6880..7596)
                     /locus_tag="JN001_003570"
     CDS             complement(6880..7596)
                     /locus_tag="JN001_003570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054670.1"
                     /translation="MLSETKKRIPAHLFRMIKDELYELVLTDDPKGKLYVRDSEKIEE
                     GVSTTEFVVGYGAISMVKKSESMATKGLVGLERVDLIREVVFENGYYDWGCVVNDVLP
                     NICKGNARIPIFHFLNHAKLINPDGSIINETELSGGVLSRLNITPISFQSQGWDKRRS
                     ETVPEVKVGVNELYLAYDFSFFLRMMPYMEPGLIKRDMGELLKILKKHIDEAMNTQVL
                     SSNFCKLVCIYDYIKNSHRY"
BASE COUNT         2222 a         1740 c         1791 g         1887 t
ORIGIN      
        1 tcctgttctc ccaaatatca tggtattgat acgggagatt atgccgtaca ggtacgacac
       61 gttatgtcgt gccaaagggg agtggataga aaaaatggcg aagatgcgaa aagttgatta
      121 atgcattgaa aaaaaatgaa ttaataatga acttgggtaa aagcgccatc aaaatacgac
      181 acgacctgtc gtattttgtg ttagccggga aaagatatct gctacttact aaaatgattt
      241 agtgctgaaa atatttataa gccaataaat agacaggtat tacggagtaa cgcccaggct
      301 attttaacga gcctgctgtt ttattggctc aaaaaacata tcccatagat gatcagccat
      361 acccgcgtta gtgagcaagg tatcccttga gtagccaggg ctgaagacgc ccattgatgg
      421 gcgaaaacca aggttctggc cgttaaagcg gctatgtcgt taaacacatc accaccatat
      481 gccatccggc tcacttcgtc ggccaaatta gtgtgatatt ctttccagaa tttctgttgt
      541 atccacaaca taaggcgatg attgatggag cagtctctca attttgaaat gttgcgcagc
      601 cagtggccgg aactggcaga actcgcatgt atggcagagc gctatgttca ctccgatccg
      661 gaaagctgcc tggttaagct gcgcaactac accgaattga tggtgcgctg gttgtatcgt
      721 caggagcggt tgccggaagg tattaaggct aatctttacg atttaatgaa cgctgatgtc
      781 tttaccagca tgatgccgga agccatcatc atgaaaatgg atgcgctgcg tatccatggc
      841 aaccgtgccg cgcacggcgg acgtatcaaa gctaaagata cttactggct gctcaaagaa
      901 gcgtatttgt tgggaatttg gctgtatgtt cgctacgccc acggtaatgt tgatgactgc
      961 cccaaattta cactccctcc attaacacaa tcttcaggtc gtgcagatga aaaacgtctg
     1021 gaagatgcaa tcaaggctca ggatgaaagc cgtgagcgcg aactggcgct acaacgcgca
     1081 ctacagcaag aacaggaaaa ggccgaacac ctcactcaac gcctgaatga agccagagcg
     1141 cgtaaccagc atgttgccga tattctctct attgatgaag cggaaacccg ccgtcgcctg
     1201 attgactctc gcttacttgc agccgactgg aatgtagggg aagaacttaa aaacacggat
     1261 caagtcacac aagaacatcc agtcaaagag caacccacca cctctggtga cggttatgca
     1321 gactatgtct tgtgggatga ggcacacaaa ccgttggcgg tggtggaagc aaaaaaaacc
     1381 agcgtcaatg ccgagcaagg acgaattcag gcccggctgt atgcagactg gctggaaaaa
     1441 gaatacggtc agcgtccggt catcttctac accaacggct atgatatctg gctgtgggat
     1501 gaccataaaa ctcatggtta tcccccgcgt cgggtgtttg gcttctacag caaggaaagc
     1561 ctgcaatatc ttattcagca gcgtgaaacc cgtctgccgc tgaacagagt gccacacgta
     1621 aaagataacg aaggtaaggc cgttgccgga cgtttgtacc agctcgaaac cattgcccgc
     1681 gtcagtgaac ggtttaccaa caagtaccga caatcgttaa ttgttcaggc tacgggtaca
     1741 ggcaaaaccc gcgtggcaat tgcactaagc aaactgatga ttgatgcccg ctgggtaaaa
     1801 cgcgtcctgt ttctttgcga ccgtaaagaa ctgcgtaaac aggcggcaaa tgcctttaat
     1861 caattcacca atgagccgct gtatgtggtc gggaaatcga aaaaagcaga caggcagaat
     1921 gccagaatct acatcgctac ctatcccggt atgatgaaaa tcatggacca tttcgatgtc
     1981 ggttatttcg atttgatcat cgccgatgaa tcccaccgct ctatctacaa cgtctacggc
     2041 gatctgttta agtattttga tgccctccag attggcctga cggccacgcc aattgacatg
     2101 gtgagtaaaa ccactttcgg cctgtttggt tgtgaaggac gtattcctac cgccaactac
     2161 agcctggaag atgccatcgc cgataacaat ctggttccct atgaggttgt cacacacaca
     2221 acagaattcc tgcgcgaagg tatcaaacgg gagaaattaa gcgacgcaca aatccgcgag
     2281 ctggaagaac aaggcataga tcccaatacg ctggagtttg atggcaaggc gctggatgag
     2341 gcgatctaca acaaagacac caaccgctat atcctgcgta acctgatgga aaatggcctg
     2401 aaagatcggg acggccagtt gcctggtaaa accatcattt tcgcccgtaa ccacaaacac
     2461 gcgctgctgt tgaatgaatt gttcgacgat atgtacccac agtttgccgg gcgcttctgc
     2521 caggtcatcg acaactacga tccccgcgcc gagcaactga ttgatgattt taaagggctg
     2581 gatgaaagca ccaacaaaga gctgaccatc gctatctccg ttgacatgct cgataccggt
     2641 attgatgtcc cggaaattgt gaatctggtc tttgccaaac cggtcaaatc aaaagtgaag
     2701 ttctggcaga tgattggccg tggtacgcgc ctctgtccgg ggttgtacgg ttacgacgat
     2761 aacggcaaac cgctggataa acagaaattc cgcattttcg atcactgggg caattttgag
     2821 tatcacgagc tgcataccga agaggcggaa gtcacagcga caaaatcgct tgcgcaaaaa
     2881 cgcttcgaag cgtgggttat gctgggggcc gctgcgcagc gtaaattcga caaacaggcg
     2941 gtggatttag ttgctcacca gcttcgcgag caaatcaacg cactggatga aaagtcgatt
     3001 gccgtacagg aaaaatggca gcagaaagcg cagtacagtg atgaaaaggt gctgcgccag
     3061 ctttctccga aaacacagca ggatctgcta tctgttctgg ccccgttgat gcagtggctg
     3121 gacgtgcgcg ggcaaagcga tgccatacgc tttgatatgg atattctggc ggcgcaaact
     3181 gcccgttata ccaacccgga agagctggat gttctctggc cgatcatcgt cgaaaaagtg
     3241 gagcgcctgc cgccgcattt ggcgcaggtg cagcaacagg gacaacgaat caatcagctt
     3301 cgtaatttaa gctggtggaa gcaggccagc ctggaagagc tggaggatat tcgcattcat
     3361 ttgcgcggta tcatgcacct gatggaaaaa gacgcgacgc ctaaatttgg ttcgatacag
     3421 gtggatatta ccgaagatgc gaacctgatc cagacggaga cccgcaaaac taatatccgc
     3481 tcgattgatt tcaaactcta tcgccagcag gttcaggggg cgctggagcc gctgttccag
     3541 caaaacccgg ttctgaagaa aatccgcaac ggcgagccag tcacgcaaaa cgagctggat
     3601 gagctggcga agctggtgct gatccagaac cccaacgttg atattcgtgc gttgaaagag
     3661 ttttatccgc aggcaaccgc cagcctggat aaacttttgc gtaccatcat cgggatggac
     3721 agcgacgcgg tggaagtgcg ttttgcccag ttcgccgctg ataacagcct gaccagccaa
     3781 caactgcgct tcctgtcatt gctgaaaaac cacattcgcg attacggcac cattgaaatg
     3841 cggcagctct ttgaacagcc ttttacgcat atccacaacg aaggcgttac cggtgtgttc
     3901 cctgatatag cgcaaatcgc ccgcctgcaa aagatagtcg aagagctggg tgttgtgacc
     3961 gacgcagcga cggtataata cacgcatgac aagccccggc agcggggctt ttgtatttaa
     4021 aacaggatat aaacgctaac aatgattact ggcgacttaa aaagtaaaat cgacggacta
     4081 tgggaagatt tctgggtggg tggtatcacc aacccgctga ccgtaatcga acagatcacc
     4141 tatctgatgt attcccggat gctggatacc caggaacaac gcgacgaaaa gcgtaaacaa
     4201 atcgcgggta ttgattttaa accgcgtttt gcgccagaac agcaggagtt ccgtttcagt
     4261 cactatagca accttggctc ggatgagatg atggaagtgg tgcgcgatgg cgtattccag
     4321 catttccgtc agctcggcca ggccgatgct tcgaaggtga cgctgctggg caactttatg
     4381 aaagatgctc gtctggagat tgttaagccg tcattgctga ccaaagcggt tgaggtaatc
     4441 aaaaacctgc cattggatcg cggcgacacc aaaggcgacc tttacgaata cctgttaagc
     4501 aagctgacaa ctgccggaat caacggacag ttccgcacac cgcgccacat tatccgcacg
     4561 atggttgaaa tgatggagcc gaacccggcc cgcggcgaga cgatttgcga tcccgcctgt
     4621 ggcaccggtg gttttctggc aaccagctat gaatatctgc tggagaagta cagctcgctg
     4681 gaatccattc atactgagat tggcaccaac gaacgtggcg agctggaaga gcaaaaaatc
     4741 tttaccggcg atctgctgac accgtggcgt aaccatgtgg ataacaacat gttccacggt
     4801 tacgactttg acaccacaat gctacgtatc gccgccatga acctgattat gcacggcgtg
     4861 gatgcgcctg atatccacta tcaggacaca atgagccaga gtttcagcac aaacttcccg
     4921 caggccagta aaaacgcctt caacctgatt ctggcgaacc cgccgtttac cggttcactg
     4981 gacgaggaag atatcgactc cacgctgtcg gcaatggtga aaaccaaaaa aaccgaacta
     5041 ctgttcctgg cgcgtattct gcaaatgctg aaagtgggcg ggcgcagtgc cactatcgtg
     5101 ccgcagggcg tgctgtttgg ctctagcaag gcgcaccagt cacttcgcaa aacgctggtg
     5161 gaagataacc aactggaaac ggtgatcaat ctgccttctg gtgtatttaa accttacgct
     5221 ggcgtggcga cggcgatcct gatctttacc aaaggcggtc aaacggatga ggtctggttc
     5281 tacgatctac aaaatgacgg ctacagcctg gatgataagc gcaacccgat aaaagacaac
     5341 gatctgccgc atctgctggc aagctggaag cattaccgta ctttacgcgg gctaccggtt
     5401 gataacttta tgggtaagaa gttagcctcg ttgcttaaac agcagtaccc ggaagggatt
     5461 aatgctggcg ttgattttaa agatcgcacg caggcggcgt ttgttgtacc gaaagcggat
     5521 attgctgcgc agaaatacga tctatccatc aaccgttata aagaagtcgt gtatcaggcg
     5581 gaggaatatg aagatccgaa ggtgatattg aagcggttaa aggatctgga aaaagagatt
     5641 ctggcggatt tggatgagct ggaggggatg ctgtgagttc ggcgatggtg aagttagggg
     5701 atgttattaa tgttcactac ggaaaagcat taaaagctga tcagcgtgta tcgaatggaa
     5761 gtgtccatgt gtttggtagt tcaggaattg tcggcaacca cgataaaacg ctttgcagct
     5821 atcccacgat aattattggc cgcaaaggca gcgttggtgc tattacctgg gctccaagcg
     5881 gaggctggat cattgatact gcttattacg ttgagatcaa agataataat aagttagatc
     5941 tccgatactt gttttatatt ctgagcggaa ttgatctcac taagaaaacg attaccacaa
     6001 gtattcctgg attaaataga gacgatctct atgatacatt tattaaatta ccaccttttg
     6061 aagagcagaa acgaattgtg gatcttctcg ataaagctga gggtatacgc caaaaacgtg
     6121 agcaatccat caaactggct gatgattttt tgcgtgctac gtttgctaca atgtatggga
     6181 atcctattac aaaccccaaa aaatggcctg tccatcttat gggagaaatt attgaattta
     6241 aaggtggaaa tcaaccacct aaaagtgatt ttatttttga acctaaacag ggttatatta
     6301 gattagtaca aattagagat tttaaatccg ataaatatgc gacgtacatt ccgcaagaaa
     6361 aagcaaaacg tattttcgaa gttgatgatg ttatgattgc tcgttatggg ccacctgtgt
     6421 ttcaaatact tagaggttta tccggcagct acaatgtagc tttaatgaaa gcttcaccca
     6481 aagaaaatat taggaagggg tttatattct atcttctaca acttccggaa tatcatgatg
     6541 ttgttgtaaa aaactctgaa agaacagcag gacaaaccgg tgtaaatctt gaactattaa
     6601 acaaattcaa tgttcccctc ccacctatat actatcaaga tgagatatta gatagattag
     6661 ctagaattga aaaatttaaa gaaaaaatag aaatatcatt aaatcattta gaaatacaat
     6721 ttttatcact acagaagaga ttaataggtt tttaaatcct tagtatcgaa ataaacatta
     6781 atttattata ttaaattaag atattttagg aaattaaggc gtcactctta ggtaacgcct
     6841 ttttttacta tctcgccccc taagaaggtt atatcttact taatacctgt gactattttt
     6901 gatataatca taaatacaca ctaatttgca aaaattactt gacaacacct gagtattcat
     6961 agcttcatct atatgttttt tcaatatttt gagaagctct cccatatcgc gcttgattaa
     7021 tccaggctcc atataaggca tcattcttaa aaagaaactg aaatcataag caagatataa
     7081 ctcattgacc cccaccttga cctcaggaac ggtttcagag cgtcgtttat cccatccttg
     7141 agactgaaaa ctaataggag tgatatttaa tcgtgataaa acgccacctg agagttctgt
     7201 ttcattaatt atactcccat caggattaat taatttagcg tgatttaaga agtgaaaaat
     7261 aggaatgcgc gcattgcctt tgcatatatt tggcaaaaca tcattaacaa cacatcccca
     7321 atcataatat ccattttcaa atacaacctc tcggatgaga tctacacgct ccagtccaac
     7381 caatccttta gttgccatcg attccgattt ttttaccatc gaaatagcac catatcccac
     7441 aacaaactca gttgtactga ccccttcttc aattttctct gaatccctca catataattt
     7501 tcctttcgga tcatcagtta agaccaactc ataaagttca tcttttatca ttcggaataa
     7561 atgtgctgga atcctttttt tagtttcact cagcacctca aatatttctt tataggatgg
     7621 tgcctgaaca tattttaccg
//
LOCUS       DADMJE010000177         7606 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.180, whole genome shotgun sequence.
ACCESSION   DADMJE010000177 DADMJE010000000
VERSION     DADMJE010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7606
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.180"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..243)
                     /locus_tag="JN001_003571"
                     /pseudo
     CDS             complement(1..243)
                     /locus_tag="JN001_003571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            195..1232
                     /locus_tag="JN001_003572"
     CDS             195..1232
                     /locus_tag="JN001_003572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001363149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="conjugal transfer protein TraF"
                     /protein_id="HAY9054671.1"
                     /translation="MHRGFCVAHEPSILLPSVGAQLSNPDNITDNADRISDEWKAFDR
                     AIESNHGVPEAAARLKEHLRDFRNTHAAAQLGVSAVAALPGDRLSAALMVKSHGTVSV
                     DGKVSDADLTYLEEVANSTGQEVDKSRLTSQAFARAALITDVGIALATELETAGQKWS
                     LGFPPKFQRVDLFNYNVLVRNYDSSAFKGDRYHNTKNGINADIGASTNLDDNWTLGLV
                     AQNLIPRSIETKEVNGITETFRIRPQVTAGVSWHNAMFTTAFDVDLTPASGFTSDSNR
                     QFAAIGAEFNAWKWAQLRAGYRQNLAGNDGSAFTAGVGISPFDVVHLDVAGLIGTDNT
                     YGAVAQFQFTF"
     gene            1593..5450
                     /gene="sigA"
                     /locus_tag="JN001_003573"
     CDS             1593..5450
                     /gene="sigA"
                     /locus_tag="JN001_003573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease autotransporter toxin SigA"
                     /protein_id="HAY9054672.1"
                     /translation="MNKIYSLKYSHITGGLVAVSELTRKVSVGTSRKKVILGIILSSI
                     YGSYGETAFAAMLDINNIWTRDYLDLAQNRGEFRPGATNVQLMMKDGKIFHFPELPVP
                     DFSAVSNKGATTSIGGAYSVTATHNGTQHHAITTQSWDQTAYKASNRVSSGDFSVHRL
                     NKFVVETTGVTESADFSLSPEDAMKRYGVNYNGKEQIIGFRAGAGTTSTILNGKQYLF
                     GQNYNPDLLSASLFNLDWKNKSYIYTNRTPFKNSPIFGDSGSGSYLYDKEQQKWVFHG
                     VTSTVGFISSTNIAWTNYSLFNNILVNNLKKNFTNTMQLDGKKQELSSIIKDKDLSVS
                     GGGELTLKQDTDLGIGGLIFDKNQTYKVYGKDKSYKGAGIDIDNNTTVEWNVKGVAGD
                     NLHKIGSGTLDVKIAQGNNLKIGNGTVILSAEKAFNKIYMAGGKGTVKINAKDALSES
                     GNGEIYFTRNGGTLDLNGYDQSFQKIAATDAGTTVTNSNVKQSTLSLTNTDAYMYHGN
                     VSGNISINHIINTTQQHNNNANLIFDGSVDIKNDISVRNAQLTLQGHATEHAIFKEGN
                     NNCPIPFLCQKDYSAAIKDQESTVNKRYNTEYKSNNQIASFSQPDWESRKFNFRKLNL
                     ENATLSIGRDANVKGHIEAKNSQIVLGNKTAYIDMFSGRNITGEGFGFRQQLRSGDSA
                     GESSFNGSLSAQNSKITVGDKSTVTMTGALSLINTDLIINKGATVTAQGKMYVDKAIE
                     LAGTLTLTGTPTENNKYSPAIYMSDGYNMTEDGATLKAQNYAWVNGNIKSDKKASILF
                     GVDQYKEDNLDKTTHTPLATGLLGGFDTSYTGGIDAPAASASMYNTLWRVNGQSALQS
                     LKTRDSLLLFSNIENSGFHTVTVNTLDATNTAVIMRADLSQSVNQSDKLIVKNQLTGS
                     NNSLSVDIQKVGNNNSGLNVDLITAPKGSNKEIFKASTQAIGFSNISPVISTKEDQEH
                     TTWTLTGYKVAENTASSSAAKSYMSGNYKAFLTEVNNLNKRMGDLRDTNGEVGAWARI
                     MSGAGSASGGYSDNYTHVQIGVDKKHELDGLDLFTGLTMTYTDSHASSNAFSGKTKSV
                     GAGLYASAIFDSGAYIDLISKYVHHDNEYSATFAGLGTKDYSSHSLYVGAEAGYRYHV
                     TEDSWIEPQAELVYGAVSGKRFDWQDRGMSVTMKDKDFNPLIGRTGVDVGKSFSGKDW
                     KVTARAGLGYQFDLFANGETVLSDASGEKRIKGEKDGRILMNVGLNAEIRDNLRFGLE
                     FEKSAFGKYNVDNAINANFRYSF"
     gene            5497..6079
                     /locus_tag="JN001_003574"
                     /pseudo
     CDS             5497..6079
                     /locus_tag="JN001_003574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000291745.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(6482..6882)
                     /locus_tag="JN001_003575"
                     /pseudo
     CDS             complement(6482..6882)
                     /locus_tag="JN001_003575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000998048.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            6886..7461
                     /locus_tag="JN001_003576"
                     /pseudo
     CDS             6886..7461
                     /locus_tag="JN001_003576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368704.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            7512..7606
                     /locus_tag="JN001_003577"
                     /pseudo
     CDS             7512..7606
                     /locus_tag="JN001_003577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT         2216 a         1728 c         1787 g         1875 t
ORIGIN      
        1 acgacatttc ttcgataacg tgtgttcttt ctcctgcatc agcttataca gggaagtcag
       61 gagcggtcta ctctgcattt gcctgaccgc caggcgttca gacaccggta acccgcgtat
      121 atcgtgctct atggcgtaca gttcaccgat tagtttcaga gcttcttccg ccgtcgcgct
      181 tttagtactg atatatacat cgtggatttt gcgtcgcgca tgagcccagc atcctgcttc
      241 cgtccgtcgg cgcgcagctc tccaatccgg ataatatcac cgacaacgcc gaccggatca
      301 gtgatgagtg gaaggccttc gaccgcgcca tcgaaagtaa ccacggtgtt cctgaggctg
      361 ccgcacgcct gaaagaacac ctccgggact tccgtaacac acatgccgcc gcacagctgg
      421 gcgtttctgc tgtggcggcc cttcccggtg atcgcctctc tgccgcactg atggttaaat
      481 cacacggcac cgtcagtgtc gacggtaaag tctctgatgc tgacctcact tacctggaag
      541 aggtggcaaa cagcaccggg caggaggtgg acaaaagccg cctgacatca caggcctttg
      601 cccgcgcggc actgatcact gatgtgggta ttgctctggc tacggaactg gaaacggccg
      661 ggcagaaatg gtctctgggc ttccccccca aattccagcg cgtcgacctg ttcaactaca
      721 acgtgctggt cagaaattat gacagcagcg ccttcaaagg cgaccgctac cacaacacga
      781 aaaatggcat caacgccgac atcggtgcca gtacgaacct ggatgacaac tggacgctgg
      841 gactggtcgc acagaacctg atcccccgta gtattgagac aaaagaagtg aacggtatca
      901 cggaaacctt caggatccgc ccgcaggtga cggccggtgt ctcctggcac aacgcgatgt
      961 tcaccaccgc atttgatgtg gatctgaccc cggccagcgg tttcacctcc gacagcaacc
     1021 gtcagtttgc cgccattggc gcagaattta atgcctggaa atgggcacag ctgcgcgccg
     1081 gttaccgtca gaatctggcc ggtaacgacg gcagtgcatt cacggccggg gtggggatct
     1141 caccgtttga tgtggttcac cttgatgttg caggcctgat cggcacggac aacacttacg
     1201 gtgcggtcgc acagttccag ttcaccttct gagttccacc tgcaaaacag catgcacatt
     1261 atcgctgcat gttgtttcca tcatcaaaag tctgtcggac atcgacagac ttaactcccc
     1321 cggataatac agaaaacctg taaaggattg accggaaaca acaaagatca aattttgatc
     1381 gcaaaggtca aaatacaaac accaggtgat caatatctga ccaatcaatc acttgtgctt
     1441 atcttttttt tcattttgtt acatctgtca tacaaatata actgacagtg attatcatta
     1501 tacccttatc agttacgtac catgactgat agttccccgt tgtaattaaa tgctatccca
     1561 taaccacaac tcagaaatat cggagttcac gtatgaataa aatttattca ctgaaatata
     1621 gtcatattac aggtggatta gttgctgttt ctgaactgac ccggaaagtt agtgtcggta
     1681 catcaagaaa gaaagttatc ctcggtatta ttttatcctc aatatatgga agttatggtg
     1741 aaacagcatt tgcagcaatg ctggatataa ataatatatg gacccgcgat tatcttgacc
     1801 ttgctcaaaa cagaggagag ttcagaccgg gtgcaacaaa tgttcaatta atgatgaaag
     1861 atggaaagat atttcatttt ccagaactac ctgtacctga tttttctgct gtttccaaca
     1921 aaggtgcaac aacatcaatt ggaggtgcgt acagtgttac tgcgactcat aacggtacac
     1981 agcatcatgc aataacaaca cagtcatggg atcagacagc atataaagca agtaacagag
     2041 tatcatctgg cgacttttcg gttcatcgtc tgaataaatt cgtcgtggaa acaacagggg
     2101 ttacggagag tgccgacttc tcactttctc ccgaagatgc gatgaaaaga tatggcgtaa
     2161 actacaacgg taaggaacaa ataattggct tcagagcagg tgccggaaca acctcaacga
     2221 tattaaacgg caaacaatat ctgtttggac aaaactataa tcccgacttg ttaagcgcaa
     2281 gtctttttaa tctggactgg aaaaacaaga gttacattta taccaacaga acccctttta
     2341 aaaactcacc aatttttggc gatagtggtt ctggttctta tctatatgat aaagaacaac
     2401 aaaaatgggt tttccatggt gttaccagta cagttggttt tatcagtagt accaatatag
     2461 cctggacaaa ctactcgtta tttaataata ttctggtaaa caatttaaaa aagaatttca
     2521 caaacactat gcagctggat ggtaaaaaac aagagttatc atcgattata aaagataagg
     2581 acctgtctgt ctcaggagga ggggaattaa cgctcaagca ggataccgat cttggcattg
     2641 gcgggcttat attcgataag aaccagacat ataaagtgta cggaaaagat aagtcttata
     2701 aaggtgccgg gatagatatt gataataata ccaccgttga atggaatgtt aagggcgttg
     2761 ccggagataa tctgcataaa ataggtagtg gtactctgga tgtaaaaata gcacagggaa
     2821 ataaccttaa aataggtaat gggactgtca tccttagtgc tgaaaaagcc ttcaataaaa
     2881 tttacatggc cggaggtaaa ggtacggtaa aaataaatgc caaagacgct ttaagcgaaa
     2941 gcggtaatgg cgaaatctat tttaccagaa atggcggaac actggatcta aacggctatg
     3001 accagtcatt tcagaaaatc gcagcaacag atgcgggaac aaccgtaacg aactcaaacg
     3061 tgaagcaatc aacattatca cttactaata ctgatgcata tatgtaccat gggaatgtat
     3121 caggtaatat aagcataaat catattatca atactaccca gcaacataac aataatgcca
     3181 atctgatctt tgatggctca gtcgatatca aaaacgatat ctctgtccgg aatgcacagt
     3241 taacattaca aggacatgcg acagaacatg ccatatttaa agaaggcaat aacaactgtc
     3301 caattccttt tttatgtcaa aaagactatt ctgctgccat aaaggaccag gaaagcactg
     3361 taaataaacg ttacaatacg gaatataagt ccaacaatca gatagcctct ttttcccagc
     3421 ccgactggga aagtcgtaaa tttaatttcc ggaaattaaa tttagaaaac gcaaccctga
     3481 gtataggccg ggatgctaat gtaaaaggac acatagaggc taaaaactct caaattgttc
     3541 tgggaaataa aactgcatac attgacatgt tctcaggaag aaacattact ggcgaaggtt
     3601 ttggattcag acaacagctt cgctccgggg attcagcagg cgaaagtagt ttcaacggca
     3661 gtctgagtgc tcaaaacagc aaaataactg ttggtgataa atcaactgtt actatgactg
     3721 gtgcattatc cttaattaat acagacctga ttatcaacaa aggagctact gttaccgccc
     3781 agggaaaaat gtatgtagat aaagctattg aactggccgg aaccctgaca ttaacaggca
     3841 cccctacaga aaataataaa tacagcccgg caatctatat gtcagatgga tataatatga
     3901 cagaagatgg tgccacgtta aaggctcaaa attatgcctg ggtcaatggt aatataaaat
     3961 cagacaaaaa agcatctatt ctgtttggtg ttgaccagta taaagaagat aacctggaca
     4021 aaaccacaca cacaccgctg gctacaggtt tgctgggtgg ctttgatact tcttataccg
     4081 gaggtattga tgctcctgct gcctcagcca gcatgtataa caccttatgg agagtaaacg
     4141 gacagtcagc cctgcaatca ttaaaaaccc gcgacagtct tttgttgttt agtaacatag
     4201 agaattcggg tttccatact gtgacagtaa acacactgga tgccactaat actgctgtga
     4261 ttatgcgggc tgatctgagc cagtctgtaa atcaatcgga taaactcatt gttaaaaatc
     4321 agttaaccgg aagcaataac agtctgtcgg tcgatataca gaaagtggga aataataact
     4381 caggattaaa cgttgacctg ataacagccc caaaaggaag caataaagag atatttaaag
     4441 ccagtactca ggccataggt ttcagcaaca tatctcctgt gatcagcacg aaagaggatc
     4501 aggaacatac cacgtggacc ctgaccggat ataaggtggc tgaaaataca gcatcttcca
     4561 gtgcagcaaa atcgtatatg tccggtaatt acaaagcctt cctgacagaa gtcaacaacc
     4621 tgaataaacg aatgggggat ctgcgtgaca ccaatggcga ggtcggtgca tgggcccgca
     4681 tcatgagcgg agcaggttca gcttctggtg gatacagtga caactacacc catgtgcaga
     4741 ttggtgtgga taaaaaacat gagctggatg gacttgacct tttcactggt ctgactatga
     4801 cgtataccga cagtcatgcc agcagtaatg cattcagtgg caagacgaag tccgtcgggg
     4861 caggtctgta tgcttccgct atatttgact ctggtgccta tatcgacctg attagtaagt
     4921 atgttcacca tgataatgag tactcagcga cctttgctgg gctcggaaca aaagactaca
     4981 gttctcattc cttgtatgtg ggtgctgaag caggctaccg ctatcatgta acagaagact
     5041 cctggattga gccgcaggca gaactggttt atggggccgt atcaggtaaa cggttcgact
     5101 ggcaggatcg cggaatgagc gtgaccatga aggataagga ctttaatccg ctgattgggc
     5161 gtaccggtgt tgatgtgggt aaatccttct ccggtaagga ctggaaagtc acagcccgcg
     5221 ccggccttgg ctaccagttt gacctgtttg ccaacggtga aaccgtactg agtgatgcgt
     5281 ccggtgagaa acgtatcaaa ggtgaaaaag acggtcgtat tctcatgaat gttggtctca
     5341 acgccgaaat tcgcgataat cttcgctttg gtcttgagtt tgagaaatcg gcatttggta
     5401 aatacaacgt ggataacgcg atcaacgcca acttccgtta ctctttctga taacagcccg
     5461 ggccgcgttt gcggcccttc ttctaccgga gagaatatgt attaccctgt gacagactat
     5521 atcgctcttg ctctcattat tagctttctt tttctgacat tatttatctg cctgttatgc
     5581 cttaaacatg agcgaataaa aaaagaaact atcaggcaaa aaaaatgcac atattctgga
     5641 gcatggctgg aatgcaactg agttctcatg gttccgatac ggacagtata acgaaacggg
     5701 tatttacatc tcgatcgaga agaccattat cattacaatc accgtttctg gtgggtgctt
     5761 taaaaaagaa tacagcattg tctcccacat gctggtcact gacaccataa cagaggccac
     5821 cctgtacgaa aacgggctgt atacgcgcca catcagactc agtcgcccag tatctgacag
     5881 caaatacccc ttgccacccg gatctcagct cattaaaaat atgaccttac gactgcgcct
     5941 gcaggatcag caggaagaaa catccgtgac attatttcag ggaaaaatga gtaccgacgg
     6001 aaataactat tacatcatca aaggtaaagt aagctcagta cttctgttat taaaaatgct
     6061 gcagattaat cacgcctgat ctctgtcccg gtattttagc ccgaggtata ttctgaaata
     6121 tcattcatca tgaccggcgt ttatacaaac gccggtcatt cgctaacagc ttcaccgttc
     6181 cttcccccat ccaggttccg catgagcgtg ttgtaatgtt cataagcgta ttatcgtaag
     6241 cttccgggga actcatattg acgcgttttt caggcgcgcg tcatcggcgg cgcatacgaa
     6301 cgatcgtggt ttgataacgg ttgatttatt ttgttgcaca ggggcgatcg ctaggcaggt
     6361 accggaggcg ggctctgaag tactgagtag ggtgatcgcg tcaggccgcg aagtactgac
     6421 tcggggatta atagcaggtg atgagtaagc gtacagcgag ggccgtattg acggggatgt
     6481 gttattcagc tggcagtgct atgcgccacg gaagcagttc gctgacccgg ttgaccggcc
     6541 agtctgctat gacgccaagc acatggcgaa ggtagctttc tggatccacg tcattcagtt
     6601 tgcacgtccc gatcaggctg tacagtagcg ctccccgctc accaccatgg tcagagccga
     6661 agaacaggaa gtttttacga cccagactga ccgcccgcaa ggcattttca gcgatgttgt
     6721 tgtcgatttc cacccagcca tcgttcgcat agtacgtcag tgccggccac tggttaagtg
     6781 cgtacgcgaa cgccttcgcc aactctgagt gtcgcgacag ggtcttcatc ttttccgcaa
     6841 ccagctttcc agggatttca acagcggttt cgtttttcgc tgacaccatg gagggagtgg
     6901 ttaaaagagc aacgagaaag tggtaattat aacgccagcc ggatatggcg ggaaatggtg
     6961 gcccggggat ttacaggcag tgaaaccatc gtcagggatg cggttgccaa atggcgtaaa
     7021 ggctggaacc caccggttac tactgccgtc agacttcctt cagtgtcccg ggtaagccgc
     7081 tggttgatgc cctggagaat aaccagggat gaagaaaatt atgcttcccg atttattagt
     7141 ctgatgtgtg aaaaagaacc tgagctgaaa atagcgcagc aactggcact cgagttctac
     7201 cgtattctga aaacccaaaa taaatcacag ctaagcagtt ggttcactcg agtccacgaa
     7261 agcggttcag cagaatttcg gcgcgtggcg gcggggatgg aagctgatgc tgcagctata
     7321 tgtgaggcaa tcagtagtcg ctggagtaat ggtgttgtcg aaggtcatgt aaatcgcctg
     7381 aagaagatgc tgaaacgcca gatgtatggt cgagcaggat ttgaactact caggcagagg
     7441 gtaatgagtc cactggcatg aaaatctcca cccaggttgc ggaagagcca cttttcatcc
     7501 gtcgttgaca gttataccgc cagtcagaaa tataccgtcg tcagggcgtg gagctgagcc
     7561 gtgccacact gggtcgctgg accggtgccg ttgctgaact gctgga
//
LOCUS       DADMJE010000178         7534 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.181, whole genome shotgun sequence.
ACCESSION   DADMJE010000178 DADMJE010000000
VERSION     DADMJE010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7534
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.181"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(214..1752)
                     /gene="lnt"
                     /locus_tag="JN001_003578"
     CDS             complement(214..1752)
                     /gene="lnt"
                     /locus_tag="JN001_003578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HAY9054673.1"
                     /translation="MAFASLIERQRIRLLLALLFGACGTLAFSPYDVWPAAIISLMGL
                     QALTFNRRPLQSAAIGFCWGFGLFGSGINWVYVSIATFGGMPGPVNIFLVVLLAAYLS
                     LYTGLFAGVLSRLWPKTTWLRVAIAAPALWQVTEFLRGWVLTGFPWLQFGYSQIDGPL
                     KGLAPIMGVEAINFLLMMVSGLLALALVKRNWRPLVVAVVLFALPFPLRYIQWFTPQP
                     EKTIQVSMVQGDIPQSLKWDGDQLLNTLKIYYNATAPLMGKSSLIIWPESAITDLEIN
                     QQPFLKALDGELRDKGSSLVTGIVDARLNKQNRYDTYNTIITLGKGAPYSYESADRYN
                     KNHLVPFGEFVPLESILRPLAPFFDLPMSSFSRGPYIQPPLSVNGIELTAAICYEIIL
                     GEQVRDNFRPDTDYLLTISNDAWFGKSIGPWQHFQMARMRALELARPLLRSTNNGITA
                     VIGPQGEIQAMIPQFTREVLTTNVTPTTGLTPYARTGNWPLWVLTALFGFAAVLMSLR
                     ARKR"
     gene            complement(1777..2655)
                     /gene="corC"
                     /locus_tag="JN001_003579"
     CDS             complement(1777..2655)
                     /gene="corC"
                     /locus_tag="JN001_003579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308723.1"
                     /note="CorC(YbeX) belongs to the Cyclin M Mg2+ Exporter
                     (CNNM) family, and was characterized as belonging to a set
                     of three proteins, at least one of which must be present
                     for CorA to function; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM family magnesium/cobalt transport protein
                     CorC"
                     /protein_id="HAY9054674.1"
                     /translation="MSDDNSHSSDTISNKKGFFSLLLSQLFHGEPKNRDELLALIRDS
                     GQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSR
                     FPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRS
                     QRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALA
                     SIEDFNEAFGTHFSDEEVDTIGGLVMQAFGHLPARGETIDIDGYQFKVAMADSRRIIQ
                     VHVKIPDDSPQPKLDE"
     gene            complement(2745..3212)
                     /gene="ybeY"
                     /locus_tag="JN001_003580"
     CDS             complement(2745..3212)
                     /gene="ybeY"
                     /locus_tag="JN001_003580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014169133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HAY9054675.1"
                     /translation="MSQVILDLQLACEDNSGLPEESQFQTWLNAVIPQFQEESEVTIR
                     VVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQGK
                     PLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLALGYEDPYIAEKE"
     gene            complement(3209..4288)
                     /locus_tag="JN001_003581"
     CDS             complement(3209..4288)
                     /locus_tag="JN001_003581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706552.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HAY9054676.1"
                     /translation="MFSFRRHTDKRNGLNIDTREITLEPADNARLLSLCGPFDDNIKQ
                     LERRLGIEINRRDNHFKLTGRPICVTAAADILRSLYVDTAPMRGQIQDIEPEQIHLTI
                     KEARVLEQSAESVPEYGKAVNIKTKRGVIKPRTPNQAQYIANILDHDITFGVGPAGTG
                     KTYLAVAAAVDALERQEIRRILLTRPAVEAGEKLGFLPGDLSQKVDPYLRPLYDALFE
                     MLGFEKVEKLIERNVIEVAPLAYMRGRTLNDAFIILDESQNTTIEQMKMFLTRIGFNS
                     KAVITGDVTQIDLPRNTKSGLRHAIEVLADVEEISFNFFHSEDVVRHPVVARIVNAYE
                     AWEEAEQKRKAALAAERKREEQEQK"
     gene            complement(4402..5826)
                     /gene="miaB"
                     /locus_tag="JN001_003582"
     CDS             complement(4402..5826)
                     /gene="miaB"
                     /locus_tag="JN001_003582"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HAY9054677.1"
                     /translation="MTKKLHIKTWGCQMNEYDSSKMADLLDATHGYQLTDVAEEADVL
                     LLNTCSIREKAQEKVFHQLGRWKLLKEKNPDLIIGVGGCVASQEGEHIRQRAHYVDII
                     FGPQTLHRLPEMINSVRGDRSPVVDISFPEIEKFDRLPEPRAEGPTAFVSIMEGCNKY
                     CTYCVVPYTRGEEVSRPSDDILFEIAQLAAQGVREVNLLGQNVNAWRGENYDGSTGSF
                     ADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHLPVQSGSDRILNL
                     MGRTHTALEYKAIIRKLRAARPDIQISSDFIVGFPGETTEDFEKTMKLIADVNFDMSY
                     SFIFSARPGTPAADMVDDVPEEEKKQRLYILQERINQQAMAWSRRMLGTTQRILVEGT
                     SRKSIMELSGRTENNRVVNFEGTPDMIGKFVDVEITDVYPNSLRGKVVRTEDEMGLRV
                     AETPESVIARTRKENDLGVGYYQP"
     gene            5972..7147
                     /gene="ubiF"
                     /locus_tag="JN001_003583"
     CDS             5972..7147
                     /gene="ubiF"
                     /locus_tag="JN001_003583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706550.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol
                     hydroxylase"
                     /protein_id="HAY9054678.1"
                     /translation="MTNQPTEIAIVGGGMVGGALALGLAQHGFSVTVIEHAEPAPFVA
                     DSQPDVRISAISAASVSLLKGLGVWDAVQAMRCHPYRRLETWEWETAHVVFDAAELKL
                     PLLGYMVENTVLQQALWQALEAHPKVTLRVPGSLIALHRDNDLQELELKGGETIRAKL
                     VIGADGANSQVRQMAGIGVHAWQYAQSCMLISVQCENDPGDSTWQQFTPDGPRAFLPL
                     FDNWASLVWYDSPARIRQLQNMNMAQLQAEIAKHFPSRLGYVTPLAAGAFPLTRRHAL
                     QYVQPGLALVGDAAHTIHPLAGQGVNLGYRDVDALIDVLVNARSYGEAWASYPVLKRY
                     QMRRMADNFIMQSGMDLFYAGFSNNLPPLRFVRNLGLMAAERAGVLKRQALKYALGL"
     gene            complement(7301..7375)
                     /locus_tag="JN001_003584"
     tRNA            complement(7301..7375)
                     /locus_tag="JN001_003584"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7341..7343),aa:Gln,seq:ctg)
     gene            complement(7413..7487)
                     /locus_tag="JN001_003585"
     tRNA            complement(7413..7487)
                     /locus_tag="JN001_003585"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(7453..7455),aa:Gln,seq:ctg)
BASE COUNT         1726 a         1996 c         2043 g         1769 t
ORIGIN      
        1 ttcagcggat ggtagaaaaa tatttgtcat ggcgaagaac gggttgatcc aaatggacag
       61 gacgcgctcg cttgatccgc aggcaattat tcgtcatccc caatatggca atgtggcttg
      121 tatccctgaa ccgtaagaaa aaggggcatg ataaccatgc cccaaagctc aatgagaaag
      181 tacgttttgc tcatgcagga tacatcaggc acatcaacgt ttacgtgctc gcagactcat
      241 caacacagcg gcaaaaccaa acagtgccgt cagcacccac agtggccagt tgccggtacg
      301 tgcatacggt gtgagtccgg tggtcggtgt cacattagtg gttaacacct cgcgggtgaa
      361 ctgcgggatc atcgcctgaa tctcaccctg cgggccaatc accgccgtaa tgccgttgtt
      421 ggtgctgcgc aacagtgggc gcgccagctc cagcgcacgc attcgcgcca tctggaagtg
      481 ttgccatgga ccaatagatt taccaaacca cgcatcgttg gagatagtca gcagatagtc
      541 ggtatccggg cggaagttat cgcgcacttg ctcgccgaga atgatctcgt agcaaatagc
      601 cgcagtaagc tcaataccat ttactgacag cggcggctgg atatatggcc cacggctgaa
      661 cgacgacatc ggcagatcaa agaacggtgc taacggacgc agaatcgact ccagcgggac
      721 aaactcgcca aacggcacca gatggttttt gttatagcga tcggctgatt cgtagctgta
      781 cggtgcacct ttacccagtg tgatgatggt gttgtaggta tcgtagcggt tctgcttatt
      841 gagacgcgcg tcgacaatcc cggttaccag cgagctacct ttatcgcgca actcaccgtc
      901 cagtgctttg aggaacggtt gctgattaat ttccagatcg gttatcgccg actccggcca
      961 gataatcaac gatgatttgc ccatcagcgg agccgttgcg ttgtagtaaa tcttcagcgt
     1021 attaagaagc tgatctccat cccatttcag tgattgcgga atatcgccct gaaccatcga
     1081 aacctgaatg gttttctccg gttgcggggt aaaccattgg atgtaacgca gcgggaaggg
     1141 tagggcaaac agcacgacgg ccaccaccag cggacgccag ttgcgtttga ccaacgccag
     1201 tgccagcagg ccactaacca tcatcagcag gaagttaatg gcttccacgc ccattatcgg
     1261 tgccagccct tttaacgggc catcaatctg gctatagccg aactgtaacc acgggaagcc
     1321 tgtcagtacc caaccgcgca gaaactcggt cacttgccag agagcagggg cggcaatcgc
     1381 cacgcgcagc caggtggttt tcggccacag acgcgacagc acgccagcaa acagtccggt
     1441 atacagcgac aaatacgccg ccagcagcac caccaggaag atgttaaccg ggccaggcat
     1501 tccgccaaag gtcgcgatgc tgacatagac ccagttaata ccgctgccaa agaggccaaa
     1561 tccccagcaa aagccaatag cggcagactg gagtggacgg cggttaaagg tcaacgcctg
     1621 aagccccatc aacgaaataa tcgccgcagg ccagacgtcg taaggagaga aggccagcgt
     1681 tccgcaggca ccgaataata acgccagcag caggcgaatg cgctggcgtt caattaatga
     1741 ggcaaaagcc atgtagttat ctatccagtt tcggttttat tcatccagct tcggctgggg
     1801 tgagtcatcc gggattttga catgaacctg aataatacgt cgactgtcgg ccatcgccac
     1861 tttgaactgg taaccgtcga tgtcgatagt ttcgccacgc gccggaagat gcccaaacgc
     1921 ctgcatcacc agaccaccga tagtgtcgac ttcttcatcg ctaaagtggg tgccgaacgc
     1981 ttcgttgaag tcttcaatgg aagccagtgc gcgcacggtc caggtatgac gactcagctg
     2041 acggaagtcg atatcatctt cttcgtcata ttcgtcttca atctcaccaa caatcagttc
     2101 caggatgtct tcaatggtca ccagaccgga aaccccaccg aattcgtcaa tgacgatcgc
     2161 catgtggtaa cgctgagagc gaaactcttt cagcatccgg tctacgcgct tactttcagg
     2221 aacgacaacc gcctgacgta acactttgtc catgctgaag gcttcagcat cgctgcgcat
     2281 aaacggcagc aagtctttcg ccatcagaat cccttcaatg tgatctttgt cttcgctaat
     2341 caccgggaaa cgtgagtggg cggactcgat gatgacatca aggcattcgt ccagcgtctg
     2401 gttgcgtttc agggtaatca tctgggagcg ggggatcatg atgtcgcgaa cgcgttggtc
     2461 tgcgatgtcc atcacccctt cgagcatatc gcgcgtatct tcgtcgataa ggtcgttctg
     2521 cccggaatca cggatcagcg ccagcagttc gtcacggttt ttcggttcac cgtggaaaag
     2581 ttggctgagt aacagggaga aaaatccctt cttgttgctt atcgtgtcac tactgtgtga
     2641 attgtcgtcg ctcatggcgt cgtatgggtt ctcatgttag ttaatcaaaa cgccgtcgtt
     2701 aatcaccaac ggcggggacg tctgccagtc aaatgcctgg caaattattc tttctcggca
     2761 atgtacggat cctcatagcc cagagcaagc ataatctctg tttcgagggc ttccatttct
     2821 tctgcttcgt catcttcgat gtgatcgtaa cctaacaaat gcagactgcc gtgcaccacc
     2881 atatgcgccc agtgcgcctc cagtggtttg ccttgctcct gagcttcctt ctcaaccacc
     2941 tgacggcaga taaccagatc gcccagtagc gacatttcca tgccaggcgg cacttcaaac
     3001 gggaaggaga gcacgttggt cggcttatcc ttaccgcgat aggtcagatt cagactgtgg
     3061 ctttcggcgg tatcgaccac gcgaatagtc acttccgatt cttcctgaaa ctgcgggatc
     3121 accgcattca gccatgtttg aaactggctc tcttccggta acccggaatt atcttcacat
     3181 gccagttgta aatcgaggat cacctgactc atttttgttc ctgttcttcg cgcttgcgtt
     3241 ctgccgccag cgccgctttt cgtttttgtt cggcttcttc ccaggcttca taggcgttaa
     3301 cgatacgcgc caccacaggg tgacgaacca cgtcttcgct gtggaagaag ttaaagctga
     3361 tctcttcgac atcggccagt acttcgatgg cgtgacgtaa gcctgattta gtattacgcg
     3421 gcaggtcgat ctgtgtgacg tcgccggtga taaccgcttt tgagttaaaa ccgatacggg
     3481 tcaggaacat cttcatctgt tcgatggtgg tgttctggct ctcatcgaga atgataaacg
     3541 cgtcgttcag cgtacgacca cgcatatagg ccagcggcgc gacttcaata acgttgcgct
     3601 caatcagttt ctcaactttc tcaaagccca gcatttcaaa cagcgcgtcg tacagtgggc
     3661 gcagatacgg gtctactttc tggcttaaat cgccaggcag gaagcccagt ttctcaccgg
     3721 cttcgaccgc cggacgagtc agcagaatac ggcgaatctc ctgacgctcc agggcatcaa
     3781 ctgccgcagc cactgccagg taggttttac ccgtacccgc cgggccaacg ccgaaggtaa
     3841 tgtcatggtc gagaatattg gcgatgtact gcgcctggtt tggcgtgcgc ggcttaatta
     3901 cgccgcgttt ggttttgata ttgaccgctt tgccgtactc cggcacgctc tccgcacttt
     3961 gctccagtac tcgcgcttct ttaatcgtaa ggtggatctg ttccggttcg atatcctgaa
     4021 tctgaccgcg catcggggct gtatcgacat acaggctacg cagaatgtct gccgcagcgg
     4081 tgacgcaaat cggacggccg gtcagtttaa agtggttgtc gcggcgattg atctcgatgc
     4141 cgagacggcg ttcgagctgc ttgatgttgt catcaaacgg gccgcacagg ctcaacagac
     4201 gcgcgttgtc tgctggctcc agggtgattt cgcgagtgtc tatgttcaaa ccgttcctct
     4261 tatctgtatg ccgccggaag ctgaacattc accggcctat aaggaaatta ttcacgccac
     4321 aggaaaaagg cgcaagcatt gcgataaaga tggggataaa gagagaaaaa acaaggccca
     4381 ccggaacggc gggcctgaga attacggctg ataataaccc acgccaaggt cgttttcttt
     4441 gcgggtacgg gcaatcaccg attccggtgt ttctgccacg cgcaggccca tttcatcttc
     4501 agtacgcacc actttaccgc gcagagagtt cgggtagacg tcggtaattt ctacatcgac
     4561 gaatttaccg atcatatccg gtgtgccctc gaagttgacc acgcggttat tttcggtacg
     4621 cccggaaagc tccatgatgc tcttacgcga agtcccttct accagaatac gctgggtggt
     4681 gccgagcatc cggcggctcc atgccatcgc ttgctgattg atacgttctt gcagaatata
     4741 cagacgctgc ttcttctctt cttccggaac atcatcaacc atatcggcgg ctggtgtacc
     4801 cggacgtgca gagaagataa agctgtagct catgtcgaaa ttgacgtcgg caatcagctt
     4861 catcgttttc tcgaagtctt cggtggtttc gccagggaag ccaacgatga aatcagaact
     4921 gatctgaata tctggacgcg ccgcacgcag tttacggatg atcgctttgt actccagtgc
     4981 cgtatgagta cggcccatca ggttcagaat gcgatcggaa ccgctctgta ccggcagatg
     5041 caggaagctc accagctccg gcgtgtcgcg atacacttcg atgatatcgt cggtgaattc
     5101 gatcggatgg ctggtggtaa agcgaatacg atcgatcccg tcgatcgcag caaccagacg
     5161 cagcagatcg gcaaacgatc cggtggagcc gtcgtagttt tcaccacgcc aggcgttcac
     5221 gttctgaccg agcaggttga cttcacgcac gccctgagcc gcaagctggg caatctcaaa
     5281 cagaatatcg tcagacggac ggcttacctc ttcaccacgg gtgtaaggca ccacgcagta
     5341 ggtgcaatat ttattgcagc cttccatgat ggagacaaac gcggtcggcc cttcggcgcg
     5401 cggttccggt agacggtcaa acttctcgat ttccgggaag ctgatatcta caaccgggct
     5461 gcggtcgccg cgcacggagt tgatcatctc cggcagacgg tgcagcgttt gcggcccaaa
     5521 aataatatcg acatagtggg cgcgctggcg aatgtgctcg ccttcttgcg atgccacgca
     5581 gccaccgacg ccgataatca ggtctggatt cttctctttt aacagtttcc agcgacccaa
     5641 ctgatggaag actttttcct gagccttctc gcggattgag caggtgttca gcagcagcac
     5701 atccgcttct tccgccacgt cggtcagttg atagccgtgg gtggcatcca gcagatcggc
     5761 catcttcgat gaatcgtact cgttcatctg acagccccag gttttaatat ggagtttttt
     5821 ggtcatcgac ttgctcttgc gaaatagtag ccaggaatgc agggcgcata gtgtaatgct
     5881 ttgctgccgt tgtggccagt atgagcgtta tcagcccttg ggggtaaaaa tcctgtaaac
     5941 ttaaagcata ttgctaacag gatgattgac catgacaaat caaccaacgg aaattgccat
     6001 tgtcggcgga ggaatggtcg gcggcgcgct ggcgctgggg ctggcacagc acggattttc
     6061 ggtaacggtg atcgagcacg cagaacctgc accgtttgtc gctgatagcc aaccggacgt
     6121 gcggatctcg gcgatcagcg ccgcatcggt atcattgctt aaagggttag gggtctggga
     6181 tgcagtacag gctatgcgtt gccatcctta ccgcagactg gaaacgtggg agtgggaaac
     6241 ggcgcatgtg gtgtttgacg ccgctgaact taagctaccg ttgcttggct atatggtgga
     6301 aaacaccgta ctgcaacagg cgctgtggca ggcgctggaa gcgcatccga aagtaacgtt
     6361 acgtgtgcca ggctcgctga ttgcattaca tcgagataat gatcttcagg agctggaact
     6421 gaagggcggt gaaacgatcc gcgcgaaact ggtgattggt gccgacggcg caaattctca
     6481 ggtgcggcag atggcgggaa ttggcgttca tgcctggcag tatgcgcagt cgtgcatgtt
     6541 gattagcgta cagtgtgaga acgatcccgg cgacagcacc tggcagcaat ttaccccgga
     6601 cggaccgcgt gcgtttctgc cgttgtttga taactgggca tcgctggtgt ggtatgactc
     6661 tccggcgcgt attcgccagt tgcagaatat gaatatggcg caactccagg cggaaatcgc
     6721 gaagcatttc ccgtcgcgtc tgggttacgt tacaccgctt gccgctggtg cgtttccgct
     6781 gacgcgccga catgcgttgc agtatgtgca gccggggctt gcgctggtgg gcgatgccgc
     6841 gcataccatc catccgctgg cggggcaggg ggtgaatctt ggttatcgtg atgtcgatgc
     6901 cctgattgat gttctggtga atgcccgcag ttacggtgaa gcgtgggcca gttatcctgt
     6961 cctcaagcgt taccagatgc ggcgcatggc ggataacttc attatgcaaa gtggtatgga
     7021 tctgttttat gccggattca gtaataatct gccgccgctg cgttttgtgc gtaatctcgg
     7081 gttaatggcg gcagagcgtg ctggcgtgtt gaaacgtcag gcgctgaaat atgcgttagg
     7141 gttgtagcct tacaacattg ccggatgcgt gccaaccgta ggtcggataa gacgcggcag
     7201 cgtcgcatcc gacattgaag gataagacgt gtcaacatcg cattcgacat tgaatgaacg
     7261 cagaaaagca aaaagctcgc cgaagcgagc ttttttaatg tggctggggt acgaggattc
     7321 gaacctcgga atgccggaat cagaatccgg tgccttaccg cttggcgata ccccaactgg
     7381 gtgcacttac gatgtaagcg tcttgaataa attggctggg gtacgagggt tcgaacctcg
     7441 gaatgccgga atcagaatcc ggtgccttac cgcttggcga taccccaaca aattggtttt
     7501 tgaatttgcc gaacgtattc gacacattca gaat
//
LOCUS       DADMJE010000179         7526 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.182, whole genome shotgun sequence.
ACCESSION   DADMJE010000179 DADMJE010000000
VERSION     DADMJE010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7526)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7526)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7526
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.182"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..590
                     /locus_tag="JN001_003586"
     CDS             <1..590
                     /locus_tag="JN001_003586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707232.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HAY9054679.1"
                     /translation="INQLADKQTIKQTLFARQPAKIHKPYPTNSKIIMGDVLNHAALK
                     QAMQGQDVVYANLTGEDLDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFGEWNN
                     AVIGEPLKPFRRAADAIEASGLEYTILRPAWLTDEDIIDYELTSRNEPFKGTIVSRKS
                     VAALITDIIDKPEKHIGENIGINQPVTDGDKPLFM"
     gene            900..1628
                     /gene="mpaA"
                     /locus_tag="JN001_003587"
     CDS             900..1628
                     /gene="mpaA"
                     /locus_tag="JN001_003587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein tripeptide amidase MpaA"
                     /protein_id="HAY9054680.1"
                     /translation="MTVTRPRAERGAFPPGTEHYGRSLLGAPLIWFPAPAASRESGLI
                     LAGTHGDENSSVVTLSCALRTLTPSLRRHHVVLCVNPDGCQLGLRANANGVDLNRNFP
                     AANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRIQPAWVVSFHDPL
                     ACIEDPRHSELGEWLAQAFELPLVTSVGYETPGSFGSWCADLNLHCITAEFPPISSDE
                     ASEKYLFAMANLLRWHPKDAIRPS"
     gene            complement(1603..2568)
                     /gene="ycjG"
                     /locus_tag="JN001_003588"
                     /pseudo
     CDS             complement(1603..2568)
                     /gene="ycjG"
                     /locus_tag="JN001_003588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707230.2"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-Ala-D/L-Glu epimerase"
     gene            2687..3193
                     /gene="tpx"
                     /locus_tag="JN001_003589"
     CDS             2687..3193
                     /gene="tpx"
                     /locus_tag="JN001_003589"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HAY9054681.1"
                     /translation="MSQTVHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFA
                     GKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNN
                     VITLSTFRNAEFLQAFGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYE
                     AALAVLKA"
     gene            complement(3237..4778)
                     /gene="tyrR"
                     /locus_tag="JN001_003590"
     CDS             complement(3237..4778)
                     /gene="tyrR"
                     /locus_tag="JN001_003590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator TyrR"
                     /protein_id="HAY9054682.1"
                     /translation="MRLEVFCEDRLGLTRELLDLLVLRGIDLRGIEIDPIGRIYLNFA
                     ELEFESFSSLMAEIRRIAGVTDVRTVPWMPSEREHLALSALLEALPEPVLSVDMKSKV
                     DMANPASCQLFGQKLDRLRNHTAAQLINGFNFLRWLESEPQDSHNEHVVINGQNFLME
                     ITPVYLQDENDQHVLTGAVVMLRSTIRMGRQLQNVAAQDVSAFSQIVAVSPKMKHVVE
                     QAQKLAMLSAPLLITGDTGTGKDLFAYACHQASPRAGKPYLALNCASIPEDAVESELF
                     GHAPEGKKGFFEQANGGSVLLDEIGEMSPRMQAKLLRFLNDGTFRRVGEDHEVHVDVR
                     VICATQKNLVELVQKGMFREDLYYRLNVLTLNLPPLRDCPQDIMPLTELFVARFADEQ
                     GVPRPKLAADLNTVLTRYAWPGNVRQLKNAIYRALTQLDGYELRPQDILLPDYDAATV
                     AVGEDAMEGSLDEITSRFERSVLTQLYRNYPSTRKLAKRLGVSHTAIANKLREYGLSQ
                     KKNEE"
     gene            complement(4926..5987)
                     /locus_tag="JN001_003591"
     CDS             complement(4926..5987)
                     /locus_tag="JN001_003591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01620 family protein"
                     /protein_id="HAY9054683.1"
                     /translation="MTEPLKPRIDFDGPLEVDQNPKFRAQQTFDENQAQNFAPATLDE
                     APEEEGQVEAVMDAALRPKRSLWRKMVMGGLALFGASVVGQGVQWTMNAWQTQDWVAL
                     GGCAAGALIIGAGVGSVVTEWRRLWRLRQRAHERDEARDLLHSHGTGKGRAFCEKLAQ
                     QAGIDQSHPALQRWYASIHETQNDREVVSLYAHLVQPVLDAQARREICRSAAESTLMI
                     AVSPLALVDMAFIAWRNLRLINRIATLYGIELGYYSRLRLFKLVLLNIAFAGASELVR
                     EVGMDWMSQDLAARLSTRAAQGIGAGLLTARLGIKAMELCRPLPWIDDDKPRLGDFRR
                     QLIGQVKETLQKGKTPSEK"
     gene            complement(5984..7381)
                     /locus_tag="JN001_003592"
     CDS             complement(5984..7381)
                     /locus_tag="JN001_003592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005126510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjX family protein"
                     /protein_id="HAY9054684.1"
                     /translation="MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLL
                     NIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGV
                     SEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLL
                     NGQRGEWSVKWRMMCEGLDPLAPADENRLADIAAAWTDYLHHCKQQGLHFIQPGRFVL
                     PGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHF
                     LRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLF
                     AATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNG
                     EKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHI
                     RLDAALEFLIGDKLR"
BASE COUNT         1860 a         2078 c         1812 g         1776 t
ORIGIN      
        1 tgattaatca actggcagat aaacaaacca ttaaacaaac tttatttgcc cgtcagccag
       61 caaaaatcca caaaccctat ccaactaata gcaagattat tatgggagat gtactgaatc
      121 atgcagcact gaagcaggcc atgcagggac aggacgttgt gtatgccaac cttacggggg
      181 aagatttaga tattcaggca aattcagtga tcgctgcgat gaaagcctgt gatgttaaac
      241 gtctgatctt tgttctttcc ctcggtattt atgatgaagt tccaggaaaa tttggcgaat
      301 ggaataatgc agttattggt gagcccctaa aaccattccg cagggctgcg gatgcaattg
      361 aggcttctgg actggaatat acaattcttc gccctgcctg gctgactgat gaagatatta
      421 ttgattatga gcttacctca cgcaatgaac cattcaaagg tacgatcgta tcacgtaaga
      481 gtgtcgcagc attaatcaca gatatcatcg ataaacctga gaaacacatt ggtgagaata
      541 taggtatcaa tcaacccgtg actgatggtg acaagccatt attcatgtaa atcaattaca
      601 tagttaccat cgtaatgtac tatgtgcagt acgatttatt aaacttatta aggtgaactg
      661 atcaatccga tgcgattaac atgtgtagaa ccagtaagaa taaaatacgc catgtatata
      721 acattacgac ttacatctaa gtcagcataa ttctaatatc tgcacatcaa taaaaatgca
      781 aacaacttcc ggcaaaaaaa gtgatacaag atcgatgaca tagcgttgaa gaaaaggatt
      841 tgataatccg caaaatttgc acaacactgc ctgtaatact tcctgaacca gagacgatca
      901 tgaccgtaac ccgcccacgc gccgaacgcg gcgcatttcc gcccggaaca gaacattacg
      961 gacgttcatt attgggcgcg ccgttaatct ggtttcctgc ccctgcagcc agccgcgaaa
     1021 gtggtttgat tctggctggc actcacggtg atgaaaactc ttcggtcgtc acgctctcct
     1081 gtgctctgcg gacgttgaca ccttctttgc gccgccatca tgtggtgctg tgtgtgaatc
     1141 ctgacggctg ccagctgggg ttacgggcca atgctaatgg tgtggattta aacagaaact
     1201 ttccggcggc gaactggaag gaaggtgaaa cggtttatcg ctggaacagc gccgctgaag
     1261 aacgtgatgt cgtattactg acaggtgaca aacctggctc agaacctgaa acccaggcgc
     1321 tgtgccagct tatacaccgc attcaacctg cctgggtggt ctcattccac gatccactgg
     1381 cctgtattga agatcccaga cacagcgaat taggcgaatg gctggcccag gcgtttgaat
     1441 tgcctctggt aaccagcgtc ggttatgaaa cgcctggctc tttcggcagt tggtgtgcag
     1501 atctcaactt gcattgcatc accgcagagt ttccgcccat ctcctccgac gaagccagcg
     1561 aaaaatatct ctttgcgatg gcaaacttgc tgcgctggca tcctaaagat gcaattcgcc
     1621 cgtcgtgaac tgaagcgccg gttccacatc taccgccagc caggtcggtc cgtcaagatc
     1681 ggcgaaactg acctgcggca ccagcggtaa agcggcgcta atggcacgag aggtacacaa
     1741 catgcagccc agcatcagac tgaaaccttg tgcacgcgct tcagtcgcca gcgccagcgc
     1801 ttccgtcaga ccaccggttt tatcgagctt aatgttaacc atctcatagc gccctttcag
     1861 cgccttcaga ttgctacgtg tatgacaact ctcatcagca caaatcggca acggatgaat
     1921 aaaattctcc agcgccgcat cgtcctgcgc aggaaggggt tgttcaagca tcgcaacgcc
     1981 taaatccgcc aatagctggc aacgcgccgc caacccttct gcacgccagg attcatttgc
     2041 atcaacgatc agcgtcgcat cgggcacagc tgtgcgaatt gccaccatcc gctcactaat
     2101 aagatggtta tccagcttca ctttcagtaa tttcgcgcct gcctgccaga gtgttgatgc
     2161 actattggcc atctgatcag gcgtaccgat gactaccgtc tgtgcagtga taactgtctc
     2221 gggaagcgtt atgccgatca aatcagccag cgattgctgc tgttttcgcg cggccagatc
     2281 ccacaatgca caatccagcg cattacgtgc tgcgccggca gggagaattt tttgcaactc
     2341 ctcccgtgtc agccctttct ctaattgcga cacgacgctc ataatttgcg ccattaccga
     2401 ggcatcactt tctccataac gcggatacgg cgtgcattcg ccggtgcctt taataccctc
     2461 ttcttccagt tcaaccacca ccacgcgcgc ttcactgcga cttccccggg caatcacaaa
     2521 cggggtatgt aagggctagg cttcctcaaa taccttaacg gttctcatct ttactccttg
     2581 ttgtcgcggt ggtctgcgga ttaagcgcaa atagcgtttg ctgtgttatt gacagttagc
     2641 ataaactagg tgtgacgtta actatatgta aacaggaaag ataatcatgt cacaaaccgt
     2701 tcatttccag ggcaacccgg ttacagtcgc caattccatc ccgcaggcgg gtagcaaagc
     2761 gcagactttt actctcgtgg caaaagatct gtctgacgtc accctcggtc agtttgcggg
     2821 taaacgcaaa gtgctgaaca ttttcccgag tattgatacc ggtgtttgcg ccgcatcagt
     2881 acgtaagttt aaccaactgg caaccgagat cgacaacacc gttgtgctgt gtatttctgc
     2941 cgatctgccg ttcgcccagt ctcgtttctg cggcgcagaa ggtctgaaca acgttatcac
     3001 cctctccact ttccgtaacg ctgaatttct gcaagccttc ggtgtggcaa ttgctgatgg
     3061 cccactgaaa ggtctggcag cgcgtgccgt tgtggttatt gacgaaaatg acaatgtgat
     3121 tttcagccag ctggtggatg aaatcaccac cgagccggat tacgaagcag ctctggctgt
     3181 actgaaagca taagttaata tgcctgatgg tgttgcacca tcaggcatat tcgcgcttac
     3241 tcttcgttct tcttctggct taagccatat tcccgcaact tattggcaat cgcggtatgt
     3301 gaaacgccga gacgttttgc cagtttgcgc gtgctgggat aattgcgata aagctgggtt
     3361 aataccgagc gttcaaaacg gctggtgatt tcgtccagcg aaccttccat cgcatcttcg
     3421 cccacggcta ccgttgcggc gtcataatcc ggcaacaaaa tatcctgtgg acgcagctca
     3481 taaccgtcca gttgtgtcag tgcgcgatat atagcgttct ttaactgccg cacatttccc
     3541 ggccacgcat aacgcgtaag tacagtattc aggtcagcgg ccagtttcgg acgcggcacg
     3601 ccctgctcgt cggcaaagcg ggcgacgaac agctcagtta acggcatgat gtcctgcgga
     3661 cagtcacgta gcggcggcag attgagcgtc aacacgttca gacgataata gagatcttca
     3721 cggaacatgc ctttttgcac cagttcgacc agattcttct gcgtagcgca aatcacccgc
     3781 acatcgacat gcacctcatg gtcttcgcca acccgacgga aagtgccatc attaagaaaa
     3841 cgcagtaatt tcgcctgcat ccgtggtgac atttccccta tttcatccaa cagcaccgaa
     3901 ccaccgttcg cctgctcaaa gaatcctttc ttcccttccg gagcatgacc aaacagttca
     3961 ctctcgaccg catcttccgg tatagacgca cagttcagcg ccaggtaagg tttgcccgct
     4021 ctggggcttg cctgatggca ggcgtaggca aagagatctt tacctgtacc tgtgtcaccc
     4081 gtaatcagca gcggcgcgct tagcatcgcc agtttctgcg cctgttcgac aacatgcttc
     4141 attttcgggc tgacggcgac aatttgactg aaggcgctga cgtcctgggc ggcgacattt
     4201 tgcaactggc ggcccatacg aatcgttgat cgcaacatca ccaccgcacc ggtcaggacg
     4261 tgttgatcat tttcatcctg aagataaaca ggcgtaatct ccatcaggaa attctgccca
     4321 ttaataacga catgctcgtt atgcgaatct tgcggttcgc tttccagcca acgtaaaaaa
     4381 ttaaagccgt taatcaattg tgcggcggta tggttgcgca ggcgatccaa tttttgccca
     4441 aaaagctgac agctcgccgg gttcgccata tccactttgc ttttcatatc gacagagagc
     4501 acaggttcgg gcaacgcctc cagtaacgcg ctcaacgcca gatgctcacg ttcggaaggc
     4561 atccacggga cagtacgcac atcggtaaca cctgcaatac ggcgtatttc ggccatcaga
     4621 ctgctgaaac tctcaaactc cagttcagca aaattgaggt agattcgccc aatgggatca
     4681 atctcaatac cgcgtaaatc aatgcctctt agcacgagta gatcgagtaa ttcgcgggtc
     4741 agaccgagtc ggtcttcaca aaagacttcc agacgcatgg gaaccttcac ctgaaaaaag
     4801 aacaattaat atgatgatat gacactattt ggatagcagg aaggtttctg tcaacaatca
     4861 ttgacacaaa gacggaaaaa cgggcacttc ggcgtaaaga tatccggtca gcacccgata
     4921 ttgcattatt tttcgctggg cgttttgcct ttttgcagcg tttctttcac ctgaccgata
     4981 agctgacgac ggaaatcccc gaggcgaggt ttgtcatcgt caatccacgg cagcgggcgg
     5041 caaagctcca tagctttaat cccgagtcgt gccgtcagaa gtccagcacc aattccctga
     5101 gctgcgcggg tagacaaacg agcagcgaga tcttgcgaca tccagtccat ccccacttcg
     5161 cgcaccagtt cgctggctcc ggcaaaagcg atattcagca ataccagctt aaacagacgc
     5221 aaacggctgt aataccccag ttcaatgcca tacagcgtgg cgatgcgatt aattaaacgc
     5281 agattgcgcc aggcgataaa cgccatatcg accaacgcca gcgggctgac cgcaatcatc
     5341 aacgttgatt ccgccgccga acggcagatt tcgcgccgcg cctgggcatc taaaactggc
     5401 tggaccaaat gcgcatacaa actgaccact tcacggtcgt tttgcgtttc atggattgag
     5461 gcataccagc gttgcagcgc tggatgagac tgatcaatac ccgcctgctg cgccagtttt
     5521 tcgcaaaatg cgcggccttt gcccgtgccg tggctgtgca acaaatcgcg cgcttcgtcg
     5581 cgttcatggg cgcgctgtcg caagcgccat aagcgccgcc actctgttac cacagaacct
     5641 acgccagcgc cgataatcaa tgccccagcg gcacatccac ccagcgccac ccagtcctga
     5701 gtttgccagg cattcattgt ccactgtaca ccctgcccga caacgcttgc gccaaacaga
     5761 gccagcccgc ccatcaccat tttgcgccac aggctgcgtt tcggacgtaa cgctgcatcc
     5821 attaccgctt caacttgccc ctcttcttca ggcgcttcat cgagcgtggc cggggcaaaa
     5881 ttttgcgcct gattttcgtc aaaggtctgc tgcgccctga attttggatt ctgatcgacc
     5941 tccagcggac cgtcgaaatc aatacgtggt tttaacggtt cggtcatcgc aatttatctc
     6001 ctattaaaaa ttccagcgcg gcatcaagac gaatatgcgg cagcggtttg tcgacatcca
     6061 tcacctgcgg gcgaaacgct tcaaactgga acccttgttt gtcccagaac gcctgaccgg
     6121 gcaaacgcgc aggaacttca ccgggataaa cggtgagtgg cgcaccatcg ctgagccggt
     6181 taccgcgcaa tgccggaatt ttctcgccgt tgacgtcaat aatgccgctg gtggtcgcct
     6241 gcaccgaggc cagccccagg caatccatac taatcccttc aaacgccgca ttttgccagg
     6301 catcctgaat cagttgttgc agtaatgaaa ccatattggc gtgctgatcg atggtcacat
     6361 ggtccgcttt agtggcagca aacaatagct tatcgataac cggcgaaaac aaacgccgga
     6421 acaaggtacg ctgcccgtag tggaaacttt gcatcagctg cgtcagtgcc agacgcatat
     6481 cattaaatgc ctgtggccca ctgttgagag gttgcaggca atcaaccagc acaatctggc
     6541 ggtcaaagcg cagaaaatga ttcttataga accccttcac caccttctcg cagtaataat
     6601 taaaccgctc gcgcagcatt ccggcattgg tgtgcttatc ggcctgcgcc agtttggact
     6661 cgccccaggt atcgacatcc ggccacggga agaattgcag cgcgggcgca cctgccatat
     6721 ctcctggcaa gacaaagcgc cctggctgaa taaagtgcag cccctgctgt ttacagtggt
     6781 ggagataatc ggtccacgcg gcggcaatgt ctgccagccg gttttcgtcg gcaggtgcta
     6841 gcgggtccag cccttcgcac atcattcgcc atttgaccga ccattcgccg cgctgaccat
     6901 tgagtaagcc cgtcatctgg cgtgaccagc ttaaatagtc ctgcgccagc atcggcaggt
     6961 cgagcaacca ttcgccggga taatccacaa tctccagata cagcgtggag gtgtccttga
     7021 agtggcgtag cagcgaatcg ttcgatttaa aacgtagcgc caggcggatt tcactgacgc
     7081 cgcgcgttgg cgtcggccag gcgggaggat cgccatataa ctgcgccagt ccttcatcat
     7141 atgtgaagcg cggaatgcca aagtcacgct gaggaatgcg ttttacgccc agcaggcgct
     7201 cttcacgcac cgcgcttaac agcggcaagc gtgctccggc gtgaatattg agcaactgat
     7261 tgaccatagc agtgataaac gctgttttgc cgctgcggct tagtccggtt acggcgaggc
     7321 gcagatgtct gtcgacaccc cgattcacca gcgcattaag ttcattttta agtcgcttca
     7381 ttgctgtcct gtgctgctct gaagaccaga aaaaaatcat tcgtaaggat atgaatgtgg
     7441 gggccaggcc attgattatc aactgcccgt gttgtcatcg acgggcgaac tccataagat
     7501 gtgcagcatt cacgttcgga cggagt
//
LOCUS       DADMJE010000180         7472 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.183, whole genome shotgun sequence.
ACCESSION   DADMJE010000180 DADMJE010000000
VERSION     DADMJE010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7472
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.183"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..339
                     /locus_tag="JN001_003593"
     CDS             <1..339
                     /locus_tag="JN001_003593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HAY9054685.1"
                     /translation="QTEAFLNAYGLSRFAPLGYDPRDLPIRDLAGYRKKGNHDGDPII
                     FYTFPAAFEQEIAKGFNTKQFAEVLKNAGMLTPPTSGRGYQGRVREDGRQIRVYVLNF
                     MAEESSQPEE"
     gene            714..1148
                     /locus_tag="JN001_003594"
     CDS             714..1148
                     /locus_tag="JN001_003594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000126714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HAY9054686.1"
                     /translation="MTAQISAYGRLVADPQTRTTTNGNNMAMARLAVSLPCNAAEAGE
                     STFWLGVIAFGKQADALAKHQKGDLVSVAGNMQLNQWTGQDGGTQQGYQVVADSVISA
                     RTVRPGGKAGQRGQATDALRRAQQPSRDEYDQRPPFDDETPF"
     gene            1159..1800
                     /locus_tag="JN001_003595"
     CDS             1159..1800
                     /locus_tag="JN001_003595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054687.1"
                     /translation="MSTQPIIIEFGSYRWPRHLAIHEADHAIAAWFFGIQEVEIALSG
                     NNRVAKTYLSGDVDECGAVAVWHANYPRNVAEVKSYTLSNDDTRLRLIDQVCRAMVIS
                     LAGIVAQSRYTGDDINALMETSGKADMKNVRDLSEVYRVAGGEDADIQRISLSRAEAL
                     IALKWWDVIALAKILENRNHMPASNFQRIMGDIDKPVPKPMTLAELDELVGEE"
     gene            1797..2147
                     /locus_tag="JN001_003596"
     CDS             1797..2147
                     /locus_tag="JN001_003596"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054688.1"
                     /translation="MKPYILAAGLISSAPALSAIHCGGFTIQPDRYRTTINGDVVHIV
                     DAQFYGAPRDFSQAAIKLLPDAITTTDRQYRLETQGGNALLELMTRENPPRVLNRERC
                     DAGLTSFGWYTSAP"
     gene            2841..3452
                     /locus_tag="JN001_003597"
     CDS             2841..3452
                     /locus_tag="JN001_003597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001205651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054689.1"
                     /translation="MRDRTRSYTTDLPRIGLPFLANMRSRLADAEPGTQLYTQTESGT
                     LYAFRQADSYAMTINGVTRAIRTTTTKAGYGVREWYACPHCMKRAAKLYIGKKDIGCR
                     ACWKLHYKSQSADILDRMRMKIRQQRCAIWGSNDLANNLFNDIRMFPKPKGMRWATFD
                     RKRAELPVMEMAYWQAFSPVVDRITGVIERKAGKAARGIGLTL"
     gene            3684..3869
                     /locus_tag="JN001_003598"
     CDS             3684..3869
                     /locus_tag="JN001_003598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002436675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054690.1"
                     /translation="MTPREIALLTIAKLEHGGHQLTQADQREIERSVNADIARRDRFR
                     EMMRAPAYQWKKPAPRR"
     gene            3990..4532
                     /locus_tag="JN001_003599"
     CDS             3990..4532
                     /locus_tag="JN001_003599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016244020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid pRiA4b ORF-3 family protein"
                     /protein_id="HAY9054691.1"
                     /translation="MYQLKITIRDSKPPIWRRVLVPEQIPFSELHAVIQLAFGWNDEH
                     LYMFEKGRKGDPGSEYRVWGEDESMGNAAITPLWAALQNDGDKLVYTYDFGDWWDCVI
                     VLEKQTHDTSNQPISCLRGKGTTPVENSGGLHGYNELLLQARESDNPEQAEIHNFLML
                     DIERRVYDLSSINDRLQTLN"
     gene            complement(4525..4884)
                     /locus_tag="JN001_003600"
     CDS             complement(4525..4884)
                     /locus_tag="JN001_003600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004202368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054692.1"
                     /translation="MRMTSRKKEILSYFEPDNLEWVTGEIGAPPFDVSGVAYLLHGMV
                     SFDKRHQLESTRRTLESMVAGGLLERVTVYESRQIRRGGETNATVVRYGLPGQCAVMR
                     DTGGADNAISGEYMRVS"
     gene            5318..6142
                     /gene="dinD"
                     /locus_tag="JN001_003601"
     CDS             5318..6142
                     /gene="dinD"
                     /locus_tag="JN001_003601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312547.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA damage-inducible protein D"
                     /protein_id="HAY9054693.1"
                     /translation="MNEHHQPFEEIRHYGTEGQEFWSARELAPLLDYRDWRNFQKVLA
                     RATQACEASNQAASDHFVETTKMVVLGSGAQRELEDVHLSRYACYLVVQNGDPAKPVI
                     AAGQTYFAIQTRRQELADDEAFRQLREDEKRLFLRNELKEHNKQLVEAAQQAGVATAI
                     DFAIFQNHGYRGLYGGLDQKAIHQRKGLKKNQNILDHMGSTELAANLFRATQTEEKLK
                     RDGVNSKQQANTTHFDVGRKVRQTIQELGGTMPEELPTPQVSIKQLENSVKITEKK"
     gene            6434..7051
                     /locus_tag="JN001_003602"
     CDS             6434..7051
                     /locus_tag="JN001_003602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312548.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimeric intracellular cation channel family
                     protein"
                     /protein_id="HAY9054694.1"
                     /translation="MLLHILYLVGITAEAMTGALAAGRRRMDTFGVIIIATATAIGGG
                     SVRDILLGHYPLGWVKHPEYVIIVATAAVLTTIVAPVMPYLRKVFLVLDALGLVVFSI
                     IGAQVALDMGHGPIIAVVAAVTTGVFGGVLRDMFCKRIPLVFQKELYAGVSFASAVLY
                     IALQHYVSNHDVVIISTLVFGFFARLLALRLKLGLPVFYYSHEGH"
     gene            complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JN001_003603"
                     /gene_synonym="yicF"
                     /pseudo
     CDS             complement(7048..7472)
                     /gene="ligB"
                     /locus_tag="JN001_003603"
                     /gene_synonym="yicF"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312549.2"
                     /note="this ligase is similar to LigA but it lacks the
                     C-terminal BRCT domain; catalyzes strand joining of nicked
                     DNA in the presence of a divalent cation and NAD+;
                     internal stop; incomplete; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-dependent DNA ligase"
BASE COUNT         1998 a         1836 c         1908 g         1730 t
ORIGIN      
        1 cagacggagg cgtttttgaa tgcctatggg ctgagtcgat tcgcgccgct gggttatgac
       61 ccgcgcgatt tacccatccg tgatttagcc gggtacagga agaaggggaa ccacgacggc
      121 gacccgataa ttttctacac cttcccggca gcgtttgagc aggagattgc aaagggcttc
      181 aataccaaac agtttgccga agttctaaag aatgcaggaa tgcttacacc accaacgagc
      241 gggcgaggct atcaggggcg agtaagggag gatgggcgac agattcgcgt ctatgtactc
      301 aatttcatgg cagaggaaag cagccagcca gaagaataat tatttcttca catgcgtagt
      361 tttagtgttg tctcggttgt ctttgttgtc tcaatttgta attgagattg atttataagg
      421 attttatttt aatttctgag acaacaccga gacaacattt agccattttg agacaacagg
      481 gcgaaagtgt gtttttagtc tggcaggcag tgagacaaca tttatgccgg gtgagacaac
      541 acgaaattgc aaatgttgtc tcagcaaaac ccagacgtgg cgcggcctgt agagccgtga
      601 gacaacaaag acaacagaga caacactatt tttgcttact atgaaaaaaa atcggcaggt
      661 gtcccacatt aagaaatcgt cattagcaaa actaataatc cagtgagggg aaaatgacag
      721 cacaaatttc agcatacggg cggctggtgg cagatcccca gacccgcacc acaacgaacg
      781 gtaacaacat ggctatggcg cggctggcgg tgtctctccc ctgtaatgcg gcagaggcgg
      841 gagagtcaac cttctggctg ggcgttattg cttttgggaa gcaggccgat gcgctggcaa
      901 agcaccagaa aggcgacctt gtgagcgtgg caggcaatat gcaactcaac cagtggacag
      961 ggcaggacgg cggtacacag caggggtatc aggtagtagc cgacagtgtg atcagcgcca
     1021 gaacggtacg ccccggcggg aaggcaggac agcggggaca ggcaacggac gcgctgagac
     1081 gtgcgcagca gccatcccgt gatgaatacg accaacgccc accattcgac gatgaaacgc
     1141 cattctgaga gggaagatat gagtacgcaa cccatcatta ttgagttcgg cagctatcgc
     1201 tggcccagac atcttgcaat acatgaagca gatcatgcga tagccgcatg gtttttcggc
     1261 atacaggagg tagaaattgc gttatcgggt aataaccgag tggcaaaaac ctaccttagc
     1321 ggcgatgttg atgaatgtgg agctgtcgcg gtatggcacg ccaactatcc acggaatgtg
     1381 gctgaggtta agtcttacac cctctcgaat gatgacacca ggttacgtct gatagaccag
     1441 gtatgccggg ctatggttat atctctggct ggtatcgtcg cgcaatcacg ctatacgggg
     1501 gatgatatta acgcactgat ggaaacgtcc gggaaagcag acatgaaaaa tgttcgtgat
     1561 ttatcagagg tataccgggt ggctggtggg gaggatgctg atatacagag aatatccctt
     1621 tcccgtgctg aggcgctgat tgccctgaaa tggtgggatg ttatcgcgct ggcgaaaata
     1681 ctggagaacc gtaaccatat gcctgccagc aacttccagc gcattatggg tgatattgac
     1741 aagcctgtac caaagcctat gacgctggct gaactggatg aattggtggg tgaagaatga
     1801 agccatacat tctggcagcc ggcctgatct cctcggcacc ggcactatct gctatccatt
     1861 gtgggggctt taccatacag ccagaccgtt atcggacaac gattaacggc gatgtggttc
     1921 atattgttga tgcgcaattt tacggcgcac cgcgagactt tagccaggcc gccataaagt
     1981 tattgccgga tgccattacc actaccgata ggcaataccg cctagagacg cagggaggca
     2041 atgccttgct tgagttgatg accagagaaa acccgccacg tgtgcttaat cgtgagcgct
     2101 gcgatgccgg gttaacaagt ttcggttggt acacttctgc gccgtgatgt tcgttccgag
     2161 cgcagcctaa aatattggac tgttcttgac ggatttaaaa ctctaatgga gccaagtcct
     2221 tgccagtagc gggctaggag cctaattgtg attcaggtcg tcaaaaatat tcaggtttgc
     2281 ggcattggtt cgcagtacgc agtccggtac gcggcaaaac tgcgcattta acgtgcgtac
     2341 cacctgacga attctaacgc cggcattgca aacagatgcg tgcgcaaaat ggctaagacg
     2401 tctgatattg ctggctttgg ctcaatcagt ttggaggtgg cggtatcagt acgatgctaa
     2461 tttttgctaa ggttttagta cgcaactcag gtacgcactc tcaccagata cgaaaccgat
     2521 tcgcagttgc gtaccagcct gtaaggcgca ttatcgctgg gtttctacag tcgaatgcag
     2581 tacgcaaagt ggaaaatcct ccgaatacga aacccgagca ttgcgcagta aattgcgaat
     2641 tgcgcagtta acaaaatatc tccgcaaaac gaaacggata tcaatgcgca aaccatcctc
     2701 aacccccgcg cggttactgg ctttattgat gtgaaattgc aaaattggtg cgcaatttac
     2761 agtaaaatac gcatattatt tcgtattcaa tttgcgcacc gttcgcagtt aatgcgcagt
     2821 aattcgcagg aggccagcca gtgagagaca gaacgcgcag ctataccacc gacctgcccc
     2881 gtatagggtt gccattcctt gcgaacatgc gtagcaggct ggcggatgct gaaccgggta
     2941 cgcagcttta tacccagacc gaaagcggaa cgttgtatgc cttccggcaa gccgacagct
     3001 acgccatgac aatcaacggc gtgacgcggg ctattcgcac cacaaccacg aaggccgggt
     3061 atggcgtccg ggaatggtac gcttgccccc actgtatgaa gcgggctgca aagctgtata
     3121 tcggcaagaa agacattggc tgccgggcgt gctggaaact tcactataaa agccagagtg
     3181 ccgacatact ggacaggatg cgcatgaaga tacgccagca gcgatgcgcg atatggggca
     3241 gcaatgacct tgccaataat ctgtttaatg acattcgcat gttcccaaaa ccaaagggga
     3301 tgcgctgggc tacgtttgac aggaagcggg cagagttacc agttatggag atggcttact
     3361 ggcaggcatt cagcccggta gtggacagaa tcacgggcgt tattgagcgt aaagcaggaa
     3421 aagcagccag aggcattggc ctgactctat aaaagcaaaa cgcccgcacg gggcgtcaga
     3481 gaacgggata gacttctgcg acaatttgca ttcgccgcca atatagcaag ccgtccacat
     3541 caagcaataa actatcaccg ggagggggag gccaaatctc tgcaatcctg agccttaagg
     3601 actgcccgcc ccatcgtttt ttcatacccg cgaaaaatga aatttaatcc gggcgtgttt
     3661 catccttcca gagggtatga cgtatgacac cacgcgaaat agccttattg accatcgcca
     3721 aacttgagca tggaggccac cagcttacac aggcagatca acgggagata gaacgctcag
     3781 ttaatgccga tatagcccgg cgcgacaggt tccgcgaaat gatgcgagca cctgcctacc
     3841 agtggaagaa gccagcgccg cgcaggtaga tacgggatta ttccgcatgt aacttatgcg
     3901 tattaagcaa atttccttta ttcaccttta cagaattgtg agtacgtcag tatcgttatc
     3961 cttccgattc gcatttattc aggatttgca tgtaccagct aaagataacc atccgagaca
     4021 gcaaaccacc tatatggcgg cgtgtgctgg ttccagagca aatccccttt agtgaacttc
     4081 acgcggtgat ccagttggct tttggctgga atgacgaaca cctgtatatg ttcgagaaag
     4141 ggcgtaaagg tgatcccggt agcgagtatc gcgtatgggg tgaggatgaa agcatgggta
     4201 atgcggcaat cacaccacta tgggcagcgc tccagaatga tggtgacaag ctggtttaca
     4261 cgtatgactt tggcgactgg tgggattgcg tcattgtgct ggagaagcaa acacacgata
     4321 cgagcaatca gcccattagc tgcctgcgtg ggaaaggcac caccccggtg gaaaactcag
     4381 gcggcttgca tggttacaat gaattgctat tacaggccag agagtctgat aatcctgagc
     4441 aggccgagat ccacaatttc ctgatgctgg atattgagcg ccgggtttac gacctgagca
     4501 gcatcaacga cagattgcag actcttaact gacccgcata tattcgcctg atattgcgtt
     4561 atcagcgccg ccagtatcgc gcataacagc gcactgaccg ggcaaaccgt agcgcacgac
     4621 cgttgcgtta gtctcaccgc cgcgccgtat ctggcgcgat tcatacactg tcacccgctc
     4681 aagcagtcca ccagcaacca tgctttccag tgtgcgccgg gttgattcga gctggtgacg
     4741 cttatcgaac gacaccatgc catgaagcag gtaggccaca cccgacacat cgaacggcgg
     4801 cgcaccaatc tcaccagtca cccattcgag gttatccggt tcaaagtagc taagtatctc
     4861 ttttttgcgg ctggtcattc tcatagctgg caggttcctt attgtgggat agcactatca
     4921 tacaataagg cgcaaaagat aagaggccag aacagcaagc atgagagcat aaaacgagca
     4981 gccaaagaca gcgcctcaaa ataccgtgta cacaagggtg tacctactga gaaaacgcat
     5041 tacaagaaac acagcaacca cgggcgttta aagccactac tcaataaaca gattcaactc
     5101 gtaacgccaa ttcttacttt tcagccttca caaatgccgc ccactcaaac agagcggcat
     5161 ttttcttccc cgcaacttca attctgtttt gcgtgcctgc tccagatttt gcgatgtttt
     5221 tttgcccagc acactgagaa cgtgagatac tcacaactgt atataaatac agttacagat
     5281 ttactttctt tgcaatcgat atcacatgga gtgggcaatg aacgaacatc atcaaccttt
     5341 tgaagaaata cggcattatg gcactgaagg gcaagaattt tggtcagcta gagaattggc
     5401 accgttactg gattatcggg actggcgcaa ttttcaaaag gtactggccc gcgcgactca
     5461 agcgtgcgaa gccagcaatc aagctgcatc tgaccatttc gttgaaacca ccaaaatggt
     5521 tgtattaggt tcaggggctc aacgagaact tgaagatgtt catctctccc gctatgcctg
     5581 ttacctggta gtacaaaacg gcgaccctgc gaaaccggtt attgcggcag ggcaaactta
     5641 ttttgctatc cagacccgac ggcaggagct ggctgacgat gaagctttca ggcaacttcg
     5701 tgaagacgaa aagcgtcttt ttctgagaaa tgaattgaaa gaacataaca aacaattggt
     5761 tgaggcagcg cagcaagctg gggtagcgac agctatcgat ttcgccatat ttcagaatca
     5821 tggttaccgg gggctgtatg gtggattaga tcagaaagct attcatcagc ggaaggggct
     5881 gaaaaagaat cagaatatcc tggatcatat gggttcaaca gaactggcgg ctaatctctt
     5941 tcgagctacc caaacagaag aaaaactcaa gcgggatggc gtgaattcaa aacagcaagc
     6001 aaacaccaca cactttgacg tgggtcgcaa ggtgaggcaa accattcagg aacttggcgg
     6061 aaccatgcct gaggagttgc cgaccccgca ggtcagcatc aagcagttgg aaaacagtgt
     6121 aaaaattaca gagaagaaat agcagaaact aaaaactctt tttcttaatt gagatacccg
     6181 atgcgtaagc caaagtccag gtgcagtgaa cacaatggct aaacattgca cctttctttt
     6241 ccacccctca attttaacct attttttctt atgcattttc tcagacaaga actcagaata
     6301 atgcatctac gctacagaaa atagcgattt cacataacta caagttatca atttcctctt
     6361 accttaaaaa atctcaatcg tgacaatgcg cacaaatcgc taccctgcca gacagatttt
     6421 tagggagaga accatgctgt tacacatttt gtatttggtt ggcatcactg ccgaagccat
     6481 gacgggggcg ctggcggccg gacgacggcg catggataca tttggcgtaa ttattattgc
     6541 gaccgccacc gcaattggcg gagggtcagt gcgcgatatt ctgctgggcc actatccgct
     6601 cggctgggtc aaacacccgg aatatgtgat tatcgtcgct accgccgcag tactcaccac
     6661 tatcgttgct cctgtaatgc cttacctgcg caaagtgttt ctggtgctcg atgcgctcgg
     6721 actggtggtc ttttctatca tcggcgcaca ggttgcactg gatatggggc acggcccaat
     6781 tattgccgtt gtcgcggcgg taaccaccgg cgtgtttggc ggcgttttgc gcgatatgtt
     6841 ctgtaaacgc atcccactgg tattccagaa agagttgtat gctggtgtct catttgcctc
     6901 cgccgtgctg tacatcgcgc tgcaacacta tgtttctaac catgatgtgg tgattatctc
     6961 caccctggta ttcggctttt ttgcccgctt actggcgcta cgtcttaagc tgggattacc
     7021 ggtcttttac tacagccacg aaggtcacta aggttcaaaa cctgtgatct gctgggcagc
     7081 cagccaactg cccagcttct tgatttgcgc attttccttc cattcaataa cctgtctggc
     7141 gcgcccagat ccagtccccg gcagctgctg tcagaactgc tccgtgctaa ataaaagttg
     7201 cgactaggac cgttcatcac tggcattaag cgccgcccgg gttagcggta ttcccattgc
     7261 catcacccag cgagtaaaag gctgcttacg agccagatta aactgatgcc ataactgcgc
     7321 acttttactt ttcgcgatcc ccggcgtgtt ctgtaattgc tctggcgtta ataaaagcca
     7381 agaaaagata tgctcaaagc gatgagtctg atgcagcgcg cgccaaccgg cctcaccaat
     7441 gccatccagc ccaagaacct gttttgaccc ca
//
LOCUS       DADMJE010000181         7435 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.184, whole genome shotgun sequence.
ACCESSION   DADMJE010000181 DADMJE010000000
VERSION     DADMJE010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7435)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7435)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7435
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.184"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            167..274
                     /locus_tag="JN001_003604"
     CDS             167..274
                     /locus_tag="JN001_003604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588455.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054695.1"
                     /translation="MPTKRFDKKHWKMVVVLLAICGAMLLLRWAAMIWG"
     gene            complement(327..1085)
                     /locus_tag="JN001_003605"
     CDS             complement(327..1085)
                     /locus_tag="JN001_003605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdiY family protein"
                     /protein_id="HAY9054696.1"
                     /translation="MKLLKTVPAIVMLAGGMFASLNAAADDSVFTVMDDPASAKKPFE
                     GNLNAGYLAQSGNTKSSSLTADTTMTWYGQTTAWSLWGNASNTSSNDERSSEKYAAGG
                     RSRFNLTDYDYLFGQASWLTDRYNGYRERDVLTAGYGRQFLNGPVHSFRFEFGPGVRY
                     DKYTDNASETQPLGYASGAYAWQLTDNAKFTQGVSVFGAEDTTLNSESALNVAINEHF
                     GLKVTYNVTWNSEPPESAPEHTDRRTTLSLGYSM"
     gene            1372..2301
                     /gene="pfkB"
                     /locus_tag="JN001_003606"
     CDS             1372..2301
                     /gene="pfkB"
                     /locus_tag="JN001_003606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416237.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase II"
                     /protein_id="HAY9054697.1"
                     /translation="MVRIYTLTLAPSLDSATITPQIYPEGKLRCTAPVFEPGGGGINV
                     ARAIAHLGGSATAIFPAGGATGEHLVSLLADENVPVATVEAKDWTRQNLHVHVEASGE
                     QYRFVMPGAALNEDEFRQLEEQVLEIESGAILVISGSLPPGVKLEKLTQLISASQKQG
                     IRCIVDSSGEALSAALAIGNIELVKPNQKELSALVNRELTQPDDVRKAAQEIVNSGKA
                     KRVVVSLGPQGALGVDSENCIQVVPPPVKSQSTVGAGDSMVGAMTLKLAENASLEEMV
                     RFGVAAGSAATLNQGTRLCSHDDTQKIYAYLSR"
     gene            2402..2692
                     /gene="ghoS"
                     /locus_tag="JN001_003607"
     CDS             2402..2692
                     /gene="ghoS"
                     /locus_tag="JN001_003607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type V toxin-antitoxin system endoribonuclease
                     antitoxin GhoS"
                     /protein_id="HAY9054698.1"
                     /translation="MASGDLVRYVITVMLHEDTLTEINELNNYLTRDGFLLTMTDDEG
                     NIHELGTNTFGLISTQSEEEIRELVSGLTQSATGKDPEITITTWEEWNSNRK"
     gene            2798..3658
                     /locus_tag="JN001_003608"
     CDS             2798..3658
                     /locus_tag="JN001_003608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructosamine kinase family protein"
                     /protein_id="HAY9054699.1"
                     /translation="MWQAISRLLSEQLGEGEIELRNELPGGEVHAAWHLRYAGHDFFV
                     KCDERELLPGFTAEADQLELLSRSKTVTVPKVWAVGADRDYSFLVMDYLPPRPLDAHS
                     AFILGQQIARLHQWSDQPQFGLDFDNSLSTTPQPNTWQRRWSTFFAEQRIGWQLELAA
                     EKGIAFGNIDAIVEHIQQRLASHQPQPSLLHGDLWSGNCALGPDGPYIFDPACYWGDR
                     ECDLAMLPLHTEQPPQIYDGYQSVSPLPADFLERQPVYQLYTLLNRARLFGGQHLVIA
                     QQSLDRLLAA"
     gene            complement(3699..4235)
                     /locus_tag="JN001_003609"
     CDS             complement(3699..4235)
                     /locus_tag="JN001_003609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054700.1"
                     /translation="MTYQQAGHIAVLKRILGWVIFIPALISTLISLLKFMNTRQENQE
                     GINAVMLDFTHVMIDMMQANTPFLNLFWYNSPTPNFNGGVNVMFWVIFILIFVGLALQ
                     DSGARMSRQARFLREGVEDQLILEKAKGEEGLTREQIESRIVVPHHTIFLQFFSLYIL
                     PVICIAAGYVFFSLLGFI"
     gene            4382..5050
                     /gene="hxpB"
                     /locus_tag="JN001_003610"
     CDS             4382..5050
                     /gene="hxpB"
                     /locus_tag="JN001_003610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexitol phosphatase HxpB"
                     /protein_id="HAY9054701.1"
                     /translation="MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRN
                     ELPDTLGLRIDMVVDLWYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVA
                     LCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAK
                     LGVDPLTCVALEDSVNGMIASKAARMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAK
                     DLLG"
     gene            5213..5803
                     /locus_tag="JN001_003611"
     CDS             5213..5803
                     /locus_tag="JN001_003611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707386.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HAY9054702.1"
                     /translation="MTAEGHLLFSIACAVFAKNAELTPVLAQGDWWHIVPSAILTCLL
                     PDIDHPKSFLGQRLKWISKPIARAFGHRGFTHSLLAVFALLATFYLKVPEGWFIPADA
                     LQGMVLGYLSHILADMLTPAGVPLLWPCRWRFRLPILVPQKGNQLERFICMALFVWSV
                     WMPHSLPENSAVRWSSQIINTLQIQFHRLIKHQVEY"
     gene            5936..7327
                     /locus_tag="JN001_003612"
     CDS             5936..7327
                     /locus_tag="JN001_003612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005120792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-cystine transporter"
                     /protein_id="HAY9054703.1"
                     /translation="MNFPLIANIVVFVVLLFALAQTRHKQWSLAKKVLVGLVMGVVFG
                     LALHTIYGSDSQVLKDSVQWFNIVGNGYVQLLQMIVMPLVFASILSAVARLHNASQLG
                     KISFLTIGTLLFTTLIAALVGVLVTNLFGLTAEGLVQGGAETARLNAIESNYVGKVSD
                     LSVPQLVLSFIPKNPFADLTGANPTSIISVVIFAAFLGVAALKLLKDDAPKGERVLAA
                     IDTLQSWVMKLVRLVMQLTPYGVLALMTKVVAGSNLQDIIKLGSFVVASYLGLLIMFA
                     VHGILLGINGVSPLKYFRKVWPVLTFAFTSRSSAASIPLNVEAQTRRLGVPESIASFA
                     ASFGATIGQNGCAGLYPAMLAVMVAPTVGINPLDPMWIATLVGIVTVSSAGVAGVGGG
                     ATFAALIVLPAMGLPVTLVALLISVEPLIDMGRTALNVSGSMTAGTLTSQWLKQTDKA
                     ILDSEDDAELAHR"
BASE COUNT         1866 a         1810 c         1837 g         1922 t
ORIGIN      
        1 attttcgata tatatgttga tgcataatat tattttttca taaaacgcag aaacagtgac
       61 caggtgtaca acgccaccca acggctgtaa taacaaaaaa tcccttgatg cccgtccctt
      121 ttgttacact ccgttatcac gcacaagaga tatgcaggac actggtatgc cgactaaacg
      181 ctttgataaa aaacactgga agatggtggt ggtgctactg gcaatctgtg gcgctatgtt
      241 gttgctacgt tgggcagcaa tgatttgggg ctgagcagtg acaaacgaag acagccagac
      301 cgcataacac ggtccggcag ataattttac atgctgtagc ccagcgataa ggttgtccga
      361 cggtcggtat gttccggtgc agactctgga ggttcagagt tccatgtaac gttgtaagtc
      421 accttcagtc caaaatgttc attaatagca acatttaatg cgctttcgga gttcagcgtt
      481 gtgtcttccg cgccaaagac cgaaacaccc tgcgtaaatt tagcgttgtc agtcaactgc
      541 catgcataag ccccggaggc atagcccagc ggctgagttt cactggcatt gtcggtatat
      601 ttgtcgtaac gcacacctgg accgaattca aagcggaaac tgtgtaccgg gccattcaaa
      661 aactgacgac cataacccgc ggtcaacaca tcgcgctctc gatagccgtt ataacggtct
      721 gtcagccagc ttgcctgacc aaataaatag tcataatcag ttaaattaaa gcggctacgc
      781 ccgcccgccg catatttttc tgaagaacgc tcatcattag aagaagtatt actggcgttc
      841 ccccacagcg accaggcagt ggtttgtcca taccaggtca tggtggtgtc agccgtaagt
      901 gaggagcttt tcgtattgcc tgattgtgca agatatcctg cgttcagatt accttcgaaa
      961 ggttttttag cgctggcagg atcgtccatg acagtaaaaa cggaatcatc ggcagctgca
     1021 ttcagtgacg caaacatgcc ccccgccaac ataacgatgg caggaactgt cttcaaaagc
     1081 ttcatttatc aagagtccgt acaacaaaaa aagagaccat cgcggtcccg gaaactttct
     1141 taaggatcaa agattagcgt ccctggaaag gtaacgaatt ataaaaaggc gcgaataact
     1201 tagcaatgta ttcttatttc attttttgaa taagcatgtg gcgaaaacag atttttattt
     1261 atatatattt atctgcaaaa ttttaaataa agctccaata aatcatattg ttaatttctt
     1321 cactttccgc tgattcggtg ccagactgaa atcagcctat aggaggaaat gatggtacgt
     1381 atctatacgt tgacacttgc gccctctctc gatagcgcaa caattacccc gcaaatttat
     1441 cccgaaggaa aactgcgctg taccgcaccg gtgttcgaac ccgggggcgg cggcatcaac
     1501 gtcgcccgcg ccattgccca tcttggaggc agtgccacag cgatcttccc ggcgggtggc
     1561 gcgaccggcg aacacctggt ttcactgttg gcggatgaaa atgtccccgt cgctactgta
     1621 gaagccaaag actggacccg gcagaattta catgtacatg tggaagcaag cggtgagcag
     1681 tatcgttttg ttatgccagg cgcggcatta aatgaagatg agtttcgcca gcttgaagag
     1741 caagttctgg aaattgaatc cggggccatc ctagtcataa gcggaagcct gccgccaggt
     1801 gtgaagctgg aaaaattaac ccaactgatt tccgcttcgc aaaaacaagg gatccgctgc
     1861 atcgtcgaca gttctggcga agcgttaagt gcagcactgg caattggtaa catcgagttg
     1921 gttaagccta accaaaaaga actcagtgcg ctggtgaatc gcgaactcac ccagccggac
     1981 gatgtccgca aagccgcgca ggaaatcgtt aatagcggca aggccaaacg ggttgtcgtt
     2041 tcccttggtc cacaaggagc gctgggtgtt gatagtgaaa actgcattca ggtggtgcca
     2101 ccaccggtga aaagccagag taccgttggc gctggtgaca gcatggtcgg cgcgatgaca
     2161 ctgaaactgg cagaaaatgc ctctcttgaa gagatggtcc gttttggcgt agctgcgggg
     2221 agtgcagcca cactcaatca gggaacacgt ctgtgctccc atgacgatac gcaaaaaatt
     2281 tacgcttacc tttcccgcta acaaaaacat tcccccagca ttgggggaat caccaccaac
     2341 ctgtcggcaa cgcgtttctc cgactatgct caaaagtcat gtgataacaa aggggtgaac
     2401 tatggccagt ggcgatcttg tccgttatgt cataaccgtc atgttgcatg aggatacatt
     2461 gactgaaatt aacgagttga ataattacct gactcgcgac ggttttttgc tcaccatgac
     2521 ggatgatgag ggaaatatcc atgagctggg gactaacact tttggactta tcagtaccca
     2581 aagtgaagaa gaaattagag aactggtttc ggggcttacc caaagtgcaa ccggcaaaga
     2641 tcctgaaatc accatcacga cctgggagga atggaatagc aacagaaaat aaatggtttt
     2701 tgggcaataa tcagtctgtg gtgtgcgtta gctcgtgttt ttacaccgca ttcttgcgct
     2761 aaccttatga tctggcagac aacatgggag agacatcatg tggcaggcaa tcagtcgtct
     2821 tttgagcgag cagttaggtg aaggcgaaat cgaactgcgt aatgaactgc ctggcggaga
     2881 agtccatgcc gcatggcatt tgcgctatgc aggacatgac tttttcgtca aatgtgatga
     2941 aagggaactg cttcccggtt ttaccgccga agccgaccaa ctggagttac tgtcgcgtag
     3001 taaaaccgtc accgtgccta aggtttgggc agtaggcgct gaccgtgact acagttttct
     3061 ggtgatggat tatctcccac ctcgtccgct ggatgcgcat agcgcattta ttcttggtca
     3121 gcaaattgcg cgtttacatc aatggagtga ccaaccacaa tttggcctcg attttgataa
     3181 ctcgctctcc acaactccac agcccaacac ctggcaacgt cgctggtcaa cgttttttgc
     3241 tgaacaacgg attggctggc agttggaact ggcagcagag aaagggatcg ctttcggcaa
     3301 tatcgacgcc atcgtcgagc atattcagca gcgtctggcc tcgcatcaac cgcagccttc
     3361 tctgttgcac ggcgatttat ggtccggcaa ctgtgcgctg ggtccggatg gcccgtacat
     3421 tttcgaccct gcctgctact ggggtgaccg agagtgcgac ctggcgatgt taccgctgca
     3481 tactgaacag ccgccacaaa tctatgacgg ctatcagtca gtatccccgc tacctgccga
     3541 tttccttgaa cgtcaaccgg tttaccaact ctacacgctg ttaaatcgtg caaggttatt
     3601 tggcggtcag catttggtta ttgctcagca gtcactggat agattattag cagcatgata
     3661 tgggttgaag ataatggccg ctctgtgcgg ccttttgatt aaataaaccc aagcagagaa
     3721 aagaacacat aacctgcagc aatacaaata accggcagga tatacagtga gaaaaactgc
     3781 aggaaaatag tatggtgcgg aacaacaata cgggactcaa tttgttcacg cgttagcccc
     3841 tcttcccctt tggctttttc cagaatgagt tgatcttcaa caccttcccg caagaagcgc
     3901 gcctggcgac tcattcgggc accggaatcc tgcaacgcca gtccgacaaa aatcaggatg
     3961 aaaatcaccc agaacataac gttcacgcca ccattaaaat tgggcgtcgg ggagttatac
     4021 cagaacagat tcaaaaaagg cgtattcgcc tgcatcatat cgatcatgac atgagtaaag
     4081 tcgagcatga ccgcattaat gccttcctgg ttttcctgcc gggtattcat aaatttcagc
     4141 aaagaaatca atgtagagat caatgcaggt ataaaaatca cccaacccaa aatccttttc
     4201 aaaacagcaa tgtgtccagc ttgttgatac gtcatgagtt ctccttgatt aagacgcgtc
     4261 gtttcactta gtttacctgt agatatctgt tttcgcccat tctttaaagg cgatatgata
     4321 ggcgcttaat cataagcacg gcttaatacc ttacacataa tgctctaaag gagaggttgt
     4381 aatgtcaacc ccgcgtcaga ttcttgctgc aatttttgat atggatggat tacttatcga
     4441 ctcagaacct ttatgggatc gagccgaact ggatgtgatg gcaagcctgg gggtggatat
     4501 ctcccgtcgt aacgagctgc cggacacctt aggtttacgc atcgatatgg tggtcgatct
     4561 ttggtacgcc cggcaaccgt ggaatgggcc aagccgtcag gaagtagtag aacgggttat
     4621 tgcccgtgcc atttcactgg ttgaagagac acgtccatta ttaccaggcg tgcgcgaagc
     4681 tgttgcgtta tgcaaagaac aaggtttatt ggtgggactg gcctccgcgt caccactaca
     4741 tatgctggaa aaagtgttga ccatgtttga cttacgcgac agtttcgatg ccctcgcctc
     4801 ggctgaaaaa ctgccttaca gcaagccgca tccgcaagta tatctcgact gcgcagcaaa
     4861 actgggcgtt gacccactga cctgcgtggc gctggaagac tcggtaaatg gcatgatcgc
     4921 ttctaaagca gcccgcatgc gttccatcgt cgttcctgcg ccagaagcgc aaaatgatcc
     4981 acgttttgta ttagcaaacg tcaaactctc atcgctgaca gaactcaccg caaaagacct
     5041 tctcggttaa tgaccagggg cagtgatcac gctgcccctg gttctttatc tgaatttgca
     5101 ttcaactgac ggattaatcg tcaatttaag agaaagagtt acaccgtcac cacttccgtg
     5161 cactgtataa aaatcctata ctgtacgtat cgacagttta gtgagtttta tcatgacggc
     5221 ggaaggtcac cttctctttt ctattgcttg tgcggtattt gccaaaaatg ccgagctgac
     5281 gcccgtgctg gcacagggtg actggtggca tattgtccct tccgcaatcc tgacgtgttt
     5341 gttaccggac atcgatcacc caaagtcgtt tcttgggcag cgattaaaat ggatatcaaa
     5401 accgatcgcc cgcgcttttg ggcatcgtgg ttttacccac agtctgctgg cggtatttgc
     5461 gctgctggca accttttacc ttaaggttcc ggaaggctgg ttcattccgg ctgatgcgct
     5521 acaaggaatg gtgctgggtt atttgagcca catacttgcc gatatgctga cacccgccgg
     5581 tgttcccctg ctctggccat gccgctggcg tttccgcttg cctatcctag ttccccaaaa
     5641 gggcaaccaa ctggaacgtt ttatctgtat ggcattattt gtctggtcgg tatggatgcc
     5701 ccattcatta cccgagaaca gcgctgttcg ttggtcatcg caaataatca ataccttgca
     5761 gatccagttt catcggctta ttaagcatca ggttgaatac taaaaagaca aaaatcacct
     5821 ttctggaata agcaattcca tttgaatata agagccagct cacagttctg ttaatcttgc
     5881 gccaacacta tgactgctac gcagtgatag aaataataag atcaggagaa cggggatgaa
     5941 ctttccatta attgcgaaca tcgtggtgtt cgttgtactg ctgtttgcgc tggctcagac
     6001 ccgccataaa cagtggagtc tggcgaaaaa agtgctggtg ggtctggtga tgggtgtggt
     6061 ttttggcctt gccctgcata ccatttatgg ttctgacagc caggtactta aagattctgt
     6121 acagtggttt aacatcgttg gtaacggcta tgttcaactg ctgcaaatga tcgttatgcc
     6181 gttagtcttc gcctctattc tgagcgcggt tgcccgtctg cataacgcat ctcagttagg
     6241 caaaatcagt tttctgacca tcggtacgct tttgtttacc acgctgattg cggcgctggt
     6301 cggtgtgctg gtcaccaacc tgtttggttt gacggctgaa ggtctggttc agggtggtgc
     6361 agaaactgca cgtctgaacg ccattgaaag taactatgtt ggtaaagtct ctgatctgag
     6421 cgttccgcag ctggtcttgt cctttatccc gaaaaacccg tttgccgatc ttaccggagc
     6481 caatccgacg tcaattatca gcgtggtaat ttttgccgca ttcctcggcg tagctgcatt
     6541 gaaactgctg aaggatgatg cgccgaaagg tgaacgcgtc ttagccgcta tcgataccct
     6601 acaaagctgg gtgatgaaac tggttcgcct tgtcatgcag ttgacccctt acggcgttct
     6661 ggctctaatg accaaagtgg ttgcaggttc taacttgcaa gacatcatca aactgggaag
     6721 tttcgttgtc gcgtcctacc tcggtctgct gattatgttt gcagtgcatg gcattctgct
     6781 gggcattaat ggcgtgagtc cgctgaagta cttccgtaag gtatggcctg tgctgacgtt
     6841 tgcctttacc agccgttcca gtgctgcgtc tatcccactg aatgtggaag cacaaacgcg
     6901 tcgtctgggc gttcctgaat ccatcgccag tttcgccgcc tctttcggtg caaccattgg
     6961 tcagaacggc tgcgccggtt tgtatccggc aatgctggcg gtgatggttg cgcctacggt
     7021 tggcattaac ccgctggacc cgatgtggat tgcgacgctg gtcggtattg ttaccgttag
     7081 ttccgcaggc gttgccggtg tcggtggtgg tgcaactttc gccgcactga ttgtgctgcc
     7141 tgcgatgggc ctgccagtaa ccctggtggc gctgttaatc tccgttgaac cgcttatcga
     7201 catgggccgt acggcgctaa acgttagtgg ctcgatgaca gctggcacgc tgaccagcca
     7261 gtggctgaag caaaccgata aagccattct ggatagcgaa gacgacgccg aactggcaca
     7321 ccgttaattc ttatgctggc aatggtccgt tttgtatagg ggccgttgct ttacttttta
     7381 aatgttccat cgcggcgatg catactgact catatttaaa cagatcgtca gcgaa
//
LOCUS       DADMJE010000182         7408 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.185, whole genome shotgun sequence.
ACCESSION   DADMJE010000182 DADMJE010000000
VERSION     DADMJE010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7408
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.185"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..1458
                     /locus_tag="JN001_003613"
                     /pseudo
     CDS             1..1458
                     /locus_tag="JN001_003613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709462.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
     gene            1469..2542
                     /locus_tag="JN001_003614"
     CDS             1469..2542
                     /locus_tag="JN001_003614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001685709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9054704.1"
                     /translation="MNKYIKQWCFAVFMLSLSSVALAAPKGICTPDNGVFHSTLDFSG
                     YLITANENKVGTTFNTTVTNGSSYPGRCHCDTGNVGEFPYIYYTSKINQALTYAGVHS
                     NINYYDLNPNLDVGIAIDILGVGYVNAPFEYHANNPSGNTKYNCNRIEPLSISSGAKA
                     IVYFYIKKTFAGKLIIPETKIVTLYGTISRDTPVDYSQPMANVYIRGDITAPQSCEIN
                     NLQPVYFDFKEIPAADFSSVVGSAVITHKITKTVTIECENLGILNTDDISTSFYATEP
                     NTDNSMVVTSNSNVGIKIYDKNNKEIKVNGGELPTDMGKSTVYGEKLGSVTFSAAPAS
                     LTGARPAPGQFTATATITVEIVR"
     gene            2790..3830
                     /gene="pstS"
                     /locus_tag="JN001_003615"
     CDS             2790..3830
                     /gene="pstS"
                     /locus_tag="JN001_003615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein PstS"
                     /protein_id="HAY9054705.1"
                     /translation="MKVMRTTVATVVAATLSMSAFSVFAEASLTGAGATFPAPVYAKW
                     ADTYQKETGNKVNYQGIGSSGGVKQIIANTVDFGASDAPLSDEKLAQEGLFQFPTVIG
                     GVVLAVNIPGLKSGELVLDGKTLGDIYLGKIKKWDDEAIAKLNPGLKLPSQNIAVVRR
                     ADGSGTSFVFTSYLAKVNEEWKNNVGTGSTVKWPIGLGGKGNDGIAAFVQRLPGAIGY
                     VEYDYAKQNNLAYTKLISADGKPVSPTEENFANAAKGADWSKTFAQDLTNQKGEDAWP
                     ITSTTFILIHKDQKKPEQGTEVLKFFDWAYKTGAKQANDLDYASLPDSVVEQVRAAWK
                     TNIKDSSGKPLY"
     gene            3917..4876
                     /gene="pstC"
                     /locus_tag="JN001_003616"
     CDS             3917..4876
                     /gene="pstC"
                     /locus_tag="JN001_003616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008806729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstC"
                     /protein_id="HAY9054706.1"
                     /translation="MAATKPAFNPPGKKGDIIFSVLVKLAALIVLLMLGGIIVSLIIS
                     SWPSIQKFGLAFLWTKEWDAPNDIYGALVPIYGTLVTSFIALLIAVPVSFGIALFLTE
                     LAPGWLKRPLGIAIELLAAIPSIVYGMWGLFIFAPLFAVYFQEPVGNIMSNIPIVGAL
                     FSGPAFGIGILAAGVILAIMIIPYIAAVMRDVFEQTPVMMKESAYGIGCTTWEVIWRI
                     VLPFTKNGVIGGIMLGLGRALGETMAVTFIIGNTYQLDSASLYMPGNSITSALANEFA
                     EAESGLHVAALMELGLILFVITFIVLAASKFMIMRLAKNEGAR"
     gene            4876..5766
                     /gene="pstA"
                     /locus_tag="JN001_003617"
     CDS             4876..5766
                     /gene="pstA"
                     /locus_tag="JN001_003617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HAY9054707.1"
                     /translation="MAMVEIQTTAALAESRRKMQARRRLKNRIALTLSMATMAFGLFW
                     LIWILMSTITRGIDGMSLALFTEMTPPPNTEGGGLANALAGSGLLILWATVFGTPLGI
                     MAGIYLAEYGRKSWLAEVIRFINDILLSAPSIVVGLFVYTIVVAQMEHFSGWAGVIAL
                     ALLQVPIVIRTTENMLKLVPDSLREAAYALGTPKWKMISAITLKASVSGIMTGILLAI
                     ARIAGETAPLLFTALSNQFWSTDMMQPIANLPVTIFKFAMSPFAEWQQLAWAGVLIIT
                     LCVLLLNILARVVFAKNKHG"
     gene            5857..6630
                     /gene="pstB"
                     /locus_tag="JN001_003618"
     CDS             5857..6630
                     /gene="pstB"
                     /locus_tag="JN001_003618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000063125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein
                     PstB"
                     /protein_id="HAY9054708.1"
                     /translation="MSMVETAPSKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGP
                     SGCGKSTLLRTFNKMFELYPEQRAEGEILLDGDNILTNSQDIALLRAKVGMVFQKPTP
                     FPMSIYDNIAFGVRLFEKLSRADMDERVQWALTKAALWNETKDKLHQSGYSLSGGQQQ
                     RLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARC
                     SDHTAFMYLGELIEFSNTDDLFTKPAKKQTEDYITGRYG"
     gene            6645..7370
                     /gene="phoU"
                     /locus_tag="JN001_003619"
     CDS             6645..7370
                     /gene="phoU"
                     /locus_tag="JN001_003619"
                     /EC_number="3.5.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HAY9054709.1"
                     /translation="MDSLNLNKHISGQFNAELESIRTQVMTMGGMVEQQLSDAITAMH
                     NQDSDLAKRVIEGDKNVNMMEVAIDEACVRIIAKRQPTASDLRLVMVISKTIAELERI
                     GDVADKICRTALEKFSQQHQPLLVSLESLGRHTIQMLHDVLDAFARMDIDEAVRIYRE
                     DKKVDQEYEGIVRQLMTYMMEDSRTIPSVLTALFCARSIERIGDRCQNICEFIFYYVK
                     GQDFRHVGGDELDKLLAGKDSDK"
BASE COUNT         1864 a         1716 c         1933 g         1895 t
ORIGIN      
        1 agatgttgat gtcagcgtgg gtgaattgcg cgatgaagac ggatttacac cggacgtcct
       61 tcaggcgcaa atacttcatg gtttttccca cgggatcact ttatatggag gtatgcaggc
      121 tgctgaaaat tatggttctg cagctctggg tgtcggtaaa gatcttggcg ctttgggcgc
      181 aatttctttc gatgtgacac atgctcgtgc gaattttagc catgatgata cagaaacggg
      241 tcagtcatat cgctttctct attcaaaacg atttgacgac acagacacta gcttgcgcct
      301 ggttggctat cgttactcca ccgagggcta ctataccctc aatgagtggg catcgcggcg
      361 caacagccct gaagactttt gggaaacagg taaccgacgt agtcgcgtgg agggaacgct
      421 aacgcagtcg ttggggagag attatggcaa tttatacctg acattaagcc ggcaacaata
      481 ctggcatacc gatgatgtcg aacgattaat gcaatttggc tacagcagta gctggaagcg
      541 tctctcgtgg aacgtctcct ggagttattc caatactgcc agacagggga cggggaacaa
      601 ccatgccagt gataacacca gtgagcagat ctacatgctc tctttatctg ttcctttatc
      661 gggctggtgg ggtaatagtt acgccaccta ttctgtttcg caaaacgata attccggtag
      721 ctcacatcaa gcggtacggc gctggaaaga aataaccttt catggaattt aatgcagtcc
      781 tataacagtc atgatgatga ggttggcggt aatatgtccc tgacctatga tggctcttat
      841 ggcacggtga acggcagcta taactacagc caaaattccc agaggctgaa ttatggtatc
      901 agagggggaa ttctggcaca cagcgaaggg gtaacgttaa gtcaggagtt aggtgaaact
      961 attgctcttg ttaaagcacc tggggccgcc gggttagaaa tagataatat gcgcggtgct
     1021 gcgacggact ggcgcggcta tacggtcaag acacagctaa acccttatga tgaaaatcgg
     1081 gtagcaatca gcgataacta tttctcgaag tcgaatatag aacttgataa taccgtcgtt
     1141 acgatggttc ccacgcgtgg tgcagtggtt aaagcggagt ttgtgactca tgtgggttat
     1201 cgcgttctct tcagagtgtt aaatgcaaat ggtaaaccgg taccttttgg agccattgct
     1261 gcgatacaag atgcaagttt ggcagattca ggaattgtcg gtgaccgtgg cgaactttat
     1321 ctttctggtc taccagaaaa aggacaggtt acgttatcct ggggagaaaa cgcctcaaca
     1381 aaatgcatct tcaattattc actttcgaca ccagaaagtg agagcggatt aattgaacag
     1441 ggtgtgacat gtcattaaaa ggatttttat gaacaagtat atcaaacagt ggtgctttgc
     1501 tgtgtttatg ctctcgttaa gtagtgtagc acttgcagct cctaaaggta tctgtacccc
     1561 tgataatggc gtatttcaca gtacgcttga tttctcggga tatcttatta ccgcgaacga
     1621 aaataaggtt ggaacgacat ttaacaccac tgtaactaat ggatcctcat atcctggacg
     1681 ctgtcattgt gatactggta acgtaggaga attcccctat atctattata cgtcaaaaat
     1741 aaaccaggca ttaacttatg ctggggttca ctctaatatt aattattatg atcttaatcc
     1801 gaaccttgat gttgggattg ctatagatat tcttggggtt gggtatgtga atgcaccttt
     1861 tgaatatcat gctaacaacc cgtctggtaa tacaaagtac aattgcaacc gcattgaacc
     1921 tttaagtata tctagtgggg ctaaagcgat agtatatttt tatatcaaga agacatttgc
     1981 aggaaaattg attattcctg aaacaaagat agtgacattg tatggaacaa ttagccgtga
     2041 caccccggtg gattactcac agccgatggc taatgtttat attcggggcg atattacagc
     2101 tccgcaaagt tgcgaaataa ataatttaca gccagtttat tttgatttta aagaaatacc
     2161 agctgcagat ttttcatctg ttgttggaag tgcggtaata acacataaaa ttactaaaac
     2221 ggtcactatt gagtgtgaaa acctggggat actgaatacc gatgatatca gtacgtcttt
     2281 ttatgctacc gaacccaata cggacaattc aatggtcgta acttcaaact ctaacgtggg
     2341 gataaaaatt tacgacaaaa ataataagga aatcaaagtg aacggtggtg agttgccaac
     2401 agacatgggt aaatcaacag tgtatggtga aaaattaggt agtgtaactt tttcagctgc
     2461 tcctgcgagc cttactggag ctcgcccagc cccggggcaa tttactgcaa cagcgacgat
     2521 aactgttgag attgtgcgct aataggtctg acaacgattg ttcatcacat cgttgtcatc
     2581 tcacccattt ctttatcact tttaaatgca tcatgacaaa aagatgacat gtgggatttt
     2641 catcttcaca tttaaaatca gtaagttatt tggtaattcc tttctgtcat aaaaatgtca
     2701 tattccttac atataactgt cacctgtttg tcctattttg cttctcgtag ccaacaaaca
     2761 atgctttatg aatcctccca ggagacatta tgaaagttat gcgtaccacc gtcgcaactg
     2821 ttgtcgccgc gaccttatcg atgagcgctt tctctgtgtt tgcagaagca agcctgacag
     2881 gtgcaggtgc aaccttccct gcgccggtgt atgccaaatg ggctgacact taccagaaag
     2941 aaaccggtaa taaagttaac taccagggta tcggttcttc cggtggcgta aaacagatta
     3001 tcgctaatac cgttgatttt ggtgcctctg acgcgccgct gtctgacgaa aaactggctc
     3061 aggaaggtct gttccagttc ccgaccgtga ttggcggcgt ggtgctggcg gttaacattc
     3121 cagggctgaa gtctggcgaa ctggtgctgg atggtaaaac cctcggcgac atctacctgg
     3181 gcaaaatcaa gaagtgggat gatgaagcca tcgccaaact gaatccgggt ctgaaactgc
     3241 cttcacaaaa cattgctgta gtacgccgcg cagatggctc cgggacttcc ttcgtcttca
     3301 ccagctacct ggcgaaagtg aacgaagagt ggaaaaacaa cgttggtact ggctctaccg
     3361 taaaatggcc gatcggtctg ggcggtaaag gtaacgacgg tatcgccgcg ttcgttcagc
     3421 gtctgccggg tgcaattggt tatgttgaat atgattacgc gaagcagaac aacctggcgt
     3481 acaccaaact gatctccgct gatggtaaac cggttagtcc gaccgaagaa aacttcgcta
     3541 atgcagcaaa aggtgcagac tggagcaaaa ccttcgctca ggatctgacc aaccagaaag
     3601 gcgaagatgc atggcctatt acctctacca cgttcattct gatccacaaa gatcagaaga
     3661 aaccagaaca aggcacagaa gtgctaaaat tcttcgactg ggcgtacaaa accggggcta
     3721 aacaggcgaa cgacctggat tacgccagcc tgccggatag tgtagttgaa caggttcgcg
     3781 ctgcgtggaa gaccaatatt aaagacagta gcggtaagcc gctgtactaa taaaactcca
     3841 ggccgggtac ggtgttttac gccgcatccg gcattacaaa atgactttgt aaacgcgttt
     3901 aactgaagag taacttatgg ctgcaaccaa gcctgctttt aacccaccgg gtaaaaaggg
     3961 cgacataatt ttcagcgtgc tggtaaaact ggcggcgctg attgtgctat tgatgttggg
     4021 tggcattatt gtctctctga tcatctcctc ctggccgagc attcagaaat ttggtctggc
     4081 tttcctatgg accaaagagt gggatgcacc gaacgatatc tacggggcgc tggtgccgat
     4141 ctacggtacg ttggtgactt cgtttatcgc gctgctgatc gccgtcccgg tgagtttcgg
     4201 tatcgccctg ttcctgactg agcttgcgcc tggctggctg aaacgcccgc tgggtatcgc
     4261 cattgagctg ctggcagcca ttccaagtat cgtttacggc atgtggggcc tgtttatctt
     4321 tgcgccgctg ttcgccgttt actttcagga gccggtcggc aatatcatgt cgaatatccc
     4381 gattgttggc gcgctgttct ctggccccgc atttggtatc ggtatcctcg cggcaggcgt
     4441 gatcctcgcc atcatgatta ttccgtacat tgcggcggta atgcgtgatg tgttcgaaca
     4501 aaccccggtg atgatgaaag agtcggccta cggtattggc tgcaccacct gggaagttat
     4561 ctggcgtatc gttcttccgt tcaccaaaaa tggtgttatc ggcggcatca tgctggggct
     4621 gggccgcgcg ctcggtgaaa ccatggcggt gacctttatc atcggtaaca cctaccagct
     4681 cgacagcgcc tcgctgtaca tgccgggcaa tagtatcacc tctgcgttgg cgaacgaatt
     4741 tgcggaagcg gaatccggtc tgcacgttgc cgcactgatg gaactgggcc tgatcctgtt
     4801 tgtgattacc ttcatcgtcc tcgccgcatc gaagtttatg attatgcgcc tggctaagaa
     4861 tgagggggca cgctaatggc tatggttgaa atccaaacca ctgcggcgct ggctgaatct
     4921 cgccgcaaaa tgcaggcgcg tcgccgcctc aaaaaccgta ttgcgctgac gctctcgatg
     4981 gcgacgatgg ccttcggcct gttctggctg atctggattt taatgtccac catcactcgc
     5041 ggtatcgacg gtatgtcgct ggcgctgttc actgaaatga cgccgccgcc caatacggaa
     5101 ggtggtggtc tggcgaacgc cctggcgggt agcgggctgt taattttgtg ggccacggta
     5161 ttcggtacgc cgctgggcat tatggcgggg atttatctgg cggaatatgg tcgtaaatcc
     5221 tggctggcag aagtgattcg cttcattaac gacattctgc tctccgcgcc gtcgattgtg
     5281 gttggtctgt ttgtttacac catcgtggtg gcgcagatgg agcacttctc tggctgggcg
     5341 ggcgtgattg ccctggcgct gttgcaggtg ccgattgtta tccgcaccac cgagaacatg
     5401 ctgaaactgg tgccggacag cctgcgtgaa gcggcttatg cgctgggtac accgaagtgg
     5461 aagatgatct ctgcgattac gctgaaagcg tcggtgtccg ggatcatgac cggtatcctg
     5521 ctggcgattg cccgtattgc tggtgaaacc gcgccgctgc tgtttaccgc gctctccaac
     5581 cagttctgga gcacggacat gatgcagccg atcgccaacc tgccggtgac gatctttaag
     5641 tttgcgatga gcccgtttgc ggaatggcaa caactggcct gggccggggt attgattatt
     5701 accctgtgcg tactgctgct gaacattcta gcgcgcgttg tttttgcgaa gaataaacac
     5761 ggttaacact ttgccggatg cggcgtgaac gccttatccg gcctacggta agcctgatta
     5821 gcgaagtgca tcaggcacga tgaggaaaag attgcaatga gtatggttga aactgccccg
     5881 agtaaaattc aggttcgtaa tttgaacttc tactacggca aattccatgc cctgaaaaac
     5941 atcaacctgg atatcgctaa aaaccaggtt acggcgttta tcgggccgtc cggctgcggt
     6001 aaatcgacgc tgctgcgtac cttcaacaaa atgtttgaac tgtacccgga gcagcgtgcg
     6061 gaaggtgaaa ttctgcttga tggcgacaac atcctgacca actctcagga tatcgcactg
     6121 ctgcgtgcga aagtgggcat ggtgttccag aaaccgacgc cgtttccgat gtccatctac
     6181 gacaacatcg cttttggcgt tcgtctgttt gagaagctct cccgtgccga catggacgag
     6241 cgcgtgcagt gggcattgac caaagccgca ttgtggaacg aaaccaaaga taaattgcac
     6301 cagagcggtt actctctctc tggtggtcag caacagcgtc tgtgtattgc gcgtggtatc
     6361 gccattcgcc cggaagtgct gctgctcgac gaaccgtgtt cggcgctcga ccctatctct
     6421 accgggcgta ttgaagagct gatcaccgaa ctgaagcagg attacaccgt ggtgatcgtc
     6481 acccacaaca tgcagcaggc tgcgcgttgt tccgaccaca cggcgtttat gtacctgggc
     6541 gaattgattg agttcagcaa cacggacgat ctgttcacca agccagcgaa gaaacaaaca
     6601 gaagactaca tcaccggtcg ttacggttga ttcaggagtg cgttatggac agtctcaatc
     6661 ttaataaaca tatttccggc cagttcaacg ccgaactgga aagtatccgc acgcaggtga
     6721 tgaccatggg cggcatggtg gagcagcagc tttctgatgc aatcaccgcg atgcataacc
     6781 aggacagcga tctggcgaag cgcgtgatcg aaggcgacaa gaacgtcaac atgatggaag
     6841 tggcgatcga tgaagcctgc gtgcgcatta tcgccaaacg tcagccgacg gcgagcgacc
     6901 tgcgactggt tatggtgatc agtaaaacca ttgccgagct ggagcgtatt ggcgacgtgg
     6961 cggacaaaat ctgccgtact gcgctggaga aattctccca gcagcatcag ccgttgctgg
     7021 taagtctgga gtcgctgggc cgtcatacca tccagatgct gcacgacgtg ctggacgcgt
     7081 tcgcgcggat ggacattgac gaagcggtac gtatttatcg tgaagataaa aaagtcgatc
     7141 aggaatacga aggtattgtt cgtcaactga tgacctacat gatggaagat tcgcgtacca
     7201 ttccgagcgt acttactgcg ctgttctgcg cgcgttctat cgaacgtatt ggcgaccgct
     7261 gccagaatat ttgtgagttt atcttctact acgtgaaggg gcaggatttc cgtcatgtag
     7321 gcggtgatga gctggataaa ctgctggcgg gaaaagatag cgacaaataa ttcaccagac
     7381 aaatcccaat aacttaatta ttgggatt
//
LOCUS       DADMJE010000183         7195 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.186, whole genome shotgun sequence.
ACCESSION   DADMJE010000183 DADMJE010000000
VERSION     DADMJE010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7195
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.186"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(826..1356)
                     /locus_tag="JN001_003620"
                     /pseudo
     CDS             complement(826..1356)
                     /locus_tag="JN001_003620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416483.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b"
     gene            complement(1699..2349)
                     /gene="zinT"
                     /locus_tag="JN001_003621"
     CDS             complement(1699..2349)
                     /gene="zinT"
                     /locus_tag="JN001_003621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-binding protein ZinT"
                     /protein_id="HAY9054710.1"
                     /translation="MAIRLHKLAVALGVFIVSAPAFSHGHHSHGKPLTEVEQKAANGV
                     FDDANVQNRTLSDWDGVWQSVYPLLQSGKLDPVFQKKADADKTKTFAEIKDYYHKGYA
                     TDIEMIGIEDGIVEFHRNNETTSCKYDYDGYKILTYKSGKKGVRYLFECKDPESKAPK
                     YIQFSDHIIAPRKSSHFHIFMGNDSQQSLLNEMENWPTYYPYQLSSEEVVEEMMSH"
     gene            complement(2606..3241)
                     /gene="msrQ"
                     /locus_tag="JN001_003622"
     CDS             complement(2606..3241)
                     /gene="msrQ"
                     /locus_tag="JN001_003622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase
                     heme-binding subunit MsrQ"
                     /protein_id="HAY9054711.1"
                     /translation="MRLTAKQVTWLKVSLHLAGLLPFLWLVWAINHGGLGADPVKDIQ
                     HFTGRTALKFLLATLLITPLARYAKQPLLIRTRRLLGLWCFAWATLHLTSYALLELGV
                     NNLALLGKELITRPYLTLGIISWVILLALAFTSTQAMQRKLGKHWQQLHNFVYLVAIL
                     APIHYLWSVKIISPQPLIYAGLAVLLLALRYKKLRSLFNRLRKQVHNKLSV"
     gene            complement(3242..4246)
                     /gene="msrP"
                     /locus_tag="JN001_003623"
     CDS             complement(3242..4246)
                     /gene="msrP"
                     /locus_tag="JN001_003623"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-methionine-sulfoxide reductase catalytic
                     subunit MsrP"
                     /protein_id="HAY9054712.1"
                     /translation="MKKNQFLKESDVTAESVFFMKRRQVLKALGISAAALSLPHAAHA
                     DLLSWFKGNDRPPAPAGKPLEFSKPAAWQNNLPLTPVDKVSGYNNFYEFGLDKADPAA
                     NAGSLKTDPWTLKISGEVAKPLTLDHDDLTRRFPLEERIYRMRCVEAWSMVVPWIGFP
                     LHKLLALAEPTSNAKYVAFETIYAPEQMPGQQDRFIGGGLKYPYVEGLRLDEAMHPLT
                     LMTVGVYGKALPPQNGAPVRLIVPWKYGFKGIKSIVSIKLTRERPPTTWNLAAPDEYG
                     FYANVNPHVDHPRWSQATERFIGSGGILDVQRQPTLLFNGYADQVASLYRGLDLRENF
                     "
     gene            complement(4355..4711)
                     /gene="hiuH"
                     /locus_tag="JN001_003624"
     CDS             complement(4355..4711)
                     /gene="hiuH"
                     /locus_tag="JN001_003624"
                     /EC_number="3.5.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyisourate hydrolase"
                     /protein_id="HAY9054713.1"
                     /translation="MVYAAQQNILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTA
                     KTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFPEIPVEFHINKVNEHYH
                     VPLLLSQYGYSTYRGS"
     gene            4882..5553
                     /gene="hprR"
                     /locus_tag="JN001_003625"
     CDS             4882..5553
                     /gene="hprR"
                     /locus_tag="JN001_003625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707854.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor HprR"
                     /protein_id="HAY9054714.1"
                     /translation="MKILLIEDNQRTQEWVTQGLSEAGYVIDAVSDGRDGLYLALKDD
                     YALIILDIMLPGMDGWQILQTLRTAKQTPVICLTARDSVDDRVRGLDSGANDYLVKPF
                     SFSELLARVRAQLRQHHALNSTLEISGLRMDSVSQSVSRDNISITLTRKEFQLLWLLA
                     SRAGEIIPRTVIASEIWGINFDSDTNTVDVAIRRLRAKVDDPFPEKLIATIRGMGYSF
                     VAVKK"
     gene            5553..6911
                     /locus_tag="JN001_003626"
     CDS             5553..6911
                     /locus_tag="JN001_003626"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal sensor histidine kinase"
                     /protein_id="HAY9054715.1"
                     /translation="MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTT
                     LINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDGINKIVNRTNVSDDMLN
                     NIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKIN
                     SIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPL
                     GQALNKMHQALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIA
                     GNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICF
                     KVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNGYLNIDIASLGTK
                     IHEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSASYHYLNKHNVFRITLPQ
                     RN"
BASE COUNT         2021 a         1483 c         1627 g         2064 t
ORIGIN      
        1 gctgagaaaa aagcgtgctt tcccaatctg gggcaaatca cgtctgaatg acacctgaaa
       61 acaggtggtg gactcaagaa ggcttggaat attcttcttt aatgttatgt aattcattga
      121 tttttcgtgt acgattttaa gacatttttt ccaagaaaaa tttttaactc tttgattttt
      181 cgactctgta tcatcggtct cgaaaaccgg agtaggggca actctaccgg gggggcaaat
      241 ccccctctct ccgccacttt atcaatgact tatctcccga cttcccgcct tacttttcct
      301 aaacagaaca atcgtagaat attcttgaag ggttagatcg tcactgtttt ctgttcgata
      361 ctgtgacatt cagcacttga ttcgctatgg atctgacagg aagctttcga gcgaaaatgt
      421 gcagttattc agtcgttttc ttatcgctca ccattattct tttagacatt catcctatga
      481 aactgccgca aagttggtgg tgggaactga agttgcgtag agaaggggtc aataattgag
      541 tcaaaaaagg aacgcggccg tcagattaaa gccgcgggac aaagtccata atttccaaga
      601 gttgttgaat ttcccagctt ttttgaaagc ctttgtatta tactaacaag taaaaaaggt
      661 ttaaatacca aaattaacct gtatttttga taagtcttac cattgtacga tttacacagt
      721 ttctgctcct ccttgttgat agtggaaagg gtgcattgtg cacttgcgta aacatttatg
      781 acgcgttgat gtccatggtt cacatttcct tgtcagggga tcgacttatt tgcggcgagg
      841 catcattcgt aacagagtat tatctttctg aatgtagtga tgaaagagtg ctgcgccagc
      901 gtgagctgcg attaaaaagt aacctatatt tgcccaggtt tcgtgaatat tttatatcag
      961 tgctttaatt tcgctgtttg gggtaacaaa gggagacaca ttgaaaccaa ggaaactcca
     1021 cgattttcca ctgtaagcca tcaaagcaat ccccagcaga ggaagtgcaa ggaaggttat
     1081 ataaagcatg atgtgcatta gcgaagccgc tttcatttgc caggcaggtg gcggtggcac
     1141 aatagaagga tcactataac ggtgttttat aatcaggcgt gaaaacatta acacccaaac
     1201 gaatataccc gcattgtaat gtgtttctcg catcagcaga taagtactac tacctttagg
     1261 aaaccagcca cggagttcca tcgcggcata ggttattgca acgaaaagca gcgttatcca
     1321 atgtaaataa atttgagttt ttgagaatcg gttcattttt gtagctcctg taatttttac
     1381 agtcaagcta tcccacgaac cttaaaaatt ccttatacag atgtggtttt aagaatttgt
     1441 tatttaaaaa attgatagtg cacattgtaa ccagccaata taagcaatgg cgtgagcaca
     1501 ggtatctttc tctgttggcc gtattgtgta tggaatccgt tattggttaa ctcaatgcgg
     1561 gttagcttat taatatacag acacgtcata gtgatgagcg tgtctgtagc tagcttgcgt
     1621 tcagtggcgt ttgtggatgg accagtggca gttatgatga cttactaaag cggcatcgag
     1681 gcgttatcat gagaatactc aatgagacat catttcctcg accacttctt cgctactcaa
     1741 ctgatatgga taatacgttg gccagttttc catttcattt aataaagatt gctgtgaatc
     1801 attacccata aaaatgtgaa aatgagatga ttttcgtggt gcaattatat gatcgctaaa
     1861 ttgtatatat ttaggggctt tgctttcagg atctttacat tcgaataagt aacgaacgcc
     1921 tttcttgcct gatttatagg tgagtatttt gtatccatcg taatcatatt tacaggatgt
     1981 tgtttcatta tttctatgga attcaacaat gccgtcctca atgccaatca tctcgatatc
     2041 tgttgcataa cctttgtgat aataatcttt aatttcagca aatgttttag ttttatctgc
     2101 atccgctttc ttctgaaaga cggggtcaag tttgccactt tgcagtaaag gataaacgga
     2161 ttgccagacc ccatcccagt cactgagcgt tcggttttgt acattggcat catcaaaaac
     2221 accattagca gctttttgtt cgacctctgt taagggtttg ccgtgtgagt gatgaccatg
     2281 cgaaaaggca ggagcgctaa caataaagac acctaacgca acagccagtt tgtgaagacg
     2341 aatcgccaaa acagtttcct ccagagtcat tgtatatgat gtgtaatgtt atattgtaac
     2401 atatggcaaa atgcaacaac tcttaggaga tgagagcata gttttctcag gtgtacttat
     2461 ctatcttatt gaaataaaat gaattatatt gataatttga ggttgatgac aaacgaaaca
     2521 taatctgatg tgatctgcgt aggccggata gggcgctcgc gccgcatccg gcagggataa
     2581 cgcgtacttt gtcggcaata tgaagttata cagataattt gttgtgaacc tgcttgcgta
     2641 accggttaaa aagggaacgc aacttcttat accgtaaggc taaaagcagt acagccagcc
     2701 cagcgtagat gagcggctgc ggtgaaataa tcttcactga ccacagataa tgtattgggg
     2761 ccaggatcgc gacaagatag acgaaattat gcaactgttg ccagtgcttg ccgagttttc
     2821 gctgcatcgc ctgggttgaa gtaaacgcta aagcaagcaa aataacccag ctgataattc
     2881 ctaacgttaa ataaggccgg gtaattaact ccttgcctaa taacgccaga ttattcacgc
     2941 ccagctccag caatgcgtaa ctggttaaat gcagtgtcgc ccaggcaaag caccataagc
     3001 ctaacaggcg gcgagtgcgt atcaataacg gctgttttgc gtagcgtgcc agaggtgtga
     3061 ttaacaaggt cgccagcaaa aatttcagtg cagtgcgacc ggtaaaatgc tgaatatctt
     3121 tcaccggatc ggcacccagt ccaccgtgat tgatcgccca gaccagccag agaaacggca
     3181 acaatccggc aagatgcagg ctaactttca gccatgtcac ctgttttgct gtcagacgca
     3241 ttcagaaatt ctcccgcaaa tccaggccac gatacagcga tgccacctgg tcggcgtaac
     3301 cattaaacag tagcgttggc tggcgctgaa catcgaggat gccgcctgaa ccaataaatc
     3361 gttcggtagc ctgtgaccag cgcgggtgat caacatgcgg attaacgttg gcgtaaaaac
     3421 cgtattcgtc aggcgctgcc agattccagg tggttggcgg acgctcgcgg gtcagcttaa
     3481 tactgactat cgatttaatc cctttaaagc catatttcca cggcacaatc agtcgtaccg
     3541 gcgcgccatt ttgtggcggt aacgccttgc cataaacacc cacggtcatc agtgtgagcg
     3601 gatgcattgc ttcgtcgaga cgcaatcctt cgacataagg atatttcagc ccgccgccga
     3661 taaagcggtc ctgctggcct ggcatttgtt ccggtgcata aattgtttcg aaagcgacat
     3721 acttcgcatt gctggtgggt tcggcaagcg ccagcaattt gtgcagcgga aaaccaatcc
     3781 acggcaccac catcgaccat gcctccacgc agcgcatacg ataaatacgc tcttccagcg
     3841 ggaagcgacg ggttaaatca tcgtgatcga gggtcaatgg ttttgccact tcgccgctga
     3901 ttttcagtgt ccatggatcg gttttcaggc taccagcatt agcggcggga tcggctttat
     3961 ccagcccgaa ttcatagaag ttgttataac cggagacttt atctactggc gtcagtggca
     4021 ggttattttg ccaggcggca ggcttgctga actccagcgg ttttccggcg ggggcgggcg
     4081 ggcgatcgtt ccctttaaac cagctaagca gatcggcatg cgcagcgtga ggcaaagaaa
     4141 gtgcagctgc actgatgccc agtgctttta acacctgccg acgcttcata aagaataccg
     4201 actcggccgt aacatctgat tcttttaaaa attgattctt tttcataagc catcacactt
     4261 ttttgtcgtt agccagcaag agccgtttac tgttaatctg tcagggagtg tcctccctaa
     4321 cagtagcaga gatctgcttt tacatattta tgcattaact gccacgatag gttgaatacc
     4381 catattggct aagtaataaa ggcacatgat aatgctcgtt cactttatta atatgaaatt
     4441 caacggggat ctcagggaag aaactttcaa gattttgttt cttgaaatag tccccggttt
     4501 taaatacgac acggtaatcg cccgtagttg cagtttgctc gggccacagt gctttaattc
     4561 gtccatcctt atctgttttg gcggtattaa gttgtaacca gccgttatcc gccttctttt
     4621 caagagtgac tgtcacgtca gcagcgggtt ttccggtttg ctggttcaaa atgtgcacgc
     4681 taagaatgtt ttgttgtgcg gcataaacca aagaaggtaa tgaaaatgct gcaaataacg
     4741 ctttaacatg tttatatcct tgtcatgtga atgagttttg aggatagcga aaaagcggcc
     4801 agggtaacct tacagcagca ttacaatttt gtaatgaacc aggctgtttc tataacatat
     4861 gatttatggc atattatttt catgaagatt ttacttattg aagataatca aaggacccag
     4921 gagtgggtaa cgcaggggct ttccgaagcg ggttatgtca ttgatgccgt ttctgatggc
     4981 agagatgggc tttatcttgc gctgaaggat gattatgcat tgataattct ggatattatg
     5041 cttccgggta tggatggctg gcagatctta caaacgttaa gaacagcaaa gcaaacccct
     5101 gttatttgcc ttactgcaag ggattctgtc gatgacagag tcagagggct ggacagtgga
     5161 gcaaatgatt atctggtaaa acctttttca ttttctgagt tgctggcaag ggttcgggca
     5221 caattaaggc aacatcacgc tttgaattca acattagaaa tcagtggctt aagaatggac
     5281 tctgtaagtc aaagtgtgag cagggacaat atcagtatta cactgacgcg caaggagttt
     5341 cagttacttt ggctactggc ctccagagct ggcgaaatta tacccagaac ggttattgcg
     5401 agtgaaattt ggggaatcaa ctttgatagt gataccaata cggtggatgt cgccattcgc
     5461 aggctccgcg caaaagttga tgatcctttt cctgaaaagc taatcgccac aatccggggg
     5521 atgggctatt cattcgtagc ggtaaaaaaa taatgaaaag attgtctata accgtccgtt
     5581 taaccttgct ttttatattg ctgctgtctg ttgctggcgc tggaattgtc tggactctct
     5641 ataatggcct ggcaagtgag ttgaaatggc gcgatgatac aacactcatt aaccggacag
     5701 cacagatcaa gcagttgtta attgatgggg taaatccaga tacgttacct gtatacttta
     5761 accggatgat ggatgttagt caggatatct tgatcattca tggtgatggc atcaataaaa
     5821 ttgttaaccg gacaaatgtc agtgatgaca tgttaaataa catacctgct agtgagacaa
     5881 tcagcgcagc tggcatttac agaagcatta ttaatgatac tgagattgat gctttacgaa
     5941 ttaatattga tgaagtttcg ccatcattaa cggttactgt ggctaaattg gcttcagcta
     6001 gacataacat gcttgaacag tataaaatta atagcattat aatttgcatt gtcgccattg
     6061 tactttgctc agtattaagt ccgctgttaa tcagaacggg attacgagag atcaaaaagt
     6121 tgagtggtgt aacggaagcg ctgaattata acgatagccg agagcctgtt gaggttagcg
     6181 cattaccgag agaactaaaa cctcttgggc aggcgttgaa taaaatgcat caagccttag
     6241 tcaaagattt tgaacgccta agtcaatttg ctgacgatct cgctcatgaa cttagaacgc
     6301 ccattaatgc attactgggt cagaatcagg ttacgctcag tcaaaccaga agtatcgctg
     6361 aatatcaaaa aacaattgcc ggtaacattg aagagttgga aaatatttcg cggttaacag
     6421 agaacatact gtttcttgcc cgggcagata aaaacaatgt tttggtgaaa ctggactcgc
     6481 tttctctcaa taaggaagtc gaaaatttgt tggattatct tgaatatctt tcagacgaga
     6541 aagagatttg ctttaaggtc gagtgcaatc agcaaatctt tgcggataaa attttactgc
     6601 aacgaatgtt atcgaatctt attgttaatg ccattagata ttcaccagaa aaatcgcgta
     6661 ttcatataac cagttttctt gataccaacg gctatcttaa tattgatatc gccagtcttg
     6721 gaacgaaaat acatgagcct gaaaaactct tccgtagatt ttggcgggga gataattcgc
     6781 gtcattccgt aggtcaggga cttggtcttt ctttagtcaa agcgattgcc gaattgcatg
     6841 ggggaagtgc ttcatatcac tatctcaata agcataatgt gttccgaatt acgttaccgc
     6901 aaagaaatta acatagggct tcagtacgcc ataaattaac cgtgaaaaaa cgcagccacg
     6961 tcgtgagtac taacgcggct gcgattaatt atgcgcttac attcaaacgt aacagggatt
     7021 aacccgcgta agctgccagc atttcctgcg ccgccagttt acccaacgca ttcgctgcga
     7081 aaggactgtc gccggtgaga agtttacggt ccttatgtac tcgcccggtg atgtcgtcat
     7141 taatgatgtt catgcccatt ttcttcagct cttcgccgaa gtaccaggtg agatg
//
LOCUS       DADMJE010000184         7120 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.187, whole genome shotgun sequence.
ACCESSION   DADMJE010000184 DADMJE010000000
VERSION     DADMJE010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7120)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7120)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7120
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.187"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..648
                     /locus_tag="JN001_003627"
     CDS             <1..648
                     /locus_tag="JN001_003627"
                     /EC_number="4.1.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709490.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophanase"
                     /protein_id="HAY9054716.1"
                     /translation="TYKYADMLAMSAKKDAMVPMGGLLCMKDDSFFDVYTECRTLCVV
                     QEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIGVVCQQAGGH
                     AAFVDAGKLLPNIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAE
                     LLRLTIPRATYTQTHMDFIIEAFKHVKENAANIKGLTFTYEPKVLRHFTAKLKEV"
     gene            739..1986
                     /gene="tnaB"
                     /locus_tag="JN001_003628"
     CDS             739..1986
                     /gene="tnaB"
                     /locus_tag="JN001_003628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low affinity tryptophan permease TnaB"
                     /protein_id="HAY9054717.1"
                     /translation="MTDQAEKKHSAFWGVMVIAGTVIGGGMFALPVDLAGAWFFWGAF
                     ILIIAWFSMLHSGLLLLEANLNYPVGSSFNTITKDLIGNTWNIISGITVAFVLYILTY
                     AYISANGAIISETISMNLGYHANPRIVGICTAIFVASVLWISSLAASRITSLFLGLKI
                     ISFVIVFGSFFFQVDYSILRDATSTTAGTSYFPYIFMALPVCLASFGFHGNIPSLIIC
                     YGKRKDKLIKSVVFGSLLALVIYLFWLYCTMGNIPRESFKAIISSGGNVDSLVKSFLG
                     TKQHGIIEFCLLVFSNLAVASSFFGVTLGLFDYLADLFKIDNSHGGRFKTVLLTFLPP
                     ALLYLIFPNGFIYGIGGAGLCATIWAVIIPAVLAIKARKKFPNQMFTVWGGNLIPAIV
                     ILFGITVILCWFGNVFNVLPKFG"
     gene            2118..3293
                     /gene="mdtL"
                     /locus_tag="JN001_003629"
     CDS             2118..3293
                     /gene="mdtL"
                     /locus_tag="JN001_003629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtL"
                     /protein_id="HAY9054718.1"
                     /translation="MSRFLICSFALVLLYPAGIDMYLVGLPRIAADLNASEAQLHIAF
                     SVYLAGMAAAMLFAGKVADRSGRKPVAIPGAALFIIASVFCSLAETSTLFLAGRFLQG
                     LGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLF
                     WAMAMMGIAVLMLSLFILKETRPASPAASDKPRENSESLLNRFFLSRVVITTLSVSVI
                     LTFVNTSPVLLMEIMGFERGEYATIMALTAGVSMTVSFSTPFALGIFKPRTLMITSQV
                     LFLAAGITLAVSPSHAVSLFGITLICAGFSVGFGVAMSQALGPFSLRAGVASSTLGIA
                     QVCGSSLWIWLAAVVGIGAWNMLIGILIACSIVSLLLIMFVAPGRPVAAHEEIHHHA"
     gene            3268..4227
                     /gene="yidZ"
                     /locus_tag="JN001_003630"
     CDS             3268..4227
                     /gene="yidZ"
                     /locus_tag="JN001_003630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HTH-type transcriptional regulator YidZ"
                     /protein_id="HAY9054719.1"
                     /translation="MKKSITTLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLA
                     KLRAWFDDPLFVNSPLGLSPTPLMVSMEQNLAEWMQMSNLLLDKPHHQTPRGLKFELA
                     AESPLMMIMLNALSKRIYQRYPQATIKLRNWDYDSLDAITRGEVDIGFSGRESHPRSR
                     ELLSSLPLAIDYEVLFSDVPCVWLRKDHPALHETWNLDTFLRYPHISICWEQSDTWAL
                     DNVLQELGRERTIAMSLPEFEQSLFMAAQPDNLLLATAPRYCQYYNQLHQLPLVALPL
                     PFDESQQKKLEVPFTLLWHKRNSHNPKIVWLRETIKNLYASMA"
     gene            4384..5133
                     /locus_tag="JN001_003631"
     CDS             4384..5133
                     /locus_tag="JN001_003631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709485.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054720.1"
                     /translation="MATHFARGILTEGHLISVRLPSQCHQEARNIPPHRQSRFLASRG
                     LLAELMFMLYGIGELPEIVTLPKGKPVFSDKNLPSFSISYAGNMVGVALTTEGECGLD
                     MELQRATRGFHSPHAPDNHTFSSNESLWISKQNDPNEARAQLITLRRSVLKLTGDVLN
                     DDPRDLQLLPIAGRLKCAHVNHVEALCDAEDVLVWSVAVTPAIEKLSVWELDGKHSWK
                     SLPDIHSRANNPTSRMMRFAQLSTVKSFSPN"
     gene            5155..5721
                     /gene="yieF"
                     /locus_tag="JN001_003632"
     CDS             5155..5721
                     /gene="yieF"
                     /locus_tag="JN001_003632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent chromate oxidoreductase YieF"
                     /protein_id="HAY9054721.1"
                     /translation="MSEKLQVVTLLGSLRKGSFNGMVARTLPKIAPASMEVNALPSIA
                     DIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEYNYSVPGGLKNAIDWLSRLP
                     DQPLAGKPVLIQTSSMGVIGGARCQYHLRQILVFLDAMVMNKPEFMGGVIQNKVDRQT
                     GEVIDQGTLDHLTGQLTAFGEFIQRVKI"
     gene            complement(5775..7112)
                     /locus_tag="JN001_003633"
     CDS             complement(5775..7112)
                     /locus_tag="JN001_003633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY9054722.1"
                     /translation="MSQQHTTQASGQGMLERVFKLREHGTTARTEVIAGFTTFLTMVY
                     IVFVNPQILGVAGMDTSAVFVTTCLIAAFGSIMMGLFANLPVALAPAMGLNAFFAFVV
                     VQAMGLPWQIGMGAIFWGAVGLLLLTIFRVRYWMIANIPVSLRVGITSGIGLFIGMMG
                     LKNAGVIVANSETLVSIGNLTSHSVLLGILGFFIIAILASRNIHAAVLVSIVVTTLLG
                     WMLGDVHYNGIVSAPPSVMTVVGHVDLAGSFNLGLAGVIFSFMLVNLFDSSGTLIGVT
                     DKAGLADEKGKFPRMKQALYVDSISSVTGSFIGTSSVTAYIESSSGVSVGGRTGLTAV
                     VVGLLFLLVIFLSPLAGMVPGYAAAGALIYVGVLMTSSLARVNWQDLTESVPAFITAV
                     MMPFSFSITEGIALGFISYCVMKIGTGRLRDLSPCVIIVALLFILKIVFIDAH"
BASE COUNT         1692 a         1821 c         1803 g         1804 t
ORIGIN      
        1 acctacaaat atgccgatat gctggcgatg tccgccaaga aagatgcgat ggtgccgatg
       61 ggcggcttgc tgtgcatgaa agacgacagc ttctttgatg tgtacaccga gtgcagaacc
      121 ctttgcgtgg tgcaggaagg cttcccgaca tatggcggcc tggaaggcgg cgcgatggag
      181 cgtctggcgg taggtctgta tgacggcatg aatctcgact ggctggctta tcgtatcgcg
      241 caggtacagt atctggtcga tggtctggaa gagattggcg ttgtctgcca gcaggcgggc
      301 ggtcacgcgg cattcgttga tgccggtaaa ctgctgccga atatcccggc agaccagttc
      361 ccggcacagg cgctggcgtg cgagctgtat aaagtcgccg gtatccgtgc ggtagaaatt
      421 ggctctttcc tgttaggccg cgatccgaaa accggtaaac aactgccatg cccggctgaa
      481 ctgctgcgtt taaccattcc gcgcgcaaca tatactcaaa cacatatgga cttcattatt
      541 gaagccttta aacatgtgaa agagaacgcg gcgaatatta aaggattaac ctttacctac
      601 gaaccaaaag tattgcgtca cttcaccgca aaactgaaag aagtttaatt aatactacag
      661 agtggctata aggatgttag ccactctctt accctacatc ctcaataaca aaaatagcct
      721 tcctctaaag gtggcatcat gactgatcaa gctgaaaaaa agcactctgc attttggggt
      781 gttatggtta tagcaggtac agtaattggt ggaggtatgt ttgctttacc tgttgatctt
      841 gccggtgcct ggtttttctg gggtgccttt atccttatca ttgcctggtt ttcaatgctt
      901 cattccgggt tattgttatt agaagcaaat ttaaattatc ctgtcggctc cagttttaac
      961 accatcacca aagatttaat cggtaacacc tggaacatta tcagcggtat taccgttgcc
     1021 ttcgttctct atatcctcac ttatgcctat atctctgcta atggtgcgat cattagtgaa
     1081 acgatatcaa tgaatttggg ctatcacgct aatccacgta ttgtcgggat ctgcacagcc
     1141 attttcgttg ccagcgtatt gtggataagt tcgttagccg ccagtcgcat tacctcattg
     1201 ttcctcgggc tgaagattat ctcctttgtg atcgtgtttg gttctttctt cttccaggtc
     1261 gattactcca ttctgcgcga tgccaccagc accactgcgg gaacgtctta cttcccgtat
     1321 atctttatgg ctttgccggt gtgtctggcg tcatttggtt tccacggcaa tattcccagc
     1381 ctgattattt gctatggaaa acgcaaagat aagttaatca aaagcgtggt atttggttcg
     1441 ctgctggcgc tggtgattta tctcttctgg ctctattgca cgatggggaa tattccgcgc
     1501 gaaagcttta aggcgataat ctcctcaggc ggcaacgttg attcgctggt gaaatcgttc
     1561 ctcggcacca aacagcacgg cattatcgag ttttgcctgc tggtgttctc taacttagct
     1621 gttgccagtt cgttctttgg tgtcacgctg gggttgttcg attatctggc ggacctgttt
     1681 aagattgata actcccacgg cgggcgtttc aaaaccgtgc tgttaacctt cctgccacct
     1741 gcgttgttgt atctgatctt cccgaacggc tttatttacg ggatcggcgg tgccgggctg
     1801 tgcgccacca tctgggcggt cattattccc gcagtgcttg caatcaaagc tcgcaagaag
     1861 tttcccaatc agatgttcac ggtctggggc ggcaatctta ttccggcgat tgtcattctc
     1921 tttggtataa ccgtgatttt gtgctggttc ggcaacgtct ttaacgtgtt acctaaattt
     1981 ggctaaatcc ttcaagaagc cagccattcg ctggcttctt gcctctcagg aaatcactta
     2041 tgtccaaatg gcaactcgcc tgatcctcct tcaccacgta tgctttgcgt caccttacta
     2101 tcaggacgct ttagcccatg tcccgctttt tgatttgtag ttttgccctg gttttacttt
     2161 atcccgccgg gattgatatg tacctcgttg gtttaccgcg catcgccgcc gatctcaatg
     2221 ccagcgaagc gcagttgcat attgcgttct ccgtatatct ggcggggatg gcagctgcga
     2281 tgttatttgc cggtaaagtg gccgatcgtt cagggagaaa gccggtcgcc atacccggcg
     2341 cggcgctatt tattattgcc tcggtgttct gttcactggc tgaaaccagc acgttatttc
     2401 ttgcaggccg atttctacag gggttgggcg caggctgttg ttacgtagtg gcgttcgcca
     2461 ttttgcgcga cacgctggat gatcgacgtc gggctaaagt gctgtcatta ctcaacggta
     2521 ttacctgcat cattccggtg ttagcgccag tgctcggaca tctgattatg cttaaattcc
     2581 cgtggcagag tctgttctgg gcgatggcaa tgatgggcat cgcggtactg atgttgtctt
     2641 tgtttatttt aaaagaaacg cgcccagcgt cccccgctgc ttcggacaaa ccacgagaaa
     2701 atagcgagtc gctgcttaat cggtttttcc tcagccgtgt tgttatcacc accctcagcg
     2761 tttcggtgat cctcactttc gtcaatacat cgccggtatt gctgatggaa atcatgggtt
     2821 ttgagcgcgg agaatacgcc accattatgg cgttgaccgc tggcgtcagc atgaccgttt
     2881 cattctccac gccatttgcg ctgggaattt ttaagccacg tacgttgatg atcacctcgc
     2941 aggtgttatt ccttgcagcg gggatcaccc ttgccgtttc accttcccat gcggtttctc
     3001 tgtttggtat cacactgatt tgcgccggtt tctcggtagg ttttggcgta gcgatgagtc
     3061 aggcgttagg accattttca ttacgcgcgg gcgtagccag ctcgacctta ggtattgcgc
     3121 aggtttgcgg ttcgtcactg tggatttggc tggcagcggt ggttggtatc ggcgcatgga
     3181 atatgctgat cgggattctg attgcctgta gcatagtgag cctgttgctg attatgttcg
     3241 tcgcgcctgg acgccccgtt gccgctcatg aagaaatcca tcaccacgct tgatctcaat
     3301 ctgctgctct gtctgcaact gctgatgcag gagcgcagcg tgaccaaagc ggcgaagcgg
     3361 atgaacgtga ccccttcagc ggtgagtaag tcgctggcaa agttaagagc gtggtttgac
     3421 gacccgctct ttgtgaactc accgctgggg ctgtcgccca caccgctaat ggtcagcatg
     3481 gagcaaaatc tggcggaatg gatgcaaatg agcaatctgc tgctggataa accgcaccac
     3541 cagacaccgc gcggcctgaa gtttgagttg gcggcggaat cgccgctgat gatgatcatg
     3601 cttaatgcgc tgtcgaaacg gatctaccaa cgttacccgc aggcgaccat caaactacgt
     3661 aactgggatt acgattcctt agatgccatt actcgtggtg aagtggatat tggtttttcc
     3721 ggtcgcgaaa gccatcctcg ctcgcgggag ctgttaagct cgctaccgtt agccattgat
     3781 tatgaagtgc tgtttagtga tgtaccctgc gtctggttac gcaaagatca tccggcactg
     3841 catgaaacgt ggaatctgga caccttttta cgttatccgc atatcagcat ttgctgggaa
     3901 cagagcgaca cctgggcgct ggacaatgtg ttacaggagc tggggcgcga acgcacgatt
     3961 gctatgagcc tgccggaatt tgagcagtca ctgtttatgg cagcgcaacc cgacaatctg
     4021 ctactggcga ccgcgccgcg ctactgtcag tactacaatc aactccatca actgccgttg
     4081 gttgctcttc ctctcccgtt tgacgaaagc cagcaaaaaa agctggaagt tccttttacc
     4141 ctgctgtggc ataaacggaa cagtcataat ccgaagatcg tctggttacg ggaaaccatt
     4201 aaaaaccttt acgcgtcgat ggcataaccg aatcgtatga aacgcgaccc aatttcacaa
     4261 taaaatgtaa aaaagttgta ataagcttgt ctgaatcgaa cttttagccg ctttagtctg
     4321 tccatcattc cagtaaatga ttactcttat attcataatg gaccattaag catggagcga
     4381 aaaatggcga ctcactttgc ccgagggatt ttaacggaag gacatctgat ttctgttcgt
     4441 ctcccctccc agtgtcatca agaagcccga aacattcccc ctcatcgtca aagccgtttt
     4501 ctggcgtcca gaggtttact cgcagaactg atgttcatgc tgtatggcat tggcgaattg
     4561 ccggaaatcg tcaccctgcc gaaaggtaaa ccggttttca gtgataaaaa tttgccttcg
     4621 ttttctattt cctatgccgg gaatatggtt ggcgtggcgt taacaaccga aggtgaatgt
     4681 ggcctcgata tggaactaca gcgtgcgacg cgcgggtttc atagcccaca cgcgcccgat
     4741 aaccacacct tttccagcaa tgaatcgcta tggatcagta aacaaaacga tcctaacgaa
     4801 gcgcgggcgc agctcatcac gctgcgccga agcgtgctaa aactaaccgg tgatgttttg
     4861 aatgacgatc cgcgcgatct gcagctgctg cccattgccg gacgcctgaa atgtgctcat
     4921 gtaaatcatg tagaagcgtt atgcgacgcg gaggacgtgc tggtgtggtc cgtggcggtc
     4981 acgcccgcga ttgaaaagct cagtgtctgg gagttagatg gcaaacacag ctggaaaagc
     5041 ctgccggata ttcacagccg cgccaacaat cctaccagcc ggatgatgcg ttttgcccag
     5101 ctctctaccg tgaagtcttt ttcgccaaat tgatagacaa ccacaggagt cattatgtct
     5161 gaaaaattgc aggtggttac gttactgggg agcctgcgca aaggctcatt taatggcatg
     5221 gttgcacgta ccctgccgaa aattgctccg gcgagcatgg aagtcaatgc gttaccttcc
     5281 attgccgaca ttcccctgta tgacgctgac gtacagcagg aagaaggttt tccagcaacg
     5341 gttgaagctc tggcggaaca gatccgtcag gctgacggtg tggtgatcgt cacgccggaa
     5401 tataactact cggtaccggg tgggctgaaa aatgccatcg actggctttc ccgcctgccg
     5461 gatcaaccgc tggccggtaa accggtgttg attcagacca gctcaatggg cgtgattggc
     5521 ggcgcgcgct gtcagtatca cctgcgccag attctggttt tcctcgatgc aatggtgatg
     5581 aacaagccgg aatttatggg cggcgtgatt cagaacaaag ttgatcggca aaccggagaa
     5641 gtgattgatc agggtacgct ggaccacctg accgggcaat tgaccgcatt tggtgagttt
     5701 attcagcgag ttaagatcta aataaaaaac ccgccagtaa tcatgcatgg cgggttttta
     5761 atgcgctatc gattttaatg agcgtcgata aatacaatct tcaggataaa cagcagcgca
     5821 acgatgatta cgcacgggct aaggtcacgc agacgcccgg taccaatctt catcacgcag
     5881 taggagataa agcccagcgc aataccttcg gtaatcgaaa agctgaacgg catcatcacg
     5941 gcggtaataa acgccggaac agattcagta agatcctgcc agttcacgcg agcaagactt
     6001 gaggtcatca acacgccaac gtagatcaac gcgccagctg cagcgtagcc tggcaccatt
     6061 cccgccagcg gcgacagaaa gataaccagc aggaacagca gaccaacaac cactgccgtc
     6121 agaccggtac gaccgccaac cgatacgccg gaagaggact caatataagc cgtaacggaa
     6181 gaagtaccga taaacgaacc ggtcacggaa gagatactgt cgacatacag cgcttgcttc
     6241 atgcgcggga atttcccctt ctcatccgcc agacctgctt tatcggtcac gccaatcagc
     6301 gtaccggagg agtcaaacaa gttgaccaac atgaaagaga aaatcacccc tgccagcccg
     6361 aggttaaacg acccggctaa atctacatga cccacaactg tcattacgct cggcggcgca
     6421 gaaacgatgc cattgtagtg cacatcaccc agcatccagc ccagcagcgt cgtcaccacg
     6481 atagaaacca gcaccgctgc gtgaatgttg cgcgaggcca gaatagcaat gatgaagaag
     6541 ccgaggatac ccagaagtac gctgtgagaa gtcagattac cgatgctcac cagcgtttcc
     6601 gagttagcga caatcacacc tgcgtttttc agccccatca tgccgataaa caggccgata
     6661 ccgctggtaa tacccacacg cagacttacc ggaatgttag caatcatcca gtaacgaacg
     6721 cggaaaatgg tcaaaagaag cagtccgaca gcgccccaga agattgcgcc cataccgatc
     6781 tgccacggca gccccattgc ctggacaacc acaaaagcga aaaaggcgtt aagccccatc
     6841 gcaggagcca gcgccaccgg aaggtttgca aacaatccca tcataatgct accgaaagca
     6901 gcaatcagac aggttgttac gaagacggca ctggtgtcca tgccagcaac gcccagaatt
     6961 tgtgggttaa caaaaacgat gtaaaccatc gtcaggaagg tggtaaaacc ggcgatcact
     7021 tcggtccgtg ccgtcgtgcc atgttcgcgc agtttaaaca cgcgttccag catcccctgg
     7081 ccagaagcct gggttgtgtg ttgttgactc attatctatt
//
LOCUS       DADMJE010000185         7056 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.188, whole genome shotgun sequence.
ACCESSION   DADMJE010000185 DADMJE010000000
VERSION     DADMJE010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7056)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7056)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7056
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.188"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            40..246
                     /locus_tag="JN001_003634"
                     /pseudo
     CDS             40..246
                     /locus_tag="JN001_003634"
                     /inference="COORDINATES: protein motif:HMM:TIGR02601.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            991..2904
                     /locus_tag="JN001_003635"
                     /pseudo
     CDS             991..2904
                     /locus_tag="JN001_003635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001306477.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
     gene            complement(3032..3754)
                     /locus_tag="JN001_003636"
     CDS             complement(3032..3754)
                     /locus_tag="JN001_003636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-demethylubiquinone
                     3-O-methyltransferase/2-octaprenyl-6-hydroxy phenol
                     methylase"
                     /protein_id="HAY9054723.1"
                     /translation="MNAEKSPENHNVDHEEIAKFEAVASRWWDLEGEFKPLHRINPLR
                     LGYIAERAGGLFGKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESG
                     IQVDYVQETVEEHAAKHAGQYDVVTCMEMLEHVPDPQSVVRACAQLVKPGGDVFFSTL
                     NRNGKSWLMAVVGAEYILRMVPKGTHDVKKFIKPAELLGWVDQTSLKERHITGLHYNP
                     LTNTFKLGPGVDVNYMLHTQNK"
     gene            3901..6528
                     /gene="gyrA"
                     /locus_tag="JN001_003637"
     CDS             3901..6528
                     /gene="gyrA"
                     /locus_tag="JN001_003637"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit A"
                     /protein_id="HAY9054724.1"
                     /translation="MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPV
                     HRRVLYAMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYYTIVRMAQPFSLRYML
                     VDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYDGTEKIPDVMP
                     TKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDDEDISIEGLMEHIPGPDFP
                     TAAIINGRRGIEEAYRTGRGKVYIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEK
                     IAELVKEKRVEGISALRDESDKDGMRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINM
                     VALHHGQPKIMNLKDIIAAFVRHRREVVTRRTIFELRKARDRAHILEALAVALANIDP
                     IIELIRHAPTPAEAKTALVANPWQLGNVAAMLERAGDDAARPEWLEPEFGVRDGLYYL
                     TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLDQIAELLRILGSADRLMEVIREELEL
                     VREQFGDKRRTEITANSADINLEDLITQEDVVVTLSHQGYVKYQPLSEYEAQRRGGKG
                     KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRPIVNLLP
                     LEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDEL
                     IGVDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRG
                     DGAILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVGAVQVDDCDQIMMI
                     TDAGTLVRTRVSEISIVGRNTQGVILIRTAEDENVVGLQRVAEPVDEEDLDTIDGSAA
                     EGDDEIAPEVDVDDEPEEE"
     gene            6677..>7056
                     /locus_tag="JN001_003638"
     CDS             6677..>7056
                     /locus_tag="JN001_003638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416733.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2138 family protein"
                     /protein_id="HAY9054725.1"
                     /translation="MSGEKKAKGWRFYGLVGFGAIVLLSAGVWALQYAGSGPEKTLSP
                     LVMHNNLQIDLNEPDLFLDSDSLSQLPKDLLTIPFLHDVLSEDFVFYYQNHADRLGIE
                     GSIRRIVYEHDLTLKDKLFSSLLD"
BASE COUNT         1693 a         1743 c         2012 g         1608 t
ORIGIN      
        1 ggctatggag atggtccttc cactgcggcg ggtggcttta tgtatctcgg cttaagtgaa
       61 gttacctttg atattgccga cggaaaaacg ctggttatcg gcaatacaga gaatgacgga
      121 gctgttgact ctattgctgg taccgggttg atcaccaaaa caggttccgg cgatctggta
      181 cttaatgcag ataacaatga ctttactggc gagatgcaga ttgaaaacgg tgaagttacc
      241 ctgggccgca gcaactccct gatgaatgtc ggcgatacgc attgccagga cgatccgcaa
      301 gactgctacg gtctgacgat agggagtatt gataagtacc agaatcaggc agagctaaac
      361 gttggctcca cccaacaaac ctttgtgcac tcattgacgg gctttcagaa tggcacttta
      421 aatatcgatg ctggtggcaa tgttactgtt aatcaaggta gttttgctgg caccatcgaa
      481 ggtgctggtc agctcaccat tgcgcaaaac ggcagctacg tgctgtcggg ggcgcagtcg
      541 atggcgctaa ccggcgatat agtcgttgat gatggtgcgg tgctttcgct ggaaggcgac
      601 gcggcagatc tcgccgctct ccaggacgat ccgcagtcga tcgtgttaaa cggcggtgtg
      661 ctcgatctct ctgatttctc cacctggcag agcggcacat catacaatga tggccttgaa
      721 gtcagtggca gcagcggaac ggttatcggc agtcaggatg tggtagatct tgcaggtggc
      781 gacaatttgc atatccgcgg cgacgggaaa gatggcgtct acgtggtggt cgatgcgagc
      841 gacgggcagg taagtctggc aaacaataat agttatttgg gcacaacaca aatcgcctcc
      901 ggtacgctga tggtgagcga caactcgcag cttggagata cccactataa ccgccaggtt
      961 atctttaccg ataagcaaca agaaagcgtg atggagatta ctgccaatgt cgatactcgc
     1021 tctacgacga ctgagcatgg gcgtgatatt gaaatgcgcg ccgacggtga agtggcagtt
     1081 gatgcggggg tagacacgca gtggggcgca ctgatggctg acagcagcgg gcagcatcag
     1141 gatgagggta gcacatttac taaaacgggg gcgggtacgc tggagctgac cgccagcggt
     1201 acaacgcagt cggcagtacg tgtcgaagaa ggcaccctga aaggcgatgt tgcggatatc
     1261 tttccttatg cttcgtcact gtgggtcggt gatggggcga cgttcgttac tggcgcggat
     1321 caggatattc agtctatcga tgctacttcc agcggcacta tcgatatcag cgatggtacg
     1381 gttttgcgtc tgaccgggca ggatacttcc gtcgccctta atgcctcatt gtttaacggc
     1441 gatgggacgc tggtgaatgc taccgatggc gtgacgttga caggtgagct taataccaac
     1501 cttgaaactg acagcctgac ctatcttgcc gacgtgacgg ttaatggtga tctgaccaat
     1561 acgtccggtg cggttagcct gcaaaatggc gtcgctggcg atacgctaac ggtaaacggt
     1621 gattatactg gcggcggtac gctactgttc gacagcgaat taaacggcga tgactcggta
     1681 agcgatcaat tggtgatgaa cggtaatact gctggcaaca caactgtggt ggttaactcc
     1741 attacaggga ttggtgagcc gacatcgaca ggcattaaag tggttgattt cgcagctgat
     1801 cccacgcagt ttcaaaacaa tgcacagttc agtctggctg gcagtggcta cgtcaacatg
     1861 ggagcgtatg actacacgct agtggaagat aacaacgact ggtatctgcg atcgcaagaa
     1921 gtaacgccgc catcgccacc tgatccagac ccggacccaa cacccgatcc tgacccaaca
     1981 cccgatccaa tccccgctta ccagccggtg ctgaatgcca aagttggcgg ttatctcaat
     2041 aacctgcggg cggcaaatca ggcgtttatg atggagcgac gcgatcacgc tggtggcgat
     2101 ggtcagacgc tgaatttacg tgttatcggc ggacgttatc attacacggc ggcagggcaa
     2161 ctggctcagc aggaagacac ttctacggtg cagcttagcg gcggcttgtt tagcgggcgc
     2221 tggggcacgg atggcgagtg gatgcttggg gcggttggtg gctacagtga taatcagggc
     2281 gacagccgct cgaatatgac cggaactcgc gccgataacc agaaccacgg ttatgccgtt
     2341 gggctgacct caagctggta tcagcacggt aattagaagc agggggcctg gctggatagc
     2401 tggctgcaat acgcgtggtt taacaatgat gtttccgaac atgaagatgg cgtggatcgt
     2461 taccattcgt cggggattat cgcctcgctg gaagccgggt atcagtggtt accggggcgt
     2521 ggtgtggtga ttgaaccgca ggcgcaggtg atttatcagg acgtgcagca ggatgatttt
     2581 accgccgcta accatgcgcg cgtgtcacaa tcgcaggggg atgatattca gacgcggctg
     2641 ggtttacaca gcgaatggcg taccgcggtt ggtgtcacac caacattaga tctgaattat
     2701 tatcacgatc cccatgcgac ggaaattgaa gaagatggca gcactatcag tgacgatgcg
     2761 gtgaagcgac ggggtgaaat aaaagtggga gtcacgggca atatcagtca gcgagtgtcc
     2821 ctgcgcggca gcgtggcgtg gcagaaaggg agtgatgatt ttgcccagac ggcagggttt
     2881 ttgtcgatga cggtgaaatg gtaatcactg tctagtcggc acggttgccg gatgcggcgt
     2941 aaacgcctta tccggcctac ggggagcatt tgtaggcctg ataagacgcg gcaagcgtcg
     3001 catcaggcat tggctcggcc aaacaacaac ctcacttatt ctgcgtgtgc agcatatagt
     3061 tcacatccac gccggggccg agtttaaaag tattagtgag cgggttgtaa tgtagcccag
     3121 ttatatgtcg ctctttaagg cttgtctgat ctacccagcc aagcagttct gccggtttaa
     3181 taaacttctt cacatcatgc gtgcctttgg gcaccatgcg caaaatatat tccgcgccaa
     3241 ccaccgccat cagccatgac ttgccgttgc ggttaagcgt cgagaaaaag acatcgccgc
     3301 ctggtttcac cagttgcgca caggctctga ccactgactg cggatcgggg acgtgctcca
     3361 gcatctccat gcaggtcacc acatcatact gcccggcatg ttttgccgcg tgctcttcca
     3421 cggtttcctg cacataatcc acctgaatgc cgctttccag cgcgtgcagt tttgccacct
     3481 gcaatggctc aaagcccata tccagaccgg tcaccgtcgc gccttcgcgc gccatactct
     3541 cggccagaat gccgccgcca caaccgacat cgagcacctt tttgccaaat aaaccgccag
     3601 cacgctcggc aatatagccc agacgcagcg ggttaatgcg gtgcaacggt ttgaactcac
     3661 cttcaagatc ccaccagcgg gaggcgacgg cttcaaattt agcgatctct tcgtggtcta
     3721 cgttatggtt ttccggcgat ttttcggcat tcattggcac ttctactccg taattggcaa
     3781 gacaaacgag tatatcaggc attggatgtg aataaagcgt ataggtttac ctcaaactgc
     3841 gcggctgtgt tataatttgc gacctttgaa tccgggatac agtagaggga tagcggttag
     3901 atgagcgacc ttgcgagaga aattacaccg gtcaacattg aggaagagct gaagagctcc
     3961 tatctggatt atgcgatgtc ggtcattgtt ggccgtgcgc tgccagatgt ccgagatggc
     4021 ctgaagccgg tacaccgtcg cgtactttac gccatgaacg tactaggcaa tgactggaac
     4081 aaagcctata aaaaatctgc ccgtgtcgtt ggtgacgtaa tcggtaaata ccatccccat
     4141 ggtgactcgg cggtttatta cacgatcgtc cgtatggcgc agccattctc gctgcgttac
     4201 atgctggtag acggtcaggg taacttcggt tccatcgacg gcgactctgc ggcggcaatg
     4261 cgttatacgg aaatccgtct ggcgaaaatt gcccatgaac tgatggccga tctcgaaaaa
     4321 gagacggtcg atttcgttga taactatgac ggcacggaaa aaattcccga cgtcatgcca
     4381 accaaaattc ctaacctgct ggtgaacggt tcttccggta tcgccgtagg tatggcaacc
     4441 aacatcccgc cgcacaacct gacggaagtc atcaacggtt gtctggcgta tatcgatgat
     4501 gaagacatca gcattgaagg gctgatggaa cacatcccgg ggccggactt cccgacggcg
     4561 gcaatcatta acggtcgtcg cggtattgaa gaagcttacc gtaccggtcg cggcaaggtg
     4621 tatatccgcg ctcgcgcaga agtggaagtt gacgccaaaa ccggtcgtga aaccattatc
     4681 gtccacgaaa ttccgtatca ggtaaacaaa gcgcgcctga tcgagaagat tgcggaactg
     4741 gtaaaagaaa aacgcgtgga aggcatcagc gcgctgcgtg acgagtctga caaagacggt
     4801 atgcgcatcg tgattgaagt gaaacgcgat gcggtcggtg aagttgtgct caacaacctc
     4861 tactcccaga cccagttgca ggtttctttc ggtatcaaca tggtggcatt gcaccatggt
     4921 cagccgaaga tcatgaacct gaaagacatc atcgcggcgt ttgttcgtca ccgccgtgaa
     4981 gtggtgaccc gtcgtactat tttcgaactg cgtaaagctc gcgatcgtgc tcatatcctt
     5041 gaagcattag ccgtggcgct ggcgaacatc gacccgatca tcgaactgat ccgtcatgcg
     5101 ccgacgcctg cagaagcgaa aactgcgctg gttgctaatc cgtggcagct gggcaacgtt
     5161 gccgcgatgc tcgaacgtgc tggcgacgat gctgcgcgtc cggaatggct ggagccagag
     5221 ttcggcgtgc gtgatggtct gtactacctg accgaacagc aagctcaggc gattctggat
     5281 ctgcgtttgc agaaactgac cggccttgag cacgaaaaac tgctcgacga atacaaagag
     5341 ctgctggatc agatcgcgga actgttgcgt attcttggta gcgccgatcg tttgatggaa
     5401 gtgatccgtg aagagctgga gctggttcgt gaacagttcg gtgacaaacg tcgtactgaa
     5461 atcaccgcca acagcgcaga catcaacctg gaagatctga tcactcagga agatgtggta
     5521 gtgacgctct ctcaccaggg ctacgttaag tatcagccgc tttctgaata cgaagcgcag
     5581 cgtcgtggcg ggaaaggtaa atctgccgca cgtattaaag aagaagactt tatcgaccga
     5641 ctgctggtgg cgaacactca cgaccatatt ctgtgcttct ccagccgtgg tcgcgtctat
     5701 tcgatgaaag tttatcagtt gccggaagcc actcgtggcg cgcgcggtcg tccgatcgtc
     5761 aacctgctgc cgctggagca ggacgaacgt atcactgcga tcctgccagt gaccgagttt
     5821 gaagaaggcg tgaaagtctt catggcgacc gctaacggta ccgtgaagaa aactgtcctc
     5881 accgagttca accgtctgcg taccgccggt aaagtggcga tcaaactggt tgacggcgat
     5941 gagctgatcg gcgttgacct gaccagcggc gaagacgaag taatgctgtt ctccgctgaa
     6001 ggtaaagtgg tgcgctttaa agagtcttct gtccgtgcga tgggctgcaa caccaccggt
     6061 gttcgcggta ttcgcttagg tgaaggcgat aaagtcgtct ctctgatcgt gcctcgtggc
     6121 gatggcgcaa tcctcaccgc aacacaaaac ggttacggta aacgtaccgc agtggcggaa
     6181 tacccaacca agtcgcgtgc gacgaaaggg gttatctcca tcaaggttac cgaacgtaac
     6241 ggtttagttg ttggcgcggt acaggtagat gactgcgacc agatcatgat gatcaccgat
     6301 gccggtacgc tggtacgtac tcgcgtttca gaaatcagca tcgtgggccg taacacccag
     6361 ggcgtgatcc tcatccgtac tgcggaagat gaaaacgtag tgggtctgca acgtgttgct
     6421 gaaccggttg acgaggaaga tctcgatacc atcgacggca gtgccgcgga aggggacgat
     6481 gaaatcgctc cggaagtgga cgttgacgac gagccagaag aagaataatt ttacttcttc
     6541 atgccaaaag ggagctatct cccttgtttg aattgaaaag tccaggctgc aaagtctggg
     6601 cttttgtcgt attagggcac ggtaaagttt ggctgtgccc gtaaaaaatg gctggctata
     6661 cacaaggaat gtggcaatga gtggtgaaaa aaaggcgaaa ggctggcggt tctatggtct
     6721 tgtaggtttt ggcgcaatag tactgctttc cgctggcgtc tgggcgttgc aatatgctgg
     6781 cagtgggcca gaaaaaacgt tgtcgccgct ggtgatgcac aacaatctgc aaatcgatct
     6841 caatgagccg gacctctttc tcgacagcga ctctctgagc cagcttccca aagatctcct
     6901 caccattccg tttctccacg atgttctgag tgaagatttc gttttctatt atcagaatca
     6961 tgccgatcgt ctgggcattg aaggcagcat tcgtcgcatt gtctatgaac acgatctcac
     7021 gctgaaagat aaactctttt cgtcactctt agatca
//
LOCUS       DADMJE010000186         7015 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.189, whole genome shotgun sequence.
ACCESSION   DADMJE010000186 DADMJE010000000
VERSION     DADMJE010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7015)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7015)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7015
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.189"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..311)
                     /locus_tag="JN001_003639"
     CDS             complement(<1..311)
                     /locus_tag="JN001_003639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416652.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent dihydropyrimidine dehydrogenase
                     subunit PreA"
                     /protein_id="HAY9054726.1"
                     /translation="MLTKDLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGV
                     VFKTIGFFIANEVSPRFDHLVKEDTGFIGFKNMEQIAEHPLEENLAALRRLKEDYPDK
                     V"
     gene            complement(305..1543)
                     /locus_tag="JN001_003640"
     CDS             complement(305..1543)
                     /locus_tag="JN001_003640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HAY9054727.1"
                     /translation="MPQQNYLDELTPAFTPLLAIKEASRCLLCHDAPCSQACPAQTDP
                     GKFIRSIYFRNFKGAAETIRENNALGAVCARVCPTEKLCQSGCTRAGVDAPIDIGRLQ
                     RFVTDFEQQTGMEIYQPGTKTLGKVAIIGAGPAGLQASVTLTNQGYDVTIYEKEAQPG
                     GWLRNGIPQFRLPQSVLDAEIARIEKMGVTIKCNNEVGNTLTLEQLKAENRAVLVTVG
                     LSSGSGLPLFEHSDVEIAVDFLQRARQAQGDISIPQSALIIGGGDVTMDVASTLKVLG
                     CQAVTCVAREELDEFPASEKEFTSARELGVSIIDGFTPVAVEGNKVTFKHVRLSGELT
                     MAADKIILAVGQHARLDAFAELEPQRNTIKTQNYQTRDPQVFAAGDIVEGDKTMVYAV
                     KTGKEAAEAIHHYLEGACSC"
     gene            complement(1940..2179)
                     /locus_tag="JN001_003641"
     CDS             complement(1940..2179)
                     /locus_tag="JN001_003641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2542 family protein"
                     /protein_id="HAY9054728.1"
                     /translation="MDVQQFFVVAVFFLIPIFCFREAWKGWRAGAIDKRVKNAPEPVY
                     VWRAKNPGLFFAYMVAYIGFGILSIGMIVYLIFYR"
     gene            complement(2182..2901)
                     /gene="sanA"
                     /locus_tag="JN001_003642"
     CDS             complement(2182..2901)
                     /gene="sanA"
                     /locus_tag="JN001_003642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane permeability protein SanA"
                     /protein_id="HAY9054729.1"
                     /translation="MLKRVFLSLLVLIGLLLLTVLGLDRWMSWKTAPYIYDELQDLPY
                     RQVGVVLGTAKYYRTGVINQYYRYRIQGAINAYNSGKVNYLLLSGDNALQSYNEPMTM
                     RKDLIAAGVDPSDIVLDYAGFRTLDSIVRTRKVFDTNDFIIITQRFHCERALFIALHM
                     GIQAQCYAVPSPKDMLSVRIREFAARFGALADLYIFKREPRFLGPLVPIPAMHQVPED
                     AQGYPAVTPEQLLELQKKQGK"
     gene            complement(3051..3935)
                     /gene="cdd"
                     /locus_tag="JN001_003643"
     CDS             complement(3051..3935)
                     /gene="cdd"
                     /locus_tag="JN001_003643"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HAY9054730.1"
                     /translation="MHPRFQTAFAQLADNLQSALEPILADKYFPALLTGEQVSSLKSA
                     TGLDEDALAFALLPLAAACARTPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVH
                     AEQSAISHAWLSGEKALAAITVNYTPCGHCRQFMNELNSGLDLRIHLPGREAHALRDY
                     LPDAFGPKDLEIKTLLMDEQDHGYALTGDALSQAAIAAANRSHMPYSKSPSGVALECK
                     DGRIFSGSYAENAAFNPTLPPLQGALILLNLKGYDYPDIQRAVLAEKADAPLIQWDAT
                     SATLKALGCHSIDRVLLA"
     gene            complement(4065..4760)
                     /locus_tag="JN001_003644"
     CDS             complement(4065..4760)
                     /locus_tag="JN001_003644"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidB/LrgB family autolysis modulator"
                     /protein_id="HAY9054731.1"
                     /translation="MMANIWWSLPLTLIVFFAARKLAARYKFPLLNPLLVAMVVIIPF
                     LMLTGISYDSYFKGSEVLNDLLQPAVVALAYPLYEQLHQIRARWKSIITICFIGSVVA
                     MVTGTSVALLMGASPEIAASILPKSVTTPIAMAVGGSIGGIPAISAVCVIFVGILGAV
                     FGHTLLNAMHIRTKAARGLAMGTASHALGTARCAELDYQEGAFSSLALVLCGIITSLI
                     APFLFPIILAVMG"
     gene            complement(4757..5155)
                     /locus_tag="JN001_003645"
     CDS             complement(4757..5155)
                     /locus_tag="JN001_003645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CidA/LrgA family protein"
                     /protein_id="HAY9054732.1"
                     /translation="MSKTLNIIWQYLRAFVLIYACLYAGIFIASLLPVTIPGSIIGML
                     ILFVLLALQILPAKWVNPGCYVLIRYMALLFVPIGVGVMQYFDLLRAQFGPVVVSCAV
                     STLVVFLVVSWSSQLVHGERKVVGQKGSEE"
     gene            5394..6344
                     /gene="dusC"
                     /locus_tag="JN001_003646"
                     /pseudo
     CDS             5394..6344
                     /gene="dusC"
                     /locus_tag="JN001_003646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001311941.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine(16) synthase DusC"
     gene            complement(6732..6815)
                     /gene="yohP"
                     /locus_tag="JN001_003647"
     CDS             complement(6732..6815)
                     /gene="yohP"
                     /locus_tag="JN001_003647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020233574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YohP"
                     /protein_id="HAY9054733.1"
                     /translation="MKIILWAVLIIFLIGLLVVTGVFKMIF"
BASE COUNT         1827 a         1795 c         1732 g         1661 t
ORIGIN      
        1 aatactttgt ccgggtaatc ttctttcagc cgacgcaggg cggccagatt ctcctccagc
       61 ggatgctcgg caatctgctc catatttttg aagccgataa aaccggtatc ttctttcacc
      121 agatgatcaa aacgcggcga gacttcgttg gcgataaaaa agccgatcgt tttaaacacc
      181 acaccgcccc aacctgtgtc gtaggctttg gcacacatct catagcagtt gcctaccggc
      241 gaagaagaga ggcagaacgg gttgggaaac ttcacgccgc aaaaagtaat cgaaagatct
      301 ttcgttaaca tgagcaagct ccctctaaat agtgatgaat cgcctcggcg gcttctttcc
      361 cggttttcac ggcatagacc atggttttgt caccctcaac aatatcgcca gcagcaaaga
      421 cttgcgggtc gcgggtctgg taattttgtg ttttgatggt gttacgctgc ggctctaact
      481 ccgcaaaggc atctagtctg gcatgctgac cgacggcgag aataatttta tctgccgcca
      541 tcgtcagttc gcccgataac cgtacatgct taaacgtgac tttattgcct tccacggcta
      601 ctggcgtgaa tccatcgatg atcgaaacgc ccagctcccg ggcgctggta aactcttttt
      661 cgcttgccgg aaactcatct aactcttcac gcgctacgca agttaccgcc tgacagccga
      721 gaactttcag cgtgctggct acgtccatcg tgacatcacc gccgccgata attaatgcgc
      781 tttgtggaat gctgatatcg ccttgcgcct gtcgtgcacg ttgcaagaag tcgacggcaa
      841 tctcaacgtc actatgctca aacagcggta gcccggaacc gcttgataac cccacggtga
      901 ccagtaccgc gcggttttct gctttcagct gctcaagggt gagtgtgtta ccgacttcgt
      961 tgttgcactt aatggtcacg cccatttttt caatacgggc gatctctgca tccagtactg
     1021 attgcggtaa ccggaattgc ggaatgccgt tacgcaacca gccaccgggt tgtgcttctt
     1081 tctcatagat cgtgacgtca taaccctggt ttgtcagtgt cacactggcc tgcaatccgg
     1141 caggacctgc gccaataatc gcgactttgc cgagcgtttt agtaccgggc tgataaattt
     1201 ccatcccggt ttgttgttca aaatcagtaa caaaacgctg taagcggccg atatcaatgg
     1261 gagcatcaac accggcacgg gtacaaccgc tttggcataa tttctccgtc gggcacactc
     1321 tggcacaaac ggcaccgagg gcattatttt cgcgaattgt ctcggcagcg cctttaaaat
     1381 tacgaaagta gattgagcga ataaatttcc ccggatcggt ctgtgccggg caagcctgac
     1441 tacagggagc gtcgtgacat aataaacagc gagaggcttc tttaatcgcc agtaacggcg
     1501 taaaagccgg agtgagttca tccagataat tttgttgcgg catgtgatct tccttaatgc
     1561 tatgagtaat taaggcgaac gctaaatata ctcgtcatac ttcaagttgc atgtgctgcg
     1621 tctgcgggtt attcggccca tccatgggcc tcacccctta tggggccgct gcaggcagcg
     1681 ttcaaatccg ctccatgcgg atttgtcgct caccccagtc acttacttat gtaagctcct
     1741 ggggactcac tcacttgtcg ccttcctgca actcgaatta tttagagtat aaatattgcg
     1801 tgctgatatt aaggctatgc gcgtggggaa atttatactg tgaaaggatt cacaaatagc
     1861 tgcggttcag aatgttatat ccgcagctta ttgagtgaag taataattat tctcaataat
     1921 taacagaaaa gagaaaatat taacgataga aaataagata aacaatcatg ccgatagata
     1981 aaattccgaa gccgatatat gccaccatat aagcgaaaaa gagtccggga ttttttgctc
     2041 gccagacata caccggttcc ggtgcatttt taacccgttt atcaatcgcg cctgcgcgcc
     2101 agcctttcca tgcttcgcgg aaacaaaata tcggaataag gaaaaaaacg gcaacgacaa
     2161 aaaactgctg tacatccata actactttcc ttgtttcttt tgtaattcaa gtaactgttc
     2221 gggtgtgacg gcgggatacc cctgcgcatc ttccggcacc tggtgcatag ccggaatagg
     2281 gaccagcggc cctaaaaaac gcggttcacg tttaaaaata taaaggtcag ccagcgcacc
     2341 gaaacgggcg gcaaattcgc gaatacgtac tgacagcata tctttcggtg acggtacggc
     2401 ataacactga gcctgaatcc ccatatgcag cgcaataaat aatgcccgct cacagtggaa
     2461 acgttgggtg ataataatga aatcattagt atcgaaaact ttgcgtgtac gcacgatgga
     2521 atccagcgta cgaaagcctg cgtaatcgag aacaatatct gatgggtcga caccagcagc
     2581 gattaaatct ttgcgcatgg tcatcggctc attataactt tgcaatgcgt tatcgccgct
     2641 cagtaataga taatttacct taccgctgtt ataggcatta atcgctcctt gaatgcggta
     2701 gcgataatac tgattaatta cgccagtacg ataatatttt gctgttccga gcaccacacc
     2761 gacctggcgg taggggagat cctgcaattc gtcgtagata taaggcgcgg ttttccagct
     2821 catccagcga tcgaggccga gcacagtcaa caacagcaag ccgatcagga ctaacaggct
     2881 gaggaacacg cgctttaaca tgcaggagac tcgatctaag gaaaatttcc atcaggctac
     2941 tttacccgct ggttttgcgc aagaaacggc aaactgtttg ccgggaattt cgacaccagg
     3001 agagggctgg caagccggac aaggcgttca cgccgcatcc ggcaccaggc ttaagcgaga
     3061 agcactcggt cgatactgtg acagccgaga gctttcagcg ttgcggaggt ggcatcccac
     3121 tgaatcaacg gcgcatcggc tttttctgcc agaaccgcgc gctggatatc cgggtaatca
     3181 taacccttga gattcaacag aattaacgct ccctgcaacg gtggcagagt cgggttgaat
     3241 gcggcgtttt cagcgtagct gccactgaaa atacgaccgt ctttacattc cagcgcgaca
     3301 ccgcttggcg acttactgta aggcatgtgc gaacggtttg ccgctgcaat cgccgcctga
     3361 gaaagcgcat caccagtcag cgcatagccg tgatcctgct cgtccatcag cagcgtttta
     3421 atctccagat ctttcggccc aaaggcatcc ggcagatagt cacgcagcgc gtgtgcctcg
     3481 cggcccggca gatgaatacg cagatccaga ccgctgttca gttcattcat aaactgacgg
     3541 cagtgaccac aaggcgtgta gttaacggtg atggctgcaa gcgctttttc accactcaac
     3601 caggcgtggc tgatcgcgct ttgttcggca tgaacggttt gctgcattgt cgcaccaata
     3661 aattccatat tggcaccgaa ataccaggtt ccgctcacac cgcgcgcaat tgcgccaaca
     3721 ttaaaattcg acaatggcgt acgcgcacag gccgctgcca gcggaagtag tgcgaatgcc
     3781 agcgcgtctt cgtccagccc cgttgcgctc ttcagcgatg agacttgctc cccggtcaac
     3841 aaagcgggga agtacttgtc tgccagaata ggttccagtg cagattgcaa gttatccgca
     3901 agttgggcaa aagcggtttg aaaacgtgga tgcatggcgt tgcctcataa tcatgtaatg
     3961 ggataacagt ttacgaaccc gttatggctt tatatgtgat ctgaatctca ttaattatgc
     4021 aacgcgtgaa acttacatca aaaatgcgcg acgcatcgca aattttagcc cattactgcc
     4081 agaataatcg ggaaaaggaa cggtgcgatc agcgaagtaa ttatcccgca taacaccagc
     4141 gctagcgaac taaatgcacc ttcctgataa tccagctcgg cgcagcgcgc cgtaccgagg
     4201 gcgtgcgagg cagtccccat tgccagaccg cgcgcagctt tggtacgaat atgcatcgca
     4261 ttaagcaatg tatggccaaa taccgcgccg aggatgccga cgaaaatcac gcaaactgcg
     4321 ctgattgccg gaataccgcc aatactgccg ccaaccgcca ttgcaatagg cgtggtgact
     4381 gatttcggca ggattgacgc ggcgatttcc ggtgaagcgc ccatcaacaa tgccacggaa
     4441 gtccccgtca ccatcgcaac cacgctgccg ataaaacaga tggtgatgat cgatttccag
     4501 cgcgcgcgga tctggtgtag ctgctcatat aaaggatagg ccagcgcgac gaccgccggt
     4561 tgcagcagat cgtttagcac ttcgctacct ttaaagtagc tgtcgtaaga gatgccggtc
     4621 agcattaaaa aagggatgat caccaccatt gctaccagca acgggttaag caagggaaac
     4681 ttataccgtg ccgccagttt gcgggcggca aaaaagacga tcaatgtcag tggtaatgac
     4741 caccagatat tagccatcat tcttctgatc ctttctgacc tacgacttta cgttcaccgt
     4801 gcaccagttg cgaactccag ctcaccacca gaaaaaccac cagtgtactg acagcacagg
     4861 aaaccactac cgggccaaac tgtgcgcgga gcaaatcaaa atattgcatg acgcctacgc
     4921 caatcggcac aaacaatagc gccatatagc gaatcagtac gtagcacccc ggattgaccc
     4981 attttgccgg aagaatttgc aaggccagca ggacaaacag gatcagcatc ccgatgatgc
     5041 tgcccggaat ggttaccggt agcagggaag caatgaaaat gcctgcatac aggcaggcat
     5101 aaatcaggac gaaagcgcgt aaatattgcc agataatgtt cagtgtctta ctcataatca
     5161 acaccccaga tgagatgaat tcatcataca attaattcgt aaaacgtgct accgatcaca
     5221 ttaagaaatc agcgcttatt ttttcgctcc ccggcattac gcaatgcgca acgaactcag
     5281 gcatacatca agcatagaga gggattacag tttgcagcaa tccctctttg cagaccttta
     5341 atccgttgac cataggcgct aacatagcgc ctcatttttt tgcgggtgaa gatatgcgtg
     5401 tgttactggc tccgatggag ggtgtgcttg actctctggt gcgtgaattg ctgaccgaag
     5461 ttaacgacta cgatctgtgc atcaccgagt ttgtccgcgt ggtggatcaa ctgctgccgg
     5521 taaaagtttt tcatcgcatt tgccctgagc tacaaaacgc cagccggaca ccatccggta
     5581 cgctggtgcg cgtgcagttg ttgggtcagt tcccacaatg gctggcagag aatgccgccc
     5641 gtgcggtgga attaggttcc tggggcgtgg atctcaattg cggctgcccg tcgaaaacgg
     5701 tcaacggtag cggtggtggg gcgacgttac tcaaagatcc tgaactcatc tactagggtg
     5761 caaaagcgat gcgtgaagct gtaccggcgc atttgcccgt cagcgtgaaa gtgcgtctgg
     5821 gctgggacag cggtgagaag aaatttgaaa tcgccgatgc ggttcaacag gctggtgcta
     5881 cggagctggt ggtgcatgga cggacaaaag agcagggtta ccgcgcggag catattgact
     5941 ggcaggcgat tggcgagatt cgccagcggc tgaatattcc ggtgattgcc aacggtgaaa
     6001 tctgggactg gcagagtgcg caacaatgta tggcgatcag cggctgcgac gcagtgatga
     6061 ttggtcgcgg ggcgctcaat attcccaacc tgagccgggt ggtaaaatat aacgaaccgc
     6121 gaatgccgtg gccggaggtg gttgctttgc tgcaaaaata tacccgtctg gaaaagcagg
     6181 gcgataccgg gttatatcac gttgcgcgga ttaaacagtg gttgagttat ttgcgtaaag
     6241 aatacgatga agcaacggaa ttatttcagc atgttcgggt gttgaataat tcccctgata
     6301 ttgcaagggc tattcaggca attgatatcg ataagctgcg ataatagtgg aatcgcagtt
     6361 tatcagagac aatgaatcgc ttattcagct tcatcatctt gttgcgctcc tttcatgagc
     6421 taagccacat attgccactg gcgcaaggag cgcgcagggg gaggacaatc gcctcctccc
     6481 cctgcccccc cgggctctgg cgaacaaaat cgccgctgcg cggtaccttc agcttatccc
     6541 cttcggctac cgggtcgggc gcgaggtaac gtccttgtaa gacgcgccct cagcccacat
     6601 ccatgtgggc tgccccggcc ttcggggaac gcttcagcga ttttgacgcc accaacaccg
     6661 gagctgtttg caaatcaagt acacaaaata tctagttcct gacctgacaa cttatatgcc
     6721 atatctgatt tttaaaatat catcttaaat acgccagtca ccaccagtag cccaatcagg
     6781 aaaataatca atacagccca gagtataatt ttcattggcg ttcctttatt tgtgagtgtt
     6841 gaataagtat aggaaaaaac gaagcccttt gccgttatcc ataaacgatt aagataaatc
     6901 ggaagatatc attcacttag tctatatttt tctgggtatg tcgttttatt gctactgatg
     6961 tattgccacg cgaaactaaa aaatatatcg caacacacgg taatctccgc gcacc
//
LOCUS       DADMJE010000187         7014 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.190, whole genome shotgun sequence.
ACCESSION   DADMJE010000187 DADMJE010000000
VERSION     DADMJE010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 7014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7014
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.190"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..247
                     /locus_tag="JN001_003648"
     CDS             <1..247
                     /locus_tag="JN001_003648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054734.1"
                     /translation="HARLFGFTAEDIMDFWQHKAPQKYSAFELAFEFGHRVIAELILN
                     TLNKMAESFGFTDNPRYIAEKNYMEALLKKASPHTVR"
     gene            complement(216..1940)
                     /gene="aceK"
                     /locus_tag="JN001_003649"
     CDS             complement(216..1940)
                     /gene="aceK"
                     /locus_tag="JN001_003649"
                     /EC_number="2.7.11.5"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional isocitrate dehydrogenase
                     kinase/phosphatase"
                     /protein_id="HAY9054735.1"
                     /translation="MPRGLELLIAQTILQGFDAQYGRFLEVTSGAQQRFEQADWHAVQ
                     LAMKNRIHLYDHHVGLVVEQLRCITNGQSTDAAFLLRVKEHYTRLLPDYPRFEIAESF
                     FNSVYCRLFDHRSLTPERLFIFSSQPERRFRTIPRPLAKDFHPDHGWESLLMRVISDL
                     PLRLRWQNKSRDIHYIIRHLTETLGTDNLAESHLQVANELFYRNKAAWLVGKLITPSG
                     TLPFLLPIHQTDDGELFIDTCLTTTAEASIVFGFARSYFMVYAALVEWLREILPGKTT
                     AELYMAIGCQKHAKTESYREYLVYLQGCNEQFIEAPGIRGMVMLVFTLPGFDRVFKVI
                     KDKFAPQKEMSAAHVRACYQLVKEHDRVGRMADTQEFENFVLEKRHISPALMELLLQE
                     AAEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIF
                     PGDMLFKNFGVTRHGRVVFYDYDEICYMTEVNFRDIPPPRYPEDELASEPWYSVSPGD
                     VFPEEFRHWLCADPRIGPLFEEMHADLFRADYWRALQNRIREGHVEDVYAYRRRQRFS
                     VRYGEMLF"
     gene            complement(2221..3518)
                     /gene="aceA"
                     /locus_tag="JN001_003650"
                     /pseudo
     CDS             complement(2221..3518)
                     /gene="aceA"
                     /locus_tag="JN001_003650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418439.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase"
     gene            complement(3548..5149)
                     /gene="aceB"
                     /locus_tag="JN001_003651"
     CDS             complement(3548..5149)
                     /gene="aceB"
                     /locus_tag="JN001_003651"
                     /EC_number="2.3.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate synthase A"
                     /protein_id="HAY9054736.1"
                     /translation="MTEQATTTDELAFTRPYGEQEKQILTAEAVEFLTELVTHFTPQR
                     NKLLAARIQQQQDIDNGTLPDFISETASICDADWKIRGIPADLEDRRVEITGPVERKM
                     VINALNANVKVFMADFEDSLAPDWNKVIDGQINLRDAVNGTISYTNEAGKIYQLKPNP
                     AVLICRVRGLHLPEKHVTWRGEAIPGSLFDFALYFFHNYQALLAKGSGPYFYLPKTQS
                     WQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLNCGR
                     WDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAFI
                     PSKDEEHNNQVLNKVKADKSLEANNGHDGTWIAHPGLADTAMAVFNDILGSRKNQLEV
                     MREQDAPITADQLLAPCDGERTEEGMRANIRVAVQYIEAWISGNGCVPIYGLMEDAAT
                     AEISRTSIWQWIHHQKMLSNGKPVTKALFRQMLGEEMKVIASELGEERFSQGRFGDAA
                     RLMEQITTSDELIDFLTLPGYCLLA"
     gene            complement(5418..6347)
                     /gene="metA"
                     /locus_tag="JN001_003652"
     CDS             complement(5418..6347)
                     /gene="metA"
                     /locus_tag="JN001_003652"
                     /EC_number="2.3.1.46"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-succinyltransferase"
                     /protein_id="HAY9054737.1"
                     /translation="MPIRVPDELPAVNFLREENVFVMTTSRASGQEIRPLKVLILNLM
                     PKKIETENQFLRLLSNSPLQVDIQLLRIDSRESRNTPAEHLNNFYCNFEDIQEQNFDG
                     LIVTGAPLGLVEFNDVAYWPQIKQVLEWSKDHVTSTLFVCWAVQAALNILYGIPKQTR
                     TDKLSGVYEHHILHPHALLTRGFDDSFLAPHSRYADFPAALIRDYTDLEILAETEEGD
                     AYLFASKDKRIAFVTGHPEYDAQTLAQEYFRDVEAGLDPEVPYNYFPHNDPQNTPRAS
                     WRSHGNLLFTNWLNYYVYQITPYDLRHMNPTLD"
     gene            6504..6951
                     /locus_tag="JN001_003653"
                     /pseudo
     CDS             6504..6951
                     /locus_tag="JN001_003653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312957.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acetyltransferase"
BASE COUNT         1682 a         1803 c         1820 g         1709 t
ORIGIN      
        1 ccatgcacgc ctgtttggat ttaccgctga agatattatg gatttttggc aacacaaagc
       61 gccacaaaaa tactctgcct ttgagttggc ttttgaattt ggtcaccggg ttattgctga
      121 attaatcctt aatacattaa ataagatggc tgaaagcttt ggctttacgg ataaccctcg
      181 atacattgcg gagaaaaatt atatggaagc tttactcaaa aaagcatctc cccataccgt
      241 acgctaaatc tttgcctgcg ccgatacgca taaacatctt ccacatgccc ttcacgtatg
      301 cggttttgta gtgcgcgcca gtaatcagcg cggaacaggt cggcgtgcat ctcttcaaac
      361 agcggaccaa tacgcgggtc ggcgcatagc cagtggcgaa actcttccgg gaaaacatcg
      421 cccggcgaga cgctgtacca cggttcgctg gcaagttcgt cttccggata gcgcggcggc
      481 gggatgtcgc ggaaattcac ttccgtcatg tagcaaattt catcgtaatc ataaaaaacc
      541 acacgcccgt gacgggtgac accgaagttt ttaaacagca tgtcgccagg aaaaatgtta
      601 gcagcggcaa gctggcgaat agcgttaccg tattcttcaa tggcgtcgcg caactgctga
      661 ccttccactt gttccagcca gatattgagc ggcaccatcc gccgctcgat atagagatgg
      721 cgaattacaa tctgctcacc aagatcggtg attttttccg ctgcttcctg gagcagtaat
      781 tccattaatg ccggggaaat atgccgcttc tccagcacaa agttttcaaa ctcctgggtg
      841 tccgccattc ggcccacacg gtcgtgctct ttcaccagtt gatagcaggc acgaacgtga
      901 gcggcagaca tctctttctg cggcgcgaac ttgtctttga tgactttgaa tacccgatca
      961 aagcccggca gcgtaaacac caacatcacc attccacgaa tacccggcgc ttcaatgaac
     1021 tgctcattac agccctgtag ataaacgaga tattcgcggt agctttcggt tttggcgtgc
     1081 ttctggcagc cgatagccat atacaattca gcagtggttt tacctggcag aatttcccgt
     1141 agccactcga ccagcgctgc ataaaccata aaataagaac gcgcaaagcc aaaaacaatg
     1201 ctcgcttcgg cggtcgtcgt caggcaggta tcaataaata actcgccgtc gtccgtctgg
     1261 tggatcggca gtaagaaggg caacgtgccg gaaggcgtga tcagtttgcc caccagccag
     1321 gcggctttat tgcggtaaaa cagttcgttc gccacctgta aatgactttc cgcgaggttg
     1381 tctgtcccca gcgtttccgt cagatggcga atgatgtaat gaatgtcacg gcttttattc
     1441 tgccagcgca ggcgcagcgg caggtcgctg ataacgcgca tcagtagaga ttcccagccg
     1501 tgatcggggt gaaagtcttt cgccagcggg cggggaatgg tacgaaagcg gcgctctggc
     1561 tgagagctaa agataaaaag ccgctcggga gtaagcgagc ggtggtcaaa taaccgacag
     1621 tacacggagt taaaaaagct ctccgcaatc tcgaagcgcg ggtaatccgg caacagccgc
     1681 gtgtaatgct ctttaacgcg cagtaaaaat gccgcgtccg tactttggcc gttagtaatg
     1741 cagcgcagtt gctccacgac cagaccaacg tgatgatcgt aaagatggat acggtttttc
     1801 atcgccagct ggacagcatg ccagtcggcc tgttcgaaac gctgctgcgc cccggaagtc
     1861 acttcgagga atcgaccata ctgagcgtcg aagccttgca aaatggtttg agcaatcagt
     1921 aattccaggc cacgcggcat ttagcgccct catcaggagc agagaattgc cggatgcggc
     1981 gtaaacgcct tatccagcct acgttcggca acggttgtag gcatgataag acgcgcaagc
     2041 gtcgcatcag gcatcgtgca ccgattgccg gatgcggcgt aaatgcctta tccggcctac
     2101 gttcggcaac ggctgtaggc atgataagac gcgcaagcgt cgcatcaggc atcgtgcacc
     2161 gattgccgga tgcggcgtga acgccttatc cggcctacag tcagcaacgg ttgttgttgc
     2221 ttagaactgc gattcttcag tggagccggt cagcgcggtg actgaagacg tgccgccctg
     2281 aataatagtc gtcactttat cgaagtaacc tgtacccact tcctgctggt gagatacgaa
     2341 ggtatagcca tctttcgcgg cggcaaattc cggctgctgc actttctcaa cgtagtgctt
     2401 cataccctcg ccctggtcat aggcgtttgc caggtcaaac atgttgaacc acatgctgtg
     2461 gatacctgcc agggtgatga actggaactt gtagcccata tccgacagct gctgctggaa
     2521 gctggcaata gttttgtcgt cgaggttttt ctgccagttg aacgacggcg agcagttata
     2581 agccagcagt ttgcccggat atttcgcgtg gatagcttgt gcaaagcgac gcgccagttc
     2641 cagatccggc gtggaggttt cacaccagac caggtcagca tatggcgcat acgccaggcc
     2701 acggctgatc gcttgctcaa tgcccgcatg agtacggaag aagccttcac tggtacgctc
     2761 gccggtaata aattcgctgt catacgggtc gcaatcggag gtgatcagat ccgcggcatc
     2821 ggtacgagca accagtaggg ttggaacgcc cgtcacgtca gctgccagac gcgccgcgac
     2881 cagtttctga atagcttctt gagttggcac taaaactttg ccgcccatgt gaccgcattt
     2941 cttcactgac gccagctgat cttcgaagtg aactgccgct gcaccggctt caatcatcgc
     3001 tttcatcagt tcaaaggcat tcaggacacc gccaaaaccg gcttccgcat cggcaacgat
     3061 cggcaggaag taatcgacat agcgcggatc gcccggctca atgcccgcgg accattggat
     3121 ctgatccgca cggcggaaag tattgttgat ccgctccacc acagctggca ccgagtttgc
     3181 cggatagagc gactgatccg gatacatgct ggccgccagg ttagcgtccg ccgctacctg
     3241 ccatcccgac agatagactg cttcaatacc cgctttcgcc tgttgcagcg cctgaccgcc
     3301 agtcagtgca ccgaggctgt tgatgtagct tttttcgact cgccatgcag cagacgccac
     3361 attctcgccg cgcccagttg cgccagggtg cattcaggat tgactgaatc gcgtaatttc
     3421 accacatctt ccgcgctgta tgggcgagta atgccttccc aacgcggttg agtccactct
     3481 ttctgtaatt cttcaatttg ttgtgtacgg gttttcatgt gcagatgctc catagttatg
     3541 tggtggttta cgctaacagg cagtagcctg gcagggtcag gaaatcaatt aactcatcgg
     3601 aagtggtgat ctgttccatc aagcgtgcgg catcgccaaa acgcccctgg gagaaacgtt
     3661 cttcgcccag ttcgctggca atgactttca tctcttcgcc cagcatctgg cggaacaagg
     3721 ctttagttac cggtttgcca ttgctcaaca ttttttgatg atggatccac tgccagattg
     3781 aggtacggga aatttcagcc gtcgccgcat cttccatcag gccataaatc ggcacacagc
     3841 cgttgccaga gatccacgct tcgatgtact gcacggctac gcgaatattt gcgcgcatac
     3901 cttcttcggt gcgttcaccg tcacaaggtg ccagtagctg atcggcagta atcggcgcgt
     3961 cttgttcgcg catcacttca agctgatttt tacgggagcc gagaatgtcg ttgaataccg
     4021 ccattgccgt atccgcaagg cctgggtgag cgatccatgt gccatcgtga ccgttattgg
     4081 cttccagcga tttatccgct tttactttgt tgagcacctg gttattgtgc tcttcatctt
     4141 tgctcggaat aaacgccgcc atgccgccca tcgcaaaagc accgcgttta tggcaggttt
     4201 taatcaacag gcgtgagtaa gcattcagga atggtttatc catcgtcact gcctgtctgt
     4261 ctggcaggac gcgatcggga tagtttttca acgttttgat atagctgaag atgtaatccc
     4321 aacgaccgca gttcagacca acaatatggt cacgcagcgc gtgaaggatt tcatccatct
     4381 ggaacacggc gggcagcgtt tcaatcagca acgtcgcctt gatggtgccg cgcggcagat
     4441 taaagcgatc ttctgcatag ctgaagactt cgctccacca ggccgcttcc tgccaggact
     4501 gggttttcgg cagatagaaa tagggaccac tgccctttgc caacagagcc tgatagttgt
     4561 ggaagaaata gagcgcaaaa tcaaacaggc tgccggggat tgcctcacca cgccaggtga
     4621 catgtttttc cggcaagtgc agaccgcgta cccgacaaat caaaaccgct ggattgggct
     4681 tgagctggta aattttgcct gcttcattgg tatagctgat ggtaccgtta actgcatcac
     4741 gcaggttaat ttgcccgtcg atcactttgt tccagtccgg ggccagtgaa tcttcgaaat
     4801 cggccataaa gactttcaca ttggcgttga gcgcgttgat caccatcttg cgctctaccg
     4861 ggccagttat ctctacgcgg cggtcttcta agtccgcagg aatcccgcga attttccaat
     4921 cagcatcgca aatggaagct gtttccgaaa taaaatcagg caacgttccg ttatcaatat
     4981 cttgctgctg ctgaatgcgc gctgccagaa gtttatttcg ttgtggcgta aaatgcgtca
     5041 ccagctcagt cagaaattct accgcttcgg cagtaagaat ttgcttctcc tgctcgccat
     5101 acggccttgt gaaagccagt tcatcggttg ttgttgcctg ttcagtcatc gtgcagctcc
     5161 tcgtcatgga tccgaaaact tccccactgt gaacgaagga tcgttgtgcg cttttcgttc
     5221 agcacaacta agactactca tttaaaatgc aaaatcaaaa acaatttcca ttttaattga
     5281 aaatgcttga taacttattg ataacaatgt gaataaaatt tattcacctc ctgaggtgcg
     5341 tttcggaaat aaaaaaggca cccgaaggtg cctgaggtaa ggtgctgaat cgcttaacga
     5401 tcgactatca cagaagatta atccagcgtt ggattcatgt gccgtagatc gtatggcgtg
     5461 atctgataga cgtaatagtt gagccagttg gtaaacagca aattaccgtg actacgccag
     5521 ctcgctcgcg gtgtattttg cggatcattg tgcgggaaat agttatacgg tacttccggg
     5581 tctagtccgg cttccacatc gcggaaatat tcctgcgcca gcgtttgcgc atcatattcg
     5641 ggatggcccg tcacaaaggc aatgcgctta tctttgctgg caaacagata tgcatcccct
     5701 tcttccgtct ctgccagaat ttccagatcg gtgtaatcac gaatcaacgc tgccggaaag
     5761 tcagcatagc gcgaatgtgg tgccaggaat gaatcatcaa agccacgcgt cagaagcgca
     5821 tgaggatgga gaatatgatg ctcgtaaacg ccagagagtt tgtcggtgcg agtttgctta
     5881 ggaatgccgt agaggatatt gagcgcggcc tgtaccgccc agcagacaaa cagcgtcgag
     5941 gtgacgtgat ctttcgacca ctccagcacc tgtttgatct gcggccagta agcgacatca
     6001 ttaaactcca ccaggcccag cggcgcaccg gttacaatca gaccgtcaaa gttctgttcc
     6061 tgaatatctt caaagttaca gtagaagttg ttcagatgct ctgcgggcgt gttgcgcgat
     6121 tcacgggaat cgatgcgcaa cagctgaata tcgacctgca aaggtgagtt tgaaagcagg
     6181 cgcagaaact gattttcagt ttcaatcttc ttcggcatca ggttaaggat cagaacctta
     6241 agtggacgaa tttcctgacc agacgcacga gaagttgtca tcacaaagac gttttcttca
     6301 cgcaagaaat tgacggcggg tagctcgtcc ggcacacgaa tcggcataac ctgattacct
     6361 cactacatac acttatacgt ttagacatcc agatagctga agataaccag aaaatttgcc
     6421 aatgtcgagc ctgcatgttg aaggtgagaa agtttcaagg aaaagactac gttagaatat
     6481 aagaatgact aaaaggagag aaaatggtta ttagtattcg ccgctcacgg catgaggaag
     6541 gggaggaact cgttgcgatt tggtgtcgat ctgtcgatgc cacacacgat tttttatcag
     6601 cagagtatcg ggccgagctg gaggtgctag ctagttcgtt ccttcctgcc ggaagcgccg
     6661 ttgtggatcg cggttaatga acgggatcag ccggttgggt ttatgttgtt aagtgggcag
     6721 catatggatg cgctgtttat cgatcctgat gtgtgcggct gcggcgtggg tcggatgctg
     6781 gtggagcatg cgctctcgat ggcaccggaa ctgacaacca acgttaatga gcaaaatgag
     6841 caggcggttg ggttctataa gaaggtgggt tttaaggtta cgggacgctc tgaggtggac
     6901 gatttgggga aaccgtatcc gttgctgaat ctggcgtatg tgggggaata agccgcccct
     6961 gccgtgcctg cccaggctgg agaagacgcg ccagcgtcgc acccggcatt tttt
//
LOCUS       DADMJE010000188         6997 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.191, whole genome shotgun sequence.
ACCESSION   DADMJE010000188 DADMJE010000000
VERSION     DADMJE010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6997)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6997)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6997
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.191"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..374
                     /locus_tag="JN001_003654"
     CDS             <1..374
                     /locus_tag="JN001_003654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001743492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9054738.1"
                     /translation="RPNFPYEFKIALVEQSLQPGACVAQIARENGINDNLLFNWRHQY
                     RKGGLLPSGKNMPALLPVTLTPEPDNKIPAPAQEPEQINTPSDSLCCELVLPAGTLRL
                     KGKLTPALLQILIREIKGSSH"
     gene            374..721
                     /gene="tnpB"
                     /locus_tag="JN001_003655"
     CDS             374..721
                     /gene="tnpB"
                     /locus_tag="JN001_003655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000624623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY9054739.1"
                     /translation="MISFPAGSRIWLVAGITDMRNGFNGLASKVQNVLKDDPFSGHLF
                     IFRGRRGDQIKVLWADSDGLCLFTRRLERGRFVWPVTRDGKVHLTPAQLSMLLEGIDW
                     KHPKRTERAGIRI"
     gene            741..1895
                     /locus_tag="JN001_003656"
                     /pseudo
     CDS             741..1895
                     /locus_tag="JN001_003656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            1899..2058
                     /locus_tag="JN001_003657"
                     /pseudo
     CDS             1899..2058
                     /locus_tag="JN001_003657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            2647..2945
                     /locus_tag="JN001_003658"
                     /pseudo
     CDS             2647..2945
                     /locus_tag="JN001_003658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343747.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            3027..3164
                     /locus_tag="JN001_003659"
                     /pseudo
     CDS             3027..3164
                     /locus_tag="JN001_003659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011787828.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS630 family transposase"
     gene            3534..4211
                     /gene="ospD1"
                     /locus_tag="JN001_003660"
     CDS             3534..4211
                     /gene="ospD1"
                     /locus_tag="JN001_003660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspD1"
                     /protein_id="HAY9054740.1"
                     /translation="MSINNYGLHPANNKNMHLIIGSNTANENKGMKRNIINVTNTAIS
                     HAINEEKSGGGYSGVSFRKLAKIQSISIPTKNNKEYNRHNLFSLIWHGNADAARKYGE
                     SLLAAEIPKEEKLEVLAARNNAGESALFIALQEGHSAAIQAYGDFIKTFDLSPKETIK
                     LLDVRDNEGLPGLFLAAGKGNIEAMMAYINICHHSGIKLTEIADRLNNNEQDMFNIIS
                     DKIQELF"
     gene            4535..4645
                     /locus_tag="JN001_003661"
                     /pseudo
     CDS             4535..4645
                     /locus_tag="JN001_003661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            4723..5037
                     /locus_tag="JN001_003662"
     CDS             4723..5037
                     /locus_tag="JN001_003662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054741.1"
                     /translation="MLQRQRGKVGFAQLPVDFVAIEPDSAQGVGKRANLTNRCFIIRI
                     NDSFKKRQGFIEFISNSGSGHTVTVYTKRRFQRGVFMNSLNTNVVKPVMYRLRSSADA
                     RP"
     gene            5319..5885
                     /locus_tag="JN001_003663"
     CDS             5319..5885
                     /locus_tag="JN001_003663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858157.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054742.1"
                     /translation="MLGTSFNNFGISLSHKRYFSGKVDEIIRCTMGKRIVKISSTKIN
                     TSILSSVSEQIGENITDWKNDEKKVYVSRVVNQCIDKFCAEHSRKIGDNLRKQIFKQV
                     EKDYHISLDINAAQSSINHLVSGSSYFKKKMDELCEGMNRSVKNDTTSNVANLISDQF
                     FEKNVQYIDLKKLRGNMSDYITNLESPF"
     gene            complement(6090..6206)
                     /locus_tag="JN001_003664"
                     /pseudo
     CDS             complement(6090..6206)
                     /locus_tag="JN001_003664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004989794.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            6412..6966
                     /locus_tag="JN001_003665"
                     /pseudo
     CDS             6412..6966
                     /locus_tag="JN001_003665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3-like element IS3H family transposase"
BASE COUNT         2050 a         1518 c         1643 g         1786 t
ORIGIN      
        1 ggcggcctaa ttttccttat gaatttaaaa tcgccttagt ggagcagtca ctgcagcccg
       61 gagcctgtgt ggcgcagatc gcccgtgaaa acggaatcaa cgataacctg ctcttcaact
      121 ggcgccatca ataccggaaa ggtggcctgc tgccttccgg aaaaaatatg cctgcactgc
      181 ttcccgtgac gttaacgccg gagccggata ataaaatccc ggctccggca caggaaccag
      241 agcagataaa tacaccgtcc gacagtctgt gctgtgagct ggttctgccg gccggaactc
      301 tcaggcttaa aggtaaactg acgccggcgt tattacagat acttatccgc gaaataaaag
      361 ggagcagcca ctgatgatat ctttccctgc aggttcgcgt atctggctgg ttgcaggtat
      421 caccgatatg cgaaatggct ttaacggcct ggcctcaaaa gttcagaacg tcctgaagga
      481 tgacccgttc tccgggcatc tgttcatctt ccgcggacgc cggggtgacc agataaaagt
      541 gttgtgggct gacagtgacg gactgtgcct ctttaccaga cgcctggagc ggggccgctt
      601 cgtctggccg gtcacccgtg acggcaaggt gcaccttact ccggcccagt tatccatgct
      661 tcttgagggc atcgactgga aacacccgaa acgaacggaa cgcgctggca tccgcatata
      721 acccgttgta aagtgaggat atggacacct cacttgctca tgagaatgcc cgcctgcggg
      781 cactgttgca gacgcaacag gacaccatcc gccagatggc gaaatacaac cgcctgctct
      841 cacagcgggt ggcggcttat gcttccgaaa tcaaccggct gaaggcgctg gttgcgaaac
      901 tgcagcgcat gcagttcggt taaagctcag aaaaacttcg cgcaaaaacc gaacggcaga
      961 tactggaagc acaggagcga atcagcgcac ttcaggaaga aatggcggaa acgctgggtg
     1021 agcaatatga cccggtactg ccatctcccc tgcgccagtc ttcagcccgt aaaccgttac
     1081 ctgcctcact tccccgtgaa acccgggtca tccgtccgga agaggaatgc tgcccggcct
     1141 gtggtggcga actcagttct ctgggatgtg atgtgtcaga gcagctggag cttatcagca
     1201 gcgcctttaa ggttatcgaa acacaacgtc cgaaactggc ctgttgccgg tgtgaccata
     1261 tcgtgcaggc accggtgcct tcaaaaccca ttgcacgcag ttatgccgga gcggggcttc
     1321 tggcccatgt tgtcgctgga aaatatgcag gctatctgcc gttataccgc cagtcagaaa
     1381 tataacgtcg tcagggcgtg gagctgagcc gtgccacact gggtcgctgg accggtgccg
     1441 ttgctgaact gctggagccg ctgtatgacg tcctgcgcca gtatgtgctg atgcccggta
     1501 aagttcatgc ggatgatatc cccgttccgg tccaggagcc gggcagtggt aaaacaagaa
     1561 ctgcccggct gtgggtctat gtccgtgatg accgtaacgc cggttcggaa atgcctccgg
     1621 cggtctggtt cgcgtactca ccggaccgga aaggtatcca tccacagaat catctggccg
     1681 gttacagcgg agtgcttcag gccgatgctt acggtggtta ccgggcgttg tacgaatccg
     1741 gcagaataac ggaagccctg ctgcgtatcg gtgaactgta tgccatcgag gcagaagtcc
     1801 ggggatgttc agcagaacag cgtctggcgg caagaaaagc cagagccgcg ccactgatgc
     1861 agtcactgta tgactggata cagcaacaga tgaaaattca ttcgctgaaa atggaatgtc
     1921 tccacggaga acactattat ccatcgggaa atagtgcggg caacagtgtt tagttatatc
     1981 gagtgcgatt acaatcgctg gcgacggcac cgttggtgtg gtggtctcag tccggaacaa
     2041 tttgaaaacc agagcctcac ttacgactgt gtccatatta tgtgggtagg atcaataaag
     2101 acgttttata tgtgtctgct tgcagccaga aaatttatac cctgcaggta tcataaacat
     2161 gcttgacaac ttaattaggg ccccctcttc cttttatggt gtaattgttt gattgaatac
     2221 ttccggggat ttcagtatga aatgaagtat atttaatata ctttacaaaa agtttgtatt
     2281 agtggaataa gaacaatagt ttatccaaac tgccaagccc ctttattata agtaagatct
     2341 ggcactggaa tattctcaaa aggactaaca tcatcaccac gaccttcaac caaccataaa
     2401 aaacaatact attttaggtg atgtattaaa ttagtagaat atttattctt ctataaaagc
     2461 actaccccaa gaggttaatc aggtcatcca tgattattta tcatatacta actatgtggg
     2521 atttcaacgt gaaaacttat tttcactata atcttcagga ttcgaagatc ataggagcct
     2581 gtacataagt ttgtataatt ctctgatgtt gaactattta atttgatatc aaatgaaggt
     2641 gaatttatga atgaaaaaca gttgacatct aataagttgc gggctttagc taatgaacta
     2701 gccaaaagtc tcaaaaatcc tgaagatctc agtcagtttg attggatgct gaaaatgaaa
     2761 ccgtactcaa tgctaatatg actcatcatc ttgggtgcga gaaaaatcag cttagatctg
     2821 gcagcaattc ccgcaatggt tgcttaacga agattatcac tactggagat gaacctctgg
     2881 aaatccgtac tctgcgtgat cgtaatggca ctttcgaacc gcaacagctg aagaaaaacc
     2941 agccctagat tactaaatct gtcgggcgat ggattaactg gttcaggctg tctggtgctg
     3001 aaggcctgaa gtcactgctg tcagtgatgt ggccggctct tcatgagaca ataacccgta
     3061 atcatcagtg ccgttcaata tggccactgt tgaaaaaagt tcgtcacttt atggagacgg
     3121 ttagcccact tcccggagaa aaacatagtc tggccaaagt gtagcggtat taggctcaca
     3181 tatttagatg tagataagcc ggagcaggca gttaaatcta ggcagcatca cagaaatgga
     3241 caacgcccct taaggactgg cgtatggcaa tgagctgctt tattatcaag tttggtgatc
     3301 gccttgacgg tcacttctga gtgaaggcgc ttgcacagaa tggtaaacgg actcgattat
     3361 tgaatcttag ggataagata tatctacgat atgtcaatat acgaaatcga aagaatttat
     3421 tggtgaatat agccattcaa tgtggcaatg gtttttttag attagcaata gactaatatc
     3481 tattacatta caaaaatagg ttattgtttt tttagcaaaa aggatgaaca aaaatgtcaa
     3541 taaataacta tggattacat ccagcaaaca acaaaaatat gcacctaata ataggcagca
     3601 atactgctaa tgaaaataaa ggaatgaaac gtaatatcat taacgtgaca aataccgcta
     3661 tatcccacgc catcaatgaa gaaaaatcag gggggggata tagtggtgtt tctttcagaa
     3721 aattggccaa aatacagagc atatccattc cgacaaagaa taataaggag tataaccgcc
     3781 ataatttgtt ttcattgatt tggcatggaa atgctgatgc agcgcgtaaa tacggtgaat
     3841 cgctgttggc agccgaaata cccaaagagg aaaaactaga agttcttgca gcacgaaata
     3901 atgctgggga atctgctttg ttcatagctc ttcaagaagg tcattccgct gcgattcaag
     3961 cttatggaga ttttattaaa acttttgatt tatcaccaaa agaaacgatt aaactattgg
     4021 atgtaagaga taatgagggg ttaccaggat tatttctggc cgcagggaaa gggaatatcg
     4081 aggctatgat ggcatatata aatatatgcc atcatagtgg gataaaactt acagaaatag
     4141 cagacagact taacaataat gaacaagaca tgtttaatat tatttctgac aaaatacaag
     4201 agttgtttta agtgtgctaa atagctgcaa agaattgcac ttagaaggag ctctccccga
     4261 attgtgtgat ctgcttaatt tctaaaaaga aacaaacagt taactagact gagcgatact
     4321 acccatagaa ccagtttccc atgacgaacg acactggacg caaaaacaat cataaaaaac
     4381 acaataaatg taatgaacac atcccaccct attaagtaaa gtgcactgtg atagaggaag
     4441 ggaaatacag gaaggtgtgg agccttgcag atttctggca tcatagtgcc caatacggaa
     4501 tgcataaagc cccctcagac tggagactcc acaaatgaaa tatacagtgt ttaattatat
     4561 caagtgcgat tacaatcgct gacgacggca cagttggtgt ggaggtctca gtcctgaaca
     4621 atttgaaaac cagaacctca cttaagcctg tgttcatatt acgtgggtag gatcatactt
     4681 ttatagaagc tgtcagtggc tacgtcccag ctaaatcact tcatgctcca gcgccagaga
     4741 ggcaaggttg ggtttgctca gctgccggtt gattttgttg cgattgaacc ggacagcgcc
     4801 cagggtgtcg gcaaaagagc gaatctcacc aatcgttgtt tcattatccg cattaacgat
     4861 agcttcaaga aacgccaagg ttttatcgaa ttcatcagca acagtggctc cgggcatacc
     4921 gtgaccgttt atacaaaaag gcgttttcag cgtggagttt tcatgaatag cctcaacacg
     4981 aatgtcgtga agccagtgat gtatcggcta cgatcctcag ctgatgccag accataggac
     5041 tgacactacg aacagcaatt ttaatgacgt aaatcttcat aactacaact aacagggcat
     5101 cattatgaat gatgccggtt attttaccgc tgttggtccc ttcatttagg gactgcccca
     5161 agttttttca tactctcttt ctcagagagt ttagtctctg ggattccaga cggtccatca
     5221 ttgagccaag ggagtaaaga actcaaagca tttacagaat tgtttgaatc agctaaaata
     5281 atgacaatgt tactatttta catgacaaag tgattataat gcttggaaca tcttttaata
     5341 attttggaat cagtttatct cacaaaagat atttttcagg aaaggttgat gagattatcc
     5401 gctgtacaat ggggaaaagg atagtaaaaa tatcatcaac caaaataaat actagtattt
     5461 tgagctctgt ttcagaacaa atcggtgaaa atattacaga ttggaaaaat gatgaaaaaa
     5521 aagtctacgt atcccgggtg gtaaaccaat gtattgataa gttttgtgca gaacacagcc
     5581 gaaaaatcgg cgataatctc cgtaaacaga tatttaaaca ggttgagaaa gattatcaca
     5641 tttctctaga catcaatgct gcacaaagtt ccataaatca tcttgtatca ggaagcagtt
     5701 atttcaaaaa gaaaatggac gaactttgtg aagggatgaa tagaagcgtt aaaaatgata
     5761 caacaagcaa tgttgcaaat cttatttccg atcagttttt tgagaaaaat gtgcaatata
     5821 ttgatctaaa gaaattacgt gggaatatga gtgattatat tacaaattta gaatcgcctt
     5881 tctgatgaca gaacatcccg agtaaagaaa ctaagaaaag taaataccca ggaattgcct
     5941 gagcggtgct atatttctcc tcgcaagtaa gtcctaatat attgaattgt tgtatagcca
     6001 gtttttgtat tttcctagct catggatgtg ggatccctct cccctttctc tgctcaaagg
     6061 taagcggctc gtcagaatca tattgatatt tactgagaag tcagatcaac tttccaaggc
     6121 aacagatcgc gtacccggtt tgccggtcag tcctggatat gttcaataac gtaacgcagc
     6181 catttttctg gctccacatt gttcagacgg catgtgccga tcagcgagaa caacaccgct
     6241 gcatgttcgt caccgctgtc ggaacctgcg agtcgagtca gccggagaga gtttcactct
     6301 ccggctgctc acggaaccgt acgtgacact ctcgcgtcat acggctcttg atcactcatt
     6361 cgatgcacgt agtaaatacc agtgagcaaa ttgatcttac ccagcaatac ggtcagttac
     6421 cgcgcacatg gcctgcctgt gtcagaaaat ctgctggagc aggattttta cgccagtggt
     6481 ccgaaccaga agtgggcggg agacatcacg tacttacgta cagatgaagg ctggctgtat
     6541 ctggctgtgg tcattgacct gtggtcacgt gccgttattg gctggtccat gtcaccacgc
     6601 ctgacggcgc aactggcctg cgatgccctg cagatggcgc tgtggcggcg taagagaccc
     6661 cggaacgtta tcgttcactc ggaccgagga agtcagtact gttcagcaga ttatcaggcg
     6721 ctgctgaagt ggcataatct gcgtggcagt atgagcgcaa agggctgctg ctacgataat
     6781 gcctgcgtgg aaagcttctt tcattcgctg aaagtggaat gtctccacgg agaacacttt
     6841 atcagccggg aaataatgcg ggcaacagtg tttaattata tcgaatgtga ttacaatcgc
     6901 tggcgacggc acagttggtg tggcggcctc agtccggaac aatttgaaaa ccagaacctc
     6961 gcttaggcct gtgtccatat tacgtgggta ggatcac
//
LOCUS       DADMJE010000189         6966 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.192, whole genome shotgun sequence.
ACCESSION   DADMJE010000189 DADMJE010000000
VERSION     DADMJE010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6966)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6966)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6966
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.192"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1471
                     /locus_tag="JN001_003666"
     CDS             <1..1471
                     /locus_tag="JN001_003666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054743.1"
                     /translation="VLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTC
                     RQYVQQLSQALWLSGISQPLIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHA
                     RASHYHAGECLRQLAALNSRLNCAQEMARRDSVGEVPPVPWRTVVGSGIAGEAKLDHL
                     RLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQENSPAATRRLFSFQAG
                     ALAGGQIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYL
                     RQRPPACIRPLNQVDNLFILPVAECISLGWDSGRQTLDAQVISGEGEDNLLTLSLPAS
                     ACSPFAVERMAALLQQTDDPVSLVSGFVSFVEGQLTLEPRVMMTKTRAWALDAETAPV
                     APLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAISQAELLANDLTAVGFY
                     RLAHVLVQFRNTESEARVEAMNNGVLLCEQLFPMLQQQG"
     gene            1596..2057
                     /locus_tag="JN001_003667"
     CDS             1596..2057
                     /locus_tag="JN001_003667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416627.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HAY9054744.1"
                     /translation="MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAIT
                     YVYKGDKVLKQSSETKIQFASISATTKEDAAKTLEPLSAKYKNIAGVEEKLTYTDTYA
                     QENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK"
     gene            complement(2098..2568)
                     /locus_tag="JN001_003668"
     CDS             complement(2098..2568)
                     /locus_tag="JN001_003668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1456 family protein"
                     /protein_id="HAY9054745.1"
                     /translation="MLSNDILRSVRYILKANNNDLVRILALGNVEATAEQIAVWLRKE
                     DEEGFQRCPDIVLSSFLNGLIYEKRGKDESAPALEPERRINNNIVLKKLRIAFSLKTD
                     DILAILTEQQFRVSMPEITAMMRAPDHKNFRECGDQFLRYFLRGLAARQHVKKS"
     gene            complement(2615..3334)
                     /gene="yehT"
                     /locus_tag="JN001_003669"
     CDS             complement(2615..3334)
                     /gene="yehT"
                     /locus_tag="JN001_003669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310963.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator BtsR"
                     /protein_id="HAY9054746.1"
                     /translation="MIKVLIVDDEPLARENLRVFLQEQSDIEIVGECSNAVEGIGAVH
                     KLRPDVLFLDIQMPRISGLEMVGMLDPEHRPYIVFLTAFDEYAIKAFEEHAFDYLLKP
                     IDEARLEKTLARLRQERSKQDVSLLPENQQALKFIPCTGHSRIYLLQMKDVAFVSSRM
                     SGVYVTSHEGKEGFTELTLRTLESRTPLLRCHRQYLVNLAHLQEIRLEDNGQAELILR
                     NGLTVPVSRRYLKSLKEAIGL"
     gene            complement(3331..5016)
                     /gene="btsS"
                     /locus_tag="JN001_003670"
     CDS             complement(3331..5016)
                     /gene="btsS"
                     /locus_tag="JN001_003670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component regulatory system sensor histidine
                     kinase BtsS"
                     /protein_id="HAY9054747.1"
                     /translation="MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKF
                     LCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSM
                     GGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILA
                     IARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAAS
                     TEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISST
                     YTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNR
                     LFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIK
                     AVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQV
                     NIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNA
                     GLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLQLPWRDEA"
     gene            5238..5303
                     /locus_tag="JN001_003671"
                     /pseudo
     CDS             5238..5303
                     /locus_tag="JN001_003671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416631.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family DNA-binding transcriptional
                     regulator"
     gene            5531..5779
                     /locus_tag="JN001_003672"
     CDS             5531..5779
                     /locus_tag="JN001_003672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinI family protein"
                     /protein_id="HAY9054748.1"
                     /translation="MRVEICIAKEKITKMPNGAVDALKEELTRRISKRYDDVEVIVKA
                     TSNDGLSVTRTADKDSAKTFVQETLKDTWESADEWFVH"
     gene            complement(5895..6164)
                     /locus_tag="JN001_003673"
     CDS             complement(5895..6164)
                     /locus_tag="JN001_003673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9054749.1"
                     /translation="MLLQHSDIEIAWYASIQQEPNGWKTVTTQFYIQEFSEHIAPLQD
                     AVDLEIATEEENSLLEAWKKYRVLLNCVDTSTAPDIEWPEEPDTM"
     gene            6221..6889
                     /locus_tag="JN001_003674"
     CDS             6221..6889
                     /locus_tag="JN001_003674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HAY9054750.1"
                     /translation="MVKLMKKNTDDGAKIYTPITLKLYDWWVLGVSNRLAWGCPTKEH
                     LLPHFLEHLGNNHLDIGVGTGFYLTHVPESSLISLMDLNEASLNAASTRAGESKIKHK
                     ISHDVFETYPAALHGQFDSISMFYLLHCLPGNISTKSCVIRNAAQALTDDGTLYGATI
                     LGDGVVHNSFGQKLMRIYNQKGIFSNTKDSEEGLTHILSEHFENVKTKVQGTVVMFSA
                     SGKK"
BASE COUNT         1827 a         1739 c         1637 g         1763 t
ORIGIN      
        1 cgtactggca gtacaggcct ttgtccaggc aaaagcgcag caagcggaat tgactcattt
       61 aatctggcag atgcgcagcg aacacgtcac atcatctgac gatccgtttg ccagcgaaga
      121 aggcaaaacg tgtcgtcaat atgttcaaca actaagccag gcattatggc tgagcggcat
      181 cagccagccg cttattcact acgaggccgc tttcagccgc gcgcagcaag cagcggaacg
      241 ctgcagctgg cgatgggtga gtgaatcgct acggcaactg cgcgccagcg ttgatgcctt
      301 ccacgcccgc gccagccact atcatgccgg agaatgctta cgtcagcttg cggcattaaa
      361 cagtcgatta aactgcgcac aagagatggc ccggcgcgac agtgttggtg aagttcctcc
      421 tgtgccgtgg cgcacggtcg ttggctctgg cattgccgga gaagcaaagc ttgatcatct
      481 gcggctggtg tctttaggta tgcgttgctg gcaggatatt gagcattatg gtttacgcat
      541 ctggtttacc gatcccgaca ccggcagtat tttgcatctt tcgcgtagtt ggccgcgaag
      601 tgaacaggaa aactcaccgg cagctacgcg tcggctgttt agttttcagg ctggcgcact
      661 ggcgggtggg caaattgttt cacaagcagc aaaacgcagt gccgatggcg agctgctgtt
      721 agctacccgc aaccgcttaa gcagcgttgt gccgctgtcg ccagacgcct ggcaaatgtt
      781 gagcgcgccg ttacgccagc cgggcattgt ggctttgcgg gaatatttac gccagcgtcc
      841 ccccgcctgc atacggcctc ttaatcaggt ggataactta tttattctgc cggtcgctga
      901 gtgtatttca ctcggttggg acagcggccg ccagacgctg gatgcgcagg taatcagcgg
      961 cgaaggtgaa gataatctgc tgacgttatc ccttccggca tctgcctgtt ctccttttgc
     1021 cgttgaacgc atggcggcgc ttttgcaaca aacagacgac cccgtgagtc tggtttctgg
     1081 ctttgtcagc tttgtagagg ggcaattgac actggaacca cgggtgatga tgacaaaaac
     1141 ccgtgcctgg gcgctggacg cggaaactgc gcctgtggca ccgctacctt ctgccagcgt
     1201 tttgcctgtg ccgtctaccg ctcatcagtt gctgatgcgc tgccaggcgt tacttattca
     1261 actgctccat aacggctggc gctatcagga acagagcgct attagtcagg cagagttgct
     1321 ggcgaatgac ctcaccgcgg tgggttttta tcggctggca catgtgttgg tacaatttcg
     1381 taatacagaa agcgaggcac gggtagaagc aatgaataac ggtgttttgc tttgcgaaca
     1441 attattcccc atgcttcagc aacaaggatg aaatagtgct ttttactaag agttctactc
     1501 cagttccgga ctgctcacgc cacggtatta ggcatatcct atatagcccc tggtgagagt
     1561 caccagtttc ttgattaaat aaaatggagt tttacatgaa ggctttcaat aagctgtttt
     1621 ccctcgttgt tgcatctgtt ctggttttct ctcttgctgg ctgcggtgac aaagaagaat
     1681 cgaagaaatt cagcgccaat ctgaacggca ctgaaattgc cattacctat gtctacaaag
     1741 gtgacaaggt gcttaagcaa tcttctgaaa ccaaaattca atttgcctcc attagtgcaa
     1801 ccaccaaaga agatgctgcc aagacacttg agccgttaag cgccaaatac aaaaacatcg
     1861 cgggtgttga agaaaaatta acctataccg atacctacgc gcaggaaaac gtgactatcg
     1921 atatggaaaa agtggatttt aaagccctgc agggtatttc aggaatcaac gtttctgctg
     1981 aagatgccaa aaaaggtatc actatggcgc aaatggaact ggtgatgaaa gccgctggtt
     2041 ttaaagaagt gaaataatct gtcggcggcc atgtttcgta tggccgccat acccgtctta
     2101 gcttttcttc acatgctggc gcgctgccag tccacgcaga aaataacgta aaaattgatc
     2161 gccgcattcg cggaagtttt tatgatccgg tgcgcgcatc atcgctgtaa tttccggcat
     2221 cgaaacgcgg aactgctgtt cggtgaggat agccagaatg tcatcggttt tcagcgaaaa
     2281 cgcgatgcgt aattttttca gcacgatgtt gttattaatg cgacgttccg gctccagtgc
     2341 cggagcagac tcatccttgc cgcgtttttc ataaatcagg ccattgagga atgacgacaa
     2401 aacaatgtcc ggacaacgct gaaaaccctc ttcgtcttct ttacgtagcc agacggcgat
     2461 ctgttccgcg gtggcttcga cattacccag cgccagaata cgcaccaggt cattattatt
     2521 ggctttcaaa atgtagcgca cgctgcgcag aatatcgtta cttagcatga ggccttcagg
     2581 tgttgatgag gcaaaaagcc attttagcag tcttttacag gccaatcgcc tcttttaagc
     2641 ttttcagata acggcggctg accggcacgg ttaagccatt acgcaaaatc aactcggcct
     2701 ggccgttatc ttccagacga atctcctgta aatgcgcgag gttaaccaga tactgacgat
     2761 ggcagcgcag tagtggtgta cgactttcca gggtacgtaa tgtcaattcg gtaaagccct
     2821 ctttcccttc gtggctggta acgtagacac cgctcatccg actgctgaca aatgccacat
     2881 ctttcatttg cagcaaataa atccgactat gccccgtaca agggataaat ttcagcgcct
     2941 gttgattttc cggtaacagc gaaacatcct gcttgctgcg ctcctgacgc aatcgcgcca
     3001 gcgttttctc cagtcgcgct tcatcaattg gcttcagcag ataatcaaag gcatgttctt
     3061 caaaggcttt aatagcgtat tcgtcaaacg cagtgagaaa aacaatatac gggcgatgtt
     3121 ccgggtcaag catccccacc atttccagac cactgatgcg cggcatctgg atatcgagaa
     3181 acagcacatc cgggcgcagt ttatgcaccg cgccgatccc ttccacggcg tttgaacact
     3241 ctccaacgat ttcaatatcg ctctgctcct gcaaaaatac acgcaggttc tcccgtgcta
     3301 acggttcatc atcgacaatt aagactttaa tcatgcctcg tccctccatg gtagttgtaa
     3361 cgttattcgg gtgtaactat caggctcaca ggcgacgctt attccatagt catcgccaaa
     3421 ccgttcacgt aaacgcttat ccaccagatt catccccagc ccactggcat tggttaccgg
     3481 ttgatacaaa ccggcattgt cttcgatctc cagcatcaaa tgttgcccct cacgtcgggc
     3541 gctgattgcc actcgccctg tatccagcag ttgtgatgtc ccatgtttaa tggcgttttc
     3601 cactatcggt tgcagggtaa acgcgggcaa ttgctgctgg gataattctt gcggaatagc
     3661 aatgttgacc tgcaaccgcg actggaagcg cgccttttca atttgcagat aagcgttcac
     3721 atgttcaatt tcgtcggcga gagtaacaaa ctccgaaggc cgctttaagt ttttgcggaa
     3781 aaaagtggaa agatactgca ccagctggct ggcctgttcg ctgtcgcggc ggatcaccgc
     3841 tttaatggtg ttaagcgcat taaacaaaaa atgaggattc acctgggcgt gaagcagttt
     3901 gatttctgac tgggtgagca tcgctttttg ccgctcatat tgcccggcaa gaatctgcgc
     3961 cgaaagcagt tgcgcaatcc cctcgcccag cgtgcggttt attgaactga ataaacggtt
     4021 tttggcttca tacaatttga tggtgcccat cacccgctga ttttcaccac gcaacggaat
     4081 taccagcgtc gaccccagtt tgcattgcgg atgcaaagag caacgataag gtacttcgtt
     4141 gccatcagcg tagaccactt caccggtttc aatcgctttt aaggtgtaag tcgaagaaat
     4201 cggtttgccg ggtaaatggt ggtcgtcacc aattccagta aaggccagca atttctctcg
     4261 atcggtaatc gcgactgcac caatatccag ctcctgatac agcacctgtg ccactttcat
     4321 gctgttcact tcgttaaacc cctggcgcaa aatgccttcc gtcgaggcag ccactttcag
     4381 cgcagtggca gaaaaagccg aagtgtattt ttcaaacatc gcgcgtttat cgagcaatat
     4441 acgcataaac agcgccgcgc cgacggtatt ggtgaccatc attggtgcag caatattact
     4501 caccagacgc accgcatctt cataaggtcg ggcgatcgcc aggatgatca acatttgcac
     4561 catttcagcg acgaacgtga cggcaccggc ggtaatgggg ttaaagactt tatcagtacg
     4621 cccgcgacga atcaggatgc tgtgtaccag gccgccgagc aatccttcaa cgatggtcga
     4681 gatcatgcaa cttagcgcgg tcatgccccc catcgaatat cgatgtaacc cgccggtcag
     4741 gccaaccagc ccaccgacga ccggaccgcc gagtaagccg cccattaccg cgcctatcgc
     4801 acgggtattg gcaatagaat cgtcaatgtg caacccaaac caggtgccca tgatgcagaa
     4861 gatggaaaag acgatgtagc agagaaattt atgcggcaga cgaaccgtga cctgcattaa
     4921 cggtatgaat aatggcgttt tactcattaa ccacgcaatg actaaaaaaa cgcacatctg
     4981 ctgaagcagc agcaacacca gattaaaatc gtacataccc gcaaaccaca cttcccttta
     5041 aaacgcgtaa catacattgc ctgcgtttaa ctttctttga actcttgcag aaaaatgaga
     5101 attcgtgagt acgatcactc aaaatcgcct ggcaaaaata aaatcaccct atagatgcac
     5161 aaaaaacggg caaaactacc tggttcgcaa aactgcgtct aaagttaaac cgggacctcg
     5221 cgagcaaggg tgagacgatg gcgctttaca caattggtga agtggcgttg ctttgtgata
     5281 ttaaccctgt cacgttacgc gcgtgacgca acattttaaa aaatcgacga agatcgtcca
     5341 ggagcgccgt ttttcaaggg ttggatagat gattcgttta ccatgtcgac gaacttcgac
     5401 gaatttcgcc gataaaaagt gtcccataca tgccccattg atgccccata aacaatatca
     5461 gaaattgata ctggttatcc atacagataa aaataacacc tgtacataac tacagttaca
     5521 ggagggtgtt atgcgtgttg agatctgtat cgctaaagaa aaaatcacta aaatgccaaa
     5581 cggtgctgtg gatgcgttaa aggaagaatt aacccgacgc atcagtaaac gttatgacga
     5641 tgtagaggtg atcgtaaaag ccaccagcaa cgatggcctt tctgttacac gcaccgcaga
     5701 taaggattct gcaaaaacat ttgttcagga gactctgaaa gatacctggg agtctgctga
     5761 cgagtggttt gttcactaat aaacacgtaa aatcggtaac ggctggaaat cattcaatac
     5821 tcgcactatc gaaagtttac cagccaaccg cagcacgtcc tgcatacgtc gtgtctgcgg
     5881 tttttctttt tcgcttacat tgtgtctggt tcttccggcc actcaatatc aggtgcagtt
     5941 gatgtatcaa cacagttcag caacacccga tacttcttcc aggcttccag caacgagttt
     6001 tcttcctccg ttgcgatctc cagatctaca gcatcctgaa gtggcgcaat atgctcactg
     6061 aattcctgga tgtagaactg tgtggtgacg gtcttccagc cattcggctc ctgctgtatc
     6121 gaagcatacc aggctatttc aatatcgcta tgctgcagca gcatttaacc ccttgtaatt
     6181 catcgccata attgatttaa ttcacaaata aaactataat atggtgaaat taatgaaaaa
     6241 aaacacagat gatggggcta aaatttacac accaattacc ctaaagcttt atgactggtg
     6301 ggttttggga gtatcaaatc ggcttgcatg gggatgtcct acaaaggaac accttcttcc
     6361 acactttctg gaacatttag gtaacaacca tctggatatt ggtgttggaa ctgggtttta
     6421 ccttactcac gtacctgaga gtagtctgat atctttaatg gatttgaacg aagctagcct
     6481 gaacgcggca tctacaaggg ctggggaatc aaaaattaaa cataaaatta gccatgatgt
     6541 ttttgaaact tatcccgcgg cgttacatgg tcaatttgat tccatttcca tgttttacct
     6601 tcttcactgc ctgcctggaa atatatctac aaaaagctgt gtaatacgca atgcggcgca
     6661 ggccttaact gatgatggaa ctctatacgg agccacaatt cttggcgatg gagttgtgca
     6721 caatagcttc ggtcaaaaac tgatgcgcat ttacaatcag aaaggcatct tttcaaacac
     6781 aaaagattcc gaagaaggct taacacatat actctcagag catttcgaga atgttaaaac
     6841 caaggttcaa ggtactgtag taatgttttc tgcttcaggg aaaaaatagc atccaaccgc
     6901 agcacgttct tgcttaagac gtgctacggt ttcctttacg atttggggtt gcgactttac
     6961 ctctat
//
LOCUS       DADMJE010000190         6921 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.193, whole genome shotgun sequence.
ACCESSION   DADMJE010000190 DADMJE010000000
VERSION     DADMJE010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.193"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            598..882
                     /locus_tag="JN001_003675"
     CDS             598..882
                     /locus_tag="JN001_003675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858243.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY9054751.1"
                     /translation="MIYGGFMKSGVQLNLRARESQRILIDAAAEILHKSRTDFILEMA
                     CKAAEDVILDRRVFNFNDRQYEEFIEMLDAPVADDPAIEKLLARKPQWDV"
     gene            870..1355
                     /locus_tag="JN001_003676"
     CDS             870..1355
                     /locus_tag="JN001_003676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY9054752.1"
                     /translation="MGCVTAPEPLSSFHQVAEFVSGEAVLDDWLKQKGLKNQAIGATR
                     TFVVCRKGTQQIVGFYSLATGSVNHTEATGNLRRNMPDPIPVIILARLAVDVSFRGKG
                     LGADLLHDAVRRCYRVAENIGVRAIMVHALTENAKQFYIHHGFKPSKTQVQTLFLKLP
                     Q"
     gene            1389..2567
                     /gene="ltrA"
                     /locus_tag="JN001_003677"
     CDS             1389..2567
                     /gene="ltrA"
                     /locus_tag="JN001_003677"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005017045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY9054753.1"
                     /translation="MCVATREPPGCDGQTLKMFDQQRDGNLYKIWNRLCSGTWFPPPV
                     LEKRIPKSNGKERILGIPTVSDRIAQGAIKLFMEEKLDPIFHADSYGYRPGKSAHDAL
                     KQCAIRCWRYSWILEVDISAFFDHVKHDLVLKALEHHGMPKWVILYCRRWMEAPMQSC
                     ENGELITRTRGTPQGGVISPLLANLFLHYAFDLWMEREYRGVPFERYADDIVVHCSRM
                     SDATRLKNRLSERFSEVGLVLNAGKTNIAYIDTFKRRNVATSFTFLGYDFKVRTLKNF
                     KGERYRKCMPGASNAAMRKITETIKKWRIHRSTAESLLDFARRYNTIVRGWIEYYGKF
                     WSRNFNYRLWSAMQSRLLKWMQSKYRLSNRKAQRKLTLVRKEYPKLFVHWYLLRASNE
                     "
     gene            2650..2804
                     /locus_tag="JN001_003678"
                     /pseudo
     CDS             2650..2804
                     /locus_tag="JN001_003678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(2858..3340)
                     /locus_tag="JN001_003679"
                     /pseudo
     CDS             complement(2858..3340)
                     /locus_tag="JN001_003679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016154415.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
     gene            complement(3596..4576)
                     /locus_tag="JN001_003680"
     CDS             complement(3596..4576)
                     /locus_tag="JN001_003680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HAY9054754.1"
                     /translation="MENRKHRPTIGRTLNTNILNNTEEISAPVHVFTLNTGRKAKFTE
                     IKVDHDKVDTQTFVVEEVNGREQTALTPDSLKDITRTIRLQQFYPCIGIRTGDLIEIL
                     DGSRRRAAALLCKVGLRVLVTDDELTVSEAQHLAKDLQTSLEHNIREIGLRLVRLKEA
                     GMNQKQIAEREGLSAAKVTRALQAASVPKDFVSLFPVQSELTYADYRQLAELSERLRL
                     GDISIDEVVKNISPSIELITADDNLSEDEVKNSIMRLITKEMSSLLDSGVKDKAVVTL
                     LWKFDSKDKFARKRVKGRTFSYEFGRLPLEVQDKLDRMIALVLKDNLNSL"
     gene            complement(4576..5775)
                     /locus_tag="JN001_003681"
     CDS             complement(4576..5775)
                     /locus_tag="JN001_003681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HAY9054755.1"
                     /translation="MTSFEQLSKVAQRADKMLLALTKQIQEQKQEFQADVFYQVYSKS
                     AVAKLPKLTRASVDGAVGEMEAQGYQFEKRPAGTATKYALTIQNIIDIYAHRGIPKYR
                     DRYSEAYSIFIGSLKGGVSKTVSSVSVAHALRAHPHLLSEDLRILLLDLDPQSSATMF
                     LNYLHAVGLVDTTAPQAMLQNVSREELLEDFIVPSVIPGVYVMPASIDDAFIASNWDT
                     LCEEHLLGQNKHAILRENIIDKLKHDFDFILIDTGPHLDAFLKNAIAAADIMFTPVPP
                     AQVDFHSTLKYLARLPELVQIIEQDGCSCRLQANIGFMSKLANKSDHKYCHSLTKEIF
                     GGDMLDVSMPRLDGFERSGESFDTVISANPVTYVGSGEALKNARMAAEDFAKAVFDRI
                     EFIRANY"
     gene            complement(6097..6435)
                     /locus_tag="JN001_003682"
                     /pseudo
     CDS             complement(6097..6435)
                     /locus_tag="JN001_003682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(6502..>6921)
                     /locus_tag="JN001_003683"
     CDS             complement(6502..>6921)
                     /locus_tag="JN001_003683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY9054756.1"
                     /translation="AMGYEAVRAGIQVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMA
                     PRLLIIDEIGYLPFSQKEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTS
                     AMLGRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE"
BASE COUNT         1861 a         1573 c         1650 g         1837 t
ORIGIN      
        1 cggcatccgg catataggca gcatgaacgc aacacaggct ctcgtacgga acgtgggaac
       61 ctgtcgtctc gatgctaagg gagcggcgcg gagcagaggc actgcaagcg cctgagtacc
      121 gatgcgagac acaggggcag atggcttcgt agtagtgagg aagtgcctgt aatgggcatg
      181 gagcgaaggg ggtcagtcga ggcgtttgag gttaccaatc gaagctatac ccggtaatgg
      241 cgcaggttga cctgcacttg gccaagtgga ttgcccgcaa acacaagcga gcgcgaggta
      301 gtctggtgcg tgcattcgag tggttactgc gaattcgtca cgactgcccg acgctgtttg
      361 cacactggtg cttagcttac gatacttgaa tggttcaaca acaagagccg tatgacgcga
      421 gagtgtcacg tacggttccg tgggagcgta ggggggcggt gcccctgcgc cacccgatat
      481 cccctttgag tgcggttacg tccacagagg taaatgccgc tgacgcggca tctgtaatct
      541 gttactttgt gtacatcatt tgctatatat tgtcaatatg ctattgttgt aaagcaaatg
      601 atatacggag gctttatgaa atcaggtgtt cagctcaatc tcagagcaag agaatcacag
      661 cggatactca ttgatgctgc tgcagaaatt cttcataagt cgcgtacaga tttcattctg
      721 gaaatggcct gtaaagctgc tgaagatgtt attctcgacc ggcgggtgtt taattttaat
      781 gacaggcaat atgaagagtt cattgaaatg cttgatgctc cggttgcaga tgatcctgcc
      841 atcgaaaaat tgctggcaag gaaacctcaa tgggatgtgt aactgcacca gaacctttat
      901 cctcatttca tcaggtcgct gaatttgtca gcggtgaagc tgtacttgat gactggttaa
      961 agcagaaggg gctaaaaaat caggcaatcg gagccacccg gacttttgtt gtatgcagaa
     1021 aaggtacgca acaaatagtc ggtttttact cactggccac tggtagtgtc aatcatacag
     1081 aagctacagg taaccttcgg cgcaatatgc cagaccccat tcctgtaatt atacttgcac
     1141 gcctggctgt agatgtgtca tttcgaggaa aagggcttgg cgcggattta cttcatgatg
     1201 cagttcgtcg ttgttacagg gttgccgaaa atatcggtgt gcgtgcaatt atggttcatg
     1261 cgcttacgga aaacgcaaaa cagttttata ttcatcatgg ttttaagcca tcaaaaactc
     1321 aggtgcaaac attgtttctt aaactccctc aatagggagt aatgcactgg tctgggcatc
     1381 atatctggat gtgcgtcgca acaagggagc cccccggatg cgacgggcag actttgaaaa
     1441 tgttcgacca gcaacgtgat ggcaatctat acaagatctg gaaccggcta tgttcgggaa
     1501 catggtttcc gccaccagtg ctggaaaaac ggatcccgaa gtcgaatggc aaggaacgca
     1561 ttctggggat cccaacagta tccgatcgaa ttgctcaggg agcgataaaa cttttcatgg
     1621 aagaaaagct tgacccgatt ttccatgctg attcatatgg ttaccgacca ggcaaatcag
     1681 ctcatgacgc tctgaaacaa tgtgccatcc ggtgctggcg ttatagctgg atactggaag
     1741 tggacatcag tgcgtttttc gaccatgtga aacatgatct ggtgctcaaa gctctggaac
     1801 accacgggat gcctaaatgg gtcatcctgt actgtcgacg ctggatggaa gcgccaatgc
     1861 agagttgtga aaatggagaa ttaataaccc gaacacgagg cactccgcag ggcggggtca
     1921 ttagtccgct acttgctaac ttgttccttc actatgcatt tgatttgtgg atggaaagag
     1981 aatatcgggg ggtaccgttt gagaggtacg ctgacgatat tgtagtacat tgttcacgaa
     2041 tgagtgatgc aacaaggcta aagaacaggt tatcggagcg cttctcggaa gtcgggctgg
     2101 tcctgaatgc agggaaaacg aatatcgcct acattgacac gtttaaaagg agaaacgtcg
     2161 caacgagttt cacctttctc ggatatgact tcaaagtgcg tacgctgaag aatttcaaag
     2221 gcgaacggta ccgaaaatgc atgccgggtg cgtcaaatgc agcaatgcgc aaaataacag
     2281 aaacaatcaa gaagtggcgt atacatcgct caacagctga gagtttgctg gattttgcga
     2341 ggcgctacaa tacgatagtg agaggctgga tcgagtacta cggaaagttc tggtccagaa
     2401 atttcaacta tcgactgtgg agtgcaatgc agtcacgtct gctcaagtgg atgcagtcta
     2461 aatacagact ttcgaaccgg aaggctcagc gaaagctgac gctggtaagg aaggagtatc
     2521 cgaagctatt tgttcactgg tatttactac gtgcatcaaa tgagtgatca agagccgtat
     2581 gacgcgagag tgtcacgtac ggttccgtga gcagccgggg agtgaaattc tctccggctg
     2641 actcgactcg cgggttccga cagcgatgac gaacatgcgg cggtgttgta ctcgctgatc
     2701 ggcacatgcc gtctgaacaa tgtggaacca gaaaatggct gcgttacgtc attgagcata
     2761 tccaggactg gccggcaaac cgggtacgtg atctgttgcc ctagaaagtt gatctgagct
     2821 ctcagtaaat atcaatacgg ttctgacgag ccgcttactt ttggcgtaat tctgctgcgc
     2881 ctttactgaa cacaatgccg tattcagcaa gaagtccacg aatgtgattt atcagttgtg
     2941 tcctttccat tgaaaccaac cgacgcatat tcaaaaaagt ttggacgtcc tgttgctcca
     3001 gagtttttat tggtacgggt cgtatagttc catgttggca ggcctcagct attgcctgtg
     3061 cgtcgttata atcatttttc tggcaccgct gataagcttt aacatgttgt gccggaagca
     3121 atattacatc atggtcgagt ttcctgattt cccgggccca gtaatgagat gccccgccag
     3181 cctccatcgc aacagtcatt ttaggctgtt gcaccagcca gttaagcagt tgattgcgag
     3241 aaagtttggt ctttcctgcg ggtttgccat gagcattgat actgaaaaga taaaagttcg
     3301 ttttagccag atcaatgccg gtgattttct gttcagacat ggtatcccgc ttacttttgt
     3361 ggttaaagtt tatccatcat ggcgcaattg aaggctgccg tgaaagaggg ggaagactat
     3421 ctcatcggtt actgttaaac ggctaagaga aactatcttt ttcaagcaaa gaagatacgg
     3481 tgaaacaggc gatttcaccg tgaaatactg ttcaaaaaaa acgccaataa aagcaaaatt
     3541 tcttttaaaa cagccaatta aaaactggtg agttgctggc gaaaaacttg aattttcaca
     3601 gcgaattcag attatctttt agtacaagag caatcatacg atctaactta tcctgaactt
     3661 ccaacggtaa tctgccgaat tcatatgaga acgtacgtcc ctttactcgt tttcgagcaa
     3721 atttatcttt actatcaaat ttccataaca aagttacaac cgctttatcc tttactcctg
     3781 aatcaagcaa tgaagacatt tccttggtta taagccgcat aatactgttt ttaacctcgt
     3841 cttcagaaag attgtcatca gcagtaataa gctcaatact cggcgagata ttcttcacaa
     3901 cttcatcaat agatatatca cccagcctca gtcgttcact taattcagcc agttgcctgt
     3961 aatcggcgta tgtcagctca gactgaacag gaaaaagaga cacaaaatct ttaggtacgg
     4021 acgctgcttg gagggcacga gtcaccttag ctgccgacaa tccctctctt tccgcaattt
     4081 gcttctggtt cataccggcc tctttgagac gtactaaacg caacccaatt tcacgaatat
     4141 tatgttcaag tgacgtctgc aaatctttcg ccagatgctg agcttcagaa acagtaagct
     4201 catcatccgt tacaagtaca cgtaatccaa ccttgcatag caaagctgct gcccgacgac
     4261 gggaaccatc caaaatctca ataagatcgc cagtccgaat cccaatacat ggatagaatt
     4321 gttgtaaacg tatagttctg gtgatgtctt ttagtgagtc cggcgtcagg gctgtctgtt
     4381 cgcggccatt cacctcttca accacaaaag tttgagtgtc cactttgtca tgatcaacct
     4441 tgatctcagt aaattttgcc tttcggccag tattgagggt aaatacatga actggagccg
     4501 atatttcttc agtattattc aggatatttg tattcagcgt acggccaata gtcggtcggt
     4561 gctttctgtt ttccatcagt agttggccct tataaattca atacgatcaa aaactgcttt
     4621 agcgaaatct tctgctgcca tacgtgcatt tttcaaagct tcaccactgc caacataagt
     4681 aacaggattc gcagatatca cggtatcaaa cgactcgccg cttctctcaa aaccatcaag
     4741 acgtggcatt gaaacatcaa gcatgtcacc accgaaaatc tcttttgtca ggctatggca
     4801 gtatttatga tctgacttat tcgccagttt cgacatgaag ccaatatttg cctgcaaacg
     4861 gcatgaacat ccatcctgtt caataatctg tacaagttca ggtaaacgag ccaaatattt
     4921 aagcgtggaa tggaaatcaa cttgtgctgg cggcaccggt gtaaacatga tatctgcggc
     4981 agcaatggca tttttcaaaa atgcgtccag atgcgggcct gtatcaataa ggatgaagtc
     5041 gaaatcatgc ttcagcttat caataatatt ctcacgcaat atcgcgtgtt tgttttgtcc
     5101 taatagatgc tcctcgcaca gagtatccca gtttgatgca ataaaggcgt cgtcaataga
     5161 agccggcata acataaacgc cagggataac tgacggaacg ataaaatctt ccagtaattc
     5221 ctcacgactc acgttctgca acatagcctg cggtgcggtt gtatcaacca gccccaccgc
     5281 atgcaagtag ttcagaaaca tagtggctga tgactgggga tctaaatcaa ggagcagaat
     5341 acgtaaatct tctgacagca ggtgaggatg agcacgcagg gcgtgagcta cggaaacact
     5401 actcacggtt ttagacacac cgccttttag actaccgatg aatatggaat atgcctcact
     5461 ataacgatcg cgatatttag gaatgccacg atgtgcatag atatcgataa tgttctggat
     5521 ggttaatgca tattttgtcg cggttcctgc tgggcgtttt tcaaactgat agccctgagc
     5581 ctccatctca ccgactgcac catccacgct tgcgcgcgtt aattttggaa gcttagctac
     5641 agcagacttt gaatagactt gataaaaaac atcagcctga aactcctgct tttgctcctg
     5701 aatctgtttt gttagggcga gcaacatttt atctgcacgc tgcgcaacct tacttaactg
     5761 ctcaaaacta gtcattcccc ctccgtgcta tgtaggattt taacttatta caaaaaaaac
     5821 tgcattagca gggtaatgca tgcaagtgca tattgtacat gcttatatta aaaatgcgcg
     5881 cattgctgat ttattaatca tcggaatgaa tattactgta agatagtatg cctttccggg
     5941 agaaagacgc tgatttcccc cgaataatcc agttcaccac cacactccgg acaacagctt
     6001 tcttcaggct ccagatggtg tatttcgcgg gaaacatgtt ccggtaacgg acggcgatga
     6061 cgtgactgtc gcaacaggcg ggggtagtgc ttccaatcag tagaacatgt gcttttcaat
     6121 gaaggagccg atgacttttt cgtggatttc cacggaacgc gagaagcaga ttgttttacg
     6181 tgccagccgc ttgatgcggg tgcggagggt ccggttgtta cgttcaatac gttgcgtgaa
     6241 gattttgccg gtcaggtgtt tctccttcgg cacttctctg gcgtagctgc cccagtcatc
     6301 gctggtcacc atgccgatac agaacggagt caacagggct aacagttccc gacaggtctc
     6361 atcattccgt ggcccgaaag tgtaagccaa cacaccgcca gttttagtgt tgtacgcata
     6421 ccagagccag tgttgtgtca acgacggatg aaaagtgatc cacttatatc tccaccaacg
     6481 gcccaatatt gatccaccgt tttactcagg attagcttct gctataaccc cggcctttcg
     6541 tttctgtctg agtcgatagc tttctccttt gatttgaacg acatgtgagt ggtgtaagat
     6601 acggcccagc atcgctgagg tcagtgctgc atcaccggcg aacgtttgat cccactgccc
     6661 gaacggtaga ttggatgtca ggatcattgc gctcttttca taacgtttag cgatgacctg
     6721 gaagaacagt tttgcttctt tctgactgaa cggcagatag cctatttcat caatgatgag
     6781 caggcggggg gccattactc cacgctgaag cgtcgtttta taacggccct gacgttgtgc
     6841 cgtagataac tgaagtaaca gatctgctgc tgttgtgaag cgaacttgga tacctgcacg
     6901 gactgcttca tagcccatcg c
//
LOCUS       DADMJE010000191         6861 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.194, whole genome shotgun sequence.
ACCESSION   DADMJE010000191 DADMJE010000000
VERSION     DADMJE010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6861)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6861)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6861
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.194"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..297
                     /locus_tag="JN001_003684"
     CDS             <1..297
                     /locus_tag="JN001_003684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313164.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9054757.1"
                     /translation="LPYLFLALAFPFFKARQDLDRPFVIFKTRMSAMIATVVVVLVVT
                     FANVFTIIPPVVEAGDWDSTLWMIGGPVFFSLLAMAIYQNYCSRMANKPELALD"
     gene            complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JN001_003685"
     CDS             complement(448..3771)
                     /gene="mscM"
                     /locus_tag="JN001_003685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="miniconductance mechanosensitive channel MscM"
                     /protein_id="HAY9054758.1"
                     /translation="MRLIITFLMAWCLSWGAYAATAPDSKQITQELEQAKAAKPAQPE
                     VVEALQSALNALEERKGSLERIKQYQQVIDNYPKLSATLRAQLNNMRDEPRSVSPGMS
                     TDALNQEILQVSSQLLDKSRQAQQEQERTREIADSLNQLPQQQTDARRQLNEIERRLG
                     TLTGNTPLNQAQNFALQSDSARLKALVDELELAQLSANNRQELARLRSELAEKESQQL
                     DAYLQALRNQLNSQRQLEAERALESTELLAENSADLPKDIVAQFKINRELSAALNQQA
                     QRMDLVASQQRQAASQTLQVRQALNTLREQSQWLGSSNLLGEALRAQVARLPEMPKPQ
                     QLDTEMAQLRVQRLRYEDLLNKQPLLRQIHQADGQPLTAEQNRILEAQLRTQRELLNS
                     LLQGGDTLLLELTKLKVSNGQLEDALKEVNEATHRYLFWTSDVRPMTIAWPLEIAQDL
                     RRLISLDTFSQLGKASVMMLTSKETILPLFGALILVGCSIYSRRYFTRFLERSAAKVG
                     KVTQDHFWLTLRTLFWSILVASPLPVLWMTLGYGLREAWPYPLAVAIGDGVTATVPLL
                     WVVMICATFARPNGLFIAHFGWPRERVSRGMRYYLMSIGLIVPLIMALMMFDNLDDRE
                     FSGSLGRLCFILICGALAVVTLSLKKAGIPLYLNKEGSGDNITNHMLWNMMIGAPLVA
                     ILASAVGYLATAQALLARLETSVAIWFLLLVVYHVIRRWMLIQRRRLAFDRAKHRRAE
                     MLAQRARGEEEAHHHSSPEGAIEVDESEVDLDAISAQSLRLVRSILMLIALLSVIVLW
                     SEIHSAFGFLENISLWDVTSTVQGVESLEPITLGAVLIAILVFIITTQLVRNLPALLE
                     LAILQHLDLTPGTGYAITTITKYLLMLIGGLVGFSMIGIEWSKLQWLVAALGVGLGFG
                     LQEIFANFISGLIILFEKPIRIGDTVTIRDLTGSVTKINTRATTISDWDRKEIIVPNK
                     AFITEQFINWSLSDSVTRVVLTIPAPADANSEEVTEILLTAARRCSLVIDNPAPEVFL
                     VDLQQGIQIFELRIYAAEMGHRMPLRHEIHQLILAGFHAHGIDMPFPPFQMRLESLNG
                     KQTGRTLTSAGKGRQAGSL"
     gene            complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JN001_003686"
     CDS             complement(3793..4761)
                     /gene="psd"
                     /locus_tag="JN001_003686"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313166.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HAY9054759.1"
                     /translation="MLNSFKLSLQYILPKLWLTRLAGWGASKRAGWLTKLVIDLFVKY
                     YKVDMKEAQKPDTASYRTFNEFFVRPLRDEVRPIDTDPNVLVMPADGVISQLGKIEED
                     KILQAKGHNYSLEALLAGNYLMADLFRNGTFVTTYLSPRDYHRVHMPCNGILREMIYV
                     PGDLFSVNHLTAQNVPNLFARNERVICLFDTEFGPMAQILVGATIVGSIETVWAGTIT
                     PPREGIIKRWTWPAGENDGSVALLKGQEMGRFKLGSTVINLFAPGKVNLVEQLESLSV
                     TKIGQPLAVSTETFVTPDAEPAPLPAEEIEAEHDASPLVDDKKDQV"
     gene            complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JN001_003687"
     CDS             complement(4858..5910)
                     /gene="rsgA"
                     /locus_tag="JN001_003687"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313167.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="small ribosomal subunit biogenesis GTPase RsgA"
                     /protein_id="HAY9054760.1"
                     /translation="MSKNKLSKGQQRRVNANHQRRLKTSKEKPDYDDNLFGEPDEGIV
                     ISRFGMHADVESADGDVHRCNIRRTIRSLVTGDRVVWRPGKPAAEGVNVKGIVEAVHE
                     RTSVLTRPDFYDGVKPIAANIDQIVIVSAILPELSLNIIDRYLVACETLQIEPIIVLN
                     KIDLLDDEGMAFVNEQMDIYRNIGYRVLMVSSHTQDGLKPLEEALTGRISIFAGQSGV
                     GKSSLLNELLGLQKEILTNDVSDNSGLGQHTTTAARLYHFPHGGDVIDSPGVREFGLW
                     HLEPEQITQGFVEFHDYLGLCKYRDCKHDTDPGCAIREAVEEGKIAETRFENYHRILE
                     SMAQVKTRKNFSDTDD"
     gene            6005..6550
                     /gene="orn"
                     /locus_tag="JN001_003688"
     CDS             6005..6550
                     /gene="orn"
                     /locus_tag="JN001_003688"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418586.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoribonuclease"
                     /protein_id="HAY9054761.1"
                     /translation="MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGP
                     TIAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKS
                     PICGNSIGQDRRFLFKYMPELEAYFHYRYLDVSTLKELARRWKPEILDSFTKQGTHQA
                     MDDIRESVAELAYYREHFIKL"
     gene            6761..6836
                     /locus_tag="JN001_003689"
     tRNA            6761..6836
                     /locus_tag="JN001_003689"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:6794..6796,aa:Gly,seq:gcc)
BASE COUNT         1587 a         1843 c         1842 g         1589 t
ORIGIN      
        1 cttccttacc tgttcctcgc gctggctttc ccattcttta aagcacgtca ggatctcgac
       61 agaccatttg tgattttcaa aacgcgtatg tcggcaatga ttgcgacggt ggttgtcgta
      121 ctggtggtga catttgcgaa cgtcttcacc attattccgc ctgtggttga agccggagac
      181 tgggacagca cattgtggat gattggcggc cctgtcttct tctcgctgtt agcgatggcg
      241 atttaccaga actattgcag tcgcatggcg aataaacctg agttagctct cgactgatca
      301 tatgaaatcc tgcaactcat cgtctctccg gcgatgagtt gtcaggaagt aatgcgtatg
      361 gatgatactc tccagggccg gtgataactg aagatgatgt taagctgcta aatgagccac
      421 gttgacatca tttggcagct tcatgcatta caaacttccc gcctgacgac ctttgcccgc
      481 agacgtcagc gttctccccg tttgtttacc gttgaggctt tccagacgca tctggaaggg
      541 cgggaatggc atatcgatac cgtgggcatg gaagccagcc agaatcagct ggtggatctc
      601 atggcgtagc ggcatacggt gacccatctc agcggcataa atacgcagct cgaaaatctg
      661 aatcccttgt tgcagatcca ccaggaagac ttccggtgcc gggttgtcga tcaccagcga
      721 gcagcgacgc gctgcggtga gcaggatttc cgtcacttct tcactgttgg catcagcagg
      781 ggccggaatc gtcaacacta cgcgcgtaac cgagtcagag agcgaccagt tgataaactg
      841 ctcggtaata aacgccttgt tcggcacgat tatctcttta cggtcccagt cgctgatggt
      901 ggtggcgcgg gtgttaattt tcgtcacgct accggtgaga tcgcgaattg tcaccgtatc
      961 gccaatgcga atcggttttt cgaacaggat aatcagacca gagataaagt tggcgaaaat
     1021 ttcctgcaaa ccaaaaccga gaccaacacc gagcgcggcg accagccact gcaatttcga
     1081 ccattcaata ccaatcatcg agaagccgac cagcccgcca atcagcatca gcagatattt
     1141 ggtgatggtg gtgatggcgt agcctgtacc cggcgttaaa tccaggtgct gcaaaatcgc
     1201 cagttccagc agcgcgggca ggttgcgcac cagctgcgtg gtgatgataa acaccagaat
     1261 ggcaatcagc accgcaccga gggtaattgg ctccagactt tctacgcctt gtaccgtgga
     1321 ggtgacatcc cacagcgaaa tattttcgag gaagccgaaa gcggaatgga tttctgacca
     1381 cagcacaatg acagaaagca gggcgatcaa catcaaaatt gagcgcacca gccgcaagga
     1441 ttgcgcactg atggcatcga gatcgacttc gctttcatcg acttcaattg ctccttccgg
     1501 gctactgtga tgatgcgctt cctcttcgcc acgcgcacgt tgcgctaaca tctctgcccg
     1561 gcgatgcttc gcccggtcaa acgccagcct gcggcgctgg atcagcatcc agcggcggat
     1621 aacgtgataa accaccagta gcaggaacca gatggcaacc gaggtttcaa gcctcgctaa
     1681 cagcgcctgt gccgttgcca gataacccac agccgacgcc agaatggcaa ccaacggcgc
     1741 gccaatcatc atgttccaca gcatatggtt ggtaatgttg tcgccgctgc cctctttgtt
     1801 gagatacagt gggatcccgg cctttttcag gctgagggtg accaccgcca gcgcaccgca
     1861 aatgaggata aagcaaagcc gtcccagcga accggagaat tcacggtcgt cgaggttatc
     1921 gaacatcatc agcgccataa tcagcggcac aataagcccg atgctcatca ggtagtagcg
     1981 catcccacgg gaaacacgtt cgcgcggcca gccaaaatga gcgataaaca agccgttcgg
     2041 gcgggcaaag gtggcgcaaa tcatcactac ccacagcagc ggcacggtag ccgttacacc
     2101 atcgccaatc gcgaccgcca gcggataagg ccacgcctcg cgcaagccgt aacccagcgt
     2161 catccacagc accggtaacg gtgacgcgac gagaatcgac cagaaaagag tgcgcaacgt
     2221 cagccagaag tgatcctgag tcactttgcc aactttcgcc gccgaacgtt caagaaaacg
     2281 ggtgaaatag cggcgcgagt aaatactgca accgaccaga atcaacgcgc caaacagcgg
     2341 caaaattgtc tctttgctgg tcagcatcat cacactggct ttgcccaact gactgaaggt
     2401 gtccagcgaa atgagacgac gcagatcctg ggcgatttcc agcggccagg cgatggtcat
     2461 cgggcgcacg tcagaggtcc agaacagata gcggtgcgtt gcttcgttca cctctttcag
     2521 cgcatcctcc agttgcccgt tggagacttt cagcttggtc agttccaata gtagcgtgtc
     2581 gccaccctgc aacaatgagt tcagcaactc acgctgagtg cgcagttgtg cttccagaat
     2641 acggttttgc tcggcggtca gcggctgacc gtcggcctga tggatttgcc gtagcagcgg
     2701 ctgtttatta agcagatcct cataacgtaa ccgttgcaca cgcaactgcg ccatttcggt
     2761 atcaagctgt tgtggttttg gcatttctgg cagccgtgcc acctgcgccc gcagcgcttc
     2821 gccgagcaga ttggacgatc ccagccattg cgactgttca cgcagcgtat tcaacgcctg
     2881 ccggacctgt aacgtctggc tggcagcctg acgctgttgc gaggcaacga gatccatccg
     2941 ctgcgcctgt tgattcaaag ccgccgatag ttcgcggtta attttgaatt gcgcgacgat
     3001 atctttcggc aaatcggcgc tgttttctgc cagcaattcg gtactttcca gcgcccgctc
     3061 cgcctcaagc tgacgttggc tgtttaattg attacgcaag gcctgcaaat acgcatccag
     3121 ttgctggctc tctttttccg ccagctctga gcgtaagcgc gctaattcct ggcggttatt
     3181 ggcagacagc tgcgccagct ccagttcatc aacgagcgcc ttaagacgtg cagagtcaga
     3241 ctgcaacgcg aaattttgtg cctgattgag cggagtattg ccggtaagcg ttcccaggcg
     3301 gcgctcgatc tcatttaact gacggcgggc gtcggtttgc tgttgcggca gttgattcag
     3361 cgaatcggca atctcgcggg tgcgctcctg ctcttgctgg gcctgacggc ttttatccag
     3421 caactggctg ctgacctgga gaatttcctg attcagcgcg tcggtagaca ttcccggcga
     3481 cacgctgcgc ggctcgtcac gcatgttgtt taattgtgcg cgcagagtag cggagagttt
     3541 cggataatta tcgataactt gctgatattg tttgatgcgc tcaagggaac cttttcgttc
     3601 ctcaagcgca tttaaggcag actggagcgc ctctacgact tccggctgtg cgggtttcgc
     3661 cgcttttgcc tgctccagtt cctgagtgat ttgtttgcta tcgggggccg tcgcggcgta
     3721 cgccccccaa ctgaggcacc aggccatcag aaaagtgata atcaggcgca cgtcagcgtt
     3781 tcctttgatg gattagacct ggtctttttt atcgtcaacc aatgggctgg cgtcgtgttc
     3841 tgcttcgatc tcttcagcag gaagtggggc gggttcagcg tctggcgtaa caaaggtttc
     3901 ggtagatact gccagcggct ggccaatttt cgtgacagac aggctttcca gttgctcaac
     3961 cagattcact ttacccggtg caaacaggtt gataacggtg gaaccgagtt taaagcgacc
     4021 catttcctgg cctttcagca gtgccacaga accgtcgttt tccccggcag gccaggtcca
     4081 gcgcttgatg ataccttcgc gcggcggcgt aatggtgccc gcccagaccg tctcaatgct
     4141 gccaacaatc gtcgctccga ccagaatctg cgccattggg ccaaattcgg tatcgaaaag
     4201 gcaaatcacg cgttcgttac gggcaaacag attcggcacg ttctgagcgg tgagatggtt
     4261 aacggagaag agatcgcccg gcacgtagat catctcacgc agaataccgt tgcacggcat
     4321 gtgtacgcga tggtagtcac gcggggagag gtaagtggtc acaaacgtac cgttgcggaa
     4381 caggtccgcc atcagatagt tgcctgccag cagggcttcg aggctgtagt tgtggccttt
     4441 ggcttgcagg attttatctt cttcgatttt acccaactgg ctgataacgc catcggcagg
     4501 catgaccagt acattcggat cggtatcgat tgggcgtact tcgtcacgca gcggacggac
     4561 aaagaattcg ttaaaggtgc ggtagctggc ggtgtccggc ttttgcgcct ctttcatgtc
     4621 gaccttgtag tatttaacga acagatcgat aaccagtttt gtcagccatc ctgcccgctt
     4681 gcttgcgccc caacccgcca ggcgagtaag ccatagtttc ggcagaatgt actgtagcga
     4741 aagtttaaat gaatttaaca aggtagcctc caggccattg ttttgtcgtt cctgatccgg
     4801 ccaacatgcc ggatcctgaa aaaaagggga cgattctaac gacggttagc ttaattgtca
     4861 gtcatccgta tcagaaaagt ttttacgcgt ttttacctgc gccatgcttt ccagaatacg
     4921 gtgatagttt tcgaaacggg tttccgcgat tttcccttcc tcaaccgctt cccggatagc
     4981 gcagcccgga tcggtatcgt gtttgcaatc gcgatattta cacagaccta aatagtcatg
     5041 gaattcgaca aagccctgag tgatttgttc cggctccagg tgccagaggc cgaactcacg
     5101 cacaccaggg gaatcaatca catcaccgcc gtgcgggaag tgatacagcc gagcggcggt
     5161 cgtggtgtgc tgaccgagcc ccgagttgtc agagacatcg ttggtcagga tctctttttg
     5221 cagccccagc aactcattca gcaggctgga tttgccgacg ccagactgcc cggcaaaaat
     5281 gctgatgcgc ccggtcaacg cctcttccag cggttttagc ccatcctgag tatggctgga
     5341 aaccatcaat acgcgataac cgatattgcg gtagatatcc atctgctcgt tgacgaacgc
     5401 catgccttcg tcgtccagca ggtctatctt gttgagcaca ataatcggct caatctgcaa
     5461 ggtttcgcag gccaccaggt aacggtcgat aatattgagt gacagctccg gcaaaatggc
     5521 ggagacaatg acaatctggt cgatgttggc ggcaataggt tttacgccgt cgtagaaatc
     5581 cggacgcgtc aacaccgagg tacgctcatg caccgcttcc acgatccctt tgacatttac
     5641 gccttccgcc gccggtttac ccggacgcca gactacacgg tcgccggtca ccagcgaacg
     5701 gatggtacgg cgaatattgc agcggtgaac gtcgccatcg gcggattcca catcagcgtg
     5761 cataccaaag cggctgatga cgataccttc atcaggctcg ccaaacagat tgtcgtcgta
     5821 gtcgggcttc tccttagacg ttttaagacg acgctggtga ttggcgttca cgcggcgctg
     5881 ctggcctttg gagagtttat ttttactcaa tcgtacagac tcctggtcgc ccctgatggg
     5941 caaaacatct atgatacacg caattgtgga tcaatatagt cactgtgaat gggtggaaaa
     6001 tagcatgagt gccaatgaaa acaacctgat ttggatcgat cttgagatga ctggtctgga
     6061 tcccgagcgc gatcgcatta ttgagattgc cacgctggtg accgatgcca acctgaatat
     6121 tctggcagaa gggccgacca ttgcagtaca tcagtccgat gaacagctgg cgctgatgga
     6181 tgactggaac gtgcgcaccc ataccgccag cgggctggta gagcgcgtga aagcgagcac
     6241 gatgggcgat cgggaagctg aactggcaac gctcgaattc ttaaaacagt gggtgcctgc
     6301 gggaaaatcg ccgatttgcg gtaacagcat cggacaggac cgtcgtttcc tgtttaaata
     6361 catgccggag ctggaagcct acttccacta ccgttatctc gatgtcagca ccctgaaaga
     6421 gctggcgcgc cgctggaagc cggaaattct ggatagtttt accaagcagg ggacgcatca
     6481 ggcgatggat gatatccgtg aatcggtggc ggagctggct tactaccgcg agcattttat
     6541 caagctgtaa aatttttcct ggtcacgtaa gcgccggaat ccacttgcgg cggcgtgatt
     6601 ttgacgctaa attgaacgtc ttgctgataa tttcagcact tgagataaaa acgcaaaaaa
     6661 aacttttttg gggggttgca gagggaaaga tttctcgtat aatacgcctc ccgtaacgac
     6721 gcagaaatgc gaaaattacg aaagcaaaat taagtagtac gcgggaatag ctcagttggt
     6781 agagcacgac cttgccaagg tcggggtcgc gagttcgagt ctcgtttccc gctccaaaat
     6841 ttgaaaagtg ctgcaaagca c
//
LOCUS       DADMJE010000192         6800 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.195, whole genome shotgun sequence.
ACCESSION   DADMJE010000192 DADMJE010000000
VERSION     DADMJE010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6800)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6800)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6800
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.195"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            186..2102
                     /gene="dnaK"
                     /locus_tag="JN001_003690"
     CDS             186..2102
                     /gene="dnaK"
                     /locus_tag="JN001_003690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001737966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HAY9054762.1"
                     /translation="MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQ
                     DGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDAW
                     VEVKGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRI
                     AGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEV
                     LATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSA
                     QQTDVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDI
                     DDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGDVKDVLLL
                     DVTPLSLGIETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAAD
                     NKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDKNSGKEQKITIKASSGLN
                     EDEIQKMVRDAEANAEADRKFEELVQTRNQGDHLLHSTRKQVEEAGDKLPADDKTAIE
                     SALTALETALKGEDKAAIEAKMQELAQVSQKLMEIAQQQHAQQQTAGADASANNAKDD
                     DVVDAEFEEVKDKK"
     gene            2191..3321
                     /gene="dnaJ"
                     /locus_tag="JN001_003691"
     CDS             2191..3321
                     /gene="dnaJ"
                     /locus_tag="JN001_003691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HAY9054763.1"
                     /translation="MAKQDYYEILGVSKTAEEREIKKAYKRLAMKYHPDRNQGDKEAE
                     AKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGGGADFSDIFGDVFGDIF
                     GGGRGRQRAARGADLRYNMELTLEEAVRGVTKEIRIPTLEECDVCHGSGAKPGTQPQT
                     CPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERSKTLSVKIPA
                     GVDTGDRIRLAGEGEAGQHGAPAGDLYVQVQVKQHPIFEREGNNLYCEVPINFAMAAL
                     GGEIEVPTLDGRVKLKVPGETQTGKLFRMRGKGVKSVRGGAQGDLLCRVVVETPVGLN
                     EKQKQLLQELQESFGGPTGEHNSPRSKSFFDGVKKFFDDLTR"
     gene            complement(3425..3634)
                     /gene="mokC"
                     /locus_tag="JN001_003692"
     CDS             complement(3425..3634)
                     /gene="mokC"
                     /locus_tag="JN001_003692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system toxin MokC"
                     /protein_id="HAY9054764.1"
                     /translation="MLNTCRVPLTDRKVKEKRAMKQHKAMIVALIVICITAVVAALVT
                     RKDLCEVHIRTGQTEVAVFTAYESE"
     gene            4163..5329
                     /gene="nhaA"
                     /locus_tag="JN001_003693"
     CDS             4163..5329
                     /gene="nhaA"
                     /locus_tag="JN001_003693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter NhaA"
                     /protein_id="HAY9054765.1"
                     /translation="MKHLHRFFSSDASGGIILIIAAILAMMMANSGATSGWYHDFLET
                     PVQLRVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAI
                     GGMIVPALLYLAFNYADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALA
                     IIDDLGAIIIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGVRRTGVYILVGVVLWTA
                     VLKSGVHATLAGVIVGFFIPLKEKHGRSPAKRLEHVLHPWVAYLILPLFAFANAGVSL
                     QGVTLDGLTSILPLGIIAGLLIGKPLGISLFCWLALRLKLAHLSEGTTYQQIMAVGIL
                     CGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLRVRLRPSV"
     gene            5395..6294
                     /gene="nhaR"
                     /locus_tag="JN001_003694"
     CDS             5395..6294
                     /gene="nhaR"
                     /locus_tag="JN001_003694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_705976.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional activator NhaR"
                     /protein_id="HAY9054766.1"
                     /translation="MSHINYNHLYYFWHVYKEGSVVGAAEALYLTPQTITGQIRALEE
                     RLQGKLFKRKGRGLEPSELGELVYRYADKMFTLSQEMLDIVNYRKESNLLFDVGVADA
                     LSKRLVSSVLNAAVVEGEPIHLRCFESTHEMLLEQLSQHKLDMIISDCPIDSTQQEGL
                     FSVRIGECGVSFWCTNPPPEKPFPACLEERRLLIPGRRSMLGRKLLNWFNSQGLNVEI
                     LGEFDDAALMKAFGAMHNAIFVAPTLYAYDFYADKTVVEIGRVENVMEEYHAIFAERM
                     IQHPAVQRICNTDYSALFSPAAR"
     gene            complement(6332..>6800)
                     /locus_tag="JN001_003695"
     CDS             complement(6332..>6800)
                     /locus_tag="JN001_003695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000871680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054767.1"
                     /translation="RFNYNLNTILLVNLMTCGFEDQSIDTGRFVLSRINNENYQFHHI
                     RFDCIQGEQGELVFEPSDVEYYFEPVTIQESGTSILKNELENSEDGAGQVGFQLSNDG
                     TNEIQYGKSNYYSFQHPHEGSNQIPLFIRPRTYGNNVSSGQIMSRVKIVVMYN"
BASE COUNT         1738 a         1600 c         1757 g         1705 t
ORIGIN      
        1 ctgcgcaaaa gcacaaaaaa tttttgcatc tcccccttga tgacgtgggt tacgacccca
       61 tttagtagtc aaccgcagtg agtgagtctg caaaaaaatg aaattgggca gttgaaacca
      121 gacatttcgc ccctattaca gactcacaac cacatgatga ccgaatatat agtggagacg
      181 tttagatggg taaaataatt ggtatcgacc tgggtactac caactcttgt gtagcgatta
      241 tggatggcac cactcctcgc gtgctggaga acgccgaagg cgatcgcacc acgccttcta
      301 ttattgccta tacccaggat ggtgaaactc tggttggtca gccggctaaa cgtcaggcag
      361 tgacgaaccc gcaaaacacc ctgtttgcga ttaaacgcct gattggccgc cgcttccagg
      421 acgaagaagt acagcgtgat gtttccatca tgccgttcaa aattattgct gctgataacg
      481 gcgacgcatg ggtcgaagtt aaaggccaga aaatggcacc gccgcagatt tctgctgaag
      541 tgctgaaaaa aatgaagaaa accgctgaag attacttggg tgaaccggta actgaagctg
      601 ttatcaccgt accggcatac tttaacgatg ctcagcgtca ggcaaccaaa gacgcaggcc
      661 gtatcgctgg tctggaagta aaacgtatca tcaacgaacc gaccgcagct gcgctggctt
      721 acggtctgga caaaggtact ggcaaccgta ctatcgcggt ttatgacctg gggggtggta
      781 ctttcgatat ttctattatc gaaatcgacg aagttgatgg cgaaaaaacc ttcgaagttc
      841 tggctaccaa cggtgatacc cacctgggtg gtgaagactt cgacagccgt ctgatcaact
      901 acctggttga agaattcaag aaagatcagg gcattgacct gcgcaacgat ccgctggcaa
      961 tgcagcgcct gaaagaagcg gcagaaaaag cgaaaatcga actgtcttcc gctcagcaga
     1021 ccgacgttaa cctgccgtac atcactgcag atgcgaccgg tccgaaacac atgaacatca
     1081 aagtgactcg tgcgaaactg gaaagcttgg ttgaagatct ggtaaaccgt tccattgagc
     1141 cgctgaaagt tgcactgcag gacgctggcc tgtccgtatc tgatatcgac gacgttatcc
     1201 tcgttggtgg tcagactcgt atgccaatgg ttcagaagaa agttgctgag ttctttggta
     1261 aagagccgcg taaagacgtt aacccggacg aagctgtagc aatcggtgct gctgttcagg
     1321 gtggtgttct gactggtgac gtgaaagacg tactgctgct ggacgttacc ccgctgtctc
     1381 tgggtatcga aaccatgggc ggtgtgatga cgacgctgat cgcgaaaaac accactatcc
     1441 cgaccaagca cagccaggtg ttctctaccg ctgaagacaa ccagtctgcg gtaaccatcc
     1501 atgtgctgca gggtgaacgt aaacgtgcgg ctgataacaa atctctgggt cagttcaacc
     1561 tggatggtat caacccggca ccgcgcggca tgccgcagat cgaagttacc ttcgatatcg
     1621 atgctgacgg tatcctgcac gtttccgcga aagataaaaa cagcggtaaa gagcagaaga
     1681 tcaccatcaa ggcttcttct ggtctgaacg aagatgaaat ccagaaaatg gtacgcgacg
     1741 cagaagctaa cgccgaagct gaccgtaagt ttgaagagct ggtacagact cgcaaccagg
     1801 gcgaccatct gctgcacagc acccgtaagc aggttgaaga agcaggcgac aaactgccgg
     1861 ctgacgacaa aactgctatc gagtctgcac tgactgcact ggaaactgct ctgaaaggtg
     1921 aagacaaagc cgctatcgaa gcgaaaatgc aggagctggc acaggtttcc cagaaactga
     1981 tggaaatcgc ccagcagcaa catgcccagc agcagactgc cggtgctgat gcttctgcaa
     2041 acaacgcgaa agatgacgat gttgtcgacg ctgaatttga agaagtcaaa gacaaaaaat
     2101 aatcgcccta taaacgggta attatactga cacgggcgaa ggggaatttc ctctccgccc
     2161 gtgcattcat ctaggggcaa tttaaaaaag atggctaagc aagattatta cgagatttta
     2221 ggcgtttcca aaacagcgga agagcgtgaa atcaaaaagg cctacaaacg cctggccatg
     2281 aaataccacc cggaccgtaa ccagggtgac aaagaggccg aggcgaaatt taaagagatc
     2341 aaggaagctt atgaagttct gaccgactcg caaaaacgtg cggcatacga tcagtatggt
     2401 catgctgcgt ttgagcaagg cggcatgggc ggcggcggtt ttggcggcgg cgcagacttc
     2461 agcgatattt ttggtgacgt tttcggcgat atttttggcg gcggacgtgg tcgtcaacgt
     2521 gcggcgcgcg gtgctgattt acgctataac atggagctca ccctcgaaga agctgtacgt
     2581 ggcgtgacca aagagatccg cattccgact ctggaagagt gtgacgtttg ccacggtagc
     2641 ggtgcaaaac caggtacaca gccgcagacc tgtccgacct gtcatggttc tggtcaggtg
     2701 cagatgcgtc agggtttctt tgccgtgcag cagacctgtc cacactgtca gggccgcggt
     2761 acgctgatca aagatccgtg caacaaatgt catggtcatg gtcgtgttga gcgcagcaaa
     2821 acgctgtccg ttaaaatccc ggcaggggtg gacactggag accgcatccg tcttgcgggc
     2881 gaaggtgaag cgggccagca tggcgcaccg gcaggcgatc tgtacgttca ggttcaggtt
     2941 aaacagcacc cgattttcga gcgtgaaggc aacaacctgt attgcgaagt cccgatcaac
     3001 ttcgctatgg cggcgctggg tggcgaaatc gaagtaccga cccttgatgg tcgcgtcaaa
     3061 ctgaaagtgc ctggcgaaac ccagaccggt aagcttttcc gtatgcgcgg taaaggcgtc
     3121 aagtctgtcc gcggtggcgc acagggtgat ttgctgtgcc gcgttgtcgt cgaaacaccg
     3181 gtaggcctga acgagaagca gaaacagctg ctgcaagagc tgcaagaaag cttcggtggc
     3241 ccaaccggcg agcacaacag cccgcgctca aagagcttct ttgatggtgt gaagaagttt
     3301 tttgacgacc tgacccgcta acctccccaa aagcctgccc gtgggcaggc ctgggtaaaa
     3361 atagggtgcg ttgaagatat gcgagcacct gtaaagtggc ggggatcact ccccgccgtt
     3421 gctcttactc ggattcgtaa gccgtgaaaa cagcaacctc cgtctggcca gttcggatgt
     3481 gaacctcaca gaggtctttt ctcgttacca gcgccgccac tacggcggtg atacagatga
     3541 cgatcagggc gacaatcatc gccttatgct gcttcattgc tctcttctcc ttgaccttac
     3601 ggtcagtaag aggcactcta catgtgttca gcatataggg ggcctcgggt tgatggtaaa
     3661 atatcactcg gggcttttct ctatctgccg ttcagctaat gcctgagaca gacagcctca
     3721 agcacccgcc gctattatat cgctctcttt aacccatttt gttttatcga ttctaatcct
     3781 gaagacgcct cgcatttttg tggcgtaatt ttttaatgat ttaattattt aactttaatt
     3841 tatctcttta tcgcaattat tgacgacaag ctggattatt tttgaaatat tgtcctaaca
     3901 aataacgccg actgacaaga aattaattat tacttttcct aattaatccc tcagaaatcc
     3961 tcaccttaag ctatgattat ctgagcttag ggtcactcgt cagcgcttac agccgtcaaa
     4021 aactcatctc accgctgatg gcgaaaattc tacaaaggct cgtaaaaaac gaattattcc
     4081 tacactataa tctgatttta acgatgattc gtgcggggta aaatagtaaa aacgatttat
     4141 tcacctgaaa gagaaataaa aagtgaaaca tctgcatcga ttctttagca gtgatgcctc
     4201 gggaggcatt attcttatca ttgccgctat cctggcgatg atgatggcca acagcggcgc
     4261 aaccagtgga tggtatcacg actttctgga gacgccggtt cagctccggg ttggttcact
     4321 cgaaatcaac aaaaacatgc tgttatggat aaatgacgcg ctgatggcgg tatttttcct
     4381 gttagtcggt ctggaagtta aacgtgaact gatgcaagga tcgctagcca gcttacgcca
     4441 ggccgcattt ccagttatcg ccgctattgg tgggatgatt gtgccggcat tactctatct
     4501 ggcctttaac tatgccgatc cgattacccg cgaagggtgg gcgatcccgg cggctactga
     4561 cattgccttt gcacttggag tgctggcgct gttgggaagt cgtgttccgt tagcactgaa
     4621 gatctttttg atggctctgg ctattatcga cgatcttggg gccatcatta tcatcgcatt
     4681 gttctacact aatgacttat cgatggcctc tcttggcgtc gcggctgtag caattgcggt
     4741 actcgcggta ttgaatctgt gtggtgtacg ccgcacgggc gtctatattc tggttggcgt
     4801 agtgttgtgg actgcggtgt tgaaatcggg ggttcacgca accttggcgg gggtaattgt
     4861 cggcttcttt attcctttga aagagaagca tgggcgttct ccagcgaagc gactggagca
     4921 tgtgttacac ccgtgggtgg cgtatctgat tttgccgctg tttgcatttg ctaatgctgg
     4981 cgtttcactg caaggcgtca cgctggatgg cttgacctcc attctgccat tggggatcat
     5041 cgctggcttg ctgattggca aaccgctggg gattagtctg ttctgctggt tggcgctgcg
     5101 tttgaaactg gcgcatctgt ctgagggaac gacttatcag caaattatgg cggtggggat
     5161 cctgtgcggt atcggtttta ctatgtctat ctttattgcc agcctggcct ttggtagcgt
     5221 agatccagaa ctgattaact gggcgaaact cggtatcctg gtcggttcta tctcttcggc
     5281 ggtaattgga tacagctggt tacgcgttcg tttgcgtcca tcagtgtgac aggacggttt
     5341 accggggagc cataaacggc tcccttttca ttgttatcag ggagagaaat gagcatgtct
     5401 catatcaatt acaaccactt gtattacttc tggcatgtct ataaagaagg ttccgtggtt
     5461 ggcgcagcgg aggcgcttta tttaactcca caaaccatta ccggacagat ccgggctctg
     5521 gaagagcgcc tgcaaggcaa attatttaag cgcaagggac gtggtctcga acccagcgag
     5581 ctgggagaac tggtctatcg ctatgccgat aaaatgttca ccttaagcca ggaaatgctg
     5641 gatattgtga actatcgcaa agaatccaat ttattgtttg acgttggcgt ggctgatgca
     5701 ctttccaaac gcctggtcag tagcgtgctg aatgctgcag tggtagaagg cgagccgatt
     5761 catcttcgct gcttcgaatc cacccacgaa atgctactgg agcaattaag ccagcataaa
     5821 ctggatatga tcatttccga ctgtccgata gactctacgc agcaggaagg cctgttctcc
     5881 gtgagaattg gcgaatgtgg cgtgagtttc tggtgtacaa atccaccacc agaaaaaccg
     5941 ttcccggctt gtctggaaga acggcgactt ttgattcctg ggcgacgttc aatgttaggg
     6001 cgcaaattgc ttaactggtt taactcccag ggattaaacg tagaaatcct cggcgagttt
     6061 gatgatgccg cgttgatgaa agcttttggt gcaatgcaca atgcaatctt cgttgcccca
     6121 acgctttatg catatgactt ttatgccgat aaaactgtcg tagaaattgg tcgcgtcgag
     6181 aatgtgatgg aagagtacca tgctattttt gctgagcgga tgattcagca cccggcggta
     6241 cagcgaatct gcaatacgga ttattctgcg ctttttagtc cagcggcgcg ttaatcggca
     6301 gctcccccaa agttaaagtg gaggagatag attagttgta cataaccacg attttgactc
     6361 ggctcattat ttgcccgctt gagacattat ttccatatgt acgcgggcga ataaatagag
     6421 gaatctgatt acttccttca tggggatgct gaaaagagta gtaattgctt ttaccatact
     6481 ggatttcatt cgtaccatca ttggagagtt gaaagcctac ttgacccgca ccgtcctcac
     6541 tgttttctaa ctcatttttt aatatgctgg ttcctgactc ctgtatcgtc actggttcaa
     6601 agtaatattc aacatcactg ggttcaaaaa ctaattcacc ttgctcgccc tggatgcagt
     6661 caaatcttat atgatgaaac tgataatttt cattattgat acgagacagt acaaatcgtc
     6721 cagtgtcgat ggattgatct tcaaaaccac aggtcattaa atttaccagt aaaatagtat
     6781 ttaaattata attaaagcgg
//
LOCUS       DADMJE010000193         6590 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.196, whole genome shotgun sequence.
ACCESSION   DADMJE010000193 DADMJE010000000
VERSION     DADMJE010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6590
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.196"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            18..173
                     /locus_tag="JN001_003696"
                     /pseudo
     CDS             18..173
                     /locus_tag="JN001_003696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706342.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter"
     gene            166..1947
                     /locus_tag="JN001_003697"
     CDS             166..1947
                     /locus_tag="JN001_003697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SmdB family multidrug efflux ABC transporter
                     permease/ATP-binding protein"
                     /protein_id="HAY9054768.1"
                     /translation="MRSFSQLWPTLKRLLAYGSPWRKPLGIAVLMMWVAAAAEVSGPL
                     LISYFIDNMVAKNNLPLKMVAGLAAAYVGLQLFAAGLHYAQSLLFNRAAVGVVQQLRT
                     DVMDAALRQPLSEFDTQPVGQVISRVTNDTEVIRDLYVTVVATVLRSAALVGAMLVAM
                     FSLDWRMALVAIMIFPVVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEIINGMSVIQ
                     QFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSSLILCGLLMLFGFSAS
                     GTIEVGVLYAFISYLGRLNEPLIELTTQQAMLQQAVVAGERVFELMDGPRQQYGNDDR
                     PLQSGTIEVDNVSFAYRDDNLVLKNINLSVPSRNFVALVGHTGSGKSTLASLLMGYYP
                     LTEGEIRLDGRPLSSLSHSALRQGVAMVQQDPVVLADTFLANVTLGRDISEERVWQAL
                     ETVQLAELARSMSDGIYTPLGEQGNNLSVGQKQLLALARVLVETPQILILDEATASID
                     SGTEQAIQHALAAVREHTTLVVIAHRLSTIVDADTILVLHRGQAVEQGTHQQLLAAQG
                     RYWQMYQLQLAGEELAASVREEESLSA"
     gene            2128..2466
                     /gene="glnK"
                     /locus_tag="JN001_003698"
     CDS             2128..2466
                     /gene="glnK"
                     /locus_tag="JN001_003698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HAY9054769.1"
                     /translation="MKLVTVIIKPFKLEDVREALSSIGIQGLTVTEVKGFGRQKGHAE
                     LYRGAEYSVNFLPKVKIDVAIADDQLDEVIDIVSKAAYTGKIGDGKIFVAELQRVIRI
                     RTGEADEAAL"
     gene            2496..3782
                     /gene="amtB"
                     /locus_tag="JN001_003699"
     CDS             2496..3782
                     /gene="amtB"
                     /locus_tag="JN001_003699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter AmtB"
                     /protein_id="HAY9054770.1"
                     /translation="MKIATIKTGLASLAMLPGLVMAAPAVADKADNAFMMICTALVLF
                     MTIPGIALFYGGLIRGKNVLSMLMQVTVTFALVCILWVVYGYSLAFGEGNNFFGNVNW
                     LMLKNIELTAVMGSIYQYIHVAFQGSFACITVGLIVGALAERIRFSAVLIFVVVWLTL
                     SYIPIAHMVWGGGLLASHGALDFAGGTVVHINAAIAGLVGAYLIGKRVGFGKEAFKPH
                     NLPMVFTGTAILYIGWFGFNAGSAGTANEIAALAFVNTVVATAAAILGWIFGEWALRG
                     KPSLLGACSGAIAGLVGVTPACGYIGVGGALIIGVVAGLAGLWGVTMLKRLLRVDDPC
                     DVFGVHGVCGIVGCIMTGIFAASSLGGVGFAEGVTMGHQLLVQLESIAITIVWSGVVA
                     FIGYKLADLTVGLRVPEEQELEGLDVNSHGENAYNA"
     gene            complement(3831..4691)
                     /gene="tesB"
                     /locus_tag="JN001_003700"
     CDS             complement(3831..4691)
                     /gene="tesB"
                     /locus_tag="JN001_003700"
                     /EC_number="3.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HAY9054771.1"
                     /translation="MSQALKNLLALLNLEKIEAGLFRGQSEDLGLRQVFGGQVVGQAL
                     YAAKETVPEERLVHSFHSYFLRPGDSKKPIIYDVETLRDGNSFSARRVAAIQNGKPIF
                     YMTASFQAPEAGFEHQKTMPSAPAPDGLPSETQIAQSLAHLLPPVLKDKFICDRPLEV
                     RPVEFHNPLKGHVAEPHRQVWIRANGSVPDDLRVHQYLLGYASDLNFLPVALQPHGIG
                     FLEPGIQIATIDHSMWFHRPFNLNEWLLYSVESTSASSARGFVRGEFYTQDGVLVAST
                     VQEGVMRNHN"
     gene            4909..5481
                     /locus_tag="JN001_003701"
     CDS             4909..5481
                     /locus_tag="JN001_003701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HAY9054772.1"
                     /translation="MKLVHMASGLAVAIALAACADKSADIQTPAPAANTSISATQQPA
                     IQQPNVSGTVWIRQKVALPPDAVLTVTLSDASLADAPSKVLAQKAVRTEGKQSPFSFV
                     LPFNPADVQPNARILLSAAITVNDKLVFITDTVQPVINKGGTKADLTLVPVQQTAVPV
                     QASGGATTTVPSTSPTQVNPSSAVPAPTQY"
     gene            complement(5512..5823)
                     /locus_tag="JN001_003702"
     CDS             complement(5512..5823)
                     /locus_tag="JN001_003702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706349.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HAY9054773.1"
                     /translation="MEKEDSFPQRVWQIVAAIPEGYVTTYGDVAKLAGSPRAARQVGG
                     VLKRLPEGSTLPWHRVVNRHGTISLTGPDLQRQRQALLAEGVMVSGSGQIDLQRYRWN
                     Y"
     gene            5986..6082
                     /gene="ffs"
                     /locus_tag="JN001_003703"
     ncRNA           5986..6082
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="JN001_003703"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            6202..6555
                     /locus_tag="JN001_003704"
     CDS             6202..6555
                     /locus_tag="JN001_003704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1428 domain-containing protein"
                     /protein_id="HAY9054774.1"
                     /translation="MKYVDGFVVAVPADKKDAYREMAAKAAPLFKEFGALRIVECWAS
                     DVPDGKVTDFRMAVKAEENEEVVFSWIEYPSKEVRDAANQKMMSDPRMKEFGESMPFD
                     GKRMIYGGFESIIDE"
BASE COUNT         1444 a         1636 c         1916 g         1594 t
ORIGIN      
        1 gggatgcgtt catataaatt attgtgatgc agcacggaca tatcgcccag cgtggcaatc
       61 atgatgagtt ggcgcaacaa agcggctggt atcgcgatat gtatcgctat caacaactgg
      121 aggcggcgct cgacgacgct ccggaaattc gcgaggaggc cgtcgatgcg tagttttagc
      181 caactgtggc cgactctcaa gcgtctgtta gcgtacggtt cgccgtggcg taaaccgctg
      241 gggattgcgg tcctgatgat gtgggttgcg gcagcggcag aagtcagtgg gccgctgctt
      301 atcagctatt ttatcgacaa tatggtagcg aaaaataacc tgccgttgaa aatggttgca
      361 gggctggctg cggcgtatgt tgggctacaa ctgtttgccg ccgggctaca ttacgcgcag
      421 tcgctgctgt ttaatcgggc ggcagtaggc gtagtgcaac agttgcgtac cgacgtgatg
      481 gatgccgcat tgcgccagcc attaagcgag tttgataccc aacccgtcgg gcaggtgatt
      541 tcccgcgtca ctaatgacac tgaagtgatc cgcgatctct acgttaccgt agtggcaact
      601 gtcctgcgta gcgccgcact ggtgggcgcg atgctggtgg cgatgttcag cctcgactgg
      661 cgaatggcgc tggtggcgat aatgattttc ccggtggtgc tggtggtaat ggtgatatac
      721 cagcgttaca gcacgccgat tgtccgtcgt gtgcgcgcct atctggcgga tatcaacgac
      781 ggctttaacg aaatcatcaa tggcatgagc gttatccagc agttccgtca gcaggcgcga
      841 tttggcgaac gtatggggga ggccagtcgt tcacactata tggccaggat gcaaaccctg
      901 cgcctcgacg gttttctgct gcgtccgctg ctgagtctgt tttcatcgct cattctttgt
      961 ggcttgttga tgctgtttgg cttctccgct agcggcacca ttgaagtagg cgtgctgtat
     1021 gcgtttatca gctatcttgg gcgacttaac gaacccttaa tcgaactgac cacgcaacag
     1081 gcgatgctgc aacaggctgt tgttgctggt gagcgcgtgt ttgaactgat ggacggaccg
     1141 cgccagcaat atggcaatga tgatcgcccg ttacagagtg gcaccatcga agtcgataac
     1201 gtgtcatttg cttatcgcga tgacaatctg gtgctaaaga acattaatct ctctgtgcct
     1261 tcgcgtaact ttgtggcact ggtcgggcat accggcagtg gcaaaagcac cctcgccagt
     1321 ttattgatgg gctattaccc gctaacggaa ggtgagattc gccttgatgg tcgtccatta
     1381 agttcgctaa gtcacagcgc gctgcgccag ggcgtggcaa tggtgcagca agatccggtg
     1441 gtgctggcgg ataccttcct cgccaacgtg acgctggggc gtgatatctc cgaagaacgc
     1501 gtctggcagg cgctggaaac cgtgcaactg gcggagctgg cgcgcagcat gagtgatggt
     1561 atttatacgc cgctgggcga gcaggggaat aatctctccg tcgggcaaaa gcaactgctg
     1621 gcactggcac gcgtgttggt ggagacgccg caaatcctga tccttgatga ggcaaccgcc
     1681 agcattgact ccggtactga acaggcgatt caacatgctc tggcggctgt gcgtgaacat
     1741 accacgctgg tggtgattgc tcaccgctta tcgaccattg ttgatgccga caccattctg
     1801 gtgcttcatc gtgggcaagc cgtggagcag ggcactcacc agcaactgct ggcggcccag
     1861 ggacgctact ggcagatgta tcaactgcaa cttgcgggcg aagagctggc agccagcgtg
     1921 cgtgaagaag aatcattgag cgcctgaata gcgcaatatt tcatcgttgg tgcaaaaatg
     1981 taacgcactg tgcactgtca tagtgcgttt tcattttcaa tcttcttaac ttcctgctct
     2041 ctttctcgtt tttcatttct ggcacaccgc ttgcaatacc ttcttcgtgt agcagaacca
     2101 ttaccgaatt ctgactggag gggatctatg aagctggtga ccgtgataat caaaccattc
     2161 aagctggaag acgttcgtga agcgttatct tccattggta ttcagggcct gaccgtcacc
     2221 gaagtgaaag gtttcgggcg tcagaaaggg catgccgagc tgtaccgggg ggcggaatac
     2281 agcgtcaact tcctgccaaa agtaaaaatt gatgtggcaa ttgctgatga ccaactcgat
     2341 gaagtgatcg atatcgtcag taaggcggct tacaccggaa aaattggcga cggcaaaatc
     2401 ttcgtcgctg aattgcaacg cgtcattcgt attcgtaccg gcgaagccga cgaagcggcg
     2461 ctgtaatctc tggcacacag caacaggaac gaaaaatgaa gatagcgacg ataaaaactg
     2521 ggcttgcttc actggcgatg ctgccgggac tggtaatggc tgcacctgcg gtggccgata
     2581 aagccgacaa tgcgtttatg atgatttgta ctgcgctggt gctgtttatg actattccgg
     2641 ggattgccct gttttacggt gggttgattc gcggcaaaaa cgtgctgtcg atgctgatgc
     2701 aggtgacggt gacgtttgca ctggtctgta ttctctgggt ggtttacggt tactcgctgg
     2761 cgtttggtga gggtaacaac ttcttcggca acgttaactg gttgatgctg aaaaacatcg
     2821 aactgacggc ggtgatgggc agcatttatc agtatatcca cgtagcgttt cagggatcgt
     2881 ttgcctgcat taccgtaggc ttgatagttg gggcgctggc ggaacgaatc cgcttctcag
     2941 ctgtgttgat tttcgtggtg gtatggctga cgctctctta cattccgatt gcgcatatgg
     3001 tgtggggcgg cggtttgctg gcttctcacg gtgcactgga tttcgcgggt ggcacagtgg
     3061 tgcacattaa cgccgcaatc gccggtctgg tgggcgcgta tctgataggc aaacgcgtgg
     3121 gcttcggtaa agaggcgttt aaaccgcaca acctgccgat ggtcttcacc gggactgcca
     3181 ttctctatat cggttggttt ggctttaacg ccgggtcagc gggcacggcg aatgaaatcg
     3241 cggcactggc atttgtgaat actgtggtcg caacggcggc ggcaattctt ggctggatct
     3301 tcggtgaatg ggcgctgcgt ggtaagcctt cactgctggg ggcgtgttct ggcgcgattg
     3361 ccggtctggt cggcgtgacg ccagcgtgcg gctacattgg ggttggcggc gcgttgatta
     3421 tcggcgtggt agctggtctg gcgggcttgt ggggcgttac catgctcaaa cgcttgctgc
     3481 gggtggatga tccctgcgat gtcttcggtg tgcacggcgt ttgtggcatt gtcggctgta
     3541 tcatgaccgg gatttttgcc gccagctcgc tgggcggcgt gggcttcgct gaaggtgtga
     3601 cgatgggtca tcagttgctg gtacagctgg aaagcatcgc cattacgatc gtctggtccg
     3661 gtgtggtggc atttattggc tacaaattgg cggatctgac ggttggtctg cgtgtaccgg
     3721 aagagcagga gctagaaggg ctggatgtca acagtcacgg cgagaatgcc tataacgcgt
     3781 aacaagcact gcaaaaaaca gccggacggt tttcacctcc ggctattttt ttaattgtga
     3841 ttacgcatca ccccttcctg aacggtcgag gcaaccagta cgccgtcctg ggtataaaac
     3901 tcaccgcgca caaagccacg tgcgctggac gccgaggtgc tctccacgct atacagcagc
     3961 cattcattca aattaaacgg gcgatggaac cacatggaat ggtcaatggt ggcaatctga
     4021 atccccggtt cgagaaaacc gatgccgtgc ggctgtagag ctaccggcag gaagttaaga
     4081 tcagaagcgt aaccgagcag atactgatga acgcgcaggt catccggcac gctaccattt
     4141 gcgcggatcc acacctgacg atgtggttct gcgacgtgac ctttcagtgg gttatgaaac
     4201 tccaccggac ggacttccag cggacgatcg cagatgaatt tatctttaag cactggcggc
     4261 agcaggtgcg ccagcgattg ggcgatttgc gtttccgaag gcaggccatc aggcgctggc
     4321 gcggacggca ttgttttttg atgttcgaaa cccgcttctg gtgcctggaa agaggccgtc
     4381 atataaaaaa tcggtttgcc gttttgaata gcagcaaccc ggcgggcgct gaagctgtta
     4441 ccatcacgca gcgtttcgac atcataaata atcggtttct tactatcgcc tgggcgaaga
     4501 aagtagctgt gaaacgaatg taccagccgc tcttccggga cggtctcttt tgcagcatac
     4561 aaggcctgac ccacgacctg gccgccaaac acctggcgta aacctaaatc ttcactctgg
     4621 ccgcgaaaga gtcctgcctc aattttttcc agatttaaca atgccagtaa attttttagc
     4681 gcctgactca tataactctc cagtaacaaa gctgccgcag caagccaaag tgagttgagt
     4741 ataacgcaaa tttgccactg gtccgatggg tgcaataatc tgaattacgg gctaattaca
     4801 ggcagaaatg cgtgatgtgt gccacactta ttgacgttac tattttgtta accactcttc
     4861 cggcgaggaa agttagcccg ctggtgcatt gataataagg agaaatgaat gaaactcgtg
     4921 cacatggcca gtggtttagc ggttgcgatt gcgttggcgg cttgcgcaga taaaagcgcg
     4981 gatattcaga cgccagcccc ggctgcaaat acgtctattt cagcaacaca acaacctgct
     5041 atccagcaac cgaatgtctc cggtaccgtc tggatccggc agaaagtcgc actgccgcct
     5101 gatgctgtgc tgaccgtgac actttctgac gcgtcgttag ccgatgcacc gtcaaaagtg
     5161 ctggcgcaga aagcggtgcg taccgaaggt aaacagtcac cattcagctt tgttctgcca
     5221 tttaacccgg cagatgttca gccgaacgcg cgtattctgt tgagtgcggc gattaccgtg
     5281 aatgacaaac tggtatttat taccgatacc gttcagccgg tgatcaacaa gggcggaact
     5341 aaagccgacc tgacattggt gccggtgcag caaaccgccg tgccggttca ggccagcggt
     5401 ggtgcaacga ctaccgtacc ttcgacttca ccaactcagg tgaatccgtc ttcggcagtt
     5461 ccagctccta cgcaatatta agcgacgtta accctctccg cccggagagg gttagtagtt
     5521 ccagcgataa cgctgcaagt cgatttgccc gcttcccgat accatcacac cttctgccag
     5581 taatgcctgt cgctgacgct gtaaatccgg tccggttagc gaaattgtgc cgtggcgatt
     5641 aaccacccgg tgccagggta aggtgctgcc ttcagggaga cgctttaaca caccgcccac
     5701 ctggcgcgcg gcgcggggcg atcccgccag tttcgccaca tcaccgtaag tggtgacata
     5761 gccttcggga atagcggcga cgatttgcca gacgcgttgg ggaaatgaat cttctttttc
     5821 catcttttct tcctgaggta atttttcagc ataatctgga aaaacgcccg agtgaagtcg
     5881 cattgcgcaa gaaaccagca tctggcacgc gatgggttgc aattagccgg ggcagcagtg
     5941 ataatgtgcc tgcgcgttgg ttctcaacgc tctcaatggg ggctctgttg gttctcccgc
     6001 aacgctactc tgtttaccag gtcaggtccg gaaggaagca gccaaggcag atgacgcgtg
     6061 tgccgggatg tagctggcag ggcccccacc catttctgcc tcccaccgtt tcgtcaaaaa
     6121 aaaccaacat ggctaaactt taaccacaac tgacgtcgca agaattgtct ggctgcgcag
     6181 tacgcttcgg aggtatgtct gatgaagtat gttgatggtt ttgtggttgc cgttcctgcc
     6241 gataaaaagg atgcctatcg ggaaatggcc gctaaggctg cgccattgtt taaagagttt
     6301 ggcgcgcttc gtattgtcga atgctgggcc agcgatgtac cggatggcaa agtgaccgat
     6361 tttcgtatgg cggtgaaagc ggaagagaat gaagaggttg tctttagctg gattgaatac
     6421 ccttcaaaag aggtccgcga cgctgctaat caaaagatga tgtcggaccc acggatgaaa
     6481 gagttcggcg agtccatgcc gtttgacggc aagcgaatga tctatggcgg attcgagtca
     6541 atcatcgacg aataggtagc gtgacgggct gtgcggcgtg ccgtcagccc
//
LOCUS       DADMJE010000194         6389 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.197, whole genome shotgun sequence.
ACCESSION   DADMJE010000194 DADMJE010000000
VERSION     DADMJE010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6389
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.197"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..205)
                     /locus_tag="JN001_003705"
     CDS             complement(<1..205)
                     /locus_tag="JN001_003705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311770.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="knotted carbamoyltransferase YgeW"
                     /protein_id="HAY9054775.1"
                     /translation="MKTVNELIKDINSLTSHLHEKDFLLTWEQTPDELKQVLDVAAAL
                     KALRAENISTKVFNSGLGISVFRD"
     gene            684..2461
                     /locus_tag="JN001_003706"
                     /pseudo
     CDS             684..2461
                     /locus_tag="JN001_003706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417345.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
     gene            complement(2501..2980)
                     /gene="xdhC"
                     /locus_tag="JN001_003707"
     CDS             complement(2501..2980)
                     /gene="xdhC"
                     /locus_tag="JN001_003707"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase iron sulfur-binding
                     subunit XdhC"
                     /protein_id="HAY9054776.1"
                     /translation="MNHSETITIECTINGMPFQLHAAPGTPLSELLREQGLLSVKQGC
                     CVGECGACTVLVDGTAIDSCLYLAAWAEGKEIRTLEGEAKGGKLSHVQQAYAKSGAVQ
                     CGFCTPGLIMATTAMLAKPREKPLTITEIRRGLAGNLCRCTGYQMIVNTVLDCEKTK"
     gene            complement(2977..3855)
                     /gene="xdhB"
                     /locus_tag="JN001_003708"
     CDS             complement(2977..3855)
                     /gene="xdhB"
                     /locus_tag="JN001_003708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase FAD-binding subunit XdhB"
                     /protein_id="HAY9054777.1"
                     /translation="MFDFASYHRAATLADAINLLANNPQAKLLAGGTDVLIQLHHHND
                     RYRHIVDIHNLAELRGITLAEDGSLRIGSATTFTQLIEDPITQRHLPALCAAAMSIAG
                     LQIRNVATYGGNICNGATSADSATPTLIYDAKLEIHSPRGVRFVPINGFHTGPGKVSL
                     EHDEILVAFHFPPQPKEHAGSAHFKYAMRDAMDISTIGCAAHCRLDNGNFSELRLAFG
                     VAAPTPIRCQHAEQTAQNAPLNLQTLEAISESVLQDVAPRSSWRASKEFRLHLIQMMT
                     KKVISEAVAAAGGKLQ"
     gene            complement(3866..6163)
                     /gene="xdhA"
                     /locus_tag="JN001_003709"
     CDS             complement(3866..6163)
                     /gene="xdhA"
                     /locus_tag="JN001_003709"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdenum-binding
                     subunit XdhA"
                     /protein_id="HAY9054778.1"
                     /translation="MEAREATATGESCMRVDAIAKVTGRARYTDDYVMAGMCYAKYVR
                     SPIAHGYAVSINDEQARSLPGVLAIFTWEDVPDIPFATAGHAWTLDENKRDTADRALL
                     TRHVRHHGDAIAIVVARDELTAEKAAQLVSIEWQELPVITTPEAALAEDAAPIHNGGN
                     LLKQSTMSTGNVQQTIDAADYQVQGHYQTPVIQHCHMESVTSLAWMEDDSRITIVSST
                     QIPHIVRRVVGQALDIPWSCVRVIKPFVGGGFGNKQDVLEEPMAAFLTSKLGGIPVKV
                     SLSREECFLATRTRHAFTIDGQMGVNRDGTLKGYSLDVLSNTGAYASHGHSIASAGGN
                     KVAYLYPRCAYAYSSKTCYTNLPSAGAMRGYGAPQVVFAVESMLDDAATALGIDPVEI
                     RLRNAAREGDANPLTGKRIYSAGLPECLEKGRKIFEWEKRRAECQNQQGNLRRGVGVA
                     CFSYTSNTWPVGVEIAGARLLMNQDGTINVQSGATEIGQGADTVFSQMVAETVGVPVS
                     DVRVISTQDTDVTPFDPGTFASRQSYVAAPALRSAALLLKEKIIAHAAVMLHQSAMNL
                     TLIKGHIVLVERPEEPLMSLKDLAMDAFYHPERGGQLSAESSIKTTTNPPAFGCTFVD
                     LTVDIALCKVTINRILNVHDSGHILNPLLAEGQVHGGMGMGIGWALFEEMIIDAKSGV
                     VRNPNLLDYKMPTMPDLPQLESAFVEINEPQSAYGHKSLGEPPIIPVAAAIRNAVKMA
                     TGVAINTLPLTPKRLYEEFHLAGLI"
BASE COUNT         1595 a         1511 c         1614 g         1669 t
ORIGIN      
        1 tgtcgcggaa tacggaaata cctaatccac tattaaagac tttggttgag atgttttcag
       61 cacgcagtgc ttttaatgct gcggcaacgt ccagtacttg tttcagttca tctggcgtct
      121 gttcccacgt taacaaaaaa tctttctcgt gaaggtgaga ggtcagcgaa ttgatatcct
      181 taatcagctc attaacagtt ttcatcataa agtcccggta gtggaatgac aggcaaagtg
      241 gtttatttca ctgtgacttg ccaaagtgat tggtgttttc acagctatac ctgggactaa
      301 caataagtgt gccagaatta tccgcgcggc tgcaaaagac taatttgacg gataatgtgt
      361 ggggttgatc acaaattgat gccagcttct ggttgtttgt aaaatacgaa aacgtttggc
      421 tttttttatc gcgttattta tttgctgcta agtatcagaa ataagataaa ggggcaggct
      481 atctctcttc agtttgataa actcaccgcc gtaattctca tattgatata gaaatgtgat
      541 atctcttcca taatttcatt agaaaatgat aaaaatctta tgtttttatc aaagccaatt
      601 tcgcctgagt taatatcatc atgatctgtg aaccatcaac gtcttcaatg atcgactttt
      661 aagtaagtct ggaaggtaaa gctatggagc ttgctactac gcagtcagta ttgatgcaaa
      721 ttcaaccgac aattcagcgt tttgccagaa tgcttgccag cgttttgcag cttgaggttg
      781 agatcgttga tgaaaacttg tgtcgcgtcg ccggaacggg cgcgtatggg aagtttcttg
      841 gtcgccagtt gagcggcaac tcacgcctgc tccgccacgt cctggaaacg aaaactgaaa
      901 aagttgtgac acagtctcgc ttcgatcccc tttgcgaagg ttgcgatagt aaagaaaatt
      961 gccgtgaaaa agcatttctg ggtacgcctg tcattttaca ggatcgttgt gttggggtga
     1021 taagtttgat tgccgttacc cacgagcaac aagagcatat cagtgataat ttacgcgaat
     1081 tttctgatta tgttcgccat atatccacca tttttgtttc gaaacttctg gaggatcagg
     1141 ggccaggaga taacatcagt aaaatattcg cgaccatgat cgataatatg gatcagggcg
     1201 tattagttgt tgatgatgaa agtcgggttc agtttgttaa tcagactgcc ttaaaaacac
     1261 ttggtgttgt acaaaataat attattggga aacctatccg tttcagacca ttaacatttg
     1321 agagtaattt tactcatgga catatgcagc atattgtttc gtgggacgat aaaagtgaat
     1381 taatcattgg tcaattgcat aacattcagg gccgacaatt atttttaatg gcatttcacc
     1441 aatcgcatac cagtttttct gtagcaaatg cacctgatga accacatatt gaacaattgg
     1501 ttggcgagtg ccgtgttatg cggcaattaa aacgactcat tagccgtatt gcacccagcc
     1561 catccagcgt tatggtggtt ggtgaaagcg gcacgggtaa agaagtcgtc gcccgagcaa
     1621 tccataagtt gagcggaaga cggaataaac cctttattgc tatcaactgt gccgcgattc
     1681 cggagcagct tctggaaagc gaactgttcg gttatgttaa aggcgcattt actggcgctt
     1741 ctgccaacgg taaaacaggg ttgattcagg cggcgaatac gggcacgctg tttctcgatg
     1801 aaataggtga tatgccatta atgttgcagg ctaaattact gcgcgctatt gaggcgcgtg
     1861 aaattctgcc gattggtgcc agtagcccaa tacaagtcga cattcgcatc atttctgcaa
     1921 ctaatcagaa tttggcccag ttcattgccg aaggtaaatt ccgcgaagat ctcttctacc
     1981 gacttaatgt tatcccgata actctgccac cgctgcgtga acgtcaggaa gatattgaac
     2041 attggtgcat tactttttac atctgcatac ccgtcgtctg ggatcggttt atcctggcat
     2101 tgctcccgat gtcgtcgaaa tattgcgtaa gcatcgttgg cccggaaacc tgcgcgagtt
     2161 aagcaatttg atggaatatc tggttaacgt agttccttca ggtgaagtta tcgacagcac
     2221 gctattgccg ccaaatctgc tgaataatgg cacaacggag caaagtgatg taacagaggt
     2281 cagtgaggcg cacctgtcac tcgatgatgc gggcggcacg gcgctggagg agatggaaaa
     2341 gcaaatgatc cgcgaggcgc tttcacgtca taacagcaag aagcaagttg ctgatgaact
     2401 gggcatcggc attgctacgc tctatcgcaa gattaagaaa tatgagttgt taaacacata
     2461 acctcagtga atccggcctg aattcaggcc ggatatcctt ttacttcgtt ttctcgcaat
     2521 ccagaactgt atttacaatc atctgatacc ccgtgcagcg acaaagattt cccgccagtc
     2581 cgcgacgaat ttccgtaatg gttaatggct tctcgcgtgg tttcgccagc attgccgtgg
     2641 tagccataat caggccaggc gtacaaaacc cgcactgcac tgcgccggat ttcgcataag
     2701 cctgctgaac atgagaaagt tttccgcctt tcgcttcacc ttccagcgtg cggatctctt
     2761 ttccttcagc ccaggcggca aggtataagc aactgtctat tgctgtgccg tcgaccaaca
     2821 ccgtacaggc accacattca cccacgcagc acccttgttt gacacttagc agtccttgtt
     2881 cgcggagtaa ttccgagagc ggcgtgcctg gtgcggcgtg aagctgaaaa ggcatcccgt
     2941 taatggtgca ttcgatggta attgtttcgc tgtgattcat tgcaattttc cccccgccgc
     3001 ggcgacggct tcgctaatca cttttttggt catcatctgg atgagatgca gacgaaactc
     3061 tttactggcc cgccatgaag aacgcggggc gacatcttgc aggacagatt cgctgatagc
     3121 ttccagcgtt tgcaggttta atggcgcatt ttgtgcagtc tgttcggcat gttggcagcg
     3181 aatcggcgtt ggcgcggcaa caccaaatgc caggcgtaat tcgctgaaat tgccgttatc
     3241 cagtcggcaa tgtgcggcgc agccaatcgt tgaaatatcc attgcgtcgc gcatggcata
     3301 tttaaaatgc gcgctgcccg cgtgttcttt cggctgtggc ggaaaatgaa aggcgacgag
     3361 gatttcgtca tgctcaagag acactttgcc cggcccggtg tgaaagccat taatcgggac
     3421 gaaacgaaca ccgcgcgggg agtggatctc cagtttcgcg tcataaatta gcgttggcgt
     3481 ggcagaatct gcgctggtgg caccgttgca aatatttcca ccgtaggtag cgacgttacg
     3541 gatctgcagt ccagcaatgg acatggccgc agcacataac gccgggagat gacgttgagt
     3601 tataggatct tctattagct gggtaaatgt cgttgcagag ccgatacgta gcgagccatc
     3661 ttccgccagc gtaattcccc gcagctccgc cagattatga atatcaacaa tatggcgata
     3721 acggtcattg tgatggtgga gctgaatcag tacgtcagtg ccaccggcga gcagtttggc
     3781 ctgcgggttg ttagccagca ggttgatggc atcggcaagg gttgctgcgc gatggtaaga
     3841 agcaaaatca aacatgatgt tatcctcaaa tcaatcctgc cagatggaac tcttcatata
     3901 accgttttgg cgtcagcggc agtgtattga ttgcaacacc ggtagccatc ttcaccgcgt
     3961 tacgaatagc agcggcaaca ggaattattg gtggctcacc cagtgactta tgtccgtatg
     4021 cggattgcgg ctcattgatt tcgacgaacg cgctttccag ttgtggcaga tccggcatgg
     4081 tcggcatttt gtaatccagc agattggggt tacggaccac gccgctttta gcatcgatga
     4141 tcatctcttc aaatagcgcc cagccaatgc ccattcccat tccgccgtgt acctgacctt
     4201 ctgccagcag tggattaaga atatgccctg aatcatgaac gttgaggatg cggttgatgg
     4261 tgactttgca cagcgcaata tcgaccgtca gatcaacaaa ggtacagcca aacgccggtg
     4321 ggttagtggt ggttttgatg gagctttcag cagagagctg cccgccgcgt tcagggtggt
     4381 agaaagcgtc catcgccaaa tcttttaacg acattaacgg ctcttccggt cgttcaacca
     4441 gcacgatatg gccttttatc agggtcagat tcatcgctga ctgatgtagc atgactgcgg
     4501 cgtgagcgat gattttctct tttaataata gtgccgcact gcgcagcgca ggcgcggcaa
     4561 catagctctg gcgtgaggca aatgtgccgg gatcgaacgg cgtaacgtcg gtatcttgag
     4621 ttgaaataac gcgaacgtcg ctgaccggaa cccccacggt ttctgccacc atttgcgaga
     4681 agacggtgtc ggcaccctga ccgatttccg tcgcgccgct ttgcacgttg atggttccat
     4741 cctgattcat cagaaggcgc gcgcctgcta tttctacgcc gacaggccag gtgttagagg
     4801 tgtagctaaa acaggcgacg ccaacgccgc ggcgcaaatt gccttgctgg ttctggcatt
     4861 ctgcacggcg tttttcccat tcaaagattt tccggccttt ttcaagacac tccggcaacc
     4921 ctgcgctgta aatacgtttg cccgtgagcg gattagcatc tccttcgcgg gcggcgttgc
     4981 gtaaacgaat ttcaacagga tcaataccta acgctgtcgc ggcgtcatca agcatagact
     5041 caacggcaaa tacgacttgt ggcgcgccat aaccacgcat cgcaccagcc gaggggaggt
     5101 tggtatagca ggtctttgaa ctgtaagcgt aggcacaacg aggataaagg taagcgactt
     5161 tattcccccc cgcagaagcg atggagtgcc cgtgagatgc ataagcgccg gtgttagaca
     5221 gaacatccag actataacct ttcaatgttc cgtcgcggtt cacgcccatt tgcccgtcaa
     5281 tggtaaaagc gtggcgggta cgggttgcga ggaaacactc ttcacggcta agggaaactt
     5341 tcaccggaat gccgccaagc ttgctggtca ggaatgccgc cattggctct tccagtacat
     5401 cctgtttatt accaaaaccg ccaccgacaa atggtttgat gactcgtacg catgaccagg
     5461 gaatatccag cgcctgacca accacgcggc gaacaatgtg cgggatctgg gtgctggaaa
     5521 cgatggtaat tcgcgagtca tcctccatcc acgccagcga tgttacgctt tccatgtgac
     5581 aatgttgaat aacgggggtc tgatagtgcc cctgtacctg gtagtcggcg gcatcgattg
     5641 tttgttggac attacccgtc gacatcgtgc tttgtttcag taaattgcca ccgttatgga
     5701 ttggtgcagc gtcttctgcc agcgccgctt ctggcgtggt gataacgggt aattcttgcc
     5761 actcaatgct gaccaattgc gccgcttttt ctgccgtgag ttcatcgcgg gccacgacga
     5821 tggcaatggc gtcaccatga tgacgaacat ggcgagttag cagtgcgcga tcggcggtat
     5881 cgcgcttgtt ttcgtcaagt gtccaggcat gcccagctgt agcgaatgga atatcaggca
     5941 catcttccca ggtaaaaatc gccagtacgc ccggcaaact tctggcttgt tcatcattaa
     6001 tacttacggc ataaccatgt gcgatagggc tacgtacata tttcgcataa cacatgcccg
     6061 ccataacata atcgtcagta tatcgtgccc gcccggtgac cttagcaatg gcatcgacgc
     6121 gcatgcatga ttcacccgta gcggttgctt cccgcgcttc catagaaatc ccctcgattt
     6181 gaacatttgg ttcttatggc aaagatttag tctaagcagg caagatttac gccagaaacg
     6241 acgataagcg ttaggggagg taggaagtgt gatgacgtta aaaaaacaca gatatgatac
     6301 gaaacaggag tctgaatagg ggcagtgata cgtatcaata tgagtggcga taaaatcaat
     6361 gtgataaatt gggattatta cgcatcagg
//
LOCUS       DADMJE010000195         6337 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.198, whole genome shotgun sequence.
ACCESSION   DADMJE010000195 DADMJE010000000
VERSION     DADMJE010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6337
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.198"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            30..152
                     /locus_tag="JN001_003710"
     CDS             30..152
                     /locus_tag="JN001_003710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001124879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY9054779.1"
                     /translation="MPKKMRTTRNLLLMATLLGSALFARAADKEMTIGAIYLDT"
     gene            168..1013
                     /locus_tag="JN001_003711"
     CDS             168..1013
                     /locus_tag="JN001_003711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001248814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HAY9054780.1"
                     /translation="MRQGVQDAAKDSSVQVQLIETNAQGDISKESTFVDTLVARNVDA
                     IILSAVSENGSSRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLSN
                     AAADYFIANKIDQPKIAVINCEAFEVCVQRRKGFEEVLKSRVPGAQIVANQEGTVLDK
                     AISVGEKLIISTPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFGSDMTTEIAQELE
                     NNQVLKAVVDISGKKMGNAVFAQTLKVINKQADGEKVIQVPIDLYTKTEDGKQWLATH
                     VDGLP"
     gene            1036..2547
                     /locus_tag="JN001_003712"
     CDS             1036..2547
                     /locus_tag="JN001_003712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HAY9054781.1"
                     /translation="MFTATEAVPVAKVVAGNKRYPGVVALDNVNFTLNKGEVRALLGK
                     NGAGKSTLIRMLTGSERPDSGDIWIGETRLEGDEATLTRRAAELGVRAVYQELSLVEG
                     LTVAENLCLGQWPRRNGMIDYLQMAQDAQRCLQALGVDVSPEQLVSTLSPAQKQLVEI
                     ARVMKGEPRVVILDEPTSSLASAEVELVISAVKKMSALGVAVIYVSHRMEEIRRIASC
                     ATVMRDGQVAGDVMLENTSTHHIVSLMLGRDHVDIAPVAPQEIVDQAVLEVRALRHKP
                     KLEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGLETYEQGEIVINGEKITRPDYGDM
                     LKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKISANGVLQWSTIRRLTEEVMQRMT
                     VKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVDIEAKQQIYRIVREL
                     AAEGKSVVFISSEVEELPLVCDRILLLQHGTFSQEFHSPVNVDELMSAILSVH"
     gene            2572..3570
                     /locus_tag="JN001_003713"
     CDS             2572..3570
                     /locus_tag="JN001_003713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HAY9054782.1"
                     /translation="MSASSLSLPLGKSVSLKQFVSRHINEIGLLVVIAILYLVFSLNA
                     PGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSVGPMVAFVSVCLAFLLQFEV
                     PLAIACLLVLLLGALMGTLAGVLRGVFNVPSFVATLGLWSALRGMGLFMTNALPVPID
                     ENEVLDWLGGQFLGVPVSALIMMVLFALFVFISRKTAFGRSVFAVGGNATAAQLCGIN
                     VRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAANGLEFDVIAAVVVGGTALSGGRG
                     SLFGTLLGVLVITLIGNGLVLLGINSFFQQVVRGVIIVVAVLANILLTQRSSKAKR"
     gene            3603..4697
                     /locus_tag="JN001_003714"
     CDS             3603..4697
                     /locus_tag="JN001_003714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY9054783.1"
                     /translation="MKINRIVNEGFMKTMLAAYLPGNSTVDLREVAVPTPGINQVLIK
                     MKSSGICGSDVHYIYHQHRATAAAPDKPLYQGFINGHEPCGQIVAMGQGCRHFKEGDR
                     VLVYHISGCGFCPNCRRGFPISCTGKGKAAYGWQRDGGHAEYLLAEEKDLILLPDALS
                     YEDGAFISCGVGTAYEGILRGEVSGSDNVLVVGLGPVGMMAMMLAKGRGAKRIIGVDM
                     LPERLAMAKQLGVMDHGYLATTEGLPQIIAELTHGGADVALDCSGNAAGRLLALRSTA
                     DWGRVVYIGETGKVEFEVSADLMHHQRRIIGSWVTSLFHMEKCAHDLTDWKLWPRNAI
                     THRFSLEQAGDAYALMASGKCGKVVINFPD"
     gene            4709..5581
                     /locus_tag="JN001_003715"
     CDS             4709..5581
                     /locus_tag="JN001_003715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY9054784.1"
                     /translation="MTIYTLSHGPLKLDVSDQGGVIEGFWRDTTPLLRPGKKSGVATD
                     ASCFPLVPFANRVSGNRFVWQGREYQLQPNVEWDAHYLHGDGWLGEWQCVSHSDDSLC
                     LVYEHRSGVYHYRVSQAFHLTADTLTVTLSVTNQGAETLPFGTGWHPYFPLSPQTRIQ
                     AQASGYWLEREQWLAGEFCEQLPQELDFNQLAPLPRQWVNNGFAGWNGQARIEQPQEG
                     YAIIMETTPPAPCYFIFVSDPAFDKGYAFDFFCLEPMSHAPDDHHRPEGGDLIALAPG
                     ESTTSEMSLRVEWL"
     gene            complement(5629..6051)
                     /locus_tag="JN001_003716"
     CDS             complement(5629..6051)
                     /locus_tag="JN001_003716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417038.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HAY9054785.1"
                     /translation="MNTLRYFDFGAARPVLLLIARIAVVLIFIILGFPKMMGFDGTVQ
                     YMASLGAPMPMLAAIIAVVMEVPAAILIVLGFFTRPLAVLFIFYTLGTAVIGHHYWDM
                     TGDAVGPNMINFWKNVSIAGAFLLLAITGPGAISLDRR"
     gene            complement(6148..>6337)
                     /locus_tag="JN001_003717"
     CDS             complement(6148..>6337)
                     /locus_tag="JN001_003717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="phenoxybenzoate dioxygenase"
                     /protein_id="HAY9054786.1"
                     /translation="WLCRGNPETQKAIWFNLQNGVLIGAVTLNQGREIRPIRKWIQSG
                     KTFDAKLLIDENIALKSL"
BASE COUNT         1467 a         1515 c         1835 g         1520 t
ORIGIN      
        1 ttgttaataa aaaccctaca ggaggcacta tgcctaaaaa aatgagaaca acccgtaatc
       61 tattattaat ggctacgcta ttaggtagcg cactatttgc cagggctgcg gataaagaaa
      121 tgaccattgg tgcaatatac cttgatacct agggatatta cgctggagtg cgtcagggcg
      181 ttcaggatgc ggcaaaagat tcttcagtac aggtacagtt aattgaaact aacgcccagg
      241 gtgatatttc gaaagaaagt acctttgttg ataccctcgt ggcgcgtaat gtcgatgcca
      301 ttattttatc ggcagtgtct gaaaatggca gtagccgtac cgttcgtcgc gccagtgaag
      361 cgggtattcc ggtgatttgc tacaacacct gtattaatca aaagggtgtc gataaatatg
      421 tctcggcgta tctggtcggc gatccactgg aatttggtaa aaaactgagt aacgctgccg
      481 ccgattattt tattgccaat aaaattgacc agccgaaaat tgccgtcatc aattgcgaag
      541 cctttgaagt ttgtgtgcag cgacgtaaag gatttgaaga agtattaaaa tcccgcgttc
      601 ccggcgcgca aattgtcgct aatcaggaag ggactgtttt agataaagcg atttccgttg
      661 gtgaaaaact gattatctcc acgccggatc tcaacgccat tatgggggag tcgggcggtg
      721 cgacactcgg cgcggtaaaa gcggtacgta atcaaaatca ggccggaaaa attgctgttt
      781 tcggttcgga tatgacaacc gaaattgctc aggagctgga aaacaatcag gtgctgaaag
      841 cggtagtgga tatttccggt aagaaaatgg gcaatgctgt tttcgcgcaa acattgaagg
      901 ttatcaataa acaagccgac ggtgaaaaag tgattcaggt gccaatcgat ctctatacca
      961 aaacggaaga tggtaaacag tggctggcaa cgcacgttga tggtctgccc taatcgctga
     1021 ttcgcagagg tccctatgtt cacggcaaca gaggcagtcc cggtagcaaa agtggtggca
     1081 ggaaataagc gttaccccgg cgtcgttgcg ctggataacg ttaacttcac gctcaataaa
     1141 ggcgaagttc gtgcgctgtt aggtaaaaac ggcgcgggca aatcgactct cattcgaatg
     1201 cttaccggca gcgaacgccc ggatagcggt gatatctgga ttggcgagac gcgactggaa
     1261 ggtgacgaag ctacgttgac tcgccgtgcc gctgaactgg gggttcgtgc ggtttatcag
     1321 gaattaagtc tggtggaagg gctgacggtg gcagaaaacc tctgccttgg tcaatggcct
     1381 cgccgcaacg gcatgattga ttacctgcaa atggcgcagg atgcccaacg ttgcttacag
     1441 gcgctgggcg ttgacgttag tcctgaacaa cttgtttcaa cgctaagccc ggcgcaaaag
     1501 caactggtgg aaattgcacg ggtgatgaag ggcgagccgc gcgtggtcat tcttgatgaa
     1561 cccaccagct cgcttgccag tgcagaagtt gaactggtga tcagtgcggt gaaaaagatg
     1621 tcggcactgg gcgtggcggt gatttatgtc agccaccgga tggaagaaat ccgccgcatt
     1681 gcctcctgtg ccaccgttat gcgcgatggt caggtggcgg gcgatgtgat gctcgaaaac
     1741 acctccacgc atcatattgt gtcgctaatg ctagggcgtg atcacgttga tattgcgccg
     1801 gttgcccctc aggaaattgt ggatcaggcc gtactggaag tccgtgcgtt acgccataag
     1861 cccaagctgg aggatatcag ctttacgtta cgtcgcggcg aagtgcttgg cattgctggc
     1921 ctgctggggg cagggcgcag tgaattgctg aaggcgattg ttgggctgga gacgtatgaa
     1981 cagggcgaaa ttgttatcaa cggcgagaaa atcacgcgcc ccgattacgg cgacatgctg
     2041 aaacgcggca ttggctatac gccagaaaac cgcaaagaag cggggatcat tccctggttg
     2101 ggcgttgacg aaaatacagt gctgaccaat cggcaaaaaa tcagcgccaa cggagtgctg
     2161 caatggtcca ccatccgccg cctgaccgaa gaggtgatgc agcggatgac ggtcaaggcc
     2221 gccagtagcg aaacgcccat cggcacgctt tctggtggca atcagcaaaa agtggtgatc
     2281 ggtcgttggg tctatgccgc cagccagatt ttgttgctcg acgagccaac gcgcggcgtc
     2341 gatatcgaag ccaaacagca gatttaccgt attgtccgtg agctggctgc cgaaggaaaa
     2401 agcgtggtgt ttatctccag tgaagtggag gagttgccgc tggtgtgcga ccgcatcctg
     2461 ttgttacagc acggtacgtt ctcgcaggag tttcactcgc cggtcaatgt ggatgagctg
     2521 atgtccgcca ttctgtctgt gcactgatga attttaccga ggaacctgaa gatgtctgct
     2581 tcgtcattat cattgccgct gggcaagagc gtctcgctca aacaatttgt cagtcgccat
     2641 attaatgaga tcggtttgct ggtggtaatc gccattcttt atctggtctt ctccctgaat
     2701 gcgcctggct ttatctcatt gaataaccag atgaacgtgc ttcgcgatgc tgccaccatc
     2761 gggatcgccg cctgggcaat gacgctgatt attatctccg gtgaaattga tgtcagcgtt
     2821 ggaccgatgg tggcttttgt ctcggtgtgc ctggcatttt tgctgcaatt tgaagttccg
     2881 ttggcgattg cttgtctgct ggtgttgctg ttaggcgcgc tgatgggaac gctcgccggg
     2941 gtgctgcgcg gcgtgtttaa cgtgcccagt ttcgttgcca cactggggct gtggagcgcc
     3001 ctgcgcggaa tggggctgtt tatgaccaac gcactgccag tgccgattga cgaaaacgag
     3061 gtgctggact ggctgggcgg acaatttctc ggtgtgccag tatccgcgct gatcatgatg
     3121 gtgttgtttg cgctgtttgt gttcattagc cgaaaaaccg ccttcgggcg ctcggttttt
     3181 gccgttggcg gtaatgccac ggcggcgcag ttgtgcggta ttaacgttcg tcgagtgcgc
     3241 attcttatct ttaccctttc gggattatta gcggcggtga ccggcatttt gctggcggca
     3301 cgcctcggtt ccggtaacgc aggtgccgca aacggtctgg agtttgacgt catcgccgcg
     3361 gtcgtggtcg gcggtacggc actttccggc ggtcgcggtt ccctgttcgg tacattgctt
     3421 ggtgtgctgg tgattacgct aatcggtaac ggtctggtgc tgctcggtat taactccttt
     3481 ttccagcagg tggtacgcgg cgtcatcatc gtggtggcgg tgctggcgaa tatcttgctg
     3541 acccagcgaa gcagtaaagc gaaacgctaa accttaacgc ccctggcgcg ggtgcggcag
     3601 ggatgaaaat taatcgtatt gttaatgagg gatttatgaa aacgatgctg gcagcttatt
     3661 taccaggaaa ttcaaccgtc gatctgcggg aagttgcggt gccgacgccg gggattaacc
     3721 aggtactgat caaaatgaaa tcctccggga tttgcggaag cgatgtccac tatatctatc
     3781 atcaacaccg tgccacggcg gcggcacccg ataaaccgtt ataccaggga tttatcaacg
     3841 gtcatgaacc atgcgggcag attgtggcga tggggcaagg ctgtcgccat tttaaagagg
     3901 gtgatcgcgt gctggtgtat cacatttctg gctgtggttt ttgcccgaac tgccgccgcg
     3961 gctttcctat ctcttgtact ggcaaaggaa aagcggctta cggctggcag cgtgacggcg
     4021 gtcatgccga atacttgctg gcggaagaaa aagatctgat cctcctgccg gatgcgctta
     4081 gctacgaaga tggtgcgttt atcagttgcg gcgttggtac agcgtatgaa ggaattttgc
     4141 gcggcgaagt ttccggcagt gataacgtgc tggtggtcgg tctggggcca gtcggcatga
     4201 tggcgatgat gctggcgaaa ggtcgcggtg caaaacggat catcggcgtt gatatgctgc
     4261 cggaacgtct ggcgatggca aaacagttag gggtgatgga tcacggctat ttagcaacca
     4321 ccgaaggtct gccgcagatt atcgccgaac tcacccacgg tggcgcggat gttgcgctcg
     4381 attgttctgg taatgccgca ggtcgcttgc tggcactgcg atccaccgct gattggggac
     4441 gggtggttta catcggagaa accggaaaag tggagttcga ggtcagcgcc gatctgatgc
     4501 accatcaacg gcggattatc ggctcctggg tgaccagtct gttccatatg gaaaaatgcg
     4561 cccatgatct gacggactgg aaactgtggc cgcgtaacgc cattacccat cgcttctcgc
     4621 tggaacaggc tggagatgcc tatgcgctga tggcgagcgg caaatgcggg aaagttgtga
     4681 ttaacttccc ggattaagga gttagcggat gaccatctat accttatctc acggaccgct
     4741 aaagctggat gtctctgacc agggcggcgt aatcgaaggc ttctggcgtg acacgacgcc
     4801 gcttttacgt cctggtaaaa aaagcggtgt ggcaaccgat gcttcctgtt ttccgctggt
     4861 gccgtttgca aaccgggtga gcggcaatcg ttttgtctgg caggggcgtg agtatcaact
     4921 gcaaccgaat gttgagtggg atgcgcacta tctacacggc gatggctggc tgggcgagtg
     4981 gcaatgtgtc tcgcacagcg atgatagctt gtgtctggtg tatgaacatc gcagcggtgt
     5041 ctatcactat cgggtaagtc aggcgtttca tttaacggcg gatacgctga cggtgacgct
     5101 ctctgtcacc aatcaagggg cagagacgct gccatttggt accggctggc atccttattt
     5161 tccgttgtca ccacaaacgc ggattcaggc gcaggcgagc ggttactggc tggagcggga
     5221 gcagtggctg gcgggtgagt tttgcgagca gctaccgcag gaactggatt ttaaccagct
     5281 cgcgccgttg ccgcgccagt gggtgaacaa tggttttgcc ggatggaatg gtcaggcccg
     5341 catcgagcag ccgcaggaag gttatgccat catcatggaa acgacgccac ctgcaccgtg
     5401 ttatttcatc tttgtttccg accctgcgtt tgataaagga tatgcgtttg atttcttctg
     5461 tctggaaccg atgagccatg cgccggatga tcatcatcgc ccggaagggg gtgatctcat
     5521 tgcgctagca ccaggggaat caacaacttc agagatgtcg ttgcgggtag agtggctgta
     5581 atttattaaa tgccggataa ggcgttcacg ccgcatccgg catctttcct aacgccgatc
     5641 gagagaaatt gcccccggcc cggtaattgc caatagcaag aacgcgccag cgatactgac
     5701 attcttccag aaattaatca tatttggccc aaccgcatcg ccggtcatat cccagtaatg
     5761 gtgaccaatc accgccgtac ccagcgtgta gaaaataaac agcaccgcca gcggacgggt
     5821 gaaaaagcca agcacgatta atatcgcggc gggcacttcc ataactaccg caataatcgc
     5881 tgccagcatc ggcattggcg cgcccaacga ggccatatat tggaccgtac cgtcaaagcc
     5941 catcattttg ggaaaaccca aaataatgaa aattaagacc acggcgatac gggcaattaa
     6001 taacaaaacg gggcgggcag ctccaaaatc aaaataacgt agtgtgttca taaccaatcc
     6061 ctttgcaaga taatgtgatt taaacgtaat acacactctt gcacctcgcc acgccccagg
     6121 cgttgagata ttcgctaatt atcctggtta cagtgattta agcgcgatgt tctcatctat
     6181 cagcagtttc gcatcaaacg ttttgccgct ctggatccat ttgcgaattg ggcgaatctc
     6241 acgcccctga ttcagcgtga ccgcaccgat aagcacgccg ttttgcagat taaaccaaat
     6301 cgccttctga gtttccgggt tgccacgaca aagccag
//
LOCUS       DADMJE010000196         6329 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.199, whole genome shotgun sequence.
ACCESSION   DADMJE010000196 DADMJE010000000
VERSION     DADMJE010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6329
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.199"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..150
                     /locus_tag="JN001_003718"
     CDS             <1..150
                     /locus_tag="JN001_003718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000151243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054787.1"
                     /translation="AIMIMAYSVIGLISALKMPEVKDRDLSALEDAAEDQPRVVRAAQ
                     PSRSL"
     gene            239..1699
                     /locus_tag="JN001_003719"
     CDS             239..1699
                     /locus_tag="JN001_003719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannitol dehydrogenase family protein"
                     /protein_id="HAY9054788.1"
                     /translation="MGNNLLSAKATLPVYDRNNLAPRIVHLGFGAFHRAHQGVYADIL
                     ATEHFSDWGYYKVNLIGGEQQIADLQQQDNLYTVAEMSADAWTARVVGVVKKALHVQM
                     DGLETVLAAMCEPQIAIVSLTITEKGYFHSPATGQLMLDHPMVAADVQNPHQPKTATG
                     VIVEALARRKAAGLPAFTVMSCDNMPENGHVMRDVVTSYAKAVDVKLAQWIEDNVTFP
                     STMVDRIVPAVTEDTLAKIEQLTGVRDPAGVACEPFRQWVIEDNFVAGRPEWEKAGAE
                     LVSDVLPYEEMKLRMLNGSHSFLAYLGYLAGYQHINDCMEDEHYRYAAYGLMLQEQAP
                     TLKVQGVDLQDYANRLIERYSNPALRHRTWQIAMDGSQKLPQRMLDSVRWHLAHDSKF
                     DLLALGVAGWMRYVGGVDEQGNPIEISDPLLPVIQKAVQSSAEGKARVQSLLAIKAIF
                     GDDLPDNSLFTAKVTEAYLSLLAHGAKATVAKYSVK"
     gene            complement(1735..1938)
                     /gene="ydfZ"
                     /locus_tag="JN001_003720"
     CDS             complement(1735..1938)
                     /gene="ydfZ"
                     /locus_tag="JN001_003720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative selenium delivery protein YdfZ"
                     /protein_id="HAY9054789.1"
                     /translation="MTTYDRNRNAITTGSRVMVSGTGHTGKILSIDTEGLTAEQIRRG
                     KTVVVEGCEEKLAPLDLIRLGMN"
     gene            complement(1935..2801)
                     /locus_tag="JN001_003721"
     CDS             complement(1935..2801)
                     /locus_tag="JN001_003721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005005969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HAY9054790.1"
                     /translation="MTVETQLNPTQPVNQQIYRILRRDIVHCLIAPGTPLSEKEVSVR
                     FNVSRQPVREAFIKLAENGLIQIRPQRGSYVNKISMAQVRNGSFIRQAIECAVARRAA
                     SMITESQCYQLEQNLHQQRIAIEHKQLDDFFELDDNFHQLLTQIADCQLAWDTIENLK
                     ATVDRVRYMSFDHVSPPEMLLRQHLDIFSALQKRDGDAVERAMTQHLQEISESVARSA
                     RKTATGLAKSNSFTLIPSGMRGFSPRLTAHACIKKDVSLIKNKKYFTRQEYLYCARYV
                     GFDCKSERRKHL"
     gene            complement(2890..3636)
                     /gene="ydfG"
                     /locus_tag="JN001_003722"
     CDS             complement(2890..3636)
                     /gene="ydfG"
                     /locus_tag="JN001_003722"
                     /EC_number="1.1.1.298"
                     /EC_number="1.1.1.381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional NADP-dependent 3-hydroxy acid
                     dehydrogenase/3-hydroxypropionate dehydrogenase YdfG"
                     /protein_id="HAY9054791.1"
                     /translation="MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL
                     GDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETM
                     IDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLN
                     LRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW
                     VSTLPAHVNINTLEMMPVTQSYAGLNVHRQ"
     gene            3773..5818
                     /gene="dcp"
                     /locus_tag="JN001_003723"
     CDS             3773..5818
                     /gene="dcp"
                     /locus_tag="JN001_003723"
                     /EC_number="3.4.15.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707439.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidyl-dipeptidase Dcp"
                     /protein_id="HAY9054792.1"
                     /translation="MTTMNPFLVQSTLPYLAPHFDQIANHHYRPAFDEGMQQKRAEIA
                     AIALNPQTPDFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAEL
                     ANDIYLNGELFARVDAVWQRRESLGLDSESIRLVEVIHQRFVLAGAKLAQADKAKLKV
                     LNTEAATLTSQFNQRLLAANKSGGLVVNDIAQLAGMSEQEIALAAEAAREKGLDNKWL
                     IPLLNTTQQPALAEMRDRATREKLFIAGWTRAEKNDANDTRAIIQRLVEIRAQQAKLL
                     GFPHYAAWKIADQMAKTPEAALNFMREIVPAARQRASDELASIQAVIDKQQGGFSAQP
                     WDWAFYAEQVRREKFDLDEAQLKPYFELNTVLNEGVFWTANQLFGIKFVERFDIPVYH
                     PDVRVWEIFDHNGVGLALFYGDFFARDSKSGGAWMGNFVEQSTLNETHPVIYNVCNYQ
                     KPAAGEPALLLWDDVITLFHEFGHTLHGLFARQRYATLSGTNTPRDFVEFPSQINEHW
                     ATHPQVFARYARHYQSGAAMPDELQQKMRNASLFNKGYEMSELLSAALLDMRWHCLEE
                     NEAMQDVDDFELRALVAENMDLPAIPPRYRSSYFAHIFGGGYAAGYYAYLWTQMLADD
                     GYQWFVEQGGLTRENGQRFREAILSRGNSEDLERLYRQWRGKAPQIMPMLQHRGLNI"
     gene            complement(5863..>6329)
                     /locus_tag="JN001_003724"
     CDS             complement(5863..>6329)
                     /locus_tag="JN001_003724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HAY9054793.1"
                     /translation="NLTSALSQRLIADQLRLTTAESCTGGKLASALCAAEDTPKFYGA
                     GFVTFTDQAKMKILSVSQQSLERYSAVSEKVAAEMATGAIERADADVSIAITGYGGLE
                     GGEDGTPAGTVWFAWHIKGQTYTAVMHFAGDCETVLALAVRFAHVQLLQLLL"
BASE COUNT         1583 a         1512 c         1628 g         1606 t
ORIGIN      
        1 gccattatga tcatggcata ttcagtgatt ggtttaatct ctgcgctgaa aatgccagag
       61 gtgaaagacc gtgatttaag tgcgctggaa gacgctgcgg aagatcaacc gcgtgttgta
      121 agagctgcgc aaccttccag aagtctgtaa accctcaatc ccttctctta ccggagaggg
      181 gatttttatt catataacaa aacatatagc ttgccatatt taaatttaag gaattgttat
      241 gggaaataat ttgttatcag caaaagcgac actccctgtt tatgatcgta ataacctggc
      301 cccaagaatt gttcatttag gctttggtgc atttcaccgt gcgcatcagg gcgtgtatgc
      361 cgatattctt gctacagaac atttcagtga ctggggatat tataaggtca acttaatcgg
      421 cggcgaacag caaattgccg atttacaaca gcaagataat ctttataccg ttgcggaaat
      481 gtcggccgat gcgtggacgg ctcgcgtcgt tggcgtcgtt aaaaaagcct tgcacgtaca
      541 gatggatggc ttagaaaccg tgttggctgc gatgtgtgaa ccgcaaatcg cgattgtctc
      601 tctgacaatc accgaaaaag ggtatttcca ctctccggcg accggacagt taatgctcga
      661 tcacccgatg gtcgctgccg acgtgcaaaa tccccaccag ccgaaaacag caacaggggt
      721 gattgttgag gcgctggccc gccgtaaagc ggcaggactt cccgcattta ccgtcatgtc
      781 atgtgacaac atgccagaaa acggtcatgt tatgcgtgac gttgtcactt catacgcgaa
      841 agctgttgat gtaaaactgg cacaatggat cgaagataac gtgactttcc catcaacaat
      901 ggtggaccgt attgtgcccg cagtgacaga ggatacgctg gcgaaaatcg aacaacttac
      961 cggtgtgcgc gatcctgcgg gcgttgcctg tgaacctttc cgccagtggg taatagaaga
     1021 taactttgtt gccggacgtc cagaatggga aaaagcggga gccgaactgg ttagtgatgt
     1081 gctgccttat gaagagatga agttgcgcat gctcaacggc agtcattcat tcctggcgta
     1141 tttgggttat cttgccggat atcagcacat taatgactgc atggaagatg aacattatcg
     1201 ttatgcggcg tatggcttga tgttgcagga acaagcgccg acgctgaaag tgcagggcgt
     1261 tgatttgcaa gattacgcta accgattaat tgaacgctat agcaatccgg cgttacgtca
     1321 tcgaacctgg cagattgcga tggatggtag ccagaaattg ccacagcgga tgttggattc
     1381 tgttcgctgg catctggcgc atgacagcaa gttcgatctg ctggcgctgg gcgtcgcggg
     1441 ttggatgcgt tatgtcggtg gtgttgatga acagggaaat ccgatagaaa tcagtgaccc
     1501 actgttacct gttattcaga aggctgtaca aagtagtgcc gaagggaaag cgcgcgtcca
     1561 gtcattgctg gcgattaagg caatctttgg tgatgatttg ccagacaata gcttgtttac
     1621 tgcaaaagtg acggaagcgt acttgtcttt attagcgcat ggcgcgaaag cgaccgtggc
     1681 gaaatattcc gtgaagtaaa aaaagcaatg ccgccatcgg cggcattcac acacttagtt
     1741 catgccgaga cgaatcaggt ccagaggtgc cagtttctct tcacaacctt caacaactac
     1801 ggtttttccg cggcggattt gctcagcggt cagaccttca gtatcaatcg acaggatctt
     1861 gccagtgtga ccggtgccgc taaccataac acggctgcca gtggtgattg cgttacggtt
     1921 acgatcgtag gtcgtcatag gtgttttctc ctttctgatt tacagtcgaa gcccacgtaa
     1981 cgggcgcaat ataaatactc ctgtcgagtg aaatattttt tgtttttgat caagctcaca
     2041 tcttttttga tgcatgcatg agccgtaagg cggggggaaa agcctctcat cccggatggg
     2101 atgagagtaa atgaattact cttcgctaaa ccagtcgctg ttttcctggc ggatctggcc
     2161 acggattcgc tgatttcctg caaatgttgc gtcattgcac gttctaccgc atcgccatca
     2221 cgtttttgca gggcagagaa aatatcaaga tgctggcgta acagcatttc tggtggagaa
     2281 acatggtcga aactcatata gcgcacgcga tcaacggtcg ctttcaggtt ctcaatggta
     2341 tcccacgcca gttgacagtc ggcaatctgc gtcaggagtt gatggaagtt gtcatcaagt
     2401 tcaaaaaaat catccagttg cttgtgctca atggcaatgc gttgctggtg aagattttgt
     2461 tccagttggt agcactggct ttcggtaatc atgctcgccg cccgacgcgc caccgcgcac
     2521 tcaatggcct gacggataaa actgccgttg cgcacctggg ccatggaaat tttgttgacg
     2581 tagctgccac gctgtggacg aatttgaatc aggccgtttt ccgccagttt aataaaggct
     2641 tcacgaaccg gctggcgtga cacattgaaa cgaacagaaa cttctttttc cgacaacggt
     2701 gtgcctggag caatcaggca atggacaatg tcgcgacgaa ggatacgata aatttgctga
     2761 ttgacaggct gtgtgggatt aagttgcgtt tcgacggtca ttcgttcttg cttgtgagtg
     2821 agttaactgc atgagtctac cacttttttg tgacaagcaa taacccggca gttacgccgg
     2881 gtataaaaat tactgacggt ggacattcag tccggcatag ctttgggtaa ccggcatcat
     2941 ttccagggta ttgatattga cgtgagcagg cagcgttgac acccaccaaa cggcttcgct
     3001 gacatcttct ggcgtcaatg caacggtatt ttgataggtt ttttccgctt taccgtcatc
     3061 gcctttaaag cggacattgg aaaactcggt gccacccacc agacccggtt cgatgtcggt
     3121 gacgcgcacc gccgtaccat gcaggtccgt acgcagattc aggctaaact gacgaacaaa
     3181 cgctttcgtc gcaccgtaaa cgttaccacc ggcataaggc cagctacctg ccgttgagcc
     3241 aatgttaata atatgaccat gattacgttc aaccataccc ggtaagacgg cgcgcgtcat
     3301 atataccagg cctttgttgt tggtatcaat catcgtttcc cagtcttcaa cgctggcttt
     3361 atgcgcaggc tccatgccca acgccaggcc ggcattattt accaggatat caatattgca
     3421 ccactcggca ggaagcgatg ccagcatctc ttcaatagcg gcgcggttgc gaacgtccag
     3481 ttgggcgatg tacagattat ctcccagttc gtcttttaac tcctgcaacc gttcctggcg
     3541 acggccagtg gcgataactt tatgcccttg ttgaataaaa cgacgagtaa tgcattcacc
     3601 aaaacctgcc gttgctccag ttactaaaac gatcatctca ctgttcctca acgcttttgt
     3661 gtgtcaataa catagcacgt gatgcttaag agcgggtaat actggtttgt aagattgcac
     3721 tccgttatca gtaagcctac gctatggaac acctcgcgtt caggagaaga aaatgacaac
     3781 aatgaatcct ttccttgtgc aaagcacact accgtatctg gctccccatt ttgatcaaat
     3841 tgccaatcat cactatcgcc cggcattcga tgagggaatg cagcaaaagc gggcagaaat
     3901 tgctgccatc gcgcttaacc cgcaaacgcc tgatttcaac aatactattc tggcactgga
     3961 acaaagcgga gaattactta cccgcgttac cagcgtcttt tttgcgatga ctgcggcgca
     4021 taccaatgat gaattacagc gtcttgatga acagttttcc gctgaactgg cggaactggc
     4081 taatgatatc tatctgaacg gtgaattatt cgcgcgggta gatgctgtct ggcagcgccg
     4141 tgaatccctg gggcttgata gtgaatccat ccgcctggtg gaggtgattc atcaacgttt
     4201 tgtccttgcc ggagccaaac ttgcgcaagc tgataaagca aaattaaaag tactgaatac
     4261 agaagctgcg accctgacca gccagtttaa ccagcgatta ctggcagcaa ataaatccgg
     4321 cggtctggtt gtgaacgata tcgcgcagct ggcaggaatg agtgagcaag agattgcgct
     4381 ggcggcagag gcggctcgcg agaaaggtct ggataacaaa tggctgattc cgctgctgaa
     4441 taccacccaa caaccggcgc ttgccgagat gcgcgatcgt gcgacgcgtg aaaaactgtt
     4501 tattgcgggc tggacgcgag cggaaaaaaa tgatgccaat gatacccgcg ctatcattca
     4561 acgtctggta gagattcgcg cacagcaggc gaaactgctt ggttttcctc attatgccgc
     4621 atggaaaatc gccgatcaga tggcaaaaac gccagaagca gcactcaact ttatgcggga
     4681 aattgttcca gcggcgcgtc aacgtgctag cgatgaatta gcctccatac aggcggttat
     4741 cgataagcag caaggcgggt ttagcgcgca gccgtgggac tgggcatttt atgccgaaca
     4801 ggtacggcgg gagaaatttg atcttgatga ggcgcagctc aagccatatt ttgaattaaa
     4861 cacggtgttg aatgaaggtg tattctggac cgcgaatcag ctcttcggta ttaagtttgt
     4921 cgaacgtttt gatattcctg tctaccatcc tgacgttcgt gtgtgggaaa tttttgatca
     4981 taatggcgtg ggactggcgt tattttacgg tgatttcttc gcccgtgatt caaaaagcgg
     5041 cggtgcatgg atgggcaatt ttgttgagca atcaacgctt aatgaaacgc atccggtaat
     5101 ttataacgtt tgcaattatc agaaacccgc tgccggtgag cctgcgttgt tactctggga
     5161 tgatgtcata accttattcc atgaatttgg tcatacgctg cacggccttt ttgcccgcca
     5221 gcgttatgcc acgctttccg gcaccaacac gccgcgtgat tttgtcgaat ttccgtcgca
     5281 aatcaacgaa cactgggcaa cgcatccgca ggtattcgct cgctacgccc ggcattatca
     5341 gagcggggca gcaatgcctg acgaactgca acagaaaatg cgtaatgcca gcctgttcaa
     5401 caaagggtat gagatgagcg aactgcttag cgccgcactt ctcgatatgc gctggcattg
     5461 cctggaagaa aacgaagcaa tgcaggatgt cgatgatttt gaattgcggg cgctggtggc
     5521 ggaaaatatg gatcttcctg ctataccgcc acgctatcgc agcagttatt tcgcccatat
     5581 ttttggtggc ggatatgctg caggttatta cgcttatctg tggacgcaaa tgttggccga
     5641 tgatgggtac cagtggtttg ttgagcaggg cggattaacg cgtgaaaatg ggcagcgttt
     5701 tcgcgaggcg atcctttcca gaggtaacag cgaagatctg gaacgcctgt atcgacaatg
     5761 gcgcggtaag gctcctcaga ttatgccgat gctgcaacat cgtggcttga atatataaac
     5821 accaccaatg gctggcctgg agatatcgcc aggccagcct ggttatagca gtaattgcag
     5881 cagctggacg tgggcaaacc tcaccgctaa agctaatacc gtttcgcagt cgccagcaaa
     5941 atgcataacc gcagtgtagg tctggccttt aatatgccac gcgaaccaga cggtacccgc
     6001 tggcgtacca tcttcaccgc cctccagtcc gccgtagccg gtaatggcaa tactgacatc
     6061 agcatccgca cgctctatgg cacctgttgc catttctgct gccactttct cactcaccgc
     6121 agaatatcgt tcaagagatt gctggcttac gctgaggatt ttcatctttg cctgatcggt
     6181 gaaagtaaca aagcctgcac cgtaaaattt gggtgtatct tcagctgcac acagggcgct
     6241 agccaactta ccgccggtgc atgattcggc ggtagttaag cgtaattgat ccgcgataag
     6301 tctttgactc aacgcggatg tcaggtttt
//
LOCUS       DADMJE010000197         6317 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.200, whole genome shotgun sequence.
ACCESSION   DADMJE010000197 DADMJE010000000
VERSION     DADMJE010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6317)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6317)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6317
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.200"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            285..626
                     /gene="raiA"
                     /locus_tag="JN001_003725"
     CDS             285..626
                     /gene="raiA"
                     /locus_tag="JN001_003725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HAY9054794.1"
                     /translation="MTMNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKE
                     PQGFVADATINTPNGVLVASGKHEDMYTAINELINKLERQLNKLQHKGEARRAATSVK
                     DANFVEEVEEE"
     gene            730..777
                     /locus_tag="JN001_003726"
     CDS             730..777
                     /locus_tag="JN001_003726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054795.1"
                     /translation="MKHTPFFFAFFFTFP"
     gene            877..2037
                     /gene="pheA"
                     /locus_tag="JN001_003727"
     CDS             877..2037
                     /gene="pheA"
                     /locus_tag="JN001_003727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydratase"
                     /protein_id="HAY9054796.1"
                     /translation="MTSENPLLALREKISALDEKLLALLAERRELAVEVGKAKLLSHR
                     PVRDIDRERDLLERLITLGKAHHLDAHYITRLFQLIIEDSVLTQQALLQQHLNKINPH
                     SARIAFLGPKGSYSHLAARQYAARHFEQFIESGCAKFADIFNQVETGQADYAVVPIEN
                     TSSGAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSK
                     FLNRYPHWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQQQN
                     FTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIH
                     GNPWEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT"
     gene            complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JN001_003728"
     CDS             complement(2080..3201)
                     /gene="tyrA"
                     /locus_tag="JN001_003728"
                     /EC_number="1.3.1.12"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional chorismate mutase/prephenate
                     dehydrogenase"
                     /protein_id="HAY9054797.1"
                     /translation="MVAELTALRDQIDEVDKALLNLLAKRLELVAEVGEVKSRFGLPI
                     YVPEREASMLASRRAEAEALGVPPDLIEDVLRRVMRESYSSENDKGFKTLCPSLRPVV
                     IVGGGGQMGRLFEKMLTLSGYQVRILEQHDWDRAADIVADAGMVIVSVPIHVTEQVIG
                     KLPPLPKDCILVDLASVKNGPLQAMLAAHDGPVLGLHPMFGPDSGSLAKQVVVWCDGR
                     KPEAYQWFLEQIQVWGARLHRISAVEHDQNMAFIQALRHFATFAYGLHLAEENVQLEQ
                     LLALSSPIYRLELAMVGRLFAQDPQLYADIIMSSERNLALIKRYYKRFGEAIELLKQG
                     DKQAFIDSFRKVEHWFGDYAQRFQSESRVLLRQANDNRQ"
     gene            complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JN001_003729"
     CDS             complement(3212..4282)
                     /gene="aroF"
                     /locus_tag="JN001_003729"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase AroF"
                     /protein_id="HAY9054798.1"
                     /translation="MQKDALNNVHITDEQVLMTPEQLKAAFPLSLQQEAQIADSRKTI
                     SDIIAGRDPRLLVVCGPCSIHDLETALEYARRFKALAAEVSDSLYLVMRVYFEKPRTT
                     VGWKGLINDPHMDGSFDVEAGLQIARKLLLELVNMGLPLATEALDPNSPQYLGDLFSW
                     SAIGARTTESQTHREMASGLSMPVGFKNGTDGSLATAINAMRAAAQPHRFVGINQAGQ
                     VALLQTQGNPDGHVILRGGKAPNYSPADVAQCEKEMEQAGLRPSLMVDCSHGNSNKDY
                     RRQPAVAESVVAQIKDGNRSIIGLMIESNIHEGNQSSEQPRSEMKYGVSVTDACISWE
                     MTDALLREIHQDLNGQLTARVA"
     gene            4490..4855
                     /locus_tag="JN001_003730"
     CDS             4490..4855
                     /locus_tag="JN001_003730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417093.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2799 domain-containing protein"
                     /protein_id="HAY9054799.1"
                     /translation="MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISG
                     SAIKDDDAFGDSQADRGLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVESASQ
                     LHEVWQKGADENASTIRLN"
     gene            5005..5523
                     /locus_tag="JN001_003731"
     CDS             5005..5523
                     /locus_tag="JN001_003731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfiR family protein"
                     /protein_id="HAY9054800.1"
                     /translation="MRFSHRLFLLLILLLTGAPILAQEPSDVAKNVRMMVSGIVSYTR
                     WPALSGPPKLCIFSSSRFSTALQENAATSLPYLPVIIHTQQEAMISGCNGFYFGNESP
                     TFQMELTEQYPSKALLLIAKQNTECIIGSAFCLIIHNNDVRFAVNLDALSRSGVKVNP
                     DVLMLARKKNDG"
     gene            5513..>6317
                     /gene="dgcN"
                     /locus_tag="JN001_003732"
     CDS             5513..>6317
                     /gene="dgcN"
                     /locus_tag="JN001_003732"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcN"
                     /protein_id="HAY9054801.1"
                     /translation="MMDNDNSLNKRPTFKRALRNISMTSIFITMMLIWLLLSVTSVLT
                     LKQYAQKNLALTAATMTYSLEAAVVFADGPAATETLAALGQQGQFSTAEVRDKQQNIL
                     ASWHYTRKDPGDTFSNFISHWLFPAPIIQPIRHNGETIGEVRLTARDSSISHFIWFSL
                     AVLTGCILLASGIAITLTRHLHNGLVEALKNITDVVHDVRSNRNFSRRVSEERIAEFH
                     RFALDFNSLLDEMEEWQLRLQAKNAQLLRTALHDPLTGLANRAAFRSGIN"
BASE COUNT         1719 a         1612 c         1419 g         1567 t
ORIGIN      
        1 aaaaagagcc agtcagttgc ttaactgact ggcattacag cccttgagct gccgtttttt
       61 tattctgtta gttgtgaaac tgaagcgatt tagtcactat cgatctcatc aaatatggct
      121 cgctttgaga tattcctcaa gtaaaaaaac acctcttcct gcgatttctc acaaaaaaga
      181 ttcgttgaca aaaagtgaca aaattatgag attcccatca cacattttga catcaggaac
      241 ggtatgctga attcaccaag acgggaagac aagaggtaaa atttatgaca atgaacatta
      301 ccagcaaaca aatggaaatt actccggcca tccgccaaca tgtcgcagac cgtctcgcca
      361 aactggaaaa atggcaaaca catctgatta atccacatat cattctgtcc aaagagccac
      421 aagggtttgt tgctgacgcc acaatcaata cacctaacgg cgttctggtt gccagtggta
      481 aacatgaaga tatgtacact gcaattaacg aattgatcaa caagctggaa cggcagctca
      541 ataaactgca gcacaaaggc gaagcacgtc gtgccgcaac atcggtgaaa gacgccaact
      601 tcgtcgaaga agttgaagaa gagtagtcct ttatattgag tgtatcgcca acgcgccttc
      661 gggcgcgttt tttgttgaca gcgtgaaaac agtacgggta ctgtactaaa gtcacttaag
      721 gaaacaaaca tgaaacacac accgtttttc ttcgcattct tttttacctt cccctgaatg
      781 ggaggcgttt cgtcgtgtga aacagaatgc gaagacgaac aataaggcct cccaaaccgg
      841 ggggcctttt ttattgataa caaaaaaggc aacactatga catcggaaaa tccattactg
      901 gcgctgcgag agaaaatcag cgcgctggat gaaaaattat tagcattact ggcagagcgg
      961 cgcgaactgg ccgtcgaggt gggaaaagcc aaactgctct cgcatcgccc ggtacgagat
     1021 attgatcgtg aacgcgattt actggaaaga ttaattacgc tcggtaaagc gcaccatctg
     1081 gacgcccatt acattactcg cctgttccag ctcatcattg aagattccgt attaactcag
     1141 caggctttgc tccagcaaca tctcaataaa attaatccgc actcagcacg catcgctttt
     1201 ctcggcccca aaggttctta ttcccatctt gcggcgcgcc agtatgctgc ccgtcacttt
     1261 gagcaattca ttgaaagtgg ctgcgccaaa tttgccgata tttttaatca ggtggaaacc
     1321 ggccaggccg actatgccgt cgtaccgatt gaaaatacca gctccggtgc cataaacgac
     1381 gtttacgatc tgctgcaaca taccagcttg tcgattgttg gcgagatgac gttaactatc
     1441 gaccattgtt tgttggtctc cggcacgact gatttatcca ccattaatac ggtctacagc
     1501 catccgcagc cattccagca atgcagcaaa ttccttaatc gttatcctca ctggaagatt
     1561 gaatataccg aaagtacgtc agcggcaatg gaaaaggttg cacaggcaaa atcaccgcat
     1621 gttgctgcgt tgggaagcga agctggcggc actttgtacg gtttgcaggt actggagcgt
     1681 attgaagcga atcagcaaca aaacttcacc cgatttgtgg tgttggcacg taaagccatt
     1741 aacgtgtctg accaggttcc ggcgaaaacg acgttgttaa tggcgaccgg gcaacaagcc
     1801 ggtgcgctgg ttgaagcgtt gctggtgctg cgcaaccaca atctgattat gacccgtctg
     1861 gaatcacgcc cgattcacgg taatccatgg gaagagatgt tttatctgga tattcaggcc
     1921 aatcttgaat cagcggaaat gcaaaaagca ttgaaagagt taggtgaaat tacccgttca
     1981 atgaaggtat tgggctgtta cccaagtgag aacgtagtgc ctgttgatcc aacctgatga
     2041 aaaggtgccg gatgatgtga atcatccggc actggattat tactggcggt tgtcattcgc
     2101 ctgacgcaat aacacgcggc tttcactctg aaaacgctgt gcgtaatcgc cgaaccagtg
     2161 ctccaccttg cggaaactgt caataaacgc ctgcttatcg ccctgcttca gcaactcaat
     2221 cgcctcgccg aaacgcttat agtaacgttt gattaacgcc agattacgct ctgacgacat
     2281 aataatgtcg gcataaagct gcggatcctg agcaaacagt cgcccgacca tcgccagctc
     2341 aaggcggtaa atcggcgaag agagcgccag aagttgctca agctgaacat tttcttctgc
     2401 cagatgcagc ccataagcaa aagtagcaaa gtggcgcaga gcctgaataa acgccatatt
     2461 ctgatcgtgc tcgacagcgc taatacgatg cagccgagcg ccccagacct gaatttgctc
     2521 cagaaaccat tggtatgctt ccggcttacg tccatcacac cagaccacaa cttgctttgc
     2581 caggctaccg ctgtccgggc cgaacatcgg gtgtaacccc agtaccgggc catcgtgcgc
     2641 cgccagcatg gcctgtaatg gtccattttt cactgatgcc agatcaacca gaatacaatc
     2701 tttcggtaaa ggcggtaatt tgccgataac ttgctcagta acgtggattg gcacactaac
     2761 aatcaccatt ccggcatcgg caacaatatc agccgctcga tcccagtcat gttgctccag
     2821 aatccgcacc tgataacccg agagtgtcag catcttctcg aacaggcgtc ccatctgacc
     2881 gccaccgccg acgataacca ccggacgcag tgacggacaa agtgttttaa atcctttgtc
     2941 gttttcactg gagtaagatt cacgcatcac ccgacgcaaa acatcctcaa tcagatctgg
     3001 cggtaccccc agagcttccg cctctgcacg acgcgaggcc aacatagatg cctcgcgctc
     3061 cggaacataa ataggcagtc caaagcggct tttcacctcg cccacttcag caaccagttc
     3121 cagacgcttc gctaataaat tcagcagcgc tttatcgact tcatcaattt gatcgcgtaa
     3181 tgcggtcaat tcagcaacca taataaacct cttaagccac gcgagccgtc agctgcccgt
     3241 tcagatcctg atgaatttca cgcagcaagg catcggtcat ttcccagcta atgcaggcat
     3301 cggttacgga tacaccgtat ttcatttcac tgcgcggttg ctcagaagac tgattgccct
     3361 cgtggatatt actttcgatc atcagaccaa taattgagcg attgccatct ttgatttgag
     3421 caaccacgga ttctgccacc gcaggctgac ggcgataatc tttattggaa ttaccgtggc
     3481 tgcaatctac catcagagac gggcgcagtc ccgcctgttc catctctttt tcacattgcg
     3541 caacatccgc agggctatag ttcggcgctt taccaccgcg caggatgaca tgcccgtccg
     3601 gattcccctg agtttgtagc aacgcaacct gccctgcctg gttaatgcca acaaaacggt
     3661 gcggctgggc ggcggcgcgc atagcgttaa ttgctgttgc cagactgccg tcggtgccgt
     3721 ttttaaaacc aaccggcatg gaaagcccgg aggccatttc acggtgagtt tgcgattccg
     3781 ttgtacgagc accaattgct gaccagctaa acagatcgcc caggtattgc gggctattcg
     3841 gatctaacgc ttccgtcgcc agtggcagtc ccatattcac cagctcaagc agcaatttac
     3901 gcgcgatctg cagcccggct tctacatcaa aagagccatc catatgggga tcgttaatta
     3961 accctttcca gccgacagtg gtacggggtt tttcaaaata gacgcgcatt accagataga
     4021 ggctatcgct gacctctgcg gcaagggctt taaatcgacg agcatattcc agagcagttt
     4081 ccagatcatg aatggaacaa ggaccacaaa ctaccagcag acgaggatcg cgcccggcga
     4141 taatatctga aatggtttta cgcgagtcag caatctgggc ttcttgttgc aggctcaatg
     4201 gaaaagcggc cttcagttgt tccggagtca ttaaaacctg ttcgtcggta atatgtacgt
     4261 tattcagcgc gtctttttgc atgatggcga tcctgtttat gctcgtttgc gatagttgat
     4321 cctcagcgag gatgacgtaa cgataacaca taaagtaaag ttttcaatcc atatttcgta
     4381 cgcttttctt tacacgaaca atttactcgc gctttgatgc ttatttcgta caaataaatt
     4441 tacaccccct ttaaaaacaa tccgctatgc tttgaaaaag gagaaagaaa tgatgaaaaa
     4501 gtttatcgcc cccttattgg ctttactggt tagcggatgt cagattgatc cttatactca
     4561 cgcgccaacc ttgaccagca ccgactggta tgatgtcggt atggaagatg cgatatcggg
     4621 cagcgccata aaagatgacg atgcatttgg cgattcacag gcggatcgcg gtctatacct
     4681 taaaggatat gccgaaggac aaaagaaaac ttgccagacc gattttactt atgcccgggg
     4741 actttccggt aaaagctttc ctgccagctg taacaatgtt gaaagtgcca gccaactgca
     4801 tgaagtatgg caaaaagggg ctgatgaaaa tgccagcaca atacgattaa attaattaaa
     4861 accccacaaa taaattaaac ataagatttt actcattgtg ttttatttct cacattgatg
     4921 acgatcgcat gaaaaaatga tattttaatg agcattctga aaaaatatcg atgcatttcg
     4981 agcgaagaag gtggggatcc ctgaatgcgt ttttctcacc gactgttctt acttctgatt
     5041 ctcctgctga cgggagcacc aatactcgct caggagcctt ctgacgttgc gaaaaacgtg
     5101 cgtatgatgg tttccggtat tgtcagttac acccgctggc ctgcgctatc agggccacca
     5161 aagttatgta tcttttcatc ttcacgtttt agtaccgccc tacaagagaa tgccgcgaca
     5221 tctttgcctt atctgcctgt catcattcac actcaacaag aggcgatgat ttcaggctgc
     5281 aatggttttt attttggcaa cgagtcaccg acattccaga tggaattaac cgaacaatat
     5341 ccgtcaaagg cgttattatt aattgccaaa caaaataccg agtgcattat tggtagcgcc
     5401 ttttgtctga tcatccacaa taatgacgtc agatttgccg taaacctgga tgccttatcg
     5461 cgtagcggtg taaaggtcaa cccggatgtc ttaatgctcg cacggaagaa aaatgatgga
     5521 taacgataat tctcttaata agcgccccac gtttaaaaga gcattacgca acatcagtat
     5581 gaccagcata tttatcacta tgatgctgat ctggttgctg ctttccgtga cctcggtgct
     5641 gaccctgaaa cagtacgcgc aaaaaaacct ggcactgaca gcagcaacaa tgacttacag
     5701 tctggaagca gctgtcgttt ttgccgatgg ccctgcagca actgaaacac tggcagcgct
     5761 gggccagcaa gggcaatttt caactgcaga agtacgtgat aagcagcaaa atattctggc
     5821 gtcctggcat tacacccgta aggatccagg cgatactttc agcaatttca taagccactg
     5881 gctcttcccc gcccccatca ttcagccgat tcgtcacaat ggtgaaacca ttggcgaagt
     5941 acgcttaacc gctcgcgaca gttcaatcag ccattttatc tggttttcgc tcgccgtact
     6001 gaccggttgt attctgctgg catcaggcat cgcaattacc ctcacccgcc atttgcacaa
     6061 tggcctagtg gaagcgctga aaaatatcac cgatgtcgta catgatgtgc gttccaaccg
     6121 caatttttcc cgacgagttt ctgaagaacg tatcgctgag tttcaccgct tcgctctcga
     6181 cttcaacagt ctgctggatg aaatggaaga gtggcagctt cgtttacagg ccaaaaatgc
     6241 gcagcttctg cgtaccgcgc tacatgaccc attaaccggg ctggctaacc gcgcagcgtt
     6301 tcgtagcggc atcaata
//
LOCUS       DADMJE010000198         6292 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.201, whole genome shotgun sequence.
ACCESSION   DADMJE010000198 DADMJE010000000
VERSION     DADMJE010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6292)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6292)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6292
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.201"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(85..621)
                     /gene="ssb1"
                     /locus_tag="JN001_003733"
     CDS             complement(85..621)
                     /gene="ssb1"
                     /locus_tag="JN001_003733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005224583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein SSB1"
                     /protein_id="HAY9054802.1"
                     /translation="MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDK
                     ATGEMKEQTEWHRVVLFGKLAEVASEYLRKGSQVYIEGQLRTRKWTDQSGQDRYTTEV
                     VVNVGGTMQMLGGRQGGGAPAGGNIGGGQPQGGWGQPQQPQGGNQFSGGAQSRPQQSA
                     PAAPSNEPPMDFDDDIPF"
     gene            875..3697
                     /gene="uvrA"
                     /locus_tag="JN001_003734"
     CDS             875..3697
                     /gene="uvrA"
                     /locus_tag="JN001_003734"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HAY9054803.1"
                     /translation="MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDT
                     LYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTIT
                     EIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKG
                     EHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLA
                     ESFETALELSGGTAVVADMDDPKAEELLFSANFACPICGYSMRELEPRLFSFNNPAGA
                     CPTCDGLGVQQYFDPDRVIQNPELSLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEA
                     PWGSLSANVHKVVLYGSGKENIEFKYMNDRGDTSIRRHPFEGVLHNMERRYKETESSA
                     VREELAKFISNRPCASCEGTRLRREARHVYVENTPLPAISDMSIGHAMEFFNNLKLAG
                     QRAKIAEKILKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQIGAGLVGV
                     MYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDAIRAADHVIDIGPGAGV
                     HGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEVPKKRVPANPEKVLKLTGARGNNLK
                     DVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQRQLNGATIAEPAPYRDIQGLEHF
                     DKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPESRARGYTPGRFSFNVRGGRC
                     EACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEARE
                     FFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTGQTLYIL
                     DEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADWIVDLGPEGGSGGGE
                     ILVSGTPETVAECEASHTARFLKPML"
     gene            complement(3732..4088)
                     /locus_tag="JN001_003735"
     CDS             complement(3732..4088)
                     /locus_tag="JN001_003735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HAY9054804.1"
                     /translation="MTISELLQYCMAKLGAEQSVHNDWKATQIKVEDVLFAMVKEVEN
                     RPAVSLKTSPELAELLRQQHSDVRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQ
                     AVNLLPEEKRKLLVQL"
     gene            complement(4092..4508)
                     /locus_tag="JN001_003736"
     CDS             complement(4092..4508)
                     /locus_tag="JN001_003736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HAY9054805.1"
                     /translation="MWYQKTLTLSAKSRGFHLVTDEILNQLADMPRVNIGLLHLLLQH
                     TSASLTLNENCDPTVRHDMERFFLRTVPDNGNYEHDYEGADDMPSHIKSSMQGTSLVL
                     PLHKGRIQTGTWQGIWLGEHRIHGGSRRIIATLQGE"
     gene            complement(4619..5332)
                     /locus_tag="JN001_003737"
     CDS             complement(4619..5332)
                     /locus_tag="JN001_003737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B acid phosphatase"
                     /protein_id="HAY9054806.1"
                     /translation="MRKITQAISAVCLLFALNSSAVALASSPSPLNPGTNVARLAEQA
                     PIHWVSVAQIENSLAGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPESEDYLKNPVFW
                     EKMNNGWDEFSIPKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPAT
                     NMNPVIFAGDKPGQNTKSQWLQDKNIRIFYGDSDNDITAARDVGARGIRILRASNSTY
                     KPLPQAGAFGEEVIVNSEY"
     gene            5694..6236
                     /locus_tag="JN001_003738"
     CDS             5694..6236
                     /locus_tag="JN001_003738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005059113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054807.1"
                     /translation="MVINFITRDGDDDMNISYMNSNKTTSLPVELDALNNKDISYAKD
                     FSYVKDFFLYIETQLKIAKDFCRLGEEVSSSIASKVFHAFIDLVNKIRGKKDFMYICT
                     LCCFAEEVKGDYSHYRTFLFDIGNQYKVKLTQSGKKEFSLTLEFNDTIIESQKVTGNK
                     AKHILEDIEIFYRNKPDTYY"
BASE COUNT         1594 a         1554 c         1568 g         1576 t
ORIGIN      
        1 cataacggag gcttcttttt tatggctggc agatgcttta atcatccacc ttaaaacaat
       61 ataacctatt gttttaatga caaatcagaa cggaatgtca tcatcaaagt ccatcggcgg
      121 ctcgttagac ggcgctgccg gagcggactg ctgcgggcga gactgcgcgc cgccgctgaa
      181 ctgattgcca ccctgcggct gctgaggctg accccaaccg ccctgcggct gaccaccacc
      241 gatattacca cctgccggag cgccaccacc ctgacgacca cccagcatct gcatggtgcc
      301 gccaacgttc accacgactt ctgtggtgta gcgatcctga ccggattgat cggtccattt
      361 acgggtacgc agctgacctt cgatataaac ctgagaacct ttacgcagat attcgctggc
      421 cacttctgcc agtttgccga acagcacaac gcggtgccat tcagtctgtt ctttcatctc
      481 gccggtcgct ttatcacgcc aggattcgga agtagccagc gtaatgttgg caactgcgcc
      541 accatttggc atgtagcgta cttccgggtc ctgacccaga ttaccaacga gaataacctt
      601 gtttacgcct ctgctggcca tgttcgtgtc tcctgaaaaa aatcgttctg aataagtgta
      661 aacgcgcgat tgtaccatta ccaatagcgc ttttactatg ttgtgacctc ggttccggga
      721 aacaaacctg gccagacatt gttacacaac actccggata atgcattcca atactgtata
      781 ttcattcagg tcaatttgtg tcataattaa ccgtttgtga tcgccggtag caccatgcca
      841 ccgggcaaaa aagcgtttaa tccgggaaag gtgaatggat aagatcgaag ttcggggcgc
      901 ccgcacccat aatctcaaaa acatcaacct cgttatcccc cgcgacaagc tcattgtcgt
      961 gaccgggctt tcgggttctg gcaaatcctc gctcgctttc gacaccttat atgccgaagg
     1021 gcagcgccgt tacgttgaat ccctttccgc ctacgcgcgg cagtttctgt cactgatgga
     1081 aaagccggac gtcgatcata ttgaggggct ttctcctgcc atctcaattg agcagaaatc
     1141 gacgtctcat aacccgcgtt ctacggtggg gacaatcacc gaaatccacg actatttgcg
     1201 tttgttgttc gcccgcgtcg gcgaaccgcg ctgtccggac cacgacgtcc cgctggcggc
     1261 gcaaaccgtc agccagatgg tggataacgt gctgtcgcag ccggaaggca agcgtctgat
     1321 gctactcgcg ccaatcatta aagaacgcaa aggcgaacac accaaaacgc tggagaacct
     1381 ggcaagccag ggttacatcc gtgctcgtat tgatggcgaa gtctgcgatc tttccgatcc
     1441 gccgaaactg gaactgcaaa agaaacacac tattgaagtg gtggttgatc gcttcaaggt
     1501 gcgtgacgat cttacccaac gtcttgcgga gtcgtttgaa accgcgctgg agctttccgg
     1561 tggtacagcg gtagtggcgg atatggacga cccgaaagcg gaagagctgc tgttctccgc
     1621 caacttcgcc tgcccaattt gcggctacag tatgcgtgaa ctggagccac gactgttttc
     1681 gtttaacaac ccggcaggtg cctgcccaac ctgtgacggc cttggcgtac agcaatattt
     1741 cgatcctgac cgcgtgatcc aaaaccccga gctgtcactg gctggcggtg cgatccgtgg
     1801 ctgggatcgc cgcaacttct attacttcca gatgctgaaa tcgctggcag atcactataa
     1861 gttcgacgtc gaagcgccgt ggggcagcct gagcgcgaac gtgcataaag tggtgttgta
     1921 cggttctggc aaagaaaaca ttgaattcaa atacatgaac gatcgtggcg atacctccat
     1981 ccgtcgtcat ccgttcgaag gcgtgctgca caatatggag cgccgttata aagagacaga
     2041 atccagtgcg gtacgtgaag aattagccaa gtttatcagc aatcgcccat gcgccagctg
     2101 cgaagggacg cgtctgcgtc gggaagcgcg ccacgtttat gtcgagaata cgccgctgcc
     2161 tgctatctcc gacatgagca tcggtcatgc gatggaattc ttcaacaatc tcaaactagc
     2221 tggtcagcgg gcgaagattg cagaaaaaat ccttaaagag atcggcgatc gtctgaaatt
     2281 cctcgttaac gtcggcctga attacctgac actttcccgc tcggcagaaa cactttccgg
     2341 cggtgaagcc cagcgtatcc gtctggcgag ccagattggt gcgggcctgg ttggcgttat
     2401 gtatgtactg gacgagccgt ctatcggcct gcaccagcgc gataacgagc gcctgttggg
     2461 tacgcttatc catctgcgcg atctcggtaa taccgtgatt gtggtggagc atgacgaaga
     2521 cgcaattcgc gccgctgacc atgtgatcga tatcggtcct ggtgcgggtg ttcacggcgg
     2581 tgaagtggtc gcagaaggtc cgctggaagc gatcatggcg gtgcctgaat cgttgaccgg
     2641 gcagtacatg agcggtaaac gcaagattga agtgccgaag aaacgcgttc cggcgaatcc
     2701 agaaaaagtg ctgaagctga caggtgcacg cggcaacaac ctgaaggacg tgacgctcac
     2761 gctgccagtc ggtctgttta cctgcatcac aggggtttca ggttccggta aatcgacgct
     2821 gattaacgac acactgttcc cgattgccca acgccagttg aatggtgcga ccatcgccga
     2881 accggcaccg tatcgcgata ttcaggggct ggagcatttc gataaagtga tcgatatcga
     2941 ccaaagccca attggtcgta ctccacgttc taacccggcg acctataccg gcgtgtttac
     3001 acctgtgcgc gaactgtttg cgggcgtacc ggaatcccgt gcgcgtggtt atacgccagg
     3061 acgtttcagc tttaacgtcc gtggcgggcg ctgcgaagcc tgtcagggcg acggtgtgat
     3121 caaagtggag atgcacttcc tgccggatat ctacgtgccg tgcgatcagt gcaaaggtaa
     3181 acgctataac cgtgaaacgc tggaaattaa gtacaaaggc aaaaccatcc acgaagtgct
     3241 ggatatgacc atcgaagagg cgcgtgagtt ctttgatgcg gtgccagctc tggcgcgtaa
     3301 gctgcaaacg ttgatggacg ttggtctgac gtacattcgc ctggggcagt ccgcaaccac
     3361 actttctggt ggtgaagccc agcgcgtgaa gctggcgcgt gagctgtcaa aacgcggcac
     3421 cgggcagacg ctgtatattc tcgacgagcc gaccaccggt ctgcacttcg ccgatattca
     3481 gcaactcctc gacgtgctgc ataaactgcg cgatcagggc aataccattg tggtgattga
     3541 gcacaatctc gacgtgatca aaaccgctga ctggattgtc gacctgggac cagaaggcgg
     3601 cagtggcggc ggcgaaatcc tcgtctccgg tacgccagaa accgtcgcgg agtgcgaagc
     3661 ttcgcatacg gcacgcttcc tcaagccgat gctgtaatcg ttaaggccgc tttctgagcg
     3721 gccttttcct ttcagagttg taccagcaat ttacgctttt cttccggtag taaattcact
     3781 gcctgctgat aagacgcatc caccagataa tagatttgcg aatccggcag cgaaccgtcg
     3841 agatacacgg tgctccagtg cgctttattc agatggcggc taggacgcac atcgctgtgc
     3901 tgctgacgta gcagctccgc cagctccggg ctggttttca gcgaaacagc tgggcgattt
     3961 tctacttctt tcaccatcgc aaacagtaca tcttccactt tgatctgcgt cgctttccag
     4021 tcgttatgca cgctctgttc tgcgcctagt tttgccatgc aatattgtag caactccgaa
     4081 atggtcattt tttactcccc ttgtagtgtc gcgatgatgc gacgcgatcc gccgtggatg
     4141 cgatgttccc ccagccagat gccttgccag gtgccggtct gaatacgccc tttatgtaac
     4201 ggcaatacaa gcgatgttcc ctgcattgag gatttgatat gagaaggcat atcgtctgct
     4261 ccctcatagt catgctcata atttccgttg tcgggaacgg tgcggaggaa aaaacgctcc
     4321 atgtcgtggc gtacggtggg atcgcagttc tcattaagtg tcagagaggc ggaggtatgt
     4381 tgcagcaaca gatgcagtaa gccgatgtta acgcgcggca tatcagccag ctgattcaga
     4441 atttcatccg ttaccagatg aaacccacga gatttggcgc taagcgtgag cgtcttttga
     4501 taccacatgt gctgctcctt gataaaactc tcttaatcag tttgcagcaa gacagcgaaa
     4561 ggataaaggt gtgattaaaa aaacagcatt cgggagagca tcacgctctc ccgctctgtc
     4621 agtattctga attgacgatc acctcttcac caaacgcacc cgcttgtggc aagggtttgt
     4681 aggtagagtt ggaggcgcgc agaatgcgga taccacgagc gccgacatcg cgtgcggcgg
     4741 taatatcatt atcagaatcg ccataaaaaa ttcggatatt tttatcctgc agccattgcg
     4801 attttgtatt ttgccctggt ttatcgcccg caaagatcac cggattcatg ttggtggcag
     4861 gaatatgaaa attatccgcc agcgtttttg aaaccgtttc tgttttcgtc ggactacgac
     4921 cagtcacaaa gaagatcgcg tcaccgcggc gtacatgcat atcaatcagc tggcgagcga
     4981 cctcttttgg aatgctgaat tcatcccagc cattgttcat tttttcccag aacacaggat
     5041 ttttcagata atcttcgctt tctggcgaga aggttttttt gccgcgccag aagcccgggc
     5101 tggaaaaaag taccgtgtca tcgatatcaa accccaccgc cattggcgga cgccctgcga
     5161 ggctattttc aatttgtgcg accgaaaccc aatgaattgg tgcctgttca gcaagcctgg
     5221 caacgttagt accagggtta agcggtgaag gagatgaggc cagggcaaca gcggaactgt
     5281 ttagagcgaa caataagcaa acggcactga ttgcctgtgt gatcttgcgc atatttttcc
     5341 ctaaatagtc agtatgttga aactttttat tgtgagattt gttgcaaaaa ccatctgacc
     5401 ataacgccag ctgcagggga aaggaaggat tatctgcggt ttttgtgatg aaaagcagga
     5461 tgattatatt taacccagta aatacgttcc tgtctttttt gtataaaaaa tgtttattac
     5521 tcgatgtaag gatacattaa ttttacgttt attatgatga atcctctgca aatgagcgaa
     5581 atttgataga acatttatct gctgtacgat ttaatgaact taatgataca gcattacaaa
     5641 aacaatcgaa gtttataaag atgattcctg attgaccaga accctatcct acaatggtga
     5701 ttaattttat tactcgcgat ggagatgatg atatgaatat atcatatatg aatagcaaca
     5761 aaacgacatc tttacctgtt gagctagatg cactaaataa taaagatatc tcttatgcca
     5821 aagatttttc ttatgtcaaa gatttctttt tatacataga aacacagtta aaaattgcaa
     5881 aagatttttg tagacttgga gaagaagtat caagttctat tgcaagtaaa gtttttcacg
     5941 catttattga tttagttaac aaaatcaggg gtaagaaaga ctttatgtat atttgcacgc
     6001 tttgctgttt tgccgaggag gttaaaggtg attattctca ttacaggacc tttttatttg
     6061 atattggtaa tcaatataag gttaaactta cacaaagcgg aaaaaaagag ttctctttaa
     6121 cattagaatt taacgatact ataattgaat ctcagaaagt cacaggcaat aaggcaaagc
     6181 atattcttga ggatatagaa atattctatc gtaacaaacc cgatacttat tattaaattt
     6241 aataatggtt agatgtgcag aaattattac tccacacgaa aaaataggga aa
//
LOCUS       DADMJE010000199         6051 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.202, whole genome shotgun sequence.
ACCESSION   DADMJE010000199 DADMJE010000000
VERSION     DADMJE010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6051)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6051)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6051
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.202"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(95..2197)
                     /locus_tag="JN001_003739"
     CDS             complement(95..2197)
                     /locus_tag="JN001_003739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor"
                     /protein_id="HAY9054808.1"
                     /translation="MKIFSVRQTVLPALLVLSPVVFAADEQTMIVSAAPQVVSELDTP
                     AAVSVVDGEEMRLATPRINLSESLTGVPGLQVQNRQNYAQDLQLSIRGFGSRSTYGIR
                     GIRLYVDGIPATMPDGQGQTSNIDLSSVQNVEVLRGPFSALYGNASGGVMNVTTQTGQ
                     QPPTIEASSYYGSFGSWRYGLKATGATGDGTQPGDVDYTVSTTRFTTHGYRDHSGAQK
                     NLANAKLGVRIDEASKLSLIFNSVDIKADDPGGLTKAEWKANPQQAPRAEQYDTRKTI
                     KQTQAGLRYERSLSAQDDMSVMMYAGERETTQYQSIPMAPQLNPSHAGGVITLQRHYQ
                     GIDSRWTHRGELGVPVTFTTGLNYENMSENRKGYNNFRLNSGMPEYGQKGELRRDERN
                     LMWNIDPYLQTQWQLSEKLSLDAGVRYSSVWFDSNDHYVTPGNGDDSGDASYHKWLPA
                     GSLKYAMTDAWNIYLAAGRGFETPTINELSYRADGQSGMNFGLKPSTNDTIEIGSKTR
                     IGDGLLSLALFQTDTDDEIVVDSSSGGRTTYKNAGKTRRQGAELAWDQRFAGDFRVNA
                     SWTWLDATYRSNVCNEQDCNGNRMPGIARNMGFASIGYVPEDGWYAGTEARYMGDIMA
                     DDENTAKAPSYTLVGLFTGYKYNYHNLTVDLFGRVDNLFDKEYVGSVIVNESNGRYYE
                     PSPGRNYGVGMNIAWRFE"
     gene            2439..3500
                     /locus_tag="JN001_003740"
     CDS             2439..3500
                     /locus_tag="JN001_003740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncE family protein"
                     /protein_id="HAY9054809.1"
                     /translation="MHLRHLFSSRLRGSLLLGSLLVASSFSTQAAEEMLRKAVGKGAY
                     EMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQT
                     LWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGI
                     GKESVIWVVDGENIKLKTAIQNTGKMSTGLALDSKGKRLYTTNADGELITIDTADNKI
                     LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPESLA
                     VLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ
                     KSTKQQEATQPDDVIRIAL"
     gene            complement(3613..5112)
                     /gene="ansP"
                     /locus_tag="JN001_003741"
     CDS             complement(3613..5112)
                     /gene="ansP"
                     /locus_tag="JN001_003741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310084.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-asparagine permease"
                     /protein_id="HAY9054810.1"
                     /translation="MSKHDTDTSDQHAAKRRWLNAHEEGYHKAMGNRQVQMIAIGGAI
                     GTGLFLGAGARLQMAGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFL
                     GEKAAYVAGWMYFINWAMTGIVDITAVALYMHYWGAFGGVPQWVFALAALTIVGTMNM
                     IGVKWFAEMEFWFALIKVLAIVTFLVVGTVFLGSGQPLDGNTTGFHLITDNGGFFPHG
                     LLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLFYVGSVVLLV
                     MLLPWSAYQAGQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMA
                     MGGSAPSFMAKMSRQHVPYAGILATLVVYVVGVFLNYLVPSRVFEIVLNFASLGIIAS
                     WAFIIVCQMRLRKAIKEGKAADVSFKLPGAPFTSWLTLLFLLSVLVLMAFDYPNGTYT
                     IAALPIIGILLVIGWFGVRKRVAEIHSTAPVVEEDEEKQEIVFKPETAS"
     gene            5379..5996
                     /locus_tag="JN001_003742"
     CDS             5379..5996
                     /locus_tag="JN001_003742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HAY9054811.1"
                     /translation="MIKVYGVPGWGSTISELMLTLADIPYQFVDVSGFDHEGTSRELL
                     KTLNPLCQIPTLALENDEIMTETAAIALMVLDRRPDLAPPVGRAERQQFQRLLVWLVA
                     NVYPTFTFADYPERWAPDAPEQLKKNVIEYRKSLYIWLNSQLTAEPYAFGEQLTLVDC
                     YLCTMRTWGPGHEWFQDNATNISAIADAVCQLPKLQEVLKRNEII"
BASE COUNT         1611 a         1537 c         1443 g         1460 t
ORIGIN      
        1 gtcttgctga aattatgcaa caaaatattg ctattttata ccagcaatac aatcgttaaa
       61 gtaaatgccc ggcaaatacc gggcatcaag gtaattactc aaatctccac gcaatattca
      121 tgccgacacc ataatttcgt ccgggcgaag gttcgtaata tctcccgttt gactcattga
      181 caatgacaga accaacgtat tctttatcga ataaattatc gacacgacca aataaatcca
      241 cagttaaatt gtggtaattg tatttatacc cggtgaataa gccgacgaga gtataagacg
      301 gcgcttttgc cgtattttca tcatctgcca taatatcgcc catataacgc gcttccgtgc
      361 ctgcatacca accatcttcc ggtacataac ctatcgacgc aaagcccata ttacgggcga
      421 tccctggcat ccgattaccg ttacaatcct gttcattgca aacattgctg cgataggtcg
      481 catcaagcca ggtccaggac gcgtttacgc gaaaatctcc tgcgaaacgt tgatcccatg
      541 ccagttcagc gccttgacga cgggtctttc cggcattttt gtaagtcgta cgcccaccgc
      601 tactgctatc gacaacaatt tcatcatcag tgtcggtctg aaacaatgcg agactaagca
      661 gcccatcacc aatacgcgtt ttactgccga tctcaattgt atcgttggtg gatggtttta
      721 aaccaaagtt cataccgctt tgcccatcag cacgataaga cagctcatta atcgtcggcg
      781 tttcaaaacc tcgcccggct gccagataga tattccaggc atcggtcatt gcatatttta
      841 acgaaccggc aggtagccat ttatgataac tggcatcacc gctgtcatcg ccgttacccg
      901 gagtaacgta atggtcgttg gaatcaaacc acacggagct gtagcgcacg ccagcatcca
      961 gcgacagttt ttcgctcagc tgccactgcg tctgtaaata gggatcgatg ttccacatca
     1021 gattgcgttc gtcgcgacgc aactcacctt tttgcccgta ctccggcatg ccgctattca
     1081 ggcggaagtt attgtagccc ttgcggtttt cactcatgtt ttcgtagttc aggccggtag
     1141 tgaacgtgac cggaacgccc agttcaccac ggtgtgtcca gcggctgtct atcccctggt
     1201 aatggcgttg cagggtaatc acgccgcccg catgtgacgg gttaagttgt ggtgccatgg
     1261 gtattgactg gtactgggtc gtttctcgct ctccggcata catcatcaca ctcatatcat
     1321 cttgcgcgct caggctacgc tcatagcgca acccagcctg agtttgcttg atggtttttc
     1381 gcgtgtcgta ctgttctgca cgaggcgctt gttgtggatt agccttccat tctgctttgg
     1441 ttagcccacc tgggtcatct gctttgatat ccacactatt gaaaatcaga cttaatttgc
     1501 tggcttcatc aatgcgtacg cccagtttgg cattggctaa atttttctgt gcgccactat
     1561 ggtcacgata gccgtgggtc gtaaaacgcg tggttgagac ggtgtaatcg acatcgccag
     1621 gctgtgtgcc gtctcccgtt gcgcccgttg ctttcagccc atagcgccag ctgccaaaac
     1681 tgccgtagta actactggct tcaatggttg gtggctgttg tccggtctgg gtggtgacat
     1741 tcattacccc accagacgcg ttgccataca gggcagagaa ggggccacgc agcacttcca
     1801 cattttgcac actgcttaaa tcgatgttgg atgtttgccc ttgcccgtcg ggcatggtgg
     1861 cgggaatacc gtccacatac aggcgaatac cgcgaatacc gtaagtggag cgggagccaa
     1921 atccgcgaat cgacagctgt aaatcttgcg catagttctg ccggttttgt acctgcaaac
     1981 caggcacgcc ggtcagtgat tcggacaagt taatgcgcgg tgttgccagg cgcatctcct
     2041 cgccatccac cacgcttact gctgctgggg tatccagttc tgaaaccacc tgcggtgcgg
     2101 cactgacaat catagtctgt tcatcagcgg caaaaacaac gggggaaagg acaagcagtg
     2161 cgggcaaaac ggtctgtcgg acggaaaaaa tcttcatgaa aaaagccagg ttaagaatgg
     2221 gaaaacgctg tcatggtaat aaaattgtaa acttatgcaa aacgaaacgg cacgatacgt
     2281 taattaattg agaaaattgt agtcgtaacg gcaagaaatg ctccacattt gagaaaataa
     2341 tgattaccat tcccatttat aacaagagcg tgacgatgat tacgcttagc gaagcattgt
     2401 gaagcagcaa aaatattggt tcatcaaagg gagtcgtcat gcatttacgt catctgtttt
     2461 catcgcgcct gcgtggttca ttactgttag gttcattgct tgttgcttca tcattcagta
     2521 cgcaggccgc agaagaaatg ctgcgtaaag cggtaggtaa aggtgcctac gaaatggctt
     2581 atagccagca agaaaacgcg ctgtggctcg ccacttcgca aagccgcaaa ctggataaag
     2641 gtggcgtggt ttatcgtctt gatccggtca ctctggaagt gacgcaggcg atccataacg
     2701 atctcaagcc gtttggtgcc accatcaata acacgactca gacgttgtgg tttggtaaca
     2761 ccgtaaacag cgcggtcacg gcgatagatg ccaaaacggg cgaagtgaaa ggccgtctgg
     2821 tgctggatga tcgtaagcgc acggaagagg tgcgcccgct gcaaccgcgt gagctggtag
     2881 ctgatgatgc cacgaacacc gtttacatca gtggtattgg taaagagagc gtgatttggg
     2941 tcgttgatgg cgagaatatc aaactgaaaa ccgccatcca gaacaccggt aaaatgagta
     3001 ccggtctggc gcttgatagc aaaggcaaac gtctttacac cactaacgct gacggcgaat
     3061 tgattaccat cgacaccgcc gacaataaaa tcctcagccg taaaaagctg ctggatgacg
     3121 gcaaagagca cttctttatc aacatcagcc ttgataccgc caggcagcgt gcatttatca
     3181 ccgattctaa agcggcagaa gtgttagtgg tcgatacccg taatggcaat attctggcga
     3241 aggttgcggc accggaatca ctggctgtgc tgtttaaccc cgcgcgtaat gaagcctacg
     3301 taacgcatcg tcaggcaggt aaagtcagtg tgattgacgc gaaaagctat aaagtggtga
     3361 aaacgttcga tacgccgact catccaaaca gcctggcgct gtctgccgat ggcaaaacgc
     3421 tgtatgtcag tgtgaaacaa aaatccacta aacagcagga agctacccag ccagacgatg
     3481 tgattcgtat tgcgctgtaa tagatatggc gagggtgaaa acggtgagac ttgcctgcct
     3541 tttatcacgg cgtatccggc actttcgtca gtaatctgaa tttgcccggc acgtagccgg
     3601 gcaattttgc aattaactcg ccgtttcagg cttaaacaca atttcctgtt tttcttcatc
     3661 ttcctcgacg actggcgcag tgctgtgaat ttcagcaacg cgtttgcgca caccaaacca
     3721 gcctataacc agcagaatac cgataatcgg cagcgccgcg atagtataag tcccgttcgg
     3781 gtaatcgaac gccatcagca caaggacact cagtaaaaac agtaatgtca gccaggaagt
     3841 gaagggcgcg ccaggcagtt taaaactgac atccgctgct ttgccttctt taatcgcttt
     3901 acgcaggcgc atctggcaca cgatgataaa cgcccatgaa gcgatgattc ccagcgacgc
     3961 gaagttcaac acaatctcaa atacgcgcga cggcaccaga tagttgagga atacgccgac
     4021 gacatacaca accagtgtcg ctagaatccc ggcatacggc acatgctgac gactcatttt
     4081 cgccataaaa ctcggtgcgg aaccgcccat cgccattgag cgcagaatac gtccggtgca
     4141 gtacagacct gagttcaggc tggagagggc agcggtcagc accacaatgt tcataatgct
     4201 gccgatatat ggcacaccca gtttagagaa aaacgtcacg aacggacttt gccccgcctg
     4261 atacgcgctc cacggcaata acataaccag caacaccacg gagccgacgt aaaacaggcc
     4321 aatacgccaa atcacactgt taatggcttt aggcaccatg gtctgcggat ctttacattc
     4381 tccggcagct gtacccacca tttcaatgga ggcaaaagca aacactacgc cctgaatcaa
     4441 caccagcgca ggcagcaaac cgtgggggaa gaagccgcca ttatcggtga ttaaatgaaa
     4501 gccagtggtg ttgccatcca gcggctgacc actaccgagg aacactgtac ccacgaccaa
     4561 aaaggtcaca atggcgagca ctttaataag cgcaaaccag aactccatct ccgcaaacca
     4621 tttcacaccg atcatattca tggtgccaac gatggtaagt gcagcgagcg caaagaccca
     4681 ctgcggcacg ccgccaaacg caccccagta atgcatatac agagcgacgg cggtaatatc
     4741 aacaatcccc gtcatcgccc agttgatgaa gtacatccag ccagcaacat aagcggcttt
     4801 ctcacccaaa aactcacggg cataagagac aaaactgcca ctggaagggc ggtgtagcac
     4861 cagctcaccc aatgcacgca gaataaaaaa cgaaaacaag ccacaaatta aataaaccag
     4921 tgccagtgct ggacccgcca tttgcagtcg ggctcctgca cctaaaaaca agccggtgcc
     4981 aatcgcgccg ccaatggcga tcatctgtac ctggcgattg cccatcgctt tgtgataccc
     5041 ctcttcgtgg gcattaagcc agcggcgttt cgcggcgtgt tgatctgaag tgtcggtgtc
     5101 gtgtttactc attgctctcc ctgattgctt taatgaaaaa gtcatataag ttgccatgaa
     5161 caatgtttat tcatcctggc gatgatagtt atcaccatta ttctttatgg gtataaaact
     5221 atcggcgcag catcctaccc gttatcgata tacgatgcaa aacatcccct tacaatcctg
     5281 aaggggattc atacaactga cgaaaaaatg acaaatactt ttgctggtta acctgtgtac
     5341 tgtcctacac ttaatcttta aaagattgtg aggggcatat gattaaggtg tatggcgtac
     5401 ccggatgggg ctctacaatc agtgagctga tgctaacact ggctgatatt ccttatcagt
     5461 tcgttgatgt cagtggtttt gaccacgagg gaacttcacg cgagttattg aaaaccctga
     5521 acccgttgtg tcagattccg acactggcgc tggaaaatga cgagattatg acggagacag
     5581 cggcgattgc attgatggtt ctcgatcgtc gcccggacct tgcgccaccg gttgggcgcg
     5641 ccgaacgtca gcagtttcaa cggctattgg tctggctggt tgctaatgtc tatccaacat
     5701 tcactttcgc cgattaccct gagcgttggg ctcctgacgc acctgaacag ttaaagaaga
     5761 atgttattga atatcgtaaa tcgctttata tctggctgaa ttcacaattg accgctgaac
     5821 cttatgcgtt tggtgagcaa ctaacgctgg tggactgtta tctttgcact atgcgcacat
     5881 gggggcctgg gcatgaatgg tttcaggata atgccacgaa tatcagtgcg attgctgatg
     5941 ctgtatgtca gttaccgaaa ttacaagaag tattaaaaag gaatgaaatt atttgagtgg
     6001 gataccagag gattatgtta tttattattc agtaacttta tccacaatga t
//
LOCUS       DADMJE010000200         6049 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.203, whole genome shotgun sequence.
ACCESSION   DADMJE010000200 DADMJE010000000
VERSION     DADMJE010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6049
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.203"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(24..392)
                     /locus_tag="JN001_003743"
     CDS             complement(24..392)
                     /locus_tag="JN001_003743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054812.1"
                     /translation="MNMMRIFYIGLSGVGMMFSSMASGHDAGGLQSPACGVVCDPYIC
                     VNSDGISPELTRKYLGEKAAENLQSLQGYDPSEFTFANGVFCDVKEKLCRDDRYFGVD
                     GKRSGKINQITTKMLFMCRE"
     gene            918..1613
                     /gene="minC"
                     /locus_tag="JN001_003744"
     CDS             918..1613
                     /gene="minC"
                     /locus_tag="JN001_003744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HAY9054813.1"
                     /translation="MSNTPIELKGSSFTLSVVHLHEAEPKVIHQALEDKIAQAPAFLK
                     HAPVVLNVSALEDPVNWSAMHKAVSATGLRVIGVSGCKDAQLKAEIEKMGLPILTEGK
                     EKAPRPAPAPQAPAQNTTPVTKTRLIDTPVRSGQRIYAPQCDLIVTSHVSAGAELIAD
                     GNIHVYGMMRGRALAGASGDRETQIFCTNLMAELVSIAGEYWLSDQIPAEFYGKAARL
                     QLVENALTVQPLN"
     gene            1637..2449
                     /gene="minD"
                     /locus_tag="JN001_003745"
     CDS             1637..2449
                     /gene="minD"
                     /locus_tag="JN001_003745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020801817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HAY9054814.1"
                     /translation="MARIIVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFDIGLR
                     NLDLIMGCERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREGV
                     AKVLDDLKAMDFEFIVCDSPAGIETGALMALYFADEAIITTNPEVSSVRDSDRILGIL
                     ASKSRRAENGEEPIKEHLLLTRYNPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVL
                     RASNQGEPVILDINADAGKAYADTVERLLGEERPFRFIEEEKKGFLKRLFGG"
     gene            2453..2719
                     /gene="minE"
                     /locus_tag="JN001_003746"
     CDS             2453..2719
                     /gene="minE"
                     /locus_tag="JN001_003746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HAY9054815.1"
                     /translation="MALLDFFLSRKKNTANIAKERLQIIVAERRRSDAEPHYLPQLRK
                     DILEVICKYVQIDPEMVTVQLEQKDGDISILELNVTLPEAEELK"
     gene            complement(3198..3317)
                     /locus_tag="JN001_003747"
     CDS             complement(3198..3317)
                     /locus_tag="JN001_003747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001131457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HAY9054816.1"
                     /translation="MPLSYAGYHHFIMMSLVSGEHNTPALSLQDESPGLVPAG"
     gene            complement(3278..3463)
                     /locus_tag="JN001_003748"
     CDS             complement(3278..3463)
                     /locus_tag="JN001_003748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054817.1"
                     /translation="MSRRYSSATITLVILFCRRPHCRKISVRQYYLKRVIFYPTTLQR
                     TAFKKCLFLMRDIIISS"
     gene            3564..3737
                     /locus_tag="JN001_003749"
     CDS             3564..3737
                     /locus_tag="JN001_003749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054818.1"
                     /translation="MSYSSFKIILIHVKNIIPIITATLILNYLNNSERSLVKQILIED
                     EIIVRATYLIPDI"
     gene            3799..4083
                     /locus_tag="JN001_003750"
     CDS             3799..4083
                     /locus_tag="JN001_003750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper family protein"
                     /protein_id="HAY9054819.1"
                     /translation="MADMNRTTKGALLGAGVGLLTGNGVNGVLKGAAVGAGVGAVTEK
                     GRDGKNARKGAKVGAAVGAVTGVLTGNGLEGAIKGAVIGGTGGAILGKMK"
     gene            4087..4422
                     /locus_tag="JN001_003751"
     CDS             4087..4422
                     /locus_tag="JN001_003751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YmgD family protein"
                     /protein_id="HAY9054820.1"
                     /translation="MMMKKFALLAGLFVFAPMTWAQDYNIKNGLPSETYITCAEANEM
                     AKTDSAQVAEIVAVMGNASVASRDLKIEQSPELSAKVVEKLNQVCAKDPQMLLITAID
                     DTMRAIGKK"
     gene            complement(4479..6049)
                     /locus_tag="JN001_003752"
                     /pseudo
     CDS             complement(4479..6049)
                     /locus_tag="JN001_003752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707067.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT         1661 a         1396 c         1385 g         1607 t
ORIGIN      
        1 tagaacataa tgtaaacaag gcatcactca cgacacataa ataacatctt tgtggtgatt
       61 tgattgattt ttccactccg cttaccatcc acaccaaaat aacgatcatc acgacataat
      121 ttttctttaa catcgcaaaa tacaccgtta gcgaatgtaa attcgctggg atcgtagcct
      181 tgtaatgatt gtaagttttc agcggctttt tcgccgagat atttccttgt taactctggg
      241 gaaatgccat ctgagttcac acaaatatac gggtcgcaaa caacgccgca cgccggagat
      301 tgaagtccgc cagcgtcatg tccagacgcc attgatgaga acatcatccc cacacctgac
      361 aatccgatat aaaaaatacg catcatattc atagcacatc ctgataatcc aaccgtacaa
      421 cacttatgct catttcatca tcaatccgta atcaaaaccg ctgacctgga cgagttacga
      481 tgacctgaca gaagtatcag acgtcttctg cggtttctat gattatgata gagcaattct
      541 atggcggata ttaagataac gggtatctgt tctttaatga tgctgcaaaa aatggaaagt
      601 taagaaagcc tggcgtggtg aaaaaataca cttgcctcaa tactggatat ttaaacaggt
      661 ctggagatgc tgtcacgatt agggtgcgga aaaaggaagc gtaaataaga acaatcaaaa
      721 gtacgacggc aatgggttga ttgacaaggg tattttttaa gctatgaatc agcgccattt
      781 atcacagaat agacttttac tctgaataaa tgggagggtg acttgcctca atataatcca
      841 gactataaca tgccttatag tcttcggaac atcatcgcgc gctggcgatg attaatagct
      901 aattgagtaa ggccaggatg tcaaacacgc caatcgagct taaaggcagt agcttcactt
      961 tatctgtggt tcatctgcat gaggcagaac ctaaggttat ccatcaggcg ctggaagaca
     1021 aaatcgctca ggcccccgca tttttaaaac atgcccccgt tgtactcaac gtcagtgcac
     1081 tggaagaccc ggtaaactgg tcagcgatgc ataaggcggt gtcggcaacc ggtttgcggg
     1141 ttattggcgt aagtggctgc aaagatgcgc aacttaaagc cgaaattgaa aagatggggc
     1201 tgcctatcct gacggaagga aaggaaaaag cgccgcgtcc agctcccgca ccacaggctc
     1261 cagcgcaaaa tacaacgccg gtcacaaaaa cgcgtttaat agataccccg gtgcgttccg
     1321 gtcagcgtat ttatgctcca caatgtgatc tgattgttac aagccacgtt agcgctgggg
     1381 ccgaattgat tgccgatggg aacattcatg tctatggcat gatgcgcggt cgtgcgcttg
     1441 caggggcaag tggtgaccgg gaaacgcaaa tattttgtac gaacctgatg gcggaactgg
     1501 tgtccatcgc aggtgaatac tggctgagtg atcaaatccc agcagaattt tatggcaaag
     1561 cggcgcgact gcagttagtc gaaaacgctt tgaccgttca accgttaaat tgatcccttt
     1621 ttaacaagga atttctatgg cacgcattat tgttgttact tcgggcaaag ggggggttgg
     1681 taagacaacc tccagcgcgg ccatcgccac tggtttggcc cagaagggaa agaaaactgt
     1741 cgtgatagat tttgatatcg gcctgcgtaa tctcgacctg attatgggtt gtgaacgccg
     1801 ggtcgtttac gatttcgtca acgtcattca gggcgatgca acgctaaatc aggcgttaat
     1861 taaagataag cgtactgaaa atctctatat tcttccggca tcgcaaacac gcgataaaga
     1921 tgccctcacc cgtgaagggg tcgccaaagt tcttgatgat ctgaaagcga tggattttga
     1981 atttatcgtt tgtgactccc cggcagggat tgaaaccggt gcgttaatgg cactctattt
     2041 tgcagacgaa gccattatta ccaccaaccc ggaagtctcc tcagtacgcg attctgaccg
     2101 tattttaggc attctggcgt cgaaatcacg ccgcgcagaa aatggcgaag agcctattaa
     2161 agagcacctg ctgttaacgc gctataaccc aggccgcgta agcagaggtg acatgctgag
     2221 catggaagat gtgctggaga tcctgcgcat caaactcgtc ggcgtgatcc cagaggatca
     2281 atcagtgttg cgcgcctcta accagggtga accggtcatt ctcgacatta acgccgatgc
     2341 gggtaaagcc tacgcagata ccgtagaacg tctgttggga gaagaacgtc ctttccgctt
     2401 cattgaagaa gagaagaaag gcttcctcaa acgcttgttc ggaggataag ttatggcatt
     2461 actcgatttc tttctctcgc ggaagaaaaa cacagccaac attgcaaaag aacggctgca
     2521 gattattgtt gctgaacgcc gtcgcagcga tgcagaaccg cattatctgc cgcagttgcg
     2581 taaagatatt cttgaggtca tttgtaaata cgtacaaatt gatcctgaga tggtaaccgt
     2641 acagcttgag caaaaagatg gcgatatttc tattcttgag ctgaacgtga ccttaccgga
     2701 agcagaagag ctgaaataag cccgctgtaa aaacgcattt atcttcaagg cagagtcatt
     2761 tctgccttga gtttttcatc cctctcatcc acgttgtggt aaagcggcga gtattcttgc
     2821 tgatactcct cattgctatt tccacctccc cctttacacc ttaaggctgt tcccacgcac
     2881 agaacaaaat gtttatgcct ggttgagtaa ataacctcat tgttagtgtg gatacactgg
     2941 gggatgataa ccccgcaatt tcattattca ttgttctccc ataggatgag gtttcccgcc
     3001 gtaactggcg ggcttttttt gccccagaat tttccctttt agccccctgt aaacgaaaac
     3061 tgcgccgaag cgcagtttaa tcgttgatgg tcagaacgac cagttcacga tatatactgc
     3121 gggtatcgac tgatttcgat tccatgccat tggataaatg atagtagcgt ctaagtgacc
     3181 taagctctgc tgcaacatca gcccgcaggc accagaccag gggattcatc ctgaagagac
     3241 agcgcaggtg tattgtgttc accactcacc aaagacatca tgatgaaatg atgatatccc
     3301 gcataagaaa gaggcatttt ttaaacgcag tgcgctgaag tgtagttgga taaaaaatca
     3361 ctcttttcag ataatactgt cgtacgctta tctttcgaca atgaggccgt cggcaaaata
     3421 aaatgactaa tgtaatcgtt gctgatgaat atcttctgct cacataaaaa tcacacaata
     3481 atattgataa atcagattat cttaccttta caacattgcg ttaacagtca atgacacttc
     3541 ttgaataaaa atattgctaa tcaatgagtt attcctcatt taagattatt ctcattcacg
     3601 taaaaaacat aattcctatc atcacagcca cgctcatttt gaattatctg aataatagcg
     3661 agcgttcttt agttaagcag atcttaattg aagacgaaat tattgtgcgt gcaacttact
     3721 taataccgga catctaagtt gaagaaaaaa atacttgcct tcgggcttat ctcagcattg
     3781 ttctgctcca cgccagcgat ggcggatatg aatcgcacca cgaaaggtgc attgctaggc
     3841 gcaggcgttg gtttacttac tggcaatggt gttaatggcg tactgaaagg tgcagctgtt
     3901 ggcgctggtg ttggtgcagt aacagaaaaa ggccgcgacg gtaaaaatgc gcgtaaaggt
     3961 gcaaaagtag gtgccgccgt tggtgctgtc actggcgttc tgaccggcaa tggcctcgaa
     4021 ggggcgatta aaggtgccgt gattggcggt acgggtggtg caattctggg taaaatgaaa
     4081 taaggaatga tgatgaaaaa atttgcttta ctggcgggcc tgtttgtttt cgcaccaatg
     4141 acctgggcgc aggactacaa tattaaaaac ggtttaccgt cagaaaccta tattacttgc
     4201 gcagaagcca acgaaatggc aaaaactgac agcgcacagg ttgcagaaat tgttgcggta
     4261 atgggtaatg ccagcgttgc cagccgtgat ttaaaaattg agcaatctcc ggaactgagc
     4321 gccaaagtgg tagaaaaact gaatcaggtt tgcgctaaag acccgcaaat gctgttgatc
     4381 acggcaattg atgacaccat gcgtgctatc ggcaaaaaat aatatttcat atgtaccgcg
     4441 tcgatgaata cgacgcggtt ttttagctaa cggcgggatc agaacttata tttcaggccc
     4501 accatcactg cggtgtcatt gtagccatta tcacccagct gcacgcccac attcccccag
     4561 acgctggccg ctggattcag gttgccattt acgccaagtt taatttcccc caaattactc
     4621 gccccatctt gttcgacttt cacaccgttc attgagacag caaaatcttt actgttatgg
     4681 atccagttca tttcaacaaa aggttcaaag tcgtcaccgt gcggaccgct gtttttctcc
     4741 tgagtacgaa taaaggtgcg gaaaccaagt cgggtctgga tgttgttatt tgcgtcattc
     4801 tcaatacgtg agccattggc ttcggtgtgc gcattatgat cgacgcccat ccagatagcc
     4861 tgtgcctgtg gctggaatat ccacgtgtat ttcgccgctt ccagaccaaa ggatttattc
     4921 agggcaaagc cctaacccgc ttccagcgag acggttgcgc ctttcgcact ataggattca
     4981 taggctaatt catccccttt caccgagttt ttaaaccagc tatattgcgc ccaggcgtca
     5041 atgtatgcgc cttttttact gatgtcatcg gcaaaccaag tggcatacag ccctgcgcaa
     5101 tagcctctga cactcccttt cgaacgataa tccgacacgc tggaatgagt tgagttgtag
     5161 tcgcgggcat aaccagccat cactcccaaa cgccaactgt cactgtcggt aaaaccaccg
     5221 gttaacagat cggcccctaa ctgcgagacg tagcgatgcg aggtcgttct caactgtccg
     5281 ttgctgtcac gccaggcatt atgcccgcca atttgacgta gccaaagtcg gcttgaacgc
     5341 tcctgttcag ttacaggatc gatgtagcgc atttcacccg cacggtcgtt cagacgcata
     5401 acaaaaagag tgttagcggc tgccaggttg gcgacgtaac ttccagcttc ggggcgcagg
     5461 acgggggtag gcgtttctgt tggttctgaa tttccctctg agctgttatc ctcctcattc
     5521 actgactgat aacttgtcaa ataccagttt ttgccttgtt gttttagttg atattcgaaa
     5581 gctccagctg caatccttgc atcaccttgt ctgaaggctt ctgctggaga ttcatcgcca
     5641 ttcacagtta tgagttcgat cccgtttagc gtggccgcgc cgcttcctcc agcatttttc
     5701 acatagacgg tagttgaacc cgaagtatta ccctcaacaa taagtctgtc cgtagccgat
     5761 ttatcatcac ctaatacggt gcggatatta agctgaccat tattaccgac ataattacct
     5821 tttacggtta atgtttttcc ttgggtaaat gtttgaccat catcatacga aagattgata
     5881 atactgtctg aattagtcag atgggtaaca acggagtcat ctttcatatt ccagattgta
     5941 ttttctgaaa gcttcagcgt ggttgtgccg ctaacgagtt tagtcgctcc atttagaata
     6001 gagtcggacg aaattatgtt taagtcacct ccagtattat taaccagaa
//
LOCUS       DADMJE010000201         6002 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.204, whole genome shotgun sequence.
ACCESSION   DADMJE010000201 DADMJE010000000
VERSION     DADMJE010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 6002)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6002)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6002
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.204"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..933
                     /locus_tag="JN001_003753"
                     /pseudo
     CDS             1..933
                     /locus_tag="JN001_003753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417591.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(1321..1697)
                     /gene="rnpB"
                     /locus_tag="JN001_003754"
     ncRNA           complement(1321..1697)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="JN001_003754"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(1730..2875)
                     /gene="garK"
                     /locus_tag="JN001_003755"
     CDS             complement(1730..2875)
                     /gene="garK"
                     /locus_tag="JN001_003755"
                     /EC_number="2.7.1.165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312029.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate 2-kinase"
                     /protein_id="HAY9054821.1"
                     /translation="MKIVIAPDSYKESLSASEVAQAIEKGFREIFPDAQYVSVPVADG
                     GEGTVEAMIAATQGSERHAWVTGPLGEKVNASWGISGDGKTAFIEMAAASGLELVPAE
                     KRDPLVTTSRGTGELILQALESGATNIIIGIGGSATNDGGAGMVQALGAKLCDANGNE
                     IGFGGGSLNTLNDIDISGLDPRLKDCVIRVACDVTNPLVGDNGASRIFGPQKGASEAM
                     IVELDNNLSHYAEVIKKALHVDVKDVPGAGAAGGMGAALMAFLGAELKSGIEIVTTAL
                     NLEEHIHDCTLVITGEGRIDSQSIHGKVPIGVANVAKKYHKPVIGIAGSLTDDVGVVH
                     QHGIDAVFSVLTSIGTLDEAFRGAYDNICRASRNIAATLAIGMRNAG"
     gene            complement(2972..3862)
                     /gene="garR"
                     /locus_tag="JN001_003756"
     CDS             complement(2972..3862)
                     /gene="garR"
                     /locus_tag="JN001_003756"
                     /EC_number="1.1.1.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312030.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxy-3-oxopropionate reductase"
                     /protein_id="HAY9054822.1"
                     /translation="MTMKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAA
                     GAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLA
                     SREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVV
                     HTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLD
                     AKAPMVMDRNFKPGFRIDLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGT
                     ADHSALACYYEKLAKVEVTR"
     gene            complement(3892..4662)
                     /gene="garL"
                     /locus_tag="JN001_003757"
     CDS             complement(3892..4662)
                     /gene="garL"
                     /locus_tag="JN001_003757"
                     /EC_number="4.1.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydro-3-deoxyglucarate aldolase"
                     /protein_id="HAY9054823.1"
                     /translation="MNNDVFPNKFKAALAAKQVQIGCWSALSNPISTEVLGLAGFDWL
                     VLDGEHAPNDISTFIPQLMALKGSASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVET
                     KEEAEQAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGVDN
                     VDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP
                     VEADARRYLEWGATFVAVGSDLGVFRSATQKLADTFKK"
     gene            complement(4678..5976)
                     /locus_tag="JN001_003758"
     CDS             complement(4678..5976)
                     /locus_tag="JN001_003758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005155249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9054824.1"
                     /translation="MHTRYLILLIIFIVTAVNYADCATLSIAGTEVAKELQLSTVSMG
                     YIFSAFGWAYLLMQIPGGWLLDKFGSKKVYTYSLFFWSLFTFLQGFVDMFPLAWAGIS
                     MFFMRFMLGFSEAPSFPANARIVAAWFPTKERGTASAIFNSAQYFSLALFSPLLGWLT
                     FAWGWEHVFTVMGVIGFVLTALWIKLIYNPTDHPRMSAEELKFISENGAVVDMDHKKP
                     GSAAASGPKLHYIKQLLSNRMMLGVFFGQYFINTITWFFLTWFPIYLVQEKGMSILKV
                     GLVASIPALCGFAGGVLGGVFSDYLIKRGLSLTLARKLPIVLGMLLASTIILCNYTNN
                     TTLVVMLMALAFFGKGFGALGWPVISDTAPKEIVGLCGGVFNVFGNVASIVTPLVIGY
                     LVSELHSFNAALVFVGCSALMAMVCYLFVVGDIKRMELQK"
BASE COUNT         1595 a         1611 c         1349 g         1447 t
ORIGIN      
        1 gactcgtttc ttcgtctgga ttttttaggt tataacgccc aaattattca acgatcggac
       61 aatacctgcg aacttaccat taatgaaccg ttaaaaaacc aggaaatatc tacaggcaat
      121 atcaatgcta attgtccatt aaaagatatt tacaatgaaa tcaggaggtt gaacgcaacc
      181 tttagttgtg ggactggaga tatagttgat ctatcctctc tggacttacg taatgtcgat
      241 ttagattatt atgatttcac agataaacat atggctaata ctattctaaa tccttttaaa
      301 ttggattcaa caaattttac taatgccaac atgtttcagg ttaattttgt tagttcaaca
      361 caaaacgcca caatctcctg ggattattta ctaaaaataa cgcctgtttt aataagtatt
      421 agcgatatgt attctgaaga aaaaatcaag tttgtcgaaa gttgtttaaa tgagcttgga
      481 gacattaccg aagaacaatt aaaaattatg agatttgcaa ttataaaatc tataccaagg
      541 gcaactctta cagataaatt agaaaatgaa ttaacaaaag aaatatataa aagctcatcg
      601 aaaatcaaca attgcttgaa cagaattaaa ttaccagaga tgaaagaatt ctcatcaaga
      661 aaaaacatat gattacatcg atataatcat tgaagattat gaaaatatca aagaaaatgc
      721 ttatctggtc gtcccccaaa ttaattatac tatggattta aacatagaag actccagctc
      781 agaagagtta ataccctcga gaaagacgaa aattcttcgg acaatggctt tgaagtcgaa
      841 gaatataacg catatgaagc atataactca gagaatctat attttaccag agaggaatat
      901 acgtatgatt acgacctttc aaatgcaata tagacttaat aacttcttac aaaatctata
      961 attaataccg tagatattca ttcatcttac cctgtgcacc aaaagcaaaa actcactgac
     1021 gcgggtttga aactgatggc aaccgcaaaa atgcctgatg cgctacgctt atcaggccta
     1081 cgccatctct gcaatatatt gaatttgcgt gcttttgtag gcaggataag gcgttcacgc
     1141 cgcatccggc atgaataaag cgcactcaac aatctgaaac ccgccggaac ggtttattac
     1201 gtacatcagg tgaaactgac cgataagccg ctttcttttg ggtatagtgt cgtggacagt
     1261 cattcatctt tctgcccctc caaaagcaaa aacccgccga agcgggtttt tacgtaaatc
     1321 aggtgaaact gaccgataag ccgggttctg tcgtggacag tcattcatct aggccagcaa
     1381 tcgctcactg gctcaagcag cctacccggg ttcagtacgg gccgtacctt atgaacccct
     1441 atttggcctt gctccgggtg gagtttaccg tgccacggac tgttaccagc cgcgcggtgc
     1501 gctcttaccg caccctttca cccttacctg atcccgcttg cgcgggccat cggcggtttg
     1561 ctctctgttg cactggtcgt gggtttcccc cccaggcgtt acctggcacc ctgccctatg
     1621 gagcccggac tttcctcccc tccgcccgtc tcccccgaag aggacgacga cgaagcggcg
     1681 actgtctggt cagcttcggc gcgcagtata gagggtttgc gcgcccttgt caccccgcgt
     1741 tgcgcattcc aatcgccagt gtcgcggcga tattacgtga agcacggcag atattgtcat
     1801 aagccccgcg gaatgcttcg tccaacgtac ctatgctggt caatacgctg aagaccgcat
     1861 caatgccatg ctgatgtaca acgccaacat catcggtcag gctacccgca atgccaatca
     1921 ccggtttatg gtacttcttc gccacgtttg cgacaccaat cggtaccttg ccgtgaatac
     1981 tctggctgtc aatacgccct tcaccggtga tcaccagcgt acaatcgtga atatgttctt
     2041 ccagattcag cgccgtagtg acgatttcaa taccactttt cagttccgca ccaagaaacg
     2101 ccatcagcgc cgcgcccata ccgcccgcag ctcctgcgcc ggggacatct ttcacatcaa
     2161 catgcagcgc ttttttaatg acctcggcat agtgagagag gttattgtcc agctcaacaa
     2221 tcatcgcttc actggctccc ttttgtgggc caaagatgcg cgatgcgccg ttatcgccca
     2281 ccagcggatt ggtgacatca caagcgacgc gaatgacgca atcttttaag cgcggatcga
     2341 ggccggaaat atcaatatca ttcagagtat taagactacc gccgccaaaa ccaatttcat
     2401 tgccgttggc gtcgcataat ttcgccccca gcgcctgtac catgcctgcg ccgccatcat
     2461 ttgtagcgct gccgccaatg ccgataataa tgtttgtcgc accgctctcc agcgcctgca
     2521 ggattaactc gcctgtgccg cgtgaagtgg tcacgagtgg atcgcgtttt tccgcaggta
     2581 ccagctccag cccactggcc gccgccattt caataaacgc ggttttgcca tcgccggaga
     2641 tcccccaact ggcattcact ttctcgccca acggccctgt aacccaggcg tgacgttcgg
     2701 aaccctgggt ggctgcaatc atcgcttcca ccgttccttc gccaccgtcg gcaaccggaa
     2761 cagaaacgta ctgtgcatca ggaaaaattt cccgaaatcc tttttctatc gcctgcgcaa
     2821 cctcgctggc agataaactt tctttataag agtctggggc gattacgatt ttcataccta
     2881 tgcctgttac cacatgacgc cggagggcgt ttctcttatt cggcgtggat tccaggcccg
     2941 gattgcaata cgccatccgg gcacgacgtc attaacgagt aacttcgact ttcgccagtt
     3001 tttcgtagta gcacgccaga gcgctatgat ccgccgttcc taaaccatct gcacgcagtg
     3061 cctgcatcat ctccataacc gcagctgtga gcggcagttg cgcgccgacg ccgtgagaag
     3121 tatccagcgc attcgccaga tccttaatat gcagatcaat gcggaagccc ggcttgaagt
     3181 tgcggtccat caccatcggc gctttggcat ccagcacggt actgcccgcc agcccaccgc
     3241 gaattgcctg ataaaccagg tccgggttaa cgcccgcttt agttgccagc gttaacgctt
     3301 ctgacatcgc agcaatattc agcgccacaa tgacctgatt tgccagtttg gtgacgttac
     3361 ctgcaccgat ttccccggta tgcaccacgg aacccgccat cgctttcatc aaatcatagt
     3421 atttgtcgaa aatagccttg tcgccgccca ccatcactga cagcgtaccg tcgatggctt
     3481 tcggttcacc gccgctcacc ggagcatcca gcatatcaat gcctttcgct ttcagcgctt
     3541 cgctgatttc acggcttgcc agcggtgcga tagaactcat atcgatcaat accgtacctg
     3601 gcttcgcgcc ttcaataatg ccattctcac ccagcgccac ctctttcaca tgaggggagt
     3661 ttggcagcat ggttatgatg acgtcgcact gttcagcgat cgctttagcc gtagacgctg
     3721 tttctgcacc tgcagcaatc acgtcagcaa tagcttctgg gttacggtca gcaaccacca
     3781 gcgagtaacc tgctttcaga aggtttttac tcattggttt acccataatc cccaggccaa
     3841 taaaaccaac tttcatagtc atatcaatca tctctcttgt tgcggtggtg gttatttttt
     3901 aaaggtatca gccagtttct gagtggcaga gcggaagacg ccaagatcgc tgccgacagc
     3961 cacaaacgtc gcgccccatt ccagataacg acgcgcatcg gcttcgaccg gcgcgagaat
     4021 accgctgggt ttgccgtgcg cactggcacg gttaaaaata tgctgaattg ctttttgtac
     4081 atccggatgc gaggcattgc cgagatggcc caatgccgca gccagatcgc tggggccgac
     4141 gaagataccg tctacacctt cggtagcggc aatagcatcg acgttatcta cgccctgctg
     4201 actttctatc tggaccagaa tagtgatgtt cttgttcgac tgagcgaaat aatccgccac
     4261 ggtgccaaac atattggcgc ggtgagaaac ggagacgccg cgaatgcctt ccggcgggta
     4321 acgagttgat gccaccgcct gctctgcttc ctcttttgtt tctacaaaag gaatcaggaa
     4381 attatagaaa ccgatatcca gaagacgctt aataattacc ggctcgttgg tcggcactcg
     4441 cactactggc gcgctggcgc tgcctttcag ggccattaac tgcggaataa acgtggaaat
     4501 atcgtttggc gcatgttcgc catccagcac cagccagtca aacccagcca aaccaagaac
     4561 ttcagtgcta atcgggttag agagtgctga ccagcaacca atttgtacct gtttcgcagc
     4621 cagtgcggct ttgaatttat tcgggaaaac atcgttattc atcgcttata cctttgctta
     4681 tttctgcaat tccatacgtt taatgtcgcc aactacgaag aggtagcaga ccatcgccat
     4741 cagcgctgaa catcccacga aaaccagtgc tgcattgaag gagtgcagtt cacttaccag
     4801 gtagccaatc accagtggag tgacaatgga ggcaacattg ccaaagacgt taaagacgcc
     4861 gccacagagg ccaacaatct ctttcggcgc ggtgtcagaa atcaccggcc agcccagagc
     4921 accaaatcct ttgccaaaaa aagccagcgc catcagcatg accaccagcg tggtgttgtt
     4981 ggtgtagtta cataagatga tggtggaagc cagcaacatt cccagcacaa tcggtagctt
     5041 acgtgccagg gtcagggata aaccgcgttt gatcagataa tccgagaaga cacctcccag
     5101 cacgccgccc gcaaaaccac acagtgccgg aatcgaggcg accagaccca ctttcagaat
     5161 cgacatgcct ttttcctgca ccagataaat cgggaaccag gtgaggaaga accaggtgat
     5221 ggtgttgata aaatattgtc cgaaaaatac gcccaacatc atgcggttag agagcaattg
     5281 cttgatgtaa tgcagtttgg gaccgcttgc tgccgcgctg cccggctttt tgtggtccat
     5341 atcgaccacc gcgccatttt cagagataaa cttcagctct tccgcagaca tacgtgggtg
     5401 atctgtcggg ttataaatca acttgatcca cagcgccgtc agcacaaaac caatcacccc
     5461 cataacggtg aagacgtgct cccagcccca ggcgaaagtc agccagccaa gcagaggcga
     5521 aaagagcgcc agcgagaaat attgcgccga gttaaagatg gcggaggcag taccacgttc
     5581 tttcgtcggg aaccaggcgg cgacaatacg ggcgttcgcc gggaatgatg gcgcttccga
     5641 gaagccgagc ataaagcgca taaagaacat agagatccct gcccaggcca gcgggaacat
     5701 atcaacaaag ccttgcagga aggtgaatag cgaccagaaa aagaggctgt aggtgtaaac
     5761 ttttttcgag ccaaacttat caagcagcca gccgccggga atttgcatca gcaggtaggc
     5821 ccagccaaaa gcggagaaga tgtaacccat cgaaaccgta cttaactgca actcttttgc
     5881 cacttcggta ccagcaatag acagcgttgc acaatcggcg tagttaacgg cggtaacaat
     5941 aaaaataatc agtaatatta aatagcgggt atgcacgcct ttctttttta cgtcaacggt
     6001 gt
//
LOCUS       DADMJE010000202         5816 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.205, whole genome shotgun sequence.
ACCESSION   DADMJE010000202 DADMJE010000000
VERSION     DADMJE010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5816
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.205"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..857
                     /gene="pdeC"
                     /locus_tag="JN001_003759"
     CDS             <1..857
                     /gene="pdeC"
                     /locus_tag="JN001_003759"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY9054825.1"
                     /translation="FALPAGILGSLVLLLLWLRIRQNYLSPKRKLQRALEKHQLCLYY
                     QPIIDIKTEKCIGAEALLRWPSEQEQVMNPAEFIPLAEKEGMIEQVTDYVIDNVFRDL
                     GDYLATHADRYVSINLSASDFHTSRLIARINQKTEQYAVRPQQIKFEVTEHAFLDVEK
                     MTPIILAFRQAGYEVAIDDFGIGYSNLHNLKSLNVDILKIDKSFVETLTTHKTSHLIA
                     EHIIELAHSLGLKTIAEGVETEEQVNWLRKRGVRYCQGWFFAKAMPPQVFMQWMEQLP
                     ARELTRGQ"
     gene            complement(860..1183)
                     /gene="soxS"
                     /locus_tag="JN001_003760"
     CDS             complement(860..1183)
                     /gene="soxS"
                     /locus_tag="JN001_003760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide response transcriptional regulator
                     SoxS"
                     /protein_id="HAY9054826.1"
                     /translation="MSHQKIIQDLIAWIDEHIDQPLNIDVVAKKSGYSKWYLQRMFRT
                     VTHQTLGDYIRQRRLLLAAVELRTTERPIFDIAMDLGYVSQQTFSRVFRRQFDRTPSD
                     YRHRL"
     gene            1269..1733
                     /gene="soxR"
                     /locus_tag="JN001_003761"
     CDS             1269..1733
                     /gene="soxR"
                     /locus_tag="JN001_003761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensitive transcriptional activator SoxR"
                     /protein_id="HAY9054827.1"
                     /translation="MEKKLPRIKALLTPGEVAKRSGVAVSALHFYESKGLITSIRNSG
                     NQRRYRRDVLRYVAIIKIAQRIGIPLATIGEAFGVLPEGHTLSAKEWKQLSSQWREEL
                     DRRIHTLVALRDELDGCIGCGCLSRSDCPLRNPGDRLGEEGTGARLLEDEQN"
     gene            2279..3628
                     /locus_tag="JN001_003762"
     CDS             2279..3628
                     /locus_tag="JN001_003762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005132609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY9054828.1"
                     /translation="MSTPSARTGGSLDAWFKISQRGSTVRQEVVAGLTTFLAMVYSVI
                     VVPGMLGKAGFPPAAVFVATCLVAGLGSIVMGLWANLPLAIGCAISLTAFTAFSLVLG
                     QHISVPVALGAVFLMGVLFTVISATGIRSWILRNLPHGVAHGTGIGIGLFLLLIAANG
                     VGLVIKNPLDGLPVALGDFATFPVIMSLVGLAVIIGLEKLKVPGGILLTIIGISIVGL
                     IFDPNVHFSGVFGMPSLSDENGNSLIGSLDIMGALNPVVLPSVLALVMTAVFDATGTI
                     RAVAGQANLLDKDGQIIDGGKALTTDSMSSVFSGLVGAAPAAVYIESAAGTAAGGKTG
                     LTAITVGVLFLLILFLSPLSYLVPGYATAPALMYVGLLMLSNVAKIDFADFVDAMAGL
                     VTAVFIVLTCNIVTGIMIGFATLVIGRLVSGEWRKLNIGTVVIAVALVTFYAGGWAI"
     gene            3780..5429
                     /locus_tag="JN001_003763"
     CDS             3780..5429
                     /locus_tag="JN001_003763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HAY9054829.1"
                     /translation="MEIFFTILIMTLVVSLSGVVTRVMPFQIPLPLMQIAIGALLAWP
                     TFGLHVEFDPELFLVLFIPPLLFADGWKTPTREFLEHGREIFGLALALVVVTVVGIGF
                     LIYWVVPGIPLIPAFALAAVLSPTDAVALSGIVGEGRIPKKIMGILQGEALMNDASGL
                     VSLKFAVAVAMGTMIFTVGGATVEFMKVAIGGILAGFVVSWLYGRSLRFLSRWGGDEP
                     ATQIVLLFLLPFASYLIAEHIGVSGILAAVAAGMTITRSGVMRRAPLAMRLRANSTWA
                     MLEFVFNGMVFLLLGLQLPGILETSLMAAEIDPNVEIWMLFTDIILIYAALMLVRFGW
                     LWTMKKFSNRFLKKKPMEFGSWTTREILIASFAGVRGAITLAGVLSIPLLLPDGNVFP
                     ARYELVFLAAGVILFSLFVGVVMLPILLQHIEVADHSQQLKEERIARAATAEVAIVAI
                     QKMEERLAADTEENIDNQLLTEVSSRVIGNLRRRADGRNDVESSVQEENLERRFRLAA
                     LRSERAELYHLRATREISNETLQKLLHDLDLLEALLIEENQ"
     gene            complement(5583..>5816)
                     /locus_tag="JN001_003764"
     CDS             complement(5583..>5816)
                     /locus_tag="JN001_003764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HAY9054830.1"
                     /translation="MFNTRLYRVNFDEASVQGMGISILRGEENIPIDSDTLVTLQKFF
                     EEDCTSHTGMSQTEDNINAVAMKITADIMQHAD"
BASE COUNT         1257 a         1376 c         1602 g         1581 t
ORIGIN      
        1 tttttgcgtt gcccgccggt attttgggga gtcttgttct gctattactc tggctacgta
       61 ttcgacaaaa ctatttgtct cccaaacgca aattgcaacg cgctctagaa aaacatcaac
      121 tttgtcttta ttaccagcca ataatcgata tcaaaacaga aaaatgtatc ggcgctgaag
      181 cgttgttacg ttggcctagt gagcaggagc aagtaatgaa tccggcagag tttattccgc
      241 tggcagaaaa ggaggggatg atagaacagg taactgatta tgttattgat aatgtcttcc
      301 gcgatctggg cgattacctg gcaacacatg cagatcgcta tgtttctatt aacctgtcgg
      361 cctccgattt tcatacgtca cggttgatag cgcgaatcaa tcagaaaaca gagcaatacg
      421 cggtgcgtcc gcagcaaatt aaatttgaag tgactgagca tgcatttctt gatgtcgaaa
      481 aaatgacgcc gattattctg gctttccgcc aggctggtta cgaagtggca attgatgatt
      541 ttggtattgg ctactctaac ttgcataacc ttaaatcatt gaatgtcgat attttgaaaa
      601 tcgataaatc gtttgttgaa acgctgacca cccacaaaac cagtcatttg attgcggaac
      661 acatcatcga gctggcgcac agcctggggt taaaaacgat cgctgaaggc gtcgaaactg
      721 aggagcaggt taactggctg cgcaaacgcg gcgtgcgcta ttgccaggga tggttttttg
      781 cgaaggcgat gccgccgcag gtgtttatgc aatggatgga gcaattaccc gcgcgggagt
      841 taacgcgcgg gcaataaaac tacaggcggt ggcgataatc gctgggagtg cgatcaaact
      901 gccgacggaa aacgcgggag aaggtctgct gcgagacata acccaggtcc attgcgatat
      961 caaaaatcgg acgctcggtg gtgcgcaact caacggcggc cagtaacagg cgacgttggc
     1021 gaatgtaatc gccaagcgtc tgatgcgtca ccgtgcggaa cattcgttgc aagtaccact
     1081 ttgaatagcc tgattttttt gcgactacat caatgttaag cggctggtca atatgctcgt
     1141 caatccatgc gataagatcc tgaataattt tctgatggga cataaatctg cctcttttca
     1201 gtgttcagtt cgttaattca tctgttgggg agtataattc ctcaagttaa cttgaggtaa
     1261 agcgatttat ggaaaagaaa ttaccccgca ttaaagcgct gctaaccccc ggcgaagtgg
     1321 cgaaacgcag cggtgtggcg gtatcggcgc tgcatttcta tgaaagtaaa gggttgatta
     1381 ccagtatccg taacagcggc aatcagcggc gatatagacg tgatgtgttg cgatatgttg
     1441 caattatcaa aattgctcag cgtattggca ttccgctggc gaccattggt gaagcgtttg
     1501 gcgtgttgcc agaagggcat acgttaagtg cgaaagagtg gaaacagctt tcgtcccaat
     1561 ggcgagaaga gttggatcgg cgcattcata ccttagtggc gctgcgtgac gaactggacg
     1621 gatgtattgg ttgtggctgc ctttcgcgca gtgattgccc gttgcgtaac ccgggcgacc
     1681 gcttaggaga agaaggtacc ggcgcacgct tgctggaaga tgaacaaaac taaagcgcca
     1741 caagggcgct ttagtttgtt ttccggtctt tgtctttctc tctatcccgc tggtacacag
     1801 gaggttttcc cccgacgtca acacacctca ttcgagcacg tggtggaggt tccggttggt
     1861 gttgatgctt taattgtatg tcaccgacgt ttcttcgcca gtgtaaaagt atacttttta
     1921 accgcaatat ttttgtcatc tcagacgatt ttttatcgca atcctgaacg gtatacggct
     1981 cgataacgct gcaatcttgc gcaccgacga taacgtttgc gcatcaattg cctgtttttt
     2041 catcgtcaag acaataaaag agaaaaaagc agcaaacttc ggttgaaaaa gccgctatga
     2101 tcgccggata atcgtttgct ttttttacca cccgttttgt atgcgcggag ctaaacgttt
     2161 gcttttttgc gacgcagtaa attgtcgcaa acctggagca ggaagataac gtttcgctgg
     2221 caggggattg tccgccacgc atcttgacga aaattaaact ctcaggggat gttttcttat
     2281 gtctacgcca tcagcgcgta ccggcggttc actcgacgcc tggtttaaaa tttcacaacg
     2341 tggaagcact gtccgtcagg aagtggttgc cgggttaaca acgtttctgg cgatggtcta
     2401 ctcggtcatc gtcgttccag gtatgttggg taaagcaggc ttcccgcctg cggcagtttt
     2461 cgttgcaacc tgtctggttg ccggactcgg ttctatcgtg atgggtctgt gggctaatct
     2521 gccgttggcg attggttgcg ccatctccct gacggcgttt accgcattca gcctggtgct
     2581 ggggcaacat attagcgtac ctgtcgcgct gggtgccgtg ttcctgatgg gtgtgctgtt
     2641 tacggtaatt tctgccacgg gtatccgtag ctggattttg cgcaacttgc cgcacggtgt
     2701 ggcgcacggc acggggatcg gtatcggtct gttcctgctg ctcattgccg ctaatggtgt
     2761 tggtctggtg attaaaaacc cgcttgatgg tctgcccgtt gcgctgggtg atttcgcgac
     2821 cttcccggtg attatgtcac tggtaggtct ggcggtgatc atcggcctgg aaaaactgaa
     2881 agtccctggt ggcattctgc tgaccattat cggtatctca attgtcggtt tgatcttcga
     2941 tcctaacgtc catttctccg gcgttttcgg catgccttca ttgagcgatg aaaacggcaa
     3001 ttcactgatt ggcagcctgg acattatggg cgcgctgaat cctgtagtcc tgccaagcgt
     3061 tctggcgctg gtgatgacgg cagtatttga tgccaccgga actatccgtg ccgtcgccgg
     3121 ccaggcgaac ctgctggata aagatgggca gatcatcgac ggtgggaaag cactgaccac
     3181 tgactccatg agcagcgttt tctctggcct ggtgggtgct gctccggcag cggtatacat
     3241 cgagtctgcg gcgggtacgg cggcgggcgg taaaaccggt ttgacggcta tcaccgttgg
     3301 cgtgctgttc ctgctgattc tgttcctctc tccgctctct tacctcgttc cggggtatgc
     3361 aacggctccg gcgctgatgt acgttggcct gctgatgctg agcaacgtgg cgaaaatcga
     3421 ctttgctgat tttgttgatg cgatggcggg tctggttacg gcggtattca tcgtgctgac
     3481 ctgtaacatc gtaacaggca tcatgatcgg cttcgcgact ctggtgattg gtcgtctggt
     3541 ttccggcgaa tggcgcaagt tgaacatcgg tacggtcgtt atcgccgtgg cgctggtgac
     3601 cttctatgcg ggtggctggg ctatctaatc tttcatcgga ttctgaaaac gggtggcaat
     3661 ggctgcccgt ttttattttc tccgcacatt gtgtgagctt ttgcgatatt ctgaaaaaat
     3721 gagaattcag gcataacgcc tttctcagat cataaaaaaa catcgcaaac agggaacgca
     3781 tggaaatctt cttcaccata ctgataatga ccctcgtggt ctcgctgtcc ggggtggtca
     3841 ctcgtgtcat gccctttcag atcccgcttc cgcttatgca aatcgccatc ggtgcgctac
     3901 tggcgtggcc gacgtttggt ttgcatgtgg agtttgatcc tgaactcttt ttagtcttgt
     3961 ttatcccgcc gttgctgttc gctgatggct ggaaaacgcc gacccgtgaa tttctcgaac
     4021 atggtcgaga gattttcggc ctcgcgctgg cgctggtggt ggtcaccgtg gtcggcattg
     4081 gcttccttat ttactgggtg gtgccgggca ttccgctgat ccccgccttt gcgctggcgg
     4141 cggtactttc tccgaccgat gctgtggcgc tctccggaat tgttggcgaa gggcgcatcc
     4201 cgaaaaaaat catgggcatt ttgcagggcg aagcgttgat gaatgacgcc tccggcctgg
     4261 tgtcgttgaa gtttgccgtg gcagtggcga tggggacgat gatcttcacc gtcggcggtg
     4321 cgacggtcga atttatgaaa gtagccattg gtggtattct tgccggtttt gtggtgagct
     4381 ggctgtatgg tcgctcgctg cgattcctca gccgctgggg cggtgatgaa cccgcgacgc
     4441 agatcgttct gctgttcttg ctgccattcg cttcttatct gattgccgaa catattggcg
     4501 tttccggcat cctcgctgcg gttgccgccg ggatgaccat cacccgctcc ggtgtgatgc
     4561 gccgtgcgcc gctggcaatg cgcctgcgcg caaacagcac ctgggcgatg ctggaatttg
     4621 tctttaacgg catggtgttc ctgctgttag gtctgcagct gccgggtatt ctggagacgt
     4681 cgctgatggc ggcagaaatc gaccctaacg tcgaaatctg gatgctgttt accgatatta
     4741 ttctgatata tgcggcgctg atgctggtcc gtttcggctg gctgtggacg atgaaaaagt
     4801 tcagcaaccg cttcctgaag aagaagccga tggagtttgg ttcgtggacc acacgagaaa
     4861 tcctgatcgc gtctttcgcc ggggtgcgtg gggcgatcac tctggccggt gtgctctcta
     4921 tcccgctgct cttgccggat ggtaacgtct tcccggcgcg ctatgagctg gtgttcctgg
     4981 cggctggcgt cattctcttc tcgctgtttg tcggtgtggt gatgttgcct attctgctac
     5041 aacacattga agtcgcggat cattcgcaac aattgaaaga ggaacgtatt gcgcgagcgg
     5101 caacggcaga agtggcgatt gtggcgatcc agaaaatgga ggagcgtctg gcggcggata
     5161 ccgaagagaa tatcgataac cagctgctta cggaggtcag ttctcgcgtc attggtaacc
     5221 tgcgtcgtcg cgccgatgga cgtaacgacg ttgaaagttc cgtgcaggaa gagaaccttg
     5281 agcgtcgctt ccgtctggcg gcattgcgtt ctgaacgtgc tgaactgtac cacctgcgcg
     5341 ccacgcggga gatcagcaac gaaacgctgc aaaaattact gcacgatctc gatttgcttg
     5401 aagcgttgct aattgaggaa aatcagtaag ccgaaagcga cgtaaccagg cccgaggtaa
     5461 tctgaaaaag gtgcaatctt ttgcaccttt aacaggttag ctcgggctaa cattcatgat
     5521 tctaaaacaa ataagttatc tctcttgtaa agtcaattca ttggctgttc ttcgacttaa
     5581 cctcaatctg cgtgttgcat aatatctgca gtaatcttca tagcgactgc attaatatta
     5641 tcctcagttt gtgacatgcc agtatgagag gtacaatctt cttcaaagaa tttctgtagt
     5701 gttaccaggg tatcactatc aatggggata ttttcctctc cacggagtat ggaaatgccc
     5761 attccctgga cgctagcctc atcaaaatta acccgataga gacgggtatt aaacat
//
LOCUS       DADMJE010000203         5791 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.206, whole genome shotgun sequence.
ACCESSION   DADMJE010000203 DADMJE010000000
VERSION     DADMJE010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5791)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5791)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5791
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.206"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(135..2063)
                     /gene="dhaR"
                     /locus_tag="JN001_003765"
     CDS             complement(135..2063)
                     /gene="dhaR"
                     /locus_tag="JN001_003765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase operon
                     transcriptional regulator DhaR"
                     /protein_id="HAY9054831.1"
                     /translation="MRDMSGAFNNDGRGISPLIATSWERCNKLMKRETWSVPHQAQGV
                     TFASIYRRKKAMLTLGQAALEDAWEYMAPRECALFILDETACILSRNGDPQTLQQLSA
                     LGFHDGTYCAEGIIGTCALSLAAISGQAVKTMADQHFKQALWNWAFCATPLFDSKGRL
                     TGTIALACPVEQTTAADLPLTLAIAREVGNLLLTDSLLAETNRHLNQLNALLESMDDG
                     VISWDEQGNLQFINAQAARVLRLEATASQGRAITELLTLPAVLQQAIKQAHPLKHVEA
                     TFESQHQFIDAVITLKPIIETQGTSFILLLHPVEQMRQLMTSQLGKVSHTFAHMPQDD
                     PQTRRLIHFGRQAARSSFPVLLCGEEGVGKALLSQAIHNESERAAGPYIAVNCELYGD
                     AALAEEFIGGDRTDNENGRLSRLELAHGGTLFLEKIEYLAVELQSALLQVIKQGVITR
                     LDARRLIPIDVKVIATTTADLAMLVEQNRFSRQLYYALHAFEITIPPLRMRRGSIPAL
                     VNNKLRSLEKRFSTRLKIDDDALARLVSCAWPGNDFELYSVIENLALSSDNGRIRVSD
                     LPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAAQVTGGRIQEMSALLGIGRTTL
                     WRKMKQHGIDAGQFKRRV"
     gene            2282..3391
                     /gene="dhaK"
                     /locus_tag="JN001_003766"
     CDS             2282..3391
                     /gene="dhaK"
                     /locus_tag="JN001_003766"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000733719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HAY9054832.1"
                     /translation="MKKLINDVQDVLDEQLAGLAKAHPSLTLHQDPVYVTRADAPVAG
                     KVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLI
                     IKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLV
                     GAAAERGDSLDACAELGRKLNNQGHSIGIALGACTVPAAGKPSFTLADNEMEFGVGIH
                     GEPGIDRRSFSSLDQTVDEMFDTLLGNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGD
                     RVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLK
                     VDDETLALWDAPVHTPALNWDKLGESNVTEQNSNC"
     gene            3363..3995
                     /gene="dhaL"
                     /locus_tag="JN001_003767"
     CDS             3363..3995
                     /gene="dhaL"
                     /locus_tag="JN001_003767"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase ADP-binding subunit
                     DhaL"
                     /protein_id="HAY9054833.1"
                     /translation="MSLSRTQIVNWLTRCGDIFSTESEYLTGLDREIGDADHGLNMNR
                     GFSKVVEKLPAIADKDIGFILKNTGMTLLSSVGGASGPLFGTFFIRAAQATQARQSLT
                     LEELYQMFRDGADGVISRGKAEPGDKTMCDVWVPVVESLRQSSEQNLSVPVALEAASS
                     IAESAAQSTITMQARKGRASYLGERSIGHQDPGATSVMFMMQMLALAAKE"
     gene            4006..5424
                     /gene="dhaM"
                     /locus_tag="JN001_003768"
     CDS             4006..5424
                     /gene="dhaM"
                     /locus_tag="JN001_003768"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415716.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaM"
                     /protein_id="HAY9054834.1"
                     /translation="MVNLVIVSHSSRLGEGVGELARQMLMSDSCKIAIAAGIDDPQNP
                     IGTDAVKVMEAIESVADADHVLVMMDMGSALLSAETALELLAPKIAAKVRLCAAPLVE
                     GTLAATVSAASGADIDKVIFDAMHALEAKREQLGLPSSDTEISDTCPAYDEEARSLAV
                     VIKNRNGLHVRPASRLVYTLSTFNADMLLEKNGKCVTPESINQIALLQVRYNDTLRLI
                     AKGPEAEEALIAFRQLAEDNFGETEEVAPPTLRPVPPVSGKAFYYQPVLYTVQAKSTL
                     TVEEEQDRLRQAIDFTLLDLMTLTAKAEASGLDYIAAIFSGHHTLLDDPELLAAASEL
                     LQHEHCTAEYAWQQVLKELSQQYQQLDDEYLQARYIDVDDLLHRTLVHLTQTKEELPQ
                     FNSPTILLAENIYPSTVLQLDPAVVKGICLSAGSPVSHSALIARELGIGWICQQGEKL
                     YAIQPEETLTLDVKTQRFNRQG"
BASE COUNT         1459 a         1475 c         1426 g         1431 t
ORIGIN      
        1 agcaagtcaa cggaggatat cgcttcagct tttaagtgcg tgatagacaa gcccttaaac
       61 gatgctgaaa aatgttagcg tgcgccggaa tgaaatatag atcactctga tgtattagaa
      121 atcgtttctg tctttcatac ccggcgctta aactgccctg catcaatgcc atgttgcttc
      181 attttccgcc acagcgtagt gcggccgatt ccaagtaaag ccgacatttc ctgaatgcga
      241 ccgcctgtga cctgggctgc gttaataatt gcctcttttt caacttccgc aaatgacaga
      301 ctggtggaaa ggcgggtggc gctgacatca tctgttgcct gctcggtaaa cagatgttcc
      361 ggcaaatcac tgacgcgaat gcgcccatta tcactactca gagcaagatt ctcgatgacg
      421 ctgtaaagtt caaaatcgtt gcctggccat gcacaagaaa ccaggcgagc gagggcatcg
      481 tcatcaattt tcagccgcgt agagaagcgt ttttcaagac tgcgtaattt gttattcacc
      541 agcgccggaa tgctgccacg ccgcatacgc agaggcggga tggtaatttc aaatgcatgc
      601 agcgcgtaat acagctggcg actaaaacga ttttgttcca ccagcattgc gaggtccgcg
      661 gtcgttgttg caatcacttt gacatcaatt ggtattaaac gccgcgcatc cagtcgcgtg
      721 ataacaccct gcttgataac ctgaagcaaa gcagactgta actccaccgc cagatattca
      781 atcttttcaa gaaacagcgt gccgccgtgc gccagttcca gccgactcag acggccattt
      841 tcattgtccg tacgatcgcc accaataaat tcttccgcca gtgccgcatc accatataac
      901 tcacaattga cggcgatata aggacctgca gcacgctcgc tttcattatg aattgcctga
      961 cttagcagtg ccttgcccac gccctcttct ccacaaagca ggacaggaaa gctactgcgc
     1021 gccgcctggc gaccaaaatg aatcaagcgg cgggtttgcg gatcgtcctg tggcatatga
     1081 gcaaaggtat ggctgacttt tcctaattga ctggtcatca actgccgcat ctgttccaca
     1141 ggatggagca acaaaataaa gctggttccc tgcgtttcta ttatcggttt aagggttatc
     1201 accgcatcaa taaactgatg ctgactttca aaggttgctt ctacgtgttt gagcggatgt
     1261 gcctgtttta ttgcttgttg caatacggcg ggtaacgtta agagttcagt gattgcccgt
     1321 ccctgacttg ccgtcgcttc aaggcgcaag acccgcgccg cctgggcatt gataaattgc
     1381 aaattaccct gctcgtccca gctaatcacg ccatcatcca tactttctaa cagggcatta
     1441 agttgattta aatgacggtt agtttcagcg agcaaactgt ccgtcagcag taaatttccg
     1501 acctcgcggg cgattgccaa cgtcaacggc aaatcagctg cggtagtttg ctcaaccgga
     1561 cacgccagcg ctattgttcc cgtcaatcgg cccttgctgt caaacaacgg cgttgcacaa
     1621 aaggcccagt tccagagtgc ctgtttgaaa tgttgatcgg ccatcgtttt cacggcctga
     1681 ccagagatag ccgctaacga tagcgcacaa gtaccaataa ttccctcggc gcaatacgtg
     1741 ccgtcatgga atccaagtgc acttagctgc tgcaaggttt gcggatcgcc attacggctg
     1801 agaatgcagg cggtttcatc gaggataaac agcgcacact ctcgcggtgc catatattcc
     1861 caggcatctt ccagcgcagc ctgcccgagc gtcagcatcg ctttcttacg ccgataaata
     1921 gaagcaaatg tcacgccctg ggcctgatgt ggtacgctcc atgtctcccg tttcatcagc
     1981 ttattgcatc gctcccagga ggttgcaatt aagggagata tgccccgacc atcgttgtta
     2041 aaagcgccac tcatatcccg catcccttat gacaaaaggt gttccggctc gcaattttaa
     2101 gtattaatac acgtaaaagt ttcaatatgg aacattcatt aaagcatatg tttcactatg
     2161 aaacataatt tgggctaatt ttcttttccc ttgcctgatg cacaatggat tcatcggcag
     2221 tcagtggtcg ccgtgtcgtt gaacatcatc catgccctac cgtaattgct ggagcaaaat
     2281 aatgaaaaaa ttgatcaatg atgtgcaaga cgtactggac gaacaactgg caggactggc
     2341 gaaagcgcat ccatcgctga cattgcatca ggatccggtg tatgtcaccc gagctgatgc
     2401 ccctgttgca ggaaaagtcg ccctgctgtc gggtggcggc agcggacacg agccgatgca
     2461 ctgtgggtat atcggtcagg ggatgctttc gggggcctgt ccgggcgaaa ttttcacctc
     2521 accgacgccc gataaaatct ttgaatgcgc catgcaagtt gatggcggcg aaggtgtact
     2581 gttgattatc aaaaattaca ccggcgatat tcttaacttt gaaacagcga ccgagttact
     2641 gcacgatagc ggcgtaaaag tgaccactgt ggtcattgat gacgacgttg cggtaaaaga
     2701 cagtctttat actgccgggc gacgcggcgt tgccaacacc gtattaattg aaaaactcgt
     2761 aggcgcagcg gcggagcgtg gcgactcact ggacgcctgt gcggaactgg ggcgtaagtt
     2821 gaataatcaa ggccactcaa taggtatcgc tctcggtgcc tgtaccgttc ctgccgcggg
     2881 caaaccttct tttaccctgg cggataatga gatggagttt ggcgtcggca ttcatggtga
     2941 gccgggtatt gaccgccgct ccttctcttc ccttgatcaa accgtcgatg aaatgttcga
     3001 caccctgctg ggaaatggct cataccatcg cactttacgt ttctgggatt atcaacaagg
     3061 cagttggcag gaagaacaac aaaccaaaca accgctccag tctggcgatc gggtgattgc
     3121 gctggttaac aatcttggcg caactccgct ttctgagctg tacggcgtct ataaccgcct
     3181 gaccacacgt tgccagcaag cgggattgac tatcgaacgt aatttaattg gcgcgtactg
     3241 tacctcactg gatatgaccg gtttctcaat caccttactg aaagttgatg acgaaacgct
     3301 ggcactctgg gacgccccgg tccacacccc ggcccttaac tgggataaat taggagaaag
     3361 caatgtcact gagcagaact caaattgtta actggctcac tcgttgtggc gatattttca
     3421 gcaccgagag cgagtatctt accggactgg atcgcgaaat tggcgacgct gaccacgggc
     3481 taaatatgaa ccgaggcttt agcaaagtgg tggaaaaact ccctgctatc gcagataaag
     3541 atatcggttt cattctcaag aataccggta tgacgctgct ttccagcgtc ggtggtgcca
     3601 gtggtccgct gttcggtacc ttctttatcc gcgccgcaca ggcgacccag gcacggcaaa
     3661 gcctgacact ggaagagctt tatcagatgt tccgcgatgg cgcggacggc gtaatcagtc
     3721 gcgggaaagc cgaacctggc gataaaacca tgtgtgatgt gtgggtgccg gtggtggaat
     3781 cgttacgtca gtccagcgag caaaatctct ctgttccggt ggcgctcgaa gctgccagta
     3841 gcatcgccga atccgctgca caaagtacga ttacgatgca agcccgcaaa ggccgcgcca
     3901 gttatctcgg tgaacgcagt attggtcacc aggatcccgg cgcgacctcg gtgatgttta
     3961 tgatgcaaat gttggcgtta gccgcaaaag agtaaggaat tggtgatggt aaacctggtc
     4021 atagtttcac atagcagccg actgggagaa ggtgtcggtg aattagcccg tcagatgtta
     4081 atgagtgata gttgtaaaat cgccattgcc gcgggaattg acgatccaca aaatcctatt
     4141 ggtaccgatg ccgtcaaagt gatggaggcc atcgaatctg ttgctgatgc cgaccatgtg
     4201 ctggtcatga tggatatggg tagcgcatta ttgagtgctg aaactgcgct ggaattgctg
     4261 gctcccaaga tcgccgcaaa agtacgtttg tgtgctgcgc cgttggtcga aggtacactg
     4321 gcagcaacgg tcagcgcggc ctcgggagcg gatatcgaca aagttatctt tgacgctatg
     4381 catgcgctgg aagccaaacg tgaacaactg ggtttaccgt cctccgacac tgaaatctct
     4441 gacacatgtc ctgcgtacga tgaagaagcc cgttctctgg cggtggtcat aaaaaaccgt
     4501 aacggcctgc atgtacgtcc ggcctcccgg ctggtttata ccttatcgac atttaatgcc
     4561 gatatgttgc tggaaaaaaa cggcaaatgc gtcacaccag agagtattaa ccagattgcg
     4621 ttactacaag ttcgctataa cgatacgctg cgcctgattg cgaaagggcc agaagctgaa
     4681 gaggcactga tcgctttccg tcagctggct gaagataact ttggtgaaac ggaggaagtc
     4741 gctccaccta ctctgcgtcc cgttccgcct gtttcgggta aagcctttta ttatcaacca
     4801 gttttatata cggtacaggc aaaatcaacc ctgaccgtgg aagaagaaca agatcgatta
     4861 cgccaggcta ttgacttcac gttattagat ctgatgacgt taacagcgaa agcagaagcc
     4921 agcgggcttg actatattgc cgcaatcttt tctggtcacc atacactgtt agatgatccg
     4981 gaactgctgg cggcggcaag cgaactcctt cagcatgaac attgcacggc agaatatgcc
     5041 tggcagcaag ttcttaaaga acttagccag caataccagc aactggatga tgaatatcta
     5101 caagctcgct atattgatgt ggacgatctt ctgcatcgca ccctggtcca cctgacccaa
     5161 acgaaagaag aactcccgca gtttaactcg ccaactattc tactggcgga gaacatttat
     5221 ccttccacag tactgcaact ggatccggcg gttgtaaaag gtatctgcct tagcgccgga
     5281 agtccggtat cccacagcgc cctaatcgcc cgtgaactgg ggattggctg gatttgccag
     5341 cagggtgaga aactgtatgc gatacaacca gaagaaacgc taacgctgga cgttaaaacg
     5401 caacgtttca accgtcaggg ttaagccact gttcggatgg catcgttctg atgtcatccg
     5461 gcaatttact cagcactaat ggtttttaac tacctgttat atttttcacc aatttatgat
     5521 gatttttctt cgctaatcac gaacccaacg ccgctggctg gctaataaac agacgttatt
     5581 tgatcactct atttcgccgt tatttatccc tttaattccc ttttctaaaa tgcctgacag
     5641 ttcgcagaat gagatttcga tcatgcagct agtgcgatcc tgaactaagg ttttctgata
     5701 cttgaatacc gttttattcg gtttcgccaa aggagaatga ttgatgaaat cccccgcacc
     5761 ttctcgcccg caaaaaatgg cgttaattcc a
//
LOCUS       DADMJE010000204         5622 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.207, whole genome shotgun sequence.
ACCESSION   DADMJE010000204 DADMJE010000000
VERSION     DADMJE010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5622)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5622)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5622
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.207"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            192..2602
                     /locus_tag="JN001_003769"
                     /pseudo
     CDS             192..2602
                     /locus_tag="JN001_003769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416104.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
     gene            2663..5086
                     /locus_tag="JN001_003770"
     CDS             2663..5086
                     /locus_tag="JN001_003770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416105.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit A"
                     /protein_id="HAY9054835.1"
                     /translation="MKIHTTEALMKAEISRRSLMKTSALGSLALASSAFTLPFSQMVR
                     AAEAPVEEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGDDVYGNHQVRACLRG
                     RSIRRRMNHPDRLKYPMKRVGKCGEGKFERISWDEALDTISDNLRRILKDYGNEAVHV
                     LYGTGVDGGNITNSNVPYRLMNSCGGFLSRYGSYSTAQISAAMSYMFGANDGNSPDDI
                     ANTKLVVMFGNNPAETRMSGGGVTYYVEQARERSNARMIVIDPRYNDTAAGREDEWLP
                     IRPGTDGALACAIAWVLITENMVDQPFLDKYCVGYDEKTLPANAPRNAHYKAYILGEG
                     PDGIAKTPEWAAKITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTSRAIAM
                     LSVLTGNVGINGGNSGVREGSWDLGVEWFPMLENPVKTQISVFTWTDAIDHGTEMTAT
                     RDGVRGKEKLDVPIKFLWCYASNTLINQHGDINHTHEVLQDDSKCEMIVGIDHFMTAS
                     AKYCDILLPDLMPTEQEDLISHESAGNMGYVILAQPATSAKFERKPIYWMLSEVAKRL
                     GPDVYQTFTEGRSQHEWIKYLHAKTKERNPEMLDYEEMKTTGIFKKKCPEEHYVAFRA
                     FREDPQANPLKTPSGKIEIYSERLAKIADTWELKKDEIIHPLPAYTPGFDGWDDPLRK
                     TYPLQLTGFHYKARTHSSYGNIDVLQQACPQEVWINPIDAQARGIRHGDTVRVFNNNG
                     EMLIAAKVTPRILPGVTAIGQGAWLKADMFGDRVDHGGSINILTSHRPSPLAKGNPSH
                     SNLVQIEKV"
     gene            5097..5622
                     /locus_tag="JN001_003771"
                     /pseudo
     CDS             5097..5622
                     /locus_tag="JN001_003771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000213046.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; frameshifted;
                     incomplete; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
BASE COUNT         1525 a         1425 c         1413 g         1259 t
ORIGIN      
        1 actgaacgcc ggatatgaca catccggcga tttgaacata caacataatc ccaccttatt
       61 actcataccc ttctattgat gtggattaat aattcttaac ccaaaatggg tagccccccc
      121 cctctattgt tagcgcgcta aatattcaat acataaacat ttatataacg ataaagaaca
      181 gggagtgagt tatgtccaaa aatgaccgaa tggtgggcat cagccgcaga acactcgtta
      241 aatcaaccgc gataggttct ctggcgctgg ctgcaggcgg tttttcttta ccgttcaccc
      301 tgcgcagtgc agcggcaacg gtacaacagg ccagcgaaaa agtgatctgg ggtgcctgtt
      361 ccgtcaactg tggtagccgc tgtgcacttc gtctacatgt taaagataat gaagtgacct
      421 gggtggaaac tgacaatacc ggcagcgatg agtacggcaa ccatcaggta cgcgcctgtt
      481 tgcgcggtcg ctccatccgc cggcgtatta atcatcccga tcgcttgaat tacccaatga
      541 aacgcgtggg taaacgcggt gaaggcaaat tcgaacggat tagctgggat gaagccctgg
      601 atactatcgc cagtagcctg aaaaaaaccg tcgaacaata tggcaatgag gctgtatata
      661 ttcagtactc ttcggggatt gttggcggca atatgacccg ctcttcgcca tcagcctcgg
      721 cggtcaaacg cctgatgaac tgctacggcg gttcactcaa tcagtatggc tcctacagca
      781 ccgcacaaat ttcctgtgcc atgccctaca cctacggcag taatgatggc aacagcacca
      841 cggatattga aaacagcaag ctggtcgtga tgtttggtaa caacccggca gaaacccgca
      901 tgagcggcgg tggcatcact tatcttcttg aaaaagcgcg cgagaaatcg aacgccaaaa
      961 tgattgttat cgatccgcga tataccgata cggctgctgg tcgtgaagat gaatggcttc
     1021 ctattcgccc gggcaccgat gccgcgctgg ttgcgggtat tgcctgggta ttgattaacg
     1081 aaaatctcgt tgatcaacct tttctcgata aatactgcgt cggctatgac gaaaaaacct
     1141 tacccgcaga tgcaccaaaa aatggtcact ataaagccta tattcttggt gaaggtgatg
     1201 ataatacagc gaaaacgccg cagtgggctt cgcaaattac cggtatcccg gtggaccgta
     1261 tcatcaaact ggcgcgtgaa attggcacag caaaacccgc ttatatctgc cagggctggg
     1321 ggccgcaacg ccaggcaaac ggcgaactga ctgcacgcgc tattgctatg ttgcctattt
     1381 tgacgggcaa tgtcggcatc agcggcggaa atagtggcgc gcgtgaatcg acctatacca
     1441 ttaccataga acgcctgccg gtgctggata atccggtcaa aacgtcaatc tcctgcttca
     1501 gctggacaga tgctatcgat catggtccgc aaatgacggc aatccgcgac ggcgtccgcg
     1561 gcaaagataa actggatgtg cccattaagt tcatctggaa ctacgcggga aataccctcg
     1621 ttaatcagca ttctgacatc aacaaaacgc atgaaattct gcaggacgaa tcgaaatgcg
     1681 aaatgattgt ggtcatcgaa aactttatga cctcatcggc aaactgccag acctgatgac
     1741 cgttgagcag gaagatatta ttcctaacga ctacgccggt aacatgggat atctcatttt
     1801 cctccagcct gtcaccagcg aaaaattcga acgcaaaccg atttactgga tcctgagtga
     1861 agtcgcgaaa cgtcttggac ctgacgtcta tcaaaagttc acagaaggtc gcacgcagga
     1921 acaatggtta caacatctgt acgccaaaat gcttgccaaa gatccggcgt taccgtctta
     1981 cgacgaactg aaaaaaatgg gtatctataa gcgtaaagat cccaatggcc attttgtcgc
     2041 ctacaaagca tttcgtgacg accccgaggc aaatccactt aaaacgcctt ccggtaagat
     2101 tgaaatttat tccagcaggc tggcggaaat tgcccgtacc tgggaactgg aaaaagatga
     2161 agtgataagc ccattgccag tttatgcctc aacctttgaa ggctggaact cccctgaacg
     2221 tagaaccttc ccactgcaac tgtttggttt ccattacaaa tcccgtactc actcgaccta
     2281 cggcaatatt gatctcctga aggctgcctg ccgtcaggag gtgtggatca accctataga
     2341 tgcgcagaaa cgtgggattg ccaacggcga tatggtgcgg gtgtttaacc atcgtggcga
     2401 agttcggcta ccagccaaag taacaccacg tattctccct ggagttagcg ctatgggcca
     2461 gggagcctgg cacgaggcca atatgtctgg cgataaaatc gaccatggcg gctgtgtgaa
     2521 tacgctaacc actctgcgcc cttcaccact ggcgaaggga aacccgcagc acactaatct
     2581 ggtcgagatc gaaaaaatat aacccacgac aaccataaat tctggcatga cattttgttt
     2641 gaaaagcaat aagtgagtaa tgatgaaaat ccataccaca gaggcgctca tgaaggctga
     2701 aatcagccgt agaagtctga tgaaaacctc cgcacttggc agtcttgcgc tggcaagcag
     2761 tgctttcact ctgccatttt cccaaatggt ccgggcggca gaggctccgg tagaagagaa
     2821 agcggtctgg agttcctgca ccgttaactg cgggagccgc tgtctgttac gtttgcatgt
     2881 gaaagatgac accgtgtact gggtggagtc tgatacgaca ggtgacgacg tctacggtaa
     2941 tcatcaggtt cgagcgtgtt tacgcgggcg ctctatccgc cgacggatga atcatcctga
     3001 taggttgaaa tatcccatga agcgcgtcgg caagtgcggt gaaggtaaat ttgaacggat
     3061 aagttgggac gaagccctgg ataccatcag tgataatctt cggcggatcc tgaaagatta
     3121 cggcaatgag gctgtacatg tcctgtacgg aacaggcgta gatggcggaa acatcaccaa
     3181 ctcaaacgtc ccgtaccgtc tgatgaactc ttgcggtggt tttctcagtc gctatggcag
     3241 ctacagtacc gcacagatca gtgccgcaat gagttatatg ttcggtgcca atgatggcaa
     3301 cagcccggat gatatcgcca atacgaaact ggtcgttatg ttcggaaata acccggcaga
     3361 aacgcggatg agcggcggtg gtgtcactta ctacgtcgag caagcccgcg aacgttcaaa
     3421 cgcacgcatg atcgtcatcg atccacgtta taacgacact gctgccgggc gtgaagatga
     3481 atggctgcct attcgccctg gcaccgatgg cgcactggcc tgtgcgattg cctgggtact
     3541 gattactgaa aacatggtcg atcagccatt tctcgacaaa tattgtgttg gttacgatga
     3601 aaaaacgctg cccgccaacg caccacgtaa cgcgcattat aaagcctata ttctgggcga
     3661 agggcctgac ggcatagcta aaacgccgga atgggcagca aaaatcacca gcatcccggc
     3721 agaaaaaatt atccagttgg cgcgagagat cggttcagca aaacctgctt atatttgtca
     3781 gggttggggg ccacaacgac attccaacgg cgagcaaacg tcccgcgcta ttgccatgct
     3841 ttccgttctc accggtaacg ttggcataaa cggcggcaac tcaggtgtac gcgaaggtag
     3901 ctgggatctg ggggtagaat ggttcccgat gcttgagaat cctgttaaaa cgcagatttc
     3961 cgtctttaca tggacagatg ccatcgacca tggtacggaa atgaccgcga cccgtgatgg
     4021 tgttcgtgga aaagaaaaac tggatgtccc catcaagttt ttatggtgct acgccagtaa
     4081 cacattgatc aatcaacatg gcgacatcaa tcacacccat gaggtgcttc aggatgacag
     4141 caagtgcgag atgattgttg gcattgacca cttcatgacg gcctcggcta agtattgcga
     4201 tatcctgttg cccgacctga tgccaacaga gcaagaagac cttatctctc atgaatctgc
     4261 agggaatatg ggctatgtga tcctcgccca acccgcaacc tcagcaaaat ttgaacgcaa
     4321 acccatctac tggatgctga gtgaagtcgc caaacgctta ggaccagacg tttatcaaac
     4381 ctttactgaa ggtcgcagtc agcatgaatg gatcaaatat ctccatgcga aaacgaagga
     4441 acgtaaccct gagatgctcg actacgagga gatgaaaacg accgggatct ttaagaaaaa
     4501 atgcccggaa gaacactacg tcgctttccg cgcattccgt gaagatccac aggcaaaccc
     4561 gttgaaaaca ccttcgggga aaatcgaaat ttattctgaa cgactggcga agattgcaga
     4621 tacctgggaa ttgaaaaaag atgaaattat tcatcccctt cctgcgtata ccccaggttt
     4681 tgatggctgg gacgatcccc tgcggaaaac ctatccactg cagttaacgg gcttccacta
     4741 caaagcgcgt acccactcca gctacggcaa tattgatgtg ttacagcagg cctgcccaca
     4801 agaggtgtgg atcaacccca ttgatgctca ggcacgcggt atccgtcatg gcgataccgt
     4861 gcgggtattt aacaataatg gagaaatgct gattgccgca aaagtgactc cgcgtattct
     4921 gcctggcgtt accgccatcg ggcaaggtgc gtggcttaaa gcggatatgt ttggtgaccg
     4981 ggtcgatcac ggcggcagta tcaatattct gacctctcac cgcccttcac cgctggcaaa
     5041 gggaaacccg tcgcacagca atcttgtcca gatcgaaaag gtttaaggag tagcccatga
     5101 ccacacaata tggatttttt atcgattcca gccgctgtac tggctgtaaa acctgcgaac
     5161 tggggtgcaa agattttaaa gatcttggcc cggaagtcag tttccgccgt atttatgaat
     5221 atgctggcgg cgactggcag gaagataatg gcatctggca ccagaacgtg tacaaaagtc
     5281 tgccccagcg gcgcaatgca taagcgtgaa gatggctttg tggtggttga tgaagatgtt
     5341 tgtatcggct gccgctactg ccacatggct tgtccgtacg gcgcaccaca gtacaatgct
     5401 gaaaaagggc acatgacgaa gtgcgatggt tgttattcgc gcgtcgccga ggggaaacaa
     5461 cccatatgca tcgaatcctg cccgctgcgt gcacttgagt tcggtccaat tgaagagctg
     5521 cgccagaagc acggcactct ggctgccgtc gcgccactgc cgcgcgcgca tttcacaaaa
     5581 cccaatatcg ttatcaaacc taacgccaac agccgcccga cc
//
LOCUS       DADMJE010000205         5614 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.208, whole genome shotgun sequence.
ACCESSION   DADMJE010000205 DADMJE010000000
VERSION     DADMJE010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5614)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5614)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5614
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.208"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(104..179)
                     /locus_tag="JN001_003772"
     tRNA            complement(104..179)
                     /locus_tag="JN001_003772"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(144..146),aa:Val,seq:tac)
     gene            complement(224..299)
                     /locus_tag="JN001_003773"
     tRNA            complement(224..299)
                     /locus_tag="JN001_003773"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(264..266),aa:Val,seq:tac)
     gene            559..1974
                     /gene="gltX"
                     /locus_tag="JN001_003774"
     CDS             559..1974
                     /gene="gltX"
                     /locus_tag="JN001_003774"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HAY9054836.1"
                     /translation="MKIKTRFAPSPTGYLHVGGARTALYSWLFARNHGGEFVLRIEDT
                     DLERSTPEAIEAIMDGMNWLSLEWDEGPYYQTKRFDRYNAVIDQMLEEGTAYKCYCSK
                     ERLEALREEQMAKGEKPRYDGRCRHSHEHHADDEPCVVRFANPQEGSVVFDDQIRGPI
                     EFSNQELDDLIIRRTDGSPTYNFCVVVDDWDMEITHVIRGEDHINNTPRQINILKALK
                     APVPVYAHVSMINGDDGKKLSKRHGAVSVMQYRDDGYLPEALLNYLVRLGWSHGDQEI
                     FTREEMIKYFTLNAVSKSASAFNTDKLLWLNHHYINALPPEYVATHLQWHIEQENIDT
                     RNGPQLADLVKLLGERCKTLKEMAQSCRYFYEDFAEFDADAAKKHLRPVARQPLEVVR
                     DKLAAITDWTAENVHHAIQATADELEVGMGKVGMPLRVAVTGAGQSPALDVTVHAIGR
                     TRSIERINKALAFIAERENQQ"
     gene            complement(2025..2396)
                     /locus_tag="JN001_003775"
     CDS             complement(2025..2396)
                     /locus_tag="JN001_003775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY9054837.1"
                     /translation="MTTEELAECLGVAKQTVNRWIREKGWKTEKFPGVKGGRARLILV
                     DTQVCEFIQNTPAFHNTPMLMEAEERIAEYAPGVRAPAYRQIINAIDNMTDIEQEKVA
                     QFLSREGIRNFLARLDIDESA"
     gene            complement(2419..2763)
                     /locus_tag="JN001_003776"
     CDS             complement(2419..2763)
                     /locus_tag="JN001_003776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708260.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding transcriptional regulator"
                     /protein_id="HAY9054838.1"
                     /translation="MTPDELARLTGYSRQTINKWVRKEGWTTSPKPGVQGGKARLVHV
                     NEQVREYIRNAERPEGQGEAPALSGDAPLEVLLVTLAKEMTPVEQKQFTSLLLREGII
                     GLLQRLGIRDSK"
     gene            2999..3074
                     /locus_tag="JN001_003777"
     tRNA            2999..3074
                     /locus_tag="JN001_003777"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3032..3034,aa:Ala,seq:ggc)
     gene            3114..3189
                     /locus_tag="JN001_003778"
     tRNA            3114..3189
                     /locus_tag="JN001_003778"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:3147..3149,aa:Ala,seq:ggc)
     gene            3398..5587
                     /locus_tag="JN001_003779"
     CDS             3398..5587
                     /locus_tag="JN001_003779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor domain-containing phosphodiesterase"
                     /protein_id="HAY9054839.1"
                     /translation="MFVEHNLIKNIKIFTLAFTLTVVLIQLSRFISPLAIIHSSYIFL
                     AWMPLCVMLSILFIFGWRGVVPVLCGMFCTNLWNFHLSFLQTAVMLGSQTFVVLCACA
                     ILRWQLGTRWRYGLTSRYVWQRLFWLGLVTPIGIKCSMYLVGSFFDFPLKISTFFGDA
                     DAIFTVVDLLSLFTAVLIYNMLFYYLTRMIVSPHFAQILWRRDIAPSLGKEKRAFTLS
                     WLAALSVLLLLLCTPYENDFIAGYLVPVFFIIFTLGVGKLRYPFLNLTWAVSTLCLLN
                     YNQNFLQGVETEYSLAFILAVLISFSVCLLYMVRIYHRSEWLNRRWHLQALTDPLTLL
                     PNFRALEQAPEQEAGKSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQENEK
                     LYQLPGSELLLVLSGPETEGRLQHMVNILNSRQIHWNNTGLDMGYGAAWGRFDGNQET
                     LQPLLGQLSWLAEQSCAHHHVLALDSREEMVSGQTTKQVLLLNTIRTALDQGDLLLYA
                     QPIRNKEGEGYDEILARLKYDGGIMTPDKFLPLIAQFNLSARFDLQVLESLLKWLATH
                     PCDKKGPRFSVNLMPLTLLQKNIAGRIIRLFKRYHISPQAVILEITEEQAFSNAESSM
                     YNIEQLHKFGFRIAIDDFGTGYANYERLKRLQADIIKIDGVFVKDIVTNTLDAMIVRS
                     ITDLAKAKSLSVVAEFVETQQQQALLHKLGVQYLQGYLIGRPQPLAD"
BASE COUNT         1308 a         1359 c         1433 g         1514 t
ORIGIN      
        1 cgaaccgccg accccctcct tgtaagggag gtgctctccc agctgagcta atcacccact
       61 tcggtacttc acattgttac aagaaattta gctggtgaga aagtggtggg tgatgacggg
      121 atcgaaccgc cgaccccctc cttgtaaggg aggtgctctc ccagctgagc taatcaccca
      181 cttctcaatt tcttgctaca cggcggagac tacataaagt agttggtggg tgatgacggg
      241 atcgaaccgc cgaccccctc cttgtaaggg aggtgctctc ccagctgagc taatcacccc
      301 ccgctgtgtg gagtcgcatt atagggagag ttcaaaatga gtcaacgcat tttctaaaga
      361 aattgttcgt tcgtcgtaaa tttaagcaag atgatcgcaa aatagaccgt gttgcgcaat
      421 ttgtcaacga aaacaataat gcgtaaggta gaaacccgaa ctacattgag gaatcaggcg
      481 ggagtgatag aatatcgccc actcaatttt tccaggattt gccggttgtc ggcatctttc
      541 taaacgtaag gccatttcat gaaaatcaaa actcgcttcg cgccaagccc aacaggctat
      601 ctgcacgttg gcggcgcgcg tactgccctt tactcctggc tttttgcacg taaccacggc
      661 ggtgagttcg tgctgcgtat tgaagacacc gatcttgagc gttccacgcc ggaagctatc
      721 gaagccatta tggatggcat gaactggctg agcctggagt gggatgaagg tccgtactac
      781 cagaccaaac gttttgatcg ctacaacgcg gtgatcgatc agatgctgga agagggcact
      841 gcttataaat gctattgctc taaagagcgc ctggaagcgc tgcgcgaaga gcaaatggcg
      901 aaaggtgaga agccgcgtta tgacggtcgc tgccgccaca gccatgagca tcacgctgat
      961 gatgaaccgt gcgttgtacg ttttgctaac ccgcaggaag gttctgttgt ttttgacgat
     1021 cagatccgtg gtccgatcga gttcagcaac caggaactgg acgatcttat tattcgccgt
     1081 accgatggtt ccccaaccta taacttctgt gtggttgtcg atgactggga tatggaaatc
     1141 acccacgtta tccgtggcga agaccatatc aacaacacgc cacgccagat caacattctt
     1201 aaggccctga aagcgccggt gccggtttac gcgcacgttt ctatgatcaa cggcgatgac
     1261 ggtaaaaaac tgtccaaacg tcacggggcg gtcagcgtaa tgcagtatcg tgatgacggt
     1321 tatttgccag aagcactgct gaactatctg gtgcgtctgg gctggtccca cggcgatcag
     1381 gaaatcttca ctcgtgaaga gatgatcaaa tacttcaccc tgaatgccgt cagcaaatct
     1441 gccagtgcgt tcaacaccga caagctgctg tggctgaacc atcactacat taacgcgctg
     1501 ccgccggagt atgttgctac tcacttacag tggcacattg agcaggaaaa tatcgatacc
     1561 cgtaacggcc cgcagctggc tgatctggtg aaactgctgg gcgaacgctg caagacgctg
     1621 aaagagatgg cacagagctg ccgttatttc tacgaagatt ttgctgagtt cgatgccgac
     1681 gccgcgaaaa aacatctgcg tccggtagcg cgtcagccgc tggaagtggt tcgtgacaaa
     1741 ctggccgcga ttactgactg gaccgctgaa aacgttcatc acgctattca ggcgacggcg
     1801 gatgagctgg aagtgggtat gggtaaagtt ggtatgccgc tgcgtgtcgc cgtaaccggt
     1861 gcggggcagt ctccggcact ggatgttacc gttcacgcaa ttggtaggac ccgcagtatt
     1921 gagcgtatca acaaagcgct ggcttttatt gctgaacgcg aaaaccagca gtaattagcg
     1981 cataaaagat aaacggcagg agataatatc ctgccgtttt ttatttatgc tgattcgtca
     2041 atatcgagac gggcgaggaa attgcgaatt ccttcacgtg acaaaaattg cgcgactttt
     2101 tcctgctcaa tgtctgtcat attatctatc gcgttgatga tttgtcgata cgccggggcg
     2161 cgtactccag gagcgtattc agcaattctc tcttcagctt ccatcaacat tggtgtgtta
     2221 tggaaggctg gcgtgttctg aataaactcg caaacttgcg tatcgaccag aataagtctg
     2281 gcacgaccgc ctttcacgcc gggaaatttt tccgttttcc agcctttttc tctgatccaa
     2341 cggttaacag tttgtttagc cacaccgagg cattcagcca gttcttcggt ggtcatttta
     2401 ttgcgtaatc ttttcatatt atttgctatc gcgaatccct aagcgttgta acaatccgat
     2461 aatcccttcc cgcagaagca aggatgtaaa ctgtttttgt tcaactggcg tcatctcttt
     2521 cgccagtgtc accagcaata cttcaagcgg cgcatcacca gaaagggcag gcgcttctcc
     2581 ctgaccttct ggacgttcag cattgcgaat atattcacga acctgttcat tgacgtgaac
     2641 cagtcgggct ttgccaccct ggacgccagg ttttggtgac gttgtccagc cttccttgcg
     2701 tacccattta ttaatggtct ggcggctata gccggtcagt ctggcaagtt catctggtgt
     2761 catcctctcc ttgaacataa caattccctg aatgtatgtg ggtctattag tagttcattt
     2821 tataacacca ctttacagga aaccgtgaca tgaataacta ctgaatgcga gcggttttcc
     2881 aaaattgttc atttgcctga tttttcagcg attgaaacta cacgttgcaa tttgccgttg
     2941 acacattcgg gcggaattca tatgatgccg cccgtcaact cgacaagctt tacgtgacgg
     3001 ggctatagct cagctgggag agcgcttgca tggcatgcaa gaggtcagcg gttcgatccc
     3061 gcttagctcc accaaatttt gcacccagca aatttggtac gtaaacgcat cgtggggcta
     3121 tagctcagct gggagagcgc ttgcatggca tgcaagaggt cagcggttcg atcccgctta
     3181 gctccaccaa atttccaacc ctcgctgcaa agcgggggtt ttttgtctct gctttttgcc
     3241 gcttttgtaa tacagtctac gtccgggtta gtgccgcctg gtgaaagcat cattggatga
     3301 aaaatcggca acaggctggc cccctgtttg cttcgcgatg cgaataaact tattatttgt
     3361 gtgcctgaaa actccgatca gtgagagtag tgtactcatg tttgtggagc ataacctgat
     3421 aaaaaatatc aagatattca cactagcgtt tacgctcacc gtggtactta ttcagctatc
     3481 ccgttttatt tcgccacttg ccattatcca ttccagttat atctttctgg cgtggatgcc
     3541 actgtgcgta atgctgtcaa tcttgtttat ctttggctgg cgaggtgtcg ttcccgtttt
     3601 atgcgggatg ttttgcacca atctgtggaa ctttcatctc tcttttttac agactgcggt
     3661 catgctcggt agccagacgt ttgtcgtgtt gtgtgcctgc gcaatattac gctggcagct
     3721 ggggacgcgt tggcgttatg gattgaccag ccgatatgtc tggcaacgtc tgttctggct
     3781 tggtttggtg acgccgatcg gcatcaaatg cagcatgtat cttgtgggga gcttctttga
     3841 tttcccgcta aagatatcca cctttttcgg cgatgcggat gccattttca cggtcgttga
     3901 tttgctaagc cttttcaccg ctgtgctgat ttacaacatg cttttctact atctcactcg
     3961 catgattgta agtccccact ttgcgcagat attgtggcgc agggatatcg cgccgtcgtt
     4021 gggcaaagag aaacgcgcat ttaccttaag ctggctggca gcgttaagcg tgcttctact
     4081 tctgttgtgc acaccttatg aaaacgactt tattgccggt tacctggtac ccgttttctt
     4141 catcatcttt accctcgggg tcggtaagct tcgctatccg tttttaaatc tcacctgggc
     4201 tgtttcaacg ctttgccttc tgaattacaa ccagaacttt ttgcaagggg tggaaaccga
     4261 atattcgctg gcatttattc ttgcggtgct gatttccttt agcgtttgcc tgctctatat
     4321 ggtgcgcatt tatcatcgca gtgaatggct taatcgccgc tggcatttgc aggcgctgac
     4381 cgatccgtta acgctcctgc ccaacttccg tgcgttggaa caagcgccgg agcaagaggc
     4441 gggcaagagt ttttgctgcc tgcgcattga taatcttgag tttatgagtc gtcattacgg
     4501 cttaatgatg cgcgttcact gtatccgctc aatttgccgt acgctgctgc cgttgatgca
     4561 ggaaaacgaa aagttgtatc aattgccggg tagtgaactg ctgttagtgc tgagcgggcc
     4621 ggaaacggaa gggcgactcc agcatatggt taacatcctg aatagtcggc aaattcactg
     4681 gaacaatacc gggctggata tgggctatgg tgctgcctgg gggcgttttg atggaaatca
     4741 ggaaaccctg caacccttgt tggggcagtt aagctggctg gcggagcaat cctgcgcaca
     4801 tcatcatgtg ctggcgctgg atagcagaga ggagatggtt tccgggcaga ccactaaaca
     4861 ggtgctattg ctgaatacca ttcgcacggc gttagatcag ggtgatttgc tgctctacgc
     4921 ccagccaatt cgcaacaaag agggtgaagg ttatgatgag atcctcgcgc gactgaaata
     4981 tgacggcggc attatgaccc cggataagtt tctgcccctt attgctcagt ttaaccttag
     5041 cgcgcgtttt gatttgcaag tgctggaatc cttgttgaag tggctggcaa cacacccttg
     5101 cgacaaaaaa ggaccgcgct tttcagtcaa tttaatgccg ctcacgctgc tgcaaaagaa
     5161 tattgccggg cggattattc gtctgtttaa gcgttatcac atctccccgc aggcggtcat
     5221 tcttgagatc accgaggagc aggcgttttc taacgcagaa agcagcatgt acaacatcga
     5281 gcagctgcat aagtttggtt tccggattgc gattgatgac tttggcaccg gctatgccaa
     5341 ctacgaacgg ttaaagcgtt tgcaggctga tatcatcaaa attgatggcg tctttgtgaa
     5401 agatattgtc acgaacacgc tggatgcgat gattgtgaga tcaattaccg atctggcgaa
     5461 agcgaagtca ttgagtgtgg tcgcggagtt tgtcgagacg caacagcagc aggcgctatt
     5521 gcataagctc ggggtgcaat atctgcaagg gtatttgatt ggtcgcccgc agccattagc
     5581 tgattaacag gcgtaaaaaa accggggaat tatc
//
LOCUS       DADMJE010000206         5595 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.209, whole genome shotgun sequence.
ACCESSION   DADMJE010000206 DADMJE010000000
VERSION     DADMJE010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5595
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.209"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..401)
                     /locus_tag="JN001_003780"
     CDS             complement(<1..401)
                     /locus_tag="JN001_003780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000511771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY9054840.1"
                     /translation="MGILEQEMKRLAQQAGGSHKTVHDRIKLVQRFCERLVLAQNVQI
                     RRVEQLKARYIEGYVRERLAQGITKRSLQNEMAAVRCILKQAGRDRLAQSERLNNRSL
                     GLSGASRNGTKRAITPEHYRHVLETARAKDPG"
     gene            complement(1266..1583)
                     /locus_tag="JN001_003781"
     CDS             complement(1266..1583)
                     /locus_tag="JN001_003781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016161430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HAY9054841.1"
                     /translation="MDRGEIWLVSLDPTTGHEQSGKRPVLIVSKASFNTFTRLPVVVP
                     VTSGGNFAREAGFTVSLDGAGTKTTGVIRCDQPRTIDMGARSGKRLERIPDAVVNEVL
                     ARL"
     gene            complement(1584..1841)
                     /locus_tag="JN001_003782"
     CDS             complement(1584..1841)
                     /locus_tag="JN001_003782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000288814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HAY9054842.1"
                     /translation="MYTTRLKKVGGSVMLAVPPAVLKTLGLSTDSEVGMTIDNGCLII
                     EPQKRPRYSLEELLAQCDPHAEISEEGREWIDAPAVGKEIL"
     gene            complement(2190..2396)
                     /locus_tag="JN001_003783"
     CDS             complement(2190..2396)
                     /locus_tag="JN001_003783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003842122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9054843.1"
                     /translation="MMLQDWHPADIIAGLKKRGTSLSALSRQAGLASSTLANALTRRW
                     PKGERLIAEALGIKPEQIWPSRYR"
     gene            complement(2393..2854)
                     /locus_tag="JN001_003784"
     CDS             complement(2393..2854)
                     /locus_tag="JN001_003784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012822469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054844.1"
                     /translation="MATIPTQTHPLLAVPFSAATDFTVLADHCENVAETLIESEDPVL
                     RLALCGRLAACLTLLQPTLNDPIPSHLTDSLTVDALPADMPRFVPDAELLCDYSLTLA
                     QLLIGQGMQPKVEQTITGLLCELVWYFAAEMKAPRWLRTADGVKFIDEVAA"
     gene            complement(3225..4829)
                     /locus_tag="JN001_003785"
     CDS             complement(3225..4829)
                     /locus_tag="JN001_003785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016239422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054845.1"
                     /translation="MITKELVDESNFISQLVDIGRFDESYQQSVAFLNKLERITIRND
                     NYFIVLANIAGALVDIGQMQNNKNASELGCNLMEDNKEAFISVLGECLYYYNYGNALS
                     NLVSITNPNDHTFKSIEELVSLKNIYWRSFKLSAEEQEEFQAELSVNLANSLRSQFRL
                     SESLRYYDLTNLKGLDIPQAWVNRSMSLMVLNLISSSFSIKLLKEVRAGYIKASVSKN
                     IPPQWESFYLERIAQTNEKIAEYAVDDETDEHDEALTQQEFEVLSPYRQFCLRNHLTL
                     SEHGLYCPCVGSATDDLVIASRGGVTGDFIIPMEMVLNRLKSEFSLARHLYFDYLHPQ
                     NTDYIKYESHFLELYNDEVLGIEIEKIRTAFRLCFGILDKIAVAICELYNLYPTTKKG
                     TPQKNIYFQNFWQLDVDNRRQLFEKVKSPGLLALYSIATDLNKDKGGELAFYKEWRNG
                     LEHKFLVVHKSDKPEDIYESYQLIEDILFIKESDFIHHFEHLLQITRSAIFSFAFMVR
                     QEGMKEKKEGIHYMTRELHAINYSAD"
     gene            complement(4842..5207)
                     /locus_tag="JN001_003786"
     CDS             complement(4842..5207)
                     /locus_tag="JN001_003786"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054846.1"
                     /translation="MVSDKRADIIVSLPQIKIPIEIKRDYHRDVWTALNGQLDKLYTK
                     NPDAAGHGIYLVFWFGSARPNSLPHLAKNTSQPENASAMENMLNETVPVDKRDRLSAI
                     VIDVSCEGIPPVEAPKSSV"
     gene            complement(5235..5444)
                     /locus_tag="JN001_003787"
     CDS             complement(5235..5444)
                     /locus_tag="JN001_003787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001044500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054847.1"
                     /translation="MNKTPANIMDLYSLLLDHIRDISNRIANENTDIYKQFWNEDSYG
                     RTLTPKPEESCRNIFLDLLRVRLNP"
BASE COUNT         1447 a         1346 c         1306 g         1496 t
ORIGIN      
        1 cccggatctt ttgcgcgggc ggtttccagc acatggcggt aatgctccgg cgtgatggcc
       61 cgcttcgtac cgttacggga tgcgccagac aggcccagcg agcggttatt cagtcgctca
      121 ctctgcgcca gcctgtcacg cccggcctgt ttcagaatgc agcgcaccgc cgccatctca
      181 ttttgcaggg aacgcttcgt gataccctgc gccagtcgtt cacgaacata tccctcaata
      241 taccgcgcct taagctgctc cacccggcgg atctgcacat tctgtgccag aaccagacgc
      301 tcacaaaacc gctgcaccag cttaatacgg tcgtgaacgg tcttatggct gccgcccgcc
      361 tgttgtgcca atcgcttcat ttcctgctcc agaatcccca tacattcccc ctttcatgat
      421 tgccgcaaac tcatccccaa aaactcaaca ctgatacagc gttccccggc gcacaggccg
      481 atagcccctg agttttgtcg gggctgcgaa cgatacctga gcgccggggc ggcagccgtt
      541 gaggtgtggt ggggcttcgg ttgtgctctc agagcagccg cccgcttgcg cgggtcatcc
      601 cccggatcgt ccagatccgc ctcggtatcg gttcatattc tccttatggg taaatggcct
      661 aaaaaggcgg tgtcagaatc cagccatgag ctggcgcagt tgagttttct ggtgcaggtc
      721 gaaagggctt gcgtgcgtca ctttcccgct ttgcgcggtt aaagtgacgc acggatctgg
      781 tgcagcatct gagatttatc gtctggtgca gttttacggt cacgcggcag caaagcctga
      841 cggcaatgca ggccgcagcc cgtaaggtaa aaggcgctga gggtgtcagc agatgcaggt
      901 tagccgggag aattccggcg cggtgcagat tcagaccagc aggctggcga agtaaaagga
      961 tgtatcgtat taaaactctg gcctccgtcg cgatgttctg cgacccggtg tttgcagagg
     1021 tctgcaccgg taaacggatc gaccgtcctg ataacaggcg cttctttcag gttgtgaagc
     1081 gttgggcgct gtctacgaca gcatagagca agggggagac tacgcctgtg ccgctggcgc
     1141 ggaaaggaga aactgttttt acctgcaaaa ggatttttta atcacttgtt gttataaaaa
     1201 atgagggcgc tgtatgtgac agcgccctcg ttcaggttac ataaaaaata tcagctcaga
     1261 atagcttaca gtcgagccag cacctcattc acgacagcat cgggtatacg ttccagccgc
     1321 ttaccgctcc gagctcccat atcaatggtt ctgggctggt cgcagcgaat aacgcccgtt
     1381 gtttttgttc ccgccccgtc cagtgaaacg gtaaaaccgg cttcgcgggc aaagtttccg
     1441 ccgctggtga cagggacaac aacaggcaac cgggtgaacg tgttaaacga tgccttcgat
     1501 acgatgagta ccggacgttt tccactttgt tcatggccag tggtgggatc cagtgaaacg
     1561 agccagattt ctcctctgtc catctacagg atctccttgc ccaccgcagg cgcatcaatc
     1621 cattcccgac cctcttcgct tatttcagcg tgcggatcgc actgcgccaa cagttcttcg
     1681 agcgaatagc ggggacgttt ttgaggttca ataatcaggc agccattatc aatggtcatg
     1741 cccacttcgc tgtccgtcga cagccctagc gttttcagca ctgcgggggg aaccgccagc
     1801 atgacggatc cgccaacctt tttcaggcga gtggtataca tagagcacct ccggatatta
     1861 tattttaata taacatccat gatagacgat gcacaactat tcatcagatt cattgtggtt
     1921 tccttagtgt aataaagcgt gaagaaagcc ttaatccatc ggaagacaga tccggcagtt
     1981 ttcaaaggcg acattgccgg taaaagggca accgtcctga tacatcaggc gcttctttca
     2041 ggtcatgaag catttcgtac aggcgggagc ttagtgcgta acaaagaagg ccgataatag
     2101 gaaactgctt ttgcagttca aaggattatg acggttcgga taaacaaaat gcggcgcagc
     2161 ttccgtatcc gggctgcgcc gcaggaacat cagcggtagc gcgaaggcca gatttgctca
     2221 ggcttgatgc ctaacgcttc ggcaattaac ctttcgcctt tgggccagcg gcgggtaagc
     2281 gcattagcca gcgtggagga cgccagacct gcctgacgcg aaagcgctga cagcgaagtg
     2341 cctcgttttt tcagcccggc gataatgtcg gcaggatgcc agtcctgcag catcatgcag
     2401 ccacctcgtc gataaacttc acgccatcgg cggtgcggag ccagcgcggg gctttcattt
     2461 cggcggcaaa ataccagacc agttcacata ataagcctgt tatcgtctgc tccacttttg
     2521 gctgcatccc ctgcccgata agaagttgcg ccagcgtcag tgagtaatca caaagtaatt
     2581 ctgcgtcggg gacaaatcgg ggcatatcgg caggtagagc atcaacggtc aggctgtcag
     2641 tcagatgaga cgggatgggg tcgttcagcg tgggttgcag caaagtgaga caggcggcaa
     2701 gtcgcccgca aagcgccagc cgcagcaccg gatcttcgct ttcgatcagg gtttcggcga
     2761 cgttttcgca gtggtctgcc agtacggtaa aatctgtggc agcactgaag ggaacagcaa
     2821 gtaacgggtg tgtctgagtg gggatcgtag ccataaaggc agcctccagt atgtggtttg
     2881 aaaaccacca ccagaggttc caatctcatg ggtggtggac tgaacgaggt tggaactacc
     2941 ggccatactg gaaccggcgc accttacggt gcccccgccc agcccaccat aattttggtg
     3001 tagctaagcg cgcgacataa aaaaagacgc agacgcgtca cgtgtcgcca gtatggttat
     3061 atttcggggt tccaatcccg gcacctgatt ttgcaggtgc gggtaaaaga taccgctttc
     3121 ggttgaaaac ggcaagggga agtcgtggaa tagagatcgc agattgttat aaatatacac
     3181 aatagttaat gttaacaaag acggcacata tattaacttt actctcaatc tgctgaatag
     3241 tttatcgcat gtaattctcg ggtcatatag tggataccct ccttcttttc tttcatcccc
     3301 tcttgcctca ccataaaagc aaacgaaaaa attgctgaac gagttatctg aagtaaatgc
     3361 tcaaaatggt gaataaaatc actttctttg ataaaaagaa tatcttctat tagttgataa
     3421 gattcgtaaa tgtcctcagg tttatcactt ttatgtacaa ctaaaaactt atgctctaaa
     3481 ccattgcgcc attctttata gaaagccaac tccccaccct tatctttatt caggtcggta
     3541 gcaatactgt acagcgccag aagccctggt gattttacct tttcaaataa ttgtcttctg
     3601 ttatcaacat ctaactgcca gaaattctga aaatagatat tcttctgagg tgtacctttt
     3661 tttgttgttg ggtaaagatt ataaagttca catatggcta ccgcaatttt atcaagaata
     3721 ccaaagcaaa gacgaaatgc cgtcctgatt ttttcaattt ctattcctaa aacttcgtca
     3781 ttatacaatt ccagaaaatg gctttcgtac ttaatgtaat ccgtattttg tggatgaaga
     3841 taatcaaaat aaagatggcg tgcgagtgaa aactccgatt taaggcgatt taataccatc
     3901 tccatgggaa tgataaaatc acctgttaca ccgcctcgcg aagcaatcac aagatcatct
     3961 gtagcactcc ctacacatgg gcaatacagg ccatgttctg ataaagtcag atgatttcta
     4021 agacaaaact gtcgatatgg gcttaacact tcgaactctt gttgtgtaag tgcttcatcg
     4081 tgttcgtcag tttcatcatc aacagcatat tctgcgattt tctcgttagt ctgcgctatg
     4141 cgttctaaat agaacgattc ccattgtggt gggatatttt ttgatacaga cgctttaata
     4201 tatcctgctc tcacttcttt tagtaacttg attgaaaatg aagatgaaat aagattgagg
     4261 accataagtg acatcgaacg gttgacccaa gcctgtggta tatctaatcc cttaagattg
     4321 gtaagatcat aatatctcaa tgactcactg agccgaaatt gacttcttaa tgaattagcc
     4381 aaattaacag atagttcagc ctgaaattcc tcctgctcct cagcagatag cttaaaagaa
     4441 cgccagtaga tattttttaa ggaaaccaat tcttctatcg atttgaatgt atggtcattg
     4501 gggttagtaa tgctcaccag attagatagc gcattaccat agttataata gtaaaggcac
     4561 tctcctaaca ctgatataaa tgcttctttg ttatcttcca tcaggttgca accaagctct
     4621 gacgcatttt tattattttg catctgcccg atgtcaacaa gagcacccgc aatgttcgcc
     4681 aatactataa agtagttatc gttcctgatt gttattcttt ccagtttgtt caggaacgca
     4741 actgactgtt gataagattc gtcaaatctt ccaatatcaa ccagttggct aatgaaatta
     4801 ctttcatcga caagttcttt tgttatcaaa ataaattttc cttatacaga ggatttcggt
     4861 gcttcaacag gaggtatgcc ctcacaggag acatctataa ctatcgctga taagcggtct
     4921 cttttatcaa ccggcacagt ttcattaagc atattttcca ttgcactggc gttttcaggt
     4981 tgagatgtat ttttcgccaa atgaggcagg gaattcggtc gagcagaacc aaaccaaaaa
     5041 accagataga taccgtgacc agcagcatcg gggtttttag tataaagctt gtccaattgc
     5101 ccattaagtg cagtccagac atcacgatga taatcacgct ttatctcgat aggtattttt
     5161 atctgcggta gtgaaacaat gatatctgcc cttttatcag aaaccatgtg tccttctggt
     5221 tcacagctta ttttttatgg attaagccgg acacggagta aatccagaaa aatattacgg
     5281 caactctctt caggtttagg cgttagggta cggccatagc tgtcttcatt ccagaattgc
     5341 ttataaatat cggtattttc attggcaatt cggttagaaa tatcccgtat atgatcaagc
     5401 aataatgagt aaagatccat tatgttggca ggcgttttat tcatcaatgt acttacagtc
     5461 tgcttccagt cggcatgatg gaactgtgat tctctataac gaattttctg attgctttgg
     5521 gcatgtgaga gatgatcccg ataactttca cattcaggca gcagtaataa gcgctcaagt
     5581 acttcactag catcg
//
LOCUS       DADMJE010000207         5566 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.210, whole genome shotgun sequence.
ACCESSION   DADMJE010000207 DADMJE010000000
VERSION     DADMJE010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5566
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.210"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(35..772)
                     /gene="bamD"
                     /locus_tag="JN001_003788"
     CDS             complement(35..772)
                     /gene="bamD"
                     /locus_tag="JN001_003788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HAY9054848.1"
                     /translation="MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQ
                     DGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTH
                     PNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
                     TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLM
                     ENSYRQMQMNAQAEKVAKIIAANSSNT"
     gene            907..1887
                     /gene="rluD"
                     /locus_tag="JN001_003789"
     CDS             907..1887
                     /gene="rluD"
                     /locus_tag="JN001_003789"
                     /EC_number="5.4.99.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017383977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA pseudouridine(1911/1915/1917) synthase
                     RluD"
                     /protein_id="HAY9054849.1"
                     /translation="MAQRVQLTATVSENQLGQRLDQALAEMFPDYSRSRIKEWILDQR
                     VLVNGKVCDKPKEKVLGGEQVAINAEIEEEARFEPQDIPLDIVYEDEDIIVINKPRDL
                     VVHPGAGNLDGTVLNALLHYYPPIADVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVE
                     SLQRREITREYEAVAIGHMTAGGTVDEPISRHPTKRTHMAVHPMGKPAVTHYRIMEHF
                     RVHTRLRLRLETGRTHQIRVHMAHITHPLVGDPVYGGRPRPPKGASEAFISTLRKFDR
                     QALHATMLRLYHPISGIEMEWHAPIPEDMVELIEVMRADFEEHKDEVDWL"
     gene            1884..2615
                     /gene="pgeF"
                     /locus_tag="JN001_003790"
     CDS             1884..2615
                     /gene="pgeF"
                     /locus_tag="JN001_003790"
                     /EC_number="1.10.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyphenol oxidase"
                     /protein_id="HAY9054850.1"
                     /translation="MSKLIVPQWPLPKGVAACSSTRIGGVSLPPYDSLNLGAHCGDNP
                     EHVEENRKQLFAAGNLPSKPVWLEQVHGKDVLKLTGEPYASKRADASYSNTPGTVCAV
                     MTADCLPVLFCNRAGTEVAAVHAGWRGLCAGVLEETVSCFADKPENILAWLGPAIGPR
                     AFEVGAEVREAFMAVDAKASAAFIQHGDKYLADIYQLARQRLANVGVEQIFGGDRCTY
                     TENETFFSYRRDKTTGRMASFIWLI"
     gene            2745..5318
                     /gene="clpB"
                     /locus_tag="JN001_003791"
     CDS             2745..5318
                     /gene="clpB"
                     /locus_tag="JN001_003791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002461515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HAY9054851.1"
                     /translation="MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGG
                     SVSPLLTSAGINAGQLRTDINQALNRLPQVEGTGGDVQPSQDLVRVLNLCDKLAQKRG
                     DNFISSELFVLAALESRGTLADILKAAGATTANITQAIEQMRGGESVNDQGAEDQRQA
                     LKKYTIDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEG
                     LAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILF
                     IDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQ
                     KVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAID
                     LIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELSD
                     KERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPE
                     LEKQLEAATQLEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMMESEREKLLRMEQEL
                     HHRVIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALANFMFD
                     SDEAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKA
                     HPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYAHMKEL
                     VLGVVSHNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLKRLYKRLEERGYEIHISDE
                     ALKLLSENGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEVNEDRIVAV
                     Q"
BASE COUNT         1385 a         1327 c         1510 g         1344 t
ORIGIN      
        1 ctcaagggct gccgttttgt gtttcaggtt tctgttatgt attgctgctg tttgcggcga
       61 tgattttcgc tactttttca gcttgcgcat tcatctgcat ctgacggtat gaattttcca
      121 tcagtggcag cgcatcacgc gtagcctggg tatccgggta gtcgcgcaac atgccttcta
      181 cgcggttaac gacggcaacc catgcaccac gttctgtata gtactcggca acggagtatt
      241 catatttcgc cagacgatct ttcaggaata ccagacgttt ggttgcatcg gtagtgtact
      301 gactgttcgg atagccgcgc accagtttgg aaaagtcact aaacgcagct cgtgcatgtt
      361 gaggatcgcg atcgctacgg tcaacgccaa agaacccttg cagcgcactg tcatccagcg
      421 ccatattggt caggccacgc atgtacatga cataatcgat attcggatgg gtcgggttaa
      481 ggcgaataaa acgatcgatg gcagcctgtg ctaacggcaa atcggcgttt ttatagtagg
      541 cgtagatgag atccagctgc acctgctgcg aatacggacc aaacggatag cgattatcta
      601 atgcttccag ttgcgttatt gcctgtctcc agttaccgtc ctgcagcttt tgttgtgcag
      661 tcgcgtaaat ttcatttggt ggattatcag gtacttcttc ctttgacccc gagcaacccg
      721 ccaaaaacag gcttagtgtg gcggctgcca ccagatattt catgcgcgtc atgacgtttt
      781 gactttcctc aaaatgtaat acgggagatt ctctgttcct gctcccggtt aagaccagct
      841 acaatagcac actatattaa acggcaaagc cgtaaaaccc caacgataaa cgaagaagca
      901 gtatatatgg cacaacgagt acagctcact gcaacggtgt ccgaaaacca actcggtcaa
      961 cgcttagatc aggctttggc cgaaatgttc ccggattatt cacgttcgcg aataaaagaa
     1021 tggatcctcg accagcgcgt gctggtaaac ggcaaagttt gtgataagcc gaaagaaaaa
     1081 gtattgggtg gcgagcaggt tgccatcaac gctgagattg aagaagaagc gcgttttgaa
     1141 ccgcaggata tcccgctgga tatcgtctat gaagatgaag atatcatcgt cattaataaa
     1201 ccgcgcgacc tggtggtaca tcctggcgcg ggtaacctgg atggcacggt actgaatgcg
     1261 ttgcttcatt attatccgcc cattgccgat gtaccgcgtg cgggcatcgt ccatcgtctg
     1321 gataaagaca ccactggcct gatggttgtg gcaaaaaccg ttccggctca gacgcgttta
     1381 gtcgaatctt tgcaaaggcg tgaaattact cgtgagtatg aagcggtggc aattggtcat
     1441 atgaccgctg gcggtacagt agatgaacca atcagccgcc acccgaccaa acgtactcac
     1501 atggcggtgc atcccatggg caaaccggcg gtcactcact atcgcatcat ggaacacttc
     1561 cgtgtgcaca cgcgtctgcg gttgcgtctg gaaaccggac gtacgcacca gatccgcgtg
     1621 catatggcgc atattaccca tccgctggtg ggcgatccgg tttatggtgg ccgtccgcgt
     1681 ccgccaaaag gtgcttcgga agcgtttatc tccacgctgc gtaagtttga ccgccaggcg
     1741 cttcatgcaa ctatgctgcg tctttatcac ccgatctccg gcatcgaaat ggaatggcat
     1801 gcgcctattc cagaagatat ggtggagttg attgaggtta tgcgcgccga tttcgaagag
     1861 cataaggatg aagtggactg gttatgagta agctgattgt cccgcagtgg ccgctgccaa
     1921 aaggtgttgc ggcctgtagc tctacccgta tcggcggcgt gagcttgcca ccttacgact
     1981 ctctcaacct tggcgctcat tgtggtgata acccggagca cgtagaggag aatcgcaagc
     2041 aactttttgc tgcgggaaat ttgccttcaa aaccggtctg gcttgagcag gtacacggca
     2101 aagatgtgct taagctcact ggcgaacctt atgcctcaaa acgggcggat gcctcttata
     2161 gcaatacgcc cggcacggtt tgcgcagtga tgactgccga ctgcctccct gtgctgtttt
     2221 gcaatcgagc gggaacggaa gtcgccgccg ttcatgctgg ctggcgtgga ctgtgcgcag
     2281 gcgtgctgga agagacggtt tcctgttttg ctgataaacc tgaaaacatt ctcgcctggt
     2341 tagggccggc aattggtcca cgcgcgttcg aagtgggggc ggaggttcgc gaggcgttta
     2401 tggcagtaga cgctaaagca agtgcagctt tcattcagca tggtgataag tatctggcgg
     2461 atatttatca gcttgcccgg cagcgtctgg cgaacgtggg tgttgagcaa attttcggcg
     2521 gcgaccgttg tacatatacg gaaaatgaga ctttcttctc ttatcgtcgc gacaagacca
     2581 ccggtcgtat ggcaagtttc atttggctga tataacctaa agaatcaaga cgattcggta
     2641 cgcgtgattt tcttttcaca ttaatctggt caataacctt gaataattga gggatgacct
     2701 catttaatct ccagtagcaa ctttgatccg ttatgggagg agttatgcgt ctggatcgtc
     2761 ttactaataa attccagctt gctcttgccg atgcccaatc acttgcactc gggcacgaca
     2821 accaattcat cgaaccactt catttaatga gcgccctgct gaatcaggaa gggggttcgg
     2881 ttagtccttt attaacatcc gctggcataa atgctggcca gttgcgcaca gatatcaatc
     2941 aggcattaaa tcgtttaccg caggttgaag gtactggtgg tgatgtccag ccatcacagg
     3001 atctggtgcg cgttcttaat ctttgcgaca agctggcgca aaaacgaggt gataacttta
     3061 tctcgtcaga actgttcgtt ctggcggcac ttgagtctcg cggcacgctg gccgacatcc
     3121 tgaaagcagc aggggcgacc accgccaaca ttactcaagc gattgaacaa atgcgtggag
     3181 gtgaaagcgt gaacgatcaa ggtgctgaag accaacgtca ggctttgaaa aaatatacca
     3241 tcgaccttac cgaacgagcc gaacagggca aactcgatcc ggtgattggt cgtgatgaag
     3301 aaattcgccg taccattcag gtgctgcaac gtcgtactaa aaataacccg gtactgattg
     3361 gtgaacccgg cgtcggtaaa actgccatcg ttgaaggtct ggcgcagcgt attatcaacg
     3421 gcgaagtgcc ggaaggattg aaaggccgcc gcgtactggc gctggatatg ggcgcgctgg
     3481 tggctggggc gaaatatcgc ggtgagtttg aagaacgttt aaaaggcgtg cttaacgatc
     3541 ttgccaaaca ggaaggcaac gtcatcctgt ttatcgacga attacatacc atggtcggcg
     3601 cgggtaaagc cgatggcgca atggacgccg gaaacatgct gaaaccggcg ctggcgcgtg
     3661 gtgaattgca ctgcgtaggt gccacgacgc ttgacgaata tcgccagtac atcgaaaaag
     3721 atgctgcgct ggaacgtcgt ttccagaaag tgtttgttgc cgagccttct gttgaagata
     3781 ccattgcgat tctgcgtggc ctgaaagaac gttacgaatt gcaccaccat gtgcaaatta
     3841 ctgacccggc aattgttgca gcagcgacgt tgtctcatcg ctacattgct gaccgtcagc
     3901 tgccggataa agccatcgac ctgatcgatg aagcagcatc cagcattcgt atgcagattg
     3961 actcaaaacc agaagaactc gaccgactcg atcgtcgtat catccagctc aaactggaac
     4021 aacaggcgtt aatgaaagag tctgatgaag ccagtaaaaa acgcctggat atgctcaacg
     4081 aagaactgag cgacaaagaa cgtcagtact ccgagttaga agaagagtgg aaagcagaaa
     4141 aggcatcgct ttctggtacg cagaccatta aagcggaact ggaacaggcg aaaatcgcta
     4201 ttgaacaggc tcgccgtgtg ggggacctgg cgcggatgtc tgaactgcaa tacggcaaaa
     4261 tcccggaact ggaaaagcaa ctggaagccg caacgcagct cgaaggcaaa actatgcgtc
     4321 tgttgcgtaa taaagtgacc gacgccgaaa ttgctgaagt gctggcgcgt tggacgggga
     4381 ttccggtttc tcgcatgatg gaaagcgagc gcgaaaaact gctgcgtatg gagcaagaac
     4441 tgcaccatcg cgtcattggt cagaacgaag cggttgatgc ggtatctaac gctattcgcc
     4501 gtagccgtgc ggggttggcg gatccaaatc gcccgattgg ttcattcctg ttcctcggcc
     4561 caacgggtgt ggggaaaact gagctttgta aggcgctggc gaactttatg tttgatagcg
     4621 acgaggcgat ggtccgtatc gatatgtccg agtttatgga gaaacactcg gtgtctcgtc
     4681 tggttggtgc gcctccggga tatgtcggtt atgaagaagg tggctacctg accgaagctg
     4741 tgcgtcgtcg tccgtattcc gtcatcctgc tggatgaagt ggaaaaagcg catccggatg
     4801 tcttcaacat tctgttgcag gtactggatg atggtcgtct gactgacggg caggggagaa
     4861 cggtcgactt ccgtaatacg gttgtcatta tgacctctaa cctcggttcc gatttgattc
     4921 aggaacgctt cggtgaactg gattatgcgc acatgaaaga gctggtgctc ggtgtggtaa
     4981 gccataactt ccgtccggaa ttcattaacc gtattgatga agtggtggtc ttccatccgc
     5041 tgggtgaaca gcacattgcc tcgattgcgc agattcagtt gaaacgtctg tacaaacgtc
     5101 tggaagaacg tggttatgaa atccacattt ctgacgaggc gctgaaactg ctgagcgaga
     5161 acggttacga tccagtctat ggtgcacgtc ctttgaaacg tgctatccag cagcagatcg
     5221 aaaacccgct ggcacagcaa atactgtctg gtgaattggt tccgggtaaa gtgattcgcc
     5281 tggaagttaa tgaagaccgg attgtcgctg tccagtaatg ataaaacgag cccttcgggg
     5341 ctcgtttttg tctataagtt agacggaaaa gactatattt aagatgtttt gcctgaaaaa
     5401 tgagcgaacg ataaagtttt tatatttttc gcttgtcagg ccggaataac tccctataat
     5461 gcgccaccac tgacacggaa caacggcaaa cacgccgccg ggtcagcggg gttctcctga
     5521 gaatctcaac agagaaaagc aaaaaaatgc ttgactctgt agcggg
//
LOCUS       DADMJE010000208         5530 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.211, whole genome shotgun sequence.
ACCESSION   DADMJE010000208 DADMJE010000000
VERSION     DADMJE010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5530)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5530)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5530
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.211"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(336..599)
                     /locus_tag="JN001_003792"
     CDS             complement(336..599)
                     /locus_tag="JN001_003792"
                     /inference="COORDINATES: protein motif:HMM:NF033564.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ISAs1 family transposase"
                     /protein_id="HAY9054852.1"
                     /translation="MDTHYYVSSLEIAPEQAAKAVRQHWHIENQQHWVLDVAYREDAS
                     RLGDREAAGFFALFRRILRPSNRMSHLGKLWFRTHYSPNKKRL"
     gene            865..1158
                     /locus_tag="JN001_003793"
     CDS             865..1158
                     /locus_tag="JN001_003793"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054853.1"
                     /translation="MIGILKESPKDPDSLKVISITTPARGFSKYGFGSTEHGWFTTIT
                     YNAKNSYGGYVGAKSITFVYLNGDYKVAVPMSNGERVMLDKVSFSCKDNCQTK"
     gene            complement(1186..1341)
                     /locus_tag="JN001_003794"
     CDS             complement(1186..1341)
                     /locus_tag="JN001_003794"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054854.1"
                     /translation="MNSKQKCSHSNLEKEYYLGSATGDYKCLDCGEVVFGKDWPEKER
                     SKNDNEE"
     gene            complement(1580..1741)
                     /locus_tag="JN001_003795"
     CDS             complement(1580..1741)
                     /locus_tag="JN001_003795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001333247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation protein"
                     /protein_id="HAY9054855.1"
                     /translation="MHEPPVQSDCCALSGNYRLESNPERHDKTPLAAATGNRFVREMC
                     SEFLKWRPD"
     gene            complement(1766..2026)
                     /locus_tag="JN001_003796"
     CDS             complement(1766..2026)
                     /locus_tag="JN001_003796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001326445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054856.1"
                     /translation="MALKSGKAGKRMRRCRFSIGSAPLTSITKSDAQISGGETRQDYK
                     DPRRFPLVAPSCALLFLPFGLPVSFRCYGRVCLIPRLTLSSG"
     gene            3534..3758
                     /locus_tag="JN001_003797"
     CDS             3534..3758
                     /locus_tag="JN001_003797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000879771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TraY domain-containing protein"
                     /protein_id="HAY9054857.1"
                     /translation="MLAIRLSDEIESRLDSLAKQTGRTKTFYAREAILAHLEDLEDYY
                     LSAETAARVRRGDEAVHSSEDVRKSLGLDD"
     gene            3742..4008
                     /locus_tag="JN001_003798"
     CDS             3742..4008
                     /locus_tag="JN001_003798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000262326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY9054858.1"
                     /translation="MVWTINYSDRALKSLRKMDKQNARRIVDFMDLRIAVAADPRQSG
                     KPLKGELGEFWRYRVGDYRILCEIRDDELVILAATIGHRREVYD"
     gene            complement(4055..4324)
                     /locus_tag="JN001_003799"
     CDS             complement(4055..4324)
                     /locus_tag="JN001_003799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017411319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054859.1"
                     /translation="METITHPTLVQLVAAGAVRVVIAVGQPGGWTLLVRYGLAERALA
                     AQRSKQLRVFRKLDTLVLYLQQIGVCRFEVDATGFMGAPRQIRSS"
     gene            complement(4512..4610)
                     /locus_tag="JN001_003800"
     CDS             complement(4512..4610)
                     /locus_tag="JN001_003800"
                     /inference="COORDINATES: protein motif:HMM:NF015750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054860.1"
                     /translation="MATIIVHCPRCQSDCVCRHGKGAVSVPCWRVF"
     gene            complement(4652..>5530)
                     /locus_tag="JN001_003801"
     CDS             complement(4652..>5530)
                     /locus_tag="JN001_003801"
                     /inference="COORDINATES: protein motif:HMM:NF013884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HAY9054861.1"
                     /translation="IISGFIMCYTTHNKNLTIISFLTLRVQRIIPLYWVFTTLALTVF
                     VISPSLVNSSGGETSIIDSYFLIPSSAKYLVNNGWTLSYEFYYYLIFSLFLVAFSSTK
                     LRYACIIATLLILSSFGLIFQPEDIVVDFLLSSWLYEFAIGVILFVAYDRGLVKANFG
                     YISVTLALAFLLYKNFNMEYLSGAPRVISIGVPMGLLFYGFLSFEGYFKRKKHFISNL
                     FERIGDSSYSLYLSHPFVLSPMAIIASKLGVTNSFLFGVILIGSSVFIGYATYVIIEK
                     RIIYFTKIKLVMPSVG"
BASE COUNT         1546 a         1259 c         1216 g         1509 t
ORIGIN      
        1 aaaaaaaaga tcgacccccg acccgcctat atgaaaccaa cttaaagttt ctgtattgta
       61 aatatttcct ttatgagcag tatgagccat aacgacaaga agagcagcaa taccccgcaa
      121 aaactgtata gaatataaca tcgaccacct aattccttac attatagttc atataaccta
      181 accatcttaa gcaagtgtta gaaatgggta cttaatggac accaaaaaaa tttaagcttt
      241 ccaataagtt agctagctaa aggccatgat tggcccaata atagtattct accaataaac
      301 caccagttaa tacaccgcca acggcacccg ctgttttata aacgcttctt gtttggcgag
      361 taatgagttc tgaaccagag cttacccaga tgcgacatcc tatttgaggg gcgcaggata
      421 cggcgaaaca gggcaaaaaa ccctgcagct tctctatctc cgagccgact ggcatcttcc
      481 cgatacgcca catccagcac ccaatgttgc tgattttcaa tgtgccaatg ctggcgaacc
      541 gctttggctg cctgttccgg cgctatctcc agcgagctga cgtaataatg ggtatccaag
      601 cttagagcct atcccaatag gctcttaaag tcggcaacgt ctatttattt tcacagcgca
      661 taacggatgt tatggtaaat ctatctataa atatctatta tagtggattt cctatagttg
      721 ttttggaaaa tgacaaggat atatatgaaa ataattaagt gggcttcact gtctggtgtt
      781 ctgttaatat ctgcttgtgg tgtttcttag aacgaagtaa atagtgctaa ttatggttta
      841 aaaccaatag ataatgatgc gaaagtgatt ggtatactta aagagagtcc aaaagatcct
      901 gattctctaa aagttatatc aataaccacc cccgccagag gtttttctaa gtatggcttt
      961 ggctctacag agcatggctg gttcactact atcacatata atgcaaaaaa ctcttatggc
     1021 ggttatgttg gtgctaagtc cattactttc gtttacttaa acggagatta taaagtggca
     1081 gtgccaatgt ctaatggtga gagggttatg ttagataaag tgtcattttc atgtaaagac
     1141 aattgccaaa ctaaatgata aaaaaggtcg caatagcggc tttttttatt cttcgttatc
     1201 atttttactt ctttcttttt ctggccagtc cttcccaaaa acaacctccc cgcaatccaa
     1261 acatttataa tctcctgtgg cgctacccaa gtagtattct ttttctagat ttgaatgaga
     1321 acatttttgt ttgctgttca ctacagtcac ctttggatat tcatttattc gtgaatgatt
     1381 tttatctata ccgacattgt taaatgatgg aaagatcttc ttgagatcct ttttttctac
     1441 gcgtaatctt catgactgta aacgaaaaaa ccaccctggc aggtggtttt tcgaaggtta
     1501 gttaatcctg gcagattctc taaccgtggt aacagtcttg tgcgagacat gtcaccaaat
     1561 ctgtccttcc agtgtagcct cagtcaggcc gccacttcaa gaactctgaa cacatctctc
     1621 gcacaaacct gttaccagtg gctgctgcca gtggcgtttt gtcgtgtctt tccgggttgg
     1681 actcaagacg atagttaccg gataaggcgc agcagtcgga ctgaacgggg ggttcgtgca
     1741 tacagtccag cttggagcga actgcctacc cggaactgag tgtcaggcgt ggaatgagac
     1801 aaacgcggcc ataacagcgg aatgacaccg gtaaaccgaa aggcaggaac aggagagcgc
     1861 acgagggagc taccaggggg aaacgcctgg gatctttata gtcctgtcgg gtttcgccgc
     1921 cactgatttg agcgtcagat tttgtgatgc ttgtcagggg ggcggagcct atggaaaaac
     1981 ggcagcgccg catccttttt ccggccttcc ctgacttgag tgccatctct ttatcttgtc
     2041 attcgtgagc aggtaacgcc cgccgcagcc tcacggcagg agcgtagcga ccgagtgagc
     2101 gaggaggcgt catatcaccg taactcccat tttctccctt acgccctgta gctgcatttt
     2161 cccctgtcac atgaagcact ttcattaggt gctactccgc cgtaacatat tcagccactg
     2221 tacactccgc tagcgctacg tgactggttc agtgctgcgc tccgaaaccc gctaacaacc
     2281 tctccgctac tagatatcac cccatgccat ctgaatatga tgaacaactg gattcgactg
     2341 atacgcagct tcccggcgaa tatgaccttt ttgatttaat ggcgcaggtt actgaagaga
     2401 acctgcacgc cccggtggat tttgggccgc ctgtcggccg ggaagcgtta tagctttttc
     2461 gcttacccgc gtacgtgtaa tacgccggta ttacatctta tttctttatt ttcatgtgat
     2521 tacaggtggt tgtaatacgt tgcgtattac ataaataaac gggaacttca gtttttacct
     2581 tttaattcat gcaattgcga tgaaaatcgc ggttgcgtat ggtgtatggc catttaaggg
     2641 ataaagaatc atctccttac cgggctgagc tttgcctatt ctgaggagat ctgtgaaaaa
     2701 aagcgtccat aactagctcg ttcatacttg tatgaacagc ttattcctcc tgactactaa
     2761 taaactacag cgtcactact gatttactac aaatcggagg aggatgacta cttatctact
     2821 actgatttac tactgaatta ctactgaatt actactgaat tacgtcataa cagttctctg
     2881 aaccattcgt acatccgacc cccttctctt catgcttgat gctcttgcca acgcttcacg
     2941 gtcacgcaat aaattgcgtc cccgttcacc gttttcggat gagaagaacg tcgaaaacag
     3001 gacttccact ggctgcacgg cgtgaaattc tgcgctatgc acttgcgcgc atactcatgc
     3061 atgccgtaaa aacagagcct gcgtgtttct ggcgggtttt cgggtggttt gttgccttgt
     3121 tttaccggtt tcccgtcaga aacgctctca gagcctctca ggcggtgcac gcaacagatg
     3181 ttatgttcaa tcagactgat ctgcgggtac aaaaaaagcc ccgggggctt ttaactactg
     3241 acttattttt ttgaggattt gctgggtttc aatttgtcag tattccccgg cgttttttta
     3301 ttgtcacgct ggcgtttatc aggttcccct gttgaatcgg caattcgttt cggacccggc
     3361 ttaagaccta taatcgttat cctttcaata gttaagagga aagccctcaa gctggatata
     3421 ttgacagcgt tacggattat caagaggggc cagcaagatt attttttgtt cttttaggtt
     3481 gattgcgata ctattgctat acatgtatat caaatggtgt tcaggaggtt tatatgcttg
     3541 ctatccggtt atctgatgag attgagtccc gtctggactc gctggcgaag caaaccggca
     3601 gaacaaagac gttctatgcg cgggaagcaa tactggcgca tctggaagac ctggaagatt
     3661 attatctttc agcagaaact gccgcacgcg ttcgccgtgg tgatgaagcc gtgcattcgt
     3721 ctgaagacgt gaggaagtca cttggtctgg acgattaact attccgaccg ggcgctcaaa
     3781 tcgttacgca agatggacaa acagaacgca cgacggattg tggattttat ggatttacgc
     3841 attgcagttg ctgccgatcc tcgccagtca gggaagccgc tcaaaggtga gctgggcgag
     3901 ttctggcgct atcgggtggg agattatcgc attctgtgtg agatccggga tgacgagctg
     3961 gttatccttg ccgccaccat tggccatcgc cgcgaagttt acgactgaag cccgctatgc
     4021 gggctttttt tgatgctgat aacgcctttt atgttcaaga gctcctgatc tgtctcgggg
     4081 cacccatgaa gcccgtggca tccacctcga accggcaaac cccgatctgc tgcaggtaga
     4141 gaaccagggt atcgagcttg cgaaaaactc tgagctgctt gctgcgctgg gcggccaggg
     4201 cacgttcggc tagaccgtag cgcaccagca gcgtccagcc gccaggttgg ccaactgcga
     4261 tcacgacacg aacagcaccg gccgccacca gttgtaccag ggtgggatgg gtaatggttt
     4321 ccatggggga gattccgaga caagggatag tgcggcgcag gatgggagat aacgcctagc
     4381 aaaacaagtc atcttgcagg atgaccagca gcaaaaaggg cgtccgattt aacgtaacgc
     4441 ccccttatgc gcagtcatcc aggcgggtta tgactggggt gggtactgag caacgtagct
     4501 ggttgtcagc ttcaaaagac tcgccaacac ggcacggaaa cagcaccctt tccgtggcgg
     4561 cagacgcagt ctgattggca acgtgggcaa tgaacgatga tagtggccat aaggaatact
     4621 gagtcttaaa agccaccatg gctcacgttc atcaacctac tgaaggcatc accaatttaa
     4681 ttttggtgaa ataaattatt cttttctcga taattacgta agttgcataa ccaataaata
     4741 cggacgaccc aattaatata accccaaaaa gaaatgaatt tgtcacccct aacttactag
     4801 caataattgc catcggactt aaaacgaaag gatgggaaag gtataaggag taagagctat
     4861 ctccaatccg ttcaaataaa tttgagataa aatgtttttt tcgtttaaaa tacccctcaa
     4921 atgataagaa accataaaac agcaacccca ttggaacacc aatagatatc actcttggag
     4981 cacctgataa atactccatg ttaaagtttt tatatagcaa aaaagccaat gccaatgtaa
     5041 ctgagatata accaaaatta gctttcacca accccctgtc ataagcaaca aataatataa
     5101 caccaatcgc aaactcatac agccaactgc ttaacaaaaa atccaccact atatcttctg
     5161 gctgaaaaat caatccaaaa gaggataaaa ttaagagagt agcaatgata catgcatatc
     5221 ttagtttggt tgacgagaaa gcaaccaaaa ataacgaaaa gattagatag taataaaatt
     5281 catagcttaa tgtccatccg ttatttacca agtatttggc actagatggt attaaaaaat
     5341 acgaatctat gatgctagtt tctccaccag atgagttaac aaggctggga gatataacga
     5401 acacagtcag agctagagtc gtaaataccc agtaaagagg aatgattctc tgaacacgca
     5461 acgtcaaaaa acttatgatt gttaaatttt tattatgtgt tgtgtagcac attataaaac
     5521 ctgaaataat
//
LOCUS       DADMJE010000209         5439 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.212, whole genome shotgun sequence.
ACCESSION   DADMJE010000209 DADMJE010000000
VERSION     DADMJE010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5439)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5439)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5439
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.212"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..914
                     /locus_tag="JN001_003802"
     CDS             <1..914
                     /locus_tag="JN001_003802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418120.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HAY9054862.1"
                     /translation="PLSLRIGITSGIGLFIALMGLKNTGVIVANKDTLVMIGDLSSHG
                     VLLGILGFFIITVLSSRHFHAAVLVSIVVTSCCGLFFGDVHFSGVYSIPPDISGVIGE
                     VDLSGALTLELAGIIFSFMLINLFDSSGTLIGVTDKAGLIDGNGKFPNMNKALYVDSV
                     SSVAGAFIGTSSVTAYIESTSGVAVGGRTGLTAVVVGVMFLLVMFFSPLVAMVPPYAT
                     AGALIFVGVLMTSSLARVNWDDFTESVPAFITTVMMPFTFSITEGIALGFMSYCIMKV
                     CTGRWRDLNLCVVVVAALFALKIILVD"
     gene            967..1419
                     /locus_tag="JN001_003803"
     CDS             967..1419
                     /locus_tag="JN001_003803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418119.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1198 domain-containing protein"
                     /protein_id="HAY9054863.1"
                     /translation="MIWIMLATLAVVFVVGFRVLTSGARKAIRRLSDRLNIDVVPVES
                     MVDQMGKSAGDEFLRYLHRPDESHLQNAAQVLLIWQIVIVDGSEQNLLQWHRILQKAR
                     LAAPITDAQVRLALGFLRETEPEMQDINAFQMRYNAFFQPAEGVHWLH"
     gene            1630..2820
                     /gene="nepI"
                     /locus_tag="JN001_003804"
     CDS             1630..2820
                     /gene="nepI"
                     /locus_tag="JN001_003804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418118.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine ribonucleoside efflux pump NepI"
                     /protein_id="HAY9054864.1"
                     /translation="MSEFIAENRGADAITRPNWSAVFSVAFCVACLIIVEFLPVSLLT
                     PMAQDLGISEGGAGQSVTVTAFVAMFASLFITQTIQATDRCYVVILFAVLLTLSCLLV
                     SFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIA
                     APLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV
                     MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFIGTSLSSFIL
                     KRSVKLALAGAPLILAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTWITRSL
                     ADQAEKAGSIQVAVIQLANTCGAAIGGYALDNIGLTSPLMLSGTLMLLTALLVTAKVK
                     MKKS"
     gene            complement(2861..3154)
                     /locus_tag="JN001_003805"
     CDS             complement(2861..3154)
                     /locus_tag="JN001_003805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054865.1"
                     /translation="MKPTTLLLIFTFFAMPGIVYAESPFSSLQSAKEKTTVLQDLRKI
                     CTPQASLSDEAWEKLMLSDENNKQHIREAIVAMERNNQSNYWEALGKVECPDM"
     gene            3376..4194
                     /gene="nlpA"
                     /locus_tag="JN001_003806"
     CDS             3376..4194
                     /gene="nlpA"
                     /locus_tag="JN001_003806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein NlpA"
                     /protein_id="HAY9054866.1"
                     /translation="MKLTTHHLRTGAALLLAGILLAGCDQSSSDAKHIKVGVINGAEQ
                     DVAEVAKKVAKEKYGLDVELVGFSGSLLPNDATNHGELDANVFQHRPFLEQDNQAHGY
                     KLVAVGNTFVFPMAGYSKKITTVAQIKEGATVAIPNDPTNLGRALLLLQKEKLITLKE
                     GKGLLHTALDITDNPRHLQIMELEGAQLPRVLDDPKVDVAIISTTYIQQTGLSPVHDS
                     VFIEDKNSPYVNILVAREDNKNAENVKEFLQSYQSPEVAKAAETIFNGGAVPGW"
     gene            complement(4221..5120)
                     /locus_tag="JN001_003807"
     CDS             complement(4221..5120)
                     /locus_tag="JN001_003807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005030206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY9054867.1"
                     /translation="MGSTRKGMLNVLIAAVLWGSSGVCAQYIMEQSQMSSQFLTMTRL
                     IFAGLILLTLSFVHGDKIFSIINNHKDAISLLIFSVVGALTVQLTFLLTIEKSNAATA
                     TVLQFLSPTIIVAWFSLVRKSRPGILVFCAILTSLVGTFLLVTHGNPTSLSLSPAALF
                     WGIASAFAAAFYTTYPSTLIARYGTLPVVGWSMLIGGLILLPFYARQGTNFVVNGSLI
                     LAFFYLVVIGTSLTFSLYLKGAQLIGGPKASILSCAEPLSSALLSLLLLGITFTLPDW
                     LGTLLILSSVILISMDSRRRPEK"
     gene            complement(5231..5434)
                     /locus_tag="JN001_003808"
     CDS             complement(5231..5434)
                     /locus_tag="JN001_003808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000965477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar transporter"
                     /protein_id="HAY9054868.1"
                     /translation="MLYFQDLMPEKIGSATTLYANTSRVGWIIAGSVDGIMVEIWSYH
                     ALFWLAIGMLGIAMICLLFIKDI"
BASE COUNT         1298 a         1238 c         1395 g         1508 t
ORIGIN      
        1 ttcccttaag tttacgtatt ggtatcacca gcggaattgg attatttatc gccttaatgg
       61 gattaaaaaa tactggcgtt attgtcgcca ataaagacac gctggtgatg attggcgatt
      121 taagttctca cggcgtgttg ttaggtattt tagggttttt tattataacc gtgttgtcat
      181 cacgtcattt tcatgccgcg gtgctggttt ctatagtggt gacgtcttgc tgtggattat
      241 ttttcggtga tgttcatttt agcggcgtct attccattcc gcctgatatt agcggcgtca
      301 ttggtgaagt agatttgagc ggcgcgttaa cacttgaact cgccggtatc attttctcct
      361 ttatgctgat caacctattt gattcatcag gaacattaat tggtgtaact gataaagcgg
      421 gcttaataga tggtaacggt aaattcccca atatgaataa ggcgctgtat gttgatagcg
      481 tcagttcggt ggcgggtgcg tttatcggca cctcgtctgt tactgcctat attgaaagta
      541 cttctggtgt ggcagtcggt ggccgcacgg ggctgactgc ggttgtggtt ggcgttatgt
      601 tcctgttggt tatgttcttc tcaccgctgg tggcgatggt tcctccttac gcaaccgccg
      661 gagcgttaat ctttgttggc gtgctgatga cttcgagcct ggcgcgcgtt aactgggatg
      721 attttaccga atcggtgcct gcgtttatta ccacggtgat gatgcccttt actttctcga
      781 tcaccgaagg gattgcactc ggctttatgt cgtactgcat catgaaagtg tgcaccgggc
      841 gctggcgcga tctgaacctg tgtgtggtgg tggtcgcagc tctgtttgca ctgaagatta
      901 ttctggtgga ttagtaactg gcgagggttt ccagatatca tgagttctga ttacgcagga
      961 gaactcatga tctggataat gctcgccacg ctggcggtag tgtttgtggt tggttttcgg
     1021 gtgctgacat ccggggccag aaaagcgatt cgccgtctca gtgatcggct gaatatcgat
     1081 gtcgtacccg tggagtcgat ggtcgatcaa atgggaaagt cagccggtga cgaattttta
     1141 cgttatttgc atcgcccgga tgagtcgcac ctgcaaaacg ccgcgcaggt gttgctcatc
     1201 tggcaaattg tcattgtcga tggtagcgaa cagaacctgc tgcaatggca tcggatttta
     1261 caaaaagccc gtcttgccgc gccgattacc gatgctcaag tcaggctggc gctgggtttt
     1321 ctgcgcgaaa ccgaacctga aatgcaggat attaatgctt ttcagatgcg ctataacgcg
     1381 ttctttcagc ctgccgaggg cgttcactgg ctgcattaaa accgcttcgt cttatcagcc
     1441 tacagaccgc gcctgacctg tcgggtggat aagacgttca cgccgcatcc ggtaatcttt
     1501 gccctgttcc gtttcgatct taactccagc tcaagcaaca ccgtaaaagt tgcaaaaacg
     1561 ttaaatgcgt cacacatttc aatgttaaag tggtcggctt ttcccctgaa acatgccacg
     1621 ggtaacacca tgagtgaatt tattgccgaa aaccgcggcg cggatgccat cacccgaccg
     1681 aactggtcag ccgttttctc ggtggcgttt tgtgtcgcct gtctgattat cgttgagttt
     1741 ttgcccgtca gtttgttgac gccaatggcc caggatttag gcatttcgga agggggtgcc
     1801 gggcaatcgg tgaccgtgac cgcctttgtg gcaatgtttg ccagtttgtt tattacccag
     1861 acaattcagg ctactgaccg ctgctacgtt gttattttgt ttgccgtttt gctgacgctc
     1921 tcctgcttgc tggtttcctt tgctaactca ttcagtttgc ttttaatcgg tcgtgcctgt
     1981 ctggggctgg cgctgggcgg gttctgggcg atgtcggcgt cgctgaccat gcgtctggtg
     2041 ccgccgcgta cggtgccgaa ggcgctgtcg gtgatcttcg gcgcggtttc tattgcgctg
     2101 gtgattgccg cgccgttggg cagtttttta ggcgagctta tcggttggcg caatgtcttt
     2161 aatgcggcgg cggtgatggg cgtgctgtgt attttctgga ttatcaaatc attgccttca
     2221 ctgccaggcg aaccctcgca tcagaaacaa aatactttcc gcttattaca acgtccgggt
     2281 gtgatggcag ggatgatcgc catcttcatg tctttcgccg ggcagtttgc tttcttcacg
     2341 tatattcgcc cggtgtatat gaacctggcg ggattcggcg tggatggctt aacgctggtg
     2401 ctgttgagtt ttggtatcgc cagctttatt ggtacgtcgc tttcgtcgtt cattcttaaa
     2461 cgttcggtaa aactggcctt agcaggcgcg ccgttaatac tggctgtgag tgcgttggta
     2521 ctgacgttgt ggggaagcga taaaatcgtt gctaccggcg tggcgattat ctgggggcta
     2581 acttttgcat tggttcccgt cggctggtca acgtggatca cccgctcgct ggccgatcag
     2641 gcagaaaaag ccgggtctat tcaggtggcg gttattcagc ttgctaatac ctgtggcgcg
     2701 gcaatcggcg gttatgcgct ggataatatt ggtctgactt cgccgttgat gttgtccggc
     2761 acattgatgt tgctgactgc attgttggtt actgcaaagg tgaaaatgaa gaaatcctga
     2821 tatcaggtaa agaagcgttg gtcagtagtt gttgctgttc ttacatatcc gggcattcta
     2881 ccttacccaa cgcttcccaa taattgctct gattattacg ttccatcgcc acgatggcct
     2941 cgcgtatatg ttgtttattg ttttcatctg acaacattaa cttttcccac gcttcatctg
     3001 ataatgacgc ctgtggcgtg caaattttac gtaaatcttg taataccgtg gttttctctt
     3061 ttgcggactg cagtgagcta aaaggcgact cggcgtatac gatgcctggc atagcgaaaa
     3121 aagtgaaaat aagcagtagt gtcgttggtt tcatggattc aaccttttac aaatgtgtat
     3181 cgaatgaagc ataagtgtag tttgctttca tcgctctcat cattctgtac gaaacgcgct
     3241 tgcgtggtca gtaagaagtg ccagacttta tattccactt ttattccttt ttattcttat
     3301 cgatagcgtt tcgtttttta aaccgcagcg accttaccgc tatagtcagg taatcattaa
     3361 taaaaggata aaaaaatgaa actgacaaca catcatctac ggacaggggc cgcattattg
     3421 ctggccggaa ttctgctggc aggttgcgac cagagtagca gcgatgcaaa acacattaaa
     3481 gttggcgtta taaatggcgc agaacaagat gtcgcggaag tcgctaaaaa ggtggcaaaa
     3541 gagaaatatg gcctcgatgt tgaactggta ggatttagcg gttcgttgct accgaacgat
     3601 gcgacaaatc atggcgaact tgatgcgaat gtcttccagc atcgaccctt tcttgaacaa
     3661 gataatcagg cgcatggtta taaactggta gcggtgggaa atacgtttgt cttccctatg
     3721 gcgggttatt ccaaaaaaat cacaaccgtg gcgcaaataa aagaaggcgc gacagtggcg
     3781 atccccaacg acccgaccaa ccttggtcgc gcacttttac tgttgcaaaa agagaagcta
     3841 attactctga aagagggaaa agggttatta cataccgcgc tggatataac cgataatcct
     3901 cgtcatttgc agattatgga actcgagggg gcgcagcttc cgcgcgtact ggatgatccc
     3961 aaagttgatg tagcgattat cagcaccact tacattcagc agacagggct ttctccggtg
     4021 cacgacagcg tatttattga agataagaat tcgccgtatg tgaatatttt ggtggcacgg
     4081 gaagataata agaatgcaga aaacgtgaag gaatttctgc aatcttatca atcacccgaa
     4141 gtcgctaaag cggcagaaac catttttaac ggtggcgcgg tgcctggctg gtaattctca
     4201 ctcatgccgc gccggacgat ttatttttct ggccggcgac gggaatccat tgaaatcaaa
     4261 atcaccgatg acagaatcag cagcgttccc agccagtccg gtaatgtgaa cgtgatcccc
     4321 agcaacagca aagagagtag cgcgctactt aatggttctg cacagctcaa aatgctggct
     4381 tttggaccgc caattaattg tgctcctttc aggtacagac taaatgtcag ggacgtacca
     4441 atgaccacca aataaaaaaa cgccagaatc aaactgccgt taacgacaaa gtttgttcct
     4501 tgtctggcat aaaaaggcaa cagaatcaga ccgccaatca gcatactcca gccgacgact
     4561 ggtaacgtgc catagcgggc aattagcgtt gagggatagg tggtatagaa tgcagcagca
     4621 aatgccgagg caatgcccca gaacaacgcg gcaggagaga gcgataatga cgtcggatta
     4681 ccgtgtgtca ccaataaaaa agtcccgacc agcgatgtca aaatagcgca gaaaaccaga
     4741 atgcccgggc gcgatttacg caccagtgag aaccaggcga cgataatcgt cggtgagagg
     4801 aattgcagca ccgttgccgt ggctgcgttc gatttttcga tggttagcaa aaaagtgagc
     4861 tgtacagtta gcgcgccaac cacggaaaaa atcagcaggc taatggcatc tttatgattg
     4921 ttaataatag aaaagatttt atcgccatga acaaatgaca gcgtcagtag aatcaaaccg
     4981 gcgaatatca aacgcgtcat agtcaaaaac tgcgacgaca tctggctttg ctccatgatg
     5041 tattgcgcgc agacccctga acttccccac aacacggcgg caatcagaac gttcagcatc
     5101 ccctttctgg tggaacccat ttttccctct gcatactgtt ttgtcgttta tgtatgcagg
     5161 catgatagca aaaatggcga ggatggctct gtttgcgcca cgccgatttt tcttagccca
     5221 gactggtgag ctaaatatct ttaataaaca gcaggcaaat catcgcaata cccaacatcc
     5281 ctatcgccag ccagaacaac gcatggtagc tccagatttc aaccataatt ccgtcaacag
     5341 agccggcgat aatccagccg acgcgtgaag tatttgcata taacgttgtc gcagagccta
     5401 ttttttcagg cattaagtcc tgaaaataaa gcatgccga
//
LOCUS       DADMJE010000210         5437 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.213, whole genome shotgun sequence.
ACCESSION   DADMJE010000210 DADMJE010000000
VERSION     DADMJE010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5437
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.213"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..718
                     /locus_tag="JN001_003809"
     CDS             <1..718
                     /locus_tag="JN001_003809"
                     /inference="COORDINATES: protein motif:HMM:NF013544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9054869.1"
                     /translation="ASWLVEWKNATETQWLKDSPSQPLQQSLKDLERAYKNFFRKRAA
                     FPRFKKRGQNDAFRYPQVKLDQENSRIFLPKLGWMRYRNSRQVTGVVKNVTVSQSCGK
                     WYISIQTESEVSTPAHPSASMVGLDAGVAKLATLSDGTVFEPVNSFQKNQKTLARLQR
                     QLSRKVKFSNNWQKQKRKIQRLHSCIANIRRDYLHKVTTAVSKNHAMIVIEDLKVSNM
                     SKSAGVRSASRGAMSGQNQV"
     gene            670..1041
                     /locus_tag="JN001_003810"
                     /pseudo
     CDS             670..1041
                     /locus_tag="JN001_003810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001694063.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS200/IS605 family element transposase accessory
                     protein TnpB"
     gene            complement(1081..2295)
                     /gene="ydcO"
                     /locus_tag="JN001_003811"
     CDS             complement(1081..2295)
                     /gene="ydcO"
                     /locus_tag="JN001_003811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BenE family transporter YdcO"
                     /protein_id="HAY9054870.1"
                     /translation="MLRCLYAITYEVTMRLFSIPPPTLLAGFLAVLIGYASSAAIIWQ
                     AAIVARATTAQISGWMTALGLAMGVSTLTLTLWYRVPVLTAWSTPGAALLVTGLQGLT
                     LNEAIGVFIVTNALIVLCGITGLFARLMRIIPHSLAAAMLAEILLRFGLQAFASLDGQ
                     FTLCGSMLLVWLATKAVAPRYAVIAAMIIGIVIVIAQGDVVTTDVVFKPVLPTYITPD
                     FSFAHSLSVALPLFLVTVASQNAPGIAAMKAAGYSAPVSPLIVFTGLLALVFSPFGVY
                     SVGIAAITAAICQSPEAHPDKDQRWLAAAVAGIFYLLAGLFGSAITEMMAALPVSWIQ
                     MLAGLALLSTIGGSLYQALHNERERDAAVVAFLVTASGLTLVGIGSAFWGLIAGGVCY
                     VVLNLIADRNQY"
     gene            2348..2884
                     /locus_tag="JN001_003812"
     CDS             2348..2884
                     /locus_tag="JN001_003812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9054871.1"
                     /translation="MENLARFLSTTLKQLRQQRGWSLSRLAEATGVSKAMLGQIERNE
                     SSPTVATLWKIATGLNVPFSTFISPPQSATPSVYDPQQQAMVITSLFPYDPQLCFEHF
                     SIQMASGAISESTPHEKGVIEHVVVIDGQLDLCVDGEWQTLNCGEGVRFAADVTHIYR
                     NGGEQTVHFHSLIHYPRS"
     gene            2957..4918
                     /gene="rlhA"
                     /locus_tag="JN001_003813"
     CDS             2957..4918
                     /gene="rlhA"
                     /locus_tag="JN001_003813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415952.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA 5-hydroxycytidine C2501 synthase"
                     /protein_id="HAY9054872.1"
                     /translation="MTVSSHRLELLSPARDAAIAREAILHGADAVYIGGPGFGARHNA
                     SNSLKDIAELVPFAHRYGAKIFVTLNTILHDDELEPAQRLITDLYQTGVDALIVQDMG
                     ILELDIPPIELHASTQCDIRTVEKAKFLSDVGFTQIVLARELNLDQIRAIHQATDATI
                     EFFIHGALCVAYSGQCYISHAQTGRSANRGDCSQACRLPYTLKDDQGRVVSYEKHLLS
                     MKDNDQTANLGALIDAGVRSFKIEGRYKDMNYVKNITAHYRQMLDAIIEERGDLARAS
                     SGRTEHFFVPSTEKTFHRGSTDYFVNARKGDIGAFDSPKFIGLPVGEVLKVAKDHLDV
                     AVTEPLANGDGLNVMIKREVIGFRANTVEKTGENQYRVWPNEMPADLHKIRPHHPLNR
                     NLDHNWQQALTKTSSERRVAVDIELGGWQEQLILTLTSEEGVSITHTLDGQFDEANNA
                     EKAMNNLKDGLAKLGQTLYYARDVQINLPGALFVPNSLLNQFRREAADMLDAARLASY
                     QRGSRKPVAEPAPVYPQTHLSFLANVYNQKAREFYHRYGVQLIDAAYEAHEEKGEVPV
                     MITKHCLRFAFNLCPKQAKGNIKSWKATPMQLVNGDEVLTLKFDCRPCEMHVIGKIKN
                     HILKMPLPGSVVASVSPDELLKTLPKRKG"
     gene            complement(5010..5240)
                     /locus_tag="JN001_003814"
     CDS             complement(5010..5240)
                     /locus_tag="JN001_003814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YncJ family protein"
                     /protein_id="HAY9054873.1"
                     /translation="MFTKALSVVLLTCALFSGQLMAGHKGHEFVWVKNVDHQLRHEAD
                     SDELRAVAEESAEGLREHFYWQKSRKPEAGQR"
BASE COUNT         1427 a         1392 c         1374 g         1244 t
ORIGIN      
        1 ggcttcctgg ctggttgagt ggaaaaatgc cactgaaacg caatggctta aagattctcc
       61 ctcacagcca ttgcaacagt cactgaaaga ccttgagcgg gcttacaaaa acttcttccg
      121 gaagcgggct gcttttcccc gattcaaaaa gcggggacag aatgatgcat tccgctaccc
      181 gcaggttaag ctcgatcagg aaaacagccg tatttttctg ccgaaactgg gctggatgcg
      241 ctaccggaat agccgtcagg tcacgggtgt tgtgaaaaat gtcactgtca gccagtcctg
      301 cggtaagtgg tacatcagta ttcagacaga aagtgaagta tccactccgg ctcacccttc
      361 agcatcaatg gtcggactgg atgctggcgt ggctaaactc gccacgctgt cagatggcac
      421 agtctttgag cctgtaaaca gttttcagaa aaaccagaag acgctggcga gacttcagcg
      481 acagttaagc cgcaaggtca aattcagcaa caactggcag aagcagaaac gcaaaataca
      541 gcgactgcat tcctgtatcg caaatatccg cagggactac cttcacaaag tcacaacggc
      601 cgtcagcaaa aaccacgcaa tgatagtcat tgaggatttg aaggtcagca acatgtcaaa
      661 gtcagcaggg gtacggtcag ccagccgggg cgcaatgtcc gggcaaaatc aggtttaaac
      721 cgttcgatac tggatcaggg ctggtatgaa atgcaccgcc agcttgagta caagcagctc
      781 tggcgtggcg gtcaggtgct tgctgttccg ccagcgtata caagccagcg ttgcgcgtac
      841 tgtggtcata cagcgaaaga gaaccgcctg tcacaaagta aattcagatg ccaggtatgt
      901 ggatatacag cgaacgccga tgtaaatggc gctcgtaaca ttttagcggc ggggcacgcc
      961 gttcttgcct gtggagagat ggtgcagtca ggccgcccgt tgaagcagga acccaccgaa
     1021 atgattcagg cgacagcctg aacgtagcag ggatccacgt ctttcagggc gtgtaggatg
     1081 tcaatattgg tttctgtcag cgattaaatt caacaccacg taacaaacgc ctccggcaat
     1141 taatccccag aacgcagaac caatcccgac cagcgtcaat ccacttgccg ttaccagaaa
     1201 tgccaccacc gccgcgtcgc gctcacgctc attatgcagc gcctgataca aactgccgcc
     1261 aatggtactc aacagcgcca gacctgccag catctggatc caacttacgg gcagggcagc
     1321 catcatctcg gtaatggcac taccaaacag acctgcgagc aaatagaaaa tgcctgcaac
     1381 ggcagctgcc agccaacgtt gatctttatc cggatgcgct tccgggcttt ggcaaatagc
     1441 cgcggtgatt gccgcaatac cgacggaata aacgccgaaa ggggaaaaaa ccagtgccag
     1501 caatccagta aatacaatta atggcgaaac aggagccgaa tatccagctg ctttcattgc
     1561 tgcgataccc ggtgcgtttt gcgatgccac cgtcaccaga aaaaggggga gtgcaacgct
     1621 caggctgtga gcaaacgaaa aatcaggggt aatataagtg gggagaacgg gtttaaagac
     1681 aacatcagtt gtgacaacgt caccttgcgc gatgacgatc acgatcccaa taatcatcgc
     1741 ggcaattacc gcatagcgcg gcgcaacggc cttggttgcc agccatacca gcaacatact
     1801 tccacacaac gtaaattgac cgtccagact ggcaaacgcc tgtaaaccaa agcgtaataa
     1861 aatctcggca agcattgccg ccgcaagcga gtgcggaata atgcgcatca gacgagcaaa
     1921 gagtcccgtt atgccgcaga ggactattaa cgcgttggtg acaataaaaa cgccgatggc
     1981 ttcgttaagt gttagtccct gcaatccggt gaccaacaaa gccgcgccag gcgttgacca
     2041 tgcggtgaga acaggtacgc gataccataa tgtcagagtc agcgtactga cgcccattgc
     2101 cagccccagc gccgtcatcc agccagagat ttgtgcagtg gtggctctgg cgacaatcgc
     2161 tgcttgccag attattgccg ctgaactggc gtagccaatt aataccgcca gaaaccccgc
     2221 cagtagcgtg ggtggaggaa tagaaaacag acgcatagtc acctcgtacg ttatagcgta
     2281 caggcaccgt agcatttgtc cgttataacg cacaagtgat aaacttccgt tttgccggag
     2341 gagtcgcatg gaaaatctcg ctcgcttttt atccaccaca cttaaacaac tacgccagca
     2401 gcgcggctgg agtctttcgc gactggcaga agcgacgggc gtttctaaag caatgttagg
     2461 gcagattgag cgtaatgagt ccagtccgac ggtcgcgaca ttatggaaaa ttgccaccgg
     2521 gttgaacgta ccattttcaa catttatttc tccgccgcag tccgctacgc cttcagttta
     2581 tgatccacaa cagcaggcga tggtgatcac ttcgctgttt ccttatgatc cacaactctg
     2641 ctttgaacac ttctcgattc agatggcatc tggtgcaata agcgaatcga cgccccatga
     2701 gaagggggta atcgaacatg tcgtcgtcat tgatggacaa cttgatctgt gcgttgatgg
     2761 ggaatggcag acccttaatt gtggggaagg cgttcgattt gctgcagacg tcacgcatat
     2821 ctatcgtaat ggtggggagc aaaccgtaca ttttcattcc ctcatccatt acccgcgcag
     2881 ttaagcggga aaactatttc gcaacgtcgc gcttgtggct aaaatagccg ccatttttca
     2941 gctactggat aagaatgtga ccgtatcttc tcatcgactt gaactgttaa gcccggcacg
     3001 cgatgccgcc attgcccgcg aagctatttt gcacggtgcc gatgctgttt atatcggcgg
     3061 ccctggtttt ggtgcccgtc ataatgccag taatagcctg aaagatattg ccgagctggt
     3121 gccgtttgcc catcgttatg gtgcaaaaat tttcgtcacg cttaacacca ttttgcatga
     3181 tgatgagctg gaacccgcgc aacggctgat tactgacctc taccagaccg gtgtcgatgc
     3241 gctgattgtt caggatatgg ggattctgga acttgatatt ccgccgattg aactgcacgc
     3301 cagtacgcag tgcgacattc gtacagttga aaaagcgaag ttcctctctg atgttggctt
     3361 cacgcagatt gtgctggcgc gagagctgaa tcttgatcag atccgcgcga ttcaccaggc
     3421 tacggacgcg accattgaat tctttattca tggggcactg tgcgtggcct attcgggtca
     3481 gtgctacatt tctcatgcgc aaacagggcg tagcgccaac cgtggcgatt gctcgcaggc
     3541 gtgccgtttg ccatacacat tgaaagacga tcaggggcgg gtggtttcct atgaaaaaca
     3601 tctgctgtcg atgaaagata acgatcagac tgccaacctc ggcgcgctga ttgatgctgg
     3661 tgtacgctcc ttcaagattg aaggtcgtta caaagatatg aactacgtga agaatatcac
     3721 cgcccattat cgccagatgc ttgatgccat tattgaagaa cgtggcgatc tggcgcgcgc
     3781 ttcatcaggt cgtactgaac atttctttgt tccatcgacg gaaaagactt tccaccgtgg
     3841 tagcacagat tattttgtga atgcccgtaa aggcgatatt ggcgcgttcg attcgccgaa
     3901 atttatcggc ctgccggtgg gtgaagtatt gaaagtggcg aaagatcatc tcgatgttgc
     3961 cgtcaccgag ccactggcaa atggtgatgg cctgaacgtg atgattaaac gtgaagtcat
     4021 cggttttcgt gccaatacgg tcgagaaaac cggagaaaat cagtaccgcg tctggcccaa
     4081 tgaaatgcca gcagatttgc acaaaattcg tccacatcac ccactaaacc gtaatcttga
     4141 tcataactgg cagcaggcac tgacaaaaac ctccagcgaa cgtcgggtgg cggtagacat
     4201 tgaactgggc ggctggcagg aacaactgat tctgaccctc accagtgaag agggtgtcag
     4261 catcacgcat acgctggacg ggcagttcga cgaagccaat aacgccgaaa aagcaatgaa
     4321 caatctgaag gatggtctgg caaaactggg gcaaaccctc tattacgccc gcgatgtgca
     4381 aattaatttg ccgggggcgc tgtttgtacc aaacagtctg ttaaaccagt tccgccgtga
     4441 agctgctgac atgctggatg ctgcgcgtct tgccagttac cagcgcggca gccgtaaacc
     4501 ggttgctgag cctgcgccgg tttatccgca aacgcatctg agtttcctcg cgaacgtata
     4561 caaccagaaa gcgcgtgaat tttatcatcg ctatggtgtg cagctgattg acgcggcgta
     4621 tgaggcacat gaagagaagg gcgaagtccc ggtgatgatc accaagcatt gtctgcgctt
     4681 tgcctttaat ctgtgcccga aacaggcgaa aggcaatatc aaaagctgga aggcgacgcc
     4741 aatgcaactg gttaacggcg atgaagtatt aacgctaaag tttgattgcc gcccatgcga
     4801 gatgcacgtc attggcaaaa tcaaaaatca catactgaaa atgccgttac cgggaagcgt
     4861 agtggcatcc gtaagtccgg atgagctgct gaaaacattg cctaagcgaa aagggtaaaa
     4921 cgccagtttt ctggttactc acaactcatt gaatctgcat gatattgcct gccgggtaag
     4981 gcgtcacgcc gcatccggca tcaaacgact caacgttgtc ccgcttctgg tttgcgcgat
     5041 ttttgccagt aaaaatgctc gcgcaaacct tccgccgact cttccgccac agcacgcaat
     5101 tcatcgctgt ccgcttcatg acgcagctga tgatccacat tctttaccca cacaaattca
     5161 tgtcctttgt gccctgccat gagttgtcct gagaacagcg cacacgttaa taagacaacc
     5221 gataacgcct tcgtaaacat cctgccacct ttttcttacc ttttgccgct atgatgccga
     5281 tcgtttcttg aggttattat tcagttttgc aaattagcgc aaagaaattc tggaatcttc
     5341 cttcctgatt ttgcattgca ttctgtcgtt gcggcgattt agtgctattt tcgagcaaat
     5401 tacacacaga ggtaaacact aatgtttact ttgttga
//
LOCUS       DADMJE010000211         5337 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.214, whole genome shotgun sequence.
ACCESSION   DADMJE010000211 DADMJE010000000
VERSION     DADMJE010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5337
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.214"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JN001_003815"
                     /gene_synonym="yiiD"
     CDS             complement(890..1831)
                     /gene="fabY"
                     /locus_tag="JN001_003815"
                     /gene_synonym="yiiD"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001666856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid biosynthesis protein FabY"
                     /protein_id="HAY9054874.1"
                     /translation="MYHLRVPQTEEELERYYQFRWEMLRKPLHQPKGSERDAWDAMAH
                     HQMVVDEQGNLVAVGRLYINADNEASIRFMAVHPDVQDKGLGTLMAMTLESVARQEGV
                     KRVTCSAREDAVEFFAKLGFVNQGEITTPTTTPIRHFLMIKPVATLDDILHRGDWCAQ
                     LQQAWYEHIPLSEKMGVRIQQYTGQKFITTMPETGNQNPHHTLFAGSLFSLATLTGWG
                     LIWLMLRERHLGGTIILADAHIRYSKPISGKPHAVADLGALSGDLDRLARGRKARVQM
                     QVEIFGDETPGAVFEGTYIVLPAKPFGPYEEGGNEEE"
     gene            complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JN001_003816"
     CDS             complement(1876..2313)
                     /gene="dtd"
                     /locus_tag="JN001_003816"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000560980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HAY9054875.1"
                     /translation="MIALIQRVTRASVTVEGEVTGEIGAGLLVLLGVEKDDDEQKANR
                     LCERVLGYRIFSDAEGKMNLNVQQAGGSVLVVSQFTLAADTERGMRPSFSKGASPDRA
                     EALYDYFVERCRQQEMNTQTGRFAADMQVSLVNDGPVTFWLQV"
     gene            complement(2310..3183)
                     /locus_tag="JN001_003817"
                     /pseudo
     CDS             complement(2310..3183)
                     /locus_tag="JN001_003817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312836.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor BrkB family protein"
     gene            complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JN001_003818"
     CDS             complement(3177..3776)
                     /gene="yihX"
                     /locus_tag="JN001_003818"
                     /EC_number="3.1.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312835.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-1-phosphatase"
                     /protein_id="HAY9054876.1"
                     /translation="MLYIFDLGNVIVDIDFNRVLGAWSDLTRVPLATLKKSFHMGEAF
                     HQHERGEISDEAFAEALCHEMALPLSYEQFSHGWQAVFVALRPEVIAIMHKLREQGHR
                     VVVLSNTNRLHTTFWPEEYPEIRDAADHIYLSQDLGMRKPEARIYQHVLQAEGFSPSD
                     TVFFDDNADNIEGANQLGITSILVKDKTTIPDYFAKVLC"
     gene            complement(3917..4804)
                     /locus_tag="JN001_003819"
     CDS             complement(3917..4804)
                     /locus_tag="JN001_003819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001309103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase"
                     /protein_id="HAY9054877.1"
                     /translation="MKTERKNEHYLALQQAFDAPWPGPVGELVTLEKGNIHLQIYPHD
                     GARITSLKAFGSEVLRQWQPQRRAFQYGCFPMVPWAGRLGNATLNAGGQCYSLPANKP
                     PHALHGMACYSTWEIIDKTADSLTLRMPLASPWPWQGEVIQTFLLENDALVLQLEVHS
                     YADTFPASAGWHPWFAKKLTPQNTESLQVLFDADWQEEAGSDELPTGNRISPQAGPWD
                     DCFGFYNGVKVKLLWPGKLAMTMISSANSLVVFDKQPDATCINPLTQAPNAINLTPEL
                     VTPDRPLVIETRWQFTPES"
     gene            complement(4794..>5337)
                     /locus_tag="JN001_003820"
     CDS             complement(4794..>5337)
                     /locus_tag="JN001_003820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MHS family MFS transporter"
                     /protein_id="HAY9054878.1"
                     /translation="GIVYISSQLVLSRDIPLTGMLIASAIGIFSCPLVGWLSDRIGQK
                     SLYLSGAGFCVLFAFPFFLLLDSKSTLIIWCSMILGYNLGPTMMFAVQPTLFTRMFGT
                     KVRYTGLSFAYQFSAILGGLSPLIASSLLALGGGKPWYVALFLFAVSVLSFVCVWLIE
                     PTDEQETASYRYIREQSHEN"
BASE COUNT         1440 a         1346 c         1253 g         1298 t
ORIGIN      
        1 ctgataaatg aagaaaaacc gtattcatcg ccattaccac caccttacct atattactca
       61 ttaatgtatg tgcgaaaatt acgccggaaa atcattaaaa aaagcggatt tttgcatgtt
      121 gttttgtttt tgcgaggcgt tttccagaaa taataagagt gttgcagttg tttcatttat
      181 tactcaaaaa tggtttagtt atcgcccagg atgaattatg ggtgctatga atatattata
      241 ttcagagata tttatttgca taatctgaat ggtgtagccg aaaaacgtca gcatcctaac
      301 agcaccagga tttaaggtga aattaatctt tcatcacaga ccggtcagta ctgccaccaa
      361 ccggtcttta cttgctcatc gttataattt tgttggtaac agttcgggaa agttgttttt
      421 ctaaattaac aacagaataa ctttcttgtt taatgagatt aatattggca accattatag
      481 cctccttccc acggtttaag agcaaacata caacataatg attcataaca tacagagcag
      541 taaatgaatg atactgacaa tgatgccagc ccattatctt tgcataatgt ttgtgagcta
      601 tagattttaa aaatatttat gaggaaagta tggcaccaga ggaggttttg actatcaaaa
      661 atcgctcaaa cctgaactaa gatgatgagt taagcattat ctgcgataat tgccactcag
      721 ctctacaaat aatatttaaa tgctcctgaa cagtgatgta gcaagacacg tatggtgcca
      781 acgaagaata aaaatttata gagttcttat tcaatattac cggcatagac agggaatgat
      841 gtaaatgacc ggaatgaatg agagaggcag caccgcccct ctccataagc tactcttctt
      901 cgttcccgcc ctcttcatac gggccaaatg gcttcgcggg cagaacgata tacgtgcctt
      961 caaacactgc acccggcgtc tcgtcgccaa agatttcaac ttgcatctgc acccgtgctt
     1021 ttcgtccgcg cgccagacgg tcgagatcgc cgcttaaggc accaaggtcg gctaccgcat
     1081 gaggtttacc gctaatcggc ttgctgtagc ggatatgcgc atcggccaga ataatcgttc
     1141 cgccgaggtg gcgttcgcgc agcatcagcc agataagccc ccaaccggtg agcgttgcca
     1201 gcgagaataa actcccggca aacagcgtat ggtgcggatt ctgattaccg gtttccggca
     1261 tggtggtgat aaatttttgc ccggtatatt gctgaatgcg cacgcccatt ttttcactaa
     1321 gcgggatgtg ttcgtaccac gcctgttgca gctgcgcgca ccagtcgccg cgatgcaaaa
     1381 tatcatccag agtggcaaca ggtttaatca tcaaaaaatg gcgaatcggc gtggtggttg
     1441 gtgtggtgat ttctccctga ttaacaaacc ccagcttggc gaaaaactcc accgcgtctt
     1501 cacgggcgct acaggtcacg cgcttaacgc cttcctgacg cgccaccgac tccagggtca
     1561 tcgccatcaa cgtccccagc cctttgtcct gcacgtcggg atgaacggcc ataaagcgaa
     1621 tggacgcttc attgtcggca ttaatataca gtcggcctac cgccaccaga ttcccctgct
     1681 cgtcgacgac catctgatga tgcgccatcg catcccacgc gtcgcgttcc gaaccttttg
     1741 gttgatgcag gggcttacgc aacatttccc agcgaaactg atagtaacgc tctaactctt
     1801 cttctgtttg tggaacccga aggtgataca tagcgatact ctctcttgtt tcccgtgaca
     1861 accctggaag ctggctcata cctgcaacca gaatgtcacg gggccatcat tgaccagcga
     1921 tacctgcata tcggcagcga agcgtcctgt ttgcgtgttc atctcttgct ggcggcagcg
     1981 ttcgacgaaa tagtcatata acgcctctgc gcgatccggt gatgcgcctt tggagaaact
     2041 tgggcgcatc ccccgttcgg tatctgcggc gagggtaaac tgggaaacca ccagtacact
     2101 gccgcccgcc tgttgcacgt tgagattcat cttgccttcg gcatcgctaa agatgcggta
     2161 gccgagcaca cgctcgcaca gacggtttgc tttctgttcg tcgtcatcct tttcgacacc
     2221 caataacacc aaaagtcccg cgccaatttc gcccgtcact tctccctcca cggtgacgct
     2281 ggcacgggtt acgcgttgaa ttaatgcaat catggttcgt cgtcttcttc ttgttcagct
     2341 gcttgtttta gtttgcggta ttccccgaga gtgacagtaa tttccgcgcc aagcaagacg
     2401 atacaccatg tccagtagac ccaaacaaag agaatgggga tcaccgccag cacaccgtaa
     2461 atgagctgat atgacgggaa catggtgata taaagcgcga aacctttctt tcctgcttcg
     2521 aacaggagtg cggcgacaaa cgcgccgaca atcgcgtcgc ggttaggtac gcggatggta
     2581 ggaacaatgc tgtacagcaa ccagaaggag atccacgaca acagcaacgg aaaaatacgc
     2641 agcacgttgt cgatgacagt attgagatcg ctcgcccagc gcagggagag caaataggaa
     2701 ctgatcgcca gactggcccc tgccagcagc ggccccagcg ttaaaatcat ccagtacacg
     2761 gcgaacgagt aaatttttgg tcgcgctcgt ttactgcgcc agatggtatt caacgcgcta
     2821 tcgatggagt acatcaacaa taacgcggtg acgatcagcc cgcacgcccc aacggcggtc
     2881 atcttgttgg aattggcaac aaattgttcg atataccgct gaataacatc gccagtagca
     2941 ggcagaaagt tggcaaaaat aaagtgacgt aactgaatgc tgacgtcgga aaacatggga
     3001 aaagcggcga aaagcgcaaa aacaacggca accagcggca ctaatgagag caacgaccac
     3061 ataggcaagg ttacctgcca gggttgtcat gttgtcctca tcaatacgtt gccagagtag
     3121 ttttagccag gcccatagtg gacgggtacg gtgcctggct ttgtcctgaa tggtttttag
     3181 cataacacct tcgcgaaata gtccgggatg gtggttttat ctttcaccag aatactggta
     3241 atgcccagct gattggctcc ttctatatta tcggcgttat cgtcgaaaaa gaccgtatcg
     3301 ctgggtgaaa aaccttccgc ctgcaaaaca tgctggtaaa ttcgtgcttc aggtttgcgc
     3361 atccccagat cttgcgacag atagatatgg tcagcagcat cacgaatttc cgggtattct
     3421 tccggccaga aggtggtatg caggcggttg gtattggaaa gcaccaccac gcgatgcccc
     3481 tgctcacgca gtttatgcat gatggcgatc acttccgggc gcagcgcaac aaacaccgcc
     3541 tgccagccgt gagagaactg ctcgtagctt agcggtagag ccatctcatg acacagcgcc
     3601 tctgcgaacg cttcgtcgct aatttcccca cgctcatgct gatgaaacgc ctcccccata
     3661 tgaaaactct tcttaagcgt agccagtgga acacgcgtta aatcgctcca ggctcccagc
     3721 acacggttaa agtcgatatc gacaatcaca ttacctaaat caaagatata gagcattttt
     3781 gcctcctttc gcgccacaag aaattaactg tagcgggaaa ggatgggttt ggctatgtgg
     3841 caataagggt aatcttgtga tgctgattgc gaaaaagcag agtaatttca ctggcttttt
     3901 cgcaatagat gaatggttaa gattcaggtg taaattgcca acgagtttcg atgaccagcg
     3961 gcctatctgg tgtcaccaat tccggcgtta gatttattgc gttaggtgcc tgagtcagcg
     4021 ggttaataca ggtggcatcg ggctgtttat caaataccac cagactgttt gcagaagaga
     4081 tcatggtcat cgcgagttta ccaggccaca gtaacttaac cttcaccccg ttataaaaac
     4141 caaaacagtc atcccaggga ccggcttgag gagagatacg atttccagtt ggcagttcat
     4201 cactacccgc ttcttcttgc cagtccgcat caaaaagcac ctgcaacgat tctgtatttt
     4261 gcggagtcag ctttttcgca aaccacggat gccagccagc ggaggccggg aatgtatcgg
     4321 catatgaatg gacttccagt tgcaaaacca gcgcatcgtt ctccagcaaa aaagtctgaa
     4381 tcacttcccc ttgccagggc cacggtgaag ccaggggcat acgtaaagtc agggaatctg
     4441 ctgttttgtc gatgatttcc cacgttgagt aacaagccat accatgcaac gcatgtggtg
     4501 gtttattggc gggtaaagaa taacattgcc caccagcatt cagcgtcgca ttccccagtc
     4561 gccctgccca cggcaccatt gggaaacagc catactgaaa agctctgcgc tgcggctgcc
     4621 attggcgtaa tacttcagaa ccaaatgcct ttaacgaggt tatcctggca ccatcatgcg
     4681 gataaatctg caggtgaata ttgccttttt ccagcgtcac taactctcct acaggcccag
     4741 gccatggcgc gtcaaacgcc tgttgtagcg ccaggtaatg ctcgtttttt cgttcagttt
     4801 tcatgagatt gttccctgat gtagcggtaa gaagcggttt cttgttcatc ggtcggctca
     4861 atcagccaga cgcaaacaaa ggaaagaact gagacagcaa ataaaaacag agcgacatac
     4921 cacggttttc ctccccctag cgccagcaaa cttgaggcga taagggggct tagtccgcca
     4981 agaatcgcgg aaaattgata agcaaaagaa aggccggtat atcgtacttt ggtaccgaac
     5041 atgcgggtga aaagtgttgg ctgcacggca aacatcatcg tcggacctaa gttgtagccg
     5101 aggatcatac tgcaccagat gatgagcgta cttttgctat ccagtaataa gaagaaagga
     5161 aacgcgaaca ggacacaaaa tcctgctccc gacaaataca gacttttttg acctatacga
     5221 tctgataacc atccaaccaa tggacaactg aaaataccga tcgccgaggc aatcaacata
     5281 cccgtcaggg gaatatctcg cgacaatact aattggctgg aaatatagac aatacca
//
LOCUS       DADMJE010000212         5311 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.215, whole genome shotgun sequence.
ACCESSION   DADMJE010000212 DADMJE010000000
VERSION     DADMJE010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5311
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.215"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..800
                     /locus_tag="JN001_003821"
     CDS             <1..800
                     /locus_tag="JN001_003821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001079584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY9054879.1"
                     /translation="SITNLNNQVTNLDTRVTNIENGIGDIVTTGSTKYFKTNTDGVDA
                     NAQGKDSVAIGSGSIAAADNSVALGTGSVAEEENTISVGSSTNQRRITNVAAGVNATD
                     AVNVSQLKSSEAGGVRYDTKADGSIDYSNITLGGGNGSTTRISNVSAGVNNNDAVNYA
                     QLKQSVQETKQYTDQRMVEMDNKLSKTESKLSGGIASAMAMTGLPQAYTPGASMASIG
                     GGTYNGESAVALGVSMVSANGRWVYKLQGSTNSQGEYSAALGAGIQW"
     gene            1168..2823
                     /gene="lldP"
                     /locus_tag="JN001_003822"
     CDS             1168..2823
                     /gene="lldP"
                     /locus_tag="JN001_003822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HAY9054880.1"
                     /translation="MNLWQQNYDPAGNIWLSSLIASLPILFFFFALIKLKLKGYVAAS
                     WTVAIALAVALLFYKMPVANALASVVYGFFYGLWPIAWIIIAAVFVYKISVKTGQFDI
                     IRSSILSITPDQRLQMLIVGFCFGAFLEGAAGFGAPVAITAALLVGLGFKPLYAAGLC
                     LIVNTAPVAFGAMGIPILVAGQVTGIDSFEIGQMVGRQLPFMTIIVLFWIMAIMDGWR
                     GIKETWPAVVVAGGSFAIAQYLSSNFIGPELPDIISSLVSLLCLTLFLKRWQPVRVFR
                     FGDLGASQVDMTLAHTGYTAGQVLRAWTPFLFLTATVTLWSIPPFKALFASGGALYEW
                     VINIPVPYLDKLVARMPPVVSEATAYAAVFKFDWFSATGTAILFAALLSIVWLKMKPS
                     DAISTFGSTLKELALPIYSIGMVLAFAFISNYSGLSSTLALALAHTGHAFTFFSPFLG
                     WLGVFLTGSDTSSNALFAALQATAAQQIGVSDLLLVAANTTGGVTGKMISPQSIAIAC
                     AAVGLVGKESDLFRFTVKHSLIFTCMVGVITTLQAYVLTWMIP"
     gene            2823..3599
                     /gene="lldR"
                     /locus_tag="JN001_003823"
     CDS             2823..3599
                     /gene="lldR"
                     /locus_tag="JN001_003823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator LldR"
                     /protein_id="HAY9054881.1"
                     /translation="MIVLPRRLSDEVADRVRALIDEKNLEAGMKLPAERQLAMQLGVS
                     RNSLREALAKLVSEGVLLSRRGGGTFIRWRHDTWSEQNIVQPLKTLMADDPDYSFDIL
                     EARYAIEASTAWHAAMRATPGDKEKIQLCFEATLSEDPDIASQADVRFHLAIAEASHN
                     IVLLQTMRGFFDVLQSSVKHSRQRMYLVPPVFSQLTEQHQAVIDAIFAGDADGARKAM
                     MAHLSFVHTTMKRFDEDQARHARITRLPGEHNEHSREKNA"
     gene            3596..4786
                     /gene="lldD"
                     /locus_tag="JN001_003824"
     CDS             3596..4786
                     /gene="lldD"
                     /locus_tag="JN001_003824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinone-dependent L-lactate dehydrogenase"
                     /protein_id="HAY9054882.1"
                     /translation="MIISAASDYRAAAQRILPPFLFHYMDGGAYSEYTLRRNVEDLSE
                     VALRQRILKNMSDLSLETTLFNEKLSMPVALAPVGLCGMYARRGEVQAAKAADTHGIP
                     FTLSTVSVCPIEEVAPAIKRPMWFQLYVLRDRGFMRNALERAKAAGCSTLVFTVDMPT
                     PGARYRDAHSGMSGPNAAMRRYLQAVTHPQWAWDVGLNGRPHDLGNISAYLGKPTGLE
                     DYIGWLGNNFDPSISWKDLEWIRDFWDGPMVIKGILDPEDARDAVRFGADGIVVSNHG
                     GRQLDGVLSSARALPAIADAVKGDIAILADSGIRNGLDVVRMIALGADTVLLGRAFLY
                     ALATAGQAGVANLLNLIEKEMKVAMTLTGAKSISEITQDSLVQGLGKELPAALAPMAK
                     GNAA"
     gene            5029..>5311
                     /locus_tag="JN001_003825"
     CDS             5029..>5311
                     /locus_tag="JN001_003825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY9054883.1"
                     /translation="MTESSDYESVQVFIGVDVGKDTHHAVAINRSGKRLFDKALPNDE
                     NKLRSLISDLKQHGQILLVVDQPATIGALPVAVARSEGVLVGYLPGLAMR"
BASE COUNT         1169 a         1415 c         1437 g         1290 t
ORIGIN      
        1 agagcattac taacctgaac aatcaggtca ctaatctgga tactcgcgtt actaatatcg
       61 aaaacggtat tggcgacatt gtcaccaccg gtagcaccaa gtacttcaag accaacaccg
      121 atggcgtaga tgccaacgcc cagggtaaag atagcgttgc tattggttct ggttccattg
      181 ctgccgctga caacagcgtc gcactgggta ccggttccgt tgcagaggaa gaaaatacaa
      241 tctctgtagg ttcttctact aaccaacgcc gtatcaccaa cgtagctgcc ggtgttaatg
      301 ccaccgatgc ggttaacgtg tcgcagctga aatcttctga agcaggcggc gtgcgctacg
      361 acaccaaagc tgatggttct atcgactata gcaatatcac cctcggtggt ggcaacggca
      421 gtacgactcg tatcagcaac gtctccgctg gcgtcaacaa caacgacgcg gtgaactacg
      481 cgcagttgaa gcaaagcgtg caggaaacga agcaatacac cgatcagcgg atggttgaga
      541 tggataacaa actgtctaaa actgaaagca agttgagcgg tggtatcgct tctgcaatgg
      601 caatgaccgg tctgccgcag gcttatacac cgggtgccag catggcttct attggtggcg
      661 gtacttacaa cggtgaatcg gcagttgctt taggtgtatc gatggtgagc gccaatggtc
      721 gttgggtcta caaattacaa ggtagtacca atagccaggg tgaatactcc gccgcactcg
      781 gtgccggtat tcagtggtaa tgatccatta agttagtgtg actaagggca aacgccaaat
      841 tgcctgatgc gttacgcgca tcaggcaaga taaggcgctc cgggtcaaca atctaagggc
      901 aattctctga tgaggattgc ccttttcttt accagacatc tccccccaca agaattggcc
      961 ctaccaattc ttcgcttatc tgacctctgg ttcacaattc cccaattaaa actcacatca
     1021 atattgccaa tacacaacat ttagttaacc attcattgtc attatcccta cacaacacaa
     1081 ttggcagtgc cacttttaca caacgtgtga caaggagatg agcaacagac tcattacacg
     1141 atgtgcgtgg actccaggag acctgcaatg aatctctggc aacaaaacta cgatcccgcc
     1201 gggaatatct ggctttccag tctgatagca tcgcttccca tcctgttttt cttctttgcg
     1261 ctgattaagc tcaaactgaa aggatacgtc gccgcctcat ggacggtagc aatcgccctt
     1321 gccgtggctt tgctgttcta taaaatgccg gtcgctaacg cgctggcctc ggtggtttat
     1381 ggcttcttct atggtttgtg gcccatcgcg tggatcatta ttgcagcagt gttcgtctat
     1441 aagatctcgg tgaaaaccgg gcagtttgac atcattcgct cgtctattct ttcgataacc
     1501 cctgaccagc gtctgcaaat gctgatcgtc ggtttctgtt tcggcgcttt ccttgaagga
     1561 gccgcaggct ttggcgcacc ggtagcaatt accgccgcat tgctggtcgg cctgggtttt
     1621 aaaccgctgt acgccgccgg actgtgcctg attgttaaca ccgcgccagt ggcatttggc
     1681 gcgatgggca ttccaatcct ggttgccgga caagtaacag gcatcgacag ttttgagatt
     1741 ggccagatgg tggggcgtca gctaccgttt atgaccatta tcgtgctgtt ctggatcatg
     1801 gcgattatgg acggctggcg cggtatcaaa gagacgtggc ctgcggtcgt ggttgcgggc
     1861 ggctcgtttg ccatcgctca gtaccttagc tccaacttca ttgggccgga gctgccggac
     1921 atcatctctt cgctggtatc actgctctgc ctgacgctgt tcctcaaacg ctggcaacca
     1981 gttcgcgtat tccgcttcgg tgacttgggg gcgtcacagg ttgatatgac gctggcccac
     2041 accggttaca ccgcgggtca ggtgttacgt gcctggacac cgttcctgtt cctgaccgct
     2101 accgtaacac tgtggagcat cccgccgttt aaagccctgt tcgcatcggg tggtgcgctg
     2161 tatgagtggg tgatcaacat tccggtgccg tacctcgata aactggttgc ccgtatgcca
     2221 ccagtggtca gcgaggctac agcctatgcc gccgtgttta agtttgactg gttctctgcc
     2281 accggcaccg ccattctgtt tgctgcactg ctctcgattg tctggctgaa gatgaaaccg
     2341 tctgacgcta tcagcacctt cggcagcacg ctgaaagaac tggctctacc catctactcc
     2401 atcggcatgg tgctggcgtt cgcctttatc tcgaactatt ccggactgtc atcaacactg
     2461 gcactggcac tggcgcacac cggtcatgca ttcaccttct tctcgccgtt cctcggctgg
     2521 ctgggggtat tcctgaccgg gtcggatacc tcatctaacg ccctgttcgc cgcgctgcaa
     2581 gccaccgcag cacaacaaat tggcgtctct gatctgttgc tggttgccgc caataccacc
     2641 ggtggcgtca ccggtaagat gatctccccg caatctatcg ctatcgcctg tgcggcggta
     2701 ggcctggtgg gcaaagagtc tgatttgttc cgctttactg tcaaacacag cctgatcttc
     2761 acctgtatgg tgggcgtgat caccacgctt caggcttatg tcttaacgtg gatgattcct
     2821 taatgattgt tttacccaga cgcctgtcag acgaggttgc cgatcgtgtg cgggcgctga
     2881 ttgatgaaaa aaacctggaa gcgggcatga agttgcccgc tgagcgccaa ctggcgatgc
     2941 aactcggcgt atcacgtaat tcactacgcg aggcgctggc aaaactagtg agcgaaggcg
     3001 tgctgctcag tcgacgcggc ggcgggacgt ttattcgctg gcgtcatgac acatggtcgg
     3061 agcaaaacat cgtccagccg ctaaaaacgc tgatggccga tgatccggat tacagtttcg
     3121 atattctgga agcccgctac gccattgaag ccagcaccgc atggcatgcg gcaatgcgcg
     3181 ccacacctgg cgacaaagaa aagattcagc tttgctttga agcaacgcta agtgaagacc
     3241 cggatatcgc ctcacaagcg gacgttcgtt ttcatctggc gattgccgaa gcctcacata
     3301 acatcgtgct gctgcaaacc atgcgcggtt tcttcgatgt cctgcaatcc tcagtgaagc
     3361 atagccgtca gcggatgtat ctggtgccac cggttttttc acaactgacc gaacaacatc
     3421 aggctgtcat tgacgccatt tttgctggtg atgccgacgg ggcgcgtaaa gcaatgatgg
     3481 cgcaccttag ttttgttcac accaccatga aacgattcga tgaagatcag gctcgccacg
     3541 cacggattac ccgcctgccc ggtgagcata atgagcattc gagggagaaa aacgcatgat
     3601 tatttccgca gccagcgatt atcgcgccgc agcgcaacgc attctgccgc cgttcctgtt
     3661 ccactatatg gatggtggtg catattctga atacacgctg cgccgcaacg tggaagattt
     3721 gtcagaagtg gcactgcgcc agcgtattct gaaaaacatg tccgacttaa gcctggaaac
     3781 gacgctgttt aatgagaaat tgtcgatgcc ggtagcactg gcaccggtgg gtttgtgtgg
     3841 catgtatgcg cgtcgtggcg aagttcaggc agccaaagcg gcggacacgc atggcattcc
     3901 gtttactctc tcgacggttt ccgtttgccc gattgaagaa gtcgcgccag ccatcaagcg
     3961 cccaatgtgg ttccagcttt atgtactgcg cgatcgcggc tttatgcgta acgcgctgga
     4021 gcgagcaaaa gcagcgggtt gttcgacgct ggttttcacc gtggatatgc cgacaccggg
     4081 cgcacgctac cgtgatgcgc attcaggtat gagcggccca aatgcggcaa tgcgccgcta
     4141 cttgcaggcg gtgacgcatc cgcaatgggc gtgggatgtg ggcctgaacg gtcgtccaca
     4201 tgatttaggt aatatctcag cttatctcgg caaaccaacc ggactggaag attacatcgg
     4261 ctggctgggg aataacttcg atccgtccat ctcatggaaa gaccttgagt ggatccgcga
     4321 tttctgggat ggcccgatgg tgatcaaagg gatcctcgat ccggaagatg cgcgcgatgc
     4381 agtacgtttt ggtgctgatg gaattgtggt ttctaaccac ggtggccgcc agctggacgg
     4441 tgtactctct tccgctcgtg cgttgcccgc tattgcagat gcggtgaaag gtgatatcgc
     4501 cattctggcg gatagcggaa ttcgtaacgg gcttgatgtc gtgcgtatga ttgcgctcgg
     4561 tgccgacacc gtactgctgg gtcgtgcttt cctgtatgcg ctggcaacag cgggccaggc
     4621 gggtgtagct aacctgctaa atctgatcga aaaagagatg aaagtggcga tgacgctgac
     4681 tggcgcgaaa tcgatcagtg aaattacgca agattcgctg gtgcaagggc tgggtaaaga
     4741 gttgcctgcg gcactggctc ccatggcgaa agggaatgcg gcatagtcgt ttgcgccccc
     4801 gttactttat tcgtacccct tataatgggg tgttagccag ccagacccgg catgattact
     4861 gcccccagtc gtccatgatc cggggggggg atgtcaccgg gtctggtggg gcgctggtaa
     4921 ccgctaatag gggtcaggtc aggcactttt gccgggaccg tctgtaacgt ggatgccggt
     4981 acctgctccc cgtggttatc tggttaaccc atatacaagg gagacagaat gaccgaatcc
     5041 agcgattacg aatccgtcca ggtctttatc ggcgttgatg tcggtaaaga tacgcatcac
     5101 gctgttgcca ttaatcgttc aggtaaacgc ctgttcgata aagcattacc caacgacgaa
     5161 aacaaactca gatcgctaat atctgacctg aaacaacatg gtcagatact gctggttgtt
     5221 gatcagccag ctaccatcgg tgcgttacct gtcgccgttg cccgctcaga aggagtcctt
     5281 gtcggatacc tccctggact ggccatgcgc c
//
LOCUS       DADMJE010000213         5208 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.216, whole genome shotgun sequence.
ACCESSION   DADMJE010000213 DADMJE010000000
VERSION     DADMJE010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 5208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5208
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.216"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..117
                     /locus_tag="JN001_003826"
     CDS             <1..117
                     /locus_tag="JN001_003826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YiiG family protein"
                     /protein_id="HAY9054884.1"
                     /translation="DWDKEQLQDANSSWMVEDSFPRALREYNEMVDDYNSLR"
     gene            complement(167..1915)
                     /locus_tag="JN001_003827"
     CDS             complement(167..1915)
                     /locus_tag="JN001_003827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIA"
                     /protein_id="HAY9054885.1"
                     /translation="MLNERQLKIVDLLEQQPRTPGELAQQTGVSGRTILRDIDYLNFT
                     LNGKARISASGSAGYQLEIFERRSFFQLLQKHDNDYRLLALLLLNTFTPRAQLASALN
                     LPETWVAERLPRLKQRYERACCLASRPGLGHFIDETEEKRVILLANLLRKDPFLIPLA
                     GVTRDNLQHLSTACDNQHRWPLMQGDYLSSLILAIYALRNQLTDEWPQYPGDEIKQIV
                     EQSGMFLGDNAVRTLTGLIEKQHQQAQVISADHVLGLLQRVPDIASLNIIDTQLVENI
                     TGHLLRCLAAPVWIAEHRQSSMNNLKAAWPAAFDMSLHFITLLREQLDIPLFDNDLIG
                     LYFACALERHQNERQPIILLSDQNAIATINQLAIERDVLNCRVIIARSLSELVAIREE
                     IEPLLIINNSHYLLEDAVNNYITVKNIITAAGIEQIKHFLATAFIRQQPERFFSAPGS
                     FHYSNVRGESWQHITRQICAQLVAQHHITADEAQRIIAREGEGENLIVNRLAIPHCWS
                     EQERRFRGFFITLAQPVEVNNEVINHVLIACAAADARHELKIFSYLASILCQHPAEVI
                     AGLTGYEAFMELLHKG"
     gene            complement(1915..2985)
                     /locus_tag="JN001_003828"
     CDS             complement(1915..2985)
                     /locus_tag="JN001_003828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709702.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HAY9054886.1"
                     /translation="MNIELLQQLCEASAVSGDEQEVRDILINTLEPCVNEITFDGLGS
                     FVARKGNKGPKVAVVGHMDEVGFMVTHIDESGFLRFTTIGGWWNQSMLNHRVTIRTHK
                     GVKIPGVIGSVAPHALTEKQRQRPLSFDEMFIDIGANSRDEVEKRGVAMGDFISPEAN
                     FACWGEDKVVGKALDNRIGCAMMAELLQTVNNPEITLYGVGSVEEEVGLRGAQTSAEH
                     IKPDVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLFDKRYFPNQKLVAALKSCAAH
                     NDLPLQFSTMKTGATDGGRYNVMGGGRPVVALCLPTRYLHANSGMISKADYDALLTLI
                     RDFLTTLTAEKVNAFSQFRQMD"
     gene            complement(2975..4426)
                     /locus_tag="JN001_003829"
     CDS             complement(2975..4426)
                     /locus_tag="JN001_003829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418335.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose-like transporter subunit IIBC"
                     /protein_id="HAY9054887.1"
                     /translation="MESSLRIVAITNCPAGIAHTYMVAEALEQKARSLGHTIKVETQG
                     SSGVENRLSSEEIAAADYVILATGRGLSGDDRARFTGKKVYEIAISQALKNIDQIFSE
                     LPTNSQLFAADSGVKLGKQEMQSGSVMSHLMASVSAALPFVIGGGILVALANMLVQFG
                     LPYTDMSKGAPSFTWVVESIGYLGFTFMIPIMGAYIASSIADKPAFAPAFLVCYLAND
                     KALLGTQSGAGFLGAVVLGLAIGYFVFWFRKVRLGKALQPLLGSMLIPFVTLLVFGVL
                     TYYVIGPVMSDLMGGLLHFLNTIPPSMKFAAAFLVGAMLAFDMGGPINKTAWFFCFSL
                     LEKHIYDWYAIVGVVALMPPVAAGLATFIAPKLFTRQEKEAASSAIVVGATVATEPAI
                     PYALAAPLPMITANTLAGGITGVLVIAFGIKRLAPGLGIFDPLIGLMSPVGSFYLVLA
                     IGLALNISFIIVLKGLWLRRKAKAAQQELVHEH"
     gene            complement(4437..4883)
                     /locus_tag="JN001_003830"
     CDS             complement(4437..4883)
                     /locus_tag="JN001_003830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIA"
                     /protein_id="HAY9054888.1"
                     /translation="MAALTASCIDLNIQGNGAYSVLKQLATIALQNGFITDSHQFLQT
                     LLLREKMHSTGFGSGVAVPHGKSACVKQPFVLFARKAQAIDWKASDGEDVNCWICLGV
                     PQSGEEDQVKIIGTLCRKIIHKEFIHQLQQGDTDQVLALLNQTLSS"
BASE COUNT         1318 a         1341 c         1316 g         1233 t
ORIGIN      
        1 gactgggata aagagcaact tcaggacgca aactcaagct ggatggtcga agactctttc
       61 ccgagagcat tacgcgagta caacgaaatg gttgatgact ataatagcct gcgttaaacg
      121 tttttgatga taaatgcagt gtcggatgcg gcgcatctga cacagttcac cccttgtgaa
      181 gtaactccat aaatgcctca tatcctgtta acccggcaat aacctctgcc ggatgctgac
      241 acaatatgct tgccagatag ctaaatattt ttagctcatg acgcgcatcg gcggcggcgc
      301 aggcgatcaa gacatggtta atgacttcgt tattcacctc aactggttgg gcgagggtaa
      361 taaaaaatcc acgaaaacgt cgctcctgtt cgctccagca atgtgggatg gcgaggcgat
      421 taacaatcag gttttcacct tcgccttcgc gggcgatgat gcgttgtgct tcatcggcgg
      481 taatatggtg ttgtgcgact aattgcgcac aaatttgccg ggtaatatgt tgccagcttt
      541 caccgcgtac attcgaataa tgaaaacttc cgggggcaga gaaaaaacgc tccggttgct
      601 ggcgaataaa tgccgtcgcc agaaaatgtt ttatttgttc gataccggca gccgtaatga
      661 tattttttac ggtgatgtaa ttatttaccg cgtcttccag taaataatgg ctattgttaa
      721 tgatcaataa cggctcaatc tcttcgcgaa tggcaacaag ttcgcttaag ctacgggcaa
      781 taattacccg acaatttaaa acatcgcgct caatggcgag ctgattaata gtggcaatcg
      841 cgttctggtc cgagagcaaa atgatcggct ggcgttcgtt ttgatgccgc tccagcgcac
      901 aggcaaaata caaaccgatc agatcgttgt cgaaaagggg aatatcgagc tgttcacgca
      961 gtagcgtaat aaagtgcaga ctcatatcaa aggccgcagg ccaggctgct ttcaggttat
     1021 tcatgctact ttggcggtgc tcagcaatcc acaccggtgc ggcaaggcaa cgtaataaat
     1081 gcccggtaat attctcaacc aactgcgtat caataatatt caatgacgcg atgtctggca
     1141 ccctttgcag caaccccagc acatgatcgg ctgaaattac ctgcgcttgc tgatgctgtt
     1201 tctctatcaa acctgtcagg gttcttacag cgttatcacc aagaaacatg ccgctttgtt
     1261 caacgatttg ttttatctcg tcaccgggat attgcggcca ctcatcggtc agttgattac
     1321 gcagggcgta aatcgccaga atcaggctgg agagataatc accctgcatg agcggccagc
     1381 ggtgttggtt gtcgcaggcc gtggataaat gctgaaggtt gtctcgtgtt acgcccgcca
     1441 gcggaattaa aaacggatct ttgcgcagca agttcgccag caagataacg cgcttctctt
     1501 ctgtctcatc aatgaaatgg cccaaaccgg ggcggctggc caggcaacaa gcgcgttcat
     1561 aacgctgttt taaccggggc agacgctctg cgacccacgt ttctggcaaa ttaagcgccg
     1621 aggcgagttg cgcacgggga gtaaaggtat tcagtaataa cagtgccagc agccgatagt
     1681 cgttatcgtg cttttgcagc aactgaaaaa agctgcggcg ctcgaagatt tccagctgat
     1741 agcccgcact accactggcg gaaatgcggg ctttgccgtt aagggtaaag ttgagatagt
     1801 caatatcacg caggatggtc ctgcctgaaa cgccagtctg ttgcgccagc tcaccaggcg
     1861 tgcgcggctg ttgctccagc agatcgacaa tctttaactg gcgttcgttt agcattaatc
     1921 catctgacgg aactggctaa acgcgttgac tttctccgcg gttaaggtgg tcagaaaatc
     1981 ccgtatcaac gtgagcagag catcgtaatc ggcttttgaa atcataccgc tgttagcgtg
     2041 cagatagcgg gttggcaggc acagcgcaac aaccggacgc ccgccgccca tcacgttgta
     2101 gcgcccgcca tccgtcgcac cggttttcat ggtggaaaat tgcagcggta aatcgttatg
     2161 tgcggcacag ctttttaacg ctgctaccag tttctggttg gggaagtagc gcttgtcaaa
     2221 cagcatcagc cccggcccct ggcccagttt cagcgggtat ttaatgttat caatgcccgg
     2281 aacatcgcct gcgacagcgg tatccagcac gatcactaca tccggtttaa tgtgttccgc
     2341 cgaggtttgt gccccgcgta gcccaacttc ttcttccacg ctgccgacgc catacagcgt
     2401 aatttcggga ttattcaccg tctgcaatag ttcagccatc attgcgcagc cgatgcggtt
     2461 atccagcgcc ttgccgacca ctttatcttc gccccagcag gcaaaattgg cttccgggct
     2521 aataaaatcg cccatcgcca caccgcgttt ttccacctca tcgcgactgt ttgcgccaat
     2581 atcaatgaac atctcatcaa atgacagcgg ccgttgcctt tgcttttccg ttaacgcatg
     2641 aggcgcgacg gaaccaatca caccagggat tttcactccc ttgtgtgtgc gtatggttac
     2701 ccggtggttg agcatcgact gattccacca gccaccaatg gtggtgaaac gcagaaaacc
     2761 gctctcgtcg atgtgggtga ccataaagcc gacttcatcc atatgcccga caacggcaac
     2821 ttttggacct ttattcccct tacgggcaac aaagctgccc agaccatcaa aggtgatctc
     2881 attaacgcaa ggttccagcg tgtttatcag aatgtcgcga acttcctgtt catcgccgct
     2941 gacggcgctg gcttcgcaca actgttgcag taactcaatg ttcatggaca agctcctgtt
     3001 gcgcggcttt cgctttgcgg cgtaaccaca atcctttcag gacgataatg aatgaaatgt
     3061 tcagcgcgag gccaatcgcc agcaccagat aaaacgaacc caccggcgac atcaggccga
     3121 tcagcgggtc aaagataccc aaaccaggtg ccagacgttt gattccgaaa gcgatcacca
     3181 gcacgccggt aatgccaccc gccagcgtat tggcggtaat catcggcaac ggagctgcca
     3241 gagcgtaagg tatagccggt tcggttgcga ctgtggcacc gaccacaatg gcactactgg
     3301 cagcctcttt ttcctgtcgg gtaaacagtt tgggcgcaat gaacgtcgca agacccgccg
     3361 caacgggcgg catcaacgcg acaacgccga cgatggcgta ccagtcataa atgtgttttt
     3421 ccagcagtga gaagcagaag aaccaggcgg ttttattgat ggggccgccc atatcgaacg
     3481 ccagcatcgc accgaccaga aacgctgctg caaacttcat tgatggagga atggtattca
     3541 ggaagtggag cagcccgccc atgaggtcgg acatcaccgg cccgataacg tagtaagtga
     3601 gcacgccgaa aaccagcaga gtaacgaacg ggatcagcat tgaaccgagc agcggttgta
     3661 atgctttgcc aaggcgcact ttgcggaacc agaagacgaa atagccaatc gccagcccca
     3721 gcaccaccgc gccgaggaat cccgcacccg actgggtgcc gagcagcgct ttgtcgttcg
     3781 ccagatagca aaccagaaac gccggagcga aagccggttt atcggcaatc gacgaggcaa
     3841 tataagcgcc catgatgggg atcataaagg tgaagccaag gtaaccgatg gattcaacta
     3901 cccaggtaaa cgacggcgcg cctttcgaca tatcggtata cggcaaaccg aactgcacca
     3961 gcatgttggc aagcgccacc aggataccac cgccgatgac aaacggcagc gccgcagaga
     4021 cgctcgccat caggtggctc atcacgctgc cgctttgcat ttcctgtttg ccaagcttca
     4081 cgccactatc tgcggcaaaa agctgcgagt ttgtcggtaa ttcgctgaaa atctggtcga
     4141 tatttttcaa cgcctgggag atggcaatct cataaacttt cttcccggta aaccgcgcgc
     4201 gatcatcacc gctcaggcca cgcccggtag cgagaatgac gtaatcggca gcggcaatct
     4261 cttcgctgga taagcggttt tcaacgccac tggacccttg agtttccact tttatggtat
     4321 ggccgagaga acgggctttc tgttccaggg cttccgccac catgtaggtg tgagcgatcc
     4381 cggcggggca gttggtgatc gcgacaatac gtaaggatga ctccatcgcc acttccttat
     4441 gagctgaggg tttgatttaa caaggcaagc acttggtcgg tatcgccctg ttgcagttga
     4501 tgaataaatt ccttgtgaat aattttgcga cacagtgtgc cgatgatttt gacctgatcc
     4561 tcttcgccgc tttgcggcac gccgaggcag atccagcaat tgacgtcttc gccatcgctg
     4621 gctttccagt caatagcctg cgctttgcgg gcgaataata cgaacggttg tttaacgcag
     4681 gcgcttttac cgtgcggcac ggcgacaccg gaaccaaatc cagtagagtg cattttttcg
     4741 cgcagcagca gggtttgcag gaactggtgt gagtcggtga taaaaccgtt ttgtaacgct
     4801 attgtcgcca actgcttcag aacggaataa gcgccattgc cctgaatatt caggtcaata
     4861 cagcttgcag taagagctgc cattaatcgg actccataaa atatatttta atcaattgta
     4921 atggtggagc gattaagtga tgagaggcga tatgtcggta aacaatgaca atttgagaca
     4981 gagtgaaagg tcagatttgc ggagtaatgc acataatggt tatttaaata aaccacatga
     5041 atcattaatg ggttattcat tatttttgtg atttactcac aatgtatcag ggaaatataa
     5101 cttaccggga gatgtaatat gtttaatttt tcaaatcgaa atttaaaata ttgtgccgga
     5161 ggcatctccg gcacattggg caattacggc aggtaaaaca cttcttgc
//
LOCUS       DADMJE010000214         4965 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.217, whole genome shotgun sequence.
ACCESSION   DADMJE010000214 DADMJE010000000
VERSION     DADMJE010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4965
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.217"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            392..1366
                     /gene="hemB"
                     /locus_tag="JN001_003831"
     CDS             392..1366
                     /gene="hemB"
                     /locus_tag="JN001_003831"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HAY9054889.1"
                     /translation="MTDLIQRPRRLRKSPALRAMFEETTLSLNDLVLPIFVEEEIDDY
                     KAVEAMPGVMRIPEKHLAREIERIANAGIRSVMTFGISHHTDETGSDAWREDGLVARM
                     SRICKQTVPEMIVMSDTCFCEYTSHGHCGVLCEHGVDNDATLENLGKQAVVAAAAGAD
                     FIAPSAAMDGQVQAIRQALDAAGFKDTAIMSYSTKFASSFYGPFREAAGSALKGDRKS
                     YQMNPMNRREAIRESLLDEAQGADCLMVKPAGAYLDIVRELRERTELPIGAYQVSGEY
                     AMIKFAALAGAIDEEKVVLESLGSIKRAGADLIFSYFALDLAEKKILR"
     gene            complement(1472..2323)
                     /gene="tauD"
                     /locus_tag="JN001_003832"
     CDS             complement(1472..2323)
                     /gene="tauD"
                     /locus_tag="JN001_003832"
                     /EC_number="1.14.11.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine dioxygenase"
                     /protein_id="HAY9054890.1"
                     /translation="MSERLSITPLGPYIGAQISGADLTRPLSDNQFEQLYHAVLRHQV
                     VFLRDQAITPQQQRALAQRFGELHIHPVYPHAEGVDEIIVLDTHNDNPPDNDNWHTDV
                     TFIETPPAGAILAAKELPSTGGDTLWTSGITAYEALSVPFRQLLSGLRAEHDFRKSFP
                     EYKYRKTEEEHQRWREAVAKNPPLLHPVVRTHPVSGKQALFVNEGFTTRIVDVSEKES
                     EALLGFLFAHITKPEFQVRWRWQPNDIAIWDNCVTQHYANADYLPQRRIMHRVTILGD
                     KPFYRAG"
     gene            complement(2338..3147)
                     /gene="tauC"
                     /locus_tag="JN001_003833"
     CDS             complement(2338..3147)
                     /gene="tauC"
                     /locus_tag="JN001_003833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter permease TauC"
                     /protein_id="HAY9054891.1"
                     /translation="MSVLINEKLHSRRLKWRWPLSRQVTLSIGTLAVLLTVWWTVAAL
                     QLISPLFLPPPQQVLAKLLTIAGPQGFMDATLWQHLAASLTRIVLALLAAVVIGIPVG
                     IAMGLSPTVRGILDPVIELYRPVSPLAYLPLMVIWFGIGETSKILLIYLAIFAPVAMS
                     ALAGVKSAQQVRIRAAQSLGASRAQVLWFVILPGALPEILTGLRIGLGVGWSTLVAAE
                     LIAATRGLGFMVQSAGEFLATDVVLAGIAVIAIIAFLLELGLRALQRRLTP"
     gene            complement(3144..3911)
                     /gene="tauB"
                     /locus_tag="JN001_003834"
     CDS             complement(3144..3911)
                     /gene="tauB"
                     /locus_tag="JN001_003834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter ATP-binding subunit"
                     /protein_id="HAY9054892.1"
                     /translation="MLQISHLYADYGGKPALEDINLTLESGELLVVLGPSGCGKTTLL
                     NLIAGFVPYQHGSIQLAGKRIEGPGAERGVVFQNEGLLPWRNVQDNVAFGLQLAGIEK
                     MQRLEIAHQVLKKVGLEGAEKRYIWQLSGGQRQRVGIARALAANPQLLLLDEPFGALD
                     AFTRDQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSSGPGRVLERLSLNFA
                     RRFVAGESSRSIKSDPQFIAMREYVLSRVFEQREAFS"
     gene            complement(3924..4886)
                     /gene="tauA"
                     /locus_tag="JN001_003835"
     CDS             complement(3924..4886)
                     /gene="tauA"
                     /locus_tag="JN001_003835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414899.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="taurine ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9054893.1"
                     /translation="MAISSRNTLLAALAFIAFQAQAVNVTVAYQTSAEPAKVAQAGNT
                     FAKESGASVDWRKFDSGASIVRALASGDVQIGNLGSSPLAVAASQQVPIEVFLLASKL
                     GNSEALVVKKTISKPEDLIGKRIAVPFISTTHYSLLAALKHWGIKLGQVEIVNLQPPA
                     IIAAWQRGDIDGAYVWAPAVNALEKDGKVLTDSEQVGQWGAPTLDVWVVRKDFAEKHP
                     EVVKAFAKSAIDAQQPYIANPDAWLKQPENISKLARLSGVPEGDVPGLVKGNTYLTPQ
                     QQTAELTGPVNKVIIDTAQFLKEQGKVPAVANDYSQYVTSRFVQ"
BASE COUNT         1185 a         1417 c         1244 g         1119 t
ORIGIN      
        1 tggacatata taatttatgg agaaaaacac gcatcaaatt gataaaagga cgatatttca
       61 acatgttgca gataatgtta tttttgatac atacgcgtta taaatatcaa aaacacaaac
      121 cagataaata tcttatcaat atacaacaaa gtttgaatta ttcaatttat agcagcacaa
      181 ccaaacgcaa aaaaaaaaat aataaccaag agctataaat aaagattaaa aatattttca
      241 gtgaatatga acttattgct atttctatta caaagatgtc ctggtctctc tttcattctc
      301 ttcttgtcaa catcacgaca actttcgtaa aacactcctg ccccgcttca ggtatactgt
      361 gcaccttaat tccacaaaca tcaggcagac catgacagac ttaatccaac gccctcgtcg
      421 cctgcgcaaa tctcctgcgc tgcgcgctat gtttgaagag acaacactta gccttaacga
      481 cctggtgttg ccgatctttg ttgaagaaga aattgacgac tacaaagccg ttgaagccat
      541 gccaggcgtg atgcgcattc cagagaaaca tctggcacgc gaaattgaac gcatcgccaa
      601 cgccggtatt cgttccgtga tgactttcgg catctctcac cataccgatg aaaccggcag
      661 cgacgcctgg cgggaagatg gactggtggc gcgtatgtcg cgcatctgca agcagactgt
      721 gccagaaatg atcgtcatgt cagacacttg tttctgtgaa tacacttctc acggtcactg
      781 cggtgtgctg tgcgagcatg gcgtcgacaa cgacgcgact ctggaaaatt taggcaagca
      841 agccgtggtt gcagctgctg caggcgcaga cttcatcgcc ccttccgccg cgatggacgg
      901 ccaggtacag gcgattcgtc aggcgctgga cgctgcaggc tttaaagata cggcgattat
      961 gtcgtattcg accaagttcg cctcttcctt ttatggcccg ttccgtgaag ctgccggaag
     1021 cgcattaaaa ggcgaccgca aaagctatca gatgaaccct atgaaccgtc gcgaggcgat
     1081 tcgtgagtca ctgctggatg aagcccaggg cgcagactgc ctgatggtta aacctgctgg
     1141 agcgtacctc gacatcgtgc gtgagctgcg tgaacgtact gaattgccga ttggcgcgta
     1201 tcaggtgagc ggtgagtacg cgatgattaa gttcgccgcg ctggcgggtg ctatagatga
     1261 agagaaagtc gtgctcgaaa gcttaggttc aattaagcgt gcgggtgcgg atctgatttt
     1321 cagctacttt gcgctggatt tggctgagaa gaagattctg cgttaatttt tttcctctca
     1381 gaaaggggga gttaacctgt tgaaagtacg gtgaacgccc cctcacccta accctctccc
     1441 caagggggcg agggaaccgt ccgcactcgt atcaccccgc ccgataaaac ggtttatccc
     1501 caagaatcgt cacccgatgc ataatccgcc gctgtggcag gtaatcggca ttggcatagt
     1561 gctgagtcac gcagttatcc caaatcgcaa tatcattcgg ttgccagcgc caacgcacct
     1621 gaaactccgg tttagtgata tgggcgaata aaaagcctaa caaggcttcg ctctctttct
     1681 cgctgacatc gacaattcgc gtagtaaagc cttcattcac aaacagcgcc tgtttaccgc
     1741 tcaccggatg cgttcgcacc accggatgta gcaacggagg atttttcgcg accgcctcgc
     1801 gccagcgttg atgttcctcc tcggttttgc ggtatttgta ttccgggaac gatttacgga
     1861 aatcatgctc cgcacgcagc ccgctcagca gctggcggaa gggaacagag agcgcctcat
     1921 aggccgtaat accgctggtc cagagcgtat caccgccggt cgaaggtaat tctttagctg
     1981 ccagaatcgc ccctgcgggt ggcgtttcaa taaatgtcac atcggtatgc cagttgtcgt
     2041 tatctggcgg attatcgtta tgggtatcca gcacgatgat ctcgtcaacc ccttcggcat
     2101 gagggtaaac agggtgaata tgcagttcgc caaaacgctg ggccagcgcg cgttgctgct
     2161 gcggcgtaat ggcttgatcg cgcagaaaca ccacctgatg gcgcagcacc gcatggtaaa
     2221 gctgttcaaa ctgattatcg cttaacgggc gcgtcaggtc ggcacccgaa atttgtgcgc
     2281 cgatatacgg ccccagcggg gtaatgctca gacgttcact cattgtactt ctccatgcta
     2341 gggcgtcaga cggcgctgta acgcgcgcaa acccagttct aaaagaaagg cgataatcgc
     2401 aatcaccgcg attcccgcca gcaccacgtc agtcgcgaga aattcacccg ctgactgaac
     2461 cataaatcct aaaccgcgcg tcgcggcaat cagctccgcc gctaccagcg tagaccagcc
     2521 cacacccaga ccaatgcgta atccggtgag gatttccggc agcgcgccgg gcaaaatgac
     2581 aaaccacagc acctgcgcac ggctggcacc cagcgactgg gcggcacgaa tgcgaacctg
     2641 ctgcgcgctt ttcacccccg ccagcgccga catcgccacc ggtgcaaaaa tcgctaaata
     2701 gatcagtaag atcttcgagg tttcaccaat accaaaccag atcaccatca gcggcaaata
     2761 agccagcggc gacaccggac gataaagttc gattaccgga tccagaatgc cgcgcaccgt
     2821 cgggcttagc cccatggcga tcccgaccgg aataccgatc accaccgccg cgagtagcgc
     2881 cagcacaatg cgcgtcaggc tggctgccag atgctgccac agcgtggcgt ccataaatcc
     2941 ctgcggtccg gcaatggtga gcagttttgc cagtacttgt tgcggcggcg gcaaaaacag
     3001 cgggctaatc agttgcagcg ccgccaccgt ccaccataca gtgagtaaaa ccgctaacgt
     3061 gccaatgctt aaggtcacct gacgcgagag cggccagcgc catttcagcc gccgcgaatg
     3121 cagtttttca ttaatgagca cactcatgag aacgcctccc gttgctcaaa tacgcggctt
     3181 aaaacatatt cgcgcatggc gatgaattgt ggatcggact tgatgctgcg gctcgactct
     3241 cccgcaacaa agcggcgagc aaagttgagc gacagccgct ccagcacacg gccagggccg
     3301 gatgaaagca gaaccagttc agtcgccata aacaccgctt cttctatatc gtgggtaatc
     3361 aacagcacct gcttgcccgt ctcctgccag agtttcagca gcagagtttg catctggtcg
     3421 cgggtgaagg cgtccagcgc accaaacggt tcgtcgagta ataacagctg gggattcgcc
     3481 gccagcgcgc gggcaatccc cacccgctga cgttgaccac cggaaagctg ccagatatag
     3541 cgtttttctg cgccttccag ccccactttt ttcagcacct ggtgcgcgat ttccagtcgc
     3601 tgcattttct ctatacctgc caattgcagg ccgaacgcca cgttgtcctg tacattgcgc
     3661 cacggtagca gcccttcatt ctgaaaaacc accccgcgct ctgctcccgg tccctcaata
     3721 cgcttacccg ccagttgaat gctgccatgc tgataaggca caaaaccggc aatcagattc
     3781 agcaacgtgg ttttaccgca gccggacggc cccagcacca ccagtagctc gccgctttcc
     3841 agcgtcaggt tgatatcttc cagtgccggt ttgccgccat aatcggcata gagatgagag
     3901 atttgcagca tctgcgcctc cttttattgc acgaagcgcg aggtaacgta ctggctgtaa
     3961 tcattcgcta cagccgggac cttgccctgc tctttcaaaa actgcgcggt gtcgatgatt
     4021 actttgttca ccggtccggt cagttctgcc gtttgttgct gcggcgtcag ataggtattc
     4081 cccttaacca gccccggaac gtcaccttcc ggcacgccgc ttaaacgcgc cagtttgctg
     4141 atgttttccg gctgtttcag ccacgcgtct gggttagcaa tgtacggttg ctgagcatcg
     4201 atggcgcttt tagcgaacgc tttcacgacc tcaggatgtt tctcggcaaa atctttgcgc
     4261 accacccaga cgtccagcgt tggcgcaccc cactgcccga cctgttcaga atcggtcaac
     4321 accttgccgt ctttttccag ggcgttaacc gccggtgccc agacataagc accatcaata
     4381 tcaccccgct gccatgcggc gataatcgcg ggcggctgca ggttcacaat ctccacttgc
     4441 cctagtttaa tcccccagtg tttcagcgcc gccagcaggc tgtagtgggt ggtggagata
     4501 aacggtacgg caatgcgttt gccaatcaaa tcttcgggtt tgctgatagt tttctttacc
     4561 accagcgctt cggagttacc cagttttgac gccagcaaga agacttcaat cggcacctgt
     4621 tggctggctg caaccgctaa tgggctggaa ccgaggttgc cgatttgcac gtcgccagaa
     4681 gccagcgccc gcacgatgct ggctccgctg tcaaacttac gccagtccac gctcgccccg
     4741 ctctctttag caaaggtgtt gccggcctga gccactttcg ccggttcggc tgaggtttga
     4801 tacgccacgg tgacgttcac cgcctgtgcc tgaaaagcga tgaatgccag tgcggcaaga
     4861 agtgtgttac gcgatgaaat tgccatgatt gtctgctccc cagtcttgtt atgggagcag
     4921 tattcaggaa taaaaacatt cattaaaaga attagtcgtt atcgc
//
LOCUS       DADMJE010000215         4960 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.218, whole genome shotgun sequence.
ACCESSION   DADMJE010000215 DADMJE010000000
VERSION     DADMJE010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4960
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.218"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..247)
                     /locus_tag="JN001_003836"
     CDS             complement(<1..247)
                     /locus_tag="JN001_003836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3029 family protein"
                     /protein_id="HAY9054894.1"
                     /translation="MPTSHENALQQRCQQIVTSPVLSPEQKRHFLALEAENNLPYPQL
                     PAEARRALDEGVICDMFEGHAPYKPRYVLPDYARFLAN"
     gene            505..1284
                     /gene="deoC"
                     /locus_tag="JN001_003837"
     CDS             505..1284
                     /gene="deoC"
                     /locus_tag="JN001_003837"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005097947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HAY9054895.1"
                     /translation="MTDLKASSLRALKLMDLTTLNDDDTDEKVIALCHQTKTPVGNTA
                     AICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIEIALAETRAAIAYGADEVD
                     VVFPYRALMAGNEQVGFDLVKACKEACAAANVLLKVIIETGELKDEALIRKASEISIK
                     AGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFKPAGGVRTAEDAQKYLAI
                     ADELFGADWADARHYRFGASSLLASLLKALGHGDGKSASSY"
     gene            1411..2733
                     /gene="deoA"
                     /locus_tag="JN001_003838"
     CDS             1411..2733
                     /gene="deoA"
                     /locus_tag="JN001_003838"
                     /EC_number="2.4.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313368.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine phosphorylase"
                     /protein_id="HAY9054896.1"
                     /translation="MFLAQEIIRKKRDGHALSDEEIRFFINGIRDNTISEGQIAALAM
                     TIFFHDMTMPERVSLTMAMRDSGTVLDWKSLHLNGPIVDKHSTGGVGDVTSLMLGPMV
                     AACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDDNRFREIIKDVGVAIIGQTSSL
                     APADKRFYATRDITATVDSIPLITASILAKKLAEGLDALVMDVKVGSGAFMPTYELSE
                     ALAEAIVGVANGAGVRTTALLTDMNQVLASSAGNAVEVREAVQFLTGEYRNPRLFDVT
                     MALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKGPTDFVENYAKYL
                     PTAMLTKAVYADTEGFVSEMDARALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQ
                     VDGQRPLAVIHAKDENSWQEAAKAVKAAIKLADKAPESTPTVYRRISE"
     gene            2785..4008
                     /gene="deoB"
                     /locus_tag="JN001_003839"
     CDS             2785..4008
                     /gene="deoB"
                     /locus_tag="JN001_003839"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HAY9054897.1"
                     /translation="MKRAFIMVLDSFGIGATEDAERFGDVGADTLGHIAEACAKGEAD
                     NGRKGPLNLPNLTRLGLAKAHEGSTGFIPAGMDGNAEVIGAYAWAHEMSSGKDTPSGH
                     WEIAGVPVLFEWGYFSDHENSFPQELLDKLVERANLPGYLGNCHSSGTVILDQLGEEH
                     MKTGKPIFYTSADSVFQIACHEETFGLDKLYELCEIAREELTNGGYNIGRVIARPFIG
                     DKAGNFQRTGNRHDLAVEPPAPTVLQKLVDEKHGQVVSVGKIADIYANCGITKKVKAT
                     GLDALFDATIKEMKEAGDNTIVFTNFVDFDSSWGHRRDVAGYAAGLELFDRRLPELMS
                     LLRDDDILILTADHGCDPTWTGTDHTREHIPVLVYGPKVKPGSLGHRETFADIGQTLA
                     KYFGTSDMEYGKAMF"
     gene            4088..4807
                     /gene="deoD"
                     /locus_tag="JN001_003840"
     CDS             4088..4807
                     /gene="deoD"
                     /locus_tag="JN001_003840"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HAY9054898.1"
                     /translation="MATPHINAEMGDFADVVLMPGDPLRAKYIAETFLEDAREVNNVR
                     GMLGFTGTYKGRKISVMGHGMGIPSCSIYTKELITDFGVKKIIRVGSCGAVLPHVKLR
                     DVVIGMGACTDSKVNRIRFKDHDFAAIADFDMVRNAVDAAKALGIDARVGNLFSADLF
                     YSPDGEMFDVMEKYGILGVEMEAAGIYGVAAEFGAKALTICTVSDHIRTHEQTTAAER
                     QTTFNDMIKIALESVLLGDKE"
BASE COUNT         1194 a         1262 c         1364 g         1140 t
ORIGIN      
        1 cgttcgccag aaaacgggcg taatcgggta agacatagcg cggtttgtac ggcgcatgac
       61 cttcaaacat atcgcagatt acaccctcat ccagcgcgcg gcgggcttcg gcaggaagct
      121 gcggataagg cagattgttt tctgcttcca gagccagaaa atggcgcttc tgctccgggc
      181 taagcactgg gctggtgaca atttgctggc aacgttgttg cagtgcattt tcatgagaag
      241 tgggcatctt cttttccttt tatgccgaag gtgatgcgcc attgtaagaa gtttcgtgat
      301 gttcactttg atcctgatgc gtttgccacc actgacgcat tcatttgaaa gtgaattatt
      361 tgaaccagat cgcattacag tgatgcaaac ttgtaagtag attaccttaa ttgtgatgta
      421 tatcgaagtg tgttgcggag tagatgttag aatactaaca aactcgcaag gtgaatttta
      481 ttggcgacaa gccaggagaa tgaaatgact gatctgaaag caagcagcct gcgtgcactg
      541 aaattgatgg acctgaccac cctgaatgac gacgacaccg acgagaaagt aattgctctg
      601 tgtcatcaga ccaaaactcc ggtcggcaat accgccgcta tctgtatcta tcctcgcttt
      661 atcccgattg ctcgcaaaac gctgaaagag cagggcaccc cggaaatccg aatcgctacg
      721 gtaaccaact tcccacacgg taacgatgac atcgaaatcg cgctggcaga aacccgtgcg
      781 gcaatcgcct acggtgctga tgaagttgac gttgtgttcc cgtaccgcgc gctgatggcg
      841 ggtaacgagc aggttggttt tgacctggtg aaagcctgta aagaggcttg cgcggcagcg
      901 aatgtactgc tgaaagtgat catcgaaacc ggcgaactga aagacgaagc gctgatccgt
      961 aaagcgtctg aaatctccat caaagcgggt gctgacttca tcaaaacctc taccggtaaa
     1021 gtggcagtga acgcgacgcc ggaaagcgcg cgcatcatga tggaagtgat ccgtgatatg
     1081 ggcgtagaaa aaaccgttgg tttcaaaccg gcgggcggcg tgcgtactgc ggaagatgcg
     1141 cagaaatatc tcgccatcgc agatgaactg ttcggtgctg actgggcaga tgcgcgtcac
     1201 taccgctttg gtgcttccag cctgctggca agcctgttga aagcgctggg ccacggtgac
     1261 ggtaagagcg ccagcagcta ctaagcaaga tgctttacgc ctgatgcgct gcgcttatca
     1321 ggcctacgag acgtatctac ccgtaggccg gataaggcgt agacgcatcc ggcaaaagcc
     1381 gcctcatact cttttcctcg ggaggttacc ttgtttctcg cacaagaaat tattcgtaaa
     1441 aaacgtgatg gtcatgcgct gagcgatgaa gaaattcgtt tctttatcaa cggcattcgc
     1501 gacaacacta tctccgaagg gcagattgcc gccctcgcga tgaccatttt cttccacgat
     1561 atgacaatgc ctgagcgtgt ctcgctgacc atggcgatgc gagattcagg aaccgttctc
     1621 gactggaaaa gcctgcatct gaatggcccg attgttgata aacattccac cggcggcgtc
     1681 ggcgatgtca cttcgctgat gttggggccg atggtcgcag cctgcggcgg ctatattccg
     1741 atgatctccg gtcgcggcct cggtcatact ggcggtacgc tcgacaaact ggaatccatc
     1801 cctggcttcg acattttccc ggatgacaac cgtttccgcg aaattattaa agacgtcggc
     1861 gtggcgatta tcggtcagac cagctcactg gctccggcgg ataaacgttt ctacgcgacc
     1921 cgtgatatta ccgcaaccgt ggactccatc ccgctgatca ctgcctcgat cctggcgaag
     1981 aaactggcgg aaggtctgga tgcgctggtg atggacgtga aagtgggtag cggcgcgttt
     2041 atgccgacct acgaactctc tgaagccctt gccgaagcga ttgttggcgt ggctaacggc
     2101 gctggcgtgc gcaccaccgc gctgctcacc gacatgaatc aggtactggc ctccagtgca
     2161 ggtaacgcgg ttgaagttcg tgaagcggtg cagttcctga cgggtgaata tcgtaacccg
     2221 cgtctgtttg atgtcacgat ggcgctgtgc gtggagatgc tgatctccgg caaactggcg
     2281 aaagatgacg ccgaagcgcg cgcgaaattg caggcggtgc tggacaacgg taaagcggca
     2341 gaagtctttg gtcgtatggt agcggcacaa aaaggcccga ccgacttcgt tgagaactac
     2401 gcgaagtatc tgccgacagc gatgctgacg aaagcagtct atgctgatac cgaaggtttt
     2461 gtcagtgaaa tggatgcccg cgcgctgggg atggcagtgg ttgcaatggg cggcggtcgt
     2521 cgtcaggcat ctgacaccat cgattacagc gtcggcttta ctgatatggc gcgtctgggc
     2581 gaccaagtag acggtcagcg tccgctggcg gttatccacg cgaaagacga aaacagctgg
     2641 caggaagcgg cgaaagcggt gaaagcggca attaaacttg ccgataaagc accggaaagc
     2701 acaccaactg tctatcgccg tatcagcgaa taacggtata ctgatctgat catttaaatt
     2761 tgaagcactg agtacggaga acatatgaaa cgtgcattta ttatggtgct ggactcattc
     2821 ggcatcggcg ctacagaaga tgcagaacgc tttggtgacg tcggggctga caccctgggt
     2881 catatcgcag aagcttgtgc caaaggcgaa gctgataacg gtcgtaaagg cccgctcaat
     2941 ctgccaaatc tgacccgtct ggggctggcg aaagcacacg aaggttctac cggtttcatt
     3001 ccggcgggaa tggacggcaa cgctgaagtt atcggcgcgt acgcatgggc gcacgaaatg
     3061 tcatccggta aagatacccc gtctggtcac tgggaaatcg ccggtgtccc ggttctgttt
     3121 gagtggggat acttctccga tcacgaaaac agcttcccgc aagagctgct ggataaactg
     3181 gtcgaacgcg ctaatctgcc gggttacctc ggtaactgcc actcttccgg tacggtcatt
     3241 ctggatcagc tgggcgaaga gcacatgaaa accggcaagc cgattttcta tacctccgct
     3301 gactccgtgt tccagattgc ctgccacgaa gaaacctttg gcctggataa actctacgaa
     3361 ctgtgcgaaa tcgcccgtga agagctgacc aacggcggct acaacatcgg tcgtgttatc
     3421 gctcgtccgt ttatcggtga caaagccggt aacttccagc gtaccggtaa ccgtcacgac
     3481 ttggctgttg agccgccagc accgaccgtg ctgcagaaac tggttgatga aaaacacggt
     3541 caggtggttt ctgtcggtaa aattgcagac atctacgcca actgcggtat caccaagaaa
     3601 gtgaaagcaa ctggcctgga cgcgctgttt gacgccacca tcaaagagat gaaagaagcg
     3661 ggtgataaca ccatcgtctt caccaacttc gttgacttcg actcttcctg gggccaccgt
     3721 cgcgacgtcg ccggttatgc tgcgggtctg gagctgttcg accgccgtct gccggagctg
     3781 atgtctttgc tgcgcgatga cgacatcctg atcctcactg ctgaccacgg ttgtgatccg
     3841 acctggaccg gtactgacca cacgcgtgaa cacattccgg tactggttta cggcccgaaa
     3901 gtaaaaccgg gttcactggg tcaccgtgaa accttcgcgg atatcggcca gactctggca
     3961 aaatattttg gtacttctga tatggaatat ggcaaagcca tgttctgata atgggtgcgg
     4021 cttgatgccc tcaccccggc cctctcccac agggagaggg tgaaaacatg ttgataagga
     4081 taaaacaatg gctaccccac acattaatgc agaaatgggc gatttcgctg acgtagtttt
     4141 gatgccaggc gacccgctgc gtgcgaagta tattgctgaa actttccttg aagatgcccg
     4201 tgaagtgaac aacgttcgcg gtatgctggg cttcaccggt acttacaaag gccgcaaaat
     4261 ttccgtaatg ggtcacggta tgggtatccc gtcctgctcc atctacacca aagaactgat
     4321 caccgatttc ggcgtgaaga aaattatccg cgtgggttcc tgtggcgcag ttctgccgca
     4381 cgtaaaactg cgcgacgtcg ttatcggtat gggtgcctgc accgattcca aagttaaccg
     4441 catccgtttt aaagatcatg actttgccgc tatcgctgac tttgacatgg tgcgtaacgc
     4501 ggtagacgcg gctaaagcac tgggcattga tgctcgcgtt ggtaacctgt tctccgctga
     4561 cctgttctac tctccggacg gcgaaatgtt cgacgtgatg gaaaaatacg gcatcctcgg
     4621 cgtggaaatg gaagcggctg gtatctacgg cgtcgctgca gaatttggcg cgaaagccct
     4681 gaccatctgt accgtgtctg accacatccg cactcacgag cagaccactg ccgctgagcg
     4741 tcagaccacc ttcaacgaca tgatcaaaat cgcactggaa tccgttctgc tgggcgataa
     4801 agagtaattg tgtttcgctg aaaggcgatt gtcgtgtgaa gccggagtgg gagactgctc
     4861 cggcttttta gtatctattc atcaatagca actgatttat agatttacta ttatttttca
     4921 tatggataga aaataaaatc tattcaagta tctattcacg
//
LOCUS       DADMJE010000216         4852 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.219, whole genome shotgun sequence.
ACCESSION   DADMJE010000216 DADMJE010000000
VERSION     DADMJE010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4852
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.219"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1250)
                     /locus_tag="JN001_003841"
     CDS             complement(<1..1250)
                     /locus_tag="JN001_003841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid carrier protein"
                     /protein_id="HAY9054899.1"
                     /translation="MPDFFSFINSVLWGSVMIYLLFGAGCWFTFRTGFVQFRYIRQFG
                     KSLKNSIHPQPGGLTSFQSLCTSLAARVGSGNLAGVALAITAGGPRAVFWMWVAAFIG
                     MATSFAECSLAQLYKERDVNGQFRGGPAWYMARGLGMRWMGVLFAVFLLIAYGIIFSG
                     VQANAVARALSFSFDFPPLVTGIILAVFALLAITRGLHGVARLMQGFVPLMAIIWVLT
                     SMVICVINIGQLPHVIWSIFESAFGWQEAAGGAAGYTLSQAITNGFQRSMFSNEAGMG
                     STPNAAAAAASWPPHPAAQGIVQMIGIFIDTLVICTASAMLILLAGNDTTYMPLEGIQ
                     LIQKAMRVLMGSWGAEFVTLVVILFAFSSIVANYIYAENNLFFLRLNTPKAIWCLRIC
                     TFATVIGGTLLSLPLMWQLADIIMA"
     gene            1529..2482
                     /gene="tal"
                     /locus_tag="JN001_003842"
     CDS             1529..2482
                     /gene="tal"
                     /locus_tag="JN001_003842"
                     /EC_number="2.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transaldolase"
                     /protein_id="HAY9054900.1"
                     /translation="MTDKLTSLRQYTTVVADTGDIAAMKLYQPQDATTNPSLILNAAQ
                     IPEYRKLIDDAVAWAKQQSNDRAQQIVDATDKLAVNIGLEILKLVPGRISTEVDARLS
                     YDTEASIAKAKRLIKLYNDAGISNDRILIKLASTWQGIRAAEQLEKEGINCNLTLLFS
                     FAQARACAEAGVFLISPFVGRILDWYKANTDKKEYAPAEDPGVVSVSEIYQYYKEHGY
                     ETVVMGASFRNIGEILELAGCDRLTIAPTLLKELAESEGAIERKLSYTGEVKARPARI
                     TESEFLWQHNQDPMAVDKLAEGIRKFAIDQEKLEKMIGDLL"
     gene            2597..3184
                     /gene="mog"
                     /locus_tag="JN001_003843"
     CDS             2597..3184
                     /gene="mog"
                     /locus_tag="JN001_003843"
                     /EC_number="2.7.7.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin adenylyltransferase"
                     /protein_id="HAY9054901.1"
                     /translation="MNTLRIGLVSISDRASSGVYQDKGIPALEEWLTSVLTTPFELET
                     RLIPDEQAIIEQTLCELVDEMSCHLVLTTGGTGPARRDVTPDATLAVADREMPGFGEQ
                     MRQISLHFVPTAILSRQVGVIRKQALILNLPGQPKSIKETLEGVKDAAGNVVVHGIFA
                     SVPYCIQLLEGPYVETAPEVVAAFRPKSARRDVSE"
     gene            complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JN001_003844"
     CDS             complement(3219..3785)
                     /gene="satP"
                     /locus_tag="JN001_003844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate uptake transporter"
                     /protein_id="HAY9054902.1"
                     /translation="MGNTKLANPAPLGLMGFGMTTILLNLHNVGYFALDGIILAMGIF
                     YSGIAQIFAGLLEYKKGNTFGLTAFTSYGSFWLTLVAILLMPKLGLTDAPNAQFLGVY
                     LGLWGVFTLFMFFGTLKGARVLQFVFFSLTVLFALLAIGNIAGNAAIIHFAGWIGLIC
                     GASAIYLAMGEVLNEQFGRTVLPIGESH"
     gene            complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JN001_003845"
     CDS             complement(3934..4647)
                     /gene="msyB"
                     /locus_tag="JN001_003845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY9054903.1"
                     /translation="MNVNYLNDSDLDFLQHCSEEQLANFARLLTHNEKGKTRLSSVLM
                     RNELFKSMEGHPEQHRRNWQLIAGELQHFGGDSIANKLRGHGKLYRAILLDVSKRLKL
                     KADKEMSTFEIEQQLLEQFLRNTWKKMDEEHKQEFLHAFDARVNELEELLPLLMKDKL
                     LAKGVSHLLSSQLTRILRTHAAMSVLGHGLLRGAGLGGPVGAALNGVKAVSGSAYRVT
                     IPAVLQIACLRRMVSATQV"
     gene            complement(4673..>4852)
                     /locus_tag="JN001_003846"
     CDS             complement(4673..>4852)
                     /locus_tag="JN001_003846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2541 family protein"
                     /protein_id="HAY9054904.1"
                     /translation="ARSASQSLNIPSEIKEGQTTDWININSDNDNKRCVSKITFSGHT
                     VNSSDMATLKIIGDD"
BASE COUNT         1275 a         1250 c         1228 g         1099 t
ORIGIN      
        1 gccattatga tatctgccag ttgccacatc agcggaaggc ttagcaaggt gccgccgatg
       61 accgttgcga aggtgcagat ccgcaaacac cagatcgctt taggggtgtt caggcgtaaa
      121 aagaagagat tgttttcggc ataaatgtag ttggcaacga tggagctgaa ggcaaacaga
      181 ataaccacga gggtaacaaa ctcagcaccc caggaaccca ttagcacccg catcgccttc
      241 tggataagct gaataccttc cagcggcatg taggttgtgt cgttacccgc cagtaatatc
      301 agcatggcgc ttgccgtaca gatgaccagg gtgtcgataa aaatgccaat catctggaca
      361 atcccttgcg ctgccggatg cggaggccag gacgccgctg ccgctgccgc gtttggcgtc
      421 gaacccattc ccgcctcatt ggaaaacata ctgcgctgaa aaccgttagt aatcgcctgg
      481 cttaaggtat atcccgccgc gccgcctgcc gcttcctgcc agccaaaagc actctcaaaa
      541 atagaccaaa tgacgtgggg aagttgcccg atatttatta cgcaaatcac catgctggtc
      601 agcacccaga ttatcgccat caacgggaca aacccctgca tgagccgggc gacgccatga
      661 agaccgcgag tgattgccag cagagcaaag acagcgagaa taatgcctgt caccagcggg
      721 ggaaaatcaa aagaaaaact cagggctcgg gcaacggcgt tcgcctgaac tccgctgaaa
      781 attatgccgt aggcgatgag caaaaagacg gcgaacagaa cgcccatcca acgcatcccc
      841 agcccgcgcg ccatatacca tgccggtccg ccacgaaact gcccattgac gtcacgttct
      901 ttataaagtt gtgcaaggga acattcggca aacgaggtcg ccatgccgat aaacgcggca
      961 acccacatcc aaaagacggc tctaggtcca ccggcggtaa tagccagcgc aacgccggcc
     1021 aggttgccgc tacccacgcg cgccgcaaga ctggtacaca atgactgaaa tgaggttaaa
     1081 ccgcctggct gtggatgaat gctattttta agacttttgc caaactggcg gatgtagcga
     1141 aactgcacaa atccggtgcg aaaagtgaac caacaacctg cgccgaagag caggtaaatc
     1201 attaccgatc cccaaaggac gctgttaata aaggagaaaa aatctggcat gcatatccct
     1261 cttattgccg gtcgcgatga ctttcctgtg taaacgttac caattgttta agaagtatat
     1321 acgctacgag gtacttgata acttctgcgt agcatacatg aggttttgta taaaaatggc
     1381 gggcgatatc aacgcagtgt cagaaatccg aaacagtctc gcctggcgat aaccgtcttg
     1441 tcggcggttg cgctgacgtt gcgtcgtgat atcatcaggg cagaccggtt acatccccct
     1501 aacaagctgt ttaaagagaa atactatcat gacggacaaa ttgacctccc ttcgtcagta
     1561 caccaccgta gtggccgaca ctggggacat cgcggcaatg aagctgtatc aaccgcagga
     1621 tgccacaacc aacccttctc tcattcttaa cgcagcgcag attccggaat accgtaagtt
     1681 gattgatgat gctgtcgcct gggcgaaaca gcagagcaac gatcgcgcgc agcagatcgt
     1741 ggacgcgacc gacaaactgg cagtaaatat tggtctggaa atcctgaaac tggttccggg
     1801 tcgtatctca actgaagttg atgcgcgtct ttcctatgac accgaagcgt caattgcgaa
     1861 agcaaaacgc ctgatcaaac tctacaacga tgctggtatt agcaacgatc gtattctgat
     1921 caaactggct tctacctggc agggtatccg tgctgcagaa cagctggaaa aagaaggcat
     1981 caactgtaac ctgaccctgc tgttctcctt cgctcaggct cgtgcttgtg cggaagcagg
     2041 cgtgttcctg atctcgccat ttgttggccg tattcttgac tggtacaaag cgaatactga
     2101 taagaaagag tacgctccgg cagaagatcc gggcgtggtt tctgtatctg aaatctacca
     2161 gtactacaaa gagcacggtt atgaaaccgt ggttatgggc gcaagcttcc gtaacatcgg
     2221 cgaaattctg gaacttgcag gctgcgaccg tcttaccatc gcacctacac tgctgaaaga
     2281 gctggctgag agcgaagggg ctatcgaacg taaactgtct tacaccggcg aagtgaaagc
     2341 gcgtccggcg cgtatcactg agtccgagtt cctgtggcag cacaaccagg atccaatggc
     2401 agtagataaa ctggcggaag gtatccgtaa gtttgctatt gaccaggaaa aactggaaaa
     2461 aatgatcggc gatctgctgt aatcattctt agcgtgaccg ggaagtcggt cacgctacct
     2521 cttctgaagc ctgtctgtca ctcccttcgc agtgtatcat tctgtttaac gagactgttt
     2581 aaacggaaaa atcttgatga atactttacg tattggctta gtttccatct ctgatcgcgc
     2641 atccagcggc gtttatcagg ataaaggcat ccctgcgctg gaagaatggc tgacatcggt
     2701 gctaaccacg ccgtttgaac tggaaacccg cttaatcccc gatgagcagg cgatcatcga
     2761 gcaaacgttg tgtgagctag tggatgaaat gagttgccat ctggtgctca ccacgggcgg
     2821 aactggcccg gcgcgtcgtg acgtaacgcc cgatgcgacg ctggcagtag cggaccgcga
     2881 gatgcctggc tttggtgaac agatgcgcca gataagcctg cattttgtac caactgcgat
     2941 cctttcgcgt caggttggtg tgattcgcaa acaggcgctg atccttaact tacccggtca
     3001 gccgaagtct attaaagaga cgctggaagg tgtgaaggac gctgcgggta acgttgtggt
     3061 acacggtatt tttgccagcg taccgtactg cattcagttg ctggaagggc catacgttga
     3121 aacggcacca gaagtggttg ctgcattcag accgaagagt gcaagacgcg acgttagcga
     3181 ataaaaaaat ccccccgagc ggggggatct caaaacaatt agtgggattc accaatcggc
     3241 agaacggtgc gaccaaactg ctcgttcagt acttcaccca tcgccagata gattgcactg
     3301 gcaccacaga tcagaccaat ccagccggca aagtggatga ttgcggcgtt accggcaatg
     3361 ttaccgatcg ccagcagggc aaacagcaca gtcaggctaa agaaaacgaa ttgcagaacg
     3421 cgtgcgcctt tcagcgtgcc gaagaacata aacagcgtaa atacgcccca cagacccagg
     3481 tagacaccaa ggaactgtgc atttggcgca tcggtcagac ccagtttcgg catcagcaga
     3541 atcgcaacca gcgtcagcca gaaagaaccg taagaggtga atgcggttaa accgaaagtg
     3601 ttgccttttt tgtactccag cagaccagca aaaatttgcg cgatgccgct gtagaaaatg
     3661 cccatggcaa gaataatacc gtccagagcg aaataaccca cgttgtgcag gttaagcaga
     3721 atggtggtca tgccgaagcc catcaggccc agcggtgccg gattagccaa cttagtgttg
     3781 cccataattc ctcaaaaatc atcatcgaat gaatggtgaa ataatttccc tgaataactg
     3841 tagtgttttc agggcgcggc ataataatca gccagtgggg cagtgtctac gatcttttga
     3901 ggggaaaatg aaaattttcc ccggtttccg gtatcagacc tgagtggcgc taaccatccg
     3961 gcgcaggcag gcgatttgca gtacggctgg aatcgtcacg cgataggcgc tgccgctgac
     4021 cgctttaacc ccatttagtg ccgcacctac agggcctccc agccccgcgc cgcgcagcaa
     4081 accatgccca agtacgctca ttgctgcgtg ggtgcgtaaa atgcgggtca gttggctgga
     4141 aagcaaatgc gacacgcctt ttgccaataa tttgtctttc atcagcagcg gcagcagctc
     4201 ttccagctca ttcaccctcg catcgaacgc gtgcagaaac tcctgcttat gttcctcgtc
     4261 cattttcttc caggtattac gcagaaattg ttccagtaac tgttgctcaa tttcaaacgt
     4321 agacatctct ttgtcggctt tcagcttcaa tcgttttgaa acatcgagca aaatggcccg
     4381 atacaattta ccgtgtccgc gcagtttgtt ggcgatacta tcgccaccaa aatgctgtaa
     4441 ttctccagca atcagctgcc agttgcggcg atgttgctcg ggatgccctt ccatcgattt
     4501 aaacagttcg ttgcgcatca gtacgctgga gaggcgagtt ttgccttttt cattatgggt
     4561 gagcaatcgg gcgaaatttg ccaactgttc ctcactacaa tgctgaagaa aatccagatc
     4621 tgaatcattc aggtaattaa cattcatttt ttgtggcttc tatattctgg cgttagtcgt
     4681 cgccgataat tttcagcgtg gccatatccg atgagttcac cgtatgaccg gaaaaggtga
     4741 tttttgagac gcagcgttta ttgtcgttat cactgttaat gttgatccag tcagtggttt
     4801 gcccttcttt tatttctgaa ggaatattca gactctgact ggcgctacgg gc
//
LOCUS       DADMJE010000217         4673 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.220, whole genome shotgun sequence.
ACCESSION   DADMJE010000217 DADMJE010000000
VERSION     DADMJE010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4673)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4673)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4673
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.220"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            60..1859
                     /gene="cysJ"
                     /locus_tag="JN001_003847"
     CDS             60..1859
                     /gene="cysJ"
                     /locus_tag="JN001_003847"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent assimilatory sulfite reductase
                     flavoprotein subunit"
                     /protein_id="HAY9054905.1"
                     /translation="MTTQVPPSALLPLNPEQLARLQAATTDLTPTQLAWVSGYFWGVL
                     NQQPAALAATPAPAAEMPGITIISASQTGNARRVAEALRDDLLAAKLNVKLVNAGDYK
                     FKQIASEKLLIVVTSTQGEGEPPEEAVALHKFLFSKKAPKLENTAFAVFSLGDSSYEF
                     FCQSGKDFDSKLAELGGERLLDRVDADVEYQAAASEWRARVVDALKSRAPVAAPSQSV
                     ATGAVNEIHTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDAL
                     GVWYQNDPALVKELVELLWLKGDEPVTVEGKTLPLNEALQWHFELTVNTANIVENYAT
                     LTRSETLLPLVGDKAKLQHYAATTPIVDMVRFSPAQLDAEALINLLRPLTPRLYSIAS
                     SQAEVENEVHVTVGVVRYDVEGRARAGGASSFLADRVEEEGEVRVFIEHNDNFRLPAN
                     PETPVIMIGPGTGIAPFRAFMQQRAADEAPGKNWLFFGNPHFTEDFLYQVEWQRYVKD
                     GVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDANRMAKDVEQAL
                     LEVIAEFGGMDIEAADEFLSELRVERRYQRDVY"
     gene            1859..3571
                     /gene="cysI"
                     /locus_tag="JN001_003848"
     CDS             1859..3571
                     /gene="cysI"
                     /locus_tag="JN001_003848"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001290736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="assimilatory sulfite reductase (NADPH)
                     hemoprotein subunit"
                     /protein_id="HAY9054906.1"
                     /translation="MSEKHPGPLVVEGKLTDAERMKLESNYLRGTIAEDLNDGLTGGF
                     KGDNFLLIRFHGMYQQDDRDIRAERAEQKLEPHHAMLLRCRLPGGVITTKQWQAIDKF
                     AGENTIYGSIRLTNRQTFQFHGILKKNVKPVHQMLHSVGLDALATANDMNRNVLCTSN
                     PYESQLHAEAYEWAKKISEHLLPRTRAYAEIWLDQEKVATTDEEPILGQTYLPRKFKT
                     TVVIPPQNDIDLHANDMNFVAIAENGKLVGFNLLVGGGLSIEHGNKKTYARTASEFGY
                     LPLEHTLAVAEAVVTTQRDWGNRTDRKNAKTKYTLERVGVETFKAEVERRAGIKFEPI
                     RPYEFTGRGDRIGWVKGIDDNWHLTLFIENGRILDYPGRPLKTGLLEIAKIHKGDFRI
                     TANQNLIIAGVPESEKAKIEKIAKESGLMNAVTPQRENSMACVSFPTCPLAMAEAERF
                     LPSFIDNIDNLMAKHGVSDEHIVMRVTGCPNGCGRAMLAEVGLVGKAPGRYNLHLGGN
                     RIGTRIPRMYKENITEPEILASLDELIGRWAKEREAGEGFGDFTVRAGIIRPVLDPAR
                     DLWD"
     gene            3646..4380
                     /gene="cysH"
                     /locus_tag="JN001_003849"
     CDS             3646..4380
                     /gene="cysH"
                     /locus_tag="JN001_003849"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenosine phosphosulfate reductase"
                     /protein_id="HAY9054907.1"
                     /translation="MSKLDLNALNELPKVDRILALAETNAELEKLDAEGRVAWALDNL
                     PGEYVLSSSFGIQAAVSLHLVNQIRPDIPVILTDTGYLFPETYRFIDELTDKLKLNLK
                     VYRATESAAWQEARYGKLWEQGVEGIEKYNDINKVEPMNRALKELNAQTWFAGLRREQ
                     SGSRANLPVLAIQRGVFKVLPIIDWDNRTIYQYLQKHGLKYHPLWDEGYLSVGDTHTT
                     RKWEPGMSEEETRFFGLKRECGLHEG"
BASE COUNT         1153 a         1217 c         1334 g          969 t
ORIGIN      
        1 tgttttatgg gcgctgacag ggcgcagaaa cagctttgct tactggaaca taacgacgca
       61 tgacgacaca ggtcccacct tccgcgttgc ttccgttgaa cccggagcaa ctggcacgcc
      121 ttcaggcggc cacgaccgat ttaacgccta cccagcttgc ctgggtttct ggctatttct
      181 ggggcgtact caatcagcag cctgctgcgc ttgcagcgac gccagcgcca gccgcagaaa
      241 tgccgggtat aactattatc tccgcctcgc aaaccggcaa tgcgcgccgg gttgctgaag
      301 cattacgcga tgatttatta gcagcaaaac tgaacgttaa gctggtgaac gcgggcgact
      361 ataaattcaa acaaatcgcc agcgaaaaac tgctcatcgt agtgacgtca acgcaagggg
      421 aaggggaacc gccggaagaa gccgtcgcgc tgcataagtt cctgttctcc aaaaaagcgc
      481 caaagctgga aaacaccgcg tttgccgtgt ttagcctcgg cgatagctct tatgaatttt
      541 tctgccagtc cgggaaagat ttcgacagca agctggcgga actgggtggt gaacgcctgc
      601 tcgaccgtgt cgatgccgat gttgaatacc aggctgctgc cagcgagtgg cgcgcccgcg
      661 tggttgatgc gcttaaatcg cgtgcgcctg tcgcggcacc ttcgcaatcc gtcgctactg
      721 gcgcggtaaa tgaaatccac accagcccgt acagcaaaga cgcgccgctg gtggctagcc
      781 tctctgttaa ccagaaaatt accgggcgta actctgaaaa agacgttcgc catatcgaaa
      841 ttgacttagg tgactcgggc ctgcgttacc agccgggtga cgcgctgggc gtctggtatc
      901 agaacgatcc ggcactggtg aaagaacttg tcgaactgct gtggctgaaa ggcgatgaac
      961 ctgtcaccgt cgagggcaaa acgttgcctc tgaacgaagc gctacagtgg cacttcgaac
     1021 tgaccgtcaa caccgccaac attgttgaga attacgccac gcttacccgc agcgaaacac
     1081 tgctgccgct ggtgggcgat aaagcgaagt tacagcatta cgccgcgacg acgccgattg
     1141 tcgacatggt gcgtttctct ccggcgcaac tggatgccga agcgctgatt aatctgctgc
     1201 gcccgctgac cccgcgcctg tattccatcg cctcctcgca ggcggaagtc gagaacgaag
     1261 tacacgtcac cgttggtgtg gtgcgttacg acgtggaagg ccgagcccgt gccggtggtg
     1321 cctccagctt cctcgcggat cgcgtggaag aagagggcga agtccgcgta tttatcgaac
     1381 ataacgataa ctttcgcctg cccgctaacc cggaaacccc ggtgattatg attggcccag
     1441 gcaccggtat tgcgccgttc cgcgccttta tgcagcaacg cgccgccgac gaagcgccag
     1501 gtaaaaactg gctgttcttt ggtaatccgc actttacgga agacttcctg taccaggtgg
     1561 agtggcagcg ctacgtcaaa gatggcgtgc tgacacgtat cgatcttgcc tggtcgcgcg
     1621 accaaaaaga aaaagtttac gtacaagaca aactgcgcga acagggcgcg gagctgtggc
     1681 gctggatcaa tgatggtgcc cacatttatg tctgcggcga cgctaatcgc atggcgaaag
     1741 acgttgagca ggcacttctg gaagtgattg ccgaatttgg tggcatggac atcgaagcgg
     1801 cggatgaatt tttaagtgag ctgcgcgtag agcgccgtta tcagcgagat gtctactaat
     1861 gagcgaaaaa catccagggc ctttagtggt cgaaggaaaa ctgacagacg ccgagcgcat
     1921 gaagcttgaa agcaactacc tgcgcggcac cattgcggaa gatttaaacg acggtctgac
     1981 cggcggcttt aagggcgaca acttcctgct gatccgcttc cacggcatgt atcagcagga
     2041 tgaccgcgac atccgcgccg aacgtgctga acagaagctg gagccgcacc acgcgatgct
     2101 gcttcgctgt cgtctgccgg gtggggtgat taccactaaa cagtggcagg cgatcgacaa
     2161 atttgccggt gaaaacacca tctatggcag cattcgcctg accaaccgcc agacattcca
     2221 gttccacggc attctgaaaa agaacgtcaa accggtgcac cagatgctgc actcggtcgg
     2281 tcttgatgcg ctggcgacag ctaacgacat gaaccgtaac gtactctgca cctcgaaccc
     2341 ttacgagtcg cagctgcacg cggaagcgta cgagtgggcg aagaagattt ctgagcatct
     2401 gttgcctcgt acccgcgcgt atgcggagat ctggctcgac caggaaaaag tcgccactac
     2461 tgatgaagaa ccgatccttg gtcagaccta cctgccgcgt aagttcaaaa ccacggtagt
     2521 gatcccgccg cagaacgata tcgatctgca tgccaacgac atgaacttcg tggcaatcgc
     2581 cgaaaacggc aagctggtag gcttcaacct gctggtgggc ggtgggcttt ctatcgaaca
     2641 cggcaacaag aaaacttacg cccgcacggc gagcgagttt ggctatctgc cgctggagca
     2701 tacgctggcg gtggccgaag ctgtcgtgac aactcagcgt gactggggta accgaaccga
     2761 tcgtaaaaat gccaaaacca aatacacgct ggagcgcgtg ggggttgaga cgtttaaagc
     2821 ggaagtggag cgtcgcgcgg ggatcaaatt tgaaccgatc cgtccatatg agttcaccgg
     2881 acgaggcgat cgtattggct gggttaaggg cattgatgat aactggcacc tgacgctgtt
     2941 tatcgaaaat ggtcgcatcc ttgattatcc ggggcgtccg ctgaaaaccg gcctgctgga
     3001 gatcgcgaag atccacaaag gcgatttccg cattacggcg aaccagaatc tgatcatcgc
     3061 cggtgtaccg gaaagcgaga aagcgaagat cgagaagatc gccaaagaga gcgggttaat
     3121 gaatgccgtc acgccgcagc gtgaaaactc gatggcctgc gtgtcattcc cgacttgccc
     3181 gctggcgatg gcggaagcag agcgtttcct gccgtctttt atcgacaaca tcgataattt
     3241 aatggcgaaa catggtgtca gcgatgagca tatcgtgatg cgtgtaacag gctgcccgaa
     3301 cggttgtggt cgcgcgatgc tggcggaagt gggcctggtg ggtaaagcgc cgggtcgcta
     3361 caacctgcat cttggcggca accgcattgg gacacgtatc ccacggatgt ataaagaaaa
     3421 catcaccgag ccggaaatcc tggcgtcgct tgatgaactg atagggcgct gggcgaaaga
     3481 gcgcgaagcg ggtgaaggct tcggcgactt tacggtgcgt gcgggcatca ttcgcccggt
     3541 gctcgatccg gcgcgcgatt tgtgggatta accatcagcc cggtcttgta ggcctgataa
     3601 gaacgcgtga gcgtcgcatc aggcaaggca aacagtgagg aatctatgtc caaactcgat
     3661 ctaaacgccc tgaacgaact gccgaaggta gatcgcattc tggcgctggc ggaaactaac
     3721 gccgaactgg aaaaactgga cgctgaaggc cgcgtagcct gggcgctgga taatctgccc
     3781 ggtgaatatg tactttcttc cagctttggc attcaggcgg cggtgagcct gcatctggtg
     3841 aatcaaattc gcccggatat tccggtgatc ctcaccgata cgggttactt gttcccggaa
     3901 acctaccgct ttattgacga gttaacggac aaactcaagc tcaacctgaa agtgtaccgt
     3961 gctaccgaaa gcgcagcctg gcaggaagca cgctacggaa aactgtggga gcagggcgtt
     4021 gaaggcattg aaaagtacaa tgacatcaac aaagtcgaac cgatgaaccg ggctctgaaa
     4081 gaacttaacg cgcaaacctg gtttgctggc ctgcgccgtg aacaatccgg cagtcgcgcc
     4141 aatttaccgg tgctggcaat tcagcgtggc gtatttaaag tgctgccgat tatcgactgg
     4201 gataaccgaa ctatttatca gtacctgcaa aaacatggcc tgaaatatca cccattatgg
     4261 gatgaaggat atttatcggt cggtgatacc catacaaccc gtaaatggga acctggcatg
     4321 tcggaagaag aaacacgttt ctttggctta aaaagggaat gtggattgca cgaagggtaa
     4381 atattgccgg ataaattaaa cgcctctgtc agaaatgatg ggggcgtttt tattttgcga
     4441 gcagtattcc tgattttaaa cgtgaacgcc gctggaagaa ttatcaggta tagaatggcg
     4501 tcgggtgctt gaggctgtct ggcgttaagc attcgcgagg ttccagatgg acaaaagccc
     4561 caggcgatat ttctatcaac ctgaggccag cgttcgaacc caaacaattc gaatgttagt
     4621 ctcttctttg cagggaggca agacatgctg acaaaatatg cccttgtggc aat
//
LOCUS       DADMJE010000218         4662 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.221, whole genome shotgun sequence.
ACCESSION   DADMJE010000218 DADMJE010000000
VERSION     DADMJE010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4662)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4662)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4662
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.221"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..755)
                     /locus_tag="JN001_003850"
     CDS             complement(<1..755)
                     /locus_tag="JN001_003850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic diguanylate phosphodiesterase"
                     /protein_id="HAY9054908.1"
                     /translation="MQKAQRIIKTYRRNRMIVCTICALVTLASTLSVRFISQRNLNQQ
                     RVVQFANHAVEELDKVLLPLQAGSEVLLPLIGLPCSVAHLPLRKQAAKLQTVRSIGLV
                     QDGTLYCSSIFGYRNVPVVDILAELPAPQPLLRLTIDRALIKGSPVLIQWTPAAGSSN
                     AGVMEMINIDLLTAMLLEPQLQQISSASLTVDKRHLLYGNGLVDSLPQPEDNENYQVS
                     SQRFPFTINVNGPGATALAWHYLPTQLPLAVLL"
     gene            complement(886..2250)
                     /locus_tag="JN001_003851"
     CDS             complement(886..2250)
                     /locus_tag="JN001_003851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine dehydratase 1"
                     /protein_id="HAY9054909.1"
                     /translation="MISLFDMFKVGIGPSSSHTVGPMKAGKQFVDDLVEKGLLDSVTR
                     VAVDVYGSLSLTGKGHHTDIAIIMGLAGNEPATVDIDSIPGFIRDVEERERLLLAQGR
                     HEVDFPRDNGMRFHNGNLPLHENGMQIHAYNGDEVVYSKTYYSIGGGFIVDEEHFGQD
                     AANEVSVPYPFKSATELLAYCNETGYSLSGLAMQNELALHSKKEIDEYFAHVWQTMQA
                     CIDRGMNTEGVLPGPLRVPRRASALRRMLVSSDKLSNDPMNVIDWVNMFALAVNEENA
                     AGGRVVTAPTNGACGIVPAVLAYYDHFIESVSPDIYTRYFMAAGAIGALYKMNASISG
                     AEVGCQGEVGVACSMAAAGLAELLGGSPEQVCVAAEIGMEHNLGLTCDPVAGQVQVPC
                     IERNAIASVKAINAARMALRRTSAPRVSLDKVIETMYETGKDMNAKYRETSRGGLAIK
                     VQCD"
     gene            complement(2434..3012)
                     /locus_tag="JN001_003852"
     CDS             complement(2434..3012)
                     /locus_tag="JN001_003852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HAY9054910.1"
                     /translation="MEYRSLTLDDFLSRFQLLRPQINRETLNHRQAAVLIPIVRRPQP
                     GLLLTQRSIHLRKHAGQVAFPGGAVDDTDASVIAAALREAEEEVAIPPSAVEVIGVLP
                     PVDSVTGYQVTPVIGIIPPDLPYRASEDEVSAVFEMPLAQALHLGRYHPLDIYRRGDS
                     HRVWLSWYEQYFVWGMTAGIIRELALQIGVKP"
     gene            complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JN001_003853"
     CDS             complement(3016..4377)
                     /gene="pabB"
                     /locus_tag="JN001_003853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component 1"
                     /protein_id="HAY9054911.1"
                     /translation="MKTLSPAVITLPWRQDAAEFYFSRLSHLPWAMLLHSGYADHPYS
                     RFDIVVAEPICTLTTFGKETVVSESEKRTTTTDDPLQVLQQVLDRADIRPTHNEDLPF
                     QGGALGLFGYDLGRRFESLPEIAEQDIVLPDMAVGIYDWALIVDHQRHTVSLLSHNDV
                     NARRAWLESQQFSPQEDFTLTSDWQSNMTREQYGEKFRQVQEYLHSGDCYQVNLAQRF
                     HATYSGDEWQAFLQLNQANRAPFSAFLRLEQGAILSLSPERFILCDNSEIQTRPIKGT
                     LPRLPDPQEDSKQAEKLANSAKDRAENLMIVDLMRNDIGRVAVAGSVKVPELFVVEPF
                     PAVHHLVSTITARLPEQLHASDLLRAAFPGGSITGAPKVRAMEIIDELEPQRRNAWCG
                     SIGYLSFCGNMDTSITIRTLTAINGQIYCSAGGGIVADSQEEAEYQETFDKVTKILRQ
                     LEK"
     gene            4451..4630
                     /locus_tag="JN001_003854"
     CDS             4451..4630
                     /locus_tag="JN001_003854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaH family protein"
                     /protein_id="HAY9054912.1"
                     /translation="MFAGLPSLTHEQQQKAVERIQELMAQGMSSGQAIALVAEELRAN
                     HSGERIVARFEDEDE"
BASE COUNT         1170 a         1198 c         1212 g         1082 t
ORIGIN      
        1 cttagcagca ccgccagcgg taattgtgtt ggaagatagt gccatgccag cgccgtagcc
       61 cccggaccat taacgttaat ggtaaaagga aagcgttgcg aagaaacctg atagttttca
      121 ttgtcttcag gttgcggaag ggaatctacc agcccattac catagagcaa atgccgtttg
      181 tccaccgtca ggctggcgct actgatttgc tgcagttgtg gttcaaggag cattgccgtc
      241 agtaagtcga tgttaatcat ctccatgacc ccagcattgc tactgcccgc tgcaggcgtc
      301 cattgaatca aaaccggact gcctttaatc agggcacggt cgatcgtcag gcgtaaaagt
      361 ggttgcggtg caggaagttc agccagaatg tccacgacgg gcacattgcg ataaccaaaa
      421 atgctggagc aatagagtgt gccgtcttgc accaggccaa tggatcgcac agtttggagt
      481 tttgccgcct gtttacgtaa tggcaaatgg gcgacagagc agggcagacc aatcagcgga
      541 agcaagactt cgctacctgc ctgtagggga agcagtactt tatctaattc ctctacagcg
      601 tgattggcga attgtactac ccgttgttga tttaagttac gctgtgaaat aaatcgcacg
      661 ctcagggtcg aagcgagcgt aacgagtgcg caaatcgtac aaacaatcat tcgattacgt
      721 cgataggttt taatgatccg ttgtgctttt tgcatgcggg ccaccctgta agcgtatggc
      781 gacaaacgcc tgacgcaaca gtggatgtgt agtggggaat attacagcag acgagaaagc
      841 gggtataaat tcgcccatcc gttgcagatg ggcgagtaag aagtattagt cacactggac
      901 tttgattgcc agaccaccgc gtgaggtttc gcggtatttg gcgttcatgt ccttaccggt
      961 ttcgtacatc gtttcgatga ccttatccag cgagacgcgc ggtgcactgg tgcggcgcag
     1021 agccatccgt gcggcgttaa tcgccttcac agaggcaatg gcattacgct caatgcacgg
     1081 cacctgaacc tgccctgcaa ccgggtcgca ggttaaacca aggttgtgtt ccatgccaat
     1141 ttccgccgcc acgcaaacct gttccgggct accgcccagc agttctgcaa gacccgcagc
     1201 agccattgaa caggcaacac ccacttcgcc ctggcaacca acttccgcac cggaaataga
     1261 ggcgttcatt ttatacaatg caccaatcgc gcccgctgcc ataaagtaac gggtatagat
     1321 gtccgggctg accgattcaa taaagtggtc atagtaagcc agcactgccg gaacgatacc
     1381 gcaggcaccg ttggttggcg cagttaccac acgaccaccg gcggcgtttt cttcgttaac
     1441 tgccagcgca aacatgttta cccagtcaat gacattcatc ggatcgttag acagtttatc
     1501 gctggaaacc agcatccggc gcagggcaga cgcacgacgt ggcacgcgca gcgggcctgg
     1561 cagtacacct tcggtgttca tcccgcgatc gatacatgcc tgcatggttt gccagacatg
     1621 cgcgaaatac tcgtcgatct ctttcttgct gtgcagcgcc agttcgttct gcatagcgag
     1681 accagacagc gaatagccgg tttcattaca gtacgcgagc agttcggtgg cagatttgaa
     1741 cggatacggc acgctcactt cgttggcagc atcctgacca aagtgttctt catcgacgat
     1801 aaaaccgccg ccgatggaat aataagtttt gctgtagacg acttcatcgc cgttataggc
     1861 gtggatttgc ataccgtttt catgcagcgg caggttgccg ttatgaaaac gcatcccgtt
     1921 gtcgcgcggg aaatccactt catgccgtcc ctgtgccagc agcagacgtt cgcgctcttc
     1981 tacgtcgcga ataaaaccgg gaatactgtc gatatccacg gtggcaggtt cgttacctgc
     2041 aagacccata ataatggcga tatcggtgtg gtggccttta cccgtcagcg acagtgaacc
     2101 ataaacgtcc acggcaacgc gagtaacgct atccagtaag cctttttcga ccagatcatc
     2161 gacgaactgt ttacccgcct tcataggccc tacggtatgg gaagatgagg gaccaatccc
     2221 caccttaaac atgtcgaata gactaatcac gataatactc ctgacaaggt gactggactt
     2281 ccagtaacga actaataaca gcgcatagtg taagagggaa cgcggcgact ggcttaacta
     2341 ttcacatgaa ttaaactaat caaaaaccgc gatttaacta atattgcgat gattgtctca
     2401 agtagtgttt tgtagatgta aagataagta tagtcagggt ttcacaccaa tttgcagcgc
     2461 cagctcacga attatgcctg cggtcattcc ccatacaaaa tactgttcgt accaggacag
     2521 ccatacccga tgtgaatcgc cacggcggta gatatctaaa gggtgataac gacccagatg
     2581 taatgcctgg gcgagcggca tttcaaacac cgccgagact tcatcttcac tggcgcgata
     2641 cggcagatcg ggcgggataa tgccgatcac tggggttacc tgatagccag ttacgctatc
     2701 gacgggcggc agcacgccga taacttcaac ggcggaaggc ggtatagcga cctcttcttc
     2761 agcttcgcgc agcgcggcgg cgataactga tgcgtccgtg tcatcgactg cacctccagg
     2821 gaatgccact tgtccagcgt gtttacgcag atgaattgaa cgctgagtca gcaacaaccc
     2881 cggttgcggt cgacggacga tggggattaa cacggcagcc tgacgatgat ttagggtttc
     2941 ccggttaatt tgcgggcgca aaagttgaaa gcgagataaa aaatcatcaa gcgtcaggct
     3001 acggtattcc acgtcttact tctccagttg gcgtaatatc ttagtaactt tatcaaaagt
     3061 ttcctgatat tccgcttctt cctggctatc ggcgacaatt ccaccgcccg cagagcagta
     3121 tatttgtccg ttaatggcag tcagcgtgcg gatagtaatg ctggtatcca tgttgccgca
     3181 aaagctcaaa tagccaatgc tgccgcacca ggcattacgt cgctgcggtt ccagttcgtc
     3241 gataatttcc atagcccgta ctttcggagc cccggttatt gagccaccag gaaaagctgc
     3301 gcgcagcaga tcgctggcgt gtaactgttc tggtagtcgc gccgttatag tgctgaccag
     3361 atgatgcacg gcagggaagg gttccaccac gaagagctct ggtactttta ccgaaccggc
     3421 tacggcaaca cgaccgatat cattacgcat taaatcgaca atcatcagat tttcggcacg
     3481 atctttcgct gagttcgcca gtttttctgc ttgtttgcta tcttcctgag gatcgggcag
     3541 gcgtggtagc gtgcctttaa tcgggcgggt ctggatttca ctattatcac aaagaataaa
     3601 ccgctctggc gaaaggctta aaattgcacc ctgttcaaga cgtaaaaaag cgctaaatgg
     3661 cgcgcggttg gcctgattaa gctgaaggaa tgcctgccat tcatcgccag aataggtcgc
     3721 atgaaaacgc tgggcgagat tcacctgata gcaatcaccg ctgtgcagat attcctgtac
     3781 ctggcgaaat ttttcgccgt actgctcgcg ggtcatattg gattgccagt cggaagtgag
     3841 cgtgaaatct tcctgcggcg agaattgctg gctttccagc caggcccgac gggcattgac
     3901 atcattatga ctcagcaaag aaactgtatg acgctggtgg tcgacaatga gcgcccaatc
     3961 gtagataccc actgccatat ccggcagaac gatatcttgt tccgcaattt ctggcagtga
     4021 ctcaaaacgg cggcccagat cgtagccaaa caaccccagt gcgccgccct gaaatggcaa
     4081 atcttcgtta tgcgttgggc gaatgtctgc gcgatccagc acctgctgga gcacctgtag
     4141 cgggtcatca gtggtcgttg tgcgtttttc gctttcacta acaacggttt ctttaccgaa
     4201 agtggttaaa gtgcaaatcg gctcggcgac cacaatatca aagcggctat acggatgatc
     4261 ggcatagccg gagtgtaaaa gcatcgccca cggcaggtgg cttaagcggg agaaataaaa
     4321 ttcagcggcg tcctgacgcc agggtaaagt aatcacagcg ggagataacg tcttcatcag
     4381 tcctgactct actggctatg tgccgggtag catgaaataa ttagcgccaa caatttagca
     4441 ggagttaaca atgtttgcag gtttaccttc actcacccat gaacagcagc aaaaagctgt
     4501 cgagcggatc caggaactga tggcacaagg gatgagcagc ggccaggcaa tcgcgctggt
     4561 ggcagaagag ctgcgtgcca accactccgg cgagcgaatc gtggcgcgtt ttgaggatga
     4621 agacgagtaa cacactaatc cgtatcgatt tcgttataga ag
//
LOCUS       DADMJE010000219         4586 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.222, whole genome shotgun sequence.
ACCESSION   DADMJE010000219 DADMJE010000000
VERSION     DADMJE010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4586)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4586)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4586
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.222"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            251..616
                     /gene="queD"
                     /locus_tag="JN001_003855"
     CDS             251..616
                     /gene="queD"
                     /locus_tag="JN001_003855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-carboxytetrahydropterin synthase QueD"
                     /protein_id="HAY9054913.1"
                     /translation="MMSTTLFKDFTFEAAHRLPHVPEGHKCGRLHGHSFMVRLEITGE
                     VDPHTGWIIDFAELKAAFKPTYERLDHHYLNDIPGLENPTSEVLAKWIWDQVKPVVPL
                     LSAVMVKETCTAGCIYRGE"
     gene            694..1962
                     /locus_tag="JN001_003856"
     CDS             694..1962
                     /locus_tag="JN001_003856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HAY9054914.1"
                     /translation="MEDDCDIIIIGAGIAGTACALRCARAGLSVLLLERAEIPGSKNL
                     SGGRLYTHALAELLPQFHLTAPLERRITHESLSLLTPDGVTTFSSLQPGGESWSVLRA
                     RFDPWLVAEAEKEGVECIPGATVDALYEENGRVCGVICGDDILRARYVVLAEGANSVL
                     AERHGLVTRPAGEAMALGIKEVLSLETSAIEERFHLENNEGAALLFSGGICDDLPGGA
                     FLYTNQQTLSLGIVCPLSSLTQSRVPASELLTRFKAHPAVRPLIKNTESLEYGAHLVP
                     EGGLHSMPVQYAGNGWQLVGDALRSCVNTGISVRGMGMALTGAQAAQTLISACQHREP
                     QNLFALYHHNVERSLLWDVLQRYQHVPALLQRPSWYRAWPALMQDISRDLWDQGDKPV
                     PPLRQLFWRHLRRHGLWHLAGDVIRSLRCL"
     gene            1953..2213
                     /locus_tag="JN001_003857"
     CDS             1953..2213
                     /locus_tag="JN001_003857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin family protein"
                     /protein_id="HAY9054915.1"
                     /translation="MSVAHNLWRVADAPHIVPADSVERQMVQWLINACPAGLFSLTPE
                     GDLRVDYHGCLECGTCRLLCDESTLQQWRYPPSGFGITYRFG"
     gene            2230..2805
                     /locus_tag="JN001_003858"
     CDS             2230..2805
                     /locus_tag="JN001_003858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HAY9054916.1"
                     /translation="MPLLHLLRQNPVIAAVKDNASLQLAIDSECQFISVLYGNICTIS
                     NIVKKIKNAGKYAFIHVDLLEGASNKEVVIQFLKLVTEADGIISTKASMLKAARAEGF
                     FCIHRLFIVDSISFHNIDKQVAQSNPDCIEILPGCMPKVLGWVTEKIRQPLIAGGLVC
                     DEEDACNAINAGVVALSTTNTGVWTLAKKLL"
     gene            complement(2953..3813)
                     /locus_tag="JN001_003859"
     CDS             complement(2953..3813)
                     /locus_tag="JN001_003859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417249.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit
                     alpha/FixB family protein"
                     /protein_id="HAY9054917.1"
                     /translation="MNIAIVTINQENAAIASWLAAQDFSGCTLAHWQIEPQPVVAEQV
                     LDALVEQWQRTPADVVLFPPGTFGDELSTRLAWRLHGASICQVTSLDIPTVSVRKSHW
                     GNALTATLQTEKRPLCLSLARQAGAAKNATLPSGIQQLNIVPGALPDWLVSTEDLKNV
                     TRDPLAEARRVLVVGQGGEADNQEIAMLAEKLGAEVGYSRARVMNGGVDAEKVIGISG
                     HLLAPEVCIVVGASGAAALMAGVRNSKFVVAINHDASAAVFSQADVGVVDDWKVVLEA
                     LVTNIHADCQ"
     gene            complement(3810..>4586)
                     /locus_tag="JN001_003860"
     CDS             complement(3810..>4586)
                     /locus_tag="JN001_003860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417250.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HAY9054918.1"
                     /translation="NILLAFKAEPDAGMLAEKEWQAAAQGKSGPDISLLRSLLGADEQ
                     AAAALLLAQRKNGTPMSLTALSMGDERALHWLRYLMALGFEEAVLLETAADLRFAPEF
                     VARHIAEWQHQNPLDLIITGSQSSEGQNGQTPFLLAEMLGWTCFTQVERFTLDALFIT
                     LEQRTEHGLRCCRVRLPAVIAVRQCGEVALPVPGMRQRMAAGKAEIIRKTVAAEMPAM
                     QCLQLARAEQRRGATLIDGQTVAEKAQKLWQDYLRQRMQP"
BASE COUNT         1055 a         1234 c         1165 g         1132 t
ORIGIN      
        1 aagataaggt taacggggtg aacggtgtgg attaaagacg ggatagcgat aactaataac
       61 caaatcgact aacctgtttt agcaatagtc tttaacaaca aaatagatta accaacccaa
      121 tgaaaaacaa atgaatttag ccaatcatta agataaatca gcgattttgc gcaacaaagt
      181 cgttttagat aatgcgaaaa aacagccttt ccggtactct acggcggttt tatcgtcctg
      241 tagagaaatt atgatgtcca ccacgttatt taaagatttc accttcgaag ccgctcaccg
      301 cttaccacac gtcccggaag ggcataaatg tggtcgcctg cacgggcatt cctttatggt
      361 gcgactggaa attaccgggg aagtcgatcc gcatacgggc tggattatcg atttcgctga
      421 actaaaagcg gcgtttaagc caacttatga gcgcctcgat caccattatc tcaatgatat
      481 tccaggtctg gaaaacccaa ctagcgaagt tttagcaaaa tggatttggg atcaggttaa
      541 acccgttgtg ccgctgttaa gtgcggtgat ggtaaaagaa acctgcaccg ctggttgtat
      601 ctatcgcggc gaatgataag agtgtgtcgg cggtcaattt cccttaagta acgctatgtt
      661 agggtattgt gttcaggata tctggggcat gacatggaag acgactgcga cattattatt
      721 attggtgccg gtattgcagg caccgcttgc gcgttacgct gcgcgcgagc gggtttatcc
      781 gttttgttac tggaacgcgc tgaaatcccc ggcagcaaaa atctttccgg cggacggtta
      841 tatacccatg cactcgcgga actcctccct cagtttcatc tgaccgcgcc tcttgaacga
      901 cgcatcactc acgaaagcct ttccctgtta acgcccgatg gcgtaacgac gttttccagc
      961 ttacagcccg gcggtgaatc ctggagtgta ttacgtgcac ggttcgatcc gtggctggtt
     1021 gccgaagccg aaaaagaagg tgtcgaatgt atccccggag cgacggtgga tgcactgtat
     1081 gaagaaaacg gcagagtctg tggcgttatt tgtggtgacg atattctccg cgcccgttat
     1141 gtggtgctgg cagaaggtgc caacagcgtc ctggctgaac gtcacgggtt agtgactcgt
     1201 cctgctggcg aagcgatggc gttggggatc aaagaagtgc tgtcgctgga aacatccgct
     1261 attgaagaac gttttcatct ggagaataac gaaggcgcag cgttgctgtt cagcggcgga
     1321 atctgtgatg acttacccgg cggcgcattt ctttatacta atcaacaaac gctctcgtta
     1381 gggattgttt gcccgctctc ttcccttacg caaagtcgtg ttccggcaag cgagctgctg
     1441 actcgcttta aagcgcatcc ggcagtgcgc ccgcttatca aaaacacgga atcactggag
     1501 tatggtgcgc atctggtgcc agaaggtggc ttgcacagta tgccggtgca atacgccggt
     1561 aacggctggc agctggtggg cgatgcgttg cgcagttgcg tcaataccgg aatttccgtg
     1621 cgcggcatgg gtatggcgct gactggcgcg caggcggcac aaacgctgat aagcgcctgc
     1681 cagcaccgcg agccgcaaaa tctgtttgcg ctttatcatc acaacgtaga gcgcagcctg
     1741 ctatgggatg ttctacaacg ttatcagcat gttccggcgc ttttgcaacg ccctagctgg
     1801 tatcgggcgt ggcctgcgtt aatgcaggat atttcccgcg atttatggga tcagggtgat
     1861 aaacctgttc caccgctgcg ccagttattc tggcgtcatt tacgtcgtca tggcctgtgg
     1921 catctggcgg gcgatgttat caggagtctg cgatgtctgt agcccataat ctctggcgcg
     1981 ttgctgatgc gccgcacatt gttccggctg actccgttga gcgtcagatg gtacaatggt
     2041 tgattaacgc ctgtccggca ggtctttttt cgctcacacc ggaaggtgac ttacgcgttg
     2101 attatcacgg ctgcctggag tgtggcacct gccgtttgct gtgcgacgaa tccacactac
     2161 aacagtggcg ctatccgcct tccggattcg gcatcaccta ccgctttgga taaataataa
     2221 ggataattta tgcccctctt acacctgctc cgccagaatc cggtgattgc tgccgttaaa
     2281 gataatgcca gcctgcaact ggcaatcgac tctgaatgcc agtttatttc cgtgttgtac
     2341 ggcaatatct gcaccatcag taatatcgtt aaaaagatta agaacgccgg gaaatatgct
     2401 tttattcatg ttgatttgct ggaaggcgcg tcaaataaag aagtcgtgat tcagtttttg
     2461 aaactggtga ccgaggcgga cggcattatc agtaccaaag cctcaatgtt gaaagcggca
     2521 agagcggaag gttttttctg tattcatcgc ctgtttattg ttgattcaat ttcgtttcac
     2581 aacattgata agcaagttgc gcaatcgaat ccggattgta ttgagatcct gccaggctgt
     2641 atgcccaaag tgctgggctg ggtgacagag aaaatccgcc aaccgctgat tgccggtggg
     2701 ctggtgtgcg atgaagaaga tgcgtgtaat gcgattaacg cgggtgtcgt ggcgctttcc
     2761 accacgaata ccggggtctg gacgttagcg aaaaaattac tttgacggga taatcgtaac
     2821 caattgaatt tggtttgatt tgtaggccgc acgccacatc cgacattcag cgcctgatgc
     2881 gacgcttgac gcgtcttatc aggcctacaa gtccccaggc cagaaccgta ggcaggatca
     2941 tccggcaaca cattattggc aatctgcgtg aatgtttgtc accagtgcct ccagcaccac
     3001 tttccagtca tcaaccacgc caacatctgc ctgtgaaaat accgcagcgc tggcgtcatg
     3061 attaatcgcc accacaaact tgctattgcg tacgcccgcc attaacgctg ctgcgccgga
     3121 agcgccaaca acaatacaca cctcaggtgc cagcaaatgt ccggaaatac caatcacttt
     3181 ttcagcatca acgccaccgt tcatcactcg cgcccgactg tagcccactt cggctcccag
     3241 cttttctgcc agcatagcga tttcctggtt atctgcctct ccgccctgcc ccaccaccag
     3301 cacccgtctg gcctcagcta atgggtcgcg agtaacattt ttcagatcct ctgtgctaac
     3361 cagccagtcg ggaagcgcac ccgggacaat gttcagttgt tgtattccag agggcaacgt
     3421 ggcgtttttc gctgctcccg cctgacgcgc cagagaaagg catagcgggc gtttttctgt
     3481 ttgcagcgtc gccgttagcg catttcccca gtgggatttg cgcacgctta cggttggaat
     3541 atctaacgaa gtcacctggc agatgcttgc accatgtaaa cgccaggcca gccgggtcga
     3601 cagttcatcg ccaaacgttc ccggcggaaa gagaacaacg tccgcaggcg ttcgctgcca
     3661 ctgttccacc aacgcatcca gcacctgttc cgccactaca ggctgaggtt caatctgcca
     3721 gtgcgccagg gtacaaccac tgaaatcctg cgccgccagc cagcttgcta ttgcggcatt
     3781 ctcctgattt attgtcacaa ttgcgatatt catggctgca tcctttggcg taaatagtcc
     3841 tgccatagct tttgagcttt ttctgctacc gtttgcccat caatcagcgt cgctccgcgt
     3901 cgttgctctg ctcttgccag ttgcagacac tgcatcgctg gcatttcggc agcaacagtt
     3961 ttacggataa tttctgcttt ccccgcagcc attcgctggc gcattcccgg tactggcaag
     4021 gccacttcac cgcactgacg cacggcaatc accgcaggca agcgaacccg gcaacaacgc
     4081 aacccatgtt cagtacgctg ttcgagggtg ataaacagcg cgtcgagagt gaaacgctcc
     4141 acctgggtga agcaggtcca gcccagcatt tccgccagca aaaatggcgt ttgcccattc
     4201 tgcccttcgc tgctttggct gccggtaatt atcagatcca gcggattctg atgctgccat
     4261 tcggcaatat ggcgagcgac aaattccggc gcaaagcgca gatctgccgc cgtctccagc
     4321 aatacagctt cctcaaaccc aagagccatg agatagcgca gccagtgcaa tgcccgttca
     4381 tcccccatgc tcaacgcggt taaagacatc ggcgtaccgt tttttctctg cgccaacagc
     4441 agcgcggcag cggcctgttc atcagcaccg agtaaacttc gcagtagcga aatatccggt
     4501 ccgcttttac cctgagccgc cgcctgccac tctttttccg ccagcattcc ggcatccggt
     4561 tcggctttaa acgctaacag aatgtt
//
LOCUS       DADMJE010000220         4436 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.223, whole genome shotgun sequence.
ACCESSION   DADMJE010000220 DADMJE010000000
VERSION     DADMJE010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4436
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.223"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1088
                     /gene="nadB"
                     /locus_tag="JN001_003861"
     CDS             <1..1088
                     /gene="nadB"
                     /locus_tag="JN001_003861"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HAY9054919.1"
                     /translation="VGAWVWNRNKETVETCHAKAVVLATGGASKVYQYTTNPDISSGD
                     GIAMAWRAGCRVANLEFNQFHPTALYHPQARNFLLTEALRGEGAYLKRPDGTRFMPDF
                     DERGELAPRDIVARAIDHEMKRLGADCMFLDISHKPADFIRQHFPMIYEKLLGLGIDL
                     TQEPVPIVPAAHYTCGGVMVDDHGRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLV
                     YGWSAAEDITRRMPDAHGVSTLPPWDESRVENPDERVVIQHNWHELRLFMWDYVGIVR
                     TTKRLERALRRINMLQQEIDEYYAHFRVSNNLLELRNLVQVAELIVRCAMMRKESRGL
                     HFTLDYPELLTHSGPSILSPGNHYINR"
     gene            complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JN001_003862"
     CDS             complement(1073..1810)
                     /gene="trmN"
                     /locus_tag="JN001_003862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417070.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA(1)(Val)
                     (adenine(37)-N(6))-methyltransferase TrmN"
                     /protein_id="HAY9054920.1"
                     /translation="MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAG
                     VKRCLDIGAGSGLLALMLAQRTSDSVIIDAVELESEAAAQAQENINQSPWAERINVHT
                     ADIQQWLTQQTVRFDLIISNPPYYQQGVECAIPQREQARYTTTLDHPSLLTCAAECIT
                     EEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFS
                     DRLVIRGPDQNYSEAYTALTQAFYLFM"
     gene            1942..3276
                     /gene="srmB"
                     /locus_tag="JN001_003863"
     CDS             1942..3276
                     /gene="srmB"
                     /locus_tag="JN001_003863"
                     /EC_number="3.6.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase SrmB"
                     /protein_id="HAY9054921.1"
                     /translation="MTVTTFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDV
                     LGSAPTGTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKH
                     THLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEAD
                     RMLDMGFAQDIEHIAGETRWRKQTLLFSATLEGDAIQDFAERLLEDPVEVSANPSTRE
                     RKKIHQWYYRADDLEHKTALLVHLLKQPEATRSIVFVRKRERVHELANWLREAGINNC
                     YLEGEMVQGKRNEAIKRLTEGRVNVLVATDVAARGIDIPDVSHVFNFDMPRSGDTYLH
                     RIGRTARAGRKGTAISLVEAHDHLLLGKVGRYIEEPIKARVIEELRPKTRTPSEKQTG
                     KPSKKVLAKRAEKKKAKEKEKPRVKKRHRDTKNIGKRRKPSGTGVPPQTTEE"
     gene            complement(3485..4366)
                     /locus_tag="JN001_003864"
     CDS             complement(3485..4366)
                     /locus_tag="JN001_003864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311470.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054922.1"
                     /translation="MDLRRFITLKTVVEEGSFLRASQKLCCTQSTVTFHIQQLEQEFS
                     VQLFEKIGRRMCLTREGKKLLPHIYELTRVMDTLREAAKKGSDPDGELRVVSGETLLS
                     YRMPQVLQRFRQRAPKVRLSLQSLNCYVIRDALLNDEADVGVFYRVGNDDALNRRELG
                     EQSLVLVASPQIADVDFTEPGRHNACSFIINEPQCVFRQIFESTLRQRRITVENTIEL
                     LSIESIKRCVAANIGVSYLPRFAVEKELESGELIELPFGEQSQTITAMCAHHAGKAVS
                     PAMHTFIQCIEECFLPG"
BASE COUNT         1125 a         1209 c         1125 g          977 t
ORIGIN      
        1 ttgtaggcgc gtgggtatgg aaccgaaata aagaaacggt ggaaacctgc cacgcaaaag
       61 cagtggtact ggcaaccggc ggtgcgtcga aggtgtatca gtacaccacc aatccggata
      121 tttcttctgg cgatggcatt gctatggcgt ggcgcgcggg ctgtcgggtt gccaatctcg
      181 aatttaatca gttccaccct accgcactgt atcacccaca ggcacgcaat ttcctgttaa
      241 cggaagcact gcgcggcgaa ggcgcttatc tcaagcgccc ggatggcacg cgttttatgc
      301 ccgattttga tgagcgcggc gaactggccc cgcgcgatat tgtcgcccgc gccattgacc
      361 atgaaatgaa acgcctcggc gcagattgta tgttcctcga catcagccat aagcccgccg
      421 attttattcg ccagcatttc ccgatgattt atgaaaaatt gctcgggctg gggattgatc
      481 tcacacaaga accggtaccg attgtgcctg ctgcacacta tacctgcggt ggtgtaatgg
      541 ttgatgatca tgggcgtacg gacgtcgagg gcttgtatgc cattggcgag gtgagttata
      601 ccggcttaca cggcgctaac cgcatggcct cgaattcatt gctggagtgt ctggtctatg
      661 gctggtcggc ggcagaagat atcaccagac gtatgcctga tgcccacggc gtcagtacgt
      721 taccaccgtg ggatgaaagc cgcgttgaga accctgacga acgggtagta attcagcata
      781 actggcacga gctacggctg tttatgtggg attacgtcgg cattgtgcgc acaacaaaac
      841 gtcttgagcg cgccctgcgg cgtatcaata tgttgcaaca ggaaatagac gaatattacg
      901 cccacttccg cgtgtcgaat aatttgctgg agctgcgtaa tctggtgcag gttgcggaat
      961 tgattgttcg ctgtgccatg atgcgcaagg agagtcgtgg cctgcatttc acactggatt
     1021 atccggaact gctcacccat tccggtccgt cgatcctttc ccccggcaat cattacataa
     1081 acagataaaa agcctgggtc agcgccgtat acgcttcgga atagttctgg tctggcccac
     1141 gaatgactaa gcgatcgcta aagcattctc ccgcctgcgg ggagaatgcc agcagcaccc
     1201 gatgcggcag tcgcgcttcg ttttccgcca catccgtccg caaacgtaaa tgccagccca
     1261 tgcttaatgc cagctccgta aaaccattac caatctgctc tggcagcact acgcagaaaa
     1321 atccctcttc ggtaatgcac tccgccgcac aggtcagcag cgatgggtga tcaagcgtag
     1381 tggtatagcg agcctgttcc cgttgaggga tcgcgcactc tactccctgc tgatagtaag
     1441 gtgggttact gatgattaaa tcgaagcgta ctgtctgctg tgtgagccac tgctgaatat
     1501 ccgccgtatg gacgttaatc cgctctgccc acggggactg gttgatattt tcctgcgcct
     1561 gcgcggcagc ttcactttcc agctcaacgg catcaattat cacgctgtca ctggttcgct
     1621 gcgccagcat cagtgccagc aacccgctac ccgcgccgat atcaaggcaa cgtttcaccc
     1681 cagccaccgg tgcccatgcg cccagcaaaa tgccatccgt tcccactttc atcgcacagc
     1741 gatcgtgagc aacaaaaaac tgtttaaaag taaatccatt acgacgaagc acggatgtag
     1801 actgtgacat gaaaataaaa ccttgcagga aaaacggcga tagcaccggg tgagaacaat
     1861 acccgagaag cgatatccat acaaacagat gaagattgca gccgtaacgt ctataatcag
     1921 cgccccacac agaggtagaa catgactgta acgacttttt ccgaacttga actcgacgaa
     1981 agcctgctgg aagccctcca ggataaaggt ttcactcgcc cgaccgccat tcaggctgcc
     2041 gccattccgc ctgcgctcga tggccgtgat gtactcggtt ctgcgccgac aggcaccggt
     2101 aaaacggcgg cgtatctgct gccagcgttg cagcacctgc tcgatttccc gcgtaagaaa
     2161 tccggtccgc cgcgtatttt gatcctcacc ccaactcgcg agctggcgat gcaggtggcc
     2221 gatcatgccc gcgaactggc gaaacatacg catctggata tcgccaccat taccggcggc
     2281 gtagcctata tgaaccacgc ggaagtgttc agcgaaaatc aggacatcgt ggtcgccacg
     2341 accggacgtc tgctgcaata cataaaagaa gagaacttcg attgccgcgc ggttgaaacg
     2401 ctgatcctcg acgaagcaga ccgtatgctg gatatgggct tcgctcagga tatcgaacat
     2461 attgctggcg aaacgcgctg gcgtaaacag accctgctct tttcggcaac gctggaaggc
     2521 gatgcgattc aggactttgc cgagcgtctg ctggaagatc cggtggaggt ttctgccaat
     2581 ccgtccaccc gtgagcgcaa aaaaattcat cagtggtatt accgcgccga tgacctggaa
     2641 cataaaaccg cattgctggt gcatctgtta aaacagccgg aagcgacccg ctcaattgtg
     2701 tttgtgcgta agcgtgaacg tgtgcatgag ctggcaaact ggctgcgcga agcgggcatc
     2761 aacaactgct atctcgaagg tgagatggta cagggcaagc gtaatgaagc gattaaacgc
     2821 ctgaccgaag gccgcgtaaa cgtactggta gcaaccgatg ttgccgcgcg cggtatcgac
     2881 attccagacg tcagccacgt ctttaacttc gatatgccgc gcagtggtga tacttatttg
     2941 caccgtatcg gacgtaccgc gcgcgccggt cgtaaaggca ccgcgatttc gctggtggaa
     3001 gcccatgacc atctgctgct tggcaaagtt ggccgttata ttgaagagcc gataaaagct
     3061 cgcgtcattg aggaactacg cccgaaaacg cgtacgccaa gcgagaagca gaccggcaag
     3121 ccatcgaaga aagtactggc aaaacgcgcc gagaagaaaa aagctaaaga gaaagagaag
     3181 ccgcgggtga aaaaacgcca tcgcgacacc aaaaatattg gtaagcgccg taaaccgagc
     3241 ggaacgggcg tgccaccgca aacgacagaa gagtaatctt aattccgggt ttaagcccgg
     3301 aattaaaagt gctggcaaac gcaaaactgc ctgatgcgct acgcttatca ggcctacatg
     3361 gctcatgcaa tatattgaat ttgcacgatc ttgtaggccg gataaggcgt tcacgccgca
     3421 tccggcatga acaaaacgca cttcgtcgac aagttgggtg ccgggtttaa gcccggcatt
     3481 atttttatcc cggcaaaaaa cactcttcaa tacactgaat aaaagtgtgc atcgccgggc
     3541 taaccgcttt tccagcatgg tgtgcgcaca tagccgtaat ggtctgcgac tgttcgccaa
     3601 aaggcaattc aattaattct ccgctctcaa gctctttttc caccgcaaag cggggcaagt
     3661 aactgacacc gatattcgcc gcgacacaac gtttgatact ttcaatgctt aacagctcaa
     3721 tggtgttttc caccgtgatc cgccgctgac gcagcgtgct ctcaaatatc tgccggaaga
     3781 cacattgcgg ttcgttgata ataaagctac aggcgttatg tcttcccggc tcagtaaaat
     3841 cgacatctgc aatttgcggt gaagccacca gcaccagcga ttgttcaccc aactctcgtc
     3901 ggttcagggc atcatcattc cctacgcgat aaaagacgcc gacatcggcc tcatcattca
     3961 gtagcgcatc acggatcacg taacagttca gcgactgcaa cgataaacgc acttttggtg
     4021 cgcgttgccg aaaacgctgc aacacctgcg gcattcggta agagagcaac gtttcgcccg
     4081 aaacaacgcg tagttccccg tccggatctg accccttttt ggcagcctca cgaagcgtat
     4141 ccatcactcg ggtaagttca taaatgtgcg gcagcaactt ttttccttcg cgggtaaggc
     4201 acatccgtcg gccaattttc tcaaataact ggactgaaaa ctcctgctca agctgctgaa
     4261 tatgaaaagt caccgtcgat tgtgtacagc acaatttttg cgaagctcgc aaaaaggaac
     4321 cctcttccac cacggtttta agcgtaataa aacggcgcag atccataacc ccgaacctat
     4381 cgaaaatatc gaatctagaa tataaaaaca ttcatttttt taaatgttct gtgtcg
//
LOCUS       DADMJE010000221         4429 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.224, whole genome shotgun sequence.
ACCESSION   DADMJE010000221 DADMJE010000000
VERSION     DADMJE010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4429
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.224"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            127..456
                     /locus_tag="JN001_003865"
     CDS             127..456
                     /locus_tag="JN001_003865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311560.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF883 domain-containing protein"
                     /protein_id="HAY9054923.1"
                     /translation="MFNRPNRNDVDDGVQDIQNDVNQLADSLESVLKSWGSDAKGEAE
                     AARSKAQALLKETRARMHGRTRVQQAARDAVGCADSFVRERPWCSVGTAAAVGIFIGA
                     LLSMRKS"
     gene            704..949
                     /gene="nrdH"
                     /locus_tag="JN001_003866"
     CDS             704..949
                     /gene="nrdH"
                     /locus_tag="JN001_003866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin-like protein NrdH"
                     /protein_id="HAY9054924.1"
                     /translation="MRITIYTRNDCVQCHATKRAMENRGFDFEMINVDRVPEAAEALR
                     AQGFRQLPVVIAGDLSWSGFRPDMINRLHPAPHAASA"
     gene            946..1356
                     /gene="nrdI"
                     /locus_tag="JN001_003867"
     CDS             946..1356
                     /gene="nrdI"
                     /locus_tag="JN001_003867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class Ib ribonucleoside-diphosphate reductase
                     assembly flavoprotein NrdI"
                     /protein_id="HAY9054925.1"
                     /translation="MSQLVYFSSSSENTQRFIERLGMPAVRIPLNERERIQVDEPYIL
                     IVPSYGGGGTAGAVPRQVIRFLNDEHNRALLRGVIASGNRNFGEAYGRAGDVIARKCG
                     VPWLYRFELMGTQSDIENVRKGVTEFWQRQPQNA"
     gene            1329..3473
                     /gene="nrdE"
                     /locus_tag="JN001_003868"
     CDS             1329..3473
                     /gene="nrdE"
                     /locus_tag="JN001_003868"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit alpha"
                     /protein_id="HAY9054926.1"
                     /translation="MATTTAECLTQETMDYHALNAMLNLYDSAGRIQFDKDRQAVDAF
                     MATHVRPNSVTFSSQQQRLNWLVNEGYYDESVLNRYSRDFVITLFAYAHTSGFRFQTF
                     LGAWKFYTSYTLKTFDGKRYLEDFADRVTMVALTLAQGDATLALQLTDEMLSGRFQPA
                     TPTFLNCGKQQRGELVSCFLLRIEDNMESIGRAVNSALQLSKRGGGVAFLLSNLREAG
                     APIKRIENQSSGVIPVMKMLEDAFSYANQLGARQGAGAVYLHAHHPDILRFLDTKREN
                     ADEKIRIKTLSLGVVIPDITFHLAKENAQMALFSPYDVERVYGKPFADIAISEHYDEL
                     VADERIRKKYLNARDFFQRLAEIQFESGYPYIMYEDTVNRANPVAGRINMSNLCSEIL
                     QVNCASEYDENLDYARTGHDISCNLGSLNIAHTMDSPDFARTVETAVRGLTAVSDMSH
                     IRSVPSIEAGNAASHAIGLGQMNLHGYLAREGIAYGSPEALDFTNLYFYAITWHALRT
                     SMLLARERGETFAGFKQSRYASGEYFSQYLQGNWQPKTAKVGELFARSGITLPTREMW
                     AQLRDDVMRYGIYNQNLQAVPPTGSISYINHATSSIHPIVAKVEIRKEGKTGRVYYPA
                     PFMTNENLALYQDAYEIGAEKIIDTYAEATRHVDQGLSLTLFFPDTATTRDINKAQIY
                     AWRKGIKTLYYIRLRQMALEGTEIEGCVSCAL"
     gene            3483..4397
                     /gene="nrdF"
                     /locus_tag="JN001_003869"
     CDS             3483..4397
                     /gene="nrdF"
                     /locus_tag="JN001_003869"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000777980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1b ribonucleoside-diphosphate reductase
                     subunit beta"
                     /protein_id="HAY9054927.1"
                     /translation="MKLSRISAINWNKISDDKDLEVWNRLTSNFWLPEKVPLSNDIPA
                     WQTLTVVEQQLTMRVFTGLTLLDTLQNVIGAPSLMPYALTPHEEAVLSNISFMEAVHA
                     RSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKKIASVFLESF
                     LFYSGFWLPMYFSSRGKLTNTADLIRLIIRDEAVHGYYIGYKYQKNMEKISLGQREEL
                     KSFAFDLLLELYDNELQYSDELYAETPWADDVKAFLCYNANKALMNLGYEPLFPAEMA
                     EVNPAILAALSPNADENHDFFSGSRIGN"
BASE COUNT         1095 a         1131 c         1129 g         1074 t
ORIGIN      
        1 cgggcctacc ttacctgatt gcgcattcac aacgctttca gaaaagtcca taaagccgcg
       61 atgaacctca gttaagaaaa ttatggtcta cactgaaaat tacatcgaat tctaatgggg
      121 gatcatatgt ttaaccgacc gaaccgcaac gacgttgatg atggcgtgca ggatatccag
      181 aatgatgtca atcaattagc tgacagcctc gaatctgtat tgaagtcctg gggcagcgac
      241 gccaaagggg aagctgaagc cgcacgcagt aaagctcagg cgttgctgaa agaaaccagg
      301 gcgcgaatgc atggtcgtac tcgcgtccag caagccgcgc gcgatgccgt tggctgcgcg
      361 gattcttttg ttcgtgaaag accctggtgt agcgtgggta cagcagctgc ggtaggtatt
      421 tttatcggcg cactgttaag catgcgcaaa tcgtagtgca aaaatgataa taaatacgcg
      481 tctttgaccc cgaagcctgt cttcggggtt tctttttgcc tggtgaatca caaaaatccc
      541 cctcccccgt cacgctcata tccagggtaa tttcgatcac tatttgctat atattgtgta
      601 gttgaatctt ttttcaacta catctagtat ctctgtatca acagagagac aacccgacgc
      661 gtatcatcgc gccgtatctt cattttaaac ggaaatacga atcatgcgca taactattta
      721 cactcgtaac gattgcgttc agtgccacgc caccaaacgg gcgatggaaa accgggggtt
      781 tgattttgaa atgattaatg tcgatcgcgt tcctgaagca gcggaagcgt tgcgtgctca
      841 gggctttcgt cagttgccgg tagtgattgc tggcgatctt agctggtctg gtttccgtcc
      901 ggacatgatt aaccgtctgc atccagcgcc acacgcggcc agtgcatgag ccagctcgtc
      961 tacttctcca gcagctccga aaacacgcag cgttttatcg aacgtttagg tatgcccgcg
     1021 gtgcgcatcc cgctcaatga gcgggaacgg attcaggtag acgagcctta catcctgatc
     1081 gtgccctctt acggcggcgg cggtacggct ggcgcggtgc cacgacaggt aattcgcttt
     1141 ttaaacgacg agcacaaccg ggcgttgctt cgcggcgtta ttgcttctgg taatcgcaac
     1201 tttggtgagg cgtatggccg cgccggagat gtgattgccc ggaaatgcgg cgtgccgtgg
     1261 ctgtaccgtt ttgaactcat gggtacgcaa agcgatatcg aaaacgttcg taaaggagta
     1321 accgaatttt ggcaacgaca accgcagaat gcctgacgca ggaaacgatg gattaccacg
     1381 cgctgaatgc gatgcttaac ctctacgata gcgcaggtcg cattcagttc gataaagacc
     1441 gccaggccgt tgacgccttt atggcgacgc atgtgcgtcc gaacagtgtg accttcagta
     1501 gccagcagca gcgcctgaac tggctggtca acgaaggtta ctatgatgaa agcgttctta
     1561 atcgctactc tcgcgacttt gtcattacgc tgtttgccta cgcacacacc agcggttttc
     1621 gtttccagac attcctcggg gcatggaagt tttacaccag ctatacgttg aagacattcg
     1681 acggtaaacg ttatctggaa gattttgccg atcgagtcac gatggtggcg ctgacgctgg
     1741 cacaaggcga tgcgacgctg gcgttgcaac tgaccgatga aatgctgtca ggacgctttc
     1801 agccagccac tccgacattc ctcaactgcg gtaagcagca gcgcggcgaa ctggtttcct
     1861 gttttctgct gcgtattgaa gacaatatgg agtcgattgg ccgggcggta aattccgcac
     1921 tgcaactgtc gaaacgcggc ggcggcgtgg catttttgct gtcgaatctg cgagaagcgg
     1981 gcgcgccaat taaacgtatt gaaaatcaat cttctggcgt aattccggtg atgaaaatgc
     2041 tggaagacgc attttcctat gccaaccaac tcggcgcgcg tcagggggca ggtgcagtct
     2101 atttacatgc tcatcatccc gatattctgc gttttctcga tacaaaacgg gaaaatgccg
     2161 acgaaaaaat ccgcattaaa acactgtcgc tgggcgtggt gatcccggat atcactttcc
     2221 atctggcaaa agagaatgcg cagatggcac tgttttcgcc ctatgacgtt gagcgagttt
     2281 atggcaagcc gtttgccgat atcgccatca gcgaacacta tgacgaactg gttgccgatg
     2341 aacgcatccg caaaaaatac ctcaacgccc gtgatttctt ccagcggctg gcagaaatcc
     2401 agtttgagtc cggctatccc tacatcatgt atgaagacac ggtaaaccgt gctaaccctg
     2461 tcgccgggcg cataaatatg agtaatctct gctcagagat tttgcaggtc aactgtgcct
     2521 cagagtatga cgagaatctc gactatgccc gcacaggcca tgatatctcc tgcaatttag
     2581 gttcgttgaa tattgcgcac accatggatt cccccgattt tgcccgcacg gtagagactg
     2641 ccgtgcgcgg tttaacggcg gtgtcagata tgagtcatat ccgcagcgtg ccgtccatcg
     2701 aagccggaaa tgccgcctca cacgccatcg gactggggca gatgaattta cacggctatc
     2761 tggcgcgaga aggcatcgct tatggttcgc cggaagcact ggatttcacc aatctctatt
     2821 tctatgccat cacctggcac gcactgcgta cctcgatgtt gctggcgcgc gaacgcggtg
     2881 aaaccttcgc cgggttcaaa cagtcacgtt atgccagtgg tgaatatttt agccaatatc
     2941 tgcaaggtaa ctggcagccg aaaacggcga aagttggcga actgtttgcc cgcagcggta
     3001 ttacgttacc tacccgtgag atgtgggcgc aactgcgcga cgacgtgatg cgctacggca
     3061 tttataacca gaatcttcag gcggtgccgc caaccggttc tatctcttat atcaaccatg
     3121 ctacgtcgag tattcatccg attgtggcga aagtagagat acgcaaagag ggcaaaacag
     3181 gacgcgttta ctaccctgcc ccgtttatga ctaacgagaa tctggcgctg tatcaggatg
     3241 cttacgaaat cggcgcagaa aagatcatcg acacctacgc cgaagcgact cgccatgtcg
     3301 atcaggggct gtcgctgacg ctgtttttcc ccgataccgc caccactcgc gatatcaaca
     3361 aagcgcagat ttacgcctgg cgcaagggta tcaaaacgct ctattacatt cgcctgcgtc
     3421 agatggcgct ggaaggcact gaaattgaag gctgcgtctc ctgtgcactt taaggaatat
     3481 ctatgaaact ctcacgtatc agcgccatca actggaacaa gatatctgac gataaagatc
     3541 tggaggtgtg gaatcgcctg accagcaatt tctggctacc agaaaaggtg ccgctgtcga
     3601 acgatattcc tgcctggcag acattaactg tcgtagaaca acaactgacg atgcgcgttt
     3661 ttactggcct gacgctgctc gacacgctgc aaaatgttat cggcgcgcct tcgctgatgc
     3721 cctatgcact cacgcctcat gaagaagcgg tattatcgaa tatcagcttt atggaagcgg
     3781 ttcatgcccg ctcttacagt tcgattttct cgacgctgtg tcagaccaaa gatgtcgatg
     3841 ccgcctacgc ctggagtgaa gaaaacgcac cgttgcagcg aaaagctcag attattcagc
     3901 aacattatcg cggtgatgat ccgctgaaaa agaaaatcgc cagtgtgttt cttgaatctt
     3961 ttttgttcta ttccggtttc tggctgccga tgtatttttc cagccgcgga aagctgacca
     4021 ataccgcaga tctgatccgt ctgattatcc gcgatgaagc agtccacggt tactacatag
     4081 gctataaata tcagaaaaac atggaaaaga tatctctggg acaacgtgaa gagttgaaga
     4141 gtttcgcctt cgatttgttg ctggaactct acgacaacga gttgcaatac agcgatgagc
     4201 tgtacgccga aaccccgtgg gctgacgatg tgaaagcgtt tctctgttac aacgccaata
     4261 aggctttgat gaatctgggc tacgaaccgt tatttcccgc agaaatggcg gaagtgaatc
     4321 cggcaatcct cgccgcgctt tcgccgaatg ccgatgaaaa tcacgatttc ttttccggtt
     4381 cacgtatagg aaattgaaaa actaagcgat acccctgtcc gcgccttat
//
LOCUS       DADMJE010000222         4399 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.225, whole genome shotgun sequence.
ACCESSION   DADMJE010000222 DADMJE010000000
VERSION     DADMJE010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4399)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4399)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4399
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.225"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            225..597
                     /locus_tag="JN001_003870"
                     /pseudo
     CDS             225..597
                     /locus_tag="JN001_003870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611434.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JN001_003871"
     CDS             complement(1159..2106)
                     /gene="icsP"
                     /locus_tag="JN001_003871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858404.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="omptin family outer membrane protease IcsP"
                     /protein_id="HAY9054928.1"
                     /translation="MKLKFLVLALCVPAIFTTHATTNYPLFIPDNISTDISLGSLSGK
                     TKERVYHPKEGGRKISQLDWKYSNATIVRGGIDWKLIPKVSFGVSGWTTLGNQKASMV
                     DKDWNNSNTPQVWTDQSWHPNTHLRDANEFELNLKGWLLNNLDYRLGLIAGYQESRYS
                     FNAMGGSYIYSENGGNRNKKGAHPSGERTIGYKQLFKIPYIGLTANYRHENFEFGAEL
                     KYSGWVRSSDTDKHYQTETIFKDEIKNQNYCSVAANIGYYVTPSAKFYIEGSRNYISN
                     KKGDTSLYEQSTNISGTIKNSASIEYIGFLTSAGIKYIF"
     gene            complement(3487..3639)
                     /locus_tag="JN001_003872"
                     /pseudo
     CDS             complement(3487..3639)
                     /locus_tag="JN001_003872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477168.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            3695..4387
                     /gene="ospZ"
                     /locus_tag="JN001_003873"
     CDS             3695..4387
                     /gene="ospZ"
                     /locus_tag="JN001_003873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000625270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector cysteine
                     methyltransferase OspZ"
                     /protein_id="HAY9054929.1"
                     /translation="MISPIKNIKNVFPINTANTEYIVRNIYPRVEHGYFNESPNIYDK
                     KYISGITRSMAQLKIEEFINEKSRRLNYMKTMYSPCPEDFQPISRDEASIPEGSWLTV
                     ISGKRPMGQFSVDSLYHPDLHVLCELPEISCKIFPKENSDFLYIIVVFRNDSPQGELR
                     ANRFIELYDIKREIMQVLRDESPELKSIKSEIIIAREMGELFSYASEEIDSYIKQMND
                     RFSQIKARMSVT"
BASE COUNT         1351 a          862 c          849 g         1337 t
ORIGIN      
        1 gatctggttc aacaatatgc agatggtaca caacctcttt aaccagccca tccggattat
       61 tcagagccct tccgcaatcc ggaataaaag tgctgtttta ccgtgaaccc tctgaaaatc
      121 agcgagcagt gttttaacca gccgacgttc agagcgtact gacagacggt ggacaatttg
      181 aataaacagt tcaatcagac cgtagatgct ctcccgttgg cgacatgctg ggagcggtgg
      241 aacaccgctt cggcaacgag cttccggcgt ctccagtgaa gtgactgacg gataatggtt
      301 catgctaccg ggctaatgaa acacgccagt tcacccggat gttgggactt tgttgaaccg
      361 aagaacacgg cggtgcggag tccggagagt aacagaatag caaagagctt cgtgaaaaca
      421 ataaagtgtg actacatcag tatcatgccc aaacctgacg ggttaacggc agcaaagaac
      481 cttgcagagg cattcgagca ttataacgaa tggcatccgc atagtgcgct ggattatcgc
      541 tcgccacggg aatatctgcg gcagcgggcc aatgataaca ggtgtctgga aatatagggg
      601 caaagccacc cacgaacgat ccagcatata atcaagaaat tagatttcat ttaacataag
      661 atagattatg tgcaccaaga ggcatttcct taatttctga atttacaggc tcttttgctc
      721 tctttgctat gctgtggatt tggaaagata gagtgctggc tgattattta ggtattttca
      781 tcagcatgtc cctgatagca ctgttccatc agcgctttca ggcgataata gtagaccttg
      841 ggtagcctct gctcatgtgt aacttgatac cccgagaaca gccacgatgc tctaagcggt
      901 tcttatttct ccggtctcag ggtcggtaat gccaacagta agtccacagt aatcaacgaa
      961 gagttttttg aaccgccccg gaaatcctgg agactaaacg ccctgagaaa gaggtaaaca
     1021 gaatgactaa aaatacacgt ttttcccccg aagtccgtca acgggcagtt cgtatggttc
     1081 tggaaagtca gggcgaatat gactcacaat gggcggcaat ttttagccat gaaaacgtaa
     1141 tcaactcggt gaaccaattc aaaaaatata ctttatacct gcggaagtga gaaaaccaat
     1201 atattcaata cttgcactat ttttaatggt gccagatata ttggtacttt gctcataaag
     1261 agatgtatca ccttttttat tagaaatgta atttctggag ccttctatat aaaattttgc
     1321 actgggggtg acatagtatc caatattcgc agcaacagag cagtaatttt ggttttttat
     1381 ttcatcttta aaaattgtct cagtctgata gtgtttatct gtatcagatg aacgaaccca
     1441 accactatat ttcagttctg ctccaaactc aaaattctca tggcggtaat tagcagttaa
     1501 tccaatataa ggtattttga agagctgttt gtaacctatt gttctttcac cactaggatg
     1561 tgcccctttt ttattcctgt tccccccgtt ttcactataa atataactcc ctcccattgc
     1621 attaaaactg taacgactct cttggtaacc tgctattagt ccaagtcgat aatccaaatt
     1681 atttaataac caacctttaa gattcagctc gaattcgtta gcatcacgga gatgcgtatt
     1741 gggatgccag ctctggtcgg tccatacctg aggggtattg gaattgttcc agtctttatc
     1801 aaccatgctt gctttctggt tacctaaagt agtccaaccg gaaactccga aagacacttt
     1861 tggaattagc ttccaatcga tgccacctct aacaatagtc gcattactgt atttccagtc
     1921 cagttgacta atttttctcc ccccttcctt gggatgataa acgcgttctt ttgttttgcc
     1981 actcagagat cctagactaa tatccgtact gatgttatcc ggtatgaaaa gtggatagtt
     2041 agtggtagca tgtgtagtaa agatcgcagg tacacaaagt gcaagtacaa ggaattttaa
     2101 tttcatcgag aactctactt ttttggttga aatgtccatg atcttcttac tttataagat
     2161 aaacgtcaat gccaagcatt attttaatta aatatttgtt tatgttacca agaacatatc
     2221 ttttattata atatttattg aacttttgta aaaataaaaa aatacctcat tgtgcgaata
     2281 aagtaacggg ggccatagat ttctctacct accttttggt gttcatacct gaggctgata
     2341 gtttcaggat tccgcgacaa ttctactcac cttcttgttc tctcgccaat atgaaatcaa
     2401 tcagaaaagc gttccataag aacaacgata agacaataaa ttgtcatcac ggctgcaata
     2461 gccaacgtgc ctttcagtac caacatgaca acctcctgta tttgacgtaa cgtgtgctga
     2521 taaatatgta tttgtatctc aactgactca atacaacact taagtatagt ttttcagatt
     2581 ttgtttttcc cgtgaaatat tatggaaatg gcagaagcaa tacattgaat tccgattcga
     2641 gtgaatacgg ctagcgggca cctcacttta gcactgaagc catcaacttt tatttgactt
     2701 atttcaatgg aaagctttct cactatcagt acaggtaatt cccatccttt taaagtcgag
     2761 agtcagactg cgactaatac agttaaagtg accaaactca gttatcctct acacatttta
     2821 cctcatgttt acttggacaa ttcattggtg cttttataaa agaataaata ttctactaat
     2881 ttaatgcatc acctaaaata gtatttttta taatagaact gtatctatag tatattatta
     2941 aagcttaatt atttattatg ctttaatgtg gttgtccgat taaggactaa tccttgaaaa
     3001 cgccgtatag ggcgggagtt cactctattg cgataacgta accgtacaat attgtgcgtt
     3061 tcccaaattg accactactg aactattctg ggatttaaat gcaataaaat ggttggttga
     3121 aggtcgtggt gatgatgtta gtccttttga gaatattcca gtgccagatc ttacttataa
     3181 taaagaggct tggcagtttg gataagctat tgtccttatt ccactaatac aaactttttg
     3241 taaagtatat taaatatact tcatttcata ctgaaatccc cggaagtatt caatcaaaca
     3301 attacaccat aaaaggaaga gggagcccca attaagttat caagcatgtt tatgatacct
     3361 gcagggtata aattttctgg ctgcaagcag acacatataa aacgtcttta ttgatcctac
     3421 ccacataata tggacgcagt cgtaagtgag gctctgtgag cctacccacg taatatggac
     3481 acaggcctaa gcgaggttct ggttttcaaa ttgttccgga ctgaggccgc cacaccaacg
     3541 gtgccgtcgc cagcgattgt aatcgcactc gatataatta aacactgttg cccgcactat
     3601 ttcccgatag ataaagtgtt ctccgtggag acattccact taggaacaat tatattgttc
     3661 atggtaatgt ttatatttga gtatagagat taaaatgatt agtcccatca agaatattaa
     3721 gaacgtattt ccaataaata ctgcaaatac tgaatatata gtgagaaata tttatcctag
     3781 agttgaacat ggttacttta atgaatcacc aaacatatat gacaagaagt atatctctgg
     3841 tataaccaga agtatggcac aattaaaaat agaggagttt attaatgaga aatccagacg
     3901 acttaattat atgaagacaa tgtattctcc atgtccggaa gattttcagc ctatttccag
     3961 agacgaagcc agtataccgg aaggaagctg gttgacagtt atatctggaa aacgtcctat
     4021 ggggcaattt tctgtggata gtttgtacca tcctgactta catgtattat gtgagctccc
     4081 agagattagt tgtaagatct tccctaaaga aaatagtgat tttttgtata taattgttgt
     4141 attcagaaat gattctcccc aaggagaact acgggcaaat cggtttatag aactatatga
     4201 tataaaaaga gagattatgc aagtgttaag agatgagtcg ccagagttaa agtctattaa
     4261 atctgagatt attattgctc gtgaaatggg agaacttttt agttatgcat cagaggaaat
     4321 agatagctac ataaaacaaa tgaatgacag gttttctcaa atcaaggctc gaatgtctgt
     4381 tacttaatgt atattaatt
//
LOCUS       DADMJE010000223         4398 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.226, whole genome shotgun sequence.
ACCESSION   DADMJE010000223 DADMJE010000000
VERSION     DADMJE010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4398
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.226"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            3..368
                     /locus_tag="JN001_003874"
     CDS             3..368
                     /locus_tag="JN001_003874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000638214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054930.1"
                     /translation="MAEWPGEGGEGHLSSFFVQTDKASINVAYHHTVNQQKELGTFGA
                     FDHDWHTLAFKFKGSNSINVTPVLDGVDGQAFDLVKWANTANGLNRFVITDITGSAET
                     YPVLIDTVEVKANKAGAAA"
     gene            508..690
                     /locus_tag="JN001_003875"
     CDS             508..690
                     /locus_tag="JN001_003875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1378 family protein"
                     /protein_id="HAY9054931.1"
                     /translation="MTFIHQVMLYFCTAVCVLYLLSGGYRAVRDFWCRQIDKRAAEKI
                     SASQSAGSKPEEPVTP"
     gene            614..961
                     /locus_tag="JN001_003876"
     CDS             614..961
                     /locus_tag="JN001_003876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001427342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF826 domain-containing protein"
                     /protein_id="HAY9054932.1"
                     /translation="MIKGPLRKSAPVSQPEANPKNPLLLNNPFQRENPMSEITSLVTA
                     EAVKEVLRSEEVRSALKQKLRQNLESRLDAEVDAILDELLGVAAVPEPEGIAGDGSAS
                     DGGEPTPDSDMMM"
     gene            1038..1253
                     /locus_tag="JN001_003877"
     CDS             1038..1253
                     /locus_tag="JN001_003877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY9054933.1"
                     /translation="MYQMEKITTGVSYTTSAVGTGYWFLQLLDRFSPSQWAAIGVLGS
                     LLFGLLTYLTNLYFKIREDRRKAARGE"
     gene            1258..1602
                     /locus_tag="JN001_003878"
     CDS             1258..1602
                     /locus_tag="JN001_003878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdfR family protein"
                     /protein_id="HAY9054934.1"
                     /translation="MKKKYELVVKGINNYPNKITVTVALEIGGYPSLLLPDVAISLDR
                     TEDATLEFYEAEAKKQAKQFFMDVAAGLCEGDGPLPEKRPVILEAQDVLITYRGKLPG
                     IITGSLKTPPLA"
     gene            1653..2186
                     /locus_tag="JN001_003879"
     CDS             1653..2186
                     /locus_tag="JN001_003879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme"
                     /protein_id="HAY9054935.1"
                     /translation="MNTKIKYGLSAAVLALIAAGAPAPEILDQFLDEKEGNHTTAYRD
                     GAGIWTICRGAILVDSKPVVPGMKLSKEKCDQVNAIERDKALAWVERNIKVPLTEPQK
                     AGIASFCPYNIGPGKCFPSTFYRRINAGDRRGACEAIRWWIKDGGRDCRIRSNNCYGQ
                     VSRRDQESALACWDIDR"
     gene            2342..2524
                     /locus_tag="JN001_003880"
     CDS             2342..2524
                     /locus_tag="JN001_003880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310767.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054936.1"
                     /translation="MAKYKRILLRLTMKNGLELKAPVTDDISRALAFAIKWVAVGVAV
                     SPMLYGLAKLVIALKS"
     gene            2682..2856
                     /locus_tag="JN001_003881"
                     /pseudo
     CDS             2682..2856
                     /locus_tag="JN001_003881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001371701.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase"
     gene            3089..3313
                     /locus_tag="JN001_003882"
     CDS             3089..3313
                     /locus_tag="JN001_003882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054937.1"
                     /translation="MKKLLVTVKPFQGTIPFRILQRGRVLVEGSFSGKCTQLHSRTFQ
                     VNATNEELTVECTMNAAKCRMVSAALQPVC"
     gene            3658..3984
                     /locus_tag="JN001_003883"
     CDS             3658..3984
                     /locus_tag="JN001_003883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000828066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB family protein"
                     /protein_id="HAY9054938.1"
                     /translation="MKRNLPLIILLSSLVMGCTQHKTDMPRQLVKALPQYPAYAAANY
                     IKGRVDVKFDIGADGTVTRIEFIRSEPHHLFDEQVVKAMAKWRFEKDRPCKGVKKTFI
                     FSPSAP"
     gene            complement(4116..4316)
                     /locus_tag="JN001_003884"
     CDS             complement(4116..4316)
                     /locus_tag="JN001_003884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000095744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3950 domain-containing protein"
                     /protein_id="HAY9054939.1"
                     /translation="MSSKNRTRRTTTRNIRFPNQMIEQINIALDLKGSGNFSAWVIEA
                     CRRRLATDATHLRPASMKNNEK"
BASE COUNT         1124 a          938 c         1212 g         1124 t
ORIGIN      
        1 gaatagcgga atggccgggt gagggtggtg aaggccatct gagttctttc tttgtccaga
       61 cagataaagc cagtattaat gttgcatacc atcatacagt taatcaacaa aaagaacttg
      121 gcacgtttgg cgcattcgac catgactggc atacgcttgc atttaaattt aagggcagta
      181 acagcattaa tgttactccg gtgcttgatg gtgtggatgg acaggcgttt gacctggtga
      241 aatgggccaa tactgctaat ggactcaaca ggtttgtcat tacggatatt acaggtagtg
      301 cagaaaccta ccctgtactt attgatacgg tggaagttaa agcaaacaaa gctggagcag
      361 ccgcataatt gctaaaaaaa gccgccagcg gcaggaatgg aagctggcgg aggtaatccc
      421 aatggagaat gtaaagaaaa gatgctttcg tacattggtt ttttaaatga aaacaattct
      481 cattgtcaac cataacggta agaaattatg acatttattc atcaggtgat gctgtacttc
      541 tgtacggcgg tctgtgtgct gtatcttctt tcgggtgggt acagggctgt gcgcgatttc
      601 tggtgcaggc agattgataa aagggccgct gagaaaatca gcgccagtca gtcagccgga
      661 agcaaacccg aagaacccgt tactccttaa caaccccttt cagcgagaaa atcccatgtc
      721 agaaatcaca tccctggtca ctgcagaggc agtgaaggaa gtcctgcgct ctgaagaagt
      781 ccggagcgca ctgaaacaga aacttcgcca gaatcttgag tcgcgtcttg atgcagaagt
      841 ggatgccatt ctggatgagc tgctgggcgt agcagcggtt cctgagccgg aaggtatcgc
      901 gggtgacggg agtgcttcag atggcggtga acctacacct gacagcgaca tgatgatgta
      961 agcatgcgca agggaccatc ggtgtgtgcc ggtggtcttt atattgttgt gagcttccgg
     1021 attgcgggag acggggtatg taccagatgg aaaaaatcac aacaggtgtg tcatacacca
     1081 cgtcagcggt gggaacgggc tactggttcc tgcagttgct ggacaggttt tccccgtctc
     1141 agtgggcggc aataggcgtg ctggggagtc tgttgtttgg gctgctgaca tatctgacta
     1201 acctgtattt caaaatcaga gaggaccgtc gtaaggcggc gcggggagag taaagcgatg
     1261 aagaaaaaat acgaactggt tgttaaaggg ataaataatt acccgaataa gattactgtt
     1321 actgtggcac tggaaattgg tgggtatccg tcactgttgt tgccagatgt ggcgattagt
     1381 cttgaccgta ctgaagatgc cacgctggag ttttacgaag ctgaggcgaa aaagcaggcg
     1441 aagcagtttt tcatggatgt tgctgccggg ttatgtgaag gggatggtcc gttgccggaa
     1501 aagcgccccg taattttaga ggcgcaggat gtgttgataa cctacagagg aaaactaccg
     1561 ggaataatta ctggttctct gaagactcca ccgctggcct gaagacttaa catatccagg
     1621 gatttgaaat cgataaaccc tgataaatat ccatgaacac caaaatcaaa tacggcctgt
     1681 cggctgccgt tctggcgctg attgccgcag gtgcgcctgc gcctgaaatc ctcgaccagt
     1741 ttctggatga aaaggaaggt aaccacacca cggcataccg tgatggcgcg ggtatctgga
     1801 ccatctgccg cggtgccatc ctggtggata gtaaacctgt cgtcccgggc atgaagttgt
     1861 cgaaggaaaa atgcgaccag gtcaacgcca ttgagcgtga taaggcgctg gcatgggtgg
     1921 agcgcaatat taaagtgccg ctgaccgaac cccagaaagc gggtatcgcg tcattttgtc
     1981 cctataacat tggccccggt aagtgtttcc cgtcgacgtt ttacagacgg attaatgctg
     2041 gtgaccgcag gggagcatgc gaagcgattc gctggtggat taaggacggt ggcagagact
     2101 gccgtatccg ctcaaataat tgctacggtc aggtatcccg gcgagaccag gaaagtgcgc
     2161 tggcgtgctg ggacatcgac agataagcag aatattttgc tgaaaataag gcatgagcac
     2221 gcggacggat aacacgaaat cctgcgaact ggcgaaacgt aagtgaataa aagtaaaaac
     2281 cccgtttgtt ggcaccaggc ggggttttgt gtttctgacc ttgagtaagg caagggagaa
     2341 catggcgaag tataaacgaa ttctgttgag gttgaccatg aaaaacggcc ttgaactgaa
     2401 agcgcctgta actgatgaca tcagcagagc actggctttt gccattaagt gggtggcggt
     2461 cggtgttgct gtgtccccga tgctgtatgg gctggcaaaa ctggtcattg cgttgaaatc
     2521 gtgaagggag gattaagcat gtcagacaaa ctcataacgc tggcgaagat cctctgtgta
     2581 attgtcggca tttcattttc actaatgctg gttgctcttt ttctttccat ggcctggatg
     2641 atgttgtctt cgtcggggct gctggggtga acataaaccg aatgctttcc gcgtttaccg
     2701 ttattctgct ggtggtctgt ggtgcgctgt ggctggcaac agaccattac cgtgataacg
     2761 ccatcaccta caaagcgcag cgcgataaaa aagccagaga gctggagctg gcaaacgcaa
     2821 ccattactga catgcagcag cgccagcgtg atgttgccgc tggtcgtaag cgcctgcgga
     2881 tcaacgccac ctgctccggt accgtgcgtg aagccaccgg cacctccgga atggataatg
     2941 caaccggccc ccgactggca gacaccgctg aacgggatta tttcaccctc agagagcggt
     3001 tgatgacaat gcagaagcaa ctggaagggg cgcaggaata tatccgcact cagtgtatta
     3061 actagtattt ttgttatccg gagaatgcat gaagaaatta ctggtaaccg taaagccttt
     3121 tcagggaaca attccgttcc gtattttgca gcgtggtcgt gttcttgttg aaggttcgtt
     3181 cagtggtaaa tgtacgcaat tacactcccg gacctttcag gtgaatgcca cgaatgaaga
     3241 gctaaccgtt gagtgtacga tgaatgccgc taaatgccgc atggtatccg ctgcattaca
     3301 gccagtgtgt tgagcgacct tattaaccat gcgcggtatt gtcgccgtat ccccgcatta
     3361 acagagaccg cagcccgacc gggagactcc tctgcgcgag tgtgcgggga taatcaaaaa
     3421 cgatacacac cggggtttac cgcgttaacg gagcgcggcg ttgtcccctc atggtcgctg
     3481 gtccggtgcg atggtggaag aaaccggacg atgtgttacc tcgcaagctc tgttatgtca
     3541 tgtgtctgat ttgtgattta agtcggataa ttgtcgttgc cattaagcag aggattgatg
     3601 accgacaggg tggcattgtt agaataagac ttattcttat ctgtgccggg aatgaaaatg
     3661 aaaagaaacc ttccgttaat tattttgttg tcttctctgg ttatgggctg tacgcaacat
     3721 aaaacagata tgccccgaca gttggttaag gcattaccac aatatccggc ctatgcagcg
     3781 gcaaattata taaagggacg ggttgatgtg aagtttgata ttggtgctga tggtactgtc
     3841 acccgaattg agtttatccg ttcagagccg caccatttgt ttgatgagca ggttgtaaag
     3901 gcgatggcaa aatggcgatt tgagaaggac aggccgtgta aaggcgtgaa gaaaacgttt
     3961 atctttagtc cttctgcacc ctgattattt catcagaaat taattatcac tctgttgtta
     4021 ttctgtacat cccggcaggg taagtcttgt tccgtcggat atgaagatga aatattgttg
     4081 gaggacagtg ggtacctgct cctgtaaccg aacgttcatt tctcgttatt tttcatgctg
     4141 gccgggcgca gatgcgttgc atctgttgcc agccttctcc tgcaggcttc aataacccac
     4201 gctgaaaagt ttcctgaacc tttcagatca agagcgatgt taatttgttc aatcatctgg
     4261 tttggaaatc ggatgttgcg ggttgttgtt ctgcgggttc tgttctttga tgacataatg
     4321 tttccccata ttcagtgttg ctgatttgta ttatctgaag ttgcttttac gttaatttga
     4381 tgcagatcaa tcaatacg
//
LOCUS       DADMJE010000224         4379 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.227, whole genome shotgun sequence.
ACCESSION   DADMJE010000224 DADMJE010000000
VERSION     DADMJE010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4379
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.227"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(62..724)
                     /gene="exoX"
                     /locus_tag="JN001_003885"
     CDS             complement(62..724)
                     /gene="exoX"
                     /locus_tag="JN001_003885"
                     /EC_number="3.1.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease X"
                     /protein_id="HAY9054940.1"
                     /translation="MLRIIDTETCGLQGGIVEIASVDVIDGKIVNPMSHLVRPDRPIS
                     PQAMAIHRITEAMVADKPWIEDVIPHYYGSEWYVAHNASFDRRVLPEMPGEWICTMKL
                     ARRLWPGIKYSNMALYKTRKLNVQTPPGLHHHRALYDCYITAALLIDIMNTSGWTAEQ
                     MADITGRPSLMTTFTFGKYRGKAVSDVAERDPGYLRWSFNNLDSMSPELRLTLKHYLE
                     NT"
     gene            complement(748..1404)
                     /locus_tag="JN001_003886"
     CDS             complement(748..1404)
                     /locus_tag="JN001_003886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HAY9054941.1"
                     /translation="MSFWKVAAAQYEPRKTSLTEQVAHHLEFVRAAARQQCQLLVFPS
                     LSLLACDYSRRALPAPPDLSLLDPLCYAATTWRMTIIAGLPVEYNDRFIRGIAVFAPW
                     RKTPGIYHQSHGACLGRRSRTITVVDEQPQGMDMDPTCSLFTTGQCLGEPDLLASARR
                     LQFFSHQYSIAVLMANARGNSALWDEYGRLIVRADRGSLLLVGQRSSQGWQGDIIPLR
                     "
     gene            complement(1506..1736)
                     /locus_tag="JN001_003887"
     CDS             complement(1506..1736)
                     /locus_tag="JN001_003887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit theta"
                     /protein_id="HAY9054942.1"
                     /translation="MLKNLAKLDQTEMDKVNVDLAAAGVAFKERYNMPVIAEAVEREQ
                     PEHLRSWFRERLIAHRLASVKLSRLPYEPKLK"
     gene            1875..2249
                     /gene="yobA"
                     /locus_tag="JN001_003888"
     CDS             1875..2249
                     /gene="yobA"
                     /locus_tag="JN001_003888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopC domain-containing protein YobA"
                     /protein_id="HAY9054943.1"
                     /translation="MASTARSLRYALAILTTSLVTPSVWAHAHLTHQYPAANAQVTAA
                     PQAITLNFSEGVETGFSGAKITGPKNENIKTLPAKRNEQDQKQLIVPLADSLKPGTYT
                     VDWHVVSVDGHKTKGHYTFSVK"
     gene            2253..3120
                     /gene="copD"
                     /locus_tag="JN001_003889"
                     /pseudo
     CDS             2253..3120
                     /gene="copD"
                     /locus_tag="JN001_003889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416354.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis membrane protein CopD"
     gene            3133..3474
                     /locus_tag="JN001_003890"
     CDS             3133..3474
                     /locus_tag="JN001_003890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebY family protein"
                     /protein_id="HAY9054944.1"
                     /translation="MMKKSILAFLLLTSSAAALAAPQVITVSRFEVGKDKWAFNREEV
                     MLTCRPGNALYVINPSTLVQYPLNDIAQKEVASGKTNAQPISVIQIDDPNNPGEKMSL
                     APFIERAEKLC"
     gene            complement(3856..4326)
                     /locus_tag="JN001_003891"
     CDS             complement(3856..4326)
                     /locus_tag="JN001_003891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001212336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9054945.1"
                     /translation="MDLALVTGQRREDITNMRFSDIYDDRLHIRQIKTGMMIAIPLSL
                     SLPVAGLRLGAVVEQCRMVSRGDYLISAGIRKNSPDGSIHPDGLTKKFVAARKLTGIQ
                     FSENPPTFHEVRSLAGRLYKETCGEEFAQRLLGHTSEKTTKMYLDEREKTYLLL"
BASE COUNT         1090 a         1057 c         1079 g         1153 t
ORIGIN      
        1 cgatggaata tgcttttctg gtcgcgctgg cgcagggaac attacccgct acgcctgcgg
       61 attaagtatt ttccagataa tgtttcagtg ttaaacgcag ctccgggctc atgctgtcca
      121 ggttattaaa tgaccagcgc agatagcccg gatcgcgttc ggcaacgtcg gaaaccgctt
      181 tgccacggta tttgccaaag gtgaaggtcg tcatcaacga cggacgtccg gtgatatcgg
      241 ccatctgttc tgccgtccag ccggaggtgt tcataatatc gataagcaac gcggcggtga
      301 tataacagtc atacaacgcg cggtgatgat gcaggcccgg cggcgtctgt acattgagct
      361 tccgtgtttt atataacgcc atattgctgt acttgatccc tggccacaaa cgacgggcca
      421 gtttcatagt gcaaatccac tcaccgggca tctcaggcag tacgcggcgg tcaaagctgg
      481 cgttgtgcgc gacataccat tcactaccgt aatagtgtgg gatcacatct tcaatccacg
      541 gtttatcggc gaccatggct tcggtgatgc gatgaatcgc catcgcttgt ggactaatag
      601 gacgatcggg gcgcaccagg tggctcatgg ggttgacgat ttttccgtca atgacatcaa
      661 cagaggcaat ctcaacgatc cctccctgca aaccgcaggt ttctgtatcg ataatgcgca
      721 acatggcatg ctccaggccg aaaaagccta gcgtaatgga atgatatcgc cttgccaacc
      781 ctgtgatgaa cgctgaccga ctaacaataa tgaaccacga tcggcgcgaa cgatgagacg
      841 accatattca tcccatagtg cactgttacc acgggcattt gccatcagca cggcaatcga
      901 gtactgatgt gaaaaaaatt gtaagcgacg ggccgacgcc agcaggtcgg gttctcccag
      961 acattgccct gtagtaaaca gtgaacaggt cgggtccata tccatacctt gcggttgttc
     1021 atcgaccacc gtgatggttc tggaacgacg gcccagacat gcaccatgac tctgatggta
     1081 gatcccaggc gtttttcgcc acggtgcgaa caccgcaatt ccacgaataa agcgatcgtt
     1141 atattcaacg ggaaggccgg caatgatggt cattcgccag gtcgttgcgg cataacaaag
     1201 cgggtctaac agtgagagat cgggtggggc aggaagggca cgtcgcgaat aatcacacgc
     1261 cagtaaagaa agcgatggaa aaactaacag ctgacattgt tgcctggcgg cggccctcac
     1321 aaactccaga tgatgagcta cctgttcggt gagtgaggtt ttacgaggct catattgcgc
     1381 tgctgcaact ttccagaacg acataatgac ttccttttca aaatgactgc aaattatggg
     1441 tgcggtttag aaaatactca taatttagca ggcgttatgt aagaaagtgt aactctgtat
     1501 aagttttatt taagtttggg ctcgtaaggt aaacgtgaca gtttgaccga agccaaacgg
     1561 tgggcaataa gcctctcgcg aaaccagctg cgcaaatgtt caggctgttc acgttcaacc
     1621 gcttcagcga tcaccggcat attgtagcgt tctttaaatg ccaccccggc cgccgccaaa
     1681 tcgacattca ctttatccat ttctgtttga tccagtttag ccagattctt cagcattctt
     1741 aatctcctca tcattcgcgg gcaaaagtta ctaagagtga gccaggatgg caagccggaa
     1801 ttgatgatcc tcgactcaga cattagacaa ggttatgctc tgtaaaaaag ttattacaaa
     1861 aagtaataga taatatggct tcaactgcac gctcccttcg ctacgcgctg gcaatcctga
     1921 ccacttcgtt ggtgacacct tccgtctggg cacatgcgca tttaacgcat cagtatcctg
     1981 cggcaaacgc gcaagtgaca gctgcaccgc aggcaatcac tttaaacttc tcggaaggtg
     2041 ttgaaacagg attcagtggt gcaaaaatca cggggccaaa aaacgaaaat attaaaacat
     2101 taccggcgaa gcgaaatgag caggaccaaa agcaactgat tgttccactg gccgattcgc
     2161 tgaaacccgg aacctacacc gttgactggc atgttgtttc ggtggacggg cataaaacga
     2221 aaggacacta cacctttagc gtgaaataaa tcatgctggc gtttacctgg atcgcgctgc
     2281 gatttatcca tttcacctcg ctgatgctgg tttttggctt cgcaatgtac ggtgcctggc
     2341 tggccccctt gacgattcgt cgcttgctgg cgaagcgttt tctgcgttta caacagcacg
     2401 ctgccgtctg gagtttgatc agtgccactg caatgctcgc cgttcagggc gggttgatgg
     2461 gaacgggatg gacagatgta ttttcgccaa acatttggca ggctgttttg caaacgcagt
     2521 ttggtggcgt ctggttatgg caaattgttc tcgccctcgt aacgttgcgc ccttatgcaa
     2581 ccgcggaata tgccacgttt gctgtttatg ctcactaccg cgcaatttat tctgctggcg
     2641 ggagtggggc atgcgacgct gaatgaaggg gtaacggcga aaatccatca gactaatcac
     2701 acgattcacc tgatttgtgc ggcggcgtgg tttgggggat tactgccggt gctctggtgt
     2761 atgcaactca tcaaaggccg ttggcgacac caggctattc aggcgctgat gcgtttttca
     2821 tggtgcgggc attttgcggt gatcggcgta ctggcaagcg gggtgcttag tgcattgttg
     2881 attaccggat ttccccccac gcttacgact tactggggcc aactcttatt gctcaaagcc
     2941 atcctggtga tgattatggt ggtcattgcg ctggctaatc gttatgttct tgtaccgcgc
     3001 atgaggcagg atgaagatcg tgcggcaccc tggtttgtgt ggatgactaa actcgaatgg
     3061 gcgataggtg cggtagtgct ggtgatcatc agcctgcttg cgactctcga acctttttga
     3121 tggattacga aaatgatgaa aaaaagtatt ctggcgtttc tgttactcac cagttctgca
     3181 gcggcgctgg ctgcaccgca ggtgattacc gtcagtcgtt ttgaagtggg taaagacaaa
     3241 tgggcgttta atcgcgaaga ggtgatgctg acttgccgac cgggtaatgc tttgtatgtt
     3301 attaatccga gtaccctcgt gcagtatcct ttaaacgata tcgcacaaaa ggaagttgcc
     3361 agtgggaaga ccaatgccca acccatttcg gtgattcaga ttgatgatcc taacaatccc
     3421 ggcgaaaaaa tgagtctggc accgtttata gaacgagctg aaaaactctg ttaattacct
     3481 aaaatagcct tttgatttcc aataaaaaaa ccgcctcagt tctttcacca gaacgggcgg
     3541 ttttaacatt tcagctgatg accaccacgc tttttattga ccattttgca cgcaaactgg
     3601 aaaacctggc gtcgtcatct attcttaaag ggcaaggcaa ctaagcctgc attaatgcca
     3661 acttttagcg cacggctctc tcccaagagc catttccctg gaccgaatac aggaatcgta
     3721 ttcggtcttt ttttaattgc atttaaaatc aattagttgc aaatgtctcc ccgaaattta
     3781 ctcgaatttc tgtattccgg tcttttttgg ttatatcaca accaaaatac atttaacaat
     3841 ccatttacgt taaaatcaga gcagtaagta cgttttttct ctctcatcaa gatacatttt
     3901 tgttgtcttc tccgatgtgt ggccaagtag acgctgagca aattcttctc cacatgtttc
     3961 tttgtacaat cgtccagcca ggcttctgac ttcgtgaaaa gttggtgggt tttcactgaa
     4021 ctggatacct gttaattttc tggctgcgac aaatttcttt gtcaggccgt ccgggtgaat
     4081 gctgccgtca gggctgtttt ttctaatccc ggcactgatt agataatccc ccctacttac
     4141 catgcggcac tgttcaacta ctgcaccaag tcgtaaacca gcgacaggaa ggctgagtga
     4201 cagggggata gcaatcatca ttcctgtctt aatttgcctg atgtggagac gatcatcata
     4261 aatatcactg aaccgcatat tcgttatgtc ttcgcgacgt tgtcctgtta caagggctaa
     4321 atccatagct aatgggaacc atgccggaag ttgatctgct gcctccctga tgcagttgt
//
LOCUS       DADMJE010000225         4348 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.228, whole genome shotgun sequence.
ACCESSION   DADMJE010000225 DADMJE010000000
VERSION     DADMJE010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4348
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.228"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            142..2139
                     /locus_tag="JN001_003892"
     CDS             142..2139
                     /locus_tag="JN001_003892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family transporter"
                     /protein_id="HAY9054946.1"
                     /translation="MSENDTIPKKSTSQINKAVFFTSALLIFLLVAFAAVFPDVADKN
                     FKLLQQQIFTNASWFYILAVALILLSVTFLGLSRYGDIKLGPDHAQPDFSYHSWFAML
                     FSAGMGIGLMFFGVAEPVMHYLSPPVGTPETVAAAKEAMRLTFFHWGLHAWAIYAIVA
                     LILAFFSYRHGLPLTLRSALYPIIGDRIYGPVGHAVDIFAVIGTVFGVATSLGYGVLQ
                     VNAGLNHLFGVPINETVQVILIVVITGLATISVVSGLDKGIRILSELNLGLALLLLAL
                     VLCLGPTVLLLKSFVENTGGYLSELVSKTFNLYAYEPKSSNWLGGWTLLYWGWWLSWS
                     PFVGMFIARVSRGRTIREFVTGVLFVPAGFTLMWMTVFGNSAIYLIMNQGATDLANTV
                     QQDVALALFNFLEHFPFSSVLSFIAMAMVIVFFVTSADSGAMVVDTLASGGVANTPVW
                     QRIFWASLMGIVAIALLLAGGLSALQTVTIASALPFSVILLISIYGLLKALRRDLTKR
                     ESLSMATIAPTAARNPIPWQRRLRNIAYLPKRSLVKRFMDDVIQPAMTLVQEELNKQG
                     TISHISDAVDDRIRLEVDLGNELNFIYEVRLRGYISPTFALAAMDNDEQQTEQHRYYR
                     AEVYLKEGGQNYDVMGWNQEQLINDILDQYEKHLHFLHLVR"
     gene            2202..3572
                     /locus_tag="JN001_003893"
     CDS             2202..3572
                     /locus_tag="JN001_003893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2254 domain-containing protein"
                     /protein_id="HAY9054947.1"
                     /translation="MISRWKWMLKQTIKKLWFRATLFAIVAIITALLSILFKSMIPES
                     VSVKVGAEAVDNILNILASSMLAVTTFSLSIMVTAYGSATTNVTPRATRLVVEDVTTQ
                     NVLATFIGSFLFSLVGIIALNMGAYGERGRVILFIVTLVVIALILITLLRWIQHLTSL
                     GRVGETTAQVEQAAIETFIARARNPCLGGYPWLENNEQPKGTVAVYPKKIGYVEYIDM
                     VKLSKLLTNDPRHVYLVAQPGSFIHPSMPVLYLSQGQESSINTDLLETIIVSDARSFA
                     QDPRFCLSVMAEIACRALSPAVNDPGTAIDVIGRGVRILSTYAQNKSDEIEVKYPSVH
                     VAPLQNNDLLEDFFSPVARDGASMREIQIRVLKGLSMLSKGWPEIFAEAAHTLAFETL
                     EHATRADHIDSDRYLIKSTYYNLFSGEYSNKKNSCRASNSVVGKSRAKHSRENGRMLC
                     AKSKRC"
     gene            complement(3929..4348)
                     /locus_tag="JN001_003894"
                     /pseudo
     CDS             complement(3929..4348)
                     /locus_tag="JN001_003894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
BASE COUNT         1049 a         1006 c         1095 g         1198 t
ORIGIN      
        1 tggtagtgtc cgctattgcc agtacacctc aacattccac catgcattcc gattaacgcc
       61 gcatagccag ttgaactttg ctactttgtg agaggtagta ccttctatcc agtgcgaatt
      121 taattaatgg aataaatgat tatgagtgaa aatgatacaa tcccaaagaa gtctacaagt
      181 cagattaaca aagcggtatt ctttacatct gctttgctaa ttttccttct tgtcgccttt
      241 gccgccgtat tcccggatgt cgccgacaaa aattttaaac tacttcagca acaaatcttc
      301 acgaatgcca gctggttcta catccttgct gtggccctga ttttactgag tgtcacgttc
      361 cttggactct cacgctacgg tgatatcaag ctgggcccgg accatgcgca gcctgatttc
      421 agctaccact cctggtttgc gatgcttttt tcggcaggga tggggatcgg cctgatgttc
      481 tttggcgttg ccgaacctgt aatgcattat ctttcgccac ccgttggcac tccagaaacc
      541 gttgcggcag ctaaggaagc aatgcgtctg acctttttcc actggggact gcacgcatgg
      601 gcaatttatg ccattgtggc gctgattctg gcgttcttca gttaccgtca cggtctgcct
      661 ttaactctgc gctccgcact ctatcccatt attggcgatc gcatatacgg acctgtagga
      721 catgcggttg atattttcgc tgttataggc acggtctttg gcgttgcgac atcactgggt
      781 tacggtgttt tgcaggtgaa tgccggtttg aaccatcttt tcggggtgcc catcaatgaa
      841 acggtgcagg taattctgat cgtggtcatc acggggttag cgacgatttc agtggtgtcc
      901 ggtctggata agggaatacg tatcctgtct gaactcaatc tgggtctggc tttgttgctc
      961 ctggcgctgg tcctgtgtct gggaccaacc gtgcttctgc tgaagtcatt tgtggaaaat
     1021 acgggcggtt atctttcgga actggtgagt aaaacgttca acctttacgc gtatgagccc
     1081 aagtcgagca actggctggg gggctggaca ttactgtact ggggatggtg gctttcatgg
     1141 tcgccgtttg tggggatgtt catcgcacgg gtctcccgcg ggcgaaccat tcgcgagttt
     1201 gtcaccggcg tgctgtttgt tcccgcgggt tttacgctaa tgtggatgac ggtgtttggt
     1261 aacagcgcga tctatctcat tatgaaccag ggggccacag acctcgccaa tactgttcag
     1321 caggatgtgg cgctggccct gtttaatttc ctggagcatt tcccgttctc ttctgtgctg
     1381 tcattcattg caatggcgat ggtcatcgtc ttctttgtaa cgtctgctga ttcgggggca
     1441 atggttgtgg atactctggc atcaggtgga gtggcaaaca cacccgtctg gcagcgaata
     1501 ttctgggcct cgctcatggg cattgttgca attgcgcttc tccttgccgg agggctaagt
     1561 gcgctgcaaa cggtgacaat agcgagtgca ttgcccttct cagtgatctt actaatatct
     1621 atatacggac ttttaaaagc tttgcgccgg gatttgacca agcgtgaaag cctgagcatg
     1681 gcgacaattg ctcctacggc tgcacgtaac ccaattcctt ggcagagaag gttacgcaat
     1741 atcgcgtatc tgccgaagcg atctcttgtg aaacgtttta tggacgacgt tatccagccc
     1801 gccatgacgc tggttcagga ggaactgaac aagcagggga cgataagcca cattagtgat
     1861 gcagtcgacg atcgtattcg tcttgaagtc gatttgggca acgagctgaa ttttatatat
     1921 gaagtgaggc ttcgcgggta tatctcaccg accttcgcgc tcgccgcaat ggataatgat
     1981 gagcagcaga ctgaacaaca tcgatattat cgcgctgagg tttatctcaa agaaggcggt
     2041 caaaattatg atgtgatggg ctggaaccag gaacagctga ttaatgacat actggaccag
     2101 tacgaaaaac acctgcactt cctgcacctg gttcgttaat agcaacatgc cgtcctgggg
     2161 gcggcaatta ttatcccggc cgcaatatga gggaatgcag aatgatttca cgctggaaat
     2221 ggatgctgaa gcagacaatt aaaaaactat ggttcagggc aacgttattc gcaattgtcg
     2281 cgataataac ggccctttta tcaattcttt ttaaatcaat gatacctgag tcggtttccg
     2341 tgaaggttgg tgcggaagca gtcgataaca ttctgaacat actggcatcg agtatgctgg
     2401 cagtgaccac attttcgctg agtatcatgg tcacagccta cggttcagcc actactaatg
     2461 tgactcccag agctacgcgt ttagttgttg aagacgtcac cacacaaaat gtactggcca
     2521 ccttcatcgg ttcttttctc ttcagtctgg tagggattat tgccctcaat atgggagctt
     2581 atggagaaag ggggagagtc attttattca ttgtcacact ggttgtcatt gccttaatcc
     2641 tcatcacatt gcttcgctgg atacagcatt tgacctctct ggggagggtt ggtgagacaa
     2701 cggcacaagt agaacaggcg gccatcgaaa catttattgc gagagcaaga aatccctgtc
     2761 tcggcggata tccatggctt gagaacaatg aacagccgaa aggaacggtt gcagtttatc
     2821 cgaagaagat tggctatgtt gaatatattg atatggtgaa acttagcaag ctgctgacca
     2881 atgatccccg tcatgtatac ctcgtggcgc agccaggcag tttcatacat ccgtccatgc
     2941 cagttttgta cctgagtcag ggccaggagt cgtcaatcaa caccgattta cttgagacga
     3001 ttattgtctc ggatgcacgt tcatttgctc aggatcctcg attttgtctt agcgtcatgg
     3061 ccgaaatagc ctgccgggcc ctttcccctg cagtgaacga tcctggaacc gccattgatg
     3121 tcattggcag aggtgttcgt atactttcca cttacgcgca gaataaatct gatgaaatag
     3181 aagtgaaata tccttcagta catgttgcac cacttcagaa taacgatcta ctggaagact
     3241 ttttctcacc tgtcgcgcgc gatggtgcca gtatgaggga gattcagata agagtcctta
     3301 aaggactgtc gatgctgagt aaaggttggc ctgagatatt tgctgaagcc gcacataccc
     3361 tggcatttga aacattagag catgcaactc gtgctgacca tatagattct gatagatatc
     3421 taataaaatc aacttattat aatttattta gtggcgaata ttctaataaa aaaaatagct
     3481 gcagagcaag caattcggtt gttggcaagt caagggcaaa gcattcgcgt gagaatgggc
     3541 gtatgctttg tgccaaaagc aaacgttgct aattctgcac tgttcagcga tggcgcagta
     3601 gcgacaggca ctgccactgt ccagtcggca aaagcgaaca ctttgccact gcggggataa
     3661 actgattgaa gctctcgcgc aaaatcactt attcttttga caataaaatg taggagatgg
     3721 gtcatgacag gcgaaaatcg tggccgggga aggccgcgaa agacagaaag tacctatgca
     3781 gatactcgta atgatctgat ccgcagtggc cttgaactgc tgacgcagaa tggttttctt
     3841 gcgacgggag tcgatgccat tgtgtcaacg acggatgaaa agtgatccac ttatatctcc
     3901 accaacggcc caatattgat ccaccgtttt actcaggatt agcttcagct ataaccccgg
     3961 cctttcgttt ctgtctgagt cgatagcttt ctcctttgat ttgaacgaca tgtgagtggt
     4021 gtaagatacg gtccagcatc gctgaggtca gtgctgcatc accggcgaac gtttgatccc
     4081 actgcccgaa cggcagattg gatgtcagga tcattgcgct cttttcgtaa cgtttagcga
     4141 tgacctagaa gaacagtttt gcttcttcct gactgaacgg cagatagcct atttcatcaa
     4201 tgatgagcag gcagggggcc attactccac gctgaagcgt cgttttataa cggccctgac
     4261 gttgtgccgt agataactga agtaacagat ctgctgctgt tgtgaagcga accttgatac
     4321 ctgcacggac tgcttcatag cccatcgc
//
LOCUS       DADMJE010000226         4320 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.229, whole genome shotgun sequence.
ACCESSION   DADMJE010000226 DADMJE010000000
VERSION     DADMJE010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4320)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4320)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4320
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.229"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..976)
                     /locus_tag="JN001_003895"
     CDS             complement(<1..976)
                     /locus_tag="JN001_003895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418298.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF945 family protein"
                     /protein_id="HAY9054948.1"
                     /translation="MIRKSATGVIVALAVIWGGGIWYTGTQIQPGVEKFIKDFNDAKK
                     KGEHAYDMTLSYKNFDKGFFNSHFQMQISFDNGAPDLNIKPGQKVAFDVDVEHGPLPI
                     TMLMHGNVIPALAAAKVNLVNNELTQPLFIAAKNKSPVEATLRFAFGGSFSTTLDVAP
                     AEYGKFSFGEGQFTFNGDGSSLSNLDIEGKVEDIVLQLSPMNKVTAKSFTIDSLTRLE
                     EKKFPVGESESKFNQVNIINQGEDVAQIDAFVAKTRLDRVKDKDYINVNLTYELDKLT
                     KGNQQLGSGEWSLIAESIDPSAVRQFIIQYNIAMQKQLAAHPELANDEV"
     gene            complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JN001_003896"
     CDS             complement(1131..1757)
                     /gene="dsbA"
                     /locus_tag="JN001_003896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol:disulfide interchange protein DsbA"
                     /protein_id="HAY9054949.1"
                     /translation="MKKIWLALAGLVLAFSASAAQYEDGKQYTTLEKPVAGAPQVLEF
                     FSFFCPHCYQFEEVLHISDNVKKKLPEGVKMTKYHVNFMGGDLGKDLTQAWAVAMALG
                     VEDKVTVPLFEGVQKTQTIRSASDIRDVFINAGIKGEEYDAAWNSFVVKSLVAQQEKA
                     AADVQLRGVPAMFVNGKYQLNPQGMDTSNMDVFVQQYADTVKYLSEKK"
     gene            complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JN001_003897"
     CDS             complement(1774..2760)
                     /gene="srkA"
                     /locus_tag="JN001_003897"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response kinase SrkA"
                     /protein_id="HAY9054950.1"
                     /translation="MNNSAFTFQTLHPDTIMDALFEQGIRVDSGLTPLNSYENRVYQF
                     QDEDRRRIVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFY
                     FAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLF
                     EDATLIPSGLKAAFLKATDELIAAVTAHWREDSTVLRLHGDCHAGNILWRDGPMFVDL
                     DDARNGPAIQDLWMLLNGDKAEQRMQLETIIEAYEEFSEFDTAEIGLIEPLRAMRLVY
                     YLAWLMRRWADPAFPKNFPWLTGEDYWLRQTATFIEQAKVLQEPPLQLTPMY"
     gene            complement(2837..3106)
                     /locus_tag="JN001_003898"
     CDS             complement(2837..3106)
                     /locus_tag="JN001_003898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihD family protein"
                     /protein_id="HAY9054951.1"
                     /translation="MKCKRLNEVIEFLQPAWQKEPDLNLLQFLQKLAKESGFDGELAD
                     LTDDILIYHLKMRDSAKDAVIPGLQKDYEEDFKTALLRARGVIKE"
     gene            3176..3760
                     /gene="mobA"
                     /locus_tag="JN001_003899"
     CDS             3176..3760
                     /gene="mobA"
                     /locus_tag="JN001_003899"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HAY9054952.1"
                     /translation="MNLMTTITGVVLAGGKARRMGGVDKGLLELNGKPLWQHVADALM
                     TQLSHVVVNANRHQEIYQASGLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFCPCDT
                     PYIPPDLAARLNHQRKDAPVVWVHDGERDHPTIALVNRAIEPLLLEYLQAGERRVMAF
                     MRLAGGHAVDFSDHKDAFVNVNTPEELARWQEKR"
     gene            3742..4269
                     /gene="mobB"
                     /locus_tag="JN001_003900"
     CDS             3742..4269
                     /gene="mobB"
                     /locus_tag="JN001_003900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418293.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HAY9054953.1"
                     /translation="MAGKTMIPLLAFAAWSGTGKTTLLKKLIPALCARGIRPGLIKHT
                     HHDMDVDKPGKDSYELRKAGAAQTIVASQQRWALMTETPDEEELDLQFLASRMDTSKL
                     DLILVEGFKHEEIAKIVLFRDGARHRPEELVIDRHVIAVASDVPLNLDVALLDINDVE
                     GLADFVVEWMQKQNG"
BASE COUNT         1169 a         1021 c          966 g         1164 t
ORIGIN      
        1 caacttcatc gtttgctaac tcagggtgtg cagcaagctg cttctgcatc gcaatgttat
       61 actggatgat aaattggcgc actgctgagg gatcaataga ttcagcaatc aatgaccact
      121 caccactacc gagttgctga ttcccttttg ttaacttatc aagttcgtag gtcagattga
      181 cattgatata atctttgtct ttaacgcgat ccagcctggt ttttgcaacg aaagcatcga
      241 tttgggcaac gtcttccccc tgattgataa tattaacctg attaaatttc gactcgcttt
      301 caccaaccgg aaatttcttt tcttctaatc gtgtcagaga atcaatggta aaactttttg
      361 ccgttacttt gttcattggt gataattgca gaacaatatc ttcgactttg ccttcaatat
      421 ccaggttaga caatgaacta ccatcaccat taaaagtaaa ctggccctca ccaaaagaaa
      481 actttccata ctctgcaggg gcaacatcta atgtcgtaga gaatgagcca ccaaacgcga
      541 atcgcaatgt cgcttccacg ggcgatttat ttttcgcggc gataaatagc ggttgtgtca
      601 gttcattatt cactaagttc acttttgccg ctgccagtgc tgggatgaca ttaccatgca
      661 ttaacattgt gatgggcaac ggaccgtgct caacatccac atcaaatgca actttctggc
      721 ctggcttgat attgagatcg ggtgcaccgt tatcaaatga aatttgcatt tgaaaatggg
      781 aattaaaaaa gcctttgtca aagtttttat aacttaacgt catatcgtag gcatgttcac
      841 ctttcttttt agcatcgtta aaatctttaa taaatttttc gacaccaggc tgaatttgcg
      901 tacctgtgta ccatatgcca ccaccccaga ttacggctaa cgcaacaata acacctgtag
      961 ctgacttacg tatcatataa atattccctg ataaaacagc aaaactttga atatccactt
     1021 atgctgaaat aatgtccagc ggcaggatgt attatcagaa tgtatttata tttattaaat
     1081 aataaaaaaa gcccgtgaat attcacgggc tttatgtaat ttacattgaa ttattttttc
     1141 tcggacagat atttcactgt atcagcatac tgctgaacaa aaacatccat attgctggta
     1201 tccataccct gcggattcag ctgatattta ccgttaacaa acatcgccgg aacaccgcgc
     1261 aattgcacgt cagctgcagc tttttcctgc tgagctacca gagatttcac cacgaagctg
     1321 ttccacgccg cgtcgtactc ttcaccttta atacctgcgt tgataaatac atcgcggata
     1381 tcagaagcag aacgaatggt ctgggttttc tgtacgcctt caaacagcgg aacagtcact
     1441 ttgtcttcca cgcccagcgc catcgccaca gcccatgcct gagtcagatc tttgcccagg
     1501 tcaccaccca tgaagttgac gtggtattta gtcatcttca cgccttccgg cagttttttc
     1561 ttcacattat cagaaatatg cagaacttct tcaaactgat agcagtgcgg acagaagaaa
     1621 gagaaaaact ccagcacttg cggcgcgcca gctaccggtt tttccagggt agtgtactgt
     1681 ttaccatctt catactgcgc cgccgatgcg ctaaacgcta aaactaaacc agccagcgcc
     1741 agccaaatct ttttcatgat ctactctctc cgattaatac ataggtgtta attgtaaagg
     1801 gggttcttgt agaacttttg cctgttctat aaaagtcgcc gtttgtcgca gccagtaatc
     1861 ttccccggtt aaccacggga aatttttcgg gaacgcggga tcagcccaac gccgcattag
     1921 ccaggcaaga taataaacca aacgcatggc gcgtaaaggt tcaatcagtc cgatttcagc
     1981 ggtgtcgaac tcgctaaatt cttcataagc ttcaataata gtttccagtt gcatccgctg
     2041 ctcggcttta tcgccattga gcaacatcca caaatcctga atagctggac cattacgtgc
     2101 atcatccaga tcaacaaaca ttggaccatc gcgccagaga atattcccgg cgtggcagtc
     2161 tccatgtaag cgcagaacgg tggaatcttc ccgccagtgc gctgtaacgg cggcgatcag
     2221 ctcatctgtc gctttcagga atgccgcttt caacccggaa ggtatcagtg tagcgtcctc
     2281 aaacagcttg cgtggctcaa tgagatattc attcagaccg atggtcgggc gatggataaa
     2341 aagctgtttg cgccccgtct ggtgcatacg ccctaaataa cgcccaaccg cttccatctg
     2401 atcgatatta tcagcttcga actggcgacc accgacgctt ggaaaaacag cgaaataaaa
     2461 tccctgatga ttcaataaag tctgaccgtt aaaggccaca ggtgctgcga ccggaacttc
     2521 atcatttacc aactgcaacg caaattgatg ttcttcgagg atttgatcgg ctgtccaacg
     2581 ttcagggcga taaaatttga cgacaatacg tcgacgatct tcgtcctgaa attgatagac
     2641 acggttttca tagctgttaa gcggggtaag accggaatcc acccggatcc cttgctcaaa
     2701 tagagcatcc atgatggtat ccgggtgtag tgtctggaaa gtaaaagcgc tgttgttcat
     2761 cccatcatcc ggaaaacatt acgaatgatg aaggatatca tttcacgatg attttggtgg
     2821 cgccgcttac aagcttttac tctttaatta cgccgcgagc gcgtaacagc gccgttttga
     2881 agtcttcttc ataatctttc tgcaaacccg ggatcaccgc atctttcgcg gaatcacgca
     2941 ttttcaggtg atagatcaga atgtcatccg tcaaatccgc cagttcgccg tcaaaacctg
     3001 actctttcgc cagtttctgc aaaaattgca acaggttaag gtctggctct ttttgccagg
     3061 ctggctggag gaattcaata acttcattca gacgtttaca tttcatagtg atgctcctta
     3121 ctcttgagac agacacgtta gcagggtcaa tcccacaata aaagaggcga tatcggtgaa
     3181 tctgatgacg acgataacag gcgttgtgct ggcaggcggt aaagccagac gaatgggtgg
     3241 cgtagataaa ggattgcttg aattaaacgg caaaccatta tggcaacatg tcgctgacgc
     3301 gcttatgacg cagctctctc acgtcgtggt taatgccaat cgtcatcagg aaatctatca
     3361 ggcaagcggt ctgaaagtga ttgaagattc actggcggat tacccaggcc ctctggcagg
     3421 aatgctttca gtaatgcagc aggaagctgg tgagtggttt ttgttttgcc cgtgcgatac
     3481 gccttacatt ccccctgatt tagcagcccg gcttaatcat cagcgcaaag atgcgcctgt
     3541 cgtgtgggtc catgacggtg aacgcgatca cccgactatt gctctggtaa accgcgctat
     3601 tgagccttta ttactggaat atctgcaagc aggagaacgc cgggtaatgg catttatgcg
     3661 tctggctggc ggtcatgcgg ttgatttcag cgatcataaa gatgcatttg ttaacgtgaa
     3721 tacgccagag gagcttgccc gatggcagga aaaacgatga taccgttact cgcctttgcc
     3781 gcgtggagtg gtaccggaaa aactacgctt ttgaaaaaac tgatcccggc attatgcgcc
     3841 agagggatcc gtccagggct gattaagcat acgcaccatg atatggatgt tgataagcca
     3901 ggcaaagata gctatgagct gcgcaaggct ggcgcggcac aaaccatcgt tgccagccag
     3961 caacgatggg ccttgatgac ggaaacacca gacgaagaag agctggatct acagtttctc
     4021 gcaagtcgaa tggatacctc aaagctggat ttgattctgg tcgaagggtt taagcatgaa
     4081 gagatcgcaa agattgtgct gtttcgcgat ggagccagac atcgacctga agaattagtg
     4141 atagacaggc atgttattgc tgtagccagt gatgtgccgc ttaatcttga tgtcgcatta
     4201 ctggatatta atgatgttga ggggctggct gattttgtgg tggagtggat gcaaaagcag
     4261 aacggataag caagagtagg ctggatcaga cgcagccagt gtcgcatccg acctttttct
//
LOCUS       DADMJE010000227         4294 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.230, whole genome shotgun sequence.
ACCESSION   DADMJE010000227 DADMJE010000000
VERSION     DADMJE010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4294)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4294)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4294
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.230"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            46..2208
                     /gene="ybiO"
                     /locus_tag="JN001_003901"
     CDS             46..2208
                     /gene="ybiO"
                     /locus_tag="JN001_003901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001267224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive channel protein"
                     /protein_id="HAY9054954.1"
                     /translation="MRWILFILFCLLGAPAHAVSIPGVTTTTTTDSTTEPAPEPDIEQ
                     KKAAYGALADVLDNDTSRKELIDQLRTVAATPPAEPVPKIVPPTLVEEQTVLQKVTEV
                     SRHYGEALSARFGQLYRNITGSPHKPFNPQTFSNALTHFSMLAVLVFGFYWLIRLCAL
                     PLYRKMGLWARQKNRERSNWLQLPAMIIGAFIIDLLLLALTLFVGQVLSDNLNAGSRT
                     IAFQQSLFLNAFALIEFFKAVLRLIFCPNVAELRPFTIHDETARYWSRRLSWLSSLIG
                     YGLIVAVPIISNQVNVQIGALANVIIMLCMTVWALYLIFRNKKEITQHLLNFAEHSLA
                     FFSLFIRAFALVWHWLASAYFIVLFFFSLFDPGNSLKFMMGATVRSLAIIGIAAFVSG
                     MFSRWLAKTITLSPHTQRNYPELQKRLNGWLSAALKTARILTVCVAVMLLLSAWGLFD
                     FWNWLQNGAGQKTVDILIRIALILFFSAVGWTVLASLIENRLASDIHGRPLPSARTRT
                     LLTLFRNALAVIISTITIMIVLSEIGVNIAPLLAGAGALGLAISFGSQTLVKDIITGV
                     FIQFENGMNTGDLVTIGPLTGTVERMSIRSVGVRQDTGAYHIIPWSSITTFANFVRGI
                     GSVVANYDVDRHEDADKANQALKDAVAELMENEEIRGLIIGEPNFAGIVGLSNTAFTL
                     RVSFTTLPLKQWTVRFALDSQVKKHFDLVGVRAPVQTY"
     gene            complement(2268..3194)
                     /gene="rlmF"
                     /locus_tag="JN001_003902"
     CDS             complement(2268..3194)
                     /gene="rlmF"
                     /locus_tag="JN001_003902"
                     /EC_number="2.1.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415328.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(1618)-N(6))-methyltransferase
                     RlmF"
                     /protein_id="HAY9054955.1"
                     /translation="MSDQKLGLHPRNRHHSRYDLATLCQVNPELRQFLTLTPAGEQSV
                     DFANPLAVKALNKALLAHFYAVANWDIPDGFLCPPVPGRADYIHHLADLLAEASGTIP
                     ANASILDIGVGANCIYPLIGVHEYGWRFTGSETSSQALSSAQAIISANPGLNRAIRLR
                     RQKESGAIFNGIIHKNEQYDATLCNPPFHDSAAAARAGSERKRRNLGLNKDDALNFGG
                     QQQELWCEGGEVAFIKKMIEESKGFAKQVMWFTSLVSRGENLPPLYRALTDVGAVKVV
                     KKEMAQGQKQSRFIAWTFMNDEQRRRFVNRQR"
     gene            3470..3729
                     /locus_tag="JN001_003903"
                     /pseudo
     CDS             3470..3729
                     /locus_tag="JN001_003903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415327.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1471 domain-containing protein"
     gene            3994..>4294
                     /locus_tag="JN001_003904"
     CDS             3994..>4294
                     /locus_tag="JN001_003904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TonB-dependent receptor plug domain-containing
                     protein"
                     /protein_id="HAY9054956.1"
                     /translation="MENNRNFPARQFHSLTFFAGLCIGITPVAQALAAEGQTNADDTL
                     VVEASTPSLYAPQQSADPKFSRPVADTTRTMTVISEQVIKDQGATNLTDALKNVPG"
BASE COUNT          998 a         1129 c         1075 g         1092 t
ORIGIN      
        1 gcatctatac ttatcttttt gctctgtttt ctcactggag gagtcatgcg gtggatcctg
       61 ttcatcctct tctgcctgct gggcgcacct gcccacgcgg tatccatacc cggcgttaca
      121 accacaacga caacggactc aacgactgaa ccggccccgg aaccggatat cgaacaaaaa
      181 aaagcggcct atggcgcact ggcggatgtg ctggataacg acacctcgcg taaagaattg
      241 atcgaccagt tgcgtactgt cgccgcgacg ccccctgcgg aaccggtccc gaagatcgtg
      301 ccgccgacgc tggttgaaga gcaaaccgtg ctgcaaaagg tcaccgaagt cagccgccat
      361 tatggtgaag ccctttccgc ccgcttcggg caactttatc gcaatattac cggctccccg
      421 cataagccgt ttaatccaca aacattcagc aatgcgctga cccatttttc aatgttagcg
      481 gtattagtgt ttggttttta ctggctgatt cgcctgtgcg cactgccgct gtatcgcaaa
      541 atgggcctgt gggcgcggca aaaaaatcgt gagcgcagta actggttgca gcttccggcg
      601 atgattatcg gggcgtttat tatcgaccta ctgttactgg cactgacatt atttgtcggc
      661 caggtattaa gcgacaacct gaatgcaggc agtcgcacca tcgctttcca acaaagtttg
      721 tttctcaacg cctttgccct gattgaattt ttcaaagctg tactacgcct gattttttgc
      781 ccaaacgtgg ctgaactgcg cccgttcacg attcatgacg agaccgcccg ttactggagt
      841 cgtcgcctga gctggttaag cagtttgata ggttatggcc tgattgtggc cgtgccgatt
      901 atctctaatc aggtgaatgt acagataggt gcgctggcga acgtcatcat tatgctgtgc
      961 atgaccgtct gggcgttgta cctgatcttt cgcaataaaa aagagattac ccaacatttg
     1021 ctcaactttg cggagcattc gctggccttt ttcagcctgt ttatccgcgc ctttgcgctg
     1081 gtgtggcact ggctggcaag cgcctatttt atcgtgctgt ttttcttttc gttgttcgat
     1141 ccgggcaaca gcctgaaatt tatgatgggt gcaacggtgc gcagcctggc gattattggt
     1201 atcgcagcgt ttgtttccgg tatgttttcc cgctggctgg cgaaaaccat caccctctcg
     1261 ccacatactc agcgtaacta tccggagttg caaaaacggc tgaatggctg gctttcggcg
     1321 gcgctgaaaa cggcgcgtat tctgaccgtc tgcgtggcgg taatgttgct gttgagcgca
     1381 tggggattgt tcgatttctg gaactggctg caaaacggcg cggggcagaa aaccgtagat
     1441 atcctgatcc gtatcgcact tattcttttt ttctcggcgg ttggctggac ggtgctcgcc
     1501 agtttgatcg aaaaccggct ggcttcggat attcatggcc gcccgctacc cagcgcccgt
     1561 acgcgtaccc tgctgacgct gtttcgtaac gcgctggcgg tgattatcag taccatcacc
     1621 atcatgattg tgttgtcgga aatcggcgtc aatatcgcgc cattgctggc aggtgccggg
     1681 gcattaggtc tggctatctc gtttggttcg caaacgctgg tgaaagatat cattaccggg
     1741 gtgtttattc agtttgaaaa cggcatgaac actggagatt tggtgactat cgggccgttg
     1801 accggcacag tggaacggat gtcgattcgc tccgtgggcg tgcgccagga taccggggcg
     1861 tatcacatca ttccgtggtc ttcgataacc acctttgcta acttcgtccg cggtattggt
     1921 tcggtagtgg caaactacga tgttgatcgc catgaagatg ctgataaagc caatcaggca
     1981 ctgaaagatg cggtagcgga attgatggaa aacgaagaaa ttcgcgggct gattattggt
     2041 gaaccgaatt ttgccgggat tgtcggctta agcaataccg cgtttacact gcgtgtttcg
     2101 ttcaccacgc tgccactcaa acagtggacg gtacgctttg ccctcgacag ccaggtgaaa
     2161 aaacatttcg acctggtggg cgttcgcgcg ccagtgcaga cttattaggt gctgcctact
     2221 ccgggcgcga ccccggctga accgttaccg ccgggggagc caacgcttta acgctggcga
     2281 ttgacaaaac ggcggcgctg ctcgtcgttc ataaaggtcc aggcaataaa gcgactctgc
     2341 ttttgcccct gggccatctc tttttttacc accttcaccg cgcccacgtc ggtcagagca
     2401 cgatacaacg gcggtaagtt ttcaccacga gataccagcg aggtaaacca catcacctgc
     2461 ttcgcgaagc ctttgctctc ttcaatcatc tttttgataa aggcgacttc accaccttca
     2521 caccacaact cctgttgctg accaccaaag ttcagtgcat cgtctttgtt cagccccagg
     2581 ttacggcgtt tacgctcact acctgcccgc gctgcagcgg cggaatcgtg gaatggcggg
     2641 ttacacaagg tcgcgtcgta ttgctcgttt ttatggatga tgccgttaaa aattgcccca
     2701 ctctcttttt gccgacgcag acgaatggcg cggttaagcc ccggattagc actgataatc
     2761 gcctgcgcac tgcttaacgc ctggctgctg gtttcactac cggtaaaacg ccagccatat
     2821 tcatgtacgc caatcagcgg ataaatacag ttcgcaccaa cgccgatatc cagaatgctg
     2881 gcattcgctg gaattgttcc gcttgcttca gccagtaaat cggcaaggtg atgaatataa
     2941 tccgcccggc cgggtactgg tgggcagaga aaaccgtcgg ggatatccca gttcgctacg
     3001 gcgtaaaaat gggccagcaa cgccttattg agcgccttca ccgccagcgg attggcaaag
     3061 tctacgcttt gctccccggc gggtgtaagc gtgaggaatt gcctgagttc aggattgacc
     3121 tgacaaagcg tggcgagatc gtagcggctg tgatgacggt tgcgcggatg caaccccagt
     3181 ttctggtcgg acatagcatt ctcctttaag cagcggcgta agatacccgc ataacgcgac
     3241 agggtaaata tctggctgcg tttatcattc cccaaaacct taacatggct atggtttatg
     3301 gcaattcatc ataaaaatca gcattatgca tgtcattgat ttgtcttatt ttgtaaaaat
     3361 atatcgttca aaaaataagc acatctctgt caattttttg cgtcatttgc atcgcgcagg
     3421 cgacctacac ttatcaggca ctacccgttg tatttatgag gatgtcatta tgaaaaagtg
     3481 cctcacacta ctgattgcca ccgtcctgag cagaatctct ctcacggctt atgccgcgca
     3541 accgatgagt aacctggaca gcggtcagct acggcccgcg gtaccgtttc ggcaactggc
     3601 gcatcaaacc taagcgatct ggaggataaa ctggcagaaa aagcgcgcga acaaggcgcg
     3661 aaaggttatg tcattaattc cgcaggcgga aatgaccaga tgttcggtac tgcaaccatc
     3721 tacaaataac cccaccaacg taactgcatt cgcctctgga tgcagttttc gcctgttttg
     3781 taatcaaaaa acatcaaata tgaactcaat gtaaataaat gtatttcttt ttcgcgcaat
     3841 gggtgataga aaatcgcgcc aagtgataat gtttatcaaa attattatca cttgcatgaa
     3901 cactatcacg ggattaacag tggcatcgca tccgcagaga tgctttctcg tgacagtgaa
     3961 aatttcaaca tataagaaaa agtcacctgc aaaatggaaa acaatcgcaa tttccctgcc
     4021 agacaatttc attcgctcac gttctttgcc ggtctttgta ttggcatcac gcctgtggct
     4081 caggcactcg ccgccgaagg gcaaactaac gcggatgaca cgctggttgt cgaagcatca
     4141 acgccttcgc tttatgcgcc acaacaatct gccgatccga aattctcgcg tccggtagcg
     4201 gatactaccc gcacgatgac ggtgatttct gaacaagtga ttaaagatca gggcgcaacc
     4261 aaccttaccg acgcgctcaa aaacgtcccc ggcg
//
LOCUS       DADMJE010000228         4267 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.231, whole genome shotgun sequence.
ACCESSION   DADMJE010000228 DADMJE010000000
VERSION     DADMJE010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4267
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.231"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..213)
                     /locus_tag="JN001_003905"
     CDS             complement(<1..213)
                     /locus_tag="JN001_003905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416381.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HAY9054957.1"
                     /translation="MLELNAKTTALVVIDLQEGILPFAGGPHTADEVVNRAGKLAAKF
                     RASGQPVFLVRVGWSADYAEALKQPVD"
     gene            523..2295
                     /gene="aspS"
                     /locus_tag="JN001_003906"
     CDS             523..2295
                     /gene="aspS"
                     /locus_tag="JN001_003906"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HAY9054958.1"
                     /translation="MRTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMRDREGI
                     VQVFFDPDRADALKLASELRNEFCIQVTGTVRARDEKNINRDMATGEIEVLASSLTII
                     NRADVLPLDSNHVNTEEARLKYRYLDLRRPEMAQRLKTRAKITSLVRRFMDDHGFLDI
                     ETPMLTKATPEGARDYLVPSRVHKGKFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRD
                     EDLRADRQPEFTQIDVETSFMTAPQVREVMEALVRHLWLEVKGVDLGDFPVMTFAEAE
                     RRYGSDKPDLRNPMELTDVADLLKSVEFAVFAGPANDPKGRVAALRVPGGASLTRKQI
                     DEYGNFVKIYGAKGLAYIKVNERAKGLEGINSPVAKFLNAEIIEAILDRTAAQDGDMI
                     FFGADNKKIVADAMGALRLKVGKDLGLTDESKWAPLWVIDFPMFEDDGEGGLTAMHHP
                     FTSPKDMTAAELKAAPENAVANAYDMVINGYEVGGGSVRIHNGDMQQTVFGILGINEE
                     EQREKFGFLLDALKYGTPPHAGLAFGLDRLTMLLTGTDNIRDVIAFPKTTAAACLMTE
                     APSFANPTALAELSIQVVKKAENN"
     gene            2413..2865
                     /gene="nudB"
                     /locus_tag="JN001_003907"
     CDS             2413..2865
                     /gene="nudB"
                     /locus_tag="JN001_003907"
                     /EC_number="3.6.1.67"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin triphosphate diphosphatase"
                     /protein_id="HAY9054959.1"
                     /translation="MKDKVYKRPVSILVVIYAQDTKRVLMLQRRDDPDFWQSVTGSVE
                     EGETAPQAAMREVKEEVTIDVVAEQLTLIDSQRTVEFEIFSHLRHRYAPGVTRNTESW
                     FCLALPHERQIVFTEHLAYKWLDAPAAAALTKSWSNRQAIEQFVINAA"
     gene            2894..3634
                     /locus_tag="JN001_003908"
     CDS             2894..3634
                     /locus_tag="JN001_003908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000907250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HAY9054960.1"
                     /translation="MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPD
                     ANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECL
                     SDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVITFEKGDEDTIMEAALEAGAE
                     DVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMR
                     LIDMLEDCDDVQEVYHNGEISDEIAATL"
     gene            3669..4190
                     /gene="ruvC"
                     /locus_tag="JN001_003909"
     CDS             3669..4190
                     /gene="ruvC"
                     /locus_tag="JN001_003909"
                     /EC_number="3.1.22.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005068993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HAY9054961.1"
                     /translation="MAIILGIDPGSRVTGYGVIRQVGRQLSYLGSGCIRTKVDDLPSR
                     LKLIYAGVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVFEY
                     AARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITHCHVSQNAMQM
                     SESRLNLARGRLR"
BASE COUNT         1054 a         1060 c         1199 g          954 t
ORIGIN      
        1 atcaaccggc tgttttaatg cttcggcgta atcggcagac cagccaactc gcaccagaaa
       61 cacgggctga ccgctggcgc gaaatttcgc cgccagcttc ccggcgcgat taactacctc
      121 atcggcagta tgtggaccac cggcaaaagg taagatgcct tcttgtaaat cgatcaccac
      181 caacgcagtg gttttagcat taagttcaag catgctgact cctgaaaaaa caaaatcgtg
      241 cctcacacct taatgcgatt agccgatggc ggaacgacaa attttgttaa tttttatgag
      301 ttcgggcaac acctttatag caaactggcg tagagtctga tttcaggccc gatataaagt
      361 ggtaacgagg cgttccagcg cgggctaggc tcttacggtg cggcagaatt tccagtataa
      421 tagccgcctt ttttcattca gttgtgacat acagctaacg ctgcgacttg gtcacctgcg
      481 cagcaggggg catccgccgg cagctaagtt aagggatatc tcatgcgtac agaatattgt
      541 ggacagctcc gtttgtccca cgtggggcag caggtgactc tgtgtggttg ggtcaaccgt
      601 cgtcgtgatc ttggtagcct gatcttcatc gatatgcgcg accgcgaagg tatcgtgcag
      661 gtatttttcg atccggatcg tgcggacgcg ttaaagctgg cctctgaact gcgtaatgag
      721 ttctgcattc aggtcacggg caccgtacgt gcgcgtgacg aaaaaaatat taaccgcgat
      781 atggcgaccg gcgaaatcga agtgctggcg tcctcgctga ctatcatcaa ccgcgcagat
      841 gttctgccgc ttgactctaa ccacgtcaac accgaagaag cgcgtctgaa ataccgctac
      901 ctcgacctgc gtcgtccgga aatggctcag cgcctgaaaa cccgcgctaa aatcaccagc
      961 ctggtgcgcc gttttatgga tgaccacggc ttcctcgaca tcgaaactcc gatgctgacc
     1021 aaagccacgc cggaaggcgc gcgtgactac ctggtgcctt ctcgtgtgca caaaggtaaa
     1081 ttctacgcac tgccgcaatc cccacagttg ttcaaacagc tgctgatgat gtccggtttt
     1141 gaccgttact atcagatcgt taaatgcttc cgtgacgaag acctgcgcgc tgatcgtcag
     1201 cctgagttta ctcagatcga tgtggaaact tctttcatga ccgcgccgca agtgcgtgaa
     1261 gtgatggaag cgctggtgcg tcatttgtgg ctggaagtga agggcgtgga tctgggcgat
     1321 ttcccggtaa tgacctttgc ggaagcagaa cgccgttatg gttctgataa accggatctg
     1381 cgtaacccga tggaactgac cgacgttgcc gatctgctga aatctgttga gtttgcagta
     1441 tttgcggggc cggcgaacga tccgaaaggc cgtgttgccg ctctacgtgt tccgggtggc
     1501 gcatcgctga cccgtaagca gatcgacgaa tacggtaact tcgttaaaat ctacggcgcg
     1561 aaaggtctgg cttacatcaa agttaacgaa cgcgcgaaag gtctggaagg tatcaacagc
     1621 ccggtagcga agttccttaa tgcagaaatc atcgaagcca tcctggatcg tactgccgcg
     1681 caagatggcg atatgatttt cttcggtgcc gacaacaaga aaattgttgc cgacgcgatg
     1741 ggcgcactgc gcctgaaagt gggtaaagac cttggtctga ccgacgaaag caaatgggca
     1801 ccgctgtggg ttatcgactt cccgatgttt gaagacgacg gtgaaggcgg cctgacggca
     1861 atgcaccatc cgttcacctc accgaaagac atgactgctg cagaactgaa agctgcaccg
     1921 gaaaatgcgg tggcgaacgc ttacgatatg gtcatcaatg gttacgaagt gggcggtggt
     1981 tcagtacgta tccataatgg tgatatgcag cagacggtgt ttggtattct gggtatcaac
     2041 gaagaggaac agcgcgagaa attcggcttc ctgctcgacg ccctgaaata cggtactccg
     2101 ccgcacgcag gtctggcatt cggtcttgac cgtctgacca tgctgctgac tggcaccgac
     2161 aatatccgtg acgttatcgc cttcccgaaa accacggcgg cagcgtgtct gatgactgaa
     2221 gcaccgagct ttgctaaccc gactgcactg gctgagctga gcattcaggt tgtgaagaag
     2281 gcagagaata actgatatga ctcaaataca cgaaatcatt cgcgttgcat caaggcggca
     2341 attgagtgaa ctcccatgag catagataac tatgtgaatg ggatgagcga aggcagtcaa
     2401 cgaagaggca gcgtgaagga taaagtgtat aagcgtcccg tttcgatctt agtggtcatc
     2461 tatgcacaag atacgaaacg ggtgctgatg ttgcagcggc gtgacgatcc cgatttctgg
     2521 cagtcggtaa ccggcagcgt ggaagagggt gaaaccgcgc cgcaagctgc catgcgcgaa
     2581 gtaaaggaag aggtcaccat tgatgttgtc gctgaacaac tgaccttaat tgacagtcag
     2641 cgcacggtag agtttgaaat tttttcacat ttacgtcatc gctatgcgcc gggcgtgacg
     2701 cgtaatacgg aatcatggtt ctgtcttgcg cttccgcacg agcggcagat cgttttcact
     2761 gaacatctgg cttacaagtg gcttgatgcg cctgctgcgg cggcgctcac taagtcctgg
     2821 agcaaccggc aggcgattga acagtttgta attaacgctg cctgaacagg cagggctatc
     2881 tggagatatt tttatggcag gtcatagtaa atgggccaac accagacatc gtaaagctgc
     2941 gcaggatgct aagcgcggta aaatcttcac taaaatcatt cgtgagctgg taaccgcggc
     3001 taagctgggc ggtggcgatc cggacgctaa cccgcgtctg cgtgcggcgg tggataaagc
     3061 actgtctaac aacatgaccc gtgacacact gaaccgcgca attgcacgtg gtgtgggcgg
     3121 tgatgatgat gcaaacatgg aaaccatcat ctacgaaggt tacggtcctg gcggcacggc
     3181 aatcatgatt gaatgtctgt ctgacaaccg caaccgtacc gttgctgaag tgcgtcatgc
     3241 attcagcaaa tgtggcggta acctcggtac agatggttcc gtagcctatc tgttcagcaa
     3301 aaaaggcgtg atcaccttcg agaaaggcga tgaagacacc atcatggaag cagctctgga
     3361 agcaggtgct gaagacgttg tgacctatga tgacggcgcg attgatgtct acactgcatg
     3421 ggaagaaatg ggtaaagtgc gcgacgctct ggaagcggca ggtctgaaag cagacagcgc
     3481 ggaagtttcc atgatcccgt ccaccaaagc tgatatggat gcagaaaccg caccgaaact
     3541 gatgcgtctg atcgatatgc tggaagattg cgacgacgtg caggaagttt accataacgg
     3601 tgaaatctct gatgagattg cagcgactct ctgatgaggc ctgctaaaca gcaaaacgga
     3661 gacgcgtgat ggctattatt ctcggcattg acccgggttc gcgcgtgacc ggctatggcg
     3721 tcatccgcca ggtaggcagg caactgtcct acctgggtag cggatgcata cgcaccaagg
     3781 tggatgattt accgtctcgt ctgaagctca tctatgcggg cgtgacggaa atcatcaccc
     3841 agttccagcc agattatttc gccattgaac aagtctttat ggccaaaaat gccgactcgg
     3901 ctctgaaact ggggcaggcg cgcggcgtgg cgattgtggc ggcggtgaat caggaattgc
     3961 cggtatttga atatgcggca cgtcaggtaa agcaaacggt ggtaggtatt ggtagtgccg
     4021 aaaaaagtca ggtgcagcat atggtccgca ccttgctgaa actgcccgct aatccacagg
     4081 cggatgccgc cgatgcgtta gctatcgcga ttacccattg tcacgtcagc cagaatgcaa
     4141 tgcagatgag cgaatcgcgg ctgaacctgg cgagagggcg actgcgttaa gttataccgc
     4201 ctcggtcagt tcaggctgag gcgtttcaac tccctccgcg tgaatcaaca ccaaacccgg
     4261 atgatgc
//
LOCUS       DADMJE010000229         4203 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.232, whole genome shotgun sequence.
ACCESSION   DADMJE010000229 DADMJE010000000
VERSION     DADMJE010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4203)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4203)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4203
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.232"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            112..615
                     /gene="yeaK"
                     /locus_tag="JN001_003910"
     CDS             112..615
                     /gene="yeaK"
                     /locus_tag="JN001_003910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mischarged aminoacyl-tRNA deacylase"
                     /protein_id="HAY9054962.1"
                     /translation="MTEMAKGSVTHQRLIALLSQEGANFRVVTHEAVGKCEAVSEIRG
                     TALGQGAKALVCKVKGNGVNQHVLAILAADQQADLSQLASHIGGLRASLASPAEVDEL
                     TGCVFGAIPPFSFHPKLKLVADPLLFERFDEIAFNAGMLDKSVILKTTDYLRIAQPEL
                     VNFRRTA"
     gene            complement(616..720)
                     /locus_tag="JN001_003911"
     CDS             complement(616..720)
                     /locus_tag="JN001_003911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416302.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054963.1"
                     /translation="MNDQMFVETLIITSSFFAIAVVLVLSVLLIERTG"
     gene            889..1335
                     /locus_tag="JN001_003912"
     CDS             889..1335
                     /locus_tag="JN001_003912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HAY9054964.1"
                     /translation="MFDVTLLILLGLAALGFISHNTTVAVSILVLIIVRVTPLSTFFP
                     WIEKQGLSIGIIILTIGVMAPIASGTLPPSTLIHSFLNWKSLVAIAVGVIVSWLGGRG
                     VTLMGSQPQLVAGLLVGTVLGVALFRGVPVGPLIAAGLVSLIVGKQ"
     gene            complement(1292..2113)
                     /locus_tag="JN001_003913"
     CDS             complement(1292..2113)
                     /locus_tag="JN001_003913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9054965.1"
                     /translation="MMHRLNLNGYEPDRHHEAAVAFCIHAGTDELTSPVHQHRKGQLI
                     LALHGAITCTVENALWMVPPQYAVWIPGGVEHSNQVTANAELCFLFIEPSAVTMPTTC
                     CTLKISPLCRELILTLANRTTTQRAEPMTRRLIQVLFDELPQQPQQQLHLPVSSHPKI
                     RTMVEMMAKGPVEWGSLGQWAGFFAMSERNLARLIVKETGLSFRQWRQQLQLIMALQG
                     LVKGDTVQKVAHTLGYDSTTAFITMFKKGLGQTPGRYIAGLTTVSPQSAKPDPRQ"
     gene            2210..3406
                     /gene="nimT"
                     /locus_tag="JN001_003914"
     CDS             2210..3406
                     /gene="nimT"
                     /locus_tag="JN001_003914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005117270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-nitroimidazole transporter"
                     /protein_id="HAY9054966.1"
                     /translation="MTCSTSLSGKNRIVLIAGILMIATTLRVTFTGAAPLLDTIRSAY
                     SLTTAQTGLLTTLPLLAFALISPLAAPVARRFGMERSLFAALLLICAGIAIRSLPSPY
                     LLFGGTAVIGGGIALGNVLLPGLIKRDFPHSVARLTGAYSLTMGAAAALGSAMVVPLA
                     LNGFGWQGALLMLMCFPLLALFLWLPQWRSQQHANLSTSRALHTRGIWRSPLAWQVTL
                     FLGSNSLVYYVIIGWLPAILISHGYSEAQAGSLHGLLQLATAAPGLLIPLFLHHVKDQ
                     RGIAAFVALMCAVGAVGLCFMPAHAITWTLLFGFGSGATMILGLTFIGLRASSAHQAA
                     ALSGMAQSVGYLLAACGPPLMGKIHDANGNWSVPLMGVAILSLLMAIFGLCAGRDKEI
                     RSYPVL"
     gene            3446..3793
                     /locus_tag="JN001_003915"
     CDS             3446..3793
                     /locus_tag="JN001_003915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310528.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HAY9054967.1"
                     /translation="MNIQCKRVYDPAEQSDGYRVLVDRLWPRGIKKTDLALDEWDKEI
                     TPSTELRKAFHGEVVDFTTFREQYLAELAQHEQEGKRLADIAKKQPLTLLYAAKNTTQ
                     NHALVLADWLRSL"
     gene            complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JN001_003916"
     CDS             complement(3815..4069)
                     /gene="yoaF"
                     /locus_tag="JN001_003916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF333 domain-containing lipoprotein YoaF"
                     /protein_id="HAY9054968.1"
                     /translation="MKIISFVLPCLLVLAGCSTPSQPEAPKPPQIGMANPASVYCQQK
                     GGTLIPVSTAQGVSNNCKLPGGETIDEWALWRRDHPAGEK"
BASE COUNT          967 a         1065 c         1043 g         1128 t
ORIGIN      
        1 catgatgcgt ataaagcttc cgatgagcgt ttatatgtca ataagcagaa caaaaacagc
       61 cgttcatgat aaccttctgt ggttgtttgc ttgtaatctc aggagcgtga aatgactgaa
      121 atggctaaag gaagcgtgac gcatcagcgg ttaatcgctt tattatcaca agaaggtgct
      181 aacttccgcg tcgttaccca tgaagcggta ggtaaatgtg aagcggtgtc agaaattcgt
      241 ggcaccgctt taggccaggg agctaaggca ctggtatgta aagtcaaagg caatggcgta
      301 aatcaacatg ttctggcgat cctcgctgcc gatcaacagg ccgatctgag ccaacttgcc
      361 agccatatag gcggattacg cgcttcgtta gccagccctg ctgaagtcga tgaactcaca
      421 ggctgtgtct tcggcgcgat cccccctttc agcttccatc caaaactcaa actggttgcc
      481 gaccctctac tcttcgaacg atttgatgaa atcgccttca atgcagggat gctggataaa
      541 tccgttattt tgaaaaccac ggattatttg cgcattgcgc aaccagaact ggtcaatttc
      601 cgccgcactg cgtaactagc ctgtccgttc aataagcaga acggacaaaa ccagcacaac
      661 agcaatggca aaaaacgatg acgtgataat cagtgtctcg acgaacattt gatcgttcat
      721 agcatgcccc cgggagatag ctgttttcac gttattgtta gcgtgcacaa atggcagttt
      781 gatgacagtt cgcctgattt ttatgcaaaa aacgtaaaga ttttctactt ccttcctgca
      841 gcaagcgtaa agtaagcagg cttattattt tttggcaagg aaaccacgat gtttgatgtc
      901 actttgctga tcctgctcgg gttagctgcg ctgggcttta tcagtcataa caccactgtc
      961 gccgtttcaa ttctggtgtt gatcattgtc cgcgtcacac cgttaagcac ctttttcccg
     1021 tggattgaaa aacaggggct aagtatcggg ataatcattc tgacgattgg cgttatggcc
     1081 cccatcgcca gcgggacgct accgccctca accttgattc actcgtttct gaactggaaa
     1141 tcgctggtgg caattgcagt aggcgtgatt gtctcctggc tgggtgggcg cggcgtgacc
     1201 ttaatgggca gccagccgca actggtcgcc gggctgctgg taggcactgt tttaggcgtg
     1261 gcgctgtttc gcggcgtacc ggtcggcccg cttattgccg cgggtctggt ttcgctgatt
     1321 gtggggaaac agtagttaat cccgcaatat atcggcctgg cgtttgcccc aggcctttct
     1381 taaacatagt aataaaggcc gttgttgaat cataccccag cgtatgagca actttctgta
     1441 cagtatcgcc tttcactaat ccctgaagtg ccataatcag ctgtaactgc tgacgccact
     1501 ggcgaaaact caaccccgtc tcttttacga tcagtcgcgc aagattgcgt tcactcatcg
     1561 caaaaaagcc agcccattgc cctaatgacc cccactcgac gggccctttc gccatcatct
     1621 ccaccatcgt gcggatttta ggatgagaag aaacgggcag gtgcagctgt tgttgtggct
     1681 gctgagggag ttcatcaaac aggacctgta ttaatctgcg ggtcatcggc tcagcacgct
     1741 gagtcgtcgt cctgtttgcc agggttaaaa tcaattcccg gcataagggc gatattttca
     1801 atgtgcaaca tgttgtcggc attgtcactg cgctgggttc gataaacaga aaacagagtt
     1861 cagcgttagc tgtcacttga ttgctatgtt ccaccccgcc cggtatccaa accgcatatt
     1921 gcggcggcac catccacaaa gcattttcca ccgtacaggt aattgcacca tgtaatgcta
     1981 gtatcagctg tcctttgcgg tgctgatgta caggactggt taactcatcc gttccggcgt
     2041 gaatacaaaa tgcgaccgcg gcttcatggt gtcggtcggg ttcatagcca ttgagattca
     2101 acctgtgcat cattttgtcc gaatttagcg ataatttgtc attttagctt gattcaacat
     2161 aacaataaaa acggtaaggt acagcctcgt ttgtaacaat gagaagcata tgacctgttc
     2221 aacttcatta agcggcaaaa acaggattgt ccttatcgct ggcattctga tgattgccac
     2281 aacattacgc gtcaccttta ccggcgcagc accgttactg gatacgattc gttccgctta
     2341 ctcgctgacg acagcgcaaa ccggcttatt gaccaccctg ccattattgg cctttgcgct
     2401 aatctcacct ttggccgccc cggtagcgcg acgttttggt atggaacgta gcctgtttgc
     2461 cgcgttactt ttgatctgtg ctggtatcgc aattcgctct ctcccttcgc cttacttatt
     2521 atttggcggt acagcggtca ttggcggtgg gattgcatta ggcaatgtct tactgccagg
     2581 attaattaaa cgcgatttcc ctcattccgt cgccagactt accggcgcat attccctgac
     2641 aatgggagct gcggcggcac ttggatcggc tatggtagtg ccgctggctt tgaacggttt
     2701 tggctggcaa ggcgcgttgc tcatgctgat gtgttttcct ctgctggctc tttttttatg
     2761 gctgccacag tggcgaagcc aacaacatgc aaatttgagt acctcgcgcg ccttacatac
     2821 tcggggtatc tggcgttcgc cgcttgcctg gcaggtcaca ttgtttcttg ggagcaactc
     2881 actggtctat tacgtgatta ttggctggct tccggcgatc ctcatcagtc acggctatag
     2941 cgaagcacag gcgggttcac tgcatggttt gctgcaacta gccacagcag ctcccggttt
     3001 gctgatccct cttttcttac atcatgtgaa agaccagcgt ggtattgcag cgttcgttgc
     3061 cttgatgtgc gcagtgggcg ctgttgggct ctgctttatg ccagcgcacg cgatcacctg
     3121 gactctgctt ttcggttttg gttccggcgc aacaatgata ctggggttga cgttcattgg
     3181 tcttcgggca agttctgcgc atcaggcggc ggcactctcg gggatggcac aatccgtcgg
     3241 gtatttgctg gcagcctgtg ggccgccgct aatgggtaaa atacacgatg ctaacggtaa
     3301 ctggtccgta ccactgatgg gtgttgcaat actttcacta ctgatggcga ttttcggact
     3361 ttgcgccggg agagacaaag aaattcgctc atatccggtg ctatagtgac gtgacaaatc
     3421 atgcgtgaaa gggagaacaa acacgatgaa tattcagtgc aaacgcgttt atgatccggc
     3481 tgaacagagc gatggttatc gcgtactggt cgaccgcctc tggccgcgcg gtatcaaaaa
     3541 aaccgattta gcccttgatg agtgggataa agaaatcacg ccgtcaacgg aactgcgcaa
     3601 agcctttcac ggcgaagtcg tcgattttac aacctttcgc gagcaatatc ttgcagaact
     3661 ggcgcaacac gagcaagaag gaaagcggct ggcggacatc gccaaaaaac agccgctgac
     3721 cctgctctac gcagcaaaaa acaccacgca gaaccatgcg ctggtgctgg ccgactggct
     3781 acgtagcttg tgattttagt acagcatccg gcggttattt ttcaccagcc ggatggtccc
     3841 gtcgccacaa tgcccattca tcaatcgttt caccgcccgg taatttgcaa ttgttgctga
     3901 ccccttgcgc tgtcgacact ggaatgagcg tcccgccctt ctgctggcaa tagaccgacg
     3961 ccggatttgc cataccaatc tgcggcggtt taggtgcttc tggctgagaa ggggttgaac
     4021 aaccagccag gaccagcaag caaggcagaa caaaactgat aattttcatt tattgatctc
     4081 acatatttat ccagacttag agtatcgcgg tatcgttttg ttttgcagca ctatttttat
     4141 tacattcact caaaacatat tacgtcttgt ttcatctttg ttgatgatgt tttatcatgc
     4201 ctg
//
LOCUS       DADMJE010000230         4183 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.233, whole genome shotgun sequence.
ACCESSION   DADMJE010000230 DADMJE010000000
VERSION     DADMJE010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.233"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..209)
                     /locus_tag="JN001_003917"
     CDS             complement(<1..209)
                     /locus_tag="JN001_003917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY9054969.1"
                     /translation="MSKEKFERTKPHVNVGTIGHVDHGKTTLTAAITTVLAKTYGGAA
                     RAFDQIDNAPEEKARGITINTSHVE"
     gene            complement(324..399)
                     /locus_tag="JN001_003918"
     tRNA            complement(324..399)
                     /locus_tag="JN001_003918"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(364..366),aa:Thr,seq:ggt)
     gene            complement(406..480)
                     /locus_tag="JN001_003919"
     tRNA            complement(406..480)
                     /locus_tag="JN001_003919"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(445..447),aa:Gly,seq:tcc)
     gene            complement(597..681)
                     /locus_tag="JN001_003920"
     tRNA            complement(597..681)
                     /locus_tag="JN001_003920"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(645..647),aa:Tyr,seq:gta)
     gene            complement(690..765)
                     /locus_tag="JN001_003921"
     tRNA            complement(690..765)
                     /locus_tag="JN001_003921"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(730..732),aa:Thr,seq:tgt)
     gene            1127..2077
                     /gene="coaA"
                     /locus_tag="JN001_003922"
                     /gene_synonym="panK"
     CDS             1127..2077
                     /gene="coaA"
                     /locus_tag="JN001_003922"
                     /gene_synonym="panK"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HAY9054970.1"
                     /translation="MSIKEQTLMTPYLQFDRNQWAAQRDSVPMTLSEDEIARLKGINE
                     DLSLEEVAEIYLPLSRLLNFYISSNLRRQAVLEQFLGTNGQRIPYIISIAGSVAVGKS
                     TTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGLMKKKGFPESYDMHRLVKFV
                     SDLKSGVPNVTAPVYSHLIYDVIPDGDKTVVQPDILILEGLNVLQSGMDYPHDPHHVF
                     VSDFVDFSIYVDAPEDLLQTWYINRFLKFREGAFTDPDSYFHNYAKLTKEEAIKTAMT
                     LWKEINWLNLKQNILPTRERASLILTKSANHAVEEVRLRK"
     gene            complement(2106..3071)
                     /gene="birA"
                     /locus_tag="JN001_003923"
     CDS             complement(2106..3071)
                     /gene="birA"
                     /locus_tag="JN001_003923"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional biotin--[acetyl-CoA-carboxylase]
                     ligase/biotin operon repressor BirA"
                     /protein_id="HAY9054971.1"
                     /translation="MKDNTVPLKLIALLANGEFHSGEQLGETLGMSRAAINKHIQTLR
                     DWGVDVFTVPGKGYSLPEPIQLLNAEQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK
                     SGDACVAEYQQAGRGRRGRKWFSPFGANLYLSMFWRLEQGPAAAIGLSLVIGIVMAEV
                     LRKLGADKVRVKWPNDLYLQDRKLAGILVELTGKTGDAAQIVIGAGINMAMRRVEESV
                     VNQGWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPV
                     KLIIGDKEIFGISRGIDKQGALLLEQDGIIKPWMGGEISLRSAEK"
     gene            complement(3068..4096)
                     /gene="murB"
                     /locus_tag="JN001_003924"
     CDS             complement(3068..4096)
                     /gene="murB"
                     /locus_tag="JN001_003924"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HAY9054972.1"
                     /translation="MNHSLKPWNTFGIDHNAQHIVCAEDEQQLLNAWQYATAEGQPVL
                     ILGEGSNVLFLEDYRGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRLVKYTLQEGMP
                     GLENLALIPGCVGSSPIQNIGAYGVELQRVCAYVDCVELATGKQVRLTAKECRFGYRD
                     SIFKHEYQDRFAIVAVGLRLLKEWQPVLTYGDLTRLDPTTVTPQQVFNAVCHMRTTKL
                     PDPKVNGNAGSFFKNPVVSAETAKALLAQFPTAPNYPQAGGSVKLAAGWLIDQCQLKG
                     MQMGGAAVHRQQALVLINEDNAKSEDVVQLAHHVRQKVGEKFNVWLEPEVRFIGASGE
                     VSAVETIS"
BASE COUNT         1078 a         1041 c          933 g         1131 t
ORIGIN      
        1 tattcaacgt gagaagtgtt gatggtgata ccacgagctt tttcttccgg cgcgttatcg
       61 atctggtcga atgcgcgagc agcaccgccg taggttttag ccagtacggt agtgattgca
      121 gcggtcagcg ttgttttacc atggtcaacg tggccgatag taccgacgtt aacgtgcggt
      181 tttgtacgtt caaacttttc tttagacatc gattgtccct ctaagacacg gataaatcgg
      241 tgatatcacc acatcaacca ggcaacatgc ccgacttgtt gaatgcaata aacagaagga
      301 aaaaacaggg aggagaaaag aagtggtgct gataggcaga ttcgaactgc cgacctcacc
      361 cttaccaagg gtgcgctcta ccaactgagc tatatcagca catcttggag cgggcagcgg
      421 gaatcgaacc cgcatcatca gcttggaagg ctgaggtaat agccattata cgatgcccgc
      481 atcctggaac tcggctacct gattttcatt ctgcactgaa tatcgagaga agctctcttt
      541 attcgagccg gtaagcgaac ttatcgtctc gggctacgcc atcgcgtggc cgaaattggt
      601 ggtgggggaa ggattcgaac cttcgaagtc tgtgacggca gatttacagt ctgctccctt
      661 tggccgctcg ggaaccccac cggacttgat ggtgccgact accggaatcg aactggtgac
      721 ctactgatta caagtcagtt gctctaccta ctgagctaag tcggcatcaa gtagcgcgca
      781 ttctatggag acatgcgagt tcatgcaact aaaaaattgc ataatttgtt ttattggtca
      841 cattttatgc gacacgatga agaaacagcc gaatggaggg cagattagca cactttttca
      901 acatcattgt gctcaacaat gcgctcctgc taaaccataa ttcttcttat cagatggaat
      961 atctgtcaca ttgcttttca acgatagctt cctaggagag attttttctt attattcctc
     1021 cccatctggt gttaccctcc tgcccattaa cccattcaac agaactgtga cgcgccatgg
     1081 caaatatcgc tttgccgata gagctatgac cgccagaaac atgcttatga gtataaaaga
     1141 gcaaacgtta atgacgcctt acctacagtt tgaccgcaac cagtgggcag ctcagcgtga
     1201 ttccgtacct atgacgttat cggaagatga gatcgcccgt ctcaaaggta ttaatgaaga
     1261 tctctcgtta gaagaagttg ccgagatcta tttacctctg tcacgtttgc tgaacttcta
     1321 tataagctcg aatctgcgcc gtcaggcagt tctggaacag tttcttggta ccaacgggca
     1381 acgcattcct tacattatca gtattgctgg tagtgtcgcg gtggggaaaa gtacaaccgc
     1441 ccgtgtattg caggcgctat taagccgttg gccggaacat cgtcgtgttg aactgatcac
     1501 tacagatggc ttccttcacc ctaatcaggt tctgaaagaa cgtggtctga tgaagaagaa
     1561 aggcttcccg gaatcgtatg atatgcatcg cctggtgaag tttgtttccg atctcaagtc
     1621 cggcgtgcca aacgttacag cccctgttta ctcgcatctt atttatgatg tgatcccgga
     1681 tggagataaa actgttgttc agcctgatat tttaattctt gaagggttaa atgtcttaca
     1741 gagcggaatg gattatccac acgatccaca tcatgtattt gtttctgatt ttgtcgattt
     1801 ttcgatatat gttgatgcac cggaagactt acttcagacg tggtatatca accgtttcct
     1861 gaaattccgc gaaggggctt ttaccgaccc ggattcctat tttcataact acgcgaaatt
     1921 aactaaagaa gaagcgatta agactgccat gacattgtgg aaagagatca actggctgaa
     1981 cttaaagcaa aatattctac ctactcgtga gcgcgccagt ttaatcctga cgaaaagtgc
     2041 taatcatgcg gtagaagagg tcagactacg caaataattt gcaggggagc gaatactccc
     2101 ctttcttatt tttctgcact acgcagggat atttcaccgc ccatccaggg ttttattatt
     2161 ccatcctgct caagtaataa agccccctgt ttgtctattc cgcgtgaaat gccaaatatt
     2221 tctttatcac caatgataag tttcactggg cgattaataa aattatccag cttttcccag
     2281 cgcgacagat aaggtgccaa tccttcttgt tcgaagagtt ccaacgcagc acgtaattca
     2341 cgtattagca tggccgccaa cgtattacga tcgagattga tccccgcttc ctgcagcgtg
     2401 atccacccct gattaacgac actctcttca acacggcgca ttgccatgtt gatcccggct
     2461 ccaatgacta tttgcgccgc atcgccagtt ttgccagtca gctccacaag aatgcctgcc
     2521 agcttgcgat cctgcagata gaggtcatta ggccatttga cacgaacttt atctgctccc
     2581 agcttgcgta atacttccgc catcacgata ccgataacca gacttaaacc aatcgccgcc
     2641 gccgggcctt gttccagacg ccagaacatc gacaaatata agtttgcgcc aaaaggcgaa
     2701 aaccatttcc gcccccggcg accacggcca gcctgctggt attctgcaac acaggcatcg
     2761 cccgatttaa gctctccgat acgatcaaga aggtactgat tcgtggagtc aataactggc
     2821 agcacggcta cactaccgcc atccagctga cccaatatct gttcagcatt aagtaactgg
     2881 atgggctcag gcaggctgta tcctttaccc ggaacggtaa agacatcaac gccccagtca
     2941 cgcagtgtct gaatgtgttt attaatagcc gcccggctca ttcccagcgt ttcacccaac
     3001 tgctcgccag agtgaaattc accgttcgct aacagggcaa tcaatttcag tggcacggtg
     3061 ttatccttca tgaaattgtc tccactgcgc tcacttcacc tgatgcacca ataaagcgga
     3121 cttcaggctc aagccagaca ttaaattttt cacccacttt ttgtcttaca tggtgtgcca
     3181 gttgcaccac atcttcgctt tttgcattgt cttcattaat gagaactaac gcctgttgac
     3241 ggtgcaccgc agccccaccc atttgcatcc cttttagctg gcactgatca ataagccaac
     3301 ctgctgccag ttttactgaa ccacccgcct gggggtaatt tggtgctgtt ggaaattgcg
     3361 ccagtaatgc tttagccgtt tcggcagata caacagggtt tttgaagaaa ctaccggcat
     3421 tgccattcac ttttggatca gggagtttgg tggtgcgcat atgacacacc gcattaaata
     3481 cttgctgtgg cgttactgtt gtaggatcca gacgagttaa gtcaccatac gttagtacag
     3541 gttgccactc ttttagcaga cgcagaccta cggctacaat ggcgaagcga tcctggtatt
     3601 catgtttaaa aatactgtcg cgatagccaa aacggcactc tttggcagtt aagcgcactt
     3661 gcttgcctgt cgccagttca acacaatcaa cataagcgca aactcgctgt aattctacgc
     3721 cataagcacc aatattctgg ataggtgatg agccgacaca accaggaatt aatgccagat
     3781 tttccagacc aggcatacct tcctgcaaag tgtattttac caggcgatgc cagttttctc
     3841 cggctcctac atgtaaatac cacgcatcag gttcatcatg aatttcgata cctttgatcc
     3901 ggttgatgat caccgtgccg cgatagtctt ccagaaaaag tacattactt ccttcaccca
     3961 gaataagaac gggttgtcct tctgcggttg catactgcca ggcattgagt aattgttgtt
     4021 cgtcttcggc acatacaatg tgctgagcat tatgatcaat gccaaatgtg ttccagggtt
     4081 ttaaggagtg gttcatagct gctttcctga tgcaaaaacg aggctagttt accgtatctg
     4141 tggggggatg gcttgtagtt atgacgacag ggagagtttg tag
//
LOCUS       DADMJE010000231         4127 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.234, whole genome shotgun sequence.
ACCESSION   DADMJE010000231 DADMJE010000000
VERSION     DADMJE010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4127)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4127)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4127
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.234"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(37..594)
                     /gene="ymfL"
                     /locus_tag="JN001_003925"
     CDS             complement(37..594)
                     /gene="ymfL"
                     /locus_tag="JN001_003925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415665.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YmfL"
                     /protein_id="HAY9054973.1"
                     /translation="MGKHHWKIEKQPEWYVKAVRKTIAKLPGGYAEAADWLDVTENAL
                     FNRLRADGDQIFPLGWAMVLQRAGGTHFIADAVAQSANGVFVSLPDIEDVDNADINQR
                     LLEVIEQIGSYSKQIRSAIEDGVVEPHEKTAINDELYLSISKLQEHAALVYKIFCISE
                     SNDARECAAPGVVASIASGCGETNA"
     gene            complement(638..838)
                     /locus_tag="JN001_003926"
     CDS             complement(638..838)
                     /locus_tag="JN001_003926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415664.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9054974.1"
                     /translation="MKAYWDSLTKEQQGELAGKVGSTQGYLRLVFNGYKKASFVLAKK
                     LEQCTSGAITKSDLRPDIYPKD"
     gene            929..1603
                     /locus_tag="JN001_003927"
     CDS             929..1603
                     /locus_tag="JN001_003927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HAY9054975.1"
                     /translation="MKTIHDIRRSNARKLRDGVGGNSSFATMIDREPTQTSRFMGDGA
                     TKNIGDSMARHIEKCFDLPIGWLDQEHQTTNITKKPEVSITNKQITLVPVISWVQAGA
                     WKEVGYSEVDLSTAETYPCPVPCGEMTYILRVIGDSMIDEYRPGDMIFVDPEVPACHG
                     DDVIALMHDTGETTFKRLIEDGTQRYLKALHPNWPEPYIKINGNCSIIGTVIFSGKPR
                     RYKIKA"
     gene            3132..3668
                     /locus_tag="JN001_003928"
     CDS             3132..3668
                     /locus_tag="JN001_003928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416862.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD family hydrolase"
                     /protein_id="HAY9054976.1"
                     /translation="MSFIQTLTGKKFNYINSTIDDIYIEDIAGALSNICRFAGHLPDF
                     YSVAQHSVLCSQLVAPEFAFEALMHDATEAYCQDIPAQLKRLLPDYKRMEEKIDAVIR
                     EKYGLPPVMSTPVKYADLIMLATERRDLGLDDGSFWPLLEGIPATEMFKVIPLSPGHA
                     YGMFMERFNELSELRKCA"
     gene            3659..4021
                     /locus_tag="JN001_003929"
     CDS             3659..4021
                     /locus_tag="JN001_003929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF551 domain-containing protein"
                     /protein_id="HAY9054977.1"
                     /translation="MRMNVFEMEGFLRGKCVPRDLKVNETDAEYLVRKFDALEAKCAA
                     LENKVIPVSTELPPANESVLLFDANGEGWLIGWRSLWYTWGQKETGDWQWTFQVGDLE
                     NVNITHWAVMPKAPEAGA"
BASE COUNT         1256 a          898 c          877 g         1096 t
ORIGIN      
        1 tcagttgcga gcgacggtag tgtgttgtta aactgttcat gcgttagttt ctccacaacc
       61 agaagcaatc gacgccacga cgcccggagc tgcacactcg cgggcgtcat tactttctga
      121 aatgcaaaaa attttgtaga caagtgctgc atgctcctgc agcttcgaaa ttgagagata
      181 cagctcgtcg ttaattgctg tcttctcatg cggttccact acaccgtctt cgattgctga
      241 acgaatctgt tttgaataac tgccgatctg ttcaatgact tccagcagac gctggttaat
      301 atcggcgttg tccacatcct cgatgtcagg aagagacaca aagacgccat ttgcagactg
      361 cgccacagca tcagcaatga agtgagtgcc accagcacgc tgtaaaacca ttgcccatcc
      421 cagcgggaaa atctgatcgc catctgcacg aaggcggttg aataaagcgt tttctgttac
      481 atcgagccag tcagccgctt cagcgtaacc acccggcaac tttgcgatag tttttctgac
      541 agctttcacg taccactcag gctgtttttc tattttccag tgatgcttac ccacgattag
      601 cctcatcgtt ctgtggttaa aaattgaaag tgttctgcta atctttcgga tagatatccg
      661 gtcttaagtc agatttcgta attgcacctg acgtgcattg ctcaagtttt ttagccagca
      721 caaaactggc ttttttatag ccattgaaaa ccagccgtaa gtagccttgt gttgagccaa
      781 cttttccggc caactcaccc tgctgttctt tggttaaaga gtcccaatac gctttcatac
      841 aatatgtacc tccagtgtac acatcacatg attgaaatga accttcaaga tacttgtacc
      901 ttagcggtac aagggtttta atttcgttat gaaaacaatc catgacatcc ggcggtctaa
      961 cgccagaaaa ctgagagatg gtgttggcgg gaattcttcc tttgccacta tgattgatcg
     1021 cgagccaacc cagaccagca ggtttatggg agatggtgct actaaaaata tcggtgacag
     1081 catggcacga cacattgaaa aatgtttcga cctgcctatc ggatggctcg atcaagaaca
     1141 ccagacaacg aacatcacaa aaaaacctga agtttcaatc actaacaaac aaataacgtt
     1201 agtccctgtc atatcatggg tacaggccgg agcatggaaa gaagttggct attctgaggt
     1261 tgatttgagc acagcagaaa cttatccctg ccctgtaccc tgtggcgaaa tgacttatat
     1321 cttgcgggtg attggtgatt caatgattga tgagtaccgt ccgggagaca tgatttttgt
     1381 tgatcctgaa gtccctgctt gccacggtga cgacgttatt gcgttgatgc acgatacagg
     1441 cgaaaccacc ttcaagcgat tgatagaaga tggaacacag cgttatctca aagcattaca
     1501 cccaaactgg cctgagccct acattaagat taacggtaat tgctctataa ttggcactgt
     1561 gattttctcg ggaaaaccaa gaagatacaa aataaaggcc taatcaatat ttatgaacct
     1621 gcttcggcag gtttttttat acttgacaat gtaccccatg gacacacaat gtaccccatg
     1681 gacacacaat gtaccaaaac gaaacaacaa acaggcagga tgcccacgaa gtagccgcct
     1741 ggggcatatg aagtccaaga tgattcgtta gcaacaaaac gcccatagga cgcttcgctc
     1801 tttaacaatt tgaatatttt cagcgtcaat gatctgttta gctccctaca agtaaatgta
     1861 gcgtagcacc atgataaatc ctgctagtgt ttagttaaaa atcgcgcgag agcaagaacg
     1921 acgtgagggc aggcaatact gatagtgtta ttgctattag tttatcaaaa atatttagac
     1981 gacccagatg aatattttta atacatactc cccctaattt aacaggagta aatgttgatg
     2041 aataacgaga catctatact caacaattgt atgatatgaa caattatata acataatgta
     2101 ggaaaaataa aaatggattg gcatgacctt atatcaaagg taattatcgg acttgttaca
     2161 ggctcaatcg cagcttactt aactgcgcga tatgcactcg gccgttatta taaagaaaaa
     2221 tggtgggaca aaagaataga tttgtatacg taattagttg actgtgttta tcttctaaaa
     2281 aacacagctg actattggta taaacatgag ttacatcacg cttcacaatt cccaacctac
     2341 tttagttaca aatcaaaaga agaaaatgaa atccttagca aatctttctc taatgagctt
     2401 gaaaaactca gtagaatagg tgagctatct tcattattct taacagaaga gtgtggggat
     2461 aaaatccgtt cattcattga aaatgaagaa aatctattta tacaatgggt gtttgatagt
     2521 atagagttga tagatgccca caagtcaaga cttgataaat taaaagtatt actagacgat
     2581 attatctctg aagcaaagag agagcttaag gtcaataaaa aacataacag cctaaagaat
     2641 ataaagtggt ccataactat gccagaccaa aaaaatgatg agccaattaa ttatcacgac
     2701 aatcattaaa acactttaga acccgctggg cgggttctat tcaaatatac tttgcacatc
     2761 acaaataaaa ctataacgtc cttcttcttt tcctaatatc ttatatctac ttatttataa
     2821 gcggcttaca gatcttcaac agataaacct aatgaaggcg acaatgttct gatgaatagc
     2881 caccttttta ctcaactgaa agcgcgttct gtcccttgtc attaagtgcc agttcgttaa
     2941 gtccaaaacc tccggaacgc gctttcaatt gagtggggaa aataactggc gatggcagcc
     3001 gcccgttgca ctaagtgcct ctggatgggg catttactga aacgaaacca aaacttttaa
     3061 tcgccttatg gcgagggatt cgtgcaacca aaaatcgtgc ggtgcagcgc accaattaag
     3121 gagaactaac gatgagtttt atccagactc ttaccggtaa gaagttcaat tatatcaact
     3181 ccaccattga cgatatttat atcgaggata tcgccggtgc gctttcaaat atctgccgct
     3241 tcgcgggaca cttgccggat ttttacagcg tggcgcagca ttccgttctg tgcagtcaac
     3301 ttgtggcgcc agagttcgcc tttgaagcgt taatgcatga tgcaacagaa gcgtattgtc
     3361 aggacatccc cgcgcaactg aaacgccttc ttcctgacta taaacggatg gaagaaaaaa
     3421 tagacgccgt aatccgtgag aaatacgggt tacccccggt tatgagcacg cccgtgaaat
     3481 atgccgatct catcatgctg gcaaccgaac gccgcgatct tgggcttgat gatggctctt
     3541 tctggcctct actagaaggt atcccagcaa cagagatgtt caaagttatt ccactgtcgc
     3601 caggccatgc ctacgggatg tttatggaac gttttaacga attatcggag ttacgcaaat
     3661 gcgcatgaat gttttcgaaa tggaagggtt tcttcgcggg aaatgtgtac cgcgagatct
     3721 gaaagtgaat gaaacggatg ctgaatacct ggtgcgtaaa ttcgatgcgc ttgaagctaa
     3781 atgtgcggca ctggaaaaca aagtaatacc agtgtcaact gaactgccac cagcaaatga
     3841 aagtgttttg ttattcgatg ctaacggaga aggctggcta attggctggc gttctctctg
     3901 gtacacctgg ggacaaaaag aaaccggaga ctggcagtgg acatttcagg tcggggacct
     3961 tgaaaacgtc aatatcactc actgggcagt aatgccaaaa gcaccggagg ctggagcata
     4021 atgaccactt ttaccgacaa agaactgatt aaagaaatta aagagcgtat cagcagcctt
     4081 gacgtgcgag acgatattga gcgccgtgct tatgaaatcg cactcct
//
LOCUS       DADMJE010000232         4108 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.235, whole genome shotgun sequence.
ACCESSION   DADMJE010000232 DADMJE010000000
VERSION     DADMJE010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4108
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.235"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..164
                     /gene="mbeD"
                     /locus_tag="JN001_003930"
     CDS             <1..164
                     /gene="mbeD"
                     /locus_tag="JN001_003930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000137445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MbeD family mobilization/exclusion protein"
                     /protein_id="HAY9054978.1"
                     /translation="EWESAFVELQKMFSLTQRDNAMLNEQVMQLSQQVQHLSERTERL
                     SQLYSENRR"
     gene            complement(712..1179)
                     /locus_tag="JN001_003931"
     CDS             complement(712..1179)
                     /locus_tag="JN001_003931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014526575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9054979.1"
                     /translation="MRIDISHQTRHTPPNMLPREQNCVAMALSACFRQQLNPVVNSLL
                     KERIIHSPKELEHDNAVIRALQKLQIQEVCNSTLWETAKQQLLQKSDGRYFAINSKHL
                     AFPGPGESHAFCCIKYKNAIGINGNNAETQSTHYQPYPYDKVSIWGPFPHNLT"
     gene            complement(2248..2439)
                     /locus_tag="JN001_003932"
     CDS             complement(2248..2439)
                     /locus_tag="JN001_003932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000165975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY9054980.1"
                     /translation="MTKQEKTALNMARFIRSQTLTLLEKLNELDADEQADICESLHDH
                     ADELYRSCLARFGDDGETR"
     gene            2504..2827
                     /locus_tag="JN001_003933"
     CDS             2504..2827
                     /locus_tag="JN001_003933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000956000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MobC family plasmid mobilization relaxosome
                     protein"
                     /protein_id="HAY9054981.1"
                     /translation="MLTIRVTDDEHARLLERCEGKQLAVWMRRVFLGEPVARSGRLPT
                     LAPPLLRQLAAIGNNLNQTARKVNSGQWSSGDRVQVVAALMAIGDELRRLRLAVREQG
                     TRDDS"
     gene            2817..>4108
                     /locus_tag="JN001_003934"
     CDS             2817..>4108
                     /locus_tag="JN001_003934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001557251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HAY9054982.1"
                     /translation="MIVKFHARGKGGGSGPVDYLLGRERNREGATVLQGNPEEVRELI
                     DATPFAKKYTSGVLSFAEKALPAGGREKVMASFERVLMPGLEKNQYSILWVEHQDKGR
                     LELNFVIPNMELQTGKRLQPYYDRADRSRIDAWQTLVNHHYGLHDPNAPENRRTLTLP
                     DNLPETKQALAESITRGIDALYHVGEIKDRQDVIQALTEAGLEVVRVTRSSISIADPN
                     GGKNIRLKGAFYEQSFTDGRGVREKAERESRIYRENAERRVQEARRICKQGCDIKRDE
                     NQRRYSPVHSFDRGITEKTPGRGERGDDAAQEGRVKAGREYGHDVAGDGYFPVYREWR
                     DALVSWRDDTGEPGRNQEAERESGEAEREDMGRALSRGEQRTFSGVARGDESRNELDD
                     GKRETECRKAGTGVTEHDGAGKTFAERIRATATGLYAAA"
BASE COUNT          982 a          934 c         1225 g          967 t
ORIGIN      
        1 acgaatggga gagcgccttc gtggaattgc agaaaatgtt ttcgcttacg caacgggaca
       61 acgcgatgct gaacgagcag gtcatgcagt tgagtcagca ggtgcagcac ttgagcgagc
      121 ggacagaacg cttgagccag ttatacagcg agaacaggag ataagggacg aacggctgat
      181 acaggaatgc gaacatgagt tatccctgga gcgtgagcgc cagccggaaa tacaggaacg
      241 cacactggat ggtccttcac tgggatggta atcagagaca ggctaaaatg ttgtcagcgc
      301 gtttccggtg cattttttgg gataatggtt ggttcggggg ggcaccggga acgcgcttca
      361 gtcagacctt gctgaaaaca caggaacgcg ttaaaacgca tacgggcgcg attctggtgt
      421 gtcttttgtt gctgtgtttt gcctctattg ccagatcgcg ctcattcccc tgaacttctg
      481 ttttcccgct caggtccccg tcttcttcgc ttccgaaagc atgaaaaaaa tccgtttcag
      541 ctgtctctgg ctggcaattc ctgcgtgatt cacatggctg catagctatg catgtggtta
      601 aaatttaccg ggtgcgatcg cggcagtttt tcgggtggtt tgttgccatt tttacctgtc
      661 tgctgccgtg atcgcgccga acgcgtttca gcggtgcgta caattaagat attacgttaa
      721 attgtgaggg aatggtcccc atatactgac tttatcatag ggatagggtt ggtagtgggt
      781 cgattgggtt tcggcattgt ttccgttaat gccaattgca tttttgtatt tgatgcaaca
      841 gaaggcgtga gattctcctg ggcctggaaa ggctaagtgt ttagaattga tggcaaaata
      901 tcttccgtcc gatttttgaa gtagttgttg tttggctgtc tcccaaaggg tgctgttaca
      961 aacttcttga atttgtagtt tttgcagggc tcttattact gcgttgtcat gttccaattc
     1021 tttaggggag tgtattattc tctcttttaa taagctgttt accacagggt ttagttgttg
     1081 tctaaagcac gcagataatg ccattgctac acaattttgt tcccgaggaa gcatgtttgg
     1141 cggggtatgc cgtgtttgat gtgatatgtc tattctcata gaaggtctct ggcttatagc
     1201 atcaacaaat acggctataa aacaaaattt tcatagagtg attcaagatc ttcttgagat
     1261 ccttttttgc ggcgcgtaat ctgctgcctg caaacaaaaa aaccaccgct accaacggtg
     1321 gtttgtttgc cggaatctag agctaccaac tctttcttcc gaaggtaact ggcttggtgg
     1381 agcacagata ccaaatgctg tccttctagt gtagccgcag ttaggccacc acttcaagaa
     1441 ctcttaatat ctcaatccac cttgtacagt taccaatggc tgctgccagt ggcgttaagt
     1501 cgtgtcttac cgggttggac tcaagacgat agttaccgga tgaggcgcag cggtcgggct
     1561 gaacgggggg ttcgtgcaca cagcccagct tggagcgaac gacctacacc gaactgagat
     1621 acctacagcg tgagctatga gaaagcgcca cgcttcccga agggagaaag gcggacaggt
     1681 atccggtaag cggcagggtc ggaacaggag agcgcacgag ggagcttcca gggggaaacg
     1741 cctggtatct ttatagtcct gtcgggtttc gccacctctg actagagcgt cgatttttgt
     1801 gatgctcgtc aggggggcgg agcctatgga aaaacgccat cggcgcggcc ttcttcctgt
     1861 tcctggtctt ttgctcacat gttctttccg gcgttatccc ctgattctgt ggataacagc
     1921 atttcgtttt tgagtgagta gataccgctc gccgcagtcg aacgaccgag cgtagcgagt
     1981 cagtgagcga ggaagcggaa aagcgcctgg acgtgcattt tctccttacg catctgtgcg
     2041 gcatttcaca cccggtatgg cgcacttttc atacaatccg cactgatgcc gcatggtgaa
     2101 gccagtatac actccgctat cgctacgtga ctgggtcatg gctgcgcccc gacacccgct
     2161 aaaacccgct gacgcgccct gacgggcttg tctgctcccg gcatccgctc acagataagc
     2221 tgtgaccgtc tccgggagct gcatgcgtca gcgggtttca ccgtcatccc cgaagcgagc
     2281 gaggcaactg cggtaaagct catcggcgtg gtcgtgaagc gattcacaga tgtctgcctg
     2341 ttcatccgcg tccagttcgt tgagcttctc cagcagcgtt aatgtctggc ttctgataaa
     2401 gcgggccatg ttaagggcgg ttttttcctg tttagtcact gatgcctccg tgtaaggggg
     2461 atttctgttc atgggggtaa tgataccgat gaaacgcgag aggatgctca cgatacgggt
     2521 tactgatgat gaacatgctc gtttgctgga acgttgtgag ggtaaacaac tggcggtatg
     2581 gatgcggcgg gtcttcctgg gggagccggt tgcccgttcc gggaggctgc cgacactggc
     2641 accgccgtta ctgcgtcagc tggccgccat cgggaataac ctgaatcaga cagcgaggaa
     2701 ggtgaacagc gggcagtggt cttccggtga ccgggttcag gtggtggccg cactgatggc
     2761 catcggggat gagctgcgcc ggctgcgtct ggccgtcagg gaacagggga cgcgggatga
     2821 tagttaagtt tcatgccagg ggaaaaggtg gtggcagtgg tccggttgat tacctgctgg
     2881 gaagggagcg taaccgggaa ggggcaacgg tgcttcaggg taatccggaa gaagtccggg
     2941 aactcatcga tgccacgcca tttgcgaaga aatacacgtc cggtgttctc tcgttcgcgg
     3001 agaaggcgct gccagcggga ggacgtgaaa aagtgatggc gagttttgag cgtgtactga
     3061 tgcccggtct cgaaaaaaat cagtacagca tcctgtgggt ggagcaccag gacaagggac
     3121 ggcttgagct gaattttgtc attccgaaca tggagctaca gaccggaaaa cgcctccagc
     3181 cgtactacga ccgggcagac aggtcgagaa ttgatgcctg gcagacgctg gtgaatcacc
     3241 attacgggct gcatgacccg aacgccccgg agaaccgccg gacgctgact ctccctgata
     3301 acctgccgga aacgaaacag gcgcttgctg agagcattac acgggggata gacgctcttt
     3361 atcatgtcgg ggagataaaa gaccgtcagg atgtgattca ggcgctcaca gaggcggggc
     3421 ttgaagtggt cagggtgacg cgaagcagta tcagcattgc agacccgaac ggcgggaaga
     3481 atatcagact gaaaggagca ttctatgagc aatcttttac agacgggcgc ggagttcgag
     3541 aaaaagctga aagagagagc cgaatctaca gagaaaatgc tgaacgacga gttcaggaag
     3601 ctcgaagaat ctgtaagcaa ggctgtgaca tcaaacgaga cgaaaatcaa agacgctata
     3661 gccctgttca cagcttcgac agaggaatca ctgaaaaaac accgggaagg ggtgaaagag
     3721 gcgatgatgc agcacaggaa ggacgtgtta aagctggcag ggaatacggg catgatgttg
     3781 ctggggatgg ttattttcct gtttaccgtg agtggcggga cgctctggta tcttggcggg
     3841 atgatacagg cgaacctgga agaaatcagg aagcagaacg agagtctgga gaagctgaac
     3901 gcgaagacat ggggcgtgcg ttatcacgag gggagcaacg gacgttttct ggtgttgccc
     3961 gaggggatga aagccgaaac gaactggacg atggaaaacg ggaaacagaa tgccgtaagg
     4021 ctggtacagg agtaacagag catgacggag ctggaaagac atttgctgaa cgcattagag
     4081 caactgcaac aggactatat gcagcggc
//
LOCUS       DADMJE010000233         4080 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.236, whole genome shotgun sequence.
ACCESSION   DADMJE010000233 DADMJE010000000
VERSION     DADMJE010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4080)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4080)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4080
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.236"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            32..931
                     /locus_tag="JN001_003935"
     CDS             32..931
                     /locus_tag="JN001_003935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9054983.1"
                     /translation="MKREEIADLMAFVVVAEERSFTRAAARLSMAQSALSQIVRRIEE
                     RLGLRLLTRTTRSVVPTEAGEHLLSVLGPMLHDIDSALASLSELQNRPSGTIRITTVE
                     HAAKTILLPAMRTFLKSHPEIDIQLTIDYGLTDVVSERFDAGVRLGGEMDKDMIAIRI
                     GPDIPMAIVGSPDYFSRRSVPTSVSQLIDHQAINLYLPTSGTANRWRLIRGGREVRVR
                     MEGQLLLNTIDLIIDAAIDGHGLAYLPYDQVERAIKEKKLIRVLDKFTPDLPGYHLYY
                     PHRRHAGSAFSLFIDRLKYKGAV"
     gene            1268..2881
                     /locus_tag="JN001_003936"
     CDS             1268..2881
                     /locus_tag="JN001_003936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415845.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HAY9054984.1"
                     /translation="MKHSVSVTCCALLVSSISLSYAAEVPSGTVLAEKQELVRHIKDE
                     PASLDPAKAVGLPEIQVIRDLFEGLVNQNEKGEIVPGVATQWKSNDNRIWTFTLRDNA
                     KWADGTPVTAQDFVYSWQRLVDPKTLSPFAWFAALAGINNAQAIIDGKATPDQLGVTA
                     VDAHTLKIQLDKPLPWFVNLTANFAFFPVQKANVESGKEWTKPGNLIGNGAYVLKERV
                     VNEKLVVVPNTHYWDNAKTVLQKVTFLPINQESAATKRYLAGDIDITESFPKNMYQKL
                     LKDIPGQVYTPPQLGTYYYAFNTQKGPTADQRVRLALSMTIDRRLMTEKVLGTGEKPA
                     WHFTPDVTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQKPLKLTLLYNTSENHQ
                     KIAIAVASMWKKNLGVDVKLQNQEWKTYIDSRNTGNFDVIRASWVGDYNEPSTFLTLL
                     TSTHSGNISRFNNPAYDKVLAQASTENTVKARNADYNAAEKILMEQAPIAPIYQYTNG
                     RLIKPWLKGYPINNPEDVAYSRIMYIVKH"
     gene            complement(2932..3963)
                     /gene="ynaI"
                     /locus_tag="JN001_003937"
     CDS             complement(2932..3963)
                     /gene="ynaI"
                     /locus_tag="JN001_003937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low conductance mechanosensitive channel YnaI"
                     /protein_id="HAY9054985.1"
                     /translation="MIAELFTNNALNLVIIFGSCAALILMSFWFRRGNRKRKGFLFHA
                     VQFLIYTIIISAVGSIINYVIENYKLKFITPGVIDFICTSLIAVILTIKLFLLINQFE
                     KQQIKKGRDITSARIMSRIIKITIIVVLVLLYGEHFGMSLSGLLTFGGIGGLAVGMAG
                     KDILSNFFSGIMLYFDRPFSIGDWIRSPDRNIEGTVAEIGWRITKITTFDNRPLYVPN
                     SLFSSISVENPGRMTNRRITTTIGLRYEDAAKVGVIVEAVREMLKNHPAIDQRQTLLV
                     YFNQFADSSLNIMVYCFTKTTVWAEWLAAQQDVYLKIIDIVQSHGADFAFPSQTLYMD
                     NITPPEQGR"
BASE COUNT         1145 a          896 c          961 g         1078 t
ORIGIN      
        1 aaatgattaa tagattgcat ggagatactg aatgaagcgt gaagaaatcg ctgatctgat
       61 ggcgtttgtc gtcgttgcag aggagcgtag cttcactcgt gcagcagccc gcctgagcat
      121 ggcgcagtca gctttaagcc agatagtgcg tcgtatagaa gaacgattgg gattgcggct
      181 tctgacgcga accacgcgca gcgttgttcc aactgaagcg ggcgagcatc ttttgtctgt
      241 tcttggccct atgttgcatg acatagattc agccctggca tccctgagcg agctgcagaa
      301 ccgcccatcc gggacaatac gtattactac tgtagaacat gcagcaaaaa cgatattgtt
      361 accagcaatg cgcacattcc tgaaatcgca tcctgaaatt gatattcagc tcaccattga
      421 ttatggtttg accgatgtcg tttctgaacg ttttgatgca ggcgtccgtc tgggtgggga
      481 gatggataaa gatatgatcg ccattcgaat cgggccagat ataccaatgg ctattgttgg
      541 ctcaccggat tatttttctc gccgaagtgt tccaacgtca gtgtcacaat taatagatca
      601 tcaggcaatt aatttgtatc ttcccacatc gggtacagca aatcgctgga gattaatacg
      661 cggtggacgt gaagttcgtg ttcgcatgga aggtcagctt ttactgaata cgatagacct
      721 gatcattgat gctgcaattg atgggcatgg attggcgtat ctaccttatg atcaggttga
      781 gcgggctatt aaagaaaaaa aactgatacg tgttttggat aaattcacac cagatttacc
      841 cggttatcac ctgtactatc cacaccgtcg acatgctggc tcggcattct cattatttat
      901 agataggctg aagtataaag gtgctgttta gcactacttg ctgatacatt aatttaattt
      961 ctctcttaac gtattctcag ttcctttcaa cgttttggtt attttttatt cttcgtacaa
     1021 tggcgacaga tgctgatttt gataccgaaa actggtttga acgtgcgaag cctgaacgta
     1081 gtattcggtg ttctatgtgc tttgccgcat tttggcgtcg attatttaca ctaaatctga
     1141 tttaatatat tgatacataa aacattttat gcttcctgtg tcactttttt gatggaagtt
     1201 gtttgcattt ctttaaggcg aaacaaataa ttacgcatca attttaatgt cggttagagg
     1261 gaaacttatg aagcactctg tttcagtcac gtgttgtgcg ctgttggtca gcagcatttc
     1321 tctttcgtat gctgcagaag ttccgagcgg cacagtactg gcagagaagc aggagctggt
     1381 gcgccacatt aaagatgagc ctgcgtcgct ggatcccgct aaagccgtgg gcctgccaga
     1441 gattcaggtc attcgcgatc tgtttgaagg actggtgaat cagaacgaga aaggggagat
     1501 tgtccccggc gttgcgactc agtggaaaag taatgacaac cgtatctgga cttttaccct
     1561 gcgcgataac gcaaaatggg cggatggcac accggtaacg gcgcaagatt ttgtctacag
     1621 ctggcagcgt ctggtggacc cgaaaacgct atcgccattt gcatggtttg ccgcgctggc
     1681 gggaatcaac aacgcacagg cgattattga tggtaaagct acgcctgacc agcttggcgt
     1741 caccgcagtt gatgcccata ccttgaaaat tcagcttgat aaaccgttgc cgtggtttgt
     1801 gaatttaacc gctaactttg ccttcttccc ggtgcaaaaa gccaacgtag aaagcggtaa
     1861 agagtggacg aaacccggaa atctgatcgg caatggcgct tatgttctta aagaacgcgt
     1921 agtcaatgaa aaactggtcg tggtaccgaa tacccattat tgggataacg ccaaaacggt
     1981 actgcaaaaa gtgaccttcc tgccaattaa tcaggaatcc gcagccacta agcgttacct
     2041 cgcgggggat attgatatca ccgaatcctt cccgaaaaat atgtatcaga agctgttgaa
     2101 ggatattccg gggcaggttt atacgccgcc gcagctcggg acctattatt atgcgtttaa
     2161 cacgcaaaaa gggccgacgg cagatcagcg cgttcgcctg gcattaagta tgacgataga
     2221 tcgccgcctg atgaccgaaa aagtgttggg aacgggcgaa aagccagcgt ggcattttac
     2281 accagatgtt accgccggat ttacgccgga accttcgccg tttgaacaaa tgagtcagga
     2341 agaactgaat gcgcaggcaa aaactttgtt gagcgcagct ggttatggtc cgcaaaaacc
     2401 gctgaagctg acgcttttgt ataacacttc agaaaaccat caaaaaattg cgattgctgt
     2461 agcatcgatg tggaaaaaga accttggcgt agatgttaaa ttgcaaaatc aggaatggaa
     2521 aacctatatc gatagccgta acaccggcaa ttttgatgtt atccgcgcct catgggtggg
     2581 ggattataat gaaccctcca ctttcctgac attattaacg tcaacgcatt caggaaatat
     2641 ttcacgcttt aacaatccgg catacgacaa agttctggcc caggcatcga cggaaaatac
     2701 cgttaaagcg cgtaatgccg attacaacgc ggcagaaaaa atcctcatgg agcaagcacc
     2761 gattgcacca atttatcaat ataccaatgg acgattaatc aagccgtggc tgaaaggtta
     2821 tcccattaat aacccggaag atgtggcgta cagccggatt atgtatattg tgaagcattg
     2881 atgtgatggg aactggcgtt acccttgtgg ataacgccag tgatgtctga tttagcgccc
     2941 ctgttccggc ggtgtaatgt tatccatata cagcgtctgg ctggggaagg caaagtccgc
     3001 gccgtgtgac tgcacaatat cgataatctt caaataaacg tcttgttgtg cagcaagcca
     3061 ttcagcccat accgtggttt tggtaaagca ataaaccata atattcaatg acgagtcggc
     3121 aaactggttg aaataaacca gtaaggtttg tcgctggtcg atggccgggt gatttttcag
     3181 catctcacgt acggcttcga caataacgcc cacttttgcc gcatcctcat aacgtaaacc
     3241 aatggtcgtg gtaatgcggc ggttggtcat tcgtcctggg ttttctacgc tgatcgacga
     3301 aaacagcgag ttcggtacgt acaatggacg attatcaaag gtcgtaattt tggtaattcg
     3361 ccagccaatt tccgctactg taccttcgat atttctgtcc ggtgaacgga tccagtcgcc
     3421 aatactgaaa ggacggtcga aatagagcat gatcccggaa aagaaattac tcagaatatc
     3481 tttaccggcc ataccgacag ccagaccacc aataccacca aaggtcagca agccagaaag
     3541 gctcatgccg aaatgttcgc cataaagcag aacaagcacc acaataatgg tgattttgat
     3601 aatgcgcgac ataatccgcg cactggtgat atcgcgacct tttttaatct gctgtttttc
     3661 aaactgatta atcagcaaaa atagcttaat cgtcagaata accgcaatca gggacgtaca
     3721 gataaaatcg ataacgcctg gggtgataaa tttgagttta tagttttcta taacataatt
     3781 aataatgcta ccaacagcac tgataattat ggtgtagatt aaaaattgca ccgcatggaa
     3841 taaaaaacct tttcttttac gatttccgcg gcgaaaccaa aagctcatca gaatcaatgc
     3901 tgcgcagcta ccgaaaataa tgaccagatt aagcgcatta tttgtaaaca gttcagcgat
     3961 cattgtttta tcaggctcct ccagataatt gtcgtcatgc cggaaccccc tggcggggct
     4021 attttaccgc gacaattcat tcagatcatc aatagtcagg gaaggaagta gcaacattag
//
LOCUS       DADMJE010000234         4070 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.237, whole genome shotgun sequence.
ACCESSION   DADMJE010000234 DADMJE010000000
VERSION     DADMJE010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 4070)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4070)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4070
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.237"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1046)
                     /locus_tag="JN001_003938"
     CDS             complement(<1..1046)
                     /locus_tag="JN001_003938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708400.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion protein"
                     /protein_id="HAY9054986.1"
                     /translation="MREINMLRNISSCLFPHISKITSPNHYLSEWDDWEKQGLPEEQR
                     TEAVRRLRACLTSKGHKLDLRALALSSLPVLPACIKKLDVSCNKLTILTDLPENIKEL
                     IARDNFLTHISALPHYLITLDVSENQLENLPLLPDTIKSLSAEYNRLSTLPSLPLNLK
                     KLEVRNNELQTLPSLPSNLKILKVAHNHLTELPPLPRRLQLLFAYSNRLSNLPNIQEN
                     IIMRRFFYFENNQITTIPTNLFRLDPHITIEIANNPLSDQTLLFLIQQTSVPNFNGPQ
                     FRISLSDQNRLFLRQMLPQNLHSRHIRVITEGGQNFQIPPLPETVAAWFPEADRREVS
                     TQWTSFSTEENSRA"
     gene            1537..1647
                     /locus_tag="JN001_003939"
     CDS             1537..1647
                     /locus_tag="JN001_003939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001344347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA invertase"
                     /protein_id="HAY9054987.1"
                     /translation="MLIGYVRVSTNDQNTDLRRNALNCAGYELIVERMGA"
     gene            1927..2922
                     /gene="pgl"
                     /locus_tag="JN001_003940"
     CDS             1927..2922
                     /gene="pgl"
                     /locus_tag="JN001_003940"
                     /EC_number="3.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphogluconolactonase"
                     /protein_id="HAY9054988.1"
                     /translation="MKQTVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVS
                     PDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSPTHISTDHQGQFVFVGSYN
                     AGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDG
                     HLVAQDPAEVTTIEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTL
                     DMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ
                     PRGFNVDHSGKYLIAAGQKSHLISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH"
     gene            complement(2963..3915)
                     /locus_tag="JN001_003941"
                     /pseudo
     CDS             complement(2963..3915)
                     /locus_tag="JN001_003941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308823.3"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
BASE COUNT         1091 a          830 c          952 g         1197 t
ORIGIN      
        1 aatgcccggg aattctcctc ggtggaaaaa gaagtccatt gtgtagaaac ctcccgacga
       61 tctgcttcag gaaaccaggc tgccacagtt tcgggaagag gggggatctg aaagttctgc
      121 cccccttcag tgatgactct gatatggcgc gaatgtaaat tttgcggcaa catctggcgt
      181 aaaaacagtc tgttttggtc tgacagggaa atacgaaact gaggcccgtt aaaatttgga
      241 accgaagttt gctgtattaa gaatagcaga gtttgatctg ataaggggtt atttgcaatc
      301 tcaatagtta tatgaggatc taaacgaaaa agatttgtcg ggattgtagt tatttggttg
      361 ttttcaaaat aaaaaaatct tctcatgata atattttctt ggatgtttgg taagttgctt
      421 aatctattgc tatatgcaaa aagaagttgc agtctcctag gtaaaggggg cagttcagta
      481 agatggttgt gcgcaacctt aagtatctta agattagaag gcagagatgg aagagtttgc
      541 agttcgttgt tcctaacctc aagttttttt aaattcaagg gtaatgaagg cagtgtggat
      601 aacctattat actctgcgct tagtgatttg atggtgtctg gtaataacgg cagattctct
      661 aattgatttt cggacacatc caaagttatt agataatgtg gtaatgcaga tatatgtgtt
      721 aagaaattat ctcttgcaat aagttcttta atattttcag gtaaatcagt aaggatggtt
      781 aatttattac agctcacatc aagcttttta atgcaagcag ggagtacagg taacgaggaa
      841 agcgccaagg ctcgcaggtc cagtttatgc cccttagagg taagacatgc acgaagtctt
      901 cttaccgcct cagtacgctg ttcttccggt aacccctgtt tctcccaatc atcccattcg
      961 gacaaataat ggttggggga tgtaattttg ctgatatgtg gaaataaaca ggatgaaata
     1021 tttctgagca tattaatttc tcgcatatgg atatggaatt agattgtgaa taaattgtat
     1081 ttaatgtatc tctcctaatg aggagggtgt ttcagaatat tcgccataag ggaatgagtg
     1141 ttatatcatg ctttctatcc tggtaagtat atttgctttt ttcgtatatt tggttcatct
     1201 ttttttgatg ttttacatat tcacaatgca gaggatttat accagaagac attagtcttg
     1261 agtaagatac tacaacatct ccaactattt tagccagcct gactacttga cttggtaata
     1321 tttgttgcta ataatcatgt ataaaataag cttatataca tagtaacttc agcaaaggat
     1381 ttagtaatga tccaaatcat atatcaatgt actgtttttt tctttaaaaa aacagtacat
     1441 tctattttat aatgactgtg tattcccatg gaaggagatc acccaattct cccccccgac
     1501 ttttgacgca gtgtcttgtt aacaggggga tttaccatgc ttattggcta tgtacgcgta
     1561 tcaacaaatg accagaacac cgatctacga cgtaatgcgt tgaactgtgc aggatatgag
     1621 ctgattgttg agcgaatggg agcttgattg gaagttgtta gggtatggtg tttacggtcg
     1681 ttgatatggc gaacaaacgc ggggagcgtc acgctcccta aatggtcgcg aaaatatctg
     1741 tggcattgtc aaatttgtga cggtgactaa tattttaatg atatgccatt cgaaatggtg
     1801 tgctaacgta ttgatttaat tgtgacgcga tgttgtattt tatcgcgttt tgttgtctgt
     1861 ttttcattcg cttgatgttg ctatttacat gaaaaataaa gaatttattg tttttgaggt
     1921 gtgtttatga agcaaacagt ttatatcgcc agccctgaga gccagcaaat tcacgtctgg
     1981 aacctgaatc atgaaggcgc actgacgctg acacaggttg tcgatgtgcc ggggcaggtg
     2041 cagccgatgg tggtcagccc ggacaaacgt tatctctatg ttggtgttcg ccctgagttt
     2101 cgcgtcctgg cgtatcgtat tgccccggac gatggcgcac tgacctttgc cgcagagtct
     2161 gcgctgccgg gtagtccgac gcatatttcc accgatcacc aggggcagtt tgtctttgta
     2221 ggttcttaca atgcgggtaa cgtgagcgta acgcgtctgg aagatggcct gccagtgggc
     2281 gtcgtcgatg tggtcgaggg gctggacggt tgccattccg ccaatatctc accggacaac
     2341 cgtacgctgt gggttccggc attaaagcag gatcgcattt gcctgtttac ggtcagcgat
     2401 gatggtcatc tggtggcgca ggaccctgcg gaagtgacta ccattgaagg ggccggcccg
     2461 cgtcatatgg tattccatcc aaacgaacaa tatgcgtatt gcgtcaatga gttaaacagc
     2521 tcagtggatg tctgggaact gaaagatccg cacggtaata tcgaatgtgt ccagacgctg
     2581 gatatgatgc cggaaaactt ctccgacacc cgttgggcgg ctgatattca tatcaccccg
     2641 gatggtcgcc atttatacgc ctgcgaccgt accgccagcc tgattaccgt tttcagcgtt
     2701 tcggaagatg gcagtgtgtt gagtaaagaa ggcttccagc caacggaaac ccagccgcgc
     2761 ggcttcaatg ttgatcacag cggcaagtat ctgattgccg ccgggcaaaa atctcacctc
     2821 atctcggtat acgaaattgt tggcgagcag ggactactgc atgaaaaagg ccgttatgcg
     2881 gtcgggcagg gaccaatgtg ggtggtggtt aacgcacact aaccgctgat ttaaccggcg
     2941 cagtctctcc tgcgccggtg tattaaccta tctcctgtaa cgcatgtctc tggcgttcga
     3001 cgatattggt ccacaaattg tctttatcgt cagtccacaa attaatcagc aaggcaaaaa
     3061 agcgttcagc tgccggagaa agcacggcat ctttgcggcg aataatcccc aatgtccgac
     3121 gtataacggg ttccaccagt gggataccaa taatcgaaga atagggcgca tggggcattg
     3181 ccagaccagg aagcgccgaa atccccagtc ctgcctccac tagtcctaat gacgtcgaaa
     3241 gatgacgcac ttcgtaaaac cagtccagct tccagggctt gtcggccagc tgttgttcta
     3301 tcaacagtcg gttgccgctg gaggagcgta cgccaatcat tttgtaaccc actaactcct
     3361 gccattctac aagctgcttt ttggccaatg gatggtcacg ccgacaggca gcacgaacgg
     3421 ctcgttgacc agtggggtaa aatcaatgga tgaatttgtg acgttgttca tgtttatgcc
     3481 aaagtctgat tcgttacaca gcaccgattc catgcaatta ttcgtgcctt gttccagaat
     3541 ccgcacttta atattgggat acagctcatt aaatttaccg attgccagcg gtaaaaaata
     3601 aaatactgcg gtcggaatac acgctaacgt caccatacca cgatgataag cattcatatc
     3661 acgaatatta aaaagcgttt catcgaattt ctttattaat tcccgcgcct ccgggagcaa
     3721 cctttttcct gcttttgtta acgtaacctt gcgagttgta cgctcaaata gttgaatatg
     3781 taaatcttcc tccatctttt ttattcttcg cgttaatgca ggttgcgtaa tattgagtaa
     3841 tttagcggca ttgttaaacg aactggactc tgccagtatg acaaatgcct tcatacttga
     3901 taattcatgc ttcattatta ctccggaaaa tggaagcgac gattttgggt ggctggccgt
     3961 taaaaatttt aactgcattt agccaactta aattaatgaa aaaatgttat taatcgttga
     4021 gctaaagtca ttagagatgc tttgccctta atgtaaccat atcgcaataa
//
LOCUS       DADMJE010000235         3911 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.238, whole genome shotgun sequence.
ACCESSION   DADMJE010000235 DADMJE010000000
VERSION     DADMJE010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3911)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3911)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3911
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.238"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(313..732)
                     /locus_tag="JN001_003942"
     CDS             complement(313..732)
                     /locus_tag="JN001_003942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309968.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9054989.1"
                     /translation="MVHEDKARKEFASRLALACENAGYEQHGRQAEIARRMKLTPKAV
                     SKWFNGETIPRREKLRELATLIGTTPTYLLGEDTEESGQVRFYQELNPRQKIIIDLLD
                     ELPDSETDELLKTLEEKKQKYNAIYEELARKKKQKAS"
     gene            812..1066
                     /locus_tag="JN001_003943"
     CDS             812..1066
                     /locus_tag="JN001_003943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9054990.1"
                     /translation="MNQKTLEDVIKTVRVAVVADVCGVSQRAIYKWMDNGKLPRTEYT
                     GETNYAEKIALASNGLFSADAILTIGRNKTTTKKLMGVDS"
     gene            1063..1488
                     /locus_tag="JN001_003944"
     CDS             1063..1488
                     /locus_tag="JN001_003944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rha family transcriptional regulator"
                     /protein_id="HAY9054991.1"
                     /translation="MKIKHEHIRMAMNAWAHPDGEKVPAAKITKAYFELGMTFPELYD
                     DSHPEALARNTQKIFRWVEKDTPDALKKIQALLPAIEKAMPPLLVARMRSHSSAYFRE
                     LVETRERLVRDADDFVAVAIAGFNQMNRGGPAGNIVAVH"
     gene            1560..2630
                     /locus_tag="JN001_003945"
     CDS             1560..2630
                     /locus_tag="JN001_003945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001736248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage replisome organizer"
                     /protein_id="HAY9054992.1"
                     /translation="MANAWLRLWHDMPNDPKWRTIARVSGQPIATVMAVYIHLLVSAS
                     RNVTRGHIDVTTEDLASALDVTEEVIDSILQTMQGRVLDGDLITGWEKRQVLKEDNGN
                     ISQTAKSPAERKRAQRERERKREQNGDCHGASRYVTHMSRRVTTDKDTDKDTDQEDQN
                     TMVHGVKNATNQAGDVQTVNPGQPAGTTPEADSAYALKADSGAVQQAMTASPEQSHQL
                     QQPEADSAIQREADRVVPENTGQSVGRVDYPDVFEQVWREYPLRAGANPKKSAFSAWK
                     ARLREGVPPEAMLDGVRRYARYLAATGKTGTEFVQRATTFFGPDRNFENPWLLPVSGT
                     NNQRCVNHISEPDNEIPPGFRG"
     gene            2671..3093
                     /locus_tag="JN001_003946"
     CDS             2671..3093
                     /locus_tag="JN001_003946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001151247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF977 family protein"
                     /protein_id="HAY9054993.1"
                     /translation="MAKVFTQEEREKIKGQVLELVRQSGRETLRQLEAKTGATRYLMS
                     VLARELVASGDVYNSGYGLFPSEQARKDWQNARKKLSRAKLKKPSAVDPDLIWSLPDG
                     EIRRYDSRLNIICRECRKSEVMQRILSFYQGNFQEVMA"
     gene            3090..3395
                     /locus_tag="JN001_003947"
     CDS             3090..3395
                     /locus_tag="JN001_003947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001266129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4406 domain-containing protein"
                     /protein_id="HAY9054994.1"
                     /translation="MRVRVYIAGPMTGYKNFNREAFHNAEEELKREGHTVLNPAVLPD
                     GLTQPQYMDICMAMIRCVDAIYMLKGWQRSAGAKAELALAEKLGHAVIFQETASVQD"
     gene            3382..3837
                     /locus_tag="JN001_003948"
     CDS             3382..3837
                     /locus_tag="JN001_003948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000335116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ead/Ea22-like family protein"
                     /protein_id="HAY9054995.1"
                     /translation="MCKTNYQALRERYSPIQVPECPVCGDEMSIQRIFSRTHIVYACT
                     GEGDDGYFKTGRTFADEHYLKSRVTVVDVSAPDVLALLKELEVKDKRIAELTDALTQM
                     INAHKTTIRFGHERITECGGDCDSPEKMISENPDIRMAEAVLRAGIKTE"
BASE COUNT         1071 a          842 c         1049 g          949 t
ORIGIN      
        1 atcgatagta tccatgctga cctcatttcc ccttaacgcc ggggtagcgg aacaaaaacc
       61 tgctgcatag ttattaaagt tgaaccctgc cgtcatgttc ttacgcctcg ggctggctac
      121 ttaacccctg accactgcct ggtaactcga agtattgccc tgcattctgt ggggcggggt
      181 gggtggcagg tatataatgt actttgcgtt cattgttgta aagtgcttat ggtacatttt
      241 gtgtgtaaaa aaatgagatg ggataaagtg aagcacaaac ccggaggaag gcgctaccgg
      301 atttatgctg gtttaagagg ctttttgttt tttctttcgt gctaactctt cgtaaattgc
      361 attgtacttc tgttttttct cttcaagagt ttttaaaagt tcatctgtct cactgtcagg
      421 gagctcgtcc agaaggtcaa tgatgatttt ttgtcttgga tttaactcct gatagaaacg
      481 tacctgtcca ctttcttctg tatcctctcc caaaagatag gttggtgttg ttcctattag
      541 tgttgctaat tcccttaatt tctcccggcg aggaattgtt tcgccattaa accatttgct
      601 aaccgctttt ggtgttaatt tcattcgacg ggcaatttct gcctgccttc catgttgttc
      661 ataaccagcg ttttcacagg ctagcgcaag cctactggcg aactctttac gcgctttatc
      721 ttcatgaacc ataagttcaa tgatattcgc tcttgaatgt actgtcagtt ctgttatagc
      781 atgtactcaa agttcacatt gtgagggtga tatgaaccag aaaacacttg aagatgtaat
      841 caaaactgtt cgcgttgctg ttgtggccga cgtttgtggt gtcagccaaa gagcaatcta
      901 taaatggatg gataacggaa aattgcctcg cacagaatat accggcgaaa caaattacgc
      961 tgaaaaaatc gctcttgcat caaacggatt attttctgcc gatgcaattt taactattgg
     1021 caggaataaa actactacga aaaagctgat gggagttgat tcatgaaaat caagcatgaa
     1081 cacatccgca tggcgatgaa tgcctgggcg catccggacg gcgaaaaagt accggctgcg
     1141 aaaattacca aagcgtattt cgagctggga atgacgttcc cggaactgta tgacgacagc
     1201 catccggaag ccctggctcg caatactcag aaaattttcc gctgggtgga gaaagacacc
     1261 cctgatgcgc ttaaaaaaat tcaggcgttg ttaccagcta tcgaaaaagc aatgccacct
     1321 ctgctggtgg cccgaatgcg cagccatagc tcagcctatt ttcgggaact agtggagacg
     1381 cgggaacgac tggtgagaga cgctgatgat tttgtcgcag tggcgatcgc tggtttcaac
     1441 cagatgaatc gtggtggccc tgcaggaaat attgtggctg tgcattgact cgcaatattc
     1501 ataccggatc acttccggca atttgtgagt aaaaagattc ggtatcaaaa gaggtgagta
     1561 tggctaacgc ctggctcaga ttatggcatg acatgccaaa tgaccctaag tggcgaacaa
     1621 ttgccagggt gtcagggcag ccaattgcaa cagtgatggc agtgtatatc cacctcctgg
     1681 tgagcgcgtc acgaaatgtc acgcgaggtc acattgatgt cacgacagaa gatttggcaa
     1741 gtgcgctcga cgtgacagaa gaggtaattg attcaatttt gcagacgatg caggggcggg
     1801 tacttgatgg tgatttaatc actggatggg aaaaacgcca ggtgctgaaa gaggacaacg
     1861 gcaatatttc gcaaaccgca aaatctcctg cagagcgcaa gagggcgcag cgagagaggg
     1921 aaagaaagcg ggaacaaaat ggcgattgtc acggcgcgtc acgatatgtc acgcacatgt
     1981 cacgacgagt cacgacagat aaagatacag ataaagatac agatcaagaa gatcaaaaca
     2041 ctatggtcca tggcgtaaaa aacgccacga accaggcagg ggatgttcag accgtcaatc
     2101 ctggtcagcc agcaggcacg acaccggaag ccgattcagc gtatgcgctg aaagccgatt
     2161 cgggcgctgt gcagcaggcg atgaccgcaa gtccggagca atcacaccaa ctgcagcagc
     2221 ctgaagccga ttccgccatt cagcgggaag ccgatcgggt agtcccggaa aacaccgggc
     2281 agtctgtggg acgagtggat tatccggatg tgttcgaaca ggtctggcgg gagtacccgt
     2341 tgcgtgccgg ggcaaacccg aagaaatccg ctttcagtgc ctggaaggcc agattacgcg
     2401 agggggtgcc accagaggcc atgctggatg gcgtgaggcg ttacgcaaga tacctggcgg
     2461 ctaccgggaa aacgggaacg gaatttgttc agcgagcgac gacgtttttt ggaccggacc
     2521 ggaattttga gaacccctgg ttgctcccgg taagcggcac gaacaaccag cgttgtgtga
     2581 atcatatttc tgaaccggat aacgaaattc cgccgggctt cagggggtaa gtgttaattt
     2641 ctggtcatga ggtaattttc aggagggctt gtggcaaaag tttttacaca agaagagcgg
     2701 gaaaaaatta aagggcaggt tcttgaactc gtacgccaga gtgggcgcga gacgttacga
     2761 caactggaag ctaaaactgg ggcaacaaga tatctgatga gcgttctggc cagagagctg
     2821 gttgccagtg gcgatgtata caactctggt tacgggttat tcccgtctga acaggcgcgt
     2881 aaggactggc aaaatgcccg taaaaagctc tcaagggcaa agctgaagaa accatctgcg
     2941 gttgatccgg accttatctg gtcattacct gacggagaaa tacgtcgcta cgacagtcgc
     3001 ctaaacataa tctgtcgcga gtgccggaag agcgaagtta tgcagcgcat attgtcgttt
     3061 tatcagggta attttcagga ggtgatggcg tgagggtgag agtctatatc gccggtccaa
     3121 tgaccgggta taaaaatttc aaccgtgagg cgtttcacaa tgcggaagag gaactgaaac
     3181 gggaagggca taccgtctta aacccggcag tacttccgga cgggctgaca cagccgcagt
     3241 acatggatat ctgcatggcg atgattcgtt gtgtggatgc gatttacatg ctgaaaggct
     3301 ggcagcggtc agcaggcgct aaggcagaac tggcgctggc ggagaaactg gggcatgcgg
     3361 tgatttttca ggagacagcc agtgtgcaag actaattacc aggcattacg tgaacgttat
     3421 tcaccaattc aggtgccgga atgtcctgtt tgtggcgatg aaatgtcgat acagcgcata
     3481 ttttccagaa cgcatattgt gtatgcctgc acaggtgagg gggatgatgg atattttaaa
     3541 actggtcgaa cttttgcgga tgagcattac ctgaaatcgc gcgtaaccgt cgttgatgtt
     3601 agcgctcctg acgtactggc tttactgaaa gagctggaag ttaaagacaa acgcattgca
     3661 gaattgacag atgcgcttac acaaatgatt aatgcgcaca aaaccacaat tcgttttggt
     3721 catgaacgca taactgaatg tggtggtgat tgcgactcgc cggaaaagat gatttcagaa
     3781 aatccggata tcagaatggc agaggctgtt ttgagagcag gaataaaaac tgaataatta
     3841 aatttagcac agcaaataaa atttaatcct taaccggagg gatttctgca ccctcagaac
     3901 atcaggaggc c
//
LOCUS       DADMJE010000236         3852 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.239, whole genome shotgun sequence.
ACCESSION   DADMJE010000236 DADMJE010000000
VERSION     DADMJE010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3852)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3852)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3852
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.239"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..410
                     /locus_tag="JN001_003949"
     CDS             <1..410
                     /locus_tag="JN001_003949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY9054996.1"
                     /translation="FTTIMKENGLKANSLCVEITETVIERINEHFYLNIEQLRKQGVR
                     ISIDDFGTGLSNLKRFYEINPDSIKVDSQFTGDIFGTAGKIVRIIFDLARYNRIPVIA
                     EGVESEDVARELIKLGCVQAQGYLYQKPMPFSA"
     gene            448..1776
                     /locus_tag="JN001_003950"
     CDS             448..1776
                     /locus_tag="JN001_003950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HAY9054997.1"
                     /translation="MSRINKFVLTVSLLIFIMISAVACGIYTQMVKERVYSLKQSVID
                     TAFAVANIAEYRRSVAIDLINTLNPTEEQLLVGLRTAYADSVSPSYLYDVGPYLISSD
                     ECIQVKEFEKNYCADIMQVVKYRHVKNTGFISFDGKTFVYYLYPVTHNRSLIFLLGLE
                     RFSLLSKSLAMDSENLMFSLFKNGKPVTGDEYNAKNAIFTVSEAMEHFAYLPTGLYVF
                     AYKKDVYLRVCTLIIFFAALVAVISGASCLYLVRRVINRGIVEKEAIINNHFERVLDG
                     GLFFSAADVKKLYSMYNSAFLDDLTKAMGRKSFDEDLKALPEKGSYLCLFDVDKFKNI
                     NDTFGHLLGDEVLMKVVKILKSQIPVDKGKIYRFGGDEFAVIYTGGTLEELLSILKEI
                     VHFQVGSINLSTSIGVAHSNECTTVERLKMLADERLYKSKKNGRAQISWQ"
     gene            complement(1823..3148)
                     /gene="rimO"
                     /locus_tag="JN001_003951"
     CDS             complement(1823..3148)
                     /gene="rimO"
                     /locus_tag="JN001_003951"
                     /EC_number="2.8.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12 methylthiotransferase
                     RimO"
                     /protein_id="HAY9054998.1"
                     /translation="MSKVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDD
                     ADMVIVNTCGFIDSAVQESLEAIGEALNENGKVIVTGCLGAKEDQIREVHPKVLEITG
                     PHSYEQVLEHVHHYVPKPKHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIP
                     SMRGDLVSRPIGEVLSEAKRLVDAGVKEILVISQDTSAYGVDVKHRTGFHNGEPVKTS
                     MVSLCEQLSKLGIWTRLHYVYPYPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMK
                     RPGSVDRQLARIKQWREICPELTLRSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCF
                     KYSPVEGADANALPDQVPEEVKEERWNRFMQLQQQISAERLQEKVGREILVIIDEVDE
                     EGAIGRSMADAPEIDGAVYLNGETNVKPGDILRVKVEHADEYDLWGSRV"
     gene            3361..3744
                     /gene="bssR"
                     /locus_tag="JN001_003952"
     CDS             3361..3744
                     /gene="bssR"
                     /locus_tag="JN001_003952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biofilm formation regulator BssR"
                     /protein_id="HAY9054999.1"
                     /translation="MFVDRQRIDLLNRLIDARVDLAAYVQLRKAKGYMSVSESNHLRD
                     NFFKLNRELHDKSLRLNLHLDQEEWSALHHAEEALATAAVCLMSGHHDCPTVITVNAD
                     KLENCLMSLTLSIQSLQKHAMLEKA"
BASE COUNT         1007 a          857 c          950 g         1038 t
ORIGIN      
        1 gttttaccac catcatgaaa gaaaatggcc tgaaggcgaa cagcctctgt gttgagatca
       61 ctgaaaccgt gatcgagcga attaatgaac atttttatct caatattgaa caactgcgta
      121 aacaaggggt acggatatcg attgatgact ttggcaccgg tttgtcaaac ctgaaacgtt
      181 tttatgaaat taatccagac agcataaagg tggactcgca atttaccggc gatattttcg
      241 gtactgcggg aaaaattgtg cgcattattt tcgatctggc acgctataac cggatcccgg
      301 tgattgcgga aggcgtagag agcgaagacg ttgcacgcga attaattaaa ttaggatgtg
      361 ttcaggctca ggggtatctg taccagaaac ctatgccatt ctccgcctag gataaaagtg
      421 gaaaattagt aaaagagtag tttacgtatg tccagaatca ataagttcgt acttacagtc
      481 agtctgctga tttttatcat gatttcagca gttgcctgcg ggatctacac tcaaatggta
      541 aaggaacggg tgtatagcct gaaacagtcc gttattgata ctgcttttgc ggtggcaaat
      601 attgctgaat atcggcgtag cgtggcaatt gatcttatca acacgctaaa tcccactgag
      661 gaacagctgt tggttggttt gcgcacagct tacgccgact cggtttcccc ctcttatttg
      721 tacgatgtcg gtccttatct gatttccagt gacgaatgta ttcaggtaaa ggagttcgag
      781 aaaaattatt gtgcagatat tatgcaggtt gtgaagtatc gacatgtcaa aaatacaggg
      841 tttatctctt ttgacggtaa aaccttcgtc tattacctct atccggtaac tcacaatcgt
      901 agtctgatat ttttgcttgg tctggagcgt ttttctttac tgtcaaaatc gctggcgatg
      961 gacagcgaga acctgatgtt ctctctattt aagaacggta aaccggtgac cggtgatgaa
     1021 tataatgcta aaaacgccat cttcaccgtt tcggaagcga tggagcactt cgcctatttg
     1081 ccgaccggat tgtacgtatt tgcgtataaa aaagatgttt atttgcgggt ctgtacattg
     1141 attattttct ttgccgcatt ggtggctgtg atatcgggtg ccagttgcct ctatctggta
     1201 cgcagagtga ttaatcgtgg tattgtggag aaagaagcca tcattaataa ccattttgaa
     1261 cgcgtactgg atggcgggct tttcttttcg gctgccgatg tcaaaaaact ctacagtatg
     1321 tataactcgg cgttcctgga cgacctgacc aaagcaatgg gcagaaaatc ctttgacgaa
     1381 gatttaaaag cgctgccgga aaaaggcagt tatttgtgcc tgtttgacgt cgataaattc
     1441 aaaaacatta acgacacctt cggtcatttg ctgggcgatg aagtgttgat gaaagtggtg
     1501 aaaatcctta aatcacagat cccggtagat aaaggtaaaa tctaccgctt cggcggtgac
     1561 gaatttgcgg tgatttatac gggtggaacg ctggaagagt tgctatcgat tctaaaagaa
     1621 atcgttcatt tccaggtggg aagcattaat ttaagtacca gtatcggtgt agcgcattca
     1681 aatgaatgta ccaccgtcga acgcttgaaa atgctggcgg atgagcggct gtataagagt
     1741 aagaaaaacg gcagggctca gattagctgg cagtaatcat tattcgcagg ccggacaaat
     1801 gattttgccc ggcctgaatt aattaaaccc ggctacccca caaatcgtac tcatcggcgt
     1861 gctcgacttt cacacgcagg atatcacccg gcttaacgtt ggtttcacca ttgagataaa
     1921 ccgcgccgtc gatttccggt gcatctgcca tgctgcgacc aatcgcgcct tcttcgtcca
     1981 cttcgtcgat aatcaccaga atttcacggc ccactttctc ttgcaggcgc tcggcggaaa
     2041 tctgctgctg cagctgcatg aaacggttcc agcgttcttc tttaacttct tccggaacct
     2101 ggtcaggcag ggcattggcg tctgcacctt caaccgggct gtatttaaag cagccaacgc
     2161 gatccagacg cgcttctttc aggaagtcga gtagcatctg gaaatcttct tctgtctcgc
     2221 cagggaagcc gacaataaag gttgagcgta gggtcagttc cgggcagatt tcgcgccact
     2281 gtttgatgcg cgccagttgg cgatctacag aacccggacg cttcatcagt ttgagaatgc
     2341 gcgggctggc gtgctgcaac ggaatgtcca gatacggcag gattttgcct tctgccatca
     2401 gtgggatgac gtcgtccaca tgcggataag ggtaaacgta gtgcagacgt gtccagatcc
     2461 ccagtttcga taactgttcg cacaggctga ccatgctggt ttttaccggc tcgccgttgt
     2521 ggaagccagt acgatgttta acatcaacgc cataggcgga agtatcctgc gagatcacca
     2581 gaatctcttt aacgcccgca tctaccagac gtttcgcttc acttaacact tcgccaatcg
     2641 gacggctcac caggtcgccg cgcatagacg gaataatgca gaaggtgcag cggtgattac
     2701 agccttccga aattttcaga taggcataat gacgcggcgt cagtttcaca ccttgttctg
     2761 gcaccaggct caggaatggg ttgtgtttcg gttttggcac gtagtgatga acgtgctcca
     2821 gaacctgctc atagctatga ggcccggtga tttccagcac tttcgggtgg acttcgcgga
     2881 tctgatcttc ttttgccccc agacaaccgg tcacaattac cttgccgttt tcattcaacg
     2941 cttcaccaat ggcttccagt gattcttgta ccgcgctgtc aataaagccg caggtgttga
     3001 cgatcaccat gtccgcatcg tcatagctcg gtaccacgtc ataaccttca gtgcggagtt
     3061 cggtgagaat acgctctgaa tcgacaaggt ttttcggaca gccaagggaa acaaagccga
     3121 ttttcggctg gggagttact ttgctcatag cttaaaaaat attcagttac aggaaaggtc
     3181 agggcaggga ttctacagag ttctggataa aatttgtatc gcaatctcat tcgctggcgg
     3241 aggcgaagga aatgtaaatt ttgttaattc ggcgtgaaga attgatcctg gacagcattt
     3301 tgctcaaaaa atagccatac tatttaattg caacaaggct ggaaagagga ggatcgaagt
     3361 atgttcgttg acagacagcg aatcgatctg ctgaaccggt tgatcgacgc acgcgttgac
     3421 ctcgctgcat acgtgcaact gaggaaggca aaaggataca tgtccgtcag cgaaagcaat
     3481 catctacgag ataacttttt taaactgaat cgcgaactgc acgataaatc gctgcggttg
     3541 aatcttcatc tggatcagga agagtggagt gctcttcatc atgctgaaga agcattagcg
     3601 acagccgcag tatgtttgat gagtgggcac catgattgcc cgactgttat taccgtcaac
     3661 gccgataagc ttgaaaattg tctgatgagc ttaacgctga gtatccagag cctgcagaag
     3721 cacgccatgc ttgagaaggc ctgaaaacta agggggagaa agcgtctccc ccttcatgtt
     3781 taagtttttg taaaaatgaa tttgttatct cctccactga ctacgcttta agccagagtc
     3841 aatccggagg cg
//
LOCUS       DADMJE010000237         3818 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.240, whole genome shotgun sequence.
ACCESSION   DADMJE010000237 DADMJE010000000
VERSION     DADMJE010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3818)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3818)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3818
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.240"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            17..253
                     /locus_tag="JN001_003953"
     CDS             17..253
                     /locus_tag="JN001_003953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004982904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome C TorY domain protein"
                     /protein_id="HAY9055000.1"
                     /translation="MNPGTDLTVVDASGKQPIVLLQGYQMQGSENTLYLAAGQRLALA
                     TLSEEGIKALTLNGEWQAGEFSASNMVNRNTGCW"
     gene            193..1575
                     /locus_tag="JN001_003954"
                     /pseudo
     CDS             193..1575
                     /locus_tag="JN001_003954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707760.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
     gene            complement(1740..2711)
                     /gene="cmoB"
                     /locus_tag="JN001_003955"
     CDS             complement(1740..2711)
                     /gene="cmoB"
                     /locus_tag="JN001_003955"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic
                     acid(34) synthase CmoB"
                     /protein_id="HAY9055001.1"
                     /translation="MIDFGNFYSLIAKNHLSHWLETLPAQIANWQREQQHGLFKQWSN
                     AVEFLPEIKPYRLDLLHSVTAESEEPLSTGQIKRIETLMRNLMPWRKGPFSLYGVNID
                     TEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFLCQ
                     FEAVRKLLGNDQRAHLLPLGIEQLPALKAFDTVFSMGVLYHRRSPLEHLWQLKDQLVN
                     EGELVLETLVIDGDENTVLVPGDRYAQMRNVYFIPSALALKNWLKKCGFVDIRVVDVC
                     VTTTEEQRRTEWMVTESLSDFLDPHDPSKTVEGYPAPKRAVLIARKP"
     gene            complement(2708..3451)
                     /gene="cmoA"
                     /locus_tag="JN001_003956"
     CDS             complement(2708..3451)
                     /gene="cmoA"
                     /locus_tag="JN001_003956"
                     /EC_number="2.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxy-S-adenosyl-L-methionine synthase CmoA"
                     /protein_id="HAY9055002.1"
                     /translation="MSHRDTLFSAPIARLGDWTFDERVAEVFPDMIQRSVPGYSNIIS
                     MISMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHI
                     DAYKAPTPVDVIEGDIRDIAIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGAL
                     VLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARL
                     HKAGFEHSELWFQCFNFGSLVALKAEDAA"
     gene            complement(3492..>3818)
                     /locus_tag="JN001_003957"
     CDS             complement(3492..>3818)
                     /locus_tag="JN001_003957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310606.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055003.1"
                     /translation="LRLQYRVAYGDGGFSELQSAIRIHGNAVEYIPIAIVLMLFMEMN
                     GAETWMVHICGIVLLAGRLMHYYGFHHRLFRWRRSGMSATWCALLLMVLANLWYMPWE
                     LVFSLR"
BASE COUNT         1010 a          950 c         1009 g          849 t
ORIGIN      
        1 aggcgagctg gctaccgtga atcctggtac cgatctcacc gtcgttgatg ccagtggcaa
       61 acagccgatc gttctgttgc agggttatca aatgcagggc agtgaaaaca cgctctacct
      121 ggcggcaggt caacggctgg cgctagccac attaagtgaa gaaggtatca aggcgctcac
      181 gctaaacggg gaatggcagg ctggggaatt cagcgccagc aatatggtga acagaaacac
      241 tggatgctgg tgacgctggc ggcggtgtta gggcagattg gtacaccggg cggcggtttt
      301 ggtttctctt atcattactc caatggtggc aacccgacac gtgttggcgg cgtgctgccg
      361 gaaatgtctg cggcgattgc cggacaggcc agcgaggccg ctgatgatgg cggaatgagg
      421 gcgattcctg ttgcccgtat cgtcgatgcg ctggaaaatc ctggcggcaa atatcagcat
      481 aacggtaaag agcaaacgta tccgaatatc aaaatgatct ggtgggcggg tggcggtaac
      541 tttacccatc accaggatac taatcgtctg attaaagtat ggcagaaacc ggagatgatc
      601 gtcgtttctg aatgctactg gaccgcagct gctaaacatg cagatatcgt attaccgatc
      661 accacatcgt ttgagcgcaa tgacttgacg atgaccggtg attacagcaa ccagcatatt
      721 gtgccgatga agcaggctgt cgctccgcaa tttgaagcgc gaaacgattt tgatgtgttt
      781 gccgatcttg cggaattact gaaacctggc ggaaaagaga tctataccga aggtaaagat
      841 gaaatggcgt ggctgaaatt tttctatgat gccgctcaga aaggtgcccg tgcgcaacgc
      901 gtgactatgc cgatgtttaa tgccttctgg cagcaaaata aactgatcga aatgcgccgc
      961 agcgagaaga acgaacagta cgttcgttat gctgatttcc gcgccgatcc ggtgaaaaat
     1021 gcgctgggta cgccaagcgg caaaattgag atttactcca aaacgctgga aaaatttggc
     1081 tataaggatt gcccggcaca tccaacctgg cttgcgcctg atgagtggaa gggtaccgcc
     1141 gacgagaagc agttgcagct tctgaccgca catccggcac accgtttaca tagtcagctt
     1201 aactatgcgg aactgcgtaa aaaatatgcg gttgcagatc gtgaaccaat cactattcat
     1261 accgaagatg ctgctcgctt tggtattgcg aatggtgatc tggtgcgtgt gtggaacaaa
     1321 cgtggtcaga ttctgacagg cgcggtggtg actgacggga tcaaaaaagg cgtggtatgc
     1381 gtgcatgaag gtgcatggcc agatctggaa aatggcttgt gtaaaaacgg cagtgcgaac
     1441 gtgttaacgg cggatatccc cagctcgcag ctggcaaatg cctgtgccgg taactctgcg
     1501 ctggtgtata tcgaaaaata tacgggtaac gcaccgaagt taacggcatt tgataagcct
     1561 gctgttcagg cgtaagaagt gaatagcgcc cggaaacggg cgctgaggtt atgcaaacgt
     1621 aaaactgcct gatgcgctat gcttatcagg tctacatagt ccctgcaata gattgaatta
     1681 gcaagggttt gtaggccgga taaggcattc acgctgcatc cggcagtaat accagacctt
     1741 tacggcttgc gcgcaatcag caccgcgcgt ttaggcgcag gataaccttc aactgtctta
     1801 ctcggatcat gtgggtcgag gaaatcggac agagattcgg taaccatcca ttcagtgcgt
     1861 cgctgctctt cagtagtggt aacgcacaca tccacaacgc ggatatctac aaaaccacac
     1921 ttcttcagcc agtttttcag cgccagcgcg gaagggatga aatagacatt acgcatttgc
     1981 gcgtaacgat cgcctggtac cagcaccgtg ttctcatcgc catcaataac cagcgtttcc
     2041 agcaccagtt caccctcatt caccagttga tctttcaact gccagagatg ctccagcggc
     2101 gaacggcgat ggtaaagcac gcccatcgaa aagacggtat caaaggcttt cagtgccgga
     2161 agctgttcaa tacctaacgg taacaaatgt gcgcgctgat cgttacccag tagtttacgc
     2221 accgcttcaa actggcacag aaacagttgc gtagggtcga tccccaccgc gaggtgcgcg
     2281 cctgcgccaa tcatgcgcca catgtgataa ccgctgccgc agccgacatc cagaatggtg
     2341 cgtccggtta aatcagaaag atggggcaga acacgatccc atttccagtc ggaacgccat
     2401 tcggtatcga tgttgacgcc atacagtgag aacggccctt tgcgccatgg catcaggttc
     2461 cgcataagcg tttcaatgcg tttaatttgc ccggtgctca gtggctcttc gctttcggcg
     2521 gttacgctat gcaataaatc cagacgatac ggtttaattt caggcagaaa ttccaccgcg
     2581 ttggaccact gcttaaacag cccgtgctgc tgctcgcgct gccagttagc aatctgcgcg
     2641 ggcagcgttt cgagccagtg tgaaagatga tttttggcaa tcagagaata aaagttacca
     2701 aagtcgatca tgcagcgtcc tctgctttta atgccaccag tgaaccaaag ttaaagcact
     2761 ggaaccacag ctcgctatgc tcaaaaccgg ctttatgcag gcgtgcttta tgggtttcca
     2821 cggaatcggt cagcatcacg ttttccagca tgctgcgctt ctggctgatc tccagttcgc
     2881 tgtaaccgtt ggcacgttta aagtcgtggt gcatgttgaa caacagttca ccaactttgg
     2941 catcttcgaa actgaatttt tccgaaagca ccagcgcgcc gcccgggttc agtccttgat
     3001 aaattttatc cagtaatgcc tggcgctcgg aaggttccag gaattgcagg gtaaaattca
     3061 gcaccaccat cgatgcgttt tcaatggcga tatcgcgaat atcaccttca atgacgtcta
     3121 ctggcgtagg ggctttatag gcgtcaatat gacgacggca gcgttcaatc atcgccgggg
     3181 agttgtcgat ggcaataatt ttgcaattat catgatgaat gttgcgacgc accgagagcg
     3241 tcgccgcgcc cagagaacaa cccagatcgt aaacctgcgt accaggttga acgaagcgct
     3301 cggctaacat actaatcatg gaaataatat tggaatagcc gggaacggaa cgctggatca
     3361 tatccgggaa gacttcagct acccgttcat caaaggtcca gtcgcccagt ctggcgatag
     3421 gggcagaaaa tagcgtgtcg cggtgagaca taacgtaaaa atccgggaaa aagaaagtgg
     3481 cgtattgtgc gctaacgcag ggagaaaacc aactcccagg gcatatacca aagattcgcc
     3541 agcaccatca gcaacagcgc acaccaggtg gcgctcatgc cggaacgtcg ccagcgaaac
     3601 agacggtgat gaaaaccgta ataatgcatc agacgaccag caagcaaaac gatgccgcaa
     3661 atatgcacca tccaggtttc tgcgccattc atttccataa acagcatcag cacaatcgcg
     3721 atgggaatat attccaccgc gttaccatga atgcgaatag cgctttgcag ttcgctaaaa
     3781 ccaccgtcac cataggcaac gcggtactgc aaacgcaa
//
LOCUS       DADMJE010000238         3737 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.241, whole genome shotgun sequence.
ACCESSION   DADMJE010000238 DADMJE010000000
VERSION     DADMJE010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3737)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3737)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3737
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.241"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..860)
                     /locus_tag="JN001_003958"
     CDS             complement(<1..860)
                     /locus_tag="JN001_003958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008786992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HAY9055004.1"
                     /translation="MSSHFTPFTLKDISRPGGGFAMLAVDQREAMRLMFAAAGQPKPI
                     ADSVLTDFKVAATRILSPYASAVLADKQFCLEQIVEQGAVANSCGLIVAADLFIPGNG
                     IPVDSVEIDMSVDPHKAREMGAKAMKLLVLWREDEPAEERLAMVDKFVRRCRSAGLVS
                     IIEPVVRPPRRGWDFDRESAIVAAAAELGGTEADLYKAEMPLGGKGDEKTLLAACQQL
                     NDQMKMPWVILSSGVDADIFGRAVSIAMKGGASGFLAGRAVWASVVGAQDPQTMLRDV
                     SVPRLQRLAE"
     gene            complement(885..1763)
                     /gene="yihU"
                     /locus_tag="JN001_003959"
     CDS             complement(885..1763)
                     /gene="yihU"
                     /locus_tag="JN001_003959"
                     /EC_number="1.1.1.373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001318159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfolactaldehyde 3-reductase"
                     /protein_id="HAY9055005.1"
                     /translation="MATIAFLGLGQMGSPMANNLLQKGHSLQVFDVNAQAVDALVTQG
                     ATAAQTQAEAAAGAEFIITMLPNGDIVRQVLLGEKGVCEAVSSDALLIDMSTIHPLQT
                     DALIRELQEKGISMMDAPVGRTSVNAIDGTLLILAGGTDEQIARARPILMCMGNELVE
                     AGGPGMGIRVKLINNYMSIALNALSSEAAVLCESLGLNLDVAIKVMSGTAAGKGHFTT
                     TWPGKVLKGDLSPAFMVDLALKDLRIAVDVARETGTPLNMGIAAESYYAAASQDGKGR
                     QDWSALLNQVRQQAGL"
     gene            1936..2832
                     /locus_tag="JN001_003960"
     CDS             1936..2832
                     /locus_tag="JN001_003960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000196715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HAY9055006.1"
                     /translation="MTRIACVGITVQDRIYSLPTLPEGGGKYQANHYLEIGGGPAATA
                     AVAIAKLGVEVDFIGRVGDDSCGNTLLAELEGWGVNTAFCRRYPNARSSQSAILVDQH
                     GERIIVNYPSPDLGTDAEWLEAIDFSRYNLILADVRWHSGTEKAFSLARLAGVTTLLD
                     ADMTPQDISPLVALADHAVFSTPGLKRMTGLQSPEEGLFQATTQTAGKVYVTLGSEGS
                     LWIEDGHLCQQEAFSVNVVDTTGAGDVFHGALAVALAEKMPTKEAIRFASAVAAMKCT
                     QPGGRAGIPNREQTESFLSLYA"
     gene            2872..3660
                     /locus_tag="JN001_003961"
     CDS             2872..3660
                     /locus_tag="JN001_003961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000022208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HAY9055007.1"
                     /translation="MSIIEVTGNPRHDQLVHLIAERGYMNIEELAQLLDVSTQTVRRD
                     IRKLSEQGLITRHHGGAGRVSSVMNTAFEQRELSLTAEKRAIAEAVADYLPERCTVFI
                     TIGTTVEAVARALLNRRDLRIITNSLRVAQILYKNQDIEVMVPGGTLRAHNGGIIGPG
                     AVDFIEGFRADYLITSIGAIEHDGTLLEFDLNEALVARTMIKHARNTLLVADHTKFAA
                     SAAVSIGNARNVRAFFTDAPPPNSFCQLLSEENVELVVAEQEVS"
BASE COUNT          962 a          955 c          902 g          918 t
ORIGIN      
        1 atttctgcca accgttgtaa acgaggaaca gagacatcgc gcagcatagt ttgtggatct
       61 tgtgcaccaa caaccgacgc ccaaaccgct cgtccagcca ggaagcccga cgcaccacct
      121 ttcatggcaa tacttactgc acggccaaaa atatcggcat caacgccaga agaaagaatt
      181 acccacggca tcttcatctg atcgttaagt tgctgacagg cggcaagtaa ggttttttca
      241 tcgcctttgc cccctaatgg catctcggct ttgtaaagat cagcctctgt tccaccaagc
      301 tctgcggcgg cggcaacaat ggcgctttca cgatcaaagt cccaaccgcg acgaggtgga
      361 cgcaccacag gttcaataat gctcaccagc ccggcactac ggcagcgacg aacaaattta
      421 tcaaccattg ccagacgttc ctctgcgggt tcatcttcac gccagagtac aagtaatttc
      481 attgccttag cccccatttc acgggcttta tgcgggtcga cggacatatc tatttcaacg
      541 ctatcaaccg ggatgccatt acctgggata aaaagatcgg cagcgacaat caggccgcaa
      601 gaattagcaa cagcgccctg ctcgactatt tgctcaagac aaaattgttt atccgccaga
      661 acggcagaag cataaggaga aaggattcgg gtcgcggcaa ctttaaaatc ggtgagtaca
      721 ctgtcggcga tgggttttgg ctgccctgct gccgcaaaca tcaagcgcat ggcctcacgc
      781 tgatcgacag ctaacatggc aaatccacca cctgggcggg agatatcttt cagcgtaaat
      841 ggggtgaagt gggatgacat agaaactcct gttaatagat aaaattaaag accagcctgc
      901 tggcgaacct gatttagcag ggcactccag tcctgccgcc ctttgccgtc ttgacttgct
      961 gcagcgtaat aactttctgc tgcaatcccc atattgagcg gtgtccccgt ctcccgagcg
     1021 acgtcaactg caatacgcag atctttcaac gccagatcca ccatgaaggc gggtgaaaga
     1081 tcgcctttca gcactttgcc aggccaggtg gtcgtaaaat gtcctttccc tgctgccgta
     1141 ccactcatca ccttaattgc gacatcaaga tttaatccca gtgactcaca taacacagcg
     1201 gcctcggagg acagcgcatt aagcgcaatg ctcatatagt tgttaattag cttcacgcgg
     1261 atccccattc ctgggccgcc agcctcgacc agctcattac ccatgcacat aagaatcggg
     1321 cgtgcacgtg caatctgctc atcagtgcca cccgctaaaa tcagcaatgt gccatcaatc
     1381 gcattcacgg acgttctgcc cacgggagcg tccatcatac tgatgccttt ttcttgtaac
     1441 tcccgtatta atgcatcggt ctgtaaggga tgaatagtcg acatatcaat caataacgcg
     1501 tcagatgaaa cagcctcaca gacgcctttt tcccccaaca gaacctgtcg aacaatgtca
     1561 ccattgggaa gcatagtgat gataaattca gcgcctgctg ctgcttccgc ttgggtttgt
     1621 gccgcagtgg ccccctgcgt aactagcgca tcgacggcct gtgcattgac atcaaatacc
     1681 tgcaatgaat gccctttttg caatagattg ttagccattg ggctacccat ctgccccagc
     1741 ccgagaaatg caatggttgc catgaatact ctcctgtctg acattgacaa aataatgaca
     1801 attgaaaatt cgtttttgtc tgtttttgag catatttgtg atttatgttc aaaaacacga
     1861 cacgcatcac taatttgatc atttgcgtca tttaaattga ccaaagacga caaaattaaa
     1921 caggacaaga caaatatgac cagaattgca tgcgtgggta tcacagttca ggacagaatt
     1981 tattctttgc ccactctgcc ggagggcggc gggaaatatc aggcaaatca ttatcttgag
     2041 attggtggcg gcccggcagc aacagccgct gttgcaatcg caaagcttgg cgtggaggtt
     2101 gatttcatcg gtcgcgtcgg cgatgacagt tgtggaaata ccttacttgc agaacttgag
     2161 ggttggggcg tcaataccgc attttgccgc cgatatccta acgcccgttc gtcgcaatca
     2221 gcgatcctcg ttgatcagca tggcgaacgg attatcgtta attatccaag tcctgatctc
     2281 ggtactgatg ccgaatggtt agaagcgatc gatttctctc gttataatct gattctggcc
     2341 gatgttcgct ggcatagcgg tactgaaaaa gcattctcgc tagcgcgcct tgcgggtgtg
     2401 acaacgcttt tagacgccga tatgacaccg caggatattt ctccacttgt cgcgcttgcc
     2461 gatcacgccg tgttctcaac accagggctg aaacgcatga ctggcctgca gtctcctgaa
     2521 gaaggtttgt tccaggcaac gacacaaaca gcaggtaaag tgtatgttac gctgggttct
     2581 gaaggatcgt tgtggattga agatggtcat ttgtgtcaac aggaggcatt ttctgtcaat
     2641 gtggttgata ccactggagc aggcgatgtt tttcacggcg cactcgcggt agcgttggca
     2701 gaaaaaatgc caacaaaaga ggctattcgt tttgccagtg cggttgccgc gatgaaatgt
     2761 acccagcctg gcggtcgggc cggcattcct aatcgtgagc aaaccgaatc atttttgtca
     2821 ctttatgcgt aaaatggtaa acatctaccg aggaggggca agggagtatt catgagtatc
     2881 atcgaagtga caggtaatcc acgccatgac caactcgttc atctaatcgc agaacgcggt
     2941 tatatgaata ttgaagaact ggcacaactg ctggatgttt caacgcaaac cgtgcgccgg
     3001 gatatccgaa aactcagtga gcagggcttg atcacccgtc atcatggagg ggccgggcgc
     3061 gtctccagcg tcatgaatac cgcttttgag caacgggaac tttcgctcac cgccgagaaa
     3121 cgggcgatcg ctgaggcagt cgccgattac cttcccgaac gctgtaccgt ctttatcacc
     3181 atcggtacaa ccgtagaagc cgttgccagg gcattactca accggcgtga tttacgcatt
     3241 atcactaaca gcctacgtgt ggcacagatt ctttataaga atcaggatat tgaagtgatg
     3301 gtgccgggag gcactttacg cgctcataac ggcgggatta tcggcccagg agccgtggat
     3361 tttattgaag gcttccgcgc agattattta atcaccagta taggtgccat tgaacatgac
     3421 ggcaccctac tggaatttga tctaaatgaa gcgttagtcg cgagaacgat gattaaacat
     3481 gcgcggaata cattgttagt ggccgatcat acgaagtttg ccgcgtctgc tgccgtttca
     3541 attggcaatg cacggaatgt cagggctttt tttactgatg ccccgcctcc caattctttc
     3601 tgccagttgt taagtgaaga gaatgttgaa ctggtggttg ccgagcaaga agtatcctga
     3661 aattgaaatt tcggaaaatc cgctgggaat ttcagcggat tttgttttcc ataagcaaaa
     3721 aaaacctgcc agcgatg
//
LOCUS       DADMJE010000239         3730 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.242, whole genome shotgun sequence.
ACCESSION   DADMJE010000239 DADMJE010000000
VERSION     DADMJE010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3730)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3730)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3730
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.242"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(120..2189)
                     /gene="glyS"
                     /locus_tag="JN001_003962"
     CDS             complement(120..2189)
                     /gene="glyS"
                     /locus_tag="JN001_003962"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001291772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HAY9055008.1"
                     /translation="MSEKTFLVEIGTEELPPKALRSLVESFAANFTVELDNAGLAHGT
                     VQWFAAPRRLALKVANLAEAQPDREIEKRGPAIAQAFDAEGKPSKAAEGWARGCGITV
                     DQAERLTTDKGEWLLYRAHVKGESTEALLPNMVATSLAKLPIPKLMRWGASDVHFVRP
                     VHTVTLLLGDKVIPATILGIQSDRVIRGHRFMGEPEFTIDNADQYPEILRERGKVIAD
                     YEERKAKIKADAEEAARKIGGNADLSESLLEEVASLVEWPVVLTAKFEEKFLAVPAEA
                     LVYTMKGDQKYFPVYANDGKLLPNFIFVANIESKDPQQIISGNEKVVRPRLADAEFFF
                     NTDRKKRLEDNLPRLQTVLFQQQLGTLRDKTDRIQALAGWIAEQIGADVNHATRAGLL
                     SKCDLMTNMVFEFTDTQGVMGMHYACHDGEAEDVAVALNEQYQPRFAGDDLPSNPVAC
                     ALAIADKMDTLAGIFGIGQHPKGDKDPFALRRAALGVLRIIVEKNLNLDLQTLTEEAV
                     RLYGDKLTNANVVDDVIDFMLGRFRAWYQDEGYTVDTIQAVLARRPTRPADFDARMKA
                     VSHFRTLDAAAALAAANKRVSNILAKSDEVLSDRVNASTLKEPEEIKLAMQVVVLRDK
                     LEPYFAEGRYQDALVELAELREPVDAFFDKVMVMVDDKELRLNRLTMLEKLRELFLRV
                     ADISLLQ"
     gene            complement(2199..3110)
                     /gene="glyQ"
                     /locus_tag="JN001_003963"
     CDS             complement(2199..3110)
                     /gene="glyQ"
                     /locus_tag="JN001_003963"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HAY9055009.1"
                     /translation="MQKFDTRTFQGLILTLQDYWARQGCTIVQPLDMEVGAGTSHPMT
                     CLRALGPEPMAAAYVQPSRRPTDGRYGENPNRLQHYYQFQVVIKPSPDNIQELYLGSL
                     KELGMDPTIHDIRFVEDNWENPTLGAWGLGWEVWLNGMEVTQFTYFQQVGGLECKPVT
                     GEITYGLERLAMYIQGVDSVYDLVWSDGPLGKTTYGDVFHQNEVEQSTYNFEYADVDF
                     LFTCFEQYEKEAQQLLALENPLPLPAYERILKAAHSFNLLDARKAISVTERQRYILRI
                     RTLTKAVAEAYYASREALGFPMCNKDK"
     gene            complement(3205..3504)
                     /locus_tag="JN001_003964"
     CDS             complement(3205..3504)
                     /locus_tag="JN001_003964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055010.1"
                     /translation="MMMNAFFPAMALMVLVGCSTPSPVQKAQRVKVDPLRSLNMEALC
                     KDQAAKRYNTGEQKIDVTAFEQFQGSYEMRGYTFRKEQFVCSFDADGHFLHLSMR"
BASE COUNT          864 a         1007 c          959 g          900 t
ORIGIN      
        1 ctcataaaat taatatatga gataatcttt attcagcaga agattattaa aggttgctgt
       61 attatttagc gataataaaa aaagcctgcc agatggcagg ctttttaata acggcgttat
      121 tactgcaaca gcgaaatatc cgcaacgcgc aggaacagtt cgcgcagttt ctccagcatg
      181 gtcagacggt tgagacgcaa ttctttgtca tcaaccatga ccatcacttt atcgaagaaa
      241 gcatcaaccg gctcacgcag ctctgccagt tcgaccagcg catcctggta acgaccttcc
      301 gcaaagtacg gctccagctt gtcacgtagc accacaacct gcatcgccag tttaatttct
      361 tccggctctt tcagggtaga ggcattcacg cggtcgctca gcacttcgtc agatttcgcc
      421 agaatgttag atacacgttt gttcgccgcc gccagtgcag cagctgcatc cagggtacgg
      481 aaatgcgata ccgctttcat acgggcatcg aaatcagccg gacgagtcgg acgacgcgcc
      541 agtaccgcct ggatggtgtc aacggtgtaa ccttcgtcct gataccaggc gcggaagcga
      601 ccgagcataa agtcgataac atcatcaacc acgttggcgt tagtcagctt atcgccatac
      661 agacgcactg cttcttcggt cagcgtttgc agatcaaggt tgaggttctt ctcaacgata
      721 attcgcagca cgccaagtgc ggcacgacgc agcgcaaacg ggtctttgtc gcctttcgga
      781 tgctgaccga taccgaagat acccgccaga gtatccatct tatcagcaat cgccagcgca
      841 caagctaccg ggttggacgg caggtcatca ccggcaaagc gcggctgata ctgctcattc
      901 agcgcgacgg ctacgtcttc cgcttcgcca tcgtgacacg cgtagtgcat ccccataacg
      961 ccttgggtgt cggtgaactc gaagaccatg ttggtcatca ggtcacactt agacagcagg
     1021 cccgcacggg ttgcgtggtt aacgtcagcg ccaatctgtt cagcaatcca gccagccagc
     1081 gcctggatgc ggtcagtttt gtcacgcagc gtacccagct gttgctggaa cagcacggtt
     1141 tgcaggcgcg gcaggttatc ttccagacgt tttttacggt cggtattgaa gaagaactcg
     1201 gcatccgcca gacgtggacg aacgactttc tcgttaccag agataatttg ctgcggatct
     1261 ttcgattcga tgttggcaac gaagatgaag ttcggcagca gtttgccatc gttcgcatac
     1321 accgggaagt atttctggtc acctttcatg gtgtaaacca gggcttcagc cggcaccgcg
     1381 aggaatttct cttcgaattt tgcggtcaga acgaccggcc actccaccag cgaagccact
     1441 tcttccagca ggctttcgct taagtcagcg ttaccgccaa tcttacgcgc tgcttcttcg
     1501 gcatcggctt taatcttcgc tttacgttct tcgtaatcgg cgatgacttt cccgcgctca
     1561 cgcagaattt ccggatactg atcggcgttg tcgatggtga attccggttc gcccataaag
     1621 cggtggccgc gaatcacgcg atcggactga atgcccagaa tagttgccgg aatgactttg
     1681 tcgcccagca gcagggtcac ggtgtgcacc ggacgcacga agtgcacgtc gcttgcgccc
     1741 caacgcatca gtttcgggat cggcagtttc gccagagaag tcgcaaccat attcggcagc
     1801 agtgcttcgg tgctttcgcc cttcacatgg gcgcgataca gcagccattc gcctttatcg
     1861 gtagtcagac gctcagcctg gtcaacggta ataccgcaac cacgcgccca accttctgcc
     1921 gctttgctcg gtttgccttc agcgtcgaac gcctgggcaa tcgccgggcc gcgtttttcg
     1981 atttcacgat ccggttgcgc ttccgccagg ttagctactt tcagcgccag acgacgcgga
     2041 gcagcaaacc attgaacggt gccgtgtgcg aggccagcgt tatccagctc cacagtaaaa
     2101 ttcgcagcaa aggactcaac caggctgcgc agtgcttttg gtggcagctc ttcagtgccg
     2161 atttccacca gaaaagtttt ctcagacata gccgcctctt acttatcttt gttgcacatc
     2221 gggaagccga gggcttcacg ggaagcgtag tatgcttctg ccactgcttt ggtcagggtg
     2281 cgaatgcgca gaatgtagcg ctgacgctcg gtgacggaga tggctttacg cgcatccagc
     2341 aggttgaagc tgtgggcggc tttcagaata cgctcgtagg ctggcagcgg cagcggattt
     2401 tccagcgcca gcagctgctg cgcttctttc tcgtactgct caaagcaggt gaacaggaag
     2461 tccacatccg cgtattcgaa gttgtaagtg gactgctcca cttcgttctg atggaacacg
     2521 tcgccgtagg tggttttacc cagcgggccg tcgctccaga ccaggtcgta aacgctgtct
     2581 acgccctgaa tgtacatggc cagacgttcc agaccgtagg tgatctcgcc ggtaaccggt
     2641 ttacactcca gaccaccaac ctgctggaag taagtgaact gcgtcacttc catgccgttt
     2701 agccacactt cccagcccag tccccaggca cccagagtcg ggttttccca gttatcttcc
     2761 acgaaacgga tgtcgtgaat agtcgggtcc atgcccagct ctttcagaga accgaggtac
     2821 agctcctgaa tattgtccgg cgatggctta atgaccacct ggaactgata gtagtgctgt
     2881 aaacggttgg ggttttcgcc gtagcgacca tcggtcgggc gacgagaagg ctgaacataa
     2941 gcagccgcca tcggttctgg ccccagcgcg cgcagacagg tcattgggtg agaggttccc
     3001 gcgccgactt ccatgtccaa tggttgaaca atggtgcagc cctggcgagc ccagtaatcc
     3061 tgtaaggtca ggatcaagcc ctggaaggtc ctggtatcaa acttttgcat attatttcgt
     3121 gctggatacg tgtggattta aaggaaggga tcagtatacc cgctggatgg aagatataca
     3181 gtacgaaacg ggaaaaagca gggcttaacg catggaaaga tgcaaaaaat ggccatctgc
     3241 gtcaaaagaa cagacaaact gctctttacg gaaggtataa ccgcgcattt catagcttcc
     3301 ctggaactgt tcgaaggcgg tgacgtcgat tttttgctcg ccggtgttat aacgttttgc
     3361 cgcctgatcc ttgcataacg cttccatatt caacgaacgc agaggatcaa cctttacccg
     3421 ttgtgctttc tgcacgggtg acggtgtaga acaacccact agcaccataa gcgccattgc
     3481 cggaaagaaa gcgttcatca tcattaaatt accgtctggt ttgcaggtga gtcttattat
     3541 ttatatcggt atagtggctg atatcttacg aatttcctta agcctctata agctgtagtg
     3601 ataaaactca gattattcca gtgcgccaac caaatgattt atcggtcaga ctttttttaa
     3661 ccagatacag agacacagat gcaggtaatg ctgccaactt actgatttag tgtatgatgg
     3721 tgattttaag
//
LOCUS       DADMJE010000240         3724 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.243, whole genome shotgun sequence.
ACCESSION   DADMJE010000240 DADMJE010000000
VERSION     DADMJE010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3724)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3724)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3724
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.243"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            37..264
                     /locus_tag="JN001_003965"
     CDS             37..264
                     /locus_tag="JN001_003965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YceK/YidQ family lipoprotein"
                     /protein_id="HAY9055011.1"
                     /translation="MRLIVVSIMVTLLSGCGSIISRTIPGQGHGNQYYPGVQWDVRDS
                     AWRYVTILDLPFSLVFDTLLLPIDIHHGPYE"
     gene            complement(265..639)
                     /locus_tag="JN001_003966"
     CDS             complement(265..639)
                     /locus_tag="JN001_003966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309456.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acidic protein MsyB"
                     /protein_id="HAY9055012.1"
                     /translation="MTMYATLEEAIDAAREEFLADNPGIDAEDANVQQFNAQKYVLQD
                     GDIMWQVEFFADEGEEGECLPMLSGEAAQSVFDGDYDEIEIRQEWQEENTLHEWDEGE
                     FQLEPPLDTEEGRAAADEWDER"
     gene            complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JN001_003967"
                     /pseudo
     CDS             complement(722..1946)
                     /gene="mdtG"
                     /locus_tag="JN001_003967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415571.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdtG"
     gene            complement(2118..3038)
                     /locus_tag="JN001_003968"
     CDS             complement(2118..3038)
                     /locus_tag="JN001_003968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LpxL/LpxP family Kdo(2)-lipid IV(A)
                     lauroyl/palmitoleoyl acyltransferasee"
                     /protein_id="HAY9055013.1"
                     /translation="MTNLPKFSTALLHPRYWLTWLGIGVLWLVVQLPYPVIYRLGCGL
                     GKLALRFMKRRAKIVHRNLELCFPEMSEQERRKMVVKNFESVGMGLMETGMAWFWPDR
                     RIARWTEVIGMEHIRDVQAQKRGILLVGIHFLTLELGARQFGMQEPGIGVYRPNDNPL
                     IDWLQTWGRLRSNKSMLDRKDLKGMIKALKKGEVVWYAPDHDYGPRSSVFVPLFAVEQ
                     AATTTGTWMLARMSGACLVPFVPRRKPDGKGYQLIMLPPECSPPLDDAETTAAWMNKV
                     VEKCIMMAPEQYMWLHRRFKTRPEGVPSRY"
     gene            3263..3724
                     /locus_tag="JN001_003969"
                     /pseudo
     CDS             3263..3724
                     /locus_tag="JN001_003969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415573.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
BASE COUNT          915 a          952 c          945 g          912 t
ORIGIN      
        1 cgttatgccg gtattttttt acggaagagg tatcaaatgc gtttaattgt ggtgagcatc
       61 atggtgacct tgctgagtgg ctgtggcagc attattagtc gcactatacc ggggcagggg
      121 catggcaacc aatattatcc cggtgtgcaa tgggatgtgc gtgactccgc ctggcgttat
      181 gtcacaatcc ttgatctgcc attctccctg gtttttgata ctttactgct gccgatcgac
      241 attcatcatg gcccgtatga gtgattaacg ttcatcccac tcatcagctg ctgcgcgtcc
      301 ttcctcggta tccagcggtg gctcaagctg aaattccccc tcgtcccatt catgtaatgt
      361 attctcttcc tgccactcct ggcgtatctc tatctcatca tagtcgccat caaaaacact
      421 ttgcgcggct tcaccgctaa gcataggtaa acattcacct tcttcccctt cgtcggcaaa
      481 aaactcaact tgccacatga tgtcgccgtc ctgcaaaacg tatttttggg cattgaactg
      541 ttgcacattc gcatcttcgg cgtcgatgcc ggggttgtct gcaagaaatt cttcgcgtgc
      601 agcgtcaatg gcttcttcaa gcgttgcgta catggtcatc acgattctcc ctttgagttg
      661 atgaggtttc agggaaaagg atagctgatt ctccgctttt gcaagtatga aaggcgaaaa
      721 atcagttcga tacctggggt attcgacgac gacgtagact gttccatgaa tagactgcgt
      781 tgaataacac tacgccagcg gtgacgagaa ataccgctct gaaaccgtag ttcgctgaaa
      841 tcgctgctcc catcaatggt ccggtaacgt tgccaatatc acgaaacgat tggttatagc
      901 tgaagatacg cccggcgatc tggttgctcg agttgtaaac caacaatgtc tgtacggcgg
      961 ggagtagtgc accatcggcg gcaccgagca aaaaacgtaa aatcccaagt tgcaatggcg
     1021 tctgaacgta agacattggg atcaacagca gtacagaaaa gatcagcgct gtaatcagga
     1081 tcttttcggg tccgattcga tcgccaagtt tgccgagtcg tggtgcactt agcagagccg
     1141 ccacgcctgg caccgaggcg atcatgccac tgataaaggc gacgttactg acgttacccg
     1201 ccagttcgcg gacatacagc gtcagaatgg gggcaattga gcccgtcgcc acctggatga
     1261 ttaacgtagt gacaaacagg ctgagtacca gtttcgggtt tttaagtgat gtcaccactt
     1321 cccgcatgtg cagcatctct tttttgctga ccggctggaa tttttctctg atgcaaaaca
     1381 gggtgacgaa aaagcagagt atgagcacac tggtggtaat aaagaatacc ggacgtaagc
     1441 cgtagctatc ggcgagcagg ccgccagcca ttgggccgag caacgcacca ccaacgccgc
     1501 ctgtggagag cgtacccagc gcccagccgc ttttattacg cggtacttgt gtggcgataa
     1561 gagcattagc gttggggaca aatccgccaa gtaacccaag aagcgcccgc aggatcaaaa
     1621 actgccagat attttgtgcc agccccatca acaccatcac gatgcccatg ccgagggcag
     1681 agcgtaatag catgagtttt cggcctttac ggtcggcgag tccaccccaa aacggtgagg
     1741 cgatggccga aaataaaaat gtaatgctga agacaatacc ggaccatatt cagggcggag
     1801 tgaccggtaa cgccaagctg ctcaacgtag aggggtaaga agggcattac cagactgaag
     1861 gcggcaccgg taagaaaaca gcctagccag gcgacgatca ggtttcgttt ccagtttata
     1921 ggggtgtcat tttcacaggg tgacatagca atccgctgtt ggtgcgccag gcgcggtgaa
     1981 cataagaaga aaagataagc acactaatta tgcgcccgac ttccaggggg cgcaatccag
     2041 agagctttta tcgctaaatc agggggattt gctgtggtaa tgccggatgc cattctgaag
     2101 catccggcag gggagattta atagcgtgaa ggaacgcctt ccgggcgtgt tttaaagcga
     2161 cggtgtaacc acatatactg ctctggtgcc atcatgatgc atttttcgac cactttgttc
     2221 atccacgcgg cggtagtttc ggcatcatcc agtggcggag aacactctgg cggcagcata
     2281 atcaattgat accctttgcc atctggctta cggcgtggaa cgaagggcac cagacatgcg
     2341 ccggacatcc gtgccagcat ccaggttccg gtcgtggtcg cagcctgctc aacggcaaat
     2401 aacgggacga aaacgcttga gcgcgggccg taatcatgat ccggtgcgta ccagaccact
     2461 tcgccttttt tcagggcttt aatcatgcct tttaaatctt tgcggtcgag catcgattta
     2521 tttgagcgca aacggcccca ggtttgtagc cagtcaatca gtggattatc gttcgggcgg
     2581 taaacgccaa tccccggttc ctgcatacca aactgccgcg cacccagctc cagtgtcaga
     2641 aaatggatgc caactaacag gatgccgcgt ttttgcgcct gcacgtcacg aatgtgttcc
     2701 atgccgatca cttccgtcca gcgcgcgatt cggcggtccg gccagaacca cgccatgccg
     2761 gtttccatca ggcccatgcc aacggattcg aaattcttca ccaccatttt acggcgttct
     2821 tgttcgctca tttccgggaa gcacagttcc aggttgcgat gcacaatttt tgcgcgtcgt
     2881 ttcataaaac gtaacgccag ttttcctaat ccacaaccga ggcggtagat aaccgggtag
     2941 ggcaattgca cgactaacca aagtacgcca atacccaacc aggttaacca ataacgcgga
     3001 tgaagcagtg cggtggagaa cttgggtaga ttcgtcatat caatcctgtt tttcaaccta
     3061 ttcgggcaat tgtatgtatt gtcgcatttt ttcgcccgca accaaaattt gtggctgaag
     3121 actgggcgaa attgccgcgc ttgtaaataa caaataattt ttaatgcgca aatgtagcgt
     3181 aaaatgtgtg gatgttaatt atcgataatt gctatatcat gccgcggatt tttactttcc
     3241 catctcgcag gaaccgtaca ccatgccagt gttacacaac cgcatttcca acgacgcgct
     3301 aaaagccaaa atgttggctg agagcgaacc gcgaaccacc atttcgtttt acaagtattt
     3361 ccacatcgcc gatcctaagg cgacccgtga cgctttatat cagctgttta ccgcgctgaa
     3421 tgtttttggg cgagtgtatc tggcgcatga gggcattaac gcgcaaatca gcgtacctgc
     3481 gagcaatgtt gaaacatttc gcgcgcagct ctgccttcga cccggcttta gagggtttac
     3541 gcctgaatat cgcgttggat gatgacggga aatccttctg ggtactgcgc atgaaggtac
     3601 gtgatcgcat tgttgccgac ggtattgacg atcctcactt tgatgccagc aatgttggtg
     3661 agtatctgca agcggcggaa gtgaacgcca tgcttgacga tcccgatgca ctatttatcg
     3721 acat
//
LOCUS       DADMJE010000241         3685 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.244, whole genome shotgun sequence.
ACCESSION   DADMJE010000241 DADMJE010000000
VERSION     DADMJE010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.244"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(279..566)
                     /locus_tag="JN001_003970"
     CDS             complement(279..566)
                     /locus_tag="JN001_003970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055014.1"
                     /translation="MNEVVNSGVMNIASLVVSVVVLLIGLILWFFINRASSRTNEQIE
                     LLEALLDQQKRQNALLRRLCEANEPEKADKKTIESQKSVDDEDIIRLVAER"
     gene            complement(641..784)
                     /gene="mgrB"
                     /locus_tag="JN001_003971"
     CDS             complement(641..784)
                     /gene="mgrB"
                     /locus_tag="JN001_003971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoP/PhoQ regulator MgrB"
                     /protein_id="HAY9055015.1"
                     /translation="MKKFRWVVLVVVVLACLLLWAQVFNMMCDQDVQFFSGICAINQF
                     IPW"
     gene            943..1182
                     /locus_tag="JN001_003972"
     CDS             943..1182
                     /locus_tag="JN001_003972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_588456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055016.1"
                     /translation="MRFIIRTVMLIALVWIGLLLSGYGVLIGSKENAAGLGLQCTYLT
                     ARGTSTVQYLHTKSGFLGITDCPLLRKSNIVVDNG"
     gene            complement(1325..2116)
                     /gene="kdgR"
                     /locus_tag="JN001_003973"
     CDS             complement(1325..2116)
                     /gene="kdgR"
                     /locus_tag="JN001_003973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012132042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding transcriptional regulator KdgR"
                     /protein_id="HAY9055017.1"
                     /translation="MANADLDKQPDSVSSVLKVFGILQALGEEREIGITELSQRVMMS
                     KSTVYRFLQTMKTLGYVAQEGESEKYSLTLKLFELGARALQNVDLIRSADIQMREISR
                     LTKETIHLGALDEDSIVYIHKIDSMYNLRMYSRIGRRNPLYSTAIGKVLLAWRDRDEV
                     KQILEGVEYKRSTERTITSTEALLPVLDQVREQGYGEDNEEQEEGLRCIAVPVFDRFG
                     VVIAGLSISFPTLRFSEERLQEYVAMLHTAARKISAQMGYHDYPF"
     gene            2293..3666
                     /locus_tag="JN001_003974"
     CDS             2293..3666
                     /locus_tag="JN001_003974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416342.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9055018.1"
                     /translation="MPKVQADGLPLPQRYGAILTIVIGISMAVLDGAIANVALPTIAT
                     DLHATPASSIWVVNAYQIAIVISLLSFSFLGDMFGYRRIYKCGLVVFLLSSLFCALSD
                     SLQMLTLARVIQGFGGAALMSVNTALIRLIYPQRFLGRGMGINSFIVAVSSAAGPTIA
                     AAILSIASWKWLFLINVPLGIIALLLAMRFLPPNGSRASKPRFDLPSAVMNALTFGLL
                     ITALSGFAQGQSLTLIAAELVVMVVVGIFFIRRQLSLPVPLLPVDLLRIPLFSLSICT
                     SVCSFCAQMLAMVSLPFYLQTVLGRSEVETGLLLTPWPLATMVMAPLAGYLIERVHAG
                     LLGALGLFIMAAGLFSLVMLPASPADINIIWPMILCGAGFGLFQSPNNHTIITSAPRE
                     RSGGASGMLGTARLLGQSSGAALVALMLNQFGDNGTHVSLMAAAILAVIAACVSGLRI
                     TQPRSRA"
BASE COUNT          924 a          904 c          815 g         1042 t
ORIGIN      
        1 taaaataaga aaaattgatg aatgagcaaa aaaatcaaga gagaaacgtt tcgctaataa
       61 ataataccac gcttaatcac aaatccgatg taaacatcct aataaattaa tgaggaaaat
      121 atctttttct gatatcccgt tacgcaaata aataatatga taattatttg aagtcagacc
      181 agagttttaa tttgaagcag ttgcaccatg acagtgcgta taatcaggat gaattgagta
      241 acccttcaac gacggggtta ctcaagattg aggaaggatt atcgttcggc gaccaggcga
      301 ataatatctt cgtcatcaac cgatttttga ctctcaatgg tctttttatc tgctttctct
      361 ggttcgtttg cttcgcacaa acgacgtaac agtgcatttt gacgtttttg ctgatccagc
      421 aacgcctcaa gcagttcaat ctgttcgtta gtccgtgaac tggcacgatt gataaaaaac
      481 cacaagatga gcccgataag aagaactacc accgatacaa ccaaagacgc aatgttcatc
      541 acgcctgaat ttacaacttc gttcatttca ccacctctga gtagaggcgc tattctacca
      601 ctgctggaga ggaagaaaat ctagtgctga aaaaatgata tcaccacggg ataaactggt
      661 taatggcaca aattccgctg aaaaattgta catcctgatc gcacatcatg ttgaatacct
      721 gcgcccaaag cagcaagcaa gccaacacca cgacaaccag aacgacccat cgaaactttt
      781 tcactccaat ctccgcttca cctaccttat gtcattaaac tagcatgcgt tagttaaaca
      841 gcgcctaact atgtcgatat tcgtgctttt tcggaatgag tagcttgctt cagcgcatat
      901 tgccgctacg attaagcgaa cataaaaaga gaagaggttg taatgcgatt catcattcgc
      961 acagttatgc tgatagcact ggtatggata ggattattac tcagcggata tggcgttttg
     1021 attggaagca aagagaatgc cgcaggatta ggtttgcaat gtacctatct gactgccaga
     1081 ggcaccagca cggtacaata cttgcacact aaaagtggtt tcttggggat aacagattgc
     1141 ccactgttac gtaaaagcaa tatcgtggtc gataatggtt aagggtaata aataaccaga
     1201 ttctcactca tgagtaaaat attcttatag caagcgcgtt taatataacg caccttcaac
     1261 tttatttttc tcatgctaaa taaagaacct gtctgtttga tattccgaca ggttcttact
     1321 ctcatcagaa cggatagtcg tgataaccca tttgggcaga aattttgcgc gctgcggtat
     1381 gcaacattgc gacatattcc tgtaaacgct cttcagagaa acgcaacgtc gggaaggaga
     1441 tgctcaaacc ggcaatgacc acgccaaagc gatcaaatac cggtaccgca atgcatcgca
     1501 gcccttcttc ctgctcttcg ttatcttcgc catacccctg ctcgcgcacc tggtccagaa
     1561 cgggtaataa cgcttctgta ctggtgatgg tccgctcggt actgcgttta tactccacgc
     1621 cctcaagaat ttgcttcact tcatcgcgat cgcgccatgc cagcagtacc ttaccaatcg
     1681 cggtgctgta cagcggatta cgacgcccaa tccgtgaata catgcgcaaa ttgtacatag
     1741 agtcaatttt gtgaatgtaa acaatactgt cttcgtccag tgcgccgagg tggatagttt
     1801 ctttggtcag gcgggagatc tcacgcatct ggatatctgc gctacgaatt aaatcgacgt
     1861 tttgtaacgc gcgagcgccc agttcaaaca atttcagggt cagggaatat ttctccgact
     1921 ccccttcctg cgccacataa cctaaggttt tcatggtctg taaaaagcga taaacggtgc
     1981 tttttgacat catgacgcgc tgcgacagct cggttatccc tatttcgcgc tcttcaccca
     2041 gcgcctgcaa aatgccaaaa acttttagca cggaagatac agaatcaggc tgtttatcca
     2101 gatctgcgtt agccatttat cacctcattg cgagtgtttt ataaaaatca gaactgtttt
     2161 ttattataat ttcgcaccag gggggtcgca atccatcttt tgccggttag ttacaattct
     2221 gcgacatcca ccgtgaatat cagtgctaga atcatacccc tgttgattat tcaccaaaga
     2281 tataaaattc ctatgccaaa agttcaggcc gacggcctgc cattgcccca gcgatacggt
     2341 gcgatattaa ccattgtgat tggtatttcg atggctgtcc ttgacggcgc aatcgccaac
     2401 gtcgccctgc caacaatcgc cacggacctt catgccacgc cagccagttc catctgggta
     2461 gtgaacgcct atcaaatcgc cattgtcatc tccctgctct cgttttcgtt tctgggcgat
     2521 atgtttggct atcgacgtat ttataaatgc ggtctggtcg tttttctgtt gtcttcactg
     2581 ttctgcgccc tttctgattc gctgcaaatg ctcacccttg cgcgtgtcat acaaggtttc
     2641 ggcggtgcag cgttgatgag cgttaatacc gcacttatcc gcctgatcta tccacaacgt
     2701 tttctgggga gagggatggg cataaactcg tttattgttg ccgtctcttc tgctgccggg
     2761 ccgacaattg ctgcagcaat cctctccatc gcatcctgga aatggttatt tttaatcaac
     2821 gtaccgttag gtattatcgc cctgcttctg gcgatgcgtt ttctgccacc caatggttct
     2881 cgcgccagta aaccccgttt cgacctgccc agcgccgtga tgaacgcgtt aaccttcggc
     2941 ctgcttatca ctgcgttgag tggtttcgct caggggcaat cgctgacgtt aattgctgcg
     3001 gaactggtgg taatggttgt tgttggtatt ttctttattc gccgccagct ttctcttccc
     3061 gtaccgctgc taccggtgga tttactgcgt atcccgctgt tttcactttc tatttgcaca
     3121 tctgtttgct ctttctgcgc acaaatgctg gcaatggttt ccctgccctt ttacctgcaa
     3181 accgtgctcg ggcgtagtga agtcgaaaca ggtttacttc tgacaccgtg gccgttagca
     3241 acgatggtga tggctccgtt ggcaggctat ttgattgaac gcgtacatgc aggattgctg
     3301 ggtgctctag ggttgttcat catggctgcg gggctttttt ccctggttat gctgcccgcg
     3361 tcacctgcgg atatcaatat tatctggccg atgatcttat gtggcgctgg atttggcttg
     3421 ttccagtcac ccaataacca caccattatt acctccgctc ctcgcgaacg tagcggtgga
     3481 gccagtggca tgttaggaac ggctcgtcta ctgggtcaga gtagcggcgc ggcactggtg
     3541 gcgctgatgc taaatcagtt cggtgataat ggtacgcacg tttcgctgat ggctgcggct
     3601 attctggcag tgattgctgc ctgtgtcagt ggtttacgta tcactcagcc acgatccagg
     3661 gcataaaaaa agcgcgtcga tcagg
//
LOCUS       DADMJE010000242         3679 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.245, whole genome shotgun sequence.
ACCESSION   DADMJE010000242 DADMJE010000000
VERSION     DADMJE010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3679
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.245"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(168..482)
                     /gene="fliE"
                     /locus_tag="JN001_003975"
     CDS             complement(168..482)
                     /gene="fliE"
                     /locus_tag="JN001_003975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HAY9055019.1"
                     /translation="MSAIQGIEGVISQLQATAMSARAQDSLPQPTISFAGQLHAALDR
                     ISDTQTAARTQAEKFTLGEPGVALNDVMTDMQKASVSMQMGIQVRNKLVAAYQEVMSM
                     QV"
     gene            697..2355
                     /gene="fliF"
                     /locus_tag="JN001_003976"
     CDS             697..2355
                     /gene="fliF"
                     /locus_tag="JN001_003976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body M-ring protein FliF"
                     /protein_id="HAY9055020.1"
                     /translation="MNATAAQTKSLEWLNRLRANPKIPLIVAGSAAVAVMVALILWAK
                     APDYRTLFSNLSDQDGGAIVSQLTQMNIPYRFSEASGAIEVPADKVHELRLRLAQQGL
                     PKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELSRTIETIGPVKGARVHLAMPKPS
                     LFVREQKSPSASVTVNLLPGRALDEGQISAIVHLVSSAVAGLPPGNVTLVDQGGHLLT
                     LSNTSGRDLNDAQLKYASDVEGRIQRRIEAILSPIVGNGNIHAQVTAQLDFASKEQTE
                     EQYRPNGDESHAALRSRQLNESEQSGSGYPGGVPGALSNQPAPANNAPISTPPANQNN
                     RQQQASTTSNSGPRSTQRNETSNYEVDRTIRHTKMNVGDVQRLSVAVVVNYKTLPDGK
                     PLPLSNEQMKQIEDLTREAMGFSEKRGDSLNVVNSPFNSSDESGGELPFWQQQAFIDQ
                     LLAAGRWLLVLLVAWLLWRKAVRPQLTSRAEAMKAVQQQAQAREEVEDAVEVRLSKDE
                     QLQQRRANQRLGAEVMSQRIREMSDNDPRVVALVIRQWINNDHE"
     gene            2348..3343
                     /gene="fliG"
                     /locus_tag="JN001_003977"
     CDS             2348..3343
                     /gene="fliG"
                     /locus_tag="JN001_003977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HAY9055021.1"
                     /translation="MSNLTGTDKSVILLMTIGEDRAAEVFKHLSQREVQTLSAAMANV
                     TQISNKQLTDVLAEFEQEAEQFAALNINANDYLRSVLVKALGEERAASLLEDILETRD
                     TASGIETLNFMEPQSAADLIRDEHPQIIATILVHLKRAQAADILALFDERLRHDVMLR
                     IATFGGVQPAALAELTEVLNGLLDGQNLKRSKMGGVRTAAEIINLMKTQQEEAVITAV
                     REFDGELAQKIIDEMFLFENLVDVDDRSIQRLLQEVDSESLLIALKGAEQPLREKFLR
                     NMSQRAADILRDDLANRGPVRLSQVENEQKAILLIVRRLAETGEMVIGSGEDTYV"
     gene            3336..>3679
                     /locus_tag="JN001_003978"
     CDS             3336..>3679
                     /locus_tag="JN001_003978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416450.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HAY9055022.1"
                     /translation="MSDNLPWKTWTPDDLAPPQAEFVPMVEPEETIIEEAEPSLEQQL
                     AQLQMQAHEQGYQAGIAEGRQQGHEQGYQEGLAQGLEQGLAKAKSQQAPIHARMQQLV
                     SEFQTTLDALDSV"
BASE COUNT          925 a          967 c         1029 g          758 t
ORIGIN      
        1 cttcctatga gcaaagcgaa gacaaaacat gttatcgcgt ttacggatcg tggatggcag
       61 aaaactttca ggatcaggta tccattttaa accagaaata gggtgagttt gtcccatcca
      121 tgccccacgc gggcagatgg gatgtaatta ccaacaggtt acaaaaccta cacctgcatg
      181 gacatcactt cctgatacgc cgccaccagc ttattacgca cctgaatccc catttgcata
      241 gaaactgagg ctttttgcat atcggtcatc acatcgttta acgccacgcc gggttcaccg
      301 agggtgaatt tttctgcctg cgtgcgggcg gctgtttgtg tatcgcttat gcgatcgagc
      361 gcggcgtgca gctgcccggc aaaactaatg gtcggttgcg gcagtgaatc ctgcgcacgc
      421 gcactcatcg ccgtagcctg taactggctg ataacccctt caatcccctg tatcgctgac
      481 attttcgtct cctggataat ttctggtagc aaagcctacc agtaagtcaa taagacaaag
      541 gcgctaaata gcaacaaaaa aacgggttta ttggcggata gaaaaaaacg aaagcacaaa
      601 taatggcagc gtcaattttt cgagtttgct gacccgggag tgagtcttgt tccactttgc
      661 caataacgcc gtccataatc agccacgagg tgcgcgatga atgcgactgc agcccagaca
      721 aaatctcttg agtggcttaa tcgcctgcgt gcgaatccga aaattccatt gattgttgcc
      781 ggttccgcgg cagtggcggt catggtcgca ctgatcctgt gggcgaaagc ccccgactac
      841 cgcacattat tcagcaatct ttccgatcag gatggtggcg caattgtcag ccaactgacg
      901 caaatgaata ttccttaccg cttcagcgaa gccagcggcg ctattgaagt tccggcagat
      961 aaagttcacg agctgcgtct gcgcctggcg caacaaggtt tgcccaaagg cggcgcggtc
     1021 ggtttcgaac tactcgatca ggaaaagttt ggtatcagcc agttcagcga acaggtgaat
     1081 tatcagcggg cgctggaagg cgagctttct cgtaccatcg aaactatcgg cccggtaaaa
     1141 ggggcgcgcg tacatctggc aatgccgaaa ccgtctttat tcgtccgtga acaaaaatcc
     1201 ccttctgcat cggtgacggt aaatctatta cccggccgcg cactcgatga agggcaaatt
     1261 agcgccattg tacatctggt ttccagcgcg gttgctggtc tgccgccggg gaacgtcacg
     1321 ctggtggatc agggtggaca tctgttaacc ctgtccaata ccagcgggcg cgatcttaat
     1381 gacgctcagt tgaaatatgc cagcgatgtc gaaggccgga ttcagcggcg tattgaagcg
     1441 atcctgtcgc caattgttgg taacggtaat attcacgccc aggtcacggc gcaactggac
     1501 ttcgccagta aagaacaaac ggaagaacag tatcgcccta acggtgatga atctcatgcg
     1561 gcgcttcgtt cacgccagct taatgagagc gagcaaagcg gttccggtta tccgggcggc
     1621 gtaccggggg cgttgtcgaa tcaaccggca cctgcgaata acgcgccaat cagcacgcct
     1681 ccggcaaatc aaaataaccg ccagcagcag gcgagcacca ccagcaatag cgggccgcgt
     1741 agcacacagc ggaatgaaac cagtaactac gaagtcgatc gcaccattcg tcataccaaa
     1801 atgaacgtgg gcgatgtgca acgtctgtca gtcgcggtag tggtaaatta caaaaccttg
     1861 ccagacggta aaccattgcc tctcagcaac gaacagatga agcaaattga agatctgacc
     1921 cgcgaggcga tgggcttttc tgaaaaacgc ggtgactcgc tcaatgtcgt taactcgccg
     1981 ttcaatagca gtgacgaaag cggcggagaa ctgccgttct ggcaacagca agcgtttatc
     2041 gatcagttgc tggctgccgg tcgctggttg ctggtactgc tggtggcgtg gctgctgtgg
     2101 cggaaagcgg tacgcccgca gttaacaagt cgcgccgagg cgatgaaagc tgtacagcaa
     2161 caggcgcagg cccgtgagga agtggaagat gcggtggaag tccgcctgag caaagacgaa
     2221 caactccaac aacgacgcgc taaccaacgt ctgggggcag aagtcatgag ccagcgtatc
     2281 cgtgaaatgt ctgataacga tccgcgcgtg gtggcgctgg tcattcgcca gtggataaat
     2341 aacgatcatg agtaacctga caggcaccga taaaagcgtc atcctgctga tgaccattgg
     2401 cgaagaccgg gcggcagagg tgttcaagca cctctcccag cgcgaagtgc aaaccctgag
     2461 cgctgcaatg gcgaacgtca cgcagatctc caacaagcag ctaaccgatg tgctggcgga
     2521 gtttgagcaa gaagctgaac agtttgccgc actgaatatc aacgccaacg attatctgcg
     2581 ttcggtattg gtcaaagctc tgggtgagga acgtgccgcc agcctgctgg aagatattct
     2641 cgaaactcgc gataccgcca gcggtattga aacgctcaac tttatggagc cgcagagtgc
     2701 cgccgatctg attcgcgatg agcatccgca aattatcgcc accattctgg tgcatctgaa
     2761 gcgcgcccag gccgccgata ttctggcgtt gttcgatgaa cgtctgcgcc acgacgtgat
     2821 gttgcgtatc gccacctttg gcggcgtgca gccagccgcg ctggcggaac tgaccgaagt
     2881 actgaatggc ttgctcgacg gtcagaatct caagcgcagc aaaatgggcg gcgtgagaac
     2941 ggcagccgaa attatcaacc tgatgaaaac tcagcaggaa gaagccgtta ttaccgccgt
     3001 gcgcgaattc gacggcgagc tggcgcaaaa aattatcgac gagatgttcc tgttcgaaaa
     3061 tctggtggat gtcgacgatc gcagcattca gcgtctgttg caggaagtgg attccgaatc
     3121 gctgttgatc gcgctgaaag gggccgagca gccactgcgc gagaaattcc tgcgcaatat
     3181 gtcgcagcgt gccgccgata ttctgcgcga cgatctcgcc aaccgtggtc cggtgcgtct
     3241 gtcgcaggtg gaaaacgaac agaaagcgat tctgctgatt gtgcgccgcc ttgccgaaac
     3301 tggcgagatg gtaattggca gcggcgagga tacctatgtc tgataatctg ccgtggaaaa
     3361 cctggacgcc ggacgatctc gcgccaccac aggcagagtt tgtgcccatg gtcgagccgg
     3421 aagaaaccat cattgaagag gccgaaccca gccttgagca gcaactggcg caactgcaaa
     3481 tgcaggccca tgagcaaggt tatcaggcgg ggattgccga aggtcgccag caaggtcatg
     3541 agcagggcta tcaggaagga ctggcccagg ggctggagca aggtctggca aaggcgaagt
     3601 ctcaacaagc gccaattcat gcccggatgc agcaactggt cagcgaattt caaactaccc
     3661 ttgatgcgct tgatagtgt
//
LOCUS       DADMJE010000243         3644 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.246, whole genome shotgun sequence.
ACCESSION   DADMJE010000243 DADMJE010000000
VERSION     DADMJE010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3644)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3644)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3644
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.246"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(623..2332)
                     /locus_tag="JN001_003979"
     CDS             complement(623..2332)
                     /locus_tag="JN001_003979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858142.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ShET2/EspL2 family type III secretion system
                     effector toxin"
                     /protein_id="HAY9055023.1"
                     /translation="MPLNKTFSSSIFSTKNSLSTDMSVNRDNRTITSSIMRVSNSSEL
                     IQFKNKTAPYFSEKRNVKVNINGVAKDIYGRQIVCRHLASYWEMNFMETNGKVNYQLL
                     STPDAIAKNVCLEKTEDFSKSPAYIYFVENKKWGTVITNFFYNMKKNGDFVRTLSACT
                     LNHQMALGLKIKRVQESEKWVVQFFDPNRTVTHKRTVFTCDSHFELSQLSAKDFFDDF
                     YWKIYGLEQPGQVIFEDRHNSPLTNTVKLLPDELINSRVIYHAITKNLTEVLFILMEK
                     YKNGEISQSKLVNLLATRSSDGTPAFYIALQNGCSDIIQVYGKILNMCNLSQETILTL
                     LAAVGANNVPGLCMSFMNGHVDTIKAYGEIVFKTPLTSDKRLYLLAAKDSHDLPGLFF
                     ALQNGHADSIRMFGSLLNKKMLSSEQIKELLKVKHGLFMALQNGHTKAIMAYGDILKI
                     LPPHQEYIDELLWIKNPNGTSGLFMAFYNGHTETIRAFCNILKNYSFTTRRLVEMLSA
                     TNKDGIPGVFVSVVNRDKETILEYCRIIKENNLEPDTIAEQFSKKMKKTFIEIINRFN
                     HFL"
     gene            complement(2764..3483)
                     /locus_tag="JN001_003980"
     CDS             complement(2764..3483)
                     /locus_tag="JN001_003980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III secretion system effector
                     phosphothreonine lyase"
                     /protein_id="HAY9055024.1"
                     /translation="MPIKKPCLKLNLDSLNVVRSEIPQMLSANERLKNNFNILYNQIR
                     QYPAYYFKVASNVPTYSDICQFFSVMYQGFQIVNHSGDVFIHACRENPQSKGDFVGDK
                     FHISIAREQVPLAFQILSGLLFSEDSPIDKWKITDMNRVSQQSRVGIGAQFTLYVKSD
                     QECSQYSALLLHKIRQFIMCLESNLLRSKIAPGEYPASDVRPEDWKYVSYRNELRSDR
                     DGSERQEQMLREEPFYRLMIE"
BASE COUNT         1081 a          733 c          654 g         1176 t
ORIGIN      
        1 aagcttgata caactggtct ggtatataca gtttctttga gtgcggttac gtccacagag
       61 gtaacggtaa aagtaacccc ttgtcgggac cactccgacc gcgcacagag gcattttcat
      121 cgctgacagg ccgcattgcc tcgcagggct ggaggaggag cggtgatatc cggacgaccg
      181 taccggctta cgccgggctt cggcggtttt actcctctgc catgtgcaac aacggagtgc
      241 cgccttacat gccgctggcg cggcatatcc tggtaacatt tttgttgata ccaccttccg
      301 gccttatcct gaccagtggg ctttcctggc atcgatgata ccgatgaacg cgcatgatat
      361 tgagccgacg atattacggg caactggaaa tactcaccct ctggatgtga cctttatcca
      421 tgaagaagat ttggccatac catggaaacc tgaacaatca tcagtttacg cccatgtaaa
      481 cccctacggg atatttgaac tcgatatgga aacaaggttg ccaatcgagg tggttgcctg
      541 aaagttggca gttacccggt cactacacct tgttggagtg aacatatcaa aaacaggtag
      601 ttacacaatt taaattacag tctcataaaa aatgattaaa tctatttatt atttcaataa
      661 acgttttttt catcttcttt gaaaattgtt ctgctatagt atccggttcc agattgttct
      721 cttttattat tctacaatac tctaatattg tttctttgtc tctatttact acagatacaa
      781 atacaccagg aataccatct ttattagttg cggacagcat ttcgaccaat cgtcttgtgg
      841 taaaactata gttttttaga atattacaaa aggcacgtat tgtttcggta tggccattat
      901 aaaatgccat aaaaagtcct gatgtaccgt tgggattttt tatccataat aattcatcta
      961 tatattcctg gtgagggggg agtattttta gtatatctcc atacgccata atggcctttg
     1021 tgtgcccatt ttgaagtgcc ataaacaacc catgctttac tttcaataat tctttaattt
     1081 gttcactact aagcattttc ttattaagca gacttccgaa catacgaata ctatctgcat
     1141 gtccattctg caatgcaaaa aataacccag gtaaatcatg gctgtctttc gcagctaata
     1201 gatataatct cttatcggaa gttaacgggg ttttaaagac tatttcccca taggctttta
     1261 ttgtgtctac atgtccgttc ataaaagaca tgcataaacc cggcacattg tttgccccta
     1321 ccgcagcaag caatgtaagt attgtttctt gactaagatt gcacatattt aatatcttac
     1381 catatacttg aataatgtct gaacatccgt tttgaagtgc tatataaaat gcaggagtac
     1441 catcagagct tctcgtggcc agaaggttca ccagtttaga ttgagaaatt tcaccatttt
     1501 tgtatttttc catcagtata aataatactt ctgtcagatt ctttgttatc gcatgatata
     1561 taactctgga attgatcaat tcatctggta aaagtttcac tgtgtttgtt agaggggaat
     1621 tatgcctatc ttcaaatatt acctgcccgg gttgctccag accataaatt ttccaataaa
     1681 aatcatcaaa aaaatcctta gcggataatt gactcagttc gaaatggcta tcacaagtaa
     1741 atacagtacg tttatgagta acagttcgat taggatcgaa aaactgaaca acccattttt
     1801 cactttcttg tacgcgcttt attttcaacc ctaacgccat ttggtggttt aatgtgcatg
     1861 ctgataatgt tctgacaaag tctccatttt ttttcatgtt ataaaaaaaa ttagtaataa
     1921 ctgttcccca ctttttattt tccacaaaat aaatataagc tggtgatttt gaaaaatctt
     1981 ccgttttttc caaacataca ttttttgcaa tagcatcagg ggtgctaaga agctgatagt
     2041 ttaccttccc atttgtttcc ataaaattca tttcccaata ggaagctagg tgacggcaaa
     2101 ctatttgtct tccatatata tcttttgcca ctccatttat atttaccttc acatttctct
     2161 tttctgaaaa ataaggtgct gttttattct taaactgaat tagttcactg gagtttgaga
     2221 ccctcataat agaacttgtt attgttctat tatctctgtt aacagacata tctgttgata
     2281 acgaattttt tgttgaaaat atactagatg aaaatgtttt atttaacggc atagaagaca
     2341 accatagaga tgttataata ctattagatt gcagttacta atagtaaaag cctccttaca
     2401 aggaggtagc ttattcagaa tgctcctata agatagcgag ctcgtcaacg atacagatga
     2461 tctgattata ttgtgcaaaa ggagaacagg aaaataggca ctggaaaaga tgaaggcctg
     2521 atgggagcat taactaatgc aaaatccgac aggttaatat cccgaaaagc aatcaaacga
     2581 ctcaaacagg agatgcacgc tgaagtggtg gacaactgtt cggatttcag atgagtagct
     2641 cagcagttta tgagccgaat gctctgtcac ggtcaggaat caggctgcat acgctgtgcc
     2701 aaatctaatc gtagttattc taaccagttt tccagctaca aggtggtgta gctggcatct
     2761 tctctactct atcatcaaac gataaaatgg ttcctctcgt aacatttgct cttgcctttc
     2821 acttccatct cgatcgcttc gtagttcatt acgatagctg acatatttcc agtcttcagg
     2881 tctaacatct gacgccggat actccccggg agcgattttg cttcttaata gattagactc
     2941 gagacacatt ataaattgtc gtattttatg aagtaataaa gcactatatt gcgagcattc
     3001 ctgatctgat tttacatata gcgtaaactg agctcctatc cccacacgag attgctgaga
     3061 aactcgattc atatcagtta tcttccattt atctatagga ctgtcctctg aaaataataa
     3121 accagacaaa atttggaatg ccagaggaac ttgctcccta gctatactaa tatgaaactt
     3181 gtccccaaca aaatccccct tactctgagg attttcacga catgcatgaa taaacacatc
     3241 tccactatgg ttcacaatct ggaatccttg gtacatgaca gaaaaaaatt gacatatatc
     3301 agagtaagtt ggcacgttcg atgctacttt gaaatagtac gctgggtatt gccgtatttg
     3361 gttgtacaat atattgaagt tatttttcaa tctttcattc gcagaaagca tctgcggtat
     3421 ttcagacctc acaacattca aagaatctaa atttagtttt agacagggct tttttatggg
     3481 catagaaaac gtcctctata aaatagatat attatcttat attgattgtt tatcatcttt
     3541 tataaaacga tacattatat gtaatgtatg taagcgtaag ggtcttctcc gatcatggtg
     3601 ggaaggctta gaacgccata ttcagtttcc catagtggaa catc
//
LOCUS       DADMJE010000244         3600 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.247, whole genome shotgun sequence.
ACCESSION   DADMJE010000244 DADMJE010000000
VERSION     DADMJE010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3600)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3600)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3600
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.247"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            232..543
                     /locus_tag="JN001_003981"
     CDS             232..543
                     /locus_tag="JN001_003981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000483533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
                     /protein_id="HAY9055025.1"
                     /translation="MFNVITHPAALDELLELPDNLRGRMTRLIERLEQEGNKMKMPHS
                     RVIGGGLFELRVGDKNIARTLYAYATGNEIYLLHAFVKKTQKTPTKAIEIARMRLKEM
                     N"
     gene            543..830
                     /locus_tag="JN001_003982"
     CDS             543..830
                     /locus_tag="JN001_003982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000865085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HAY9055026.1"
                     /translation="MKVKGVPFSQVKQKLLSTPEAVKGYEDADKELEMVEMLYEMREK
                     AGLTKSALAERMGLRPSAISRLESNPLGASMKTLTKYAHACGATIDIHAVY"
     gene            complement(1367..2554)
                     /locus_tag="JN001_003983"
     CDS             complement(1367..2554)
                     /locus_tag="JN001_003983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
                     /protein_id="HAY9055027.1"
                     /translation="MLPRFADIFQQGNRWLNWLEKQPEGAVRPVVIESVTKIMACGTT
                     LMGYTQWCCSSPDCCHTKKVCFRCKSRSCPHCGVKAGAQWIQYLLSLVPDCPWQHIVF
                     TLPCQYWSLVFHNRWLLAEMSRIAADVILEICHQADVEPRIFTVIHTWGRDQQWHPHI
                     HLSTTAGGVTSGHTWKNLHFYARKVMSMWRYRITRLLSRKYPDLVMPDALAAEGSSKR
                     EWNRFLDTHYRRGWNVNVSRVMDNATHVAVYFGSYLKKPPVPVSRLEHYAGQDEIGLR
                     YNSHRTKREEYLLMSGDEFMERFSWHVADKGFRMVRYYGFLSPAKRRLLEEVVYIITE
                     TVRKTAMQITWRGMYQRLLKVDPLKCVLCGSQMRFTGLKRGYRLAEQVLMHEPLARMR
                     WCG"
     gene            complement(2554..2919)
                     /locus_tag="JN001_003984"
     CDS             complement(2554..2919)
                     /locus_tag="JN001_003984"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055028.1"
                     /translation="MARSAKPRKRKPASQRSKLPRYVVKLHEDDFFDEEDAEVLRFDS
                     FDDAVECCADLNIPFFVDAGNKKLVFWFVRVDDEGYPEIARCTEREFATILSGISAGG
                     MYCPECGTVHWPDGVAPPF"
     gene            2938..3333
                     /locus_tag="JN001_003985"
     CDS             2938..3333
                     /locus_tag="JN001_003985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858230.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055029.1"
                     /translation="MTLPVFITVIADHDKPQPSGCLLELQLNKGEYRHKLPRWIFFAN
                     QGEFTTGDYEEIMNKASALSLVSNAILYWNTSRISNIVEGLRENGEVIDDDVLAHISL
                     LPYKHVLPNGTYFVDGEPYGTEPTERAKP"
     gene            3363..3446
                     /locus_tag="JN001_003986"
                     /pseudo
     CDS             3363..3446
                     /locus_tag="JN001_003986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052676.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family transcriptional regulator"
     gene            3446..3541
                     /locus_tag="JN001_003987"
                     /pseudo
     CDS             3446..3541
                     /locus_tag="JN001_003987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858351.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          946 a          935 c          848 g          871 t
ORIGIN      
        1 aaggtgaaat ctgtcaatca gtaccggctt acgccgggct tcggcggttt tactcctgtg
       61 ccatatgcaa caacggagtg ccgccttcca tgccgctaac gcggcatcaa aaaatccctc
      121 ttctccagtt gcccccctcc gaactcagag tgtattttca tttattgatg aaatttactg
      181 tttgcgcaat tttcctgttt tagtgtattt tgtcattctg gaggctataa tatgtttaat
      241 gtgattactc acccggccgc actggatgaa cttctagaat taccagacaa tctgcgtggt
      301 cgtatgacca gactgattga acggctggaa caggaaggta acaaaatgaa aatgcctcac
      361 agccgtgtaa ttggcggagg gctttttgaa ctgagagtcg gggataaaaa tatcgcaagg
      421 acactgtacg cttatgcaac gggtaacgaa atctatctgc tgcatgcatt tgtgaaaaaa
      481 acgcaaaaga caccaacgaa agctattgaa attgccagga tgcgtctgaa ggagatgaac
      541 tgatgaaagt aaaaggtgtt ccattcagcc aggtaaagca aaaactactc agtactccag
      601 aagctgtcaa agggtatgag gatgctgaca aagaactgga gatggtggaa atgttatacg
      661 aaatgagaga aaaagcggga ttaacaaagt cagcactggc cgaacgaatg gggttacgcc
      721 cgtcagccat cagtcgcctg gaaagtaacc ctttaggggc cagcatgaaa actttgacaa
      781 aatatgctca tgcctgtggc gcaaccatcg atattcacgc tgtctattga ggggtccgct
      841 tggaattcgg aaaataaacc acgttaagac tattttttag ataaatgact ttcaggaatc
      901 gccaagatgg cgggataaca gcggttttgg tgtcctaaat cgtacaattc tgtacatcca
      961 cgcaagggaa tgtacggaag taagccagac ggttatcgga cggtcagaac atttcgtaca
     1021 gcctttacgt tcagtgagtt agctggcctg gacgtaacca ctcgttagct caattctctt
     1081 agcgtgggaa aatttccgaa ttccaagcgg acccctttat ccttgccccg ctgaatgagg
     1141 aaacgctgtt ccgggggatt atgctgaacg tcttccgttc atcgatagga attaaaaccc
     1201 caaaaagatt aaaaaacacc acaaaacgga tgtttcttca acaccacttt tgctcatatg
     1261 aacggaaccg acgattaaac tggatggctc tgattgattc agggtatgaa tggcggtttt
     1321 ttgctccgtt tccctcaaaa tggacgctac ttaccctctg cggctctcag ccgcaccacc
     1381 gcatccgggc cagcggctca tgcatcagga cctgctctgc cagacggtag ccccgcttca
     1441 gccccgtaaa acgcatctga ctcccgcaca gcacgcactt cagcgggtca accttcagta
     1501 acctctgata catccctctc caggtgattt gcatcgccgt ttttctcact gtctccgtta
     1561 tgatgtacac cacttcttcc agtaaccgcc gtttcgccgg actcagaaaa ccgtagtacc
     1621 tcaccatacg gaacccctta tccgccacat gccaggagaa cctttccatg aactcatctc
     1681 cactcatcaa caggtattct tcccgttttg ttcggtgact gttgtaacgc agtccgattt
     1741 catcctgacc ggcataatgc tccagacgac tcaccggcac cggtggcttt ttcaggtaag
     1801 agccaaagta caccgccaca tgggtggcat tatccatcac ccgggatacg ttgacattcc
     1861 agccacggcg gtaatgcgtg tccaggaagc gattccattc ccgtttactg cttccttctg
     1921 ctgccagcgc atccggcatc accaggtcag ggtatttccg tgacagtaac cgtgttatcc
     1981 ggtagcgcca catgctcatc accttacggg cgtaaaaatg aagatttttc caggtgtggc
     2041 ccgacgtcac accaccggca gttgtcgata aatggatatg cggatgccac tgctggtcac
     2101 gcccccatgt gtggatcacc gtgaatatcc tcggctccac atctgcctga tggcagattt
     2161 ccagtatcac atccgctgca atgcggctca tctctgccag caaccaccgg ttgtggaaca
     2221 ccagggacca gtactggcag ggtaacgtga acacaatatg ctgccatggg cagtcgggga
     2281 ccaggctcag cagatactgt atccactgtg cgccagcctt caccccgcag tgcgggcagg
     2341 agcggctttt acaccggaag cagacctttt ttgtatggca acagtccggt gatgaacagc
     2401 accactgtgt ataccccatc agtgtggtcc cgcacgccat gattttggtc accgactcaa
     2461 tcaccaccgg acgtactgcc ccttccggct gcttctccag ccagttaagc cagcggtttc
     2521 cctgctgaaa gatatcggca aaacggggaa gcatcagaag ggcggggcga ctccgtccgg
     2581 ccagtgaacc gtgccacact ccgggcagta cataccgccg gcgctgatac cggaaagaat
     2641 ggtcgcaaat tcccgctccg tgcagcgggc aatttccgga tacccttcgt catcaacacg
     2701 tacaaaccag aagaccagtt ttttgtttcc ggcatccaca aagaacggaa tattcaggtc
     2761 tgcgcaacac tcaacggcat catcaaaact atcaaagcgc agaacttctg cgtcttcttc
     2821 gtcaaaaaaa tcatcttcgt gaagcttcac gacatagcgg ggaagtttgc ttctttgaga
     2881 ggcgggttta cgtttacggg gtttagctga acgggccata taaccacctg aaagacaatg
     2941 acattgcctg tttttataac ggtaattgca gaccatgaca agccgcagcc gtcaggctgc
     3001 ctactcgagc ttcagctcaa taaaggcgaa tatcgacata aattaccccg atggatcttt
     3061 tttgcaaatc agggtgaatt cacgaccggt gattacgaag aaatcatgaa taaggccagc
     3121 gccctgagtc tggtatcgaa tgcaatcctg tactggaata catcaagaat aagcaatatt
     3181 gttgaagggt tacgtgaaaa tggtgaggtt attgatgatg acgtattagc ccatatatca
     3241 ttactgccct ataaacacgt attacctaat ggtacttatt ttgttgatgg agaaccttac
     3301 ggtactgagc ctaccgaaag agcaaaaccg taagtttctg ttcaaatgct cccgctggtc
     3361 catccggaca gattatcgac catcaggctg tacaggcctg ggcggacagc ctcagtactg
     3421 acaatccgtt accggtgcca cgctgatgga acagaagtgg accagtaagg cgctttctga
     3481 tttggcgcgg ttatatgatt ttctggtgct ggccagtaaa cctgctgccg ccagaatggt
     3541 acacgtatag gaaattgaaa aaccagacga taccgctgtc cacgccttat gccacgtgag
//
LOCUS       DADMJE010000245         3546 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.248, whole genome shotgun sequence.
ACCESSION   DADMJE010000245 DADMJE010000000
VERSION     DADMJE010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3546)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3546)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3546
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.248"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            83..727
                     /locus_tag="JN001_003988"
     CDS             83..727
                     /locus_tag="JN001_003988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HAY9055030.1"
                     /translation="MKSRVYSWGYERGYVKANPCAGVSKFKAKNRERYVTDKEYQAVL
                     SVAPLPVFIAMEIAYLCAARVSDVLSLKWEQIGNDGIFIQQGKTGKKQIKAWSPRLQA
                     AIEKAKQLPTSAYVISNQYGNRYMYKGFNEMWVEARNRAGKISGILTDFTFHDLKAKG
                     ISDYEGSSRDKQLFSGHKTEGQVLIYDRKVKVSPTLDVPLPENIPSNSTCDFCH"
     gene            complement(755..844)
                     /locus_tag="JN001_003989"
     tRNA            complement(755..844)
                     /locus_tag="JN001_003989"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(808..810),aa:Ser,seq:cga)
     gene            938..1735
                     /gene="mtfA"
                     /locus_tag="JN001_003990"
     CDS             938..1735
                     /gene="mtfA"
                     /locus_tag="JN001_003990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DgsA anti-repressor MtfA"
                     /protein_id="HAY9055031.1"
                     /translation="MIKWPWKVQESAHQTALPWQEALSIPLLTCLTEQEQSKLVTLAE
                     RFLQQKRLVPLQGFELDSLRSCRIALLFCLPVLELGLEWLDGFHEVLIYPAPFVVDDE
                     WEDDIGLVHNQRIVQSGQSWQQGPIVLNWLDIQDSFDASGFNLIIHEVAHKLDTRNGD
                     RASGVPFIPLREVAGWEHDLHAAMNNIQEEIELVGENAASIDAYAASDPAECFAVLSE
                     YFFSAPELFAPRFPSLWQRFCQFYQQDPLQRLHHANDTDSFSATNVH"
     gene            1836..1911
                     /locus_tag="JN001_003991"
     tRNA            1836..1911
                     /locus_tag="JN001_003991"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1869..1871,aa:Asn,seq:gtt)
     gene            2198..3334
                     /locus_tag="JN001_003992"
     CDS             2198..3334
                     /locus_tag="JN001_003992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016246071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055032.1"
                     /translation="MLARSGKVSMATKKRSGEEINDRQILCGMGIKLRRLTAGICLIT
                     QLAFPMAAAAQGVVNAATQQPVPAQIAIANANTVPYILGALESAQSVAERFGISVAEL
                     RKLNQFRTFARGFNNVRQGDELDVPAQVSEKKLTPPPGNSSDNLEQQIASTSQQIGSL
                     LAEDMNSEQAANMARGWASSQASGAMTDWLSRFGTARITLGVDEDFSLKNSQFDFLHP
                     WYETPDNLFFSQHTLHRTDERTQINNGLGWRHFTPTWMSGINFFFDHDLSRYHSRAGI
                     GAEYWRDYLKLSSNGYLRLTNWRSAPELDNDYEARPANGWDVRAESWLPAWPHLGGKL
                     VYEQYYGDEVALFDKDDRQSNPHAITAGLNYTPFPLMTFSAEQR"
     gene            3338..3546
                     /locus_tag="JN001_003993"
                     /pseudo
     CDS             3338..3546
                     /locus_tag="JN001_003993"
                     /inference="COORDINATES: protein motif:HMM:NF023351.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          963 a          827 c          850 g          906 t
ORIGIN      
        1 gtgccggcag attccataaa accagaacac atccgtcgat acatggacaa gagaggggaa
       61 cagagtaaaa cgcaagccaa ccatgaagtc ccgcgtttac agttgggggt atgagcgagg
      121 gtacgtgaag gctaacccat gtgcaggtgt aagtaaattc aaggccaaaa accgcgaacg
      181 atatgtaacc gacaaagaat accaggcagt attaagcgtt gcacctcttc ctgtttttat
      241 cgcaatggaa attgcctatc tgtgtgcagc gagggtttcc gatgtgttat cgctgaaatg
      301 ggagcagatt ggaaacgacg ggatctttat ccagcaaggg aaaacaggaa aaaaacagat
      361 aaaagcatgg agtccacgat tacaggcggc gatcgaaaaa gcaaaacagt taccaacatc
      421 cgcctatgta atcagcaatc aatacggcaa ccgatatatg tacaaaggct ttaacgaaat
      481 gtgggtagaa gcaagaaatc gcgcaggcaa aatttcaggt attttaaccg acttcacctt
      541 tcatgatctg aaggcgaaag gaatttcaga ctatgaagga agcagtcggg ataagcaact
      601 tttctctggt cacaaaaccg aggggcaagt gctaatctat gacaggaagg ttaaagtttc
      661 accgacactt gatgtcccgt tacctgaaaa tattccaagt aattccacgt gtgatttttg
      721 tcactgactt aatgatgtat aagtgattga attttggcgg agagaggggg atttgaaccc
      781 ccggtggagt tgcccccact ccggttttcg agaccggtcc gttcagccgc tccggcatct
      841 ctccgttcag atggttgcca tgatgccagg aaatttggca ttttaacagt ccctgtccgt
      901 gcaattttgt tcaagtgacg agtttgcgag caaaacgatg attaagtggc cctggaaagt
      961 acaagaatca gcacatcaaa ctgcccttcc ctggcaggaa gcactatcga tccccctttt
     1021 aacgtgtctg acggaacagg aacaaagcaa attagtcact cttgccgaac gttttttaca
     1081 gcaaaagcgg cttgttcctt tacagggctt tgaactggat tcattaagaa gctgccggat
     1141 agcacttcta ttttgcctac ccgttctgga gttaggactg gaatggctgg atggttttca
     1201 tgaagtctta atttatcctg cgccatttgt ggtcgatgat gaatgggaag acgatatcgg
     1261 tctggtgcat aaccaacgta ttgttcagtc aggtcagagc tggcagcaag ggcctatcgt
     1321 tttgaactgg ttggatatac aagattcttt tgatgcttct ggttttaacc tgattattca
     1381 tgaagtcgct cataagctgg acacccgtaa cggcgatcgc gccagcggag ttccctttat
     1441 tccgttgcgt gaggttgctg gctgggaaca cgatcttcat gctgcaatga acaacattca
     1501 ggaagaaatc gaattggttg gcgagaatgc ggcgagcatt gatgcttatg cagccagcga
     1561 tcctgctgaa tgttttgccg tactttctga atatttcttt agcgccccag aactttttgc
     1621 tcctcgtttc ccttcattgt ggcaacgttt ctgccaattt tatcaacaag atcctttgca
     1681 gagactgcat cacgctaatg atacagactc gttttcggcg acgaatgttc attaattaac
     1741 aactttgcat attaattaac caattgaaat gacttatgaa atttagtgtt gacagacaag
     1801 gtaccgctaa gtaatatgcg ccccgttcac acgattcctc tgtagttcag tcggtagaac
     1861 ggcggactgt taatccgtat gtcactggtt cgagtccagt cagaggagcc aaattctaaa
     1921 aattcgcttt tttagcgcaa tgtcactgac cttagttgaa cattgttttt taacggatag
     1981 cgggttttta acatcttaag cgccctcgac ctttatggtt gagggcgttt tgctatgaac
     2041 gccatcacca ttttcccctc gattataaaa cttgagttat tcagtagtct cccctcttgc
     2101 aactcacacc caaaactgcc taacgaaaag ttattaattt tcaatcatat tgctatcagt
     2161 atttacattt tttcgctgtg ctagaaaggg cgcatttatg ttagctcgtt cagggaaggt
     2221 aagcatggct acgaagaaga gaagtggaga agaaataaat gaccgacaaa tattatgcgg
     2281 gatgggaatt aaactacgcc gcttaactgc gggtatctgt ctgataactc aacttgcgtt
     2341 ccctatggct gcggcagcac aaggtgtggt aaacgccgca acccaacaac cagttcctgc
     2401 acaaattgcc attgcaaatg ccaatacggt gccctacatc cttggagcgc tggaatcggc
     2461 ccaaagcgtt gccgaacgtt tcggtatttc ggtggctgag ttacgcaaac tcaaccagtt
     2521 tcgtacgttt gctcgaggtt ttaataatgt ccgccagggt gatgaactgg atgtcccggc
     2581 acaagttagt gaaaaaaaat taaccccgcc gccgggtaat agcagtgaca acctcgagca
     2641 acagatagcc agtacttcac agcaaatcgg gtctctgctc gccgaagata tgaacagcga
     2701 gcaagcggca aatatggcgc gtggatgggc ctcttctcag gcttcaggcg caatgacaga
     2761 ctggttaagc cgcttcggta ccgcaagaat cacgctgggc gtggatgaag attttagcct
     2821 gaagaactcc cagttcgatt ttctccatcc gtggtatgaa acgcctgata atctcttttt
     2881 cagtcagcat actctccatc gtactgacga gcgtacgcag attaacaacg gcttaggttg
     2941 gcgtcatttc actcccacat ggatgtcagg catcaacttc tttttcgacc acgatcttag
     3001 ccgttaccac tcccgcgccg gcattggcgc ggagtactgg cgcgactatc taaaattaag
     3061 cagtaacggc tatttgcgac tgaccaactg gcgcagcgca cctgaactgg acaacgatta
     3121 tgaagcacgc ccggccaatg gctgggatgt acgcgcagaa agctggctac ccgcctggcc
     3181 gcaccttggc ggtaaactgg tctatgaaca gtattatggc gatgaagtgg ccctgttcga
     3241 taaagacgat cggcaaagta atcctcatgc cataaccgct ggacttaact ataccccctt
     3301 cccgctgatg accttcagcg cggagcaacg ctagggtaaa cagggcgaaa atgacacccg
     3361 ttttgccgtc gattttacct ggcaacctgg cagcgcaatg cagaaacagc ttgacccgaa
     3421 tgaagtcgct gcacggcgta gccttgcagg cagccgttat gatctggtgg atcgcaacaa
     3481 caatatcgtt ctggaatatc gcaaaaaaga actggttcgc ctgaccctga cagaccccgt
     3541 gacagg
//
LOCUS       DADMJE010000246         3529 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.249, whole genome shotgun sequence.
ACCESSION   DADMJE010000246 DADMJE010000000
VERSION     DADMJE010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3529
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.249"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(293..988)
                     /locus_tag="JN001_003994"
     CDS             complement(293..988)
                     /locus_tag="JN001_003994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactate utilization protein C"
                     /protein_id="HAY9055033.1"
                     /translation="MDNRGEFLNNVAQALGRPLRLEPQAEDAPLNNYANERLTQLNQQ
                     QRCDAFIQFASDVMLTRCELTSEAKAAEAAIRLCKELGDQSVVISGDTRLEELGISER
                     LQQECNAVVWDPAKGAENISQAEQAKVGVVYAEYGLTESGGVVLFSAAERGRSLSLLP
                     ESSLFILRKSTILPRVAQLAEKLHQKAQAGERMPSCINIISGPSSTADIELIKVVGVH
                     GPVKAVYLIIEDC"
     gene            complement(981..2408)
                     /locus_tag="JN001_003995"
     CDS             complement(981..2408)
                     /locus_tag="JN001_003995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster-binding protein"
                     /protein_id="HAY9055034.1"
                     /translation="MSIKTSNTDFKTRIRQQIEDPIMRKAVANAQQRIGANRQKMVDE
                     LGHWEEWRDRAAQIRDHVLSNLDAYLYQLSEKVTQNGGHVWFAKNKEDATRYILQVAQ
                     RKNARKVVKSKSMVTEEIGVNHVLQDAGIQVIETDLGEYILQLDQDPPSHVVVPAIHK
                     DRHQIRRVLHERLGYEGPETPEAMTLFIRQKIREDFLSAEIGITGCNFAVAETGSVCL
                     VTNEGNARMCTTLPKTHIAVMGMERIAPTFAEVDVLITMLARSAVGARLTGYNTWLTG
                     PREAGHVDGPEEFHLVIVDNGRSEVLASEFRDVLRCIRCGACMNTCPAYRHIGGHGYG
                     SIYPGPIGAVISPLLGGYKDFKDLPYACSLCTACDSVCPVRIPLSKLILRHRRVMAEK
                     GITAKAEQRAIKMFAYANSHPGLWKVGMMAGAHAASWFINGGKTPLKFGAISDWMEAR
                     DLPEADGESFRSWFKKHQAQEKKNG"
     gene            complement(2419..3138)
                     /locus_tag="JN001_003996"
     CDS             complement(2419..3138)
                     /locus_tag="JN001_003996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(Fe-S)-binding protein"
                     /protein_id="HAY9055035.1"
                     /translation="MNVNFFVTCIGDALKSRMARDSVLLLEKLGCRVNFPEKQGCCGQ
                     PAINSGYIKEAIPGMKNLIAALEDNDDPIISPAGSCTYAVKSYPTYLADEPEWASRAE
                     KVAARMQDLTSFIVNKLGVVDVGASLQGRAVYHPSCSLARKLGVKDEPLTLLKNVRGL
                     ELLTFAEQDTCCGFGGTFSVKMAEISGEMVKEKVGHLMEVRPEYLIGADVSCLLNISG
                     RLQREGQKVKVMHIAEVLMSR"
BASE COUNT          897 a          967 c          740 g          925 t
ORIGIN      
        1 gccttgtcaa aaaaatggta gatgaatacc aacaaaactc tgggcagtaa taaacaacat
       61 tctgatagag agtgcctgta taaagctgaa gtgacaatga ccgggaaggg aacccgtttt
      121 caggaatgga tgcctgtctt tttcactgta aatatcctgg cattactaat gccaggatat
      181 ttacagaaga gcagcataac catgacggaa cggggttaag tcaggttgtc cttaacgcta
      241 ttttcaacct cgtatgcctt cttcaggttt atgttcagat ctcatatctc tctcagcaat
      301 cctcaataat cagatacacc gctttcaccg ggccatgaac cccgacgact ttgataagct
      361 caatatccgc cgttgaacta gggccgctaa tgatgttaat gcaggacggc attcgttcac
      421 cggcctgcgc tttctgatgc aatttttctg cgagttgcgc tacacgcggc aggattgtgc
      481 ttttacgcag gataaaaaga gaagattccg ggagcaggct caatgaacgc ccgcgctcgg
      541 cggcggaaaa aagaaccacg cctcccgatt cggttaaacc atattcagca tacacaacac
      601 ccactttagc ctgctctgcc tgcgagatat tctcggcacc tttcgccgga tcccaaacaa
      661 cggcattgca ttcctgctgc aaacgttcac taatccccaa ttcctccagc ctcgtgtcac
      721 cgctaatcac gaccgactga tctcccagct ctttacacag acgtattgca gcttctgccg
      781 ccttcgcctc gctggtcagc tcacagcgcg tcaacataac atcgctggca aactgaataa
      841 acgcgtcaca gcgctgctgt tggttaagtt gggtaagccg ctcgttagca tagttgttaa
      901 gcggcgcatc ttctgcttgc ggttcaagtc gcagcgggcg acccagtgcc tgagcaacgt
      961 tattcaaaaa ttcgcctcga ttatccattc tttttctcct gcgcctgatg tttcttaaac
     1021 caactacgga aactctctcc gtcagcttca ggaagatcgc gtgcttccat ccagtcgcta
     1081 atcgcgccaa atttgagtgg tgttttgccg ccattgataa accagcttgc cgcatgagcg
     1141 ccggccatca tcccgacttt ccacaatcct ggatgactat tggcataagc gaacattttt
     1201 atcgcccgtt gctctgcttt tgcggtgatc cctttttcag ccatcacccg acgatgacgc
     1261 aaaatcagtt ttgacagcgg aatacgcacc ggacacacgc tgtcacaagc agtgcataaa
     1321 gagcaggcgt agggtaaatc tttaaaatct ttatagccgc caagtagcgg agaaatcacc
     1381 gcaccaattg gccctggata aatagagcca tatccatgac cgccaatatg gcgatatgcc
     1441 ggacaagtat tcatacaagc cccgcagcga atacagcgca gcacatcccg aaattcagag
     1501 gccagcacct cagaacgccc gttatcgaca ataaccagat gaaactcttc aggaccatca
     1561 acgtgccccg cttcgcgcgg tcctgtcagc caggtgttgt atcccgtcaa acgtgcacca
     1621 acggcactgc gcgccagcat ggtgatcaat acatctacct cggcaaacgt gggggcaata
     1681 cgctccattc ccatcactgc aatatgcgtt ttaggcagcg tggtacacat tcgcgcatta
     1741 ccttcattgg tcaccaggca taccgaacct gtctctgcca ccgcgaaatt acagccggta
     1801 atacctattt cagcactgag gaaatcttcg cggatttttt gccggatgaa taaggtcatc
     1861 gcttcaggcg tttccggccc ctcatagccc agacgttcgt gtagcactcg acggatctga
     1921 tggcgatctt tatgaattgc cgggaccaca acatgagatg gcggatcttg atccagctgg
     1981 agaatatatt cacccagatc ggtttcaatc acctgaatgc cagcatcctg caacacatga
     2041 ttgacaccaa tctcttcggt caccatcgat ttagatttca ccaccttccg ggcatttttg
     2101 cgttgggcaa cctgtaaaat gtagcgggta gcgtcttctt tgttttttgc aaaccagacg
     2161 tgaccgccgt tttgcgtcac tttttctgag agctggtaca gataagcgtc gagattactc
     2221 agaacatgat cacgtatctg ggcggcccga tcgcgccact cctcccagtg ccccaattca
     2281 tcgaccattt tttgccgatt tgccccaata cgctgctgcg cgtttgccac cgctttgcgc
     2341 atgatcggat cttcaatttg ctgacggatg cgagtcttaa aatctgtatt actggttttg
     2401 atcgacatct ttatatcctc agcggctcat caacacttca gcaatatgca tcactttgac
     2461 tttctgccct tcccgttgta atcgcccact gatgttcagc aggcaactca cgtcagcacc
     2521 aattaaatac tcagggcgga cttccatcag gtgcccaacc ttttctttca ccatctcgcc
     2581 ggatatttcg gccattttga ccgagaacgt gccgccaaat ccgcagcagg tatcctgttc
     2641 agcaaaggtc aacagctcca gtccacgcac atttttcagc agcgtaagtg gctcgtcctt
     2701 cactcccagc ttacgggcca ggctacaaga tgggtgatac acagctctcc cttgcaaact
     2761 ggcacctaca tcgactaccc ctaatttatt aacaataaaa gaggtgagat cctgcatacg
     2821 cgcggcaacc ttttcggcac gtgatgccca ttcaggttca tccgccagat acgtcgggta
     2881 actttttacg gcataggtgc aagagccagc cggtgaaata atgggatcgt cgttatcctc
     2941 cagtgcggcg atcagatttt tcatccctgg aatcgcttct ttgatataac cgctattgat
     3001 cgcaggctga ccgcagcatc cctgtttctc cgggaaattt acgcgacagc cgagtttttc
     3061 cagtagcagc acggagtctc gtgccattct tgatttcagg gcgtcaccaa tacaggtgac
     3121 aaagaaattg acattcacaa ctaatactcc attacttcat gcccatttat gcccgatgtt
     3181 tccccaccac cgggggatca atcatcaata aatatggcgt tcttttttaa ttggctagca
     3241 acatactacc cctcatttgt atgacaaatg ataatctttc acccaaacgt caaatgcaat
     3301 aactaatttt atttctttcg gcatcgctca cattttatgg agaaatcgac gatcattttt
     3361 ggcataagaa atccatttaa aaatggccac atcccttata cctattcaga gctacttatt
     3421 caggggttat tgagatatac actgatggtg tacaaacaaa atcaccgaca ataatcacgt
     3481 atcaagtaat agtcgggatt ttatttaatt gaagcaattt agtttgtat
//
LOCUS       DADMJE010000247         3484 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.250, whole genome shotgun sequence.
ACCESSION   DADMJE010000247 DADMJE010000000
VERSION     DADMJE010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3484)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3484)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3484
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.250"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..1947
                     /locus_tag="JN001_003997"
                     /pseudo
     CDS             1..1947
                     /locus_tag="JN001_003997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="internal stop; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
     gene            complement(1990..2463)
                     /gene="ivy"
                     /locus_tag="JN001_003998"
     CDS             complement(1990..2463)
                     /gene="ivy"
                     /locus_tag="JN001_003998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C-lysozyme inhibitor"
                     /protein_id="HAY9055036.1"
                     /translation="MGRISSGGMMFKAITTVAALVIATSAMAQDDLTISSLAKGETTK
                     AAFNQMVQGHKLPAWVMKGGTYTPAQTVTLGDETYQVMSACKPHDCGSQRIAVMWSEK
                     SNQMTGLFSTIDEKTSQEKLTWLNVNDALSIDGKTVLFAALTGSLENHPDGFNFK"
     gene            2617..3387
                     /gene="yafV"
                     /locus_tag="JN001_003999"
     CDS             2617..3387
                     /gene="yafV"
                     /locus_tag="JN001_003999"
                     /EC_number="3.5.1.111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutaramate amidase"
                     /protein_id="HAY9055037.1"
                     /translation="MPGLKITLLQQPLVWMDGPANLRHFDRQLEGITGRDVIVLPEMF
                     TSGFAMEAAASSLAQDDVVNWMTAKAQQCNALIAGSVALQTESGSVNRFLLVEPGGTV
                     HFYDKRHLFRMADEHLHYKAGNARVIVEWRGWRILPLVCYDLRFPVWSRNLNDYDLAI
                     YVANWPAPRSLHWQALLTARAIENQAYVAGCNRVGSDGNGCHYRGDSRVINPQGEIIA
                     TADAHQATRIDAELSMMALREYREKFPAWQDADEFRLR"
BASE COUNT          778 a          890 c         1001 g          815 t
ORIGIN      
        1 atgattatca aaaaagagta cggctgactg gagttctcag cttatgccca gtctcgcgtg
       61 ctgcaaaaac tctccggcgt gagcgggatc ctggcgatta ccgtcggcgt gccgaactca
      121 ttaggcccgg gcgagctgct gcaacattac ggcactgacg agcagaaaga tcactatctg
      181 ccgcgtctgg cgcgtggtca ggagatccct tgctttgcac tgacaagccc ggaagcgggt
      241 tccgatgcgg gcgcgattcc ggacaccggg attgtctgca tgggcgaatg gcagggccag
      301 caggtgctgg ggatgcgtct gacttggaac aaacgctata ttacgctggc accgattgcg
      361 actgtgcttg ggctggcgtt taaactctcc gacccggaaa agctgctggg tggcgcagaa
      421 gatttaggta ttacctgtgc gctgatcccg accaccacgc cgggcgtgga aattggtcgt
      481 cgccacttcc cgctgaacgt accgttccag aacggaccga cgcgcggtaa agatgtcttc
      541 gtaccgatcg attacatcat cggtgggccg aaaatggccg ggcaaggctg gcggatgctg
      601 gtggagtgcc tctcggtagg ccgcggcatc accctgcctt ccaactcaac cggcggcgtg
      661 aaatcggtag cgctggcaac gggcgcgtat gctcacattc gccgtcagtt caaaatctct
      721 atcggaaaga tggaagggat tgaagagccg ctggcgcgta ttgccggtaa tgcctacgtg
      781 atggatgctg cggcatcgct gattacctac ggcattatgc tcggcgaaaa acctgccgtg
      841 ctgttggcta tcgttaagta tcactgtacc caccgcgggc agcagtcgat tattgatgcg
      901 atggatatca ctggtggcaa aggcattatg ctcgggcaaa gcaacttcct ggcgcgtgct
      961 taccagggcg caccgattgc catcaccgtt gaaggggcta acattctgac ccgcagcatg
     1021 atgatcttcg gacaaggagc gattcgttgc catccgtacg tgctggaaga gatggaagcg
     1081 gcgaagaaca atgacgtcaa cgcgttcgat aaactgttgt tcaaacatat cggtcacgtc
     1141 ggtagcaaca aagttcgcag cttctggctg ggcctgacgc gcggtttaac cagcagcacg
     1201 ccaaccggcg atgccactaa acgctactat cagcacctga accgcctgag cgccaacctc
     1261 gccctgcttt ctgatgtctc gatggcagtg ctgggcggca gcctgaaacg tcgcgagcgc
     1321 atctcggccc gtctggggga tattttaagc cagctctacc tcgcctctgc cgtgctgaag
     1381 cgttatgacg acgaaggccg taatgaagcc gacctgccgc tggtgcactg gggcgtacaa
     1441 gatgcgctgt atcaggctga acaggcgatg gatgatttac tgcaaaactt cccgaaccgc
     1501 gtggttgccg ggctgctgaa tgtggtgatc ttcccgaccg gacgtcatta tctggcacct
     1561 tctgacaagc tggatcataa agtggcgaag attttacaag tgccgaacgc cacccgttcc
     1621 cgcattggtc gcggtcagta cctgacgccg agcgagcata atccggttgg cttgctggaa
     1681 gaggcgctgg tggatgtgat tgccgccgac ccaattcatc agcggatctg taaagagctg
     1741 ggtaaaaacc tgccgtttac ccgtctggat gaactggcgc acaacgcgct ggcgaagggg
     1801 ctgattgata aagatgaagc cgctattctg gtgaaagctg aagaaagccg tctgcgcagt
     1861 attaacgttg atgactttga tccggaagag ctggcgacga agccggtaaa gttgccggag
     1921 aaagtgcgga aagttgaagc cgcgtaattg aataacggag ccgaaaggct ccgtttcttt
     1981 atccgctaat tatttaaaat taaagccatc cggatggttt tccaggctgc cggtcaacgc
     2041 cgcgaacagc accgttttac catcaatcga aagcgcatcg ttcacattca gccaggtgag
     2101 tttctcttgc gacgttttct catcaatagt cgagaacagc cccgtcatct gattagattt
     2161 ctcggaccac atcacagcga tacgttgcga gccacagtca tgcggtttgc acgcgctcat
     2221 cacctgatac gtctcatctc ccaacgttac ggtttgtgcg ggagtataag taccgccttt
     2281 catcacccag gcaggcagct tatgcccttg taccatctga ttaaatgcag ctttggtggt
     2341 ttcgcccttt gcaaggctgc taatggttaa atcatcctgc gccattgcac tggtggcgat
     2401 gaccagagcg gcgactgtcg ttattgcctt aaacatcatt cctcccgagc ttatcctgcc
     2461 catgttatta accttctaaa gcctggcgat aacacgataa tttgcaaatc agatatttcc
     2521 aatatcagca tttgttatca atttattctg cgctaaggca actgcctgat aaggtgttaa
     2581 agttataaaa cccttcgcat aaaggagttg tacaccgtgc ctggtttgaa gattacgctt
     2641 ttgcagcaac cactggtgtg gatggatggc cctgccaacc tgcgtcattt tgatcgtcaa
     2701 ctggaaggta ttaccgggcg cgatgtgatc gttctaccgg agatgtttac cagcggcttt
     2761 gccatggaag cggcagcttc gtcgctagca caagatgacg tagtgaactg gatgacagct
     2821 aaggcgcagc agtgcaatgc gctgatagca ggcagtgttg cattacaaac ggagtctggt
     2881 tcggttaacc gctttttgct ggttgagccg ggcggcacgg tacattttta tgataagcgt
     2941 catctgttcc gcatggcaga tgagcatcta cattataaag cgggcaatgc gcgagtgatt
     3001 gtggaatggc gcggctggcg tattttgccg ttggtgtgct acgacttacg ttttccggtg
     3061 tggtcgcgca atctcaacga ttatgacctc gccatctacg ttgccaactg gcctgctccg
     3121 cgctctctgc actggcaggc attgctgacg gcccgcgcga ttgagaatca ggcgtatgtg
     3181 gcgggatgca atcgcgtcgg cagcgatggc aacggctgcc attatcgcgg tgacagccgg
     3241 gtgattaatc cacaaggcga gattatcgct actgccgacg cgcatcaggc aacgcgcatt
     3301 gatgcggagc tgtcgatgat ggcattgcgg gaatatagag aaaagtttcc ggcatggcag
     3361 gatgcggatg agtttaggtt gcggtgagtg ggggttgtgt ttaaggctgg gggagagtcg
     3421 gggtaagact acgaaagccc gctctccgca aggactgacg ccagatagtt tctgtccata
     3481 gctg
//
LOCUS       DADMJE010000248         3409 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.253, whole genome shotgun sequence.
ACCESSION   DADMJE010000248 DADMJE010000000
VERSION     DADMJE010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3409
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.253"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(20..322)
                     /locus_tag="JN001_004000"
     CDS             complement(20..322)
                     /locus_tag="JN001_004000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000890114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055038.1"
                     /translation="MLEIVLSPVKAQQFTVTLGAQVCTIRLNQRTTGMYIDIIVNGEP
                     CLYGVLCLNNNRIVRYGYLPFQGDLFFTDTEGNSDPDWRGLGSRYRLYWLLPEELI"
     gene            complement(322..1032)
                     /locus_tag="JN001_004001"
     CDS             complement(322..1032)
                     /locus_tag="JN001_004001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000010340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055039.1"
                     /translation="MSFSFDNISLNNFSLSESNVLSAVRGGGVLGLINSVLAPSFGIY
                     YARNDPAGAHQKGGKPFSPDSFVVVEVGAEASVSTVPVEQGAYTTFNKIQRSPELHVT
                     FIVEGWTAFSGSVPNLTNFSTTSRTNVLETLERMRTTAGLYDIETPDKTWTSCDLVKY
                     DYRMRSNNGPTLLTVTAVFQTVMNTGEVSVGSTDKSSPTDNDKAKGAASVKTQPVTAS
                     VTQPSDADRRSATNRGIT"
     gene            complement(1029..3050)
                     /locus_tag="JN001_004002"
     CDS             complement(1029..3050)
                     /locus_tag="JN001_004002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HAY9055040.1"
                     /translation="MAQVLDELVLSLGIDDRDFTAGEQAVHAALNRLTTVMEGVADTF
                     SQGQKKTSESLEKTGKDADKTARRMEDAGKRASRFFSGIRSEILALAGVSLTLGGLKN
                     LVTGFARDLNRLSVESDAFGMKARNLDGWLRAARANNVDEGEMSGAFSRLANAKAAFR
                     AGRSFDPVLQDLFQVAARAGISVDLNTDSTEAIMRKLAVIFPRLTKSEQTAYGNALGF
                     SYAGQQFLGSGHALKDVDEFTSRSQVTPGRTALARKLRKELVELDQTWSGIGMTISTA
                     LMPYALKLSHWLETLGDWMQQHPEEVNRFITTFLNDVESVASLANKAAGELGGWQNVI
                     ITLIGLKVASWVRGLTKALSGPGGLLFAITALYPVVDGLLTSIVGRENKDWLDSHGFF
                     WASDGTFFFNKKEMETYQTKLDVGEKPGNITRAQSPTVWQQGMLDTQASQATGREAAF
                     GESWLQGMRATQEKLGNAMQNRQRPTKTGEALLGWLQPKLSQLEEKYNLPPGLLRSVA
                     ITESRGNQFAVSPAGAMGLFQFMPKTASEFGLRGNDAFDPEKAADAAARKLGGLIRFF
                     HGDLAKALAAYNWGEGNVQRKGLAAAPEETRNYIPRVLANLPYPGAAMAIRSLHPAPV
                     SQSTVTETTHIGTLNVTTTSDNVKGITDDARRRITNSALVSVYSSGVTG"
     gene            complement(3034..3216)
                     /locus_tag="JN001_004003"
     CDS             complement(3034..3216)
                     /locus_tag="JN001_004003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000228829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HAY9055041.1"
                     /translation="MVDYVNVPRTIATVISSGKASKAELDSVLGVQDLWDLLEIIHVD
                     AHNEQVIQENRNGAGT"
BASE COUNT          798 a          993 c          814 g          804 t
ORIGIN      
        1 attttacgtt gtctgtagct catatcagtt cctcaggtaa cagccagtag agccggtacc
       61 gggatccgag cccccgccag tcagggtcac tattcccctc cgtgtcggta aaaaacaggt
      121 ccccctgaaa cggcaggtat ccgtaccgga caatccggtt attattcaga cacagcacgc
      181 catacaggca cggttcacca ttaacaatga tatcgatata catccccgta gtacgctgat
      241 tcaggcgaat ggtgcagacc tgagcgccca gtgtcaccgt aaactgctgg gctttaacgg
      301 gagataaaac aatttccagc atcaggtgat ccccctgttc gtggcacttc gtctgtcagc
      361 gtctgacggt tgtgtcaccg acgccgtaac tggctgcgtt ttaaccgatg cggccccttt
      421 tgctttatcg ttgtccgtgg gagacgactt atccgtactt cccactgaca cctctcctgt
      481 attcattacg gtctgaaata ccgcagtaac cgtcagtaag gtcggaccat tattacttcg
      541 cattcggtag tcatatttca caaggtcgca ggatgtccat gtcttgtccg gcgtctcaat
      601 atcgtagagt cctgccgtgg tacgcatcct ttcaagcgtt tccagcacat tcgtccgcga
      661 ggtggtggaa aaatttgtca ggttcgggac ggatccggaa aaggccgtcc acccctctac
      721 aatgaaagtc acatgcagtt ccggcgatct ctggatttta ttaaaggtgg tataagcccc
      781 ctgctccacg gggacggtgg aaacagaagc ctccgcgccc acctcaacga caacaaaaga
      841 atccggggag aaaggtttgc cacccttctg atgggcacct gccggatcat tccgtgcgta
      901 ataaataccg aatgacggtg ccagtacact attaatgagt cccaggacac cgccgccacg
      961 aactgcactc agtacgttac tttcactgag cgaaaagtta ttcagggaaa tattatcgaa
     1021 agaaaaactc atcctgttac cccgctggaa taaaccgaca caagcgccga attcgtgata
     1081 cgccgacgtg cgtcatcggt aatacccttc acattgtccg acgttgtggt gacattcagt
     1141 gtcccgatat gcgtggtttc cgttacggtg gactgcgata caggcgcagg atggagcgac
     1201 cgtatggcca ttgccgcacc cggataaggc aggttcgcca gcacccgcgg aatatagttg
     1261 cgggtctcct ccggagcagc agccagtccc ttacgctgaa catttccctc tccccagtta
     1321 tatgccgcca gagccttagc cagatcgcca tgaaaaaaac gtatcaggcc accaagtttt
     1381 ctcgcggcgg catcagcggc tttttcggga tcaaaggcat cgttccccct cagaccaaat
     1441 tcactggccg tcttcggcat gaactgaaac agtcccatcg caccagcagg tgagacggca
     1501 aactgattac cacgggattc ggtgatcgca acgctgcgca gcagtccggg cggcaggtta
     1561 tatttttcct ccagttgaga cagtttcggt tgcagccagc ctaacagggc ttccccggtc
     1621 ttcgtcggtc gctggcggtt ttgcatggca ttaccgagtt tttcctgcgt cgcacgcata
     1681 ccctgtagcc aggattcacc gaaggctgct tccctcccgg ttgcctgaga agcctgagta
     1741 tccagcatgc cctgctgcca tactgtgggt gattgtgccc gggtgatgtt gccaggcttt
     1801 tctccgacat ccagttttgt ctgatacgtc tccatctctt tcttattgaa aaagaaagtc
     1861 ccgtctgaag cccagaaaaa accatgtgaa tccagccagt ccttattttc cctgccaaca
     1921 atggatgtca gtaatccgtc aacaaccggg taaagcgccg ttatcgcaaa aagaaggcct
     1981 ccggggccac tgagggcttt tgtcagcccc cgcacccatg acgccacttt cagcccgatc
     2041 agcgtaataa tgacattctg ccagcccccc agttctccgg cagccttatt cgccagggag
     2101 gccactgact caacgtcatt cagaaatgtg gtgataaacc tgttcacttc ctccggatgt
     2161 tgctgcatcc agtcaccgag tgtctccagc cagtggctga gcttcagcgc gtacggcatc
     2221 aacgcggtgc taatcgtcat cccgatgccg gaccaggtct gatcgagctc aacaagctct
     2281 tttcgtagct tacgggccag cgctgtacgc cccggcgtaa cctgcgaacg ggaagtaaat
     2341 tcgtccacat ctttcagcgc atgaccggag ccaagaaact gctgtccggc ataactgaag
     2401 cccagcgcgt tgccgtaggc agtttgttcg gactttgtca gtcgcggaaa aataaccgcc
     2461 agcttgcgca tgatggcttc agtgctgtca gtatttaaat caacactaat gcccgccctg
     2521 gctgcaacct gaaacaaatc ctgtaacaca ggatcaaagg accttccggc tctgaaggcc
     2581 gcttttgcat ttgcaagccg ggaaaatgcc ccagacattt ccccttcatc aacattattt
     2641 gcccgcgcag cccgtaacca tccgtccaga tttctggcct tcatgccaaa agcatcggat
     2701 tccacggaca gacggttcag atcacgggca aaacctgtta ccaggttctt cagccccccc
     2761 agcgtcagac tgacacccgc aagagccaga atctcgctac ggatccctga aaaaaaacgg
     2821 gacgcccgtt tcccggcatc ttccattcga cgggccgttt tatcagcatc ttttccggtt
     2881 ttttccagtg attcactggt tttcttctgt ccctgactga atgtgtcagc gacaccttcc
     2941 atcaccgtcg tgagccggtt aagggcagca tgtactgcct gttccccggc agtaaagtcc
     3001 ctgtcatcaa tcccgaggga cagaacaagc tcatcaagta cctgcgccat ttctgttctc
     3061 ctgtatcacc tgttcgttat gggcatccac atgaattatt tccagcagat cccataagtc
     3121 ctgcacacca aggacagaat ccagttcagc ttttgaagcc ttaccggagg agataacggt
     3181 cgcaatggta cggggaacat taacgtaatc caccaccccg aacggtctgt cggggtcgag
     3241 ataacgcggg gggatatcta gctgacgacg gtagcgaaaa aatccacatg cagcttaaag
     3301 acctccgcac gcagattaag acgggtaatg atttcttcaa tatcctcttc aacaagcggt
     3361 ctccggatgc tgcgtttttt cggatcggga acaaactgca cacagtcca
//
LOCUS       DADMJE010000249         3383 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.254, whole genome shotgun sequence.
ACCESSION   DADMJE010000249 DADMJE010000000
VERSION     DADMJE010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3383)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3383)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3383
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.254"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(34..2707)
                     /locus_tag="JN001_004004"
                     /pseudo
     CDS             complement(34..2707)
                     /locus_tag="JN001_004004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001368649.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="autotransporter outer membrane beta-barrel
                     domain-containing protein"
BASE COUNT          843 a          793 c          782 g          965 t
ORIGIN      
        1 gctgcttaaa aaaagaacaa atggtagtgt ccgctattgc cagtacacct cattcacata
       61 gacattcagc tggctgttgc ctgcggtgat gtcatacccc agtatcatgc tggcacgccc
      121 cagcagcgat tcgtagtgat tcagatgtat attgaggcca ttactcgcct tcatagccat
      181 ctcattctgg tggctgtatg taagctgggt ttgcggctct atatagaacc cataaccagt
      241 aggggacagg ttgaacctct gcccggcttc tagggagatg ctcattccat tcgcagtgcc
      301 gttggcgtta acgccgttgt tatgactgtc cagtacgtgg aaactatttt tctggcgcga
      361 tgcttttata acgagatcgc tgtaaaaacc gttttgtgcc atgtaactgg cgtacattcc
      421 catgtagtct gaacgtgcgg taccgtcgcc tccgctatag tccggcgatg catgtgttga
      481 gccaatatac agaccgacat acaacggcat ttcatcagag agacgtttat ccccaccaaa
      541 ctggataccg ctgtaaccca tgtcaaagcc gctcagtttg ccactggcaa aggagtccag
      601 gcttccccca taactgcgca accagatatt accgtcttta ctctgatttc gcaggtcacc
      661 catccgttgc atcagcgtac ggttttcaac atagttcaat aagtaaccga cattgagata
      721 attgccgcca gcatctgcgg tcgtggtggg tttaggcgtg ggagcgggtt caggcgtagg
      781 atcggggttg actatgggag gctgagcggg agctggtgtg ggttcaggat taggagtcgg
      841 ttccggaact gtcccggaag cgtaaagctc ccagttagtg ccatttttac gcacatcgta
      901 cagatatccc ccccaactca acctgagaag acgcgctgaa cgaggccgcg ccgtcagtgg
      961 tttttaccac tgtcagaact tcatttcccg ttgtggcctc gctgccctgg ttgcggatag
     1021 ccaatacgtg attaccagca ctactcccgc tgatattcaa taaatcccct ttattattaa
     1081 cgccattacc ctcgccaaca acatcagcac gcataataaa ggtactgtta ccgctcaggt
     1141 tctctacgtt taatgtggca aatgtgccgg cagttgaccc gtggctggca aaatcgacag
     1201 ttgaatggct cagcgccagc gtgtcgagat tagaattact tgttacgttc cagacgctgt
     1261 tattcattgc aacgtccagt tttccgccat tgacattatc gctgagggag gaacctgtcc
     1321 aaaccgaccc agggtgcata tccagattga ttagcccacc tttggaaaaa acgctaccgt
     1381 tgataagcat acgacccgag gcgttgatgc ggctggcggc ataaccatcg tcatgttgcg
     1441 ttgcaatggc catctggtcg ggtgtactca tatcaatgac cagatcgctc gtgaggtcga
     1501 tctggctgtt ggtcatggca taaattcccc tggctcctgc cgcgccggtg atagccaaac
     1561 tgtctccggt tattctaccg ccgctgagcg cccacaaacc cagcgccaga ctgccattac
     1621 gatcaactgt aatatcggta ttttgcatgt tgacaacagc cgttgccgtc tgggccgagg
     1681 caccataaga accgccggaa aagatgctgt ttcgttgcgc tgccgtgcca gaaaaattga
     1741 ttgtcgcgtc tgaaccactg gtgacgaggc caccgccctg cgcggaagaa atatggctat
     1801 ctgcaccgat agtggttgta ccaccacgaa cttcgacgcc attggccgcg gctccagtta
     1861 catcaacagt gagtgcattc gcgctaacct ggccaaagct ccagaggccg tgtgcattat
     1921 cgccattggt tttaatggaa ctgtttgttc cgagatcgac aacagagttt ttctgtacgt
     1981 ttatccccat ggcgctgtag ccctgaacat cgattgtcag gtctgtagcc gtaaaacgcg
     2041 cagcaccatt ggcgttattg ccgttgagac caccgatata aacacctgta cttccatcgg
     2101 tcgtgatttt acttccgctt ccaagatcga cactggtgcc atagtcattg atggttaggc
     2161 ctataccgtt cgagttttca atggtgaatt gagtggctgt tagtgttgag ctatgcccaa
     2221 taatgatgcc gtcatcgtta ctcttaatgg tgctgcctgt gcctaagtca gcatgggtat
     2281 agtcaccaat taagttaatg ccgatggcag aggtttgacc aacaacatct actgtgagtc
     2341 ggttagctgt cagggagctg tttttgccct gaataatgat tccttttgca tatccagagg
     2401 cgtcgttgac attgacggtg acatcattac ccaggttgat attgccaggc gtgtttcctg
     2461 ctggggtcat tacaccatag aggtttcctg atggatcggc ggtatctcct gtaattctgt
     2521 caccatcatt aatagtaata ttggtgccat attgacttcc tgtatcagca gctatcagca
     2581 ggggggaaaa gataattgca ttcaaaccaa tagcgccaaa ttttatcagt tgaattgagg
     2641 gcgaacggat ttttaattca gcgagacgat ctgctttggt attcccattg tgttgtttga
     2701 tgcccatacc actcctatat agtacccaga ctatgggtct atggattttg tcattttgtt
     2761 taaatcaatg aataatatcc tcttatcatc atgatatttg tatggtgcaa tcatgatgag
     2821 cttctcagag aataattctc tattaccggg caaaatcagg aacacaggaa ttaatatata
     2881 tttaacatcc cccttacaaa ggtgagttta tatcgagtta ttccctaagt tgtcgttact
     2941 tattccaatt cgttactata aatatggcaa aaatattaca acaaacagcg gttaaaaaat
     3001 ttggtgaaga ttttttgtaa taatcctaat tagttatggg aatttcgctt gatgtatctg
     3061 cataacaaaa acaatatgcg ccatttttgc attactaata agaaaaagca aaaaacatcg
     3121 atattcattt ttggtcaatg ggttttctgg cctatcgttg ttattgtgct actggttatc
     3181 attttcatct tgccagcata ttggagcgtg atcaattttg atcagctgtg aaggtggctg
     3241 atgtgtagtg atacaaaaac ttacgttata tcactgctaa tgagatatcc gtcatctgaa
     3301 cacttatgtc tttaattatt ctcgtggttc actataggca ataagcacaa aagtgtagga
     3361 tgttacaaga atgattagga ctc
//
LOCUS       DADMJE010000250         3319 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.255, whole genome shotgun sequence.
ACCESSION   DADMJE010000250 DADMJE010000000
VERSION     DADMJE010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3319)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3319)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3319
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.255"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..211)
                     /locus_tag="JN001_004005"
     CDS             complement(<1..211)
                     /locus_tag="JN001_004005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000589351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055042.1"
                     /translation="MIRFRLYIPPVILGFVIVPLLVWPTVIVLAVLIFTLTFLAEIIF
                     SFPLLVVCISLQELQLELMVEYALFF"
     gene            complement(214..981)
                     /locus_tag="JN001_004006"
     CDS             complement(214..981)
                     /locus_tag="JN001_004006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001182130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055043.1"
                     /translation="MQPSPAMQALIEQIYHTFRRYRVPQKFVVCCEYCLSQQEQKALR
                     STSLRAIPYSLINAWNSSPGPDPQNSDEVRYFLPRLLEFVAQGHFDNIHVVFSLRRIN
                     LANKENWRADERAILQRFACQYMTDWVSGDEAVELQYMLEMFFRADIALAPLLDAINS
                     VPGFWSTVSLACLLNRYCEDYIRDNQDDIDNVITTQINAWARNNHPLLKERARQAIEN
                     PLKQPEPMTEYQVWEDDWIIDECLCAMYDASSESLGK"
     gene            complement(984..1694)
                     /locus_tag="JN001_004007"
     CDS             complement(984..1694)
                     /locus_tag="JN001_004007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000424214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055044.1"
                     /translation="MELVNTLFASLAGTDPFTGVDITIANCKSAYWDEGIVQQLINQA
                     LDEGEKFVGADGLEGLLRYDVTLNIGLTSSKVWPGFSLDTATISRLCACGADFGFDPY
                     ISDVPDVQCDLNTTNDVTVQFTAMLNPDERVIIAKRPLKKCDSWIEDVYIFQVFKDAW
                     KFHNNNSLRGFRDKQAELKLYTRHYSVENCAEESCRDCNSCIRPSFSLSRSALIRLNA
                     ANARFVYQPFTRDQRARG"
     gene            complement(1710..3215)
                     /locus_tag="JN001_004008"
                     /pseudo
     CDS             complement(1710..3215)
                     /locus_tag="JN001_004008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001472437.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="PstS family phosphate ABC transporter
                     substrate-binding protein"
BASE COUNT          934 a          797 c          728 g          860 t
ORIGIN      
        1 tgaaaaaaag tgcatattca accattaact caagttgtaa ttcctgaaga gaaatacaca
       61 caaccaggag cggaaaggag aatattattt ctgccagaaa agttaacgtg aatataagta
      121 cggctaagac aataaccgtc ggccatacca ataatggcac gataacaaaa ccgagaatta
      181 cagggggaat ataaagccgg aatctaatca tttttatttt cctagtgatt cggatgatgc
      241 gtcatacatc gcgcataaac actcatcaat tatccagtca tcttcccaga cctgatattc
      301 tgtcattggt tcgggctgtt ttagcgggtt ctcaatcgct tgccgcgctc tttctttcag
      361 taaaggatga ttatttctag cccaggcatt gatttgggtg gtaatgacgt tatcgatatc
      421 gtcctggtta tctctgatat aatcctcaca atatctgttc aataaacagg caagagaaac
      481 ggtcgaccaa aagccgggaa ctgaattaat ggcatccagc aatggcgcaa gagcgatatc
      541 ggcacggaaa aacatttcca gcatatactg taattcgaca gcttcatcgc cggataccca
      601 atcagtcata tactggcagg caaatcgctg taaaattgcc cgttcatccg cacgccagtt
      661 ttctttgttg gcaaggttga tacggcgcag agaaaaaact acgtgaatat tgtcaaaatg
      721 cccctgtgca acaaattcca gtaaacgcgg cagaaaatag cggacctcat cgctattttg
      781 cggatcaggc cctgggctac tattccaggc attgattaag gaatacggga tcgctcgtaa
      841 cgatgtactc cgtaatgcct tttgttcctg ctgactcagg caatattcac aacaaaccac
      901 aaatttctgc ggcacccgat aacgacgaaa ggtgtgataa atctgctcaa ttaatgcctg
      961 catggcgggg ctgggttgca tagttacccc ctcgcccgct gatcgcgtgt aaacggttga
     1021 tagacaaaac gagcattcgc cgcgttcagg cgaataaggg cgctacgcga aagggaaaag
     1081 ctggggcgaa tgcaactatt gcagtctcga cagctttcct ctgcgcaatt ttccactgag
     1141 taatgacgcg tgtagagttt cagttcggcc tgcttatcgc gaaatccgcg taaactgtta
     1201 ttgttatgaa atttccaggc atctttaaag acctgaaaga tatagacatc ctcaatccag
     1261 gagtcacatt ttttaagcgg gcgctttgct attatcaccc gctcatccgg atttagcatc
     1321 gccgtaaatt gtacggtgac gtcatttgtc gtgttcaggt cacattgaac atctggtaca
     1381 tcactgatat aggggtcaaa tccaaaatca gcaccacagg cacaaagacg gctaatggtg
     1441 gcggtatcga gggaaaatcc cggccatact ttgctggagg ttaagccaat atttaatgtg
     1501 acatcatatc gaagcaatcc ctcaagaccg tcagcaccga cgaacttttc cccttcatcc
     1561 agggcctggt taataagttg ctgaacaatg ccttcatccc agtatgccga tttgcagttg
     1621 gcaatcgtaa tatccacgcc tgtgaaggga tcagtaccgg caaggcttgc aaataatgta
     1681 ttaactaatt ccatttttat tatccagctt taaggtagcg tcttatacat cgggacataa
     1741 cctacatctt ccaccaaact ctgtccctgc ggcgttaaaa accactccaa caatttttgt
     1801 gtctctgacg tcgtattttc ccgcgttacc ataaaggcat cgatgatata gggatatttg
     1861 ccgttgcgaa tgttttcggc agtcggtgca ataccgttaa tcgctagcag ttttatattt
     1921 ttatcggcgt tcatttgtgt tgcgtaataa cggaaggtgt aacctattgc gttgtttgta
     1981 ttacggtatt cggcaacgac tttaatcatt ccctccatca tacttgccac ttctgtttcc
     2041 tgcggcgaga tcatgcggac atttttcatg acctgggatt gcatcaccgt ctggctacca
     2101 gagtcttccg ggcgttgcta ggtctggatc tcctgatcgt taccgccaac agtacgccag
     2161 ttggtaattg caccactgaa gatgtcacgc acctgttgtt cagtcaggga attaaccgga
     2221 ttatccgcat tgacgatgaa aacaaacgct tcacgggcaa aaggcgtgta cagcaaagta
     2281 atgcccgatt cctcagcgcg ttttttctgc ccaccggaag gttgcgccac aaaaataata
     2341 tcagcatcac ctttaacaat cctgttatac gcatcggggg tacgagagct ctccagatat
     2401 tccctggtgt gaaaatcttc cggtataacg ctcaaagcat aaaatgcaga ggcataaatt
     2461 gggtacgccg ccgtagcacc atcgagtcgc ggccagtttt gcgtaaactg aatttgcggt
     2521 ttaccacgca gtggtgtcag ttgattattg agtttatcgg gtcgccaggc ccaggtatca
     2581 atattttcgc gcacaccgac gccgggattg agctgtttat ataaataacc ctgataacca
     2641 gcgacaaaac caagcatgag aaggataaac aggagggaat tacggcaacg tagcccggat
     2701 gtaccggtta aaggatgtct ggttggccgg ccgtacccca gcgaaaaact gatatgcgcg
     2761 ccaacgggta taatgactat ccaccagtac tcacctccga ctactgagac taacaaaacg
     2821 cccagccagg ggagcataag atcagccaac caacccgatc ccatctggtg aaattgataa
     2881 tctgccagat gcagcgcgat tatccagcca accaggatta ataaaccggg tactaaaaaa
     2941 agacattgtc gccagacggc tatttctctt ttttctggtg cactatcgcc tgcccatact
     3001 cgccccgaga aaaatagcat taatgcgccc agcgccagca taaaaatgtt gagcagaagg
     3061 taacttgttg gcgtgataag gatattacaa acttcaataa taccggcaag tccgacaccc
     3121 agcatagcaa caaccgccgc caaaaattgc gtcagtatgg ggatgccgaa aaaagtcatt
     3181 accagcgagg acaaaatcca ttttctgttt tgcattattc tttccattct ttttgaatgg
     3241 tgaaattata ctccccgagt ccccttgccc cttctggaca cttttccgaa atgatggcgg
     3301 aaaaaaacgg gaccctttg
//
LOCUS       DADMJE010000251         3235 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.256, whole genome shotgun sequence.
ACCESSION   DADMJE010000251 DADMJE010000000
VERSION     DADMJE010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3235)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3235)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3235
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.256"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            99..1115
                     /locus_tag="JN001_004009"
     CDS             99..1115
                     /locus_tag="JN001_004009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5-like element IS5 family transposase"
                     /protein_id="HAY9055045.1"
                     /translation="MFVIWSHGTGFIMSHQLTFADSEFSSKRRQTRKEIFLSRMEQIL
                     PWQNMVEVIEPFYPKAGNGRRPYPLETMLRIHCMQHWYNLSDGAMEDALYEIASMRLF
                     ARLSLDSALPDRTTIMNFRHLLEQHQLARQLFKTINRWLAEAGVMMTQGTLVDATIIE
                     APSSTKNKEQQRDPEMHQTKKGNQWHFGMKAHIGVDAKSGLTHSLVTTAANEHDLNQL
                     GNLLHGEEQFVSADAGYQGAPQREELAEVDVDWLIAERPGKVRTLKQHPRKSKTAINI
                     EYMKASIRAKVEHPFRIIKRQFGFVKARYKGLLKNDNQLAMLFTLANLFRADQMIRQW
                     ERSH"
     gene            complement(1445..1588)
                     /locus_tag="JN001_004010"
     CDS             complement(1445..1588)
                     /locus_tag="JN001_004010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055046.1"
                     /translation="MSLDPLACGHDNVKQSKIVALTVSLGDKKAQYSRWQPDNLTVDA
                     ETK"
     gene            complement(1931..2160)
                     /locus_tag="JN001_004011"
                     /pseudo
     CDS             complement(1931..2160)
                     /locus_tag="JN001_004011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001546148.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
     gene            2741..3186
                     /locus_tag="JN001_004012"
                     /pseudo
     CDS             2741..3186
                     /locus_tag="JN001_004012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001469741.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          860 a          816 c          827 g          732 t
ORIGIN      
        1 aaccgagaga gaacgaatga acgccctgag aatggtcatt ccgccacgat atccctggtc
       61 tctgatggaa ggtgcgaaca agtccctgat atgagatcat gtttgtcatc tggagccatg
      121 gaacagggtt catcatgagt catcaactta ccttcgccga cagtgaattc agcagtaagc
      181 gccgtcagac cagaaaagag attttcttgt cccgcatgga gcagattctg ccatggcaaa
      241 acatggtgga agtcatcgag ccgttttacc ccaaggctgg taatggccgg cgaccttatc
      301 cgctggaaac catgctacgc attcactgca tgcagcattg gtacaacctg agcgatggcg
      361 cgatggaaga tgctctgtac gaaatcgcct ccatgcgtct gtttgcccgg ttatccctgg
      421 atagcgcctt gcctgaccgc accaccatca tgaatttccg ccacctgctg gagcagcatc
      481 aactggcccg ccaattgttc aagaccatca atcgctggct ggccgaagca ggcgtcatga
      541 tgactcaagg caccttggtc gatgccacca tcattgaggc acccagctcg accaagaaca
      601 aagagcagca acgcgatccg gagatgcatc agaccaagaa aggcaatcag tggcactttg
      661 gcatgaaggc ccacattggt gtcgatgcca agagtggcct gacccacagc ctagtcacca
      721 ccgcggccaa cgagcatgac ctcaatcagc tgggtaatct gctgcatgga gaggagcaat
      781 ttgtctcagc cgatgccggc taccaagggg cgccacagcg cgaggagctg gccgaggtgg
      841 atgtggactg gctgatcgcc gagcgccccg gcaaggtaag aaccttgaaa cagcatccac
      901 gcaagagcaa aacggccatc aacatcgaat acatgaaagc cagcatccgg gccaaggtgg
      961 agcacccatt tcgcatcatc aagcgacagt tcggcttcgt gaaagccaga tacaaggggt
     1021 tgctgaaaaa cgataaccaa ctggcgatgt tattcacgct ggccaacctg tttcgggcgg
     1081 accaaatgat acgtcagtgg gagagatctc actaaaaact ggggataacg ccttaaatgg
     1141 cgaagaaacg gtctaaatag gctgattcaa ggcatttacg ggagaaaaaa tcggctcaaa
     1201 catgaagaaa tgaaatgact gagtcagccg agaagaattt ccccgcttat tcgcaccttc
     1261 cttagcttac gttatagctg ttttcctttg cagtatttct ttgcttttct gtataccttt
     1321 atacctgtta taccagatca aaaaacaagc aatccacata acaaaacgcg ttttgttact
     1381 gatgtcacaa attgagcata tttttgtagc tgatagtttg ttacaaacac cagaaccaag
     1441 atgcctattt cgtttcagca tcaactgtta aattatctgg ctgccaacga gaatactgag
     1501 cttttttgtc cccaagactg accgtcaacg ccacaatctt tgactgtttg acattgtcat
     1561 gcccgcaggc cagcggatct aaagacatta gactgcttgc atcagccagt tgcgtatctg
     1621 gctatgtccc ttaattggta agggttcgag gaactcaaca ttaacgcatt tttcagcgca
     1681 tcaccgacag tgtatatgaa cgattgcact ctgacgatgg ttgatttatt tggttgcgta
     1741 ggggctagct agtctggtac cggaggctgg atctgaagta ctgaccccag gaataacgcc
     1801 gggctgactc atattctgac ccattgtcag cccgcgtgtt tactgctcta gctcatttcc
     1861 tgttgtcagg cgttcaattc ccaactgcag gttatggccc ggtgcacaaa cacctgacgg
     1921 caggtatcac ttacccgaag aaggtaaagc cctcaagagg cagtaactca gccaacctct
     1981 cctccggcca ctccggcaga cgcgtcagga cgtccgtcag ccaagcatgt ggctccagac
     2041 tgcggttccc agaaggctca ttatctgtgc cgcgcggttc ccggccatca gtgaaccagc
     2101 gaacaaccag gcctttcgtc ccataacgac cggacggata gcacgctcgc agatattgtt
     2161 gtgtgtgcct tgaaatgcac gatctttccg tcggtgaaag tccgccccgg ctaactctcg
     2221 ctccgactgg aaggacaaga agcggtccag gaggtaacaa aagggctgaa tctctccctg
     2281 aaacgacttc ttcaggaagt caacgggtta tgcgggccgt aacgtgagtg aacactgagc
     2341 agccatcgaa atgccgtcga gggtgctgac actccacaat aacggggaag gccgacgatg
     2401 accgggaaaa gagtgagaaa ggcatcggtc atacccaccg gggttgtggt gtcagcatgc
     2461 ataacaattg atcgatcgtg caacaagaga aatccataac gatgtctgtc cgggtgacgg
     2521 gcaacaacgc ctcgcgaggg ggtgaatcgg ttgttatgga tggcagatgg ggtgtagtag
     2581 tgaaaatact gagtaatgtc agaggagcga aggccccctc ttgcagtacc agtgtaacat
     2641 gcaggaagag cccggggatt gccatcagcc tcacaacccc gctcgaaccg gttcagaacc
     2701 tacagaaaac actacaggag aaagcaaagt gaaccgcccc gtgtttcctg tttatcattt
     2761 tctggtcagt gccgcgattc tggtattcgt ggtgattttc tggcggacac accatcgcga
     2821 ccaccgtaac tggctggctc tacggctatt cgtattatgc tctgtaaacc gttggccatt
     2881 gcggatggtt aaaggaacag ttgtggggac aactgacaca ttacgtgaaa tgcagcgtta
     2941 tgaacaactg agtcagcacg gggctgacaa ctggaaaatc cagccgggag caccgttata
     3001 tgatacgatt gttattgtca ctggtgagag tgtgcgcagg gattatatgt cagtgacata
     3061 acgtctcatc agcccgtcag tagaaaaatc agtgcccgtc atttcgcagg tatttttcag
     3121 tggatgaccg gtatttgtac tgaaaatata ccgccattca atccgctgac agacgaagat
     3181 aattaaactg ttatggtttt taagggagag aggaatatac cggcagacag tttga
//
LOCUS       DADMJE010000252         3223 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.257, whole genome shotgun sequence.
ACCESSION   DADMJE010000252 DADMJE010000000
VERSION     DADMJE010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.257"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..907
                     /locus_tag="JN001_004013"
     CDS             <1..907
                     /locus_tag="JN001_004013"
                     /EC_number="2.7.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pseudouridine kinase"
                     /protein_id="HAY9055047.1"
                     /translation="ANIDVAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNK
                     AWLLSAVGSDFYGQSLLTQTNQSGVYVDKCLIVPGENTSSYLSLLDNTGEMLVAINDM
                     NISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAANVPVFVDPVSAWKCV
                     KVRDRLNQIHTLKPNRLEAETLSGIALSGREDVAKVAAWFHQHGLNRLVLSMGGDGVY
                     YSDISGENSWSAPIKTNVINVTGAGDAMMAGLASCWVDGMPFAESVRFAQGCSSMALS
                     CEYTNNPDLSIANVISLVENAERLN"
     gene            874..1833
                     /locus_tag="JN001_004014"
     CDS             874..1833
                     /locus_tag="JN001_004014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HAY9055048.1"
                     /translation="MVSGERRTSELKISPELLQISPEVQDALKNKKPVVALESTIISH
                     GMPFPQNAQTAIEVEETIRKQGAVPATIAIIGGVMKVGLSKEEFELLGREGHNVTKVS
                     RRDLPFVVAAGKNGATTVASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQEL
                     ANTNVTVVCAGAKSILDLGLTTEYLETFGVPLIGYQTKALPAFFCRTSSFDVSIRLDS
                     ASEIARAMAVKWQSGLNGGLVVANPIPEQFAMPEESINAAIDQAVAEAEEQGVIGKES
                     TLFLLARVAELTGGDSLKSNIQLVFNNAILASEIAKEYQRLAG"
     gene            1927..3176
                     /locus_tag="JN001_004015"
                     /pseudo
     CDS             1927..3176
                     /locus_tag="JN001_004015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416669.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="NupC/NupG family nucleoside CNT transporter"
BASE COUNT          770 a          724 c          872 g          857 t
ORIGIN      
        1 ggcgaatatt gatgtcgccg gatattcaca tgaatcatta aattatgcgg attcaaatcc
       61 aggtaaaata aaatttacgc ctggtggagt cgggcgcaat attgcacaaa acctggcgtt
      121 gctggggaac aaagcctggc tactgagcgc cgtaggcagt gacttttatg gtcaatcgct
      181 gctaacgcaa accaatcaat ctggcgttta tgtcgataaa tgcctgattg tgccgggaga
      241 aaatacgtct agttatttat cattactcga taataccggt gaaatgctgg ttgctataaa
      301 tgacatgaat attagcaacg ctattacagc tgaatatctc gcacagcacc gtgaatttat
      361 tcagagggca aaggtcattg tcgcggactg taatatcagt gaagaggcac tggcatggat
      421 tctggataat gccgccaacg tacccgtatt tgtcgatccg gtttccgcat ggaaatgtgt
      481 caaagtgcgc gaccgtctaa atcagatcca cactctgaag ccaaaccgcc ttgaagcgga
      541 aaccctgagt gggattgcgc tgtcagggcg tgaagatgtg gcaaaagttg ctgcctggtt
      601 ccatcaacat ggcctgaacc gactggtatt gagcatgggc ggcgacggcg tttattacag
      661 cgatatcagc ggtgaaaata gctggtctgc gccgatcaaa accaatgtta ttaatgttac
      721 cggagcgggc gatgccatga tggcgggact tgcttcgtgt tgggtagacg gaatgccgtt
      781 tgccgaatct gttcgtttcg cacagggatg ttcgtcaatg gcgctctcct gtgaatacac
      841 caataacccc gatttatcga ttgccaacgt tatatcgtta gtggagaacg cagaacgtct
      901 gaattaaaaa tttcccctga attattacaa atttccccgg aagtgcagga cgctttaaaa
      961 aacaaaaaac cggttgtggc gctggaatcg accattattt ctcacgggat gccgttccca
     1021 caaaatgccc agaccgcaat tgaagtagaa gaaactattc gtaaacaggg cgctgtacct
     1081 gccactatcg ccattattgg cggcgtgatg aaagtgggtt taagcaaaga agaatttgaa
     1141 ttactgggtc gtgaagggca taacgtgacc aaagttagtc gtcgcgattt accttttgtt
     1201 gttgccgccg gaaaaaatgg cgcaaccact gtggcttcaa cgatgattat tgcggcgctt
     1261 gccggaatta aagtatttgc caccggggga attggtggtg tgcatcgcgg ggcggaacat
     1321 accttcgata tttctgccga tttgcaagaa ctggcaaata ctaatgtcac cgttgtttgt
     1381 gccggggcga aatctattct cgatttagga ttaaccactg agtatttaga aaccttcggt
     1441 gtgccgttaa ttggctatca gactaaagcg ctgcctgcgt ttttctgccg taccagctcg
     1501 tttgacgtca gtattcgtct cgacagcgcc agtgaaattg cccgtgcaat ggcggtgaaa
     1561 tggcaaagcg ggctgaacgg tggcctcgtg gtagcgaacc cgatcccgga acagtttgcg
     1621 atgccggagg aatctatcaa tgcagccata gatcaagccg tcgccgaagc cgaagagcag
     1681 ggcgttattg gtaaagaaag tacactgttc ctgctggcgc gcgttgctga gctgaccggc
     1741 ggtgacagcc tgaaatccaa tatccagctg gtattcaaca acgccattct ggcgagtgaa
     1801 attgccaaag aataccagcg tctcgcgggt taatttccga cgggcagaaa gccgtcgccc
     1861 gtactcatca agcataccaa aacctggcgc tgacgccggg tttactggca tgaagggaaa
     1921 atcattatgg atataatgag aagtgttgtg gggatggtgg tgttactggc aatagcattt
     1981 ctgttgtcag tgaataaaaa gagcatcagt ttgcgcacgg ttggagccgc actgctgctg
     2041 caaatcgcta ttggtggcat catgctctac ttcccaccgg gaaagtgggc agtagaacag
     2101 gcggcattag gcgttcataa agtgatgtct tacagtgatg ccggtaggcc ttcatttttg
     2161 gttcgctggt tgggccgaaa atggatgtcc tgtttgacgg tgcgggtttt atcttcgcct
     2221 ttcgcgtact tccggcgatt attttcgtta ctgcgctcat cagtctgctg tactacattg
     2281 gcgtgatggg gctgctgatt cgcatccttg gcagcatttt ccagaaagct cttaacatca
     2341 gcaaaatcga atcttttgtc gcagtcacaa ctattttcct cgggcaaaat gagatcccgg
     2401 cgatcgttaa accgtttatc gatcgcatga atcgcaacga gttgtttacc gcaatttgta
     2461 gcgggatggc gtccattgct ggttcgatga tgattggtta tgccggaatg ggcgtaccaa
     2521 ttgactacct gttagcggca tcgctgatgg cgatcccagg tggtattttg tttgcacgta
     2581 ttcttagccc ggccaccgag ccttcgcagg tcacatttga aaatctgtcg ttcagcgaaa
     2641 cgccgccaaa aagctttatc gaagcggcgg cgagcggtgc gatgaccggg ctgaaaatcg
     2701 ccgctggtgt agcgacggtg gtaatggcat ttgtcgcaat tattgcgctg atcaacggca
     2761 ttatcggcgg aattggtggc tggtttggtt tcgccaatgc ctctctggaa agtatttttg
     2821 gctatgtgct ggcaccgctg gcgtggatca tgggtgtgga ctggagtgat gccaatcttg
     2881 cgggtagcct gattgggcag aaactggcga ttaacgaatt cgtcgcttac ctgagtttct
     2941 ccccatacct gcaaacgggc ggcacgctgg aagtgaaaac cattgcgatt atctcctttg
     3001 cgctttgtgg ttttgctaac tttggttcta tcggtgttgt cgttggcgca ttttcggcta
     3061 tttcgccaaa acgcgcgccg gaaatcgccc agcttggttt acgggcgctg gcagcagcaa
     3121 cgctttccaa cctgatgagt gcgactattg ccgggttctt tattggttta gcttgagttt
     3181 cattgccgga tgtacgcgct tattaagcgt tgcatccggc aat
//
LOCUS       DADMJE010000253         3195 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.258, whole genome shotgun sequence.
ACCESSION   DADMJE010000253 DADMJE010000000
VERSION     DADMJE010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3195
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.258"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            199..939
                     /locus_tag="JN001_004016"
     CDS             199..939
                     /locus_tag="JN001_004016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="murein L,D-transpeptidase"
                     /protein_id="HAY9055049.1"
                     /translation="MRKIALILAMLLIPCVSFAGLLGSSSSTTPVSKEYKQQLMGSPV
                     YIQIFKEERTLDLYVKMGEQYQLLDSYKICKYSGGLGPKQRQGDFKSPEGFYSVQRNQ
                     LKPDSRYYKAINIGFPNAYDRAHGYEGKYLMIHGDCVSIGCYAMTNQGIDEIFQFVTG
                     ALVFGQPSVQVSIYPFRMTDANMKRHKYSNFKDFWEQLKPGYDYFEQTRKPPTVSVVN
                     GRYVVSKPLSHEVVQPQLASNYTLPEAK"
     gene            complement(910..1677)
                     /locus_tag="JN001_004017"
     CDS             complement(910..1677)
                     /locus_tag="JN001_004017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II glutamine amidotransferase"
                     /protein_id="HAY9055050.1"
                     /translation="MCELLGMSANVPTDICFSFTGLVQRGGGTGPHKDGWGITFYEGK
                     GCRTFKDPQPSFNSPIAKLVQDYPIKSCSVVAHIRQANRGEVALENTHPFTRELWGRN
                     WTYAHNGQLTGYKSLETGNFRPVGETDSEKAFCWLLHKLTQRYPRTPGNMAAVFKYIA
                     SLADELRQKGVFNMLLSDGRYVMAYCSTNLHWITRRAPFGVATLLDQDVEIDFSSQTT
                     PNDVVTVIATQPLTGNETWQKIMPGEWRLFCLGERVV"
     gene            complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JN001_004018"
     CDS             complement(1883..2461)
                     /gene="lpcA"
                     /locus_tag="JN001_004018"
                     /EC_number="5.3.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017458774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-sedoheptulose 7-phosphate isomerase"
                     /protein_id="HAY9055051.1"
                     /translation="MYQDLIRNELNEAAETLANFLKDDANIHAIQRAAVLLADSFKAG
                     GKVLSCGNGGSHCDAMHFAEELTGRYRENRPGYPAIAISDVSHISCVGNDFGFNDIFS
                     RYVEAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEI
                     RVPHFGYADRIQEIHIKVIHILIQLIEKEMVK"
     gene            2701..>3195
                     /locus_tag="JN001_004019"
     CDS             2701..>3195
                     /locus_tag="JN001_004019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414756.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HAY9055052.1"
                     /translation="MMILSILATVVLLGALFYHRVSLFISSLILLAWTAALGVAGLWS
                     AWVLVPLAIILVPFNFAPMRKSMISAPVFRGFRKVMPPMSRTEKEAIDAGTTWWEGDL
                     FQGKPDWKKLHNYPQPRLTAEEQAFLDGPVEEACRMANDFQITHELADLPPELWAYLK
                     EHRFF"
BASE COUNT          765 a          810 c          819 g          801 t
ORIGIN      
        1 atcttaggaa ataaatgata catgcgcttt tcggactatt gaaaactgcc cctgtgctaa
       61 atttgtaaac cctgcgccga caggcttgcg taaaactctt ttggtgataa tgtgagcctt
      121 ccaaatccag actattccga tttgggatcc attttgccgt cctggcgtgt gtaaccgttt
      181 tatcaaggaa taagcagtat gcgtaaaatc gcattaattc ttgcgatgtt gttgatcccg
      241 tgcgtttcgt ttgccggttt gctgggcagc agtagctcga ccacgccagt gagcaaagag
      301 tataagcagc agttgatggg atcccctgtc tacatccaga tcttcaagga agaacgtacg
      361 ctcgatctct acgtcaaaat gggcgagcaa tatcagctgc tcgacagtta taaaatctgt
      421 aaatattccg gcggcttagg gccaaaacag cgtcagggcg atttcaaaag cccggaaggg
      481 ttttatagcg tccagcgtaa tcagttaaaa ccagacagcc gttactacaa agcgattaat
      541 attggtttcc ccaatgccta tgaccgtgcg catggttatg aagggaaata cctgatgatc
      601 cacggcgatt gtgtttccat cggctgctac gcaatgacca atcagggtat tgatgagatc
      661 ttccagttcg ttactggtgc gctggtgttt ggtcagccga gcgtgcaagt gagtatttac
      721 ccgttccgca tgaccgacgc caatatgaag cgccataaat attccaactt taaggacttc
      781 tgggagcaac tgaagccggg ttacgactac tttgagcaaa cccgtaagcc accgaccgtt
      841 tctgtggtca atggtcgtta cgtggtcagc aagccgttaa gccacgaagt tgtgcagcca
      901 caactggcat caaactacac gctccccgag gcaaaataag cgccattcgc ctggcataat
      961 cttttgccag gtttcattgc ccgtcagcgg ctgtgtcgca atcaccgtga ccacatcatt
     1021 cggtgtggtc tgcgagctga agtcgatttc tacatcctga tccagcagcg ttgccacgcc
     1081 aaacggtgcg cggcgggtga tccagtgcag attcgtcgag caatacgcca ttacatagcg
     1141 cccatccgaa agcagcatgt tgaaaacgcc cttctgccgc agttcgtccg ccagtgaagc
     1201 gatatattta aacactgctg ccatgttgcc cggcgtgcgc gggtaacgct gcgttaattt
     1261 atgcagcagc cagcagaagg ctttttcgct gtcggtttcg cctaccgggc ggaagttgcc
     1321 ggtttccagt gatttgtagc ccgtcagttg tccgttatgg gcataagtcc agttacgccc
     1381 ccataactcg cgggtaaatg ggtgagtatt ttccaacgcc acctcgcccc gattagcctg
     1441 gcgaatatga gccaccaccg aacaggattt tatcgggtag tcctggacaa gtttggcgat
     1501 gggggaatta aagctgggtt gtggatcttt aaatgtgcga cagcctttac cttcgtaaaa
     1561 ggtaatgccc cagccatctt tatgtggccc ggttccacca ccacgctgta caagtccggt
     1621 gaaactaaag cagatatcgg tagggacgtt ggcgctcatc ccgagcaatt cgcacatggg
     1681 taacctccac aacagcggga gcgcatggcc cccggcgaag attgatttaa gaattttcag
     1741 gtcggatgcg gcgtaaacga attattcggc ctacggttcg cgtacagatt tgtaggcatg
     1801 ataagacgcg tcagcatcgc atcaggcatc agcgcacaag tgccggatgc ggcgtaaacg
     1861 ccttatccgg cctacgccag acttacttaa ccatctcttt ttcaattaac tggatcagga
     1921 tatggatcac tttaatgtga atctcctgaa tgcggtcggc ataaccaaag tgcggtacgc
     1981 gaatttcgat atccgccgtg ccagccattt tgccgccgtc tttaccggtc agggtgatca
     2041 ctttcatccc cttctcacgc gccgctgcga tcgctttgat cacgtttgca gagttaccgg
     2101 aggtggagat ccccagcagt acatcgcctt cgcgacctac cgcttcaacg tagcgggaga
     2161 aaatatcatt gaaaccgaaa tcattaccga cgcaggaaat atgactaacg tcagaaatag
     2221 caatcgccgg gtagcccgga cggttttcac ggtagcgacc ggtcaactct tcggcaaagt
     2281 gcatagcgtc gcaatgggaa ccgccgttgc cgcaggaaag cactttgcca ccggctttaa
     2341 agctgtctgc taacaggacc gccgcgcgct gaatggcgtg aatattggcg tcatctttta
     2401 aaaagttagc cagcgtttcc gccgcttcgt tcagttcgtt acgaataaga tcttggtaca
     2461 tgaggatatc cttcagcata aatgtaatag acaaaatgca gtgtaccgga taccgccaaa
     2521 agcgagaagt acgggcaggt gctatgacca ggactttttg acctgaagtg cggataaaaa
     2581 cagcaacaat gtgagctttg ttgtaattat attgtaaata cattgctaaa tgtatttaca
     2641 tccactacaa ccatatcatc acaagtggtc agacctccta caagtaaggg gcttttcgtt
     2701 atgatgattt tgagtattct cgctacggtt gtcctgctcg gcgcgttgtt ctatcaccgc
     2761 gtgagcttat ttatcagcag tctgattttg ctcgcctgga cagccgccct cggcgttgct
     2821 ggtctgtggt cggcgtgggt actggtgcct ctggccatta tcctcgtgcc atttaacttt
     2881 gcgcctatgc gtaagtcgat gatttccgcg ccggtatttc gaggtttccg taaggtgatg
     2941 ccgccgatgt cgcgcactga gaaagaagcg attgatgcgg gcaccacctg gtgggagggc
     3001 gacttgttcc agggcaagcc ggactggaaa aagctgcata actatccgca gccgcgcctg
     3061 accgccgaag agcaagcgtt tctcgacggc ccggtagaag aagcctgccg gatggcgaat
     3121 gatttccaga ttactcatga gctggcggat ctgccgccgg agttgtgggc gtaccttaaa
     3181 gagcatcgct tcttc
//
LOCUS       DADMJE010000254         3172 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.259, whole genome shotgun sequence.
ACCESSION   DADMJE010000254 DADMJE010000000
VERSION     DADMJE010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3172
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.259"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            345..504
                     /locus_tag="JN001_004020"
                     /pseudo
     CDS             345..504
                     /locus_tag="JN001_004020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001066419.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(722..2812)
                     /gene="iha"
                     /locus_tag="JN001_004021"
     CDS             complement(722..2812)
                     /gene="iha"
                     /locus_tag="JN001_004021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional siderophore receptor/adhesin Iha"
                     /protein_id="HAY9055053.1"
                     /translation="MRITTLASVVIPCLGFSASSIAAAEDVMIVSASGYEKKLTNAAA
                     SVSVISQEELQSSQYHDLAEALRSVEGVDVESGTGKTGGLEISIRGMPASYTLILIDG
                     VRQGGSSDVTPNGFSAMNTGFMPPLAAIERIEVIRGPMSTLYGSDAMGGVVNIITRKN
                     ADKWLSSVNAGLNLQESNKWGNSSQFNFWSSGPLVDDSVSLQVRGSTQQRQGSSVTSL
                     SDTAATRIPYPTESQNYNLGARLDWKASEQDVLWFDMDTTRQRYDNRDGQLGSLTGGY
                     DRTLRYERNKISAGYDHTFTFGTWKSYLNWNETENKGRELVRSVLKRDKWGLAGQPRE
                     LKESNLILNSLLLTPLGESHLVTVGGEFQSSSMKDGVVLASTGETFRQKSWSVFAEDE
                     WHLTDALALTAGSRYEHHEQFGGHFSPRAYLVWDVADAWTLKGGVTTGYKAPRMGQLH
                     KGISGVSGQGKTNLLGNPDLKPEESVSYEAGVYYDNPAGLNANVTGFMTDFSNKIVSY
                     SINDNTNSYVNSGKARLHGVEFAGTLPLWSEDVTLSLNYTWTRSEQRDGDNKGAPLSY
                     TPEHMVNAKLNWQITEEVASWLGARYRGKTPRFTQNYSSLSAVQKKVYDEKGEYLKAW
                     TVVDAGLSWKMTDALTLNAAVNNLLNKDYSDVSLYSAGKSTLYAGDYFQTGSSTTGYV
                     IPERNYWMSLNYQF"
BASE COUNT          795 a          836 c          732 g          809 t
ORIGIN      
        1 gacctctcag taaatatcaa tacggttctg gcgagccgct tacgtgcagc agtcttatcc
       61 ggcagtttaa aggggaggac ggagaccaat gaggcactgg agcagattca gtgcagaggt
      121 gacctgcttt atcaaactta attgtgacaa aatggcgatt gagaaggtgc aattgactta
      181 tccggattcg gtcgtggcga ggtggtgccc ctgcattctg ctaaccgggt tatgagccag
      241 gagtcagcga tagacaaagg gacttatctg accgggcccc cggaaaaatg gcgggagaga
      301 atgatacctt cctgctgacg agaccggact ttgagatgac gagcgatagt gcggcagtga
      361 tgtacagcct gatcggtagc tgcaaaactt aacggaatcg agccggaaac gtggctacgc
      421 cacgtgatca gtgtaatcaa cacctggcct gccaaccgca tgaaagagtt gttgccctgg
      481 aacgtcactc tctctgtaaa ctaattttta ccccacgtcc ttcacggtgc gcttacactc
      541 tggacaagta tgtaaatgat aagttaaaaa taatccgtgc atttcctgtg acgatattag
      601 ttgttggtaa cgaaatctca ttagcggatc ggaaatgcac ttaacctaat acgttgccac
      661 tgttccgcca ggagttgcag tggcaacgta ttctaccgtc agtgatagcg ttttgttatt
      721 atcagaactg atagttcagc gacatccagt aatttcgctc aggtatcaca tatcctgttg
      781 ttgatgatcc cgtctggaag taatcaccgg catacagcgt actcttaccg gcactgtaca
      841 ggctcacgtc actgtaatcc ttgttgagca ggttattcac cgcagcattc agcgtcaggg
      901 catccgtcat cttccaggac agacctgcat ccaccaccgt ccaggctttc aggtattctc
      961 ctttctcatc atacactttc ttctgtacag cgctcagtga cgaataattc tgggtgaaac
     1021 gtggtgtttt cccgcgataa cgggcaccca gccatgatgc cacctcttcg gtgatctgcc
     1081 agttcagttt cgcattcacc atgtgttcag gggtataact cagcggcgca cctttgttat
     1141 caccatcacg ttgttcactt cgggtccagg tgtaattcag tgacagcgtg acatcctctg
     1201 accacagcgg caatgtgccg gcaaattcca caccgtgcaa ccgggccttt ccgctgttta
     1261 catagctatt ggtgttatca tttatggaat aagagacaat cttgttggag aagtcagtca
     1321 taaaacctgt gacattggca ttcagaccgg cggggttatc gtaatacacc ccagcctcat
     1381 aactgacgct ctcttccggc ttcaggtcgg ggttaccaag tagatttgtt tttccctgcc
     1441 cggacacacc actaatccct ttatgtagct gccccattct gggtgcctta tatcccgtgg
     1501 tcacaccgcc tttcagcgtc caggcatctg ccacatccca gaccagatat gcacgcggac
     1561 tgaagtgtcc cccgaattgc tcatgatgtt catagcggct gcccgcagtc agcgcaagtg
     1621 catccgtgag atgccactca tcctcagcaa ataccgacca gcttttctgc cggaaagttt
     1681 cacctgtgct ggcaaggaca actccgtctt tcatggacga gctctgaaac tcgcccccca
     1741 ccgtaaccag atgagattct cccagagggg taagcagtaa tgaattcagg ataaggttcg
     1801 attccttaag ctcccgcggc tgaccggcaa gcccccattt gtcgcgcttc agtacactgc
     1861 gtacgagctc acgaccttta ttttctgtct cgttccagtt cagatacgat ttccatgttc
     1921 cgaaggtgaa agtatgatca tagccagctg aaattttgtt ccgctcatag cgcagggtcc
     1981 ggtcatatcc ccccgtcaga ctccccagtt gcccatcccg gttatcataa cgctgccggg
     2041 tggtatccat atcaaaccag agcacatcct gctccgacgc cttccagtca agacgtgcac
     2101 caagattata attctgtgac tccgtgggat aaggaatacg cgtggctgct gtatcgctca
     2161 gtgatgtgac cgatgagccc tgacgctgtt gtgtgctacc gcgtacctgc aggctgacag
     2221 aatcatccac aagggggcca ctgctccaga aattaaactg gctgctgtta ccccatttgt
     2281 tgctttcctg cagattcagc cctgcattga cggaagagag ccatttgtct gcattctttc
     2341 tggtaatgat attcaccaca ccgcccatcg catcagagcc atacagtgtg gacatcggcc
     2401 ccctgataac ctcaatacgc tcaatggcgg ccagaggggg catgaacccg gtattcatgg
     2461 cagaaaaacc gttgggagtc acgtcactgc ttccgccctg acgaacacca tcaatcagta
     2521 tcagcgtgta actggctggc attcctcgga tgctgatttc cagcccaccg gttttacccg
     2581 taccactttc aacatccaca ccctctactg atctcagagc ctccgccaga tcgtggtact
     2641 ggctggactg caattcctcc tggctaatca cagaaacact ggcggctgcg ttagtcagct
     2701 ttttctcata gccggatgcc gagacaatca tcacatcctc tgcagcagct atgctgctgg
     2761 ctgaaaatcc gagacaggga atgactacgg aagccagagt ggttattcgc atattactaa
     2821 tctccgatca tgttaaccgg caagacaata cacaaataca aacaataatg agaataattt
     2881 atatttgcct tttacaaaaa ataaagatta ttaacaaaac taaatataaa taacaactgc
     2941 ctcggcatgc cagttaacag ctatccgtat ggcgtgttcg gttttgcgaa taaaaaatgg
     3001 ttactgtaga agcggatttc caccacatgt caaccatgaa tggtcagtgg tgcgagacga
     3061 ctgggatgat ttggtcgatg acttcttccg gtgaatactg atagaaacat tgaaatattg
     3121 taagagaaag cgttcaaaat tctgtggcac gtgaaaaatt ctacagcgtc at
//
LOCUS       DADMJE010000255         3146 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.260, whole genome shotgun sequence.
ACCESSION   DADMJE010000255 DADMJE010000000
VERSION     DADMJE010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3146)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3146)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3146
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.260"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            2..142
                     /locus_tag="JN001_004022"
     CDS             2..142
                     /locus_tag="JN001_004022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9055054.1"
                     /translation="MRPPSPLSLAWRKFGSGKAVEDIVTLFTQRRPEISGFLEIFGNP
                     RS"
     gene            211..1305
                     /gene="mnmH"
                     /locus_tag="JN001_004023"
     CDS             211..1305
                     /gene="mnmH"
                     /locus_tag="JN001_004023"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-selenouridine(34) synthase MnmH"
                     /protein_id="HAY9055055.1"
                     /translation="MQERHTEQDYRALLIADTPIIDVRAPIEFEQGAMPAAINLPLMN
                     NDERAAVGTCYKQQGSDAALALGHKLVAGEIRQQRIDAWRAACLQNPQGILCCARGGQ
                     RSHIVQSWLHAAGIDYPLVEGGYKALRQTAIQATIELAQKPIVLIGGCTGSGKTLLVQ
                     QQPNGVDLEGLARHRGSAFGRTLQPQLSQASFENLLAAEMLKTDARQDLRLWVLEDES
                     RMIGSNHLPECLRERMTQAAIAVVEDPFEIRLERLNEEYFLRMHHDFTHAYGDEQGWQ
                     EYCEYLHHGLSAIKRRLGLQRYNELAAQLDTALTTQLTTGSTDGHLAWLVPLLKEYYD
                     PMYRYQLEKKAEKVVFRGEWAEVAEWVKAR"
     gene            1421..1786
                     /locus_tag="JN001_004024"
                     /pseudo
     CDS             1421..1786
                     /locus_tag="JN001_004024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014543172.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
     gene            complement(2552..2798)
                     /locus_tag="JN001_004025"
                     /pseudo
     CDS             complement(2552..2798)
                     /locus_tag="JN001_004025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308588.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(2779..3146)
                     /locus_tag="JN001_004026"
                     /pseudo
     CDS             complement(2779..3146)
                     /locus_tag="JN001_004026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308587.2"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
BASE COUNT          842 a          725 c          713 g          866 t
ORIGIN      
        1 gatgcgccct ccttcgccat tgagtctggc atggcgcaaa tttggcagcg gcaaagcggt
       61 agaagatatt gtgaccttgt ttacccagcg caggccggaa atcagcggat ttttagaaat
      121 tttcggcaac ccacgcagtt aaaaatcaag tttccttgcg cgttggcgcg taaaatagcg
      181 cgcaagctga tttgaggttc acttttaact atgcaagaga gacacacgga acaggactat
      241 cgtgccctgc tgattgctga tacgcccatt attgatgttc gcgcccctat cgagtttgag
      301 caaggcgcaa tgcccgccgc tatcaatctg ccgttaatga ataacgatga acgcgccgcc
      361 gttggcacct gctataaaca gcaagggtca gacgcggcgc tggcgctggg gcataaactg
      421 gtggcgggtg aaattcgtca gcagcgcata gacgcctggc gggcagcgtg cctgcaaaat
      481 ccgcaaggta ttctctgctg tgcccgtggc ggtcaacgct cacatattgt gcaaagctgg
      541 ttgcatgcag cggggattga ttatccgctg gtggaaggcg gttataaggc actgcgccag
      601 accgcgattc aggcgactat tgaactggca caaaaaccga tagtgctgat tggcggttgt
      661 accggcagcg gtaaaacgct gttagtgcag caacagccga acggtgtcga tctggaaggg
      721 ctggcgcgtc atcgcggttc ggcgtttggt cgcacgttac aaccacaact tagccaggcg
      781 agttttgaaa atctgctggc tgccgaaatg ctaaaaaccg acgcccgtca ggatttgcgc
      841 ctgtgggtgc tggaagatga aagccggatg atcggttcga atcacctgcc ggaatgtctg
      901 cgcgagcgaa tgactcaggc ggcgattgcg gtggtagaag atccgtttga gatccgtctt
      961 gaacgcctga acgaagagta tttcttgcgt atgcatcatg attttaccca cgcgtacggc
     1021 gacgaacagg gctggcagga atattgcgaa tacctgcatc acggactttc ggctattaag
     1081 cgtcggctgg ggttacagcg ctataacgaa ctcgctgccc agctggatac ggcgctgaca
     1141 acgcaactca ccaccggcag caccgacggt catctggcct ggctggtgcc gttacttaaa
     1201 gaatattacg acccaatgta tcgctatcag cttgagaaaa aagcggaaaa agttgtcttt
     1261 cgcggtgagt gggcggaagt ggcggaatgg gttaaggcgc ggtaatgagg gacgtatttg
     1321 tattagtcgc gacttgatct gacacatggc cttgaaaggt tgagagttac cggttttgat
     1381 atgagtgtcg aatccttatc caaaacaaga ggtaactctc atgcttcata ctgccaatcc
     1441 cgtcatcaaa cacaaagccg gtttgctcaa tctggctgaa gaactcagca acgtatcaaa
     1501 agcctgtaaa atcatgggcg tttcgcgtga tacgttttat cgttaccgcg aactggtcgc
     1561 tgaaggcggt gtggatgcgc agattaatcg tagtcgccgc gctcctaacc ttaagaaccg
     1621 taccgatgag gcaactgaac aggctgttgt tgattacgcc gtcgctttcc cgacacatgg
     1681 tcagcaccgg gccagcaacg agctgcgtaa acaggggggt tttatctccg acagtggtgt
     1741 ccgttctgtc tggttactcc ataaccttga gaatctcaaa agacgatact gaacaaattt
     1801 tatcaggtga cgttccgtaa aaagttgtat ggagttctcg atgcagtcgg cgcgactatc
     1861 agtacccccg ctgaaccctg gactatcggg ccgccgtact ggggcatgtc accctggcgt
     1921 gccgctggtt ttccgctaat ggtttatttc ctctttcttt cccggcaaga atttatttta
     1981 atccggaagg attatttatt ttcagatagg gactcacatt aaacacgtaa cattttaatt
     2041 aatgcatggc tgaatatgta ttacacaatg tcagatatcg taaaagacca gtgcaattct
     2101 atgtaaactc tctgactgtt cattttattt gttgtttcag ggtcggaact caccctcaat
     2161 aaacaactga atacgagtag atattcatcg tctgagctat atggctttac acaatagccg
     2221 acatgtcttt tctcagtcag gaattttact tttcctcact acgaagttga cgacttcgat
     2281 atgggataga ctcttaattc aagcaattac tctgcacaag catcaggcaa tccagctcca
     2341 atatttgtta taaaataatg cgtaacatta atttcaccaa caaaaaaagg tttacaccat
     2401 ccccttgcct tggtatctta ccatatttac accacacttt ttttgtatct ggatcattct
     2461 ttgatacgat tttcgccact tgttccctgg ccctcactgt caatgttttc ttaaacctac
     2521 ccccatcatc atttgttagg gaaaaataag aaaaaaaata atcatcttct acatttgtgt
     2581 atattgatat atccaccgct acgtgcgaaa aaaaaatctg ggagccatgt aaaaactcca
     2641 tcattttctg gtattgccat atagtttatg taatgtttac ttacaagaga ttcatctttg
     2701 tataaataaa gataagtaat tacgcataaa acaacaatga ttataatagc aaaaataaat
     2761 attatcatct ttgatagatt acttgagata gccagcatct tgtaaagcct ttatcgtttt
     2821 tttatgctct ggattaatat aatcactaca tctatctgag caatctgttg ttgatggaca
     2881 tgtcaaccca tggtcattta cagccaagtc ttttttatta tcttcaatca tttcagaatg
     2941 ggatagcttt acttttctgc cgtacatacc gaacagattt aatccgtaat ctctaatctc
     3001 tttttcataa cccagccctt tcgccgatcg gctaacacca gcgtcattta atttagacac
     3061 tcgacaaaat gccatacaat ggaaaaattg atcagtccca cctaaattta atctcttcat
     3121 aagtatcaga taatatatcc catgct
//
LOCUS       DADMJE010000256         3144 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.261, whole genome shotgun sequence.
ACCESSION   DADMJE010000256 DADMJE010000000
VERSION     DADMJE010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3144
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.261"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            71..3001
                     /locus_tag="JN001_004027"
     rRNA            71..3001
                     /locus_tag="JN001_004027"
                     /product="23S ribosomal RNA"
     gene            3079..>3144
                     /gene="rrf"
                     /locus_tag="JN001_004028"
     rRNA            3079..>3144
                     /gene="rrf"
                     /locus_tag="JN001_004028"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          837 a          689 c          973 g          645 t
ORIGIN      
        1 gaacaacgaa agttgttcgt gagtctctca aattttcgca acacgatgat gaatcgtaag
       61 aaacatcttc gggttgtgag gttaagcgac taagcgtaca cggtggatgc cctggcagtc
      121 agaggcgatg aaggacgtgc taatctgcga taagcgtcgg taaggtgata tgaaccatta
      181 taaccggcga tttccgaatg gggaaaccca gtgtgattcg tcacactatc attaactgaa
      241 tccataggtt aatgaggcga accgggggaa ctgaaacatc taagtacccc gaggaaaaga
      301 aatcaaccga gattccccca gtagcggcga gcgaacgggg agcagcccag agcctgaatc
      361 agtgtgtgtg ttagtggaag cgtctggaaa ggcgtgcgat acagggtgac agccccgtac
      421 acaaaaatgc acatattgtg agctcgatga gtagggcggg acacgtggta tcctgtctga
      481 atatgggggg accatcctcc aaggctaaat actcctgact gaccgatagt gaaccagtac
      541 cgtgagggaa aggcgaaaag aaccccggcg aggggagtga aaaagaacct gaaaccgtgt
      601 acgtacaagc agtgggagca cgcttaggcg tgtgactgcg taccttttgt ataatgggtc
      661 agcgacttat attctgtagc aaggttaacc gaatagggga gccgaaggga aaccgagtct
      721 taactgggcg ttaagttgca gggtatagac ccgaaacccg gtgatctagc catgggcagg
      781 ttgaaggttg ggtaacacta actggaggac cgaaccgact aatgttgaaa aattagcgga
      841 tgacttgtgg ctgggggtga aaggccaatc aaaccgggag atagctggtt ctccccgaaa
      901 gctatttagg tagcgcctcg tgaattcatc tccgggggta gagcactgtt tcggcaaggg
      961 ggtcatcccg acttaccaac ccgatgcaaa ctgcgaatac cggagaatgt tatcacggga
     1021 gacacacggc gggtgctaac gtccgtcgtg aagagggaaa caacccagac cgccagctaa
     1081 ggtcccaaag tcatggttaa gtgggaaacg atgtgggaag gcccagacag ccaggatgtt
     1141 ggcttagaag cagccatcat ttaaagaaag cgtaatagct cactggtcga gtcggcctgc
     1201 gcggaagatg taacggggct aaaccatgca ccgaagctgc ggcagcgacg ctgatgcgtt
     1261 gttgggtagg ggagcgttct gtaagcctgt gaaggtgtgc tgtgaggtat gctggaggta
     1321 tcagaagtgc gaatgctgac ataagtaacg ataaagcggg tgaaaagccc gctcgccgga
     1381 agaccaaggg ttcctgtcca acgttaatcg gggcagggtg agtcgacccc taaggcgagg
     1441 ccgaaaggcg tagtcgatgg gaaacaggtt aatattcctg tacttggtgt tactgcgaag
     1501 gggggacgga gaaggctatg ttggccgggc gacggttgtc ccggtttaag cgtgtaggct
     1561 ggttttccag gcaaatccgg aaaactaagg ctgaggcgtg atgacgaggc actacggtgc
     1621 tgaagcaaca aatgccctgc ttccaggaaa agcctctaag catcaggtaa catcaaatcg
     1681 taccccaaac cgacacaggt ggtcaggtag agaataccaa ggcgcttgag agaactcggg
     1741 tgaaggaact aggcaaaatg gtgccgtaac ttcgggagaa ggcacgctga tatgtaggtg
     1801 aagtccctcg cggatggagc tgaaatcagt cgaagatacc agctggctgc aactgtttat
     1861 taaaaacaca gcactgtgca aacacgaaag tggacgtata cggtgtgacg cctgcccggt
     1921 gccggaaggt taattgatgg ggtcagcgca agcgaagctc ttgatcgaag ccccggtaaa
     1981 cggcggccgt aactataacg gtcctaaggt agcgaaattc cttgtcgggt aagttccgac
     2041 ctgcacgaat ggcgtaatga tggccaggct gtctccaccc gagactcagt gaaattgaac
     2101 tcgctgtgaa gatgcagtgt acccgcggca agacggaaag accccgtgaa cctttactat
     2161 agcttgacac tgaacattga gccttgatgt gtaggatagg tgggaggctt tgaagtgtgg
     2221 acgccagtct gcatggagcc gaccttgaaa taccaccctt taatgtttga tgttctaacg
     2281 ttgacccgta atccgggttg cggacagtgt ctggtgggta gtttgactgg ggcggtctcc
     2341 tcctaaagag taacggagga gcacgaaggt tggctaatcc tggtcggaca tcaggaggtt
     2401 agtgcaatgg cataagccag cttgactgcg agcgtgacgg cgcgagcagg tgcgaaagca
     2461 ggtcatagtg atccggtggt tctgaatgga agggccatcg ctcaacggat aaaaggtact
     2521 ccggggataa caggctgata ccgcccaaga gttcatatcg acggcggtgt ttggcacctc
     2581 gatgtcggct catcacatcc tggggctgaa gtaggtccca agggtatggc tgttcgccat
     2641 ttaaagtggt acgcgagctg ggtttagaac gtcgtgagac agttcggtcc ctatctgccg
     2701 tgggcgctgg agaactgagg ggggctgctc ctagtacgag aggaccggag tggacgcatc
     2761 actggtgttc gggttgtcat gccaatggca ctgcccggta gctaaatgcg gaagagataa
     2821 gtgctgaaag catctaagca cgaaacttgc cccgagatga gttctccctg actccttgag
     2881 agtcctgaag gaacgttgaa gacgacgacg ttgataggcc gggtgtgtaa gcgcagcgat
     2941 gcgttgagct aaccggtact aatgaaccgt gaggcttaac cttacaacgc cgaaggtgtt
     3001 ttggcggatg agagaaagat tttcagcctg atacagatta aatcagaacg cagaagcggt
     3061 ctgataaaac agaatttgcc tggcggccgt agcgcggtgg tcccacctga ccccatgccg
     3121 aactcagaag tgaaacgccg tagc
//
LOCUS       DADMJE010000257         3097 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.262, whole genome shotgun sequence.
ACCESSION   DADMJE010000257 DADMJE010000000
VERSION     DADMJE010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3097)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3097)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.262"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..923)
                     /gene="curA"
                     /locus_tag="JN001_004029"
     CDS             complement(<1..923)
                     /gene="curA"
                     /locus_tag="JN001_004029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415966.6"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent curcumin/dihydrocurcumin
                     reductase"
                     /protein_id="HAY9055056.1"
                     /translation="MGQQKQRNRRWVLASRPHGAPVPENFRLEEDDVATPGEGQVLLR
                     TVYLSLDPYMRGRMSDEPSYSPPVDIGGVMVGGTVSHVVESNHPDYQPGDWVLGYSGW
                     QDYDISSGDDLVKLGDHPQNPSWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATG
                     PVGATVGQIGKLKGCRVVGGAGGAEKCRHAIEVLGFDVCLDHHAGDFAEQLVKACPKG
                     IDIYYENVGGKVFDAVLPLLNTSARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKR
                     IRLQGFIIAQDYGHRIHEFQKEMGQWVKEDK"
     gene            1104..1622
                     /gene="mddA"
                     /locus_tag="JN001_004030"
     CDS             1104..1622
                     /gene="mddA"
                     /locus_tag="JN001_004030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-methionine sulfoximine/L-methionine sulfone
                     acetyltransferase"
                     /protein_id="HAY9055057.1"
                     /translation="MSIRFARKADCAAIAEIYNHAVLYTAAIWNDQTVDADNRIAWFE
                     ARTIAGYPVLVSEEDGVVTGYASFGDWRSFDGFRHTVEHSVYVHPDHQGKGLGRKLLS
                     RLIDEARDSGKHVMVAGIESQNQASLHLHHSLGFVVTAQMPQVGTKFGRWLDLTFMQL
                     QLDERTEPDAIG"
     gene            1619..2068
                     /locus_tag="JN001_004031"
     CDS             1619..2068
                     /locus_tag="JN001_004031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HAY9055058.1"
                     /translation="MNQSLTLAFLIAAGIGLVVQNTLMVRITQTSSTILIAMLLNSLV
                     GIVLFVSILWFKQGMAGFGELVSSVRWWTLIPGLLGSFFVFASISGYQNVGAATTIAV
                     LVASQLIGGLMLDIFRSHGVPLRALFGPICGAILLVVGAWLVARRSF"
     gene            complement(2069..2302)
                     /locus_tag="JN001_004032"
     CDS             complement(2069..2302)
                     /locus_tag="JN001_004032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcY family protein"
                     /protein_id="HAY9055059.1"
                     /translation="MSHLDEVIARVDAAIEESVIAHMNELLIALSDDAELSREDRYTQ
                     QQRLRTAIAHHGRKHKEDMEARHEQLTKGGTIL"
     gene            complement(2388..2561)
                     /locus_tag="JN001_004033"
     CDS             complement(2388..2561)
                     /locus_tag="JN001_004033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415962.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GhoT/OrtT family toxin"
                     /protein_id="HAY9055060.1"
                     /translation="MSLYQHMLVFYAVMAAIAFLITWFLSHDKKRIRFLSAFLVGATW
                     PMSFPVALLFSLF"
     gene            2756..2851
                     /gene="yncL"
                     /locus_tag="JN001_004034"
     CDS             2756..2851
                     /gene="yncL"
                     /locus_tag="JN001_004034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001165318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stress response membrane protein YncL"
                     /protein_id="HAY9055061.1"
                     /translation="MNVSSRTVVLINVFAAVGLFTLISMRFGWFI"
BASE COUNT          752 a          792 c          723 g          830 t
ORIGIN      
        1 attttatcct ctttcaccca ttgccccatc tccttctgaa actcatggat gcggtgacca
       61 taatcctgag cgataataaa cccttgcaag cgaatacgtt ttttcagcac cgttgccatc
      121 aacaggggta aacgatccgg accgggtggt agctctgtag cgttatagct gctcactaag
      181 ccacaaacgg gaatgcgcgc agatgtatta agtaatggta gcactgcatc aaatacctta
      241 ccgcccacgt tttcataata gatatcaata ccttttgggc acgctttcac cagttgttcg
      301 gcaaaatcac ccgcgtggtg atcaagacaa acatcgaagc ccagcacctc gatagcatgg
      361 cggcattttt ccgcgccacc ggcccccccc accaccctgc aacctttaag tttgccgatt
      421 tgccccaccg ttgctcccac aggacctgtc gccgcagcta ccaccaacgt ttcgccctct
      481 ttaggctgac cgatatccag cagccccata taagcggtaa agcctggcat ccccagcaca
      541 cccagcgacc acgatggatt ttgcggatga tcgccaagtt tcaccagatc atcaccactg
      601 gatatgtcat agtcctgcca tccactgtag cccagcaccc agtcgccagg ctgataatca
      661 ggatgattcg actccacaac atggctcacc gtgccgccga ccatcacgcc gccaatatca
      721 acaggcggtg aataagatgg ctcatcgctc atacgtccac gcatatacgg gtccagggac
      781 aaataaactg tgcgcagtaa cacctgtcct tcacccggtg tggcgacatc atcttcttca
      841 agacggaaat tctccggaac cggtgcgcca tgtggacgcg aggccagaac ccaacgtcga
      901 ttacgctgct tttgttgccc cataatgctc tcctgtgctt ttggcatgaa tccatcaata
      961 gtagcaggct cacgggattg gttttgtttg cagccgtcac atcccctctg caacacgcaa
     1021 taatttcatc gaggaatccg ttgcttcggg ctgttttcga tagtattgat aacatcatca
     1081 tcattatttt atcgaggcca gacatgtcca tccgttttgc ccgcaaagcc gattgtgctg
     1141 ccattgcgga aatttataac cacgccgtgt tgtatacggc ggctatctgg aatgaccaaa
     1201 cggttgatgc agataaccgc attgcctggt ttgaagcgcg gaccatagca ggttatccgg
     1261 tgctggtaag tgaagaagat ggcgtagtga cgggatatgc ctcgtttggc gactggcgta
     1321 gtttcgatgg ttttcgccat accgtggaac attcggttta tgtccatccc gatcatcagg
     1381 gcaaaggtct ggggcgtaaa ttgttaagcc gattgattga tgaagcgcgg gatagcggga
     1441 agcatgtcat ggtcgccggg atcgaatcgc aaaatcaggc ctcgctgcat ctgcaccatt
     1501 cgctgggatt tgtcgtcacc gcacaaatgc cgcaggtggg cactaaattt gggcgctggc
     1561 tggatctgac atttatgcag ttgcaactcg acgaacgcac tgaaccggac gcgattggat
     1621 gaatcagtcg ctcacccttg cttttttgat tgccgccgga attggtctgg tagtccagaa
     1681 cacgctgatg gtgcgcatca cccagacctc ctctaccatt ctcatcgcca tgttgctgaa
     1741 ctcactggtg gggattgtgc tctttgtttc tattttatgg tttaaacaag gcatggcggg
     1801 gtttggcgaa ctggtgtcca gcgtgcgctg gtggacactt atacccggct tgctgggatc
     1861 gttttttgtc ttcgccagta tcagcggata tcagaatgtg ggagcggcga caactattgc
     1921 agtactggtc gccagccagc taattggcgg tctgatgctg gatatcttcc gcagtcatgg
     1981 cgtaccacta cgggcgttgt tcggcccaat ttgtggcgca attttacttg tggttggcgc
     2041 ctggttggta gccagacgct cattttaatc agaggatggt gccgcctttg gttaactgtt
     2101 cgtggcgcgc ttccatatct tctttatgct tgcgaccgtg atgagcaata gcggtgcgca
     2161 aacgctgctg ctgggtgtag cgatcttccc gacttaactc cgcgtcatcg ctcagggcga
     2221 ttaataattc gttcatatgg gcaatgacgc tctcttcaat cgcggcatcc acgcgcgcga
     2281 tgacttcatc cagatgcgac atactttctc cttaaccact tgtgaaattt atcgattcat
     2341 ccaaatgata taagtctgcg tggtgccgtc aagccagtga gtaagattta aaacagtgaa
     2401 aacaacagcg ccaccgggaa actcatcggc catgttgccc ccaccagaaa ggcgcttaag
     2461 aaacggatgc gtttcttatc gtgagaaaga aaccaggtga taagaaatgc gattgctgcc
     2521 ataaccgcat aaaaaacaag catatgttga tagagagaca tgtacgggcg tccagccaga
     2581 tgaataaaac gcgcgcaaat atgcgtcatt ttttgacgtg catcaagttt tttcaccagt
     2641 ttgagaaaaa atcatcaaac agcaacttgc ccttatccat cttcagaatg agtattattg
     2701 cggattttct taacccgtac tatacacata ggggcaatga taaaaggtgg caaaaatgaa
     2761 tgtttccagt agaactgtag tactgataaa tgtctttgct gctgttggtt tgtttactct
     2821 tatctctatg agatttggct ggtttatttg atgtagtgat tttgcacgca gcacgtactg
     2881 tcagagaaat caactctctg acagtacgca agatcttctc atactctcca ggtttacaac
     2941 attatcctta atatttactt ctttttgctg gcatctacat tgaaatgagt agaaaacatc
     3001 cccctactgt cgtctataca aacagcttac tgattcaaac ggaatcttgt tttcacattt
     3061 ttctatcatg aatactttat acgcgcggga gtctata
//
LOCUS       DADMJE010000258         3087 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.263, whole genome shotgun sequence.
ACCESSION   DADMJE010000258 DADMJE010000000
VERSION     DADMJE010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.263"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..191)
                     /locus_tag="JN001_004035"
     CDS             complement(<1..191)
                     /locus_tag="JN001_004035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY9055062.1"
                     /translation="MAQVINEMDVPSHSFVFHGTGERYFLICVVNVLLTIITLGIYLP
                     WALMKCKRYLYANMEVNGQR"
     gene            384..886
                     /locus_tag="JN001_004036"
                     /pseudo
     CDS             384..886
                     /locus_tag="JN001_004036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026287.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
     gene            complement(932..1348)
                     /gene="rraB"
                     /locus_tag="JN001_004037"
     CDS             complement(932..1348)
                     /gene="rraB"
                     /locus_tag="JN001_004037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E inhibitor RraB"
                     /protein_id="HAY9055063.1"
                     /translation="MANPEQLEEQREETRLIIEELLEDGSDPDALYTIEHHLSADDLE
                     TLEKAAVEAFKLGYEVTDPEELEVEDGDIVICCDILSECALNADLIDAQVEQLMTLAE
                     KFDVEYDGWGTYFEDPNGEDGDDEDFVDEDDDGVRH"
     gene            1510..2514
                     /gene="argF"
                     /locus_tag="JN001_004038"
     CDS             1510..2514
                     /gene="argF"
                     /locus_tag="JN001_004038"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HAY9055064.1"
                     /translation="MSGFYHKHFLKLLDFTPAELNSLLQLAAKLKADKKSGKEEAKLT
                     GKNIALIFEKDSTRTRCSFEVAAYDQGARVTYLGPSGSQIGHKESIKDTARVLGRMYD
                     GIQYRGYGQEIAETLAEYAGVPVWNGLTNEFHPTQLLADLLTMQEHLPGKAFNEMTLV
                     YAGDARNNMGNSMLEAAALTGLDLRLVAPQACWPEAALVTECRALAQQNGGNITLTED
                     VAKGVEGADFIYTDVWVSMGEAKEKWAERIALLRDYQVNSKMMQLTGNPEVKFLHCLP
                     AFHDDQTTLGKKMAEEFGLHGGMEVTDEVFESAASIVFDQAENRMHTIKAVMVATLSK
                     "
     gene            complement(2586..>3087)
                     /locus_tag="JN001_004039"
     CDS             complement(2586..>3087)
                     /locus_tag="JN001_004039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001600920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA-binding protein"
                     /protein_id="HAY9055065.1"
                     /translation="SRKLQELIWDKLVAYVNDFNLSNQEKSRLILRLFDDVKLLFNEV
                     PVSILVNDIFLKDFFMKQPDFAKWYFYQLLKKYEGEQLYLNELGYVYGNEEKTNEIVN
                     NNPGYVVEIFEEKMGNELKIRTRMMEILRDGKINICEYINKEQLEKLNPPEDLRIAIK
                     KLGWNN"
BASE COUNT          864 a          703 c          659 g          861 t
ORIGIN      
        1 cgttgtccgt taacttccat attagcatag agataacgct tacatttcat taatgcccat
       61 ggtaaataga tacctagcgt tataatcgtt aacaacacat tcaccacaca aataagaaaa
      121 tatctctcac ctgtaccatg aaaaacaaac gaatgggacg gaacatccat ttcattaata
      181 acttgagcca taaaaattcc ctgaattaaa aaatccattg atataattta tatatacaga
      241 cagtaaaatg ttctgccacg ttacaatact cttatcagta ataggctggc aaaaacttta
      301 ttgctttata agatgcttgc gcacgtaaga agagagtggt attaaacaaa tgtataatta
      361 ctttattttt attgggttaa actatgaata acattgcgcc gcaatcacct gtaatgcgtc
      421 gcctgacgct acaggataat cctgctattg cccgcgtcat tcgtcaggta tccgccgaat
      481 acggtcttac cgctgataaa ggctacaccg tcgccgatcc gaatcttgac gaactgtatc
      541 aagtgtatag tcagccgggt catgcatatt gggtggttga gtacgagggt gaagtggtcg
      601 gcggcggtgg gattgcgcca ttagcaggta gtgaatcgga catttgcgaa ctgcaaaaga
      661 tgtattttct tccggctatt cgcggtaaag ggctggcgaa aaaactggcc ttaatggcga
      721 tggagcaggc acgagagatg ggcttcaaac gctgctatct ggaaacgacc gctttttaaa
      781 ggaagccatt gcgctttatg agcatttggg ctttgagcat atcgactatg cacttggctg
      841 cacgggccat gttgattgtg aagtgcggat gttgcgcgaa ctctaaaaaa atgcccgcta
      901 gtgtgtgcta tcgggcattt taatcaatta attagtggcg aaccccgtca tcgtcttcat
      961 cgacaaaatc ttcatcgtcg ccgtcttcgc cattaggatc ttcaaaataa gtgccccaac
     1021 cgtcgtactc aacgtcaaat ttctccgcca atgtcatcag ttgttcaacc tgggcatcga
     1081 tcagatcggc attcaacgcg cactcgctga ggatgtcgca gcaaatcacg atatcaccat
     1141 cttcaacttc cagctcttct ggatcggtca cttcgtaacc gagtttaaac gcttcaactg
     1201 ctgctttttc cagggtttcc agatcgtctg cggaaagatg gtgttcgatg gtgtacagcg
     1261 cgtccggatc gctgccatct tccagtaatt cttcaataat caaacgagtt tcttcacgct
     1321 gttcttccag ttgttccggg tttgccatgg ctcattcctc ttaatgtcct gccgatactc
     1381 ttattgtcac ataccactga cattgcctcc acctttgtga caaagattta tgcttcagac
     1441 ttgcaaatga ataatcatcc atataaattg aattttaatt cattgaggcg ttagccacag
     1501 gagggatcta tgtccgggtt ttatcataag catttcctga aattactcga tttcacgcca
     1561 gctgaactca acagcctgct gcagttagcc gcgaagctga aagccgataa gaaaagcggc
     1621 aaagaagaag ccaaactcac tggtaaaaac atcgcgctca tcttcgaaaa agactcgacc
     1681 cgtacccgat gctctttcga agttgccgca tatgaccagg gtgctcgcgt tacttatctc
     1741 ggcccaagcg gcagtcagat tggtcataaa gagtcgatta aagacactgc ccgcgtgctg
     1801 ggtcgcatgt atgacggtat tcagtatcgc ggctatggtc aggagattgc cgaaacactg
     1861 gcggaatacg ctggcgtgcc ggtatggaac ggcctgacca atgagtttca ccccacgcag
     1921 ttgctggcgg atctcctcac catgcaggag catttacccg gtaaagcatt caacgaaatg
     1981 acgctggtct atgcaggtga cgcacgtaac aacatgggca attcgatgct cgaagctgcg
     2041 gcgcttaccg gtctggattt gcgtctggtc gcgccacagg catgctggcc ggaagctgcg
     2101 ctggttacgg aatgccgcgc cctggcacag caaaatggcg ggaatattac gctgacggaa
     2161 gatgtagcca aaggagttga aggtgctgac tttatctata ccgatgtatg ggtgtcgatg
     2221 ggggaagcaa aagagaaatg ggcagaacgg attgcattac tgcgtgatta tcaggtgaac
     2281 agcaagatga tgcagttgac cggtaacccg gaggtcaaat tcctccactg cctgcccgcg
     2341 tttcatgacg accagacgac gcttggtaag aaaatggcgg aagagtttgg cctacatggc
     2401 ggaatggaag tgactgatga ggtcttcgaa tctgccgcca gcattgtttt tgatcaggcg
     2461 gaaaaccgca tgcataccat caaagcggtg atggtcgcga cgctcagtaa ataattgata
     2521 tcgcaataaa gatgccggga aatacaaaaa catcccggca tcacattatt ttatgcagta
     2581 atagttcaat tattccaccc caattttttt attgctatac gtaaatcttc cggaggattt
     2641 aatttttcta actgttcttt attaatatat tcacatatat ttattttccc atcccggagg
     2701 atttccatca ttcttgttct aatttttaat tcattaccca tcttttcttc aaaaatctca
     2761 acgacataac ccggattgtt atttacaatt tcatttgttt tttcttcatt accataaaca
     2821 tatcctaact cattaagata cagctgttcg ccctcatact tcttaagtaa ttgatagaag
     2881 taccacttcg caaaatcagg ttgcttcatg aaaaaatcct tcaaaaaaat atcatttact
     2941 aaaatgctga caggcacttc attaaatagc aacttaacat catcaaataa ccttagtatt
     3001 aagcgtgatt tttcttgatt gcttaagtta aaatcattga catatgcaac caacttatcc
     3061 caaatcaatt cctgtaattt acggcta
//
LOCUS       DADMJE010000259         3064 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.264, whole genome shotgun sequence.
ACCESSION   DADMJE010000259 DADMJE010000000
VERSION     DADMJE010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.264"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(48..232)
                     /locus_tag="JN001_004040"
                     /pseudo
     CDS             complement(48..232)
                     /locus_tag="JN001_004040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311258.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4102 domain-containing protein"
     gene            complement(394..468)
                     /locus_tag="JN001_004041"
     tRNA            complement(394..468)
                     /locus_tag="JN001_004041"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(433..435),aa:Arg,seq:cct)
     gene            complement(544..1476)
                     /locus_tag="JN001_004042"
     CDS             complement(544..1476)
                     /locus_tag="JN001_004042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HAY9055066.1"
                     /translation="MDNDKIDQHSDEIEVESEEKERGKKIEIDEDRLPSRAMAIHEHI
                     RQDGEKELERDAMALLWSAIAAGLSMGASLLAKGIFHVELEGVPGSFLLENLGYTFGF
                     IIVIMARQQLFTENTVTAVLPVMQKPTMSNVGLLMRLWGVVLLGNILGTGIAAWAFEY
                     MPIFNEETHDAFVKIGMDVMKNTPSEMFANAIISGWLIATMVWMFPAAGAAKIVVIIL
                     MTWLIALGDTTHIVVGSVEILYLVFNGTLHWSDFIWPFALPTLAGNICGGTFIFALMS
                     HAQIRNDMSNKRKAEARQKAERAENIKKNDKNPA"
     gene            1770..2525
                     /gene="mlaA"
                     /locus_tag="JN001_004043"
     CDS             1770..2525
                     /gene="mlaA"
                     /locus_tag="JN001_004043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipid-binding lipoprotein MlaA"
                     /protein_id="HAY9055067.1"
                     /translation="MKLRLSALALGTTLLVGCASSGTDQQGRSDPLEGFNRTMYNFNF
                     NVLDPYIVRPVAVAWRDYVPQPARNGLSNFTGNLEEPAVMVNYFLQGDPYQGMVHFTR
                     FFLNTILGMGGFIDVAGMANPKLQRTEPHRFGSTLGHYGVGYGPYVQLPFYGSFTLRD
                     DGGDMADGLYPVLSWLTWPMSVGKWTLEGIETRAQLLDSDGLLRQSSDPYIMVREAYF
                     QRHDFIANGGELKPQENPNAQAIQDDLKDIDSE"
     gene            complement(2707..3042)
                     /locus_tag="JN001_004044"
     CDS             complement(2707..3042)
                     /locus_tag="JN001_004044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001315756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055068.1"
                     /translation="MAESFATGSDHQVVNELNGERLREPNEVFKRLGRAIRYNFQVDD
                     AKFRRDNVKEIISTLFANKVDVDHPENKYKDFKDLEDKVEKRLQNRQTEYQNEINQLS
                     APGVNFDDI"
BASE COUNT          765 a          706 c          712 g          881 t
ORIGIN      
        1 atcttttacg gggtgaaggt agatttcgta tgaagggtat ctgttgtctc ctgcaaagtc
       61 ataagcggat attttcctac ggtcagtatt tttttcttac cgtcaatctt gtagcgaagt
      121 tgccatacct tttcccggat acaggaacat aaaggtacag gccattacca tcgagaaggc
      181 ggtatggttt ttctttcggc tttgctgctt caatctgctt cacggtgagc atgggtaaaa
      241 atccggtggg taaaattatt ttatccactt tttacccgtc atggagtgcg gctgtcaacg
      301 atctgacgcg aaccatgacg aaccgtgaat atacggaagg cttgatattc aggggatttt
      361 gcggactggt acggatggga gcgaactgat aaatggtgtc ccctgcagga atcgaacctg
      421 caattagccc ttaggagggg ctcgttatat ccatttaact aagaggacaa tgcggcatga
      481 gtatacccgc taatggactg cggagtaagt acactgccgc tcgattgctt aaaccctcgc
      541 catttatgct gggtttttat catttttctt aatgttttcc gcacgttctg ctttttggcg
      601 tgcttctgct ttgcgcttgt tgctcatgtc gttacggatc tgtgcatgac tcattaacgc
      661 gaagataaag gtgccgccgc agatattccc cgctaaagta ggtagtgcga agggccaaat
      721 gaaatcgctc cagtgcagcg tgccgttaaa caccagatag aggatttcta cagaaccgac
      781 aacgatgtgg gtggtgtcac ccagtgcaat aagccaggtc atcaatataa tcaccacaat
      841 ctttgccgca cccgctgcag gaaacatcca aaccatagtg gcgatcagcc agccggaaat
      901 gatcgcgttg gcaaacatct cgctgggggt gttcttcatc acatccatgc cgattttgac
      961 aaatgcatcg tgagtttctt cattgaagat aggcatatat tcaaatgccc atgcagcaat
     1021 acctgtcccg agaatattac ccagcagcac gacgccccat aatcgcataa gtaagccgac
     1081 gttgctcatt gtcggttttt gcatgacggg tagtaccgca gtcacggtgt tttcggtaaa
     1141 taattgctgg cgggccataa tgacgataat aaaaccaaag gtataaccga gattctccaa
     1201 caagaagctg cccggcacgc cttccagttc gacatgaaat atcccttttg ccagtaacga
     1261 agcgcccatc gacagacccg ccgcaatggc tgaccacagt agtgccattg cgtcgcgttc
     1321 cagctctttt tcaccatcct ggcggatatg ttcatgaatt gccatcgccc gggaggggag
     1381 tcgatcttca tctatttcta tttttttgcc gcgctctttt tcttcgctct caacttcaat
     1441 ttcgtcgctg tgttgatcaa ttttgtcgtt gtccatggtc tcttctcttg aattagcacg
     1501 tatagctaaa gcgtagcggc ttttttgctc gcaactggcg ggagttactc tgaaaatgta
     1561 gaaaaggccg cgtttgcctt tttctgtttc tatagaatca agtagcctac agggcggcga
     1621 ttaccaggct atgatcaaat cagcaaatca gggcgtctgg acatcagttg acgtgctgtt
     1681 acaatcgccc acacctaaac aggcggatac ggtatcgttc cgtcatggat ggcaaactgc
     1741 ataagccata aaaaaacagg gagacattta tgaagcttcg cctgtcggcg cttgctctgg
     1801 gaactacgct tctggtgggg tgtgcgagtt ccggtacaga tcagcaaggg cgttctgacc
     1861 cgttagaagg gttcaaccgc accatgtaca acttcaactt caatgtatta gacccgtata
     1921 ttgttcgacc ggtcgctgtc gcctggcgtg attatgttcc gcaaccggcg cgtaacggtt
     1981 tgagcaactt taccggcaac cttgaagaac ctgcggtgat ggttaactac ttcttgcagg
     2041 gcgaccctta tcaggggatg gtccacttta cccgcttttt cctgaacacc attttgggga
     2101 tgggcggctt tattgatgtt gcagggatgg cgaacccgaa actgcaacgg actgaacctc
     2161 accgcttcgg tagtacgctt ggtcattatg gcgtgggtta tgggccttac gttcagttac
     2221 cgttctacgg tagcttcacg ctgcgtgatg acggtggtga tatggcggat ggtctttacc
     2281 cggttctttc ctggctgacc tggccgatgt ctgtgggtaa atggacgctt gaagggatcg
     2341 aaacccgcgc tcagctgctg gattccgatg gtctgctgcg tcagtcgtcc gatccttata
     2401 ttatggtgcg cgaagcgtac ttccagcgtc atgatttcat cgctaatggc ggcgaactca
     2461 aaccgcagga aaatccgaac gcacaagcga ttcaggatga tttaaaagat attgattctg
     2521 aataagaaac aaataaaaaa ggtgagtcgc aaaactcacc ttttttgttg ttatccctca
     2581 attaccacaa gtaaaaggag ataaaccgac aatgacccgg acgtaatgat gtaaaaatac
     2641 tgatgttcgt cactgactat ttccgatatt caggcgttga aaaatcaaaa aactggaaaa
     2701 ataattttaa atatcatcaa aattaacacc tggcgcagat agttgattaa tttcattttg
     2761 atattccgtc tggcgatttt gaagcctttt ttcaacttta tcttcgagat ccttaaagtc
     2821 tttgtattta ttttcaggat ggtcaacgtc aactttgtta gcgaataaag tagaaattat
     2881 ttcttttaca ttatcgcgtc taaattttgc atcgtccact tgaaaattat atcttattgc
     2941 tcgacctaaa cgtttaaaaa cttcgttagg ttctctcagt ctttccccgt tgagctcgtt
     3001 tacaacctga tgatcggaac ctgttgcaaa tgattctgcc atgatagctt tactgctttc
     3061 aaac
//
LOCUS       DADMJE010000260         3030 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.265, whole genome shotgun sequence.
ACCESSION   DADMJE010000260 DADMJE010000000
VERSION     DADMJE010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3030)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3030)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3030
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.265"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..465)
                     /gene="virK"
                     /locus_tag="JN001_004045"
     CDS             complement(<1..465)
                     /gene="virK"
                     /locus_tag="JN001_004045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY9055069.1"
                     /translation="MFSVSNLSFIGFLKRIVFSSDSLPGKWEHRKFRFMYILRCAINP
                     VASIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSSSGFDREGELMLSLFYNKTVI"
     gene            complement(470..1558)
                     /gene="capU"
                     /locus_tag="JN001_004046"
     CDS             complement(470..1558)
                     /gene="capU"
                     /locus_tag="JN001_004046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HAY9055070.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKLGIDITFALFRNSLHIPTAWRLLGIVHGFQPNAIVCHSGHDSNIVGLVRLFTW
                     KHPFRIIRQKTYLTQKTKVFSINHFCDEVIVPGTSMKTHLEQEGCRTRVTVVPPGFDF
                     QKLYVDSRNSLPPNVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVLASQIGGIPDVIQNNQTGTLLPAGNKHAWMCALNDFFNDPGRFYQM
                     ARQAKQDIEERFDINKTALKILTLAKHK"
     gene            complement(1561..2403)
                     /locus_tag="JN001_004047"
     CDS             complement(1561..2403)
                     /locus_tag="JN001_004047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY9055071.1"
                     /translation="MLNEGGILFKANHVPVLMYHHVSHCPGLVTLSPVTFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLKEFNLKAHIFLIT
                     GFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKFSSREEQCKHLRQDLLSGREYLKEMTGKCSKHLCWPEGYYNKDYIQVAEELG
                     FYYLYTTERRMNAPAKGTTRIGRISTKERESCAWLKRRLFYYTTPFFSSLLAFHKGPR
                     LPDD"
     gene            complement(2767..2883)
                     /locus_tag="JN001_004048"
     CDS             complement(2767..2883)
                     /locus_tag="JN001_004048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004996477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY9055072.1"
                     /translation="MPGIPPEIRWNNQKNALQLWNKEGGVVRREGDPLEMAQ"
BASE COUNT          913 a          696 c          556 g          865 t
ORIGIN      
        1 aataactgtt ttattgtaaa acaatgacaa catcaactct ccttcccggt caaaaccact
       61 ggaagaacac tggatatcaa aattctctcc atctttcccg atgaattgga ctaatgatac
      121 cgatttttgt ggaaacaaaa atttagaata tttttctggc aaattttgca caaagcgata
      181 atgctcaaga atatattgtc cacgggtcca ggcgcgcccc cctttatgca aataagggcg
      241 atgaattctt gctggcaacg tggggtgtat tgccagaata tcctcaatgc acggcaagga
      301 acgcagttcg taataatatc gaatactggc aaccggattt atagcacatc gcaaaatgta
      361 catgaaccgg aattttctgt gttcccactt ccccgggagt gaatctgagg aaaaaacaat
      421 ccttttaagg aaaccgataa atgataagtt acttacagaa aacatattgt tacttgtgct
      481 tcgctaatgt gagtattttt aacgcagttt tattaatatc aaaccgctct tctatatcct
      541 gttttgcctg gcgagccatc tgataaaaac gcccagggtc attaaaaaaa tcattcaggg
      601 cgcacatcca tgcgtgctta ttacctgctg gtaacaatgt cccggtctgg ttgttctgaa
      661 taacatcagg gattccacca atctgactgg ccagtacagg cacagaaaat gccgatgctt
      721 ctgccagtac cataccaaac gattcgtttt ctgaaggcag aaccaccaga ctggcaaccc
      781 gatatacggg ggcggcagga aaaacattgt cagcaataaa aacatcatca tgcatgccca
      841 tactgtcaat ctgatactgt aaatgctccc gcagttcagg cgaaccagac cccacaatca
      901 accaacagaa ctgtcgtcca ttcattttta aatggaacag taaattcaac ataaattcgt
      961 gccctttttc cgggcgcaac attcctacct gagcaataac ggggcatccc cttcgggacg
     1021 ccagccaaga aagaacattt ggaggcaaac tgtttcggga atcaacgtat aatttctgga
     1081 aatcaaagcc tggaggcaca acagtaaccc gggttcgaca tccttcctgc tccagatgtg
     1141 tcttcatact tgttccggga acaatcacct catcgcaaaa atgatttatt gaaaaaactt
     1201 ttgttttttg tgtcaaatat gtcttttgcc tgataattct gaatggatgt ttccaagtga
     1261 ataaccgtac taaaccaaca atattgctat catgcccact gtgacaaacg attgcattgg
     1321 gctgaaaacc atgaactatt ccgagtaatc tccatgcagt agggatgtga agactgtttc
     1381 gaaataacgc gaatgtgata tcaattccca atttactggc ttcaaaagca attttgctgt
     1441 tttccctgca gacaagcaga actgaatgcc ccattttctt cagggccttc atttgagcaa
     1501 cagcctgtaa ttcctgacca cctatattcg gtgatgattc cgtaaatagt atattcatta
     1561 ttaatcatcc ggtaatcttg gccccttatg aaaggccagc aacgatgaaa aaaacggtgt
     1621 tgtataataa aaaagtcgtc ttttcagcca tgcgcaactt tcccgttctt tggtgcttat
     1681 tcttcctatc cgtgtagttc ctttagcagg agcattcatt cttctttctg ttgtatataa
     1741 ataatagaat ccaagttctt cagcgacctg aatataatcc ttattataat aaccttccgg
     1801 ccaacacaaa tgtttactgc attttcctgt catttctttc aaatattctc tcccactcaa
     1861 caagtcctgc cgaagatgtt tacactgttc ttctcgtgaa ctgaactttt tatcccagcg
     1921 tgtatgagta tgcgtatgaa catgaaattc gaccagacca gattgcaaca tttcgtttac
     1981 ttcagaccag cgaagcataa cattatcagc attccctgtc gctatttgat gttcgcaatc
     2041 gcgatgagaa tattcctttc caggagagtg acgaaccgga ccattcccaa taaaaccggt
     2101 aattaaaaaa atatgtgctt tgagattaaa ctcttttaat aaaggatata cctgaaacca
     2161 gttgtcaagg tatccatcat caaatgtcaa cataacgctt ttccggggga gttttccgcc
     2221 ccgataaaaa aactccagtt catctgatga cagtgttttc cagttatttt cagccaacca
     2281 tttcatttgc ttccggaatg tcacgggaga aagtgtaacc agtccggggc aatgactgac
     2341 atgatgatac attaataccg gaacatgatt ggctttgaac aaaatgcccc cttcgtttaa
     2401 catttaaagt ttctggcacc tagtaagcag agacaaaagg aaaacccaat aaagctggtg
     2461 cattttattt ccagatactg gatgaataac atagcaaacc catggcatac tcgatatatt
     2521 ttactaaatt aaacatcaac aattcataaa caatgatata ttatcatatc ttttaaaaac
     2581 gactcactaa gaaccttgag gtggcacact gaatttggct acctgaacag aggtgatatg
     2641 ttcacctcag aacaacacag gtgctccaat gaaaaaaagg aatttcagcg cagagtttat
     2701 ttacggggtg acgctttcat taacctgtac acgaacttct attccggcat catgacaggc
     2761 ctgcagctac tgcgccattt ccagcggatc gccctcccgg cgtaccaccc caccttcttt
     2821 attccataac tgcagagcat ttttctgatt gttccatctg atttcggggg gtattccggg
     2881 caaggttgtt cagtaaggca ttccttcgta aaatcagcat gttttttgca cgacggaaac
     2941 cggcagccat gaaaatctgt ctttatcata ctctgaatcc tgacacgatc ccgggttata
     3001 aaaaatttgc acaggctatt gccaccgata
//
LOCUS       DADMJE010000261         2985 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.266, whole genome shotgun sequence.
ACCESSION   DADMJE010000261 DADMJE010000000
VERSION     DADMJE010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2985
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.266"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..750)
                     /locus_tag="JN001_004049"
                     /pseudo
     CDS             complement(1..750)
                     /locus_tag="JN001_004049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS66-like element ISSfl3 family transposase"
     gene            complement(756..1268)
                     /locus_tag="JN001_004050"
                     /pseudo
     CDS             complement(756..1268)
                     /locus_tag="JN001_004050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309983.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1367 family protein"
     gene            complement(1307..1594)
                     /locus_tag="JN001_004051"
     CDS             complement(1307..1594)
                     /locus_tag="JN001_004051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055073.1"
                     /translation="MKIEELREIFSENGLYAVRVENGAIVSHCRIRCLQSQQRKSGAV
                     LFYFCNGLLTDGFILREDEFVTSLRVLKEIGFKAGFLLLLKNKLIYNLEQD"
     gene            complement(1844..2056)
                     /locus_tag="JN001_004052"
     CDS             complement(1844..2056)
                     /locus_tag="JN001_004052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY9055074.1"
                     /translation="MLCTCRLASYMPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFVDYESRK"
     gene            complement(2227..2892)
                     /locus_tag="JN001_004053"
     CDS             complement(2227..2892)
                     /locus_tag="JN001_004053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="epoxyqueuosine reductase QueH"
                     /protein_id="HAY9055075.1"
                     /translation="MTVADFKRPKLELPNGANKLLLHSCCAPCSGEVMEALQASGIDY
                     TIFFYNPNIHPQKEYLIRKDENIRFAEQHGVPFIDADYDTDNWFERAKGMEWEPERGI
                     RCTMCFDMRFERTALYAAENGFSVISSSLGISRWKNMQQVNDCGRRAVAHYPGMVYWD
                     YNWRKQGGSSRMIEISKREKFYQQEYCGCVYSLRDTNLHRKSQGRPLIKIGQLHYGKE
                     EKE"
BASE COUNT          700 a          817 c          679 g          789 t
ORIGIN      
        1 gggcagcagt tcatgcactt ggttcgacgg ccagtcattg agcttctcga tcacttcgcg
       61 caaccagtcc tccggctcca cttcgttctg tttgcaggtg accagcagac tgtagatgat
      121 cgccgcactt tctcctccct tgtctgagcc gaaaaagaga taattttttc ttccaaccgc
      181 caccgatcgt aacgcgtttt caccgatgtt gttgtctatt tccacccagc cgtcacgaca
      241 gaactcgttc agcgcattcc agtgattcag gatatagtcg aacgccttcg ccatctccgc
      301 atgtttcgac agcgttttcc tctgcaactg tatccagtcg tacaatgact gcatcaactg
      361 gacgcttctg gcttttctga ctgcaagccg ttcctctgcc ggactgccac gtatctccgc
      421 ttctatgtcg tataactctg ctatccgtct gagcgcttcc tgagtcattt ctgtcggacg
      481 gcgcacatcc tcgtcatgga tttttcggcg ggcgtgggcc aggcacccgg cttccttcac
      541 ccggcccgtt tcgtacagta cgttataacc tgcataggca tcagcctgca gtacgccctg
      601 atactttgcc aggtggagct gcggatgttc tcctttgcga tctgccgaat acgcgaacca
      661 gacggctgcc ggcagggatg aacccgcatt acgatcatcc ctgacgtata cccacagacg
      721 acccgttttc gtctttccgt tccccggggc ggttcattca gcacagattt ataaacctgc
      781 tgaaactcgg tttcgtccat attcgcaaac gagatggatt tcgccctgcg cccacggcta
      841 ccgtccggat aaatatgctc ggtgtaaaat ccggcctgaa tggttaccca ctcgcggaaa
      901 gcctcaaacg actttagcaa tgctgtatct cgggttctgc gtgtcgcaac tgtattcaga
      961 tattgctctg cggcttcgct cagagctggc gtatgttccc ggcctactga ttcgcacagg
     1021 tactcaacga agcctgatac cagttctcgt tcgcgaggcg taatcgcccc accgatcgga
     1081 gtccagtaat cgaatcccag ttgcaggagt ttgaaaaaac gcttgtggaa tgcgtagtta
     1141 cgcacacgct taaagtctgc gtgtatccac tcacctgttt tgatttgatg cagaaaatcg
     1201 caactctccg gcgtcgccgg gagaagtaat ccggaagagg tttgtttgat cagttgtata
     1261 tgcgccatcg gctttctccg gtggcacggt gttacacagc aggagttcaa tcctgctcaa
     1321 gattgtagat gagtttattc ttcagcaaaa gcagaaaacc agccttaaaa ccaatctctt
     1381 tcaaaacccg taatgatgtg acaaattcgt cctcacgcaa aataaaaccg tccgtcagaa
     1441 gtccattaca aaaataaaat aacacagcac cgctcttcct ttgttgagat tgcaaacatc
     1501 taatgcggca atggctgaca atcgctccat tctcaacgcg cacagcatag aggccatttt
     1561 cactaaaaat ttcacgcaat tcttcgattt tcatcttcag aatccttcca gataaatagc
     1621 tctcccctgt tcggggtcca tccctcttct ccctgcgcgc tacttaagtg agtcgattct
     1681 atctgcgaag gtgcgcgaat caaattcacc ggaaataaac aacaaaaaac ccgccgaaac
     1741 gctgagagat cacagcgatg ggcgggttaa gtgcgggtgc gttgaggatg cctgacacat
     1801 cagaggtggg cggggatggg atcagctccc cgcccggtca ctcttacttc ctggattcgt
     1861 agtctacgaa gacagcgacc tccgtctggc cggttcggat tcgtacctca cagaggtctt
     1921 tcctcgttac cagtgccgtc actatgacgg ttaaacagat gacgatcagg gcgattaaca
     1981 tcgccttttg ctgcttcata gcctgcttct ccttgccttt cggcatgtaa gaggctaacc
     2041 tacatgtgca aagcatgaaa ttggcctcag attaatgtta agcgtcttgc cggacgcgta
     2101 atgttaactg gggcttttct ctatctgcct tttggtgttc atgcctgaag cagatagcct
     2161 caagcacccg cagtcattct acttacctcg ccaatatgaa atcaatcaga aaggtgcccc
     2221 ataaaatcac tccttctctt ctttaccgta gtggagttga ccaattttga taagagggcg
     2281 tccctgagat ttgcggtgta gattggtatc gcgcagagaa tacacacagc cacaatattc
     2341 ctgctgatag aatttttcgc gcttgctgat ttcaatcata cgggacgagc ctccctgctt
     2401 gcgccagtta taatcccagt acaccatgcc cggataatgc gcgacggctc gccgcccaca
     2461 gtcgttaacc tgctgcatat ttttccagcg tgaaatgccc agtgaactgc tgatcacact
     2521 gaaaccattt tcagcggcgt acagcgctgt ccgctcaaaa cgcatgtcaa aacacatggt
     2581 gcaacggatc cctcgttcgg gctcccattc cattcctttg gctcgttcaa accagttgtc
     2641 tgtgtcgtaa tcagcatcaa taaacggcac gccgtgttgt tcagcaaagc gaatattctc
     2701 atccttacga attaaatact ctttctgagg atgaatgttc gggttgtaga aaaagatggt
     2761 gtagtcgatt cccgaggcct gaagcgcctc catcacctca ccggaacatg gagcacagca
     2821 agagtgcagt agtagtttgt ttgccccgtt tgggagctcc aatttgggcc gtttgaaatc
     2881 agcaactgtc ataaatatgt ttattggggt cataaaaata tcaaagagtg tagcattaga
     2941 acggggctat cggaaacaga tgtgtgactg ctccccgccc tttcg
//
LOCUS       DADMJE010000262         2942 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.267, whole genome shotgun sequence.
ACCESSION   DADMJE010000262 DADMJE010000000
VERSION     DADMJE010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2942)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2942)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2942
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.267"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            577..1293
                     /locus_tag="JN001_004054"
     CDS             577..1293
                     /locus_tag="JN001_004054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055076.1"
                     /translation="MNDNSLLRNSSLFIAYMGCVGWVSAYSYGWGTSFYYGFPWWVVG
                     AGLDDVARSLLYAIIVMGILFTGWGIGILFFLLIKKRSKIQDLSFFRLFFAITLLFFP
                     VIFELLILKQYFILPLSLSCIISSLVISIIIRIYGRIFSVSCFSDIPFVREHRIKLIM
                     AGFLVYFWLFSFLVGWYKPQLKKEYQMLCYNNSWYYVLARYDSRLVLSSSFKDDSNRF
                     LIFNTEQSGFYEINDVYVRK"
     gene            1845..2249
                     /locus_tag="JN001_004055"
     CDS             1845..2249
                     /locus_tag="JN001_004055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858300.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055077.1"
                     /translation="MNTALIVALMCMWYAVPAAAKETLLAMPRNSTEHCYAEINVHGP
                     YGVYFRVVPHPPGGKSWVECNSDYYYSDKPPGVQILGTRAGCRVYGICGTTSTLHVAG
                     RGVVCIKNICSPRGMIIHRIRKRPVVAVSDEM"
     gene            2312..2611
                     /locus_tag="JN001_004056"
     CDS             2312..2611
                     /locus_tag="JN001_004056"
                     /inference="COORDINATES: protein motif:HMM:NF013677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055078.1"
                     /translation="MTKTVSTSKKTRKQHSPEFCSEALKLAERIGVAAAARELSLYES
                     QLYAWRSKLQQQMTSSERESELAAENARLKRQLAVQAEELAILQKAATYFAKRLK"
     gene            2608..>2942
                     /locus_tag="JN001_004057"
     CDS             2608..>2942
                     /locus_tag="JN001_004057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055079.1"
                     /translation="MKYVFIEKHQAEFSIKAMCRALRVARSGWYTWCQRRTGISPRQQ
                     FRQHCDSVVLAAAFTRSKQRYGAPRLTDELRAQGYHFNVKTVAASLRRQGLRAKASRK
                     FSPVSYRAHG"
BASE COUNT          824 a          605 c          667 g          846 t
ORIGIN      
        1 ttgtgggcca taaatattcc aaaaaaatag cccgctccgt ttattaccgg aacgggcgag
       61 agcatgacat tgtctgtaat tataatgaga ctgctgattc tacttatttt taatttcaag
      121 aaaagcgttt tctacaaaga attatgagat ttaatgtttt gtttagacaa tattgtcatt
      181 ctgttcaata atgaaagtct tcatcaacaa caagtaaaaa caacgtccct ctcatcgaac
      241 cggacttgca gatttcccgc atccggctct cttgcaacac atcagacctt cacgttcggg
      301 cggttatggg gaaggtccag caagctgtat gagccctaac tgtttgaata ccagtagatt
      361 accagaaact tctatcgatt gaagacatta ccaactagcg ttactaaatg ttgaccaagt
      421 tttgttcact tgtctggttt tgatagtagc attctgcaga gtattttgat atgataaata
      481 tgcattaaca atgatattat tgttaatttc ctagcatgaa aattaaaaga tcaacttttt
      541 atctcgaata ttttttacat tatcagttgg tttcttatga atgacaattc attgcttaga
      601 aattcttcat tattcatcgc ctatatggga tgtgtagggt gggtcagtgc ttattcttat
      661 ggctggggaa cctcttttta ctatggattt ccatggtggg ttgttggtgc aggtttggat
      721 gatgttgcca gaagtttact ctatgctatc atagtaatgg gtatactttt taccggttgg
      781 gggattggta ttttattttt tcttcttata aagaaaagaa gtaaaataca agacttgagt
      841 ttttttagac tattttttgc tattacccta ctgtttttcc ctgtaatatt cgaactttta
      901 attctcaaac aatatttcat acttccatta tcactttcat gcattattag ttcattggtt
      961 atttcaataa taattcgcat atatggacgg atcttttctg tatcatgttt ttcagatatc
     1021 ccttttgtta gagaacaccg cattaagtta attatggctg gttttttggt ttatttttgg
     1081 cttttttcct ttcttgttgg ctggtataaa cctcaattaa aaaaagaata tcagatgctt
     1141 tgttataata atagttggta ttatgttctt gctcgttatg attcacggct cgttttgtct
     1201 agttcattta aagatgacag taacagattc ttaatattta atacagaaca gtcgggattt
     1261 tatgaaatca atgatgttta tgtcagaaag taataatcct ctcccacaaa gtgaattaaa
     1321 cgaatatata atgcgttcga agtatatgta ttgagctgtc atactgagaa acaaacctta
     1381 gggcagcaca attaaagcca gaaacaacta tgcaagaaag ttactaaata agtgctcgga
     1441 acagtaaaac actcaggggg gactcagtcc agattatgta atcagataaa ttgccaaaca
     1501 tcacaaatca ccagcaggac tgagtgatgc cgagcattgc accaataccc cgtgatgaac
     1561 gatgcctgat gcagaaagct ccctataaaa caaagaacaa aaactacgac cggcgattca
     1621 ccgtcatact gatgctgcat cgtggtgaca ctgtctgtca ctttcatgtt gactgaacaa
     1681 ctctgctgcg aagaaggtgt accgccggcg ggatttgatt gtccggcgtc tagcttccac
     1741 ttccctgatg gaactgaaag ttgttatggc cggtcagctt gccctgtccg caggacatga
     1801 ggtgctgtga cggacagcac cagtaacgga aagtgacaat aaaaatgaat actgcgctga
     1861 tagttgcact aatgtgtatg tggtatgcgg tacccgctgc tgcaaaagag actttactgg
     1921 ctatgccacg taattcaaca gaacattgct atgcggagat taatgtgcac ggaccatatg
     1981 gggtgtattt ccgagtggtc ccgcatcccc ccgggggaaa gagctgggtc gaatgtaaca
     2041 gtgactacta ttactctgat aaaccaccgg gagtacagat actcggaacc cgtgcagggt
     2101 gtcgggtata cggaatctgc gggaccacct cgacactgca tgtggctgga agaggggttg
     2161 tgtgtattaa aaatatatgc agtccacgtg ggatgataat tcacaggata cggaaacgtc
     2221 ctgtagtggc tgtaagcgat gagatgtgat cttatccagc aatagtggac acgcggctaa
     2281 gtgagtaaac tctcagtcag aggtgactca catgacaaaa acagtatcaa ccagcaaaaa
     2341 aacacgtaaa cagcattcgc ctgaattttg cagtgaagcc ctgaagcttg ctgaacgcat
     2401 cggtgttgct gccgcagccc gtgaactcag cctgtatgaa tctcagctct atgcgtggcg
     2461 cagcaaactg cagcaacaga tgacctcgtc tgagcgtgaa agtgaactgg ccgctgaaaa
     2521 tgcccgcctg aagcggcaac tggcggtgca ggcagaggaa ctggctatcc tccaaaaggc
     2581 cgcgacatac tttgcgaagc gcctgaaatg aagtatgtct ttattgaaaa acatcaggct
     2641 gagttcagca tcaaggcaat gtgccgcgcg ctccgggtgg cccgcagcgg ctggtatacg
     2701 tggtgtcagc ggcggacagg gataagccct cgtcagcagt tccgtcagca ctgcgacagc
     2761 gttgtcctcg cggcggcctt tacccggtca aaacagcgtt acggtgcacc acgcctgacg
     2821 gatgaactgc gtgctcaggg ttaccacttt aacgtaaaaa ccgtggcggc aagcctgcgc
     2881 cgtcaggggc tgagggcaaa ggcctcccgg aagttcagcc cggtcagtta ccgcgcacat
     2941 gg
//
LOCUS       DADMJE010000263         2924 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.268, whole genome shotgun sequence.
ACCESSION   DADMJE010000263 DADMJE010000000
VERSION     DADMJE010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2924
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.268"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            13..171
                     /locus_tag="JN001_004058"
     CDS             13..171
                     /locus_tag="JN001_004058"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055080.1"
                     /translation="MYLSRISEAISLSAGEVAHRLIVPSSDIDLGETELPVLGEITWQ
                     AYDPARSK"
     gene            171..761
                     /locus_tag="JN001_004059"
     CDS             171..761
                     /locus_tag="JN001_004059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000380343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2313 domain-containing protein"
                     /protein_id="HAY9055081.1"
                     /translation="MDSLQDDYTKLLYGLMQPGPAWSDTDGVLDGLAPSLVRVHQRAD
                     ELVIEIDPGQSTELIERYEELYGLPDSCSPVGTQTLRQRQQRLEAKANVAGGINEQFF
                     LDQLEALGYTGVTIEQFQHLDASPDPEWGDRWRYFWRVTLPVDAGAQWQTCTDACNTP
                     IRTWGDTVAECVINKLCPSHTVVLFSYPDEDEDAQD"
     gene            748..1481
                     /locus_tag="JN001_004060"
                     /pseudo
     CDS             748..1481
                     /locus_tag="JN001_004060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000554725.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            1482..1955
                     /locus_tag="JN001_004061"
     CDS             1482..1955
                     /locus_tag="JN001_004061"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055082.1"
                     /translation="MAIALKNIQAGNAKKFTLSSANNSTKNAAFYLWGNPSRPVVAEL
                     GDDSGWHFYSQRNTDGSITFAVNGQVIPLNYGNFDARYKHRTEGVQDVRYGYEMYYNP
                     GSNTVSWTFRSPSGHGLSGISISDTGRNSADNVNGVYYRPLQKLINGIWYNVASI"
     gene            2015..2503
                     /locus_tag="JN001_004062"
     CDS             2015..2503
                     /locus_tag="JN001_004062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9055083.1"
                     /translation="MTKQYDVTWLFSEDGKNWYEEQKNFASDTIKMVYTGDGRVVWVG
                     KDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVS
                     ARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSAITDKSSYNAIEWPVSPEG
                     SS"
     gene            2527..>2924
                     /locus_tag="JN001_004063"
     CDS             2527..>2924
                     /locus_tag="JN001_004063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055084.1"
                     /translation="MSVVISGALTDGAGIPMSGCQIILKSRVNTSEVVMRTRADVVTG
                     NNGEYSFEAQVGKYCVYLKRDWRDEYCVGDIAVYDDSKPGTLNDFLTAPDEGDLKPDV
                     VKRFEEMVAQAQQSAGAAAGNAQQTAQDVAA"
BASE COUNT          763 a          644 c          830 g          687 t
ORIGIN      
        1 ccagaggggc gtatgtatct gtccagaatc agtgaggcca tcagtttgtc tgctggtgaa
       61 gtggcccacc ggttaatcgt cccttcatcg gatattgacc tgggggagac cgagcttccg
      121 gtgctcggcg agatcacctg gcaggcttat gacccggcaa ggagtaaata atggattcgt
      181 tacaggatga ttatacaaag ctgctgtacg gactgatgca gccggggcct gcatggtcag
      241 ataccgacgg tgtacttgac ggtctggcac catcgcttgt gcgtgttcac cagcgggctg
      301 atgaactggt gattgaaatc gatcccggtc agtccacaga gctgattgaa cgttatgaag
      361 aattgtatgg tttacctgat tcctgttccc ctgtcggaac ccagacatta cgccagcgtc
      421 agcaacgtct tgaagcaaaa gccaatgtgg ctggtggcat aaatgagcag ttcttcctgg
      481 atcagcttga ggcgctggga tataccggcg taacgatcga acagttccag cacctggatg
      541 caagccccga tccggaatgg ggagatcgct ggcgttattt ctggcgtgtg acgttgccgg
      601 tggatgccgg tgctcagtgg cagacatgca cggacgcctg caacacaccg atccggacgt
      661 ggggggatac ggttgcggag tgcgtgatta ataaattatg tccgtcacac accgtcgttt
      721 tattttccta tccagatgag gatgaagatg cacaggattg atacgctgac tgcggtaaaa
      781 gataagtttg gtccgggtaa gaacggattt actgacggaa atcttcgcac aggacgtctt
      841 gctacctggc tgaacagtgc catgtggaat gccattcagg aggaaatctg tggtgtcatt
      901 gagaaggccg ggatagaact gaataaagaa gaacacgacc agctatataa ggctatatta
      961 ttgctggtgg gcggtgcaat taacgaagag gcattgctga taaaaaataa cctttcggat
     1021 gtggaagaca gggatgaggc tgttgaaaac ctcggattaa aacccacggt ggataaggca
     1081 aaaaatgccg ttcagcgtga tggcgacacc atgaccggag agctgaaaat ccgtggtgtt
     1141 aatgcgctga ggattttcaa cgaagctttt ggcctgattt ttcgtcgttc ggaagagtgc
     1201 ctgcacctta ttcccaccag tgaaggtcag ggggaaaatg gcgatattgg tcccctgcgc
     1261 ccgttcacca ttaatctgcg gacgggtgaa atatccatgt cgcataaagt gtctgttggc
     1321 ggtggttcgc aggtcaatgg tgcgctgggt atcggcgttc agaacgccct ggggggaatt
     1381 caattgcttt cggggataac gatacaggta taaaacaaaa cggcgacggc attctggatg
     1441 tttatgcgaa tggacagcat gtatttcgtt tccagaatgg tgtggcgata gcgttaaaaa
     1501 atattcaggc cggaaatgct aaaaaattca cgttatccag cgccaacaac tccacgaaaa
     1561 atgcagcgtt ttatttgtgg ggtaatccat ccaggcctgt tgttgcagag cttggtgatg
     1621 attccggctg gcatttctac agccagagaa ataccgatgg tagtatcaca ttcgctgtaa
     1681 acggacaggt aattccgtta aattacggaa acttcgatgc ccgctataaa catcgaactg
     1741 agggggtaca ggatgtgcgg tatggttatg aaatgtatta caaccctggc agcaacaccg
     1801 tttcatggac gtttcgctca ccttcgggac acgggttgtc agggatatcg atatcggata
     1861 ccggccgtaa ctcagcggat aacgtcaacg gtgtgtatta ccgaccgctg caaaaactga
     1921 ttaatggcat ctggtataac gtagcgagta tttaacaatg ttgcatttaa aaaatattac
     1981 ggcaggtaat ccgaaaaccg cggaacaata tcagctgaca aaacagtatg atgtcacctg
     2041 gcttttttcg gaagacggca aaaactggta tgaagaacag aagaactttg ccagtgacac
     2101 cataaaaatg gtttacaccg gagacgggcg cgtggtgtgg gtcggtaagg atgtgacagg
     2161 cattgaaccc cgtaacgcca gtgttattga agttcctgat attaccgcca accgccgcat
     2221 taccgcgccg ggttactggt tttaccgcaa tgatgaattt gtctttgact acagactcaa
     2281 agcggaagat gagcgtgatg cccttctggc tcaggtcagt gcccggacag gggaatggga
     2341 agaagacctg ctgctggggc taatcagcga cgaagaccgg gaaaaactga aagcgtaccg
     2401 tatttacgcg aaatcgctgc aggcgatgga tttcagcgcc atcactgata aatcctcata
     2461 caacgccatt gaatggcccg tctctccgga aggttcttcc tgatttaatt tatcgcgaga
     2521 aaaactatgt ctgtagtgat atcaggtgcg ctgactgatg gcgcaggcat ccccatgtcc
     2581 ggatgccaga ttattctgaa atcccgtgta aacacctcag aagtggtgat gcgtaccagg
     2641 gctgatgtag tgaccggaaa taacggtgaa tattcgtttg aggcacaggt cggaaaatat
     2701 tgcgtgtatc tgaaacggga ctggcgcgac gagtactgtg ttggcgacat tgctgtatac
     2761 gacgactcaa agcccggcac gctgaatgac tttctgactg cccccgatga aggcgacctg
     2821 aagccggatg tcgtcaaacg ctttgaggaa atggtggcgc aggcgcagca gagcgccggg
     2881 gccgcagccg gaaacgcaca gcagacggcg caggatgtgg cggc
//
LOCUS       DADMJE010000264         2918 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.269, whole genome shotgun sequence.
ACCESSION   DADMJE010000264 DADMJE010000000
VERSION     DADMJE010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2918
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.269"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1322
                     /locus_tag="JN001_004064"
     CDS             <1..1322
                     /locus_tag="JN001_004064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415419.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HAY9055085.1"
                     /translation="LVVVFSWVFIFALYFTPYALIVGQLGSTFKDGKGGVSTWIKHTM
                     GPGLAYLAAWTYWVVHIPYLAQKPQAILIALGWAMKGDGSLIKEYSVVALQGLTLVLF
                     IFFMWVASRGMKSLKIVGSVAGIAMFVMSLLYVAMAVTAPAITEVHIATTNITWETFI
                     PHIDFTYITTISMLVFAVGGAEKISPYVNQTRNPGKEFPKGMLCLAVMVAVCAILGSL
                     AMGMMFDSRNIPDDLMTNGQYYAFQKLGEYYNMGNTLMVIYAIANTLGQVAALVFSID
                     APLKVLLGDADSKYIPASLCRTNASGTPVNGYFLTLVQVAILIMLPTLGIGDMNNLYK
                     WLLNLNSVVMPLRYLWVFVAFIAVVRLAQKYKPEYVFIRNKPLAMTVGIWCFAFTAFA
                     CLTGIFPKMEAFTAEWTFQLALNVATPFVLVGLGLIFPLLARKANSK"
     gene            complement(1323..2231)
                     /locus_tag="JN001_004065"
     CDS             complement(1323..2231)
                     /locus_tag="JN001_004065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HAY9055086.1"
                     /translation="MRMNMSDFATFFAVARNQSFRAAGDELGLSSSAISHSIKTLEQR
                     LKIRLFNRTTRSVSLTEAGSNLYERLRPAFDEIQIMLDEMNDFRLTPTGTLKINDARV
                     AARIFLMPLLVGFTREYPDIKVELTTDDSLVDIVQQGFDAGVRLSGIVEKDMISVAIG
                     PPVKLCVAATPEYFARYGKPRHPHDLLNHQCVVFRYPSGKPFHWQFAKELEIAVAGNI
                     ILDDVDAELEAVLMGAGIGYLLYEQIKEYLDTGRLECVLGDWSTERPGFQIYYPNRQY
                     MSCGLRAFLDYVKTGQISQSQRHRPQ"
     gene            2331..>2918
                     /locus_tag="JN001_004066"
     CDS             2331..>2918
                     /locus_tag="JN001_004066"
                     /EC_number="1.6.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H oxidoreductase"
                     /protein_id="HAY9055087.1"
                     /translation="MQSERIYLVWAHPRHDSLTAHIADAIHQRAMERKIQVTELDLYR
                     RNFNPVMTPEDEPDWKNMDKRYSPEVHQLYSELLEHDTLVVVFPLWWYSFPAMLKGYI
                     DRVWNNGLAYGDGHKLPFNKVRWVALVGGDKESFVQMGWEKNISDYLKNMCSYLGIED
                     ADVTFLCNTVVFDGEELHASYYQSLLSQVRDMVDAL"
BASE COUNT          738 a          621 c          728 g          831 t
ORIGIN      
        1 ggctggtggt tgttttttca tgggtgttta tctttgcgct ctatttcaca ccttatgcgc
       61 taattgttgg tcagttaggc tcgaccttca aagatgggaa gggcggggtc agtacctgga
      121 ttaaacacac gatgggaccc ggactggctt atctcgccgc gtggacctac tgggtggtgc
      181 atattcccta tctggcacaa aaaccccagg caattctgat tgcgctcggt tgggcgatga
      241 aaggcgacgg ttcgctaatc aaagaatatt cagtcgtagc gttacagggg ttaacgctgg
      301 tgctgtttat cttctttatg tgggttgctt cacgcggtat gaaatcgctg aaaatcgtcg
      361 gttctgtggc agggattgcg atgtttgtta tgtcgctcct gtatgtggcg atggcggtaa
      421 ccgcgcctgc gattactgaa gtgcatattg cgaccacaaa cattacctgg gaaacgttca
      481 ttcctcatat cgactttacc tacattacca ctatttcaat gctggttttc gcggttggcg
      541 gagcagagaa gatttctcct tacgttaatc aaacgcgcaa cccaggaaaa gaatttccaa
      601 aagggatgtt atgcctggcg gtgatggttg cggtttgtgc cattctgggc tcactggcga
      661 tggggatgat gtttgactcg cgtaatatcc cggatgactt aatgactaac ggtcaatatt
      721 acgcctttca gaagctgggc gagtattaca acatgggtaa tactttaatg gtgatttacg
      781 ccattgcgaa taccctggga caagtagctg cgctggtatt ctcgattgat gccccgctta
      841 aagtgctatt aggtgatgct gacagcaaat atattccagc cagtttatgt cgtaccaacg
      901 cttctggtac gcccgttaat ggctattttc tgaccctggt gcaggtggca attctgatta
      961 tgctgccgac tctcggcatc ggtgatatga acaatctcta taaatggctg ttgaatctta
     1021 actcggtagt gatgccgctg cgttatttat gggtatttgt tgcatttatt gcagtcgttc
     1081 gcctggcgca gaaatataaa ccagaatatg tctttattcg taataagcct ctggcaatga
     1141 ccgtcgggat ttggtgtttt gcctttaccg cctttgcctg tttgacgggg atcttcccga
     1201 aaatggaagc cttcactgca gagtggacct tccagttggc gctgaatgtt gcaacgccgt
     1261 ttgtgctggt aggattagga ctgattttcc cgctgctggc gcgtaaagcg aatagtaaat
     1321 aattattgtg gtcggtgacg ctgactctgg ctgatctgac ccgtttttac ataatcgaga
     1381 aatgcgcgca agccgcagga catatactgg cggtttggat aatagatctg gaagcctgga
     1441 cgctctgtgc tccagtctcc cagtacacat tctaaacgac cagtatcaag gtactccttg
     1501 atctgttcat agagcagata cccgatacca gcacccatca aaacggcctc cagttcagca
     1561 tcaacatcat ccagaatgat atttcctgcg acagcaattt ccagctcctt tgcaaattgc
     1621 cagtggaaag gtttgccgct gggataacga aaaacaacac attgatgatt aagcagatca
     1681 tgaggatggc ggggtttgcc atatcttgca aagtactctg gcgttgctgc tacacataat
     1741 ttcactggcg ggccgatcgc cacgctgatc atatcttttt cgacgatgcc actaagtcga
     1801 acgccagcgt caaagccctg ttggacgata tcgacaagag agtcgtcagt tgtgagctcg
     1861 actttaatat caggatattc acgtgtgaaa ccaaccagta aaggcattaa aaatatacgt
     1921 gcagctaccc gggcgtcatt gattttgagc gttcctgtcg gtgtcagacg aaaatcattc
     1981 atctcatcta acatgatctg aatttcgtcg aaagctgggc gcaatcgttc atagagatta
     2041 gaacctgctt ccgttaacga tacgcttcgg gttgtccgat tgaataagcg aattttaaga
     2101 cgttgttcca gtgttttaat actatggcta atggcggacg aggataagcc taactcatcg
     2161 cccgctgcac gaaagctttg attacgggcc acggcaaaga aagtggcaaa gtcagacata
     2221 ttcatccgca ttagtgaaaa tccttcatta actcatcctg aatcatcacg tttacaggat
     2281 tatgccgcct gcgtaaagtg cgctccagaa cttaacgtgg aggtaaaatt atgcagtctg
     2341 aacgtattta tttggtatgg gcccatcctc gtcatgattc attgaccgca catattgctg
     2401 atgcgatcca tcagcgggca atggagcgga aaatacaggt gacggaactc gatttatatc
     2461 ggcgtaattt caacccagtg atgacgccgg aagatgaacc agactggaag aatatggata
     2521 aacgttattc tccagaggtt catcagcttt attcagagct gcttgaacat gacacgttag
     2581 tggtggtttt tcctctctgg tggtacagct tcccggcaat gctaaaagga tatattgaca
     2641 gagtatggaa taatgggctg gcttatggag atgggcacaa attaccattc aataaagttc
     2701 gttgggtggc gctggttgga ggagacaaag aatcatttgt ccagatgggc tgggaaaaaa
     2761 atataagcga ttatttgaaa aatatgtgca gttatcttgg tattgaagat gccgatgtca
     2821 ctttcttgtg taatacagtg gtattcgatg gggaagaact tcatgcgagc tattatcagt
     2881 cgttattatc tcaggtacgg gatatggtag atgcacta
//
LOCUS       DADMJE010000265         2865 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.270, whole genome shotgun sequence.
ACCESSION   DADMJE010000265 DADMJE010000000
VERSION     DADMJE010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2865
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.270"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1072)
                     /locus_tag="JN001_004067"
     CDS             complement(<1..1072)
                     /locus_tag="JN001_004067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000142995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY9055088.1"
                     /translation="MAFKHYDVVRAASPSDLAEKLTHKLKEGWQPFGSPVAITPYTLM
                     QAIAAEGAVISATSDPEYYFVVVLAGQSNGMSYGEGLPLPGTYDRPDPRIKQLARRST
                     VTPGGAACKYNDIIPADHCLHDVQDMSRLNHPKADLSKGQYGTVGQGLHIAKKLLPFI
                     PANAGILLVPCCRGGSAFTTGADGTYSDASGASENSTRWGVDKPLYKDLIGRTKAALE
                     KNPKNVLFAVVWMQGEFDFGGTPANHAAQFGALVDKFRADLADMAGQCVGGSAGGVPW
                     ICGDTTYFWKQKNESTYQTVYGSYKNKTEKNIHFVPFMTDENGVNVPTNKPEEDPDIR
                     GIGYYGSKWRDSSATWTSQDRAS"
     gene            complement(1562..1638)
                     /locus_tag="JN001_004068"
     tRNA            complement(1562..1638)
                     /locus_tag="JN001_004068"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1602..1604),aa:Arg,seq:tct)
     gene            complement(1652..1728)
                     /locus_tag="JN001_004069"
     tRNA            complement(1652..1728)
                     /locus_tag="JN001_004069"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1692..1694),aa:Arg,seq:tcg)
     gene            complement(1736..1811)
                     /locus_tag="JN001_004070"
     tRNA            complement(1736..1811)
                     /locus_tag="JN001_004070"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1776..1778),aa:Ile,seq:cat)
     gene            complement(1852..2817)
                     /locus_tag="JN001_004071"
                     /pseudo
     CDS             complement(1852..2817)
                     /locus_tag="JN001_004071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001403604.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific DNA-methyltransferase"
BASE COUNT          644 a          851 c          693 g          677 t
ORIGIN      
        1 ggctcgccct gtcctgtgac gtccaggtgg ctgagctgtc acgccatttc gaaccgtaat
       61 aaccgatacc ccgaatgtcc gggtcttctt ccggtttgtt cgtcggcaca ttcaccccgt
      121 tctcatcggt catgaacggt acgaaatgga tattcttttc cgttttattt ttatagctgc
      181 cgtacaccgt ctggtacgtg gattcgttct tctgcttcca gaaatacgtc gtgtccccgc
      241 atatccaggg aacaccgcca gcagagccac cgacgcactg gcctgccata tccgccaggt
      301 ctgcacggaa tttatcaacc agcgcaccaa actgtgcggc atgatttgcc ggcgtaccgc
      361 caaaatcaaa ttccccctgc atccacacca cggcaaacag cacatttttc gggttcttct
      421 ccagtgccgc ttttgttcga ccgataaggt ccttatacag cggcttgtcc acaccccagc
      481 gggttgaatt ctccgaggca ccactcgcgt cactgtatgt gccatcagct ccggtggtga
      541 acgctgaacc accacgacag cacggaacca gcagaatgcc cgcattcgcc ggtataaacg
      601 gcagcagttt tttggcgata tgcagcccct gccccacggt tccgtactgc ccctttgaca
      661 ggtccgcttt cggatggtta agacggctca tgtcctgcac atcatgcaga caatggtccg
      721 ccggaatgat gtcgttatat ttgcatgctg caccgcccgg tgtcaccgta ctgcgacgcg
      781 ccagttgctt aatacgcggg tccggacggt catatgtccc cggcagcgga aggccttcac
      841 catacgacat gccgtttgac tgccctgcca gaaccacaac aaagtaatac tccgggtcgc
      901 tggtggcgct gattactgca ccttctgctg caatcgcctg catcagagta taaggggtta
      961 tggccaccgg actaccaaac ggctgccagc cctctttcag tttatgtgtc agcttttccg
     1021 caagatctga cggcgacgcc gccctgacaa catcatagtg tttaaaagcc atgaatcctc
     1081 ccggccggga taatattgtg agtaaaatga ggagcgggct gaagtccgga agttacagga
     1141 caatggcaga agagagacga cagcccgcaa ttcgaaaaag accgcgcagt tgcgcagagt
     1201 gactactatg gggtattatt cgccagctga aatattactt cacgttttat tgtttattcc
     1261 ttgccgcccg cgtctcccag cgcgggcttt ttttgcccac aagaaagccc ctccggagag
     1321 gggctggaga gtggcgctat gtgccattgc atggtgccgg gtgcctcccg gtgaattcag
     1381 taccagcacc tgaatccgcg attatcccat atacctactc gctgattgcc cctccgcaca
     1441 gggggattca ccatgccagt ttcttttaac aaactccccg caaaccagac aacagtcaac
     1501 cgtctgaatt gtgagacatt taaaaaaaaa gcccgcaaaa gcgagccagg gaaaataagt
     1561 gtggcgcgtt gtactggatt cgaaccagtg accgattgct tagaaggcaa ttgctctgtc
     1621 cggctgagct aacaacgcat gatgcagata atggaccgcc atcggggact tgaaccccgc
     1681 gcagccagct tcgaaggctg gcgctctttc ctgatgagct aatggcggta tgtgatggtg
     1741 gcccttgctg gatttgaacc agcgacctgg cgattatgag tcgctcgctc tcaccactga
     1801 gctaaagggc cgggagccgc ataataacga cgcgtaatta attcttcaat atcatccgtt
     1861 ctggctgact aaatcctgta cttcccgaac cgtctgctca aaacgttcag tctccagctc
     1921 aacgccaatt gcacgacgcc cgagcgccag tgccgctttc actgtcgaac ccgaccccat
     1981 gaaaaaatct gcaatcaggt cacccggacg actgctagcg ctgattatct gctgcagcat
     2041 ttctgccggt ttttcgcacg gatgtttccc gggatagaac tgcaccggtt tatgcgtcca
     2101 cacatcggta tacggcacct gcaccgtcac gccaaaatac cgccgcagat gtttatattc
     2161 actcagcagc tccgcatact gccggttcag tgaggtatac gtatccacca gctggtggtg
     2221 gagcttttcc agttcaccac gccgatgctt ctcttctgcc acccgggcaa acagcgcctg
     2281 taatttcaga taatcgcttt cattcggcaa ctgccactga ctggcactga accagtgcga
     2341 caccatgttt ttctttcctg tggcatctgc aatctgtttt gccgttatcc ccagggcagc
     2401 tcgcgcatca cgaaagtaag aaatcagcgg ggccatcaca tgctgtttca gtgcactgcc
     2461 cttcgcctca tagccatcat ctttcgggcg gtacggcccc tgataatgtt ccgcgaacag
     2521 aatgcgctct gtggcgggga aatacgcccg caggctttcc ttgttgcatc cgttccagcg
     2581 tccggacggc ttcgctcaga taatatggtt cagcacactg aagcgttcac gcatcatgat
     2641 ttcgatatca gatgccaggc gatgaccaca gaacaggtaa agacttccgg caggtttcag
     2701 cacccgccag aactgcgcca gacactgctc cagccacttc aggtaatcat cgtcgccctt
     2761 ccactggtta tcccagccct caggcttcac tttaaagtac ggcgggtccg tgactatcag
     2821 gtcaacagaa ttttcgggta acgaccagat aaattccagg cagtc
//
LOCUS       DADMJE010000266         2839 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.271, whole genome shotgun sequence.
ACCESSION   DADMJE010000266 DADMJE010000000
VERSION     DADMJE010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2839)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2839)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2839
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.271"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..134
                     /locus_tag="JN001_004072"
                     /pseudo
     CDS             1..134
                     /locus_tag="JN001_004072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309413.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
     gene            384..1250
                     /gene="ospB"
                     /locus_tag="JN001_004073"
     CDS             384..1250
                     /gene="ospB"
                     /locus_tag="JN001_004073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspB"
                     /protein_id="HAY9055089.1"
                     /translation="MNLDGVRPYCRTVNKKNESISDIAFAHIIKRVKNSSCTHPKAAL
                     VFLGEKGFCDSNDVLSIMGQQIPRVFKNKMLYDYVFKNEKSKNDFLKMAESWLPQSEP
                     IVINNDDDALNAAAYFSVKKAKIKTVNDTDFKEYNKVYILGHGSPGSHQLGLGSELID
                     VQTIISRMKDCGILNVKDIRFTSCGSADKVAPKNFNNAPAESLSCILNSLPFFKEKES
                     LLEQIKKHLENDESLSDGLKISGYHGYGVHYGQELFPYSHYRSTSIPADPEHTVKRSS
                     QKKTFIINKELD"
     gene            1580..2320
                     /locus_tag="JN001_004074"
     CDS             1580..2320
                     /locus_tag="JN001_004074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HAY9055090.1"
                     /translation="MKTKNFLLFCIATNMIFIPSANALKAEGFLTQQTSPDSLSILPP
                     PPAEDSVVFQADKAHYEFGRSLRDANRVRLASEDAYYENFGLAFSDAYGMDISRENTP
                     ILYQLLTQVLQDSHDYAVRNAKEYYKRVRPFVIYKDATCTPDKDENMAITGSYPSGHA
                     SFGWAVALILAEINPQRKAEILRRGYEFGESRVICGAHWQSDVEAGRLMGASVVAVLH
                     NTPEFTKSLSEAKKEFEELNTPTNELTP"
     gene            complement(2680..>2839)
                     /locus_tag="JN001_004075"
     CDS             complement(2680..>2839)
                     /locus_tag="JN001_004075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HAY9055091.1"
                     /translation="LEYFINNGLVDVNKKFQKANSGDTMLDNAMKSKDSKMIDFFIKK
                     WSGIRQTI"
BASE COUNT          929 a          517 c          526 g          867 t
ORIGIN      
        1 cggtaagaga agttcatcat acttggcgca gttacgcgat gtttctgcta gaggtgatgc
       61 cgtaaagaac ggcagaacat taccggaaca agatagcggt ctacctgcac tggtatcaga
      121 cccggggctt ccccggatga tctccacggt actttaggta ctgtgtctat attatgtagg
      181 taggatcaat taactttgta gttgaaattc tttcattgaa ataatgaata aaaaagacaa
      241 accgcattaa acaatgccag aatataattg catttttgtt ccgttttttt aaatcatagt
      301 atacaaagaa gcttgcatac tatatgaaaa tataacaccc tttactatga tgtttataaa
      361 acaatatatg gagtcatgta ggtatgaatt tagatggtgt tagaccatac tgtagaacag
      421 tcaataaaaa gaatgaaagc atatcagata ttgcatttgc acatataata aaaagggtaa
      481 aaaattcatc atgtactcac ccaaaagcag cattggtttt tttaggagag aaaggttttt
      541 gtgatagcaa tgatgttcta tctattatgg gacaacaaat accaagagta tttaagaaca
      601 agatgttata tgattatgtt tttaaaaatg aaaaaagtaa aaatgatttt ctaaaaatgg
      661 ctgaatcatg gctaccacag agtgaaccaa tagtaataaa taatgatgat gacgcattga
      721 atgctgctgc ttatttttct gtaaaaaaag cgaaaataaa aacagtaaac gatactgatt
      781 ttaaagagta taataaggtt tatattcttg ggcacggtag tcctggttct catcaattag
      841 gccttggttc ggaacttatt gatgtacaaa caatcatttc aagaatgaaa gactgtggta
      901 ttctaaatgt gaaagatatc cgttttactt catgcggctc cgctgataaa gtggctccta
      961 aaaattttaa caatgcccct gctgaaagtc tttcttgtat ccttaactct ctgccttttt
     1021 ttaaggaaaa agaatctttg ctagagcaga taaaaaaaca ccttgaaaac gatgagtcat
     1081 tgagtgatgg tctaaaaata tccggctatc atggatatgg agttcactat ggtcaagagc
     1141 tttttcccta ctcacattat cgttcaactt caattcctgc tgatccggag catacagtaa
     1201 aaagaagctc tcagaaaaag acttttatta ttaataaaga actggattag tataaaattt
     1261 ttaacctata gttaattgtt tgcatttaag atgaagttat ttttttcttt agtagaaaag
     1321 tgcttcccta tgagggaaaa tcacaaatca tcataataca gagacaaaac gatacgaaca
     1381 aatagataaa aaacatcatt cttttactac attatttttc gtgaatatga aaaataatgt
     1441 tattacttta atataagact attttttgtt tttccatcac tctgttcaaa tttttccgca
     1501 tgacttgtgt tttttgtaac acagctcgtt ttttacagct gaccaaaatc atcaattaat
     1561 tatgctaagg aaataaatta tgaaaaccaa aaactttctt cttttttgta ttgctacaaa
     1621 tatgattttt atcccctcag caaatgctct gaaggcagaa ggttttctca ctcaacaaac
     1681 ttcaccagac agtttgtcaa tacttccgcc gcctccggca gaggattcag tagtatttca
     1741 ggctgacaaa gctcattatg aattcggccg ctcgctccgg gatgctaatc gtgtacgtct
     1801 cgctagcgaa gatgcatact acgagaattt tggtcttgca ttttcagatg cttatggcat
     1861 ggatatttca agggaaaata ccccaatctt atatcagttg ttaacacaag tactacagga
     1921 tagccatgat tacgccgtgc gtaacgccaa agaatattat aaaagagttc gtccattcgt
     1981 tatttataaa gacgcaacct gtacacctga taaagatgag aacatggcta tcactggctc
     2041 ttatccctct ggtcatgcat cctttggttg ggcagtagca ctgatacttg cggagattaa
     2101 tcctcaacgt aaagcggaaa tacttcgacg tggatatgag tttggagaaa gtcgggtcat
     2161 ctgcggtgcg cattggcaaa gcgatgtaga ggctgggcgt ttaatgggag catcggttgt
     2221 tgcagtactt cataatacac ctgaatttac caaaagcctt agcgaagcca aaaaagagtt
     2281 tgaagaatta aatactccta ccaatgaact gaccccataa agctggacag cctgtatcag
     2341 gctatggagg gcccatagac aaatctaccc tatatgagca taggaggagt ctatgggcac
     2401 accacgtttt acccctgaat ttaagggatt actggaaagg ctgggacata tccctccggc
     2461 agaagcagaa aaagcttatt atgctgccat cggaaacgat gatctggcaa cctgagttca
     2521 cagataaaac attctctagg aaactcgggg cggttccgtt caccacatgc aatgtggtgt
     2581 tgcaggggaa cggtctgcac catcccctat gtcgatcaat ataacagaaa tgacaacttc
     2641 agattcaggg cacaacctaa atatatttta ggtcacctct caaatcgttt gcctgatacc
     2701 gctccatttt ttaataaaaa aatcaatcat ttttgaatct ttgcttttca ttgcattgtc
     2761 aagcatagtg tccccactat ttgctttttg aaattttttg tttacatcaa ccaatccatt
     2821 attgataaaa tattctagc
//
LOCUS       DADMJE010000267         2787 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.272, whole genome shotgun sequence.
ACCESSION   DADMJE010000267 DADMJE010000000
VERSION     DADMJE010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2787)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2787)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2787
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.272"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(924..1595)
                     /gene="queE"
                     /locus_tag="JN001_004076"
     CDS             complement(924..1595)
                     /gene="queE"
                     /locus_tag="JN001_004076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001199960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="7-carboxy-7-deazaguanine synthase QueE"
                     /protein_id="HAY9055092.1"
                     /translation="MQYPINEMFQTLQGEGYFTGVPAIFIRLQGCPVGCAWCDTKHTW
                     EKLEDREVSLFSILAKTKESDKWGAASSEDLLAVIGRQGYTARHVVITGGEPCIHDLL
                     PLTDLLEKNGFSCQIETSGTHEVRCTPNTWVTVSPKLNMRGGYDVLSQALERANEIKH
                     PVGRVRDIEALDELLATLTDDKPRVIALQPISQKDDATRLCIETCIARNWRLSMQTHK
                     YLNIA"
     gene            1734..1874
                     /locus_tag="JN001_004077"
     CDS             1734..1874
                     /locus_tag="JN001_004077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055093.1"
                     /translation="MSEENKENGFNHVKTFTKIIFIFSVLVFNDNESKITDAAVNLFI
                     QI"
     gene            1888..2760
                     /locus_tag="JN001_004078"
                     /pseudo
     CDS             1888..2760
                     /locus_tag="JN001_004078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417258.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YgcG family protein"
BASE COUNT          857 a          573 c          517 g          840 t
ORIGIN      
        1 tttaactagt tcggtttatc cctgttttta caaggaatat taactacact cgatgtcttt
       61 agaataaaag acaatacgaa tcgcacttta tcaattttca cttaaagtat gaactggata
      121 tctttattca taagaactat tcatcaacag cgtatagagg cggttatgta aaaccactca
      181 ttagcctcaa aacaaagaca aacttccaga tttattactt aaccaatgaa taacaagctt
      241 aaaaaatata ctgttattct aaagaaaaaa ttaacaggca ttaattcaat attaaaaaaa
      301 taatagatta aaatttctta acgatttaag aatcatacaa ataacacttt gattaaattt
      361 aattttttgt atcgataatt gtgaacctct ctggcatgga gaactatttt gaacatgagg
      421 tgttacgtgg atatgttgct tattacaagt actgctaata taaaaacttg agaaagagat
      481 aacgggttat atggtggttt atccccgctg gcgcgggaaa ctcccagctc ttgcccgcct
      541 caaagtgttg taactcggtt tatccccgct ggcgcgggga actctgtaaa cataacctat
      601 tattaattaa tgatttttta agccagtaac aatctaccaa ctttacagta tcacacaaac
      661 aacacatcca ttatgttaaa gagtacttaa ttcattgatt aaaaaggtaa atatttaaaa
      721 taactctata caaattaaaa tctaccaaac tttaccgcaa taattttcac tccagcgaaa
      781 aattaatgcc acagaatttg tagataatgc taatgattag ccctggatgg gtaaaatgga
      841 ggagttttca gaggcgacaa acaatataaa tgagtagaag tctttacagg ttccacccat
      901 ttataacgct tataaatgtt taatcaggca atatttagat atttatgtgt ttgcatcgac
      961 aaacgccaat tacgcgcaat gcaggtttca atgcacaaac gtgtggcatc atccttttgg
     1021 ctaatcggct gcagtgcaat gactcgcggt ttatcatcgg tcagcgttgc caatagttca
     1081 tcgagtgctt caatatcgcg tacgcgcccc actggatgct tgatttcgtt ggctcgctcc
     1141 agtgcctgtg acaacacgtc atagccgccg cgcatgttca gctttggcga tacggtaacc
     1201 caggtattcg gtgtgcagcg tacttcatga gttccactgg tttcgatctg gcagctaaaa
     1261 ccgttctttt cgagcaggtc agtcagtggc agcaaatcat gaatgcaagg ctcaccaccc
     1321 gtaatcacca catgccgcgc ggtatatccc tgccgaccaa tgacagccag caaatcttca
     1381 ctgctcgccg ccccccactt atcactctct ttggtcttcg ccagaatgct gaaaagggag
     1441 acttcccgat cctcaagctt ttcccaggtg tgtttggtgt cgcaccaggc acagccaacc
     1501 gggcatccct gtaaacgaat aaaaatggcg gggacgccgg taaagtaacc ctcaccttgc
     1561 agggtctgga acatctcgtt aatcgggtac tgcatagcat tctctgtgaa gtggataatt
     1621 gttaattatt gcagatcctg ccgcaacaat catgccttat taacattctg ttacatgcag
     1681 atttaaagaa aaatgcgaaa catatcgtta ataattaaag ggagtaacgt attatgtcag
     1741 aagaaaataa agaaaatgga tttaatcatg tcaaaacatt caccaaaatt atatttattt
     1801 tttctgtatt agtttttaat gataacgagt ctaaaattac cgatgccgcc gtcaatttat
     1861 ttatccagat ttaatgagaa atttataatg cgctatttca tactaatgtt cactttcgta
     1921 tgttcctttg ttgcagccca accaactatt gtcccacaat tacagtaaca agttacggat
     1981 cttacgagta gcttaaactc acaagaaaag aaagaactga cgcacaagtt agaatctatt
     2041 ttcaataata cccaagtgca aattgctgta ttaattgttc ccacaaccaa agacgagaca
     2101 attgaacaat atgctacaag agtttttgac aattggcgtt taggagatgc caaacgtaat
     2161 gatgggatac tgatcattgt tgcctggtca gatcgtactg tccgcatcca ggtaggttat
     2221 gggctggaag aaaaggtaac cgatgctctg gctggagata tcatccgtag caacatgata
     2281 cccgcattta aacaacaaaa atttgctcag ggattagagc tagctataaa cgctttgaat
     2341 aaccaactca cttcacaaca ccaatatccg actaatcctt cagaaagtga atcagcgtct
     2401 tccagtgatc attattactt tgctattttt tgggtatttg cagtgatgtt cttccctttc
     2461 tggttttttc atcaaggcag taatttttgt cgcgcatgta aaagtggagt ctgtatttca
     2521 gcaatctatc ttttagattt attcctgttc tccgataaaa ttttttccat tgctgtattt
     2581 tccttctttt ttactttcac catatttatg gtctttacct gtttatgtgt acttcagaaa
     2641 agagcatcag gtaaaagtta tcattcagac aacagcggtt ccggtggagg ctcaagtggc
     2701 ggcggattta gcggcggtgg cggttcttct ggaggtggcg gcgcatccgg ccgctggtaa
     2761 ctcaaccata aaaaatgcca tcccgga
//
LOCUS       DADMJE010000268         2782 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.273, whole genome shotgun sequence.
ACCESSION   DADMJE010000268 DADMJE010000000
VERSION     DADMJE010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2782)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.273"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>2782
                     /locus_tag="JN001_004079"
     CDS             <1..>2782
                     /locus_tag="JN001_004079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY9055094.1"
                     /translation="KLESLPTAPTYNLKNGSKNNVGAALAVLDENTLQWDQTKGKYSA
                     AHGTSSPTASVITDVADGTISASSKDAVNGSQLKATNDDVEANTANIATNTSNIATNT
                     ANIATNTTNITNLTDSVGDLQADALLWNETKKAFSAAHGQDTTSKITNVKDADLTADS
                     TDAVNGSQLKTTNDAVATNTTNIANNTSNIATNTTNISNLTETVTNLGEDALKWDKDN
                     GVFTAAHGTETTSKITNVKDGDLTTGSTDAVNGSQLKTTNDAVATNTTNIATNTTNIS
                     NLTETVTNLGEDALKWDKDNGVFTAAHGNNTASKITNILDGTVTATSSDAINGSQLYD
                     LSSNIATYFGGNASVNTDGVFTGPTYKIGETNYYNVGDALAAINSSFSTSLGDALLWD
                     ATAGKFSAKHGTNGDASVITDVADGEISDSSSDAVNGSQLHGVSSYVVDALGGGAEVN
                     ADGTITAPTYTIANADYDNVGDALNAIDTTLDDALLWDADAGENGAFSAAHGKDKTAS
                     VITNVANGAISAASRDAINGSQLYTTNKYIADALDGDAEVNADGTITAPTYTIANAEY
                     NNVGDALDALDDNALLWDETANGGAGAYNASHDGKASIITNVANGSISEDSTDAVNGS
                     QLNATNMMIEQNTQIINQLAGNTDATYIQENGAGINYVRTNDDGLAFNDASAQGVGAT
                     AIGYNSVAKGDSSVAIGQGSYSDVDTGIALGSSSVSSRVIAKGSRDTSITENGVVIGY
                     DTTDGELLGALSIGDDGKYRQIINVADGSEAHDAVTVRQLQNAIGAVATTPTKYFHAN
                     STEEDSLAVGTDSLAMGAKTIVNGDKGIGIGYGAYVDANALNGIAIGSNAQVIHVNSI
                     AIGNGSTTTRGAQTNYTAYNMDAPQNSVGEFSVGSADGQRQITNVAAGSADTDAVNVG
                     QLKVTDERVAQNT"
BASE COUNT          780 a          723 c          684 g          595 t
ORIGIN      
        1 gtaagttgga gtcattacct acagcaccaa cctacaattt aaaaaatggt agcaaaaata
       61 acgtaggggc tgcgctcgct gtacttgatg aaaacaccct gcaatgggac caaaccaaag
      121 gcaaatacag cgctgctcat ggtactagta gcccaactgc cagcgtaatc accgatgttg
      181 cggatggcac gatttcagcc tccagtaagg atgcggttaa cggttcccaa ctgaaagcta
      241 ccaatgacga tgtcgaagcc aacaccgcca atatcgctac taataccagc aacattgcca
      301 cgaatacggc aaatattgcc accaatacca ccaatatcac caacctgacg gattccgttg
      361 gtgaccttca ggctgatgcc ctgctctgga acgaaactaa aaaggcattc agtgcagctc
      421 acggccagga taccaccagc aaaatcacca acgttaaaga tgccgacctg acggctgaca
      481 gcactgatgc tgttaacggc tctcagctga aaaccaccaa cgatgctgtg gcgacgaata
      541 ccaccaatat cgccaataac acttccaata ttgccactaa caccaccaac atctctaatc
      601 tgactgagac ggtgactaat cttggtgagg atgcgctgaa atgggataag gacaatggtg
      661 tattcacggc agctcatggc accgagacca ccagcaaaat caccaacgtt aaagatggcg
      721 acctgacgac tggcagcacc gatgccgtta acggctctca gctgaaaacc accaacgatg
      781 ccgtggcgac gaataccacc aatatcgcca ctaacaccac caacatctct aatctgactg
      841 agacggtgac taatcttggt gaggatgcgc tgaaatggga taaggacaat ggtgtcttca
      901 ctgcagctca tggcaacaat accgccagca aaatcaccaa tatcctggac ggcacagtca
      961 ctgcaaccag ttccgatgcc attaacggta gccagcttta tgacttaagc agcaatatcg
     1021 ccacctactt cggcggcaat gcttctgtga atactgacgg tgtgtttacc ggtccaacct
     1081 acaaaatcgg tgaaacaaat tattataacg tcggcgatgc actggctgcg attaactcct
     1141 catttagcac gtctctcggc gatgctctgc tttgggatgc caccgcaggt aaattcagtg
     1201 ccaaacacgg tactaatggt gacgcaagcg tgatcactga tgtcgcagat ggtgaaattt
     1261 cagactccag ttctgacgca gtaaacggct cacaactcca cggcgtgagc agttatgttg
     1321 ttgatgcgct ggggggtggt gccgaagtca atgcagacgg caccatcact gcgccgacgt
     1381 acaccattgc taatgctgat tacgataatg tcggtgatgc cctgaatgct atcgatacca
     1441 ctcttgacga cgctctgctc tgggatgcgg acgccggtga aaatggtgca tttagcgccg
     1501 ctcacggaaa agataaaact gccagtgtaa tcactaacgt cgctaacggt gcaatctctg
     1561 ctgccagcag agacgcgatt aacggctcac aactctatac caccaataag tacatcgctg
     1621 atgcgctgga tggtgacgca gaagtcaacg ctgacggcac catcaccgca ccgacttaca
     1681 ccattgcgaa cgccgagtac aacaacgtcg gtgacgctct ggatgcgctt gatgataacg
     1741 ccctgctgtg ggatgagact gccaatggcg gtgctggagc ctacaatgcc agccatgacg
     1801 gtaaagccag catcatcact aatgtcgcta atggcagtat tagtgaggac agtaccgatg
     1861 cagtgaacgg ttctcagttg aatgcgacga atatgatgat tgagcagaac acccaaatta
     1921 tcaatcagct cgctggtaac accgacgcaa cctatatcca agaaaacggt gcgggtatta
     1981 actatgtgcg tactaacgac gacggcttag cgttcaacga cgccagcgca cagggtgttg
     2041 gcgctacagc tataggttat aactctgtcg ccaaaggcga tagcagcgta gctattggtc
     2101 agggcagcta cagcgacgtt gatacgggta tcgccctagg tagcagctct gtttccagcc
     2161 gagtgattgc caaaggctcc cgtgacacca gcataacgga aaatggcgtt gttattggtt
     2221 acgacaccac ggatggcgaa ctgctcggtg cattgtctat cggtgatgac ggtaaatatc
     2281 gtcaaatcat caacgtagcc gatggttccg aagcccatga cgccgttacg gttcgtcaat
     2341 tgcagaatgc gattggtgcg gtcgcaacca cgccgactaa atacttccac gctaattcaa
     2401 cggaagaaga ttcactggca gtgggaactg actcgctggc aatgggtgcg aaaaccatcg
     2461 tgaatggcga taaaggtatt ggtatcggtt atggtgccta cgtggacgcg aatgcactta
     2521 acggcattgc cattggtagc aatgcgcaag tcattcatgt caacagtatt gcgataggta
     2581 atggttctac gaccactcgt ggcgctcaaa ccaattatac cgcctacaac atggacgcac
     2641 cgcagaactc tgtcggtgaa ttctcagtcg gtagtgcgga tggtcaacgt cagatcacaa
     2701 acgtcgcagc tggttcagcg gataccgatg cggttaacgt gggtcagttg aaagtcactg
     2761 atgagcgcgt agcgcaaaat ac
//
LOCUS       DADMJE010000269         2750 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.274, whole genome shotgun sequence.
ACCESSION   DADMJE010000269 DADMJE010000000
VERSION     DADMJE010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2750)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2750)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2750
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.274"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..2192
                     /locus_tag="JN001_004080"
     CDS             <1..2192
                     /locus_tag="JN001_004080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="exonuclease"
                     /protein_id="HAY9055095.1"
                     /translation="RYEKGGKDGITMTFIGPSPSVQDKSASTDNTNINGEDMTEIEES
                     MLLPVSGQELPIRWLAQHGSEKPVTHVSRDELQALHIARAEELPAVTALAISHKTSLL
                     DSLEIRDLHKLVRDTDKVFPNPGNSDLGLITAFFEAYLDADYTVRGLLTKEWMKGNRV
                     SRITRTASGANAGGGNKTDRNPNLVHTLDTLDVEIAAATLPMDFNIYEIPGSVYRRAK
                     EVVLKKESPFKEWSAALRAPPGILDYSRAAIFALIRSAHPEFYHYPGRLQGYINAYLT
                     ETDHENPSKETLTATRHTPEKDILEEINREVVTERETEEEKPQPSDAMAGEQATTETM
                     EPDTTEHCQNAQSLDAQSQVSSANQVKVTADEVNKIMQAANISQPDADKLLAVSRGEF
                     VEGISDPNDPKWVKGIQTRDSVNQNQHESERNDQKAEQNSPNALQNEPETKQSEPVAQ
                     QEPEKVCTACGQSGGGNYPDCGAVMDDATYQKTFDEENQVEVQENDPEEMEGAEHPHK
                     ENAGSAQDHASDSKTGETADPLITVNGHHEITSTSRTCDHLMIDLETMGKNPDAPIIS
                     IGAIFFDPQTGDMGPEFSKTIDLETAGGVIDRDTIKWWLKQSREAQSAIMTDEIPLDD
                     ALLQLREFIDENSGEFFVQVWGNGANFDNTILRRSYERQGIPCPWRYYNDRDVRTIVE
                     LGKAIDFDARTAIPFEGERHNALDDARYQAKYVSAIWQKLIPSQADF"
     gene            2251..2454
                     /locus_tag="JN001_004081"
     CDS             2251..2454
                     /locus_tag="JN001_004081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4224 domain-containing protein"
                     /protein_id="HAY9055096.1"
                     /translation="MSSLFLTEDELLILTGCKYASHQRKWLMENELPFYTNRSGKPIV
                     SRDLFTCNKTLPPREVEPNFGAI"
BASE COUNT          841 a          665 c          652 g          592 t
ORIGIN      
        1 accgctatga aaaaggcggg aaagatggca tcacaatgac atttatcggc ccttccccct
       61 ctgttcagga caaatcagcc agcactgata ataccaacat caacggcgaa gacatgactg
      121 agattgagga gagcatgctt ctacctgtct ccggtcagga actgcccatt cgttggcttg
      181 ctcaacacgg cagcgaaaaa ccagtaacgc acgtttcacg cgacgaactc caggcattac
      241 acattgcacg ggctgaagaa ctaccggctg ttactgccct ggctatttcg cataaaacca
      301 gtctgctcga ctcgctggag attcgcgacc tccacaaact ggttcgtgac actgacaaag
      361 ttttccctaa tcctggtaat tcagacctgg gactaataac tgcttttttc gaagcatact
      421 tggacgctga ctacactgtt cggggcctgc tgacaaaaga gtggatgaaa ggaaatcgtg
      481 tttcacgcat cacccgcacg gcttccggtg ctaatgctgg tggtgggaac aaaaccgatc
      541 gcaatccgaa tttagtacac accctcgaca cactggatgt ggagattgca gcagccacac
      601 ttccgatgga ttttaatatt tatgaaattc cgggcagcgt ttatcgtcgc gcaaaagaag
      661 tagtcctgaa aaaagaaagt ccgttcaaag aatggtccgc agcacttcgt gcacccccgg
      721 gtattctgga ctattcccgc gccgctattt ttgcacttat ccgaagcgca caccctgaat
      781 tttatcacta cccgggacgc cttcaggggt atatcaacgc ctatttgacg gaaactgatc
      841 acgagaaccc cagcaaggaa actctcacag ctacccggca tacgccggaa aaagatatcc
      901 tggaagaaat taaccgcgag gtggttactg agcgtgaaac agaagaagaa aaaccacaac
      961 catctgacgc aatggcaggt gaacaggcaa caactgaaac aatggaaccg gatacaactg
     1021 aacattgcca gaacgcgcag tcgctggatg ctcagtcgca ggtgagttcc gctaaccaag
     1081 taaaagtcac cgctgacgaa gtaaacaaaa ttatgcaggc agccaatatc agccagcctg
     1141 acgccgataa gttacttgct gtatcgcgtg gtgaatttgt tgaggggatt agcgacccta
     1201 atgatccgaa atgggtcaag gggatccaga ctcgcgattc tgtgaaccag aaccagcatg
     1261 aatcggaacg gaacgaccaa aaagcggaac aaaacagccc aaatgcgtta caaaacgagc
     1321 cagaaacgaa acaatccgaa ccagtagcgc aacaggaacc ggaaaaagtc tgcaccgcct
     1381 gcggtcagag cggtggcggc aactaccctg attgtggcgc ggtgatggac gacgcaacat
     1441 accagaaaac attcgatgaa gagaatcagg ttgaagttca ggaaaatgat ccggaggaaa
     1501 tggaaggcgc tgaacatcca cacaaggaga atgctggcag cgctcaggac cacgccagcg
     1561 atagtaaaac tggcgagacg gcagatccct taattacggt gaatggtcat cacgaaatca
     1621 catccaccag caggacgtgt gaccatctaa tgatcgacct tgaaaccatg ggaaaaaatc
     1681 ctgatgcccc gatcatctca ataggtgcaa tatttttcga tccgcaaacc ggagatatgg
     1741 gacccgaatt tagtaagact atcgatctgg aaactgctgg cggagtcatt gatcgggaca
     1801 ccattaaatg gtggcttaag caatcacgcg aagcgcaatc tgccattatg accgatgaaa
     1861 tcccgttaga tgatgcactg ttacaattgc gggaatttat cgacgaaaac tccggtgaat
     1921 tttttgttca ggtctgggga aatggagcca acttcgacaa cacgattttg cgccgttcat
     1981 acgaacggca ggggatcccc tgcccgtggc gttactacaa cgatcgcgat gtacgcacaa
     2041 tcgttgagct ggggaaagcc atagacttcg atgccagaac ggctattcca ttcgaaggtg
     2101 agcgccataa tgcacttgat gacgctcgtt accaggcaaa atacgtttca gctatctggc
     2161 aaaaactgat cccgagtcag gctgattttt aatgttcaac cctaattgcc gctaaccgta
     2221 tatagttagc ggcggttatg agatatagct atgagcagct tatttttaac cgaagatgaa
     2281 ttgctaatat taacgggctg caaatatgca agccaccagc gaaaatggtt aatggaaaac
     2341 gagcttccgt tctataccaa tcgtagtggc aaaccgattg tcagccggga tctatttacc
     2401 tgcaataaaa ctttaccacc acgcgaggta gagccgaatt ttggtgcgat ctgatgggaa
     2461 gacgaaggaa aaatcctgag cacgaaaaat tacctccaaa tgtataccca aataaatata
     2521 gttatgtatg gaaaccaaca tccagcgaat ctgtaacact aaccgccatc aaggatggtt
     2581 tagctgcttt atggaaaaag tatgaggaaa ctgtaaataa tcgcgatcgt gcaatgacat
     2641 tcggtcgctt gtgggaaaaa ttcctcgcca gcgcctatta cagtgacctc agtccaagaa
     2701 cacaaaaaga ttatctgcaa catcaaaaaa gttgcttgcc gtattcggta
//
LOCUS       DADMJE010000270         2741 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.275, whole genome shotgun sequence.
ACCESSION   DADMJE010000270 DADMJE010000000
VERSION     DADMJE010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2741)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2741)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2741
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.275"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JN001_004082"
     CDS             complement(230..2608)
                     /gene="ppsA"
                     /locus_tag="JN001_004082"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000069371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HAY9055097.1"
                     /translation="MSNNGSSPLVLWYNQLGMNDVDRVGGKNASLGEMITNLSGMGVS
                     VPNGFATTADAFNQFLDQSGVNQRIYELLDKTDIDDVTQLAKAGAQIRQWIIDTPFQP
                     ELENAIREAYAQLSADDENASFAVRSSATAEDMPDASFAGQQETFLNVQGFDAVLVAV
                     KHVFASLFNGRAISYRVHQGYDHRGVALSAGVQRMVRSDLASSGVMFSIDTESGFDQV
                     VFITSAWGLGEMVVQGAVNPDEFYVHKPTLAANRPAIVRRTMGSKKIRMVYAPTQEHG
                     KQVKIEDVPQEQRDIFSLTNEEVQELAKQAVQIEKHYGRPMDIEWAKDGHTGKLFIVQ
                     ARPETVRSRGQVMERYTLHSQGKIIAEGRAIGHRIGAGPVKVIHDISEMNRIEPGDVL
                     VTDMTDPDWEPIMKKASAIVTNRGGRTCHAAIIARELGIPAVVGCGDATERMKDGENV
                     TVSCAEGDTGYVYAELLEFSVKSSSVETMPDLPLKVMMNVGNPDRAFDFACLPNEGVG
                     LARLEFIINRMIGVHPRALLEFDDQEPQLQNEIREMMKGFDSPREFYVGRLTEGIATL
                     GAAFYPKRVIVRLSDFKSNEYANLVGGERYEPDEENPMLGFRGAGRYVSDSFRDCFAL
                     ECEAVKRVRNDMGLTNVEIMIPFVRTVDQAKAVVEELARQGLKRGENGLKIIMMCEIP
                     SNALLAEQFLEYFDGFSIGSNDMTQLALGLDRDSGVVSELFDERNDAVKALLSMAIRA
                     AKKQGKYVGICGQGPSDHEDFAAWLMEEGIDSLSLNPDTVVQTWLSLAELKK"
BASE COUNT          654 a          761 c          683 g          643 t
ORIGIN      
        1 aagaggtggt ggcttttttt agccgtaaac gggtcgcaaa atataaatat cctgaacata
       61 tcgtggtaat cgaaaaacta ccgcgcactg cctcaggtaa aatacaaaag tttttgttaa
      121 gaaaagatat tatgcggcga ttaacgcagg atgtctgtga agagattgaa taagtttcat
      181 cttcggggat cacataaacc cggcgacaaa acgccgccgg gtatttattt tatttcttca
      241 gttcagccag gcttaaccag gtttgcacca cggtgtccgg attcagagac aggctatcga
      301 tcccctcttc catcaaccat gcggcaaaat cttcgtggtc ggacggaccc tgaccgcaaa
      361 tcccgacata tttgccctgt ttcttcgcgg cacggatagc catcgacagc aatgctttca
      421 ccgcatcgtt gcgctcatcg aacagttcag acaccacgcc ggagtcacga tccagaccga
      481 gcgccaactg cgtcatgtcg tttgagccaa ttgagaagcc gtcgaaatat tcgaggaact
      541 gctcggccag caaggcgttg gacgggattt cacacatcat gatgattttc agcccgttct
      601 caccacgctt cagcccctga cgcgccagtt cttcaaccac cgctttcgcc tggtctacgg
      661 tacgcacgaa cgggatcatg atctcaacgt tggtcagccc catgtcgttg cgcacacgtt
      721 tcactgcttc acactccagc gcgaagcagt cgcggaagct gtcggaaaca tagcggcccg
      781 cgccacggaa gccgagcatc gggttctctt catctggctc gtaacgctca ccaccgacca
      841 ggttggcata ttcgttcgat ttaaaatcag agagacggac aatgacgcgc ttcggataaa
      901 acgcggcacc cagcgtcgcg atcccttcag tcagacgacc aacgtaaaat tcacgcggag
      961 aatcaaaacc tttcatcatc tcgcggattt cgttttgcaa ctgcggttcc tgatcgtcaa
     1021 actcaagcag tgcgcgtggg tggacgccaa tcatacggtt gatgataaat tccagacgcg
     1081 caagtcccac gccttcgttc ggcagacagg cgaagtcgaa agctcgatcc gggttaccga
     1141 cgttcatcat cactttcaac ggcagatccg gcatggtttc tacgctggag cttttcacgc
     1201 taaattccag caactccgca tagacgtaac cggtatcacc ttcggcacaa gaaacagtga
     1261 cgttctcacc gtctttcatc cgttctgttg catcaccaca gcccacgacc gccggaatac
     1321 ccagttcacg agcgatgatc gccgcgtgac aggtacgacc gccacggttg gtgactatgg
     1381 cagatgcttt cttcatgatc ggttcccagt ccgggtcggt catgtcagtg accagcacgt
     1441 caccaggttc gatgcggttc atttcgctga tgtcatggat gactttcacc ggacccgcac
     1501 cgatgcgatg accgatagca cggccttcgg cgataatctt accctgtgaa tgcagcgtat
     1561 aacgctccat gacctgaccg cgtgagcgca cggtttccgg acgcgcctgc acaatgaaca
     1621 gtttgccggt gtggccatct ttcgcccact caatatccat cgggcgaccg tagtgtttct
     1681 caatttgtac ggcctgtttt gccagttcct gcacttcttc gttggtcagc gagaagatgt
     1741 cacgctgttc ctgcggtacg tcttcgattt taacctgctt gccgtgctcc tgggtcggcg
     1801 cgtaaaccat gcggattttt ttcgacccca tggtgcggcg cacgatagcc gggcgattcg
     1861 ccgccagtgt cggtttatgc acgtaaaact catccgggtt aaccgccccc tgcacgacca
     1921 tctcaccaag gccccatgcg gaagtgataa acaccacctg gtcaaagccg gattcggtat
     1981 caatggagaa catcacgcca gaagatgcga ggtcggagcg caccatccgc tgaacaccgg
     2041 cggagagcgc cacgccacgg tgatcgtaac cctggtgcac acgataagag atggcgcgac
     2101 cgttaaacag agaagcaaat acatgtttca ctgccacgag aacggcgtca aacccctgaa
     2161 cgttgaggaa ggtttcctgc tgaccggcaa aggaagcgtc cggcatatct tctgcggtgg
     2221 cggaggagcg caccgcaaaa gaggcgtttt cgtcatcggc ggaaagctga gcataggctt
     2281 cgcggatggc gttttccagc tcaggctgga agggagtgtc gataatccac tggcggattt
     2341 gcgcgcccgc tttcgcaagc tgagtaacat cgtcaatatc cgttttatcc agcagttcat
     2401 aaatgcgctg gtttacgccg ctttggtcca gaaactggtt aaacgcgtcg gcggttgtgg
     2461 cgaaaccatt cggaacggaa acgcccattc cggaaaggtt agtaatcatt tcacccaggg
     2521 aggcattttt gcccccaacc ctgtctacat cattcatgcc gagttggttg taccaaagca
     2581 ccagcggtga cgagccattg ttggacatcg aacaatcctt ttgtgataaa tgaacggttt
     2641 gagaaacaca tttctgcgca tttatctttg catatttaac cggatgaaaa aaacggtgaa
     2701 tcgttcaagc aaatatattt ttttactttt taagactgat c
//
LOCUS       DADMJE010000271         2683 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.276, whole genome shotgun sequence.
ACCESSION   DADMJE010000271 DADMJE010000000
VERSION     DADMJE010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2683)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2683)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2683
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.276"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            281..1123
                     /locus_tag="JN001_004083"
     CDS             281..1123
                     /locus_tag="JN001_004083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HAY9055098.1"
                     /translation="MLNGGGILFKANHVPVLMYHHVSHCPGLVTLSPETFRKQMKWLA
                     ENNWKTLSSDELEFFYRGGKLPRKSVMLTFDDGYLDNWFQVYPLLNEFNLKAHIFLIT
                     SFIGNGPVRHSPGKEYSHRDCEHQIATGNADNVMLRWSEVNEMLQSGLVEFHVHTHTH
                     TRWDKKLTSREEQCKHLRQDLLSGREYLKKMTGKCSKHLCWPEGYYNKDYIQIAEELG
                     FHYLYTTERRMNAPAKGTTRIGRISTKERENCVWLKRRLFYYTTPFFSSLLALHKGPR
                     LPDD"
     gene            1126..2214
                     /gene="capU"
                     /locus_tag="JN001_004084"
     CDS             1126..2214
                     /gene="capU"
                     /locus_tag="JN001_004084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative hexosyltransferase CapU"
                     /protein_id="HAY9055099.1"
                     /translation="MNILFTESSPNIGGQELQAVAQMKALKKMGHSVLLVCRENSKIA
                     FEASKFGIDITFALFRNSLHIPTVWRLLGIVHSFQPDAIVCHSGHDSNIVGLVRFFTW
                     KHPFRIIRQKTYLTRKTKFFSINHFCDEVIVPGTNMKTHLEQEGCRTRVTVVPPGFDF
                     QELYVDSRNSLPPSVLSWLASRRGCPVIAQVGMLRPEKGHEFMLNLLFHLKMNGRQFC
                     WLIVGSGSPELREHLQYQIDSMGMHDDVFIADNVFPAAPVYRVASLVVLPSENESFGM
                     VLAEASAFSVPVVATQIGGIPEVIQNNQTGTLLPAGNKHAWMCALNNFFNDPGRFYQM
                     ARLAKQDIEERFDINKTALKILTLAKQK"
     gene            2219..>2683
                     /gene="virK"
                     /locus_tag="JN001_004085"
     CDS             2219..>2683
                     /gene="virK"
                     /locus_tag="JN001_004085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY9055100.1"
                     /translation="MFSISNLSFIGFLKRIIFSSDSLPGKWEHRKFRFMYILRCSINP
                     VVSIRYYYELRSLPCIEDILAIHPTLPARIHRPYLHKGGRAWTRGQYILEHYRFVQNL
                     PEKYSKFLFPQKSVSLVQFIGKDGENFDIQCSPSGFDREGELMLSLFYNKTVI"
BASE COUNT          771 a          484 c          589 g          839 t
ORIGIN      
        1 ttctggtcaa caaccagttg agcggattcg cgtttaaact ctgcgctgaa atttcttttt
       61 tcattatggc acctgtgttg ttctgaggtg agcatatcac ctctgttcag gtagctaaat
      121 ttagtgtgcc acctcaaggt tcttagtgag ccgtttttaa aagatatgat aatatattat
      181 tgtttataaa ttgttgatgt ttgatttagt agtatataaa gttcaccaac tttattaggc
      241 tttcctttta tctctactta ctgggtgcca gaaactttaa attttaaacg gagggggcat
      301 tttgtttaaa gcaaatcatg ttccggtatt aatgtatcat catgtcagcc attgcccagg
      361 actggttaca ctttctcccg agacattccg gaaacaaatg aaatggttgg ctgaaaacaa
      421 ctggaaaaca ctgtcatcag atgaactgga gtttttttat cggggcggaa aacttccccg
      481 taaaagcgtt atgttgacat ttgatgatgg ataccttgac aactggtttc aggtatatcc
      541 tttattaaac gagtttaatc tcaaggcaca tattttttta attaccagtt ttattggaaa
      601 tggtccggtt cgtcactctc ctggaaagga atattctcat cgcgattgcg aacatcaaat
      661 agcaaccggg aatgctgata atgttatgct tcgctggtct gaagtgaacg aaatgttgca
      721 atctggtctg gtcgaatttc atgttcatac acatactcat acacgttggg ataaaaagct
      781 cacttcacga gaagaacagt gtaaacatct tcggcaggac ttattgagcg ggagagaata
      841 tttaaaaaaa atgacaggaa aatgcagtaa acatttgtgt tggccggaag gttattataa
      901 caaggattat attcagatcg ctgaagaact tggattccat tatttatata caacagaaag
      961 aagaatgaat gctcctgcta aaggaactac acggatagga agaataagca ccaaggaacg
     1021 ggaaaattgc gtatggctga aaagacgact tttttattat acaacaccgt ttttttcatc
     1081 gttgctggcc cttcataagg ggccaagatt accggatgac taataatgaa tatactattt
     1141 acggaatcat caccgaatat aggtggtcag gaattacagg ctgttgctca aatgaaggcc
     1201 ctgaagaaaa tggggcattc agttctgctt gtctgcaggg agaacagcaa aattgctttt
     1261 gaagccagta agtttggaat tgatatcaca ttcgcgttat ttcgaaacag tcttcacatt
     1321 cctactgtat ggagattact cggaatagtt catagttttc agcccgatgc aatcgtttgt
     1381 cacagtggac atgatagtaa tattgttggt ttggtacggt tttttacctg gaaacatcca
     1441 ttcagaatta tcaggcaaaa gacatatttg acacgaaaaa caaaattttt ttcaataaat
     1501 catttttgcg atgaggtgat tgttcccgga acaaatatga agacacatct ggagcaggaa
     1561 ggatgtcgaa ctcgggttac tgttgtgcct cctggctttg atttccagga attatacgtt
     1621 gattcccgaa acagtttgcc tccgagtgtt ctttcctggc tggcatcccg aagaggatgc
     1681 cccgtaattg ctcaggtagg aatgttgcgc ccggaaaaag ggcacgaatt tatgttgaat
     1741 ttactgttcc atttaaaaat gaatggacga cagttctgtt ggttgattgt ggggtctggt
     1801 tcacctgaac tgcgggaaca tttacagtat cagattgaca gtatgggcat gcatgatgat
     1861 gtttttattg ctgacaatgt ttttcctgcc gcccccgtat atcgggttgc cagtctggtg
     1921 gttctgcctt cagaaaacga atcttttggt atggtgctgg cagaagcatc ggcattttct
     1981 gtgcctgtag tggccactca gattggtgga atccctgagg ttattcagaa caaccagacc
     2041 gggacattgt taccagcagg taataagcac gcatggatgt gcgccctgaa taattttttt
     2101 aatgaccctg ggcgttttta tcagatggct cgcctggcaa aacaggatat agaagagcgg
     2161 tttgatatta ataaaactgc gttaaaaata ctcacattag cgaagcaaaa gtaacaatat
     2221 gttttctata agtaacttat catttatcgg tttccttaaa aggattattt tttcctcaga
     2281 ttcactaccg gggaagtggg aacacagaaa atttcggttc atgtacattt tgcgatgttc
     2341 tataaatccg gttgtcagta ttcgatatta ttatgaactg cgttccttgc cgtgcattga
     2401 ggatattctg gcaatacacc ccacgttgcc agcaagaatt catcgccctt atttgcataa
     2461 aggggggcgc gcctggaccc gtggacaata tattcttgag cattatcgct ttgtgcaaaa
     2521 tttgccagaa aaatattcta aatttttgtt tccacaaaaa tcggtatcat tagtccaatt
     2581 catcgggaaa gatggagaga attttgatat ccagtgttct cccagtggtt ttgaccggga
     2641 aggagagttg atgttgtcat tgttttacaa taaaacagtt att
//
LOCUS       DADMJE010000272         2668 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.277, whole genome shotgun sequence.
ACCESSION   DADMJE010000272 DADMJE010000000
VERSION     DADMJE010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2668)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2668)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2668
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.277"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            231..770
                     /locus_tag="JN001_004086"
     CDS             231..770
                     /locus_tag="JN001_004086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015870862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesin"
                     /protein_id="HAY9055101.1"
                     /translation="MSHGGWKEISHPQTLFTRQKGDGWTVVPKNLRIDFYTKDNDFTK
                     GLSVLSEVNKRHTEAQKGLTPSLNISKDDLKVLANARNIPQSKLEEEMMSQAIYRKEY
                     ATSNEKIKNYALYYHEQAQNIIQRHQDGLGNKNIDIAFITDKNHKKHLSDIFKVINES
                     GVKYDVIHFGACRVNREEK"
     gene            complement(996..1319)
                     /locus_tag="JN001_004087"
     CDS             complement(996..1319)
                     /locus_tag="JN001_004087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_052604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nikA protein"
                     /protein_id="HAY9055102.1"
                     /translation="MTKRSGSNTRRRAISRPVRLTAEEDQEIRKRAAECGKTVSGFLR
                     AAALGKNVNSLTDDRVLKEVMRLGALQKKLFIDGKRIGDREYAEVLIAITEYHRALLS
                     RLMAD"
     gene            1592..1786
                     /locus_tag="JN001_004088"
     CDS             1592..1786
                     /locus_tag="JN001_004088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001041639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rop family plasmid primer RNA-binding protein"
                     /protein_id="HAY9055103.1"
                     /translation="MNKQQQAVLNMAGFIKSQSLTLLEKLDALDADEQATMCEKLHEL
                     AEELQNSIQTRFEVENSTER"
BASE COUNT          863 a          656 c          564 g          585 t
ORIGIN      
        1 aaaaaaaaac aataaaaaac accgcaaaaa tggattgtta acaaatgaaa atactcaatt
       61 cgaatctcat aacaaacata tcatcaacaa taagaaatca ccttctaaca tcatccaaaa
      121 atataaaaac acacccatca ccaaacatgg acgtaacaag tcatcgtcgt ttattccaga
      181 aagacggaat aggattgagc caaacaggaa aagcaacaca acttgtcatt atgtcgcatg
      241 gtggatggaa agagatctcc catccacaaa cactattcac gcgtcaaaaa ggcgatggat
      301 ggactgtagt ccccaaaaac ctaagaattg atttttatac aaaagacaac gacttcacaa
      361 agggactaag cgttctttca gaggtaaaca aacgccatac tgaagctcaa aaagggttaa
      421 caccatcact aaacataagc aaagatgacc taaaagttct agcgaacgcg cgcaatatac
      481 ctcaatcaaa attagaagaa gaaatgatgt cacaagccat atatagaaaa gaatacgcaa
      541 caagtaatga gaagataaaa aactatgctc tatattacca tgaacaagcc caaaatatta
      601 tacaaagaca tcaagatggc ttaggaaaca aaaatattga tatagcattt ataactgata
      661 aaaatcataa gaagcacctt tctgacatat ttaaagtaat aaatgaatca ggagtaaaat
      721 atgatgtaat tcactttggc gcttgccgag taaatagaga ggagaaataa tcatcattta
      781 ccataatccc ttaattgtac gcaccactga aacgcgctga acgcgattct gacgcagaca
      841 ccacaaaaat agatgtttta ccccggaaaa acaggaagga tgcgtcagga tcgttttcag
      901 ctcgctgcat agctatgcat gaaagcgaat ggagatcact ttgggagctt accgtgttca
      961 taccgtctgt tttcaacagt tttctccccg ggaagctaat ctgccataag cctggataac
     1021 agggcacggt gatactccgt aatagcgatc agcacctccg catactccct gtccccgata
     1081 cgcttgccgt cgataaagag ttttttctgt aacgccccca gtctcataac ttctttcagt
     1141 acccgatcat cagtcagtga gttaacgttc ttaccgagag ctgccgcccg taaaaaaccg
     1201 gaaacggtct tgccgcattc agcagccctt tttctgattt cctggtcttc ttctgccgtc
     1261 agacgaacag ggcgactgat agcccgcctg cgcgtattac ttccacttcg ttttgtcata
     1321 aaacatggct ccgtatctga catgggtgtc ggggcaaagc cctgaccagg gcaattgtaa
     1381 tagcgtgcat gtatgcgcgg tataacaatt gcacatcctg tcctgtcagc aagctcgaat
     1441 taccgacaaa ggcacggcag ttttttggca gttacagtgt tgtctgacag aaatgcccgt
     1501 caaaaagcca ggcggcagca aaacagtcga aaagtggtac gcgatataat cacataacgc
     1561 agatgacaga cagaacggag aaaacgaaaa gatgaacaag cagcagcaag ccgtactcaa
     1621 catggcggga ttcataaaaa gccagagcct gacgctgctc gaaaaactgg acgcactcga
     1681 tgctgacgag caggccacca tgtgtgagaa actacacgaa ctcgcagaag aactccagaa
     1741 cagcatacag acacgctttg aagtagaaaa tagcacagag agataacgct caggacagga
     1801 tgtcgaacgg cacaacagag cgtaaggaga aaatgtcaca taaggcgctc ttccgcttcc
     1861 tcgctcactg actcgctacg ctcggtcgtt cgactgcggc gagcggtatc agctcactca
     1921 aaggcggtaa tgcggttatc cacagaatca ggggataacg ccggaaagaa catgtgagca
     1981 aaaagccgaa ggcagggaca aaggccgcgc aggtggcgtt tttccatagg ctccgccccc
     2041 ctgacgagca tcacaaaaat cgacgctcaa gtcagaggtg gcgaaacccg acaggactat
     2101 aaagatacca ggcgtttccc cctggaagct ccctcgtgcg ctctcctgtt ccgaccctgc
     2161 cgcttaccgg atacctgtcc gcctttctcc cttcgggaag cgtggcgctt tctcatagct
     2221 cacgctgttg gtatctcagt tcggtgtagg tcgttcgctc caagctgggc tgtgtgcacg
     2281 aaccccccgt tcagcccgac cgctgcgcct tatccggtaa ctatcgtctt gagtccaacc
     2341 cggtaagaca cgaattatcg ccactggcag cagccactga taaccgaatt agaggagtaa
     2401 gacttgaagt catgcgcctg ttaaggctaa actgaaagaa caagttttgg tgactgcgct
     2461 cctccaagcc agttacctcg gctcaaagag ttggtatctc tgagaacctt cgaaaaaccg
     2521 ccttgcaggg cggttttttc gtttacaggc agtagattac gcgcagaaaa aaaggatctc
     2581 aagaagaacc tttaattttt tttcacactt ggtatcctac tttaacccat aaaataaaca
     2641 cttacaccga cacgccctta aacaaaag
//
LOCUS       DADMJE010000273         2653 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.278, whole genome shotgun sequence.
ACCESSION   DADMJE010000273 DADMJE010000000
VERSION     DADMJE010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2653)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2653)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2653
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.278"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            161..865
                     /locus_tag="JN001_004089"
     CDS             161..865
                     /locus_tag="JN001_004089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001706993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055104.1"
                     /translation="MWFETGDNGNEYFKWRSRQSTTTKDLMTLKWDALNILVNAVING
                     SLGVGSTNALGGSSIVLGDNDTGFKQNGDGILDVYANSQRVFRFQNGVAIAFKNIQAG
                     DGKKFMLSSSNNSTKNATFNLWGASTRPVVAELGNEAGWHFYSQRNTDNSVIFSVNGQ
                     IQPSNWGNFDSRYVKDVRLGTRVVQLMARGGRYEKAGHAITGLRIIGEVDGDDEAIFR
                     PIQKYINGTWYNVAQV"
     gene            834..1397
                     /locus_tag="JN001_004090"
     CDS             834..1397
                     /locus_tag="JN001_004090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000930007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9055105.1"
                     /translation="MAHGITSHRCKLCSILKNIKSGNPKTKEQYQLTKNFDVIWLWSE
                     DGKNWYEEVNNFQDDTIKIVYDENNIIVAITKDAPTLNPEGFSVVEIPDITANRRADD
                     SGKWMFKDGTVVKRIYTADEQQQQAESQKVALLSEAESVIQPLERAVRLNMAMDEERT
                     RLESWERYSVLVSRVDTANPEWPQKPE"
     gene            complement(1426..1959)
                     /locus_tag="JN001_004091"
     CDS             complement(1426..1959)
                     /locus_tag="JN001_004091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000972171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9055106.1"
                     /translation="MMHLKNITAGNPKTKEQYQLTKQFNIKWLYSDDGKNWYEEQKNF
                     QPDTLKMVYYHNGVIICIEKDVSAINPEGASVVELPDITANRRADISGKWLFKDGVVI
                     KRTYTEEEQRQQAENEKQSLLQLVRDKTQLWDSQLRLGIISDENKQKLTEWMLYAQKV
                     ESTDTSSLPVTFPEQPE"
     gene            complement(1962..2519)
                     /locus_tag="JN001_004092"
     CDS             complement(1962..2519)
                     /locus_tag="JN001_004092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000863301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055107.1"
                     /translation="MAGVGFDGSSDISISAKNVNAFALRQTGNTVNGDTSVGWNWDSG
                     AYNALIGGASALILHFNINAGSCPAVQFRVNYKNGGISYRSARDGYGVELGWSDFYTT
                     TRKPSAGDVGAYTRAECNSRFITGIRLGGLSSVQTWNGPGWSDRSGYVVTGSVNGNRD
                     ELIDTTQARPIQYCINGTWYNAGSI"
BASE COUNT          757 a          566 c          591 g          739 t
ORIGIN      
        1 ggaaacggta aacagggctg gtaacgccgt gcaaaaaaat ggcgatacct tgtccggtgg
       61 gcttactttt gaaaatgact caatccttgc ctggattcga aatactgact gggcgaagat
      121 tggatttaaa aatgatgccg atggtgacac tgattcatac atgtggtttg aaacaggcga
      181 caacggcaat gaatatttca aatggagaag ccgccagagc accacaacaa aagacctgat
      241 gacgctgaaa tgggatgcac taaatattct tgttaatgct gtcattaatg gcagtcttgg
      301 agttggttcg acgaatgcgt taggtggtag ctctattgtt cttggtgata atgacaccgg
      361 atttaaacag aatggagacg gtattctgga tgtttatgct aatagtcagc gtgtattccg
      421 ctttcagaat ggagtggcta ttgcttttaa aaatattcag gccggggatg gtaaaaaatt
      481 catgctatcc agctccaaca actccacaaa gaatgcaacg tttaatttat ggggtgcttc
      541 aacccgtcca gtagttgcag agttaggcaa tgaggcagga tggcatttct atagccagcg
      601 aaatacagat aactcggtaa tattttctgt taacggtcag atacagccca gcaactgggg
      661 gaattttgat tcacgctatg taaaagatgt tcgcctgggt acgcgtgttg ttcaattgat
      721 ggcgcgtggt ggtcgttatg aaaaagccgg acacgcaatt accggattaa gaatcattgg
      781 tgaagtagat ggcgatgatg aagccatctt cagaccaata caaaaataca tcaatggcac
      841 atggtataac gtcgcacagg tgtaaattat gcagcatatt aaaaaatatt aagtccggaa
      901 atccaaaaac aaaagaacaa tatcagctaa caaagaattt tgatgttatc tggttatggt
      961 ccgaagacgg taaaaactgg tatgaggaag taaataactt tcaggacgac accataaaga
     1021 ttgtatacga cgaaaataat attattgttg ccataaccaa agatgcccca acgcttaatc
     1081 ccgaaggctt tagtgtcgtt gagattccag atataacagc caatcgtcgt gccgatgatt
     1141 cagggaagtg gatgtttaag gacggaactg tggttaagcg gatttataca gcagacgaac
     1201 agcaacaaca ggccgaatca caaaaggtcg cgttgctttc tgaagctgaa agcgttattc
     1261 agccactgga acgcgctgtc aggctgaata tggcgatgga tgaggaacgc acacgactgg
     1321 agtcatggga acgctacagc gttctggtca gccgtgtgga tacagcaaat cccgaatggc
     1381 cacaaaagcc tgagtaaaaa ttaaggccca atatcgggcc ttctctcatt ctggttgttc
     1441 gggaaacgtt actggcaggc tggaggtgtc tgtagattcg actttctgcg catagagcat
     1501 ccactcggtt aatttttgtt tattctcgtc ggaaatgatg cccagccgta gctgtgagtc
     1561 ccatagctgg gttttatccc tgacaagttg caacaggctt tgcttttcat tttccgcttg
     1621 ttgcctctgc tcttcctcgg tataagttcg ctttatcact acgccatctt tgaacaacca
     1681 tttccccgaa atatcagccc ggcgatttgc tgtaatatca ggtaattcaa cgacgcttgc
     1741 gccttccgga ttaattgctg aaacatcctt ttcaatacaa ataataacgc cgttatggta
     1801 atagaccatt ttcaaagtgt ctggctggaa attcttttgt tcctcatacc agttttttcc
     1861 atcatctgaa taaagccatt tgatgttaaa ttgctttgtt agctggtatt gctcttttgt
     1921 tttagggttg ccagcagtaa tgttttttaa gtgcatcatc gttaaatact ccccgcgtta
     1981 taccacgtcc cattaatgca atactgaatt ggccttgcct gtgttgtatc aattaattca
     2041 tcacggtttc cgttaactga acccgtaacg acataacctg acctgtcaga ccagccggga
     2101 ccattccatg tctgaacaga tgacagaccg ccaaggcgaa tacctgtaat aaaccttgag
     2161 ttacattctg cccgcgtata tgcaccaaca tctcccgctg aaggttttcg tgtcgtggta
     2221 tagaaatctg accaacctaa ttcaacccca taaccatcac gagccgacct gtaggaaatg
     2281 ccaccatttt tataattcac acggaattgt acggcaggac agctaccagc atttatatta
     2341 aagtgaagaa ttaatgcaga tgcaccacca atcagggcgt tatatgcacc actatcccaa
     2401 ttccatccaa cggatgtatc accattaaca gtattacctg tttgtcggag tgcaaatgca
     2461 ttgacatttt tggcactaat tgagatatcg ctagaaccat caaaaccaac tccagcaatt
     2521 tttcgtgctg ttttcagctt tgttgcagta gcggcattgc cggacagttc cccagaaagg
     2581 ccaccgctga atgtttgtcg attggtccag gtattcgctg tactgagtaa cggtattttc
     2641 tccccgcttg tgc
//
LOCUS       DADMJE010000274         2580 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.279, whole genome shotgun sequence.
ACCESSION   DADMJE010000274 DADMJE010000000
VERSION     DADMJE010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2580)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2580)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2580
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.279"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..2271
                     /locus_tag="JN001_004093"
     CDS             <1..2271
                     /locus_tag="JN001_004093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial biogenesis outer membrane usher
                     protein"
                     /protein_id="HAY9055108.1"
                     /translation="NKKKVSQKKITFTANAEQLLQPQFTVEQLRELGIKVDEIPALAE
                     KDDDSVINSLEQIIPGTAAEFDFNHQRLNLSIPQIALYRDARGYVSPSRWDDGIPTLF
                     TNYSFTGSDNRYRQGNRSQRQYLNMQNGANFGPWRLRNYSTWTRNDQASSWNTISSYL
                     QRDIKALKSQLLLGESATSGSIFSSYTFTGVQLASDDNMLPNSQRGFAPTVRGIANSS
                     AIVTIRQNGYVIYQSNVPAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYSSLP
                     MMQRPRHLKYSATAGRYRADANSDSKEPEFAEATAIYGLNNTFTLYGGLLGSEDYYAL
                     GIGIGGTLGALGALSMDINRADTQFDNQHSFHGYQWRTQYIKDIPETNTNIAVSYYRY
                     TNDGYFSFDEANTRNWDYNSRQKSEIQFNISQTIFDGVSLYASGSQQDYWGNNEKNRN
                     ISVGVSGQQWGIGYSLNYQYSRYTDENNDRALSLNLSIPLERWLPRSRVSYQMTSQKD
                     RPTQHEMRLDGSLLDDGRLSYSLEQSLDDDNNHNSSLNASYRSPYGTFSAGYSYGNDS
                     SQYNYGVTGGVVIHPHGVTLSQYLGNAFALIDANGASGVRIQNYPGIATDPFGYAVIP
                     YLTTYQENRLSVDTTQLPDNVDLEQTTQFVVPNRGAMVAARFNANIGYRVLVTVSDRN
                     GKPLPFGALASNDDTGQQSIVDEGGILYLSGISSKSQSWTVRWGNQADQQCQFAFNTP
                     DSEPTTSVLQGTAQCH"
     gene            2282..>2580
                     /locus_tag="JN001_004094"
     CDS             2282..>2580
                     /locus_tag="JN001_004094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9055109.1"
                     /translation="MKRAPLITGLLLISTSCAYASSGGCGADSTSGATNYSSVVDDVT
                     VNQTDNVTGREFTSATLSSTNWQYACSCSAGKAVKLVYMVSPVLTTTGHQTGYYKL"
BASE COUNT          720 a          624 c          602 g          634 t
ORIGIN      
        1 aataaaaaga aggtttcaca gaaaaaaatt acatttaccg ccaatgcaga gcaacttctg
       61 cagccacagt ttacggtaga acaactacgt gagctgggta ttaaggtgga tgaaatcccg
      121 gcgctggctg aaaaagatga cgatagcgtg atcaactcgc ttgaacaaat cattcccggt
      181 acagctgctg aatttgattt caatcatcag cgacttaatt tgagcattcc ccaaattgca
      241 ctgtaccgtg atgcaagagg ttacgtctcc ccttctcgtt gggacgatgg tataccaacg
      301 ctgtttacca actactcgtt tacaggttct gataaccgtt accgccaggg caatcgtagc
      361 caacgacagt acctgaatat gcaaaatggt gctaattttg gcccctggcg attacgtaac
      421 tattctacgt ggacacgcaa cgatcaggcg tcaagctgga acactatcag tagttattta
      481 caacgtgata tcaaggcgtt gaagtctcag ttgcttctgg gagaaagcgc caccagcggc
      541 agtatttttt ccagctacac ctttactggc gtgcaactcg cttccgacga taatatgttg
      601 ccaaacagcc agcgcggatt tgccccaacg gtacgcggta tcgcaaacag tagtgcaatc
      661 gtgactatca ggcaaaatgg ttatgtgatc tatcaaagca acgtgccagc gggtgccttt
      721 gaaattaacg atctctaccc ctcttccaac agcggcgatt tagaagtcac gattgaagaa
      781 agtgacggta cacaacgtcg ctttatccag ccttattctt cattacccat gatgcagcga
      841 cctaggcatc taaaatatag cgcgaccgct ggacgctatc gcgctgatgc aaacagtgat
      901 agcaaggaac ccgaatttgc tgaagccacg gcaatatatg gtttgaataa tacttttacg
      961 ctgtatggcg gcctgctcgg ttctgaagat tattatgcgc tggggatcgg tatcggcggc
     1021 acacttggcg cactgggcgc cttgtcgatg gatatcaaca gagctgacac ccaattcgat
     1081 aaccagcact cttttcatgg ctatcaatgg cgtacgcagt acatcaaaga tatcccggaa
     1141 accaacacca atatcgctgt tagctactat cgctatacca acgatggcta ttttagtttt
     1201 gatgaagcca atacccgcaa ttgggactat aacagtcgcc aaaaaagtga aattcaattc
     1261 aacatcagcc agacaatatt tgatggggta agtctgtatg cctccggttc gcagcaagac
     1321 tattggggca ataacgagaa aaacaggaat atctctgttg gggtttccgg ccagcaatgg
     1381 ggaattggtt acagcctgaa ttatcaatac agccgctaca ctgatgaaaa taatgaccgt
     1441 gcactctctt tgaatctcag tattccgtta gaacgctggt taccgcgtag ccgggtttcc
     1501 tatcagatga ccagccagaa agatcgccca acccaacatg aaatgcgtct tgatggctca
     1561 ctgctggatg atggtcgcct gagctatagc ctggaacaaa gtctggatga cgataacaac
     1621 cataacagta gcctgaacgc cagttaccgt tcaccttatg gaaccttcag tgccggatac
     1681 agttacggta atgacagcag ccaatacaat tacggcgtta ccggcggcgt ggttatccat
     1741 cctcatggcg tgacgctctc gcaatatctg ggcaacgctt ttgcgcttat cgatgctaac
     1801 ggggcttctg gcgtgaggat acaaaactat ccggggattg ctactgatcc ctttggctat
     1861 gcagtgattc cttatctcac gacttatcag gaaaaccgtc tctcggtaga tactacgcag
     1921 ctgcccgata acgtcgatct tgaacaaaca acacagtttg tggtgcccaa cagaggtgca
     1981 atggtagcgg cgcgtttcaa cgccaatatc ggttatcgcg tacttgttac agtcagcgat
     2041 cgcaacggta aaccgttgcc ctttggcgct cttgccagca acgatgatac ggggcaacaa
     2101 agtatcgtcg atgagggcgg catactatat ctctctggga tatcgagtaa atcacaaagc
     2161 tggactgtac gctggggaaa tcaggcagat caacaatgtc agtttgcttt taatacaccg
     2221 gattcagaac caacaacctc tgtattacaa ggtacagcgc agtgccatta aggataaaaa
     2281 aatgaaaaga gcgcctctta taacaggact tttgttgata tccacatcct gcgcttatgc
     2341 ctcctcagga gggtgtggag ccgacagcac tagcggtgcg acaaattaca gcagtgtggt
     2401 tgatgatgtt acggtgaacc agacagataa cgtgacagga cgggagttta cctctgcaac
     2461 gctaagtagc actaactggc aatacgcctg ttcctgctct gcgggtaagg cagttaaact
     2521 tgtctatatg gtcagccccg tacttaccac cactggacat cagacaggat attacaaact
//
LOCUS       DADMJE010000275         2575 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.280, whole genome shotgun sequence.
ACCESSION   DADMJE010000275 DADMJE010000000
VERSION     DADMJE010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2575)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2575)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2575
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.280"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..323
                     /locus_tag="JN001_004095"
     CDS             <1..323
                     /locus_tag="JN001_004095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2612 domain-containing protein"
                     /protein_id="HAY9055110.1"
                     /translation="APFYNGKSDTRTVDLSDAVYRRLILMKAMSNITDCSVPDINRML
                     RFMFGKKRRAYVLNNGGLRMSYIFESALSLAELAIIQSSGALPSPPGVYVSVVLKESR
                     NEGQ"
     gene            310..840
                     /locus_tag="JN001_004096"
                     /pseudo
     CDS             310..840
                     /locus_tag="JN001_004096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001748478.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            1174..1695
                     /locus_tag="JN001_004097"
     CDS             1174..1695
                     /locus_tag="JN001_004097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055111.1"
                     /translation="MDVYANSQRVFRFQNGVAIAFKNIQAGTARKFTLSSANNSTKNA
                     AFYLWGNPSRSVVAELGDDSGWHFFSQRNTDNSITFAVNGQVIPLNYGNFDARYKYRT
                     EGVQDVRYGHEMYYSPGSNTVSWRFRAPSGHGLSGIAISDTGRDSADNVNGVYYRPLQ
                     KLINGTWYNVASV"
     gene            1755..2243
                     /locus_tag="JN001_004098"
     CDS             1755..2243
                     /locus_tag="JN001_004098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
                     /protein_id="HAY9055112.1"
                     /translation="MTKQYDVTWLFSKDGKNWYEELKNFASDTIKITYTGDGRVVWVG
                     KDVTGIEPRNASVIEVPDITANRRITAPGYWFYRNDEFVFDYRLKAEDERDALLAQVS
                     ARTGEWEEDLLLGLISDEDREKLKAYRIYAKSLQAMDFSVITDKTSYNAIEWPASPEI
                     SS"
     gene            2267..2509
                     /locus_tag="JN001_004099"
                     /pseudo
     CDS             2267..2509
                     /locus_tag="JN001_004099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
     gene            complement(2508..2575)
                     /locus_tag="JN001_004100"
                     /pseudo
     CDS             complement(2508..2575)
                     /locus_tag="JN001_004100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707860.2"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="antitermination protein Q"
BASE COUNT          678 a          566 c          695 g          636 t
ORIGIN      
        1 aggcaccgtt ttacaacgga aaatcggata cccggactgt tgacctgtct gatgctgtat
       61 accggcggct gatactgatg aaagccatgt cgaacattac tgactgttcc gttccggata
      121 ttaaccggat gctgagattt atgttcggaa aaaaacggcg agcttatgtt ctgaataatg
      181 gtgggctgag gatgagttac atctttgagt ccgcgctctc gttggcagaa ctggcgatta
      241 tccagtcgtc gggtgcactg ccgtccccgc cgggtgttta tgtttcagta gttttaaagg
      301 agtcccgtaa tgaaggccag tgataaaccc cgccagctgg cggtcccctt tgcgagtacc
      361 ggagataaaa accgtatccc ggacaaggcg acacagcaga ccagagagag cggtaatgct
      421 gcgtatgatt caggttttcc tccggtgacc atgacagcgg tctcagcggg aggtataccg
      481 ccacacggca aggattttaa cggtctgatg tacgatatta ccgcagcaat acggttcgcc
      541 caggctggcg gtttgtacac gtataatgcc ggttttgcgg gggccattgg tggatatgca
      601 aaaggagcca ttctcgccgg agtcgcaaca acagcggtct ggctgaatac cacagacgat
      661 aacctgaccg atcctgaagg ctccgacagt gcgggctggg taaatcttct tgaggatccg
      721 aaaaggatat tcctgcggca gaagaacaat ctgtcagacc ttcagaataa agggacagta
      781 cgggataatc ttcaggttta cagtaaagag cagtcagatc aacgctatgt tcatcgggaa
      841 ggcgataaaa taaccggaga gctgaaaatc cgtggtgtta atgcgctgag gattttcaac
      901 gaagcttttg gcctgatttt tcgtcgttcg gaagagtgcc tgcaccttat tcccaccagt
      961 gaaggtcagg gggaaaatgg cgatattggt cccctgcgcc cgttcaccat taatttgcgg
     1021 acgggtgaaa tatccatgtc gcataaagtg tctgttggcg gtggttcgca ggtcaatggt
     1081 gcgctgggta tcggcgttca gaacgccctg ggggggaatt caattgttct tggtgataat
     1141 gacaccggat ttaaacagaa tggagacggt attctggatg tttatgctaa tagtcagcgt
     1201 gtattccgct ttcagaatgg agtggctatt gcttttaaga atattcaggc cggaactgcc
     1261 agaaaattca cgttatccag cgccaacaac tccacgaaaa atgcagcgtt ttatttgtgg
     1321 ggtaatccat ccaggtctgt tgttgcagag cttggcgatg attcaggctg gcattttttc
     1381 agccagagga atacagataa cagcatcacg ttcgccgtaa acggacaggt aattccgtta
     1441 aattacggaa acttcgatgc ccgctataaa tatcgaacag agggggtaca ggatgtacgg
     1501 tatggccatg aaatgtatta cagccccggc agtaacaccg tttcgtggag atttcgcgca
     1561 ccttcgggac acgggctgtc agggatagcg atatcggata ccggccgtga ctcagcggat
     1621 aacgtcaacg gcgtgtatta ccgcccgctt cagaaactga ttaatggcac ctggtataac
     1681 gtggcgagtg tttaacaatg ttgcatttaa aaaatattac tgcgggcaat ccgaaaaccg
     1741 tggaacaata tcagctgaca aaacaatatg atgtcacctg gcttttttcg aaagacggaa
     1801 aaaactggta tgaagagctg aagaatttcg ccagcgacac aattaaaata acttacaccg
     1861 gagacggtcg cgtggtgtgg gtcggtaagg atgtgactgg cattgaaccc cgtaacgcca
     1921 gtgttattga agttcctgat attaccgcca accgccgcat taccgcgccg ggttactggt
     1981 tttaccgcaa tgatgaattt gtctttgact acagactcaa agcggaagat gagcgtgatg
     2041 cccttctggc tcaggtcagt gcccggacag gggaatggga agaagacctg ctgctggggc
     2101 taatcagcga cgaagaccgg gaaaaactga aagcgtaccg catttacgcg aaatcgctgc
     2161 aggcgatgga tttcagtgtc atcactgata aaacctcata caacgccatt gaatggcccg
     2221 cctctccgga aatttcttcc tgatttaatt tatcgcgaga aaaactatgt ctgtagtgat
     2281 atcaggtgcg ctgactgatg gcgcaggtat ccccatgtcc ggataccata ttattctgaa
     2341 atcccgggta aacaccccgg aagtggtgat gcacactgtt gctgatgtga tgacaggaaa
     2401 cgatggtgaa tactgtttcc atgcgcggac tggaaaatat ggtgtgtatc tgaaaccggg
     2461 ctggcacaac gagtacaacg ttggcgacat tgctgtatat gaggactcaa tgaggtgtac
     2521 tggcaatagc ggacactacc atttgttctt tttttaagca gctatctgat gatat
//
LOCUS       DADMJE010000276         2480 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.281, whole genome shotgun sequence.
ACCESSION   DADMJE010000276 DADMJE010000000
VERSION     DADMJE010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2480)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2480)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2480
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.281"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            135..564
                     /locus_tag="JN001_004101"
                     /pseudo
     CDS             135..564
                     /locus_tag="JN001_004101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013747467.1"
                     /note="frameshifted; internal stop; incomplete; partial in
                     the middle of a contig; missing N-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS91 family transposase"
     gene            751..915
                     /locus_tag="JN001_004102"
                     /pseudo
     CDS             751..915
                     /locus_tag="JN001_004102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001436458.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
     gene            1409..1987
                     /locus_tag="JN001_004103"
     CDS             1409..1987
                     /locus_tag="JN001_004103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055113.1"
                     /translation="MKVSFKSLGYIFHDIYNKKHTIDEFNDVVRKAVLSGKINELNAC
                     HKVAIFLAEKDNEITKKDKAKIIDTLTENYSIEFQQLMNISERTLNSSLYITPGESGF
                     VSFVNREGKICHTAYVKSSDNSMAYYHANYSSIDKYITDMCGLICMRHIESTCIIFYM
                     LDEKVLSAIAEFMNEKGWRAAFCSAKNLYKCV"
     gene            complement(2096..2354)
                     /locus_tag="JN001_004104"
                     /pseudo
     CDS             complement(2096..2354)
                     /locus_tag="JN001_004104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611146.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            2338..2480
                     /locus_tag="JN001_004105"
                     /pseudo
     CDS             2338..2480
                     /locus_tag="JN001_004105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343765.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          753 a          451 c          631 g          645 t
ORIGIN      
        1 attcctgccg gtatcaacgc cgacggcatg tattgccctg aatgcggtac ggttcactgg
       61 ccggatggcg ttattccgcc tttctgatgc ttccccgttt tgccgatatt tttcagcagg
      121 gaaaccgatg gcttaactgg ctggagaagc agccggtgca gatgagccgc ctggaacatt
      181 atgccggtca ggatgaaatt ggcctgcgtt acaacagcca ccggacaaaa cgagaagaaa
      241 accttgtgat gagtggcgac gagtttatgg aaaggttctc ctggcatgtg gcggataagg
      301 ggttccggat ggtgatacgg ggtcctgagt ccggtgaagc ggcgattact ggaagatgtg
      361 gtgtacgcca taacggagac agtgagaaaa acggcgaggc aaatcacaag gagagggatg
      421 tatcagcagt gactgaaggt tgacccgctg aagtgcgagc tgtgcggagg tcagatgcgg
      481 tttacggggc tgaagagggg ttaccgtctg gcagagcagg ttatgatgca tgagccgctg
      541 gctcgaatac ggtggtgcgg ctgagagtcg cagaggggaa gttgcgtcca tgttgagggg
      601 aacggagcaa aaaaccatca gagatacatt gaatcaatca atgtaagcaa tattaagtgt
      661 ctataccgat tacttgatga tcaggttgtg ttgaataaac gcgcattctt cggtgctttt
      721 ttaatctttt ggggatttaa attcctatcg atgaactgtc gatatgaaaa agcgagcatc
      781 atactgacgt caaacaaagg ggtcgcagac tggggagaaa tgttcggaga tcacgtgctg
      841 gcaacagcga tcctagatcg gctgctacac gctgaatatc aaaggagaga gttaccggtt
      901 aaaagagaaa cgtaaagctg gagtgctgac caaaaacaca acgccaatca gtgatgatga
      961 aatggtggaa aacggacagc atcagtaacg aaagtatctt agcaggcatg aaaatcgtcc
     1021 gcatccccta aacggtcaaa atgcttctgc cgtgaaggag ggagaatgcc atctcatcac
     1081 ttatatctgg cgaatgaaac acagatggtc ggccttgccc ccaaacacac ggcggtgcaa
     1141 aatggaatgg cagaaaactt cgtcaaaacg atgaaatatg attaaatcag tgttatgttc
     1201 gaacctgacg tgttaacagc agtaaagtag tctcgcgaag gtgttcaaac attataatga
     1261 atggcatcct catagtgcgc agggttatcg cttgctgcgg aaatatctga agcgacgtac
     1321 cagtaatggg gaaaatgata gctggtttct gaaaatatag aggaaaatgt gatatatata
     1381 tcctgttaat atttaaggag aatataaaat gaaagtctcg tttaagtctt taggctatat
     1441 ttttcatgat atatataata aaaaacacac tatcgatgag ttcaacgatg tggtaagaaa
     1501 agcagtttta tcaggtaaaa ttaacgagct gaatgcatgt cataaagtgg caatttttct
     1561 tgccgaaaaa gacaatgaga taacaaagaa agacaaagcc aagataatag atacattaac
     1621 tgaaaactat tccattgaat ttcaacaatt aatgaatatt agtgagcgca cgttaaattc
     1681 atctttatat attactcctg gtgaaagtgg ttttgtcagt tttgttaatc gtgaaggaaa
     1741 aatatgtcat actgcatatg taaaatcatc agataatagc atggcatatt accatgcaaa
     1801 ttatagcagc attgacaaat atattacgga tatgtgcggc cttatttgta tgaggcatat
     1861 tgagtctact tgcattattt tttatatgct tgatgaaaaa gttttatctg ccattgctga
     1921 atttatgaat gaaaaaggat ggcgggctgc gttttgttca gcaaagaact tatataaatg
     1981 tgtttaattt tagaaaaact atttggtaaa atccaacaag agtcgagagg ttcgcgttgc
     2041 ttcagcaggg cctcagcctg ttcaaccaga ctcagttgca ggtcgtgacg cagatttagt
     2101 ggtggtggtt gattgtcaga taccagccga tgatcttata gtgcatatca tcagactttg
     2161 agaagcatat ggttttgcgg gtaagccgct taagatgtgt ccgcaggttc agattatgtc
     2221 gctctatccg ctgagtgcat ttcttgctta taacatgact ggttgaggac aataaagttc
     2281 ggtataccgg ctcaggcatc ggtcatgtag aaggcaatgc taaactggct cagcaaacta
     2341 agagcagcgc gcatccactt acccaatgcg gttgagaaaa tagccttcga tcgctttcat
     2401 gtggcgaaac aaccgggtga ggtggtggat aaaacccgcc agaatgaaca tccgcatctt
     2461 cctgttgaaa gtcgtcgtca
//
LOCUS       DADMJE010000277         2468 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.282, whole genome shotgun sequence.
ACCESSION   DADMJE010000277 DADMJE010000000
VERSION     DADMJE010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2468)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2468)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2468
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.282"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            128..1264
                     /gene="potA"
                     /locus_tag="JN001_004106"
     CDS             128..1264
                     /gene="potA"
                     /locus_tag="JN001_004106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter
                     ATP-binding protein PotA"
                     /protein_id="HAY9055114.1"
                     /translation="MGQSKKLNKQPSSLSPLVQLAGIRKCFDGKEVIPQLDLTINNGE
                     FLTLLGPSGCGKTTVLRLIAGLETVDSGRIMLDNEDITHVPAENRYVNTVFQSYALFP
                     HMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLETFAQRKPHQLSGGQQQRVAIAR
                     AVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRI
                     VVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNATVIERLDEQRVRANVEGREC
                     NIYVNFAVEPGQKLHVLLRPEDLRVEEINDDNHAEGLIGYVRERNYKGMTLESVVELE
                     NGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVLADEEHK"
     gene            1248..2111
                     /gene="potB"
                     /locus_tag="JN001_004107"
     CDS             1248..2111
                     /gene="potB"
                     /locus_tag="JN001_004107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309597.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine/putrescine ABC transporter permease
                     PotB"
                     /protein_id="HAY9055115.1"
                     /translation="MKNTSKFQNVVIVTIVGWLVLFVFLPNLMIIGTSFLTRDDASFV
                     KMVFTLDNYTRLLDPLYFEVLLHSLNMALIATLACLVLGYPFAWFLAKLPHKVRPLLL
                     FLLIVPFWTNSLIRIYGLKIFLSTKGYLNEFLLWLGVIDTPIRIMFTPSAVIIGLVYI
                     LLPFMVMPLYSSIEKLDKPLLEAARDLGASKLQTFIRIIIPLTMPGIIAGCLLVMLPA
                     MGLFYVSDLMGGAKNLLIGNVIKVQFLNIRDWPFGAATSITLTIVMGLMLLVYWRASR
                     LLNKKVSELDD"
     gene            complement(2343..2414)
                     /locus_tag="JN001_004108"
                     /pseudo
     CDS             complement(2343..2414)
                     /locus_tag="JN001_004108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001387760.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tail fiber assembly protein"
BASE COUNT          592 a          605 c          621 g          650 t
ORIGIN      
        1 ctaagccagt aattcacaac aaagattggc gattcaagcg gtttgccgta gaattaccgc
       61 cctcattaag agtcaccaag gtggttaacc acaaaccccg catcggtaag ccatccgttg
      121 cgtttacatg ggacagagta aaaaattgaa taaacaaccg agttcgcttt caccgctggt
      181 gcaattggcg ggaattcgca aatgctttga tggtaaagag gtcattcccc agctggatct
      241 gactatcaac aatggcgagt tcctcacgct gcttggccct tctggctgcg gtaaaacaac
      301 cgttcttcgc ctgattgcag gtctggaaac tgttgattcc ggacgcatca tgctggataa
      361 cgaggacatc acccacgttc cggcggaaaa ccgctatgtg aacactgttt tccaaagcta
      421 cgcacttttc ccccacatga ccgtgttcga aaatgtggcc tttgggttgc gcatgcaaaa
      481 aacccccgct gctgaaatta cgccccgcgt gatggaagcc ctgcggatgg tgcaactgga
      541 aaccttcgct caacgtaaac cgcatcagct ctctggtggt caacagcaac gcgtcgccat
      601 tgctcgcgcg gtggttaaca agcctcgtct gttgttgctg gatgagtcgc tctcagcgct
      661 ggattacaaa ctgcgtaagc aaatgcagaa cgagctgaaa gcgttacagc gtaagcttgg
      721 cattacattc gtcttcgtga ctcacgacca ggaagaagca ctcaccatgt cagacaggat
      781 tgtggtgatg cgcgagggtc gcattgagca agacggcacg ccgcgtgaaa tctacgaaga
      841 gccgaaaaac ctgtttgttg ccggcttcat tggcgaaatt aatatgttta acgccacggt
      901 gatcgagcga ctcgacgagc agcgcgtacg cgccaacgtt gaaggccgcg aatgtaatat
      961 ctacgttaac ttcgccgttg aaccggggca aaaactgcat gttctgctgc gcccggaaga
     1021 cttacgtgtt gaagagatta acgacgacaa ccacgctgaa gggctgattg gttacgttcg
     1081 tgagcgtaac tacaaaggca tgacgctgga gtcggttgtt gaactggaaa atggcaagat
     1141 ggtgatggtc agcgaattct tcaatgaaga cgatcctgac tttgaccact ctctcgacca
     1201 aaaaatggcc attaattggg tagaaagctg ggaggtcgta ctggctgatg aagaacacaa
     1261 gtaagttcca gaatgtagtg attgtcacta ttgtcggttg gcttgtgttg tttgtctttc
     1321 tgcccaacct gatgatcatt ggcaccagct ttttgacccg cgacgacgcc agtttcgtca
     1381 aaatggtctt tacgctggat aactacacgc gtctgctcga tccgctctat tttgaagtgc
     1441 tattgcactc gctgaatatg gcgctgatcg ccaccctcgc ctgcctggtg ctgggctatc
     1501 catttgcctg gtttctggcg aagctgccac acaaggtgcg tccgctgctg ctgtttctgc
     1561 tgattgttcc gttctggacc aactcattga ttcgtatcta cgggctgaaa attttcctca
     1621 gcaccaaagg ctatctcaac gagtttttgc tctggctggg cgttatcgac acaccaatcc
     1681 gtatcatgtt cacgcccagt gcggtgatta tcggtctggt ttacattctg ctgccgttta
     1741 tggtgatgcc gctgtactcc agtatcgaaa aactggataa gccgttgctt gaggcggcgc
     1801 gcgatctcgg tgccagcaag ttacagactt ttatccgcat cattattcca ctgacgatgc
     1861 cggggattat tgccggatgt ctgctggtga tgctgccagc gatgggcctg ttctatgtgt
     1921 ccgacctgat gggcggtgcg aaaaacctgc tgatcggtaa cgtcatcaag gtacagttcc
     1981 tcaatattcg tgactggccg tttggtgcag ccaccagcat tacgctgact atcgtaatgg
     2041 gcctgatgtt gctggtttac tggcgcgctt ctcgtttgct gaataagaag gtgagcgaat
     2101 tagatgatta atcatttata ttcaatgcat taagtttgtt tttgagtggt tttgccgttt
     2161 aaggtaacgg cgttatagat cctatcaaaa tcaatcaatt ccattctggt tttggcgaaa
     2221 gatttttcga gagcttcggt ctttaactaa aactgattgc gtataacccc aatacccctc
     2281 cccgactatc tgaattgtcg gggaggcact tcacgcacaa aatatcatcc ctgcgccgtt
     2341 gattactctg caggtgaagt cggccactca atatcaggtg cagttgatgt atcaacacgg
     2401 ttcagcaaca cctgaagtgg cacactgaat ttggccacct gaacagaggt gatatgctca
     2461 tctcagaa
//
LOCUS       DADMJE010000278         2444 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.283, whole genome shotgun sequence.
ACCESSION   DADMJE010000278 DADMJE010000000
VERSION     DADMJE010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2444)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2444)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2444
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.283"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..753)
                     /locus_tag="JN001_004109"
     CDS             complement(<1..753)
                     /locus_tag="JN001_004109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF968 domain-containing protein"
                     /protein_id="HAY9055116.1"
                     /translation="MRVLLRPVLVPELGLVVLKPGRESMPVFHNTRVLVEPEPKSMRN
                     LPSGVVPAVRQPLVEDKTLLPFFSNARVIRAAGGAGALSDWLLRHIKSCQWPHGDYHH
                     SETVIHRYGTGAMVLCWHCDNQLRDQTSESLEQLAHQNLSAWMIDVIGHAISGTQERE
                     LSLAELSWWAVRNQVADALPEAVLRRSLGLRAEKIRSMYRESDIVPGEQTATSILKQR
                     TKNLALLPHAHQQQNPPQEETVVSIAVDPESPA"
     gene            complement(755..1033)
                     /locus_tag="JN001_004110"
     CDS             complement(755..1033)
                     /locus_tag="JN001_004110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055117.1"
                     /translation="MAHDTKFYNSDNSAAPASRHGRRSHAFKSDWYQHDPCTEEQAEW
                     LIQRYRRHGYEIKKALSLDYRHWIIFVRLPYSERPPRPSCTFQQRIWR"
     gene            complement(1201..1413)
                     /locus_tag="JN001_004111"
     CDS             complement(1201..1413)
                     /locus_tag="JN001_004111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I toxin-antitoxin system Hok family toxin"
                     /protein_id="HAY9055118.1"
                     /translation="MLNTCRLASYVPKGKEKQAMKQQKAMLIALIVICLTVIVTALVT
                     RKDLCEVRIRTGQTEVAVFTAYEPEE"
     gene            complement(1616..1834)
                     /locus_tag="JN001_004112"
     CDS             complement(1616..1834)
                     /locus_tag="JN001_004112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055119.1"
                     /translation="MFKCYRTLIVGGIMKNALQFLFVAFWLFASCMPIIFTARYMEKI
                     DVLILMFGHINALFLGVFMAVMCIEYWR"
     gene            complement(2008..2343)
                     /locus_tag="JN001_004113"
     CDS             complement(2008..2343)
                     /locus_tag="JN001_004113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707879.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055120.1"
                     /translation="MARVEGELFKIARASLEAEPIAWRYRYVKKGVMDSQGELWVGDW
                     KYVPKKEDCNDRPNYEIQALFTAPPVPVTSEELVKAVHFYEQLKRENPPASGNQINGL
                     TMSVKRPAN"
BASE COUNT          578 a          639 c          573 g          654 t
ORIGIN      
        1 agccggagat tccggatcaa cggcaatgct gaccaccgtc tcttcctgtg gtggattctg
       61 ttgctggtgg gcgtgaggca gcagcgcaag attttttgtg cgctgcttca gtatgctggt
      121 ggcggtctgc tctcccggca cgatgtcgct ttcacggtac attgagcgga ttttttccgc
      181 acgcaacccc agcgaacgac gtaatactgc ttccggtagc gcgtccgcca cctgattgcg
      241 gaccgcccac caggataatt cagccagaga taattcacgc tcctgcgtac cgcttattgc
      301 gtgaccgatg acgtcaatca tccatgctga caggttttga tgagcaagtt gctcgagtga
      361 ttcggatgtc tggtcacgca actggttgtc gcagtgccag cacaacacca ttgcgccggt
      421 accataacgg tgaatgacgg tttcgctgtg atgataatcg ccgtgtggcc actggcagga
      481 tttaatatgg cgcaacagcc agtcagacaa tgcaccagca ccaccagcag cacgaatcac
      541 ccgtgcgtta ctgaaaaacg gcagcaatgt tttgtcttcc actagcggct ggcgaacggc
      601 aggaacgacc ccggacggca gattacgcat gcttttcggt tccggctcca ccagtacccg
      661 ggtattgtgg aataccggca tggattcacg gcctggctta aggaccacca gcccgagttc
      721 cggaaccaga acaggtcgaa gtaatacccg cacattacct ccagatccgt tgctggaatg
      781 tgcaggacgg acgcggtggc cgttcggaat aagggagcct gacgaagatt atccagtgac
      841 gataatcgag actgagggct ttcttaatct cgtatccgtg tctgcggtag cgctgaatca
      901 gccattcagc ctgttcttcg gtgcaggggt cgtgctgata ccagtcagat ttgaatgcat
      961 gagaacgccg cccgtgcctg ctggcaggcg cggcagagtt atccgaattg taaaatttgg
     1021 tatcgtgcgc catctgtttt ctctgctggc gcagcaggtg ccagttgttc aggctgacgg
     1081 atggattgta aaccagaacg accagaaaaa acaaaacccg ccgaagcggg ttaagtgcgg
     1141 gtgcgttgag gatgcctgac acatcagcgg tggcgaggga tttctccccc gccgggtctc
     1201 ttactcctca ggttcgtaag ctgtgaagac agcgacctcc gtctggccgg ttcggattcg
     1261 tacctcgcag aggtctttcc tcgttaccag tgccgtcact atgacggtta aacagatgac
     1321 gataagggcg attaacatcg ccttttgctg cttcatagcc tgcttctcct tgcctttcgg
     1381 cacgtaagag gctaacctac atgtgttcag catggattga gcctcagatt aatgttaagc
     1441 gtcttgcagg acgcgtagtg ttaactgggg cttttctcta tctgcctttt ggtgttcatg
     1501 cctgagacag atagcctcaa gcacccgcag tcattctact taactaagat ttccctgcaa
     1561 accgtttttg tccggcacag taaatatcca actaaaccaa tagcgttcgc tgtatttacc
     1621 gccagtattc aatgcacatg accgccatga acacccctaa aaaaagggca tttatatgtc
     1681 caaacattaa tatcaaaaca tcaatttttt ccatatacct tgctgtgaag atgatgggca
     1741 tacatgatgc gaacaaccag aacgcaacaa acaaaaactg caatgcgttt ttcattattc
     1801 cccctacaat caatgtgcga taacatttaa acacacctca atttggccgg acatataaat
     1861 atctaaacca gaaaaaatca cttacatagc gttacaaact ctttagtcta aatactcatc
     1921 gtaaaacatt ccccatactt atcagtccgt tccgcgccag gtagcttatt gccttatctg
     1981 gcaacctata atcaggtttc cgctttttca gttggctggt cgtttaaccg acatagttaa
     2041 cccattaatc tggttgccgg atgctggtgg attttcgcgt tttagttgtt cataaaagtg
     2101 cacagcttta accagttctt ctgatgtaac cgggactggt ggggcagtga ataaggcctg
     2161 aatttcatag ttcggcctgt cgttacaatc ctcttttttc ggtacatatt tccagtcacc
     2221 aacccacaac tccccctgag agtccataac accttttttc acgtagcgat atcgccacgc
     2281 tatcggctct gcttccagcg atgcccgtgc aattttgaat aactcgccct ctactcgcgc
     2341 catccctgaa ttggggtggc atttcgtaat cgctattttt aatttggctt cttcgattaa
     2401 ttgttctttt gttaattcag tcattttcat taccgccctt tcag
//
LOCUS       DADMJE010000279         2411 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.284, whole genome shotgun sequence.
ACCESSION   DADMJE010000279 DADMJE010000000
VERSION     DADMJE010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2411)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2411)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2411
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.284"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..447
                     /gene="yeeE"
                     /locus_tag="JN001_004114"
     CDS             <1..447
                     /gene="yeeE"
                     /locus_tag="JN001_004114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transport protein YeeE"
                     /protein_id="HAY9055121.1"
                     /translation="VLIGLIALLAWPLSEATGRMFGLGITSPTANILQFLVAGDVKYI
                     NWGVFLVLGIFVGSFIAAKASREFRVRAADAQTTLRSGLGGVLMGFGASIAGGCSIGN
                     GLVMTAMMTWQGWIGLVFMILGVWTASWLVYVRPQRKARLATAAAN"
     gene            461..688
                     /locus_tag="JN001_004115"
     CDS             461..688
                     /locus_tag="JN001_004115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfurtransferase TusA family protein"
                     /protein_id="HAY9055122.1"
                     /translation="MAIKKLDVVTQVCPFPLIEAKAALAEMASGDELVIEFDCTQATE
                     AIPQWAAEEGHAITDYQQIGDAAWSITVQKA"
     gene            complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JN001_004116"
     CDS             complement(731..2155)
                     /gene="sbcB"
                     /locus_tag="JN001_004116"
                     /EC_number="3.1.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease I"
                     /protein_id="HAY9055123.1"
                     /translation="MTDTDKQPTFLFHDYETFGTHPALDRPAQFAAIRTDSEFNVIGE
                     PEVFYCKPADDYLPQPGAVLITGITPQEARAKGENEAAFAARIHSLFTVPKTCILGYN
                     NVRFDDEVTRNVFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRPEGINWPENDDGL
                     PSFRLEHLTKANGIEHSNAHDAMADVYATIAMAKLVKTRQPRLFDYLFTHRNKHKLMA
                     LIDVPQMPPLVHVSGMFGAWRGNTSWVAPLAWHPENRNAVIMVDLAGDISPLLELDSD
                     TLRERLYTAKTDLGDNAAVPVKLVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLK
                     ILRENPQVREKVVAIFAEAEPFTPTDNVDAQLYNGFFSDADRAAMKIVLETEPRNLPA
                     LDITFVDKRIEKLLFNYRARNFPGTLDYAEQQRWLEHRRQVFTPEFLQGYADELQMLV
                     QQYADDKEKVALLKALWQYAEEIV"
BASE COUNT          581 a          575 c          621 g          634 t
ORIGIN      
        1 gtactcatcg gtttgattgc gcttttagcc tggcccctga gtgaagcaac cggacgcatg
       61 tttgggttag gaatcacttc cccaacggcc aatattctgc aatttctggt cgcgggtgac
      121 gtgaaataca ttaactgggg cgttttcctg gtgttaggga tcttcgtggg gtcatttatt
      181 gcagccaaag cgagccgtga gttccgcgtt cgcgcagctg atgcacaaac aacattacgt
      241 agcgggttag gtggtgtact gatgggcttc ggtgccagta ttgcaggtgg ttgctctatc
      301 ggtaatggac tggttatgac tgcaatgatg acctggcagg gctggattgg ccttgtattt
      361 atgattctcg gagtctggac tgcatcctgg cttgtgtatg ttcgaccgca gcgtaaggcg
      421 cgactggcga ctgctgcggc aaattaagta aggtgtaaag atggcgatta aaaagctgga
      481 tgtggtgacg caggtctgtc cgtttccact catagaagca aaagcagcac tggcagaaat
      541 ggccagcggc gatgagttgg taattgagtt tgattgcacc caggcaactg aagcaatccc
      601 acagtgggcg gcagaagaag gacatgccat caccgattat cagcagattg gcgatgcagc
      661 gtggagcatc accgttcaaa aagcctgact caacattgtc ctccgccgta ccagcggcgg
      721 aggcttcaaa ttagacgatc tcttccgcgt actgccaaag tgcttttaac agcgccactt
      781 tttctttgtc atcggcatat tgttgtacca gcatctgcaa ttcatcagca taaccctgca
      841 aaaactctgg cgtgaatacc tggcggcggt gctccagcca gcgttgctgc tcggcataat
      901 ccagcgtccc cgggaagttg cgtgcccgat aattgaacaa cagcttttca atccgtttat
      961 caacaaaagt gatatccagt gccggtaaat tacgtggctc ggtttccagc acaattttca
     1021 ttgctgcacg atctgcgtca ctgaaaaagc cgttataaag ctgtgcatcc acgttatctg
     1081 taggcgtaaa cggttcggct tccgcgaata tcgccaccac tttttcacgc acttgcggat
     1141 tttcacgcag aattttcagg ttatcgaggc aatgctgacg attaattccc agtcggtcgg
     1201 catcttccgg gcgtagcgta ttcgcctggg ccagcaccgg acatttattg atgtgcacca
     1261 gcttaaccgg aacggcggcg ttatcgccaa gatcggtttt tgcggtatat aaacgctcgc
     1321 gcaatgtgtc gctatccagt tccagtaatg gcgaaatgtc tcctgccaaa tccaccataa
     1381 ttacagcatt gcgattttca ggatgccacg ccagcggtgc cacccagctg gtattgccgc
     1441 gccatgcccc aaacattccg gaaacgtgaa ccaggggggg catctgcgga acatcaatca
     1501 acgccatcag tttgtgttta ttacgatggg taaagagata atcaaacagg cgtggctgac
     1561 gcgtttttac cagtttcgcc atcgcaatag tggcgtacac atcagccatc gcatcgtggg
     1621 cgttgctatg ttcaatacca ttcgctttgg ttaaatgctc aaggcgaaag ctcggtagac
     1681 cgtcatcatt ttcaggccag tttattcctt ccgggcgcag ggcataacag gcacgcataa
     1741 catccaacaa atcccagcgc gagttatcat gctgccagct ccaggcgtaa ggatcgtaga
     1801 aattacgata aaaaacgttg cgtgtgactt cgtcgtcgaa acgcacattg ttgtagccca
     1861 gaatacaggt cttcggtacg gtaaaaagcg agtgaatacg ggcggcaaac gcggcttcgt
     1921 tttctccttt cgcccgtgct tcctgcgggg taataccggt aattaatact gctccaggct
     1981 ggggtaaata gtcatccgcg ggcttgcagt aaaagacttc gggttcgccg atgacattga
     2041 attcgctatc ggtgcgaatg gctgcgaact gtgcagggcg atctaacgcg gggtgcgtgc
     2101 caaaggtttc gtaatcgtga aagaggaagg taggttgttt atctgtgtct gtcattgtct
     2161 agcattgtcc actgtagtta attaactgtc tgttataact cgaaaaacaa ccattttttc
     2221 acctgagtat gtctacgaac gtcaaatata gttgtttact gtgcgctgtt gtccatgtga
     2281 tattgtgtac cagatgtgta ccaaaccatt atttctgagc gtaccaaata ttatttatgg
     2341 ctataagcga cacaaaactg cgtagtattt atggtaaacc atattcgggc ccacaagaag
     2401 tggctgatgc c
//
LOCUS       DADMJE010000280         2369 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.285, whole genome shotgun sequence.
ACCESSION   DADMJE010000280 DADMJE010000000
VERSION     DADMJE010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2369)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2369)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2369
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.285"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..73)
                     /gene="csgC"
                     /locus_tag="JN001_004117"
     CDS             complement(<1..73)
                     /gene="csgC"
                     /locus_tag="JN001_004117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309448.1"
                     /note="involved in autoagglutination of curliated cells;
                     not involved in production of curli fibers; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli assembly protein CsgC"
                     /protein_id="HAY9055124.1"
                     /translation="MNALLLLAALSSQITFNTTQQGDV"
     gene            complement(132..587)
                     /locus_tag="JN001_004118"
     CDS             complement(132..587)
                     /locus_tag="JN001_004118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="major curlin subunit CsgA"
                     /protein_id="HAY9055125.1"
                     /translation="MKLLKVAAIAAIVFSGSALAGVVPQYGGGGNHGGGGNNSGPNSE
                     LNIYQYGGGNSALALQTDARNSDLTITQHGGGNGADVGQGSDDSSIDLTQRGFGNSAT
                     LDQWNGKNSEMTVKQFGGGNGAAVDQTASNSSVNVTQVGFGNNATAHQY"
     gene            complement(628..819)
                     /gene="csgB"
                     /locus_tag="JN001_004119"
                     /pseudo
     CDS             complement(628..819)
                     /gene="csgB"
                     /locus_tag="JN001_004119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309446.1"
                     /note="CsgB; functions as a nucleator in the assembly of
                     curli (coiled surface structures) on the cell surface;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="curlin minor subunit CsgB"
     gene            1598..2248
                     /gene="csgD"
                     /locus_tag="JN001_004120"
     CDS             1598..2248
                     /gene="csgD"
                     /locus_tag="JN001_004120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator CsgD"
                     /protein_id="HAY9055126.1"
                     /translation="MFNEVHSIHGHTLLLITKPSLQATALLQHLKQSLAITGKLHNIQ
                     RSLDDISSGSIILLDMMEADKKLIHYWQDTLSRKNNNIKILLLNTPEDYPYRDIENWP
                     HINGVFYSMEDQERVVNGLQGVLRGECYFTQKLASYLITHSGNYRYNSTESALLTHRE
                     KEILNKLRIGASNNEIARSLFISENTVKTHLYNLFKKIAVKNRTQAVSWANDNLRR"
     gene            2253..>2369
                     /locus_tag="JN001_004121"
     CDS             2253..>2369
                     /locus_tag="JN001_004121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="curli production assembly protein CsgE"
                     /protein_id="HAY9055127.1"
                     /translation="MKRYLRWIVAAEFLFAAGNLHAVEVEVPGLLTDHTVSSI"
BASE COUNT          679 a          512 c          473 g          705 t
ORIGIN      
        1 acacatcccc ttgctgggtc gtattaaagg ttatctgact ggaaagtgcc gcaaggagta
       61 ataacgcatt catattcttc tcccgaaaaa aaacagggct tgcgccctgt ttctgtaata
      121 caaatgatgt attagtactg atgagcggtc gcgttgttac caaagccaac ctgagtcacg
      181 ttgacggagg agttagatgc agtctggtca actgcagcac cgttgccacc accgaactgt
      241 ttaaccgtca tttcagaatt tttgccgttc cactgatcaa gagtagcgct attaccgaag
      301 ccacgttggg tcagatcgat tgagctgtca tctgagccct gaccaacatc tgcaccatta
      361 ccgccgccat gctgggtaat agtcaagtca gagttacggg catcagtttg cagagcaagt
      421 gcagagttac cgccaccgta ctggtaaatg ttcagctcag aatttgggcc gctattatta
      481 ccgccaccac cgtggttacc gccgccgccg tactgaggaa caacacctgc cagagcgcta
      541 ccggagaata cgattgctgc aattgctgct acttttaaaa gtttcatgta aaacccccat
      601 cggattgatt taaaagtcga atggaaatta acgttgtgtc acgcgaatag ccatttgcga
      661 ctgtctctgc actacaattg ccgttttttg agtaccatac tgtgtaatat ttgctttatt
      721 accagaacct ttctggataa tcatcgcagt attaccataa gcaccttgcg aaatactggc
      781 atcgttggca ctgcccgcct gatcaatata tgcaaggtta ttagactggc cccctgaatc
      841 tccagacaac cagtatcact taaataagtg atactggttg tctggagatt cagggggcca
      901 gtctacgcaa cctgtatttt gttaacgctg cgttatgatg gaaagtatgt ctgcggaaat
      961 atttttaata actcacccgc gcgttgtatt tttctttttt tgttcatacc aaagtattaa
     1021 aacccacgta aatacgctgt tatctacgca aaaaatattt tgttttcttt taaatctccg
     1081 ttttccgcta tcaaaaatca ccagacagtc atttttcttg cccgtcgctg attgctgcga
     1141 tatgtcttgc gcacaagccg tgacaaacct cgtctttttg gagtaaaaat ttgtccacgg
     1201 aggtgcggag aaaaaacaag aacgttttac atgacgaaag gactacacca aaatattttt
     1261 tatatgtatt attagtaagt tatcaccatt tgtatgattt tttaaaattg tgcaataaaa
     1321 accaaatgta caacttttct atcatttcta aacttaataa aaccttaagg ttaatatttt
     1381 aatataacaa gttacattta gttacatgtt taacacttga tttaagtttt gtaatggcta
     1441 gattgaaatc agatgtaatc cattagtttt atattttacc catttagggc tgatttatta
     1501 ctacacacag cagtgcaaca tctgtcagta cttctggtgc ttctatttta gaggcagctg
     1561 tcaggtgtgc gatcaataaa aaaagcgggg tttcatcatg tttaatgaag tccatagtat
     1621 tcatggtcat acattattgt tgatcactaa accttctttg caggcgacag ctctcttgca
     1681 gcaccttaaa caatcgctgg caattacagg aaaattacat aatattcaac gttctctgga
     1741 cgatatctct tcaggctcta ttattcttct ggatatgatg gaagcagata aaaagcttat
     1801 ccattattgg caggatactt tgagcaggaa aaacaacaat atcaaaatat tgttgctaaa
     1861 tacgcctgaa gattacccgt accgcgacat tgaaaactgg cctcatatca acggcgtttt
     1921 ttattccatg gaggatcaag aacgtgttgt caatgggttg caaggcgtcc tgcgcggcga
     1981 atgctacttt acgcaaaagc ttgccagcta cttgattacg cattcaggta actatcgtta
     2041 taacagcacg gaatcagccc tccttactca tcgggaaaaa gagatcctga ataagctgcg
     2101 tatcggcgcg tctaataacg agatcgctcg ttcgttgttc atcagcgaaa atacggttaa
     2161 aacgcatctt tataatcttt tcaagaagat agccgtaaaa aaccggacac aagcggtttc
     2221 ctgggcaaac gataacctca ggcgataaag ccatgaaacg ttatttacgc tggattgtgg
     2281 cggcagaatt tctgttcgcc gcagggaatc ttcacgccgt tgaggtagaa gtcccgggat
     2341 tgctaactga ccatactgtt tcatctatt
//
LOCUS       DADMJE010000281         2360 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.286, whole genome shotgun sequence.
ACCESSION   DADMJE010000281 DADMJE010000000
VERSION     DADMJE010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.286"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            763..2271
                     /gene="ltrA"
                     /locus_tag="JN001_004122"
     CDS             763..2271
                     /gene="ltrA"
                     /locus_tag="JN001_004122"
                     /EC_number="2.7.7.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_708749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="group II intron reverse transcriptase/maturase"
                     /protein_id="HAY9055128.1"
                     /translation="MQRKLATWAATDPSLRIQRLLRLITQPEWLAEAARITLSSKGAH
                     TPGVDGVNKTMLQARLAVELQILRDELLSGHYQPLPARRVYIPKSNGKLRPLGIPALR
                     DRIVQRAMLMAMEPIWESDFHTLSYGFRPERSVHHAIRTVKLQLTDCGETRGRWVIEG
                     DLSSYFDTVHHRLLMKAVRRRISDARFMTLLWKTIKAGHIDVGLFRAASEGVPQGGVI
                     SPLLSNIMLNEFDQYLHERYLSGKARKDRWYWNNSIQRGRSTAVRENWQWKPAVAYCR
                     YADDFVLIVKGTKAQAEAIREECRGVLEGSLKLRLNMDKTKITHVNDGFIFLGHRIIR
                     KRSRYGEMRVISTIPQEKARNFAASLTALLSGNYSESKVDMAEQLNRKLKGWAMFYQF
                     VDFKAKVFSYIDRVVFWKLAHWLARKYRTGIASLMRWWCKSPKPGQSKTWVLFGKTNH
                     GKLSGEILYRLVGQGKKLFRWRLPEGNPYLRTETRNTYTSRFTEVAMAFASI"
BASE COUNT          600 a          582 c          694 g          484 t
ORIGIN      
        1 ggtcatgagc acgttgctat cccgaatcat cttgagcgac agttcgccgt aacggaacca
       61 aatcaggtgt ggtgcggtga tgtgacctat agtgtgcccg gagttcaggg cgggcatgga
      121 tgcttaaatg aaccgcgagt ctgtctggaa tattgaaccg gtaactcacg atgagaaacc
      181 caacaatccc accgggtgtg acggtggaga acctgagcgg cagtgacctg cggcatgccc
      241 gcagggtgat gtaacccgct gacaacgggg attgaggcga gatcactaag ccgagatgat
      301 cctcaaggtt aagtactgaa aggctgaaga acatgaaccc gttaatccgc ctctgtgggt
      361 tgaaaacgtc accacggcct acgtgatctg acaggccgtg caggaggaac tggcagtgat
      421 acgtaagcac tgccggtcga aggtgttttg acatgtatgc gaaacaccgg ggcagcagcg
      481 tctatcacgc ttgcgttgct gacttctgcc aacttgcggc aagcaaggat aaagagtgcg
      541 acgggcagcc tcctcagtat gcctgagtcc aggcaggtaa accggggaag gtcagcgacg
      601 gatgttaagg gggcatggct ccgatgacgc gctggctggc ggagcttccg tagtagtccg
      661 cgatggggaa agcccattac atggcgaagg gaagcagttt gaatgtgttt gcgacgtgaa
      721 ttaactgacc taacgaggtg aagacctttg ataatcagcg aaatgcaacg caagcttgcc
      781 acatgggcag ccaccgatcc gtccctacgg attcaacggc tgctgcgtct aataacacaa
      841 ccagaatggc tggctgaagc ggcgcggatc acgctttcat caaagggggc ccataccccc
      901 ggcgttgatg gcgtgaacaa aacaatgcta caggccagac tggctgttga gctgcaaatc
      961 ctcagggatg aattactctc aggccactac cagcccttgc ccgcaagacg ggtttacatc
     1021 cctaaaagca acggcaaact gcgaccactg ggtatccccg cgttgcggga tcgtattgtt
     1081 cagcgggcca tgctgatggc gatggagccg atatgggaga gtgattttca tacgctctca
     1141 tatggcttcc ggcctgagcg cagtgtccac cacgcgatcc gcacggtgaa attacagctc
     1201 acagactgcg gtgaaacccg gggacgctgg gtgattgaag gcgacctgtc cagttacttc
     1261 gacaccgtac atcatcgact gctgatgaag gctgtacgcc gcaggatcag tgacgcacgt
     1321 ttcatgactc tgctgtggaa aaccatcaag gcgggacata tcgatgtcgg tctctttcgg
     1381 gcggccagtg aaggtgtgcc acagggcggt gttatatcgc cgctattatc gaacatcatg
     1441 ctgaatgagt tcgatcaata cctgcatgag cgctacctga gcgggaaagc cagaaaagat
     1501 cggtggtact ggaataacag tatccaacgg ggccgaagta cggcggtcag agaaaactgg
     1561 cagtggaaac ccgcggtggc gtactgccgc tatgccgatg attttgtcct catcgtcaaa
     1621 ggcaccaaag cacaggcgga agccatcagg gaggagtgtc ggggtgtgct cgaaggcagt
     1681 ctgaaactca ggctgaacat ggataagact aaaatcaccc atgttaatga cggctttatc
     1741 tttctggggc acaggatcat tcgcaaacgc agtcgttatg gcgagatgcg agtgatctca
     1801 acgatcccgc aggagaaagc cagaaacttc gccgcatcgc tgacagcact gttatcaggc
     1861 aactacagtg aaagcaaagt cgatatggct gaacaactca accgaaaact gaaaggctgg
     1921 gccatgttct atcagttcgt tgattttaag gccaaagtct tcagttatat cgaccgtgtc
     1981 gtgttctgga agctggctca ctggctggcc cgcaaatacc gtacaggtat cgcttccctg
     2041 atgaggtggt ggtgtaaatc accgaaaccg ggtcagagca aaacgtgggt tttatttggt
     2101 aaaaccaatc acggcaagct cagcggcgaa atactgtacc ggttggtggg gcaaggcaag
     2161 aagctgttcc gctggcggct acccgaaggt aatccctatc tgaggacgga gaccagaaac
     2221 acgtatacat cgcgctttac agaagtggca atggcgttcg ccagcattta aatggagagc
     2281 cggatgcgct gaaaggtgca cgtccggttc ggggaggaga ggcagggaaa tagtccgact
     2341 acgccctgcc tcttactcta
//
LOCUS       DADMJE010000282         2325 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.287, whole genome shotgun sequence.
ACCESSION   DADMJE010000282 DADMJE010000000
VERSION     DADMJE010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2325
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.287"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..465
                     /locus_tag="JN001_004123"
     CDS             <1..465
                     /locus_tag="JN001_004123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014837283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055129.1"
                     /translation="LPISAADKRRFYYYFQEKNTPNIERFFVFDSSEYRYALNMREVV
                     FHQFLSDGLRPIVDEDDDAYEDDYFNVHITLVNGGPVIPLSVEPDAPQNEETDDIGQL
                     NAFFDALDCEPETTDRFMITDEDGEDAFIRIGSIAMVRVALDVLEPVEDDDE"
     gene            712..1977
                     /locus_tag="JN001_004124"
     CDS             712..1977
                     /locus_tag="JN001_004124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001642584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HAY9055130.1"
                     /translation="MALTDIKVRAAKPTDKQYKLTDGGGMHLLVHPNGSKYWRLQYRY
                     EGKQKMLALGVYPEITLADARVRRDEARNLLANGVDPGDKKKNDKVEQSKARTFKEVA
                     IEWHGTNKKWSEDHAHRVLKSLEDNLFAALGERNIAELKTRDLLAPIKAVEMSGRLEV
                     AARLQQRTTAIMRYAVQSGLIDYNPAQEMAGAVASCNRQHRPALELKRIPELLTKIDS
                     YTGRPLTRWAIELTLLIFIRSSELRFARWSEIDFEASIWTIPPEREPIPGVKHSHRGS
                     KMRTTHLVPLSTQALAILKQIKQFYGAHDLIFIGDHDSHKPMSENTVNSALRVMGYDT
                     KVEVCGHGFRTMACSSLVESGLWSRDAVERQMSHMERNSVRAAYIHKAEHLEERRLML
                     QWWADFLDVNRERFISPFEYAKINNPLKQ"
BASE COUNT          660 a          452 c          568 g          645 t
ORIGIN      
        1 ttgcccattt cagcagcgga taagcggagg ttttattatt attttcagga aaaaaacacc
       61 ccaaacatag aacgcttctt cgtttttgat tcttccgagt atcgttatgc gttaaatatg
      121 cgtgaagtgg tatttcatca gttcctttct gatggtctgc ggccaatcgt tgacgaagac
      181 gatgatgcct acgaagacga ttattttaat gtccatatca cgctggtaaa cggcggacca
      241 gtgattccac tgagtgttga gccagatgcg ccgcaaaacg aagagacgga tgatatcggc
      301 cagttgaatg cattttttga cgcgctggat tgcgagcctg aaaccacgga tcgttttatg
      361 ataaccgacg aagatggaga agatgctttc attcgtattg gttctatcgc tatggtgcga
      421 gttgcgcttg atgtgctgga accagtggaa gacgatgatg agtagtattg aatggattga
      481 tttcatattg ttgagtctgg aatcgcggtg cggccttcgg caccaaaagt atgtaaatag
      541 acctcaactg aggtcttttt ttatgcctga aatccagtgt ttatctatct ttcccgctat
      601 attaactctc tcaaggtcaa ccgatatcaa cgtacatcta ccaacatatg ttggtacaga
      661 tgatggtatt tccggttcga taatgcttgt accaacaggg agggaatacg catggcatta
      721 acagatatca aagtcagagc agccaagcca acggataagc aatataagct gactgatggt
      781 ggcggtatgc atctgcttgt ccatccaaat ggttctaagt actggcgttt gcagtaccgt
      841 tatgagggaa agcaaaaaat gctggcactt ggggtttatc ctgaaatcac actagcggat
      901 gccagagtac gtcgtgacga ggcgcgtaac ctgcttgcga atggcgtcga tccgggagac
      961 aaaaagaaaa atgataaggt tgaacagagt aaagcacgaa cctttaaaga agtcgcgatt
     1021 gagtggcatg gcaccaataa aaagtggtct gaagatcacg cccatcgtgt gctaaaaagt
     1081 cttgaagata atctttttgc agcgcttggt gaacgtaata tcgctgagtt aaaaactcga
     1141 gatttattag cacctattaa ggccgtagaa atgtctggac gtcttgaagt ggccgctcgt
     1201 cttcagcagc gcactacagc catcatgcgc tatgcagtgc aaagtgggtt aattgattat
     1261 aacccggcac aagagatggc tggggcggtt gcttcctgta atcgacaaca tcgtcccgcg
     1321 cttgaattaa agcgcatccc tgagttgctt acaaaaatag atagctatac tggtaggccg
     1381 ctaacccgat gggcgataga actcactttg ctgatcttta ttcggtccag tgagctgcgt
     1441 tttgctcgtt ggtcagagat cgatttcgaa gcgtctatat ggactatccc accggagcgg
     1501 gagcctattc ctggagtgaa acattcccat agaggctcaa aaatgcgtac aactcatcta
     1561 gtgcctcttt caacgcaagc tcttgcaatt ttaaagcaga taaaacagtt ttatggggcc
     1621 catgacttga tatttattgg tgatcacgat tcgcacaaac ccatgagtga gaatacggta
     1681 aatagtgcgt tacgggtcat ggggtatgat acaaaagtag aggtttgtgg tcatggcttt
     1741 cgaacaatgg cctgtagttc attggtcgaa tcaggtttgt ggtctcgtga tgctgttgaa
     1801 cgtcagatga gccacatgga gcgaaattca gtgagggccg cgtatatcca taaagcagag
     1861 catctggaag aacggcgatt gatgctacag tggtgggccg attttctgga tgtaaacaga
     1921 gaaagattta tcagtccatt tgaatatgca aagattaata atccattaaa acagtaatca
     1981 tcccgggcaa atgcccggga attattctag gattattttc tttgttaaaa aagacaaacg
     2041 gtattaactg atgtatttac tatttaccgc tccctgcagg ggggattatc agaatccgcg
     2101 gttattcatt atttatatac tttcaataaa aaagtaacct cataaaaaat cctgtactca
     2161 cagggtgatg cgggataact gacgtaagga gtgctgcagg gatttgatgg tcccttgtgc
     2221 tgatatgaat acggatattt tatacagaat acttttcagt acaagcgact gtattacagt
     2281 ctgccatata tgattacctg tgatcaggaa gaataagtgg ctgag
//
LOCUS       DADMJE010000283         2281 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.288, whole genome shotgun sequence.
ACCESSION   DADMJE010000283 DADMJE010000000
VERSION     DADMJE010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2281)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2281)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2281
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.288"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..184
                     /locus_tag="JN001_004125"
     CDS             <1..184
                     /locus_tag="JN001_004125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY9055131.1"
                     /translation="IYQPVYSPWVNHVERLWQALHDTITRNHQCRSMWQLLKKVRHFM
                     ETVSPFPGGKHGLAKV"
     gene            complement(204..455)
                     /locus_tag="JN001_004126"
     CDS             complement(204..455)
                     /locus_tag="JN001_004126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001119656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055132.1"
                     /translation="MPGTTTAMSINFIGITARTMNSNGSHGKPQIPVDYQKLLSIEDI
                     TFCRNRWGNIGENALRRVAVGKKLSFFGSDRGGENAAII"
     gene            378..1067
                     /locus_tag="JN001_004127"
                     /pseudo
     CDS             378..1067
                     /locus_tag="JN001_004127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
     gene            complement(1084..1263)
                     /locus_tag="JN001_004128"
                     /pseudo
     CDS             complement(1084..1263)
                     /locus_tag="JN001_004128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            1593..>2281
                     /gene="ipaH7.8"
                     /locus_tag="JN001_004129"
     CDS             1593..>2281
                     /gene="ipaH7.8"
                     /locus_tag="JN001_004129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH7.8"
                     /protein_id="HAY9055133.1"
                     /translation="MFSVNNTHSSVSCSPSINSNSTSNEHYLRILTEWEKNSSPGEER
                     GIAFNRLSQCFQNQEAVLNLSDLNLTSLPELPKHISALIVENNKLTSLPKLPAFLKEL
                     NADNNRLSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLK
                     FLHVYYNRLTTLPDLPDKLEILCAQRNNLVTFPQFSDRNNIRQKEYYFHFNQITTLPE
                     SFSQLDSSYRI"
BASE COUNT          676 a          513 c          429 g          663 t
ORIGIN      
        1 catttatcag ccggtttact cgccatgggt gaatcatgtt gaacggctat ggcaggcact
       61 tcacgacaca ataacgcgta atcatcagtg ccgctcaatg tggcaactgt tgaaaaaagt
      121 tcgccatttt atggaaaccg tcagcccatt ccccggaggc aaacatgggc tggcaaaagt
      181 gtagcggtat taagcgcagc tatttagatt attgccgcat tttctccacc acgatcagag
      241 ccgaaaaaag ataatttttt tccaactgcc acccggcgta atgcgttttc accaatgtta
      301 ccccacctat tgcggcaaaa ggtaatgtct tcaatcgata gaagtttctg gtaatctact
      361 ggtatttgag gttttccatg actaccgtta ctgttcattg tccgcgctgt aattccgatg
      421 aagtttatcg acatggccgt agttgttccc ggcatgagcg tttccgttgt cgctcatgta
      481 aacgtgtttt ccagctcact tactcttatg aagccagaaa actcggcgtt aaggagcaga
      541 tcgttgaaat ggcacataac ggcgcagggg gctgttatac cgccagaaca ctgaaaatcg
      601 gcatcaatac cgtcatacgg acattaaaaa gctctcgccc cggcggataa catctgcgcc
      661 agtcgctcac gctgatgttg cccttatctg tgaacttgat gagcagtggc gcttcgttgg
      721 cagcaaggcg caacaacact ggccctggta tgcgtacaac actaaaactg gggtgtgttg
      781 gcttacactt gcgggccacg gaatgatgag acctgtcggg aactgttagc cctgttgact
      841 ccgttctgta tcggcatggt gaccagcgat gactggggca gctacgccag agaagtgccg
      901 gaggagaaac acctgaccgg caaaatcttc acgcaacgta tgaacgtaac aacctgaccc
      961 tccgcccccg catcaagcgg ctggcacgta aaacaatctg cttctcgcgt tccgtggaaa
     1021 tccacgaaaa agtcatcggt tccttcattg aaaagcacat attctaatga ttggaagtac
     1081 tacccggcaa aactcattca gtgcattcca gtgattcagg atatagttga acgcctttac
     1141 catttcagca tggtttgaca aagttttcct ctggagcttt atccagtcat acaaggactt
     1201 cattcgcggc acacatttct cctgccttac cgcaagccgt ttttctgccg gcctccctcg
     1261 tattaaatgt gtatcgtttt tttacagtaa ttttaattta tcattctata ataggaataa
     1321 atgagcttgg ctaaaatatg atataaaaca aatatactta ctcggattac atttccttgc
     1381 tcactggaat gttgaattca gtgttattat tgactgcagt cacaataaaa aaaagaattc
     1441 catagaaaac ctcaacaaat aaattacaac taacttctgt tatgtgtaaa atggaaacta
     1501 ttaaaactta atatcgaaaa tggtaagtga aatttgtata aatatacaat tttaaatatt
     1561 tattctcaca aatataaggt tgccctagca ttatgttctc tgtaaataat acacactcat
     1621 cagtttcttg ctccccctct attaactcaa actcaaccag taatgaacat tatctgagaa
     1681 tcctgactga atgggaaaag aactcttctc ccggggaaga gcgaggcatt gcttttaaca
     1741 gactctccca gtgctttcag aatcaagaag cagtattaaa tttatcagac ctaaatttga
     1801 cgtctcttcc cgaattacca aagcatattt ctgctttgat tgtagaaaat aataaattaa
     1861 catcattgcc aaagctgcct gcatttctca aagaacttaa tgctgataat aacaggcttt
     1921 ctgtgatacc agaacttcct gagtcattaa caactttaag tgttcgttct aatcaactgg
     1981 aaaaccttcc tgttttgcca aaccatttaa catcattatt tgttgaaaat aacaggctat
     2041 ataatttacc ggctcttccc gaaaaattga aatttttaca tgtttattat aacaggctga
     2101 caacattacc cgacttaccg gataaactgg aaattctctg tgctcagcgc aataatctgg
     2161 ttacttttcc tcaattttct gatagaaaca atatcagaca aaaggaatat tattttcatt
     2221 ttaatcagat aaccactctt ccggagagtt tttcacaatt agattcaagt tacaggatta
     2281 a
//
LOCUS       DADMJE010000284         2276 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.289, whole genome shotgun sequence.
ACCESSION   DADMJE010000284 DADMJE010000000
VERSION     DADMJE010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.289"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..350)
                     /locus_tag="JN001_004130"
     CDS             complement(<1..350)
                     /locus_tag="JN001_004130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inhibitor of g-type lysozyme"
                     /protein_id="HAY9055134.1"
                     /translation="MKIKSISKAVLLFALLTSTSFAAGKNVNVEFRKGHSSAQYSGEI
                     KGYDYDTYTFYAKKGQKVHVSISNEGADTYLFGPGIDDSVDLSRYSPELDSHGQYSLP
                     ASGKYELRVLQTRN"
     gene            592..885
                     /locus_tag="JN001_004131"
     CDS             592..885
                     /locus_tag="JN001_004131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309701.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055135.1"
                     /translation="MFCVIYRSSKRDQTYLYVEKKDDFSRVPEELMKGFGQPQLAMIL
                     PLDGRKKLVNADIEKVKLALTEQGYYLQLPPPPEDLLKQHLSVMGQKTDDTNK"
     gene            957..1616
                     /locus_tag="JN001_004132"
     CDS             957..1616
                     /locus_tag="JN001_004132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HAY9055136.1"
                     /translation="MYQHHNWQGALLDYPVSKVVCVGSNYAKHIKEMGSAVPEEPVLF
                     IKPETALCDLRQPLAIPSDFGSVHHEVELAVLIGATLRQATEEHVRKAIAGYGVALDL
                     TLRDVQGKMKKAGQPWEKAKAFDNSCPLSGFIPAAEFTGDPQNTTLGLSVNGEQRQQG
                     TTADMIHKIVPLIAYMSKFFTLKAGDVVLTGTPDGVGPLQSGDELTVTFDGHSLTTRV
                     L"
     gene            1693..2154
                     /locus_tag="JN001_004133"
     CDS             1693..2154
                     /locus_tag="JN001_004133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415699.5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HAY9055137.1"
                     /translation="MAEHLMNDVPFWQSKTLDEMSDAEWESLCDGCGQCCLHKLMDED
                     TDEIYFTNVACRQLNIKTCQCRNYERRFEFEPDCIKLTRENLPTFEWLPMTCAYRLLA
                     EGKDLPVWHPLLTGSKAAMHGERISVRHIAVKESEVIDWQDHILNKPDWAQ"
BASE COUNT          592 a          491 c          587 g          606 t
ORIGIN      
        1 tcgtttcggg tttgcagcac tcgcagctca tatttgccag aagcagggag tgagtattgt
       61 ccgtgactat cgagttctgg ggaatatctg gataaatcaa cagaatcatc gattcctggc
      121 ccgaagaggt aagtatcagc gccttcatta gagatactca catgtacttt ctgacctttt
      181 ttggcataga aggtatatgt atcgtaatcg tatcccttta tttcgccgga gtactgagcg
      241 ctgctatggc cttttctgaa ctcaacattg acattcttac ccgcagcaaa gctcgtggag
      301 gttagcagtg caaacagcaa tacagcctta ctgatgctct tgattttcat tggtagtctc
      361 ctgttcagaa tgagtacgat gaactgttat aatataacaa tccctaacgg gagaattcca
      421 gtggcttttc tgcgttcggt aaaatcccgg cgcggcattt tttgccgggg ggattactta
      481 taaaggggca tggactcaac aaaccgcaga aatctacagc tggctggctt gtggcgcggg
      541 tttcattgat gttagcttat gccaaaacct ggcatcttaa agagtaaaag tatgttttgt
      601 gtgatttatc gaagcagcaa gcgtgaccag acctatttat atgtcgaaaa aaaagacgat
      661 ttttcgcgtg ttcctgagga actgatgaaa ggttttggtc agcctcagtt agcgatgatt
      721 ctgccgttgg atgggcggaa gaaactggtc aatgctgata ttgaaaaggt taaactggca
      781 ttaaccgagc aaggttacta tttgcagtta ccgccaccac ccgaagattt gctgaagcaa
      841 catctttccg tcatggggca gaaaacagac gacacgaaca aataaccgat atccggcggt
      901 ggcattatct ttgtcggcgc gggttttcat atccacgata aggtgagggg aacgttatgt
      961 atcaacatca caactggcaa ggtgcgctgc tggattatcc ggtgagtaaa gtagtctgtg
     1021 ttggcagtaa ctatgccaaa catattaaag agatgggcag cgcagtgccc gaagagccag
     1081 tgctgtttat taaaccagaa acggcactgt gcgatctgcg gcagccattg gcgatcccat
     1141 ccgatttcgg ttcagttcat catgaagtcg aactggcggt gttgattggt gcgacgctgc
     1201 gtcaggcaac ggaagagcat gtccgcaaag ccattgccgg ttacggcgtg gcgcttgatc
     1261 tgacattgcg tgatgttcag ggaaaaatga agaaagccgg gcagccgtgg gaaaaggcta
     1321 aagcgtttga taactcttgt ccgctttccg ggtttatccc cgcggcggaa tttaccggcg
     1381 atccacaaaa tacaacgctg ggcctgagcg taaacggcga acaacgccag caaggtacga
     1441 ctgcggacat gatccataaa atcgttccgt tgatcgctta tatgagcaag ttttttaccc
     1501 tcaaggccgg tgacgttgtg ttgacaggca cgcctgatgg cgtcggcccg ttgcaaagcg
     1561 gtgatgagct gacagtcact ttcgatgggc attctttgac aactcgcgtt ttgtaatact
     1621 ttttgccgcc tgaaagcggc ggcaaaactt gcatcgctgt gccagactgg ttataaggtg
     1681 cgttttaacg taatggcgga acacctgatg aacgatgtac ctttctggca aagtaaaacc
     1741 ctggacgaaa tgagcgatgc ggaatgggag tcgttgtgtg atggttgcgg tcagtgttgc
     1801 ctgcataaac tgatggatga agacaccgac gaaatctact tcactaacgt cgcctgtcgc
     1861 cagctcaata ttaaaacctg tcaatgtcgg aactacgaac gtcgtttcga gtttgaaccc
     1921 gactgcatta aattaacccg tgaaaatctg ccaacattcg aatggctgcc aatgacctgc
     1981 gcttatcgtt tgctggcgga aggtaaagat ttacctgtgt ggcatccgct acttactggt
     2041 tcgaaagcgg caatgcatgg tgaacgtatc tctgtgcgtc atatcgcagt gaaagaatca
     2101 gaagtgattg actggcagga tcatatctta aataaacctg actgggcgca gtgataaatt
     2161 taatagatgt tgatgggggc tttcttaata tacgtctgga tgctcgccat ttcgtagccc
     2221 tgtttttgaa agcgctctgt cataatgaga gttacccgat accttattat caacag
//
LOCUS       DADMJE010000285         2260 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.290, whole genome shotgun sequence.
ACCESSION   DADMJE010000285 DADMJE010000000
VERSION     DADMJE010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2260
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.290"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            111..432
                     /locus_tag="JN001_004134"
                     /pseudo
     CDS             111..432
                     /locus_tag="JN001_004134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001232281.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(466..672)
                     /locus_tag="JN001_004135"
     CDS             complement(466..672)
                     /locus_tag="JN001_004135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001570270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055138.1"
                     /translation="MTVSYKITYEHRDGDQIRMEEVLFHSEHEPTKDEIHDAVRKDTV
                     RFNSPSNGVTAVSGFKVISVVPVP"
     gene            complement(1170..1243)
                     /locus_tag="JN001_004136"
     tRNA            complement(1170..1243)
                     /locus_tag="JN001_004136"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1209..1211),aa:Gly,seq:ccc)
     gene            complement(1322..2077)
                     /locus_tag="JN001_004137"
     CDS             complement(1322..2077)
                     /locus_tag="JN001_004137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_311765.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HAY9055139.1"
                     /translation="MSAGRLNKKSLGIVMLLSVGLLLAGCSGSKSSDTGTYSGSVYTV
                     KRGDTLYRISRTTGTSVKELARLNGISPPYTIEVGQKLKLGGAKSSSSTRKSTAKSTT
                     KTASVTPSSAVPKSSWPPVGQRCWLWPTTGKVIMPYSTADGGNKGIDISAPRGTPIYA
                     AGAGKVVYVGNQLRGYGNLIMIKHSEDYITAYAHNDTMLVNNGQSVKTGQKIATMGST
                     DAASVRLHFQIRYRATAIDPLRYLPPQGSKPKC"
BASE COUNT          603 a          530 c          491 g          636 t
ORIGIN      
        1 tcatacacta aatcagtaag ttggcagcat taccaatttt gctaagttaa tgcattaatc
       61 taaaaacgct ttaaatcaat acataaccat tatctcttgg gattatttac atgcgcaaaa
      121 gtttaatgct gttacttgct tcaacattga ttatttctgg atgtgcaaca aaaaaacaac
      181 tcgttccaac tggtggaagc aaatcagacg gcacagttag gatgagttat tcttacggta
      241 tgtttgaaag tcctgttgta gatccacaac aaggcatgaa tgcagccaaa gcgcgttgtg
      301 ccgcttaggg gatattcagg agccgagcct tttggtggat tcacttctca atgttcacaa
      361 ccttcttcat ctggttgtat gcaaacactt gtgactatcg aatatcaatg cactggcgat
      421 attaagaagt aataattagg ggcttccagc cccttctata accattcatg gaacagggac
      481 aaccgaaatc actttaaacc ctgaaacagc cgttactcca ttagatggag aattaaatct
      541 cacagtatct tttcttactg catcatgaat ttcatctttt gttggttcat gctctgaatg
      601 gaataaaacc tcttccattc taatttgatc accgtctcta tgctcataag taatcttgta
      661 gctaacagtc atatcaacct catgcagggg aattgtgaga ttattataga caatagaaac
      721 cataaagccc cgttggtgat acagcaacaa gcgggagcgt agcgacttca tcagattgtc
      781 agaaagatca caccttatca ggataaccgt gtacccgttg ggagcgtggc tgaaacgctg
      841 atagagcttg catatggttt gcaaggacca atatcaccat aaacctgttt acgcagccac
      901 aaggccgcac atcgggctta aatgcgtgtg ttcagtctgt cgatgacatt acaatgccag
      961 gatgggcttt atcttcacgt tgtgctatcg cggtgtgaga ggtgcaactg ccgccaacgt
     1021 taggttatac tgtcatctca ccgtgtaact taacgtgaca gttactaagg gcggatcaca
     1081 atggtagaac tcctaagcaa attaaatagg taactgttta agttgctgac agagaagact
     1141 tttttagtct tctccacctg gggagattct ggagcgggcg aagggaatcg aaccctcgta
     1201 tagagcttgg gaagctctcg ttctaccatt gaactacgcc cgcttcgaga tgcgtaaggc
     1261 attataaacc ttacgctctc cttagcaagt gccgcgctgc tgactgctga ttaattcgcc
     1321 atcagcattt tggcttgctg ccctgcggcg gcaagtaacg tagcggatca attgccgttg
     1381 cacggtaacg aatctggaaa tgcaggcgaa cagatgccgc atccgtgctc cccatagtgg
     1441 cgattttttg cccagtcttc acgctttgcc cattatttac cagcatcgtg tcattatggg
     1501 cgtaagccgt aatgtaatct tcactgtgtt taatcatgat gagattaccg tagccacgca
     1561 gctggttgcc cacatacacc acctttcctg cacccgcggc gtaaataggt gtaccccgtg
     1621 gagctgagat atcaatccct ttattgccgc catctgctgt cgaatacggc atgataactt
     1681 tccctgtcgt tggccataac caacaacgtt gccctactgg cggccaggaa gatttcggta
     1741 ccgctgatga cggtgtaacc gatgcggttt tggtcgttga tttggcggtt gatttacgtg
     1801 tactactgct acttttcgcc ccacccagtt ttagtttctg accaacttca atggtgtaag
     1861 ggggggaaat gccgttcagt cgcgccagtt cttttacgct ggttcccgtg gtgcgcgaaa
     1921 tacgatatag cgtatccccc cgtttcacgg tgtaaacgga gccggaatat gttcctgtat
     1981 cggatgattt gctacccgaa cagcccgcca aaagcagtcc aaccgataac aacatcacga
     2041 tacccagaga ttttttattc aggcgtcccg cactcaaaat ctttcctcgc ttaaaaaaca
     2101 agacgcctta tcatagcagc cagcctcttg atacccaatc tcttgcttct ggaaaaacgt
     2161 ggtaatagag aaagaggtta atttcatttg gcaaagggaa gtatcatcag caaaatattc
     2221 gctgtagagg tatcgaactt cctgactttt taccctattt
//
LOCUS       DADMJE010000286         2236 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.291, whole genome shotgun sequence.
ACCESSION   DADMJE010000286 DADMJE010000000
VERSION     DADMJE010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2236)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2236)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2236
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.291"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            324..1976
                     /locus_tag="JN001_004138"
     CDS             324..1976
                     /locus_tag="JN001_004138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858318.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-sugar
                     hydrolase/5'-nucleotidase"
                     /protein_id="HAY9055140.1"
                     /translation="MIPLKKNITLIMFTLSLLTGNPAIAYETDKVYKITVLHTNDHHG
                     HFWRNNHGEYGLSSQKTLVDNIRQKVINNGGSVLLLSGGDINTGVPESDLQKAEPDIR
                     GMNLIGYDAMAVGNHEFDNPLNILRQQEKWATFPFLSANIYQKSTGRRLFSPWKIFTR
                     QNLKIAVIGLTTDDTAKTGNSEYFTDIEFRQPAAEARSVIDELNQQEKPDIIIAATHM
                     GHYDNGESGSNAPGDVEMARSLPTGSLAMIVGGHSQAPVCMASDNKKQWNYIPGTTCV
                     PDKQNGIWIVQAHEWGKYVGQADFEFCNGTMKLVNYQLHPVNLKMRITREDGKTEFSF
                     YTPEITEDPQMLSLLTPFQNKGKAQLDVKVGVVNGRLEGDRSKVRFVQTSMGHLILSA
                     LTERIDADFAVVSGGEIRDSIESGNITYKDILKVQPFGNTVVSIDLTGKEVADYLATV
                     AQMKPDSGAYPQFLNTSFVVKKGKIEMLKIKGKSVDLNKKYRMTTFSFNATGGDGYPR
                     IDNRPGYINTGFIDAEVLIEYIREHSPLDAASYEPKGEVSWQ"
     gene            complement(1963..2163)
                     /locus_tag="JN001_004139"
     CDS             complement(1963..2163)
                     /locus_tag="JN001_004139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012421708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055141.1"
                     /translation="MTKKLAALQHQLSRKVKFSNNRQKQKHKIQQLHSHIANIRRDYF
                     HKVTATVSKKHVMIVNYVITAN"
BASE COUNT          691 a          413 c          524 g          608 t
ORIGIN      
        1 tctccaggaa acttggggcg gttcacgtca gtatcagacc atattaattg ctgaaactga
       61 taaacatcaa accttataga agggtgaatg ctgaaagggg gctatggtga tcgacgtgat
      121 gacaacgaca ggtaagaccg tgacctgata aacctgaatt gtgtcctaga cataaagtcg
      181 gtgaagggaa taaggctcag gtcagcgaat cttatagtgg cccgcagctc tgactgcaat
      241 aaggccggat acagagcagc aactactcgt cgatgtcaga acaacggaag ccttgcaaac
      301 ggggatgcgt tcatacaggt acaatgatac cgttaaaaaa aaacattacg ctaataatgt
      361 tcaccctgtc attactgaca ggaaatcctg ctatagcgta tgaaacagat aaagtatata
      421 aaataaccgt tctgcataca aatgaccacc atggacactt ttggcgtaac aatcatggtg
      481 agtacgggtt atcctcccaa aaaactctgg tggacaatat ccggcagaaa gtaataaata
      541 atggcggaag tgttctatta ttatctggtg gtgatattaa caccggtgta cctgaatcag
      601 accttcagaa ggctgaaccc gatattcgtg gaatgaatct aattggttat gatgcaatgg
      661 ccgtcggtaa tcatgaattt gataatcctc taaatatatt acgtcagcag gaaaaatggg
      721 ccacatttcc tttcctttct gctaacatat atcaaaaaag tacagggagg cgtttattca
      781 gtccatggaa aattttcacc cgtcagaatt tgaaaattgc agtcattggc ttgacgacag
      841 atgatactgc gaaaacagga aattctgaat attttactga tattgagttc cgtcaacctg
      901 ctgctgaggc gaggagtgtc attgatgaac ttaatcagca ggaaaagcca gatattatta
      961 ttgcggcaac acatatgggg cactatgaca atggcgagtc aggttcgaat gctcctggtg
     1021 atgttgaaat ggctcgcagt ttgccgactg gctcattagc aatgattgtg ggaggacatt
     1081 cacaagctcc tgtctgcatg gccagcgata ataaaaaaca gtggaattat attccgggga
     1141 caacctgtgt accagataaa caaaatggca tctggattgt acaagcgcat gagtggggaa
     1201 aatatgtcgg tcaggctgat tttgaattct gtaacggtac aatgaaactg gttaattatc
     1261 agttacaccc agttaatctc aaaatgagaa ttaccagaga agatggaaaa acggaatttt
     1321 ctttttacac ccccgaaatt actgaagatc cacagatgtt atccttactg acaccattcc
     1381 agaataaagg caaagcacaa ctggatgtga aggttggggt tgtgaacgga cgtctggaag
     1441 gggacagaag taaagttcgt tttgttcaga ccagtatggg ccatctgatt ctgagcgctc
     1501 tgacagaacg tattgacgca gattttgctg ttgtgagtgg tggggaaatt cgagattcca
     1561 tagagagtgg taacatcaca tacaaagata tactgaaagt tcagccattt ggtaatacgg
     1621 tagtaagtat tgatttgacg gggaaagaag tagctgacta cctagctaca gtggcacaga
     1681 tgaaaccgga ttccggagcc tacccacaat ttttgaatac cagctttgta gtcaaaaaag
     1741 gaaaaatcga aatgctaaaa ataaaaggta aatcggttga ccttaacaaa aaatatcgta
     1801 tgacaacatt tagctttaat gctactggtg gggatggcta tccacgtatt gataatagac
     1861 ccggatacat aaataccgga tttattgatg ctgaagtact tatcgaatat atccgggaac
     1921 attcaccgct ggatgctgct tcatatgaac caaaaggtga agtcagttgg cagtgataac
     1981 gtaattgacg atcatcacgt gttttttgct gacagtcgct gtgactttgt gaaagtagtc
     2041 tctgcggatg tttgcgatat gggaatgcag ttgctgtatt ttgtgtttct gcttctgcct
     2101 gttgttgctg aatttaacct tgcggcttaa ctgatgttgg agcgctgcca gcttcttcgt
     2161 caatttcgct gattaaagtt tattcattat ggcatgatct gcgtaagcgg ctcgtcagaa
     2221 ccgtattgat atttac
//
LOCUS       DADMJE010000287         2207 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.292, whole genome shotgun sequence.
ACCESSION   DADMJE010000287 DADMJE010000000
VERSION     DADMJE010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.292"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="JN001_004140"
     CDS             complement(117..1571)
                     /gene="ospC2"
                     /locus_tag="JN001_004140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 3 secretion system effector OspC2"
                     /protein_id="HAY9055142.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKINPNKDTKALQKNISCVTNSSS
                     SGISEKHLDHCADTVKSFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYLSEIIQKTHPLSSDERHLLSIIINSDFNFRHQSNANLSNNTLNIKSFD
                     KIKSENIQTYKNTFSEDIEEIANHDFVFFGVEISNHQETLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQRFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIRLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNAKSDMALYLLSK
                     FNFTKQDIAEMEKMNNNMYCELYDVEYLLSEDSANYKVLEYFINNGLVDVNKRFQKAN
                     SGDTMLDNAMKSKDSKTIDFLLRNGAVSGKRFGR"
     gene            1996..>2207
                     /locus_tag="JN001_004141"
     CDS             1996..>2207
                     /locus_tag="JN001_004141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055143.1"
                     /translation="MARYDLPDEAWTIIKPLLPPEPTTPRAGRPWAEHRKIINGMFWV
                     LCSGAPWRDLPERYGAWKTVYNRFNR"
BASE COUNT          685 a          405 c          365 g          752 t
ORIGIN      
        1 cgttcaccac atgcaatgtg ttgttgcagg ggaacggtct gcaccatccc ctatatcgat
       61 caatataaca aaaatgacaa cgtcagattc agggcacaac ctaaatatat tttaggtcac
      121 ctcccaaatc gtttacctga taccgctcca tttcttaata aaaaatcaat tgtttttgaa
      181 tctttgcttt tcattgcatt gtcaagcata gtgtccccac tatttgcttt ttgaaatctt
      241 ttgtttacat caaccaatcc attattaata aaatattcta gcactttata gttggcacta
      301 tcttcactaa gtaaatactc aacatcatac agctcacaat acatattgtt gttcattttc
      361 tccatctctg cgatatcttg ttttgtaaaa ttaaatttag atagtaaata aagtgccata
      421 tcagattttg cattgcctag agaataagca agagcttgat gagccatttt tttatcagtc
      481 accttattgt taatttcttc ataattggat gctttaatgg catcctccaa agatatatct
      541 ctgagtctta tctttttgaa gttatctgtg cttagcattc ttggtatatg atactcaagc
      601 tgaaacacaa agtttataat tctatccaga ctaacaggat caatgttttt attataacaa
      661 aactctcgga atctttgatc tttactcttt cttataaaat caataagatg caacccaatt
      721 ccaagcctca tatctttagt attaaatatt ggcacatcag tttttccctg attaccatgc
      781 acatacctgc taacttcatc cacaacctct ttaaagttat ctaagaaaaa tgattggtgc
      841 tcatggtaaa aaacaggtgg aatagcatta tcaaagtggt cggttaatgt catatatcca
      901 tatggagagt catgatcaat gatatacgca ttagcaccaa aatccacagt atgatgtgtt
      961 ttatttagtg ggagtgtttc ttgatgattg gaaatttcaa ccccaaaaaa aacaaaatcg
     1021 tggttagcta tttcttcaat atcctcagag aatgtgtttt tatatgtttg tatattctca
     1081 gacttaattt tatcaaagga cttaatatta agagtattat ttgacaggtt agcgttactt
     1141 tgatgtctga agttaaaatc agaattaata ataatagaga gcaagtgacg ttcatccgaa
     1201 gaaagaggat gagttttttg tattatttca gaaagatagt gtctggacac cttatcgagg
     1261 tgctcaagtg accgaaatga tgaccgtgct ccagatggcg cttcaataga aagatttaat
     1321 gatttgaaac tggtcccttg agagaacatt ttactataac tttgcgctgc tatagacttc
     1381 cttaaaaagc ttttcacagt atcagcacag tgatctaaat gtttttcact tatgccagaa
     1441 gaggatgagt ttgttacgca tgatatgttt ttttgtaatg cttttgtatc tttgttcgga
     1501 tttatttttc catcaacaag atcaatattg ttctgaacat taatatgatt tactgcttca
     1561 ggtattttca taaaacatcc cccattatgt gcgtttttat ctgcagttat ttagaataat
     1621 attatctaac ttaatatttt cttgtatgta ttataacgaa catattttaa tatgttgtac
     1681 gattttcact ctgaaatccc ctgagtttaa tcacacttcc tttactgaaa ggaattattg
     1741 caacagtatt atttgttttt ggatatatat cttgcgcctt gttatgtagt taatgctcag
     1801 aatatgatag ataaaataga gacgcagaac agggcatgct cataacatga tgataacata
     1861 aaaaattagt aacaataaat gaaagaatca tgggcgctca acaaaaagag agctaaatag
     1921 ctgcgcggaa tagtaggctg tgtcccttaa tcatctgagt tatagtaact gtctgtttac
     1981 acaacatatt gaactatggc tcgctacgac cttcccgatg aggcatggac catcatcaag
     2041 cccctgttac ctcctgaacc caccacacca cgggccggac gcccatgggc tgagcaccgt
     2101 aaaatcatca atggcatgtt ctgggtgtta tgttccggtg caccatggcg cgatttaccc
     2161 gaacgatatg gggcatggaa aactgtttat aaccgcttta accgatg
//
LOCUS       DADMJE010000288         2174 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.293, whole genome shotgun sequence.
ACCESSION   DADMJE010000288 DADMJE010000000
VERSION     DADMJE010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2174)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2174)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2174
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.293"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            334..557
                     /locus_tag="JN001_004142"
                     /pseudo
     CDS             334..557
                     /locus_tag="JN001_004142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012477181.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            666..934
                     /locus_tag="JN001_004143"
                     /pseudo
     CDS             666..934
                     /locus_tag="JN001_004143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_001449236.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1326..>2174
                     /locus_tag="JN001_004144"
     CDS             1326..>2174
                     /locus_tag="JN001_004144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858398.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY9055144.1"
                     /translation="MIKSTNIQAIGSGIMHQINNIYSLTPFPLPMELTPSCNEFYLKA
                     WSEWEKNGTPGEQRNIAFNRLKICLQNQEAELNLSELDLKTLPDLPPQITTLEIRKNL
                     LTHLPDLPPMLKVIHAQFNQLESLPALPETLEELNAGDNKIKELPFLPENLTHLRVHN
                     NRLHILPLLPPELKLLVVSGNRLDSIPPFPDKLEGLAMANNFIEQLPELPFSMNRAVL
                     MNNNLTTLPESVLRLAQNAFVNVAGNPLSGHTMRTLQQITTGPDYSGPRIFFSMGNSA
                     TISAPEH"
BASE COUNT          727 a          464 c          364 g          619 t
ORIGIN      
        1 gcttcttacc atatttgaaa taaagctcaa tagcgcaaat tttttgttct tcagtaaaca
       61 tgtttcatct tctgagagtc caggaaatcg tccgcatccc cattaccgtc ttatatcact
      121 ggcgctgaca tgtgctcatt gatgaagtga atctgaatga catgttttgc catatcaacg
      181 ccaaccggtg tatatttcat ttgtggagtc tccagtctga ggacgcttta tgcatcccgt
      241 attgggcagt atgatgccgg aaagctgcga ggctccacac ctgccagttt caccctttta
      301 accatcatac tactccgtgt ttaattgtgt gggatgcgtt cattacattt taacagtgtc
      361 accccgtcgg ccacgaaaga taaacaggtg accagaaaag ggatcttcat ccagcacatg
      421 ctatatcttg aacgtaacaa cctgaccctc cgcacccgca tcaagcggct ggcacgtaaa
      481 acaatctgct tctcgcgttc cgtggaaatc cacgaaaagt catcggctcc ttcattgaaa
      541 aacacatatt ctactgattg gaagcgccac ccgaaaaagt atcgtttttt tacagtaaac
      601 ttcatttagc cgactataat gtaaaaaaat aaatttttta ccgaaatata acataaggaa
      661 gtaatatgct tacacaaact atattccctt gtcttcccaa aaaacaagaa aatatcatcc
      721 ctgaagtatc aaatactata ttagtatctt ctactgttac tacagatgga tgtactgttt
      781 ttaataaaca aaaacagcca tatacgaatt gcaaatacct gctaccaacc gaacgaaaaa
      841 gttgaaattc acagctacag aaatacaatg gttgacaaag ataaatgaag ccggaattaa
      901 tgaaaaacaa agccaacggt attctgattt ctgaagttaa tttcagactc gtttaagctc
      961 cattttcaaa aaaaatatat cagggtttgt tactaataac ttctgaaaac agaaaaaaaa
     1021 tagagcagta attctatttc agagaggagt aactccatct atcctcgata cgtactgaac
     1081 gttatcgtga tatattcatc atgctttctt caccattatt cgagtacagg gagagacgca
     1141 atgaccttaa ataccttttt atggctgaat taccattctc aggaataaca gcagactcct
     1201 tcccatagac ggcttagggg gaaagcaata cccggagaaa gggtacaaag caaactgttt
     1261 taaaattaat aagctatatt ctatttcact agaattctta tcgctgataa gaaattttag
     1321 ttataatgat taaatcaacc aatatacagg caatcggttc tggtattatg catcaaataa
     1381 acaatatata ctcgttaact ccatttcctt tacctatgga actgactcca tcttgtaatg
     1441 aattttattt aaaagcctgg agtgaatggg aaaagaacgg taccccaggc gagcaacgca
     1501 atatcgcctt caataggctg aaaatatgtt tacaaaatca agaggcagaa ttaaatttat
     1561 ctgagttaga tttaaaaaca ttaccagatt taccgcctca gataacaaca ctggaaataa
     1621 gaaaaaacct attaacacat ctccctgatt taccaccaat gcttaaggta atacatgctc
     1681 aatttaatca actggaaagc ttacctgcct tacccgagac gttagaagag cttaatgcgg
     1741 gtgataacaa gataaaagaa ttaccatttc ttcctgaaaa tctaactcat ttacgggttc
     1801 ataataaccg attgcatatt ctgccactat tgccaccgga actaaaatta ctggtagttt
     1861 ctggaaacag attagacagc attcccccct ttccagataa gcttgaaggg ctggctatgg
     1921 ctaataattt tatagaacaa ctaccggaat taccttttag tatgaacagg gctgtgctaa
     1981 tgaataataa tctgacaaca cttccggaaa gtgtcctgag attagctcag aatgccttcg
     2041 taaatgttgc aggtaatcca ctgtctggcc ataccatgcg tacactacaa caaataacca
     2101 ccggaccaga ttattctggt cctcgaatat ttttctctat gggaaattct gccacaattt
     2161 ccgctccaga acac
//
LOCUS       DADMJE010000289         2050 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.294, whole genome shotgun sequence.
ACCESSION   DADMJE010000289 DADMJE010000000
VERSION     DADMJE010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 2050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2050
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.294"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(273..1727)
                     /locus_tag="JN001_004145"
     CDS             complement(273..1727)
                     /locus_tag="JN001_004145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector OspC family protein"
                     /protein_id="HAY9055145.1"
                     /translation="MKIPEAVNHINVQNNIDLVDGKTNPNKATKALQKNILRVTNSSS
                     SGISEKHLDHCANTVKNFLRKSIAAQSYSKMFSQGTSFKSLNLSIEAPSGARSSFRSL
                     EHLDKVSRHYISEIIQKVHPLSSDERHLLSIIINSNFNFRHQSNSNLSNNILNIKSFD
                     KIQSENIQTHKNTYSEDIKEISNHDFVFFGVEISNHQEKLPLNKTHHTVDFGANAYII
                     DHDSPYGYMTLTDHFDNAIPPVFYHEHQSFFLDNFKEVVDEVSRYVHGNQGKTDVPIF
                     NTKDMRLGIGLHLIDFIRKSKDQGFREFCYNKNIDPVSLDRIINFVFQLEYHIPRMLS
                     TDNFKKIKLRDISLEDAIKASNYEEINNKVTDKKMAHQALAYSLGNKKADIALYLLSK
                     FNFTKQDVAEMEKMNNNRYCNLYDVEYLLSKDGANYKVLEYFINNGLVDVNKKFQKAN
                     SGDTMLDNAMKSKNPKMIDFLLKNGAILGKRFEI"
BASE COUNT          615 a          363 c          343 g          729 t
ORIGIN      
        1 tcccgtaaag acaggagtca agttcccgct ccgacataac tgcgtgcaat ggattttgaa
       61 ggaaccgtca gcccattccc cggaggcaaa catgggctgg caaaagtgta gcggtattag
      121 gcacagctat ttaggaaaga gggaccatct ccatctcatt aaatggacca cgccagacaa
      181 ttcactgtca tgctgatgct gcactgtggg gacagaatca ctcatgatga cttcgataat
      241 cgacgacatt attatttggc cgagctttta ggtcatatct caaatcgttt gcctaatatt
      301 gctccatttt ttaataaaaa atcaatcatt tttggatttt tgcttttcat tgcattgtca
      361 agcatagtgt ccccactatt tgctttttga aattttttgt ttacatcaac caatccatta
      421 ttgataaaat attctagcac tttatagttg gcaccatctt tactaagtaa gtattcaaca
      481 tcatacagat tacaatatct attgttgttc attttctcca tctctgcgac atcttgtttt
      541 gtaaaattaa atttagatag taaataaagt gctatatcag cttttttatt gcctaaagaa
      601 taagcaaggg cctgatgagc cattttttta tcagtcactt tattgttaat ctcttcataa
      661 ttagatgctt taatcgcatc ctccaaagat atgtctctga gttttatttt tttgaagtta
      721 tctgtactta gcattcttgg tatatgatac tcaagctgaa acacaaagtt tataattcta
      781 tccagactaa caggatcaat atttttgtta taacaaaact ctctgaatcc ttgatcttta
      841 ctctttctta taaaatcaat aagatgcaac ccaattccaa gcctcatatc tttagtgtta
      901 aatattggaa catcagtttt cccctgatta ccatgcacat acctgctaac ttcatccaca
      961 acctctttaa agttatctaa gaaaaatgat tggtgctcat ggtaaaaaac aggtggaata
     1021 gcattatcaa agtgatcggt taatgtcata tatccatatg gagagtcatg atcaatgata
     1081 tacgcattgg cgccaaaatc tacagtatga tgtgttttat ttagcgggag tttttcttga
     1141 tgattggaaa tttcaacccc aaaaaaaaca aaatcgtggt tagagatttc tttaatatcc
     1201 tcagagtatg tattcttatg tgtttgtata ttttcagact gaattttatc aaaggattta
     1261 atattaagaa tattatttga cagattagag ttactttgat gtctgaagtt aaaattagaa
     1321 ttaataataa tagaaagtaa gtgacgttcg tctgaagaaa gaggatgaac tttttgtatt
     1381 atctcagaga tatagtgcct ggacacctta tcgagatgct caagtgaccg aaatgatgac
     1441 cgtgctccag atggcgcttc aatagaaaga tttagtgatt tgaaactggt cccttgagaa
     1501 aacattttgc tataactttg cgctgctata gacttcctta aaaagttttt cacagtatta
     1561 gcacagtgat ctaaatgttt ttcacttatg ccagaagaag atgagtttgt tacgcgtaat
     1621 atattttttt gtaatgcttt tgttgcttta ttcggattcg tttttccatc aacaagatca
     1681 atattattct gaacattaat atgatttact gcttcaggta ttttcatccc ccccccaatt
     1741 atgtgcgttt ttatctgtgg ttatttagat aacattatct aactggacac tttcttgtat
     1801 gtattatagc taaatgaaca gattttaata tgttgtatgg ttttcactct gaaatcccct
     1861 gaatttaatc acgtttcctt tactgaaggc aattttaacc gtagtatcaa ttattaaccc
     1921 ttgggcttga tatccctctc ctcttctggg cacgggggat gtcagattac ttattacaga
     1981 aaccaaaaga attgtaagcg tcatctcagt gtcgtctatt tcaatgtctg atgattggcg
     2041 atgatagagt
//
LOCUS       DADMJE010000290         1962 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.295, whole genome shotgun sequence.
ACCESSION   DADMJE010000290 DADMJE010000000
VERSION     DADMJE010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1962
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.295"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..819
                     /gene="bluF"
                     /locus_tag="JN001_004146"
     CDS             <1..819
                     /gene="bluF"
                     /locus_tag="JN001_004146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HAY9055146.1"
                     /translation="FVLATEQSTYFEIPAEDSWLFIADGSDKELDSCALSPTINDHFA
                     FHPIVDPLSRRIIAFEAIVQKNEDSPSAIAVGQRKDGEIYTADLKSKALAFTMAHALE
                     LGDKMISINLLPMTLVNEPDAVSFLLNEIKANALVPEQIIVEFTESEVISRFDEFAEA
                     IKSLKAAGISVAIDHFGAGFAGLLLLSRFQPDRIKISQELITNVHKSGPRQAIIQAII
                     KCCTSLEIQVSAMGVATPEEWMWLESAGIEMFQGDLFAKAKLNGIPSIAWPEKK"
     gene            1024..1755
                     /locus_tag="JN001_004147"
     CDS             1024..1755
                     /locus_tag="JN001_004147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HAY9055147.1"
                     /translation="MAYYSIGDVAERCGINPVTLRAWQRRYGLLKPQRSEGGHRLFDE
                     EDIQRIEEIKRWISNGVPVGKVKALLETTSQDTEDDWSRLQEEMMSILRMANPAKLRA
                     RIISLGREYPVDQLINHVYLPVRQRLVLDHNTSRIMSSMFDGALIEYAATSLFEMRRK
                     PGKEAILMAWNVEERARLWLEAWRLSLSGWHISVLADPIESPRPELFPTQTLIVWTGM
                     APTRRQNELLQHWGEQGYKVIFHAP"
BASE COUNT          563 a          437 c          435 g          527 t
ORIGIN      
        1 tttgtccttg caaccgaaca atcaacctat ttcgagatcc ctgccgaaga ctcctggctt
       61 tttatcgctg acggatctga taaagaactt gattcctgtg ccctttcacc aactataaac
      121 gaccactttg cctttcatcc tattgtcgat cccttatcgc ggcggataat cgcttttgaa
      181 gccattgtgc aaaaaaatga agatagccca tcagccatag cggttgggca gcgtaaagac
      241 ggggaaatct acacagcgga tctcaaaagt aaggcgcttg cattcacgat ggcacacgca
      301 cttgagctcg gtgataaaat gatttcaatc aatctattac ctatgaccct ggttaacgaa
      361 cctgacgcag tctctttttt acttaatgaa ataaaggcca atgctctggt gcctgaacaa
      421 atcatcgttg aatttactga aagtgaagtc atatctcggt ttgatgagtt tgccgaagcg
      481 attaaatcgc taaaggctgc tggtatcagt gtagcaattg atcattttgg cgcaggtttt
      541 gctggtttgt tactcctgtc acgcttccag cctgacagaa ttaaaatcag tcaggaattg
      601 attaccaatg ttcataaaag tgggccacgg caggcaatta ttcaggcgat cataaaatgc
      661 tgtacatcac ttgaaattca agtcagtgct atgggcgtgg caacaccaga agagtggatg
      721 tggcttgaat ccgcaggaat tgagatgttt cagggagatc tgtttgctaa agctaaattg
      781 aatggtatcc cttccatagc gtggccagag aaaaaataat tttcagcaca ttctttcaca
      841 tgatttcagt aaatcatcgt gaaaatgaat acgttacgtt taaatttaat ccacattaaa
      901 aataatgttt catccaattt agctgaaatc ttatttatac tttgtacaat tttagcgtat
      961 attgtacaaa gtattattgg gtcgtgtaca ggcgacggag atttgtgacc gcaaggagga
     1021 attgtggctt attacagcat tggtgatgtt gctgaacgtt gcgggattaa tcctgtcact
     1081 ctccgggcct ggcaacgccg ctacggtttg ttaaaaccac agcgcagtga aggcggacac
     1141 cgactctttg atgaagaaga catacaacgc atcgaagaga tcaagcgttg gataagtaat
     1201 ggcgtccctg taggcaaagt taaagcatta ctggaaacca ccagccagga tacggaagat
     1261 gactggagcc gcctgcaaga agagatgatg tcaattcttc gcatggctaa tcctgccaaa
     1321 ctacgcgcga gaattatttc actgggtcga gagtacccag tagatcaatt gattaatcat
     1381 gtttaccttc ctgttcgcca gcgtctcgtg cttgatcaca acacctcccg cattatgagc
     1441 agtatgtttg acggcgcatt aattgaatac gcagcaacct cgcttttcga aatgcgccgt
     1501 aagcccggta aagaagccat tctgatggcg tggaatgttg aagagagagc acgattgtgg
     1561 ctggaagcat ggcgtttatc attgtcagga tggcacattt ctgttcttgc tgatcccatt
     1621 gaatcgccgc gcccggaact gttcccgacg caaacattga ttgtctggac aggcatggca
     1681 ccaacgagaa ggcaaaacga acttttacaa cactggggtg agcaaggtta taaagtcatc
     1741 tttcatgccc cctaatttca cctttatccc gccccttaga cagaatgtta taatctgaac
     1801 ccacaacagc atttgtaccg gagctgatcc gttgcaaaat gctcaccggg agaattcagg
     1861 taatccctct atcacactct gtacatatca cagccaaagg acagaccaga ttgaagtggt
     1921 aaaaccgatc gtgcacacta cgcagtctca caactaacaa ga
//
LOCUS       DADMJE010000291         1957 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.296, whole genome shotgun sequence.
ACCESSION   DADMJE010000291 DADMJE010000000
VERSION     DADMJE010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1957)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1957)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1957
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.296"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(26..>1957)
                     /gene="pdeF"
                     /locus_tag="JN001_004148"
     CDS             complement(26..>1957)
                     /gene="pdeF"
                     /locus_tag="JN001_004148"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeF"
                     /protein_id="HAY9055148.1"
                     /translation="FIIIIIIIIILCWGGYRVFTPRRNNVSHGDTRLISQRIFWQIVF
                     PATLFLILFQFAAFVGLLASRENLVGVMPFNLGTLINYQALLVGNLIGVPLCYFIIRV
                     VRNPFYLRSYYSQLKQQVDAKVTKKEFALWLLALGALLLLLCMPLNEKSTIFSTNYTL
                     SLLLPLMMWGAMRYGYKLISLLWAVVLMISIHSYQNYIPIYPGYTTQLTITSSSYLVF
                     SFIVNYMAVLATRQRAVVRRIQRLAYVDPVVHLPNVRALNRALRDAPWSALCYLRIPG
                     MEMLVKNYGIMLRIQYKQKLSHWLSPLLEPGEDVYQLSGNDLALRLNTESHQERITAL
                     DSHLKQFRFFWDGMPMQPQIGVSYCYVRSPVNHIYLLLGELNTVAELSIVTNAPENMQ
                     RRGAMYLQRELKDKVAMMNRLQQALEHNHFFLMAQPITGMRGDVYHEILLRMKGENDE
                     LISPDSFLPVAHEFGLSSSIDMWVIEHTLQFMAENRAKMPAHRFAINLSPTSVCQARF
                     PFEVSQLLAKYQIEAWQLIFEVTESNALTNVKQAQITLQHLQELGCQIAIDDFGTGYA
                     SYARLKNVNADLLKIDGSFIRNIVSNSLDYQIVASICHLARMKKMRVVAEYVENEEIR
                     EAVLSLGIDYMQGYLIGKP"
BASE COUNT          575 a          471 c          440 g          471 t
ORIGIN      
        1 tttcattcaa cgtatcaatt aacggctacg gcttaccaat aagataaccc tgcatataat
       61 cgatccccaa agagagcacc gcctcgcgga tctcttcgtt ttcaacgtac tctgccacta
      121 cccgcatttt cttcattcgc gccaggtggc aaatcgatgc cactatctga taatccagac
      181 tatttgacac aatattgcgg ataaaactgc cgtcaatttt aagcagatcg gcattcacat
      241 ttttaagccg tgcatagctg gcgtagccgg tgccgaaatc atcaatcgca atctggcagc
      301 ctaattcctg aagatgctgc aaggtgattt gcgcctgctt aacattggtc agagcattac
      361 tttcggtgac ttcaaaaata agttgccacg cttcaatctg atatttagcc agcaactgac
      421 tgacttcaaa aggaaaacga gcctgacata ccgaggttgg agacagatta atagcaaaac
      481 ggtgagcggg catcttcgct ctgttttcag ccataaattg cagcgtatgc tcaatgaccc
      541 acatgtcgat actcgacgat aaaccaaatt cgtgcgcgac cggcaagaag ctatcggggc
      601 tgatcagttc atcattctca cctttcatgc gcagaagaat ttcatggtaa acatcaccac
      661 gcataccggt aatcggctgg gccatcagga aaaaatggtt gtgttccagc gcctgctgta
      721 gtcgattcat catcgcgact ttatctttca attcgcgttg caaatacatt gccccgcgac
      781 gctgcatatt ttccggggcg ttggtcacga tggaaagttc ggcgaccgta tttagctctc
      841 ccagcagcag gtagatatga ttcactggcg agcgcacata gcagtaactg acgccaatct
      901 gcggttgcat cggcatgcca tcccaaaaga aacgaaattg cttgagatgg ctatccagtg
      961 cggtaatgcg ctcctggtgc gattctgtat tcagtcgcag cgcgagatcg ttacccgaaa
     1021 gctgataaac atcttcaccc ggttccagca agggtgacag ccagtgagaa agtttttgct
     1081 tgtattgaat ccgcagcatg atgccatagt tcttaaccag catttccatg ccagggatgc
     1141 gtaaataaca aagcgcagac cagggggcat cacgcaacgc gcgattcagg gcgcgaacat
     1201 ttggcagatg aaccaccggg tccacatacg caagccgctg aatgcgtctg actaccgctc
     1261 tctgacgggt tgccagtaca gccatataat tgacaataaa agagaatacc agataactgg
     1321 aggaggttat ggtcagctgc gtggtatagc caggataaat gggaatgtaa ttttgatagc
     1381 tgtggatgct gatcatcaac acgaccgccc agagcagaga aatcagctta taaccatagc
     1441 gcatcgctcc ccacatcatc aggggcagca ataatgacaa ggtataattg gtgctaaaaa
     1501 ttgtgctttt ttcatttaac ggcatgcata acagcaacaa taaagcacct aatgccagta
     1561 gccagagcgc gaactctttt ttggtgactt tggcatcaac ctgctgtttt aattgcgaat
     1621 aatagctacg taaataaaat ggatttcgca ctacccgaat gatgaagtag cacagcggga
     1681 caccgatcag attacccacc agtaaggcct gataattgat taaagtcccg aggttaaaag
     1741 gcatgacacc gaccagattt tctctgctcg ccaataatcc tacaaatgca gcaaactgga
     1801 aaagtatcag aaacagcgtt gcaggaaaca caatctgcca gaatatacgc tgggaaatta
     1861 aacgggtatc accatgtgaa acgttgttac gccggggagt aaagaccctg taaccgcccc
     1921 aacagagaat gataatgata atgataatga taataaa
//
LOCUS       DADMJE010000292         1882 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.297, whole genome shotgun sequence.
ACCESSION   DADMJE010000292 DADMJE010000000
VERSION     DADMJE010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1882
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.297"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            368..1156
                     /gene="virF"
                     /locus_tag="JN001_004149"
     CDS             368..1156
                     /gene="virF"
                     /locus_tag="JN001_004149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858179.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family invasion system transcriptional
                     regulator VirF"
                     /protein_id="HAY9055149.1"
                     /translation="MMDMGHKNKIDIKVRLHNYIILYAKRCSMTVSSGNETLTIDEGQ
                     IAFIERNIQINVSIKKSDSINPFEIISLDRNLLLSIIRIMEPIYSFQHSYSEEKRGLN
                     KKIFLLSEEEVSIDLFKSIKEMPFGKRKIYSLACLLSAVSDEEALYTSISIASSLSFS
                     DQIRKIVEKNIEKRWRLSDISNNLNLSEIAVRKRLESEKLTFQQILLDIRMHHAAKLL
                     LNSQSYINDVSRLIGISSPSYFIRKFNEYYGITPKKFYLYHKKF"
     gene            complement(1098..1508)
                     /locus_tag="JN001_004150"
     CDS             complement(1098..1508)
                     /locus_tag="JN001_004150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001409096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HAY9055150.1"
                     /translation="MPFHRPTKWVQYISAAPALSQQAVDQEWSYMDFLEHLLHEEKLA
                     RHQRKQAMYTRMAAFPAVKTFEEYDFTFATRAPQKQLQSLRSLSFIERNENIVLLGPS
                     GVGKTHLAIAMGYEAFKIFYDISKISLELYHNIH"
     gene            1519..1882
                     /locus_tag="JN001_004151"
                     /pseudo
     CDS             1519..1882
                     /locus_tag="JN001_004151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611947.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          591 a          336 c          374 g          581 t
ORIGIN      
        1 aatatcaaca ccaaccggat ttgtggagcc tccagtctga aggggcttta tgcgttccgt
       61 ataggatatt atgatgctgg agttttgcga agctccactc ctttccgaac atttacacag
      121 atattgccta agaaaagtga aaccataata tggttatagt ccctttcagt gcaaatactt
      181 agcttgttgc acagagaaat agaagctgca taagctcttt cttcaaaaaa tgtaaataaa
      241 gttaaatata ggaaaaatta cttaatctat cttaataacg gaaagatttt gtatacaatc
      301 actgttacag aaatttctta gttactctgt aaacactaaa tatagtttgg tatattctgt
      361 tgaatttatg atggatatgg gacataaaaa caaaatagat ataaaggttc gcttgcataa
      421 ctatattatt ttatatgcaa aaaggtgttc aatgacggtt agctcaggca atgaaacttt
      481 gactatcgat gaagggcaaa ttgcttttat agagcgaaat atacaaataa acgtctccat
      541 aaaaaaatct gatagcatta atccatttga gattataagc cttgacagaa atttattatt
      601 aagcattatt agaataatgg aaccaattta ttcatttcaa cactcctatt ctgaggagaa
      661 aagggggtta aacaaaaaaa tattcctcct ctctgaggag gaggtttcta tcgatttgtt
      721 caaatctata aaagagatgc cttttggcaa aagaaagatc tatagtttag cttgcctttt
      781 atcagctgtt tctgatgagg aagctttata tacttcgata tcgatagctt cttctcttag
      841 tttttctgat cagataagga agattgttga aaaaaacatc gagaagagat ggcgtctttc
      901 tgatatttca aataacttga atttatcaga aatagctgtt agaaaacgat tggagagtga
      961 aaaattaaca tttcaacaaa tccttcttga tattcgcatg catcatgcag caaagctttt
     1021 attgaatagt caaagctata ttaatgatgt atcaagactt atcggaatat caagcccatc
     1081 ttattttata aggaaattta atgaatatta tggtataact ccaaagaaat tttacttata
     1141 tcataaaaaa ttttaaatgc ttcatagccc atcgctattg ccagatgggt tttccccaca
     1201 cctgatggcc ctagtaatac gatattttca ttacgttcta tgaagctgag tgagcgtaac
     1261 gactggagtt gcttctgcgg tgctctggtg gcgaatgtga agtcatactc ttcgaacgtt
     1321 ttcaccgccg ggaaggctgc cattcgggta tacatcgcct gtttacgttg atgacgtgcc
     1381 agtttttctt catgaagcag atgctccagg aagtccatat aactccattc ctggtctact
     1441 gcctgttgtg acagcgcagg cgctgcgctt atgtactgca cccattttgt tggacgatga
     1501 aatggaatag cccctaatat gtcaaagcca aaataccctt ttgaaaagcg ccttgaagtc
     1561 gtgaatcact acttcactac tgatgatggt tacaggatca tctcggcacg ttttggtgtc
     1621 cccgaaccca ggtcaggaca tgggttgccc tctatgaaaa acatggagaa aaaggcttaa
     1681 ttcccaaacc taaaggtgtt agtgctgatc cagagttgcg tattaaggtc gtgaaagctg
     1741 tgattgagca gcacatgtcc cttaatcagg ctgctgctca ctttatgctt gctggtagtg
     1801 gttctgtagc caggtggctg aaggtttatg aagagcgcgg agaagctggt ttacgcgcgc
     1861 tcaagattgg caccaaaaga aa
//
LOCUS       DADMJE010000293         1815 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.298, whole genome shotgun sequence.
ACCESSION   DADMJE010000293 DADMJE010000000
VERSION     DADMJE010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1815)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1815)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1815
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.298"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(316..1464)
                     /locus_tag="JN001_004152"
     CDS             complement(316..1464)
                     /locus_tag="JN001_004152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9055151.1"
                     /translation="MSTYTRPVMLLLSGLLLLTLAIAVLNTLVPLWLAQEHMSTWQVG
                     VVSSSYFTGNLVGTLLTGYVIKRIGFNRSYYLASFIFAAGCAGLGLMIGFWSWLAWRF
                     VAGVGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYVGTFLGQLLVSKVSTELMSV
                     LPWVTGLTLAGILPLLFTRVLNQQAENHDSTSITSMLKLRQARLGVNGCIISGIVLGS
                     LYGLMPLYLNHKGVSNASIGFWMAVLVSAGILGQWSIGRLADKFGRLLVLRVQVFVVI
                     LGSIAMLSQAAMAPALFILGAAGFTLYPVAMAWACEKVEHHQLVAMNQALLLSYTVGS
                     LLGPSFTAMLMQNFSDNLLFIMIASVSFIYLLMLLRNAGHTPKPVAHV"
BASE COUNT          574 a          464 c          394 g          383 t
ORIGIN      
        1 ggttggcgta gttattaaca acgttgccaa aaccccagac agtgataaaa gacatcagcg
       61 caatgttgta ccatcgcagc tgtttttcct gaacattccc agccatagac aaatccttcg
      121 ccaaaattat aggggcatct gtaaaacgag ggattatgcg cggcaaataa gaagtgcgga
      181 aatagcgaaa tgcaaaatta taacctgctg cacattttat ttttaaacga ataaaatttg
      241 gaataaagca agtcagatag aagaaacaaa aaagcagagt gtgaaacagt aagttcacac
      301 tctgcttgaa ttcatttaca cgtgagcaac gggtttcggc gtatgaccgg cgttgcgcag
      361 cagcatcagc aaatagataa acgatacgct ggcgatcatg ataaacaata aattatcgga
      421 gaaattctgc attagcatag cggtaaatga cgggccaagc agacttccca cagtatagct
      481 caacagtaag gcctggttca tcgccaccag ttgatgatgt tcaactttct cgcaagccca
      541 tgccatcgcc accggatata gcgtaaagcc agcggcaccg aggatgaata acgctggggc
      601 catcgccgcc tggctaagca tcgcgatact gccgagaatg acgacaaaga cctgaacacg
      661 caacaccagc agtcgaccaa acttatccgc cagacgtcca atcgaccatt gtccaaggat
      721 acccgcactg accagtaccg ccatccagaa accaatgctg gcattgctca cccctttgtg
      781 attgaggtac agcggcatca ggccatatag agatcccaga acgattcctg agataatgca
      841 gccattcacg ccaagccgcg cctgacggag ttttagcatt gacgtaattg acgtcgaatc
      901 atggttttca gcctgctgat tcagcacacg cgtaaacaac agcggtaaga tccctgccaa
      961 cgtcaaacct gtaacccacg gcaatacgga catcagctcg gttgaaactt tgctgaccag
     1021 taactggcct aaaaacgttc ccacgtaata aaccatcata tacgcagcaa gcaaacgccc
     1081 acggttacgt gacgtcccac tgcacatcag cgcgctctca acaaccaccc aaatcatggc
     1141 acagccgacg cccgcgacaa aacgccaagc caaccagctc cagaatccaa tcatcaggcc
     1201 aaggccggca cagccagcgg caaaaatgaa ggaggccaga taatagctgc ggttaaagcc
     1261 aatgcgctta atgacatacc ctgtcagcaa tgtaccgaca aggttgccgg taaaatagga
     1321 tgagctgaca acgcctacct gccatgtgga catgtgttcc tgggcgagcc aaagcggcac
     1381 gagtgtattt aacaccgcaa tcgccagagt caacaaaagc aggccagaca gcaaaagcat
     1441 gacaggccgg gtatacgtgg acatgaatta aaaccgtgag gaagttcaaa tttcatgcgc
     1501 atcatgccac cgccaaaaca ttgtcaatga gtgaaaatac gcgatatccc agcggcggta
     1561 ttatcgattt atattactca ttcataacgc taatgctgaa gagatgatta gtctcatctg
     1621 attgttttta ttgaactaac acaaatttca tacgcttcgt tcagtcgaaa aatttcatgg
     1681 tcacagcaaa ctcatatttc ccgtctatgc tttcagagca atgcatcgcg tctgatcgat
     1741 ttcagacgta ccactgactc tcgaaaggag aagaggatga ccaaaccgta tgttcgtctt
     1801 gataaaaatg atact
//
LOCUS       DADMJE010000294         1764 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.299, whole genome shotgun sequence.
ACCESSION   DADMJE010000294 DADMJE010000000
VERSION     DADMJE010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1764)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1764)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1764
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.299"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..279
                     /locus_tag="JN001_004153"
     CDS             <1..279
                     /locus_tag="JN001_004153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309007.1"
                     /note="oxidoreductase, Fe-S subunit; terminal electron
                     transfer protein for the reduction of DMSO; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase subunit B"
                     /protein_id="HAY9055152.1"
                     /translation="PQYNETKGHMTKCDGCYDRVAEGKKPICVESCPLRALDFGPIDE
                     LRKKHGDLAAVAPLPRAHFTKPNIVIKPNANSRPTGDTTGYLANPKEV"
     gene            281..1144
                     /locus_tag="JN001_004154"
     CDS             281..1144
                     /locus_tag="JN001_004154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dimethyl sulfoxide reductase anchor subunit"
                     /protein_id="HAY9055153.1"
                     /translation="MGSGWHEWPLMIFTVFGQCVAGGFIVLALALLKGDLRAEAQQRV
                     IACMFGLWVLMGIGFIASMLHLGSPMRAFNSLNRVGASALSNEIASGSIFFAVGGIGW
                     LLAMLKKLSPALRTLWLIVTMVLGVIFVWMMVRVYNSIDTVPTWYSIWTPMGFFLTMF
                     MGGPLLGYLLLSLAGVDGWAMRLLPAISVLALVVSGVVSVMQGAELATIHSSVQQAAA
                     LVPDYGALMSWRIVLLAVALCLWIAPQLKGYQPAVPLLSVSFILLLAGELIGRGVFYG
                     LHMTVGMAVAS"
     gene            complement(1179..1760)
                     /locus_tag="JN001_004155"
     CDS             complement(1179..1760)
                     /locus_tag="JN001_004155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005135793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrolase"
                     /protein_id="HAY9055154.1"
                     /translation="MLVDHQAGLLSLVRDIEPDKFKNNVLALGDQAKYFNLPTILTTS
                     FETGPNGPLVPELKAQFPDAPYIAHPGNINAWDNEDFVKAVKATGKKQLIIAGVVTEV
                     CVAFPALSAIEEGFDVFVVTDASGTFNEITRHSAWDRMSQAGAQLMTWFGVACELHRD
                     WHNDIEGLATLFSNHIPDYRNLMTCYDTLTKQK"
BASE COUNT          379 a          425 c          490 g          470 t
ORIGIN      
        1 ccgcaatata acgaaacgaa aggccatatg accaaatgcg atggttgtta tgaccgtgtt
       61 gcggagggta aaaagccgat ctgtgttgaa tcttgtccgc tgcgggcgct ggatttcggc
      121 cctatcgacg agctgcgtaa aaaacatggc gatctggcgg ccgttgcgcc gttgccgcga
      181 gctcacttta ccaaaccgaa tattgtgatc aaacccaatg ccaatagccg cccgaccggg
      241 gataccactg gctatctggc aaacccgaag gaggtgtgag atgggaagtg gatggcatga
      301 atggccgctg atgatcttca cggtcttcgg gcaatgtgta gcaggtggtt ttatcgttct
      361 ggctttggcg ctgctcaaag gcgacctgcg agcagaagcc cagcagcgtg ttatcgcctg
      421 catgtttggt ttatgggtgc tgatgggcat tggctttatc gcctctatgc tccatcttgg
      481 ttcaccaatg cgcgctttta actcgctcaa ccgggtaggg gcttcagcac tcagtaacga
      541 aatcgccagc ggttcgatct tttttgccgt aggcggcatc ggctggttgc tggcaatgct
      601 gaaaaagctg tcaccggcat tgcgtacgct gtggctgata gtgacgatgg ttcttggcgt
      661 catctttgtc tggatgatgg tgcgtgtgta taacagcatt gataccgttc cgacctggta
      721 cagcatctgg acgccgatgg gcttcttcct gacgatgttt atgggcggcc cgttactggg
      781 ttacctgttg ttgagtctgg ctggcgtcga tggctgggcg atgcgtctgc tgccagcaat
      841 ttctgtactg gcactggtag tgagtggcgt ggtgtcagtg atgcagggcg cagagctggc
      901 gactattcat agttctgtgc agcaggccgc agcgctggtg ccggactatg gtgcgctgat
      961 gtcctggcgg atcgtgcttt tggccgttgc cctgtgcttg tggattgcac cacagctaaa
     1021 aggttatcag cctgcggttc cgctactttc tgtatcattc attctgcttc tggcagggga
     1081 attaatcggt cgcggcgtat tctatggttt gcatatgacc gtggggatgg ccgtcgcaag
     1141 ctaatcataa caaccggggt ttcggccccg gttctctttt atttctgctt cgttaacgtg
     1201 tcataacagg tcatcaaatt acgataatca ggaatgtggt tagagaacaa cgtcgccagt
     1261 ccttcaatat cattatgcca gtcgcgatgc agctcgcacg ccacgccgaa ccatgtcatc
     1321 aattgcgcac cagcttgcga catgcgatcc catgccgaat gccgggtaat ttcattaaag
     1381 gtccctgacg cgtcagtcac gacaaagacg tcaaaccctt cttcaatggc tgaaagcgcc
     1441 gggaatgcca cgcaaacttc ggttaccaca ccggcaataa ttaactgttt tttacctgtc
     1501 gctttgacag cttttacaaa atcttcgtta tcccaggcgt taatatttcc cgggtgagca
     1561 atgtaaggtg catcggggaa ttgtgctttc agttctggaa ctaatgggcc gttaggaccg
     1621 gtttcaaaac tggtggtaag aatagttggt aagttgaaat acttagcctg gtcacccagc
     1681 gccagcacgt tatttttaaa cttatcgggt tcgatatccc gtacaaggga aagtaaacca
     1741 gcctggtgat caacaagcaa aacg
//
LOCUS       DADMJE010000295         1736 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.300, whole genome shotgun sequence.
ACCESSION   DADMJE010000295 DADMJE010000000
VERSION     DADMJE010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1736)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1736)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1736
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.300"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            67..807
                     /locus_tag="JN001_004156"
     CDS             67..807
                     /locus_tag="JN001_004156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial chaperone"
                     /protein_id="HAY9055155.1"
                     /translation="MFFNTKHTTALCFVTCMAFSSSSIADIVISGTRVIYKSDQKSVN
                     VRLENKGNNPLLVQSWLDTGDDNAEPGSITVPFTATPPVSRIDAKRGQTIKLMYTAST
                     SLPKDRESVFWFNVLEVPPKPDAEKVANQSLLQLAFRTRIKLFYRPDGLKGNPSEAPL
                     ALKWFWSGSEGKASLRVTNPTPYYVSFSSGDLEASGKRYPIDVKMIAPFSDEVMKVTG
                     LNGKASSAKVHFYAINDFGGTIEGNASL"
     gene            842..1736
                     /locus_tag="JN001_004157"
                     /pseudo
     CDS             842..1736
                     /locus_tag="JN001_004157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414681.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria/pilus outer membrane usher protein"
BASE COUNT          502 a          367 c          369 g          498 t
ORIGIN      
        1 aatagtgtta ataatttcta tttttatatt attccctgtt ttaattaact ctgtcaggga
       61 tggtttatgt tttttaacac caaacataca acagctttat gcttcgtaac ctgtatggct
      121 tttagttcat cgtctattgc ggacattgtc atttcgggta ctcgcgtaat atataaaagc
      181 gatcaaaaaa gtgtcaacgt acgtctggaa aataaaggga ataacccgtt gcttgtccag
      241 agttggttag atactggcga tgacaacgct gagcctggca gtattacagt cccttttact
      301 gccacgccgc cagtatcgcg tattgatgcc aaacgtgggc aaacaatcaa attaatgtac
      361 acagccagca cctcactgcc taaagacaga gagagcgtgt tctggtttaa cgtactggaa
      421 gttccaccaa aaccagatgc agaaaaggtc gcgaatcaaa gtctgctgca actggcattt
      481 cgcacacgta taaaactttt ctatcgcccg gatggattga agggaaatcc ctctgaagcc
      541 ccgttagccc tgaagtggtt ctggtcaggt tcagaaggta aggcgtcatt gcgagtgacc
      601 aatccaaccc cttactacgt ctcttttagc agtggtgatt tagaagctag cggtaaacgc
      661 tatccgattg atgtgaaaat gattgcacca tttagtgatg aggtcatgaa agtcactggc
      721 cttaatggca aagcaagttc tgcaaaagta catttttacg ccattaatga ttttggtggc
      781 accattgaag gtaatgccag tctgtaatca ggcaaggata taattccgca ggaagcataa
      841 cgtgactata aaaccaacta aaaattatca taatcatctg acccgtatcg ctacgttttg
      901 cgcgctgctg tattgcaata gtgctttctg tgctgaactt gttgaatatg accatacctt
      961 cctgatgggg cagaatgcct caaatattga tctcagccgg tatagtgaag gtaaccctgc
     1021 tataccgggt atgtacgacg tcagtgttta tgtcaacgat caacctatta ttaaccaaag
     1081 cattacattt attgaaattg aaggaaaaaa aacgcacaag cctgtatcac acttaagaat
     1141 ttattgcagt ttcatataaa ttctcccgat ataaataacg aaaaagccgt tctgcttgcc
     1201 agggatgaaa cactcggcaa ttgccttaat ttgacggaaa ttattcctca ggcttctgtt
     1261 cgttatgacg ttaacgagca acgtctggat atagacgttc ctcaggcatg ggtaatgaaa
     1321 aattaccaaa actatgttga tccatcgtta tgggaaaatg gcattaatgc ggccatgttg
     1381 tcatacaacc tcaacggata tcatagtgaa actcctggtc gaagaaatga cagcatttat
     1441 gctgctttta acggtgggat gaatttaggt gcatggcgac tgcgtgcctc aggcaactac
     1501 aactggatga ccgattctgg cagtaattat gattttaaga atcggtatat acagcgtgat
     1561 atcgcctcgc tgcgttctca actcattctt ggtgagtctt atacaacggg cgaaaccttt
     1621 gattctgtca gtatccgcgg cattcgttta tacagcgaca gccgcatgtt gcctccgaca
     1681 ttagcgagtt ttgcgcctat cattcatggc gttgctaata ccaacgccaa agtcac
//
LOCUS       DADMJE010000296         1715 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.301, whole genome shotgun sequence.
ACCESSION   DADMJE010000296 DADMJE010000000
VERSION     DADMJE010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1715)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1715)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1715
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.301"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            122..1399
                     /locus_tag="JN001_004158"
     CDS             122..1399
                     /locus_tag="JN001_004158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9055156.1"
                     /translation="MNKIKNYRWHMIALVCFITVINYLDRTALGIAAPTIMETTGITK
                     EQYSWIVSAFQLAYTLGQPVMGFFIDTVGLKLSFAICAAIWGLATMGHALTGTWSGLA
                     FMRALMGFSEASAIPAGVKTASTWFPAKERGVATGVFNMGTSLGAMLAPPLIAWCIMF
                     HSWQFAFIVSGSLALLAALFWFFCYKDPKDAKRLSDEERHYIESGQEQHLKTDKKEKT
                     SIKHILSQRNFWGIGIARFLADPAWGTINFWVPIFFVETLHFSLKEIAMFVWLPFLLG
                     DLGCLASGFVAKFFHDRGVSLINSRRITFTIAAVIMMTIGLVSIVENPYIAVLLISIG
                     AFSHQCLSTVAATLGGDLFKKDEVATAVGMAGACAWSGQLIFNLFIGAFVHIIGFAPF
                     FIALAFFDIIGAIALWTLIKVKDEEPQVQLATH"
BASE COUNT          447 a          368 c          372 g          528 t
ORIGIN      
        1 ttttaaaggg agaaatttac acacaataat tttcaatatt tcctctgtac ctgattttta
       61 ttacctatta cacggaaata ccaacaacca gggtttatta atataattaa aaggtttaaa
      121 catgaataaa ataaagaatt accggtggca tatgattgcc ctcgtatgct ttatcactgt
      181 aatcaattat ctggacagaa cggcgttagg tattgcggct ccaacgatta tggagacaac
      241 cggaataact aaagagcaat attcatggat tgtcagtgca ttccagttgg cctatacatt
      301 agggcaaccg gtaatgggct tctttattga taccgtgggt ctgaagttaa gttttgcgat
      361 atgtgccgca atttggggcc tggcgacaat gggccatgca ctaaccggaa cgtggtctgg
      421 tctggcattt atgcgcgccc tgatgggttt cagcgaagcg tcggcaattc cggcgggtgt
      481 aaaaaccgca tcaacatggt tcccggcaaa agagcgtggc gtggcgacag gtgttttcaa
      541 tatgggcacc tcactcggcg cgatgcttgc tccaccgttg attgcctggt gcattatgtt
      601 tcatagctgg caatttgcgt ttattgtttc aggtagtctt gctttgctcg cggctttatt
      661 ttggttcttt tgttataaag atccgaaaga tgccaaacgc ctttctgatg aagagcgcca
      721 ctatattgaa tcagggcaag aacagcatct taaaacagat aagaaagaaa aaacgtcaat
      781 caagcatatc ctcagccaac gtaatttctg ggggattggc atcgcgcgtt ttctcgcaga
      841 cccggcatgg ggaaccatta acttctgggt gccgattttc ttcgtcgaaa cgctgcattt
      901 tagcctgaaa gaaattgcca tgttcgtctg gctgcctttc ctgctgggcg atctcggctg
      961 tttagccagt ggttttgtcg cgaagttctt ccacgatcgc ggcgtgagtt taattaactc
     1021 acgaagaatt accttcacta ttgcagccgt cattatgatg acgattggcc tggtgagtat
     1081 tgtcgaaaat ccctacattg ccgtattact gattagtatt ggcgcgttct cgcatcaatg
     1141 tctttctact gtagcagcaa ctctgggtgg cgatctgttc aaaaaagacg aagtagctac
     1201 cgcagtgggt atggcaggag cctgtgcgtg gagcggtcag ttgattttca acctgttcat
     1261 cggggcattc gttcacatta tcggcttcgc gccgttcttt attgccctgg ctttctttga
     1321 cattattggt gctattgcgt tgtggacgct tatcaaagtt aaagatgaag aaccacaagt
     1381 acagttagct acccactaat tattttaaat aaaaacgcta taattgaggt tatggcgttt
     1441 ttaaagaagc ttgagttatc gaaccccgct taccaacgcg ttgtcagtca tctcccccct
     1501 ccctggtgca tcgttatatc cgtgatgagc gatttttgat attaatatct ttcaccatcc
     1561 gctattttca ccacttcaga aaacaaactt atttttatta atatcaattc tttttctttg
     1621 aacattcaac tgcgatattt gtaaaaacat taaacaggca acaataaaat gacattacca
     1681 acaactattt attcattccc cgcatattta cctcg
//
LOCUS       DADMJE010000297         1667 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.302, whole genome shotgun sequence.
ACCESSION   DADMJE010000297 DADMJE010000000
VERSION     DADMJE010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.302"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            13..1268
                     /locus_tag="JN001_004159"
                     /pseudo
     CDS             13..1268
                     /locus_tag="JN001_004159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000535347.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="YccE family protein"
     gene            1561..>1667
                     /locus_tag="JN001_004160"
     CDS             1561..>1667
                     /locus_tag="JN001_004160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine acid phosphatase"
                     /protein_id="HAY9055157.1"
                     /translation="MNKTLIAAAVAGIVLLASNAQAQTVPEGYQLQQVL"
BASE COUNT          546 a          263 c          342 g          516 t
ORIGIN      
        1 tagacgctat atatgggtag taatatacat ggaattagtt gcactgcaaa taattatttg
       61 aaacaggcct ggaacgatat aaaaaatgag tacgaaaaaa atcaaacata ttcaatcacg
      121 ctttttgaaa acacactggt gtgttttatg cggttataca atgaactcag acgtaaagta
      181 aatgaagagg atactccatg tctggaatgt gaatcactag aaaaagaatt tgaggaaatg
      241 cagaatgata atgatctatc attatttatg agaacattgc gtactaatga tacacaaatt
      301 tattcagggt ttcaggaggt attacatata ctatacaata tgttcaaaat gttgatattg
      361 ttagagtgtc cttgccgggc agaggttcag agtctatcac agattttaaa ggttattatt
      421 ggtatggctt tatggaatat attgaaaaca ttactgcgtg tgatgatgtt ttttctgagt
      481 attgtttaga tgatgaaaat atgagtatcc agccagaaca gataaatacg ccgggaatat
      541 ctgatttaga tactggtatt gatttgtctg gcatatcttt tattcagagt gaaattaata
      601 aaacatatgg attaaaatac gctccagtag atggcgatgg atattgtctg ttaagagcca
      661 tactggtttt aaaagaacat gagtattcat gggcgctggg cggccataag acgcaaaagc
      721 aagtatacga agagtttatt aaaattgttg ataaacaaac gatcgaggct cttgttgata
      781 cggcattcta taatctcagg gaagatgtaa agacgttatt tggcgttaat ctacaatctg
      841 acaacaaaat tcaggggcag ggtggttttt tatcatggag ttttttgtct tttaaaaaag
      901 aatttattga tagttgcttg aatgacaaaa aatgcatact gcatttaccc gaatttatat
      961 ttaatgataa caaggtacgc cttgttttag acaccgaccc agagcagagg gttaatgagg
     1021 tgaaaaattt cctcactgct ctttcagata gcatttgctc attatttatt gttaatagta
     1081 atatggcatc aatctccttg gggaatgaat ccttttcaac agatgacgac cttgagtatg
     1141 gttatttaat aaacactggc aatcattatg atgtttacct ccctcctgaa ctttttgctc
     1201 aggcttataa gttaaaaaat aaggaaatga atgcgcaact cgactattta aatcgttatg
     1261 caatttaatg gcaaaggcat atgctaaaaa ccattgttat tagtctcaca cttttttatt
     1321 ggtaaatatt gtctctgtat tggtaacgcc gcagatattc tgtttagcca caggtgcaat
     1381 tatcagcggc gtacgcgagg caggggctaa tcaggcatag tttgcgtcaa accttgcctg
     1441 tttttgaaga tgtatataga aaaacaggcg ttcaacaagc cattttgcga acctgttccc
     1501 ggaaaaaagt catatttctg tcacactctt tagtgattga taacaaaaga ggtgccagga
     1561 atgaacaaaa cgctaatcgc cgcagctgtg gcagggatag ttttactcgc ttcaaacgct
     1621 caggcacaaa ccgtaccgga aggctatcag ctacagcaag tgctcat
//
LOCUS       DADMJE010000298         1648 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.303, whole genome shotgun sequence.
ACCESSION   DADMJE010000298 DADMJE010000000
VERSION     DADMJE010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1648)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1648)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1648
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.303"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..950)
                     /gene="corA"
                     /locus_tag="JN001_004161"
     CDS             complement(<1..950)
                     /gene="corA"
                     /locus_tag="JN001_004161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000947142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium/cobalt transporter CorA"
                     /protein_id="HAY9055158.1"
                     /translation="MLSAFQLENNRLTRLEVEESQPLVNAVWIDLVEPDDDERLRVQS
                     ELGQSLATRPELEDIEASARFFEDDDGLHIHSFFFFEDAEDHAGNSTVAFTIRDGRLF
                     TLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSR
                     VIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKARLPGGQLEQARE
                     ILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIKIFSVVSVVFLPPTLVASSY
                     GMNFEFMPELKWSFGYPGAIIFMILAGLAPYLYFKRKNWL"
     gene            1320..>1648
                     /locus_tag="JN001_004162"
     CDS             1320..>1648
                     /locus_tag="JN001_004162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055159.1"
                     /translation="MAHRLLIGKGMITLNLKRIFLTLTLLPLFSVAADDCALSDPTLT
                     VQAYTVNPQTERVKMYWQKANGEAWGTLHALLADINSQGQVQMAMNGGIYDESYAPLG
                     LYIENGQ"
BASE COUNT          426 a          427 c          412 g          383 t
ORIGIN      
        1 tacaaccagt tcttccgctt aaagtacaga tacggtgcca ggcccgcgag gatcataaag
       61 ataatcgcgc cagggtagcc gaagctccac ttcagttctg gcataaactc aaagttcatg
      121 ccatagctgg aagcaacgag cgtcggcggc aggaatacca cggataccac cgagaagatt
      181 ttgatgatgc ggttctgctc gatgttgata aaacccatcg ccgcctgcat caggaagttc
      241 accttctgga acagagattc gttatgcggc agcagggatt cgatatctcg caggatttca
      301 cgcgcctgct ccagttgtcc acccggtaag cgtgctttac gtaccaggaa gttgagcgcg
      361 cgctgggtat ccatcagaca caggcgtact ttccagccga tatcttccag ttccgccagc
      421 gtggagagcg cctcatcgta ctcatcgccc tgatgccctt ccataatcac ccggctcaac
      481 tgctccaggt cgctatagat attttcaatt tcatctgcca actgttcgat tttggtttcg
      541 aacagatcca gcagcagctc gtaggcgtta ccgtctacca tcgactggct acgggcacgc
      601 atacgataca gacgaaaagc gggcagttca cgctcacgca gagtaaacag acgaccatca
      661 cggatggtaa atgccacagt ggagttaccg gcgtgatctt ccgcatcttc aaagaagaag
      721 aaggagtgaa tatgcaggcc gtcgtcgtct tcaaagaaac gtgccgatgc ttcgatgtct
      781 tccagttccg ggcgggttgc caggctctgg ccaagttcag attgtacacg cagtcgctcg
      841 tcgtcgtccg gttcgacaag atcaatccat actgcattta caaggggttg tgactcttcg
      901 acttccagcc gggtcagtcg gttattttcc agttgaaatg cgctcagcat gaccgggact
      961 cccaatgctt aaaatatcgg acagttcggt gggcacacag aaacaaattg ggtttcagac
     1021 cattaaacag cctgactcag cgcgacggga aaaattgagg tcgctgacaa ccgctaaggc
     1081 tatcagcaaa aagggatagc cttaggagtt gatcctggat gacaggatag tgagccagta
     1141 tctactgggt gtgtccaagg cgaatgtcct cttagaatga tcgtgcgcgc atgttacgcc
     1201 agcaaaattt tgccgtcaac acgcaacaga acaccacaga acaatagttg aacttcgcgc
     1261 tttttggtac tcctcaaggt cgctaacagg ataaaaaaat cccacatcca ggacctataa
     1321 tggcgcatcg gctactcatt ggtaaaggaa tgatcacctt gaatctcaaa cggatttttc
     1381 tcaccctcac cttacttccc ttgttttctg ttgccgctga tgattgcgca ctctcagatc
     1441 cgacgctgac cgtacaggcg tataccgtta atcctcaaac agagcgggtg aaaatgtact
     1501 ggcaaaaagc caatggcgaa gcgtggggaa cgttacatgc tctgctggcg gatattaata
     1561 gtcagggtca ggtgcagatg gcgatgaacg gcggcatcta tgatgaaagc tatgcgccgc
     1621 tcggtttgta catcgaaaac ggtcagca
//
LOCUS       DADMJE010000299         1620 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.304, whole genome shotgun sequence.
ACCESSION   DADMJE010000299 DADMJE010000000
VERSION     DADMJE010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1620)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1620)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1620
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.304"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..1577)
                     /locus_tag="JN001_004163"
                     /pseudo
     CDS             complement(1..1577)
                     /locus_tag="JN001_004163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001433765.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          420 a          411 c          349 g          440 t
ORIGIN      
        1 caaaaaggca aacagatccg aagcgggata atctttttgg ggagaattgt tccagttagc
       61 aatatatccc gacagggggt tatacacctt agggttcatt tcaaaaggca atagcccttt
      121 ccagtcccat tttcccgtac caggaacggg taatcgcgga tcatggcctg attgacgatc
      181 tggataagca ccagtatgaa cataaccaat attgccgttt acatcagcat agtaccagtt
      241 gatggtcagt gcttgtttcg ctactcctgc caatttttgg ccttcatctg atgagtccag
      301 gccagcaaag acgccacctc tttaccatcc catgcgcggg atttagcgta agccgtttgt
      361 gtcgtctggt cagtttggag aatgttgcca tgcaccgtac gccagacagt aaaggtctct
      421 gcctgaccat ttttcaccgt aatggtttcc tcacggctta acattttcac ccacttacaa
      481 ttatgtaagt agtagcctgg tttctctgcc gacagccgtt cagcaaaaat atcgacatca
      541 tcgccgaaac ctgccgttga tccccaggaa atcacaccat tatgaccaaa aaccagccca
      601 ggataggcaa atggtgtatt gccagtgaca tcataaccag caccgtgcag accaatacca
      661 taagtatacg caggcgcata ccagccaaac tgcggaccat ttaccatgat tgctttcgca
      721 tcctgggctt tgcttttgcc gatcacccac atattgctgg tcgttggata ccccgccaga
      781 ccattggcac caccctgtgc aaattgtgca gcaatagttt cccggttctt ccctgctgtt
      841 aacgccagca gtgcgccatc cgcccctttt gctggtcggt caagcattgg tgcaggtaaa
      901 tcgtagcgtg gcaacagagc tgctgtttgc gagttttgct gattaaattt aagtgggtag
      961 ctactctctt gtacggcaat agtggttggc gctgatgggt ttaccagcca tttcaactga
     1021 ttaaataccg ccatgccttg tgatacacca tatttatctt ttaaagccgt tagcagtgcc
     1081 agattatcaa tttcgctagt gctatcagag aagcggtttg ccatggtgcc cacaaatatc
     1141 atcgcgacat caaacggttc ccagcgctta ggagtaaagc caaatgtatt aaactgtttt
     1201 ggtaagagcg tctctggatt ggtatttacc ttatcaatcc aggcattcat tccatcagcg
     1261 tagccttgca gaatggacat atcctctggg gaaagggcat caatttgcgc ccggatagca
     1321 tccggccagt agttacgacg gatatcttta tcaaatttca caaaatcttt gccaagcact
     1381 tccgcgacag tcccttgagt actgcgacgt gccatttcca tctgaaaaag gcgatcttgt
     1441 gctactacat agccatagcc ataaaatagg tgccatgtat cattggcata aatatgcggc
     1501 atgccgtatt catcgcgaac aatctttatc tcacttgacg actgctcagc cagtgcaggt
     1561 aagctccaat aatacatcag ggaagcagta acacagttca cgatcatacg atttctattt
//
LOCUS       DADMJE010000300         1583 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.305, whole genome shotgun sequence.
ACCESSION   DADMJE010000300 DADMJE010000000
VERSION     DADMJE010000300.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1583)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1583)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1583
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.305"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(70..492)
                     /locus_tag="JN001_004164"
     CDS             complement(70..492)
                     /locus_tag="JN001_004164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055160.1"
                     /translation="MKIRHEHIESVLLALAAEKGQAWVANAITEEYLRQGGGELPLVP
                     GKDWNNQQNIYHRWLKGETKAQREKIQKLIPAVLAILPRELRHRLCIFDTLERRALLA
                     AQEALSTAIDAHDDAVQAVYRKAHFSGGGSSDDSVVVH"
     gene            complement(476..703)
                     /locus_tag="JN001_004165"
     CDS             complement(476..703)
                     /locus_tag="JN001_004165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9055161.1"
                     /translation="MLKIDAIAFFGSKTKLANAAGVRLASIAAWGELVPEGRAMRLQE
                     ASGGELQYDPKVYDEYRKAKRPGKVIHENQA"
     gene            780..1187
                     /locus_tag="JN001_004166"
     CDS             780..1187
                     /locus_tag="JN001_004166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9055162.1"
                     /translation="MKNETFGARLLHRRKKLKLSQAALGKLVKVAHVTISQWERDETQ
                     PAGKRLFALSQALQCSPTWLLFGDEDKQPGEPIPDNQPAILTEDQKELLQLFDALPES
                     EQKALLSEMRARVENFNKLFEELLKARKRSANK"
     gene            1390..1542
                     /locus_tag="JN001_004167"
     CDS             1390..1542
                     /locus_tag="JN001_004167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706802.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1391 domain-containing protein"
                     /protein_id="HAY9055163.1"
                     /translation="MDTIDLGNNESLVCGVFPNQDGTFTAMTYTKSKTFKTEAGARRW
                     LAKNTS"
BASE COUNT          445 a          414 c          327 g          397 t
ORIGIN      
        1 ccgaaccttc ctccggatat aatctgtgat tccccaatca acagaaccag aggaggttcg
       61 gcataaacat caatgcacaa cgacagaatc gtcggacgac ccaccaccgc tgaaatgtgc
      121 tttccggtaa acggcctgaa ctgcgtcatc atgcgcatca attgccgtac tcaacgcttc
      181 ctgcgccgcc agtaatgcac ggcgttccag ggtatcgaag atacagagtc ggtgacgcag
      241 ctcacgcgga agaattgcca gaaccgcagg gatcagtttc tgaattttct ccctttgcgc
      301 tttcgtttca cctttcaacc aacggtgata gatattctgc tgattgttcc agtccttgcc
      361 tggtaccaga ggcaattcgc cgcccccctg ccgcagatat tcttcagtaa ttgcgttagc
      421 gacccacgcc tgcccttttt cggctgccag ggctaacagc actgattcga tgtgctcatg
      481 cctgattttc atgaatcacc ttcccaggtc gttttgcctt acgatattcg tcataaactt
      541 tggggtcgta ctgaagttcc ccgccagatg cctcttgcag gcgcatcgcg cggccttcag
      601 gaaccagttc cccccatgca gcaatgcttg ccagcctaac tcctgcggca ttggcaagct
      661 ttgttttgct gccaaaaaac gctatagcat caattttcaa catatcgagc tccttagatt
      721 ttcctaagga aactagatcg tagagaaacc taagtcaaga aagattagaa ttccctaata
      781 tgaaaaacga aaccttcggt gctcgcctct tacataggcg taaaaaatta aaactgtctc
      841 aggccgcatt aggtaagctg gtcaaagtgg ctcacgtaac aatttctcaa tgggaaagag
      901 atgaaacaca gccggcgggg aaaagattat tcgcactgag ccaagcgctt cagtgctcac
      961 cgacttggct tctttttggg gatgaagata aacaaccagg cgaaccgatc ccggataatc
     1021 agccagccat tctgacagaa gatcaaaaag agttacttca actgttcgac gcactgcctg
     1081 agtcagagca aaaggccctg ttgtcagaga tgcgtgctcg agttgaaaat ttcaacaaac
     1141 tttttgaaga actactcaaa gctcgcaaaa gaagcgcaaa caaataatcc ccttttttct
     1201 ccacaccctg taataaaaag cacaaacttt caaacacttg tgttttttac atcaaaaaaa
     1261 cttaggtttt tatacataaa atcttgactc cacgtcttag gttattctaa atttcattca
     1321 tcaagacacc gcacggtgtt ctcagcaaac agttccacta ccccggcgtt aaggggaaat
     1381 gaggtcagca tggatactat cgatcttggc aacaacgaat ccctagtgtg tggcgtgttt
     1441 cccaatcagg acggcacatt caccgccatg acgtatacca aaagcaaaac gtttaaaacc
     1501 gaagctggcg cacgtcgctg gcttgccaaa aataccagct aatccattta ttggattaat
     1561 tcaatattct cgctgtagag gta
//
LOCUS       DADMJE010000301         1573 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.306, whole genome shotgun sequence.
ACCESSION   DADMJE010000301 DADMJE010000000
VERSION     DADMJE010000301.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1573)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1573)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.306"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..90
                     /gene="yoaK"
                     /locus_tag="JN001_004168"
     CDS             <1..90
                     /gene="yoaK"
                     /locus_tag="JN001_004168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YoaK family small membrane protein"
                     /protein_id="HAY9055164.1"
                     /translation="GIIFPVVIFITAVVFLAWFFIGGYAAPGA"
     gene            93..167
                     /gene="yoaJ"
                     /locus_tag="JN001_004169"
     CDS             93..167
                     /gene="yoaJ"
                     /locus_tag="JN001_004169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002791243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein YoaJ"
                     /protein_id="HAY9055165.1"
                     /translation="MKKTTIIMMGVAIIVVLGTELGWW"
     gene            complement(226..474)
                     /locus_tag="JN001_004170"
     CDS             complement(226..474)
                     /locus_tag="JN001_004170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HAY9055166.1"
                     /translation="MGILSWIIFGLIAGILAKWIMPGKDGGGFFMTILLGIVGAVVGG
                     WISTLFGFGKVDGFNFGSFVVAVIGAIVVLFIYRKIKS"
     gene            complement(622..804)
                     /locus_tag="JN001_004171"
     CDS             complement(622..804)
                     /locus_tag="JN001_004171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1869 domain-containing protein"
                     /protein_id="HAY9055167.1"
                     /translation="MGKATYTVTVTNNSNGVSVDYETETPMTLLVPEVAAEVIKDLVN
                     TVRSYDTENEHDVCGW"
     gene            complement(808..1168)
                     /gene="yeaR"
                     /locus_tag="JN001_004172"
                     /pseudo
     CDS             complement(808..1168)
                     /gene="yeaR"
                     /locus_tag="JN001_004172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310533.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1971 domain-containing protein"
     gene            complement(1341..>1573)
                     /locus_tag="JN001_004173"
     CDS             complement(1341..>1573)
                     /locus_tag="JN001_004173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LysE family transporter"
                     /protein_id="HAY9055168.1"
                     /translation="FFVQFIDVNAPHTGISFFILATTLELVSFCYLSFLIISGAFVTQ
                     YIRTKKKLAKVGNSLIGLMFVGFAARLATLQS"
BASE COUNT          432 a          374 c          350 g          417 t
ORIGIN      
        1 ggtattattt ttccggttgt aatctttatt acagcggtcg tatttttagc atggtttttt
       61 attggcggct atgctgcccc gggggcataa agatgaaaaa aacaacgatt attatgatgg
      121 gtgtggcgat tattgtcgta ctcggcactg agctgggatg gtggtaacgt cacctctaaa
      181 aaatagcaaa ggctgcctgt gtgcagcctt tgtgcaattt aagcgttaac ttttaatctt
      241 cctgtagata aatagcacga caatcgcacc aataacggca accacgaagc tgccaaaatt
      301 gaagccatcg actttaccaa agccaaacag cgtgctgatc catccgccga ctacggcacc
      361 gactatcccc agcaggatag tcataaagaa tccaccacca tctttacctg gcatgatcca
      421 cttcgccaga ataccggcaa taagcccaaa aataatccat gacagaatgc ccattgtttc
      481 ctcacttatc tgttttgcat tagcgggtta gtcgctgata aaaagcatag cacaacatcg
      541 ggagggcaag atttgtgacg agcatcacgg aggatttttt tgcgatggcg cagaaattgc
      601 gccatcaacg atcagtgata attaccaacc acaaacatca tgttcgtttt ccgtgtcata
      661 agaacgcacg gtattcacca gatcttttat cacttcagcc gccacttctg gcaccagcaa
      721 agtcatcggc gtctctgttt cataatcgac agaaacgcca ttactgttat tggtgacggt
      781 cacggtatac gttgctttgc ccatgattca tttcccgtta tgaatgactt tccgttgttg
      841 cgcaccttcc atcaggactt caggagccac gaagaagtca atgttgacat aagtatcgtc
      901 agtcatggct tcaatgttgt gccacttttc tggagggaac accgcaaact gccccgcttc
      961 gataaggatc acctgatcag gctctgcact gtgttcatca gcgtagccga gatatttgac
     1021 cgccccatgc ataacggaaa ggcgtgggta acccccctgg cgcgttcctt tatcaagatg
     1081 acgttcgaat tattccggca ggcgcagttt gtttattcca gaaaggcgtt gagcgcgtat
     1141 gaatataatt ctgtgggatt tgcagcatcc ttttccctcc ttcggtgaat gcgctgaaaa
     1201 cggtttattc cagccgtttc agggtacgcc tgataatttg cattttaaat accatttatt
     1261 ggttactttt tagcaccata tcagagaaaa atcagggagg attacaagtg ggaagcccgc
     1321 gacaacgcgg gctgaatgta tcaggattgc agcgtcgcca gtcgggcggc gaaacccacg
     1381 aacatcaaac caatcagtga gttgccaact ttagccagtt tctttttggt acgtatgtac
     1441 tgcgtgacaa aagcaccaga aataatcagg aagctcaaat agcagaaact caccagttcc
     1501 agcgtcgtcg ccagaataaa gaatgaaatt cccgtatgtg gggcattaac atcgataaac
     1561 tgtacgaaaa acg
//
LOCUS       DADMJE010000302         1557 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.307, whole genome shotgun sequence.
ACCESSION   DADMJE010000302 DADMJE010000000
VERSION     DADMJE010000302.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1557)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1557)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1557
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.307"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(38..316)
                     /locus_tag="JN001_004174"
     CDS             complement(38..316)
                     /locus_tag="JN001_004174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707474.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1161 domain-containing protein"
                     /protein_id="HAY9055169.1"
                     /translation="MKLSTCCAALLLALASPAVLAAPGSCERIQSDISQRIINNGVPE
                     SSFTLSIVPNDQVDQPDSQVVGHCANDTHKILYTRTTSANVSAPAQST"
     gene            424..1134
                     /locus_tag="JN001_004175"
     CDS             424..1134
                     /locus_tag="JN001_004175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416102.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YnfC family lipoprotein"
                     /protein_id="HAY9055170.1"
                     /translation="MKYKLLPCLLAIFLTGCDRTEVTLSFTPEMASFSDEFDFDPLRG
                     PVKDFTQTLMDEQGEVTKRVSGTLSEEGCFDSLELLDLENNTVVALVLDANYYRDAET
                     LEKRVRLQGKCQLAELPSAGVSWETDDNGFVIKASSKQMQMEYRYDDQGYPLGKTTKS
                     NDKTLSVSATPSTDPIKKLDYTAVTLLNNQRVGNVKQSCEYDSHANPVDCQLIIVDEG
                     VKPAVERVYTIKNTIDYY"
     gene            complement(1137..>1557)
                     /gene="speG"
                     /locus_tag="JN001_004176"
     CDS             complement(1137..>1557)
                     /gene="speG"
                     /locus_tag="JN001_004176"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HAY9055171.1"
                     /translation="TTSHIHDQSERRFVVECDGEKAGLVELVEINHVHRRAEFQIIIS
                     PEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRKLGFTVEGELMHE
                     FFINGQYRNAIRMCIFQHQYLAEHKTPGQTLLKPTAQ"
BASE COUNT          426 a          338 c          383 g          410 t
ORIGIN      
        1 cgataatgta ttactgcggt tcggcaggcg cgccatccta ggtagactgc gcgggagcag
       61 agacgttagc gctggtggtg cgggtgtaga gaattttatg cgtatcatta gcacaatgcc
      121 cgacgacctg ggaatcaggc tgatcaacct ggtcattggg tacaatactt aatgtgaagc
      181 tgctttcggg tacgccatta ttgataatgc gctgtgatat atcgctctgt atgcgctcac
      241 aggatcccgg cgcggcgagt accgcgggtg aggcgagggc gagcagaagc gcggcacagc
      301 aggttgagag tttcatcata agctccttac gcgaagataa cttctttaag catagcattt
      361 aacgtgtaaa gtactgtatt tgctactatg attgagaatc atctctactc tctggtgact
      421 gttgtgaaat acaaattact accatgctta ctcgcgatat tcctcacagg atgtgaccgc
      481 acagaggtaa cactttcatt tacccctgag atggccagtt tctctgatga attcgatttt
      541 gatccgctgc gtggtccggt aaaagatttc actcagacat taatggatga gcaaggtgaa
      601 gtgacgaaac gtgtttctgg gactttgtcg gaagaaggct gttttgattc actcgaatta
      661 ctggatctgg aaaataatac cgtggtcgct ctggtactgg acgccaatta ttaccgtgat
      721 gccgagacgc tggagaagag agtacgttta cagggaaaat gccagctagc agaattacct
      781 tctgccgggg tgagttggga aaccgatgat aatggcttcg tgattaaagc cagcagcaaa
      841 caaatgcaga tggaatatcg ctatgatgat cagggttatc cactgggtaa aaccacgaaa
      901 agtaacgaca aaacattatc tgtcagcgcc acgccatcaa cggacccgat caaaaaatta
      961 gattacacag cggttacttt actgaataat caacgagttg gtaatgtaaa acagagctgt
     1021 gaatatgaca gtcacgccaa tccggtggac tgtcagctga tcattgttga tgaaggagta
     1081 aaacccgccg tcgaacgggt ttacaccatc aaaaatacga tcgattatta ttaatgctat
     1141 tgtgcggtcg gcttcaggag agtctgaccc ggtgttttgt gctctgccag atactgatgc
     1201 tggaatatac acatgcgaat ggcattacga tattgaccat taataaaaaa ctcatgcatc
     1261 aattcacctt caaccgtaaa gccaagcttg cggtaaatgt gaatcgcttt ttcattctct
     1321 ttatcgacga tcagatacag cttatagaga ttgagaacgg tgaagccata gtccattgct
     1381 aatttggcgg cacgggttgc cagacctttc ccctgatact ccggggagat aattatctga
     1441 aattctgccc ggcgatgtac atggttaatt tccaccagct ccaccagacc ggctttttcg
     1501 ccgtcacatt ccaccacaaa gcgtcgttcg ctctgatcgt gaatatgtga agtggtc
//
LOCUS       DADMJE010000303         1549 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.308, whole genome shotgun sequence.
ACCESSION   DADMJE010000303 DADMJE010000000
VERSION     DADMJE010000303.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1549)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1549)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1549
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.308"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(328..453)
                     /locus_tag="JN001_004177"
     CDS             complement(328..453)
                     /locus_tag="JN001_004177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001431667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication protein"
                     /protein_id="HAY9055172.1"
                     /translation="MWLPVLFRFLVDSLATLGHRLAASGITSRMLSVIPVLFFWG"
     gene            956..1432
                     /locus_tag="JN001_004178"
     CDS             956..1432
                     /locus_tag="JN001_004178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000469298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HAY9055173.1"
                     /translation="MFIDSEKRLKQLSDEAKKNTEDLEEAKKNSRFTQVSPKGWERVR
                     ELLKDSQGISALKLYSFLAEHIDPTCGAVVADQQFLAEKLGVSRSTIIRWLNYLESKN
                     ALVRIPVAGKVCAYALDPHEVWKGYNTTKNHAAFVTKTLVNKDGDIQRRIMAMFSN"
BASE COUNT          402 a          383 c          403 g          361 t
ORIGIN      
        1 aaaaaaaacc gagccgccac ggttccggcc gcgccttgag cgctaccgga aaccgtctgg
       61 ggagaacccc agacccccat cgctgcaaca ccgacggtct acgaccacct accaaccgca
      121 tggctgcctg ttccgtgcaa atgagctttg cagggggctg gcgcggttcc tggcgacctg
      181 aaagcccctg gttaggggta tcggcgcgct tgacctcctg agagcctctg taagcgtttt
      241 tcgcgccttc catgccctgg cgggcatcta aaacccgttt cgtgcgtctg agagcttttg
      301 agcgcgtttg aggggctatc tggcgactca tccccaaaag aacaacaccg ggatcaccga
      361 caacatgcga gaggtgatcc cgctcgccgc aagtcgatga ccgagcgtag cgagcgaatc
      421 gacgaggaag cggaagagaa ctggaagcca cattgagcac ttacgcactg atgcggggtg
      481 tcggggtgaa gccctgacca agtggtaatc gtatcggcgt gcatgcgcgg ttatacgatt
      541 acacatcctg tcccgatttc tgaggcgttt taacggtgaa cggacggcaa aaacacgatg
      601 gagctgttga acgtgaaaac cacgaaatct ggcaaaaatc acggctggcg aggcttgcat
      661 aggagtaagc cagtatacac tccgctatcg ctacgtgact gggtcagggc ttcgccccga
      721 cacccccaaa gggcgttgcg ttgcacgcaa cacccttacc tagaatagat cttttacgcc
      781 gatttgtaag tggttgtttt tttagtgtgt tttttattta cctgtcgcat ccaggatgac
      841 acaacgttgt cgcatcctgg atgcgacaac acgcaacaag gtgttgcata gatgtgtcat
      901 gatggcttag atttgaacca acgttagtgc atgggatttt cagagggaaa aaatcatgtt
      961 tattgattca gaaaaacgac tgaaacaact ttcagatgag gcaaagaaaa acaccgagga
     1021 tctcgaagaa gcaaagaaaa attcaaggtt tacacaggta tccccaaaag gttgggaacg
     1081 tgttcgagag ctgctgaagg atagccaagg catatcagca ctgaagctgt actcattttt
     1141 agcggagcat atcgatccta cgtgtggcgc tgtcgttgcg gatcagcaat ttctagctga
     1201 aaaacttgga gttagcagaa gcacaattat tcggtggctc aattacttag aatcaaaaaa
     1261 tgcattagtt agaatccccg ttgctggtaa ggtttgtgcg tatgccctcg atccacatga
     1321 agtctggaag ggatacaaca ctacgaaaaa ccatgcagcg tttgtcacta aaacactggt
     1381 caacaaagac ggtgatattc agcgccgaat catggccatg ttttcaaatt gagctagcgg
     1441 caggcggaca atcaggggct acgtgttaac gttctgacca tgattgtcta tcctgcattg
     1501 ctcttttgcc gcctcaaaat cctttgcgtg tttttgctcc ccgttctcc
//
LOCUS       DADMJE010000304         1548 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.309, whole genome shotgun sequence.
ACCESSION   DADMJE010000304 DADMJE010000000
VERSION     DADMJE010000304.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1548
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.309"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1307
                     /locus_tag="JN001_004179"
     rRNA            <1..1307
                     /locus_tag="JN001_004179"
                     /product="16S ribosomal RNA"
     gene            1381..1456
                     /locus_tag="JN001_004180"
     tRNA            1381..1456
                     /locus_tag="JN001_004180"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:1415..1417,aa:Glu,seq:ttc)
BASE COUNT          386 a          362 c          470 g          330 t
ORIGIN      
        1 cttgttggtg gggtaacggc tcaccaaggc gacgatccct agctggtctg agaggatgac
       61 cagccacact ggaactgaga cacggtccag actcctacgg gaggcagcag tggggaatat
      121 tgcacaatgg gcgcaagcct gatgcagcca tgccgcgtgt atgaagaagg ccttcgggtt
      181 gtaaagtact ttcagcgggg aggaagggag taaagttaat acctttgctc attgacgtta
      241 tccgcagaag aagcaccggc taactccgtg ccagcagccg cggtaatacg gagggtgcaa
      301 gcgttaatcg gaattactgg gcgtaaagcg cacgcaggcg gtttgttaag tcagatgtga
      361 aatccccggg ctcaacctgg gaactgcatc tgatactggc aagcttgagt ctcgtagagg
      421 ggggtagaat tccaggtgta gcggtgaaat gcgtagagat ctggaggaat accggtggcg
      481 aaggcggccc cctggacgaa gactgacgct caggtgcgaa agcgtgggga gcaaacagga
      541 ttagataccc tggtagtcca cgccgtaaac gatgtcgact tggaggttgt gcccttgagg
      601 cgtggcttcc ggagctaacg cgttaagtcg accgcctggg gagtacggcc gcaaggttaa
      661 aactcaaatg aattgacggg ggcccgcaca agcggtggag catgtggttt aattcgatgc
      721 aacgcgaaga accttacctg gtcttgacat ccacggaagt tttcagagat gagaatgtgc
      781 cttcgggaac cgtgagacag gtgctgcatg gctgtcgtca gctcgtgttg tgaaatgttg
      841 ggttaagtcc cgcaacgagc gcaaccctta tcctttgttg ccagcggtcc ggccgggaac
      901 tcaaaggaga ctgccagtga taaactggag gaaggtgggg acgacgtcaa gtcatcatgg
      961 cccttacgac cagggctaca cacgtgctac aatggcgcat acaaagagaa gcgacctcgc
     1021 gagagcaagc ggacctcata aagtgcgtcg tagtccggat tggagtctgc aactcgactc
     1081 catgaagtcg gaatcgctag taatcgtgga tcagaatgcc acggtgaata cgttcccggg
     1141 ccttgtacac accgcccgtc acaccatggg agtgggttgc aaaagaagta ggtagcttaa
     1201 ccttcgggag ggcgcttacc actttgtgat tcatgactgg ggtgaagtcg taacaaggta
     1261 accgtagggg aacctgcggt tggatcacct ccttacctta aagaagcgta ctttgcagtg
     1321 ctcacacaga ttgtctgata gaaagtgaaa agcaaggcgt cttgcgaagc agactgatac
     1381 gtccccttcg tctagaggcc caggacaccg ccctttcacg gcggtaacag gggttcgaat
     1441 cccctagggg acgccacttg ctggtttgtg agtgaaagtc acctgcctta atatctcaaa
     1501 actcatcttc gggtgatgtt tgagatattt gctctttaaa aatctgga
//
LOCUS       DADMJE010000305         1527 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.310, whole genome shotgun sequence.
ACCESSION   DADMJE010000305 DADMJE010000000
VERSION     DADMJE010000305.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1527)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1527)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1527
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.310"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1189)
                     /locus_tag="JN001_004181"
     CDS             complement(<1..1189)
                     /locus_tag="JN001_004181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011379332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SopA family protein"
                     /protein_id="HAY9055174.1"
                     /translation="MLREVSISNDTISVKFYRNEKIECACNFLMDKDSQGYIDLSDFD
                     VTNCHFKGDVISKVSFLSSNLQHVTFECKEIENCNFTKATVDNVIFKCRRLHNVIFLK
                     TSGECVDFSQDILDTVDFSQSQLGHSNFRECQIRNSNFDNCYLYASHFTRAEFLSAKE
                     ISFIKSNLTAVMFDHVRMSTGNFKDCITEQLELTIDYSDIFGNEDLDGYINNIIKMID
                     TLPDNAMILKSVLAVKLVMQLKILNIVNKNFIENMKKTFSHCPYIKDPIIRSYIHSGE
                     DNKFDDFMRQHRFSKVDFDTQQMIHFINRFNMNKGLIDKNNNFFIQLIDQALRSTDDM
                     IKANAWYLYKEWIRSDDVSPIFIETEEKLRTFNTNKLTRNDNIFILFSSVDDGPVMVV
                     SSQR"
     gene            complement(1192..1386)
                     /locus_tag="JN001_004182"
     CDS             complement(1192..1386)
                     /locus_tag="JN001_004182"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055175.1"
                     /translation="MIGHITNSGGNNSLMKHDVVQGNNIVDLDLLRNFNGVTGLNRDN
                     FIYISDIFLNIKQRNEKIMQ"
BASE COUNT          525 a          266 c          224 g          512 t
ORIGIN      
        1 agcgctggga gcttaccacc ataacaggcc catcatcgac agaggagaac aggataaata
       61 tattatcgtt tcgtgttaat ttattagtgt taaaggttct taacttttct tcagtttcta
      121 taaatatagg tgaaacatca tcactacgaa tccactcttt ataaagatac caggcatttg
      181 ctttgatcat atcatccgtt gatcgtaagg cctgatcgat aagttggata aaaaaattgt
      241 tatttttatc aatcagccct ttattcatat taaacctgtt aataaaatgg atcatctgtt
      301 gggtatcgaa atccaccttg ctgaatcgat gttgacgcat aaaatcatcg aacttgttat
      361 cttcaccaga atggatataa ctgcgtataa ttggatcttt tatataagga caatggctaa
      421 atgttttctt catattctca ataaagtttt tattaacaat attaagaatt tttaattgca
      481 taaccagttt tactgccaga acggatttca atatcattgc attatctggc aatgtatcaa
      541 tcatttttat aatgttattg atataaccat cgagatcttc attcccaaat atatctgaat
      601 aatcaatagt taattccaat tgttctgtaa tgcaatcttt aaaattccct gtcgacattc
      661 gcacatgatc aaacataaca gctgtcaaat tcgatttaat aaatgatatt tctttggcag
      721 acagaaactc tgctctggtg aagtgcgaag cgtaaagata acaattatcg aagtttgaat
      781 ttctaatctg acattcgcga aaattactat gaccaagttg actctgcgag aagtcaactg
      841 tatcaagaat atcttggcta aaatcaacac attcgccact cgttttgaga aaaatcacat
      901 tgtgtaaacg tcgacattta aatatgacat tatcaactgt tgccttagta aaattgcaat
      961 tctcaatttc tttacattcg aaagttacat gttgtagatt tgatgataaa aaagacacct
     1021 tagaaataac gtcaccttta aaatgacaat ttgttacatc aaaatcagac aggtcgatat
     1081 acccctgcga atctttatcc atcagaaaat tacaagcgca ttctattttt tcatttctgt
     1141 agaattttac acttatagta tcattactaa ttgagacttc acgtaacata tttattgcat
     1201 gattttttcg ttccgttgtt ttatatttaa aaatatatca ctgatataaa taaagttatc
     1261 tctgtttaaa cctgtcaccc cattgaaatt acgtagtaaa tcaagatcta ctatattatt
     1321 tccttgaacc acatcatgtt tcatcaaaga gttattgcca ccagaatttg tgatatgacc
     1381 tatcataaaa cctctgtaat acagaaataa aataacctgg aaaagtagcc tgagcgtcca
     1441 gacactaccg gcgaaaggaa aagaatctct gataaggcat tgagataatg gacattctta
     1501 gtgaagaaga agtgaagtac tataaaa
//
LOCUS       DADMJE010000306         1496 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.311, whole genome shotgun sequence.
ACCESSION   DADMJE010000306 DADMJE010000000
VERSION     DADMJE010000306.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1496)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1496)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1496
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.311"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..1494
                     /gene="pdeB"
                     /locus_tag="JN001_004183"
     CDS             <1..1494
                     /gene="pdeB"
                     /locus_tag="JN001_004183"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308537.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-guanylate-specific phosphodiesterase
                     PdeB"
                     /protein_id="HAY9055176.1"
                     /translation="LPVGLSIWLAHQQVETSFIEELDTYSSRVAIRANKVATQGKDAL
                     QELERWQGAACSEAHLMEMRRVSYSYRYIQEVVYIDNNVPQCSSLEHESPPDTFPEPG
                     KISKDGYRVWLTSHNDLGIIRYMVAMGTAHYVVMIDPASFIDVIPYSSWQIDAAIIGN
                     AHNVVITSSDEIAQGIITRLQKTPGEHIENNGIIYDILPFPEMNISIITWASTKMLQK
                     GWHRQVFIWLPLGLVIGLLAAMFVLRILRRIQSPHHRLQDAIENRDICVHYQPIVSLA
                     NGKIVGAEALARWPQTDGSWLSPDSFIPLAQQTGLSEPLTLLIIRSVFEDMGDWLRQH
                     PQQHISINLESTVLTSEKIPQLLREMINHYQVNPRQIALELTEREFADPKTSAPIISR
                     YREAGHEIYLDDFGTGYSSLSYLQDLDVDILKIDKSFVDALEYKNVTPHIIEMAKTLK
                     LKMVAEGIETSKQEEWLRQHGVHYGQGWLYSKALPKEDFLRWAEQHL"
BASE COUNT          396 a          351 c          367 g          382 t
ORIGIN      
        1 ctgcctgtcg gcttaagcat ctggctggcc catcagcagg tagaaacatc gtttattgaa
       61 gagctggata cctattcctc ccgcgtcgct attcgggcca ataaggtggc gacacaaggg
      121 aaagatgcgc tgcaagagct ggaaagatgg caaggcgctg cctgtagcga agcccatctc
      181 atggaaatgc gtcgggtatc ttacagttat cgctatattc aggaagtggt ttatatcgat
      241 aacaacgttc cccagtgttc gtctctggag catgaaagtc cgcccgatac cttccccgag
      301 ccaggtaaaa tttcgaaaga tggttatcgt gtctggttaa catcgcataa cgatttaggc
      361 attatccgtt acatggtcgc catgggaacg gcacattatg tcgtcatgat cgaccccgct
      421 tcctttattg atgtcattcc ctatagctca tggcaaattg atgccgccat tattggcaat
      481 gcccataacg ttgtcataac cagcagcgat gaaattgctc agggaattat taccaggcta
      541 caaaaaacac ccggtgagca tatcgaaaat aatggaatca tttacgatat cctgcccttc
      601 ccggagatga atatttcgat catcacctgg gcttcaacga aaatgttgca gaaaggctgg
      661 catcggcaag tctttatttg gttaccgctc gggttggtga ttggcctgct ggcagcgatg
      721 tttgtgctgc gtattttgcg ccgtatccag tcaccgcatc atcggctgca ggatgctatc
      781 gaaaatcgtg atatttgcgt gcactatcag ccgattgtct ccttagccaa tggcaaaatt
      841 gtcggtgctg aggcactggc gcgctggccg cagacagacg gtagttggtt gtcaccagat
      901 agttttattc cgctggcaca gcaaacaggc ctttctgagc cattgacgct actgattata
      961 agaagcgtct ttgaagatat gggcgactgg ctgcgtcagc atccacagca gcatatttcg
     1021 atcaatcttg aatccaccgt gctcacctcg gaaaaaatcc cgcaattgct gcgtgaaatg
     1081 atcaatcact atcaggttaa tcccagacag atcgcgcttg aactcactga acgcgagttt
     1141 gccgatccga aaaccagcgc cccgataatt tctcgctacc gggaggcggg ccatgaaatt
     1201 tatcttgatg attttggtac gggatattca agtttaagtt atttacagga tctggatgtc
     1261 gacattctga agatcgataa atctttcgtt gatgcgctgg aatataaaaa tgtcacgccg
     1321 catatcatcg aaatggcaaa aacactgaaa ctgaaaatgg tagcggaggg aatcgaaacc
     1381 agtaaacaag aagagtggct acgccagcat ggcgtgcact acggtcaggg ctggctctac
     1441 agcaaggcat taccgaaaga agatttctta cgctgggccg agcaacattt gtgaat
//
LOCUS       DADMJE010000307         1467 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.312, whole genome shotgun sequence.
ACCESSION   DADMJE010000307 DADMJE010000000
VERSION     DADMJE010000307.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1467)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1467)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1467
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.312"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..183)
                     /locus_tag="JN001_004184"
     CDS             complement(<1..183)
                     /locus_tag="JN001_004184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055177.1"
                     /translation="MLEDTTIHNAITDKALASYFRSSGNLLEEESAVLGQAVTNLMWI
                     CPYISRHLLSLNPLQAR"
     gene            complement(212..484)
                     /locus_tag="JN001_004185"
     CDS             complement(212..484)
                     /locus_tag="JN001_004185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YmgA"
                     /protein_id="HAY9055178.1"
                     /translation="MKTSDNERIKYEITGQVVLQILRMKINFSLQTLIKQLLVMKSAE
                     EDAFRRDLIDSIIRDFSNSDSGGPNRRTATADNKSMFNGKKINRIH"
     gene            complement(527..763)
                     /locus_tag="JN001_004186"
     CDS             complement(527..763)
                     /locus_tag="JN001_004186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component-system connector protein YcgZ"
                     /protein_id="HAY9055179.1"
                     /translation="MHQNSVTLDSAGAITRYFAKANWPTQQETLGEIVTEILKDGRNL
                     SRKSLCAKLLCRLEHATGEEEQKHYNALIGLLFE"
     gene            1077..>1467
                     /gene="bluF"
                     /locus_tag="JN001_004187"
     CDS             1077..>1467
                     /gene="bluF"
                     /locus_tag="JN001_004187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue light-responsive regulator BluF"
                     /protein_id="HAY9055180.1"
                     /translation="MLTTLIYRSHIRDDEPVKKIEEMVSIANRRNMQSDVTGILLFNG
                     SHFFQLLEGPEEQVKMIYRAICQDPRHYNIVELLCDYAPARRFGKAGMELFDLRLHER
                     DDVLQAVFDKGTSKFQLTYDDRALQFFR"
BASE COUNT          431 a          297 c          270 g          469 t
ORIGIN      
        1 gcgggcttgt aatgggttaa gtgataacag atgtctggaa atataggggc aaatccacat
       61 taaattggtg acagcctgcc ctaacactgc tgactcttct tctaacaaat tacccgaact
      121 gcgaaagtaa cttgctaacg ctttatcagt tattgcatta tgaattgtag tatcttcaag
      181 catggtaacc tctcatctta cttatgaaat tttaatgtat tctgtttatt ttcttaccat
      241 tgaacatact tttattgtca gctgtcgctg ttcttcggtt tggccctcct gaatcactat
      301 tgctaaaatc acgaattatg ctgtcaatta aatcgcgtcg gaaagcatct tcctcagccg
      361 atttcattac gagtaattgc ttaataagag tctgcaatga aaaatttatc ttcatgcgca
      421 gtatctggag caccacctgg ccagtaattt catattttat acgttcatta tcagatgtct
      481 tcataacgac ttcatagcta acctgttaaa taatcaggct gttgcattat tcaaaaagca
      541 acccaattag tgcattataa tgtttctgtt cctcttcccc agtcgcgtgt tccagtcggc
      601 aaagaagttt ggcacaaagc gactttcgac tcagattacg tccatctttc aaaatctcag
      661 tcacaatttc cccgagagtt tcctgctgag taggccagtt agcttttgca aagtaacgag
      721 tgattgctcc cgcagaatct aaagtcactg aattttgatg catgctacgc ctctgttaaa
      781 aatgttaatc aatgttaagt gaggtaacaa tagcaaactt gtacgaaata tgtgtacaga
      841 atgataaatt aattttttgc aattagtgcc aatacatata aaacaatgtg ttatgataaa
      901 acatattgca tcatttaact gacaatctat acgagatttt tcgccaacta gtgttcaact
      961 ttttccattt tttatcaatg taaagaaacg gttatgtttt ggtattaaaa gaaagacaca
     1021 agaagatatg tctgttaccg tcttactctc gcctcaccca ttaccctgga ttgttaatgc
     1081 ttaccaccct tatttatcgt agccatatac gtgacgacga acctgtcaaa aaaatcgaag
     1141 aaatggtttc gatagcaaat cgcaggaaca tgcagtctga cgtaacaggg atcttactgt
     1201 ttaatggttc tcattttttc cagcttctgg aaggtccgga agaacaggtt aaaatgatat
     1261 atcgggctat atgccaggat ccacggcact ataatattgt tgagctgctg tgcgattacg
     1321 cgcctgctcg ccgttttggc aaagcgggaa tggaattatt tgatttgcgc ctgcacgagc
     1381 gagatgacgt tttacaggcc gtattcgaca aaggcacatc aaaatttcag ctaacttatg
     1441 atgacagagc gctacaattt tttcgta
//
LOCUS       DADMJE010000308         1459 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.313, whole genome shotgun sequence.
ACCESSION   DADMJE010000308 DADMJE010000000
VERSION     DADMJE010000308.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1459
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.313"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..730)
                     /gene="pdeC"
                     /locus_tag="JN001_004188"
     CDS             complement(<1..730)
                     /gene="pdeC"
                     /locus_tag="JN001_004188"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="c-di-GMP phosphodiesterase PdeC"
                     /protein_id="HAY9055181.1"
                     /translation="MSHRARHQLLALPGIIFLVLFPIILSLWIAFLWAKSEVNNQLRT
                     FAQLALDKSELVIRQADLVSDAAERYQGQVCTPAHQKRMLNIIRGYLYINELIYARDN
                     HFLCSSLIAPVNGYTIAPADYKREPNVSIYYYRDTPFFSGYKMTYMQRGNYVAVINPL
                     FWSEVMSDDPTLQWGVYDTVTKTFFSLSKEASAATFSPLIHLKDLTVQRNGYLYATVY
                     STKRPIAAIVATSYQRLITHFYNHL"
     gene            1160..1441
                     /locus_tag="JN001_004189"
     CDS             1160..1441
                     /locus_tag="JN001_004189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313069.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055182.1"
                     /translation="MATLTTGVVLLRWQLLSAVMMFLASTLNIRFRRSDYVGLAVISS
                     GLGVVSACWFAMGLLGITMADITAIWHNIESVMIEEMNQTPPQWPMILT"
BASE COUNT          421 a          321 c          324 g          393 t
ORIGIN      
        1 taagatgatt ataaaaatgg gttataagac gttgatatga agtcgcaaca atggctgcaa
       61 ttgggcgttt tgtcgaataa actgtcgcat ataaatagcc atttctttgt acggttaaat
      121 ccttcaaatg aatcagcgga gaaaacgttg ctgccgaggc ctctttgctt aacgagaaaa
      181 aggttttcgt caccgtatca tacacacccc attgcaatgt cggatcatca gacatcactt
      241 cactccagaa gagagggttg ataaccgcca cataatttcc ccgctgcata taggtcattt
      301 tatagccaga gaaaaaaggc gtatcgcggt aataatagat agaaacgtta ggttcacgct
      361 tataatcggc cggtgcaatc gtatagccgt ttacaggcgc tatcagcgat gagcataaaa
      421 aatggttatc acgggcatag atcaattcat taatataaag atagccacga ataatattca
      481 acattcgctt ttgatgggct ggagtgcaaa cttgcccctg atagcgttca gctgcatcgc
      541 tcactaaatc tgcctggcga atgaccagct cggatttatc cagtgccagt tgagcaaagg
      601 ttcggagctg attattcact tctgattttg cccaaaggaa ggcaatccat agcgaaagaa
      661 tgatgggaaa gagaactaaa aagataatgc ccggcaacgc cagtaattgg tgtcgtgcac
      721 gatgactcat tgctatcaat ttcctgcctg tttatacccg gccattgtaa ggtgaaaacc
      781 ctgggtaccg acgtctttag ataaatctta cggtataaat agcacttttg cctgatttga
      841 aattgatacc tttctaatcg tcacctggat gaaaataatt cattgatatt caaaattaat
      901 ttcctacagg aatgcagagg cggcgggaag atatgccctt aatgccactg aaaaaccaca
      961 taatctgtac agcaataaaa gtcacggcct aatatggcta acaaacaatc aattgtgata
     1021 tatttcacaa aattaatgaa acaaacagag tgtttcattt ttgtgttctg caagccccgc
     1081 gatagccaga gtgtaccacg cctcccgtga acaacgccgc gctgtccagg gcatcggctc
     1141 ttttcagagg aattgtttga tggctaccct caccactggc gtggttcttc ttcgctggca
     1201 acttcttagt gccgtaatga tgtttctggc cagcacactc aacatccgtt ttcgtcggtc
     1261 tgattatgtc gggcttgcgg tgatcagcag cggtctgggc gttgtttccg cctgttggtt
     1321 cgcaatgggg ttgcttggca tcacaatggc ggacatcacc gctatctggc acaacatcga
     1381 gtcggtgatg atagaagaga tgaatcagac accgccacaa tggccaatga ttttgacctg
     1441 atacgtagaa gcctccata
//
LOCUS       DADMJE010000309         1406 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.314, whole genome shotgun sequence.
ACCESSION   DADMJE010000309 DADMJE010000000
VERSION     DADMJE010000309.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1406)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1406)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1406
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.314"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..709)
                     /gene="ipaH9.8"
                     /locus_tag="JN001_004190"
     CDS             complement(<1..709)
                     /gene="ipaH9.8"
                     /locus_tag="JN001_004190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858359.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH9.8"
                     /protein_id="HAY9055183.1"
                     /translation="MLPINNNFSLPQNSFYNTISGTYADYFSAWDKWEKQALPGEERD
                     EAVSRLKECLINNSDELRLDRLNLSSLPDNLPAQITLLNVSYNQLTNLPELPVTLKKL
                     YSASNKLSELPVLPPALESLQVQHNELENLPALPDSLLTMNISYNEIVSLPSLPQALK
                     NLRATRNFLTELPAFSEGNNPVVREYFFDRNQISHIPESILNLRNECSIHISDNPLSS
                     HALQALQRLTSSPDYHGP"
     gene            complement(971..1066)
                     /locus_tag="JN001_004191"
                     /pseudo
     CDS             complement(971..1066)
                     /locus_tag="JN001_004191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase domain-containing protein"
     gene            complement(1102..>1406)
                     /gene="ccdB"
                     /locus_tag="JN001_004192"
     CDS             complement(1102..>1406)
                     /gene="ccdB"
                     /locus_tag="JN001_004192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858358.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="type II toxin-antitoxin system toxin CcdB"
                     /protein_id="HAY9055184.1"
                     /translation="QFKVYAYKRESRYRLFVDVQSDIIDTPGRRMVIPLASARLLSDK
                     VSRELYPVVHVGDESWRMMTTDMASVPIFVIGEEVADLSHRENDIKNAINLMFWGI"
BASE COUNT          387 a          279 c          329 g          411 t
ORIGIN      
        1 gtgggccgtg gtagtccggc gaagaggtta atctttgcag ggcttgcaga gcatgggatg
       61 ataatgggtt atcactaata tgtattgaac attcattcct cagattaaga atgctttccg
      121 ggatatgact tatctgattt ctatcaaaaa aatactctct gacaacggga ttatttccct
      181 cagaaaatgc tggtagctca gtgaggaaat tacgggtcgc tctgagattt ttaagagcct
      241 gtgggagcga tggtaaggag actatttcgt tatagctgat attcatagtc aataacgaat
      301 cgggtaaagc tggcaggttt tccagctcat tgtgttgtac ctgaagtgac tccagcgcag
      361 gaggtagcac gggcaattct gataatttat tgctggcgga atataatttt tttagcgtaa
      421 caggcagttc aggtaggtta gttaattgat tatatgatac attgagcagc gttatctgag
      481 ctggtaagtt gtcaggtagc gaggacagat ttaaacggtc cagtcgaagt tcatcggaat
      541 tattgataag acattcttta agtcgggaga cagcctcatc acgctcttca ccggggagcg
      601 cttgtttttc ccatttatcc catgctgaaa agtaatcagc atatgtaccg gaaatagtgt
      661 tataaaaaga attttggggc aatgaaaagt tattatttat cggtaacatg atgggcatcc
      721 agttaaagcc ggtggacaaa tggctttgtt aaaagaaata agcaggagtt tttatgaagt
      781 tcattccatg aaatgaactt cagcactttt ttattataat aaggataaac aaaattggct
      841 gtaaaaaaac gatactgttt cagttaaccg tgaatggcct gtttgcaccg tattgttctt
      901 gtttttcggt tagttaaaca tcgtacttca tatttgaacg gtaagcggct cgtcagaacc
      961 gtattgatat ttactgagag gtcagatcaa ctttccaggg caacagatcg cgtacccggt
     1021 ttgccggcca gtcttggata tgctcaatga cgtaacgcag ccattttgtc aacgccacga
     1081 tttttgaccc tagcctgaca tttatattcc ccagaacatc aggttaatgg cgtttttgat
     1141 gtcattttcg cggtggctga gatcagccac ttcttccccg ataacgaaga tcggcacact
     1201 ggccatatca gtggtcatca tgcgccagct ttcatccccg acatgcacca ccgggtaaag
     1261 ctcacgggag actttatctg acagcaggcg ggcactggcc agggggatca ccatccgtcg
     1321 tccgggcgtg tcaataatgt cactctgtac atccacaaac agacgataac gactctctct
     1381 tttataggcg taaaccttaa actgca
//
LOCUS       DADMJE010000310         1357 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.315, whole genome shotgun sequence.
ACCESSION   DADMJE010000310 DADMJE010000000
VERSION     DADMJE010000310.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1357)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1357)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1357
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.315"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            76..1020
                     /gene="lpxM"
                     /locus_tag="JN001_004193"
                     /gene_synonym="msbB"
     CDS             76..1020
                     /gene="lpxM"
                     /locus_tag="JN001_004193"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY9055185.1"
                     /translation="MKKYKSEFIPEFKKNYLSPVYWSTWFLLGMIAGISMFPPSFRDP
                     VLAKIGRWAGRLSKKARRRATINLSLCFPEKSDTEREIIVDKMFATALQSIVMMAELA
                     IRGPEKFQKRVFWKGLEILEEIRYNNRNVIFLVPHGWSVDIPAMLLAAQGEKMAAMFH
                     QQRNPVIDYVWNSVRRKFGGRLHSREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFA
                     DFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHFLTIEVRPPMDACIASADNKMI
                     ARQMNKTVEILVGSHPEQYIWVLKLLKTRKSNEADPYP"
     gene            complement(1174..>1357)
                     /locus_tag="JN001_004194"
     CDS             complement(1174..>1357)
                     /locus_tag="JN001_004194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS630 family transposase"
                     /protein_id="HAY9055186.1"
                     /translation="IYQPVYSPWVNHAERLWQALHDTITRNHQCRSMWQLLKKVRHFM
                     ETVSPFPGGKHGLAKV"
BASE COUNT          388 a          265 c          313 g          391 t
ORIGIN      
        1 atttaaatta aggtttgatg tattctctga ataaaacagt aatgataatt ttggtagagg
       61 cattcgcact aaataatgaa aaaatataaa tctgagttta ttcctgaatt taagaaaaat
      121 tatctttccc ctgtttactg gtctacatgg ttccttttgg gaatgattgc aggtatttca
      181 atgtttcccc cttcattcag agatcctgtc ttggcaaaaa tagggcgttg ggcgggcaga
      241 ttgagcaaaa aagctcgtcg cagggcgacg attaatttat cgctttgttt cccagaaaag
      301 agtgatacag aacgggaaat aattgtcgac aaaatgtttg ccacagcatt gcaatccata
      361 gtgatgatgg cagaactggc aattcgtggt ccggaaaagt tccagaaacg agtgttctgg
      421 aaaggcctcg aaattcttga ggaaattcga tacaataaca gaaatgtgat ttttctggtt
      481 ccccatggct ggagcgtgga tattcctgca atgttgctgg cagctcaggg ggaaaaaatg
      541 gccgccatgt ttcatcagca acgaaatcca gtgattgatt atgtctggaa ttctgtacgg
      601 cgtaaattcg gggggcgctt acattcccgg gaggatggga taaaaccatt tattcagtca
      661 gtacgccagg gatactgggg gtattacctt ccagatcagg atcatggtcc tgaatacagt
      721 gaatttgctg atttttttgc gacctataaa gcgacattac caattattgg acgtctgatg
      781 aacatcagtc aggctatgat tataccgctt ttcccggttt atgatgaaaa aaaacatttc
      841 ctgactattg aagttcggcc accaatggat gcatgcattg ccagcgcgga caataaaatg
      901 attgcccgac aaatgaacaa aacagtggaa attttggtgg ggtcacatcc ggaacagtat
      961 atctgggttt taaaattgtt aaaaacgcgc aaatcaaacg aagcggaccc gtacccttga
     1021 aattataaag tacaggtatt tccactagtt gtttcttaca ggttaccaat cgaaacacat
     1081 cccccttccg tgtgttgccc gtttggcacg gaggactgtg tagatgcagt tcgttaaatt
     1141 taatttatgc ctaaatagct gcgcttaata ccgctacact tttgccagtc cgtgtttgcc
     1201 tccggggaat gggctgacgg tttccataaa atggcgaact tttttcaaca gttgccacat
     1261 tgagcggcac tgatgattac gcgttattgt gtcgtgaagt gcctgccata gccgttcagc
     1321 atgattcacc catggcgagt aaaccggctg ataaatg
//
LOCUS       DADMJE010000311         1343 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.316, whole genome shotgun sequence.
ACCESSION   DADMJE010000311 DADMJE010000000
VERSION     DADMJE010000311.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.316"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            86..1005
                     /locus_tag="JN001_004195"
                     /pseudo
     CDS             86..1005
                     /locus_tag="JN001_004195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415843.2"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
     gene            1005..>1343
                     /locus_tag="JN001_004196"
     CDS             1005..>1343
                     /locus_tag="JN001_004196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY9055187.1"
                     /translation="MKHIQIRNSDMAWHIAANIQFPPNFDESKQYPAIISVHPFGSCK
                     EQTSGNIYGKALAEKGYLVLAYDASFQGESGGEPRWIEDPTQRVEDISRVIDYAVTLP
                     YVNAERIGVLG"
BASE COUNT          380 a          302 c          326 g          335 t
ORIGIN      
        1 tttagggtct aatcaactta atgatcaata tctatagtga tatcaccaac cgttaaaacg
       61 aaccgacaac tccatgagga acggaatgat gaataataaa gtcagcttca ctaacagcaa
      121 taatccaacc atctctttgt ctgcagtgat ctatttccct ccaaaatttg atgaaacccg
      181 tcagtatcag gcaattgtgg tatctcaccc aggtggggcg ttaaagaaca aacggccgga
      241 acctatgcca aaaaactggc ggaaaaggga tttgtcacta ttgcttatga cgcatcttat
      301 caaggtgaaa gtggcggcga gccgcgtcag ttagaaaacc catacattcg tactgaagac
      361 atcagtgccg tgattgatta cctgacaacg ctttcttatg tcgacaatac ccgaattggt
      421 gcgatgggaa tttgtgccgg tgcaggatat acagccaatg ctgcaattca ggatcgccgc
      481 atcaaggcca tcggtaccgt tagtgcggtc aatattggtt cgatgttccg taatggttgg
      541 gaaaacaatg tgaaatctat tgatgccctg ccatacgttg aagcgggttc aaacgcccga
      601 accagcgata ttagcagcgg agaatatgcc gttatgccac tggcaccaat gaaggagtcc
      661 gatgcgccga acgaagaact gcgtcaggcc tgggagtatt accacacccc tcgcgcgcag
      721 tatccaacag caccgggtta cgctactttg cgcagcctta accagattat tacctttgat
      781 gcttaccata tggcggaagt gtacctgact cagccgatgc agattgtggc gggcagccag
      841 gcagggagca aatggatgag tgacgatctg tacgatcgag catcaagcca agataaacgc
      901 tatcacattg ttgaaggcgc aaaccatatg gatctttatg acggcaaagc ctatgtggct
      961 gaagcaattt cagtattagc tccgttcttt gaggaaactc tgtaatgaaa catattcaaa
     1021 tccgcaatag tgatatggcc tggcatattg ctgccaatat tcagtttcca ccaaattttg
     1081 atgagtcaaa acagtatccg gcgattatca gcgtccatcc ttttggcagt tgtaaggagc
     1141 agacgtctgg caatatctat ggcaaagcat tggctgaaaa aggctatctc gttctcgctt
     1201 atgacgccag tttccaggga gaatctggtg gggagcctcg ctggatagaa gatccgacac
     1261 agcgcgtaga ggatattagc cgtgttatcg attatgcagt aactctgcca tatgttaatg
     1321 ctgaacgtat tggcgtgctg gga
//
LOCUS       DADMJE010000312         1333 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.317, whole genome shotgun sequence.
ACCESSION   DADMJE010000312 DADMJE010000000
VERSION     DADMJE010000312.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1333)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1333)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1333
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.317"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..173)
                     /locus_tag="JN001_004197"
     CDS             complement(<1..173)
                     /locus_tag="JN001_004197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000460887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055188.1"
                     /translation="MFDYQVSKHPHFDEACRAFALRHNLVQLAERAGMNVQILRNKLN
                     PAQPHLLTAPEIWL"
     gene            complement(206..427)
                     /locus_tag="JN001_004198"
     CDS             complement(206..427)
                     /locus_tag="JN001_004198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001247705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="regulator"
                     /protein_id="HAY9055189.1"
                     /translation="MRPNISITLTTPHVTIERYSELTGLSIDTINDMLADGRLIRHRL
                     RKDKKREKVMINIAAMTVDALSECNLNLN"
     gene            553..1122
                     /locus_tag="JN001_004199"
     CDS             553..1122
                     /locus_tag="JN001_004199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001047316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HAY9055190.1"
                     /translation="MNLEKGGRGAIERMVEAYGFKTRQALCDHLGISKSTLATRYMRD
                     SFPAEWVIQCALETGTSLNWLTTGHGSKQTSGNTNTMEVAKYVLSDGALREDGFYIFD
                     KGFLPSTFKKPFVITDNNSEFICDKEFDDIRDGKWVISIDGEVTIRDITRLPGGRIFV
                     EGGNRAFECKIEDIEIIGKIISLTVKYVR"
     gene            1138..1329
                     /locus_tag="JN001_004200"
     CDS             1138..1329
                     /locus_tag="JN001_004200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055191.1"
                     /translation="MLGKVFFVVLSCSLLLSPLTTYAKNYPCSGKKGGVSHCTSDGKF
                     VCNDGTISKSKKICTKNSR"
BASE COUNT          397 a          240 c          299 g          397 t
ORIGIN      
        1 agccagattt ctggtgcggt taataaatga ggctgagctg ggttcagctt gttccgcaga
       61 atctgcacat tcatgcctgc acgttctgcc agttgcacca gattgtggcg cagtgcaaat
      121 gcacgacagg cttcatcaaa atgtggatgt ttggaaactt ggtaatcaaa catggtcaat
      181 gcctctgatg tatttcagaa tcgaactaat taaggtttag attgcattct gaaagcgcat
      241 caacggtcat tgctgctatg ttgatcatca ctttttcgcg ttttttatct ttgcgcagac
      301 ggtgacggat aaggcgtcca tcagccaaca tgtcattgat ggtatcgatg gatagccctg
      361 tcagctcgct atagcgttca atagtcacat gaggcgtggt aagagtgatt gaaatgttag
      421 gtctcatgat gcaacattcc tcgtttaatg atgattaatc aggacgaata cggatcgttt
      481 gtattttgtg aacaccataa acatatgatt gcacagtgaa atcgtcaaga taaaagttca
      541 cttggagtga ccatgaattt ggagaaaggc ggacgaggcg ccatagagcg catggtagaa
      601 gcttatggat tcaagactcg acaggcgttg tgcgatcatt taggaatctc taaaagtaca
      661 ctcgccacac gctacatgcg tgactcattc ccagcagaat gggtaatcca gtgcgccctt
      721 gaaacgggca cctcgcttaa ttggctcaca accggacatg gttcaaagca aacttcaggt
      781 aatacaaata ctatggaagt tgctaaatat gtattatctg atggtgcctt gcgtgaagac
      841 ggtttttata tttttgataa gggatttcta ccctctacgt ttaaaaaacc ttttgtcatc
      901 acagataaca attctgaatt tatttgtgat aaagaatttg atgacatacg tgatggtaaa
      961 tgggtaataa gtattgatgg cgaagtaacg atccgtgaca ttactcgttt acccggtgga
     1021 agaatcttcg tcgagggtgg aaacagagcc ttcgaatgta agatagaaga cattgaaata
     1081 attggtaaaa ttataagttt aacagttaaa tatgttagat aataccggga ggaaactatg
     1141 cttggtaaag tattttttgt ggttttatca tgctctttgt tattaagccc actaactacc
     1201 tatgctaaaa attatccttg ttctgggaaa aagggaggtg tctctcactg tacctccgat
     1261 ggaaaatttg tttgcaatga tggaactatt agtaaatcca aaaaaatctg tactaaaaac
     1321 tcacgataac ttt
//
LOCUS       DADMJE010000313         1332 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.318, whole genome shotgun sequence.
ACCESSION   DADMJE010000313 DADMJE010000000
VERSION     DADMJE010000313.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1332)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1332)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1332
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.318"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..483)
                     /locus_tag="JN001_004201"
     CDS             complement(1..483)
                     /locus_tag="JN001_004201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HAY9055192.1"
                     /translation="MEINVTAPALLTDEHILQPFDCGNEVLSNWLRGRAMKNQMLNAS
                     RTFVICLEDTLRVVGYYSLATGSVTHAELGRSLRHNMPNPVPVVLLGRLAVDVCIQGH
                     GFGKWLLSDAIHRVVNLADQVGIKAVMVHAIDDDARAFYERFGFVQSVVAPNTLFYKV
                     "
     gene            complement(474..776)
                     /locus_tag="JN001_004202"
     CDS             complement(474..776)
                     /locus_tag="JN001_004202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858193.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1778 domain-containing protein"
                     /protein_id="HAY9055193.1"
                     /translation="MEVFMSTAASVRKTPREHQINIRATDEERAVIDYAASLVNKNRT
                     DFIMELAYQEAKNIILDQRLFVLDNERYDSFITQLEAPVQNAEGRERLMAVKPEWK"
     gene            1048..1320
                     /locus_tag="JN001_004203"
     CDS             1048..1320
                     /locus_tag="JN001_004203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_145811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055194.1"
                     /translation="MSHNLEHQKVHTRMVKEVLKAVARANNHPYKSVFADFITGHPSC
                     TVCFWETFHKMYPDSPYEYVTFCHTCRRFDLYETEAEMKADDPKWW"
BASE COUNT          392 a          334 c          283 g          323 t
ORIGIN      
        1 tcagacttta taaaacaagg tattaggtgc cacaactgac tgaacaaaac caaaacgctc
       61 ataaaatgct ctggcgtcat catcaattgc atgtaccata acagccttaa tgccaacctg
      121 atcagccaga ttgacaaccc ggtgaatggc atcacttagt agccatttac cgaaaccatg
      181 cccctggata caaacatcaa cagccagacg ccctaacaga acaacaggga caggattggg
      241 catgttatgc cgcaaactgc gaccaagctc ggcatgagtg acggaaccag tagctaatga
      301 gtagtatccc acaacacgta aagtatcctc caagcaaata acgaacgtgc gagaagcatt
      361 gagcatctgg tttttcatag cccgaccacg taaccagtta cttagcacct catttccaca
      421 gtcaaatggc tgaagtatat gctcatccgt caacaatgct ggcgcggtga catttatttc
      481 cattcaggct ttaccgccat cagacgttca cgcccttctg cattctgcac aggagcttcc
      541 agttgcgtaa taaacgaatc ataacgttcg ttatccagca caaataaacg ttgatccagg
      601 ataatgtttt tagcttcctg gtacgccagt tccatgatga aatcggtacg gttcttattg
      661 accaagctcg cagcataatc aataacggct cgttcctcat cagttgcccg gatgttaatc
      721 tgatgttctc gcggtgtttt acggacgctt gcagctgtag acataaaaac ctccattggt
      781 aacaatttgc tatgcaatta atgttatcgc aaatggtaac agaacgctat acagaatcac
      841 ttacgggaaa agcgatcccc tgataaaaac aatggcagag acctgaacat tgtgacgatg
      901 atctgtgtcg gcgcacaaat catgtctgat tacggccgtt taatgtgatt ttgataatga
      961 aatgcctgaa ccacggcagc ctggcggctg caaatcgggg tgtggcagaa tatgagcttt
     1021 cagagtaacc atccagaatg agttcccatg tcacacaacc tggagcacca gaaagtccac
     1081 accagaatgg tgaaagaggt tctgaaagcc gtcgccagag ccaataatca cccttataag
     1141 tccgtatttg cagactttat caccggtcat ccctcctgca cggtctgttt ctgggaaacc
     1201 ttccacaaaa tgtacccgga ttcaccgtac gaatacgtca cgttctgcca tacctgccgt
     1261 cgttttgatt tatacgaaac agaagcggag atgaaggcgg atgacccgaa gtggtggtga
     1321 ttttcagccc cg
//
LOCUS       DADMJE010000314         1329 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.319, whole genome shotgun sequence.
ACCESSION   DADMJE010000314 DADMJE010000000
VERSION     DADMJE010000314.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1329)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1329)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1329
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.319"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(170..499)
                     /locus_tag="JN001_004204"
     CDS             complement(170..499)
                     /locus_tag="JN001_004204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310836.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF496 family protein"
                     /protein_id="HAY9055195.1"
                     /translation="METTKPSFQDVLEFVRLFRRKNKLQREIQDVEKKIRDNQKRVLL
                     LDNLSDYIKPGMSVEAIQGIIASMKGDYEDRVDDYIIKNAELSKERRDISKKLKAMGE
                     MKNGEAK"
     gene            complement(671..>1329)
                     /locus_tag="JN001_004205"
     CDS             complement(671..>1329)
                     /locus_tag="JN001_004205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HAY9055196.1"
                     /translation="TGEIDTALWRSGDVLLGSLLAMLFTGIWPQRAFIHWRIQLAKSL
                     TEYNRVYQSAFSPNLLERPRLESHLQKLLTDAVKMRGLIAPASKETRIPKSIYEGIQT
                     INRNLVCMLELQINAYWATRPSHFVLLNAQKLRDTQHMMQQILLSLVHALYEGNPQPV
                     FANTEKLNDAVEELRQLLNNHHDLKVVETPIYGYVWLNMETAHQLELLSNLICRALRK
                     "
BASE COUNT          326 a          311 c          312 g          380 t
ORIGIN      
        1 agtgcggtta ataacaatgg agttacagaa ctttttgcct tgctgcatac agaagatgtc
       61 tgtcgctaat ttcggtaagt tatcagatgg gaatgatgac ggtgatacac agaaaagaat
      121 caatgagcaa tgagggttgc caggcaaccc tcattgaata aaacaggaat tacttcgctt
      181 cgccgttttt catttcgccc atagctttca gctttttgga gatatcgcgg cgttctttgg
      241 agagctcggc atttttgatg atgtaatcgt caacgcgatc ttcatagtca cctttcatgc
      301 tggcgatgat gccctggatt gcttcaacgc tcatccccgg cttgatgtaa tcgctcaggt
      361 tgtccagcag caggacgcgc ttctggttgt cacggatctt tttctcaacg tcctgaattt
      421 cacgttgcag tttgttctta cgacggaaca gacgaacaaa ttccagtacg tcctggaatg
      481 aaggcttggt agtttccatt tttatacccc tgataatgtg agagtcggat tcgtttaagc
      541 aaccgctatc cgttagagcc aacattactc atagctgccg cagatgacaa tgcttttatc
      601 ccttttcact atcataccct ttatccttgc tgaatcgaag cagcagcaag atgattctgt
      661 agttcaggaa ttatttgcgc aaggcccggc aaatcagatt cgatagcaac tcaagctgat
      721 gtgccgtttc catgttcagc cacacataac catagattgg tgtttccaca accttcaggt
      781 catggtggtt attgagcaac tgacgcagct cttccactgc atcgttcaat ttttccgtat
      841 tggcaaaaac cggctgcgga ttaccttcgt acaacgcatg aacaaggctc agcagtattt
      901 gctgcatcat gtgctgggta tcacgaagtt tttgcgcgtt caataacacg aaatggctgg
      961 ggcgcgtggc ccagtacgca ttgatttgca actccagcat acaaaccaga ttgcggttaa
     1021 tggtctggat accttcatat atcgattttg gaatacgggt ttctttgctg gcgggcgcaa
     1081 tcagcccacg cattttcacg gcatcggtca ggagtttttg tagatggctt tccagacgtg
     1141 ggcgttcgag taagttcggt gagaatgcag attgatagac ccgattatac tcggtcagac
     1201 ttttcgccag ttgaatgcgc cagtggatga acgcccgttg tggccagata ccggtaaaca
     1261 acattgccag taaagagccg aggagcacat cgccgcttcg ccataacgcc gtatcaattt
     1321 cacctgtcg
//
LOCUS       DADMJE010000315         1315 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.320, whole genome shotgun sequence.
ACCESSION   DADMJE010000315 DADMJE010000000
VERSION     DADMJE010000315.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1315)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1315)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1315
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.320"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..744
                     /locus_tag="JN001_004206"
     CDS             <1..744
                     /locus_tag="JN001_004206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016235166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS element protein"
                     /protein_id="HAY9055197.1"
                     /translation="YTPARKIHLYHCDHRGLPLALISTEGATEWCAEYDEWGNLLNEE
                     NPHQLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQYPLNP
                     ISEIDPQGLNPLILGVVALMSCGLFSSGGVIQSGQQRRDQYGRKVNPEADKLTDEHKS
                     GVNPGGNCSPQNLSDLQNEKNRLCNQSRACAPQMLRKEILRRYEINLACASVRKQINN
                     QCFGGGDKAHMEEENKAYKTAADCSGLIK"
     gene            741..1244
                     /locus_tag="JN001_004207"
     CDS             741..1244
                     /locus_tag="JN001_004207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000720080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055198.1"
                     /translation="MKKIIFSNESAVYDELMIHFPCQPLPHISNDIIGLDELDVVYNF
                     FQKKQWNEIANNLKIKDDSYALELGITFLPEKVFCYYIPLYIYVSLFNKNDFWVFESD
                     FIQQYLCPEYRDYDDFLNFVFNFSDIQLSIIAQFMSYESDAGFFYASKACMDFWEDYS
                     PLLHKKI"
BASE COUNT          414 a          228 c          292 g          381 t
ORIGIN      
        1 tacacgccgg cgcgaaaaat ccacctgtac cactgcgacc atcgcggcct gccgctggcg
       61 cttatcagca cggaaggggc aacagaatgg tgcgcagaat acgatgagtg gggcaacctg
      121 ctgaatgaag agaacccgca ccagctgcag cagcttatcc gtttgccggg gcagcagtat
      181 gatgaggagt ccggcctgta ttacaaccgc caccgctatt atgacccgct gcaggggcga
      241 tatatcactc aggacccaat tgggctgaag gggggatgga atttttatca gtatccgttg
      301 aatccgatct cagagataga cccacaaggg ttaaatccgt taattcttgg tgttgtagca
      361 ctgatgagtt gcggtttgtt ttcatcaggt ggtgttatcc aaagtgggca acaacgcaga
      421 gatcaatatg gacgtaaagt taatccagaa gccgacaaat taacagatga acataagtca
      481 ggtgtaaatc ctggaggtaa ctgtagtccc cagaacctga gtgacttaca aaatgaaaaa
      541 aacagattat gtaaccagtc tagagcttgc gctcctcaga tgctgagaaa agaaatattg
      601 agacggtacg agataaattt ggcgtgcgct tcggtcagaa agcagattaa taatcagtgc
      661 tttggtggtg gagataaggc ccatatggaa gaagagaata aagcatataa aacagcagct
      721 gattgcagtg gcttaataaa atgaaaaaaa taattttctc taacgagagt gcagtctatg
      781 atgaacttat gattcatttt ccatgccagc cattacctca tatttcaaat gatattatag
      841 ggctggatga actggatgtt gtatataatt ttttccaaaa gaaacaatgg aatgaaatag
      901 ccaataattt aaaaataaag gatgactctt atgctttaga gttaggaatt acattcctcc
      961 ctgagaaagt attctgctat tacatccctc tgtatattta tgtctcgttg tttaataaga
     1021 atgatttttg ggtttttgaa tccgatttta ttcaacaata tttatgtcct gagtatcggg
     1081 attacgatga ttttttgaat tttgttttta atttttcaga tatacaacta tctattattg
     1141 cacagtttat gtcttatgaa tcagacgctg gattctttta tgcaagtaaa gcttgtatgg
     1201 atttttggga agattattca cctctattac ataagaaaat ttaatcgtaa aaggtataaa
     1261 tggtttaata aaaaacttgt ctactcgttg gagtagatga aaaataagat gacgt
//
LOCUS       DADMJE010000316         1302 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.321, whole genome shotgun sequence.
ACCESSION   DADMJE010000316 DADMJE010000000
VERSION     DADMJE010000316.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1302)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1302)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1302
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.321"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..908
                     /gene="pocR"
                     /locus_tag="JN001_004208"
     CDS             <1..908
                     /gene="pocR"
                     /locus_tag="JN001_004208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_460981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="regulatory protein PocR"
                     /protein_id="HAY9055199.1"
                     /translation="AATLNSELINKIAQDFAQATSLAVVVVNIHGDEISELFNFTPFC
                     QMMRQHPQLSTRCRMSDRCGGLEASKSDQPCIYRCHAGLTDFSIPLVIAGHLVGFVLC
                     GQVRLRNDYVDLVDILNVDDCWQADPELLNEFRKVPEMDYSRVMASADLLKLIVENCL
                     KKQLNFVVIKENKSQSDSVRQTRAPSPHDNKMKKALRYIDAHLSDDLRLEDVASHVYL
                     SPYYFSKLFKKYHGIGFNAWVNQQRMASARELLCHSDWSIASIARNLGFSQTSYFCKV
                     FRQTYQVTPQVYRQQVSENAAMETV"
     regulatory      997..1172
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
BASE COUNT          353 a          277 c          324 g          348 t
ORIGIN      
        1 ctgcggcgac acttaattca gaactcatta ataaaatcgc gcaggatttt gcgcaggcga
       61 ccagccttgc ggttgtcgtg gtcaatattc acggcgatga aatttccgag ctgtttaact
      121 tcactccatt ttgtcagatg atgcggcaac accctcagct aagcactcga tgtcgcatga
      181 gcgatcgttg tgggggcctg gaagcctcta aatccgatca gccttgtatt tatcgctgtc
      241 atgccggatt aaccgatttc tctattccac tggtaatcgc cgggcattta gtcggttttg
      301 tattgtgcgg gcaagttcgt ctgcgtaatg attatgtcga tttggtcgat attctgaatg
      361 tcgatgattg ctggcaggca gatcccgaat tacttaatga atttcgcaaa gttcctgaga
      421 tggattactc aagagttatg gcctctgctg atttgttgaa gttgattgta gaaaattgcc
      481 tcaaaaaaca actcaatttt gtggttatta aagagaacaa atctcagtca gattcggtgc
      541 gccagactcg tgcgcctagt ccccacgaca ataaaatgaa aaaagcttta cgctatattg
      601 atgcgcattt atcagacgat ttgcgtctgg aagatgtcgc ctcgcacgtt tatctaagcc
      661 cttattattt cagtaagtta ttcaagaaat accatggaat cgggtttaat gcgtgggtaa
      721 accaacaacg gatggccagc gcgcgtgagt tactgtgcca tagtgactgg agcatcgcca
      781 gcattgcgcg taatttaggt ttttcgcaaa ccagttattt ttgcaaagtt ttccgtcaga
      841 cttatcaggt tacgccgcag gtgtatcgac agcaagtgag tgaaaatgcg gcgatggaaa
      901 cggtatagag taaatgctaa aaaaagggaa ggtttaaata aacgctggaa tgaataatta
      961 acgttattta cgtgttatgg gaaaagtaaa atcagctcat aacatacgct gacaggtgtg
     1021 gcacatttgt gcctgggaag agagtgaaaa tccctcgcag cccccgctgc tgtaatgctg
     1081 acaaacccga aaatgccact gatcgcgaga ttgggaaggt cgggagagga tgacgctaag
     1141 ccagaagacc agccagtcag tcaataccaa caacttcggt gggaagtggg ttgcccggaa
     1201 gcgtccggta gagtacaggc gcgtctttat acccctacca ccctgaaagg atcagggtat
     1261 ggcggcatca tttagttctt tcatcgcagt gccgacaggc ac
//
LOCUS       DADMJE010000317         1263 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.322, whole genome shotgun sequence.
ACCESSION   DADMJE010000317 DADMJE010000000
VERSION     DADMJE010000317.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.322"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..77)
                     /locus_tag="JN001_004209"
     CDS             complement(<1..77)
                     /locus_tag="JN001_004209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase"
                     /protein_id="HAY9055200.1"
                     /translation="MSKVGINGFGRIGRLVLRRLLEVKS"
     gene            266..796
                     /gene="cybB"
                     /locus_tag="JN001_004210"
     CDS             266..796
                     /gene="cybB"
                     /locus_tag="JN001_004210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415935.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b561"
                     /protein_id="HAY9055201.1"
                     /translation="MENKYSRLQISIHWLVFLLVIAAYCAMEFRGFFPRSDRPLINMI
                     HVSCGISILVLMVVRLLLRLKYPTPPIIPKPKPMMTGLAHLGHLVIYLLFIALPVIGL
                     VMMYNRGNPWFAFGLTMPYASEANFERVDSLKSWHETLANLGYFVIGLHAAAALAHHY
                     FWKDNTLLRMMPRKRS"
     gene            1041..1205
                     /locus_tag="JN001_004211"
     CDS             1041..1205
                     /locus_tag="JN001_004211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055202.1"
                     /translation="MKKLALILFMGTLVSFYADAGRKPCSGSKGGISHCTAGGKFVCN
                     DGSISASKKW"
BASE COUNT          337 a          267 c          288 g          371 t
ORIGIN      
        1 ttgcttttga cttcaagtaa tcgacgcaac accagtcgac cgatacgacc aaaaccgtta
       61 ataccaacct tactcatggt tttctcctgt caggaacgtt cggatgaaaa ttgatccttt
      121 ccaggcttag cccaggattg tgggatgggc aatctccatt cttacagtga aacgtaacgt
      181 actgaaaacg ggtgaacaat atttaatgaa attttgagaa aagcccgtta tgttaacgga
      241 aaattatgtt aaagcaggaa atgttatgga aaataaatac tcaaggttac aaatcagcat
      301 tcactggctg gtctttttgc tggttatcgc agcgtattgc gcaatggagt ttcggggttt
      361 cttcccacgt agcgatcggc cactcatcaa catgattcat gtttcctgcg gcatctcaat
      421 tctcgtgctg atggtcgttc gtcttttgtt aaggctgaaa tacccaaccc cgccgattat
      481 acctaagcca aaaccgatga tgacgggact ggcgcatttg ggacatttgg tgatttatct
      541 cctgtttatt gcgctgccag tgattggttt ggtgatgatg tataaccggg gcaacccgtg
      601 gtttgcgttt ggtttgacga tgccttacgc ttcagaggcc aatttcgaac gggttgatag
      661 cttaaagtcg tggcatgaaa cgctggcgaa tctgggatat tttgtcatcg ggttgcacgc
      721 tgcggctgca ctggcacacc actatttctg gaaggacaac acacttctac gcatgatgcc
      781 gcgtaaacgt tcctgaagga tatttaaaga aaacgcctgt actaaaaccg acccgtggta
      841 caggcgaaga atacgggtct acatcggaag cgcctattat atttatttgt atgacaaata
      901 aaaccataat ccttgcccat acgtccatct ggcttatttt taatcaattc acccgatctt
      961 tgatctcatc aacggtatca aaataaacca gcgtataacg ttcaaatcga acataagatt
     1021 cgataaacca tggaggttat atgaaaaaac tggcacttat tttgtttatg ggaacgcttg
     1081 tttcctttta tgccgatgcc gggcgcaaac cctgttctgg ttcgaaaggg gggatctcac
     1141 actgtacggc aggcggcaaa tttgtctgta atgatggttc tattagtgcc tcgaaaaaat
     1201 ggtaatgctg ccaacttact gatttagtgt atgatggtga ttttaaggtg cttgcgtggc
     1261 ttc
//
LOCUS       DADMJE010000318         1261 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.323, whole genome shotgun sequence.
ACCESSION   DADMJE010000318 DADMJE010000000
VERSION     DADMJE010000318.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1261)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1261)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1261
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.323"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..1174)
                     /locus_tag="JN001_004212"
     CDS             complement(<1..1174)
                     /locus_tag="JN001_004212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000232707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9055203.1"
                     /translation="MVGFGNKYIAAQFGISPGLAATVNASVLIAALIGGLLANRVINR
                     FGQKRAFIIGMGLCTIGAAAVAIAPSIWWVLVCRVIMGFGLGIDFPLATNAVAELRGS
                     TSKKTGTSVNLWQMAWYVSTTVVYLVLLPLLLSGIAEEQLWRYGIFIGAIFAVIFMIL
                     RYFFIGESAMWAARVGRYQEACDILGKRYGVQARVAASGTTEAKFSEKAENKYSGGYG
                     ILFNDRYRKRTILGCVVATMQAWQYNAVGVYLPLTLAGIISGGLTGALTGSAVVNALC
                     GVTGGMIGSFILQRLGTRRQSMYGFAVVTLALLSLGALATTNPWLSLGLLGSIIFFHS
                     AGPGGLGMTIATLSYLPAIRPTGVGFARAIMRTGAIAGLIFWPMLWGALKTEAFYWL"
BASE COUNT          372 a          355 c          280 g          254 t
ORIGIN      
        1 ccaaccagta aaacgcttca gttttcaacg caccccacag catcggccag aaaatgagtc
       61 ctgcaattgc ccctgtgcgc ataatagcgc gggcaaatcc gaccccagta gggcgaatag
      121 cgggaagata agagagtgtg gcaatggtca tgcccagccc accaggaccc gctgaatgga
      181 agaaaataat tgatcccaat aaccctaaag acagccaggg attagtcgtt gccagtgcgc
      241 ctaacgacag caatgctaag gtcacaacag caaatccata catcgactgt cggcgagtac
      301 ccagtcgttg gagaataaac gagccgatca tcccgcctgt caccccacaa agggcattca
      361 cgacggcaga accggtcaac gcgccagtaa gcccgccact tattattccc gccaacgtaa
      421 gaggaagata aacacctacg gcgttatatt gccacgcctg catggttgcc acgacacagc
      481 caagaatggt gcgtttgcgg taacgatcat taaataagat gccatatcca ccactgtatt
      541 tattctctgc tttttccgag aatttcgctt ctgttgtacc cgatgccgca acgcgagcct
      601 gaacaccata acgttttccc agaatgtcgc acgcttcctg gtaacgcccg acgcgtgcgg
      661 cccacattgc ggattcacca ataaagaagt aacgcaaaat catgaagatg actgcaaaaa
      721 tagctccgat gaatattccg taacgccaca attgttcttc agcgataccc gacagaagca
      781 gcggcaaaag taccaaataa acaacggttg tcgaaacata ccaggccatt tgccagaggt
      841 tgaccgacgt tccggttttc ttcgacgttg aaccacgaag ctctgccacg gcattggttg
      901 ccaaagggaa gtcgatgcct aaaccaaagc ccatgatgac gcggcacacc agcacccacc
      961 agatactggg agcaatagct accgctgcag caccgatggt gcacagcccc atgccaataa
     1021 taaatgcccg cttttgccca aagcggttta ttactcggtt cgctaataaa ccgccaatta
     1081 acgcggcgat taatactgat gcattgacgg ttgcagcaag acccggcgaa atgccgaatt
     1141 gagcggcaat gtatttatta ccaaacccca ccatcgccgc ctagtaggca tcaatcaata
     1201 tgccgcccaa agcaataaaa ataacgccga tactggtgtt gattgcagag ttcttattaa
     1261 c
//
LOCUS       DADMJE010000319         1242 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.324, whole genome shotgun sequence.
ACCESSION   DADMJE010000319 DADMJE010000000
VERSION     DADMJE010000319.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1242)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1242)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1242
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.324"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            220..1167
                     /locus_tag="JN001_004213"
     CDS             220..1167
                     /locus_tag="JN001_004213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001361319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HAY9055204.1"
                     /translation="MKNVLVTVPSFSARCVSASKLLRENNFNLIIKNNVEHLLKSEST
                     ALRESICAVIAGKDCYQADTLSLLPGVKIISRFGTGIDNIDLRAAQQSGIVVNNAVGI
                     NSNAVAEFIIGLIFASMRNIPGSYHAMQNGYWGESHGYELQGKRIGMVGYGNIGKTLA
                     KRLSGFDVELLAYDKQPDYQVADKVGVQFVSIEDIFMQSHVIIVLLPFSPELENFISH
                     KYLSMMRNGALIINAARGKLLDEGALLQVIEERNVFAALDVFSSEPLAQFSPLLHAKN
                     IITTPHIAAATVESYQQTGTHVAQSIIDYFAGREIKNVL"
BASE COUNT          340 a          241 c          297 g          364 t
ORIGIN      
        1 aggtttagca ccgtcatgct cgtctactgt tgttctggtt gttggtgatg cggtggcgct
       61 tgcactctct gaattgaaaa aatttactcg tgctgatttc ggcttatatc atccaggagg
      121 tgcactcggc attaaagcaa attcataatt tcaaagtata aatacagtga ccggtcacgc
      181 catcttttgg ggtggcgttc attgaagtga gtgtcagcta tgaaaaatgt tctggtcacc
      241 gtccccagct tttcagcacg ctgtgtttcc gccagcaagt tgctaagaga gaataatttt
      301 aatcttatta ttaagaataa tgtggagcat ctgcttaaat cagaatccac tgcattacga
      361 gaatctattt gcgcggtcat cgccggaaaa gattgttatc aggcggacac gctatcattg
      421 ctgcctggtg tgaaaataat atcgagattc gggacgggga tagataatat tgatcttcgt
      481 gcagcacaac aatccggtat tgtagtcaat aatgcggttg ggattaattc aaatgctgtc
      541 gcggaattta tcattggact tatcttcgcg agcatgagaa atattcccgg cagctatcat
      601 gcgatgcaaa atggctactg gggtgagtcg catggctatg aattacaagg caaacggatt
      661 ggcatggttg gctacggcaa tataggtaaa accctggcaa aaaggttatc cggttttgat
      721 gttgagcttt tagcttatga caaacaaccc gattatcagg ttgctgacaa agttggagtt
      781 cagtttgtat caattgaaga tatctttatg cagtcgcatg tcatcattgt tcttttgcct
      841 ttttctcctg agctggagaa cttcattagt cataaatatt tgtcgatgat gcgcaatggt
      901 gctctaatca tcaatgccgc aaggggaaag ttgctggatg agggcgcttt actacaggtg
      961 attgaagaac gaaatgtgtt tgcggcgctg gatgtgttta gctctgaacc gttggcgcaa
     1021 tttagcccac tgctacatgc caaaaatatc attacaacgc cgcatattgc ggccgccacc
     1081 gttgagtcat accagcaaac cggtacacac gttgcccagt cgataattga ttacttcgca
     1141 ggaagggaga taaaaaacgt gttgtgagtt cagcgaacga agtttttaaa tacaaaaaaa
     1201 ccgcaatttg tggaacacat tgcggtttat cagcattcta ag
//
LOCUS       DADMJE010000320         1210 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.325, whole genome shotgun sequence.
ACCESSION   DADMJE010000320 DADMJE010000000
VERSION     DADMJE010000320.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1210)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1210)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1210
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.325"
                     /strain="H111840194"
                     /db_xref="taxon:621"
BASE COUNT          370 a          208 c          237 g          395 t
ORIGIN      
        1 ttcaaaataa acgtttaata gggacaatca ccatttggat tgtccgctga ggaggcgaac
       61 gttttcctag acagctttat catgtcagcc cacattgttg gcgctgacaa tactaaggac
      121 aaacgatggg gaagtagctt tttagcgtta ttttcgggag taaaaaacat ggtatctttc
      181 cgtatgtcag ttgtatcttg ctggtattcg tagtcgtgat aaggcataca acgatattta
      241 tcttcacgtt agtgaagaat aagttgtttt gtgatctatg ttaatctggg attacaatcc
      301 gggcttgata catcgcatca cgacttttat tctcttcaga atagaatatg ttactccccg
      361 ttttacaggc tcaggatttg aattacaaat tatactttta agtgaacaat aactaggggt
      421 atttcttatt tcctgaaacc aggcttggcc catttcggga tgagtttgaa aaaactcttg
      481 acgcatacga tagtgatgaa ataaacgaaa caaattacgt caacaaactc aggcgtcttg
      541 cctgacatgc tcctgacatc attgatattc acgctcatct ggcatatgca tttgcgctct
      601 ttatgctgca attctggcga atgttcattt acagcgtcat caggatgccg ttatactcat
      661 tgataaaata ctaacatata accctgagaa taatcagggg acacgctggt tactggggac
      721 ggaattgtta cgtgctggca agcatgacag ggctctgtac gtattgacag gacatgtcaa
      781 tgaatttccc ccctactggt acgagcttgc tcttttacat tttatgaatg aggcatatat
      841 taatgctgca acggcatttc gatatggatt tttaacaagc atatattgtt gaaatgcttt
      901 gttagaatct ttatccattc cctggggctg tatagtatga ttttttaggt atttctgaat
      961 acagccaaat attattgcaa aatattctct aaattattag ttaaatatcc ataagcatta
     1021 ttgcctggga actggacata taattactct tctgtgctaa aggaacgttc tgaaatgttt
     1081 aagtatgcag agatgttgat ggcggaagaa gataataaag tatgtgaact tatttttaaa
     1141 caacaagata atttgatttt aaaaataaat gatagatttc ccagaataat tataaagaaa
     1201 taccgaacat
//
LOCUS       DADMJE010000321         1206 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.326, whole genome shotgun sequence.
ACCESSION   DADMJE010000321 DADMJE010000000
VERSION     DADMJE010000321.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.326"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(48..1190)
                     /locus_tag="JN001_004214"
     CDS             complement(48..1190)
                     /locus_tag="JN001_004214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001488780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate porin"
                     /protein_id="HAY9055205.1"
                     /translation="MSGWFDLTLNQRVYNQDGKTANAVVTYDGNVGEQYNDAWFGDSA
                     NENIMQFSDIYLTTRGFLPFAPEADFWVGKHKLPQYEIQMLDWKTLTTDVAAGVGIEN
                     WALGVGLFDMSLSRDDVDVYSRDFSRTSQMNTNSVDVRYRNIPLWDDATLSLMAKYSA
                     PNKTDQQQDNENDNSYFEMKDSWMLTSVLRQNLQRDTFNEFTLQVANNSYASSFASFS
                     DASNTMAHGRYYYGDHTNGIAWRLISQGEMYLTDNIIMANALVYSHGEDVYSYESGAH
                     SDFDSIRTVIRPAWIWNTWNQTGLELGWFKQQNKTQQGVTLNESAYKTTLWHALKVGE
                     SILGSRPEIRFYGTYINILDNELSNFKFNENSKDEFMAGIQAEVWW"
BASE COUNT          345 a          293 c          221 g          347 t
ORIGIN      
        1 aaaccttttt taaatcctga catacacaac tccttaacta aaatagatta ccaccagact
       61 tccgcctgga tgccggccat aaactcgtct ttgctgttct cattaaactt aaaattcgat
      121 aattcgttat ccagaatatt gatatacgtt ccatagaagc gaatttctgg tcgtgaacct
      181 aaaatgcttt cacccacttt caatgcatgc cagagtgtcg ttttataagc cgattcattt
      241 agtgttacac cctgctgagt tttgttctgt tgcttaaacc agcctaattc aagccccgtc
      301 tgattccatg tattccagat ccaggccggt cttattacag tgcgaatact gtcaaaatca
      361 ctatgagcac cactttcata actataaaca tcttcgccgt gagaatagac aagcgcgtta
      421 gccataataa tattgtcagt aagatacatc tcgccctgag agattaaacg ccaggcgatc
      481 ccattggtat gatcaccata gtaatagcga ccatgcgcca tcgtattact ggcatctgag
      541 aaactggcaa aactgctggc ataggaatta ttggcaacct gtaacgtaaa ttcattaaac
      601 gtatcgcgtt gcaggttttg ccgtaaaaca gaagtcagca tccagctatc tttcatttca
      661 aaataactgt tgtcattttc gttatcttgt tgttgatccg ttttattagg tgcggaatat
      721 ttagccatta atgataatgt cgcatcatcc cataacggga tattgcgata acgaacatcc
      781 acagaattgg tattcatctg gctggtacgc gaaaaatcac gagagtaaac atcgacatca
      841 tcacggctta aggacatatc aaacagccct acaccaagtg cccagttttc aatccccaca
      901 cccgcggcga catccgtggt taaggttttc cagtccagca tctggatctc atattgcggg
      961 agtttatgtt tgccgaccca gaagtctgcc tctggtgcga agggtaaaaa acctcgcgtt
     1021 gtcaggtaaa tatcgctgaa ctgcatgata ttttcattgg cactgtcacc aaaccaggca
     1081 tcgttatact gctcacccac gttgccatca taggtaacga ccgcatttgc cgttttaccg
     1141 tcctgattat aaacacgctg atttaaggtc aggtcaaacc aaccgctcat ctcattacca
     1201 aaacgt
//
LOCUS       DADMJE010000322         1206 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.327, whole genome shotgun sequence.
ACCESSION   DADMJE010000322 DADMJE010000000
VERSION     DADMJE010000322.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1206)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1206)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1206
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.327"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..829)
                     /locus_tag="JN001_004215"
     CDS             complement(<1..829)
                     /locus_tag="JN001_004215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000935594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HAY9055206.1"
                     /translation="MLNVAIENQNGWNYSAPAPHKTGAGISTPKVTRAHNRAEAVFLC
                     VMHSHIQIMVRRAGQPQGWPGSRVTGSANPVRLTTHEISTSAGELINLSLEDVIMATT
                     LSHPDVTIENGRAVTTSISIAEFFGKQHHHVVQKIESFECSELFLTSNFSRVKFEHRG
                     NSYNAYQITKNGFVFLVMGFTGKKAATFKEAYIAEFDRMEAELRQNNTPPADKMIPGD
                     GRTLVVHFDKFGNVEFTETVPDGALVCTLETFRFYLEKQGWTLVNRGAIKNMTVEQLL
                     "
BASE COUNT          309 a          302 c          281 g          314 t
ORIGIN      
        1 aaagcaactg ctctacggtc atgtttttaa ttgcgccccg gtttacaaga gtccagccct
       61 gtttttccag ataaaaccgg aaagtctcca gggtacagac cagtgcgcca tcaggaacgg
      121 tttcggtgaa ttcgacattg ccgaatttgt cgaagtgaac aaccagagtg cgaccatcac
      181 ccggaatcat cttgtcagca ggtggggtgt tattctggcg cagttcggcc tccatgcggt
      241 cgaactcagc aatgtaggct tccttgaatg tggcggcttt tttgcccgtg aagcccatca
      301 ccaggaaaac gaagccgttt ttggtgattt ggtaggcgtt ataagaattg ccgcggtgtt
      361 cgaatttaac ccgcgaaaag ttgctggtta aaaatagttc agaacattcg aaggattcta
      421 ttttttgaac aacatggtga tgctgcttgc caaaaaactc agcaatcgaa atagaagtag
      481 tgacggcgcg accattttcg atggttacgt cagggtgaga aagggtagta gccataatga
      541 catcctcaag tgataagtta attaactcac cagcagaggt gctaatctca tgggtggtga
      601 gacgcacagg gttagcacta ccggtcactc gagaacccgg ccagccttgc ggctgccccg
      661 cacgcctcac cataatttga atgtggctgt gcattacgca taaaaaaacc gcttcagcgc
      721 ggttatgcgc tcgagtaact ttcggggtgc taatcccggc acccgtttta tgaggtgcag
      781 gtgcactata attccacccg ttctggtttt caatagctac attcaacatt ttctctttcc
      841 tttcatcacc gaagtgaatt ttgtgatgcg gtgcctagtg cctccaggtg acgttaacca
      901 gttaacaatt acagtcggct ttcccaccca aaccaataag gactaacatg acttttaact
      961 gtgccgcgtg cgcttagccg cattcaccgc atcacaaaat tcactttaaa aagggcggac
     1021 atcagccagc aattaaaccg atgccgccaa ctggtacttc acacagcaat gtcgttattt
     1081 acaaccggaa gcgcactccc accatttaaa tttcacagac aagaccgact ctttatgaat
     1141 accggaaatg cgccttcgtg ttgtgcccgg ttttatttca ccacctccgg gctttggtgg
     1201 cctcgg
//
LOCUS       DADMJE010000323         1199 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.328, whole genome shotgun sequence.
ACCESSION   DADMJE010000323 DADMJE010000000
VERSION     DADMJE010000323.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1199)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1199)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1199
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.328"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JN001_004216"
     CDS             complement(<1..755)
                     /gene="ipaH4.5"
                     /locus_tag="JN001_004216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase
                     IpaH4.5"
                     /protein_id="HAY9055207.1"
                     /translation="MKPINNHSFFRSLCGLSCISRLSVEEQCTRDYHRIWDDWAREGT
                     TTENRIQAVRLLKICLDTREPVLNLSLLKLRSLPPLPLHIRELNISNNELISLPENSP
                     LLTELHVNGNNLNILPTLPSQLIKLNISFNRNLSCLPSLPPYLQSLSARFNSLETLPE
                     LPSTLTILRIEGNRLTVLPELPHRLQELFVSGNRLQELPEFPQRLKYLKVGENQLRRL
                     SRLPQELLTLDVSNNLLTSLPENIITLPICTNV"
BASE COUNT          341 a          214 c          259 g          385 t
ORIGIN      
        1 ttaacattcg tacaaatggg caatgtgatt atattttcgg gtaatgaagt tagtaggtta
       61 ttggaaacat ccagtgtcaa tagttcttgc ggtaatctgg ataatctgcg tagttgattt
      121 tcacctacct tcaaatattt taagcgctga ggaaattctg gtagttcctg tagtctgttg
      181 ccggaaacaa agagttcttg tagtctatga ggcaattcag gcaagacagt aaggcgatta
      241 ccttcaatac gtaatattgt tagcgttgat ggaagctctg gtaacgtctc cagactatta
      301 aaacgtgccg agagtgattg taaatatggt ggtaatgatg gcagacatga caaatttcga
      361 ttgaatgaaa tattaagctt aatcagttga gatggaagtg tcgggagtat attcaagttg
      421 ttaccattta catgaagttc tgtcaaaagc ggagaatttt caggtaggga gattaactca
      481 ttgttggaaa tattaagttc acgtatatgc aaagggagtg gtggtaaaga acgtagtttc
      541 agtaagctta aattgagaac aggctcccgg gtatccagac atattttcaa taatcgaacc
      601 gcctggatgc gattttctgt tgttgttcct tccctagccc agtcatccca gatgcggtgg
      661 taatctctgg tacactgttc ttctaccgat aaacgagata tacatgataa gccacaaagg
      721 gaacgaaaaa aagaatgatt gttgatcggt ttcatttatt aacccctcac tattcatatc
      781 ttggtctatt aatgcaaata aaacgagaaa gtctttaaaa aaacaatcct agagctttat
      841 cggcgttttc attccagctg gaggaatatg ttcctgtctt tccagtaacc gtcgattgtt
      901 atatcagtct acccatgtta atgtgaccag ttctactttc atccagtttg gattgatctt
      961 tatcccctat attttcaaac aatttttatc atttaactca ttactgtctc gatattccca
     1021 tagcaaacga tctggttggt tagcccctca aaaaagtcag ttgcacgccg taaatccctg
     1081 ccggtattga gcgaggattt acgggttgtt gttaaggtcc gtaatcgggt cacagttttt
     1141 ccggagtcaa tccggtctgc ggtttatgct tatgcgacgt gattatgaat ggtgcagtc
//
LOCUS       DADMJE010000324         1198 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.329, whole genome shotgun sequence.
ACCESSION   DADMJE010000324 DADMJE010000000
VERSION     DADMJE010000324.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1198)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1198)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1198
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.329"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            59..1069
                     /locus_tag="JN001_004217"
     CDS             59..1069
                     /locus_tag="JN001_004217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001494590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HAY9055208.1"
                     /translation="MDKITQVLFSDIGKVTTQYVEVPHQELKPHEVRIAPVFYGICGS
                     DLHVLKGGHPFAKPPVVPGHEIAARVTEVGSDVKNVQPGDHVVVDPIMACMECRACKA
                     GRFNLCEPPQVASFRAPGFARSQHIVPARNCHVAPASLPLKVLAFAEPAACARHCVNR
                     MPKASLESVLVIGAGTIGLSIVQALRIMGAGKITVIEPDAAKRALALKLGAAEVWAPG
                     ELAADVRFTGAIDVVAAQATLNDACTRVYAGGTVVCMGVPSGPREIPLPMMQRFERDL
                     LNSGMYIPEDFDAVIEWLADGRFDTSELVTDLFAIEDAAAAFERAQQNDSIKVMLQFA
                     PE"
BASE COUNT          283 a          294 c          324 g          297 t
ORIGIN      
        1 tcgatgaagg tatcgcgcaa cgctaatccc ctatggatat cgattctgga gaataacaat
       61 ggataaaatt acccaggttt tattttcaga tattgggaaa gtcaccactc aatatgttga
      121 agtaccacac caggaactta aaccgcacga agtgcggatt gcgcctgtgt tctatgggat
      181 atgcggttcg gatctgcatg ttctgaaagg cggtcatccg tttgccaaac cacctgtcgt
      241 ccccggtcat gaaattgcag cgcgcgttac ggaagttggc agcgacgtta aaaatgtaca
      301 gccgggcgat catgttgtgg tcgatcccat catggcttgc atggaatgcc gagcctgcaa
      361 agcaggacgt tttaatcttt gtgaaccacc gcaggttgct agttttcgcg caccgggctt
      421 tgctcgctca caacacattg ttcctgcgcg taattgccat gtcgcaccag cctctttacc
      481 gctaaaagtg ttggcctttg ccgaaccggc ggcttgtgcc cgtcactgcg ttaaccgaat
      541 gccgaaagct tctctggaaa gcgtactggt aattggtgcc ggaacgatag gcttatccat
      601 cgtgcaggca ctgcgcatta tgggggcagg taagattacc gtgattgaac ctgacgctgc
      661 caaacgcgcg ctggcgttaa agctgggcgc agcagaagtt tgggcaccag gtgagctggc
      721 cgcagatgtg cgatttacgg gggcgattga tgtcgttgca gcgcaggcca cgcttaacga
      781 tgcatgtacc cgtgtatatg ccggaggcac cgtcgtgtgc atgggcgtac caagtgggcc
      841 gcgtgaaata ccattaccga tgatgcaacg tttcgagcgt gacttgctca actctggcat
      901 gtacatccct gaagatttcg atgctgttat cgaatggctg gcggatgggc ggtttgatac
      961 cagtgaactg gttaccgatt tatttgccat tgaggatgca gcggcggcat ttgaacgcgc
     1021 gcagcaaaat gactccataa aggtcatgct gcaatttgcg ccggaatgat tttctaaatc
     1081 tctgtctggc gctgcgtcac gtcagcgcca ccctacaaca attaaaaagg acactgcgat
     1141 gagtcaaatc accagtcctg caacttattc aattagtcgg ccacaggacg taattgat
//
LOCUS       DADMJE010000325         1161 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.330, whole genome shotgun sequence.
ACCESSION   DADMJE010000325 DADMJE010000000
VERSION     DADMJE010000325.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1161)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1161)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1161
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.330"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>1161
                     /locus_tag="JN001_004218"
     CDS             <1..>1161
                     /locus_tag="JN001_004218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001033208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055209.1"
                     /translation="GMLSSFGALANAGNDNGQGVDYGSGSAGDGWVAIGKGAKANTFM
                     NTSGSSTAVGYDAIAEGQYSSAIGSKTHAIGGASMAFGVSAISEGDRSIALGASSYSL
                     GQYSMALGRYSKALGKLSIAMGDSSKAEGANAIALGNATKATEIMSIALGDTANASKA
                     YSMALGASSVASEENAIALGRSSVASGTDSLAFGRQSLASAANAIAIGAETEAAENAT
                     AIGNNAKAKGTNSMAMGFGSLADKVNTIALGNGSQALADNAIAIGQGNKADGVDAIAL
                     GNGSQSRGLNTIALGTASNATGDKSLALGSNSSANGINSVALGADSIADLDNTVSVGN
                     SSLKRKIVNVKNGAIKSDSYDAINGSQLYAISDSVAKRLGGGAAVDVDDGTV"
BASE COUNT          310 a          243 c          334 g          274 t
ORIGIN      
        1 gtggaatgtt gtcgtcgttt ggggcattgg cgaatgccgg gaatgacaac ggtcagggtg
       61 ttgattacgg tagtggatca gctggcgacg gctgggttgc tataggcaaa ggggcgaaag
      121 caaatacttt tatgaacacc agtggttcca gtactgctgt gggttatgac gctatagctg
      181 aaggccaata tagctctgcc atcgggtcaa aaacccatgc gattggtggt gcatcaatgg
      241 cctttggggt tagtgcaata tcagaaggcg atagaagtat agcactgggt gcctcttcgt
      301 attcattggg ccaatactca atggccctcg gccgttattc aaaagcattg ggtaaattgt
      361 ctattgctat gggggactct tccaaagcgg aaggagcaaa cgccattgcc ctgggaaatg
      421 ccactaaagc tactgagatt atgagtattg ctcttggcga caccgccaat gcgtcaaaag
      481 cgtattcaat ggcgctggga gcaagtagcg tcgcatctga agaaaacgca attgccctgg
      541 ggcgtagcag tgtagctagc ggtactgaca gcctcgcatt tggcagacaa tcacttgcca
      601 gcgcagcgaa cgctattgcg ataggtgctg agaccgaagc cgctgaaaat gcaactgcta
      661 ttggcaataa tgcgaaggca aaagggacta atagcatggc aatggggttc ggaagccttg
      721 ccgataaagt caatactatc gcattaggaa atggcagcca ggctctggca gataatgcaa
      781 tcgccatagg ccagggcaac aaagctgatg gcgtggatgc catcgctctg ggtaatggta
      841 gccagtcgag aggcttaaac accattgcct taggcacagc cagtaatgca actggtgata
      901 agagtcttgc gcttggtagt aatagcagtg ccaacggtat taactctgtc gcgctgggcg
      961 cagattccat tgcggattta gacaataccg tctctgtcgg caatagttca ttaaaacgca
     1021 agatcgttaa tgtgaaaaat ggcgcgatca agtctgacag ttacgatgcc attaatggtt
     1081 cacagcttta tgccattagc gactcggtag caaaaaggct tggaggaggg gctgcagtag
     1141 atgttgatga cggtactgtt a
//
LOCUS       DADMJE010000326         1155 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.331, whole genome shotgun sequence.
ACCESSION   DADMJE010000326 DADMJE010000000
VERSION     DADMJE010000326.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1155)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1155)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1155
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.331"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..261)
                     /locus_tag="JN001_004219"
                     /pseudo
     CDS             complement(1..261)
                     /locus_tag="JN001_004219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611134.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(376..1014)
                     /locus_tag="JN001_004220"
     CDS             complement(376..1014)
                     /locus_tag="JN001_004220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055210.1"
                     /translation="MINGVSLQGTAGYEAHTEEGNVNVKKLLESLNSKSLGDMDKDSE
                     LAATLQKMINPSGGDGNCSGCALHACMAMLGYGVREAPVPNEISEYMTGFFHRHLEQI
                     DSEGIVSHPNETYSKFRERIAENILQNTSKGSVVMISIEQATHWIAGFNDGEKIMFLD
                     VQTGKGFNLYDPVEKSPDAFVDENSSVQVIHVSDQEFDHYANSSSWKSKRLC"
BASE COUNT          338 a          285 c          175 g          357 t
ORIGIN      
        1 caagcgctgt aactctttta tttgttttat agcggcagcc agttctgagg caggaacgac
       61 atcctctccg gcagcaacag cagtgagact tccttccaga tattattttt tccacttaag
      121 caacaggctg ggctgaatac catgcaaacg cgccacatgg gacaccgtca tgccaggctc
      181 cattgtctgc tgaataatgg caattttttc ctgaggagtt ttacgtttac gaagctccag
      241 ccccagcaaa gttccagtca tctcaaaatt agaactagtg ttagacatat atccaagcct
      301 atctcttatt ttaagataca tccactgtct ggcgtttcaa ggggccggct caaatctatg
      361 tacaggctct cagcatcagc aaagcctctt actcttccaa ctactactgt tagcatagtg
      421 atcaaattcc tgatcagata catgaattac ctgaaccgaa ctattttcat ctacaaatgc
      481 atctggcgat ttttctacag gatcataaag attaaatccc tttcctgttt gaacatccaa
      541 aaacataatt ttttcaccat cgttaaatcc agctatccaa tgagtggcct gttcaataga
      601 aatcattact acacttcctt ttgaagtgtt ttgtaaaata ttttctgcaa tacgctcacg
      661 aaatttacta taagtttcat taggatgtga cactatgcct tcactatcaa tttgctctaa
      721 atgcctatga aaaaatccgg tcatatactc tgatatttca ttaggtacgg gagcctctct
      781 tactccatac cctaacatag ccatacaagc atgaagcgca caccctgaac agttaccatc
      841 cccaccagac ggatttatca ttttctgtaa agtcgctgcc aattcagaat ctttatccat
      901 atcaccaaga cttttagagt ttaaagattc cagcaatttt ttaacattta catttccctc
      961 ctctgtatgt gcctcatatc cagcagttcc ctgtaacgac accccattaa tcatattgta
     1021 tcctgacagt atatatactc actatatttt cttcataaca aatatccctc tgatatgaca
     1081 acaaaaaacg gagccggatt cctgtttttg tgaactgcag ctattcgagt ctaaaaagtg
     1141 atccacttac cacca
//
LOCUS       DADMJE010000327         1140 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.332, whole genome shotgun sequence.
ACCESSION   DADMJE010000327 DADMJE010000000
VERSION     DADMJE010000327.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1140)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1140)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1140
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.332"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..184
                     /locus_tag="JN001_004221"
                     /pseudo
     CDS             1..184
                     /locus_tag="JN001_004221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611999.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
     gene            201..719
                     /locus_tag="JN001_004222"
                     /pseudo
     CDS             201..719
                     /locus_tag="JN001_004222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          332 a          264 c          251 g          293 t
ORIGIN      
        1 agataacgga attatcgtcg gtcgtgacag actggcacgt cttcgtaagg agctgaggct
       61 gcactgtaag cagaaacgca agttcagggc gaccacaaac tctgaccaca atctgccggt
      121 tacgccgaat ctgctgaatc agaactttac gcccacagca cctaatcagg tctgggtcgc
      181 agattcagtt gtccaggcct tccgaaatca accgactgaa ggcgctggtc gcgaaactgc
      241 agcgtatgca gttcggtaaa agctcagaaa aacttcgcgc aaaaaccgaa cggcggatac
      301 aggaagcaca ggagcgaatc agcgcacttc aggaggaaat ggcggaaaca ctgggtgagc
      361 aatatgaccc ggtactgcca tcttccctgc gccagtcttc agcccgtaaa ccgttaccag
      421 cctcacttcc ccgtgccccc cgggtcatcc ggccggaaga ggaatgctgt ccggcctgtg
      481 gtggtgaact cagtccactg ggatgtgatg tgtcagagca gctggagctt atcagcagcg
      541 cctttaaggt tatcgaaaaa caacgcccta aactggcctg tcgccggtgc gaccatatcg
      601 tgcaggcacc ggtgccttca aaacccattg cacgcagtta tgccggagcg gggcttctgg
      661 cccatgttgt taccggaaag tatgcagacc atctgccatt ataccgccaa agtgatctac
      721 tattccacac agctatttag ctctcttttt gttgagctcc catgattctt tcatttattg
      781 ttactaatta ttttatgtta tcatgatgtt agaacacgct ctgctctgtg tctctatttt
      841 atctatcata ttctgaggat taactacata acaaggcgca agatatatat ccaaaaacaa
      901 ataataccgt tgcaataatt cctttcagta aaggaggtgt gattaatttc aggggatttc
      961 agagtgaaaa ttgtacaaca tattgaaata tgttcatttc gttataatac acacaagaaa
     1021 atattaagtt agataatata ttctaaataa ccatagataa aaatgcacat aatggggaat
     1081 attttatgaa aatacctgaa gcagtaaatc atattaatgt tcagaataat attgatcttg
//
LOCUS       DADMJE010000328         1112 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.333, whole genome shotgun sequence.
ACCESSION   DADMJE010000328 DADMJE010000000
VERSION     DADMJE010000328.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.333"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            76..1020
                     /gene="lpxM"
                     /locus_tag="JN001_004223"
                     /gene_synonym="msbB"
     CDS             76..1020
                     /gene="lpxM"
                     /locus_tag="JN001_004223"
                     /gene_synonym="msbB"
                     /EC_number="2.3.1.243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858371.1"
                     /note="LpxM is lauroyl-Kdo(2)-lipid IV(A)
                     myristoyltransferase, an enzyme characterized in
                     Escherichia coli and involved in biosynthesis of the form
                     of lipid A found in that species and some closely related
                     species; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lauroyl-Kdo(2)-lipid IV(A) myristoyltransferase"
                     /protein_id="HAY9055211.1"
                     /translation="MKKYKSEFIPEFKKNYLSPVYWSTWFLLGMIAGISMFPPSFRDP
                     VLAKIGRWAGRLSKKARRRATINLSLCFPEKNDTEREIIVDKMFATALQSIVMMAELA
                     IRGPEKFQKRVFWKGLEILEEIRHNNRNVIFLVPHGWSVDIPAMLLAAQGKKMAAMFH
                     QQRNPVIDYVWNSVRRKFGGRLHAREDGIKPFIQSVRQGYWGYYLPDQDHGPEYSEFA
                     DFFATYKATLPIIGRLMNISQAMIIPLFPVYDEKKHLLTIEIRPPMDACIASADNKMI
                     ARQMNKTVEILVGPHPEQYVWVLKLLKTRKSNEADPYP"
BASE COUNT          342 a          209 c          251 g          310 t
ORIGIN      
        1 atttaaatta aggtttgatg tatcctctga ataaaacagt aatgataatt ttggtagagg
       61 cattcgcact aaataatgaa aaaatataaa tctgagttta ttcctgaatt taagaaaaat
      121 tacctttccc ctgtttactg gtctacatgg ttccttttgg gaatgattgc aggtatttca
      181 atgtttcccc cttcattcag agatcctgtc ttggcaaaaa tagggcgttg ggcgggcaga
      241 ttgagcaaaa aagctcgtcg cagggcgacg attaatttat cgctttgttt cccagaaaag
      301 aatgatacag aacgggaaat aattgtcgac aaaatgtttg ccacagcatt gcaatccata
      361 gtgatgatgg cagaactggc aattcgtggt ccggaaaagt tccagaaacg agtgttctgg
      421 aaaggcctcg aaattcttga ggaaattcga cacaataata gaaatgtgat ttttctggtt
      481 ccccatggct ggagcgtgga tattcctgca atgttgctgg cagctcaggg aaaaaaaatg
      541 gccgccatgt ttcatcagca acgaaatcca gtgattgatt atgtctggaa ttcagtacgg
      601 cgtaaattcg gggggcgctt acatgcccgg gaggatggga taaaaccatt tattcagtca
      661 gtacgccagg gatactgggg atattacctc ccagatcagg atcatggtcc tgaatacagt
      721 gaatttgctg atttttttgc gacctataaa gcgacattac caatcattgg acgtctgatg
      781 aacatcagtc aggctatgat tataccactt ttcccggttt atgatgaaaa aaaacatctc
      841 ctgactattg aaattcggcc accaatggat gcttgcattg ccagcgcgga caataaaatg
      901 attgcccgac aaatgaacaa aacagtggaa attttggtgg ggccacatcc ggaacagtat
      961 gtctgggttt taaaattgtt aaaaacacgc aaatcaaacg aagcggaccc gtacccttga
     1021 aattataaag tataagtatt tccactagtt gtttgtaagc gtacagcctg aaccgtctgg
     1081 tcagaatctg acgaattaga caaagtggtg tc
//
LOCUS       DADMJE010000329         1112 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.334, whole genome shotgun sequence.
ACCESSION   DADMJE010000329 DADMJE010000000
VERSION     DADMJE010000329.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1112)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1112)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1112
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.334"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..803)
                     /locus_tag="JN001_004224"
     CDS             complement(<1..803)
                     /locus_tag="JN001_004224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY9055212.1"
                     /translation="MLPTNNNHRLISNSFSTYSIDTSRAYENYLTHWTEWKNNRIQEE
                     QRDIAFQRLVSCLQNQETNLDLSELGLTTLPEIPPGIKSINISKNNLSLISPLPASLT
                     QLNVSYNRLIELPALPQGLKLLNASHNQLITLPTLPISLKELHVSNNQLCSLPVLPEL
                     LETLDVSCNGLAVLPPLPFSLQEISAIGNLLSELPPLPHNIHSIWAIDNMLTDIPYLP
                     ENLRNGYFDINQISHIPESILNLRNECSIDISDNPLSSHALQSLQRLTSS"
BASE COUNT          319 a          157 c          264 g          372 t
ORIGIN      
        1 gaagaggtta atctttgcag ggattgcaga gcatgggatg acaatgggtt atcactaata
       61 tctattgaac attcattcct cagattaaga atgctttccg ggatatgact tatctgattt
      121 atgtcaaaat aaccgttcct taaattttcc ggcaggtatg gaatatcggt taacatattg
      181 tcgattgccc atatggagtg aatgttgtga ggtagagggg ggagttcact aagaagattc
      241 cctattgcgc taatctcttg taaagaaaat ggtaaaggtg gtaaaactgc cagcccatta
      301 catgatacat ctaatgtttc cagtagttct ggtaaaacag gaagagaaca taattgatta
      361 tttgagacat gaagctcctt caaagatatg gggagtgtgg gtagtgtgat tagttgattg
      421 tgggacgcat tcaataattt aagtccttga ggcaaagcag gcagttcaat aagtctgtta
      481 tagctgacat taagctgtgt aagggacgca ggcaatgggg agattaagct taaattattt
      541 ttacttatat taattgattt aattcccggg gggatttcag gtaatgttgt caggcctaat
      601 tcagacaagt ctaggttcgt ctcttggttt tgtagacatg atactagtcg ctgaaaagcg
      661 atgtctcgtt gttcttcttg tatgcggtta tttttccatt cagtccaatg ggttagataa
      721 ttttcatatg cgcggctagt gtcgattgaa taagtggaga acgaatttga aattaatctg
      781 tgattgttat ttgtcgggag cataaatatc agggcgtatt ctttatgttg agaggtgttg
      841 gattcttttt tatctgcttt gcaatgttat tggttccctt cagcagtaga caggaacttc
      901 tggaggaggc ggatatatag tttgtgtaag catattaact ccatatgtta tatattgaag
      961 aacttctgct ttacactatc ctaaactgga tcggtttaat gtaaaaaaac gatacttttt
     1021 gggggagggg gcaatttttc cttaaggtat gaaaaaagga gctgaagcta tataatagct
     1081 attaatgcca ctggtatcag tgaatcatgt at
//
LOCUS       DADMJE010000330         1102 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.335, whole genome shotgun sequence.
ACCESSION   DADMJE010000330 DADMJE010000000
VERSION     DADMJE010000330.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1102)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1102)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1102
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.335"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..150)
                     /locus_tag="JN001_004225"
     CDS             complement(<1..150)
                     /locus_tag="JN001_004225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055213.1"
                     /translation="MILRHRTGPAFQAIKDSLAVGLNALTLTDITKNATYGVEIESLV
                     LEINAP"
     gene            complement(147..350)
                     /locus_tag="JN001_004226"
     CDS             complement(147..350)
                     /locus_tag="JN001_004226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008439250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1737 domain-containing protein"
                     /protein_id="HAY9055214.1"
                     /translation="MVERTMAFKHYDVVRAAPPSDLAEKLTHKLKEGWQPFGSPVAIT
                     PYTLMQAIAAEGDVVVSGATEPE"
     gene            596..931
                     /gene="iraM"
                     /locus_tag="JN001_004227"
     CDS             596..931
                     /gene="iraM"
                     /locus_tag="JN001_004227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-adapter protein IraM"
                     /protein_id="HAY9055215.1"
                     /translation="MKWIVIDTVIQPSCGISFSVIWSKIKLIIWYQSDAFLPPESIFT
                     LTHTGIMLNNKVLPVTIYNVVPFNKTFWNLIKNSQECPTNTDNVLNECFNNRCTLQIC
                     PYGLKQQSP"
BASE COUNT          353 a          268 c          191 g          290 t
ORIGIN      
        1 cggtgcattt atctccagca ccagactttc tatctcaacg ccatacgttg catttttggt
       61 aatatccgtc agcgtcagtg catttagtcc cactgccaga ctgtctttta tggcctggaa
      121 tgccgggcca gtacgatgac gtagtatcac tccggctcag ttgcaccact gaccaccaca
      181 tcaccttctg ctgcaatcgc ctgcatcagg gtataagggg ttatggccac cggactacca
      241 aacggctgcc agccctcttt cagtttatgt gtcagctttt ccgcaagatc tgacggcggc
      301 gccgccctga caacatcata gtgtttaaat gccatggttc tttccaccat ctgaaaaata
      361 attctttaaa atacctgaca tgtaatacag aaaaaacaca aaaccatacc ttaaataaaa
      421 acctgattat caagcagata tgcatggata aactacaaga cgagatataa accaccctgc
      481 atttaaataa acaataaaca acatcagaaa aataattctg ctctatggtt tacattcaaa
      541 aatatcattt atacttttca gaacatcacc agcaaggcat aaacaaggaa actaaatgaa
      601 gtggattgtg attgatacag ttatccagcc atcatgcgga atatcttttt cagtcatatg
      661 gagtaaaata aaattaataa tctggtatca atcggatgct ttcttacctc ctgaaagtat
      721 atttacactg actcacacag gcatcatgct caataacaaa gtgctacctg taaccattta
      781 caacgtagta ccattcaata aaacattctg gaatttaatc aaaaacagcc aggaatgccc
      841 tacaaataca gataacgtat tgaatgaatg ctttaataac cgttgcactc tgcaaatatg
      901 tccttatgga ctaaaacaac aaagtccata aggagtttac tcacatctga caaaatcaat
      961 ataaacagcc cctccggaga ggggctggag agtggcgcta tgtgccattg catggtgccg
     1021 ggtgcctccc ggtgaattca gtaccagcac ctgaatccgc gattatccca tatacctact
     1081 cgctgattgc ccctccgcac ag
//
LOCUS       DADMJE010000331         1096 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.336, whole genome shotgun sequence.
ACCESSION   DADMJE010000331 DADMJE010000000
VERSION     DADMJE010000331.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1096)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1096)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1096
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.336"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>1096
                     /locus_tag="JN001_004228"
     CDS             <1..>1096
                     /locus_tag="JN001_004228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY9055216.1"
                     /translation="YATDPAGNRLPDPELHPDSTLSMWPDNRIARDAHYLYRYDRHGR
                     LTEKTDLIPEGGIRTDDERTHWYHYDSQHRLVHYTRTQYAEPLVESRYLYDPLGRRVA
                     KRVWRRERDLTGWMSLSRKPEVTWYGWDGDRLTTIQNDRTRIQTVYQPGSFTPLIRVE
                     TATGELAKTQRRSLADALQQSGGEDGGSVVFPPVLVQMLDRLESEILADRVSEESRRW
                     LASCGLTVAQMKNQMDPVYTPARKIHLYHCDHRGLPLVLISTEGATEWCAEYDEWGNL
                     LNEENPHHLQQLIRLPGQQYDEESGLYYNRHRYYDPLQGRYITQDPIGLKGGWNFYQY
                     PLSPVNSMDPLGLYEFKSKNIDDIGIFALAM"
BASE COUNT          263 a          303 c          337 g          193 t
ORIGIN      
        1 gtatgccaca gacccggcag gtaaccgcct gcccgacccg gagctgcacc cggacagcac
       61 cctcagcatg tggccggata accgtatcgc ccgtgacgcg cactatcttt accggtatga
      121 ccgtcacggc aggctgacag agaaaaccga cctcatcccg gaagggggta tccgcacgga
      181 tgatgagcgc acccactggt accattacga cagtcagcac cggctggtgc actacacgcg
      241 gacacaatat gcagagccgc tggtcgaaag tcgctatctt tacgacccgc tgggccgcag
      301 ggtggcaaaa cgggtatggc ggcgtgaacg ggacctgacg ggctggatgt cgctgtcacg
      361 gaaaccggaa gtgacctggt acggctggga cggcgaccgg ctgaccacaa tacagaacga
      421 cagaacccgc atccagacgg tttatcagcc gggaagcttc acgccactca tcagagttga
      481 aaccgccacc ggtgagctgg cgaaaacgca gcgccgcagc ctggcggatg cccttcagca
      541 gtccggcggc gaagacggtg gcagtgtggt gttcccgccg gtgctggtgc agatgctcga
      601 ccggctggaa agtgaaatcc tggctgaccg ggtgagtgag gaaagccgcc gctggctggc
      661 atcgtgcggc ctgaccgtgg cgcagatgaa aaaccagatg gacccggtgt acacgccggc
      721 gcgaaaaatt cacctgtacc actgcgacca tcgcggcctg ccgctggtgc ttatcagcac
      781 ggaaggggca acagaatggt gcgcagaata cgatgagtgg ggcaacctgc tgaatgaaga
      841 gaacccgcat catctgcagc agctcattcg cctgccgggg cagcagtatg atgaggagtc
      901 cggcctgtat tacaaccgcc accgctatta tgacccgctg caggggcgat atatcactca
      961 ggatccgatt gggctgaagg ggggatggaa tttttatcag tatccgctga gcccggtgaa
     1021 tagcatggat ccattaggat tatatgaatt taaatcaaaa aatatagatg atattggaat
     1081 atttgcattg gcaatg
//
LOCUS       DADMJE010000332         1092 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.337, whole genome shotgun sequence.
ACCESSION   DADMJE010000332 DADMJE010000000
VERSION     DADMJE010000332.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1092)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1092)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1092
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.337"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(198..464)
                     /locus_tag="JN001_004229"
     CDS             complement(198..464)
                     /locus_tag="JN001_004229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000957717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055217.1"
                     /translation="MLTQTIFPCLPQKQENIILEVSNPVLLSSTVTTDGYTVFNKKAA
                     IYELQIPATNRTKTLKFTATEMQWLTKINEVGIVEKQSQRHSNI"
     gene            complement(646..1044)
                     /locus_tag="JN001_004230"
                     /pseudo
     CDS             complement(646..1044)
                     /locus_tag="JN001_004230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612066.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
BASE COUNT          281 a          224 c          226 g          361 t
ORIGIN      
        1 cgtccctgca ctcgaataat ggtgaagaaa gcatgatgaa tatatcacga taacgttcag
       61 tatgtatcga ggatagatgg agttactcct ctctgaaata gaattactgc tctacttttt
      121 ctgtttccag aaattattag taacaaaccc tgatatattc ttttgaaaat ggagcttaaa
      181 cgagtctgaa attaacttca gatattagaa tgccgttggc tttgtttttc aacaattcct
      241 acttcattta tctttgtcaa ccattgcatt tctgtagcag tgaatttcaa cgttttcgtc
      301 cggttggtag caggtatttg taattcgtat atagctgctt ttttattgaa aacagtatat
      361 ccatctgtag taacagtaga agataataat acaggatttg acacttcaag gatgatattt
      421 tcttgttttt gtggaaggca agggaatata gtttgtgtaa gcatattgct tccttatgtt
      481 atattttagt aaagaattta ttttttacat tatagtcggc taaatgaagt ttactgtaaa
      541 aaaacgatac ttttttcgta agcgatgaga tgtggagcca gaaaaatggc tgcgttacgt
      601 cattgaactg tccttgaccc acgatattca gacagtcgtt gtatcttaag ttgacattac
      661 ccgctgacgt cgatattccc ttggtgagag ataacccaac gcactatgcg gatggttttc
      721 attgtaatgc tcgatcgcca ctgcaaggtt atgcaatgcc gttcttggtt tcggcatgaa
      781 cgcgatgcag tcttccttca tcgttttcac gaaccgttct gctattccat tactctgagg
      841 gctactgact gccgtcgtgc agggctccag attcaactct ctggcgaact gccgtgtttc
      901 atgagccgta taagccgaac cgttatcggc cactggattg gccgttccgg tcctttatcg
      961 ccatatcgct gacatgacat cctgcaccgt tgctttgtca taatctcccg tgcctgctgc
     1021 ccagtctatg gcttcacgat cgcaatatgg aacgtaacgc tgtcatcggg agaatcgtca
     1081 atgcggcatt cg
//
LOCUS       DADMJE010000333         1050 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.338, whole genome shotgun sequence.
ACCESSION   DADMJE010000333 DADMJE010000000
VERSION     DADMJE010000333.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1050)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1050)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1050
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.338"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..842
                     /locus_tag="JN001_004231"
     CDS             <1..842
                     /locus_tag="JN001_004231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416329.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HAY9055218.1"
                     /translation="LVGYIAWLATAYRMSFSREINLGLAQHEFELFCQPLLNARSQQC
                     IGVEILLRWNNPRQGRISPDVFIPIAEEHHLIVPLTRYVMAETIRQRHVFPMSSQFHV
                     GINVAPSHFRRGVLIKDLNQYWFSAHPIQQLILEITERDALLDVDYRIARELHRKNVK
                     LAIDDFGTGNSSFSWLETLRPDVLKIDKSFTAAIGSDAVNSTVTDIIIALGQRLNIEL
                     VAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLAGSQPPPARHNGHITPIM
                     PLR"
BASE COUNT          239 a          267 c          266 g          278 t
ORIGIN      
        1 tactggtggg ctacatcgcc tggctggcga ccgcttaccg gatgagcttt tcccgcgaaa
       61 tcaatctggg cctggcgcaa catgagttcg aattgttctg tcagcctttg cttaatgcgc
      121 gcagccagca atgtattggt gtagagattt tgctgcgctg gaacaatccg cgtcagggcc
      181 ggatttcacc ggatgtgttt attcctatcg cggaagaaca tcatttaatt gtgccactga
      241 cccgctatgt gatggcagaa accattcgtc agcgccatgt tttcccgatg agtagtcagt
      301 ttcatgttgg cattaacgtc gcacccagcc attttcgccg tggtgtgctg ataaaagatc
      361 tcaatcagta ctggtttagc gctcacccga ttcagcaact gatcctcgaa atcaccgaac
      421 gcgatgcctt actggatgtt gattatcgga ttgcccgcga gctacatcgt aaaaacgtca
      481 aactggcgat tgatgacttc ggcaccggca acagttcatt ttcctggctt gaaacattac
      541 gtcctgacgt gctgaaaatt gataagtcat ttaccgcagc tataggttct gacgcggtta
      601 actcgacggt gaccgatatc atcatcgcgc tggggcaaag actgaatatt gaactggtgg
      661 cggagggcgt ggaaacgcaa gaacaggcga agtatttgcg ccgtcatggc gtgcatattt
      721 tgcaagggta tttgtacgca cagccgatgc cgctacgcga ttttcccaaa tggctggcgg
      781 gcagccaacc gccgcccgcc cggcataatg gacatatcac gcccattatg ccgttacgtt
      841 aacgctgata tgactttccg tgtcaaaccg gaatctctaa ttttgacgat tttcttttta
      901 ggtttaattc cctgagggcg acgtagcagt aaatccgacg gtgaatcacg ctgatattcg
      961 cgggttggat accgcattac agaggtccgt catatgagcc tgccactttc ttacgtcgcg
     1021 aatcagcttt gttccgccgt cgccaagcgc
//
LOCUS       DADMJE010000334         1049 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.339, whole genome shotgun sequence.
ACCESSION   DADMJE010000334 DADMJE010000000
VERSION     DADMJE010000334.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1049
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.339"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            264..1049
                     /locus_tag="JN001_004232"
                     /pseudo
     CDS             264..1049
                     /locus_tag="JN001_004232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005226013.1"
                     /note="internal stop; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
BASE COUNT          309 a          240 c          246 g          254 t
ORIGIN      
        1 acccttttgc ttttatatct gcgtctaaaa taaaaatgag ccgcaggtta accgcaaaag
       61 ttacatgctc acatagcaaa aagaatagcc aacttcatta tggcttcagt gagatgtatg
      121 gtcgtaggat ttcatacatt gacactggtt atacatacag taaaaatact ctctactgga
      181 gggcattttt tatggcagta cgaaaactca ccactgggaa atggctttgc gaatgttacc
      241 ccgccggacg aagtgggcgt cgtgtgcgta aacaattcgc caccaaaggc gaagcactgg
      301 cttttgagcg ccacacgatg gaagaaaccg aagcaaagcc ctggctgggt gaatcagtgg
      361 atcgtcgaac actgaaagac gtggttgagc tatggttcaa actacatggt aaatctctga
      421 cagctgggca gcatgtctat gacaaattgc tgttgatggt tgacgctctg ggcaatcctc
      481 ttgcaaccga tctcacctct aaaatgtttg cccactatcg agataaacgc ctgacaggcg
      541 ggatctactt cagcgagaaa tggaagaaag gagcaagccc ggtcaccatt aacctggagc
      601 aaagctatct aagtagtgtt tttagcgaac tatcccgtct gggcgaatgg tcgtatccga
      661 acccactgga gaacatgcga aaattcacca tcgcagaaaa agagatggca tggcttaccc
      721 atgagcagat tgttgaattg ctggctgatt gcaaacgtca ggacccaatt ctggcactgg
      781 tagttaagat atgcttaagc acaggcgcac gctagcgtga agccgtaaat cttacccgct
      841 cacaggtgac caaataccga attacctttg tcagaacgaa ggggaagaaa aacagaagca
      901 tccctatcag taaagagctt tacgaagaga tcatggcgct tgatgggttc aatttcttca
      961 cagactgcta ttttcaattt ttatccgtga tggaaaaaac gtctatcgtg ctccctcgcg
     1021 gtcaactcac acacgttctg cgccatacg
//
LOCUS       DADMJE010000335         1044 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.340, whole genome shotgun sequence.
ACCESSION   DADMJE010000335 DADMJE010000000
VERSION     DADMJE010000335.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1044
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.340"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..1044)
                     /locus_tag="JN001_004233"
                     /pseudo
     CDS             complement(1..1044)
                     /locus_tag="JN001_004233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001591423.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-binding protein"
BASE COUNT          261 a          277 c          247 g          259 t
ORIGIN      
        1 ctggccagtt tttttcaaag taaatacctt taatacacgg ttgcatacgt aaagacttca
       61 cttcggtaat aaaagaacct tgcgaatatt gaatcgttaa tctgtgattt ttgtcttcag
      121 cacgttcaga gcgaaaacgc cattcttctt ttgcgccgcg acgagtttgt gggaggcatt
      181 tgccttgtgg atcaataacc atccgtgctc cacgactgcc accacctgcg tcaatataat
      241 gcgtcaattg cgttaatacg gcggcagaag tcagcgtcat atgccgccac ataaacagtt
      301 cggcaatttc gcctgcgtga ttgatggtta aaccgtgttg ttgtacaaac tcacttagca
      361 gcagggcgtc acgggtggca tgacgaactt tatcggcatg acaaataaat ccggcgtaat
      421 cagacattcg cgcctggatt ttgtctttca ccgttaccag cgccattccg ttctcgtttg
      481 ccagtgcctg agcgataact tctctgacta tattcagaga tgaggctacc agctgcgcga
      541 catcaccctc aacagaccgc ttttgcgtgc aaccaataaa acgtgccaga cgaacagcaa
      601 aaacctgccc ggcattcaat gctgcaccac tagggcgagt gacgccgtgt gtgccagcaa
      661 cttcccccac ggcgaaacag ccgggcaggg aggtttgtcc ccagatatcc acttcaatgc
      721 cgccattcat atgctgatta ttcatggcaa actgcaaagg ctgtgtggtg agatcgtaac
      781 cgtgcatctt atacagcgag atagacagcg gattcattcg ttgcagccgt tcgatgggcg
      841 atggtgccag agcgtcgtta ttttccagat acgcgcgaac gtcgtcgtcc agtcgatcta
      901 atgagaacgg caggtcaccc ggcaccgctt caggattgcg attgaaatcc ataaatacct
      961 gacgccctga ttgctgctct tgcgctactg ccatatctaa caagcggagc caaaatccat
     1021 cacccgagtg gcgtggaacg gcca
//
LOCUS       DADMJE010000336         1020 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.341, whole genome shotgun sequence.
ACCESSION   DADMJE010000336 DADMJE010000000
VERSION     DADMJE010000336.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1020)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1020)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1020
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.341"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JN001_004234"
     CDS             complement(<1..767)
                     /gene="ipaH3"
                     /locus_tag="JN001_004234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="T3SS effector E3 ubiquitin-protein ligase IpaH3"
                     /protein_id="HAY9055219.1"
                     /translation="MSIMLPINNNFSLSQNSFYNTISGTYADYFSAWDKWEKQALPGE
                     NRNEAVSLLKECLINQFSELQLNRLNLSSLPDNLPPQITVLEITQNALISLPELPASL
                     EYLDACDNHLSTLPELPASLKHLDVDNNQLTMLPELPALLEYINADNNQLTMLPELPT
                     SLEVLSVRNNQLTFLPELPESLEALDVSTNLLESLPAVPVRNHHSEETEIFFRCRENR
                     ITHIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA"
BASE COUNT          291 a          163 c          249 g          317 t
ORIGIN      
        1 tgggcggttt gttgcgacag agactccctg atccgtgagg acagaggatt gtcttcgagg
       61 atgatagtgc aggtcggatc aaggctaagt atattttccg gaatgtgtgt gatgcgattc
      121 tcgcggcacc ggaaaaatat ctcggtttcc tctgagtgat gatttcttac aggtacggct
      181 ggtaggcttt ccagaagatt agtacttaca tcgagcgctt ccagtgattc aggtaactca
      241 gggagaaatg tcagctggtt atttcttact gagagcactt ccagcgatgt aggtaattca
      301 ggaagcatgg ttagctgatt gttatctgca ttaatatatt ccagcaatgc aggcaattca
      361 ggaagcatgg ttagttggtt gttatctaca tcaagatgtt tcagagatgc gggtaattca
      421 ggaagtgttg acaggtgatt gtcacaggcg tcaaggtatt ccagcgatgc tggcaattct
      481 ggtaatgata ttagggcatt ctgagtaatt tccagaacag tgatttgagg tggtaagttg
      541 tcaggtagcg aggacagatt taaacgattc agttgaagct cactgaactg attgatgaga
      601 cattctttaa gtagggagac cgcttcattc cgattttcac cggggagcgc ttgtttttcc
      661 catttatccc atgctgaaaa gtaatcagca tatgtaccgg aaatagtgtt ataaaaagaa
      721 ttttgggaca atgaaaagtt attatttatc ggtaacatga tggacattca gttaaagccg
      781 atggacaaat ggctttgtta aaagaaataa gtaggagttt ttatgaagtt cattccatga
      841 aatgaacttc agcacttttt tattataaaa ggacaaacaa aattggctgt aaaaaaacga
      901 tactgtttca gttaactgtg aatagcttgc ttgcaccgta ttgttcttgt ttttcggtta
      961 gttaaacatc gtacttcata tttgaacgtt ctgccggaat gcattatcaa tagaggtaaa
//
LOCUS       DADMJE010000337         1009 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.342, whole genome shotgun sequence.
ACCESSION   DADMJE010000337 DADMJE010000000
VERSION     DADMJE010000337.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1009)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1009)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1009
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.342"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            201..395
                     /gene="bfd"
                     /locus_tag="JN001_004235"
     CDS             201..395
                     /gene="bfd"
                     /locus_tag="JN001_004235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin-associated ferredoxin"
                     /protein_id="HAY9055220.1"
                     /translation="MYVCLCNGVSDKKIRQAVRQFHPQSFQQLRKFIPVGNQCGKCIR
                     AAREVMQDELMQMPEFKEIA"
     gene            468..944
                     /gene="bfr"
                     /locus_tag="JN001_004236"
     CDS             468..944
                     /gene="bfr"
                     /locus_tag="JN001_004236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_709111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterioferritin"
                     /protein_id="HAY9055221.1"
                     /translation="MKGDVKIINYLNKLLGNELVAINQYFLHARMFKNWGLMRLNDVE
                     YHESIDEMKHADKYIERILFLEGTPNLQDLGKLGIGEDVEEMLQSDLRLEQEGAKDLR
                     EAIAYADSVHDYVSRDMMIEILADEEGHIDWLETELDLIGKIGLQNYLQSQIKVKD"
     gene            complement(941..>1009)
                     /locus_tag="JN001_004237"
     CDS             complement(941..>1009)
                     /locus_tag="JN001_004237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HAY9055222.1"
                     /translation="PFGPFLAAAGFVIGWDSLLIGR"
BASE COUNT          302 a          205 c          231 g          271 t
ORIGIN      
        1 gctaaagttc tgggttaatt acacgttaat tagttttgaa ttgaaaaggg cgcttcggcg
       61 ccctttttgc tgcccgtaat ttgagctcga aatatttagt cgtaattttg ctcgctgaac
      121 tatggcgcaa ataaaactgt gctattgtaa tcataatcat tctcatttac actttgcgca
      181 gaatttgaac gggagcaatc atgtacgttt gtttgtgtaa tggtgtaagt gacaaaaaaa
      241 ttcgccaggc agtccgtcag tttcatccgc aatctttcca acaattgcgt aagtttattc
      301 ctgtgggaaa tcaatgcggt aagtgcattc gcgccgcgcg cgaagtgatg caggacgagt
      361 tgatgcagat gccagaattt aaagagattg cctgaagacc acgcttattt tttgacatcc
      421 cgctagcccc atctacgctc taatagtgga agcggaggga ctataaaatg aaaggtgatg
      481 ttaaaatcat aaattatctc aataaactat tgggaaatga gcttgtcgca atcaatcagt
      541 attttctcca tgcccggatg tttaaaaact ggggcctgat gcgtctcaat gacgtcgaat
      601 accatgaatc catcgatgag atgaaacacg ctgataaata tatcgagcgt attttgtttt
      661 tagaaggaac ccccaactta caggatttag gcaaactggg gattggtgaa gatgtcgagg
      721 agatgctgca atccgacctg cgattagaac aggaaggcgc gaaggatctg cgtgaggcta
      781 tcgcatatgc cgacagcgtt catgactatg ttagccgcga tatgatgatc gagatccttg
      841 ctgatgaaga aggtcatatc gactggctcg aaactgaact ggatctcatc ggtaaaattg
      901 gcctacaaaa ttacctgcaa tcacaaatta aagttaaaga ttaacggcct atcagcaaac
      961 tatcccagcc tataacgaaa cccgcagccg ccagaaatgg cccaaaagg
//
LOCUS       DADMJE010000338         1006 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.343, whole genome shotgun sequence.
ACCESSION   DADMJE010000338 DADMJE010000000
VERSION     DADMJE010000338.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.343"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>1006
                     /locus_tag="JN001_004238"
     CDS             <1..>1006
                     /locus_tag="JN001_004238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HAY9055223.1"
                     /translation="VEERQRGLTSLRQINRKTREVIGIAFDDPAYVTWIAYNPEPETA
                     RLRYGYSSMTTPDTLFELDMDTGERRVLKQTEVPGFDAANYRSEHLWIVARDGVEVPV
                     SLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELG
                     QQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYAMGGSAGGMLMGVAINQRPE
                     LFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQA
                     YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDNHLLLLCTDMDSGHGGKSGRFKSYE
                     G"
BASE COUNT          244 a          223 c          266 g          273 t
ORIGIN      
        1 ggttgaagag cgtcagcgcg ggttaaccag tttgcgccaa attaaccgca agacccggga
       61 agtcattggt attgcctttg atgatccagc ctatgtgacc tggattgcct acaatccaga
      121 acctgaaacc gcgcgattgc gttatggtta ttcttccatg accacaccag acactttgtt
      181 tgaactggat atggataccg gtgagcgtcg tgtattaaaa caaacggaag ttcctggttt
      241 tgatgcggcg aattaccgca gtgaacacct gtggatagtc gcccgtgatg gcgtcgaagt
      301 tccggtttcg ttggtctacc atcgcaaaca ttttcgcaaa ggacacaacc cgttgctggt
      361 gtatggctat ggttcttacg gcgcaagtat tgatgccgat ttcagtttta gccgcttgag
      421 tttgttagat cgtggctttg tctacgccat tgtccatgtt cgcggcggtg gtgagctggg
      481 gcaacaatgg tacgaagacg gaaaatttct gaagaagaaa aatacgttta atgattatct
      541 tgatgcctgc gatgcattgt taaaactggg ctatggctct ccttcgcttt gttatgcgat
      601 gggcgggagt gcggggggca tgttgatggg cgttgcaatt aatcaacgcc cggaattatt
      661 ccacggcgtt atcgcccagg taccgtttgt tgatgttgta acaacgatgc ttgatgaatc
      721 aattcctctt accactggtg agtttgaaga gtggggtaac ccgcaggatc cgcaatatta
      781 cgagtacatg aaaagctaca gcccgtatga caacgtcacc gcacaggctt atccgcattt
      841 actggtaacg accggtttac acgattctca ggtgcaatat tgggaaccgg caaaatgggt
      901 cgctaaattg cgcgagctga aaaccgataa ccatctttta ttgctctgta ccgacatgga
      961 ctcaggccat ggcggtaaat ctggccgctt taaatcgtac gaaggc
//
LOCUS       DADMJE010000339          999 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.344, whole genome shotgun sequence.
ACCESSION   DADMJE010000339 DADMJE010000000
VERSION     DADMJE010000339.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 999)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 999)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..999
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.344"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            113..463
                     /gene="tnpB"
                     /locus_tag="JN001_004239"
     CDS             113..463
                     /gene="tnpB"
                     /locus_tag="JN001_004239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family insertion sequence element accessory
                     protein TnpB"
                     /protein_id="HAY9055224.1"
                     /translation="MISLPSGTRIWLVAGITDMRKSFNGLGEQVQHVLNDNPFSGHLF
                     IFRGRRGDMIKILWADADGLCLFTRRLEEGQFIWPAVRDGKVSITRSQLAMLLDKLDW
                     RQPKTSRLNALTML"
     gene            494..>999
                     /locus_tag="JN001_004240"
     CDS             494..>999
                     /locus_tag="JN001_004240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY9055225.1"
                     /translation="MNQKYLIRIAELECQLRQKDQQLSLVEETEAFLRSALARAEEKI
                     EEDEREIEHLRAQIEKLRRMLFGTRSEKLRREVEQAEALLKQREQDSDRYSGREDDPQ
                     VPRQLRQSRHRRPLPEHLPREINRLEPEESCCPECGGELDYLGEVSAEQLELVSSALK
                     VIRTERVK"
BASE COUNT          254 a          255 c          284 g          206 t
ORIGIN      
        1 cagttagtgc cagctcctgc aaggtggagt tccgtcacgg taacatgacg ctggaaaatc
       61 cttcaccaga gctgctcaca gtgttgatcc gtgaactgac cgggagggga cgatgatctc
      121 actcccgtca ggcacccgca tctggctcgt tgctgggata accgatatgc gtaagtcttt
      181 caacgggctg ggtgaacagg tacagcatgt gctgaatgat aatcccttct ccggtcacct
      241 gttcatcttc cgtggccgac ggggtgacat gattaaaatc ctgtgggctg atgctgatgg
      301 tctgtgcctg ttcaccagac gcctggagga aggccagttt atctggcctg ctgtgcgtga
      361 cggcaaggta tccattaccc gctcgcaact ggcaatgctc ctcgataagc tggactggcg
      421 tcagccaaaa acatcccgcc ttaatgcact gacaatgttg taaaaatgtc atggccggat
      481 tataaaaacg gccatgaatc aaaaatacct cattcgcatt gcagaactgg aatgccagct
      541 ccgtcagaaa gaccagcaac tgagtctggt tgaagagacg gaggccttcc tgcgctctgc
      601 actggcccgc gccgaagaaa agatcgaaga agatgaacgg gaaatagaac atctgcgggc
      661 tcagatagaa aaactgcgcc ggatgctgtt cggtacccgt tctgaaaaac tgcgtcgtga
      721 agttgaacag gctgaggccc tgctgaaaca acgcgaacag gacagtgatc gttacagtgg
      781 gcgggaagac gatccgcagg ttccccgcca gttgcgacag tctcgtcatc gtcgcccgtt
      841 accggagcat ctgccccgcg aaataaatcg cctggagcca gaagaaagct gttgcccgga
      901 gtgtggcggt gagctggatt atctggggga agtcagcgca gaacaactgg aactggtgag
      961 cagcgctctg aaagtgatcc gcacagaacg ggtaaaaaa
//
LOCUS       DADMJE010000340          987 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.345, whole genome shotgun sequence.
ACCESSION   DADMJE010000340 DADMJE010000000
VERSION     DADMJE010000340.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 987)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 987)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..987
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.345"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..978
                     /locus_tag="JN001_004241"
     CDS             <1..978
                     /locus_tag="JN001_004241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000080172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY9055226.1"
                     /translation="CEHLPLYRQSEIFARQGVELSRALLSNLVDACCQLMTPLNDALY
                     RYVMNSRKVHTDDTPVKVLAPGRKKAKTGYIWTYVRDDRNAGSPEPPAVWFAYSPDHQ
                     GKHPEQHLSPFRGILQADAFNGYDRLFSAEREGGALTEAGCWAHARRKVHDVYISTKS
                     ATAEEALKLIGELYAIEHEIRGLPVSERLAVRQMQSKPLLTSLYKLMQEKEHTLSKKC
                     RLRDAFRYIRKHWVALCNFSDDGLAEADNNAAERALRAVCLGKKNFMFFGSDHGGERG
                     ALLYGLIGTCRLNGIDPEAYLRYILSVLPEWPSNRVDELLPWNVALTNK"
BASE COUNT          248 a          244 c          285 g          210 t
ORIGIN      
        1 tgcgaacacc tgccactgta tcgtcagagt gaaatttttg cccgtcaggg tgtcgaactg
       61 agccgtgcat tactctccaa cttggttgac gcgtgctgcc agttaatgac gccgctgaat
      121 gatgctctgt accgttatgt aatgaacagc cgcaaagttc acactgatga cacaccagta
      181 aaagtgctgg caccgggcag gaagaaggcg aaaacaggat atatctggac gtatgtccgg
      241 gatgacagga atgccggttc gccagagcct ccggcggtct ggttcgccta ctcaccggac
      301 catcagggta aacatccgga gcagcacctt agtcccttcc ggggtatcct gcaggcagat
      361 gcgtttaatg gttacgatcg gctgttcagt gccgaacgag aaggcggcgc gttgacggaa
      421 gcaggatgct gggctcatgc gcggcgcaaa gtccacgatg tatatatcag taccaaaagc
      481 gcgacagcgg aagaagccct gaaactaatc ggtgagctgt acgccatcga gcacgaaata
      541 cgcgggttgc cggtgtctga acgcctggcg gtcaggcaaa tgcagagtaa accgctactg
      601 acttccctgt ataagctgat gcaggagaaa gaacacacgt tatcgaaaaa atgccgtctg
      661 agagatgcgt tccggtatat caggaagcac tgggttgcgt tgtgcaactt cagtgatgat
      721 ggtctggctg aggcggataa taatgccgcg gaaagagcgc ttcgtgcagt ctgtctcgga
      781 aagaaaaact ttatgttctt cggcagcgat cacggtggag agcgtggtgc gctactgtac
      841 gggctgatcg gcacctgccg actgaacggt atcgatccgg aagcgtatct gcgctatatc
      901 ctgagcgtac tgccggaatg gccttccaac cgtgttgacg aactcctgcc atggaacgta
      961 gcactcacca ataaataagc gtcaata
//
LOCUS       DADMJE010000341          962 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.346, whole genome shotgun sequence.
ACCESSION   DADMJE010000341 DADMJE010000000
VERSION     DADMJE010000341.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 962)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 962)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..962
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.346"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(5..946)
                     /locus_tag="JN001_004242"
     CDS             complement(5..946)
                     /locus_tag="JN001_004242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000232699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HAY9055227.1"
                     /translation="MAGALQTPTLSIFLADELKARPIMVGFFFTGSAIMGILVSQFLA
                     RHSDKQGDRKLLILLCCLFGVLACTLFAWNRNYFILLSTGVLLSSFASTANPQMFALA
                     REHADRTGRETVMFSTFLRAQISLAWVIGPPLAYELAMGFSFKVMYLTAAIAFVVCGL
                     IVWLFLPSIQRNIPVVTQPVEILPSTHRKRDTRLLFVVCSMMWAANNLYMINMPLFII
                     DELHLTDKLAGEMIGIAAGLEIPMMLIAGYYMKRIGKRLLMLIAIVSGMCFYASVLMA
                     TTPAVELELQILNAIFLGILCGMRCTGNSGHYHLFFF"
BASE COUNT          299 a          226 c          222 g          215 t
ORIGIN      
        1 ctgcttaaaa aaagaacaaa tggtagtgtc cgctattgcc agtacacctc ataccacaga
       61 gaataccaag gaagatggca tttagaattt gcaattccag ctcaaccgcc ggagtcgtcg
      121 ccatgagtac gctggcgtaa aaacacatac cactcacgat agcaatgagc attaatagtc
      181 gcttgccaat acgtttcatg taatagcctg cgattaacat catcggaatt tccagaccgg
      241 cagcgatacc aatcatttct ccagccagtt tatcggttag atgcagttca tcaataataa
      301 atagcggcat atttatcatg tagagattat tcgccgccca catcattgaa cagaccacaa
      361 aaagtagccg cgtatcccgc ttcctatggg tggagggtaa aatttctacg ggttgggtaa
      421 cgacaggaat atttctttgt attgatggca aaaacaacca gactatcagc ccgcaaacaa
      481 caaatgcgat ggcagcggtg agatacatca ctttaaaact aaaccccatt gccagttcat
      541 aagcgagcgg tggcccgata acccaggcaa gcgagatctg agcacgtaaa aatgtactga
      601 acatgaccgt ctcacggcct gttctgtcgg cgtgttcacg ggcgagggcg aacatttgcg
      661 ggtttgcggt agaagcaaaa ctactcagaa gtacgcccgt agagaggaga atgaagtagt
      721 tgcgattcca cgcaaaaagc gtgcaggcca gcactccaaa taagcaacat agcagaatca
      781 gtaatttacg gtcgccttgt ttatcggagt gccttgccag aaattgactg accagaattc
      841 ccataatagc gctaccggtg aagaaaaaac ctaccattat aggacgggct ttcagttcat
      901 ctgcgaggaa tatacttagg gtaggagtct gaagagcgcc cgcaataccc gtcagaaagg
      961 cg
//
LOCUS       DADMJE010000342          946 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.347, whole genome shotgun sequence.
ACCESSION   DADMJE010000342 DADMJE010000000
VERSION     DADMJE010000342.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 946)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 946)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..946
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.347"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            726..944
                     /gene="ccdA"
                     /locus_tag="JN001_004243"
     CDS             726..944
                     /gene="ccdA"
                     /locus_tag="JN001_004243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system antitoxin CcdA"
                     /protein_id="HAY9055228.1"
                     /translation="MKQRITVTIDSDSYQLLKSANVNISGLVNTAMQKEARRLRAERW
                     QAENQQGMAEIARFIEMNGSFADENRDW"
BASE COUNT          255 a          224 c          222 g          245 t
ORIGIN      
        1 gatactggaa aaactctaac tcggtggcca gtttttgttg accacttcag tgattattgg
       61 ctctggcgac ggctttcaga acctctttca ccattctggt gtggactttc tggtgctcca
      121 ggttgtgtga catgggaact cattctggat ggttactctg aaagctcata ttctgccaca
      181 ccccgatttg cagccgccag gctgccgtgg ttcgtgaacc gggctataac ctgcagtcgg
      241 ttgttgaacg cctgacaaca ggaaatcagc caggccagca accacgcgga ctgacagaga
      301 atcagaacct gaatcagcct gaaatcatac ccggggcagt acttcatcac cagtcaccaa
      361 tacccgtgtc agtacttcgc ggcctgacgc gatcacccga ctcagtactt ctgagcccgc
      421 ctccggtacc attctctgtg ggcccgtaca caacaacaga aaagggtgcc cggcccgggg
      481 cgcaaccgta ttacacttcc ggaaaatcgt tatacgcaga aaaatcggat cacgctgtgc
      541 ctgctttcat gtaatttact tacggtgtta taagtatgct aattatcgta taaaaaaatc
      601 gcagcagaaa aaattgtatt aaaaacttat agtgaattaa tggtgtactt tttatggata
      661 ttgatggttt gtaccattaa tatatactca tatacatatc ataagtatgt ttttgagggc
      721 ttatcatgaa gcagcgtatt actgtcacta tagacagtga cagctatcag ttacttaaat
      781 ccgcaaacgt gaatatctca ggcctggtaa atacggccat gcaaaaagag gcccgccgtc
      841 tgcgtgcgga acgctggcag gctgaaaatc agcaggggat ggctgagatc gcccgtttta
      901 ttgaaatgaa cggctctttt gccgatgaga acagggactg gtgaaa
//
LOCUS       DADMJE010000343          941 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.348, whole genome shotgun sequence.
ACCESSION   DADMJE010000343 DADMJE010000000
VERSION     DADMJE010000343.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 941)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 941)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..941
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.348"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            5..565
                     /locus_tag="JN001_004244"
     CDS             5..565
                     /locus_tag="JN001_004244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001367725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HAY9055229.1"
                     /translation="MFLNKNLTCVKPWSRLATPVIACHSRTPEVFRLAANHSKQQPSK
                     PCEAELTRALLFTVLSNFLEQSRFIALLMYILRSSVRDSVCRIIQSDIQHYWNLRIVA
                     SSLCLSPSLLKKKLKNENTSYSQIVTECRMRYAVQMLLMDNKNITQVAQLCGYSSTSY
                     FISVFKAFYGLTPLNYLAKQRQKVMW"
     gene            complement(611..687)
                     /locus_tag="JN001_004245"
     tRNA            complement(611..687)
                     /locus_tag="JN001_004245"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(651..653),aa:Arg,seq:tct)
BASE COUNT          259 a          227 c          217 g          238 t
ORIGIN      
        1 tctgttgttt ttaaataaga acttaacctg tgtaaagccc tggtcgcggc tggcaacccc
       61 ggttatcgct tgtcatagcc gtacaccgga agtgttccgg ctagccgcca accacagcaa
      121 gcagcaaccc agcaaaccct gcgaagcgga gttgacgcgc gcattacttt ttaccgtatt
      181 gtctaacttt cttgagcaat cgcggtttat tgccctactg atgtatatct tacgcagcag
      241 cgtccgcgac agcgtctgcc gcattattca aagcgatatt cagcattact ggaatctgcg
      301 aattgtcgcc agttcgctat gtttaagccc cagcctgctc aaaaagaaat taaaaaacga
      361 aaataccagc tatagccaga ttgtcacaga gtgtcgtatg cgttacgccg tacagatgtt
      421 attgatggat aacaaaaata tcactcaggt ggcgcaatta tgtggctata gcagcacgtc
      481 gtactttatc tctgttttta aggcgtttta cggcctgaca ccgttgaatt atctcgccaa
      541 acagcgacaa aaagtgatgt ggtgaagggc aaagcggaaa cggataagac gggcataaat
      601 gaagaagaaa tggcgcgccc tgcaggattc gaacctgcgg cccacgactt agaaggtcgt
      661 tgctctatcc aactgagcta agggcgcgtt gataccgcaa tgcggtgtaa tcgcgtgaat
      721 tatacggtca acccttgctg agtcaatggc ttttgatctg gttgctgaac aagtgaacga
      781 ccgcgtctga ttttctgatt tatttcgcta tagcggcaaa caaacgcaca ccgctgcgcg
      841 tctgaatcaa gaaaacccgt attttcatgt atcaaagtac aatttaccgc cctaacggaa
      901 aattgtccgc tcctatgaga ctggtaacta tgaaaccaac g
//
LOCUS       DADMJE010000344          928 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.349, whole genome shotgun sequence.
ACCESSION   DADMJE010000344 DADMJE010000000
VERSION     DADMJE010000344.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 928)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 928)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..928
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.349"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(45..381)
                     /locus_tag="JN001_004246"
                     /pseudo
     CDS             complement(45..381)
                     /locus_tag="JN001_004246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_009502602.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          305 a          167 c          168 g          288 t
ORIGIN      
        1 aatatgaaaa gatggtttaa ataccccgtt acttttgact tacactatac ggtatcgcat
       61 cgtttaatat tcgcaccggc cagattttta tttctattag ttgtcacaat actgaatgcg
      121 tacgaccaca gtattctggc tcctgtgtgg tcatgcttta attctgcgtt ccggacagat
      181 aagcagttgc ttgcaggaat ccttcttgtg ttaatgtcag ttcccctttt taccagtgct
      241 gatttccaca ttccgtccaa cagagcttat agcctttccc tggattatag cattgtccgg
      301 ctgaagttct ttttgaataa taatagaagc actgctggca gatccagtcc gtttttcata
      361 acccactgta ctgataacca taatctaatc agtagaaatt gagtcgaaaa taagcactac
      421 tccatacagg ataattagag gtcagtttga ttattcacaa ttcattatca gcattttctg
      481 tttctgacga aatcaacatg aaaagaacca tatatgataa ttattataat aacggcttta
      541 attggaatac atatattaca acgtattata tataattggt attctgggaa ctatattctc
      601 aaaatacagt agaaacgagg tatgtttctg gtggaaagga cagtgggatt aaaaagtaag
      661 aattgataaa aaaacgccag caacacatag tgccggcgga gggaataccc catggagaaa
      721 atgtgatgcc tagagcacca tgaatatata attaaaaata gttagagttg tcaatacttt
      781 cacaaaaata attttcgtag tttcgtagta tagaaagata tttttatgca tgacctacct
      841 gaatttgctc cgggtagagg ttataaataa aaattgaatc acgacaaaca caatattcat
      901 agtatggcga tgcctacgcc agcaagaa
//
LOCUS       DADMJE010000345          921 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.350, whole genome shotgun sequence.
ACCESSION   DADMJE010000345 DADMJE010000000
VERSION     DADMJE010000345.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 921)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 921)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..921
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.350"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..>921)
                     /locus_tag="JN001_004247"
     CDS             complement(<1..>921)
                     /locus_tag="JN001_004247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF898 family protein"
                     /protein_id="HAY9055230.1"
                     /translation="RFSYGITGGNVFFSCLVFVFFYFAILMTVSADMPLVGCVLTLSL
                     LVLLIFMAAKGLRYQALMTSLNGVRFSFNCSMKGFWWVTFFLPILMAIGMGTVFFIST
                     KMLHANSSSSVIISVVLMAIVGIVSIGIFNGTLYSLVMSFLWSNTSFGIHRFKVKLDT
                     AYCIKYAILAFLALLPFLAVAGYIIFEQILNAYDSSVYANDDIENLQQFMEMQRKMII
                     AQLIYYFGIAVSTSYLTVSLRNHFMSNLSLNDGRIRFRSTLTYHGMLYRMCALVVISG
                     ITGGLAYPLLKIWMIDWQAKNTYLLGDLDDL"
BASE COUNT          354 a          207 c          141 g          219 t
ORIGIN      
        1 aaggtcatcc aaatcgccca gcaaatacgt attttttgcc tgccagtcaa tcatccatat
       61 tttcagcagt ggataagcca gaccgcccgt aatcccggat atcactacca acgcacacat
      121 gcgataaagc ataccgtggt acgttaaagt tgagcgaaaa cgaatacgcc catcattcag
      181 tgacaggtta ctcataaaat gatttcgcaa cgacaccgtt aaataactgg tgctaacagc
      241 aatcccaaaa taatagatta actgcgcgat tatcatttta cgttgcattt ccataaattg
      301 ctgtaaattc tcaatatcat catttgcata cacagaacta tcatacgcat ttaatatttg
      361 ttcgaagata atataaccag caacagcgag aaaaggtaat aaagctaaaa atgcgaggat
      421 ggcatatttt atacaatacg cagtatctaa tttcaccttg aaacgatgta taccgaaact
      481 ggtattgctc cagagaaaac tcattaccag gctatataaa gtaccattaa aaataccaat
      541 ggaaacaata ccaactattg ccatcagaac cacagatata ataacactac ttgaactatt
      601 ggcatgtagc atctttgtcg agataaagaa aacagtcccc atcccaatgg ccattaaaat
      661 cggcaagaaa aaggttaccc accagaaccc tttcatagag caattaaaac taaatcttac
      721 gccgttgaga ctagtcatca aggcctgata acgcagtcct tttgctgcca taaatataag
      781 caaaaccaac agtgacaaag tcaaaacaca gccaacaagc ggcatatctg ctgacactgt
      841 cattaagatt gcgaaataga aaaaaacaaa aacaagacaa ctaaaaaaaa cattcccacc
      901 agtaattcca taagaaaatc g
//
LOCUS       DADMJE010000346          916 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.351, whole genome shotgun sequence.
ACCESSION   DADMJE010000346 DADMJE010000000
VERSION     DADMJE010000346.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 916)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 916)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..916
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.351"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..624
                     /locus_tag="JN001_004248"
                     /pseudo
     CDS             1..624
                     /locus_tag="JN001_004248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416251.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
     gene            675..>916
                     /gene="chbA"
                     /locus_tag="JN001_004249"
     CDS             675..>916
                     /gene="chbA"
                     /locus_tag="JN001_004249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS N,N'-diacetylchitobiose transporter subunit
                     IIA"
                     /protein_id="HAY9055231.1"
                     /translation="MMDLDNIPDTQTEAEELEEVVMGLIINSGQARSLAYAALKQAKQ
                     GDFAAAKAMMDQSRMALNEAHLVQTKLIEGDAGEGK"
BASE COUNT          221 a          224 c          252 g          219 t
ORIGIN      
        1 gttcttcggt attcatggcg cgctggcgct gaccgcactg gacaacggca ttatgacgct
       61 gtgggcgctg gaaaatatcg cgacctatca gcaatatggt tccgtcgaag cggcgctggc
      121 agccggtaag accttccata tctgggccaa gccgatgctg gactccttta ttttccttgg
      181 ggcagtggtg cgactttagg cctgatcctg gctatcttta tcgcctctcg ccgtgctgat
      241 tatcgtcagg tggcaaaact ggcgctgccg tccggcatct tccagattaa cgaaccgatt
      301 ctgtttggtc tgccaattat catgaacccg gtgatgttta tcccgtttgt actggtacaa
      361 ccgattctgg cggcaatcac cctcgcagcg tactacatgg gcattattcc tccggtgacc
      421 aatattgcac cgtggaccat gccaaccggt ctgggagcct tctttaacac caacggtagc
      481 gtcgctgcat tgctggtcgc actcttcaac cttggtatcg caacgttaat ttatctgccc
      541 tttgttgtgg tggctaacaa agcgcaaaac gcgattgata aagaagagag cgaagaagat
      601 atcgctaacg ccctgaaatt ttaatcgatg ccggtacggt taatcgtgcc ggtaagaaga
      661 gagaggaacg atgtatgatg gatctcgata acattcccga tacgcaaaca gaagctgaag
      721 agctggaaga agtggtgatg gggcttatca tcaactccgg acaagcgcgc agcctggcgt
      781 atgcggcact gaaacaggcg aagcagggcg attttgccgc agcaaaagcc atgatggatc
      841 agtcacggat ggcattgaat gaagcgcatc tggtacagac gaaactgatt gaaggcgatg
      901 cgggcgaagg taagat
//
LOCUS       DADMJE010000347          914 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.352, whole genome shotgun sequence.
ACCESSION   DADMJE010000347 DADMJE010000000
VERSION     DADMJE010000347.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 914)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 914)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..914
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.352"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>914
                     /gene="tuf"
                     /locus_tag="JN001_004250"
     CDS             <1..>914
                     /gene="tuf"
                     /locus_tag="JN001_004250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HAY9055232.1"
                     /translation="AHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHIL
                     LGRQVGVPYIIVFLNKCDMVDDEELLELVEMEVRELLSQYDFPGDDTPIVRGSALKAL
                     EGDAEWEAKILELAGFLDSYIPEPERAIDKPFLLPIEDVFSISGRGTVVTGRVERGII
                     KVGEEVEIVGIKETQKSTCTGVEMFRKLLDEGRAGENVGVLLRGIKREEIERGQVLAK
                     PGTIKPHTKFESEVYILSKDEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMP
                     GDNIKMVVTLIHPIAMDDGLRFAIREGGR"
BASE COUNT          212 a          230 c          264 g          208 t
ORIGIN      
        1 gcacacgtag actgcccggg gcacgccgac tatgttaaaa acatgatcac cggtgctgct
       61 cagatggacg gcgcgatcct ggtagttgct gcgactgacg gcccgatgcc gcagactcgt
      121 gagcacatcc tgctgggtcg tcaggtaggc gttccgtaca tcatcgtgtt cctgaacaaa
      181 tgcgacatgg ttgatgacga agagctgctg gaactggttg aaatggaagt tcgtgaactt
      241 ctgtctcagt acgacttccc gggcgacgac actccgatcg ttcgtggttc tgctctgaaa
      301 gcgctggaag gcgacgcaga gtgggaagcg aaaatcctgg aactggctgg cttcctggat
      361 tcttacattc cggaaccaga gcgtgcgatt gacaagccgt tcctgctgcc gatcgaagac
      421 gtattctcca tctccggtcg tggtaccgtt gttaccggtc gtgtagaacg cggtatcatc
      481 aaagttggtg aagaagttga aatcgttggt atcaaagaga ctcagaagtc tacctgtact
      541 ggcgttgaaa tgttccgcaa actgctggac gaaggccgtg ctggtgagaa cgtaggtgtt
      601 ctgctgcgtg gtatcaaacg tgaagaaatc gaacgtggtc aggtactggc taagccgggc
      661 accatcaagc cgcacaccaa gttcgaatct gaagtgtaca ttctgtccaa agatgaaggc
      721 ggccgtcata ctccgttctt caaaggctac cgtccgcagt tctacttccg tactactgac
      781 gtgactggta ccatcgaact gccggaaggc gtagagatgg taatgccggg cgacaacatc
      841 aaaatggttg ttaccctgat ccacccgatc gcgatggacg acggtctgcg tttcgcaatc
      901 cgtgaaggcg gccg
//
LOCUS       DADMJE010000348          913 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.353, whole genome shotgun sequence.
ACCESSION   DADMJE010000348 DADMJE010000000
VERSION     DADMJE010000348.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.353"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..185)
                     /locus_tag="JN001_004251"
     CDS             complement(<1..185)
                     /locus_tag="JN001_004251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HAY9055233.1"
                     /translation="MKSMDKISTGIAYGTSAGSAGYWFLQWLDQVSPSQWAAIGVLGS
                     LLLGLLTYLTNLYFKIR"
     gene            complement(478..552)
                     /locus_tag="JN001_004252"
     tRNA            complement(478..552)
                     /locus_tag="JN001_004252"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(517..519),aa:Gly,seq:tcc)
     gene            complement(556..631)
                     /locus_tag="JN001_004253"
     tRNA            complement(556..631)
                     /locus_tag="JN001_004253"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(596..598),aa:Thr,seq:tgt)
     gene            complement(634..710)
                     /locus_tag="JN001_004254"
     tRNA            complement(634..710)
                     /locus_tag="JN001_004254"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(674..676),aa:Arg,seq:tct)
     gene            complement(712..788)
                     /locus_tag="JN001_004255"
     tRNA            complement(712..788)
                     /locus_tag="JN001_004255"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(752..754),aa:Ile,seq:cat)
BASE COUNT          266 a          234 c          212 g          201 t
ORIGIN      
        1 tctcttattt tgaaatacag attcgtcaga taagtcagaa gccccagaag cagacttccc
       61 agcacaccaa tcgcagccca ctgtgatgga ctgacctgat ccaaccactg caaaaaccag
      121 tagccggcac tgccggcgga ggtgccgtag gcaatgcccg ttgaaatttt gtccatggat
      181 ttcatagcct cacctccgca aataacggat ggcgtagttt tacactgaga aatgaaaggg
      241 atttgaaaag aaaaaaacgc aaaagcgggc gaaacgatat atacagtaag gaaagcactc
      301 tatccaacaa accacccaca gttaatcgga ataaaagcag agtgcttatg aatgatcgca
      361 cgcccgaagg ttagtatttc tgcacagcaa ttttgcaaaa aaaggcgatc attcataact
      421 taaacgtctt tcagtcactc cgggatttcc catcatcgca gactgaaaga ctctgactgg
      481 agcgggcagc gggaatcgaa cccgcatcat cagcttggaa ggctgaggta atagccatta
      541 tacgatgccc gcatatggtg ccgactaccg gaatcgaact ggtgacctac tgattacaag
      601 tcagttgctc tgcctgctga gctaagtcgg cgctggccca ccaccgagga ctcgaacctc
      661 gcaccgtcaa cttagaaggt tgatgctcta tccggatgag ctagtggtgg ttggtggccc
      721 ttgctggact tgaaccagcg acctggcgat tatgagtcgc tcgctctgac caactgagct
      781 aaagggccgg aggcagaata ataaccatat gtcatcacat ctgcaaactc atctgaccac
      841 cagcacgttt aacgtcctgt gccgtttttc aggtataaaa aaacccgcat aaagcgggct
      901 ctttcaaatg tcc
//
LOCUS       DADMJE010000349          904 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.354, whole genome shotgun sequence.
ACCESSION   DADMJE010000349 DADMJE010000000
VERSION     DADMJE010000349.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 904)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 904)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..904
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.354"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>904
                     /locus_tag="JN001_004256"
     CDS             <1..>904
                     /locus_tag="JN001_004256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000878026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110-like element ISEc11 family transposase"
                     /protein_id="HAY9055234.1"
                     /translation="RRQDFLTFFGNREPCLIGMEACGGSQHWARELTKLGHKVRLLQA
                     RFVKAFVMGNKNDVMDARAIWMAVQQPGKEIAVKTEEQQSVLVLHRTRMQLVKFRTAQ
                     INALHGTLLEFGETIHKGRAAMEREFPEALERMKERLPPYLIMVLENQYNRLNELDSL
                     IEDIEKQLTSVARQNETCKRLLDIPGVGPLIATAAVATMGEASAFKSGREFAAYVGLV
                     PKQTGSGGKVRLLGISKRGDTYLRTLFIHGARAVALVAKEPGPWITELKKRRPASVAI
                     VAMANKLARTVWAITAHDRKYDRNH"
BASE COUNT          242 a          209 c          268 g          185 t
ORIGIN      
        1 gcgtagacag gattttctga cgttcttcgg caaccgtgag ccatgcctga ttggtatgga
       61 ggcctgtgga ggttctcagc actgggcacg ggaactgaca aaacttggtc ataaagtccg
      121 gttgttgcag gcccgcttcg ttaaggcatt cgtcatgggc aataagaatg atgtgatgga
      181 tgcccgggct atctggatgg cggttcagca gccgggtaaa gaaatcgccg taaaaacaga
      241 agaacagcag tcggtactgg ttctgcaccg tacccgcatg caactggtga agttccggac
      301 cgcacaaatt aatgccctgc acgggacgtt actggagttt ggtgaaacca tccacaaagg
      361 ccgggcagcg atggagcggg agttccccga agcactggaa cggatgaaag agagactgcc
      421 accgtatctc attatggttc tggaaaacca gtacaaccga ctgaatgagc tggactcact
      481 gatagaggat attgaaaaac agcttaccag cgtggcgagg cagaatgaaa cctgtaagcg
      541 gttgctggat attcctggcg ttggaccact tattgcgacg gcagcggtgg ccaccatggg
      601 ggaagcatca gcgtttaaat cggggcgaga gttcgccgca tatgttggtc tggttccaaa
      661 acaaactggc tccggaggga aagtacgtct gctggggata agcaaacgtg gtgacactta
      721 tctcaggaca ttatttatcc acggtgcaag agcggtggca ttagtagcta aagagcctgg
      781 cccgtggata accgaactga aaaaacgtcg tccagccagt gtggcaatcg tcgccatggc
      841 aaacaagctg gcacgaacag tatgggcgat aaccgcccat gaccgtaagt atgacaggaa
      901 ccac
//
LOCUS       DADMJE010000350          896 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.355, whole genome shotgun sequence.
ACCESSION   DADMJE010000350 DADMJE010000000
VERSION     DADMJE010000350.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 896)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 896)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..896
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.355"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>896
                     /locus_tag="JN001_004257"
     CDS             <1..>896
                     /locus_tag="JN001_004257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat protein"
                     /protein_id="HAY9055235.1"
                     /translation="EHADGSVTQSQFDAVGRLRTQTDAAGRTTEYSPDVVTGLITRIT
                     TPDGRASAFYYNHHSQLTSATGPDGLEIRREYDEWGRLIQETAPDGDIIRYRYDNPHS
                     DLPCATEDATGSRKTMTWSRYGQLLSFTDCSGYVTRYDHDRFGQMTAVHREEGLSQYR
                     AYDSRGQLIAVKDTQGHETRYEYNAAGDLTAVIAPDGSRNGTQYDAWGKAIRTTQGEL
                     TRSMEYDAAGRVIRLTSENGSHTTFRYDVLDRLIQETGFDGRTQRYHHDLTGKLIRSE
                     DEGLVTHWHYDEADRLTHRTVNG"
BASE COUNT          221 a          267 c          267 g          141 t
ORIGIN      
        1 gaacacgcgg acggcagcgt cacgcagagt cagtttgacg ccgtgggcag gctcaggaca
       61 cagacggatg ccgcaggccg gacaacagaa tacagcccgg atgtggtgac gggcctcatc
      121 acgcgcatca ccacgccgga tggcagggca tcggcgtttt actataacca ccacagccag
      181 ttaacgtcag ccaccgggcc tgacgggctg gaaatacgcc gggaatatga tgaatggggc
      241 cgtctgattc aggaaactgc ccctgacggc gatatcatcc gctaccgtta tgataatcca
      301 cacagtgact taccctgcgc aacggaagat gccaccggta gccggaaaac catgacgtgg
      361 agccgttacg gtcagttgct gagcttcacc gactgttccg gttatgtaac ccgttatgac
      421 catgaccgct tcgggcagat gacggcggtg caccgcgagg aagggctgag tcagtaccgc
      481 gcatacgaca gccgtggaca gttaattgcc gtgaaagaca cgcagggcca tgaaacgcgg
      541 tatgaataca acgccgccgg tgacctgacc gccgtcattg ccccggacgg cagcagaaac
      601 gggacacagt acgatgcgtg gggaaaggcc atccgtacca cgcagggcga gctgacgcgc
      661 agtatggaat acgatgctgc aggacgggtc atccgcctga ccagtgaaaa cggcagccac
      721 accaccttcc gttacgatgt actcgaccgg ctgatacagg aaaccggctt tgacggccgc
      781 acacagcgtt atcaccacga cctgaccggc aaacttatcc gcagcgagga tgaggggctg
      841 gtcacccact ggcactatga cgaagcagac cgcctcacgc accgcaccgt gaatgg
//
LOCUS       DADMJE010000351          865 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.356, whole genome shotgun sequence.
ACCESSION   DADMJE010000351 DADMJE010000000
VERSION     DADMJE010000351.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 865)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 865)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..865
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.356"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..360
                     /locus_tag="JN001_004258"
     CDS             <1..360
                     /locus_tag="JN001_004258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055236.1"
                     /translation="TPVALSANDPANVWGNLLPWPAHPATLVPTRRAGALVVVSSGKL
                     LLYLAQGGKKMLVWQEKEELLAPEVFHALTTALRREPRLRFTLTEVNDLPVRQTPMFT
                     LLREAGFSSSPQGLDWG"
     gene            complement(411..758)
                     /gene="grxD"
                     /locus_tag="JN001_004259"
     CDS             complement(411..758)
                     /gene="grxD"
                     /locus_tag="JN001_004259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="monothiol glutaredoxin 4"
                     /protein_id="HAY9055237.1"
                     /translation="MSTTIEKIQRQIAENPILLYMKGSPKLPSCGFSAQAVQALAACG
                     ERFAYVDILQNPDIRAELPKYANWPTFPQLWVDGELVGGCDIVIEMYQRGELQQLIKE
                     TAAKYKSEEPDAE"
BASE COUNT          187 a          227 c          233 g          218 t
ORIGIN      
        1 acaccagtgg cgctctctgc caacgatccg gctaatgtgt ggggaaatct tctgccctgg
       61 cctgcacatc cggcaacgct ggttccaacg cgtcgggcgg gtgcgctggt ggtcgtttct
      121 agcggcaaat tgttactcta tctggcgcaa ggtggcaaaa aaatgctggt ctggcaggaa
      181 aaagaggaat tactcgcccc agaggttttc cacgcgctga ctaccgcact gcgtcgcgaa
      241 ccacggctgc gctttacgct aacagaagtg aatgatctac cggtccggca aacgccgatg
      301 tttacgctgc tgcgtgaggc gggattttca agttcgccac aagggctgga ttggggatag
      361 agaaaggact gacggatgcc cgttcgcatc cgtcagtatt gcaggacgga ttattccgcg
      421 tccggctctt cagacttgta tttagcggca gtttctttga tcagctgctg cagttcgcca
      481 cgctgataca tttcgatcac gatatcacaa ccgccgacca gctcgccgtc aacccacagt
      541 tgcgggaagg tcggccagtt agcatatttc ggcagttccg cacgaatgtc cggattctgc
      601 agaatatcaa cataggcaaa acgttcgcca catgcggcaa gcgcctggac tgcctgggca
      661 gagaaaccgc agctcggcag tttcggtgaa cctttcatgt acagcaggat cgggttttca
      721 gcaatctggc gttggatttt ttcgatagtg gtgctcattg tcttgcttcc tcaaacttct
      781 ttacggcagt aatctgacat tgtagcgggt cagtgcggca tcggaaaata acattttcat
      841 cacgcttttg ctattttatc ccttt
//
LOCUS       DADMJE010000352          825 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.357, whole genome shotgun sequence.
ACCESSION   DADMJE010000352 DADMJE010000000
VERSION     DADMJE010000352.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 825)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 825)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..825
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.357"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            9..800
                     /gene="fdrA"
                     /locus_tag="JN001_004260"
                     /pseudo
     CDS             9..800
                     /gene="fdrA"
                     /locus_tag="JN001_004260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308607.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase FdrA"
BASE COUNT          198 a          192 c          253 g          182 t
ORIGIN      
        1 gagttgttat gatccacgcc tttattaaaa aagggtgttt tcaggattcg gtcagtttaa
       61 tgattatttc acgaaaactc agcgaatcag aaaatgttga tgatgtttcc gtaatgatgg
      121 gtacgcccgc caataaagcg ttattagata ccacaggttt ctggcatgac gattttaata
      181 acgccacgcc gaacgatatt tgcgtggcaa ttcgtagcga agcggcggat gcggggatcg
      241 cgcaggcgat tatgcagcag cttgaagagg cgctaaaaca actggcgcag ggggcaggca
      301 gcagccagtc cttgacgcag gtgcgtcgct gggacagtgc ctgtcagaaa ttatccgatg
      361 ccaatctggc gctgatttca gtggctggcg agtatgcggc ggagctggcg aatcaggcgc
      421 tggagcgcaa cctcaacgtg atgatgttct ccgataacgt cacgctggaa gatgaaatcc
      481 aacttaaaac ccgcgcgcga gaaaaaggct tgctggtgat ggggccggac tgcggtacgt
      541 cgatgattgc cggcacgccg ctggcttttg ctaacgtgat gccggaaggc aacattggcg
      601 tcattggcgc ttccggtacc gggattcagg aactgtgttc gcagattgcg caggcagggg
      661 agggaattac tcacgcgatt ggtcttggcg agcgcgacct cagccgtgaa gtaggcggca
      721 tcagtgcgct gacggcgctg gaaatgctca gtgcagacga gaaaagcgaa gtgctggcat
      781 ttgtttcaaa gccacctgcc tagactggcc ccctgaatct ccaga
//
LOCUS       DADMJE010000353          819 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.358, whole genome shotgun sequence.
ACCESSION   DADMJE010000353 DADMJE010000000
VERSION     DADMJE010000353.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 819)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 819)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..819
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.358"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            121..>819
                     /locus_tag="JN001_004261"
     CDS             121..>819
                     /locus_tag="JN001_004261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055238.1"
                     /translation="MLPSISINNTSATYPESINENNNDEVNGLVQELKNLFNGKEGIS
                     TCIKHLLELIKNAIRVNDDPYRFNINNSSVTYIDIGSNDTDHITIGIDNQEPIELPAN
                     YKDKELVRTIINDNIVEKTHDINNKEMIFSALKEIYDGAPSFIFDKISHKLRHTVTEF
                     DESGKSEPTDLFTWYGKDKKGDSLAIVIKNKNGNDYLSLGYYDQDDYHIQRGIRINGD
                     SLTQYCSENARSASA"
BASE COUNT          313 a          146 c          135 g          225 t
ORIGIN      
        1 gctattgtgc gctcatacac tcaaattaaa gataggttct aaataaatga gcgttttttg
       61 atagtctatt tcattaggta atatatattt gtaacaaatc aatcaaaatg gaataaaatc
      121 atgctaccat ctatttcaat caacaatacc agcgcaactt acccagaatc cattaatgaa
      181 aataacaatg atgaagttaa tggattagta caagagctca aaaacctttt taatggtaag
      241 gaaggaataa gcacctgtat taaacatcta cttgagctta taaaaaacgc catacgagta
      301 aacgacgatc cttatagatt taatattaat aattcctcag ttacttatat tgatattggc
      361 tccaatgata cagaccatat tactattggt atcgacaacc aagaaccaat agaattacct
      421 gcgaactata aagacaaaga actcgtccgt actatcatta atgacaacat agttgagaag
      481 actcatgata tcaataacaa ggaaatgatc ttcagcgcat taaaagaaat atatgatgga
      541 gctcctagtt ttatcttcga taagatatca cacaaactca gacatacggt aacggaattt
      601 gatgagagcg ggaaaagcga accaacggac ttatttacct ggtacggtaa agataaaaaa
      661 ggcgactctc tcgctattgt aattaaaaat aaaaacggaa atgattactt atccctcggt
      721 tactacgatc aggacgacta ccacattcaa agaggaattc gtattaatgg tgatagtctc
      781 acccaatatt gtagtgaaaa cgccaggagt gcttcagcg
//
LOCUS       DADMJE010000354          812 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.359, whole genome shotgun sequence.
ACCESSION   DADMJE010000354 DADMJE010000000
VERSION     DADMJE010000354.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 812)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 812)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..812
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.359"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..347
                     /locus_tag="JN001_004262"
     CDS             <1..347
                     /locus_tag="JN001_004262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001613027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055239.1"
                     /translation="VMCLTKPAFSYYIAAYLKLFIENYYEADALVDTILNMLTPPVRN
                     GIPSTTWIAKNLDCFSRNKRVAISFTFQYLCNEYNDPNTEKALNIYWGQYLNESLLIK
                     NVQNSKNKCKSQ"
     gene            complement(408..593)
                     /locus_tag="JN001_004263"
     CDS             complement(408..593)
                     /locus_tag="JN001_004263"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055240.1"
                     /translation="MIMVAVAAAVTDALLVFFRQLAPFVVLPALGIFIIHGTVRQAVG
                     FIVMPERDQALMSLTVI"
     gene            592..795
                     /locus_tag="JN001_004264"
     CDS             592..795
                     /locus_tag="JN001_004264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000977355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type IV secretion protein Rhs"
                     /protein_id="HAY9055241.1"
                     /translation="MMKNQMEPEYTPLRKIHLYHCDHRGLPLALIRSDGRTGWRVEYD
                     EWGNLLSEDNPHRERSSEVHFLY"
BASE COUNT          251 a          170 c          188 g          203 t
ORIGIN      
        1 ctgtcatgtg tctcactaaa ccagcattct catattatat tgcagcctat ttaaaacttt
       61 ttattgaaaa ttattacgaa gctgatgctt tagtggatac tattttaaat atgctcactc
      121 ctcctgttag gaatggtatc cccagcacta catggatagc aaaaaatctt gattgcttta
      181 gtcgtaataa aagggtggct atttctttta cattccaata tttatgtaat gaatataatg
      241 atccaaatac tgaaaaggcg ttaaatatat attggggaca gtatctgaat gaatcattgc
      301 ttattaaaaa tgtacagaac tctaaaaata aatgtaaatc acagtaagac agaaccaagc
      361 agaaatcgtg ggcgtggttc gcaccctgac ggagggtgta gcgtgtacta gatcacagtg
      421 agcgacatca aagcttggtc acgttctggc attacgatga agccgaccgc ctgacgcacc
      481 gtaccgtgaa tgatgaagat gccgagtgct ggcagtacaa cgaacggggc tagctgacgg
      541 aaaaagacga gcagcgcatc cgtgacggcg gcagccacag ccaccattat catgatgaaa
      601 aaccagatgg agccggaata cacgccgctg cgtaaaattc acctgtacca ctgcgaccac
      661 cggggactgc cgctggcgct gatacgcagt gacggccgaa ccggatggcg tgtagagtat
      721 gacgaatggg gcaacctgct gagtgaggat aacccgcaca gggaaagatc atcagaagtt
      781 cactttttgt actaaataat tcgcatttta tg
//
LOCUS       DADMJE010000355          771 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.360, whole genome shotgun sequence.
ACCESSION   DADMJE010000355 DADMJE010000000
VERSION     DADMJE010000355.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 771)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 771)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..771
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.360"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..771
                     /locus_tag="JN001_004265"
                     /pseudo
     CDS             1..771
                     /locus_tag="JN001_004265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          173 a          184 c          240 g          174 t
ORIGIN      
        1 agggcgattc gtatggttct ggaaagtcag ggcgaatatg actcacagtg ggcggcaatt
       61 tgttccattg ccccaaagat tggctgtaca ccggagactc tgcgtgtctg ggtacgccag
      121 catgagcggg ataccggagg cggtgatggc gggctcacca ccgctgaacg tcagcgtctg
      181 aaagagctgg aacgtgaaaa tcgtgaactg cgccgcagta acgatatcct tcgccaggct
      241 tccgcttatt ttgcgaaggc ggagttcgac cgcctctgga aaaagtgatg ccactgctgg
      301 ataagctgcg taagctgtac ggggtcggac cggtatgcag tgaactacat attgccccgt
      361 caacgtatta ccactgtcag caacagcgac atcatcctga taaacgcagt gcccgtgcgc
      421 agcgcgatga ctggctgaag aaagagatac tgcgcgtata cgatgggaat catcaggtat
      481 acggtgtgcg taaagtctgg cgtcagttgt tacgggaagg tatcagagtg gccagatgca
      541 ctgtggcacg tctcatggcg gttatgggac ttgccggtgt tctccggggt aaaaaggtcc
      601 gtacgaccat cagccggaaa gccgttgccg caggcgaccg cgtaaaccgt cagttcgtgg
      661 cagaacgacc tgaccagctg tgggtggctg attttactta cgtcagcaca tggcagggct
      721 tcgtctatgt ggcgttcatt attgatgtgt ttgccggata catcgtgggg t
//
LOCUS       DADMJE010000356          761 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.361, whole genome shotgun sequence.
ACCESSION   DADMJE010000356 DADMJE010000000
VERSION     DADMJE010000356.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 761)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 761)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..761
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.361"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..>761)
                     /locus_tag="JN001_004266"
     CDS             complement(<1..>761)
                     /locus_tag="JN001_004266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000015400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS Repeat family protein"
                     /protein_id="HAY9055242.1"
                     /translation="HRLAALWQALPEELRLSPHRYLATNSPQGPWWLLGWCERVPEAD
                     EVLPAPLPPYRVLTGLVDRFGRTQTFHREAAGEFSGEITGVTDGAGRHFQLVLTTQAQ
                     RAEEARQQAISGGTEPSAFPDTLPGYTEYGRDNGIRLSAVWLTHDPEYPENLPAAPLV
                     RYGWTPRGELAAVYDRSNTQVRSFTYDDKYRGRMVAHRHTGRPEIRYRYDSDGRVTEQ
                     LNPAGLSYTYQYEKDRITITDSLNRREVLHTQGEAG"
BASE COUNT          122 a          254 c          235 g          150 t
ORIGIN      
        1 ccggcttcac cctgcgtgtg cagcacttca cggcggttca ggctgtcggt gatggtgatg
       61 cggtccttct catactgata cgtgtagctt aagcctgccg ggttaagctg ttctgtcacc
      121 cgcccgtcgc tgtcgtaacg gtaacggatt tccggccggc ccgtgtgacg gtgcgccacc
      181 atccggcccc ggtatttatc atcgtaagta aagctacgca cctgtgtatt gctgcggtca
      241 tacactgccg ccagttcgcc gcgcggcgtc cagccatagc gcaccagcgg cgcggcaggt
      301 aaattctccg ggtattccgg gtcgtgcgtc agccacacgg cagacagacg gatgccgttg
      361 tcccggccat attcggtgta acccggcagg gtatcaggaa aagcggacgg ttccgtcccg
      421 ccggaaatgg cctgctgccg ggcttcttct gcccgctgcg cctgcgtggt cagtaccagt
      481 tggaagtgac gcccggcacc atccgtcacg ccggtgattt cgccgctgaa ttcaccggcg
      541 gcttcgcggt ggaacgtctg tgtgcgcccg aagcggtcca ccagcccggt cagtacccgg
      601 tacggcggca gcggcgcagg cagcacctca tccgcttccg gcacccgctc acaccagccg
      661 agcagccacc acggcccctg cggactgttt gtcgccagat aacgatgcgg acttaagcgg
      721 agttcttccg gcagcgcctg ccagagtgcg gccagccggt g
//
LOCUS       DADMJE010000357          731 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.362, whole genome shotgun sequence.
ACCESSION   DADMJE010000357 DADMJE010000000
VERSION     DADMJE010000357.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..731
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.362"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            109..>731
                     /locus_tag="JN001_004267"
     CDS             109..>731
                     /locus_tag="JN001_004267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001063816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS110-like element ISSso6 family transposase"
                     /protein_id="HAY9055243.1"
                     /translation="MNNNNTLYVGLDVHKESITVAYAINSEPVELMGKIGTSPTDIQN
                     LCKRLRSKSSQVSIVYEAGPCGYGLYRRLVKSGFDCMVCAPSLIPKKPGERVKTDRRD
                     AIRLVRSLRAGDLSAVYVPGIEDEAFRDLARAWASARDDLRHARQRLKSFLLVHGVHY
                     VGRADWGPAHRRWLSKYSFESPWRQLAFDEHRRTIEDRQAQCERLESA"
BASE COUNT          176 a          178 c          196 g          181 t
ORIGIN      
        1 gagacagatg ctggccaacg tgggatattt aacgcgggtt aacatcgttg tcagagccgc
       61 atgggtgagc tgttgctaca ccccggtatt tccaccacgg aggccagcat gaacaacaat
      121 aacacattgt acgtcgggtt agatgttcac aaagaatcga ttactgtcgc ttatgctatc
      181 aattcagaac ctgttgaact gatgggtaaa attggcacat cacctactga tattcagaat
      241 ctttgtaaac gtctcaggtc aaagtcatcg caggtcagta tcgtttatga agcggggccc
      301 tgtggttatg gactttatcg tcggctggtg aaatccggtt ttgactgcat ggtctgcgcc
      361 ccctcactta tcccgaaaaa accgggggag cgggttaaaa ccgatcgccg tgatgccatc
      421 agacttgtgc gttcactgcg tgcaggagat ctttctgctg tctacgtacc cggcattgaa
      481 gatgaggcat tccgggattt ggcccgggca tgggcatctg cccgcgatga tttacggcat
      541 gcaaggcaac gtctgaaatc gtttcttctg gttcatgggg tccattatgt cgggcgagca
      601 gattggggcc ctgcacaccg acgctggctc agcaaatact cattcgaaag tccctggcga
      661 caattagctt ttgacgaaca ccgtcgtaca atagaagacc ggcaggcaca atgtgaacgg
      721 ctggaatccg c
//
LOCUS       DADMJE010000358          728 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.363, whole genome shotgun sequence.
ACCESSION   DADMJE010000358 DADMJE010000000
VERSION     DADMJE010000358.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 728)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 728)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..728
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.363"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>728
                     /locus_tag="JN001_004268"
     CDS             <1..>728
                     /locus_tag="JN001_004268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012904571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY9055244.1"
                     /translation="TARLWVYVRDDRNAGSQMPPAVWFAYSPDRKGIHPQNHLAGYSG
                     VLQADAYGGYRALYESGRITEAACMAHARRKIHDVHARVPTDITTEALQRIGELYTIE
                     AEVRGCSAEQRLAARKARAAPLMQSLYDRIQQQMKTLSRHSDTAKAFAYLLKQWKALN
                     VYCSNGWVEIDNNIAENALRGVAVGRKNWLFAGSDSGGEHAVVLYSLIGTCRLNNVEP
                     EKWLRYVIEHLQDWPANRVRDLLP"
BASE COUNT          182 a          192 c          218 g          136 t
ORIGIN      
        1 aactgcccgg ctgtgggtct atgtccgtga tgaccgtaac gccggttcac agatgccccc
       61 ggcggtctgg ttcgcgtaca gcccggaccg gaaaggtatc catccacaga atcacctggc
      121 tggttacagc ggtgtgcttc aggcagatgc ttacggtggt taccgggcgt tatacgaatc
      181 cggcagaata acggaagccg cgtgtatggc ccatgcccgg agaaaaatcc acgatgtgca
      241 tgcaagagtg ccaaccgaca tcaccacgga agccctgcag cgtatcggtg aactgtatac
      301 catcgaggca gaagtccggg gatgttcagc agaacagcgt ctggcggcaa gaaaagcaag
      361 agccgcgcca ctgatgcagt cactgtatga ccggatacag caacagatga aaacactgtc
      421 gcgtcactcg gatacggcaa aagcgttcgc atacctactg aaacagtgga aggccctgaa
      481 cgtgtactgc agtaatggct gggtggaaat cgacaacaac atcgcagaga acgccttacg
      541 gggagtggcc gtaggccgga aaaactggct cttcgcgggt tccgacagcg gtggcgaaca
      601 tgcggtggtg ttgtactcgc tgatcggcac atgccgtctg aacaatgtag agccagaaaa
      661 atggctgcgt tacgttattg agcatctcca ggactggccg gcaaaccggg tacgcgatct
      721 gttgccct
//
LOCUS       DADMJE010000359          726 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.364, whole genome shotgun sequence.
ACCESSION   DADMJE010000359 DADMJE010000000
VERSION     DADMJE010000359.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 726)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 726)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..726
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.364"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            35..726
                     /locus_tag="JN001_004269"
                     /pseudo
     CDS             35..726
                     /locus_tag="JN001_004269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612230.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS1 family transposase"
BASE COUNT          170 a          181 c          200 g          175 t
ORIGIN      
        1 atttagtgta tgatggtgat tttaaggtgc ttgcgtggct tccatttcca tcagatgtcc
       61 ttcctgctcc gctactgaag gcgtggtgcg taacggcaaa agcactgccg gacatcagcg
      121 ctatctctgc tctcattgcc gtaaaacatg gcaactacag ttcacttaca ccgcctctca
      181 gcccggtacg caccagaaaa tcattgatat ggccatgaat ggcgtcggat gtcgcgccag
      241 tgcacgcatt atgggcgttg gcctcaacac ggttttacgt cacttaaaaa actcaggccg
      301 cagtcggtaa cctcgcgcat acaaccgggc agtgatgtga ttgtctgcgc tgaaatggac
      361 gaacagtggg gctacgtcgg tgctaaatca cgtcagcgct ggctgtttta cgcgtatgac
      421 aggatacgga ggacggttgt ggcgcacgtc ttcggtgaac gcactctggc cacactggag
      481 cgtcttctga gcctgctgtc ggcctttgag gtcgtggtat ggatgacgga tggctggccg
      541 ctgtatgaat cacgcctgaa gggaaagctg cacgttatca gcaagcgtta cactcagcgc
      601 attgagcgac ataatctgaa tctgagacaa catctggcaa ggctgggacg gaagtcactg
      661 tcgttctcaa aatcggtgga gctgcatgac aaggtcatcg ggcattatct gaacataaaa
      721 cactat
//
LOCUS       DADMJE010000360          719 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.365, whole genome shotgun sequence.
ACCESSION   DADMJE010000360 DADMJE010000000
VERSION     DADMJE010000360.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 719)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 719)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..719
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.365"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            240..509
                     /locus_tag="JN001_004270"
     CDS             240..509
                     /locus_tag="JN001_004270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000079945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055245.1"
                     /translation="MAQVNMSVRIDAELKDAFMAAAKSMDRNGSQLIRDFMRQTVERQ
                     HNSWFRDQVAAGRQQLECGDVLPHDMVESSAAAWRDEMSRKIADK"
     gene            506..633
                     /locus_tag="JN001_004271"
                     /pseudo
     CDS             506..633
                     /locus_tag="JN001_004271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001553778.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system RelE/ParE family
                     toxin"
BASE COUNT          186 a          168 c          202 g          163 t
ORIGIN      
        1 ctgaaaacgg ctcacaactg caccattcat aatcacatcg cataaaactg tcagcgccag
       61 tgataggaca ggtgaaacct gtcaatacgt accggcttac gccgggcttc ggcggtttta
      121 ctcctctgcc atatgcaaca acggagtgcc gccttacatg ccgctggcgc ggcatatcct
      181 ggtgacgata tctgaacagt tatatactgt gtatatacgt ggtaatgacg aggtggcaaa
      241 tggcacaggt taatatgagt gtaagaatcg acgcagaact gaaggatgct tttatggccg
      301 ctgcaaaaag catggaccgt aatggctctc agttaatccg ggattttatg cgccagaccg
      361 ttgaacggca gcacaattct tggttccgtg accaggttgc ggcaggccgt cagcaactcg
      421 aatgcggtga tgtgcttccc catgacatgg tcgaatcctc tgctgctgca tggcgggatg
      481 aaatgagcag gaagattgct gataaatgat ggagatgttc tggaccatgc tggccatcca
      541 ggacaggaag cgcattcgta gtacattgcg gagcagaacc tgatggccgc cattgaaccg
      601 gacgaacgga ttggttattc agccagcagc ctggcagggc agccgtataa aggccgcaac
      661 ggtcgtgtgg aaggaacatc tggaccacac aaggtagcgt gtaacgttat tttgtgtga
//
LOCUS       DADMJE010000361          711 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.366, whole genome shotgun sequence.
ACCESSION   DADMJE010000361 DADMJE010000000
VERSION     DADMJE010000361.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..711
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.366"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            17..>711
                     /locus_tag="JN001_004272"
     CDS             17..>711
                     /locus_tag="JN001_004272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005105549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="E3 ubiquitin--protein ligase"
                     /protein_id="HAY9055246.1"
                     /translation="MLPVNNPPLSTGNVSFYRTTSIDNVHNNYLSEWVEWTKNSISGE
                     NRETAFTRLQLCLENSETSLDLSCLGLRSLPRLPDNLDEINVSNNQLSMLPELPRALK
                     ELNASSNQLSALPELPVSLEYINVSDNHLFALPELPASLEYINVSDNHLSVLPRLPMS
                     LELLDAARNALEVIPDFPERDDHIIRIFWLNQNRITAIPESILGLSSDSVVNLRENQL
                     SPRIMQTLLQQTA"
BASE COUNT          227 a          157 c          125 g          202 t
ORIGIN      
        1 cttctgcgag gttattatgc ttcctgtaaa taatcccccc ctatccactg gaaacgtctc
       61 tttttacaga actacatcaa tcgacaatgt tcacaataat tatctctccg aatgggttga
      121 atggactaaa aacagcattt ccggagaaaa cagggaaact gcttttaccc ggctccaatt
      181 atgtctggaa aacagtgaaa catcgttgga cttatcttgt ttaggtctca gatctctacc
      241 acgattgcct gacaatcttg atgaaattaa tgtaagcaat aaccaactat caatgctccc
      301 cgagctacca agggcattga aagaactgaa tgcaagcagt aatcaattat ctgcacttcc
      361 tgaattacca gtgtcgctgg aatatataaa tgtgagtgat aaccatttgt tcgcacttcc
      421 tgaattacct gcgtcactag aatatattaa cgtaagtgac aatcacctgt ctgtacttcc
      481 gaggttacca atgtcattgg aattacttga tgcagccaga aatgctttgg aagtaatacc
      541 agattttcca gaaagagatg atcatattat aagaatattc tggcttaatc agaaccggat
      601 cacggcaatt ccggaaagca tacttggcct cagttctgat agcgttgtca atcttagaga
      661 aaatcaacta tctcccagaa taatgcaaac tttgttacaa caaaccgccc a
//
LOCUS       DADMJE010000362          685 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.367, whole genome shotgun sequence.
ACCESSION   DADMJE010000362 DADMJE010000000
VERSION     DADMJE010000362.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 685)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 685)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..685
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.367"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            201..389
                     /locus_tag="JN001_004273"
     CDS             201..389
                     /locus_tag="JN001_004273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_309958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1187 family protein"
                     /protein_id="HAY9055247.1"
                     /translation="MYKITATIEKEGGSPASWTRYSKTKLTKSECEKMLSGEKEAGVS
                     REQKVKLINFNCEKLQSS"
     gene            509..655
                     /locus_tag="JN001_004274"
     CDS             509..655
                     /locus_tag="JN001_004274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001377407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excisionase XisR"
                     /protein_id="HAY9055248.1"
                     /translation="MVEYGLMLRTGLGARQIEAYRQNCWVEGFHFKRVSPLGKPDSKR
                     GIIW"
BASE COUNT          234 a          127 c          162 g          162 t
ORIGIN      
        1 cccgctcatg ggaaagaatc aaaggtatgg actggccgac aatcaaagct ggtcgtaatg
       61 cactatggat tgaactggaa ggcgttgaat atgcattccc ggatccacaa acacaaaacg
      121 aaacgcaaca agcaggatac gatgagaata ttccggtgta aaaccaagtg cattttggga
      181 aaatattaat ggaggtgttc atgtataaaa ttacagccac tattgaaaag gaaggtggtt
      241 ctcctgccag ctggacaaga tactcaaaga caaaactaac gaaatcagaa tgcgaaaaaa
      301 tgctctcagg ggaaaaagaa gctggcgttt ccagagagca gaaagtaaaa ttgataaatt
      361 ttaattgcga gaaacttcag tcctcgtgaa ttgcattgta ttcaaattaa aacttcatag
      421 ctgattatta ataatcaaca tcgggcgtca atttcagcct aacattggcg cctgccagag
      481 gtgatgcgat ggctttaatg aagagtggat ggttgaatac ggcctgatgc ttcgcactgg
      541 tctgggtgcc agacaaattg aagcataccg ccagaactgt tgggtggaag gcttccactt
      601 caaacgagta tctcctttag ggaagccaga cagtaagcga gggattatct ggtaaaacta
      661 tccgaagata aatcagttta tcaaa
//
LOCUS       DADMJE010000363          663 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.368, whole genome shotgun sequence.
ACCESSION   DADMJE010000363 DADMJE010000000
VERSION     DADMJE010000363.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 663)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 663)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..663
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.368"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(32..304)
                     /locus_tag="JN001_004275"
     CDS             complement(32..304)
                     /locus_tag="JN001_004275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055249.1"
                     /translation="MELQLSDKGVIKMKAIQCCYFLALVSSNLMAGVMGNDNIFLSNS
                     DSAALYCVAKIFPDGENILIYKVNIINASSKKDVFFMKAQHQPTMT"
     gene            complement(270..663)
                     /locus_tag="JN001_004276"
                     /pseudo
     CDS             complement(270..663)
                     /locus_tag="JN001_004276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312891.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4329 domain-containing protein"
BASE COUNT          194 a          129 c           81 g          259 t
ORIGIN      
        1 ttcataggca tatgacattc ccccgccccc attatgtcat tgtgggttga tgttgggctt
       61 tcataaaaaa aacatctttt tttgaactag cattaattat atttacttta tatattaaaa
      121 tattttctcc atctggaaat attttagcca cacaatataa agcagctgaa tccgaattac
      181 ttaaaaatat attatcatta cccataactc cagccattaa attactggag actaaagcaa
      241 ggaaataaca acattgtatt gccttcattt taattactcc cttgtctgat aattgtaact
      301 ccattccctt tagctttggg attatatttt agataggtgt tatttggtgt tcccaagtaa
      361 ctgcttgtat tctttttttc ccattccatt catataagaa ttcgttaaat ctttgcttga
      421 aaaatttaga ctatcataaa catcattttc ttttgttact ttatttcctt tatcgtcaga
      481 gtaaaaaccg tgagtgtgat aatcgcctac tctctctgaa ccttcagggc attttatatt
      541 tcgcaagtct acactatcat tatcatttga acttatcgga ttcatgggga aatattcacc
      601 ttgcttctta catattagtc caccatattc tttattctcg ttaattgatt ctccattaca
      661 cat
//
LOCUS       DADMJE010000364          657 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.369, whole genome shotgun sequence.
ACCESSION   DADMJE010000364 DADMJE010000000
VERSION     DADMJE010000364.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..657
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.369"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(65..595)
                     /locus_tag="JN001_004277"
     CDS             complement(65..595)
                     /locus_tag="JN001_004277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HAY9055250.1"
                     /translation="MSITGVNIGRLFREGFSNYDPIGALNAMASQRTKEARGGELQIN
                     ELLPASLDAAKAHGLTERDVYEATDYYKTPRGQQPGGATKMLFSHAQKTLAWDAFAFT
                     EVLLTQPVMVVVGEKVGAFGAYRDGLEVYGRAMVSQDRQLVSLPDFSHYELYDKPEAV
                     QEALEKVIPFFNPHLG"
BASE COUNT          166 a          177 c          137 g          177 t
ORIGIN      
        1 tggcgggcta tctgaccgcc agcaccaaga atcagtacat ttttcataat atttctcatg
       61 aaacttatcc cagatggggg ttgaaaaaag gaataacttt ttccagcgcc tcctgaactg
      121 cttccggttt gtcatacagt tcataatgtg agaaatcggg taatgaaact aactgacgat
      181 cctgcgaaac catcgcccgg ccatagactt ccagtccatc acgataagca ccgaaggcac
      241 cgactttttc accaacgact accatcaccg gctgagtcag taacacttca gtaaatgcga
      301 aggcatccca ggccagcgtt ttctgtgcat gtgagaacaa catttttgtc gcacctcccg
      361 gttgttgccc gcgtggtgtt ttatagtagt cagttgcttc ataaacatcg cgttcggtca
      421 gtccatgggc ttttgctgca tccaggctgg cgggaagtaa ttcgttgatc tgtaattctc
      481 caccacgagc ctctttggtt cgttgcgacg ccattgcatt caatgcgcca atcggatcgt
      541 aattgctgaa accttcccga aaaagacgcc cgatattaac acccgtaata ctcactactg
      601 ctttaattcg tttttctgtc agcgcggcat taatggcata gtcaccaccc ccacaca
//
LOCUS       DADMJE010000365          656 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.370, whole genome shotgun sequence.
ACCESSION   DADMJE010000365 DADMJE010000000
VERSION     DADMJE010000365.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..656
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.370"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            215..574
                     /locus_tag="JN001_004278"
     CDS             215..574
                     /locus_tag="JN001_004278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001331208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1889 family protein"
                     /protein_id="HAY9055251.1"
                     /translation="MQIKVIYSLIDNMVNFKDKNMPAVIDKALDFIGAMDVSAPTPSS
                     MNESTAKGIFKYLKELGVPASAADITARADQEGWNPGFTEKMVGWAKKMEFGERTVIK
                     NPEYFSTYMQEELKALV"
BASE COUNT          211 a          127 c          131 g          187 t
ORIGIN      
        1 aactatataa ataaacataa ccatgccgtt gtgttcgccc ttcgattagc acctctggtt
       61 ttctttctta gctgaacaat ctggttatag cgtgcggact gaccgttaat tttctccatc
      121 ttactggata acacaccatg agctgctacc tttaaaacac ctgaatgtca acaggttaac
      181 tcgtgccata tcgttataat ccctttgata ttagatgcaa attaaggtca tatatagcct
      241 tatcgataac atggttaatt ttaaggataa gaatatgcct gctgtaatag ataaagccct
      301 ggatttcatt ggtgccatgg atgtatcagc gccaacacca agttcgatga atgaaagcac
      361 agcgaaggga atctttaaat atttaaaaga actgggagta cccgcgagtg ccgctgatat
      421 tacggcgcga gctgaccagg aaggctggaa ccctgggttc acggaaaaaa tggttggatg
      481 ggcaaaaaaa atggagtttg gtgaacgcac tgtaattaaa aatcctgaat acttttcaac
      541 atatatgcag gaagaactaa aagcactggt ctgagtttaa tttatatcag cataaatggg
      601 tcaggacgct tttaatcaca tataaaaagc gtcctttttc tcacaatcaa ataatc
//
LOCUS       DADMJE010000366          631 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.371, whole genome shotgun sequence.
ACCESSION   DADMJE010000366 DADMJE010000000
VERSION     DADMJE010000366.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.371"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            106..>631
                     /locus_tag="JN001_004279"
     CDS             106..>631
                     /locus_tag="JN001_004279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001395480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS630-like element IS630 family transposase"
                     /protein_id="HAY9055252.1"
                     /translation="MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVS
                     DVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRARRWPFEHICTLLRELVKHSPGD
                     FGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
                     MAAIHKALDECSAEH"
BASE COUNT          162 a          170 c          167 g          132 t
ORIGIN      
        1 cctaaatagc tgcgcggaat agtagatccc tttgagggaa cttagcccgg attgtgcgat
       61 ctgatcaatc gccaaatcaa aacaaatcac caaccggact gagcaatgcc gatcatagca
      121 ccaatttccc gtgacgaacg acgcctgatg cagaaagcca tccataaaac acacgataaa
      181 aattatgccc gcagactgac tgccatgctg atgctgcacc ggggcgaccg tgtcagcgac
      241 gttgccagaa cgctctgctg cgcccgttcc tctgttggac gctggattaa ctggttcacg
      301 cagtcgggtg ttgagggact gaaatcatta cctgccgggc gtgcccgtcg ctggccgttt
      361 gagcatatct gcacactgtt acgtgagctg gtaaaacatt ctcccggcga ctttggctac
      421 cagcgttcac gctggagtac agaactgctg gcaataaaaa tcaatgagat aaccggttgc
      481 cagttaaatg ccggaaccgt tcgccgctgg ttgccgtctg cggggattgt gtggcgaagg
      541 gctgcgccaa ctctgcgtat ccgtgacccg cataaagatg aaaagatggc agcaatccat
      601 aaagcactgg acgaatgcag cgcagagcat c
//
LOCUS       DADMJE010000367          626 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.372, whole genome shotgun sequence.
ACCESSION   DADMJE010000367 DADMJE010000000
VERSION     DADMJE010000367.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 626)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 626)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..626
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.372"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            2..238
                     /locus_tag="JN001_004280"
     CDS             2..238
                     /locus_tag="JN001_004280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000896126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF417 family protein"
                     /protein_id="HAY9055253.1"
                     /translation="MAFTTPLVTLSFLITTPEAWVSALGDAHYGFPYLSGAGRLVLKD
                     TLMLAGAVMIMADSAREILKQRSNESSSTLKTEY"
     gene            complement(398..>626)
                     /locus_tag="JN001_004281"
     CDS             complement(398..>626)
                     /locus_tag="JN001_004281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308365.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HAY9055254.1"
                     /translation="ISQVILRWNIQRGVVVIPKSTHQQRIEENFAIWDFSLTEKEMAQ
                     ISSLDLGYVGESVKHFNPEFVRGCLAVKIHD"
BASE COUNT          181 a          140 c          122 g          183 t
ORIGIN      
        1 gatggcattt accacgccgc tggtaacact ctcattttta atcaccaccc cggaggcatg
       61 ggtatccgca ttgggtgacg ctcattatgg tttcccttat ttatccggtg ctggtcgctt
      121 ggtattgaaa gatactctga tgctggcagg tgctgtcatg ataatggcag attcggcgcg
      181 ggaaattctt aaacaacgca gtaatgaatc cagttcaacg ttaaaaactg aatattgata
      241 atccgaacac tgtctgttgt tcactttttc aggcgtcagg ccccctttct gatgatgaag
      301 actgacgcca tattaccgga gatatgacag agtgaagatc aatatcactc ccctgttaaa
      361 agattcttgt cgtctcaggt aaaatatatg attaatatca atcatgtatt tttacagcaa
      421 gacaaccacg aacaaattca ggattaaaat gttttaccga ctccccaaca taacccaaat
      481 caagcgaact aatttgtgcc atttctttct ctgtcagtga gaaatcccag atagcaaaat
      541 tttcttcgat acgctgttga tgtgtcgatt tcggaataac gaccactccc cgttgaatat
      601 tccaacgcag aatgacttga gaaatc
//
LOCUS       DADMJE010000368          625 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.373, whole genome shotgun sequence.
ACCESSION   DADMJE010000368 DADMJE010000000
VERSION     DADMJE010000368.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 625)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 625)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..625
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.373"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..247)
                     /locus_tag="JN001_004282"
     CDS             complement(<1..247)
                     /locus_tag="JN001_004282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000484566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055255.1"
                     /translation="MFPVSSIGNDISSDLVRRKMNDLPEIPIENNLEALAPGIEKLKQ
                     TSIQMVTLLNALQPGGKCIITGDFQKELAYLQNVILYN"
     gene            complement(269..>625)
                     /locus_tag="JN001_004283"
     CDS             complement(269..>625)
                     /locus_tag="JN001_004283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_417590.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055256.1"
                     /translation="AITALNFYQGDVPSVMIRIQPENMSPFIIDISTGEHDNYIIQTL
                     DVGTFAPFGEQCTCSAVNKKELECIKETISKYCAKFTQKEAILTAPTHFNKTCITSDC
                     WQILFFSPDHFNNDFY"
BASE COUNT          197 a           97 c          115 g          216 t
ORIGIN      
        1 cattataaag aattacattt tgtaagtacg ctaattcttt ttgaaaatca ccagtgataa
       61 tacattttcc acctggttgt aacgcgttaa gtaaagtgac catttgaata gaggtctgtt
      121 ttagtttttc tatacctggt gctagtgctt cgagattatt ttctatgggg atttcaggaa
      181 ggtcattcat ttttcgacgg actaaatcac tactaatatc attaccaatt gatgaaacag
      241 ggaacattat tttatccttt ataaataatc aataaaaatc attattaaaa tgatcgggtg
      301 aaaaaaagag aatttgccaa caatctgaag taatgcaggt tttattaaag tgcgtagggg
      361 ctgttaagat ggcttctttt tgggtgaact ttgcgcaata cttagaaatc gtctccttaa
      421 tacattccag ctctttttta ttgacggctg agcaagtaca ttgttcacca aaaggtgcaa
      481 aagtgcctac atctaatgtt tgtatgatat aattatcatg ttctcctgta gaaatatcta
      541 tgatgaatgg actcatattt tccggttgga ttcggatcat gacagaagga acatcgcctt
      601 gatagaaatt caatgcagta attgc
//
LOCUS       DADMJE010000369          606 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.374, whole genome shotgun sequence.
ACCESSION   DADMJE010000369 DADMJE010000000
VERSION     DADMJE010000369.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 606)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 606)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..606
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.374"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>606
                     /locus_tag="JN001_004284"
     CDS             <1..>606
                     /locus_tag="JN001_004284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS91-like element ISSbo1 family transposase"
                     /protein_id="HAY9055257.1"
                     /translation="LACGTRILGVKEYICDKPECPHVRYVTNSCGSRACPSCGKKATD
                     LWIATQLNRLPDCDWVHLVFTLPDTLWPVFESNRWLLNDVCRLAVENLLYAARKRGQE
                     PGIFCAIHTYGRRLNWHPHVHVSVTCGGLNKHGQWKKLSFLKDAMRSRWMWNMRQLLL
                     KAWSEGLAMPESLSHITTESQWRSLVLKAGGKYWHVYMSKK"
BASE COUNT          140 a          154 c          188 g          124 t
ORIGIN      
        1 tgctggcctg cggcacgcgg atactgggag tgaaggaata catctgcgat aaacctgagt
       61 gcccccacgt cagatacgtc actaactcat gcggcagccg tgcctgcccg tcctgcggaa
      121 aaaaggccac agacctgtgg atagcgacac agctgaatcg tcttcctgac tgcgactggg
      181 tacacctggt cttcaccctg ccggacacgc tgtggccggt gttcgaaagc aaccggtggc
      241 tgctgaatga cgtgtgccgt ctggcggtgg agaatctgct gtatgccgcc cggaaacggg
      301 ggcaggaacc cggtatcttc tgcgccatcc acacgtatgg ccgtcgtctc aactggcatc
      361 cgcatgtaca tgtgtctgta acctgtggag gtctgaataa gcatggtcag tggaaaaagc
      421 tgagcttcct gaaagacgcg atgcgttcac ggtggatgtg gaatatgcgg cagctgcttc
      481 tgaaagcgtg gtcagagggg ctggcgatgc cggagtcgtt gtcacatatc acgacggaat
      541 cacagtggag aagcctggtg ctgaaagccg gaggaaaata ctggcatgtg tacatgtcga
      601 aaaaaa
//
LOCUS       DADMJE010000370          598 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.375, whole genome shotgun sequence.
ACCESSION   DADMJE010000370 DADMJE010000000
VERSION     DADMJE010000370.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..598
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.375"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..598
                     /locus_tag="JN001_004285"
                     /pseudo
     CDS             1..598
                     /locus_tag="JN001_004285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611198.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS5 family transposase"
BASE COUNT          156 a          147 c          166 g          129 t
ORIGIN      
        1 attattttca acaggttgct ttcgctactt gatgcaaacg gctttattga ctggtctgcc
       61 accgcgctgg atggcagtaa tatccgggcg ctgaaatgtg ccgccggtgc tcaaaaaaac
      121 atcccgatat cgacggagat aatggcccgg gtcgctctcg cggcggtttt ggcaccaaaa
      181 tccatctggc aacagacgga agtggcctcc cgttaaatat cgtgctaagc cccggacaag
      241 ctcatgaaag ccagttcgcg caacgacttc tggacgggat tggcgttcag cgtcagaacg
      301 gcagcatgaa acgccgtgga catgcggtac tggctgataa agcgtattca gggcgcgcat
      361 tgcgcaacga gctgaaaaat aacggtataa aggcagtaat cccccgaaag tcaaatgaga
      421 aaatggcatc ggatggacgt gcacagcttg atcgtgatgc gtactgcaat cgtaatgtcg
      481 ttgaacggtg ctttgggcgg ctgaaagaat atcgccgcat cgccacgcgt tacgacaaaa
      541 cggcgagaaa ttacctggcg atggtgaaac tgggctgcat ccgactcttt tatcaacg
//
LOCUS       DADMJE010000371          590 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.376, whole genome shotgun sequence.
ACCESSION   DADMJE010000371 DADMJE010000000
VERSION     DADMJE010000371.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.376"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            244..>590
                     /locus_tag="JN001_004286"
     CDS             244..>590
                     /locus_tag="JN001_004286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbrial protein"
                     /protein_id="HAY9055258.1"
                     /translation="MSKKLGFALSGLMLAMVAGTASADMDGGQLNISGLVVDNTCETR
                     VDGGNKDGLILLQTATVGEIDAGVLNDTVGAKAKPFSITVDCSKANPNPGSTAKMTFG
                     SVFFGNSKGTLNN"
BASE COUNT          170 a          110 c          122 g          188 t
ORIGIN      
        1 atcgccatac cctaaccaat tgcacttgtg aatttatttt tgcttaattt tgaattaaga
       61 aaatttaatt tgttcaaaag cccttaaagt gcacaatagg cgtcctaatg aacaatggtt
      121 gtaaattttg gtaacaaata tcattgctca ttaatatcta gcatctgctt ataacatttg
      181 tgtcatgaat agtcattctt caaaccagta gtctgactaa tggaatttta ttcaaggatt
      241 tttatgtcta aaaaattagg ttttgccctg tctggtctta tgctggcaat ggttgcaggt
      301 actgcttctg ctgatatgga tggtggtcag ttaaatatca gtggtctggt tgttgataac
      361 acctgtgaaa cccgcgttga cggcggtaat aaagatggtc tgatcctgct gcaaactgca
      421 actgttggtg aaatcgatgc tggcgtgctg aatgacaccg ttggcgctaa agccaaacct
      481 ttcagcatca ccgttgactg cagcaaagca aatccgaatc caggtagtac agctaaaatg
      541 accttcggtt ctgttttctt tggtaatagc aaaggaacgc tgaacaacga
//
LOCUS       DADMJE010000372          577 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.377, whole genome shotgun sequence.
ACCESSION   DADMJE010000372 DADMJE010000000
VERSION     DADMJE010000372.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 577)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.377"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>577
                     /locus_tag="JN001_004287"
     CDS             <1..>577
                     /locus_tag="JN001_004287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055259.1"
                     /translation="PLRKGAQYEELRKLGKGDHLVKLKTSPQARKKWPGLGNEVTARL
                     LTVTRKGKVCHLLTSMTDAMRFPGGEMADLYSHRWEIELGYREIKQTMQLSRLTLRSK
                     KPELVEQELWGVLLAYNLVRYQMIKMAEHLKGYWPNQLSFSESCGMVMRMLMTLQGAS
                     PGRIPELMRDLASMGQLVKLPTRRGRAFPRVV"
BASE COUNT          170 a          117 c          181 g          109 t
ORIGIN      
        1 cctctcagaa agggagcgca atatgaagag ctcagaaaac tgggtaaagg cgatcatctg
       61 gtgaagctga aaaccagccc gcaggcacga aaaaagtggc cgggactggg aaatgaagtg
      121 acagcccgcc tgctgaccgt gacgcgcaaa ggaaaagtct gccatctgct gacgtcgatg
      181 acggacgcca tgcgcttccc cggaggagaa atggcggatc tgtacagtca tcgctgggaa
      241 attgaactgg gatacaggga gataaaacag acgatgcaac tgagcaggct gacgctgaga
      301 agtaaaaagc cggagcttgt ggagcaagag ctgtggggtg tcttactggc ttataatctg
      361 gtgagatatc agatgattaa aatggcggaa catctgaaag gttactggcc gaatcaactg
      421 agtttctcag aatcatgcgg aatggtgatg agaatgctga tgacattgca gggcgcttca
      481 ccgggacgta taccggagct gatgcgcgat cttgcaagta tgggacaact tgtgaaatta
      541 ccgacgagaa ggggaagggc cttcccgaga gtggtaa
//
LOCUS       DADMJE010000373          561 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.378, whole genome shotgun sequence.
ACCESSION   DADMJE010000373 DADMJE010000000
VERSION     DADMJE010000373.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 561)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 561)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..561
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.378"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..561
                     /locus_tag="JN001_004288"
                     /pseudo
     CDS             1..561
                     /locus_tag="JN001_004288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612086.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3-like element IS629 family transposase"
BASE COUNT          128 a          140 c          170 g          123 t
ORIGIN      
        1 gcgccgcagt aacgatatcc ttcgccaggc ttccgcttat tttgcgaagg cggagttcga
       61 ccgcctctgg aaaaaatgat gccactgctg gataagctgc gtgagcagta cggggtcgga
      121 ccgctatgca gcgaactgca tattgccccg tcaacgtatt accactgtca gcaacagcga
      181 catcatccgg ataaacgcag tgcccgtgcg cagcgcgatg actggctgaa gaaagagata
      241 cagcgcgtat acgatgaaaa tcacaaggta tacggtgtgc gtaaagtctg gcgtcagttg
      301 ttacgggaag gcatcagagt ggccagatgc actgtggcac gtctcatggc ggttatggga
      361 cttgccggtg ttctccgggg taaaaaggtc cgtacgacca tcagccggaa agccgttgcc
      421 gcaggcgacc gcgtaaaccg tcagttcgtg gcagaacgac ctgaccagct gtgggtggct
      481 gattttactt acgtcagcac atggcagggc ttcgtctatg tggcgttcat cattgatgtg
      541 tttgccggat acatcgtggg g
//
LOCUS       DADMJE010000374          559 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.379, whole genome shotgun sequence.
ACCESSION   DADMJE010000374 DADMJE010000000
VERSION     DADMJE010000374.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 559)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 559)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.379"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            3..>559
                     /gene="fimZ"
                     /locus_tag="JN001_004289"
     CDS             3..>559
                     /gene="fimZ"
                     /locus_tag="JN001_004289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001719888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fimbria biosynthesis transcriptional regulator
                     FimZ"
                     /protein_id="HAY9055260.1"
                     /translation="MIIMDTHPIIRMSIEVLLQKNSELQIVLKTDDYRITIDYLRTRP
                     VDLIIMDIDLPGTDGFTFLKRIKQIQSTVKVLFLSSKSECFYAGRAIQAGANGFVSKC
                     NDQNDIFHAVQMILSGYTFFPSETLNYIKSNKCSTNSSTVTVLSNREVTILRYLVSGL
                     SNKEIADKLLLSNKTVSAHKSNIYG"
BASE COUNT          180 a          103 c          106 g          170 t
ORIGIN      
        1 cggtgatcat tatggatact catcctatca tcagaatgtc tattgaagtt ctgttgcaaa
       61 aaaacagtga attgcagatt gtcctgaaaa cggatgatta ccgcataacc atcgattatc
      121 tccgaacccg tcctgttgat ttaatcatta tggatataga cttgcccgga acagacggtt
      181 ttaccttcct gaaaaggatc aaacaaatcc agagcacagt gaaagtgtta tttttatcat
      241 cgaaatcaga atgcttttat gctggcagag cgatacaagc tggtgctaac ggttttgtca
      301 gtaaatgcaa tgatcagaat gatatttttc atgccgttca gatgatcctc tccggataca
      361 cgttttttcc cagcgaaacg cttaactata taaaaagcaa taaatgtagt acgaatagtt
      421 caacggtcac tgtgctatct aatcgtgaag tgaccatatt acgttatctg gttagcggat
      481 tatctaataa agaaattgcc gataagttat tgcttagcaa taaaacagtt agtgcgcata
      541 aatctaatat ttatggcaa
//
LOCUS       DADMJE010000375          548 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.380, whole genome shotgun sequence.
ACCESSION   DADMJE010000375 DADMJE010000000
VERSION     DADMJE010000375.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..548
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.380"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(50..547)
                     /locus_tag="JN001_004290"
     CDS             complement(50..547)
                     /locus_tag="JN001_004290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000109921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porin"
                     /protein_id="HAY9055261.1"
                     /translation="MSVDYNIEGFGFVGAYSKSDRTNEQAGDGYGDNAEVWSLAAKYD
                     ANNIYAAMMYGETRNMTVLANDHFANKTQNFEAVVQYQFDFGLRPSLGYVYSKGKDLY
                     ARDGHKGVDADRVNYIEVGTWYYFNKNMNVYTAYKFNLLDKDDAAITDAATDDQFAVG
                     IIYQF"
BASE COUNT          152 a          121 c          111 g          164 t
ORIGIN      
        1 tcaggctagt gttatgtttt acagtaacac gccgcggcgc gttggctgat tagaactggt
       61 agatgatacc aactgcaaac tggtcatcag ttgcggcatc ggtaatcgct gcatcgtctt
      121 tatccagcag gttaaatttg tatgctgtgt agacgttcat gttcttattg aagtagtacc
      181 aggtaccaac ttcgatataa tttacgcggt cagcatcaac acctttatgt ccatcacgag
      241 cataaagatc tttgcctttg gaatatacgt agcctaaaga cggacgtaaa ccgaagtcga
      301 actgatactg tacaacagct tcaaagtttt gggttttatt tgcaaaatga tcattagcca
      361 aaacggtcat gttgcgggtt tcaccgtaca tcattgctgc atagatatta tttgcatcat
      421 acttggctgc taatgaccac acttcagcgt tatcaccgta gccgtcacca gcttgttcat
      481 tagtacgatc agatttgcta tatgcaccta caaaaccaaa accttcgatg ttgtagtcta
      541 cagacaac
//
LOCUS       DADMJE010000376          536 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.381, whole genome shotgun sequence.
ACCESSION   DADMJE010000376 DADMJE010000000
VERSION     DADMJE010000376.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 536)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 536)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..536
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.381"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>536
                     /locus_tag="JN001_004291"
     CDS             <1..>536
                     /locus_tag="JN001_004291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001297906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS110 family transposase"
                     /protein_id="HAY9055262.1"
                     /translation="DARDAAIIAEAARTLPHALRTLKLADEQIAELSMLCGFDDDLAA
                     QTTQASNRIRGLLTQIHPALERVLGPRLEHPAVLDLLQRYPSPEKLASLGEKKLAAQL
                     CKLAPRLGKRLAADIAQALAEQTVVVPGTNAAAVVLPRLALQLITLRKQRDEVALEVE
                     QRVLAHPLYPVLTSMPGV"
BASE COUNT          112 a          179 c          140 g          105 t
ORIGIN      
        1 tgatgctcgt gacgctgcca tcattgccga agctgcccgt accctgcctc acgcgctacg
       61 cacgctgaaa ctggctgacg agcaaatcgc cgaactctcc atgctctgcg gcttcgatga
      121 tgatcttgcc gcacagacaa cgcaggccag caaccgtatc cgcggccttc tgacccagat
      181 acatccggca ctggagcgcg ttctcggtcc gagacttgag cacccggcgg tactcgatct
      241 tctccagcga tatccctcac cagaaaaact cgcttcgctg ggtgagaaga agctggcagc
      301 ccagctctgc aaacttgcgc ctcgtctggg taaacgcctt gcagcagaca tagctcaggc
      361 actggccgaa caaaccgtcg tcgttcccgg cacgaatgcc gctgccgtag tactgccacg
      421 tctggcactc cagctcatca cgctgcgtaa gcaaagagac gaggtggcgc ttgaggtaga
      481 acagcgagtt cttgctcacc ctctttaccc ggtcctgacc agtatgcccg gagtcg
//
LOCUS       DADMJE010000377          515 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.382, whole genome shotgun sequence.
ACCESSION   DADMJE010000377 DADMJE010000000
VERSION     DADMJE010000377.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 515)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 515)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..515
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.382"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(1..104)
                     /locus_tag="JN001_004292"
                     /pseudo
     CDS             complement(1..104)
                     /locus_tag="JN001_004292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001672075.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus and C-terminus; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1472 domain-containing protein"
     gene            235..515
                     /locus_tag="JN001_004293"
                     /pseudo
     CDS             235..515
                     /locus_tag="JN001_004293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006322674.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
BASE COUNT          132 a          136 c          126 g          121 t
ORIGIN      
        1 tccccgccag cccggctaag atggaggcac ggcacagccc gcacacgacg ctgaggctac
       61 agagctgaaa acccacaagg ccatgccccg catggccggg taaagcggag ccggcggcga
      121 cttcctttgt gctctgtccg ggaccggcag gaaaaaggcg gggataatga gatggtcacc
      181 cccaccctaa cagcagtacg ctgttaaggt gaatccctta acggagagac catcatacag
      241 aacatcacac ttattggtat cgatctcgga aagcattcct tccacattca ttgtcaagac
      301 aagtctggta aggctcttct gcgtaaaaaa tttacccagt actaaactga tgcagtttct
      361 ggcaacatgt ccgccctcag ttgttgtaat ggaagcctgt gcgggtgcac actttttggc
      421 tcgccgtatc tctgaatttt ggacatgaaa ctaagctgat ttctccacag ttcgttcgcc
      481 cgtttgtcaa aagtaataag aatgattttg ttgat
//
LOCUS       DADMJE010000378          514 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.383, whole genome shotgun sequence.
ACCESSION   DADMJE010000378 DADMJE010000000
VERSION     DADMJE010000378.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 514)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 514)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..514
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.383"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..279
                     /locus_tag="JN001_004294"
     CDS             <1..279
                     /locus_tag="JN001_004294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS66 family transposase"
                     /protein_id="HAY9055263.1"
                     /translation="SLNVYCRNGQVEIDNNIGENALRSVAVGRKNYLFFGSDNGGESA
                     AIIYSLLVTCKLNGVEPEDWLREVIVKLNDWPSNRVHELLPWNFSAVK"
BASE COUNT          125 a          115 c          139 g          135 t
ORIGIN      
        1 agcctgaacg tgtactgtcg taatggccag gtggaaatcg acaacaacat cggtgaaaac
       61 gcgctgcgat cggtggcggt tggaagaaaa aattatctct tcttcggttc tgacaacggt
      121 ggagaaagcg cggcgattat ctacagtctg ctggtcacct gcaaactgaa cggagtggag
      181 ccggaggact ggttgcgcga agtgatcgtg aagctcaatg actggccgtc gaaccgagtg
      241 catgaactgc tgccctggaa cttctcagct gtaaaataat ccttccgcta cgtacttctc
      301 tgggcgctta ccactcaacg gcatcgtcaa aattatcaaa gcgcagaaca tagatttatc
      361 atgtgtttta tggatggctt tctccatcag gcatcgttcg tcacgggaaa ttggtgctat
      421 gatcggcatt gatcagtccg gttggtgatt tgttttgatt tggcgattga tcagatcgca
      481 caatccgggc tgagttccct ctaagtgatc tagg
//
LOCUS       DADMJE010000379          506 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.384, whole genome shotgun sequence.
ACCESSION   DADMJE010000379 DADMJE010000000
VERSION     DADMJE010000379.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 506)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.384"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(231..482)
                     /gene="dgcZ"
                     /locus_tag="JN001_004295"
                     /pseudo
     CDS             complement(231..482)
                     /gene="dgcZ"
                     /locus_tag="JN001_004295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_416052.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase DgcZ"
BASE COUNT          131 a          120 c          109 g          146 t
ORIGIN      
        1 tgggatgact aatgaacgga gataatccct cacctaaccg gccccttgtt acagttgtgt
       61 acaaggggcc tgatttttat gacggcgaaa aaaaaccgcc agtaaaccgg cggtgaatgc
      121 ttgcatggat agatttgtgt tttgctttta cgctaacagg cattttcctg cactgataac
      181 gaatcgttga cacagtagca tcagttttct caatgaatgt taaacggagc ttaaactcgg
      241 ttaatcacat tttgttcgtc aataaacata cagcgatttc ttcccgtttg cttaccctca
      301 tacattgccc ggtctgctct tccaatgacc acatccagag gctcttcagg aaatgcgcga
      361 ctgacacctg ctgtcacggt aatgttgata tgcccttcag aatgtgtgat ggcatggtta
      421 tcgactaact ggcaaattct gacacctgca cgacatgctt cttcatcatt agccgctttg
      481 aggtgtactg gcaatagcgg acacta
//
LOCUS       DADMJE010000380          504 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.385, whole genome shotgun sequence.
ACCESSION   DADMJE010000380 DADMJE010000000
VERSION     DADMJE010000380.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 504)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 504)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..504
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.385"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..313
                     /locus_tag="JN001_004296"
     CDS             <1..313
                     /locus_tag="JN001_004296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="IS21 family transposase"
                     /protein_id="HAY9055264.1"
                     /translation="QYTRNSFYIPLMTRLRPMGITVDVETANRHGLRWLHDVANQRKH
                     ETIQARPCDRWLEEQQSMLALPPEKKEYDVHPGENLVNFDKHPLHHPLSIYDSFCRGV
                     A"
     gene            310..>504
                     /locus_tag="JN001_004297"
     CDS             310..>504
                     /locus_tag="JN001_004297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055265.1"
                     /translation="MMMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFL
                     EHLLHEEKLARHQRKQAMYTR"
BASE COUNT          136 a          142 c          126 g          100 t
ORIGIN      
        1 gcagtacacc cgtaacagtt tttacatccc actaatgact cgcctgcgcc cgatggggat
       61 cactgtcgat gttgaaacag ccaaccgcca cggtctgcgc tggctgcacg atgtcgctaa
      121 ccaacgaaag catgaaacaa tccaggcccg tccctgcgat cgctggctcg aagagcagca
      181 gtccatgctg gcactgcctc cggagaaaaa agagtatgac gtgcatcctg gtgaaaatct
      241 ggtgaacttc gataaacacc ccctgcatca tccactctcc atctacgact cattctgcag
      301 aggagtggcg tgatgatgga actgcaacat caacgactga tggcgctcgc cgggcagttg
      361 caactggaaa gccttataag cgcagcgcct gcgctgtcac aacaggcagt agaccaggaa
      421 tggagttata tggacttcct ggagcatctg cttcatgaag aaaaactggc acgtcatcaa
      481 cgtaaacagg cgatgtatac ccga
//
LOCUS       DADMJE010000381          474 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.386, whole genome shotgun sequence.
ACCESSION   DADMJE010000381 DADMJE010000000
VERSION     DADMJE010000381.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..474
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.386"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..254
                     /gene="tnpA"
                     /locus_tag="JN001_004298"
     CDS             <1..254
                     /gene="tnpA"
                     /locus_tag="JN001_004298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000604943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS200/IS605 family transposase"
                     /protein_id="HAY9055266.1"
                     /translation="DATEKLRTYFSNVCADFEAELVEMDGEPDHVHLLINYPPKLAIS
                     SLVNSLKGVLWSPGYFASSCGGAPISVIRQYIEQQQTPG"
BASE COUNT          140 a          119 c           94 g          121 t
ORIGIN      
        1 atgacgcgac agaaaaacta cgcacttact tttcaaatgt atgtgctgat tttgaagctg
       61 aactggttga aatggatggc gaaccagatc acgtccattt gttaattaac tatcctccca
      121 aactggcaat atccagtctg gtaaacagcc tcaaaggcgt tttgtggagt cctggctatt
      181 ttgccagtag ctgcggaggt gcgccaatat ccgtcatccg ccaatacatt gaacaacagc
      241 aaacacctgg ttaggtggaa aaccacgcct tatatccctg ccctgaagga cggggtttta
      301 cggcgcaccg gataagcctg gagattatct acaccagcat ggacatcatt gtactatgcc
      361 ccgtacatgc cccatcacat cctcaacatc aaagtattag agccttgcaa accattatgc
      421 gtctcagttt gtctcatcta tcttacgcaa aaaaaaatag aactaatatc aagc
//
LOCUS       DADMJE010000382          449 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.387, whole genome shotgun sequence.
ACCESSION   DADMJE010000382 DADMJE010000000
VERSION     DADMJE010000382.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 449)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 449)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..449
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.387"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..333)
                     /locus_tag="JN001_004299"
     CDS             complement(<1..333)
                     /locus_tag="JN001_004299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707670.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HAY9055267.1"
                     /translation="MTLYQIKPLFQSLLRPTMFWLYKHHVTANHITLTALALSLFTGL
                     LLVLVAQPILFLLLPIVLFIRMALNALDGMLARECNQQTRLGAILNETGDVISDIALY
                     LPFLFLPES"
BASE COUNT          141 a           95 c          108 g          105 t
ORIGIN      
        1 actttccggt aaaaataaaa acggtaaata gagcgcaata tcggaaataa catcgccagt
       61 ttcattcaaa atcgccccca gacgtgtttg ctgattgcac tcacgcgcca acatgccatc
      121 cagcgcattg agcgccatac ggataaaaag cacgatgggc aatagcaaaa agaggatggg
      181 ttgtgccacc aacaccaaca gcaatccggt aaaaagagaa agcgccagtg ccgtaagagt
      241 gatgtgattc gctgtaacgt ggtgcttata aagccaaaac atcgtcggcc ttaacagcga
      301 ctgaaagagc ggttttatct ggtagagcgt catttatcat tccgtgatat tcagtttgct
      361 ctatggtgca tcaattgtga tggcggagat atcacaacgc ggagcatcaa cgtaaattcg
      421 gaatatatca agatgtggtg gatggtttt
//
LOCUS       DADMJE010000383          432 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.388, whole genome shotgun sequence.
ACCESSION   DADMJE010000383 DADMJE010000000
VERSION     DADMJE010000383.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 432)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 432)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..432
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.388"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>432
                     /locus_tag="JN001_004300"
     CDS             <1..>432
                     /locus_tag="JN001_004300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_707257.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HAY9055268.1"
                     /translation="AEQAKNDIDAALTGTLKMANHLSEIAAAGEKAQQKSRDNLGLKS
                     AATMEAQSDIYDRTKGRLAIPGAFGFGCAFLPEDVIRFDTKSDFLAWVRNALPGEYSV
                     AGPYDIIIPDTRFEGVLSIRWTDARPETTEPRYRAKSLTFYG"
BASE COUNT          113 a          112 c          119 g           88 t
ORIGIN      
        1 gcagaacagg ccaaaaatga cattgatgct gcgctgaccg gcactctgaa aatggctaac
       61 catctgtcag aaatcgcagc agcaggcgaa aaggcacaac agaagtcccg ggataatctg
      121 gggctgaaaa gtgcggccac gatggaagca cagagcgaca tttacgaccg gacaaaaggc
      181 cgtctggcga tacccggcgc attcggcttt gggtgtgctt ttctgcctga agatgttatc
      241 cgttttgaca ctaagagtga tttcctggcc tgggtaagga atgcgctgcc aggtgaatat
      301 tccgttgctg gcccctacga catcatcata cccgacacac ggtttgaagg ggtgctcagc
      361 atccggtgga ctgatgcacg ccctgagaca acagaaccgc ggtacagagc caaatccctt
      421 actttttacg gc
//
LOCUS       DADMJE010000384          431 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.389, whole genome shotgun sequence.
ACCESSION   DADMJE010000384 DADMJE010000000
VERSION     DADMJE010000384.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 431)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 431)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..431
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.389"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>431
                     /gene="virK"
                     /locus_tag="JN001_004301"
     CDS             <1..>431
                     /gene="virK"
                     /locus_tag="JN001_004301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_858370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="virulence factor VirK"
                     /protein_id="HAY9055269.1"
                     /translation="LTQNGHIAFIGGLQGAPKNTGPDVIRCATRACYGIFPKRIIFEA
                     FCALMKACNISECLAVSEHSHVFRQLRYWYQKRKTFVAVYSDFWESVAGKTCGDWYRL
                     PTQVIRKPLSDIASKKRSEYRKRYALLDYIHETTIRSLDAY"
BASE COUNT          118 a           88 c          102 g          123 t
ORIGIN      
        1 ttctgactca aaatggacac attgctttta ttggcggatt acagggagcc cctaaaaata
       61 ccggacctga tgttattcgg tgcgcaaccc gggcctgtta tgggattttc ccaaaacgga
      121 ttatttttga agcattttgt gcgttgatga aagcttgcaa tatctctgag tgtctggcag
      181 tcagtgagca cagtcatgtt ttccggcaat tgagatactg gtatcagaaa cgcaaaacct
      241 ttgttgcggt ctatagtgat ttctgggagt ctgtagcagg aaaaacctgt ggtgactggt
      301 acagattacc aacccaggtg attcgaaagc cgctaagcga tatagccagt aaaaaacgct
      361 ctgagtaccg aaaacgatac gctttgctgg attatatcca tgaaactact atccgctctt
      421 tggatgcata t
//
LOCUS       DADMJE010000385          419 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.390, whole genome shotgun sequence.
ACCESSION   DADMJE010000385 DADMJE010000000
VERSION     DADMJE010000385.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 419)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 419)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..419
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.390"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..419
                     /locus_tag="JN001_004302"
                     /pseudo
     CDS             1..419
                     /locus_tag="JN001_004302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611435.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          100 a          107 c          121 g           91 t
ORIGIN      
        1 ctgcctctga acttgctgcc gccatgaagc agattaaaga actccagcgc ctgctcggca
       61 agaaaacgat ggaaaatgaa ctcctcaaag aagccgttga atatggacgg gcaaaaaagt
      121 ggatagcgca cgcgccctta ttgcccgggg atggggagta agcttagtca gccgttgtct
      181 ccgggtgtcg cgtgcgcagt tgcacgtcat tctcagacga accgatgact ggatggatgg
      241 ccgccgcagt cgtcacactg atgatacgga tgtgcttctc cgtatacacc atgttatcgg
      301 agagctgccc acgtatggtt atcgtcgggt atgggcgctg cttcgcagac aggcagaact
      361 tgatggtatg cctgcgatca atgccaaacg tgtttaccgg atcatgcgcc agaatgcgc
//
LOCUS       DADMJE010000386          400 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.391, whole genome shotgun sequence.
ACCESSION   DADMJE010000386 DADMJE010000000
VERSION     DADMJE010000386.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 400)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 400)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..400
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.391"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..191)
                     /locus_tag="JN001_004303"
     CDS             complement(<1..191)
                     /locus_tag="JN001_004303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4754 domain-containing protein"
                     /protein_id="HAY9055270.1"
                     /translation="MGKEYKTLINKALERFYFRLSASGAHAERAARDSLTRAIRSLYD
                     VAFYADDLDALNELSELICA"
     gene            complement(203..>400)
                     /locus_tag="JN001_004304"
     CDS             complement(203..>400)
                     /locus_tag="JN001_004304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055271.1"
                     /translation="TPAGKNGADEATYVYLNGTRLLVELPYQTVQEIISEAEKARQVN
                     GDEPYIEIICMDSEAEIQKAD"
BASE COUNT           99 a           98 c           87 g          116 t
ORIGIN      
        1 gcacagatca gctcggaaag ttcgttaagt gcatccagat catcagcgta aaaagccacg
       61 tcatacagac ttcggattgc tctggtcaat gagtcacggg ccgcacgttc agcatgagcg
      121 cctgatgcac ttaagcgaaa ataaaaacgc tcaagtgctt tgttaatgag agttttatat
      181 tctttgccca tcacaacgcc ctttaatctg ctttctgtat ttcagcttct gaatccatac
      241 aaataatttc gatatagggt tcatcgccat taacctggcg tgccttttca gcttcgctaa
      301 tgatttcttg tacggtctgg tacggaagtt ccacaagcag tcgcgtgccg ttcagataaa
      361 cgtaagtggc ttcgtcggct ccgtttttac ccgccggagt
//
LOCUS       DADMJE010000387          389 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.392, whole genome shotgun sequence.
ACCESSION   DADMJE010000387 DADMJE010000000
VERSION     DADMJE010000387.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 389)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 389)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..389
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.392"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..>389)
                     /locus_tag="JN001_004305"
     CDS             complement(<1..>389)
                     /locus_tag="JN001_004305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000627495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HAY9055272.1"
                     /translation="RFETEPGRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDN
                     MRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMG
                     FSPRLCRPFRAQTKGKVERMEQFLHPT"
BASE COUNT          100 a          106 c           99 g           84 t
ORIGIN      
        1 agtgggatgt aaaaactgtt ccatccgttc caccttacct ttagtctgtg ccctgaaggg
       61 gcgacacagt cggggagaga agcccatctc cttgccgaac tgccacagcg aaggatggaa
      121 ccggtgctga ccggtctgat atgcgtcacg ttgcagaacc acagttttca tattgtcata
      181 caacacttcg cgcggcacac caccaaagaa gcggaacgca ttacgatggc aggtctccag
      241 cgtgtcataa cgcatattgt cagtgaattc gatgtacaac attcggctgt atccgggaac
      301 agcaacgaac acgtgaagcg gtgagcgacc attacgcata gtgccccagt caacctgcat
      361 ctgtcgtccg ggttcagttt cgaaccgaa
//
LOCUS       DADMJE010000388          384 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.393, whole genome shotgun sequence.
ACCESSION   DADMJE010000388 DADMJE010000000
VERSION     DADMJE010000388.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 384)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 384)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..384
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.393"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            186..341
                     /locus_tag="JN001_004306"
                     /pseudo
     CDS             186..341
                     /locus_tag="JN001_004306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000343613.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="IS256 family transposase"
BASE COUNT          121 a           83 c           98 g           82 t
ORIGIN      
        1 cagagagcag aacgggatct atacttttgc gggtcaacat aagaggatga gtccttaata
       61 aaacaggtcc tcagagaata catattctgc ggagcgtgcg gcaacaacag gacgaacagg
      121 ggcggttttc aatttgcagc cgtcaggctg ccgtggttca ctccaacaac ggagacaggt
      181 aaattatgga cgaaaagaag cttaaagccc ttgcggctga actggctaaa ggcctcaaaa
      241 ccgaggccga cctcaatcag ttttcccgta tgcagacgaa attaactgtc gaaacggtgc
      301 ttaatgagga actaactgac catctcgggc atgaaaaaag ctacatccgg tagtaaacat
      361 tatcagtggg ttatgcgata tgat
//
LOCUS       DADMJE010000389          370 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.394, whole genome shotgun sequence.
ACCESSION   DADMJE010000389 DADMJE010000000
VERSION     DADMJE010000389.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..370
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.394"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            1..370
                     /locus_tag="JN001_004307"
                     /pseudo
     CDS             1..370
                     /locus_tag="JN001_004307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="frameshifted; incomplete; missing N-terminus and
                     C-terminus; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="IS3 family transposase"
BASE COUNT          121 a           92 c           90 g           67 t
ORIGIN      
        1 tcagggcaaa acaccaaaag cctctccgat aacaccagaa caaatcgaaa tacgtaagct
       61 gaggaaaaag ctacaacgca ttgaaatgga gaatgaaata ttaaaaaagg ctaccgcgct
      121 cttgatgtca gactccctga acagttctcg ataatcggga aactcagagc gcattatcct
      181 gtggtcacac tctgccaagt gttcggggtt catcgcagca gctacagata ctggaaaaac
      241 cgtcctgaaa aaccagacgg cagacgggct gtattacgca gtcaggtact tgagctacat
      301 ggcatcagcc atggttcggc cggagcaaga agcatcgcca caatggcaac ccggagaggc
      361 taccagatgg
//
LOCUS       DADMJE010000390          366 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.395, whole genome shotgun sequence.
ACCESSION   DADMJE010000390 DADMJE010000000
VERSION     DADMJE010000390.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 366)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 366)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..366
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.395"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            17..>366
                     /gene="leuE"
                     /locus_tag="JN001_004308"
     CDS             17..>366
                     /gene="leuE"
                     /locus_tag="JN001_004308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001396690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine efflux protein LeuE"
                     /protein_id="HAY9055273.1"
                     /translation="MVLVPGPNTLFVLKNSVSSGMKGGYLAACGVFIGDAVLMFLAWA
                     GVATLIKTTPILFNIVRYLGAFYLLYLESKILYATLKGKNNEAKSDEPQYGAIFKRAL
                     ILSLTNPKAILFYVS"
BASE COUNT           87 a           72 c           92 g          115 t
ORIGIN      
        1 ggttggggcc atttttattg tgttggtgcc tgggccaaat accctgtttg tactcaaaaa
       61 tagcgtcagt agcggtatga aaggcggtta tcttgcggcc tgcggtgtat ttattggcga
      121 tgcagtattg atgtttctgg catgggctgg agtggcgaca ttaattaaga ccaccccgat
      181 attattcaac attgtacgtt atcttggtgc gttttatttg ctctatctgg agagtaaaat
      241 tctctacgcg accctgaagg gtaaaaataa cgaggccaaa tccgatgagc cccaatacgg
      301 ggccattttt aaacgcgcgt taattttgag cctgactaat ccgaaagcca ttttgttcta
      361 tgtgtc
//
LOCUS       DADMJE010000391          365 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.396, whole genome shotgun sequence.
ACCESSION   DADMJE010000391 DADMJE010000000
VERSION     DADMJE010000391.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 365)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 365)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..365
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.396"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..355)
                     /locus_tag="JN001_004309"
     CDS             complement(<1..355)
                     /locus_tag="JN001_004309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_415836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family transcriptional regulator"
                     /protein_id="HAY9055274.1"
                     /translation="MSPTIYDIARVAGVSKSTVSRVLNKQTNISPEAREKVLRAIEEL
                     QYQPNKQARALTSSGFDAIMVISTRSTKTTAGNPFFSEVLHAITAKAEEEGFDVILQT
                     SHNPAEDLQKCESKIK"
BASE COUNT           89 a           82 c           90 g          104 t
ORIGIN      
        1 gcttaatttt gctttcacat ttttgtaagt cttctgccgg attgtgcgac gtctgcaata
       61 tcacgtcgaa accttcctct tcagctttgg cggtgatggc atgcaaaact tcagagaaaa
      121 acggattacc cgccgtagtt ttggtcgaac gggtagaaat caccataatg gcatcaaaac
      181 ccgaagaggt cagcgcgcgg gcctgcttgt ttggctgata ctgtaattct tcaatggccc
      241 gtaacacttt ttcgcgcgct tccggggaga tattagtttg cttattcagc acgcgtgata
      301 cggtggattt tgatacgcct gcaaccctgg caatatcata aatagtaggg gacataggtc
      361 aggaa
//
LOCUS       DADMJE010000392          364 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.397, whole genome shotgun sequence.
ACCESSION   DADMJE010000392 DADMJE010000000
VERSION     DADMJE010000392.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.397"
                     /strain="H111840194"
                     /db_xref="taxon:621"
BASE COUNT           81 a          104 c           85 g           94 t
ORIGIN      
        1 taaccggctc atttaaaccg tctggtctgt ttcctccggc tccacaaaaa taatgtccat
       61 cattttgaag tggacactat cgtatggaat accggacctg gatcactgaa gctttacgcc
      121 ttcatttcga agaacattta ccacgggttg tggccggacg tcgcctgggc gtaccaaaat
      181 caactgtctg tggtatgttc gtgcgcttcc gcaacgctgg cctttcatgg cctctgcccg
      241 caggtatgtc ggagcaggaa cttgatgccc ttctttacgg aagtgcctcc acagtacctg
      301 tcgtacttac tgaaagcacc gttatgccca aactcccggt ggtaaaaaaa cgtccccggc
      361 ggcc
//
LOCUS       DADMJE010000393          346 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.398, whole genome shotgun sequence.
ACCESSION   DADMJE010000393 DADMJE010000000
VERSION     DADMJE010000393.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..346
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.398"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>346
                     /locus_tag="JN001_004310"
     CDS             <1..>346
                     /locus_tag="JN001_004310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="IS3 family transposase"
                     /protein_id="HAY9055275.1"
                     /translation="RTRETYGTRRLQTELAENGIIVGRDRLARLRKELRLRCKQKRKF
                     RATTNPNHNLPVAPNLLNQTFAPTAPNQVWVADLTYVATQEGWLYLAGIKDVYTCEIV
                     GYAMGERMTKELT"
BASE COUNT           91 a           92 c           98 g           65 t
ORIGIN      
        1 tccgcactcg cgaaacatat ggaacccggc ggctccagac ggagctggca gagaatggca
       61 tcatcgttgg tcgtgaccga ctggcacgtc ttcgtaagga gctaaggcta cgctgtaagc
      121 agaaacgcaa gttcagagcg actacgaacc cgaaccacaa tctgccagtt gcgccaaatc
      181 tgctgaacca gacgttcgct cctacagcac caaatcaggt ctgggtggcg gacctgacgt
      241 atgttgccac acaggaggga tggttgtacc tcgctggcat caaagatgtt tatacgtgcg
      301 aaattgtcgg ctacgccatg ggagagcgca tgacaaaaga gctgac
//
LOCUS       DADMJE010000394          338 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.399, whole genome shotgun sequence.
ACCESSION   DADMJE010000394 DADMJE010000000
VERSION     DADMJE010000394.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..338
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.399"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            88..>338
                     /locus_tag="JN001_004311"
     CDS             88..>338
                     /locus_tag="JN001_004311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055276.1"
                     /translation="MPQRHHQGHKRTPKQLALIIKRCLPMVLTGSGMLCTTANAEEYY
                     FDPIMLETTKSGMQTTDLSRFSKKYAQLPGTYQVDIWLN"
BASE COUNT          112 a           84 c           70 g           72 t
ORIGIN      
        1 ggctgcaatc aatgattatg gcggcagttc cgggacagaa actcgtccac tgcaataaca
       61 aatataaaaa acacaggtca tcagggaatg ccacaacgac accaccaggg acataaacgc
      121 acaccgaaac agttggcgct catcatcaaa cgctgtttgc cgatggtgct cactggcagc
      181 ggcatgcttt gcactaccgc taacgccgaa gagtattatt tcgaccccat tatgctggaa
      241 actacaaaaa gtggtatgca aacaactgat ctgtcacgtt tttcaaaaaa atacgcacaa
      301 ctaccaggaa cttatcaggt tgatatctgg ctgaataa
//
LOCUS       DADMJE010000395          331 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.400, whole genome shotgun sequence.
ACCESSION   DADMJE010000395 DADMJE010000000
VERSION     DADMJE010000395.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.400"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            178..>331
                     /locus_tag="JN001_004312"
     CDS             178..>331
                     /locus_tag="JN001_004312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000820618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HAY9055277.1"
                     /translation="MKRHNQRLKIISEYFGGVPVKNIGIREVYSFLEIRAAGSKFAIA
                     NQYRALL"
BASE COUNT          124 a           48 c           74 g           85 t
ORIGIN      
        1 atcggaagag acaaaagaat tgcagttaat gaggctattg cggcaaatat ggaattatta
       61 tccacgcaac atataagctt actggataga ataaaaggta atagcgtaac attattctgc
      121 gagctgatat taaatttcag aaatgaaata gagcgtagac aattaagcac aaacaccatg
      181 aaaagacaca accagaggtt gaaaatcata agtgaatact ttggtggtgt tccggttaaa
      241 aatataggca taagggaggt gtacagcttt cttgaaatca gagcagctgg gagtaaattt
      301 gctattgcta accagtacag ggcgctttta t
//
LOCUS       DADMJE010000396          331 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.401, whole genome shotgun sequence.
ACCESSION   DADMJE010000396 DADMJE010000000
VERSION     DADMJE010000396.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.401"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(<1..>331)
                     /locus_tag="JN001_004313"
     CDS             complement(<1..>331)
                     /locus_tag="JN001_004313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_414844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055278.1"
                     /translation="LLFLYINKDNIKVIYSLKINQTTPGILVSCDSNNNFACQTTMTE
                     DVIQRITTFFHTSPDVKNREIKLEWSGDKRDLPTAEAEISRVQASIIKWYASEYHNGR
                     QVLDEIQI"
BASE COUNT           85 a           66 c           60 g          120 t
ORIGIN      
        1 gtatttgtat ctcatcgaga acttgcctgc cattatggta ttctgacgca taccatttga
       61 taatagacgc ctgcacgcga gatatttccg cttcagcagt tggtaaatct ctcttatctc
      121 ctgaccattc cagctttatt tctctgttct tgacatctgg gctggtgtga aaaaatgtag
      181 taattcgctg tataacatct tcagtcattg tggtctgaca ggcaaaatta ttattgctat
      241 cacagctaac aagtatacct ggcgttgtct ggtttatttt taggctgtaa atcactttta
      301 tattgtcttt attgatatac agaaacaaca g
//
LOCUS       DADMJE010000397          326 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.402, whole genome shotgun sequence.
ACCESSION   DADMJE010000397 DADMJE010000000
VERSION     DADMJE010000397.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.402"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>326
                     /locus_tag="JN001_004314"
     CDS             <1..>326
                     /locus_tag="JN001_004314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_310125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HAY9055279.1"
                     /translation="EYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACML
                     GGMAMKWRWRKRMEAAGKPTDKPNLVCGPVQICWHKFARYWDVELREIPMRPGQLFMD
                     PKRMIEA"
BASE COUNT           74 a           85 c           97 g           70 t
ORIGIN      
        1 gaatatccgc aatccgcagc catcgacctg cgttgcgtaa atatggttgc cgatctgtgg
       61 catgcgcctg cgccgaaaaa tggtcaggcc gttggcacca acaccattgg ttcttccgag
      121 gcctgtatgc tcggcgggat ggcgatgaaa tggcgttggc gcaagcgtat ggaagctgca
      181 ggcaaaccaa cggataaacc aaacctggtg tgcggtccgg tacaaatctg ctggcataaa
      241 ttcgcccgct actgggatgt ggagctgcgt gagatcccta tgcgccccgg tcagttgttt
      301 atggacccga aacgcatgat tgaagc
//
LOCUS       DADMJE010000398          314 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.403, whole genome shotgun sequence.
ACCESSION   DADMJE010000398 DADMJE010000000
VERSION     DADMJE010000398.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.403"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>314
                     /locus_tag="JN001_004315"
     CDS             <1..>314
                     /locus_tag="JN001_004315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_706235.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055280.1"
                     /translation="PALVGNDIGCGMALWQTDILARKYNADKFEKRLSDLDDVAEESW
                     LEENLPSAFAQHPWCSSLGSIGGGNHFAELQQVDQIINAELFALAGLDAQHLQLLVHS
                     GS"
BASE COUNT           80 a           75 c           83 g           76 t
ORIGIN      
        1 atccggcact ggtcggcaat gatatcggct gcggtatggc gctatggcaa acagatattc
       61 tcgctcgcaa atacaacgcc gataagtttg aaaagcgatt atcagatctg gatgacgttg
      121 ctgaagaaag ctggctggag gaaaacctgc cgtcagcatt tgcacagcat ccgtggtgca
      181 gctcgcttgg ctctatcggt ggcggcaatc atttcgctga actgcaacaa gttgatcaaa
      241 tcatcaacgc tgaactgttt gcactagcag gtctggatgc acaacatctg caactgttgg
      301 ttcatagcgg ctcg
//
LOCUS       DADMJE010000399          309 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.denovo.404, whole genome shotgun sequence.
ACCESSION   DADMJE010000399 DADMJE010000000
VERSION     DADMJE010000399.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 309)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 309)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..309
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.denovo.404"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            <1..>309
                     /locus_tag="JN001_004316"
     CDS             <1..>309
                     /locus_tag="JN001_004316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076611483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DDE-type integrase/transposase/recombinase"
                     /protein_id="HAY9055281.1"
                     /translation="SFSPDSRLTMKALEMAWETRGKPGGVMFHSDQGSHYTSRQFRQL
                     LWRYQIRQSMSRRGNCWDNSPMERFFRSLKNEWMPVVGYVSFSEAAHAITDYIVGYYS
                     A"
BASE COUNT           78 a           73 c           98 g           60 t
ORIGIN      
        1 gtcgttctcg ccggacagca ggctcaccat gaaagcgctg gaaatggcat gggaaacccg
       61 tggtaagccc ggcggggtga tgttccacag cgatcagggc agtcattata cgagcaggca
      121 gttccggcag ttattgtggc gataccagat cagacagagt atgagccggc gcggaaactg
      181 ctgggataac agcccaatgg aacgcttctt caggagtctg aagaacgaat ggatgccggt
      241 ggtgggttac gtaagcttca gcgaggcagc tcacgccata acggactata tcgttggata
      301 ttacagcgc
//
LOCUS       DADMJE010000400        33555 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.guided.027, whole genome shotgun sequence.
ACCESSION   DADMJE010000400 DADMJE010000000
VERSION     DADMJE010000400.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 33555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33555
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.guided.027"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            561..800
                     /locus_tag="JN001_004317"
     CDS             561..800
                     /locus_tag="JN001_004317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001353740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1819 family protein"
                     /protein_id="HAY9055282.1"
                     /translation="MTPFRYNSDLTSGSLQTRECRIITGLLLQELDEAAWDKAMYKEN
                     VLQKRTQSTVRRISSALRKRLEHLSSDFWAFAFLC"
     gene            complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JN001_004318"
                     /pseudo
     CDS             complement(988..1965)
                     /gene="intI2"
                     /locus_tag="JN001_004318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_023994230.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="class 2 integron integrase IntI2"
     gene            2297..2770
                     /locus_tag="JN001_004319"
     CDS             2297..2770
                     /locus_tag="JN001_004319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001355915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trimethoprim-resistant dihydrofolate reductase
                     DfrA1"
                     /protein_id="HAY9055283.1"
                     /translation="MKLSLMVAISKNGVIGNGPDIPWSAKGEQLLFKAITYNQWLLVG
                     RKTFESMGALPNRKYAVVTRSSFTSDNENVLIFPSIKDALTNLKKITDHVIVSGGGEI
                     YKSLIDQVDTLHISTIDIEPEGDVYFPEIPSNFRPVFTQDFASNINYSYQIWQKG"
     gene            2865..3389
                     /gene="sat2"
                     /locus_tag="JN001_004320"
     CDS             2865..3389
                     /gene="sat2"
                     /locus_tag="JN001_004320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000704156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="streptothricin N-acetyltransferase Sat2"
                     /protein_id="HAY9055284.1"
                     /translation="MKISVIPEQVAETLDAENHFIVREVFDVHLSDQGFELSTRSVSP
                     YRKDYISDDDSDEDSACYGAFIDQELVGKIELNSTWNDLASIEHIVVSHTHRGKGVAH
                     SLIEFAKKWALSRQLLGIRLETQTNNVPACNLYAKCGFTLGGIDLFTYKTRPQVSNET
                     AMYWYWFSGAQDDA"
     gene            3447..4235
                     /gene="aadA1"
                     /locus_tag="JN001_004321"
     CDS             3447..4235
                     /gene="aadA1"
                     /locus_tag="JN001_004321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014325834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANT(3'')-Ia family aminoglycoside
                     nucleotidyltransferase AadA1"
                     /protein_id="HAY9055285.1"
                     /translation="MREAVIAEVSTQLSEVVGVIERHLEPTLLAVHLYGSAVDGGLKP
                     HSDIDLLVTVTVRLDETTRRALINDLLETSASPGESEILRAVEVTIVVHDDIIPWRYP
                     AKRELQFGEWQRNDILAGIFEPATIDIDLAILLTKAREHSVALVGPAAEELFDPVPEQ
                     DLFEALNETLTLWNSPPDWAGDERNVVLTLSRIWYSAVTGKIAPKDVAADWAMERLPA
                     QYQPVILEARQAYLGQEDRLASRADQLEEFVHYVKGEITKVVGK"
     gene            4311..4808
                     /locus_tag="JN001_004322"
     CDS             4311..4808
                     /locus_tag="JN001_004322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001444089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055286.1"
                     /translation="MRDLLKVVLSLVLAMASGQALADLPIVLVDEARLPYDYSPSNYD
                     ISPSNYDNSISNYDNSPSNYDNSESNYDNSSSNYDNSRNGNRRLIYSANGSRTFAGYY
                     VIANNGTTNFFSTSGKRMFYTPKGGRGVYGGKDGSFCGALVVINGQFSLALTDNGLKI
                     MYLSN"
     gene            4869..5240
                     /locus_tag="JN001_004323"
     CDS             4869..5240
                     /locus_tag="JN001_004323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000119696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055287.1"
                     /translation="MSYEPPRDGYTNGYIVDVMYDNRPSKYPAVFRTYVRIPDYVELD
                     NAEELADAIIREVELKEAWLTRVLGNSADPDASVGKWDRRLAQCGGIDEMSSGVQATY
                     FSPNGQLVGLVAYIDAEWMDE"
     gene            5650..6027
                     /locus_tag="JN001_004324"
     CDS             5650..6027
                     /locus_tag="JN001_004324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001271300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055288.1"
                     /translation="MSAAKALAYALCDKLESKKVDEVVRNLVSSGWNIREVAWEASSF
                     DHEMPYFDTGRDFDIGFPDTLSSKIEFLTANGSIVQARARLHFKQALIFAKASKHVAA
                     LKNSLDYYYGSSVIPPQNHGGYL"
     gene            6050..6202
                     /locus_tag="JN001_004325"
                     /pseudo
     CDS             6050..6202
                     /locus_tag="JN001_004325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011069623.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            complement(6258..7874)
                     /locus_tag="JN001_004326"
     CDS             complement(6258..7874)
                     /locus_tag="JN001_004326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000251878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY9055289.1"
                     /translation="MVRLATFNDNVQVVHIGHLFRNSGHKEWRIFVWFNPMQERKWTR
                     FTHLPLLSRAKVVNSTTKQINKADRVIEFEASDLQRAKIIDFPNLSSFASVRNKDGAQ
                     SSFIYEAETPYSKTRYHIPQLELARSLFLINSYFCRSCLSSTALQQEFDVQYEVERDH
                     LEIRILPSSSFPKGALEQSAVVQLLVWLFSDQDVMDSYESIFRHYQQNREIKNGVESW
                     CFSFDPPPMQGWKLHVKGRSSNEDKDYLVEEIVGLEINAMLPSTTAISHASFQEKEAG
                     DGSTQHIAVSTESVVDDEHLQLDDEETANIDTDTRVIEAEPTWISFSRPSRIEKSRRA
                     RKSSQTILEKEEATTSENSNLVSTDEPHLGGVLAAADVGGKQDATNYNSIFANRFAAF
                     DELLSILKTKFACRVLFEETLVLPKVGRSRLHLCKDGSPRVIKAVGVQRNGSEFVLLE
                     VDASDGVKMLSTKVLSGVDSETWRNDFEKIRRGVVKSSLNWPNSLFDQLYGQDGHRGV
                     NHPKGLGELQVSREDMEGWAERVVREQFTH"
     gene            complement(7875..9401)
                     /locus_tag="JN001_004327"
     CDS             complement(7875..9401)
                     /locus_tag="JN001_004327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001243518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional antiterminator"
                     /protein_id="HAY9055290.1"
                     /translation="MRNFPVPYSNELIYSTIARAGVYQGIVSPKQLLDEVYGNRKVVA
                     TLGLPSHLGVIARHLHQTGRYAVQQLIYEHTLFPLYAPFVGKERRDEAIRLMEYQAQG
                     AVHLMLGVAASRVKSDNRFRYCPDCVALQLNRYGEAFWQRDWYLPALPYCPKHGALVF
                     FDRAVDDHRHQFWALGHTELLSDYPKDSLSQLTALAAYIAPLLDAPRAQELSPSLEQW
                     TLFYQRLAQDLGLTKSKHIRHDLVAERVRQTFSDEALEKLDLKLAENKDTCWLKSIFR
                     KHRKAFSYLQHSIVWQALLPKLTVIEALQQASALTEHSITTRPVSQSVQPNSEDLSVK
                     HKDWQQLVHKYQGIKAARQSLEGGVLYAWLYRHDRDWLVHWNQQHQQERLAPAPRVDW
                     NQRDRIAVRQLLRIIKRLDSSLDHPRATSSWLLKQTPNGTSLAKNLQKLPLVALCLKR
                     YSESVEDYQIRRISQAFIKLKQEDVELRRWRLLRSATLSKERITEEAQRFLEMVYGEE
                     "
     gene            complement(9404..11071)
                     /locus_tag="JN001_004328"
     CDS             complement(9404..11071)
                     /locus_tag="JN001_004328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001276994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HAY9055291.1"
                     /translation="MSATRIQAVYRDTGVEAYRDNPFIEALPPLQESVNSAASLKSSL
                     QLTSSDLQKSRVIRAHTICRIPDDYFQPLGTHLLLSERISVMIRGGYVGRNPKTGDLQ
                     KHLQNGYERVQTGELETFRFEEARSTAQSLLLIGCSGSGKTTSLHRILATYPQVIYHR
                     ELNVEQVVYLKIDCSHNGSLKEICLNFFRALDRALGSNYERRYGLKRHGIETMLALMS
                     QIANAHALGLLVIDEIQHLSRSRSGGSQEMLNFFVTMVNIIGVPVMLIGTPKAREIFE
                     ADLRSARRGAGFGAIFWDPIQQTQRGKPNQEWIAFTDNLWQLQLLQRKDALLSDEVRD
                     VWYELSQGVMDIVVKLFVLAQLRALALGNERITAGLLRQVYQDELKPVHPMLEALRSG
                     IPERIARYSDLVVPEIDKRLIQLQLDIAAIQEQTPEEKALQELDTEDQRHLYLMLKED
                     YDSSLLIPTIKKAFSQNPTMTRQKLLPLVLQWLMEGETVVSELEKPSKSKKVSAIKVV
                     KPSDWDSLPDTDLRYIYSQRQPEKTMHERLKGKGVIVDMASLFKQAG"
     gene            complement(11068..13176)
                     /locus_tag="JN001_004329"
     CDS             complement(11068..13176)
                     /locus_tag="JN001_004329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000267723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase family protein"
                     /protein_id="HAY9055292.1"
                     /translation="MWQINEVVLFDNDPYRILAIEDGQVVWMQISADKGVPQARAELL
                     LMQYLDEGRLVRTDDPYVHLDLEEPSVDSVSFQKREEDYRKILPIINSKDRFDPKVRS
                     ELVEHVVQEHKVTKATVYKLLRRYWQRGQTPNALIPDYKNSGAPGERRSATGTAKIGR
                     AREYGKGEGTKVTPEIERLFRLTIEKHLLNQKGTKTTVAYRRFVDLFAQYFPRIPQED
                     YPTLRQFRYFYDREYPKAQRLKSRVKAGVYKKDVRPLSSTATSQALGPGSRYEIDATI
                     ADIYLVDHHDRQKIIGRPTLYIVIDVFSRMITGFYIGFENPSYVVAMQAFVNACSDKT
                     AICAQHDIEISSSDWPCVGLPDVLLADRGELMSHQVEALVSSFNVRVESAPPRRGDAK
                     GIVESTFRTLQAEFKSFAPGIVEGSRIKSHGETDYRLDASLSVFEFTQIILRTILFRN
                     NHLVMDKYDRDADFPTDLPSIPVQLWQWGMQHRTGSLRAVEQEQLRVALLPRRKVSIS
                     SFGVNLWGLYYSGSEILREGWLQRSTDIARPQHLEAAYDPVLVDTIYLFPQVGSRVFW
                     RCNLTERSRQFKGLSFWEVWDIQAQEKHNKANAKQDELTKRRELEAFIQQTIQKANKL
                     TPSTTEPKSTRIKQIKTNKKEAVTSERKKRAEHLKPSSSGDEAKVIPFNAVEADDQED
                     YSLPTYVPELFQDPPEKDES"
     gene            complement(13163..13984)
                     /locus_tag="JN001_004330"
     CDS             complement(13163..13984)
                     /locus_tag="JN001_004330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001029679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heteromeric transposase endonuclease subunit
                     TnsA"
                     /protein_id="HAY9055293.1"
                     /translation="MAKANSSFSEVQIARRIKEGRGQGHGKDYIPWLTVQEVPSSGRS
                     HRIYSHKTGRVHHLLSDLELAVFLSLEWESSVLDIREQFPLLPSDTRQIAIDSGIKHP
                     VIRGVDQVMSTDFLVDCKDGPFEQFAIQVKPAAALQDERTLEKLELERRYWQQKQIPW
                     FIFTDKEINPVVKENIEWLYSVKTEEVSAELLAQLSPLAHILQEKGDENIINVCKQVD
                     IAYDLELGKTLSEIRALTANGFIKFNIYKSFRANKCADLCISQVVNMEELRYVAN"
     gene            complement(14144..15973)
                     /gene="glmS"
                     /locus_tag="JN001_004331"
     CDS             complement(14144..15973)
                     /gene="glmS"
                     /locus_tag="JN001_004331"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HAY9055294.1"
                     /translation="MCGIVGAIAQRDVAEILLEGLRRLEYRGYDSAGLAVVDAEGHMT
                     RLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEANAHPHVSEHIMVVHNGII
                     ENHEPLREELKARGYTFVSETDTEVIAHLVNWELKQGGTLREAVLRAIPQLRGAYGTV
                     IMDSRHPDTLLAARSGSPLVIGLGMGENFIASDQLALLPVTRRFIFLEEGDIAEITRR
                     SVNIFDKTGAEVKRQDIESNLQYDAGDKGIYRHYMQKEIYEQPNAIKNTLTGRISHGQ
                     VDLSELGPNADELLSKVEHIQILACGTSYNSGMVSRYWFESLAGIPCDVEIASEFRYR
                     KSAVRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT
                     NAGTEIGVASTKAFTTQLTVLLMLVAKLSRLKGLDASIEHDIVHGLQALPSRIEQMLS
                     QDKRIEALAEDFSDKHHALFLGRGDQYPIALEGALKLKEISYIHAEAYAAGELKHGPL
                     ALIDADMPVIVVAPNNELLEKLKSNIEEVRARGGQLYVFADQDAGFVSSDNMHIIEMP
                     HVEEVIAPIFYTVPLQLLAYHVALIKGTDVDQPRNLAKSVTVE"
     gene            complement(16135..17505)
                     /gene="glmU"
                     /locus_tag="JN001_004332"
     CDS             complement(16135..17505)
                     /gene="glmU"
                     /locus_tag="JN001_004332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HAY9055295.1"
                     /translation="MLNNAMSVVILAAGKGTRMYSDLPKVLHTLAGKAMVQHVIDAAN
                     ELGAAHVHLVYGHGGDLLKQALKDDNLNWVLQAEQLGTGHAMQQAAPFFADDEDILML
                     YGDVPLISVETLQRLRDAKPQGGIGLLTVKLDDPTGYGRITRENGKVTGIVEHKDATD
                     EQRQIQEINTGILISNGADMKRWLAKLTNNNAQGEYYITDIIALAYQEGREIVAVHPQ
                     RLSEVEGVNNRLQLSRLERVYQSEQAEKLLLAGVMLRDPARFDLRGTLTHGRDVEIDT
                     NVIIEGNVTLGHRVKIGTGCVIKNSVIGDDCEISPYTVVEDVNLAAACTIGPFARLRP
                     GAELLEGAHVGNFVEMKKARLGKGSKAGHLTYLGDAEIGDNVNIGAGTITCNYDGANK
                     FKTIIGDDVFVGSDTQLVAPVTVGKGATIAAGTTVTRNVGENALAISRVPQTQKEGWR
                     RPVKKK"
     gene            complement(17856..18275)
                     /gene="atpC"
                     /locus_tag="JN001_004333"
     CDS             complement(17856..18275)
                     /gene="atpC"
                     /locus_tag="JN001_004333"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001251972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HAY9055296.1"
                     /translation="MAMTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLT
                     AIKPGMIRIVKQHGHEEFIYLSGGILEVQSGNVTVLADTAIRGQDLDEARAMEAKRKA
                     EEHISSSHGDVDYAQASAELAKAIAQLRVIELTKKAM"
     gene            complement(18296..19678)
                     /gene="atpD"
                     /locus_tag="JN001_004334"
     CDS             complement(18296..19678)
                     /gene="atpD"
                     /locus_tag="JN001_004334"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017800291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HAY9055297.1"
                     /translation="MATGKIVQVIGAVVDVEFPQDAVPRVYDALEVQNGNERLVLEVQ
                     QQLGGGIVRTIAMGSSDGLRRGLDVKDLEHPIEVPVGKATLGRIMNVLGEPVDMKGEI
                     GEEERWAIHRAAPSYEELSNSQELLETGIKVIDLMCPFAKGGKVGLFGGAGVGKTVNM
                     MELIRNIAIEHSGYSVFAGVGERTREGNDFYHEMTDSNVIDKVSLVYGQMNEPPGNRL
                     RVALTGLTMAEKFRDEGRDVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEM
                     GVLQERITSTKTGSITSVQAVYVPADDLTDPSPATTFAHLDATVVLSRQIASLGIYPA
                     VDPLDSTSRQLDPLVVGQEHYDTARGVQSILQRYQELKDIIAILGMDELSEEDKLVVA
                     RARKIQRFLSQPFFVAEVFTGSPGKYVSLKDTIRGFKGIMEGEYDHLPEQAFYMVGSI
                     EEAVEKAKKL"
     gene            complement(19705..20568)
                     /gene="atpG"
                     /locus_tag="JN001_004335"
     CDS             complement(19705..20568)
                     /gene="atpG"
                     /locus_tag="JN001_004335"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HAY9055298.1"
                     /translation="MAGAKEIRSKIASVQNTQKITKAMEMVAASKMRKSQDRMAASRP
                     YAETMRKVIGHLAHGNLEYKHLYLEDRDVKRVGYLVVSTDRGLCGGLNINLFKKLLAE
                     MKTWTDKGVQCDLAMIGSKGVSFFNSVGGNVVAQVTGMGDNPSLSELIGPVKVMLQAY
                     DEGRLDKLYIVSNKFINTMSQVPTISQLLPLPASDDDDLKHKSWDYLYEPDPKALLDT
                     LLRRYVESQVYQGVVENLASEQAARMVAMKAATDNGGSLIKELQLVYNKARQASITQE
                     LTEIVSGAAAV"
     gene            complement(20619..22160)
                     /gene="atpA"
                     /locus_tag="JN001_004336"
     CDS             complement(20619..22160)
                     /gene="atpA"
                     /locus_tag="JN001_004336"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001176751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HAY9055299.1"
                     /translation="MQLNSTEISELIKQRIAQFNVVSEAHNEGTIVSVSDGVIRIHGL
                     ADCMQGEMISLPGNRYAIALNLERDSVGAVVMGPYADLAEGMKVKCTGRILEVPVGRG
                     LLGRVVNTLGAPIDGKGPLDHDGFSAVEAIAPGVIERQSVDQPVQTGYKAVDSMIPIG
                     RGQRELIIGDRQTGKTALAIDAIINQRDSGIKCIYVAIGQKASTISNVVRKLEEHGAL
                     ANTIVVVATASESAALQYLAPYAGCAMGEYFRDRGEDALIIYDDLSKQAVAYRQISLL
                     LRRPPGREAFPGDVFYLHSRLLERAARVNAEYVEAFTKGEVKGKTGSLTALPIIETQA
                     GDVSAFVPTNVISITDGQIFLETNLFNAGIRPAVNPGISVSRVGGAAQTKIMKKLSGG
                     IRTALAQYRELAAFSQFASDLDDATRKQLDHGQKVTELLKQKQYAPMSVAQQSLVLFA
                     AERGYLADVELSKIGSFEAALLAYVDRDHAPLMQEINQTGGYNDEIEGKLKGILDSFK
                     ATQSW"
     gene            complement(22173..22706)
                     /gene="atpH"
                     /locus_tag="JN001_004337"
     CDS             complement(22173..22706)
                     /gene="atpH"
                     /locus_tag="JN001_004337"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015966593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HAY9055300.1"
                     /translation="MSEFITVARPYAKAAFDFAVEHQSVERWQDMLAFAAEVTKNEQM
                     AELLSGALAPETLAESFIAVCGEQLDENGQNLIRVMAENGRLNALPDVLEQFIHLRAV
                     SEATAEVDVISAAALSEQQLAKISAAMEKRLSRKVKLNCKIDKSVMAGVIIRAGDMVI
                     DGSVRGRLERLADVLQS"
     gene            complement(22721..23191)
                     /gene="atpF"
                     /locus_tag="JN001_004338"
     CDS             complement(22721..23191)
                     /gene="atpF"
                     /locus_tag="JN001_004338"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001052215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HAY9055301.1"
                     /translation="MNLNATILGQAIAFVLFVLFCMKYVWPPLMAAIEKRQKEIADGL
                     ASAERAHKDLDLAKASATDQLKKAKAEAQVIIEQANKRRSQILDEAKAEAEQERTKIV
                     AQAQAEIEAERKRAREELRKQVAILAVAGAEKIIERSVDEAANSDIVDKLVAEL"
     gene            complement(23253..23492)
                     /gene="atpE"
                     /locus_tag="JN001_004339"
     CDS             complement(23253..23492)
                     /gene="atpE"
                     /locus_tag="JN001_004339"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004246596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HAY9055302.1"
                     /translation="MENLNMDLLYMAAAVMMGLAAIGAAIGIGILGGKFLEGAARQPD
                     LIPLLRTQFFIVMGLVDAIPMIAVGLGLYVMFAVA"
     gene            complement(23539..24354)
                     /gene="atpB"
                     /locus_tag="JN001_004340"
     CDS             complement(23539..24354)
                     /gene="atpB"
                     /locus_tag="JN001_004340"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005121454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HAY9055303.1"
                     /translation="MASENMTPQDYIGHHLNNLQLDLRTFSLVDPQNPPATFWTINID
                     SMFFSVVLGLLFLVLFRSVAKKATSGVPGKFQTAIELVIGFVNGSVKDMYHGKSKLIA
                     PLALTIFVWVFLMNLMDLLPIDLLPYIAEHVLGLPALRVVPSADVNVTLSMALGVFIL
                     ILFYSIKMKGIGGFTKELTLQPFNHWAFIPVNLILEGVSLLSKPVSLGLRLFGNMYAG
                     ELIFILIAGLLPWWSQWILNVPWAIFHILIITLQAFIFMVLTIVYLSMASEEH"
     gene            complement(24363..24743)
                     /gene="atpI"
                     /locus_tag="JN001_004341"
     CDS             complement(24363..24743)
                     /gene="atpI"
                     /locus_tag="JN001_004341"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418195.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit I"
                     /protein_id="HAY9055304.1"
                     /translation="MSVSLVSRNVARKLLLVQLLVVIASGLLFSLKDPFWGVSAISGG
                     LAVFLPNVLFMIFAWRHQAHTPAKGRVAWTFAFGEAFKVLAMLVLLVVALAVLKAVFL
                     PLIVTWVLVLVVQILAPAVINNKG"
     gene            complement(25360..25983)
                     /gene="rsmG"
                     /locus_tag="JN001_004342"
     CDS             complement(25360..25983)
                     /gene="rsmG"
                     /locus_tag="JN001_004342"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HAY9055305.1"
                     /translation="MLNKLSLLLKDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVR
                     DPNEMLVRHILDSIVVAPYLQGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRV
                     RFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAFASLNDMVSWCHHLPGEQGR
                     FYALKGQMPEDEIALLPEEYQVESVVKLQVPALDGERHLVVIKANKI"
     gene            complement(26047..27936)
                     /gene="mnmG"
                     /locus_tag="JN001_004343"
     CDS             complement(26047..27936)
                     /gene="mnmG"
                     /locus_tag="JN001_004343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000499793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HAY9055306.1"
                     /translation="MFYPDPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQ
                     MSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRV
                     LYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTFLD
                     GKIHIGLDNYSGGRAGDPPSIPLSRRLRELPLRVGRLKTGTPPRIDARTIDFSVLAQQ
                     HGDNPMPVFSFMGNASQHPQQVPCYITHTNEKTHDVIRSNLDRSPMYAGVIEGVGPRY
                     CPSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENA
                     KIVRPGYAIEYDFFDPRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAA
                     RLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTE
                     IGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAEAAAEVNAHLTAPLSREAS
                     GEDLLRRPEMTYEKLTTLTPFAPALTDEQAAEQVEIQVKYEGYIARQQDEIEKQLRNE
                     NTLLPATLDYRQVSGLSNEVIAKLNDHKPASIGQASRISGVTPAAISILLVWLKKQGM
                     LRRSA"
     gene            complement(28315..28758)
                     /gene="mioC"
                     /locus_tag="JN001_004344"
     CDS             complement(28315..28758)
                     /gene="mioC"
                     /locus_tag="JN001_004344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein MioC"
                     /protein_id="HAY9055307.1"
                     /translation="MADITLISGSTLGGAEYVAEHLAEKLEEAGFTTETLHGPLLEDL
                     SASGIWLIISSTHGAGDIPDNLSPFYEALQEQKPDLSAVRFGAIGIGSREYDTFCGAI
                     DKLEAELKNSGAKQTGETLKINILDHDIPEDPAEEWLGSWINLLK"
     gene            complement(28848..29306)
                     /gene="asnC"
                     /locus_tag="JN001_004345"
     CDS             complement(28848..29306)
                     /gene="asnC"
                     /locus_tag="JN001_004345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator AsnC"
                     /protein_id="HAY9055308.1"
                     /translation="MENYLIDNLDRGILEALMGNARTAYAELAKQFGVSPGTIHVRVE
                     KMKQAGIITGARIDVSPKQLGYDVGCFIGIILKSAKDYPSALAKLESLDEVTEAYYTT
                     GHYSIFIKVMCRSIDALQHVLINKIQTIDEIQSTETLIVLQHPIMRTIKP"
     gene            29458..30450
                     /gene="asnA"
                     /locus_tag="JN001_004346"
     CDS             29458..30450
                     /gene="asnA"
                     /locus_tag="JN001_004346"
                     /EC_number="6.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--ammonia ligase"
                     /protein_id="HAY9055309.1"
                     /translation="MKTAYIAKQRQISFVKSHFSRQLEERLGLIEVQAPILSRVGDGT
                     QDNLSGCEKAVQVKVKALPDAQFEVIHSLAKWKRQTLGQHDFSAGEGLYTHMKALRPD
                     EDRLSPLHSVYVDQWDWERVMGDGERQFSTLKSTVEAIWAGIKATEAAVSEEFGLAPF
                     LPDQIHFVHSQELLSRYLDLDAKGRERAIAKDLGAVFLVGIGGKLSDGHRHDVRAPDY
                     DDWSTPSELGHAGLNGDILVWNPVLEDAFELSSMGIRVDADTLKHQLALTGDEDRLQL
                     EWHQALLRGEMPQTIGGGIGQSRLTMLLLQLPHIGQVQCGVWPAAVRESVPSLL"
     gene            complement(30455..31906)
                     /gene="viaA"
                     /locus_tag="JN001_004347"
     CDS             complement(30455..31906)
                     /gene="viaA"
                     /locus_tag="JN001_004347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_312714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA stimulator ViaA"
                     /protein_id="HAY9055310.1"
                     /translation="MLTLDTLNVMLAVSEEGLIEEMIIALLASPQLAVFFEKFPRLKA
                     AITDDVPRWSEALRSRLKDARVPPELTEEVMCYQQSQLLSTPQFIVQLPQILDLLHRL
                     NSPWAEQARQLVDANSTITSALHTLFLQRWRLSLIVQATTLNQQLLEEEREQLLSEVQ
                     ERMTLSGQLEPILADNNTAAGRLWDMSAGQLKRGDYQLIVKYGEFLNEQPELKRLAEQ
                     LGRSREAKSIPRNDAQMETFRTMVREPATVPEQVDGLQQSDDILRLLPPELATLGITE
                     LEYEFYRRLVEKQLLTYRLHGESWREKVIERPVVHKDYDEQPRGPFIVCVDTSGSMGG
                     FNEQCAKAFCLALMRIALAENRRCYIMLFSTEIVRYELSGPQGIEQAIRFLSQQFRGG
                     TDLASCFRAIMERLQSREWFDADAVVISDFIAQRLPDDVTSKVKELQRVHQHRFHAVA
                     MSAHGKPGIMRIFDHIWRFDTGMRSRLLRRWRR"
     gene            complement(31900..33396)
                     /gene="ravA"
                     /locus_tag="JN001_004348"
     CDS             complement(31900..33396)
                     /gene="ravA"
                     /locus_tag="JN001_004348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418202.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase RavA"
                     /protein_id="HAY9055311.1"
                     /translation="MAHPHLLAERISRLSSSLEKGLYERSHAIRLCLLAALSGESVFL
                     LGPPGIAKSLIARRLKFAFQNARAFEYLMTRFSTPEEVFGPLSIQALKDEGRYERLTS
                     GYLPEAEIVFLDEIWKAGPAILNTLLTAINERQFRNGAHVEKIPMRLLVAASNELPEA
                     DSSLEALYDRMLIRLWLDKVQDKANFRSMLTSQQDENDNPVPDALQVTDEEYERWQKE
                     IGEITLPDHVFELIFMLRQQLDKLPDAPYVSDRRWKKAIRLLQASAFFSGRSAVAPVD
                     LILLKDCLWYDAQSLNLIQQQIDVLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKT
                     ALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLS
                     KGGEIRGKLNGIGFAQKLNLEVDSTQHLVVRDVSLQGSTLALPGSSAEGLPGEIKQQL
                     EELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQC"
BASE COUNT         8541 a         8473 c         7831 g         8710 t
ORIGIN      
        1 aaagagccag tcagttgctt aactgactgg cattacaccg gtcggcagcc ctgtgggcgg
       61 acaaaatagt tgggaactgg gaggggtgga aatggagttt ttaaggatta tttagggaag
      121 agtgacaaaa tagatgggaa ctgggtgtag cgtcgtaagc taatacgaaa attaaaaatg
      181 acaaaatagt ttggaactag atttcactta tctggttaac taatctagct aacctgccgc
      241 tcagcttagt acgatcctat atccaactga tcataatcct ttcatcagta tcccaaatta
      301 aatccccctc ctagactgcc tcaccaacac tttacagtga tcccgtattt ccggacaggt
      361 gattgatttt tttcgcttgt acaggtgtta agccacagtt atcttgatgt ggacattatg
      421 cattgtaata gcccattaac atgcgctaag agcataaatt aatatacagt aacaagcatt
      481 acgaggtgct aatgtttgga aagcagcctc ttccaactac aataataagt taactatcct
      541 ccacccacaa ataattacaa atgacccctt tccgctataa ctccgatctc accagcggct
      601 cgctacaaac ccgagagtgt cgcattatta ctggcttgtt actccaagag cttgatgaag
      661 ctgcctggga taaagccatg tataaggaaa atgtgcttca gaaacgcacg caatctacgg
      721 taagacgtat ttcttcagcg cttagaaaac gcctagaaca cctaagctct gacttttggg
      781 cttttgcgtt tttatgttag gcattgtctg gcaactggag gaagtgtaat gaccatgaat
      841 ggtcactgtg attgacagta tcttgcttaa acttatctga acaatggtag aactggctca
      901 tatttatccc ctctatgatt gtttatcttt ttcaccataa aaagtatcag gggctactca
      961 gggctacata aagatattta tctactttta ctgattgata agtagcatca gtccatccgc
     1021 aggactggtg gtgccggcaa aatgctgacc caacacatgc gtatagattt gcgtggtctt
     1081 aacatcgtta tgccctaaga gttcttgcac agtgcgaata tcacgccccg cttgtaatag
     1141 atgcgtagca aacgagtgac gaaatgtatg acaagtgaca cgcttgctaa cgatgcctgc
     1201 tttttgtacg gctgccttca atgcctttcg cgcaacggag tcatgcagat gatggcggca
     1261 taatttgccg ttatacgggt ggttgcagag cgtgctggag ggaaagacaa acatccacgc
     1321 cgcttgtcga taagcagaag ggtatttgtg atctaaagca aaaggcagcg atggccctac
     1381 gccttgtaag ttgtcgtctt gctgaataag ccgcgcttgc tcaatgagtt attttattgc
     1441 tgggattagg cgcgtgggca gtaggctgtt tctgcttttc ccacccttac cgtcatgcac
     1501 agtgatgcag ccattatcaa aatcaaaatc tttaacccgc aaacgcaagc attcattaat
     1561 gcgcaaacct gcaccataca gcagcgtaaa aataacttgg ttgcgagtat ccataacctg
     1621 caaaatgcgt tgcacttcat ttgcagagat aacagagggt agccgtctag gcttgcttgc
     1681 agggatataa tcaatatcgc ccaacggctg ttgtaaaaac ctgttgtaca aaaaagctag
     1741 ggcatttaaa gcgattttct gcgtgtttat ggctacatgt ctgctgtttg ctaagctgga
     1801 taaaaacagc ctgacctctt cactgcccat ggtctgagga tgacgttttt tgtgaaacag
     1861 aataaaacgc ttaatccagt gcaggtaagt tttttcagtt ttcagcgcat aacctttttg
     1921 tcgcatatcc gtgcgtatag aatttaaaaa tggactgtta gacataaaac gctccttgtc
     1981 ttgcaactgt ctgcctatac agcctattct agctgggatt taaaaaagtg cctgtttttt
     2041 acgcctagag atgcttgttt accggtagag ttttaattta atgctaaata aattaaaatg
     2101 ttatgagttc tttgggtgag ataatgtgca tcgtgcaagc aggatagacg gcatgcacga
     2161 tttgtaataa cagagtgtct tgtattttta aagaaagtct atttaataca agtgattata
     2221 ttaattaacg gtaagcatca gcgggtgaca aaacgagcat gcttactaat aaaatgttaa
     2281 cctctgagga agaattgtga aactatcact aatggtagct atatcgaaga atggagttat
     2341 cgggaatggc cctgatattc catggagtgc caaaggtgaa cagctcctgt ttaaagctat
     2401 tacctataac caatggctgt tggttggacg caagactttt gaatcaatgg gagcattacc
     2461 caaccgaaag tatgcggtcg taacacgttc aagttttaca tctgacaatg agaacgtatt
     2521 gatctttcca tcaattaaag atgctttaac caacctaaag aaaataacgg atcatgtcat
     2581 tgtttcaggt ggtggggaga tatacaaaag cctgatcgat caagtagata cactacatat
     2641 atctacaata gacatcgagc cggaaggtga tgtttacttt cctgaaatcc ccagcaattt
     2701 taggccagtt tttacccaag acttcgcctc taacataaat tatagttacc aaatctggca
     2761 aaagggttaa caagtggcag caacggattc gcaaacctgt cacgcctttt gtaccaaaag
     2821 ccgcgccagg tttgcgatcc gctgtgccag gcgttaggcg tcatatgaag atttcggtga
     2881 tccctgagca ggtggcggaa acattggatg ctgagaacca tttcattgtt cgtgaagtgt
     2941 tcgatgtgca cctatccgac caaggctttg aactatctac cagaagtgtg agcccctacc
     3001 ggaaggatta catctcggat gatgactctg atgaagactc tgcttgctat ggcgcattca
     3061 tcgaccaaga gcttgtcggg aagattgaac tcaactcaac atggaacgat ctagcctcta
     3121 tcgaacacat tgttgtgtcg cacacgcacc gaggcaaagg agtcgcgcac agtctcatcg
     3181 aatttgcgaa aaagtgggca ctaagcagac agctccttgg catacgatta gagacacaaa
     3241 cgaacaatgt acctgcctgc aatttgtacg caaaatgtgg ctttactctc ggcggcattg
     3301 acctgttcac gtataaaact agacctcaag tctcgaacga aacagcgatg tactggtact
     3361 ggttctcggg agcacaggat gacgcctaac aattcattca agccgacacc gcttcgcggc
     3421 gcggcttaat tcaggagtta aacatcatga gggaagcggt gatcgccgaa gtatcgactc
     3481 aactatcaga ggtagttggc gtcatcgagc gccatctcga accgacgttg ctggccgtac
     3541 atttgtacgg ctccgcagtg gatggcggcc tgaagccaca cagtgatatt gatttgctgg
     3601 ttacggtgac cgtaaggctt gatgaaacaa cgcggcgagc tttgatcaac gaccttttgg
     3661 aaacttcggc ttcccctgga gagagcgaga ttctccgcgc tgtagaagtc accattgttg
     3721 tgcacgacga catcattccg tggcgttatc cagctaagcg cgaactgcaa tttggagaat
     3781 ggcagcgcaa tgacattctt gcaggtatct tcgagccagc cacgatcgac attgatctgg
     3841 ctatcttgct gacaaaagca agagaacata gcgttgcctt ggtaggtcca gcggcggagg
     3901 aactctttga tccggttcct gaacaggatc tatttgaggc gctaaatgaa accttaacgc
     3961 tatggaactc gccgcccgac tgggctggcg atgagcgaaa tgtagtgctt acgttgtccc
     4021 gcatttggta cagcgcagta accggcaaaa tcgcgccgaa ggatgtcgct gccgactggg
     4081 caatggagcg cctgccggcc cagtatcagc ccgtcatact tgaagctagg caggcttatc
     4141 ttggacaaga agatcgcttg gcctcgcgcg cagatcagtt ggaagaattt gttcactacg
     4201 tgaaaggcga gatcaccaag gtagtcggca aataatgtct aacaattcgt tcaagccgac
     4261 gccgcttcgc ggcgcggctt aactcaagcg ttagagagct ggggaagact atgcgcgatc
     4321 tgttgaaggt ggttctaagc ctcgtacttg cgatggcatc ggggcaggca cttgctgacc
     4381 tgccaattgt tttagtggat gaagctcgtc ttccctatga ctactcccca tccaactacg
     4441 acatttctcc aagcaactac gacaactcca taagcaatta cgacaatagt ccatcaaatt
     4501 acgacaactc tgagagcaac tacgataata gttcatccaa ttacgacaat agtcgcaacg
     4561 gaaatcgtag gcttatatat agcgcaaatg ggtctcgcac tttcgccggc tactacgtca
     4621 ttgccaacaa tgggacaacg aacttctttt ccacatctgg caaaaggatg ttctacaccc
     4681 caaaaggggg gcgcggcgtc tatggcggca aagatgggag cttctgcggg gcattggtcg
     4741 tcataaatgg ccaattttcg cttgccctga cagataacgg cctgaagatc atgtatctaa
     4801 gcaactagcc tgctctctaa taaaatgtta ggcctcaaca tctagtcgca agctgagggg
     4861 aaccactagt gtcatacgaa cctccaagag acggttacac aaacgggtac attgttgatg
     4921 tcatgtatga caatcgccca agtaagtatc cagctgtgtt cagaacgtac gtccgaattc
     4981 cagactatgt cgaactagat aacgcggagg agctggccga cgcaatcatt cgagaggttg
     5041 agttaaagga ggcatggctc acaagggtct tggggaactc agccgatcct gacgcttctg
     5101 tgggcaagtg ggaccggcgc ctagcgcagt gcggtggtat tgatgagatg tcaagtgggg
     5161 tgcaggcaac atacttcagt ccaaacggtc agctggtcgg cttagtggca tacattgatg
     5221 ccgaatggat ggatgaatag ctctgacgtt acgattcagg tgagacaacc agatgggcat
     5281 tgcgtacaag ctcagttgcc accgatgtgg ctacgagtct gatcttcttt acctaggcca
     5341 aggtatggcg atgcttcctg agcaaatagt cggaacgtgc acatgctgcg acaatctaac
     5401 gacgatttct ataaatgaaa gctacggagt atgctcactt tgtggggcta aggatcgtgt
     5461 gatatttaca agctatcagc atgaggcaag gccaagaaat ccctgctatc tagagagaag
     5521 tttcaaatat caatgcccaa gatgccatgc cttcagtatg gagcctccgg atctaccgga
     5581 gatgctttgg gactaatgct ccgctttgcc tcgggtatcc gttcgaccta tgtttaagag
     5641 gaaacgcacg tgtctgccgc caaagctctt gcctatgcac tttgtgacaa gttggaaagc
     5701 aaaaaagttg atgaagtcgt acgaaatctt gtttctagcg gctggaatat tagggaagtg
     5761 gcctgggaag cttcgtcctt tgatcatgaa atgccctact ttgacacggg gcgggacttc
     5821 gatattggat ttcctgacac gctgtcatcc aagattgagt ttttgaccgc gaatggatca
     5881 atcgtccaag cacgtgctcg cctgcacttc aagcaggctc taatttttgc caaggcgtcc
     5941 aaacatgtcg ccgcgctcaa gaactcattg gattactact atggatcgtc tgtaatcccc
     6001 cctcaaaacc acggaggcta tttgtagaaa attccattaa tatgaactca aggtgttccc
     6061 tacggacgaa tcagcgatga aggtggtgta cctggctatc caggcggcga ccaagaaatg
     6121 gacgatgccg atccgcaact ggaagccggc catgaaccgt tttatgatcg aatttggtga
     6181 ccgtttaaat ggccaccttt aactgaccgg caaaagcact tacacaaaag ggtttacagg
     6241 ctctttcagt cattccttta atgcgtaaat tgctctctaa ccactctctc agcccaccct
     6301 tccatatcct ctctcgatac ttgcagctcc cccaacccct ttggatgatt cacccctcta
     6361 tgcccgtctt gtccatataa ttgatcaaac aaactatttg gccaattcaa tgagctcttc
     6421 accactccac gccgtatctt ttcaaaatca ttccgccatg tttcgctatc aacgccactc
     6481 aacactttgg tagaaagcat tttcacccca tccgatgcat ccacctctag caatacaaat
     6541 tcactgccat tacgttgcac cccaacggct ttaatcactc ttggtgagcc atctttacac
     6601 agatgtaatc ggctacgccc aacttttggc aaaaccaagg tttcttcaaa aagcacccga
     6661 catgcaaatt tagtttttag aattgaaagt agctcatcaa aagcagcaaa tcgattagca
     6721 aaaatagagt tgtaattggt tgcatcctgc ttcccaccca catctgccgc tgctaggaca
     6781 ccacctaagt gtggctcatc agtactaacc aaattactat tttcacttgt tgttgcttct
     6841 tctttttcta aaatagtttg gctacttttt cttgccctgc gagatttttc aattcgacta
     6901 ggtctactaa aacttatcca tgtcggctca gcctctatga ctcgtgtgtc tgtgtctata
     6961 ttggctgttt cctcatcgtc caactgtaga tgctcatcat caacaactga ctctgttgaa
     7021 accgctatgt gctgcgtact accatcacct gcctcctttt cctgaaaaga ggcatggcta
     7081 atagctgttg tgctaggaag catagcgttg atttctaaac ctactatttc ctcaactaaa
     7141 taatccttat cctcgttaga agaacgtcct tttacatgta atttccaacc ctgcatgggc
     7201 ggagggtcaa agctaaagca ccagctttca acgccgttct taatttctct attttgttga
     7261 tagtgcctaa aaatactttc atacgaatcc ataacatctt gatccgaaaa caaccaaacc
     7321 aaaagctgca ctacggccga ctgctctaac gcccctttag gaaacgatga actgggtaag
     7381 atccttatct ctaaatgatc tcgctcaacc tcatactgaa cgtcgaactc ttgctgtaaa
     7441 gcggtactgc tcaaacagct tcgacagaaa taggagttaa ttaaaaataa tgaccgagct
     7501 agctctaact gtgggatgtg ataacgagtc ttgctatatg gtgtttcagc ttcgtaaata
     7561 aatgaactct gcgctccatc cttgttgcgt acggaagcaa aggacgagag attaggaaaa
     7621 tcgattattt tggctcgttg aagatccgat gcttcaaact caatcacacg atccgcctta
     7681 tttatttgct ttgttgtact gttaaccacc ttagctcgac ttaataaagg caaatgagta
     7741 aatcgagtcc atttccgttc ttgcattgga ttaaaccaaa caaaaatacg ccactcctta
     7801 tgacccgagt tacggaataa atgaccaata tgtacaacct gcacattgtc attaaatgta
     7861 gctagcctaa ccactcactc ttccccataa accatttcca agaatctttg tgcttcctca
     7921 gttatccgct ctttagataa cgttgcactt cttaataatc gccagcgcct aagctcaaca
     7981 tcttcctgtt taagcttaat aaaagcttgg ctaatccgtc taatttgata atcttccaca
     8041 ctctctgagt aacgctttaa gcaaagcgct accaaaggca gtttctgtag attttttgca
     8101 agagaggttc cgttaggagt ttgctttaac agccagctcg atgtcgctct tgggtgatca
     8161 aggctactat ctagacgctt tatgattctt aatagttgtc gtacagcaat tcgatctctt
     8221 tggttccaat caactctagg ggcgggtgcc agacgctctt gttgatgctg ttgattccag
     8281 tgaactagcc aatccctgtc atgtcggtaa agccaagcgt atagcacccc accctctaaa
     8341 gactgtcttg ccgccttaat tccttggtat ttatgcacta gttgctgcca gtctttatgc
     8401 ttaacagata aatcttcaga gttaggttgc acagactggc taacaggtct tgtcgttata
     8461 gagtgctcag taagagcact tgcctgctgt agcgcttcta taaccgttag ttttggcaat
     8521 aaggcttgcc acacaatact atgctgtaaa taactaaagg cttttctatg cttacggaat
     8581 atacttttca gccaacacgt gtccttgttc tctgccaact ttaaatccag tttctctagt
     8641 gcctcatcac taaaagtctg cctcactctc tccgccacca agtcatgacg aatgtgcttg
     8701 cttttggtta gccctagatc ctgcgctaag cgctgataaa acagcgtcca ctgctcaagg
     8761 cttggggaaa gctcttgcgc tcgtggagca tctaacagag gggctatata agcagctagt
     8821 gctgttaatt gagataggga gtctttgggg tagtctgaaa gcagctcagt atgacccaaa
     8881 gcccaaaatt gatgtcggtg atcatctaca gctctatcaa agaagactaa agcaccgtgt
     8941 tttggacaat atggcaaagc gggcaaatac caatctcgtt gccaaaaggc ttccccatac
     9001 ctatttagct gaagagcaac gcaatcaggg cagtatctaa agcggttatc gctcttaact
     9061 ctagaagcag cgactcctag cattaaatgc accgcacctt gcgcttggta ctccattaac
     9121 cgaatagctt cgtctcggcg ctccttgcct acaaacggag catataaagg gaataaggta
     9181 tgctcataaa taagctgctg aacagcgtaa cgtcctgttt gatgtagatg tcttgctatc
     9241 acacctaaat gcgagggcag acctaaggta gcgaccacct tgcggttgcc atacacctca
     9301 tccaacagct gcttaggact aacaatccct tgataaacgc ctgcccgtgc aatagtgcta
     9361 taaatcagct cattcgagta cggaacagga aagtttctca tggctaacct gcttgtttaa
     9421 ataagctcgc catatccact attacccctt tcccttttaa ccgttcatgc atggtttttt
     9481 caggttggcg ttgtgaatag atataacgta aatccgtatc aggcaagcta tcccagtcgc
     9541 tgggcttgac tacctttata gccgaaacct ttttactctt ggagggcttt tctagttctg
     9601 acactaccgt ttcgccttcc atcaaccact gcaaaacaag aggcagtaac ttttgtcttg
     9661 tcatcgttgg attctggcta aacgcttttt taatagtggg aattaacagg cttgaatcgt
     9721 aatcctcttt cagcatcaga tataaatgac gctgatcttc ggtatctaac tcttgaaggg
     9781 ctttttcttc tggtgtttgt tcttgtatcg ctgcgatatc tagctgaagt tggattaacc
     9841 gtttatcaat ctcgggaacg actagatcag aataacgagc aatgcgttct gggatacccg
     9901 agcgtaatgc ctctagcatg gggtgcacag gctttaactc atcttgatac acttgccgca
     9961 ataaaccagc ggtaatacgc tcattgccta aagctagcgc acggagctga gcgagtacaa
    10021 aaagttttac tacaatgtcc atcactcctt ggcttagctc ataccacaca tcacggacct
    10081 catccgataa cagcgcatct ttgcgttgta aaagctgtaa ttgccaaaga ttatccgtaa
    10141 aagcgatcca ctcttgattg ggctttccac gttgcgtttg ttgtatagga tcccagaata
    10201 tagctccaaa ccctgcccct ctacgtgcag accgcaaatc agcctcaaaa atctctcgtg
    10261 ctttaggggt accaatcaac atcactggta cgccaataat attcaccatc gtcacaaaaa
    10321 agttcagcat ctcttgagat ccacccgaac gagagcggct taaatgctga atttcatcaa
    10381 taaccaacaa ccctaaagca tgtgcattgg ctatttgcga catcaaagcc aacatggttt
    10441 ctataccatg acgttttaag ccataacgac gctcatagtt cgagcccaag gctcgatcca
    10501 acgctctgaa aaaattcaag cagatttctt ttagcgaacc attatgcgag cagtctattt
    10561 tcaaatacac cacctgctct acattgagtt cacgatggta aatcacctga ggatacgtgg
    10621 ctagaatacg atgaagagag gtcgtcttcc cactaccaga acaaccaatt aacaataagc
    10681 tttgtgccgt agatcgtgcc tcctcaaagc gaaatgtctc caactctccc gtttgaacac
    10741 gctcataacc attttgtaaa tgcttttgta aatctcctgt tttaggattt ctgcctacgt
    10801 agccacctcg aatcatgacc gaaatacgct cacttagtag caaatgcgta cctaatggct
    10861 gaaaatagtc atctggaata cgacaaatgg tatgagctct gataacacgg gacttttgca
    10921 agtcagagga agtaagctgt aaagaggatt tcagtgatgc agcactattc actgactctt
    10981 gtaatggtgg taaggcctcg ataaaaggat tatcacgata agcctctacc cccgtatcac
    11041 gataaactgc ttgaatccgg gtagcactca tgactcatcc ttttctggtg gatcctgaaa
    11101 taattcaggc acgtatgtgg gtaggctgta atcttcttga tcatccgctt ccactgcgtt
    11161 gaaaggaata actttagcct catcacctga agagcttggc ttcaaatgct ccgcacgttt
    11221 tttacgctcc gaggtcacgg cttctttttt attagtttta atctgcttaa tgcgtgttga
    11281 tttgggctca gtagtactgg gcgttaactt attcgctttc tgaatggttt gctgaataaa
    11341 cgcctcaagc tccctgcgtt tagttaactc atcctgcttc gcattggctt tattgtgttt
    11401 ttcttgtgct tgtatatccc aaacctccca aaatgagaga cctttaaact gccgactacg
    11461 ttccgtcaga ttacagcgcc aaaatacacg gctgccaact tgcggaaaca aataaatcgt
    11521 atcaaccagc actgggtcat aagccgcttc taaatgttga ggtctagcta tatcagtgct
    11581 ccgctgcaac caaccctcac gcagaatctc tgaccccgag taatacaaac cccacaaatt
    11641 aacgccaaat gaagaaatag agacctttcg gcgaggcagt aacgctactc gcaactgctc
    11701 ttgctccaca gcccttaaac tacctgtacg atgctgcata ccccattgcc atagctggac
    11761 aggaatagac ggtaaatctg taggaaaatc agcatctcga tcgtatttat ccatcaccag
    11821 atggttattt ctgaataaga tcgtacgcaa aataatttgt gtgaactcaa ataccgacag
    11881 agatgcatct aacctatagt ctgtttcacc atggcttttg atccgactgc cctctacaat
    11941 gccaggtgca aaggacttaa actcggcttg tagtgttcta aaagtgcttt ccactatgcc
    12001 tttagcatcg ccacgtctag gtggagcact ttccactcgc acattaaaac tagaaactaa
    12061 ggcttcgacc tgatgactca ttaattcgcc acggtccgct agcaacacat ctggcaaacc
    12121 tacacacggc cagtctgagc tactaatctc aatatcatgc tgggcacaaa tggccgtttt
    12181 gtcagagcaa gcatttacaa aagcctgcat cgccaccaca taagacggat tttcaaagcc
    12241 gatataaaag cccgtgatca tccgactaaa cacatcaatc acaatgtaaa gcgttggtct
    12301 tcctatgatt ttttggcgat catgatgatc cactaaataa atatcagcaa tcgtggcatc
    12361 aatctcataa cgactcccag ggcctaacgc ctgagaagtg gctgtactac ttaagggtcg
    12421 tacgtctttt ttatataccc ctgctttaac tctagacttt aagcgctgag ctttagggta
    12481 ttctcgatca taaaaataac gaaactgacg tagtgttggg taatcctctt ggggaatgcg
    12541 aggaaaatac tgagcaaaca agtccacaaa tcgtctatag gcaacggtgg tctttgtacc
    12601 tttttgattt aacaggtgct tttctatggt caacctaaaa aggcgttcaa tctcgggcgt
    12661 taccttggtt ccttcaccct taccatattc tctggctcgg ccaatctttg ctgttcctgt
    12721 cgctgaacgt ctttcccctg gtgcaccgct gtttttgtag tcaggaatta atgcattagg
    12781 cgtttgacca cgctgccagt aacggcgtaa caacttataa actgtagcct tagtaacctt
    12841 atgttcttgg accacatgct caacgagttc gcttctgact ttagggtcga aacgatcctt
    12901 actattaata ataggaagaa tttttcgata atcctcctcg cgcttctgga agctgacaga
    12961 atctacagac ggctcttcta aatcaagatg tacataaggg tcatcagttc taactaagcg
    13021 gccttcatct aaatactgca ttagcaacaa ctcagcccta gcttgtggaa ctcctttatc
    13081 agcgcttatt tgcatccaga caacttggcc atcctctata gccaaaatgc gatacggatc
    13141 attatcaaat agcacaacct cattaatttg ccacatagcg caactcctcc atattcacta
    13201 cttggctaat acagagatct gcacacttat ttgccctgaa agacttataa atattgaact
    13261 taataaaacc atttgcggtt aaggctcgta tctcactcaa tgttttgcct aactccaaat
    13321 cataagcaat atcaacctgc ttacagacat tgataatgtt ttcatctcct ttttcttgca
    13381 ggatatgggc caatggggat agttgtgcta aaagctccgc agaaacttct tctgttttca
    13441 ctgaataaag ccattcaata ttttctttta ctacgggatt tatttcttta tcagtaaaaa
    13501 tgaaccaagg aatttgcttt tgctgccaat agcgacgctc tagttctagt ttttctaagg
    13561 tacgctcgtc ttgtaaggct gctgcaggtt tgacttgaat agcaaactgc tcaaaaggac
    13621 catctttgca gtccactaaa aaatcagtag acataacctg atctacacca cgaataacag
    13681 gatgcttaat accactatct attgcaatct gcctggtatc actaggtaat aaggggaact
    13741 gctcgcgtat atctagcacg ctgctctccc actcaagact gagaaaaaca gcaagctcta
    13801 agtcagatag caaatgatgg actcgtcccg tcttatgaga ataaatacgg tgggaacgac
    13861 ctgaagaagg aacttcttgt actgttagcc atggaatata gtctttacca tgcccttggc
    13921 cacgcccctc tttaatacga cgggcaattt gcacttcaga aaatgaagag tttgctttag
    13981 ccataacaaa agtccagtat gctttttcac agcataactg gactgatttc agtttacaac
    14041 tattctgtct agtttaagac tttattgtca tagtttagat ctattttgtt cagtttaaga
    14101 ctttattgtc cgcccacaag ccctttttta tctatgatag tgattactca accgtaaccg
    14161 attttgccaa gttacgcggc tggtcaacgt cggtgccttt gatcagcgcg acatggtaag
    14221 ccagcagctg cagcggaacg gtgtagaaga tcggtgcaat cacctcttcc acatgcggca
    14281 tctcgatgat gtgcatgtta tcgctactta caaaacccgc atcctgatcg gcgaagacat
    14341 acaactgacc gccacgcgcg cgaacttctt caatgttgga tttcagtttt tccaacagtt
    14401 cgttgttcgg tgcaacgacg ataaccggca tatccgcgtc aatcagcgcc agcgggccgt
    14461 gtttcagctc gccagcagcg taggcttcag cgtgaatgta ggagatctct ttcagcttca
    14521 atgcgccttc cagtgcgatt gggtactgat cgccacggcc caggaacagt gcgtgatgtt
    14581 tgtcagagaa atcttctgcc agagcttcaa tgcgtttgtc ctgagatagc atctgctcaa
    14641 tacggctcgg cagcgcctgc agaccatgca caatgtcatg ttcaatggag gcatccagac
    14701 ctttcaggcg agacagcttc gccaccagca tcaacagcac agttaactga gtggtgaatg
    14761 ctttagtgga cgccacgccg atttccgtac ccgcgttggt catcagcgcc agatcggatt
    14821 cgcgcaccag agaagaaccc ggaacgttac agattgccag cgaaccaagg taacccagct
    14881 ctttcgacag acgcaggccc gccagggtat ccgcggtttc gccagactgt gacaaggtga
    14941 tcatcaggct gttacgacgc acggcagatt tacgatagcg gaattcagag gcgatttcga
    15001 cgtcgcacgg aatacctgcc agcgattcaa accagtagcg ggaaaccata ccggagttat
    15061 aagaagtacc acaggcgagg atctgaatat gctcaacctt cgacagcagt tcgtcggcgt
    15121 tcggtcccag ctcgcttaaa tcaacctgac cgtggctgat gcgcccagta agggtgtttt
    15181 tgatcgcgtt cggctgttcg tagatctctt tctgcatgta gtgacggtaa atacctttat
    15241 cgcccgcgtc atattgcaga ttggattcga tatcctgacg ttttacttcc gcgccagttt
    15301 tatcgaagat gtttaccgaa cggcgagtaa tttccgcaat atcgccctct tcaaggaaga
    15361 taaagcgacg ggtcaccggc agcagcgcca gctggtcaga agcgataaag ttttcgccca
    15421 tacccaggcc aatcaccagc ggactaccag aacgtgccgc cagcagggta tccgggtgac
    15481 gggagtccat gatcactgta ccgtacgcac cgcgcagctg cgggatagca cgcagaacag
    15541 cctcacgcag agtcccgcct tgttttagct cccagttcac cagatgggca atcacttcgg
    15601 tgtcggtttc agaaacgaag gtatagccac gcgcttttaa ctcttcacgc agcggttcat
    15661 ggttttcgat gatgccgtta tgcaccacca taatgtgttc agaaacatgc ggatgcgcgt
    15721 tagcttctga aggttcaccg tgggtcgccc agcgagtgtg agcaataccg gtgccgccat
    15781 gcagaggatg ttcttccgct gcctgagcca gcatctggac tttaccgagg cgacgcaggc
    15841 gggtcatatg accttccgca tcaacaacgg ccagaccagc agagtcatat ccgcggtatt
    15901 ccagacgacg taaaccttca agaaggattt ctgctacatc acgttgcgcg atcgcgccaa
    15961 caattccaca catagttttt gattccgatt tatatcgttg tcggtcaacc tgtatgcccg
    16021 ttttttcggg cgccccgagc cttgtagaga gtggggttat ttttatagtt actgcttgtg
    16081 ggagggagat tatgttatct cctcatccca gatgaccgga ttacccggcc agaattactt
    16141 tttctttacc ggacgacgcc agccttcttt ctgagtctgc ggcacacggc tgatagctaa
    16201 tgcattttcg ccgacattac gcgtcacagt tgtacccgca gcaatggtcg cgcctttgcc
    16261 tactgttacc ggggccacca gctgagtgtc ggaaccgaca aacacatcgt cgccgataat
    16321 ggtcttaaat ttattcgcac catcgtagtt gcaggtaatg gttcccgcgc cgatgttaac
    16381 gttatcgcca atttccgcat cgcccaggta agtcagatga ccagctttcg agcctttacc
    16441 cagacgcgct tttttcatct caacaaagtt accgacgtgt gcaccttcca gcaactcagc
    16501 accaggacgc agacgggcaa acgggccaat agtacaggcc gctgccagat tcacgtcttc
    16561 cacaacggta tacggactga tttcgcaatc atcgccaatc acgctgtttt taatcacgca
    16621 accggtgccg attttcacgc gatgaccgag agtcacgttg ccctcgatga taacgttagt
    16681 atcaatttca acatcgcgcc cgtgagtaag cgtaccgcgc agatcaaaac gcgccggatc
    16741 gcgcagcata acgcctgcta acagcagttt ttcagcctgt tcggactggt aaacgcgctc
    16801 cagacgggag agttgcaggc ggttattcac accttctact tcgcttaaac gttgcggatg
    16861 aacggcgacg atttcacgcc cttcctgata cgccagcgca ataatgtcgg tgatgtagta
    16921 ttcgccctga gcattattgt tggtcagctt cgccagccag cgtttcatat ctgcgccgtt
    16981 agagatcaga atgccggtgt tgatctcctg aatctgacgc tgctcgtcgg tggcatcttt
    17041 gtgctcaaca atgccggtaa ctttgccatt ttcacgggtg atacgtccat aaccggtcgg
    17101 atcatccagt ttcaccgtca gcagaccaat gccaccctgc ggtttagcat cacgcaggcg
    17161 ctggagtgtt tcgacagaga tcagcggcac gtcgccgtag agcattaaaa tgtcttcatc
    17221 atcggcaaag aaaggtgcgg cctgctgcat tgcatgaccc gtacccagct gctctgcctg
    17281 aagcacccag ttaaggttgt cgtctttcag cgcctgttta agcagatcgc cgccgtgacc
    17341 gtacaccagg tgaacgtgcg ctgcgcctaa ttcattcgca gcatcaatga catgctgaac
    17401 catcgctttc ccggcaaggg tatgcagcac tttcggaaga tcggaataca tgcgcgtgcc
    17461 tttgcctgcg gcaaggatca ctacgctcat agcattattc aacatacgcg tcctgactgt
    17521 aatttgagaa cgaatttaaa ccgcttcacc ttgaaaaaac tacatttttt tcatcgtgaa
    17581 atggacagag gataaattgt tcaataacgg attatccccg ctgacgaaag tgccattttc
    17641 gaccatcgtc acgccttttg tctgcagaaa attaaggcag taccttcatt taagcgtcag
    17701 gtggatgttt ttgctcttat ttcgatcaat gaataaacgg gaaaacaggg gtgttttata
    17761 tcagcaggat ctatgtgaac gctcttcagg acggatcacg cgtaaaaaaa aaccagcctg
    17821 tttccagact ggcttttgtg cttttcaagc cggtgttaca tcgctttttt ggtcaactcg
    17881 ataacgcgca gctgcgcgat cgctttggcc agttccgcag acgcctgagc gtaatctacg
    17941 tcgccgtgag agctgctaat gtgctcttca gccttacgtt tcgcttccat ggctcgcgct
    18001 tcgtcgagat cctggccgcg aattgcggtg tcggccagaa cggtcacgtt gccagactgc
    18061 acttcaagaa tgccgccaga cagatagata aactcttcgt gaccgtgctg tttcacgatg
    18121 cgaatcatac caggcttaat ggcggtgagc agcggtgcgt ggccagggta gatccccagt
    18181 tcaccttcgc tacccgttac ctggattttc tcgaccagac cagagaacat ttgttgctct
    18241 gcgctgacga cgtccaggtg gtaagtcatt gccatatcac cctccgatta aggcgttaaa
    18301 gttttttggc tttttccaca gcttcttcga tggaaccgac catgtagaac gcctgctccg
    18361 gcaggtgatc gtattcgcct tccatgatgc ctttaaagcc acggatggtg tctttcaggg
    18421 agacgtattt acccggagaa ccggtgaata cttctgccac gaagaacggc tgggacagga
    18481 agcgctggat cttacgagca cgcgctacca ccagtttgtc ttcttcagac agttcatcca
    18541 tacccaggat ggcgatgatg tctttcagtt cctgataacg ttgcaggatg gactgaacgc
    18601 cacgcgcggt gtcgtagtgt tcctgaccaa ccaccagcgg gtccagctga cggctggtgg
    18661 agtccagcgg gtcaacggcc gggtagatac ccagagacgc gatctgacgg ctcagtacca
    18721 cggttgcgtc aaggtgcgca aaggtggttg ccggagacgg gtcagtcaag tcatccgcag
    18781 gtacgtatac cgcctgtacg gaggtgatag aaccagtttt ggtggaggtg atacgttcct
    18841 gcagaacgcc catctcttcc gccagggtcg gctgataacc taccgctgaa ggcatacggc
    18901 ccagcagtgc ggatacttcc gtaccggcca gggtgtaacg atagatgttg tcaacgaaca
    18961 gcagaacgtc acgaccttcg tcacggaatt tctcagccat ggtcagaccg gtcagagcaa
    19021 cgcgcagacg gtttcccggc ggctcgttca tctggccata caccagggat actttgtcga
    19081 taacgttgga gtcggtcatt tcgtggtaga agtcgttacc ctcacgagta cgttcaccta
    19141 cgcccgcaaa cacagagtaa ccggagtgct cgatcgcgat gttacgaatg agctccatca
    19201 tgtttacggt tttacctaca cccgcaccac cgaacagacc aactttaccg cccttagcga
    19261 acggacacat caggtcgata actttgatac cggtttccag cagttcctga gagtttgaca
    19321 gctcttcgta ggaaggtgct gcgcggtgaa tcgcccaacg ctcttcttca ccgatctcgc
    19381 ctttcatgtc gaccggttca cccagtacgt tcatgatacg gcccagagtc gctttaccta
    19441 ccgggacttc gatcgggtgt tcgaggtctt ttacatccag accgcgacgc agaccgtcgg
    19501 aggaacccat tgcgatggta cgcacgatac cgccgccgag ctgctgctga acttccagca
    19561 ccagacgctc attaccattt tgcacctcaa gagcatcgta cacgcgcggt acggcatcct
    19621 gagggaattc gacgtcaact acggcgccga ttacctggac aatctttcca gtagccatct
    19681 taaatcctct acgaaataac ctgtttaaac cgcggcggcc cccgagacga tctcggtgag
    19741 ttcctgagta atgctggcct gacgagcttt gttgtatacc aactgcagct ctttaatcag
    19801 gctgccgcca ttgtcggtcg cggctttcat cgccaccata cgggcggcct gctcgctggc
    19861 caggttttca accacgccct gataaacctg agattcgaca taacgacgca gcagggtatc
    19921 cagcaacgcc ttcggatcgg gttcgtacag gtaatcccag gatttatgtt tcagatcatc
    19981 atcatctgat gccggtaacg gcagcagctg gctgatggtc ggaacctgag acatggtgtt
    20041 aataaatttg ttgctgacaa tgtaaagctt gtccagacgg ccttcgtcgt aggcctgcaa
    20101 catcactttt accggaccga tcagttcgga cagggaaggg ttatccccca tgccggtgac
    20161 ctgggcaaca acattgccgc ccacggagtt gaagaacgac acgcctttcg agccgatcat
    20221 tgcgaggtcg cattgaacgc ctttgtcggt ccaggtcttc atttccgcca gcagtttttt
    20281 gaacaggtta atgttcaaac caccgcacaa accacggtcg gtcgacacca ccaggtagcc
    20341 cacgcgttta acgtcgcggt cttccaggta aaggtgctta tattccagat taccatgtgc
    20401 aaggtgacca atcactttgc gcatggtttc tgcataagga cggctggccg ccatgcgatc
    20461 ctgcgattta cgcattttgg aagcggcgac catctccatc gctttagtga tcttttgcgt
    20521 gttctggacg cttgcgatct tactacgtat ctcttttgcg ccggccatga gcttctcctc
    20581 aatgccttgc ggcctgccct aaggcaagcc gccagacgtt accaggattg ggttgctttg
    20641 aaggaatcga ggatgccttt cagtttgcct tcgatttcgt cgttgtagcc accggtctgg
    20701 ttgatctctt gcatcaacgg agcgtgatca cggtcgacgt aagccagcag agcggcttcg
    20761 aagctgccaa ttttcgacag ttcaacatcc gccaggtaac cacgttctgc tgcgaacaga
    20821 accagagact gctgcgcaac ggacatcggc gcatactgtt tctgtttcag cagttcggtc
    20881 actttctgac cgtggtcaag ctgcttacgt gttgcatcgt caaggtcgga tgcaaactga
    20941 gagaacgctg ccagttcacg atactgtgcc agagcggtac ggataccacc ggacagtttt
    21001 ttcatgatct tggtctgtgc tgcaccacca acacgggata cggaaatacc cgggttaacc
    21061 gcaggacgaa taccggcgtt gaacaggttg gtttccagga agatctgacc atcggtaatg
    21121 gagattacgt tggtcggaac gaacgcagaa acgtcacccg cctgagtttc gataatcggc
    21181 agtgcggtca gagaaccggt tttccctttc acttcacctt tggtgaaggc ttcaacgtat
    21241 tcggcgttaa cacgtgcagc acgctccagc agacgagagt ggaggtagaa aacgtcgccc
    21301 gggaatgctt cacgtcctgg cggacgacgg agcagcaggg agatctgacg gtaagcaaca
    21361 gcctgtttag acaggtcatc gtaaatgatc agcgcatctt caccgcggtc acggaagtat
    21421 tcgcccattg cgcaaccggc atacggtgcc aggtattgca gtgcagcgga ttcagacgcg
    21481 gttgctacca caacgatggt gttagccagt gcgccgtgct cttccagttt acgtaccacg
    21541 ttagaaatgg tggacgcttt ctggccgata gcgacataga tacatttgat accggaatcg
    21601 cgctggttga tgatggcatc gatagccagt gcggttttac ctgtctgacg gtcaccgatg
    21661 atcaattcac gctgaccacg accgattggg atcatggagt caacggcttt ataaccggtc
    21721 tgtaccggct gatctacgga ctgacgttcg ataacgcccg gagcgattgc ttctacagca
    21781 gagaagccgt cgtgatccag cggaccttta ccgtcgattg gtgcacccag agtgttaacc
    21841 acacggccca gcaggccacg gccaaccgga acttccagga tacggccagt acacttaact
    21901 ttcatgcctt cggcaaggtc agcgtacgga cccataacaa ccgcacctac agagtcgcgc
    21961 tcgaggttca gtgcgatagc gtaacggtta cccggcaggg agatcatttc accctgcata
    22021 caatcggcca ggccgtgaat gcggataaca ccgtcactta cagaaacaat agtaccttcg
    22081 ttgtgagctt cactcacaac attgaactga gcaatgcgct gcttgatcag ttcgctgatt
    22141 tcggtggaat tcagttgcat gctccagtcc ccttaagact gcaagacgtc tgcaaggcgc
    22201 tcaagacgac cgcgtacgct gccatcaatg accatatcac ccgctcggat gataacgcct
    22261 gccattacag acttatcgat tttgcaattc agcttaactt tgcgtgacag acgtttttcc
    22321 atcgcagcag aaattttcgc gagctgttgt tcactcagtg cggcagcgga aatgacgtct
    22381 acctcagcgg tagcctcact cacggcacga aggtgaataa actgctccag aacatccggg
    22441 agcgcgttaa gacgaccatt ttcagccatt acccgaatca ggttctgacc gttttcgtcc
    22501 agttgctcac cacaaactgc gataaacgac tcggcgagcg tttctggcgc aagcgcgcca
    22561 gagagaagct ctgccatttg ttcgtttttg gttacctcgg cggcaaacgc cagcatgtcc
    22621 tgccagcgtt ctacactttg gtgttcgacg gcaaagtcaa aagctgcttt ggcgtagggg
    22681 cgagctaccg taataaattc agacatcagc ccctccctcc ttacagttca gcgacaagtt
    22741 tatccacgat gtcgctgtta gcagcttcat ccacggaacg ttcgatgatc ttctcggcgc
    22801 cagcaacagc caggatagca acttgcttac gcagctcttc acgggcacgt ttacgctcgg
    22861 cttcaatttc tgcctgcgcc tgggccacga ttttagtacg ttcctgttct gcctcagctt
    22921 tcgcttcgtc cagaatctgc gagcggcgtt tgttcgcctg ctcgatgatt acctgggctt
    22981 ccgctttcgc ttttttcagc tggtcggtcg cgctggcctt tgcaaggtca aggtccttat
    23041 gtgctcgttc tgcggaagca aggccgtcag caatttcttt ttgacgtttt tcgatggctg
    23101 ccattaatgg cggccatacg tacttcatgc agaacagaac gaacaggaca aacgcgatgg
    23161 cctggccgag gattgttgcg ttaagattca cagcacaatg cctctattta gttaacgttc
    23221 tgatattgct ctttaaataa aagcaacgct tactacgcga cagcgaacat cacgtacaga
    23281 cccagaccta cagcgatcat cgggatagca tccaccagac ccataacgat aaagaactga
    23341 gtacgcagca gaggaatcag atcaggttga cgcgctgcgc cttccaagaa tttacccccg
    23401 aggatgccga taccgatcgc agcaccgatt gccgccagac ccatcatcac agcggcagcc
    23461 atgtacagca gatccatatt caggttttcc atgacagtct ccagtttgtt tcagttaaaa
    23521 cgtagtagtg ttggtaaatt aatgttcttc agacgccatc gacagataga cgatcgtcag
    23581 aaccatgaag atgaaggctt gcagcgtaat gatcaggatg tggaaaatgg cccacggcac
    23641 attcaggatc cactgtgacc accacggcaa cagaccagca atcagaatga aaatcagctc
    23701 accggcatac atgttaccga acagtcgcaa accgagtgaa actggtttgg acagcaggct
    23761 taccccttca aggattaagt tgacaggaat gaacgcccag tgattgaacg gctgcagcgt
    23821 caactctttc gtgaagccgc cgatgccttt cattttgatg ctgtagaaca gaatcaggat
    23881 aaatacgccc aatgccatag acagcgttac gttcacgtcc gcagacggaa ccacacgcag
    23941 tgcaggcaga cccagtacat gttcagcaat gtacggcagc aggtcgatag gcagtaaatc
    24001 catcaggttc atcaggaata cccagacgaa gatcgtcagg gccagcggag caatcagctt
    24061 gcttttgcca tggtacatgt ctttcacgct accattaaca aagccgatca ccagctcaat
    24121 cgcggtctga aacttacctg gcacaccgct ggtcgccttt ttggctacgc tacggaataa
    24181 aaccaggaac aacagaccca gcaccaccga gaagaacatg gagtcaatat tgattgtcca
    24241 gaaggtggct ggggggtttt gtggatccac cagcgagaat gtacgcaggt ccagctgaag
    24301 gttattcagg tggtgtccta tgtaatcctg cggcgtcata ttttctgaag ccatgatgcc
    24361 ttttaccctt tgttgttaat tacagccggt gccagtatct gaaccaccag caccaaaacc
    24421 cacgtaacga tcagcggcaa gaataccgcc tttaaaaccg ccaacgccac caccagtaac
    24481 accaacatcg ccagaacttt gaaagcttcg ccaaatgcga atgtccaggc cacccggcct
    24541 ttcgctggtg tatgcgcctg gtgacgccag gcaaatatca taaacaaaac gttaggcaga
    24601 aagactgcca ggcccccgct tattgcagag acgccccaga aggggtcttt gaggctgaac
    24661 agcaatccac ttgctatcac caccagtaac tgaacgagca gaagcttccg agcaacgttt
    24721 cgactcacga gcgacacaga catcacgttt tttactcctg ctcccttcga ggtatgccgc
    24781 gtgtcgtata aaactttctt taaggcttag agtcaagcat caaaaagcgg tcaaattata
    24841 cggcgcgccc ccgtgatttc aaacaataag tagccaaaag gtgaataaat gtttaaatat
    24901 ttttccagtg catacaattg cgacttttct actaaccctg ttcgatcatg aaaaactgta
    24961 aataacgcgt aaacactggt gataaagcgt gcttcagatc acatattgcg catgttcgcg
    25021 cacagcatat ttatttactt ggcaaatgat gcctttgcaa gtttatgata tttcagtcta
    25081 aaaacagata ctgttttaat aaatgacatt tacacaacaa aaaccaccca ttgacatttt
    25141 taataatgtt ttagcagcca atgatggttc ttagcgccga tttttagcag actgatattt
    25201 tcactaatga cttattttct gcttaccaaa aaaagccacg ttatcttgtt gatgcaaaag
    25261 agtgaacgtg gcgttaaatg taaccagtta tatcagtaga aaacctggtt gttgttaaca
    25321 gtctaaccgg tcaatttttt atgatttttt tgataaaaat taaattttat ttgctttaat
    25381 caccaccaga tgacgttcgc catccagggc tggaacctga agtttaacca ctgattcgac
    25441 ctgatattct tcgggcaaca aagcgatttc atcttccggc atttgccctt tcagcgcgta
    25501 gaaacggcct tgctcaccag gaagatggtg gcaccagctc accatatcgt tcagagaggc
    25561 aaaagcgcgg ctaattacgc catcaaatgg cggctctgaa ggaaactctt ctaccctgct
    25621 ctgtacaggt tcaatattct ccagtttaag ctcatgttgc acctgacgaa ggaaacgcac
    25681 gcgtttacca aggctatcca acagagtgaa atgggcttca ggacgcacga tagagagtgg
    25741 aatgcctggc agtcctggtc cggtgccgac atcgataaac cgttcacctt gcagatacgg
    25801 tgccaccaca atgctatcga gaatatggcg taccagcatc tcattaggat cgcggaccga
    25861 agtcaggttg tacgctttgt tccatttatg cagcatattc acgtaggcaa taagctggtt
    25921 tttctggtga tcggtaagcg aaatacctgc gtctttcagc agtaaggaga gtttgttgag
    25981 cacggtgatt acctgttctt gatgcgttgc ctggtaagcg ggtgcttacc aggcattttt
    26041 aatgcgttat gcgctacgac gcagcatacc ctgttttttc agccacacca gcagaatgga
    26101 gatagccgca ggcgtgacgc cagaaatacg cgaagcttgg ccgatagagg ctggtttgtg
    26161 atcgttaagt ttggcgatca cttcgttaga aagaccggat acctggcggt aatccagtgt
    26221 cgcgggtagc agggtgttct cgttacgcag ctgcttttcg atctcatctt gctggcgcgc
    26281 gatataacct tcgtatttaa cctgaatctc aacctgttcc gccgcctgtt cgtctgtcaa
    26341 cgcaggggca aacggcgtca gcgtggttaa tttttcataa gtcatttccg gacgacgcag
    26401 cagatcttca ccactggctt cacgggaaag cggcgcagtc aggtgagcat tcacttcggc
    26461 tgcagcttcc gccgacgggg ttacccaggt cgatttcaga cgctgacgct cacgctcgat
    26521 attctcaagt ttctcgttaa agcgcgccca acgttcgtca tccaccaggc ccagttcacg
    26581 accgatttca gtcaaacgca gatccgcatt atcttcgcgt agcatcagac gatattctgc
    26641 gcgcgaagta aacatacgat acggttcttt ggttcctaaa gtgcacaggt catcaactag
    26701 tacgccgaga tacgcctgag aacgtgccgg agcccaacct tctttgtcag cagacagacg
    26761 ggcagcgtta agaccggcca gcaaaccttg cgcagcggct tcttcgtaac cggtagtgcc
    26821 gttaatctga ccagcaaaga acagcccctg gataaacttg ctctccagcg tcggtttcag
    26881 gtcgcgagga tcgaagaagt catactcaat ggcataaccc ggacgcacga tcttcgcgtt
    26941 ttccatcccc tgcatagagc ggacgatttg catctgcaca tcgaacggca ggctggtgga
    27001 gataccgttc ggataaattt cattagaggt cagtccttcc ggttcaagga agatctgatg
    27061 ctgatttctg tcggcgaagc gcatgacttt gtcttcgatc gacgggcagt agcgtgggcc
    27121 gacaccttcg atcacccctg catacattgg gctacgatcg aggttactgc ggatcacatc
    27181 atgggttttc tcgttggtat gagtgatata acacggcacc tgctggggat gctgggacgc
    27241 attgcccata aacgagaata ccggcattgg gttatcgcca tgctgttgcg ccagcacact
    27301 aaagtcgata gttcgagcat caatacgcgg tggtgtcccg gttttcagac gaccaacgcg
    27361 cagcggcagt tcacgcaaac ggcgagaaag cggaatggac ggcggatcac cagcacggcc
    27421 accgctgtaa ttatccagac cgatatgaat tttaccgtcg aggaacgtcc caacggtgag
    27481 cacgacggct ttggcacgga acttcagtcc catttgggta acagcaccga ccacgcgatc
    27541 gttttcgaca ataagatctt caaccgcctg ctggaagatc atcaggttcg gttggttctc
    27601 cagcgccgta cgtaccgcct gacggtagag cacacgatcc gcctgagctc gggtagcgcg
    27661 aaccgccggt cctttgcttg cgtttagtat cctaaactgg atacccgctt gatcgatcgc
    27721 tttcgccatc agaccgccga gtgcatccac ttcttttacc agatgtccct tcccaatacc
    27781 gccgatcgcc gggttgcagc tcatctgccc cagagtgtcg atattgtgtg tcaaaagcag
    27841 agtctgttga cccatacgcg ccgcggccat cgcggcctcg gtgcctgcat gacccccgcc
    27901 aatgatgatg acgtcaaaag gatccggata aaacatggtg attgcctcgc ataacgcggt
    27961 atgaaaatgg attgaagccc gggccgtgga ttctactcaa ctttgtcggc ttgagaaaga
    28021 cctgggatcc tgggtattaa aaaggagatc tatttattta gagatctgtt ctattgtgat
    28081 ctcttattag gatcgcactg ccctgtggat aacaaggatc cggcttttaa gatcaacaac
    28141 ctggaaagga tcattaactg tgaatgatcg gtgatcctgg accgtataag ctgggatcag
    28201 aatgaggggt tatacacaac tcaaaaactg aacaaccgtt gttccttgga taactaccgg
    28261 ttgaaccaag cttcctgaca gagttatcca cagtagaacg cacgatctgt atacttattt
    28321 gagtaaatta atccacgatc ccagccattc ttctgccgga tcttccggaa tgtcgtgatc
    28381 aagaatgttg atcttcagtg tttcgcctgt ctgttttgca ccggaatttt tgagttctgc
    28441 ctcgagttta tcgatagccc cacaaaaggt gtcatattca cgactaccaa taccgattgc
    28501 gccaaagcgg accgcagaaa gatcgggctt ctgttcctgc aatgcttcat agaaaggaga
    28561 aaggttgtcc ggaatatctc cggcaccgtg ggtggagctg ataatcagcc agatccccga
    28621 ggcagataaa tcttccaaca gcggaccgtg cagcgtttcg gtggtaaaac ccgcctcttc
    28681 cagcttttca gccaggtgtt ctgctacata ttcggcaccg ccgagggtgc tgccgctgat
    28741 aagagtgata tctgccataa accgccacct ttattaagag tggcgtattg tacgctgtga
    28801 acgcgttggg atctacctgt ggaaaagtat gggattaaaa aagccgatca gggcttgata
    28861 gtacgcatga tcgggtgttg caggacgatc aatgtctcgg tggactgaat ttcatcaatt
    28921 gtttggatct tgttgataag tacatgctgg agagcgtcga tcgaacggca cattactttt
    28981 ataaagatgc tgtagtggcc tgttgtgtaa taggcttcag tgacttcatc aaggctttcc
    29041 agctttgcca gcgcggaagg gtagtctttg gcgctcttta atataatgcc gataaagcag
    29101 cctacgtcat aaccgagctg cttcgggctg acatcaatac gcgccccggt aatgatcccc
    29161 gcctgcttca ttttctctac ccgaacgtga atcgtccccg gactgacgcc aaattgtttc
    29221 gccagttcgg cgtaagcggt gcgcgcattg cccattaatg cttccaggat gccacggtcc
    29281 agattgtcga tcagataatt ttccatagga ttttcttatg cagattgatg attcattcta
    29341 ttttagcctt cttttttaat gaatcaaaag tgtgttaggc tttttattga atgattattg
    29401 catgtgtgtc ggtttttgtt gcttaatcat aagcaacagg acgcaggagt ataaaaaatg
    29461 aaaaccgctt acattgccaa acaacgccaa attagcttcg tgaaatctca cttttctcgt
    29521 caactggaag aacgtctggg gctgatcgaa gtccaggcac cgattcttag ccgtgtgggg
    29581 gatggcacgc aggataactt gtcgggctgt gaaaaagcgg tgcaggtaaa agtgaaagct
    29641 ctgcctgatg cccagttcga agtgattcat tcactggcga agtggaaacg tcagacctta
    29701 gggcaacacg acttcagcgc gggcgaaggg ctgtacacgc acatgaaagc ccttcgcccc
    29761 gatgaagacc gtctttctcc gttgcactcg gtctatgtag accagtggga ctgggaacgc
    29821 gtaatgggcg acggtgagcg tcaattctcg actctgaaaa gcacggtaga ggcgatctgg
    29881 gcgggaatta aagcaaccga agctgcggtt agcgaagagt ttggcctggc accgttcctg
    29941 ccggatcaga tccacttcgt acacagccag gagttactgt ctcgttatct ggatctcgat
    30001 gccaaagggc gtgagcgggc gatagcgaaa gatcttggcg cggtattcct tgtcgggatt
    30061 ggcggcaagc tgagcgatgg tcatcgccac gacgtgcgcg caccggatta tgatgactgg
    30121 agcaccccgt cagagctggg tcatgcgggt ctgaacggcg atattctggt gtggaaccct
    30181 gtactggaag atgcgtttga gctttcttcc atggggatcc gcgtggatgc cgacacgctg
    30241 aagcatcagc tggcgctgac cggtgatgaa gatcgtctgc agctggaatg gcatcaggcg
    30301 ctgctgcgcg gtgaaatgcc gcagaccatc ggcggcggta tcggccagtc tcgtttgact
    30361 atgctgctgc tgcaactgcc gcatatcggc caggttcagt gtggagtatg gccagctgct
    30421 gttcgcgaga gcgtcccttc tctgctgtaa taatttatcg ccgccagcgt ctgagcaggc
    30481 ggcttcgcat cccggtatca aagcgccaga tatgatcgaa aatgcgcatg atgccgggtt
    30541 tgccgtgtgc cgacatcgcc acggcatgaa agcgatgctg atgtacccgc tgcagctctt
    30601 tcactttact cgtcacgtcg tcaggcaacc gctgagcgat aaaatcagaa atcaccaccg
    30661 catcggcatc aaaccattcc ctgctttgca agcgttccat aatggcgcga aaacaactgg
    30721 caagatcggt gccgccacga aactgctggc ttaaaaaacg gattgcttgt tcgatgcctt
    30781 gtgggcctga aagctcataa cggacgatct cggtggaaaa tagcataata tagcagcgcc
    30841 ggttttctgc gagagcaatg cgcatcaagg ccaggcagaa cgctttcgca cactgttcat
    30901 taaagccgcc cattgagccg gaagtatcca cacagacaat aaacggcccg cgcggctgtt
    30961 catcgtaatc tttatgtacc accggacgtt cgatcacttt ttcacgccac gactcaccgt
    31021 gcaggcgata ggtgagcaac tgtttttcca ccagccgacg gtaaaactca tactccagtt
    31081 ccgttatccc tagtgtcgcc agttctggcg gcaggagacg taaaatatca tcgctttgtt
    31141 gcagaccatc aacctgctca ggaaccgtcg ccggttcgcg caccatggtg cggaaggttt
    31201 ccatctgcgc atcgttgcgc ggtattgatt tggcttcccg agaacgcccc agctgctctg
    31261 ccaggcgttt cagttccggc tgttcgttaa gaaattcacc gtatttcaca atcaactgat
    31321 agtcgccacg tttaagctgg ccggcgctca tatcccacag acgaccagct gcggtattgt
    31381 tatctgcgag aatcggttca agttgtccgc tcagcgtcat gcgttcctga acttcactta
    31441 acagttgttc gcgttcttct tctaatagct gttgatttaa cgtcgttgct tgcacgatca
    31501 gacttaaacg ccagcgctgg agaaaaagcg tgtgtaacgc tgaagttatt gtgctgttag
    31561 catcaaccaa ctgccgggct tgttctgccc atggggaatt cagacgatgc agtaagtcca
    31621 ggatctgtgg tagctgcaca ataaactgcg gcgtggagag gagctggctt tgctgatagc
    31681 acatcacctc ttcggtgagt tctggcggga ctcgggcatc tttcagccga ctgcgcagcg
    31741 cctcactcca gcggggaaca tcatcagtga ttgctgcctt cagtcgtggg aatttttcaa
    31801 agaagaccgc cagctgcggt gaggccagca gtgcgatgat catctcttcg atcaatccct
    31861 cttcgctgac ggccagcatc acattaagcg tatccagcgt tagcattgtt gtgcctggcg
    31921 aatctgtgca ccgacatcct gtaggctggc ttcaatgcga cctaaccagt cgccagggat
    31981 aaacagacat ttttgctgtt cgctgaataa agcgtgttgc ttacgccagt cgctttcaag
    32041 ctcttccagt tgttgtttta tttcacctgg cagaccttca gccgatgaac cgggaagtgc
    32101 cagcgtactg ccttgtaaac ttacatcgcg tacaacaaga tgttgggtgc tatcaacttc
    32161 cagattcagt ttctgggcaa agccgatacc gttcagtttg ccgcgaattt caccaccttt
    32221 actcagccac tgttccagcg cgctacgctc aaaggagata tgaaccactt ccatatcatg
    32281 cagttttaac ggtttttgca gcagcagagt cagagtggaa gcagtaacgt taacagggag
    32341 ttgatactgc tgacgacggc taaaaatgcc gcccagacga attaccgtta aggctgtttt
    32401 atcgctttgt tgctgctgaa gttgcaggtg acgttgcaca atcgcgccta ggcgggtcaa
    32461 catcccttgc tgttgccagg cgtgaccggt catcaataca tcaatttgtt gttgtatcaa
    32521 attcaggctt tgcgcgtcat accacaggca atctttcagc aaaatgagat ctaccggggc
    32581 aacagcactg cgaccgctaa aaaaggcgct ggcctgcaat aatcggatcg cttttttcca
    32641 gcgacgatcc gagacataag gcgcatccgg taatttatcc agttgctggc gcagcataaa
    32701 aatcagctca aatacatgat cgggcagcgt aatttcacca atctctttct gccagcgttc
    32761 atattcttca tctgtgacct gcaaggcatc aggaaccgga ttgtcgtttt catcctgttg
    32821 actggtcagc atggagcgga aattcgcttt atcctgcact ttatctaacc acagacgaat
    32881 cagcatgcgg tcatataacg cttccagact gctgtctgct tccggcagct cgttggaggc
    32941 cgccaccagc agacgcatcg ggattttttc tacgtgtgca ccgttgcgga actggcgctc
    33001 gttaatggcg gtgagcaagg tattaagaat tgccgggccc gctttccaga tctcatccag
    33061 aaagacaatt tctgcttccg gcaggtaacc gctggttaaa cgttcatagc gcccttcatc
    33121 ttttagcgcc tgaatagaaa ggggaccaaa aacttcttcc ggcgtggaga agcgggtcat
    33181 cagatattca aacgcgcggg cattctgaaa ggcgaatttt aagcgccggg cgatcaaact
    33241 tttggcaata cctggcgggc caaggaggaa cacactttca ccacttaatg ccgctaataa
    33301 acacaagcgg atggcgtggc tacgttcata aagccccttt tccaacgaac tgctcaggcg
    33361 ggaaattctt tccgctaata aatgagggtg agccataatg aagtggcgtc ctttcgtcaa
    33421 aagttctgcg taaattgcga gtatagacgt ttcttgctgg tggctaaaat agtctcaaag
    33481 gggggtaatg ccagtcagtt aagcaactga ctggttcttt ttcggggctg tggggtattt
    33541 ccagggcctc tcctt
//
LOCUS       DADMJE010000401        11188 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.guided.140, whole genome shotgun sequence.
ACCESSION   DADMJE010000401 DADMJE010000000
VERSION     DADMJE010000401.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11188
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.guided.140"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            complement(37..603)
                     /locus_tag="JN001_004349"
                     /pseudo
     CDS             complement(37..603)
                     /locus_tag="JN001_004349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418580.2"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
     gene            complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JN001_004350"
     CDS             complement(822..1799)
                     /gene="epmA"
                     /locus_tag="JN001_004350"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000004771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P--(R)-beta-lysine ligase"
                     /protein_id="HAY9055312.1"
                     /translation="MSETASWQPSASIPNLLKRAAIMAEIRRFFADRGVLEVETPCMS
                     QATVTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGCGPVFQLCRSFRNE
                     EMGRYHNPEFTMLEWYRPHYDMYRLMNEVDDLLQQVLDCPAAESLSYQQAFLRYLEID
                     PLSADKTQLREVAAKLNLSNVADTEEDRDTLLQLLFTFGVEPNIGKEKPTFVYHFPAS
                     QASLAQISTEDHRVAERFEVYYKGIELANGFHELTDAREQQQRFEQDNRKRAARGLPQ
                     HPIDQNLIEALKVGMPDCSGVALGVDRLVMLALGAETLAEVIAFSVDRA"
     gene            2124..3932
                     /gene="frdA"
                     /locus_tag="JN001_004351"
     CDS             2124..3932
                     /gene="frdA"
                     /locus_tag="JN001_004351"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase (quinol) flavoprotein
                     subunit"
                     /protein_id="HAY9055313.1"
                     /translation="MQTFQADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRS
                     HTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVDYFVHHCPTEMTQLELWGC
                     PWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVLD
                     ILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAL
                     SHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKNGYRYLQDYGMGPETPLG
                     EPKNKYMELGPRDKVSQAFWHEWRKGNTISTPRGDVVYLDLRHLGEKKLHERLPFICE
                     LAKAYVGVDPVKEPIPVRPTAHYTMGGIETDQNCETRIKGLFAVGECSSVGLHGANRL
                     GSNSLAELVVFGRMAGEQATERAATAGNGNEEAIEAQAAGVEQRLKDLVNQDGGENWA
                     KIRDEMGLAMEEGCGIYRTPELMQKTIDKLAELQERFKRVRITDTSSVFNTDLLYTIE
                     LGHGLNVAECMAHSAMARKESRGAHQRLDEGCTERDDVNFLKHTLAFRDADGTTRLEY
                     SDVKITTLPPAKRVYGGEADAADKAEAANKKEKANG"
     gene            3925..4659
                     /locus_tag="JN001_004352"
     CDS             3925..4659
                     /locus_tag="JN001_004352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020882957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase/fumarate reductase
                     iron-sulfur subunit"
                     /protein_id="HAY9055314.1"
                     /translation="MAEMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYI
                     KDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDYTDGMKVEALANFPIERD
                     LVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACP
                     QFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNSQNGVWSCTFVGYCSEVCPKH
                     VDPAAAIQQGKVESSKDFLIATLKPR"
     gene            4670..5065
                     /gene="frdC"
                     /locus_tag="JN001_004353"
     CDS             4670..5065
                     /gene="frdC"
                     /locus_tag="JN001_004353"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdC"
                     /protein_id="HAY9055315.1"
                     /translation="MTTKRKPYVRPMTSTWWKKLPFYRFYMLREGTAVPAVWFSIELI
                     FGLFALKNGPDAWAGFVDFLQNPVIVIINLITLAAALLHTKTWFELAPKAANIIVKDE
                     KMGPEPIIKSLWAVTVVATIVILFVALYW"
     gene            5076..5435
                     /gene="frdD"
                     /locus_tag="JN001_004354"
     CDS             5076..5435
                     /gene="frdD"
                     /locus_tag="JN001_004354"
                     /EC_number="1.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate reductase subunit FrdD"
                     /protein_id="HAY9055316.1"
                     /translation="MINPNPKRSDEPVFWGLFGAGGMWSAIIAPVMILLVGILLPLGL
                     FPGDALSYERVLAFAQSFIGRVFLFLMIVLPLWCGLHRMHHAMHDLKIHVPAGKWVFY
                     GLAAILTVVTLIGIVTI"
     gene            5498..6631
                     /gene="blaEC"
                     /locus_tag="JN001_004355"
     CDS             5498..6631
                     /gene="blaEC"
                     /locus_tag="JN001_004355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001336292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BlaEC family class C beta-lactamase"
                     /protein_id="HAY9055317.1"
                     /translation="MFKTTLCALLITASCSTFAAPQQINDIVHRTITPLIEQQKIPGM
                     AVAVIYQGKPYYFTWGYADIAKKQPVTQQTLFELGSVSKTFTGVLGGDAIARGEIKLS
                     DPATKYWPELTAKQWNGITLLHLATYTAGGLPLQMPDEVKSSSDLLRFYQNWQPAWAP
                     GTQRLYANSSIGLFGALAVKPSGLSFEQAMQTRVFQPLKLNHTWINVPPAEEKNYAWG
                     YREGKAVHVSPGALDAEAYGVKSTIEDMARWVQSNLTPLDINEKTLQQGIQLAQSRYW
                     QTGDMYQGLGWEMLDWPVNPDSIINGSDNKIALAARPVKAIKPPTPAVRASWVHKTGA
                     TGGFGSYVAFIPEKELGIVMLANKNYPNPARVAAACQILNALQ"
     gene            6720..7253
                     /locus_tag="JN001_004356"
     CDS             6720..7253
                     /locus_tag="JN001_004356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_313157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipocalin family protein"
                     /protein_id="HAY9055318.1"
                     /translation="MRLLPLVAAATAAFLVVACSSPTPPRGVTVVNNFDAKRYLGTWY
                     EIARFDHRFERGLEKVTATYSLRDGGGLNVINKGYNPDREMWQQSEGKAYFTGAPTRA
                     ALKVSFFGLFYGGYNVIALDREYRHALVCGPDRDYLWILSRTPTISDEVKQEMLAVAT
                     REGFDVSKFIWVQQPGS"
     gene            complement(7250..7567)
                     /locus_tag="JN001_004357"
     CDS             complement(7250..7567)
                     /locus_tag="JN001_004357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_418572.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quaternary ammonium compound-resistance protein
                     SugE"
                     /protein_id="HAY9055319.1"
                     /translation="MSWIILVIAGLLEVVWAVGLKYTHGFSRLTPSVITVTAMIVSMA
                     LLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESANPMRLASLALIVLGIIGLKL
                     STH"
     gene            complement(7749..7895)
                     /gene="ecnB"
                     /locus_tag="JN001_004358"
     CDS             complement(7749..7895)
                     /gene="ecnB"
                     /locus_tag="JN001_004358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein toxin entericidin B"
                     /protein_id="HAY9055320.1"
                     /translation="MVKKTIAAIFSVLVLSTVLTACNTTRGVGEDISDGGNAISGAAT
                     KAQQ"
     gene            complement(8006..8131)
                     /gene="ecnA"
                     /locus_tag="JN001_004359"
     CDS             complement(8006..8131)
                     /gene="ecnA"
                     /locus_tag="JN001_004359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_026283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein antitoxin entericidin A"
                     /protein_id="HAY9055321.1"
                     /translation="MMKRLIVLVLLASTLLTGCNTARGFGEDIKHLGNSISRAAS"
     gene            complement(8183..8749)
                     /gene="efp"
                     /locus_tag="JN001_004360"
     CDS             complement(8183..8749)
                     /gene="efp"
                     /locus_tag="JN001_004360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004871142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HAY9055322.1"
                     /translation="MATYYSNDFRAGLKIMLDGEPYAVEASEFVKPGKGQAFARVKLR
                     RLLTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNETFEQLSADAKAIGD
                     NAKWLLDQAECIVTLWNGQPISVTPPNFVELEIVDTDPGLKGDTAGTGGKPATLSTGA
                     VVKVPLFVQIGEVIKVDTRSGEYVSRVK"
     gene            8791..9840
                     /gene="epmB"
                     /locus_tag="JN001_004361"
     CDS             8791..9840
                     /gene="epmB"
                     /locus_tag="JN001_004361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000940527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P beta-lysylation protein EpmB"
                     /protein_id="HAY9055323.1"
                     /translation="MAHIVTLNTPSREDWLTQLADVVTDPDELLRLLNIDADEKLLAG
                     RSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFVVASGFSTDPLEEQHSVVP
                     GLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQGNKRNWQTALEYVAAHPELDEM
                     IFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTL
                     QILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFD
                     AGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTP
                     LDLQLRQQLLIKQGS"
     gene            10214..11083
                     /locus_tag="JN001_004362"
     CDS             10214..11083
                     /locus_tag="JN001_004362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_710010.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055324.1"
                     /translation="MAISIKGVNTGVIRKSNNFIALALKIKEPRNKESLFFMSVMELR
                     DLLIALESRLHQKHKLDAAARLQYEQARDKVIKKMAENIPEILVDELKNADINRRVNT
                     LELTDNQGENLTFVLTLHDGSKCELVVNELQIEMLARAIIHAINNAEMRELALRITSL
                     LDFLPLYDVDCQENGNLEYDTYSQPEWKHNLFDHYLAVLYRFKDESGKEQFSGAVVKT
                     REATPGKEVEAITRRMLDFSPRLKKLAGVPCQVYVRTVAANNAQPLTQDQCLRALHHL
                     RVQSTSKTAPQAK"
BASE COUNT         2933 a         2828 c         2788 g         2639 t
ORIGIN      
        1 atcatacact aaatcagtaa gttggcagca ttacccgaaa tgcccaccat ttaataacaa
       61 aatagtaatg cttactaaca gcaatactaa attcagacac attactgcaa taccgcccac
      121 cgcagtaatg cgggcaattt tattaatccc ctttgaagca acgacggtga ccagaatcat
      181 ccatgctact gccagcagac caaccacctg cgtaggctcc agtccggcaa tacgccagtg
      241 ctgggtcatg tcgctaccat agaggaatgt tgagaacggt acccaaactt tcgcggaggt
      301 actcaccatc cagatgatat aagaggaaaa ccacataaac gtaccaatga aggcaaaacg
      361 tggtccgaca ctattattca tccaggaata gataccacct tcttctttgc gataagcagc
      421 tcccatttca gccatcatta aggcgaatgg aataaagaat aacaatgcag aaaatatata
      481 aaagggaatc gcactataac ccattaagta ataagccgat gggctattgg caaatccaaa
      541 tacggaagta aagatcatca atatgagtcc tatcagactc atctttttta tcgtgtgagg
      601 catgaaacca tccttcattt cagcgcgtgt ataacacgtg cccactgaac tgcactgcgc
      661 aacattgagc aggcagcgta aaaaccaata cagaattgat acccggatga tatcaaatat
      721 ccagtcttaa attgtggcct ttaacggaaa aatgaaaaca tatgctacag aatggcgctt
      781 atcacgccat tcttcgctgt taattcagta atttttcaga attatgcccg gtcaacgcta
      841 aaggcgatga cttcagccag tgtctccgcg cccagcgcca acatcaccag acgatcaaca
      901 cctaatgcca cgccggaaca gtcaggcata ccgactttca aggcttcaat cagattctgg
      961 tcaatggggt gctgcggcaa accgcgcgcc gcgcgcttac ggttatcttg ttcaaagcgt
     1021 tgttgctgct cacgggcatc cgttaattca tggaaaccat tcgccagctc aataccttta
     1081 taataaacct caaagcgttc agcgacccga tgatcttcgg tactgatttg cgccagtgat
     1141 gcctggctgg ctggaaagtg gtacacaaag gtcggttttt ctttgccaat atttggctct
     1201 acgccaaagg taaacagcaa ttgtagcaac gtgtcgcggt cttcttcggt atcagcaacg
     1261 ttactcaaat tcagtttcgc tgcgacttcc cgcagttgcg ttttgtcggc agagagcggg
     1321 tcaatttcca gataacgcaa gaaagcttgt tgataagaaa ggctttctgc tgccgggcag
     1381 tccagcacct gttgtaagag atcgtccacc tcgttcatca accggtacat atcatagtgc
     1441 ggtcgatacc actcaagcat agtgaactca gggttgtgat aacgccccat ctcttcatta
     1501 cggaagctgc ggcacagctg gaataccggc ccacaaccgg caaccagcag gcgtttcata
     1561 tggtattccg ggctggtcat taaccagaga ttcatcccct gcgaatgccc ggggccaacg
     1621 aaacgtgtct caaacgggac caaatgaata tcggttaccg tcgcctggct catacaaggc
     1681 gtctccacct ccagcactcc acgatcagca aagaaacgac ggatctccgc cataatcgcc
     1741 gcgcgtttta ataagttagg aatggatgcg ctcggctgcc aggatgccgt ttcgctcata
     1801 gttaaatctc cagtttttga caagggcacg aagtctactc gcaacgcgac ggcgagacaa
     1861 attttacgca ggaatcaaac agcggtgggc agtgactaaa aaaagcacga tctgatggtt
     1921 tagtaattaa attaatcatc ttcagtgata atttagccct cttgcgcact aaaaaaatcg
     1981 atctcgtcaa atttcagact tatccatcag actatactgt tgtacctata aaggagcagt
     2041 ggaatagcgt tcgcagaccg taactttcag gcacttaccc tgaagtacgg ggctgtggga
     2101 taaaaacaat ctggaggaat gtcgtgcaaa cctttcaagc cgatcttgcc attgtaggcg
     2161 ccggtggcgc gggattacgt gctgcaattg ctgccgcgca ggcaaatcca aatgcaaaaa
     2221 tcgcactaat ctcaaaagta tacccgatgc gtagccatac cgttgctgca gaagggggct
     2281 ccgccgctgt cgcgcaggat catgacagct tcgaatatca ctttcacgat acagtagcgg
     2341 gtggcgactg gttgtgtgag caggatgtcg tggattattt cgtccaccac tgcccaaccg
     2401 aaatgaccca actggaactg tgggggtgcc catggagccg tcgcccggat ggtagcgtca
     2461 acgtacgtcg cttcggcggc atgaaaatcg agcgcacctg gttcgccgcc gataagaccg
     2521 gcttccatat gctgcacacg ctgttccaga cctctctgca attcccgcag atccagcgtt
     2581 ttgacgaaca tttcgtgctg gatattctgg ttgatgatgg tcatgttcgc ggcctggtag
     2641 caatgaacat gatggaaggc acgctggtgc agatccgtgc taacgcggtc gttatggcta
     2701 ctggcggtgc gggtcgcgtt tatcgttaca acaccaacgg cggcatcgtt accggtgacg
     2761 gtatgggtat ggcgctaagc cacggcgttc cgctgcgtga catggaattc gttcagtatc
     2821 acccaaccgg tctgccaggt tccggtatcc tgatgaccga aggctgccgt ggtgaaggcg
     2881 gtattctggt caacaaaaat ggctaccgtt atctgcaaga ttacggcatg ggcccggaaa
     2941 ctccgctggg cgagccgaaa aacaaatata tggaactggg tccacgcgac aaagtttctc
     3001 aggccttctg gcacgaatgg cgtaaaggca acaccatctc cacgccgcgt ggcgatgtgg
     3061 tttatctcga cttgcgtcac ctcggcgaga aaaaactgca tgaacgtctg ccgttcatct
     3121 gcgaactggc gaaagcgtac gttggcgtcg atccggttaa agaaccgatt ccggtacgtc
     3181 cgaccgcaca ctacaccatg ggcggtatcg aaaccgatca gaactgtgaa acccgcatta
     3241 aaggtctgtt cgccgtgggt gaatgttcct ctgttggtct gcacggtgca aaccgtctgg
     3301 gctccaactc cctggcggaa ctggtggtct tcggccgtat ggccggtgaa caagcgacag
     3361 agcgtgcagc aactgccggt aatggcaacg aagaggcaat tgaagcgcag gcagctggcg
     3421 ttgaacaacg tctgaaagat ctggttaacc aggatggcgg cgaaaactgg gcgaagatcc
     3481 gcgacgaaat gggcctagca atggaagaag gttgcggtat ctaccgtacg ccggaactga
     3541 tgcagaaaac catcgacaag ctggcagagc tgcaggaacg cttcaagcgc gtgcgcatca
     3601 ccgacacctc cagcgtgttc aacaccgacc tgctctacac cattgaactg ggccacggtc
     3661 tgaacgttgc tgaatgtatg gcgcactccg caatggcacg taaagagtcc cgcggcgcac
     3721 accagcgtct ggacgaaggt tgcaccgagc gtgacgacgt caacttcctc aaacacaccc
     3781 tcgccttccg cgatgctgat ggcacgactc gcctggagta cagcgacgtg aagattacta
     3841 cgctgccgcc agctaaacgc gtttacggtg gcgaagcgga tgcagccgat aaggcggaag
     3901 cagccaataa gaaggagaag gcgaatggct gagatgaaaa acctgaaaat tgaggtggtg
     3961 cgctataacc cggaagtcga taccgcaccg catagcgcat tctatgaagt gccttatgac
     4021 gcaactacct cattactgga tgcgctgggc tacatcaaag acaacctggc accggacctg
     4081 agttaccgct ggtcctgccg tatggcgatt tgtggttcct gcggcatgat ggttaacaac
     4141 gtgccaaaac tggcatgtaa aaccttcctg cgtgattaca ccgacggtat gaaggttgaa
     4201 gcgttagcta acttcccgat tgaacgcgat ctggtggtcg atatgaccca cttcatcgaa
     4261 agtctggaag cgatcaaacc gtacatcatc ggcaactccc gcaccgcgga tcagggtact
     4321 aacatccaga ccccggcgca gatggcaaag tatcaccagt tctccggttg catcaactgt
     4381 ggtctgtgct acgccgcgtg cccgcagttt ggcctgaacc cagagttcat cggtccggct
     4441 gccattacgc tggcgcatcg ttataacgaa gatagccgcg accacggtaa gaaggagcgt
     4501 atggcgcagt tgaacagcca gaacggcgta tggagctgta ctttcgtggg ctattgctcc
     4561 gaagtctgcc cgaaacacgt cgatccggct gcggccattc agcagggcaa agtagaaagt
     4621 tcgaaagact ttcttatcgc gaccctgaaa ccacgctaag gagtgcaaca tgacgactaa
     4681 acgtaaaccg tatgtacggc caatgacgtc cacctggtgg aaaaaattgc cgttttatcg
     4741 cttttacatg ctgcgcgaag gcacggcggt tccggctgtg tggttcagca ttgaactgat
     4801 tttcgggctg tttgccctga aaaatggccc ggacgcctgg gcgggattcg tcgacttttt
     4861 acaaaacccg gttatcgtga tcattaacct gatcactctg gcggcagctc tgctgcacac
     4921 caaaacctgg tttgaactgg caccgaaagc ggccaatatc attgtaaaag acgaaaaaat
     4981 gggaccagag ccaattatca aaagtctctg ggcggtaact gtggttgcca ccatcgtaat
     5041 cctgtttgtt gccctgtact ggtaaggagc ctgagatgat taatccaaat ccaaagcgtt
     5101 ctgacgaacc ggtattctgg ggcctcttcg gggccggtgg tatgtggagc gcaattattg
     5161 cgccggtgat gatcctgctg gtgggtattc tgctgccact ggggctgttt ccgggtgatg
     5221 cgctgagcta cgagcgcgtt ctggcgttcg cgcagagctt cattggtcgc gtattcctgt
     5281 tcctgatgat cgttctgccg ctgtggtgtg gtttacaccg tatgcaccac gcgatgcacg
     5341 atctgaaaat tcacgtgcct gcgggcaaat gggttttcta cggtctggct gctatcctga
     5401 cagttgtcac gctgattggt atcgttacaa tctaacgtat cgccaatgta aatccggccc
     5461 gcctatggcg ggccgttttg tatggaaacc agaccttatg ttcaaaacga cgctctgcgc
     5521 cttattaatt accgcctctt gctccacatt tgctgcccct caacaaatca acgatattgt
     5581 gcatcgcaca attaccccgc ttatagagca acaaaagatc cccggtatgg cggtggcggt
     5641 aatttatcag ggtaaacctt attactttac ctggggctat gcggacatcg ccaaaaagca
     5701 gcccgtcaca cagcaaacgt tgtttgagtt aggttcggtc agcaaaacat ttacgggcgt
     5761 gcttggtggc gatgctattg ctcgagggga aatcaagtta agcgatcccg caacaaaata
     5821 ctggcctgaa cttaccgcta aacagtggaa tgggatcaca ctattacatc ttgcgaccta
     5881 caccgctggc ggcctgccat tgcagatgcc ggatgaagtg aaatcctcaa gcgacttgct
     5941 gcgcttctat caaaactggc agcctgcatg ggctccagga acacaacgtc tgtatgccaa
     6001 ctccagtatc ggtttgttcg gcgcactggc tgtgaagccg tctggtttga gttttgagca
     6061 ggcgatgcaa actcgtgtct tccagccact caaactcaac catacgtgga ttaatgtacc
     6121 gcccgcagaa gaaaagaatt acgcctgggg atatcgcgaa ggcaaggcag ttcatgtttc
     6181 gccaggggcg ttagatgctg aagcttatgg tgtgaagtcg accattgaag atatggcccg
     6241 ctgggtgcaa agcaatttaa ccccccttga tatcaatgag aaaacgcttc aacaagggat
     6301 acaactggca caatctcgct actggcaaac cggcgatatg tatcagggcc tgggctggga
     6361 aatgctggac tggccggtca atcctgacag catcattaac ggcagtgaca ataaaattgc
     6421 actggcagca cgcccggtaa aagcgattaa gcccccaact cctgcagtac gcgcatcatg
     6481 ggtacataaa acgggggcga ccggcggatt tggtagctat gtcgcgttta ttccagaaaa
     6541 agagctgggt atcgtgatgc tggctaacaa aaactatccc aatccagcga gagtcgccgc
     6601 cgcctgtcag attctcaacg ctctacagta aaatttcatc gggtccgaat tttcggacct
     6661 tttctgcgct tttccttgct gtcatctaca cttagaaaaa aaccagtaag gaaacattta
     6721 tgcgcctgct ccctctcgtt gccgcagcga cagctgcatt tctggtcgtt gcctgcagtt
     6781 ctcctacgcc gccgcgtggc gtgacagtag tgaataattt cgacgctaaa cgctatctcg
     6841 gtacctggta tgagattgcc cgttttgatc accgttttga acgtggactg gaaaaagtca
     6901 ccgcaacata cagtctgcgt gatggcggcg gcctgaatgt catcaataaa ggctataacc
     6961 ctgacagaga aatgtggcag cagagtgaag ggaaagcgta ctttaccggc gcaccaacac
     7021 gcgctgcgct gaaagtgtca ttctttggtc ttttctatgg cggttataac gtcattgcac
     7081 ttgatcggga ataccgccat gcgctggttt gcggcccgga ccgcgactac ctgtggatac
     7141 tctcccgcac gccaaccatt tctgacgaag tgaaacagga gatgctggca gtcgcgaccc
     7201 gggaagggtt tgatgtcagt aagtttattt gggtacagca gcccggtagt tagtgagtgc
     7261 tgagtttcag accaataatc cccaatacga ttaacgccag actcgccagg cgcatcgggt
     7321 tagcggactc accgagcagc acaatgccgg tgatagccgc gccgactgcg ccaatacccg
     7381 tccacacggc ataagccgtc cctactggta acgatttcat cgcccaggca agtagcgcca
     7441 tactgacaat catcgccgtc acggtaataa cactcggcgt caaacgacta aagccgtggg
     7501 tatatttcag gccaacggcc cataccactt ccagcagacc agcaataact aagataatcc
     7561 aggacatatc aggctccgga gaattggggc cgtccccggt gaaaagacgc gtttgcaggt
     7621 cgtcctgcaa agctgatggt tgaacggata ttttgccagg tggcagggga atttcaacta
     7681 ttaccttagt gactatcgca gaaaaaacaa acggcacgac acagctgtcg taccgttatt
     7741 gcttattgct attgctgcgc tttcgttgct gcgccagaaa tcgcgttacc gccatcagaa
     7801 atgtcttcac caacgccacg cgtggtgttg caggcagtta atactgttga aagcaccaga
     7861 acagaaaaga tcgctgcaat tgtcttcttc accataacgt cttcctttta ggtaatgtta
     7921 tttatgtttg cctatagcaa attaataata gacaacatcg ccaaaaatga cggaaatctg
     7981 atgatttttc ggaagagaag aaaaattagc tggcagcgcg agagatggag ttgccgagat
     8041 gtttgatgtc ttcgccgaaa ccgcgagcgg tgttacagcc cgtgagcagc gtactggcaa
     8101 gcaaaacaag aacgataagg cgtttcatca tctctgacct gaataagtga tggtgcagcc
     8161 tgcaggccgc accacaaccg cattacttca cgcgagagac gtattcacca gagcgggtat
     8221 ccactttgat gacttcgccg atttgtacga acagcggaac cttaaccaca gcgccagtag
     8281 acagggtagc cggtttgccg ccagtacctg cggtatcacc tttcaggccc ggatcggtat
     8341 caacgatttc cagttcaacg aagttcggcg gagtaacgga gatcggctga ccattccaca
     8401 gagttacgat acactctgcc tgatccagca gccatttagc gttatcgcca attgcttttg
     8461 catcagcaga cagctgctcg aaagtttcgt tgttcatgaa gtgccagaac tcaccgtcgt
     8521 tgtacaggta agtcaggttc atatcgacaa catcagcgcc ttcagcggaa tcagtagatt
     8581 tgaaggtttt ttctacgcga gtaccggtca gcagacgacg cagtttaacg cgagcaaatg
     8641 cctggccttt acccggtttt acgaattcac tcgcttcaac cgcgtaaggt tcgccgtcta
     8701 acatgatttt aagaccagca cgaaaatcgt tgctatagta cgttgccata aggccctctg
     8761 aaatttgtta attggtagct aagccacaaa atggcgcata ttgtaaccct aaatacccca
     8821 tccagagaag attggttaac gcaacttgcc gatgttgtga ccgatcctga tgaacttctg
     8881 cgtcttttga atatagacgc ggacgaaaaa ctgttggccg gacgcagcgc caaaaagctg
     8941 tttgccctgc gtgtgccccg ctcatttatc gatcgcatgg agaaaggcaa tccggacgat
     9001 cctcttttgc gtcaggtact tacctcgcaa gatgagtttg tcgtcgcgtc cggattctcc
     9061 accgacccac tggaagaaca gcacagcgta gtgcctggtt tgttgcataa ataccacaac
     9121 cgggcgcttt tgctggtcaa aggcggctgc gcggtaaatt gccgctattg cttccgtcgc
     9181 cacttcccct atgccgaaaa tcagggcaac aagcgtaact ggcagactgc acttgagtat
     9241 gttgctgcgc atccggaact ggacgagatg attttctccg gcggcgatcc gctgatggcg
     9301 aaagatcacg agctggactg gttgctcaca caactggaag ccatcccgca tatcaaacgt
     9361 ctgcggattc acagtcgtct gccgattgtg atcccggcac gcatcacaga tgcgctggtt
     9421 gaacgctttt cacattctac gctgcaaatc ctgctggtga atcacatcaa ccatgccaat
     9481 gagatagatg aaacattccg tcaggcgatg gctaagttgc gccgggtagg cgttactttg
     9541 ctgaaccaga gcgttctgtt acgtgatgtg aacgataacg cacaaacgct ggcaaacctg
     9601 agtaatgcgt tgttcgatgc cggcgtgatg ccgtattacc tgcatgtgct cgataaagta
     9661 cagggcgcag cgcattttat ggtgagtgat gacgaagcac ggcagattat gcgtgagttg
     9721 ctgacattgg tgtcgggata tctggtgccg aaactggcgc gagaaattgg cggcgaaccc
     9781 agcaaaacgc cgctggatct ccagctacgc cagcagttac tgattaaaca gggaagttaa
     9841 acattaaaat tgcctgatgc gctacgctta tcaggcctac atcgtgcatt gaaattgaat
     9901 ggatttgcaa tgaactgtag gccggataag gcgtttacgc cgcatccggc aagagcaaca
     9961 aacgcaagta cagcaacctg tcattaaact gagaaattta atctttgccc gttgcataac
    10021 ctttaattat tcatatgcat tgctgttgtt actttttata tagctaacac caataattaa
    10081 cctttctttt ctgtttatat agagtgagca cggctattta tgttatttta acaactgtta
    10141 ctaccaagcc catttatctg gcttataaat taaaattaat tatttaattg agaaatggtt
    10201 agggagaacc tacatggcca taagcatcaa gggtgttaat accggtgtta ttcgcaagag
    10261 taataatttc attgcactgg cgctgaaaat taaagaacct cgcaataaag aatcgttgtt
    10321 ctttatgtct gtcatggaac tgcgcgacct gctgattgcg ctggaaagtc gtctgcatca
    10381 aaagcataaa ctggatgctg ctgcacgcct tcagtatgag caagctcgcg ataaagtcat
    10441 taagaaaatg gcagaaaaca tcccagaaat tctggttgat gagcttaaaa atgccgatat
    10501 taatcgtcgg gttaacacgc tggaacttac cgataatcaa ggcgaaaatc ttaccttcgt
    10561 attaacgcta catgacggta gcaaatgtga gttagtcgtc aatgagttgc agattgaaat
    10621 gctagcgcga gcaatcattc atgcaattaa taatgcggaa atgcgtgaac tggcattacg
    10681 tattacctca ctgttagatt tcctgccgtt atatgacgtt gactgccagg aaaatggcaa
    10741 tctggaatat gacacctatt cccaaccgga atggaaacat aacttgttcg accattatct
    10801 ggcggtgctt taccgcttta aagatgaaag tggcaaagaa caatttagcg gcgcagtggt
    10861 gaaaacgcgt gaagcaacgc cgggtaaaga agtagaggcg atcactcgcc gaatgcttga
    10921 tttcagccca cgactgaaaa aactcgcggg tgtgccatgt caggtctatg ttcgcaccgt
    10981 agcggcgaat aacgcccaac cgctaaccca ggatcaatgc ttacgcgcgc tgcatcactt
    11041 acgtgttcaa tccaccagca aaactgcacc acaggcgaaa taatctcatc tttgctaatg
    11101 cgaggctgga gccatccagc ctgaaatgac tgataacgtg atcgttggtc atgccggatg
    11161 cggcgtaaac gccttatccg gcctacaa
//
LOCUS       DADMJE010000402        11148 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.guided.141, whole genome shotgun sequence.
ACCESSION   DADMJE010000402 DADMJE010000000
VERSION     DADMJE010000402.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 11148)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11148)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11148
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.guided.141"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            556..1371
                     /gene="sul2"
                     /locus_tag="JN001_004363"
     CDS             556..1371
                     /gene="sul2"
                     /locus_tag="JN001_004363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001043260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfonamide-resistant dihydropteroate synthase
                     Sul2"
                     /protein_id="HAY9055325.1"
                     /translation="MNKSLIIFGIVNITSDSFSDGGRYLAPDAAIAQARKLMAEGADV
                     IDLGPASSNPDAAPVSSDTEIARIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAY
                     LNDIRGFPDAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAA
                     LTGAGIKRNRLVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRA
                     LTGRGPGDVGAATLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR"
     gene            1432..2235
                     /locus_tag="JN001_004364"
                     /note="aph(3'')-Ib"
     CDS             1432..2235
                     /locus_tag="JN001_004364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010890156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(3'')-Ib"
                     /protein_id="HAY9055326.1"
                     /translation="MNRTNIFFGESHSDWLPVRGGESGDFVFRRGDGHAFAKIAPASR
                     RGELAGERDRLIWLKGRGVACPEVINWQEEQEGACLVITAIPGVPAADLSGADLLKAW
                     PSMGQQLGAVHSLSVDQCPFERRLSRMFGRAVDVVSRNAVNPDFLPDEDKSTPQLDLL
                     ARVERELPVRLDQERTDMVVCHGDPCMPNFMVDPKTLQCTGLIDLGRLGTADRYADLA
                     LMIANAEENWAAPDEAERAFAVLFNVLGIEAPDRERLAFYLRLDPLTWG"
     gene            2235..3071
                     /locus_tag="JN001_004365"
     CDS             2235..3071
                     /locus_tag="JN001_004365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000480972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoglycoside O-phosphotransferase APH(6)-Id"
                     /protein_id="HAY9055327.1"
                     /translation="MFMPPVFPAHWHVSQPVLIADTFSSLVWKVSLPDGTPAIVKGLK
                     PIEDIADELRGADYLVWRNGRGAVRLLGRENNLMLLEYAGERMLSHIVAEHGDYQATE
                     IAAELMAKLYAASEEPLPSALLPIRDRFAALFQRARDDQNAGCQTDYVHAAIIADQMM
                     SNASELRGLHGDLHHENIMFSSRGWLVIDPVGLVGEVGFGAANMFYDPADRDDLCLDP
                     RRIAQMADAFSRALDVDPRRLLDQAYAYGCLSAAWNADGEEEQRDLAIAAAIKQVRQT
                     SY"
     gene            complement(3043..3525)
                     /locus_tag="JN001_004366"
     CDS             complement(3043..3525)
                     /locus_tag="JN001_004366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001956173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055328.1"
                     /translation="MFSEFCGSPYQIVDEYYPAFAALMAEQGKELPGYVQREFEEFLQ
                     CGRLEHGFLRVRCESCHAEHLVAFSCKRRGFCPSCGARRMAESAALLVDEVLPEQPMR
                     QWVLSFPFQLRFLFGVVCGKGRNPTLRLWPAIFSGEIDVFPGDRRSRLISSMTSVAPA
                     "
     gene            complement(3688..5265)
                     /locus_tag="JN001_004367"
     CDS             complement(3688..5265)
                     /locus_tag="JN001_004367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001513488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HAY9055329.1"
                     /translation="MRQNLPVTGRNLELPKDANILSTTSPQSHITYVNPDFIKISGFT
                     EEELLGQPHNIVRHPDMPPAAFEHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAYVTPI
                     AKNGSIVEYQSVRTKPEPEQVLAAEKLYAQLRSGKAARPKLAASFSVKILLLIWGSII
                     SSAMAAGMLTDTSISSLLLATLMSGSLSSVSVLAILSPLGRLVERARNISNNPLSQSL
                     YTGRTDEFGQIEFALRMMQAETGAIVGRIGDASNRLSEHTRGLLKDIESSNVLTVEQQ
                     AETDQIATAVNQMVASIQEVASNAQHAADAAGRADTETASGQRLVAHTSQSITALEGE
                     IRQATQVIHELEGQSNEISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD
                     EVRSLAARTQQSTTDIQSMISALQERAQSAVTVMEQSSRQAHTSVAHAEEAATALDGI
                     GQRVNEITDMNAQIATAVEQQGAVSEDINRSIINIRDAADTNVQTGQNNLQSAKSVAQ
                     LTSALSELAKQFWEKRG"
     gene            complement(5419..5586)
                     /locus_tag="JN001_004368"
     CDS             complement(5419..5586)
                     /locus_tag="JN001_004368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055330.1"
                     /translation="MPLHDVSLVEGGLSALSVPLCLKAHFCQAEIYNLRGHVSKNGKA
                     DSILTKRRGPA"
     gene            5575..6135
                     /locus_tag="JN001_004369"
     CDS             5575..6135
                     /locus_tag="JN001_004369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_005220837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HAY9055331.1"
                     /translation="MQGHRIGYVRVSSFDQNPERQLEQTQVSKVFTDKASGKDTQRPQ
                     LEALLSFVREGDTVVVHSMDRLARNLDDLRRLVQKLTQRGVRIEFLKEGLVFTGEDSP
                     MANLMLSVMGAFAEFERALIRERQREGIALAKQRGAYRGRKKALSDEQAATLRQRATA
                     GEPKAQLAREFNISRETLYQYLRTDD"
     gene            6139..9105
                     /locus_tag="JN001_004370"
     CDS             6139..9105
                     /locus_tag="JN001_004370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001138014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tn3-like element TnAs1 family transposase"
                     /protein_id="HAY9055332.1"
                     /translation="MPRRLILSATERDTLLALPESQDDLIRYYTFNDSDLSLIRQRRG
                     DANRLGFAVQLCLLRYPGYALGTDSELPEPVILWVAKQVQAEPASWAKYGERDVTRRE
                     HAQELRTYLQLAPFGLSDFRALVRELTELAQQTDKGLLLAGQALESLRQKRRILPALS
                     VIDRACSEAIARANRRVYRALVEPLTDSHRAKLDELLKLKAGSSITWLTWLRQAPLKP
                     NSRHMLEHIERLKTFQLVDLPEGLGRHIHQNRLLKLAREGGQMTPKDLGKFEPQRRYA
                     TLAAVVLESTATVIDELVDLHDRILVKLFSGAKHKHQQQFQKQGKAINDKVRLYSRIG
                     QALLEAKESGSDPYAAIEAVIPWDEFTESVSEAELLARPEGFDHLHLVGENFATLRRY
                     TPALLEVLELRAAPAAQGVLAAVQTLREMNADNLRKVPADAPTAFIKPRWKPLVITPE
                     GLDRKFYEICALSELKNALRSGDIWVKGSRQFRDFDDYLLPAEKFAALKREQALPLAI
                     NPNSDQYLEERLQLLDEQLATVTRLAKDNELPDAILTESGLKITPLDAAVPDRAQALI
                     DQTSQLLPRIKITELLMDVDDWTGFSRHFTHLKDGAEAKDRTLLLSAILGDAINLGLT
                     KMAESSPGLTYAKLSWLQAWHIRDETYSAALAELVNHQYRHAFAAHWGDGTTSSSDGQ
                     RFRAGGRGESTGHVNPKYGSEPGRLFYTHISDQYAPFSTRVVNVGVRDSTYVLDGLLY
                     HESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGETKLYVPQGVQAYPTLRP
                     LIGGTLNIKHVRAHWDDILRLASSIKQGTVTASLMLRKLGSYPRQNGLAVALRELGRI
                     ERTLFILDWLQSVELRRRVHAGLNKGEARNSLARAVFFNRLGEIRDRSFEQQRYRASG
                     LNLVTAAIVLWNTVYLERATQGLVEAGKPVDGELLQFLSPLGWEHINLTGDYVWRQSR
                     RLEDGKFRPLRMPGKP"
     gene            complement(9271..9660)
                     /locus_tag="JN001_004371"
     CDS             complement(9271..9660)
                     /locus_tag="JN001_004371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000102614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HAY9055333.1"
                     /translation="MSTELNSGTVGGFGHMGPNDPYNDGHSGSGSSGGSFNGGGNGGH
                     DNSSGSSYTASFGLITGRHPITVPGTKNINSVDLSAVINNIIHHEGARNNMYLDTANN
                     VRVGVTGTGWQCLATAGISAEGKRTFR"
     gene            9830..10318
                     /locus_tag="JN001_004372"
     CDS             9830..10318
                     /locus_tag="JN001_004372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011161230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="entry exclusion protein 1"
                     /protein_id="HAY9055334.1"
                     /translation="MFCCYNTVHTGDTVTFMAWHTVQETLKLTGKSRSQLYRDMAKGL
                     VSYRTGKNDRREFETSELIRAYGELRTSETPKRHKEGHSKSVVSQAENAQLDVIQQKL
                     DALQQTVTLMLEDKMAREAENRLRNEEREQLQAEISRLADALAQEKKRGFWSRLFRSG
                     SE"
BASE COUNT         2531 a         3162 c         3039 g         2416 t
ORIGIN      
        1 aacccggaaa gacacgacaa aacgccactg gcagcagcca ttagtaacag gagtgcacga
       61 gaagatagat taagaggtct tgaagtagag gcctgactgc ggctacactg aaagaacagt
      121 tttggtaatg gcggtctcgt gaaccctgtt accgggttaa gcagttcccc aactgactta
      181 accttcgaac aaaccgcctc cccaggcggt tttttcgttt acagagcaag agattacgat
      241 tcattgaaaa ggatctcaag aagatccttt gtagattact atcaattaat cttccgaaca
      301 tgacaccagt cactgttgat tacggttaaa ccgctccgta acaggtttcc ctcgtattgg
      361 tgacttgcag caccaaagaa gcaaaaaaga taaatatatc tacttattga gagatgatat
      421 atttatttcc aaaatgctac agatacatca tcatgaaacg gatcaccgca aacaggttac
      481 tcgcctgggg attccctttc gacccgagca tccgtatgag actcatgctc gattattatt
      541 attatagaag cccccatgaa taaatcgctc atcattttcg gcatcgtcaa cataacctcg
      601 gacagtttct ccgatggagg ccggtatctg gcgccagacg cagccattgc gcaggcgcgt
      661 aagctgatgg ccgagggggc agatgtgatc gacctcggtc cggcatccag caatcccgac
      721 gccgcgcctg tttcgtccga cacagaaatc gcgcgtatcg cgccggtgct ggacgcgctc
      781 aaggcagatg gcattcccgt ctcgctcgac agttatcaac ccgcgacgca agcctatgcc
      841 ttgtcgcgtg gtgtggccta tctcaatgat attcgcggtt ttccagacgc tgcgttctat
      901 ccgcaattgg cgaaatcatc tgccaaactc gtcgttatgc attcggtgca agacgggcag
      961 gcagatcggc gcgaggcacc cgctggcgac atcatggatc acattgcggc gttctttgac
     1021 gcgcgcatcg cggcgctgac gggtgccggt atcaaacgca accgccttgt ccttgatccc
     1081 ggcatggggt tttttctggg ggctgctccc gaaacctcgc tctcggtgct ggcgcggttc
     1141 gatgaattgc ggctgcgctt cgatttgccg gtgcttctgt ctgtttcgcg caaatccttt
     1201 ctgcgcgcgc tcacaggccg tggtccgggg gatgtcgggg ccgcgacact cgctgcagag
     1261 cttgccgccg ccgcaggtgg agctgacttc atccgcacac acgagccgcg ccccttgcgc
     1321 gacgggctgg cggtattggc ggcgctgaaa gaaaccgcaa gaattcgtta actgcacatt
     1381 cgggatattt ctctatattc gcgcttcatc agaaaactga aggaacctcc attgaatcga
     1441 actaatattt tttttggtga atcgcattct gactggttgc ctgtcagagg cggagaatct
     1501 ggtgattttg tttttcgacg tggtgacggg catgccttcg cgaaaatcgc acctgcttcc
     1561 cgccgcggtg agctcgctgg agagcgtgac cgcctcattt ggctcaaagg tcgaggtgtg
     1621 gcttgccccg aggtcatcaa ctggcaggag gaacaggagg gtgcatgctt ggtgataacg
     1681 gcaattccgg gagtaccggc ggctgatctg tctggagcgg atttgctcaa agcgtggccg
     1741 tcaatggggc agcaacttgg cgctgttcac agcctatcgg ttgatcaatg tccgtttgag
     1801 cgcaggctgt cgcgaatgtt cggacgcgcc gttgatgtgg tgtcccgcaa tgccgtcaat
     1861 cccgacttct taccggacga ggacaagagt acgccgcagc tcgatctttt ggctcgtgtc
     1921 gaacgagagc taccggtgcg gctcgaccaa gagcgcaccg atatggttgt ttgccatggt
     1981 gatccctgca tgccgaactt catggtggac cctaaaactc ttcaatgcac gggtctgatc
     2041 gaccttgggc ggctcggaac agcagatcgc tatgccgatt tggcactcat gattgctaac
     2101 gccgaagaga actgggcagc gccagatgaa gcagagcgcg ccttcgctgt cctattcaat
     2161 gtattgggga tcgaagcccc cgaccgcgaa cgccttgcct tctatctgcg attggaccct
     2221 ctgacttggg gttgatgttc atgccgcctg tttttcctgc tcattggcac gtttcgcaac
     2281 ctgttctcat tgcggacacc ttttccagcc tcgtttggaa agtttcattg ccagacggga
     2341 ctcctgcaat cgtcaaggga ttgaaaccta tagaagacat tgctgatgaa ctgcgcgggg
     2401 ccgactatct ggtatggcgc aatgggaggg gagcagtccg gttgctcggt cgtgagaaca
     2461 atctgatgtt gctcgaatat gccggggagc gaatgctctc tcacatcgtt gccgagcacg
     2521 gcgactacca ggcgaccgaa attgcagcgg aactaatggc gaagctgtat gccgcatctg
     2581 aggaacccct gccttctgcc cttctcccga tccgggatcg ctttgcagct ttgtttcagc
     2641 gggcgcgcga tgatcaaaac gcaggttgtc aaactgacta cgtccacgcg gcgattatag
     2701 ccgatcaaat gatgagcaat gcctcggaac tgcgtgggct acatggcgat ctgcatcatg
     2761 aaaacatcat gttctccagt cgcggctggc tggtgataga tcccgtcggt ctggtcggtg
     2821 aagtgggctt tggcgccgcc aatatgttct acgatccggc tgacagagac gacctttgtc
     2881 tcgatcctag acgcattgca cagatggcgg acgcattctc tcgtgcgctg gacgtcgatc
     2941 cgcgtcgcct gctcgaccag gcgtacgctt atgggtgcct ttccgcagct tggaacgcgg
     3001 atggagaaga ggagcaacgc gatctagcta tcgcggccgc gatcaagcag gtgcgacaga
     3061 cgtcatacta gatatcaagc gacttctcct atcccctggg aacacatcaa tctcaccgga
     3121 gaatatcgct ggccaaagcc ttagcgtagg attccgcccc ttcccgcaaa cgaccccaaa
     3181 caggaaacgc agctgaaacg ggaagctcaa cacccactga cgcatgggtt gttcaggcag
     3241 tacttcatca accagcaagg cggcactttc ggccatccgc cgcgccccac agctcgggca
     3301 gaaaccgcga cgcttacagc tgaaagcgac caggtgctcg gcgtggcaag actcgcagcg
     3361 aacccgtaga aagccatgct ccagccgccc gcattggaga aattcttcaa attcccgttg
     3421 cacatagccc ggcaattcct ttccctgctc tgccataagc gcagcgaatg ccgggtaata
     3481 ctcgtcaacg atctgatagg gggaaccgca gaattcggaa aaaatcgtac gctaagctaa
     3541 cggtgttctc gtgacagctc tttgactagg ctttctaagg ccattctgat agccctgact
     3601 tcctgaaaag ccatggctaa aatttgtgcg gctaaaaggg ataaccgatg gtaaagtaag
     3661 ttatccctgt cgagatactg aaaagcgtta tcctcgtttt tcccaaaact gttttgccag
     3721 ttcgctcaga gcgctagtta actgagcgac agatttcgca ctttgcaaat tattctgccc
     3781 ggtctgtaca ttggtatcag cagcatcgcg tatattgata atactgcggt ttatgtcttc
     3841 acttactgct ccctgctgct cgaccgcagt cgctatttgc gcgttcatgt cggtaatttc
     3901 gttaacgcgt tggccaattc catcaagagc tgtagctgct tcctctgcgt gagctacact
     3961 cgtgtgcgct tgccgactac tttgctccat gactgtaaca gcggattgcg ctcgctcttg
     4021 tagagcgctg atcatgcttt gaatatccgt tgtcgattgc tgtgtgcgag cagcaagact
     4081 gcgaacctca tcggcgacaa cagcaaaacc acgcccctgc tcaccagcac gcgcggcctc
     4141 aattgctgcg ttgagtgcca acaaattcgt ttgctcggcg atccctcgta taacgtcaag
     4201 aacttttgat atctcgttac tttgaccttc aagctcatga ataacctgag tggcttgcct
     4261 aatttcacct tcaagggcag tgattgactg gcttgtgtgg gctaccagac gctggccaga
     4321 tgccgtctca gtgtctgctc ttccggccgc atctgcagca tgctgtgcat tgctcgcaac
     4381 ctcttgaatg cttgccacca tttggtttac tgccgttgct atttgatctg tctctgcctg
     4441 ctgctcaact gtaagtacat tgcttgactc aatatccttt agtaggcctc gggtgtgttc
     4501 gctaagccga tttgatgcat cacctatgcg acctactatg gcgcctgttt cagcttgcat
     4561 cattcgtaaa gcaaactcta tttggccaaa ctcatcggtg cgcccagtgt agagggattg
     4621 acttaatggg ttattggaaa tattcctggc tctttcaacc agtcttccaa gaggagagag
     4681 aatagccaaa acactaacag agcttaagct tcctgacatt aaagtggcta acaataagct
     4741 gcttattgat gtatcagtaa gcatgccggc agccattgcg cttgatataa tactacccca
     4801 tatgagcaag agtattttca cggaaaagct agcagccaat ttcggcctcg cggccttccc
     4861 gcttctcaat tgagcatata atttttccgc agccaaaacc tgctcaggtt caggcttggt
     4921 ccttacagac tggtattcaa caatcgaacc attcttagct attggcgtta cataagcact
     4981 tacccaatag tggtcgccat ttttacagcg attttttact agccccatcc atgagcggcc
     5041 agattttaat gtactccaca tatgctcaaa tgcagcaggc ggcatatctg ggtgtcttac
     5101 gatgttgtga ggctggccta atagttcttc ctcagtgaaa ccactgattt taatgaagtc
     5161 aggattaacg tacgtgatat ggctttgagg ggaggtagtc gaaagaatat tggcatcttt
     5221 tgggagttct aagtttcgac ccgtcactgg taaattctgg cgcataagaa cctcaagggt
     5281 tggctgtttt attttattgt tttcggcatt aagcccaatt tcttgagcgt tacgataaag
     5341 ctagcatgga aacgataggt gcaagcaagt taagggttgc atcgcgcatg tcaatctagg
     5401 ctatacccta acttgatgtc aggcagggcc gcgccgcttc gtcagaatag agtctgcttt
     5461 cccatttttt gacacatgcc cgcgaaggtt atagatttca gcctgacaga aatgggcttt
     5521 gaggcacaac ggaacagaaa gtgcacttaa gccgccttca accaaggaga catcgtgcag
     5581 gggcaccgca tcggctacgt ccgggtcagc agctttgacc agaacccgga acgccagctg
     5641 gaacaaaccc aggtgagcaa ggtgttcacc gacaaggcat cgggcaagga cacccagcgc
     5701 ccccagctcg aagcgctgct gagcttcgtc cgcgaaggcg atacagtggt ggtgcacagc
     5761 atggatcggc tggcccgcaa cctcgatgac ctgcgtcgct tggtacagaa gctgactcag
     5821 cgcggcgtgc gcatcgagtt cctgaaggag ggcctggtgt tcactggcga ggactcgccg
     5881 atggccaacc tgatgctgtc ggtgatgggg gccttcgctg agttcgagcg cgccctgatc
     5941 cgcgagcggc agcgtgaggg catcgccttg gccaagcagc gtggcgcgta ccggggccgc
     6001 aagaaagccc tgtccgatga gcaggctgct accctgcggc agcgagcgac ggccggcgag
     6061 cccaaggcgc agcttgcccg cgagttcaac atcagccggg aaaccctcta ccagtacctc
     6121 cgcacggacg actgacacat gccgcgtcgc ttgatcctct cggccacgga gcgggacacc
     6181 ctgcttgcgc tgccggaaag ccaggatgac ctgatccgct actacacctt caacgactcc
     6241 gacctgtcgc tgatccgcca gcgacgcggc gacgccaacc gcctcggctt cgccgtgcag
     6301 ctctgcctgc tgcgctaccc cggttacgcg ctgggaaccg acagcgagct gcccgagccg
     6361 gtcatcctgt gggtggcgaa gcaagtccag gccgagccgg cgagctgggc aaagtacggc
     6421 gagcgcgacg tgacccgtcg cgagcatgcc caggaactgc gcacctacct gcaactggcc
     6481 ccgttcggcc tgtccgactt ccgcgccctg gtgcgcgagc taaccgagct ggcccagcag
     6541 accgacaaag gcttgctgct ggccggtcag gccctggaga gcctacggca gaaacgacgc
     6601 atcctgccgg cgctgagcgt gattgaccgg gcctgctcgg aagccattgc gcgagccaat
     6661 cggcgggtct accgcgccct ggtcgaacca ctcacggact cgcatcgggc caagctggac
     6721 gagctgttga agctcaaggc cggcagcagc atcacctggt tgacctggct gcgccaggca
     6781 ccgctgaaac ccaactctcg gcacatgctg gaacacatcg agcggctgaa gacatttcag
     6841 ttggtggact tgcccgaagg cctgggccgg cacatccacc agaaccgcct gctcaagctg
     6901 gcccgcgagg gtgggcagat gacgcccaaa gacctcggta agttcgagcc gcagcgccgc
     6961 tacgcgaccc tggccgccgt ggtgctggag agcaccgcga ccgtgatcga tgagctggtc
     7021 gatctgcatg accgcatcct ggtcaagctg ttcagcggcg cgaagcacaa gcatcagcag
     7081 cagttccaga agcagggcaa ggcgatcaac gacaaggtgc gcctgtactc caggatcggc
     7141 caggcgctgc tggaagcgaa ggaaagcggc agcgacccct atgccgccat cgaggcggtg
     7201 attccctggg acgagttcac cgagagcgtc agcgaggccg agctgctggc ccggccggaa
     7261 ggcttcgacc acctgcacct ggtcggcgag aacttcgcca ccctgcgccg ttacacgccg
     7321 gccttgctgg aggtgctgga actgcgcgcc gcgccggccg cgcaaggcgt gctggcagcc
     7381 gtgcagaccc tgcgtgagat gaacgccgac aacctgcgca aggtgccggc cgatgcaccc
     7441 acggccttca tcaagccgcg ctggaagccg ctggtgatca ccccggaagg cctcgaccgg
     7501 aaattctacg aaatctgcgc cctgtccgag ctgaagaacg ccctgcgctc cggcgacatc
     7561 tgggtcaagg gctcgcggca gttccgcgac ttcgacgact acctgctgcc ggccgagaag
     7621 ttcgccgcac tcaagcgcga gcaggccctg cccctggcga tcaacccgaa cagcgaccag
     7681 tacctggaag agcgtttgca gctgctggac gagcagttgg ccaccgtcac ccgcctggcc
     7741 aaggacaacg agctgcccga tgccatcctc accgagtcag ggctgaaaat caccccgctg
     7801 gatgcggcgg tgccggatcg ggcgcaggcg ctgatcgacc aaaccagcca gttactgccg
     7861 cgcatcaaga tcaccgaact gctgatggac gtggacgact ggacgggctt cagccgccac
     7921 ttcacccact tgaaggacgg ggccgaggcc aaagacagga cgttgctgct gtccgcaatc
     7981 ctcggtgatg cgatcaacct cgggctgacc aagatggccg agtcgagccc cggcctgacc
     8041 tacgccaagc tgtcctggct gcaagcctgg cacatccgcg acgaaaccta ttcggcggcc
     8101 ttggccgagc tggtcaacca ccagtatcgc cacgcctttg ccgcccactg gggcgacggc
     8161 acgacctcat cctccgatgg ccagcgcttc cgcgcgggtg gccggggcga gagcaccggg
     8221 cacgtcaacc cgaagtacgg tagcgagccg ggacggctgt tctataccca tatctccgac
     8281 cagtacgcgc cgttcagcac ccgcgtggtg aatgtcggcg tccgcgattc cacctatgtg
     8341 ctcgacggcc tgctgtacca cgagtccgac ctgcggatcg aggagcacta caccgacacg
     8401 gccggcttca ccgatcacgt ctttgccctg atgcacctgc taggcttccg cttcgcgccg
     8461 cgcatccgcg acctcggcga aaccaagctg tacgtgccgc agggcgtgca agcctacccg
     8521 acgttgcgcc cgctgatcgg cggcaccctg aacatcaagc acgtgcgtgc ccactgggac
     8581 gacatcctgc gcctggccag ctcgatcaag cagggcaccg tcaccgcctc gctgatgctg
     8641 cgcaagctcg gcagctaccc gcgccagaac ggactggccg tggccctgcg cgagctgggc
     8701 cggatcgagc gcacgctgtt catcctggac tggctgcaaa gtgttgaact gcgccgccgc
     8761 gtgcatgccg gcctgaacaa aggtgaggcg cgcaactcgc tggccagggc ggtgttcttc
     8821 aaccgccttg gggaaatcag ggatcggagc ttcgagcagc agcgctaccg ggccagcggc
     8881 ctcaacctgg tgacggcggc tatcgtgctg tggaacacgg tgtacctgga acgcgccacc
     8941 caggggttgg tcgaggccgg caagccggtg gacggcgagc tgctgcaatt cctgtcgccg
     9001 ctgggctggg agcacatcaa cctaaccggc gattacgtct ggcggcagag ccgcagactg
     9061 gaagacggga agtttcggcc cttacggatg cccggaaaac cttagcgtac gattttttcc
     9121 gaattctgcg ggctcccctg atagagaagg gtttgctcgg gtcggtggct ctggtaacga
     9181 ccagtatccc gatcccggct ggccgtcctg gccgccacat gaggcatgtt ccgcgtcctt
     9241 gcaatactgt gtttacatac agtctatcgc ttagcggaaa gttcttttac cctcagccga
     9301 aatgcctgcc gttgctagac attgccagcc agtgcccgtc actcccactc ttacattgtt
     9361 cgcagtatct aggtacatgt tattgcgtgc accttcatga tgtataatgt tattaatgac
     9421 agcagaaaga tcgacagaat taatattctt cgtacctggg acagttatcg ggtgtcggcc
     9481 agtgatgaga ccaaaggatg cagtataaga tgaaccacta ctattatcat ggccaccatt
     9541 accaccaccg ttaaaactac ctcccgaact tccagagccg ctatgaccat cattgtaggg
     9601 gtcatttggt cccatgtgac caaaaccacc gacagtaccg ctatttaact ctgtactcat
     9661 aaaattatcc tctttgactt ttaaaaacag caaaaactgt atttataaca atgtgtttat
     9721 atacagtgtt cgaaatacta cgcccgtcaa aaccacaccg tcaacaggtt ttttgtgtat
     9781 ttttcacgcc tcacgggcag cctcagacct tttgtgttaa aacagtaata tgttctgctg
     9841 ttacaatacg gtacacacag gagacactgt cacttttatg gcatggcaca cagttcaaga
     9901 gacactgaaa ttaacaggaa agtcgcgctc gcaattatat cgtgacatgg ctaaaggcct
     9961 tgtcagctat cgcacaggaa aaaatgatcg ccgggagttc gagaccagtg aactgattcg
    10021 ggcctatggc gagctgcgca cttctgagac accaaaaagg cacaaggagg gacactccaa
    10081 atctgtcgtt agccaggcgg aaaatgctca gctagacgtc attcagcaga aactggacgc
    10141 tctgcagcag actgttaccc taatgcttga agacaagatg gcgcgggaag cagaaaaccg
    10201 cctgcgaaat gaggagaggg aacaactaca ggccgaaatt agccgtctgg ctgacgcgct
    10261 ggcacaggaa aaaaagcggg gattctggtc gcggctgttt cgctccggtt cagagtaaca
    10321 gtgcaggtga ctctgattta ccataacatc tgttatcagc accgcctgag aggccctcag
    10381 ggcgtttctg acgggaaacc ggtaaaacag gcaacaaacc acccgaaaac ccgccagaaa
    10441 cgcgcaggct ctgtttttac ggcatgcatg agtatgcgca caagtgcata gcgcggaaat
    10501 tcacaccatt cagccggggt aagtcctgtt tccggcgttc ttcccatccg aaaacggtga
    10561 acggggacgc aatttattgc gtggccgtga agcgttgccg gcgcagccgg aaaacccgct
    10621 gtcagcacgt tcaggaaggg ggtgatgtac aaatggcaca gaggatgaaa gtgacgtatg
    10681 agctgaagga atgatgtaaa agttatgtaa aagtgatgta aaagtgatgt atgaactgaa
    10741 ggagcgatgt aattctgtag tcaggaagaa taacccgttc atgcaggcat gaacgataca
    10801 gtgaggaacg ctttttttgt cacgatctcc ccttaacctg cgtaaatcac ccgccatggt
    10861 tgattatttt tcaacctcaa aatggtcata cacctaacgc agccgcgatt ttcatcgcaa
    10921 ctgcatgaat taaaagaaaa aaaaggaata tttcgttttc acgagtaata cccgggtatt
    10981 aaaaatccac tgtaattaca tgaaaataaa gaaataaaag gtaataccgg agtattacca
    11041 cgtacgcggg caagcgaaaa agctataacg cttcccggcc gacaggcgac ccaaaatcca
    11101 caggggcatg caggttctct tcagtaacct gcgccattaa atcaaaaa
//
LOCUS       DADMJE010000403         3475 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.guided.251, whole genome shotgun sequence.
ACCESSION   DADMJE010000403 DADMJE010000000
VERSION     DADMJE010000403.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.guided.251"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            163..650
                     /locus_tag="JN001_004373"
                     /pseudo
     CDS             163..650
                     /locus_tag="JN001_004373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rtcB domain protein"
     gene            647..1261
                     /locus_tag="JN001_004374"
     CDS             647..1261
                     /locus_tag="JN001_004374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY9055335.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="JN001_004375"
     CDS             complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="JN001_004375"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY9055336.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3036..>3475
                     /gene="gpt"
                     /locus_tag="JN001_004376"
     CDS             3036..>3475
                     /gene="gpt"
                     /locus_tag="JN001_004376"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY9055337.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTRIEQPWDMGVVFVP"
BASE COUNT          846 a          855 c          935 g          839 t
ORIGIN      
        1 caccccatta taaggggtac gaataaagta acggggcagt ctattttaca gcggcatatt
       61 gcctcgttct cgcatcatgg tttgcctcaa ggcagtgacg acgcgctacg gtatattgcg
      121 gaacatgacg atgcgctggc gtttgcgtgt attaatcgcc agatgatcgc tttgcgcata
      181 atgcaacaag ttaaggccac gggaagtccg gttctggatg tggcgcataa ctttgttagc
      241 gcgtgtcaaa tcggcgtcaa cagggctggt tgcatcgtaa aggtgccacg ccggatgaca
      301 acggtctggt gattattccc ggttcacgtg gtgattactc ctggattgta cagcctgttg
      361 cgaacgaaaa aacgctccac tcgctggcgc atggggcagg gcgtaaatgg gggcgcaccg
      421 agtgtaaatg gcgtctggca gcgaaataca cggtgacgca actctcgcgg actgaacttg
      481 gcagtcggat aatttgtcgc gataaacaac tcatctttga agaagcgcca caagcctata
      541 aatcggctga aagcgtggtg caatgtctgg tgcaggccgg tttaattatt cctgtcgcgc
      601 ggctgcgtcc ggtgctaacg ctcaaaaaca gtggagggaa aaaaggatga tcttgctaca
      661 actctcctca gcgcaggggc cggaagaatg ttgtctcgca gtgaaaaagg cgctggacag
      721 gctaattaaa gaagctgccc gacaagacgt cgcggtaacg gtgttggaaa cagaaacggg
      781 ccgctactct gacacgctgc gttcagctct ggtttctctg gatggcgata acgcatgggc
      841 attaagcgaa agctggtgtg gcactattca gtggatttgt ccgagtccgt atcggcctca
      901 tcatgggcgc aaaaactggt ttctgggcat tgggcgtttt accgctgatg agcaggagca
      961 atccgatgcg atccggtatg agacgctgcg ttcgtcgggg ccgggcggtc aacatgtcaa
     1021 taaaaccgac tcggcggtac gcgccacgca tttggcatcc ggtattagcg tgaaggttca
     1081 gtcagagcgt agtcagcatg ctaacaagcg gctggcacga ttgctgattg cctggaagct
     1141 ggagcagcag caacaggaaa atagcgcggt gctgaaatcg cagcggcgaa tgttccatca
     1201 ccagattgaa cgtggcaacc cgagacggac atttacaggg atggctttta tcgaaggata
     1261 atgaaggatg aaactgccgg aaggcgatta aacgccatcc ggcagcaaat caaataatta
     1321 cttcgccgga atttctttca gcagttcagt cagcagtgtc cagtaatgac ctacgctttc
     1381 gatgtgaact tgctcatccg gagagtgtgg accggtgata gttggcccga tagaaaccat
     1441 gtccatttcc ggatacggtt ttttgaacag accacattcc aggcccgcgt ggataatctg
     1501 gatgttcggc gtcttgttga acaggcgctg ataggtttca cgtaccagat gcatcaccgg
     1561 agaattagcg tccggctgcc agccaggata tgcgcctttc gcttcggttt tcgcgccagc
     1621 cagtttaccc agcgaatcca gcatgctcac cacgtagtct ttaccgctgt cgatcagtga
     1681 acggatcagg cagtgaattt ctacgttatt gtcagtcatg gtcaccacac cgacgttcag
     1741 ggaggtttca accacacctt tggctacatc ggagttgcgg atcacaccgt tcggggtggc
     1801 gttcagcaga cgaataaagg tatcgcgaga tttcgcaatc agggcagctt tatcgttcgc
     1861 tacagagtcc agcaacaagg ccagattttt ctctttctct gccagctcgt ttttcaggat
     1921 ctcctgatag gtattcacca gagatttcag tgcgtcgact ttatcagctg cgacagcaat
     1981 ggtcgcaaag gcttcacgcg ggatggcgtt acgcagtgtg ccgccgttga aatcgataag
     2041 gcgcaggtcc agttcttctg catgacccgc caggaagcgc accagcagtt tgttggcatt
     2101 acccaggcca acgtggattt caccgccgga gtgaccgcct ttcagacctt ttaaggttaa
     2161 cttgaaggtt tcaaaaccag ctggaaccgc ttcacgatct aaatgcaggt tggaggtgaa
     2221 gtcgataccc cccgcacaac ccatgtagat ttcaccttct tcttcggagt cggtgttaat
     2281 cagaatatca gcctgcaacc agttgctctg taagccaaaa gcaccgtcca taccggcttc
     2341 ttcggtcatg gtcagcagca cttccagcgg accgtgaacc acgttttcgt cagccagaac
     2401 cgccagtgca gaggccatac caatgccgtt atccgcaccc agcgtggtgc cgcgcgcttt
     2461 aacccattcg ccatcaatat aaggctggat aggatctttc gtgaagtcat gcacggtgtc
     2521 gttatttttc tgcggcacca tatcgaggtg ggcctgtaag acgaccggtt tacgattttc
     2581 catacctgcg gtagcaggtt tacgaatcag gatattacct acctgatcgc gttcgacatg
     2641 gaaacctttc tcttttgccc aaccaacaat gtattcagcg agttgctctt catgatagga
     2701 cgggtgcgga atagaacaga ttttggcaaa aatatcccac agcggctgtg gagataattg
     2761 agacagttca gacacgttaa gtctccttgt cgatcacccg caaaacagta ttgcaggtca
     2821 cagggttagc agaaaatgtt gtcaacacaa gacaggcttg cgagatatgt ttgagaatac
     2881 cactttatcc cgcgtcaggg agaggcagtg cgtaaaaaga cgcggactca tgtgaaatac
     2941 tggtttttag tgcgccagat ctctataatc tcgcgcaacc tattttcccc tcgaacactt
     3001 tttaagccgt agataaacag gctgggacac ttcacatgag cgaaaaatac atcgtcacct
     3061 gggacatgtt gcagatccat gcacgtaaac tcgcaagccg actgatgcct tctgaacaat
     3121 ggaaaggcat tattgccgta agccgtggcg gtctggtacc gggtgcgtta ctggcgcgtg
     3181 aactgggtat tcgtcatgtc gataccgttt gtatttccag ctacgatcac gacaaccagc
     3241 gagagcttaa agtgctgaaa cgcgcagaag gcgatggcga aggcttcata gttattgatg
     3301 acctggtgga taccggtggt actgctgttg cgattcgtga aatgtatcca aaagcgcact
     3361 ttgtcaccat cttcgcaaaa ccggctggtc gtccgctggt tgatgactat gttgttgata
     3421 ttccgcaaga tacccggatc gaacagccgt gggatatggg cgtcgtattc gtccc
//
LOCUS       DADMJE010000404         3475 bp    DNA     linear   BCT 06-MAR-2021
DEFINITION  TPA_asm: Shigella boydii strain H111840194
            SAMEA1570755-rid11410333.guided.252, whole genome shotgun sequence.
ACCESSION   DADMJE010000404 DADMJE010000000
VERSION     DADMJE010000404.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMEA1570755
            Sequence Read Archive: ERR205843
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Shigella boydii
  ORGANISM  Shigella boydii
            Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
            Enterobacteriaceae; Shigella.
REFERENCE   1  (bases 1 to 3475)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3475)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (26-JAN-2021) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 26-JAN-2021
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT000941071.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT000941071.1
            Genome Coverage       :: 70x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 01/27/2021 03:55:25
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2020-02-06.build4373
            Genes (total)                     :: 4,380
            CDSs (total)                      :: 4,305
            Genes (coding)                    :: 3,978
            CDSs (with protein)               :: 3,978
            Genes (RNA)                       :: 75
            rRNAs                             :: 1, 1, 1 (5S, 16S, 23S)
            complete rRNAs                    :: 1 (23S)
            partial rRNAs                     :: 1, 1 (5S, 16S)
            tRNAs                             :: 65
            ncRNAs                            :: 7
            Pseudo Genes (total)              :: 327
            CDSs (without protein)            :: 327
            Pseudo Genes (ambiguous residues) :: 0 of 327
            Pseudo Genes (frameshifted)       :: 181 of 327
            Pseudo Genes (incomplete)         :: 94 of 327
            Pseudo Genes (internal stop)      :: 92 of 327
            Pseudo Genes (multiple problems)  :: 37 of 327
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3475
                     /organism="Shigella boydii"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMEA1570755-rid11410333.guided.252"
                     /strain="H111840194"
                     /db_xref="taxon:621"
     gene            163..650
                     /locus_tag="JN001_004377"
                     /pseudo
     CDS             163..650
                     /locus_tag="JN001_004377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001341229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="rtcB domain protein"
     gene            647..1261
                     /locus_tag="JN001_004378"
     CDS             647..1261
                     /locus_tag="JN001_004378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000602105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor H"
                     /protein_id="HAY9055338.1"
                     /translation="MILLQLSSAQGPEECCLAVKKALDRLIKEAARQDVAVTVLETET
                     GRYSDTLRSALVSLDGDNAWALSESWCGTIQWICPSPYRPHHGRKNWFLGIGRFTADE
                     QEQSDAIRYETLRSSGPGGQHVNKTDSAVRATHLASGISVKVQSERSQHANKRLARLL
                     IAWKLEQQQQENSAVLKSQRRMFHHQIERGNPRRTFTGMAFIEG"
     gene            complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="JN001_004379"
     CDS             complement(1318..2775)
                     /gene="pepD"
                     /locus_tag="JN001_004379"
                     /EC_number="3.4.13.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008783788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosol nonspecific dipeptidase"
                     /protein_id="HAY9055339.1"
                     /translation="MSELSQLSPQPLWDIFAKICSIPHPSYHEEQLAEYIVGWAKEKG
                     FHVERDQVGNILIRKPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDG
                     EWVKARGTTLGADNGIGMASALAVLADENVVHGPLEVLLTMTEEAGMDGAFGLQSNWL
                     QADILINTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGFETFKLTLKGLKGGHSGG
                     EIHVGLGNANKLLVRFLAGHAEELDLRLIDFNGGTLRNAIPREAFATIAVAADKVDAL
                     KSLVNTYQEILKNELAEKEKNLALLLDSVANDKAALIAKSRDTFIRLLNATPNGVIRN
                     SDVAKGVVETSLNVGVVTMTDNNVEIHCLIRSLIDSGKDYVVSMLDSLGKLAGAKTEA
                     KGAYPGWQPDANSPVMHLVRETYQRLFNKTPNIQIIHAGLECGLFKKPYPEMDMVSIG
                     PTITGPHSPDEQVHIESVGHYWTLLTELLKEIPAK"
     gene            3036..>3475
                     /gene="gpt"
                     /locus_tag="JN001_004380"
     CDS             3036..>3475
                     /gene="gpt"
                     /locus_tag="JN001_004380"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_308292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HAY9055340.1"
                     /translation="MSEKYIVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGA
                     LLARELGIRHVDTVCISSYDHDNQRELKVLKRAEGDGEGFIVIDDLVDTGGTAVAIRE
                     MYPKAHFVTIFAKPAGRPLVDDYVVDIPQDTWIEQPWDMGVVFVP"
BASE COUNT          846 a          854 c          935 g          840 t
ORIGIN      
        1 caccccatta taaggggtac gaataaagta acggggcagt ctattttaca gcggcatatt
       61 gcctcgttct cgcatcatgg tttgcctcaa ggcagtgacg acgcgctacg gtatattgcg
      121 gaacatgacg atgcgctggc gtttgcgtgt attaatcgcc agatgatcgc tttgcgcata
      181 atgcaacaag ttaaggccac gggaagtccg gttctggatg tggcgcataa ctttgttagc
      241 gcgtgtcaaa tcggcgtcaa cagggctggt tgcatcgtaa aggtgccacg ccggatgaca
      301 acggtctggt gattattccc ggttcacgtg gtgattactc ctggattgta cagcctgttg
      361 cgaacgaaaa aacgctccac tcgctggcgc atggggcagg gcgtaaatgg gggcgcaccg
      421 agtgtaaatg gcgtctggca gcgaaataca cggtgacgca actctcgcgg actgaacttg
      481 gcagtcggat aatttgtcgc gataaacaac tcatctttga agaagcgcca caagcctata
      541 aatcggctga aagcgtggtg caatgtctgg tgcaggccgg tttaattatt cctgtcgcgc
      601 ggctgcgtcc ggtgctaacg ctcaaaaaca gtggagggaa aaaaggatga tcttgctaca
      661 actctcctca gcgcaggggc cggaagaatg ttgtctcgca gtgaaaaagg cgctggacag
      721 gctaattaaa gaagctgccc gacaagacgt cgcggtaacg gtgttggaaa cagaaacggg
      781 ccgctactct gacacgctgc gttcagctct ggtttctctg gatggcgata acgcatgggc
      841 attaagcgaa agctggtgtg gcactattca gtggatttgt ccgagtccgt atcggcctca
      901 tcatgggcgc aaaaactggt ttctgggcat tgggcgtttt accgctgatg agcaggagca
      961 atccgatgcg atccggtatg agacgctgcg ttcgtcgggg ccgggcggtc aacatgtcaa
     1021 taaaaccgac tcggcggtac gcgccacgca tttggcatcc ggtattagcg tgaaggttca
     1081 gtcagagcgt agtcagcatg ctaacaagcg gctggcacga ttgctgattg cctggaagct
     1141 ggagcagcag caacaggaaa atagcgcggt gctgaaatcg cagcggcgaa tgttccatca
     1201 ccagattgaa cgtggcaacc cgagacggac atttacaggg atggctttta tcgaaggata
     1261 atgaaggatg aaactgccgg aaggcgatta aacgccatcc ggcagcaaat caaataatta
     1321 cttcgccgga atttctttca gcagttcagt cagcagtgtc cagtaatgac ctacgctttc
     1381 gatgtgaact tgctcatccg gagagtgtgg accggtgata gttggcccga tagaaaccat
     1441 gtccatttcc ggatacggtt ttttgaacag accacattcc aggcccgcgt ggataatctg
     1501 gatgttcggc gtcttgttga acaggcgctg ataggtttca cgtaccagat gcatcaccgg
     1561 agaattagcg tccggctgcc agccaggata tgcgcctttc gcttcggttt tcgcgccagc
     1621 cagtttaccc agcgaatcca gcatgctcac cacgtagtct ttaccgctgt cgatcagtga
     1681 acggatcagg cagtgaattt ctacgttatt gtcagtcatg gtcaccacac cgacgttcag
     1741 ggaggtttca accacacctt tggctacatc ggagttgcgg atcacaccgt tcggggtggc
     1801 gttcagcaga cgaataaagg tatcgcgaga tttcgcaatc agggcagctt tatcgttcgc
     1861 tacagagtcc agcaacaagg ccagattttt ctctttctct gccagctcgt ttttcaggat
     1921 ctcctgatag gtattcacca gagatttcag tgcgtcgact ttatcagctg cgacagcaat
     1981 ggtcgcaaag gcttcacgcg ggatggcgtt acgcagtgtg ccgccgttga aatcgataag
     2041 gcgcaggtcc agttcttctg catgacccgc caggaagcgc accagcagtt tgttggcatt
     2101 acccaggcca acgtggattt caccgccgga gtgaccgcct ttcagacctt ttaaggttaa
     2161 cttgaaggtt tcaaaaccag ctggaaccgc ttcacgatct aaatgcaggt tggaggtgaa
     2221 gtcgataccc cccgcacaac ccatgtagat ttcaccttct tcttcggagt cggtgttaat
     2281 cagaatatca gcctgcaacc agttgctctg taagccaaaa gcaccgtcca taccggcttc
     2341 ttcggtcatg gtcagcagca cttccagcgg accgtgaacc acgttttcgt cagccagaac
     2401 cgccagtgca gaggccatac caatgccgtt atccgcaccc agcgtggtgc cgcgcgcttt
     2461 aacccattcg ccatcaatat aaggctggat aggatctttc gtgaagtcat gcacggtgtc
     2521 gttatttttc tgcggcacca tatcgaggtg ggcctgtaag acgaccggtt tacgattttc
     2581 catacctgcg gtagcaggtt tacgaatcag gatattacct acctgatcgc gttcgacatg
     2641 gaaacctttc tcttttgccc aaccaacaat gtattcagcg agttgctctt catgatagga
     2701 cgggtgcgga atagaacaga ttttggcaaa aatatcccac agcggctgtg gagataattg
     2761 agacagttca gacacgttaa gtctccttgt cgatcacccg caaaacagta ttgcaggtca
     2821 cagggttagc agaaaatgtt gtcaacacaa gacaggcttg cgagatatgt ttgagaatac
     2881 cactttatcc cgcgtcaggg agaggcagtg cgtaaaaaga cgcggactca tgtgaaatac
     2941 tggtttttag tgcgccagat ctctataatc tcgcgcaacc tattttcccc tcgaacactt
     3001 tttaagccgt agataaacag gctgggacac ttcacatgag cgaaaaatac atcgtcacct
     3061 gggacatgtt gcagatccat gcacgtaaac tcgcaagccg actgatgcct tctgaacaat
     3121 ggaaaggcat tattgccgta agccgtggcg gtctggtacc gggtgcgtta ctggcgcgtg
     3181 aactgggtat tcgtcatgtc gataccgttt gtatttccag ctacgatcac gacaaccagc
     3241 gagagcttaa agtgctgaaa cgcgcagaag gcgatggcga aggcttcata gttattgatg
     3301 acctggtgga taccggtggt actgctgttg cgattcgtga aatgtatcca aaagcgcact
     3361 ttgtcaccat cttcgcaaaa ccggctggtc gtccgctggt tgatgactat gttgttgata
     3421 ttccgcaaga tacctggatc gaacagccgt gggatatggg cgtcgtattc gtccc
//
